MYORG_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|QSKEQPNQLM

***** No hits found ******


2|SequenceR|15|6|RRPYAQSKEQ

>sp|CAS5B_SACS2|CRISPR-ASSOCIATED protein Cas5 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RRPYAQSKEQ 10
R PY QSK +
Sbjct: 91 RVPYRQSKNR 100




3|SequenceR|20|11|CGPRRRRPYA

>sp|RL18E_SACS2|LARGE ribosomal subunit protein eL18|Saccharolobus solfataricus (strain

Query: 3 PRRRRPY 9
P R+RPY
Sbjct: 36 PSRKRPY 42


>sp|RL18E_SULTO|LARGE ribosomal subunit protein eL18|Sulfurisphaera tokodaii (strain

Query: 3 PRRRRPY 9
P R+RPY
Sbjct: 37 PSRQRPY 43


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 2 GPRRRR 7
GPR+RR
Sbjct: 512 GPRKRR 517


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CGPRRRRP 8
C PR+R P
Sbjct: 282 CAPRQRAP 289


>sp|RL18E_SULAC|LARGE ribosomal subunit protein eL18|Sulfolobus acidocaldarius (strain

Query: 2 GPRRRRPY 9
PRR+R Y
Sbjct: 34 APRRKRAY 41


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 CGPRRRRP 8
CG R RRP
Sbjct: 1055 CGERYRRP 1062


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CGPRRRRP 8
CG + RRP
Sbjct: 1069 CGEKFRRP 1076


>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 2 GPRRRRPY 9
G RR+RP+
Sbjct: 160 GKRRKRPF 167




4|SequenceR|25|16|QRYAYCGPRR

>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QRYAYCGPRR 10
Q Y Y GP R
Sbjct: 341 QTYIYMGPSR 350


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QRYAYCGPRR 10
Q Y Y GP R
Sbjct: 341 QTYIYMGPSR 350


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QRYAYCGPRR 10
Q Y Y GP R
Sbjct: 341 QTYIYMGPSR 350


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RYAYCGPR 9
RYAY PR
Sbjct: 439 RYAYLDPR 446


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 QRYAYCGPRR 10
Q Y Y GP R
Sbjct: 341 QTYIYMGPTR 350


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QRYAYCGPRR 10
Q Y Y GP R
Sbjct: 341 QTYIYMGPTR 350


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YAYCGPR 9
YAY GP+
Sbjct: 324 YAYVGPK 330


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YAYCGP 8
Y YCGP
Sbjct: 362 YFYCGP 367


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YAYCGP 8
Y YCGP
Sbjct: 362 YFYCGP 367


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RYAYCGPR 9
RY Y PR
Sbjct: 437 RYTYLSPR 444


>sp|SYY1_PYRAE|TYROSINE--TRNA ligase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 AYCGPR 9
AYC PR
Sbjct: 272 AYCPPR 277


>sp|SYY_PYRAR|TYROSINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 AYCGPR 9
AYC PR
Sbjct: 272 AYCPPR 277


>sp|SYY_PYRCJ|TYROSINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 AYCGPR 9
AYC PR
Sbjct: 272 AYCPPR 277


>sp|SYY2_PYRAE|TYROSINE--TRNA ligase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 AYCGPR 9
AYC PR
Sbjct: 245 AYCPPR 250


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QRYAYCGPRR 10
QRYA+ P R
Sbjct: 412 QRYAHMLPER 421


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YAYCGP 8
+ YCGP
Sbjct: 362 FFYCGP 367


>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QRYAYCGPRR 10
QRYA+ P R
Sbjct: 411 QRYAHMLPER 420




5|SequenceR|30|21|IAEPNQRYAY

>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IAEPNQRY 8
+ EPN++Y
Sbjct: 149 VVEPNEKY 156


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IAEPNQRY 8
IA PN RY
Sbjct: 370 IAHPNSRY 377


>sp|MTRA_METMS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanohalophilus mahii (strain

Query: 1 IAEPNQRY 8
IA PN RY
Sbjct: 67 IANPNIRY 74


>sp|Y1656_ARCFU|UNCHARACTERIZED protein AF_1656|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AEPNQRYAY 10
+PN+ Y+Y
Sbjct: 62 GKPNEEYSY 70




6|SequenceR|35|26|MAAAAIAEPN

>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 MAAAAIAEPN 10
+ AAA EPN
Sbjct: 209 LQAAAFVEPN 218




7|SequenceR|40|31|PLFTYMAAAA

>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PLFTYMAAAA 10
P FTY AA
Sbjct: 237 PAFTYARVAA 246




8|SequenceR|45|36|PSFNDPLFTY

>sp|AMT1_METJA|AMMONIUM transporter Amt1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SFNDPLFT 9
S NDPL+T
Sbjct: 245 SRNDPLYT 252


>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii (strain

Query: 4 NDPLFTY 10
+DPLF Y
Sbjct: 439 HDPLFVY 445


>sp|CBID_METST|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 PSFNDPLFT 9
P++NDP T
Sbjct: 82 PNYNDPDVT 90


>sp|KAE1_NANEQ|TRNA N6-adenosine threonylcarbamoyltransferase|Nanoarchaeum equitans

Query: 5 DPLFTY 10
DPLF Y
Sbjct: 122 DPLFVY 127


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 FNDPLFTY 10
F+DP F Y
Sbjct: 321 FDDPAFDY 328


>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 3 FNDPLFTY 10
F+DP F Y
Sbjct: 320 FDDPAFDY 327


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FNDPLFTY 10
F+DP F Y
Sbjct: 320 FDDPAFDY 327


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PSFNDPLFT 9
P F+D LF+
Sbjct: 700 PGFSDKLFS 708


>sp|Y1309_STAMF|PROTEIN Smar_1309|Staphylothermus marinus (strain ATCC 43588

Query: 2 SFNDPLF 8
+FNDP F
Sbjct: 94 AFNDPRF 100




9|SequenceR|50|41|PKPKAPSFND

>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 PKPKAPS 7
PKPK PS
Sbjct: 537 PKPKKPS 543


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC

Query: 1 PKPKAP 6
PKPK P
Sbjct: 21 PKPKGP 26


>sp|SRP54_THEAC|SIGNAL recognition particle 54 kDa|Thermoplasma acidophilum (strain ATCC

Query: 3 PKAPSFND 10
P+A +FND
Sbjct: 225 PEAKAFND 232


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KPKAPSF 8
KPK PS+
Sbjct: 228 KPKVPSY 234


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PKPKAPSFND 10
P PK FND
Sbjct: 409 PSPKEAIFND 418


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PKPKAP 6
P+PKAP
Sbjct: 100 PQPKAP 105


>sp|GGGPS_STAMF|GERANYLGERANYLGLYCERYL phosphate synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PKPKAPSF 8
PKP PSF
Sbjct: 180 PKPVPPSF 187


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 PKPKAP 6
P+PKAP
Sbjct: 96 PQPKAP 101


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 KPKAPSFND 10
K PSFND
Sbjct: 239 KAYVPSFND 247


>sp|Y934_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0934|Methanocaldococcus jannaschii

Query: 1 PKPKAP 6
PKPK P
Sbjct: 119 PKPKTP 124




10|SequenceR|55|46|KLDKSPKPKA

>sp|RADB_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 1 KLDKSPKP 8
+LDK PKP
Sbjct: 181 RLDKLPKP 188


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LDKSPKPK 9
LDK+P+P+
Sbjct: 445 LDKAPEPE 452


>sp|Y1545_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1545|Methanocaldococcus

Query: 2 LDKSPKPKA 10
LDKSP KA
Sbjct: 99 LDKSPSMKA 107


>sp|DGGGP_METM6|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 1 KLDKSPKPK 9
K+DK KPK
Sbjct: 64 KIDKINKPK 72




11|SequenceR|60|51|SGLLPKLDKS

>sp|GGR_METAR|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 SGLLPKL 7
SG+LPKL
Sbjct: 263 SGMLPKL 269


>sp|ARGB_METLZ|ACETYLGLUTAMATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GLLPKLDKS 10
G++PKL+ S
Sbjct: 244 GMIPKLEAS 252




12|SequenceR|65|56|LGLVASGLLP

>sp|HMGCS_METVS|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LGLVASGLL 9
+GLV+SG++
Sbjct: 125 MGLVSSGMM 133


>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 1 LGLVASGLL 9
+GLV SGL+
Sbjct: 125 MGLVGSGLI 133


>sp|HMGCS_METAR|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LGLVASGL 8
+G+VASGL
Sbjct: 123 MGVVASGL 130


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 1 LGLVASGLL 9
LGL+A+GL+
Sbjct: 170 LGLMAAGLV 178


>sp|GLYA_HALLT|SERINE hydroxymethyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 2 GLVASGLLP 10
GLVA+G+ P
Sbjct: 205 GLVAAGVHP 213


>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGLVASGLL 9
+GLV SGL+
Sbjct: 123 MGLVESGLI 131


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 LGLVASGL 8
L LVASGL
Sbjct: 548 LALVASGL 555


>sp|HMGCS_METM6|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C6 /

Query: 1 LGLVASGLL 9
+GLV SG++
Sbjct: 125 MGLVGSGMM 133


>sp|HMGCS_METKA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 GLVASGLL 9
GLVASG++
Sbjct: 129 GLVASGMI 136


>sp|PHAC_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula marismortui (strain ATCC 43049

Query: 1 LGLVASGL 8
LGL+A+GL
Sbjct: 182 LGLMAAGL 189


>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 1 LGLVASGL 8
LGL+A+GL
Sbjct: 182 LGLMAAGL 189


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 2 GLVASGLLP 10
GLVA+G+ P
Sbjct: 203 GLVAAGVHP 211


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LGLVASGLL 9
+GLV+SG++
Sbjct: 124 MGLVSSGMI 132


>sp|PUR2_METS3|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LGLVASG 7
LG+VASG
Sbjct: 385 LGIVASG 391


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LGLVASGLL 9
+GLVASG++
Sbjct: 135 IGLVASGVV 143


>sp|ARGB_METM5|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 GLVASGLLP 10
GL+ G++P
Sbjct: 242 GLITGGMIP 250


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGLVASGLL 9
LG+VASG +
Sbjct: 16 LGVVASGCI 24


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LGLVASGLLP 10
+GLV +GL P
Sbjct: 239 VGLVETGLTP 248


>sp|RPIA_METAC|RIBOSE-5-PHOSPHATE isomerase A|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GLVASGLL 9
GLV+SG+L
Sbjct: 22 GLVSSGML 29


>sp|ARGB_METMP|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GLVASGLLP 10
GL+ G++P
Sbjct: 242 GLITGGMIP 250


>sp|HMGCS_METAC|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LGLVASGLL 9
+GLV SG++
Sbjct: 124 MGLVGSGMI 132




13|SequenceR|70|61|ALVLLLGLVA

***** No hits found ******


14|SequenceR|75|66|WAVVAALVLL

>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WAVVAALVLL 10
W ++AA+++L
Sbjct: 144 WGIIAAVLIL 153




15|SequenceR|80|71|VSYYCWAVVA

>sp|UPPP_METTH|UNDECAPRENYL-DIPHOSPHATASE thermautotrophicus (strain ATCC 29096

Query: 2 SYYCWAV 8
+YYCWA+
Sbjct: 165 AYYCWAL 171


>sp|UPPP_METS3|UNDECAPRENYL-DIPHOSPHATASE smithii (strain ATCC 35061

Query: 2 SYYCWAV 8
+YYCW V
Sbjct: 258 AYYCWIV 264


>sp|Y114_METTH|UNCHARACTERIZED protein MTH_114|Methanothermobacter thermautotrophicus (strain

Query: 4 YCWAV 8
YCW V
Sbjct: 19 YCWGV 23


>sp|TRUD2_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii

Query: 2 SYYCWA 7
S YCW
Sbjct: 19 SLYCWG 24


>sp|Y196_THEAC|PUTATIVE ankyrin repeat protein Ta0196|Thermoplasma acidophilum (strain ATCC

Query: 5 CWAVV 9
CWAV+
Sbjct: 121 CWAVI 125




16|SequenceR|85|76|AKRLSVSYYC

>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 KRLSVSYYC 10
K+LS+SY C
Sbjct: 617 KQLSISYLC 625


>sp|UPPP_METBU|UNDECAPRENYL-DIPHOSPHATASE burtonii (strain DSM 6242

Query: 1 AKRLSVSYYC 10
AK++ SY+C
Sbjct: 243 AKKVDFSYFC 252


>sp|GATE_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 1 AKRLSVSYY 9
AK++ +SYY
Sbjct: 474 AKKMVLSYY 482


>sp|SPEE_PYRAB|POLYAMINE aminopropyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 AKRLSVSYY 9
AK+L++ YY
Sbjct: 250 AKKLNLKYY 258


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AKRLSVSYY 9
AK+L + YY
Sbjct: 251 AKKLQLEYY 259


>sp|Y042_METJA|UNCHARACTERIZED protein MJ0042|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 SVSYYC 10
SVS+YC
Sbjct: 115 SVSHYC 120


>sp|HDRB_METKA|COB--COM heterodisulfide reductase subunit B|Methanopyrus kandleri (strain

Query: 2 KRLSVSYYC 10
K+L V +YC
Sbjct: 264 KKLPVFHYC 272




17|SequenceR|90|81|ARLREAKRLS

>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LREAKRLS 10
LREAK+L+
Sbjct: 360 LREAKKLT 367


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 2 RLREAKRL 9
RL+EAK+L
Sbjct: 601 RLKEAKKL 608


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 3 LREAKRL 9
+REAKRL
Sbjct: 479 IREAKRL 485




18|SequenceR|95|86|LDLLEARLRE

>sp|SERK_DESA1|ATP-DEPENDENT L-serine kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 DLLEARLRE 10
+L+EARLRE
Sbjct: 37 ELVEARLRE 45


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 1 LDLLEARLRE 10
DLLE++LRE
Sbjct: 93 FDLLESKLRE 102


>sp|Y376_METTP|UPF0282 protein Mthe_0376|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DLLEARLRE 10
DLLEAR +E
Sbjct: 271 DLLEARRKE 279


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain

Query: 1 LDLLEARLRE 10
D LEARL+E
Sbjct: 14 FDGLEARLKE 23


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 1 LDLLEARLRE 10
+DL E++LRE
Sbjct: 111 VDLNESKLRE 120


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 LDLLEARLRE 10
D LEARL+E
Sbjct: 14 FDGLEARLKE 23


>sp|EF1B_THEGJ|ELONGATION factor 1-beta|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LDLLEARLRE 10
LD LEA+L+E
Sbjct: 21 LDELEAKLKE 30


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 2 DLLEARLRE 10
+L++ARLRE
Sbjct: 37 ELVDARLRE 45




19|SequenceR|100|91|FGGAKLDLLE

>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 1 FGGAKLDL 8
+GGAK+D+
Sbjct: 58 YGGAKMDM 65


>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 2 GGAKLDLLE 10
GG+K+DL E
Sbjct: 158 GGSKVDLKE 166


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 1 FGGAKLDLLE 10
GG+K+DL E
Sbjct: 157 LGGSKVDLNE 166


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GGAKLDLLE 10
GG LDL+E
Sbjct: 165 GGMYLDLIE 173


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FGGAKLDLLE 10
+ GAKL LLE
Sbjct: 98 YWGAKLALLE 107




20|SequenceR|105|96|QNRISFGGAK

>sp|TRUD_ARCFU|PROBABLE tRNA pseudouridine synthase D|Archaeoglobus fulgidus (strain ATCC

Query: 1 QNRISFGGAK 10
Q RISF G K
Sbjct: 71 QKRISFAGTK 80


>sp|PSA_METVS|PROTEASOME subunit alpha|Methanococcus vannielii (strain ATCC 35089

Query: 2 NRISFGGA 9
NRIS+G A
Sbjct: 101 NRISYGEA 108


>sp|PSA_METM6|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C6 /

Query: 2 NRISFGGA 9
NRIS+G A
Sbjct: 101 NRISYGEA 108


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 3 RISFGGAK 10
RIS GG K
Sbjct: 386 RISLGGVK 393


>sp|PSA_METM5|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C5 /

Query: 2 NRISFGGA 9
NRIS+G A
Sbjct: 101 NRISYGEA 108


>sp|PSA_METM7|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C7 /

Query: 2 NRISFGGA 9
NRIS+G A
Sbjct: 101 NRISYGEA 108


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RISFGGAK 10
RIS GGA+
Sbjct: 239 RISIGGAQ 246


>sp|Y2160_ARCFU|UNCHARACTERIZED protein AF_2160|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NRISFGGA 9
+ +SFGGA
Sbjct: 83 DSLSFGGA 90




21|SequenceR|110|101|VQEGKQNRIS

>sp|ALBA1_SULTO|DNA/RNA-BINDING protein Alba 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QEGKQNRIS 10
Q+G+Q+R+S
Sbjct: 81 QDGRQSRVS 89


>sp|ALBA_METS5|DNA/RNA-BINDING protein Alba|Metallosphaera sedula (strain ATCC 51363

Query: 2 QEGKQNRIS 10
Q+G+Q+R+S
Sbjct: 80 QDGRQSRVS 88


>sp|ALBA1_SACSH|DNA/RNA-BINDING protein Alba 1|Saccharolobus shibatae (strain ATCC 51178

Query: 2 QEGKQNRIS 10
Q+G+Q+R+S
Sbjct: 80 QDGRQSRVS 88


>sp|ALBA1_SACS2|DNA/RNA-BINDING protein Alba 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QEGKQNRIS 10
Q+G+Q+R+S
Sbjct: 80 QDGRQSRVS 88


>sp|ALBA1_SACI5|DNA/RNA-BINDING protein Alba 1|Saccharolobus islandicus (strain REY15A)

Query: 2 QEGKQNRIS 10
Q+G+Q+R+S
Sbjct: 80 QDGRQSRVS 88


>sp|ALBA_SULAC|DNA/RNA-BINDING protein Alba|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QEGKQNRIS 10
Q+G+Q+R+S
Sbjct: 79 QDGRQSRVS 87


>sp|RS19_SULAC|SMALL ribosomal subunit protein uS19|Sulfolobus acidocaldarius (strain

Query: 2 QEGKQNRI 9
+EGKQN++
Sbjct: 62 REGKQNKV 69


>sp|MRE11_THEAC|DNA double-strand break repair protein|Thermoplasma acidophilum (strain

Query: 1 VQEGKQNRI 9
++EG +NRI
Sbjct: 147 IEEGYRNRI 155




22|SequenceR|115|106|FALRFVQEGK

>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FALRFVQEGK 10
F +FVQ+GK
Sbjct: 413 FEKKFVQQGK 422


>sp|Y342_METJA|UNCHARACTERIZED protein MJ0342|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FALRFVQEG 9
+ LRFV+EG
Sbjct: 54 YGLRFVKEG 62


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FALRFVQEGK 10
F RFVQ+G+
Sbjct: 406 FERRFVQQGR 415


>sp|KPYK_THEAC|PYRUVATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FALRFVQEGK 10
FAL FVQ+ +
Sbjct: 172 FALSFVQKSE 181


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FALRFVQEGK 10
F RFV++GK
Sbjct: 406 FENRFVRQGK 415


>sp|PYRH_THEON|URIDYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 FALRFVQEGK 10
A +F+Q GK
Sbjct: 187 LAAKFIQRGK 196


>sp|PYRH_THEKO|URIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FALRFVQEGK 10
A +F+Q GK
Sbjct: 187 LAAKFIQRGK 196


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LRFVQEGK 10
++F++EGK
Sbjct: 553 IKFIKEGK 560


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 FALRFVQEGK 10
F L+F + GK
Sbjct: 176 FLLKFAESGK 185


>sp|Y586_ARCFU|UNCHARACTERIZED protein AF_0586|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FALRFVQE 8
FA+RF++E
Sbjct: 23 FAVRFIEE 30




23|SequenceR|120|111|LAGSRFALRF

>sp|Y636_PYRAB|UPF0179 protein PYRAB06360|Pyrococcus abyssi (strain GE5 /

Query: 1 LAGSRFALRF 10
+AGS+ LRF
Sbjct: 84 IAGSKLTLRF 93


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GSRFALRF 10
G RF LRF
Sbjct: 132 GGRFILRF 139


>sp|IDI2_PYRFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GSRFALRF 10
G R ALRF
Sbjct: 245 GKRLALRF 252


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GSRFALRF 10
G RF LRF
Sbjct: 132 GGRFILRF 139


>sp|SYS_KORCO|SERINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LAGSRFALRF 10
LAGSRF F
Sbjct: 180 LAGSRFFYLF 189


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LAGSRFALR 9
+AG RFA+R
Sbjct: 97 VAGKRFAVR 105


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GSRFALRF 10
G RF LRF
Sbjct: 132 GGRFILRF 139




24|SequenceR|125|116|CSDLDLAGSR

>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DLDLAGSR 10
D+DL+GSR
Sbjct: 19 DVDLSGSR 26


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC 700922

Query: 1 CSDLDLAG 8
CSDL+L+G
Sbjct: 244 CSDLELSG 251


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 SDLDLAGSR 10
SDLD +G+R
Sbjct: 179 SDLDPSGTR 187


>sp|Y1496_METJA|UPF0127 protein MJ1496|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CSDLDL 6
CSD+DL
Sbjct: 97 CSDIDL 102


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SDLDLAGS 9
+D+DLAGS
Sbjct: 631 ADVDLAGS 638




25|SequenceR|130|121|AGDRSCSDLD

>sp|Y1775_ARCFU|PUTATIVE aminohydrolase AF_1775|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AGDRSCSDLD 10
AG++ C+D+D
Sbjct: 182 AGEKDCADVD 191


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 1 AGDRSCSDLD 10
GD SC+ LD
Sbjct: 72 GGDGSCNKLD 81


>sp|OGT_ARCFU|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 SCSDLD 10
SCSD+D
Sbjct: 127 SCSDID 132


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GDRSCS 7
GDR CS
Sbjct: 225 GDRECS 230


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 GDRSCSD 8
G R CSD
Sbjct: 421 GSRECSD 427


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 1 AGDRSCSD 8
AGD SC D
Sbjct: 200 AGDISCYD 207




26|SequenceR|135|126|SCGLLAGDRS

>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 1 SCGLLAGD 8
SCGL+AGD
Sbjct: 296 SCGLMAGD 303


>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CGLLAGD 8
CGL+AGD
Sbjct: 297 CGLMAGD 303


>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SCGLLAGDR 9
S G+LAGDR
Sbjct: 24 SLGVLAGDR 32


>sp|JAMM1_HALVD|DESAMPYLASE volcanii (strain ATCC 29605

Query: 2 CGLLAGD 8
CG+LAGD
Sbjct: 33 CGVLAGD 39


>sp|Y002_METMP|UPF0425 pyridoxal phosphate-dependent protein MMP0002|Methanococcus

Query: 3 GLLAGDRS 10
GLLAGD++
Sbjct: 218 GLLAGDKN 225


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 2 CGLLAGD 8
CGL+AG+
Sbjct: 297 CGLMAGE 303


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GLLAGDR 9
G+LAGDR
Sbjct: 28 GVLAGDR 34


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CGLLAGD 8
CGL+AG+
Sbjct: 297 CGLIAGE 303


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CGLLAGD 8
CGL+AG+
Sbjct: 298 CGLIAGE 304


>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GLLAGDR 9
GLL GDR
Sbjct: 28 GLLPGDR 34


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 1 SCGLLAGD 8
+CG++AG+
Sbjct: 296 ACGVMAGE 303


>sp|GCH3_PYRCJ|GTP cyclohydrolase III|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SCGLLAGD 8
SCG AGD
Sbjct: 100 SCGEAAGD 107


>sp|KHSE_THEVO|HOMOSERINE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GLLAGDR 9
GL++GDR
Sbjct: 208 GLMSGDR 214


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CGLLAGD 8
CG+ AGD
Sbjct: 84 CGIKAGD 90


>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 2 CGLLAGD 8
CG+ AGD
Sbjct: 84 CGIKAGD 90


>sp|MTBA_METAC|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina acetivorans (strain ATCC

Query: 2 CGLLAGD 8
CG+ AGD
Sbjct: 84 CGIKAGD 90


>sp|CDPAS_METB6|CDP-ARCHAEOL synthase|Methanoregula boonei (strain DSM 21154

Query: 2 CGLLAG 7
CG+LAG
Sbjct: 44 CGVLAG 49


>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 1 SCGLLAGDR 9
S GLL GDR
Sbjct: 61 SGGLLQGDR 69


>sp|RPO10_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfurisphaera tokodaii (strain DSM

Query: 1 SCGLLAGDR 9
+CG L GD+
Sbjct: 9 TCGSLIGDK 17


>sp|RL18_HALSA|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain

Query: 3 GLLAGDRS 10
GLLAG R+
Sbjct: 86 GLLAGQRA 93


>sp|RL18_HALS3|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain

Query: 3 GLLAGDRS 10
GLLAG R+
Sbjct: 86 GLLAGQRA 93


>sp|PT1_HALVD|PHOSPHOENOLPYRUVATE-PROTEIN phosphotransferase|Haloferax volcanii (strain ATCC 29605

Query: 2 CGLLAGD 8
CG +AGD
Sbjct: 498 CGEMAGD 504




27|SequenceR|140|131|GDATLSCGLL

>sp|SOXE_SULAC|SULFOCYANIN acidocaldarius (strain ATCC 33909

Query: 1 GDATLSCGLL 10
GD L CG+L
Sbjct: 165 GDYMLVCGIL 174


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 4 TLSCGLL 10
TL+CGLL
Sbjct: 152 TLACGLL 158


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GDATLSCGLL 10
GD LS GLL
Sbjct: 560 GDEELSTGLL 569


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 TLSCGLL 10
T+SCG+L
Sbjct: 12 TISCGIL 18


>sp|ENO_NATPD|ENOLASE pharaonis (strain ATCC 35678

Query: 1 GDATLSCG 8
GD TL CG
Sbjct: 292 GDRTLICG 299


>sp|ENO_HALWD|ENOLASE walsbyi (strain DSM 16790

Query: 1 GDATLSCG 8
GD TL CG
Sbjct: 294 GDQTLICG 301


>sp|ENO_HALMA|ENOLASE marismortui (strain ATCC 43049

Query: 1 GDATLSCG 8
GD TL CG
Sbjct: 294 GDQTLVCG 301


>sp|ENO_HALSA|ENOLASE salinarum (strain ATCC 700922

Query: 1 GDATLSCG 8
GD TL CG
Sbjct: 292 GDETLVCG 299


>sp|ENO_HALS3|ENOLASE salinarum (strain ATCC 29341

Query: 1 GDATLSCG 8
GD TL CG
Sbjct: 292 GDETLVCG 299


>sp|CDC69_HALSA|ORC1-TYPE DNA replication protein 9|Halobacterium salinarum (strain ATCC

Query: 1 GDATLSCGLL 10
GDA L+ G+L
Sbjct: 231 GDARLAIGIL 240


>sp|SPEH_META3|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus aeolicus (strain ATCC

Query: 2 DATLSCG 8
DAT SCG
Sbjct: 32 DATNSCG 38


>sp|Y658_METJA|UNCHARACTERIZED protein MJ0658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDATLSCGLL 10
GD LS G+L
Sbjct: 209 GDVDLSTGIL 218


>sp|KAE1B_THEAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 TLSCGLL 10
T+SCG++
Sbjct: 12 TISCGII 18


>sp|CBID_METMJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 2 DATLSCGL 9
D TL CG+
Sbjct: 71 DVTLPCGI 78


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 1 GDATLSCG 8
GD T+ CG
Sbjct: 293 GDRTMICG 300




28|SequenceR|145|136|FHLPLGDATL

>sp|Y224_METKA|UPF0284 protein MK0224|Methanopyrus kandleri (strain AV19 /

Query: 1 FHLPLGDATL 10
FH P GD L
Sbjct: 70 FHTPAGDVEL 79


>sp|RL1_METBF|LARGE ribosomal subunit protein uL1|Methanosarcina barkeri (strain Fusaro

Query: 1 FHLPLGDATL 10
FH+P+G T+
Sbjct: 161 FHVPVGRRTM 170


>sp|RFCS_METLZ|REPLICATION factor C small subunit|Methanocorpusculum labreanum (strain ATCC

Query: 4 PLGDATL 10
PLGDAT
Sbjct: 98 PLGDATF 104


>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HLPLGDA 8
+LPLGDA
Sbjct: 413 NLPLGDA 419


>sp|CAS1B_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FHLPLGDAT 9
F P+GDAT
Sbjct: 75 FMKPVGDAT 83


>sp|CS1F2_THETK|CRISPR-ASSOCIATED endonuclease Cas1/endonuclease Cas2 fusion|Thermoproteus tenax

Query: 1 FHLPLGDAT 9
F P+GDAT
Sbjct: 41 FMRPVGDAT 49


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 2 HLPLGDATL 10
H+P GD ++
Sbjct: 363 HIPQGDGSM 371


>sp|RL1_THEAC|LARGE ribosomal subunit protein uL1|Thermoplasma acidophilum (strain ATCC

Query: 1 FHLPLGDATL 10
FH+P+G ++
Sbjct: 160 FHVPVGTRSM 169


>sp|RL1_PICTO|LARGE ribosomal subunit protein uL1|Picrophilus torridus (strain ATCC

Query: 1 FHLPLG 6
FH+P+G
Sbjct: 155 FHVPIG 160


>sp|Y022_ARCFU|UNCHARACTERIZED protein AF_0022|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FHLPLGDAT 9
FHL LG+ +
Sbjct: 23 FHLDLGEGS 31


>sp|Y2002_METTM|UNCHARACTERIZED protein MTBMA_p00020|Methanothermobacter marburgensis (strain ATCC

Query: 2 HLPLGDATL 10
HL LGD L
Sbjct: 116 HLSLGDKAL 124




29|SequenceR|150|141|VTQIFFHLPL

>sp|TBP_METKA|TATA-BOX-BINDING protein|Methanopyrus kandleri (strain AV19 /

Query: 1 VTQIFFHLPL 10
V I FH+PL
Sbjct: 98 VASIDFHVPL 107




30|SequenceR|155|146|TDKPRVTQIF

>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 TDKPRVTQ 8
TD+PR T+
Sbjct: 273 TDQPRCTE 280




31|SequenceR|160|151|RYCMVTDKPR

>sp|CDC61_HALSA|ORC1-TYPE DNA replication protein 1|Halobacterium salinarum (strain ATCC

Query: 2 YCMVTDKPR 10
YC TD P+
Sbjct: 293 YCTRTDDPK 301


>sp|CYAS_METTP|CYSTEATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 CMVTDKP 9
C +TD+P
Sbjct: 140 CSITDQP 146




32|SequenceR|165|156|EEWRVRYCMV

>sp|RS8_METLZ|SMALL ribosomal subunit protein uS8|Methanocorpusculum labreanum

Query: 1 EEWRVRY 7
E W +RY
Sbjct: 87 ESWEIRY 93


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 WRVRYCM 9
WRV+Y +
Sbjct: 398 WRVKYAI 404


>sp|RNP4_METTH|RIBONUCLEASE P protein component 4|Methanothermobacter thermautotrophicus

Query: 2 EWRVRYC 8
EWR R+C
Sbjct: 57 EWRRRFC 63


>sp|Y1405_METJA|ACYLPHOSPHATASE-LIKE protein MJ1405|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WRVRYC 8
WRVR C
Sbjct: 69 WRVRKC 74


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 EEWRVRY 7
E+W VRY
Sbjct: 923 EKWLVRY 929


>sp|Y249_ARCFU|UNCHARACTERIZED protein AF_0249|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEWRVRYCM 9
EE RVR+C+
Sbjct: 74 EEERVRWCL 82


>sp|PYRI_METKA|ASPARTATE carbamoyltransferase regulatory chain|Methanopyrus kandleri (strain

Query: 2 EWRVRYC 8
E+R RYC
Sbjct: 134 EYRCRYC 140


>sp|RNP3_PYRHO|RIBONUCLEASE P protein component 3|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EEWRVRY 7
E+W VRY
Sbjct: 171 EKWDVRY 177




33|SequenceR|170|161|RGPAAEEWRV

>sp|TRPE_SACS2|ANTHRANILATE synthase component 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PAAEEW 8
PAAE+W
Sbjct: 102 PAAEDW 107


>sp|Y123_ARCFU|UNCHARACTERIZED protein AF_0123|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PAAEEWRV 10
PA+E W+V
Sbjct: 54 PASEFWKV 61


>sp|MTRA1_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanobrevibacter ruminantium

Query: 1 RGPAAEEWRV 10
+ PAA+ W V
Sbjct: 4 KKPAADNWPV 13


>sp|COFE_NATPD|COENZYME F420:L-glutamate ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PAAEEWR 9
PAA +WR
Sbjct: 169 PAARDWR 175


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 AEEWRV 10
AE+WR+
Sbjct: 24 AEQWRI 29


>sp|COFE_HALSA|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PAAEEWR 9
PAA +WR
Sbjct: 171 PAARDWR 177


>sp|COFE_HALS3|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PAAEEWR 9
PAA +WR
Sbjct: 171 PAARDWR 177




34|SequenceR|175|166|AHEVARGPAA

>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 HEVARGPAA 10
HE+A GPAA
Sbjct: 805 HELAPGPAA 813


>sp|GLNA_HALSA|GLUTAMINE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 2 HEVARG 7
HEVARG
Sbjct: 197 HEVARG 202


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AHEVARG 7
AH VARG
Sbjct: 272 AHAVARG 278


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 1 AHEVARG 7
A+EVARG
Sbjct: 190 AYEVARG 196


>sp|3MGH_METAR|PUTATIVE 3-methyladenine DNA glycosylase|Methanocella arvoryzae (strain DSM

Query: 2 HEVARGP 8
HE+A GP
Sbjct: 122 HEIASGP 128


>sp|SYR_HALLT|ARGININE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 EVARGPAA 10
EVAR PAA
Sbjct: 524 EVARFPAA 531




35|SequenceR|180|171|DGLFMAHEVA

>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DGLFMAHEVA 10
DG+ MA++VA
Sbjct: 148 DGVLMAYKVA 157


>sp|NUCS_METTH|ENDONUCLEASE NucS|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DGLFMAHE 8
DG FM H+
Sbjct: 61 DGTFMVHQ 68


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 1 DGLFMAHEVA 10
DG+ MA++VA
Sbjct: 148 DGVLMAYKVA 157


>sp|NEP1_THEON|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus onnurineus (strain

Query: 1 DGLFMAHE 8
DG+F+ HE
Sbjct: 146 DGVFVMHE 153


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DGLFMAHE 8
DGL M HE
Sbjct: 78 DGLAMGHE 85


>sp|NTPTH_HYPBU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Hyperthermus butylicus (strain DSM 5456

Query: 2 GLFMAHE 8
GLF+ HE
Sbjct: 130 GLFVVHE 136


>sp|ILVD_METVS|DIHYDROXY-ACID dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 81 DGIAMGHE 88


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|THI4_META3|THIAMINE thiazole synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DGLFMAHEV 9
DGLF+A V
Sbjct: 103 DGLFVADSV 111


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGLFMAHE 8
DG+ M HE
Sbjct: 78 DGIAMGHE 85




36|SequenceR|185|176|WHAAADGLFM

>sp|RFRNP_METMA|RNA-FREE ribonuclease P|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WHAAADGLFM 10
W AA + LFM
Sbjct: 121 WEAATECLFM 130


>sp|RFRNP_METAC|RNA-FREE ribonuclease P|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WHAAADGLFM 10
W AA + LFM
Sbjct: 121 WEAATECLFM 130


>sp|Y141_THEKO|UPF0173 metal-dependent hydrolase TK0141|Thermococcus kodakarensis (strain

Query: 1 WHAAADGL 8
WH+++DG+
Sbjct: 108 WHSSSDGV 115


>sp|Y1314_THEON|UPF0173 metal-dependent hydrolase TON_1314|Thermococcus onnurineus (strain

Query: 1 WHAAADGLF 9
WH+++DG +
Sbjct: 108 WHSSSDGKY 116


>sp|RFRNP_METBF|RNA-FREE ribonuclease P|Methanosarcina barkeri (strain Fusaro /

Query: 1 WHAAADGLFM 10
W AA + LFM
Sbjct: 121 WEAATECLFM 130


>sp|Y1671_PYRHO|UPF0173 metal-dependent hydrolase PH1671|Pyrococcus horikoshii (strain ATCC

Query: 1 WHAAADGLF 9
WH+++DG +
Sbjct: 109 WHSSSDGKY 117


>sp|Y891_STAMF|UPF0173 metal-dependent hydrolase Smar_0891|Staphylothermus marinus (strain

Query: 1 WHAAADGLFM 10
+HA GLFM
Sbjct: 136 YHAGDTGLFM 145


>sp|Y500_PYRAB|UPF0173 metal-dependent hydrolase PYRAB05000|Pyrococcus abyssi (strain GE5

Query: 1 WHAAADGLF 9
WH+++DG +
Sbjct: 109 WHSSSDGKY 117


>sp|Y1764_PYRFU|UPF0173 metal-dependent hydrolase PF1764|Pyrococcus furiosus (strain ATCC

Query: 1 WHAAADGLF 9
WH+++DG +
Sbjct: 109 WHSSSDGKY 117


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WHAAADGLF 9
WH DGL
Sbjct: 23 WHGDLDGLL 31


>sp|HEM1_METBF|GLUTAMYL-TRNA reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WHAAADGLF 9
WH DGL
Sbjct: 23 WHGDLDGLL 31


>sp|HEM1_METAC|GLUTAMYL-TRNA reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WHAAADGLF 9
WH DGL
Sbjct: 23 WHGDLDGLL 31


>sp|OTC_STAMF|ORNITHINE carbamoyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 HAAADGLFM 10
HA +D +FM
Sbjct: 263 HAKSDAVFM 271


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 WHAAADGLFM 10
+ AAADGL +
Sbjct: 812 YEAAADGLHL 821


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 1 WHAAADGLF 9
WH +G+F
Sbjct: 60 WHEPQEGVF 68


>sp|DADD_METAC|5'-DEOXYADENOSINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WHAAADG 7
W AADG
Sbjct: 169 WQGAADG 175


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 1 WHAAADGLF 9
W+ DG+F
Sbjct: 326 WNLTPDGIF 334


>sp|GLMM_PYRHO|PROBABLE phosphoglucosamine mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WHAAADGLF 9
W+ DG+F
Sbjct: 326 WNLTPDGIF 334


>sp|GLMM_PYRFU|PROBABLE phosphoglucosamine mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WHAAADGLF 9
W+ DG+F
Sbjct: 326 WNLTPDGIF 334


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 WHAAADGLF 9
W+ DG+F
Sbjct: 326 WNLTPDGIF 334


>sp|GLMM_THEKO|PROBABLE phosphoglucosamine mutase|Thermococcus kodakarensis (strain ATCC

Query: 1 WHAAADGLF 9
W+ DG+F
Sbjct: 326 WNLTPDGIF 334


>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 1 WHAAADGLF 9
W+ DG+F
Sbjct: 326 WNLTPDGIF 334




37|SequenceR|190|181|EAGGYWHAAA

>sp|SYN_THEAC|ASPARAGINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 YWHAAA 10
YWHA A
Sbjct: 219 YWHAEA 224


>sp|SYN_THEVO|ASPARAGINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 YWHAAA 10
YWHA A
Sbjct: 219 YWHAEA 224


>sp|GPMPP_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE/MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EAGGYWH 7
+ G YWH
Sbjct: 176 KGGRYWH 182


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EAGGYW 6
+ GGYW
Sbjct: 166 DLGGYW 171


>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 GGYW 6
GGYW
Sbjct: 418 GGYW 421


>sp|AROD_METJA|3-DEHYDROQUINATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGYW 6
GGYW
Sbjct: 61 GGYW 64


>sp|Y3856_METAC|UPF0285 protein MA_3856|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GYWHAA 9
G WHAA
Sbjct: 295 GKWHAA 300


>sp|RL2_METS3|LARGE ribosomal subunit protein uL2|Methanobrevibacter smithii (strain

Query: 1 EAGGYWHA 8
+AG WHA
Sbjct: 175 KAGNRWHA 182


>sp|FEN_METPE|FLAP endonuclease 1|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EAGGYWHAA 9
EAG W AA
Sbjct: 101 EAGVQWEAA 109




38|SequenceR|195|186|HQTRMEAGGY

>sp|MCRG_METFE|METHYL-COENZYME M reductase subunit gamma|Methanothermus fervidus

Query: 1 HQTRMEAG 8
HQ R EAG
Sbjct: 238 HQLRSEAG 245




39|SequenceR|200|191|LRIPWHQTRM

>sp|Y1336_HALSA|PUTATIVE esterase VNG_1336C|Halobacterium salinarum (strain ATCC 700922

Query: 1 LRIPWHQ 7
LRIP+H+
Sbjct: 40 LRIPYHE 46


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 1 LRIPWHQTR 9
L IPW+ R
Sbjct: 310 LEIPWYGPR 318


>sp|PNCB_METMA|NICOTINATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PWHQT 8
PWH T
Sbjct: 111 PWHST 115


>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 4 PWHQT 8
PWH T
Sbjct: 111 PWHST 115


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IPWHQTR 9
I W+QTR
Sbjct: 219 IAWNQTR 225


>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain NA1)

Query: 4 PWHQTRM 10
PWH TR+
Sbjct: 240 PWHPTRV 246


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LRIPWHQ 7
L+IPW +
Sbjct: 232 LKIPWEE 238


>sp|ENGB_METJA|PROBABLE GTP-binding protein EngB|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PWHQ 7
PWHQ
Sbjct: 180 PWHQ 183


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 IPWHQT 8
+PWH T
Sbjct: 428 LPWHPT 433




40|SequenceR|205|196|EQQGDLRIPW

>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 3 QGDLRIPW 10
+ DLR+PW
Sbjct: 236 EADLRLPW 243


>sp|RRP4_SULTO|EXOSOME complex component Rrp4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 QGDLRIPW 10
+GD +IPW
Sbjct: 22 EGDFQIPW 29


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GDLRIPW 10
GDLR PW
Sbjct: 47 GDLRPPW 53


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GDLRIPW 10
GDLR PW
Sbjct: 47 GDLRPPW 53


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 GDLRIPW 10
GDLR PW
Sbjct: 47 GDLRPPW 53


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GDLRIPW 10
GDLR PW
Sbjct: 47 GDLRPPW 53


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 5 DLRIPW 10
DL+IPW
Sbjct: 231 DLKIPW 236


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EQQGDLRIPW 10
E +GDL +PW
Sbjct: 1024 EVKGDLILPW 1033


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 GDLRIPW 10
GDL+ PW
Sbjct: 47 GDLKPPW 53


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EQQGDLRIPW 10
EQ G++ I W
Sbjct: 525 EQNGNISIDW 534


>sp|DAPA_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 GDLRIP 9
GDLR+P
Sbjct: 261 GDLRLP 266


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 5 DLRIPW 10
DL++PW
Sbjct: 444 DLKMPW 449


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 QQGDLRIPW 10
Q G R+PW
Sbjct: 421 QSGVARVPW 429


>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 1 EQQGDLRIP 9
E+QG LR P
Sbjct: 159 EEQGVLRYP 167


>sp|RS13_HYPBU|SMALL ribosomal subunit protein uS13|Hyperthermus butylicus (strain DSM

Query: 4 GDLRIPW 10
GDL++P+
Sbjct: 20 GDLKVPY 26


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 1 EQQGDLR 7
E QGDLR
Sbjct: 191 ESQGDLR 197


>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 QGDLRIPW 10
+GD RI W
Sbjct: 149 RGDSRISW 156




41|SequenceR|210|201|VFPQPEQQGD

>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 3 PQPEQQG 9
PQP+Q+G
Sbjct: 126 PQPDQRG 132


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VFPQPEQQ 8
VFP PE +
Sbjct: 86 VFPNPEDE 93


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 VFPQPEQQ 8
VFP PE +
Sbjct: 96 VFPNPEDE 103


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FPQPEQQ 8
FP+P+Q+
Sbjct: 597 FPEPQQK 603


>sp|RL19E_HALMA|LARGE ribosomal subunit protein eL19|Haloarcula marismortui (strain

Query: 1 VFPQPEQQGD 10
V+ PE+QGD
Sbjct: 22 VWFNPERQGD 31


>sp|RS4E_AERPE|SMALL ribosomal subunit protein eS4|Aeropyrum pernix (strain ATCC 700893

Query: 3 PQPEQQGD 10
P PE++GD
Sbjct: 114 PIPEEEGD 121


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VFPQPEQQ 8
VFP PE +
Sbjct: 92 VFPNPEDE 99


>sp|DAPA_HALMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FPQPEQQG 9
+ +PEQQG
Sbjct: 110 YNKPEQQG 117




42|SequenceR|215|206|YVDSTVFPQP

>sp|NCPP_AERPE|PROBABLE inosine/xanthosine triphosphatase|Aeropyrum pernix (strain ATCC

Query: 2 VDSTVFPQP 10
VDS V PQP
Sbjct: 35 VDSGVGPQP 43


>sp|AGL15_HALVD|PROBABLE low-salt glycan biosynthesis flippase|Haloferax volcanii (strain

Query: 2 VDSTVFPQ 9
V ST+FPQ
Sbjct: 255 VASTIFPQ 262


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VDSTVFP 8
VD+TVFP
Sbjct: 271 VDATVFP 277


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VDSTVFP 8
VD+TVFP
Sbjct: 785 VDATVFP 791


>sp|ENGB_METBF|PROBABLE GTP-binding protein EngB|Methanosarcina barkeri (strain Fusaro /

Query: 2 VDSTVFPQ 9
+DS FPQ
Sbjct: 102 IDSPAFPQ 109


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 VDSTVFP 8
+DS VFP
Sbjct: 248 IDSAVFP 254


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 VDSTVFP 8
+DS VFP
Sbjct: 248 IDSAVFP 254


>sp|MCRW_METTH|METHYL-COENZYME M reductase II operon|Methanothermobacter thermautotrophicus

Query: 1 YVDSTVFPQ 9
++D +FPQ
Sbjct: 7 FIDVKIFPQ 15


>sp|Y1051_ARCFU|UNCHARACTERIZED protein AF_1051|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YVDSTVFP 8
YV+STVF
Sbjct: 106 YVNSTVFS 113


>sp|NARB_HALMT|PUTATIVE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 5 TVFPQP 10
TVFP+P
Sbjct: 107 TVFPEP 112


>sp|RUBPP_HALXS|RIBULOSE-1,5-BISPHOSPHATE 5-phosphatase|Halopiger xanaduensis (strain DSM 18323

Query: 2 VDSTVFPQP 10
+D+T++P P
Sbjct: 9 LDNTLYPYP 17




43|SequenceR|220|211|AADSSYVDST

***** No hits found ******


44|SequenceR|225|216|LIGGFAADSS

>sp|RS28_METAC|SMALL ribosomal subunit protein eS28|Methanosarcina acetivorans (strain

Query: 2 IGGFAAD 8
IGGFAA+
Sbjct: 10 IGGFAAE 16


>sp|COXX_CALMQ|PROTOHEME IX farnesyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 LIGGFAADSS 10
+IGGFA +++
Sbjct: 136 VIGGFAGNAA 145


>sp|AROD_METKA|3-DEHYDROQUINATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 LIGGFA 6
LIGGFA
Sbjct: 183 LIGGFA 188


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIGGFAAD 8
+IGG AAD
Sbjct: 158 IIGGTAAD 165


>sp|Y1590_METJA|UNCHARACTERIZED protein MJ1590|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIGGFAA 7
LIGGF A
Sbjct: 10 LIGGFTA 16




45|SequenceR|230|221|LWYRELIGGF

>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WYRELIG 8
WY++LIG
Sbjct: 254 WYKQLIG 260


>sp|OGG1_SULTO|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfurisphaera tokodaii (strain DSM

Query: 1 LWYRELI 7
+W+RELI
Sbjct: 32 VWFRELI 38


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 WYRELIGGF 10
WY + IGG
Sbjct: 303 WYSDRIGGL 311


>sp|CSM2_METJA|CRISPR system Cms protein Csm2|Methanocaldococcus jannaschii (strain

Query: 2 WYRELI 7
WY+EL+
Sbjct: 64 WYKELV 69


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 LWYRELIGGF 10
LW + L GGF
Sbjct: 226 LWEKMLNGGF 235


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LWYRELIGGF 10
LW + L GGF
Sbjct: 228 LWEKMLNGGF 237


>sp|Y294_THEVO|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma volcanium

Query: 3 YRELIGG 9
YRE IGG
Sbjct: 279 YRESIGG 285


>sp|OGG1_SULAC|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LWYRELI 7
+W+REL+
Sbjct: 32 VWFRELV 38


>sp|CMR1B_PYRFU|CRISPR system Cmr subunit Cmr1-2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WYRELIGGF 10
W+R L GG+
Sbjct: 38 WFRALAGGY 46


>sp|ANTRB_HALVD|PUTATIVE ABC transporter anion-binding protein|Haloferax volcanii (strain

Query: 2 WYRELIGG 9
WYRE+ G
Sbjct: 192 WYREIGKG 199


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 WYRELIGG 9
W+ E IGG
Sbjct: 448 WWHEEIGG 455


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LWYRELIGG 9
+W+R IGG
Sbjct: 409 VWFRNNIGG 417


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 LWYRELIGGF 10
+W R+L+ G+
Sbjct: 308 IWLRDLLPGY 317


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WYRELI 7
WY ELI
Sbjct: 15 WYNELI 20


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 2 WYRELIG 8
W R+LIG
Sbjct: 439 WKRDLIG 445


>sp|TRUB_HALSA|PROBABLE tRNA pseudouridine synthase B|Halobacterium salinarum (strain

Query: 2 WYRELIG 8
W R+L+G
Sbjct: 37 WIRDLVG 43


>sp|TRUB_HALS3|PROBABLE tRNA pseudouridine synthase B|Halobacterium salinarum (strain

Query: 2 WYRELIG 8
W R+L+G
Sbjct: 37 WIRDLVG 43


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 LWYRELIGGF 10
L Y++L GG+
Sbjct: 271 LRYKDLAGGY 280


>sp|MNTP_METST|MANGANESE exporter MntP|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LWYRELIGGF 10
LWY GGF
Sbjct: 35 LWYGIFFGGF 44


>sp|Y1413_SULTO|PROTEIN STK_14130|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LWYRELI 7
+WY E+I
Sbjct: 3 IWYAEII 9


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 WYRELIGG 9
W R ++GG
Sbjct: 455 WLRHVLGG 462


>sp|OGG1_METS5|8-OXOGUANINE DNA glycosylase/AP lyase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LWYRELI 7
+W+REL+
Sbjct: 32 VWFRELV 38




46|SequenceR|235|226|AARSSLWYRE

>sp|Y1039_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 1 AARSSLWYRE 10
AA+ WYR+
Sbjct: 157 AAKPGFWYRK 166


>sp|CUTB_SULAC|GLYCERALDEHYDE dehydrogenase medium chain|Sulfolobus acidocaldarius (strain ATCC

Query: 3 RSSLWYR 9
R S WYR
Sbjct: 259 RGSSWYR 265


>sp|Y51B_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514.2|Methanocaldococcus

Query: 4 SSLWY 8
SSLWY
Sbjct: 6 SSLWY 10


>sp|THI4_METTP|THIAMINE thiazole synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 6 LWYRE 10
+WYRE
Sbjct: 89 IWYRE 93


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 RSSLWY 8
RSS WY
Sbjct: 7 RSSAWY 12


>sp|OGG1_SULTO|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfurisphaera tokodaii (strain DSM

Query: 2 ARSSLWYRE 10
A ++W+RE
Sbjct: 28 AEENVWFRE 36




47|SequenceR|240|231|NVKIAAARSS

***** No hits found ******


48|SequenceR|245|236|FPVSDNVKIA

>sp|PGK2_METJA|2-PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PVSDNVKIA 10
PV +N+KI+
Sbjct: 268 PVVENIKIS 276


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PVSDNVKIA 10
PV DNV ++
Sbjct: 496 PVEDNVNVS 504


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 2 PVSDNVKI 9
PVSDN+ +
Sbjct: 459 PVSDNINL 466


>sp|THIL_PYRAB|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 FPVSDNVK 8
P+SD+VK
Sbjct: 229 LPISDSVK 236


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 2 PVSDNVKI 9
PVSDN+ +
Sbjct: 459 PVSDNINL 466


>sp|Y1467_METJA|UNCHARACTERIZED protein MJ1467|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FPVSDNVKI 9
F + DNVK+
Sbjct: 21 FSIKDNVKL 29


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 FPVSDNVKIA 10
FP NV+IA
Sbjct: 539 FPAYTNVRIA 548


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PVSDNVKI 9
PV D+VK+
Sbjct: 494 PVKDSVKV 501




49|SequenceR|250|241|NWGLHFPVSD

>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 NWGLHFPVSD 10
+WG+ FP SD
Sbjct: 235 DWGVKFPGSD 244


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 1 NWGLHFPVS 9
NWG+ PV+
Sbjct: 549 NWGIEMPVA 557


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NWGLHFPVS 9
NWG+ PV+
Sbjct: 551 NWGIEMPVA 559


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 NWGLHFPVS 9
NWG+ PV+
Sbjct: 537 NWGVEMPVA 545


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NWGLHFPVSD 10
+WG+ FP D
Sbjct: 235 DWGVKFPGRD 244


>sp|Y008_METJA|UNCHARACTERIZED protein MJ0008|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NWGLHF 6
+WGLH+
Sbjct: 25 DWGLHY 30


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NWGLHFPVSD 10
+WG+ FP S+
Sbjct: 237 SWGVKFPGSE 246


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 NWGLHFPVSD 10
+WG+ FP D
Sbjct: 235 DWGVKFPGRD 244


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WGLHF 6
WG+HF
Sbjct: 765 WGIHF 769


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GLHFPVSD 10
G+ FP+SD
Sbjct: 44 GIAFPISD 51


>sp|RNZ_NITMS|RIBONUCLEASE Z|Nitrosopumilus maritimus (strain SCM1)

Query: 1 NWGLHFPV 8
N+GL FP+
Sbjct: 105 NFGLSFPI 112


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NWGLHFP 7
+WG+ FP
Sbjct: 239 DWGIKFP 245


>sp|MTRD_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 1 NWGLHF 6
+WG+HF
Sbjct: 23 SWGVHF 28


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 WGLHFPVSD 10
WG+ FP D
Sbjct: 236 WGVKFPGRD 244


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 WGLHFPVSD 10
WG+ FP D
Sbjct: 240 WGVKFPGHD 248


>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 2 WGLHF 6
WG+HF
Sbjct: 189 WGVHF 193


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 NWGLHFPVS 9
+WG+ PV+
Sbjct: 535 SWGIEMPVA 543


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 WGLHFP 7
WG+ FP
Sbjct: 731 WGISFP 736


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WGLHFP 7
WG+ FP
Sbjct: 231 WGVRFP 236


>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NWGLHFPVSD 10
NWG+ +SD
Sbjct: 122 NWGIKAKLSD 131


>sp|IDI2_THEVO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NWGLHFPVS 9
NWG+ P S
Sbjct: 246 NWGIPSPAS 254


>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NWGLHFPVS 9
NWG+ P S
Sbjct: 246 NWGIPSPAS 254


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 2 WGLHFPVS 9
WG+ PV+
Sbjct: 546 WGIEMPVA 553


>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 1 NWGLHFPVS 9
NWG+ P S
Sbjct: 246 NWGIPSPAS 254


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 WGLHFPVSD 10
WG+ FP D
Sbjct: 236 WGVKFPGHD 244


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WGLHFP 7
WG+ FP
Sbjct: 244 WGVKFP 249


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WGLHFP 7
WG+ FP
Sbjct: 244 WGVRFP 249


>sp|FDHC_METTF|PROBABLE formate transporter|Methanothermobacter thermautotrophicus

Query: 2 WGLHFPV 8
WG+ FP+
Sbjct: 205 WGIWFPI 211


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 WGLHFPVS 9
WG+ PVS
Sbjct: 244 WGIPTPVS 251


>sp|Y788_ARCFU|UNCHARACTERIZED transporter AF_0788|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WGLHFPV 8
WG FPV
Sbjct: 54 WGSTFPV 60


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 3 GLHFPVSD 10
G HF +SD
Sbjct: 149 GYHFHISD 156




50|SequenceR|255|246|SRETSNWGLH

>sp|GFCR_METAR|TRANSCRIPTIONAL regulator GfcR|Methanocella arvoryzae (strain DSM 22066

Query: 1 SRETSNWGL 9
SRET+ W L
Sbjct: 31 SRETATWLL 39


>sp|Y827_METJA|UNCHARACTERIZED protein MJ0827|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RETSNWGL 9
RET WG+
Sbjct: 149 RETDAWGV 156


>sp|GFCR_HALSA|TRANSCRIPTIONAL regulator GfcR|Halobacterium salinarum (strain ATCC 700922

Query: 1 SRETSNW 7
SRET++W
Sbjct: 31 SRETASW 37


>sp|GFCR_HALS3|TRANSCRIPTIONAL regulator GfcR|Halobacterium salinarum (strain ATCC 29341

Query: 1 SRETSNW 7
SRET++W
Sbjct: 31 SRETASW 37


>sp|RL13_PYRNV|LARGE ribosomal subunit protein uL13|Pyrobaculum neutrophilum (strain

Query: 2 RETSNWGLH 10
R+ S WG H
Sbjct: 68 RKISEWGTH 76


>sp|GFCR_HALLT|TRANSCRIPTIONAL regulator GfcR|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 SRETSNW 7
SRET++W
Sbjct: 31 SRETASW 37


>sp|GFCR_HALWD|TRANSCRIPTIONAL regulator GfcR|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SRETSNW 7
SRET++W
Sbjct: 31 SRETASW 37


>sp|GFCR_HALVD|TRANSCRIPTIONAL regulator GfcR|Haloferax volcanii (strain ATCC 29605

Query: 1 SRETSNW 7
SRET++W
Sbjct: 31 SRETASW 37


>sp|Y008_METJA|UNCHARACTERIZED protein MJ0008|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 NWGLH 10
+WGLH
Sbjct: 25 DWGLH 29


>sp|LADH_META3|LACTALDEHYDE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 SNWGLH 10
SN+GLH
Sbjct: 391 SNYGLH 396


>sp|Y096_ARCFU|UNCHARACTERIZED protein AF_0096|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 SNWGLH 10
+ WGLH
Sbjct: 9 ATWGLH 14


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 SRETSNW 7
+RET NW
Sbjct: 128 ARETVNW 134


>sp|AROC_HALMD|CHORISMATE synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 SRETSNW 7
+RET NW
Sbjct: 128 ARETVNW 134


>sp|Y1515_METJA|UNCHARACTERIZED protein MJ1515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SRETSNW 7
SR+T NW
Sbjct: 315 SRDTVNW 321


>sp|AROC_HALMA|CHORISMATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SRETSNW 7
+RET NW
Sbjct: 128 ARETVNW 134


>sp|GFCR_HALMA|TRANSCRIPTIONAL regulator GfcR|Haloarcula marismortui (strain ATCC 43049

Query: 1 SRETSNW 7
SRET++W
Sbjct: 31 SRETASW 37


>sp|AROC_HALSA|CHORISMATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SRETSNW 7
+RET NW
Sbjct: 128 ARETVNW 134


>sp|AROC_HALWD|CHORISMATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SRETSNW 7
+RET NW
Sbjct: 128 ARETVNW 134


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RETSNWGLH 10
++ WG+H
Sbjct: 760 KDDDKWGIH 768




51|SequenceR|260|251|AQLRLSRETS

***** No hits found ******


52|SequenceR|265|256|TDHYRAQLRL

>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 2 DHYRAQLR 9
+H+RA++R
Sbjct: 574 EHFRAEMR 581




53|SequenceR|270|261|PPKYPTDHYR

>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PKYPTDHY 9
P YP DHY
Sbjct: 387 PGYPADHY 394


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPKYPTDHY 9
PP Y TD Y
Sbjct: 905 PPPYTTDEY 913


>sp|Y160_METLZ|PUTATIVE HTH-type transcriptional regulatory protein|Methanocorpusculum

Query: 2 PKYPTDHYR 10
PK P DH R
Sbjct: 215 PKRPEDHLR 223


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PKYPTDHYR 10
P++PTDH R
Sbjct: 440 PRHPTDHAR 448


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PPKYPTDHY 9
PP YPT ++
Sbjct: 45 PPPYPTGNF 53


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 PPKYPTDHYR 10
P +YP + YR
Sbjct: 947 PARYPLEFYR 956


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PPKYPTDHY 9
PP YPT ++
Sbjct: 45 PPPYPTGNF 53


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PPKYPTDHY 9
PP YPT ++
Sbjct: 45 PPPYPTGNF 53


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PKYPTDHYR 10
P +PTDH R
Sbjct: 440 PLHPTDHSR 448


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 PPKYPTDHYR 10
P +YP + YR
Sbjct: 946 PARYPLEFYR 955


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 3 KYPTDHYR 10
KY TD YR
Sbjct: 177 KYATDKYR 184


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PPKYPTDHY 9
PP YPT ++
Sbjct: 42 PPPYPTGNF 50


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PPKYPT 6
PP YPT
Sbjct: 41 PPPYPT 46


>sp|Y1296_METAC|PUTATIVE RNase MA_1296|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KYPTDHYR 10
KYP H+R
Sbjct: 62 KYPQVHWR 69


>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KYPTDHY 9
K P DHY
Sbjct: 144 KIPIDHY 150


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPKYPTDHY 9
PP YPT +
Sbjct: 41 PPPYPTGSF 49


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPKYPTD 7
PP Y TD
Sbjct: 929 PPPYTTD 935


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PPKYPTDH 8
P KYP H
Sbjct: 339 PDKYPNTH 346


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 PPKYPTD 7
PP YP D
Sbjct: 136 PPVYPED 142


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPKYPT 6
PP YPT
Sbjct: 41 PPPYPT 46


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PKYPTDHYR 10
P +PTDH R
Sbjct: 440 PLHPTDHKR 448


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PPKYPT 6
PP YPT
Sbjct: 44 PPPYPT 49


>sp|COFC_METPS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella paludicola (strain DSM 17711

Query: 1 PPKYPTDHY 9
P KY D+Y
Sbjct: 126 PQKYHVDYY 134


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 1 PPKYPTD 7
PP+ PTD
Sbjct: 206 PPEKPTD 212


>sp|COFC_METAR|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PPKYPTDHY 9
P KY D+Y
Sbjct: 127 PDKYHVDYY 135


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PPKYPT 6
PP YPT
Sbjct: 43 PPPYPT 48


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PPKYPTD 7
PP Y TD
Sbjct: 267 PPSYSTD 273


>sp|DPHB_THEON|DIPHTHINE synthase|Thermococcus onnurineus (strain NA1)

Query: 4 YPTDHY 9
+PT HY
Sbjct: 144 FPTSHY 149


>sp|RL5_METMA|LARGE ribosomal subunit protein uL5|Methanosarcina mazei (strain ATCC

Query: 3 KYPTDH 8
K PTDH
Sbjct: 144 KIPTDH 149


>sp|IF2B_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPKYPTDHYR 10
PPK T YR
Sbjct: 28 PPKSGTSEYR 37


>sp|Y1060_METJA|UNCHARACTERIZED protein MJ1060|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKYPTDHYR 10
PKY D+Y+
Sbjct: 225 PKYIKDYYK 233


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PPKYPT 6
PP YPT
Sbjct: 45 PPPYPT 50


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 1 PPKYPTDHYR 10
PP+ PT+ R
Sbjct: 188 PPRVPTEKDR 197


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPKYPT 6
PP YPT
Sbjct: 357 PPIYPT 362


>sp|DPHB_THEKO|DIPHTHINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 YPTDHY 9
+PT HY
Sbjct: 144 FPTSHY 149


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 2 PKYPTD 7
PKYP D
Sbjct: 433 PKYPGD 438


>sp|SYD_PYRAE|ASPARTATE--TRNA(ASP) ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 YPTDHYR 10
YP D YR
Sbjct: 419 YPRDRYR 425


>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 2 PKYPTDHY 9
P P DHY
Sbjct: 207 PVLPEDHY 214




54|SequenceR|275|266|AARGAPPKYP

>sp|UPP_PYRFU|URACIL phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AARGAPPKY 9
AARG PPK+
Sbjct: 110 AARGKPPKF 118


>sp|RL10_ARCFU|LARGE ribosomal subunit protein uL10|Archaeoglobus fulgidus (strain

Query: 1 AARGAPPKY 9
A RG+PP+Y
Sbjct: 3 AVRGSPPEY 11


>sp|TRPA_SULAC|TRYPTOPHAN synthase alpha chain|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GAPPKY 9
G PPKY
Sbjct: 38 GIPPKY 43


>sp|TRPA_SACS2|TRYPTOPHAN synthase alpha chain|Saccharolobus solfataricus (strain ATCC

Query: 4 GAPPKY 9
G PPKY
Sbjct: 39 GIPPKY 44


>sp|TRPA_SULTO|TRYPTOPHAN synthase alpha chain|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GAPPKY 9
G PPKY
Sbjct: 37 GLPPKY 42


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GAPPKY 9
G PPKY
Sbjct: 588 GNPPKY 593


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 2 ARGAPPKYP 10
ARG+PP P
Sbjct: 46 ARGSPPSLP 54


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 PPKYP 10
PPKYP
Sbjct: 889 PPKYP 893


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 2 ARGAPPKYP 10
ARG P YP
Sbjct: 596 ARGIDPDYP 604


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 2 ARGAPPKYP 10
+RGA KYP
Sbjct: 260 SRGAVGKYP 268


>sp|THIL_NITMS|THIAMINE-MONOPHOSPHATE kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 AARGAPPKY 9
AA+G P+Y
Sbjct: 69 AAKGVKPQY 77


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AARGAPPKYP 10
A R AP YP
Sbjct: 24 AVRAAPQPYP 33




55|SequenceR|280|271|SLEPAAARGA

***** No hits found ******


56|SequenceR|285|276|VCVRYSLEPA

>sp|Y855_SACI1|PROTEIN YN1551_0855|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 CVRYSLEP 9
C++ SLEP
Sbjct: 173 CIKASLEP 180


>sp|Y2104_SACI2|PROTEIN LS215_2104|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 CVRYSLEP 9
C++ SLEP
Sbjct: 173 CIKASLEP 180


>sp|Y2063_SACI7|PROTEIN YG5714_2063|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 CVRYSLEP 9
C++ SLEP
Sbjct: 173 CIKASLEP 180


>sp|Y2019_SACI3|PROTEIN M1627_2019|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 CVRYSLEP 9
C++ SLEP
Sbjct: 173 CIKASLEP 180


>sp|Y1949_SACI6|PROTEIN M164_1949|Saccharolobus islandicus (strain M.16.4 /

Query: 2 CVRYSLEP 9
C++ SLEP
Sbjct: 173 CIKASLEP 180


>sp|Y1941_SACI4|PROTEIN M1425_1941|Saccharolobus islandicus (strain M.14.25 /

Query: 2 CVRYSLEP 9
C++ SLEP
Sbjct: 173 CIKASLEP 180


>sp|Y193_SACS2|PROTEIN SSO0193|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CVRYSLEP 9
C++ SLEP
Sbjct: 173 CIKASLEP 180


>sp|Y593_PYRFU|UPF0282 protein PF0593|Pyrococcus furiosus (strain ATCC 43587

Query: 4 RYSLEPA 10
RYSL PA
Sbjct: 39 RYSLSPA 45


>sp|Y1029_THESM|UPF0282 protein TSIB_1029|Thermococcus sibiricus (strain DSM 12597

Query: 4 RYSLEPA 10
RYSL PA
Sbjct: 39 RYSLSPA 45




57|SequenceR|290|281|TVDSGVCVRY

>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 2 VDSGVCVR 9
VDSGVC R
Sbjct: 10 VDSGVCAR 17


>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 TVDSGVCV 8
TVD+G+C+
Sbjct: 274 TVDAGLCM 281


>sp|UPPS_HALMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Haloarcula

Query: 3 DSGVCVR 9
++GVC+R
Sbjct: 111 EAGVCIR 117


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TVDSGVCV 8
TVD VCV
Sbjct: 173 TVDETVCV 180


>sp|Y551_METJA|UNCHARACTERIZED protein MJ0551|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DSGVCVRY 10
D G+C RY
Sbjct: 147 DIGICYRY 154


>sp|DPHB_AERPE|DIPHTHINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TVDSGVCVRY 10
+++GV VRY
Sbjct: 107 ALEAGVAVRY 116


>sp|PYRE_METAC|OROTATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 DSGVCVRY 10
++G CV+Y
Sbjct: 147 ETGACVKY 154


>sp|IF5A_METMP|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain DSM 14266

Query: 2 VDSGVCVRY 10
+DSGV V Y
Sbjct: 108 IDSGVEVEY 116


>sp|BACH_HALMA|HALORHODOPSIN marismortui (strain ATCC 43049

Query: 1 TVDSGVCV 8
T+D G+CV
Sbjct: 139 TMDIGMCV 146


>sp|BACH_HALHS|HALORHODOPSIN halobium (strain shark)

Query: 1 TVDSGVCV 8
T+D G+CV
Sbjct: 139 TMDIGMCV 146


>sp|BACH_HALHP|HALORHODOPSIN halobium (strain port)

Query: 1 TVDSGVCV 8
T+D G+CV
Sbjct: 139 TMDIGMCV 146


>sp|IF5A_METM5|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C5 /

Query: 2 VDSGVCVRY 10
+DSGV V Y
Sbjct: 108 IDSGVEVEY 116


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 1 TVDSGVCV 8
TVD+ +CV
Sbjct: 275 TVDASLCV 282




58|SequenceR|295|286|YKHISTVDSG

>sp|TPIS_METBR|TRIOSEPHOSPHATE isomerase|Methanobacterium bryantii

Query: 2 KHISTVDSG 10
+HI T+D+G
Sbjct: 66 QHIDTIDAG 74


>sp|GCH3_PYRAE|GTP cyclohydrolase III|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KHISTVDSG 10
+ IST+DSG
Sbjct: 140 RTISTIDSG 148


>sp|CSL4_ARCFU|EXOSOME complex component Csl4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HISTVDSG 10
H+S VD G
Sbjct: 96 HVSNVDEG 103


>sp|TPIS_METTH|TRIOSEPHOSPHATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 KHISTVDSG 10
+HI VD+G
Sbjct: 69 QHIDAVDAG 77


>sp|RRP41_NITMS|EXOSOME complex component Rrp41|Nitrosopumilus maritimus (strain SCM1)

Query: 2 KHISTVDSG 10
KH+S D+G
Sbjct: 65 KHMSDTDTG 73


>sp|CMR5_ARCFU|CRISPR system Cmr subunit Cmr5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YKHIST 6
YKH+ST
Sbjct: 91 YKHLST 96


>sp|Y1222_METJA|UNCHARACTERIZED protein MJ1222|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YKHISTVDSG 10
YK+I VD G
Sbjct: 44 YKNIVVVDDG 53


>sp|PUR5_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KHISTVDSG 10
KH++ DSG
Sbjct: 4 KHLTYADSG 12


>sp|DAPAL_THEAC|UNCHARACTERIZED DapA-like lyase Ta1157|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YKHISTVDSG 10
Y+H STV S
Sbjct: 115 YRHFSTVISA 124




59|SequenceR|300|291|YRRVMYKHIS

>sp|PCC1_PYRAB|KEOPS complex subunit Pcc1|Pyrococcus abyssi (strain GE5 /

Query: 1 YRRVMYKHIS 10
Y V+Y+H+S
Sbjct: 24 YTSVLYEHVS 33




60|SequenceR|305|296|SPKNFYRRVM

>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PKNFYRRV 9
P++FYRRV
Sbjct: 209 PEDFYRRV 216


>sp|SYH_METS5|HISTIDINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 KNFYRRV 9
+NFYRR+
Sbjct: 145 ENFYRRI 151


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain Fusaro

Query: 2 PKNFYR 7
PKN YR
Sbjct: 262 PKNLYR 267


>sp|NADK_METTH|NAD kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 KNFYRRV 9
K+FYR+V
Sbjct: 263 KDFYRKV 269


>sp|NFI_PYRAB|ENDONUCLEASE V|Pyrococcus abyssi (strain GE5 /

Query: 1 SPKNFYRRV 9
+P+N YR+V
Sbjct: 130 TPENSYRKV 138


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PKNFYRRV 9
PKNF++ +
Sbjct: 243 PKNFFKEL 250


>sp|TRUD_METAC|PROBABLE tRNA pseudouridine synthase D|Methanosarcina acetivorans (strain

Query: 2 PKNFYR 7
PKN YR
Sbjct: 265 PKNLYR 270


>sp|DMSD_HALSA|PUTATIVE dimethyl sulfoxide reductase chaperone|Halobacterium salinarum

Query: 2 PKNFYRRVM 10
PK FYR ++
Sbjct: 170 PKPFYRTLL 178


>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKNFYRR 8
P NFY R
Sbjct: 326 PANFYNR 332




61|SequenceR|310|301|PAPVRSPKNF

>sp|TF2B_AERPE|TRANSCRIPTION initiation factor IIB|Aeropyrum pernix (strain ATCC 700893

Query: 3 PVRSPKNF 10
PVR P+NF
Sbjct: 218 PVRKPENF 225


>sp|GSA2_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 2|Cenarchaeum symbiosum (strain A)

Query: 1 PAPVRS 6
PAPVRS
Sbjct: 75 PAPVRS 80


>sp|THSB_THEKO|CHAPERONIN subunit beta|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 APVRSPK 8
APVR PK
Sbjct: 496 APVRVPK 502


>sp|THSB_THEK8|CHAPERONIN subunit beta|Thermococcus sp. (strain KS-8)

Query: 2 APVRSPK 8
APVR PK
Sbjct: 496 APVRVPK 502


>sp|THSB_THEK1|CHAPERONIN subunit beta|Thermococcus sp. (strain JCM 11816

Query: 2 APVRSPK 8
APVR PK
Sbjct: 496 APVRVPK 502


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 APVRSPKNF 10
APV P NF
Sbjct: 444 APVEVPHNF 452


>sp|HIS4_SULTO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Sulfurisphaera tokodaii (strain

Query: 3 PVRSPKNF 10
P++ PK+F
Sbjct: 105 PIKDPKSF 112


>sp|IF6_METLZ|TRANSLATION initiation factor 6|Methanocorpusculum labreanum (strain ATCC

Query: 3 PVRSPKNF 10
PV +PK F
Sbjct: 27 PVEAPKEF 34


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PAPVRSP 7
P PVR+P
Sbjct: 130 PKPVRTP 136


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 1 PAPVRSP 7
P PVR+P
Sbjct: 130 PKPVRTP 136


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 PAPVRSPKN 9
PAP P+N
Sbjct: 306 PAPAPQPRN 314


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 PAPVRSPKNF 10
P P+ P+NF
Sbjct: 89 PNPLPRPQNF 98


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 1 PAPVRSPKN 9
P+P+ PKN
Sbjct: 24 PSPLPEPKN 32




62|SequenceR|315|306|DRFAEPAPVR

>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DRFAEPAPVR 10
+ F EP+P++
Sbjct: 244 ENFKEPSPIK 253


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FAEPAPVR 10
F EP P+R
Sbjct: 218 FGEPCPIR 225


>sp|Y3507_METJA|UNCHARACTERIZED protein MJECL07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RFAEPAPV 9
RFAE +P+
Sbjct: 331 RFAESSPI 338


>sp|Y919_METJA|UNCHARACTERIZED protein MJ0919|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DRFAEPAPV 9
D F+ PAPV
Sbjct: 14 DNFSTPAPV 22


>sp|MPTN_METMA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DRFAEPAPV 9
DR EPAPV
Sbjct: 170 DRKIEPAPV 178


>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DRFAEPAPV 9
+ F EP+P+
Sbjct: 244 ENFIEPSPI 252


>sp|PCNA3_AERPE|DNA polymerase sliding clamp 3|Aeropyrum pernix (strain ATCC 700893

Query: 3 FAEPAPVR 10
F+E APVR
Sbjct: 222 FSEDAPVR 229


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 DRFAEPAP 8
DR EPAP
Sbjct: 107 DRILEPAP 114


>sp|PSA_PYRFU|PROTEASOME subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FAEPAPV 9
+ EPAPV
Sbjct: 105 YGEPAPV 111


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 3 FAEPAPVR 10
+A+P PVR
Sbjct: 421 YADPEPVR 428


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 3 FAEPAPVR 10
+A+P PVR
Sbjct: 421 YADPEPVR 428


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 DRFAEPAPVR 10
+ +EP P+R
Sbjct: 231 EEMSEPGPIR 240




63|SequenceR|320|311|TSWIPDRFAE

>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SWIPDRFAE 10
SW+PD ++E
Sbjct: 234 SWLPDAYSE 242


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SWIPDRFAE 10
SWI DR+ E
Sbjct: 867 SWIVDRYTE 875


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SWIPDRFAE 10
W+PDR+ E
Sbjct: 139 QWLPDRYVE 147


>sp|EF1A_PYRIL|ELONGATION factor 1-alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SWIPDRFAE 10
+WI DRF E
Sbjct: 67 AWILDRFKE 75


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SWIPDRFAE 10
+WI DRF E
Sbjct: 67 AWILDRFKE 75


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 SWIPDRFAE 10
+WI DRF E
Sbjct: 67 AWILDRFKE 75


>sp|EF1A_PYRAE|ELONGATION factor 1-alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SWIPDRFAE 10
+WI DRF E
Sbjct: 67 AWILDRFKE 75


>sp|RTCA_METBU|RNA 3'-terminal phosphate cyclase|Methanococcoides burtonii (strain DSM

Query: 4 IPDRFAE 10
+PDRF+E
Sbjct: 174 VPDRFSE 180


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SWIPDRF 8
W+PDRF
Sbjct: 156 QWLPDRF 162


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 2 SWIPDRFAE 10
+W+ DRF E
Sbjct: 57 AWVMDRFKE 65


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SWIPDRFAE 10
+W+ DRF E
Sbjct: 57 AWVMDRFKE 65


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SWIPDRFAE 10
+W+ DRF E
Sbjct: 57 AWVMDRFKE 65


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WIPDRFAE 10
WI DRF E
Sbjct: 723 WIIDRFQE 730


>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 1 TSWIPDRFAE 10
+ W+PDR A+
Sbjct: 138 SRWMPDRVAD 147


>sp|NASB_HALMT|PROBABLE nitrate transporter|Haloferax mediterranei (strain ATCC 33500

Query: 1 TSWIPDRFA 9
T W+ DRF
Sbjct: 65 TGWLSDRFG 73


>sp|Y049_PYRAE|UNCHARACTERIZED serpin-like protein PAE0049|Pyrobaculum aerophilum (strain ATCC

Query: 2 SWIPDRF 8
+W PDRF
Sbjct: 167 NWWPDRF 173


>sp|MBD_THEVO|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma volcanium (strain ATCC

Query: 2 SWIPDRFA 9
SW+ D++A
Sbjct: 245 SWLEDKYA 252


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 3 WIPDRFAE 10
W+ +RF E
Sbjct: 448 WVGERFGE 455


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 TSWIPDRFAE 10
T IP+ FAE
Sbjct: 162 TKGIPESFAE 171


>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 1 TSWIPDRF 8
T+W+ D+F
Sbjct: 353 TTWVFDKF 360


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 WIPDRFAE 10
WI DR+ E
Sbjct: 845 WIVDRYRE 852


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 IPDRFAE 10
+PDRF E
Sbjct: 140 LPDRFVE 146


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 WIPDRFAE 10
++PDRF E
Sbjct: 133 FLPDRFVE 140




64|SequenceR|325|316|GYLAWTSWIP

>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 1 GYLAWTSWIP 10
GY+++TS IP
Sbjct: 281 GYMSYTSGIP 290


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 GYLAWTS 7
GYLAW +
Sbjct: 1442 GYLAWNA 1448


>sp|RRP42_SULTO|EXOSOME complex component Rrp42|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GYLAWTSWI 9
G WT+W+
Sbjct: 134 GKKVWTAWV 142


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GYLAWTSWIP 10
G + W S++P
Sbjct: 4 GIIGWGSYVP 13


>sp|TRM14_METJA|TRNA (guanine(6)-N2)-methyltransferase|Methanocaldococcus jannaschii

Query: 5 WTSWI 9
WT WI
Sbjct: 84 WTEWI 88


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GYLAWTSWIP 10
G ++W ++IP
Sbjct: 5 GVVSWGAYIP 14


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 1 GYLAWTS 7
GYL WTS
Sbjct: 80 GYLRWTS 86


>sp|PRIS_METPE|DNA primase small subunit PriS|Methanosphaerula palustris (strain ATCC

Query: 1 GYLAW 5
GYLAW
Sbjct: 203 GYLAW 207


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 1 GYLAWTS 7
GY+ WT+
Sbjct: 34 GYIPWTA 40


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 1 GYLAWTS 7
GY+ WT+
Sbjct: 34 GYIPWTA 40


>sp|HMGCS_PYRIL|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GYLAWTSWIP 10
G ++W ++IP
Sbjct: 5 GIVSWGAYIP 14


>sp|HMGCS_PYRAE|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GYLAWTSWIP 10
G ++W ++IP
Sbjct: 5 GIVSWGAYIP 14


>sp|HMGCS_PYRAR|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GYLAWTSWIP 10
G ++W ++IP
Sbjct: 4 GIVSWGAYIP 13


>sp|TRPE1_HALSA|ANTHRANILATE synthase component 1 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GYLAWT 6
GY +WT
Sbjct: 453 GYFSWT 458


>sp|HMGCS_PYRNV|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GYLAWTSWIP 10
G ++W ++IP
Sbjct: 5 GVVSWGAYIP 14


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 WTSWIP 10
W SW P
Sbjct: 188 WKSWTP 193


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 WTSWIP 10
W SW P
Sbjct: 188 WKSWTP 193


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 WTSWIP 10
W SW P
Sbjct: 188 WKSWTP 193


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 WTSWIP 10
W SW P
Sbjct: 190 WKSWTP 195


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GYLAWTSWIP 10
G L W ++IP
Sbjct: 4 GILGWGAYIP 13


>sp|RL15E_PYRAE|LARGE ribosomal subunit protein eL15|Pyrobaculum aerophilum (strain

Query: 1 GYLAWTSW 8
G AW SW
Sbjct: 91 GITAWKSW 98


>sp|TDXH_METJA|PEROXIREDOXIN jannaschii (strain ATCC 43067

Query: 2 YLAWTSWI 9
+L W WI
Sbjct: 78 HLKWVEWI 85


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GYLAWTS 7
GY+ WT+
Sbjct: 332 GYVVWTN 338


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GYLAWTS 7
GY+ WT+
Sbjct: 332 GYVVWTN 338


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 WTSWIP 10
W SW P
Sbjct: 188 WKSWSP 193




65|SequenceR|330|321|QDVARGYLAW

>sp|TRUA_PYRHO|TRNA pseudouridine synthase A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QDVARGYLAW 10
+ +AR YL W
Sbjct: 248 EKIARAYLLW 257


>sp|PGK2_METVS|2-PHOSPHOGLYCERATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QDVARGYLAW 10
+D+A YL W
Sbjct: 78 EDIAEKYLLW 87


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 ARGYLAW 10
+RGY+ W
Sbjct: 339 SRGYIVW 345


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 ARGYLAW 10
+RGY+ W
Sbjct: 334 SRGYVVW 340


>sp|Y1110_METJA|UNCHARACTERIZED protein MJ1110|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 RGYLAW 10
RG+L+W
Sbjct: 377 RGFLSW 382


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 2 DVARGYLAW 10
+ R YLAW
Sbjct: 59 NTERDYLAW 67


>sp|Y372_PYRAE|UPF0284 protein PAE0372|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VARGYLAW 10
VA GY AW
Sbjct: 153 VAMGYDAW 160


>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 5 RGYLAW 10
RG+LAW
Sbjct: 6 RGFLAW 11


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C6

Query: 1 QDVARGYLAW 10
QD+ Y++W
Sbjct: 201 QDLLDAYISW 210


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 ARGYLAW 10
+RGY+ W
Sbjct: 330 SRGYVVW 336


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 ARGYLAW 10
+RGY+ W
Sbjct: 331 SRGYVVW 337


>sp|SECF_METP4|PROTEIN-EXPORT membrane protein SecF|Methanolacinia petrolearia (strain DSM

Query: 2 DVARGYLAW 10
DVA GYL +
Sbjct: 80 DVAAGYLVF 88


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ARGYLAW 10
+RGY+ W
Sbjct: 326 SRGYVVW 332


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 ARGYLAW 10
+RGY+ W
Sbjct: 332 SRGYVVW 338


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QDVARGY 7
+D+A+GY
Sbjct: 333 EDIAKGY 339


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 QDVARGY 7
+D+A+GY
Sbjct: 333 EDIAKGY 339


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QDVARGY 7
+D+A+GY
Sbjct: 333 EDIAKGY 339


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 ARGYLAW 10
+RGY+ W
Sbjct: 330 SRGYVVW 336


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 RGYLAW 10
RGY+ W
Sbjct: 339 RGYVVW 344


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 RGYLAW 10
RGY+ W
Sbjct: 339 RGYVVW 344


>sp|PRIS_METPE|DNA primase small subunit PriS|Methanosphaerula palustris (strain ATCC

Query: 6 GYLAW 10
GYLAW
Sbjct: 203 GYLAW 207




66|SequenceR|335|326|RLVKDQDVAR

>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 RLVKDQDVAR 10
RL++D +VAR
Sbjct: 292 RLIRDPEVAR 301


>sp|RNZ_PYRNV|RIBONUCLEASE Z|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RLVKDQDVA 9
RL+K +DVA
Sbjct: 168 RLIKPEDVA 176


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LVKDQDVAR 10
+ KDQD+ R
Sbjct: 434 ITKDQDIVR 442


>sp|METK_CALMQ|S-ADENOSYLMETHIONINE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RLVKDQD 7
RL+KD+D
Sbjct: 226 RLIKDKD 232


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 3 VKDQDVA 9
VKD+DVA
Sbjct: 7 VKDRDVA 13




67|SequenceR|340|331|IQQAFRLVKD

>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IQQAFRLVKD 10
I+QA +LVKD
Sbjct: 720 IEQAHQLVKD 729


>sp|PYRK_METBF|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina barkeri

Query: 1 IQQAFRLVKD 10
I FRL+KD
Sbjct: 185 ISSVFRLLKD 194


>sp|RS7_HALSA|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain ATCC

Query: 2 QQAFRLVKD 10
QQA ++V+D
Sbjct: 93 QQALKIVRD 101


>sp|RS7_HALS3|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain ATCC

Query: 2 QQAFRLVKD 10
QQA ++V+D
Sbjct: 93 QQALKIVRD 101




68|SequenceR|345|336|FHHLRIQQAF

>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 FHHLRIQQ 8
++HLR+QQ
Sbjct: 50 YYHLRVQQ 57


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 2 HHLRIQQA 9
HH+RI++A
Sbjct: 283 HHVRIEKA 290


>sp|EF1A_PYRIL|ELONGATION factor 1-alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 2 HHLRIQQA 9
HH++++QA
Sbjct: 291 HHMKLEQA 298


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 HHLRIQQA 9
HH++++QA
Sbjct: 291 HHMKLEQA 298


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HHLRIQQA 9
HH++++QA
Sbjct: 291 HHMKLEQA 298


>sp|EF1A_PYRAE|ELONGATION factor 1-alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HHLRIQQA 9
HH++++QA
Sbjct: 291 HHMKLEQA 298


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 HHLRIQQA 9
HH +I+QA
Sbjct: 286 HHEKIEQA 293




69|SequenceR|350|341|LHSSNFHHLR

>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SSNFHHLR 10
S NFHH++
Sbjct: 350 SQNFHHIK 357


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 SSNFHHL 9
+ NFHHL
Sbjct: 420 AENFHHL 426


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SSNFHHL 9
+ NFHHL
Sbjct: 407 AENFHHL 413


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 5 NFHHL 9
NFHHL
Sbjct: 424 NFHHL 428


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 1 LHSSNFHHL 9
+HS +FH L
Sbjct: 487 IHSRDFHRL 495


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LHSSNFHH 8
LH N HH
Sbjct: 238 LHRMNIHH 245


>sp|RIO1_HALVD|RIO-TYPE serine/threonine-protein kinase Rio1|Haloferax volcanii (strain

Query: 1 LHSSNFHHLR 10
+++S+F H+R
Sbjct: 111 INASDFRHMR 120


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 5 NFHHL 9
NFHH+
Sbjct: 234 NFHHI 238


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LHSSNFHHL 9
LH S+F H+
Sbjct: 281 LHDSDFIHI 289


>sp|RIBL_HALUD|FAD synthase|Halorhabdus utahensis (strain DSM 12940

Query: 1 LHSSNFHHLR 10
LH + H+LR
Sbjct: 13 LHPGHLHYLR 22




70|SequenceR|355|346|MDDIELHSSN

>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 1 MDDIELH 7
MDDIE H
Sbjct: 689 MDDIETH 695


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 MDDIELHSS 9
MDD+EL +S
Sbjct: 326 MDDVELSTS 334


>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DDIELHSSN 10
+DIE+H SN
Sbjct: 118 NDIEIHLSN 126




71|SequenceR|360|351|YAPTYMDDIE

>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YAPTYMDDIE 10
YA Y DDIE
Sbjct: 128 YATKYTDDIE 137


>sp|PYRG_METLZ|CTP synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PTYMDDIE 10
PTY+D+IE
Sbjct: 461 PTYIDEIE 468


>sp|MT51_METJA|PUTATIVE type II methyltransferase M.MJ0563P|Methanocaldococcus jannaschii

Query: 2 APTYMDDIE 10
AP +MDDI+
Sbjct: 44 APVWMDDIK 52


>sp|UBIX_AERPE|FLAVIN prenyltransferase UbiX|Aeropyrum pernix (strain ATCC 700893

Query: 1 YAPTYMDD 8
YAP YM++
Sbjct: 65 YAPLYMEN 72


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 YAPTYMDDIE 10
+ PTY DD E
Sbjct: 271 HIPTYYDDPE 280


>sp|Y1764_PYRFU|UPF0173 metal-dependent hydrolase PF1764|Pyrococcus furiosus (strain ATCC

Query: 1 YAPTYMDDIE 10
Y PT +D++E
Sbjct: 93 YGPTKVDEVE 102


>sp|RIB7_METJA|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 APTYMD 7
APTY+D
Sbjct: 186 APTYVD 191


>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 2 APTYMDDI 9
+PT MDD+
Sbjct: 216 SPTLMDDL 223


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 3 PTYMDDIE 10
PTY DIE
Sbjct: 87 PTYQRDIE 94


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 3 PTYMDDIE 10
PTY DIE
Sbjct: 87 PTYQRDIE 94


>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 1 YAPTYMDDI 9
+APT ++D+
Sbjct: 95 FAPTVLEDV 103


Query: 2 APTYMDDIE 10
P Y DDIE
Sbjct: 203 VPLYSDDIE 211


>sp|COBD_METTP|PROBABLE cobalamin biosynthesis protein CobD|Methanothrix thermoacetophila

Query: 1 YAPTYMDDI 9
Y P +DDI
Sbjct: 207 YVPARLDDI 215


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PTYMDDIE 10
P Y+DD+E
Sbjct: 477 PEYIDDLE 484


>sp|KORC_METTH|2-OXOGLUTARATE synthase subunit KorC|Methanothermobacter thermautotrophicus

Query: 4 TYMDDIE 10
TYMDD++
Sbjct: 84 TYMDDLK 90


>sp|KORC_METTM|2-OXOGLUTARATE synthase subunit KorC|Methanothermobacter marburgensis (strain

Query: 4 TYMDDIE 10
TYMDD++
Sbjct: 81 TYMDDLK 87


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 3 PTYMDDIE 10
P Y+DD+E
Sbjct: 477 PEYIDDLE 484


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 YAPTYMDDIE 10
Y Y+DD+E
Sbjct: 787 YRRQYLDDLE 796


>sp|ALF1_HALSA|FRUCTOSE-BISPHOSPHATE aldolase class 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 YAPTYMDDI 9
Y P+Y DD+
Sbjct: 65 YYPSYSDDV 73


>sp|ALF1_HALS3|FRUCTOSE-BISPHOSPHATE aldolase class 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 YAPTYMDDI 9
Y P+Y DD+
Sbjct: 65 YYPSYSDDV 73


>sp|Y1110_METJA|UNCHARACTERIZED protein MJ1110|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YAPTYMDDIE 10
Y TY D+IE
Sbjct: 240 YLNTYKDEIE 249




72|SequenceR|365|356|FDFDGYAPTY

>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FDFDGYAPTY 10
FD GY P Y
Sbjct: 337 FDIPGYVPAY 346


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 2 DFDGYAPT 9
D DGY PT
Sbjct: 317 DHDGYTPT 324


>sp|COFH_META3|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus aeolicus (strain ATCC

Query: 2 DFDGYAPTY 10
DFD YA Y
Sbjct: 2 DFDSYADNY 10


>sp|RL22_CENSY|LARGE ribosomal subunit protein uL22|Cenarchaeum symbiosum (strain A)

Query: 1 FDFDGYAPT 9
+ F+GY PT
Sbjct: 6 YSFEGYDPT 14


>sp|RS13_NANEQ|SMALL ribosomal subunit protein uS13|Nanoarchaeum equitans (strain

Query: 2 DFDGYAPTY 10
D DG+ P Y
Sbjct: 20 DLDGHKPIY 28


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FDFDGYAPTY 10
F+ GY P Y
Sbjct: 337 FEIPGYVPAY 346


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FDFDGYAPTY 10
FDF G+ P Y
Sbjct: 360 FDFPGFVPAY 369


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 FDFDGYAPTY 10
FDF G+ P Y
Sbjct: 360 FDFPGFVPAY 369


>sp|Y2149_ARCFU|UPF0111 protein AF_2149|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DFDGYAPTY 10
DF GYA Y
Sbjct: 172 DFSGYAEWY 180


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DFDGYAP 8
D DG+AP
Sbjct: 84 DVDGFAP 90


>sp|PHS_HALMA|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Haloarcula marismortui

Query: 1 FDFDGY 6
F+FDGY
Sbjct: 29 FEFDGY 34


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 FDGYAPTY 10
FD Y P Y
Sbjct: 61 FDRYEPVY 68


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 4 DGYAPT 9
DGY PT
Sbjct: 58 DGYEPT 63


>sp|ENO_THEAC|ENOLASE acidophilum (strain ATCC 25905

Query: 2 DFDGYA 7
DFDG+A
Sbjct: 281 DFDGFA 286


>sp|SYT_THESM|THREONINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 FDFDGY 6
FDF GY
Sbjct: 179 FDFSGY 184


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 FDFDGY 6
F++DGY
Sbjct: 441 FEYDGY 446


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FDFDGY 6
FDF GY
Sbjct: 169 FDFTGY 174


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 DFDGYAPT 9
DF Y PT
Sbjct: 239 DFSSYRPT 246


>sp|SYT_PYRHO|THREONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FDFDGY 6
FDF GY
Sbjct: 179 FDFTGY 184


>sp|SYT_PYRAB|THREONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 FDFDGY 6
FDF GY
Sbjct: 179 FDFTGY 184


>sp|KAE1_METAR|TRNA N6-adenosine threonylcarbamoyltransferase|Methanocella arvoryzae

Query: 1 FDFDGYA 7
+DFDG A
Sbjct: 66 YDFDGVA 72


>sp|CBP1_PYRFU|THERMOSTABLE carboxypeptidase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GYAPTY 10
GY PTY
Sbjct: 418 GYFPTY 423


>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDFDGY 6
F++DGY
Sbjct: 156 FEYDGY 161


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FDFDGYAP 8
D DGY P
Sbjct: 671 MDLDGYDP 678


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 4 DGYAPTY 10
DG PTY
Sbjct: 440 DGIGPTY 446




73|SequenceR|370|361|FKVEDFDFDG

>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 FKVEDFDFDG 10
FK EDF F+G
Sbjct: 188 FKYEDFTFEG 197


>sp|HMGCS_ARCFU|HYDROXYMETHYLGLUTARYL-COA synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FKVEDFDF 8
+KVEDFD+
Sbjct: 222 YKVEDFDY 229


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 2 KVEDFDFDG 10
K+E+F++DG
Sbjct: 437 KIEEFEYDG 445


>sp|PGK_PICTO|PHOSPHOGLYCERATE kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 FKVEDFDFDG 10
F ++DFD DG
Sbjct: 6 FTMDDFDLDG 15


>sp|BPL_METJA|PUTATIVE biotin ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KVEDFDFDG 10
KV D DFDG
Sbjct: 208 KVYDIDFDG 216


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VEDFDFDG 10
+EDFD +G
Sbjct: 12 IEDFDING 19


>sp|MFNA_METJA|L-TYROSINE/L-ASPARTATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VEDFDFDG 10
VED+D DG
Sbjct: 166 VEDYDVDG 173


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 FKVEDFDFD 9
FK+E+F F+
Sbjct: 10 FKIEEFQFE 18


>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FKVEDFDF 8
+K+ DFD+
Sbjct: 224 YKISDFDY 231


>sp|MCH_METJA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FKVEDFDF 8
FK D+DF
Sbjct: 273 FKAADYDF 280


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FKVEDFDFD 9
FK+ED FD
Sbjct: 38 FKIEDEKFD 46


>sp|NADK_SACS2|NAD kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FKVEDFDFD 9
F+V D DFD
Sbjct: 29 FEVVDIDFD 37


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 2 KVEDFDFDG 10
+V D DFDG
Sbjct: 389 RVFDLDFDG 397


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 KVEDFDFDG 10
K+E ++FDG
Sbjct: 47 KIETYEFDG 55


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 KVEDFDFDG 10
K+E ++FDG
Sbjct: 47 KIETYEFDG 55


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 2 KVEDFDFDG 10
K+ D DFDG
Sbjct: 389 KILDVDFDG 397


>sp|Y1626_PYRHO|MEMO1 family protein PH1626|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KVEDFDFDG 10
++ DFD DG
Sbjct: 222 RILDFDLDG 230


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 KVEDFDFDG 10
K++ FDF+G
Sbjct: 632 KIDGFDFNG 640


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 2 KVEDFDFDG 10
++ DFD DG
Sbjct: 222 RILDFDVDG 230


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VEDFDFDG 10
+ED DF+G
Sbjct: 226 IEDVDFNG 233


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 2 KVEDFDFDG 10
K+E+++ DG
Sbjct: 334 KIEEYEVDG 342


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 2 KVEDFDFDG 10
K+ D DFDG
Sbjct: 389 KILDVDFDG 397


>sp|COBS_METJA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VEDFDFD 9
VEDFDF+
Sbjct: 23 VEDFDFE 29


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 KVEDFDFDG 10
K+E ++FDG
Sbjct: 47 KIEGYEFDG 55


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KVEDFDFDG 10
+VE FDF G
Sbjct: 165 EVEKFDFTG 173


>sp|PGK_PYRHO|PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FKVEDFDF 8
F++EDF+F
Sbjct: 2 FRLEDFNF 9


>sp|PGK_THEKO|PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FKVEDFDFDG 10
F++ DF ++G
Sbjct: 2 FRITDFTYEG 11


>sp|WTPC_PYRAB|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus abyssi (strain GE5 /

Query: 1 FKVEDFDFD 9
FK+ D FD
Sbjct: 14 FKLRDISFD 22


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 3 VEDFDFDG 10
V D DFDG
Sbjct: 390 VRDIDFDG 397


>sp|AATI_METTH|A-TYPE ATP synthase subunit I|Methanothermobacter thermautotrophicus

Query: 2 KVEDFDFD 9
K++DFD D
Sbjct: 157 KLKDFDID 164


>sp|Y2204_ARCFU|UNCHARACTERIZED protein AF_2204|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VEDFDF 8
+EDFDF
Sbjct: 122 MEDFDF 127


>sp|NADK_SACI7|NAD kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FKVEDFDFD 9
F+V D DFD
Sbjct: 29 FEVVDKDFD 37


>sp|NADK_SACI6|NAD kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FKVEDFDFD 9
F+V D DFD
Sbjct: 29 FEVVDKDFD 37


>sp|NADK_SACI4|NAD kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FKVEDFDFD 9
F+V D DFD
Sbjct: 29 FEVVDKDFD 37


>sp|NADK_SACI3|NAD kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FKVEDFDFD 9
F+V D DFD
Sbjct: 29 FEVVDKDFD 37


>sp|NADK_SACI2|NAD kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FKVEDFDFD 9
F+V D DFD
Sbjct: 29 FEVVDKDFD 37


>sp|NADK_SACI1|NAD kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FKVEDFDFD 9
F+V D DFD
Sbjct: 29 FEVVDKDFD 37


>sp|TTUA_METJA|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FKVEDFDF 8
FKVE+ DF
Sbjct: 262 FKVEEEDF 269


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FKVEDFDFD 9
K+ED D+D
Sbjct: 315 LKIEDGDYD 323




74|SequenceR|375|366|DSANPFKVED

>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 2 SANPFKVED 10
S+NPF++++
Sbjct: 2 SSNPFRIQN 10


>sp|NCPP_KORCO|PROBABLE inosine/xanthosine triphosphatase|Korarchaeum cryptofilum (strain

Query: 2 SANPFKVE 9
S NP KVE
Sbjct: 7 STNPVKVE 14


>sp|IF1A2_METBF|TRANSLATION initiation factor 1A 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 ANPFKVED 10
ANP++++D
Sbjct: 84 ANPWEIQD 91


>sp|COFC_ARCPA|2-PHOSPHO-L-LACTATE guanylyltransferase|Archaeoglobus profundus (strain DSM 5631

Query: 2 SANPFKVE 9
S +PFK+E
Sbjct: 51 STHPFKIE 58


>sp|NADK_METKA|NAD kinase|Methanopyrus kandleri (strain AV19 /

Query: 4 NPFKVE 9
NPFK+E
Sbjct: 203 NPFKLE 208


>sp|IF1A3_METAC|TRANSLATION initiation factor 1A 3|Methanosarcina acetivorans (strain ATCC

Query: 3 ANPFKVED 10
ANP++++D
Sbjct: 79 ANPWEIQD 86


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DSANPFKV 8
D+ NP+K+
Sbjct: 191 DNVNPYKI 198




75|SequenceR|380|371|LRRFMDSANP

>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 RFMDSANP 10
RFMD NP
Sbjct: 124 RFMDLRNP 131


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RFMDSANP 10
RFMD NP
Sbjct: 124 RFMDLRNP 131


>sp|IDI2_METB6|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanoregula boonei (strain DSM 21154

Query: 2 RRFMDSANP 10
R+ MD NP
Sbjct: 350 RQMMDDGNP 358


>sp|FLPA_METVS|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus vannielii (strain

Query: 1 LRRFMDSAN 9
+R F+DS N
Sbjct: 111 MREFIDSCN 119


>sp|FLPA_METM5|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 1 LRRFMDSAN 9
+R F+DS N
Sbjct: 111 MREFIDSCN 119


>sp|FLPA_METMP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 1 LRRFMDSAN 9
+R F+DS N
Sbjct: 111 MREFIDSCN 119


>sp|FLPA_METM7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 1 LRRFMDSAN 9
+R F+DS N
Sbjct: 111 MREFIDSCN 119


>sp|FLPA_METM6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 1 LRRFMDSAN 9
+R F+DS N
Sbjct: 111 MREFIDSCN 119




76|SequenceR|385|376|FGADRLRRFM

>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 4 DRLRRFM 10
DR+RR+M
Sbjct: 122 DRIRRYM 128


>sp|COBD_METTP|PROBABLE cobalamin biosynthesis protein CobD|Methanothrix thermoacetophila

Query: 4 DRLRRFM 10
DRLRR M
Sbjct: 39 DRLRRMM 45


>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GADRLRRFM 10
G++RLR F+
Sbjct: 275 GSERLREFI 283


>sp|PRIS_METJA|DNA primase small subunit PriS|Methanocaldococcus jannaschii (strain

Query: 2 GADRLRRF 9
G D LRRF
Sbjct: 281 GLDELRRF 288


>sp|MTXX_METBF|PUTATIVE methyltransferase mtx subunit X|Methanosarcina barkeri (strain

Query: 1 FGADRLRRF 9
GA+ +RRF
Sbjct: 135 LGAEHIRRF 143




77|SequenceR|390|381|WLTVRFGADR

>sp|IF2A_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 WLTVRFGAD 9
WLT+ FG D
Sbjct: 104 WLTLAFGED 112


>sp|IF2A_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 WLTVRFGAD 9
WLT+ FG D
Sbjct: 104 WLTLAFGED 112


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WLTVRFGAD 9
WL+ +FGA+
Sbjct: 22 WLSEKFGAE 30


>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 WLTVRFGAD 9
WL +FGA+
Sbjct: 20 WLKEKFGAE 28


>sp|NASB_HALMT|PROBABLE nitrate transporter|Haloferax mediterranei (strain ATCC 33500

Query: 1 WLTVRFGAD 9
WL+ RFGA
Sbjct: 67 WLSDRFGAS 75


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WLTVRFGADR 10
W T R+GA++
Sbjct: 338 WNTGRYGAEK 347


>sp|IXTPA_KORCO|DITP/XTP pyrophosphatase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 VRFGADR 10
+RFG+DR
Sbjct: 176 MRFGSDR 182


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 WLTVRFG 7
WL RFG
Sbjct: 1047 WLETRFG 1053


>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 LTVRFGADR 10
L RFGAD
Sbjct: 23 LLARFGADE 31




78|SequenceR|395|386|VFPHVWLTVR

>sp|MER_METBF|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FPHVWLT 8
F HVW+T
Sbjct: 28 FDHVWIT 34


>sp|RL2_HYPBU|LARGE ribosomal subunit protein uL2|Hyperthermus butylicus (strain DSM

Query: 3 PHVWLTVR 10
PHVW VR
Sbjct: 183 PHVWPRVR 190


>sp|Y3539_METJA|UPF0252 protein MJECL39|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFPHVWL 7
+FP VWL
Sbjct: 71 IFPEVWL 77


>sp|TRPA_AERPE|TRYPTOPHAN synthase alpha chain|Aeropyrum pernix (strain ATCC 700893

Query: 2 FPHVWL 7
FPH WL
Sbjct: 147 FPHRWL 152


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 3 PHVWLTV 9
PH W TV
Sbjct: 192 PHTWDTV 198


>sp|PANB_PYRIL|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PHVWLT 8
P+VW+T
Sbjct: 15 PYVWIT 20


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FPHVWLTVR 10
FP W TVR
Sbjct: 582 FPFKWETVR 590


>sp|ILVC_PYRCJ|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum calidifontis (strain DSM

Query: 3 PHVW 6
PHVW
Sbjct: 87 PHVW 90


>sp|G1PDH_IGNH4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PHVW 6
PHVW
Sbjct: 43 PHVW 46


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PHVWLTVR 10
P+ W+T+R
Sbjct: 282 PYEWITLR 289


>sp|PANB_PYRAE|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC

Query: 3 PHVWLT 8
P+VW+T
Sbjct: 16 PYVWVT 21


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 1 VFPHVWLT 8
VF H W T
Sbjct: 119 VFEHAWKT 126


>sp|PANB_PYRAR|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM

Query: 3 PHVWLT 8
P+VW+T
Sbjct: 17 PYVWVT 22


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 VFPHVWLTV 9
++ HVW+ +
Sbjct: 782 LYAHVWMLI 790




79|SequenceR|400|391|SSNYNVFPHV

>sp|WTPC_PYRHO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus horikoshii (strain

Query: 3 NYNVFPHV 10
NY +FPH+
Sbjct: 80 NYALFPHM 87


>sp|GLMS_SULAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfolobus acidocaldarius (strain

Query: 2 SNYNVFPHV 10
++YN PHV
Sbjct: 84 TDYNAHPHV 92


>sp|RPO5_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo5|Pyrococcus abyssi (strain GE5 /

Query: 2 SNYNVFPHV 10
S +N+F HV
Sbjct: 5 SEFNIFKHV 13


>sp|GCH3_SACS2|GTP cyclohydrolase III|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SSNYNVFP 8
+S YN FP
Sbjct: 41 ASQYNTFP 48


>sp|SYY_METLZ|TYROSINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 YNVFPHV 10
YNVFP +
Sbjct: 250 YNVFPRM 256


>sp|Y1493_THEPD|UPF0173 metal-dependent hydrolase Tpen_1493|Thermofilum pendens (strain DSM

Query: 3 NYNVFPHV 10
+YN FP +
Sbjct: 190 HYNTFPEI 197


>sp|DMSB_HALSA|PUTATIVE dimethyl sulfoxide reductase iron-sulfur|Halobacterium salinarum

Query: 2 SNYNVFPHV 10
+ Y+V PHV
Sbjct: 245 NGYDVTPHV 253


>sp|RPO5_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo5|Pyrococcus horikoshii (strain ATCC

Query: 2 SNYNVFPHV 10
+ +N+F HV
Sbjct: 5 NEFNIFKHV 13


>sp|SODF_METTM|SUPEROXIDE dismutase [Fe]|Methanothermobacter marburgensis (strain ATCC

Query: 3 NYNVFPH 9
N NV PH
Sbjct: 150 NVNVIPH 156


>sp|SODF_METTH|SUPEROXIDE dismutase [Fe]|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 NYNVFPH 9
N NV PH
Sbjct: 153 NVNVIPH 159




80|SequenceR|405|396|GEGFRSSNYN

>sp|GFCR_THEVO|TRANSCRIPTIONAL regulator GfcR|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EGFRSSNY 9
EGF SSN+
Sbjct: 124 EGFFSSNF 131


>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GEGFRSSNY 9
G FR+ NY
Sbjct: 291 GRAFRTQNY 299


>sp|GFCR_PICTO|TRANSCRIPTIONAL regulator GfcR|Picrophilus torridus (strain ATCC 700027

Query: 2 EGFRSSNY 9
EGF SSN+
Sbjct: 124 EGFFSSNF 131


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 1 GEGFRSSN 8
G GFRS N
Sbjct: 106 GAGFRSLN 113


>sp|Y3511_METJA|UNCHARACTERIZED protein MJECL11|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GEGFRSS 7
GEGF+S+
Sbjct: 2 GEGFKSA 8




81|SequenceR|410|401|LEREVGEGFR

>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LEREVGEGF 9
+ ++VGEGF
Sbjct: 195 IAKQVGEGF 203


>sp|IDI2_META3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LEREVGEGF 9
+ ++VGEGF
Sbjct: 199 IAKQVGEGF 207


>sp|Y975_METBF|UPF0200 protein Mbar_A0975|Methanosarcina barkeri (strain Fusaro /

Query: 3 REVGEGF 9
RE+GEGF
Sbjct: 99 RELGEGF 105


>sp|UPPP_HALMA|UNDECAPRENYL-DIPHOSPHATASE marismortui (strain ATCC 43049

Query: 2 EREVGEGF 9
ERE+ +GF
Sbjct: 146 EREIPDGF 153


>sp|Y2167_ARCFU|UNCHARACTERIZED protein AF_2167|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EREVGE 7
EREVGE
Sbjct: 68 EREVGE 73


>sp|OGG1_METJA|8-OXOGUANINE DNA glycosylase/AP lyase|Methanocaldococcus jannaschii (strain

Query: 1 LEREVGEGF 9
+++E+G+GF
Sbjct: 58 IQKEIGDGF 66


>sp|IDI2_METJA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEREVGEGF 9
+ ++VGEGF
Sbjct: 197 IAKQVGEGF 205


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 1 LEREVGEG 8
LER+ G+G
Sbjct: 360 LERQAGDG 367


>sp|PFDA_ARCFU|PREFOLDIN subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEREVGEGF 9
+EREVGE
Sbjct: 87 VEREVGEAI 95


>sp|CSG_METAC|MAJOR S-layer protein|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EREVGEGF 9
E E+GEG
Sbjct: 287 EEEIGEGL 294


Query: 2 EREVGEG 8
E E+GEG
Sbjct: 564 EEEIGEG 570


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 1 LEREVGEG 8
LER+ G+G
Sbjct: 360 LERQAGDG 367


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 1 LEREVGEG 8
LER+ GEG
Sbjct: 360 LERQEGEG 367


>sp|ARLY_HALSA|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LEREVGEGF 9
LE GEGF
Sbjct: 352 LEAAAGEGF 360


>sp|ARLY_HALS3|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LEREVGEGF 9
LE GEGF
Sbjct: 352 LEAAAGEGF 360




82|SequenceR|415|406|PERVFLEREV

>sp|RS5_HALMA|SMALL ribosomal subunit protein uS5|Haloarcula marismortui (strain ATCC

Query: 1 PERVFLEREV 10
PER F +REV
Sbjct: 201 PERTFEKREV 210


>sp|PYRI_PICTO|ASPARTATE carbamoyltransferase regulatory chain|Picrophilus torridus

Query: 2 ERVFLERE 9
E VFLE+E
Sbjct: 58 ENVFLEKE 65


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ERVFLERE 9
+R F+ERE
Sbjct: 299 QRAFIERE 306


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PERVFLEREV 10
P+R F+E EV
Sbjct: 1001 PQREFIENEV 1010


>sp|RFRNP_IGNH4|RNA-FREE ribonuclease P|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PERVFLE 7
P RVFLE
Sbjct: 91 PARVFLE 97


>sp|CDC6_METLZ|ORC1-TYPE DNA replication protein|Methanocorpusculum labreanum (strain ATCC

Query: 1 PERVFLEREV 10
P ++F REV
Sbjct: 18 PNKIFQNREV 27


>sp|RL14E_THEON|LARGE ribosomal subunit protein eL14|Thermococcus onnurineus (strain

Query: 1 PERVFLER 8
PERV +ER
Sbjct: 57 PERVNIER 64


>sp|RL14E_THEGJ|LARGE ribosomal subunit protein eL14|Thermococcus gammatolerans (strain

Query: 1 PERVFLER 8
PERV +ER
Sbjct: 57 PERVNIER 64


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PERVFLEREV 10
P V+LE+EV
Sbjct: 613 PTLVYLEKEV 622


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 PERVFLEREV 10
P+R F+E EV
Sbjct: 1001 PQREFVENEV 1010


>sp|PUR2_METMJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ERVFLEREV 10
ERV LE+E
Sbjct: 45 ERVLLEKET 53


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 2 ERVFLER 8
ERVFL+R
Sbjct: 241 ERVFLKR 247




83|SequenceR|420|411|PLRGTPERVF

>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 RGTPERV 9
RGTPE++
Sbjct: 21 RGTPEKI 27


>sp|IF6_METLZ|TRANSLATION initiation factor 6|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PLRGTPERV 9
P R TPE +
Sbjct: 156 PARSTPEEI 164


>sp|CHED_HALMA|PROBABLE chemoreceptor glutamine deamidase CheD|Haloarcula marismortui

Query: 1 PLRGTPERV 9
P + TPER+
Sbjct: 12 PEQSTPERI 20


>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PLRGTPE 7
PLR TPE
Sbjct: 480 PLRRTPE 486


>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 3 RGTPERVF 10
RGT RVF
Sbjct: 55 RGTKRRVF 62


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 3 RGTPERVF 10
RGT RVF
Sbjct: 55 RGTKRRVF 62


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 3 RGTPERVF 10
RGT RVF
Sbjct: 55 RGTKRRVF 62


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 3 RGTPERVF 10
RGT RVF
Sbjct: 55 RGTKRRVF 62


>sp|NFI_PYRAB|ENDONUCLEASE V|Pyrococcus abyssi (strain GE5 /

Query: 2 LRGTPERVF 10
LRGTPE +
Sbjct: 127 LRGTPENSY 135


>sp|XDH2_HALVD|D-XYLOSE 1-dehydrogenase (NADP(+)) 2|Haloferax volcanii (strain ATCC 29605

Query: 4 GTPERVF 10
GTP+RV+
Sbjct: 187 GTPDRVY 193


>sp|RSMA_METKA|PROBABLE ribosomal RNA small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 LRGTPERVF 10
LRG P R F
Sbjct: 172 LRGVPRRAF 180


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LRGTPERVF 10
L+GTPE+ +
Sbjct: 360 LQGTPEKNY 368


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 1 PLRGTPERV 9
P+ G PER+
Sbjct: 47 PVYGIPERI 55


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PLRGTPERV 9
P+ G PER+
Sbjct: 47 PVYGIPERI 55


>sp|NFI_THEKO|ENDONUCLEASE V|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LRGTPE 7
LRGTPE
Sbjct: 133 LRGTPE 138


>sp|ECFA_METAC|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 LRGTPERVF 10
L GTPE V
Sbjct: 215 LEGTPENVL 223


>sp|Y1626_PYRHO|MEMO1 family protein PH1626|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PLRGTPERV 9
P RG PE +
Sbjct: 200 PFRGRPEEL 208


>sp|APGM_IGNH4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PLRGTPE 7
PLR TPE
Sbjct: 184 PLRDTPE 190


>sp|MTSA_METMA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GTPERVF 10
GTPE+V+
Sbjct: 289 GTPEQVY 295


>sp|MTSA_METBA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina barkeri

Query: 4 GTPERVF 10
GTPE+V+
Sbjct: 289 GTPEQVY 295


>sp|UPP_NATPD|URACIL phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 RGTPERVF 10
+GTPER+
Sbjct: 164 QGTPERLV 171


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 1 PLRGTP 6
PLRG+P
Sbjct: 299 PLRGSP 304


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 LRGTPERV 9
+ GTP+RV
Sbjct: 963 INGTPQRV 970




84|SequenceR|425|416|WRVLAPLRGT

>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 WRVLAPLR 8
WR+L PLR
Sbjct: 454 WRLLDPLR 461


>sp|G1PDH_SACI6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.4 /

Query: 1 WRVLAPLRG 9
WR+ A LRG
Sbjct: 182 WRLAAKLRG 190


>sp|G1PDH_SACI4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.14.25 /

Query: 1 WRVLAPLRG 9
WR+ A LRG
Sbjct: 182 WRLAAKLRG 190


>sp|G1PDH_SACI3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.27)

Query: 1 WRVLAPLRG 9
WR+ A LRG
Sbjct: 182 WRLAAKLRG 190


>sp|G1PDH_SACI7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 WRVLAPLRG 9
WR+ A LRG
Sbjct: 182 WRLAAKLRG 190


>sp|G1PDH_SACI2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 WRVLAPLRG 9
WR+ A LRG
Sbjct: 182 WRLAAKLRG 190


>sp|G1PDH_SACI1|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 WRVLAPLRG 9
WR+ A LRG
Sbjct: 182 WRLAAKLRG 190


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 WRVLAPLRGT 10
W VL P RGT
Sbjct: 39 WGVLEPERGT 48


>sp|RL2_CALMQ|LARGE ribosomal subunit protein uL2|Caldivirga maquilingensis (strain

Query: 1 WRVLAPLR 8
WR +APLR
Sbjct: 22 WRRIAPLR 29


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 1 WRVLAPLRGT 10
WR + P RGT
Sbjct: 39 WRRIEPERGT 48


>sp|RPIA_AERPE|RIBOSE-5-PHOSPHATE isomerase A|Aeropyrum pernix (strain ATCC 700893

Query: 1 WRVLAPLRG 9
+RVL P RG
Sbjct: 226 YRVLGPYRG 234


>sp|HJE_SACS2|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus solfataricus

Query: 1 WRVLAP 6
WRVL P
Sbjct: 96 WRVLVP 101


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WRVLAP 6
WR+L P
Sbjct: 172 WRILTP 177


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 WRVLAP 6
WR+L P
Sbjct: 173 WRILTP 178


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WRVLAP 6
WR+L P
Sbjct: 173 WRILTP 178


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WRVLAP 6
WR+L P
Sbjct: 173 WRILTP 178


>sp|G1PDH_SACS2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus solfataricus (strain ATCC

Query: 1 WRVLAPLRG 9
W++ A LRG
Sbjct: 182 WKLAAKLRG 190


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 1 WRVLAPLRG 9
W V+ PL G
Sbjct: 208 WGVIGPLAG 216


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 1 WRVLAPLRG 9
W V+ PL G
Sbjct: 209 WGVIGPLAG 217


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 RVLAPLRGT 10
RVL LRGT
Sbjct: 385 RVLEDLRGT 393


>sp|G1PDH_SULTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WRVLAPLRG 9
W++ A LRG
Sbjct: 181 WQLAAKLRG 189


>sp|Y38K_THETE|UNCHARACTERIZED 38 kDa protein in|Thermoproteus tenax

Query: 1 WRVLAPLRG 9
W +LAP+ G
Sbjct: 25 WNLLAPMIG 33




85|SequenceR|430|421|GIGNWWRVLA

>sp|Y2215_HALMD|PUTATIVE lipoprotein Hmuk_2215|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 GIGNWWRV 8
G +WW+V
Sbjct: 114 GYADWWQV 121


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 GNWWRVL 9
G WW+++
Sbjct: 126 GKWWKIV 132


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 3 GNWWRVL 9
G WW+++
Sbjct: 126 GKWWKIV 132


>sp|HIS6_METS5|IMIDAZOLE glycerol phosphate synthase subunit|Metallosphaera sedula (strain

Query: 2 IGNWWRVL 9
+GN WRV
Sbjct: 134 VGNGWRVF 141


>sp|Y1348_METJA|UNCHARACTERIZED protein MJ1348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIGNWWRVL 9
G GNW R L
Sbjct: 190 GAGNWKRFL 198


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 3 GNWWR 7
G WWR
Sbjct: 364 GKWWR 368


>sp|GYAR_AERPE|GLYOXYLATE reductase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GNWWRV 8
G WWR+
Sbjct: 130 GEWWRL 135


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GNWWR 7
G WWR
Sbjct: 364 GKWWR 368


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 3 GNWWRVL 9
G WW V+
Sbjct: 127 GKWWSVV 133


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 4 NWWRVLA 10
NW+ VLA
Sbjct: 144 NWYEVLA 150


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIGNWWR 7
G G+WW+
Sbjct: 365 GWGSWWK 371


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GNWWR 7
G WWR
Sbjct: 361 GKWWR 365


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 3 GNWWR 7
G WWR
Sbjct: 361 GKWWR 365


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 NWWRV 8
NWW++
Sbjct: 138 NWWKM 142


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IGNWWRV 8
+G WW++
Sbjct: 368 LGRWWQL 374


>sp|Y1587_METJA|UNCHARACTERIZED protein MJ1587|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIGNWWRV 8
GIG +W++
Sbjct: 13 GIGKFWKL 20


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GNWWR 7
G WWR
Sbjct: 366 GKWWR 370


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 IGNWWRV 8
+G WW++
Sbjct: 373 LGRWWQL 379


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 IGNWWRV 8
+G WW++
Sbjct: 373 LGRWWQL 379


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 IGNWWRV 8
+G WW++
Sbjct: 373 LGRWWQL 379


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 IGNWWRV 8
+G WW++
Sbjct: 373 LGRWWQL 379


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 IGNWWRV 8
+G WW++
Sbjct: 373 LGRWWQL 379


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 2 IGNWWRV 8
+G WW++
Sbjct: 373 LGRWWQL 379


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 IGNWWRV 8
+G WW++
Sbjct: 373 LGRWWQL 379


>sp|TRM56_METKA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanopyrus kandleri

Query: 2 IGNWWRVL 9
+GNW RV+
Sbjct: 68 VGNWRRVI 75


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IGNWWRVL 9
IG WW ++
Sbjct: 352 IGRWWSII 359


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GNWWRV 8
G WWR+
Sbjct: 507 GYWWRI 512


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 2 IGNWW 6
+ NWW
Sbjct: 442 VANWW 446


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 2 IGNWW 6
+ NWW
Sbjct: 442 VANWW 446


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 2 IGNWW 6
+ NWW
Sbjct: 442 VANWW 446


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 2 IGNWW 6
+ NWW
Sbjct: 442 VANWW 446


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 IGNWW 6
+ NWW
Sbjct: 442 VANWW 446


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 IGNWW 6
+ NWW
Sbjct: 442 VANWW 446


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 IGNWW 6
+ NWW
Sbjct: 442 VANWW 446


>sp|SODF_PYRAE|SUPEROXIDE dismutase [Fe]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IGNWWRVL 9
+ NWW V+
Sbjct: 183 VDNWWNVV 190


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 2 IGNWWRVLA 10
+G WW+ LA
Sbjct: 426 LGVWWKYLA 434


>sp|SODF_AERPE|SUPEROXIDE dismutase [Mn/Fe]|Aeropyrum pernix (strain ATCC 700893

Query: 2 IGNWWRVL 9
+ NWW V+
Sbjct: 183 VENWWNVV 190


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 2 IGNWWRVL 9
IGN W+V+
Sbjct: 115 IGNGWKVI 122


>sp|SODF_ACIAM|SUPEROXIDE dismutase [Fe]|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 IGNWWRVL 9
+ NWW ++
Sbjct: 189 VNNWWNLV 196


>sp|MRE11_PYRHO|DNA double-strand break repair protein|Pyrococcus horikoshii (strain

Query: 2 IGNWWRV 8
+GN+W V
Sbjct: 124 VGNYWLV 130




86|SequenceR|435|426|FDLVAGIGNW

>sp|G1PDH_PYRCJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum calidifontis (strain DSM

Query: 1 FDLVAGIG 8
FDLV GIG
Sbjct: 72 FDLVIGIG 79


>sp|G1PDH_PYRIL|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FDLVAGIG 8
FDLV G+G
Sbjct: 75 FDLVLGVG 82


>sp|LYSJ_PYRAB|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 FDLVAGIG 8
DL+AGIG
Sbjct: 27 LDLIAGIG 34


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 FDLVAGIG 8
DL+AGIG
Sbjct: 27 LDLIAGIG 34


>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 DLVAGIG 8
DL+AGIG
Sbjct: 28 DLIAGIG 34


>sp|LYSJ_PYRHO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 DLVAGIG 8
DL+AGIG
Sbjct: 28 DLIAGIG 34


>sp|TRM5B_PYRAB|TRNA (guanine(37)-N(1))-methyltransferase Trm5b|Pyrococcus abyssi

Query: 1 FDLVAGIG 8
FD+ AG+G
Sbjct: 187 FDMFAGVG 194


>sp|G1PDH_PYRNV|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 FDLVAGIG 8
FDL+ G+G
Sbjct: 75 FDLIIGVG 82


>sp|G1PDH_NITMS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Nitrosopumilus maritimus (strain SCM1)

Query: 2 DLVAGIG 8
D++AGIG
Sbjct: 95 DMIAGIG 101


>sp|Y916_METJA|UNCHARACTERIZED protein MJ0916|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDLVAGIGN 9
F+L+ IGN
Sbjct: 64 FNLITAIGN 72


>sp|G1PDH_PYRAE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FDLVAGIG 8
+DLV G+G
Sbjct: 75 YDLVIGVG 82


>sp|Y924_ARCFU|UNCHARACTERIZED protein AF_0924|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DLVAGIGNW 10
D +AG NW
Sbjct: 137 DKIAGSANW 145


>sp|APT_CENSY|ADENINE phosphoribosyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 FDLVAGI 7
FD++AGI
Sbjct: 49 FDVIAGI 55


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FDLVAGIG 8
+DLV G+G
Sbjct: 75 YDLVLGVG 82


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LVAGIGNW 10
L+AGI +W
Sbjct: 263 LMAGIDDW 270


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 3 LVAGIGNW 10
L+AGI +W
Sbjct: 285 LMAGIDDW 292


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 3 LVAGIGNW 10
L+AGI +W
Sbjct: 285 LMAGIDDW 292


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 3 LVAGIGNW 10
L+AGI +W
Sbjct: 285 LMAGIDDW 292


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 DLVAGIGNW 10
D+V G NW
Sbjct: 578 DIVKGTVNW 586


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 3 LVAGIGNW 10
L+AG+G W
Sbjct: 515 LMAGVGVW 522


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 DLVAGIG 8
DL+AG+G
Sbjct: 162 DLIAGLG 168


>sp|Y2548_METHJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanospirillum

Query: 1 FDLVAGIG 8
FD++AG G
Sbjct: 32 FDIIAGNG 39


>sp|KCY_METTP|CYTIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FDLVAGIGNW 10
+DL+ G W
Sbjct: 146 YDLIIDTGRW 155


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DLVAGIG 8
DL+AG+G
Sbjct: 264 DLMAGVG 270




87|SequenceR|440|431|AKPHTFDLVA

>sp|PELO_PYRAR|PROTEIN pelota homolog|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 AKPHTFDLVA 10
+ HTFD+VA
Sbjct: 92 GRRHTFDIVA 101


>sp|Y2347_METMJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanoculleus

Query: 2 KPHTFDLVA 10
+P +FDL+A
Sbjct: 28 RPRSFDLIA 36


>sp|Y031_METPE|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaerula

Query: 2 KPHTFDLVA 10
+P +FDL+A
Sbjct: 28 RPRSFDLIA 36


>sp|Y195_METB6|PUTATIVE HTH-type transcriptional regulatory protein|Methanoregula boonei

Query: 2 KPHTFDLVA 10
+P +FDL+A
Sbjct: 28 RPRSFDLIA 36


>sp|Y1787_ARCFU|PUTATIVE HTH-type transcriptional regulatory protein|Archaeoglobus

Query: 2 KPHTFDLVA 10
KP FD+VA
Sbjct: 27 KPRCFDIVA 35


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KPHTFDLV 9
KPH+ DL+
Sbjct: 309 KPHSHDLM 316


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PHTFDL 8
PH FDL
Sbjct: 279 PHPFDL 284


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 AKPHTFDLV 9
A+P T DL+
Sbjct: 426 AEPETLDLI 434


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 1 AKPHTFDLV 9
A+P T DL+
Sbjct: 426 AEPETLDLI 434


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KPHTFDLV 9
KPH+ DL+
Sbjct: 309 KPHSHDLM 316


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PHTFDL 8
PH FDL
Sbjct: 92 PHPFDL 97


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 3 PHTFDLV 9
PHT+D V
Sbjct: 192 PHTWDTV 198


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KPHTFDLV 9
KPH+ DL+
Sbjct: 309 KPHSHDLM 316


>sp|PELO_PYRNV|PROTEIN pelota homolog|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 AKPHTFDLV 9
+ HTFD+V
Sbjct: 92 GRRHTFDVV 100


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KPHTFDLV 9
KPH DL+
Sbjct: 308 KPHNHDLM 315


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 KPHTFDLV 9
KPH DL+
Sbjct: 312 KPHNHDLM 319


>sp|Y638_METJA|UNCHARACTERIZED protein MJ0638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KPHTFDLV 9
K +TFDLV
Sbjct: 99 KDNTFDLV 106




88|SequenceR|445|436|QFWDRAKPHT

>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FWDRAKP 8
WDR KP
Sbjct: 79 LWDRQKP 85


>sp|DHQS_METB6|3-DEHYDROQUINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 QFWDRAKP 8
QFW A+P
Sbjct: 3 QFWVDARP 10


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 1 QFWDRAKPH 9
+ WD+ K H
Sbjct: 238 ELWDKIKEH 246


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QFWDRAKPH 9
+ WDR + H
Sbjct: 362 KLWDRVEDH 370


>sp|RNP4_METJA|RIBONUCLEASE P protein component 4|Methanocaldococcus jannaschii (strain ATCC

Query: 3 WDRAK 7
WDRAK
Sbjct: 33 WDRAK 37




89|SequenceR|450|441|RRLHGQFWDR

>sp|DMSB_HALSA|PUTATIVE dimethyl sulfoxide reductase iron-sulfur|Halobacterium salinarum

Query: 5 GQFWDR 10
GQFW+R
Sbjct: 32 GQFWNR 37


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LHGQFWD 9
LHG FW+
Sbjct: 418 LHGLFWN 424


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 1 RRLHGQFWDR 10
R LHG W +
Sbjct: 444 RELHGTHWGK 453


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 RRLHGQFWDR 10
R LHG W R
Sbjct: 441 RDLHGTQWGR 450


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RRLHGQFW 8
R L+G++W
Sbjct: 59 RELYGEYW 66


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RRLHGQFW 8
R L+G++W
Sbjct: 59 RELYGEYW 66


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 RRLHGQFWDR 10
R LHG W R
Sbjct: 455 RDLHGTHWGR 464


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 RRLHGQFWDR 10
R LHG W R
Sbjct: 443 RDLHGTQWGR 452


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RRLHGQFW 8
R L+G++W
Sbjct: 59 RELYGEYW 66


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 RRLHGQFWDR 10
R LHG W R
Sbjct: 443 RDLHGTQWGR 452


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RRLHGQFWDR 10
R+L +FW++
Sbjct: 824 RKLQTEFWEQ 833


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 RRLHGQFWD 9
+ L G FWD
Sbjct: 12 KDLKGDFWD 20


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 1 RRLHGQ 6
RRLHGQ
Sbjct: 184 RRLHGQ 189


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RRLHGQFW 8
R L+G++W
Sbjct: 59 RELYGEYW 66


>sp|G1PDH_THEKO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus kodakarensis (strain ATCC

Query: 3 LHGQFWDR 10
LHG W+R
Sbjct: 282 LHGMKWER 289


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RRLHGQFW 8
R L+G++W
Sbjct: 59 RELYGEYW 66


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RRLHGQFW 8
R L+G++W
Sbjct: 59 RELYGEYW 66


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RRLHGQFW 8
+R+H ++W
Sbjct: 348 KRVHSKYW 355


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RRLHGQFW 8
R L+G++W
Sbjct: 59 RELYGEYW 66


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RLHGQFWD 9
+L GQ WD
Sbjct: 319 KLEGQKWD 326


>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 3 LHGQFWDR 10
LHG+ W R
Sbjct: 283 LHGKNWRR 290


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 2 RLHGQFW 8
R HG+FW
Sbjct: 390 RAHGRFW 396


>sp|GCH3_PYRAR|GTP cyclohydrolase III|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RLHGQFW 8
R+HG W
Sbjct: 33 RIHGALW 39


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HGQFW 8
HGQ W
Sbjct: 239 HGQIW 243


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 4 HGQFW 8
HGQ W
Sbjct: 237 HGQIW 241


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 4 HGQFW 8
HGQ W
Sbjct: 233 HGQIW 237


>sp|FEN_HALSA|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 700922

Query: 4 HGQFWD 9
HG WD
Sbjct: 246 HGDLWD 251


>sp|FEN_HALS3|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 29341

Query: 4 HGQFWD 9
HG WD
Sbjct: 246 HGDLWD 251


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 4 HGQFW 8
HGQ W
Sbjct: 233 HGQIW 237




90|SequenceR|455|446|YRSRLRRLHG

>sp|PYRDB_METKA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanopyrus kandleri (strain

Query: 1 YRSRLRRL 8
YR RLRRL
Sbjct: 307 YRERLRRL 314


>sp|QUED_PYRAB|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Pyrococcus abyssi

Query: 1 YRSRLRRLHG 10
Y S+ RRLHG
Sbjct: 27 YESKCRRLHG 36


>sp|QUED_PYRHO|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Pyrococcus horikoshii

Query: 1 YRSRLRRLHG 10
Y S+ +R+HG
Sbjct: 27 YESKCKRIHG 36


>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 YRSRLRRLHG 10
YR RLR + G
Sbjct: 4 YRKRLRLVKG 13


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 3 SRLRRLHG 10
R+RRLHG
Sbjct: 181 DRVRRLHG 188


>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 SRLRRLH 9
+RLRR+H
Sbjct: 320 TRLRRIH 326


>sp|NK_METTH|NUCLEOSIDE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 RLRRLHG 10
R+R LHG
Sbjct: 35 RMRNLHG 41


>sp|TYSY_METBF|PUTATIVE thymidylate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YRSRLRRLHG 10
Y RLR HG
Sbjct: 91 YGQRLRNWHG 100


>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YRSRLRRLHG 10
Y S ++RL+G
Sbjct: 414 YESMMKRLNG 423


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 YRSRLRRLHG 10
YR RLR + G
Sbjct: 4 YRKRLRLVRG 13


>sp|AGOG_METKA|N-GLYCOSYLASE/DNA lyase|Methanopyrus kandleri (strain AV19 /

Query: 2 RSRLRRLH 9
R +LRRLH
Sbjct: 97 RQKLRRLH 104




91|SequenceR|460|451|FSAVSYRSRL

***** No hits found ******


92|SequenceR|465|456|GADFKFSAVS

>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 1 GADFKFSAVS 10
GADFKF ++
Sbjct: 119 GADFKFEPLT 128


>sp|TRM56_METM6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 1 GADFKFSAV 9
G DFKF V
Sbjct: 55 GGDFKFEVV 63


>sp|TRM56_METM5|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 1 GADFKFSAV 9
G DFKF V
Sbjct: 55 GGDFKFEVV 63


>sp|TRM56_META3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus aeolicus

Query: 1 GADFKFSAV 9
G DFKF V
Sbjct: 55 GGDFKFDVV 63


>sp|CPGS_THESM|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus sibiricus (strain

Query: 1 GADFKFS 7
GADF+FS
Sbjct: 103 GADFEFS 109


>sp|CPGS_METS3|CYCLIC 2,3-diphosphoglycerate synthetase|Methanobrevibacter smithii

Query: 1 GADFKFSAVS 10
G DFKF V+
Sbjct: 118 GPDFKFDPVT 127


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 1 GADFKFSA 8
GADF+F A
Sbjct: 102 GADFEFRA 109


>sp|PRNK_PYRFU|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PF0112|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ADFKFSAVS 10
AD KFS++S
Sbjct: 83 ADMKFSSLS 91


>sp|CPGS_METST|CYCLIC 2,3-diphosphoglycerate synthetase|Methanosphaera stadtmanae (strain

Query: 1 GADFKFSAV 9
G+DF+F A+
Sbjct: 120 GSDFEFKAL 128


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 ADFKFSAVS 10
DF+FS VS
Sbjct: 99 GDFRFSDVS 107


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides burtonii

Query: 1 GADFKFSAVS 10
G DF FS +S
Sbjct: 199 GMDFSFSGLS 208


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain

Query: 2 ADFKFSAV 9
ADF+FS V
Sbjct: 36 ADFEFSPV 43


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 2 ADFKFSAV 9
ADF+FS V
Sbjct: 36 ADFEFSPV 43


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 ADFKFSAV 9
+DFK SAV
Sbjct: 303 SDFKLSAV 310


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GADFKFSAV 9
G DF FS +
Sbjct: 199 GMDFSFSGI 207


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GADFKFSAV 9
G DF FS +
Sbjct: 209 GMDFSFSGI 217




93|SequenceR|470|461|LYSVEGADFK

>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 LYSVEGA 7
LYSVEGA
Sbjct: 52 LYSVEGA 58


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LYSVEGA 7
LYSVEGA
Sbjct: 52 LYSVEGA 58


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LYSVEGA 7
LYSVEGA
Sbjct: 52 LYSVEGA 58


>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain ATCC

Query: 1 LYSVEGADFK 10
LY +E DF+
Sbjct: 234 LYEIEDGDFR 243


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 1 LYSVEGADFK 10
LY +E DF+
Sbjct: 234 LYEIEDGDFR 243


>sp|FLPA_METAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina acetivorans

Query: 1 LYSVEGADFK 10
L SVEGA+++
Sbjct: 37 LISVEGAEYR 46


>sp|KAE1_METTP|TRNA N6-adenosine threonylcarbamoyltransferase|Methanothrix

Query: 2 YSVEGADF 9
Y+V+G DF
Sbjct: 191 YTVKGMDF 198


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 1 LYSVEGA 7
L+SVEGA
Sbjct: 52 LFSVEGA 58


>sp|DPS_HALSA|DNA protection during starvation protein|Halobacterium salinarum

Query: 2 YSVEGADFK 10
++VEGA+F+
Sbjct: 53 WNVEGAEFR 61


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 LYSVEGADF 9
+YS+EG F
Sbjct: 39 IYSIEGKSF 47


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 LYSVEG 6
LYSVEG
Sbjct: 57 LYSVEG 62


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 LYSVEG 6
LYSVEG
Sbjct: 52 LYSVEG 57


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YSVEGA 7
YSVEGA
Sbjct: 293 YSVEGA 298


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LYSVEG 6
LYSVEG
Sbjct: 52 LYSVEG 57


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LYSVEGAD 8
LY+V+G+D
Sbjct: 286 LYAVDGSD 293


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 YSVEGADFK 10
YS G DF+
Sbjct: 105 YSARGVDFE 113


>sp|Y1403_ARCFU|UNCHARACTERIZED protein AF_1403|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YSVEGADFK 10
+ +EG DF+
Sbjct: 51 FEIEGGDFE 59


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LYSVEGADF 9
LY +EG D
Sbjct: 237 LYKIEGEDL 245




94|SequenceR|475|466|SFDRPLYSVE

>sp|VOLA_HALVD|VOLACTIN volcanii (strain ATCC 29605

Query: 1 SFDRPLYSV 9
S DRPLYSV
Sbjct: 305 SIDRPLYSV 313


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SFDRPLYSVE 10
SFD P YSV+
Sbjct: 289 SFDHPFYSVD 298


>sp|HEM3_PYRCJ|PROBABLE porphobilinogen deaminase|Pyrobaculum calidifontis (strain DSM

Query: 3 DRPLYSV 9
DRPLY +
Sbjct: 47 DRPLYQI 53


>sp|RL18_HALSA|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain ATCC

Query: 1 SFDRPLYS 8
S D PLYS
Sbjct: 154 SLDEPLYS 161


>sp|RL18_HALS3|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain ATCC

Query: 1 SFDRPLYS 8
S D PLYS
Sbjct: 154 SLDEPLYS 161


>sp|Y51B_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514.2|Methanocaldococcus jannaschii

Query: 2 FDRPLYS 8
FD+P YS
Sbjct: 116 FDKPKYS 122


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 3 DRPLYSV 9
DRP+Y V
Sbjct: 154 DRPIYGV 160


>sp|FLPA_METVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus voltae

Query: 3 DRPLYSVE 10
D P+Y+VE
Sbjct: 96 DSPVYAVE 103


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 3 DRPLYSV 9
DRP+Y V
Sbjct: 154 DRPIYGV 160


>sp|HEM3_PICTO|PROBABLE porphobilinogen deaminase|Picrophilus torridus (strain ATCC

Query: 1 SFDRPLYSV 9
+ D PLYS+
Sbjct: 43 NLDSPLYSI 51


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 4 RPLYSV 9
RPLYSV
Sbjct: 117 RPLYSV 122


>sp|RL5_META3|LARGE ribosomal subunit protein uL5|Methanococcus aeolicus (strain ATCC

Query: 1 SFDRPLYSVE 10
+F++P YSV+
Sbjct: 137 TFEKPGYSVK 146


>sp|DHOM_SULTO|HOMOSERINE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SFDRPLYSVE 10
S D PLY+V+
Sbjct: 252 SQDDPLYNVD 261


>sp|RL18_HALVD|LARGE ribosomal subunit protein uL18|Haloferax volcanii (strain ATCC

Query: 2 FDRPLYSVE 10
D PLYS E
Sbjct: 155 LDEPLYSGE 163


>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 2 FDRPLYSV 9
FD P+YS+
Sbjct: 531 FDDPVYSM 538


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 4 RPLYSVE 10
RPLYS E
Sbjct: 614 RPLYSFE 620


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 2 FDRPLYSVE 10
FD P +S+E
Sbjct: 224 FDAPEFSIE 232


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FDRPLYSVE 10
FD P +S+E
Sbjct: 223 FDAPEFSIE 231




95|SequenceR|480|471|LPRYTSFDRP

>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPRYTSFDRP 10
+P Y +FD P
Sbjct: 125 IPEYANFDNP 134


>sp|AROE_METST|SHIKIMATE dehydrogenase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 2 PRYTSFDRP 10
P Y SF++P
Sbjct: 268 PSYESFEKP 276


>sp|PRIL_SACS2|DNA primase large subunit PriL|Saccharolobus solfataricus (strain

Query: 1 LPRYTSFDRP 10
LP Y S++ P
Sbjct: 54 LPHYVSYNEP 63


>sp|Y830_PYRAE|PROTEIN PAE0830|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LPRYTSFD 8
+PR+T FD
Sbjct: 83 IPRFTEFD 90


>sp|PIMT2_METAC|PROTEIN-L-ISOASPARTATE O-methyltransferase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PRYTSFDR 9
PRY +DR
Sbjct: 163 PRYAPYDR 170


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPRYTSFDRP 10
LPRY D P
Sbjct: 311 LPRYYVIDDP 320


>sp|NRDR_NATPD|TRANSCRIPTIONAL repressor NrdR|Natronomonas pharaonis (strain ATCC 35678

Query: 3 RYTSFDRP 10
R+T+++RP
Sbjct: 37 RFTTYERP 44


>sp|CDC6K_HALMA|ORC1-TYPE DNA replication protein 11|Haloarcula marismortui (strain ATCC

Query: 2 PRYTSF 7
PRYT+F
Sbjct: 323 PRYTNF 328


>sp|PCNA1_PYRAE|DNA polymerase sliding clamp 1|Pyrobaculum aerophilum (strain ATCC

Query: 2 PRYTSFDRP 10
P Y SFD P
Sbjct: 227 PIYLSFDIP 235


>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium pump|Methanosarcina

Query: 4 YTSFDR 9
YTS+DR
Sbjct: 351 YTSYDR 356


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LPRYTSFDRP 10
LPR + RP
Sbjct: 288 LPRIVGYSRP 297


>sp|Y797_METJA|UNCHARACTERIZED ABC transporter permease MJ0797|Methanocaldococcus jannaschii

Query: 4 YTSFDR 9
YTSFD+
Sbjct: 66 YTSFDK 71


>sp|TRPA_SACS2|TRYPTOPHAN synthase alpha chain|Saccharolobus solfataricus (strain ATCC

Query: 2 PRYTSFDRP 10
P+Y +D P
Sbjct: 42 PKYAKYDGP 50


>sp|PYRB_SACI3|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 1 LPRYTSFDR 9
LPR T DR
Sbjct: 260 LPRVTEIDR 268


>sp|PYRB_SACI7|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 1 LPRYTSFDR 9
LPR T DR
Sbjct: 260 LPRVTEIDR 268


>sp|PYRB_SACI2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 1 LPRYTSFDR 9
LPR T DR
Sbjct: 260 LPRVTEIDR 268


>sp|PYRB_SACI1|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 1 LPRYTSFDR 9
LPR T DR
Sbjct: 260 LPRVTEIDR 268


>sp|TRPA_SULAC|TRYPTOPHAN synthase alpha chain|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PRYTSFDRP 10
P+Y +D P
Sbjct: 41 PKYAKYDGP 49


>sp|PYRB_SACI6|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 1 LPRYTSFDR 9
LPR T DR
Sbjct: 260 LPRVTEIDR 268


>sp|PYRB_SACI4|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 1 LPRYTSFDR 9
LPR T DR
Sbjct: 260 LPRVTEIDR 268


>sp|PYRB_SACS2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus solfataricus

Query: 1 LPRYTSFDR 9
LPR T DR
Sbjct: 260 LPRVTEIDR 268


>sp|TRPA_SULTO|TRYPTOPHAN synthase alpha chain|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PRYTSFDRP 10
P+Y +D P
Sbjct: 40 PKYAKYDGP 48


>sp|NRDR_HALMD|TRANSCRIPTIONAL repressor NrdR|Halomicrobium mukohataei (strain ATCC 700874

Query: 3 RYTSFDRP 10
R+T+++RP
Sbjct: 37 RFTTYERP 44




96|SequenceR|485|476|VSPDPLPRYT

>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 1 VSPDPLPRYT 10
++PDP+ YT
Sbjct: 109 INPDPISTYT 118


>sp|HJE_SULAC|CROSSOVER junction endodeoxyribonuclease Hje|Sulfolobus acidocaldarius

Query: 2 SPDPLP 7
SP+PLP
Sbjct: 33 SPNPLP 38


>sp|MDH_METBF|MALATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 5 PLPRYT 10
PLP+YT
Sbjct: 180 PLPQYT 185


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PDPLPRYT 10
P+PL RYT
Sbjct: 164 PNPLERYT 171


>sp|MDH_METAC|MALATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 PLPRYT 10
PLP+YT
Sbjct: 180 PLPQYT 185


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VSPDPLPRYT 10
+SPD +PR +
Sbjct: 104 ISPDVIPRMS 113


>sp|TRUD_THEVO|PROBABLE tRNA pseudouridine synthase D|Thermoplasma volcanium (strain ATCC

Query: 1 VSPDPLPRYT 10
+ PDP +YT
Sbjct: 28 IEPDPNGKYT 37


>sp|MDH_METMA|MALATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 PLPRYT 10
PLP+YT
Sbjct: 180 PLPQYT 185


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PDPLPRY 9
PDP RY
Sbjct: 68 PDPASRY 74


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 3 PDPLPRY 9
PDP RY
Sbjct: 68 PDPASRY 74


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 1 VSPDPLPRY 9
V PDP RY
Sbjct: 247 VEPDPDARY 255


>sp|HJE_SACI5|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus islandicus

Query: 2 SPDPLP 7
SP+PLP
Sbjct: 33 SPNPLP 38


>sp|AROD_METS5|3-DEHYDROQUINATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VSPDPLPR 8
+SPDPL R
Sbjct: 160 MSPDPLER 167


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 1 VSPDPLPRYT 10
VS DPL YT
Sbjct: 32 VSVDPLAAYT 41


>sp|FAU1_HALSA|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 700922

Query: 1 VSPDPLPR 8
V PDP+PR
Sbjct: 85 VWPDPVPR 92


>sp|FAU1_HALS3|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 29341

Query: 1 VSPDPLPR 8
V PDP+PR
Sbjct: 85 VWPDPVPR 92


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 2 SPDPLP 7
SPDPLP
Sbjct: 296 SPDPLP 301


>sp|RNP1_HALSA|RIBONUCLEASE P protein component 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 VSPDPLPRY 9
++P+ LPR+
Sbjct: 4 ITPESLPRH 12


>sp|RNP1_HALS3|RIBONUCLEASE P protein component 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 VSPDPLPRY 9
++P+ LPR+
Sbjct: 4 ITPESLPRH 12


>sp|HJE_SACS2|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus solfataricus

Query: 2 SPDPLP 7
SP+PLP
Sbjct: 33 SPNPLP 38


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 4 DPLPRYT 10
DPLP YT
Sbjct: 573 DPLPVYT 579


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SPDPLPR 8
SP PLP+
Sbjct: 526 SPPPLPK 532


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 VSPDPLPR 8
+ P+PLPR
Sbjct: 87 IFPNPLPR 94


>sp|RNH2_THEPD|RIBONUCLEASE HII|Thermofilum pendens (strain DSM 2475

Query: 2 SPDPLP 7
SPDP+P
Sbjct: 114 SPDPVP 119


>sp|UVRC_METHJ|UVRABC system protein C|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VSPDPLPR 8
+S DP PR
Sbjct: 102 ISNDPFPR 109


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PDPLPRYT 10
P+P+ +YT
Sbjct: 353 PEPIRKYT 360




97|SequenceR|490|481|YRRSWVSPDP

>sp|RL19E_AERPE|LARGE ribosomal subunit protein eL19|Aeropyrum pernix (strain ATCC

Query: 3 RSWVSPDP 10
R W+SPDP
Sbjct: 20 RIWISPDP 27


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 2 RRSWVSPD 9
R WVSPD
Sbjct: 311 RVKWVSPD 318


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 2 RRSWVSPD 9
R WVSPD
Sbjct: 312 RVKWVSPD 319


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 2 RRSWVSPDP 10
R SW P+P
Sbjct: 520 RESWRPPEP 528


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RRSWVSPDP 10
RR W P P
Sbjct: 526 RRQWTPPPP 534


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RRSWVSPDP 10
R SW P+P
Sbjct: 516 RASWRPPEP 524


>sp|HDRD_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina acetivorans

Query: 2 RRSWVSPD 9
R +WV PD
Sbjct: 149 RLAWVPPD 156


>sp|HDRD_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina thermophila

Query: 2 RRSWVSPD 9
R +WV PD
Sbjct: 149 RLAWVPPD 156


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YRRSWVSPDP 10
Y R+W P P
Sbjct: 293 YFRAWFKPTP 302


>sp|RS19_CALMQ|SMALL ribosomal subunit protein uS19|Caldivirga maquilingensis (strain

Query: 2 RRSWVSPDP 10
RR W+ P P
Sbjct: 41 RRGWIMPTP 49


>sp|HDRD_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina barkeri (strain

Query: 2 RRSWVSPD 9
R +WV PD
Sbjct: 149 RLAWVPPD 156


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YRRSWVSPDP 10
Y R+W P P
Sbjct: 293 YFRAWFKPTP 302


>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 2 RRSWVSPD 9
R +WV PD
Sbjct: 149 RLNWVPPD 156


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 YRRSWVSPD 9
Y W+ PD
Sbjct: 289 YELKWIKPD 297


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RRSWVSPDP 10
R++W P P
Sbjct: 526 RKNWTPPPP 534


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RRSWVSPDP 10
R++W P P
Sbjct: 526 RKNWTPPPP 534


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RRSWVSPDP 10
R++W P P
Sbjct: 526 RKAWAPPPP 534


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 YRRSWVSP 8
+R++WV+P
Sbjct: 388 WRKAWVTP 395


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YRRSWVSPDP 10
Y R W+ P P
Sbjct: 293 YFRVWLKPTP 302


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 SWVSPD 9
+WV+PD
Sbjct: 244 AWVNPD 249


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 YRRSWVSPD 9
+RR W PD
Sbjct: 352 WRRFWEDPD 360


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 RSWVSPD 9
+ W+SPD
Sbjct: 264 KEWISPD 270


>sp|LPLA_AERPE|PUTATIVE lipoate-protein ligase A|Aeropyrum pernix (strain ATCC 700893

Query: 3 RSWVSPD 9
R WV+PD
Sbjct: 33 RLWVNPD 39


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RRSWVSPD 9
RR W SPD
Sbjct: 274 RRYWKSPD 281


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 1 YRRSWVSPDP 10
YRR+ +SP P
Sbjct: 17 YRRASLSPPP 26


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YRRSWVSPDP 10
Y R W P P
Sbjct: 293 YFRVWFKPTP 302


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YRRSWVSPDP 10
Y R W P P
Sbjct: 293 YFRVWFKPTP 302


>sp|FEN_PYRHO|FLAP endonuclease 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YRRSWVSPD 9
Y SW PD
Sbjct: 288 YSLSWKEPD 296




98|SequenceR|495|486|LAMETYRRSW

>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 ETYRRSW 10
ET+RR W
Sbjct: 367 ETFRRYW 373


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 ETYRRSW 10
ET+RR W
Sbjct: 368 ETFRRYW 374


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 ETYRRSW 10
ET+RR W
Sbjct: 367 ETFRRYW 373


>sp|Y664_METJA|UNCHARACTERIZED protein MJ0664|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAMETYRRSW 10
L ETY ++W
Sbjct: 33 LNSETYEQNW 42


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans

Query: 1 LAMETYRRSW 10
+ M+ YR W
Sbjct: 47 IVMKRYREKW 56




99|SequenceR|500|491|LSFFPLAMET

>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 LSFFPLAMET 10
+SFF A+ET
Sbjct: 686 ISFFSSALET 695




100|SequenceR|505|496|VRVEALSFFP

>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RVEALSFFP 10
R+E L +FP
Sbjct: 266 RLEELDYFP 274


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RVEALSFFP 10
R+E L +FP
Sbjct: 266 RLEELEYFP 274


>sp|GSA_CALMQ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 EALSFFP 10
EALS FP
Sbjct: 11 EALSLFP 17


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RVEALSFFP 10
R+E L +FP
Sbjct: 266 RLEELEYFP 274


>sp|COXX_KORCO|PROTOHEME IX farnesyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 RVEALSF 8
RVEALSF
Sbjct: 88 RVEALSF 94




101|SequenceR|510|501|QSQYGVRVEA

>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SQYGVRVE 9
S +GVRVE
Sbjct: 204 SMFGVRVE 211


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 QSQYGVR 7
Q QYG+R
Sbjct: 447 QKQYGIR 453


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 2 SQYGVRV 8
S+YG+RV
Sbjct: 109 SRYGIRV 115


>sp|AROC_METAC|CHORISMATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SQYGVRV 8
S+YGVR+
Sbjct: 146 SRYGVRI 152




102|SequenceR|515|506|FCSINQSQYG

>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CSINQSQYG 10
CS+ +S YG
Sbjct: 189 CSLKESDYG 197


>sp|MDH_PICTO|MALATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 FCSINQSQYG 10
FC+ ++S+Y
Sbjct: 63 FCTADESKYA 72


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FCSINQSQY 9
+C I + QY
Sbjct: 101 YCKIGEDQY 109




103|SequenceR|520|511|DVLRFFCSIN

>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DVLRFFCSIN 10
D+LR++ +IN
Sbjct: 346 DLLRYYLTIN 355


>sp|G3P_SULAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VLRFFCSIN 10
+LR C+IN
Sbjct: 146 ILRVLCTIN 154


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DVLRFFCSIN 10
D+LR++ ++N
Sbjct: 346 DLLRYYLTVN 355


>sp|Y2264_ARCFU|PUTATIVE esterase AF_2264|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VLRFFCS 8
V +FFCS
Sbjct: 5 VTKFFCS 11


>sp|Y1061_METJA|UNCHARACTERIZED membrane protein MJ1061|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DVLRFFCSIN 10
D+ RF SIN
Sbjct: 201 DMTRFIMSIN 210


>sp|Y27B_METJA|UNCHARACTERIZED protein MJ0275.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVLRFFCSIN 10
+V+ FF S+N
Sbjct: 85 EVIEFFVSLN 94




104|SequenceR|525|516|WVSDRDVLRF

>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 WVSDRDVLR 9
W SDR +LR
Sbjct: 359 WGSDRVILR 367


>sp|DCDB_METTH|DCTP deaminase, dUMP-forming|Methanothermobacter thermautotrophicus

Query: 2 VSDRDVLRF 10
+SDRD+ R+
Sbjct: 4 LSDRDIKRY 12


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 1 WVSDRDVLR 9
W SDRD R
Sbjct: 120 WESDRDKER 128


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WVSDRDVLR 9
W SDRD R
Sbjct: 120 WESDRDKER 128


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain ATCC

Query: 1 WVSDRDVLR 9
W SDRD R
Sbjct: 120 WESDRDKER 128


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 SDRDVLRF 10
+DR VLRF
Sbjct: 540 ADRGVLRF 547


>sp|PCNA_PICTO|DNA polymerase sliding clamp|Picrophilus torridus (strain ATCC 700027

Query: 4 DRDVLRF 10
DRD LRF
Sbjct: 92 DRDKLRF 98


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 1 WVSDRD 6
W SDRD
Sbjct: 120 WESDRD 125


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 WVSDRDVL 8
W+ RD+L
Sbjct: 515 WIERRDIL 522


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WVSDRD 6
W+ DRD
Sbjct: 38 WIRDRD 43


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 1 WVSDRDV 7
W++D DV
Sbjct: 189 WITDSDV 195


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WVSDRDVL 8
W++D+D++
Sbjct: 111 WLADKDII 118


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 3 SDRDVLRF 10
++RDV+RF
Sbjct: 311 NERDVMRF 318


>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 WVSDRDVL 8
W+++ DVL
Sbjct: 31 WIAEADVL 38


>sp|PRIS_PYRAB|DNA primase small subunit PriS|Pyrococcus abyssi (strain GE5 /

Query: 3 SDRDVLRF 10
++RDV+RF
Sbjct: 311 NERDVMRF 318


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 DRDVLRF 10
DRD +RF
Sbjct: 400 DRDAMRF 406


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 1 WVSDRDV 7
W+SD D+
Sbjct: 251 WLSDEDI 257


>sp|CBID_ARCFU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WVSDRD 6
W+ DRD
Sbjct: 15 WIKDRD 20


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 DRDVLRF 10
DRD+LR+
Sbjct: 344 DRDLLRY 350


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 1 WVSDRDVL 8
W++D+D++
Sbjct: 111 WLADKDIV 118


>sp|RS2_HYPBU|SMALL ribosomal subunit protein uS2|Hyperthermus butylicus (strain DSM

Query: 1 WVSDRDVLR 9
W+ R++LR
Sbjct: 183 WILTREILR 191


>sp|RS2_AERPE|SMALL ribosomal subunit protein uS2|Aeropyrum pernix (strain ATCC 700893

Query: 1 WVSDRDVLR 9
W+ R++LR
Sbjct: 172 WILTREILR 180




105|SequenceR|530|521|GLDYGWVSDR

>sp|ARGB_METAR|ACETYLGLUTAMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LDYGWVSD 9
+DYGWV D
Sbjct: 153 VDYGWVGD 160


>sp|MER_ARCFU|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLDYGWVSD 9
G DY W++D
Sbjct: 27 GFDYTWITD 35


>sp|MER_METMA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLDYGWVSD 9
G DY W++D
Sbjct: 27 GFDYVWITD 35


>sp|MER_METAC|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GLDYGWVSD 9
G DY W++D
Sbjct: 27 GFDYVWITD 35


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 DYGWVS 8
DYGW+S
Sbjct: 107 DYGWMS 112


>sp|GUAAB_METKA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanopyrus kandleri

Query: 3 DYGWV 7
DYGWV
Sbjct: 254 DYGWV 258


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 1 GLDYGW 6
GLDY W
Sbjct: 237 GLDYAW 242


>sp|TMG10_ARCFU|TRNA (guanine(10)-N2)-dimethyltransferase|Archaeoglobus fulgidus

Query: 4 YGWVSD 9
YGWV D
Sbjct: 26 YGWVED 31


>sp|RL37_METHJ|LARGE ribosomal subunit protein eL37|Methanospirillum hungatei JF-1

Query: 4 YGWVSDR 10
YGW++ R
Sbjct: 48 YGWITKR 54


>sp|MER_METBF|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GLDYGWVSD 9
G D+ W++D
Sbjct: 27 GFDHVWITD 35


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 1 GLDYGWV 7
G DYGW+
Sbjct: 184 GPDYGWL 190


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 5 GWVSDR 10
GW+SD+
Sbjct: 157 GWISDK 162


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 2 LDYGWVSD 9
LDYG V+D
Sbjct: 308 LDYGEVTD 315


>sp|NASB_HALMT|PROBABLE nitrate transporter|Haloferax mediterranei (strain ATCC 33500

Query: 5 GWVSDR 10
GW+SDR
Sbjct: 66 GWLSDR 71


>sp|FLAE_METVO|PUTATIVE flagella-related protein E|Methanococcus voltae

Query: 3 DYGWVSDR 10
+ GWVSD+
Sbjct: 57 NLGWVSDK 64


>sp|GGGPS_THESM|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus sibiricus (strain DSM 12597

Query: 5 GWVSD 9
GWVSD
Sbjct: 142 GWVSD 146


>sp|ARGB_METBU|ACETYLGLUTAMATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LDYGWVSD 9
+D GWV D
Sbjct: 155 VDLGWVGD 162


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 LDYGWV 7
+D+GW+
Sbjct: 747 IDFGWI 752


>sp|MPCT_HALS3|TRANSDUCER protein MpcT|Halobacterium salinarum (strain ATCC 29341

Query: 3 DYGWVSDR 10
D GW DR
Sbjct: 611 DGGWADDR 618


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLDYGWVS 8
G D+ WV+
Sbjct: 257 GTDFAWVA 264


>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DYGWVSD 9
DY W SD
Sbjct: 104 DYVWASD 110


>sp|RL4_ARCFU|LARGE ribosomal subunit protein uL4|Archaeoglobus fulgidus (strain ATCC

Query: 1 GLDYGW 6
G+DY W
Sbjct: 53 GVDYSW 58




106|SequenceR|535|526|ILSRLGLDYG

>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LSRLGLDY 9
LSR+G+DY
Sbjct: 270 LSRIGVDY 277


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILSRLGLDY 9
+LS LG+DY
Sbjct: 371 LLSYLGIDY 379


>sp|HDRB1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina acetivorans

Query: 1 ILSRLGLDY 9
+ RLG+DY
Sbjct: 34 VFDRLGVDY 42


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 2 LSRLGLDY 9
L+ LGLDY
Sbjct: 522 LAELGLDY 529


>sp|HDRB1_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 1 ILSRLGLDY 9
ILS+ GL+Y
Sbjct: 105 ILSKYGLEY 113


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 1 ILSRLGLDYG 10
+ S LG+D+G
Sbjct: 267 VASELGIDFG 276


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ILSRLGLD 8
ILSRLG+D
Sbjct: 98 ILSRLGVD 105


>sp|PIMT_METAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ILSRLGLD 8
+LSRLG D
Sbjct: 93 VLSRLGFD 100


>sp|Y169_METJA|UNCHARACTERIZED ATP-binding protein MJ0169|Methanocaldococcus jannaschii (strain

Query: 1 ILSRLGLDYG 10
+L+R+G D+G
Sbjct: 169 VLNRVGRDFG 178


>sp|SERB_METJA|PHOSPHOSERINE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILSRLGLDYG 10
I +LGLDY
Sbjct: 109 IKEKLGLDYA 118


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 1 ILSRLGLDYG 10
+ S LG+D+G
Sbjct: 267 VASELGVDFG 276


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 1 ILSRLGLDYG 10
+ S LG+D+G
Sbjct: 267 VASELGVDFG 276


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 4 RLGLDYG 10
+LGL+YG
Sbjct: 282 KLGLNYG 288


>sp|MTM5_METJA|TYPE II methyltransferase M.MjaV|Methanocaldococcus jannaschii (strain

Query: 4 RLGLDY 9
RLG+DY
Sbjct: 244 RLGIDY 249


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 2 LSRLGLDY 9
L+ LG+DY
Sbjct: 522 LAELGMDY 529


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LSRLGLDY 9
L+ LG+DY
Sbjct: 522 LAELGMDY 529


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LSRLGLDY 9
L+ LG+DY
Sbjct: 522 LAELGMDY 529


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 2 LSRLGLDY 9
L+ LG+DY
Sbjct: 522 LAELGMDY 529


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LSRLGLDY 9
L+ LG+DY
Sbjct: 522 LAELGMDY 529


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LSRLGLDY 9
L+ LG+DY
Sbjct: 522 LAELGMDY 529


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 2 LSRLGLDY 9
L+ LG+DY
Sbjct: 522 LAELGMDY 529


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILSRLGLDY 9
+LS+LG+ Y
Sbjct: 534 VLSKLGVKY 542


>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain ATCC

Query: 5 LGLDYG 10
LG+DYG
Sbjct: 284 LGIDYG 289


>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 5 LGLDYG 10
LG+DYG
Sbjct: 334 LGIDYG 339


>sp|GUAA_AERPE|GMP synthase [glutamine-hydrolyzing]|Aeropyrum pernix (strain ATCC

Query: 1 ILSRLGLD 8
+LSRLGL+
Sbjct: 267 LLSRLGLE 274


>sp|AROK_METTP|SHIKIMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ILSRLGLDYG 10
+LS LDYG
Sbjct: 62 VLSHFDLDYG 71


>sp|DCUP_PICTO|UROPORPHYRINOGEN decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 2 LSRLGLDY 9
LSRL +DY
Sbjct: 242 LSRLNVDY 249


>sp|HIS4_METST|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosphaera stadtmanae (strain

Query: 1 ILSRLGLDY 9
+LS +G+DY
Sbjct: 207 VLSDIGVDY 215


>sp|RL24_METS3|LARGE ribosomal subunit protein uL24|Methanobrevibacter smithii (strain

Query: 5 LGLDYG 10
LG+DYG
Sbjct: 64 LGVDYG 69


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 ILSRLGL 7
ILSRLGL
Sbjct: 277 ILSRLGL 283


>sp|PURA_THESM|ADENYLOSUCCINATE synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 1 ILSRLGLDY 9
+ R+GLDY
Sbjct: 93 VRGRIGLDY 101


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 RLGLDYG 10
+LG DYG
Sbjct: 79 KLGTDYG 85


>sp|TRUD_THESM|PROBABLE tRNA pseudouridine synthase D|Thermococcus sibiricus (strain DSM

Query: 1 ILSRLGLDY 9
I R+G+DY
Sbjct: 65 IAKRIGIDY 73


>sp|CBIT_PYRCJ|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 LSRLGLDY 9
L LGLDY
Sbjct: 156 LGELGLDY 163


>sp|Y326_METJA|PUTATIVE permease MJ0326|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILSRLGLDYG 10
ILS G+D+G
Sbjct: 43 ILSTAGMDFG 52




107|SequenceR|540|531|TLVAPILSRL

>sp|Y3533_METJA|UNCHARACTERIZED protein MJECL33|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LVAPILSRL 10
L++PI SRL
Sbjct: 120 LISPIKSRL 128




108|SequenceR|545|536|GLMSVTLVAP

>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GLMSVTLVAP 10
GLM TLV+P
Sbjct: 402 GLMLKTLVSP 411


>sp|KPRS_METJA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GLMSVTLVAP 10
G+ +TLVAP
Sbjct: 77 GVKKITLVAP 86


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 GLMSVTLVAP 10
G +S+T+ AP
Sbjct: 7482 GSLSITVAAP 7491




109|SequenceR|550|541|LIFPYGLMSV

>sp|SYFB_SULAC|PHENYLALANINE--TRNA ligase beta subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LIFPYGLM 8
L FPYG++
Sbjct: 52 LFFPYGII 59


>sp|RS4E_SULTO|SMALL ribosomal subunit protein eS4|Sulfurisphaera tokodaii (strain DSM

Query: 3 FPYGLMSV 10
FP GLM V
Sbjct: 77 FPVGLMDV 84


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LIFPYGLM 8
+I PYG++
Sbjct: 893 IILPYGIL 900


>sp|HIS6_METB6|IMIDAZOLE glycerol phosphate synthase subunit|Methanoregula boonei (strain

Query: 2 IFPYGLMSV 10
+F YG MSV
Sbjct: 244 VFHYGEMSV 252


>sp|RS4E_PYRNV|SMALL ribosomal subunit protein eS4|Pyrobaculum neutrophilum (strain

Query: 3 FPYGLMSV 10
FP GLM V
Sbjct: 78 FPVGLMDV 85


>sp|RS4E_PYRIL|SMALL ribosomal subunit protein eS4|Pyrobaculum islandicum (strain DSM

Query: 3 FPYGLMSV 10
FP GLM V
Sbjct: 78 FPVGLMDV 85


>sp|RS4E_PYRAE|SMALL ribosomal subunit protein eS4|Pyrobaculum aerophilum (strain ATCC

Query: 3 FPYGLMSV 10
FP GLM V
Sbjct: 78 FPVGLMDV 85


>sp|RS4E_PYRCJ|SMALL ribosomal subunit protein eS4|Pyrobaculum calidifontis (strain

Query: 3 FPYGLMSV 10
FP GLM V
Sbjct: 78 FPIGLMDV 85


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 3 FPYGLMSV 10
FP GLM V
Sbjct: 78 FPVGLMDV 85


>sp|FDHC_METFO|PROBABLE formate transporter|Methanobacterium formicicum

Query: 2 IFPYGLMSV 10
+FP GLM V
Sbjct: 72 VFPVGLMLV 80


>sp|FDHC_METTF|PROBABLE formate transporter|Methanothermobacter thermautotrophicus

Query: 2 IFPYGLMSV 10
+FP GLM V
Sbjct: 72 VFPVGLMLV 80


>sp|Y317_METJA|UNCHARACTERIZED protein MJ0317|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIFPYGLMS 9
++PYG++S
Sbjct: 196 FVYPYGVVS 204




110|SequenceR|555|546|GVMDPLIFPY

>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GVMDPLIFPY 10
G PLIFPY
Sbjct: 223 GAGHPLIFPY 232


>sp|MFNB_META3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GVMDPLIFP 9
G +DPLI P
Sbjct: 129 GAVDPLIIP 137


>sp|MFNB_METVS|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GVMDPLIFP 9
G +DPLI P
Sbjct: 129 GAVDPLIIP 137


>sp|GUAAB_METMJ|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoculleus

Query: 4 DPLIFPY 10
DPL+ PY
Sbjct: 264 DPLLLPY 270


>sp|MFNB_METM7|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 1 GVMDPLIFP 9
G +DPLI P
Sbjct: 129 GGVDPLIIP 137


>sp|PRIL_METBF|DNA primase large subunit PriL|Methanosarcina barkeri (strain Fusaro /

Query: 1 GVMDPLIFP 9
GV++P +FP
Sbjct: 220 GVVEPDLFP 228


>sp|Y1413_SULTO|PROTEIN STK_14130|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVMDPLIFPY 10
GVM+ I PY
Sbjct: 189 GVMESTIAPY 198


>sp|Y1508_SULAC|PROTEIN Saci_1508|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVMDPLIFPY 10
GVM+ I PY
Sbjct: 189 GVMESTIAPY 198


>sp|DAPAL_PYRHO|UNCHARACTERIZED DapA-like lyase PH0847|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GVMDPLIFPY 10
GV+ PLI P+
Sbjct: 3 GVIVPLITPF 12


>sp|PUR7_PYRAE|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 DPLIFP 9
DPL++P
Sbjct: 124 DPLVYP 129


>sp|DAPAL_PYRFU|UNCHARACTERIZED DapA-like lyase PF0657|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVMDPLIFPY 10
GV+ PL+ P+
Sbjct: 3 GVIVPLVTPF 12


>sp|YNI3_METTL|UNCHARACTERIZED protein in nifH1 5'region|Methanothermococcus

Query: 1 GVMDPLIFPY 10
+ PLI+PY
Sbjct: 53 NTIKPLIYPY 62


>sp|SYP_CALMQ|PROLINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VMDPLIFPY 10
+MD L PY
Sbjct: 188 IMDELCIPY 196


>sp|DAPAL_PYRAB|UNCHARACTERIZED DapA-like lyase PYRAB12600|Pyrococcus abyssi (strain GE5 /

Query: 1 GVMDPLIFPY 10
GV+ PL+ P+
Sbjct: 3 GVIVPLVTPF 12


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 VMDPLIFP 9
V DPL FP
Sbjct: 199 VKDPLSFP 206


>sp|DAPAL_THEPD|UNCHARACTERIZED DapA-like lyase Tpen_1666|Thermofilum pendens (strain DSM 2475

Query: 1 GVMDPLIFPY 10
GV+ P I P+
Sbjct: 7 GVISPFITPF 16


>sp|DAPAL_THEON|UNCHARACTERIZED DapA-like lyase TON_0506|Thermococcus onnurineus (strain NA1)

Query: 1 GVMDPLIFPY 10
GV+ PL+ P+
Sbjct: 3 GVIVPLVTPF 12


>sp|CDPAS_PYRFU|CDP-ARCHAEOL synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVMDPLIFPY 10
GV+ +I+PY
Sbjct: 63 GVIQQIIYPY 72


>sp|TYW1_PYRAB|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 DPLIFPY 10
+P+++PY
Sbjct: 152 EPMLYPY 158


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain ATCC

Query: 4 DPLIFPY 10
+P+++PY
Sbjct: 152 EPMLYPY 158




111|SequenceR|560|551|PVANGGVMDP

>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain

Query: 5 GGVMDP 10
GGVMDP
Sbjct: 42 GGVMDP 47


>sp|PUR7_METS3|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PVANGGVMDP 10
P+A+G +DP
Sbjct: 106 PIADGTKLDP 115


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PVANGGVMDP 10
P A GV DP
Sbjct: 666 PAAKDGVWDP 675


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 PVANGGVMD 9
PV GG MD
Sbjct: 1061 PVTRGGSMD 1069


>sp|PYRI_METVS|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus vannielii

Query: 1 PVANGGVMD 9
P+ NG V+D
Sbjct: 9 PIENGTVID 17


>sp|PYRI_METMP|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 1 PVANGGVMD 9
P+ NG V+D
Sbjct: 9 PIENGTVID 17


>sp|PYRI_METM7|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 1 PVANGGVMD 9
P+ NG V+D
Sbjct: 9 PIENGTVID 17


>sp|PYRI_METM6|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 1 PVANGGVMD 9
P+ NG V+D
Sbjct: 9 PIENGTVID 17


>sp|PYRI_METM5|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 1 PVANGGVMD 9
P+ NG V+D
Sbjct: 9 PIENGTVID 17


>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 NGGVMDP 10
NGGV+ P
Sbjct: 133 NGGVLQP 139


>sp|TRUB_HALMA|PROBABLE tRNA pseudouridine synthase B|Haloarcula marismortui (strain ATCC

Query: 2 VANGGVMDP 10
VA+GG +DP
Sbjct: 65 VAHGGTLDP 73


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PVANGGV 7
P+A GGV
Sbjct: 38 PIAKGGV 44


>sp|PYRI_METBU|ASPARTATE carbamoyltransferase regulatory chain|Methanococcoides burtonii

Query: 1 PVANGGVMD 9
P+ NG V+D
Sbjct: 15 PIENGTVID 23


>sp|PYRI_META3|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus aeolicus

Query: 1 PVANGGVMD 9
P+ NG V+D
Sbjct: 16 PIENGTVID 24


>sp|PYRI_METTH|ASPARTATE carbamoyltransferase regulatory chain|Methanothermobacter

Query: 1 PVANGGVMD 9
P+ NG V+D
Sbjct: 13 PIKNGTVID 21


>sp|PYRI_METPE|ASPARTATE carbamoyltransferase regulatory chain|Methanosphaerula palustris

Query: 1 PVANGGVMD 9
P+ NG V+D
Sbjct: 14 PIRNGTVID 22


>sp|PYRI_METMJ|ASPARTATE carbamoyltransferase regulatory chain|Methanoculleus marisnigri

Query: 1 PVANGGVMD 9
P+ NG V+D
Sbjct: 14 PIKNGTVID 22


>sp|RL2_SACI1|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 1 PVANGGVMD 9
P+ANG V++
Sbjct: 86 PIANGNVIE 94


>sp|RL2_SACI7|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 1 PVANGGVMD 9
P+ANG V++
Sbjct: 86 PIANGNVIE 94


>sp|RL2_SACI6|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 1 PVANGGVMD 9
P+ANG V++
Sbjct: 86 PIANGNVIE 94


>sp|RL2_SACI4|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 1 PVANGGVMD 9
P+ANG V++
Sbjct: 86 PIANGNVIE 94


>sp|RL2_SACI3|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 1 PVANGGVMD 9
P+ANG V++
Sbjct: 86 PIANGNVIE 94


>sp|RL2_SACI2|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 1 PVANGGVMD 9
P+ANG V++
Sbjct: 86 PIANGNVIE 94


>sp|PYRI_METAR|ASPARTATE carbamoyltransferase regulatory chain|Methanocella arvoryzae

Query: 1 PVANGGVMD 9
P+ NG V+D
Sbjct: 11 PIVNGTVID 19


>sp|RL2_SACS2|LARGE ribosomal subunit protein uL2|Saccharolobus solfataricus (strain

Query: 1 PVANGGVMD 9
P+ANG V++
Sbjct: 86 PIANGNVIE 94


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 2 VANGGVMDP 10
V +GG +DP
Sbjct: 65 VGHGGTLDP 73




112|SequenceR|565|556|GATRQPVANG

>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 TRQPVAN 9
TR+PVAN
Sbjct: 574 TREPVAN 580


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 TRQPVAN 9
TR+PVAN
Sbjct: 574 TREPVAN 580


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TRQPVAN 9
TR+PVAN
Sbjct: 574 TREPVAN 580


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 3 TRQPVAN 9
TR+PVAN
Sbjct: 574 TREPVAN 580


>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 1 GATRQPVANG 10
GA+R PV +G
Sbjct: 54 GASRIPVGDG 63




113|SequenceR|570|561|EPVDGGATRQ

>sp|AATB_IGNH4|A-TYPE ATP synthase subunit B|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EPVDGGA 7
EP+DGGA
Sbjct: 101 EPIDGGA 107


>sp|Y1395_METJA|UNCHARACTERIZED protein MJ1395|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPVDGG 6
EP+DGG
Sbjct: 20 EPIDGG 25


>sp|CDPAS_METBF|CDP-ARCHAEOL synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EPVDGGAT 8
+P+DGG T
Sbjct: 18 KPIDGGRT 25


>sp|CDPAS_METAC|CDP-ARCHAEOL synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EPVDGGAT 8
+P+DGG T
Sbjct: 18 KPIDGGRT 25


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EPVDGGAT 8
EPV GGA+
Sbjct: 25 EPVSGGAS 32


>sp|CDPAS_METMA|CDP-ARCHAEOL synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EPVDGGAT 8
+P+DGG T
Sbjct: 18 KPIDGGRT 25


>sp|THIM_PYRFU|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EPVDGGATR 9
+PV GATR
Sbjct: 92 DPVGAGATR 100


>sp|THIM_CALMQ|HYDROXYETHYLTHIAZOLE kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 EPVDGGATR 9
+PV GATR
Sbjct: 95 DPVGAGATR 103


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 EPVDGG 6
EP+DGG
Sbjct: 102 EPIDGG 107


>sp|AATB_AERPE|A-TYPE ATP synthase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 1 EPVDGG 6
EP+DGG
Sbjct: 98 EPIDGG 103


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EPVDGG 6
EP+DGG
Sbjct: 93 EPIDGG 98


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EPVDGGAT 8
+PVDG AT
Sbjct: 104 DPVDGAAT 111


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EPVDGG 6
EP+DGG
Sbjct: 96 EPIDGG 101


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EPVDGG 6
EP+DGG
Sbjct: 94 EPIDGG 99


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EPVDGG 6
EP+DGG
Sbjct: 96 EPIDGG 101


>sp|THIM_METAR|HYDROXYETHYLTHIAZOLE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EPVDGGATR 9
+PV GATR
Sbjct: 94 DPVGAGATR 102


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EPVDGG 6
EP+DGG
Sbjct: 163 EPLDGG 168


>sp|THIM_METB6|HYDROXYETHYLTHIAZOLE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 EPVDGGATR 9
+PV GATR
Sbjct: 94 DPVGAGATR 102


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 1 EPVDGG 6
EP+DGG
Sbjct: 93 EPLDGG 98


>sp|TRPC_METJA|INDOLE-3-GLYCEROL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EPVDGGAT 8
E V+GGAT
Sbjct: 88 EMVEGGAT 95


>sp|GLPK_PYRFU|GLYCEROL kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VDGGAT 8
VDGGAT
Sbjct: 397 VDGGAT 402


>sp|GLPK_THEKO|GLYCEROL kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VDGGAT 8
VDGGAT
Sbjct: 399 VDGGAT 404


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 1 EPVDGG 6
EP+DGG
Sbjct: 94 EPLDGG 99


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 1 EPVDGG 6
EP+DGG
Sbjct: 94 EPLDGG 99


>sp|GLPK_PYRAB|GLYCEROL kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 VDGGAT 8
VDGGAT
Sbjct: 397 VDGGAT 402


>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 3 VDGGAT 8
VDGGAT
Sbjct: 399 VDGGAT 404


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 1 EPVDGG 6
EP+DGG
Sbjct: 94 EPLDGG 99


>sp|SYY_HALLT|TYROSINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EPVDGGATRQ 10
EP D G +R+
Sbjct: 246 EPTDDGQSRE 255


>sp|GLPK_THEGJ|GLYCEROL kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 VDGGAT 8
VDGGAT
Sbjct: 399 VDGGAT 404


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EPVDGG 6
EPV+GG
Sbjct: 231 EPVEGG 236




114|SequenceR|575|566|IYLEREPVDG

>sp|KTHY_THEAC|PROBABLE thymidylate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IYLEREPVDG 10
+Y+ +EP DG
Sbjct: 31 VYMTKEPTDG 40


>sp|PSB2_PYRCJ|PROTEASOME subunit beta 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LEREPVDG 10
LER+PV G
Sbjct: 172 LERDPVSG 179


>sp|KTHY_PICTO|PROBABLE thymidylate kinase|Picrophilus torridus (strain ATCC 700027

Query: 2 YLEREPVD 9
YL REP D
Sbjct: 33 YLTREPTD 40


>sp|CPGS_THEKO|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus kodakarensis (strain

Query: 1 IYLEREPVD 9
IYL+ EPV+
Sbjct: 402 IYLDNEPVN 410


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 IYLEREPVD 9
IYL+ EPV+
Sbjct: 402 IYLDNEPVN 410


>sp|MFNA_THEKO|L-ASPARTATE decarboxylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IYLEREPV 8
IYL REPV
Sbjct: 318 IYLIREPV 325


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 1 IYLEREPVD 9
IYL+ EPV+
Sbjct: 403 IYLDNEPVN 411


>sp|Y2328_HALVD|UNCHARACTERIZED isochorismatase family protein HVO_2328|Haloferax volcanii

Query: 4 EREPVDG 10
E EPVDG
Sbjct: 78 EAEPVDG 84


>sp|MFNA_THEGJ|PROBABLE L-aspartate decarboxylase|Thermococcus gammatolerans (strain DSM

Query: 1 IYLEREPV 8
+YL REPV
Sbjct: 318 VYLIREPV 325


>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 2 YLEREPVDG 10
Y+E +P DG
Sbjct: 387 YVETQPTDG 395


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 IYLEREPVD 9
+YL+ PVD
Sbjct: 386 VYLKENPVD 394


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 IYLEREPVD 9
+YL+ PVD
Sbjct: 386 VYLKENPVD 394


>sp|PSB2_PYRAR|PROTEASOME subunit beta 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 LEREPVDG 10
+ER+PV G
Sbjct: 172 IERDPVSG 179


>sp|PSB1_PYRIL|PROTEASOME subunit beta 1|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LEREPVDG 10
+ER+PV G
Sbjct: 172 IERDPVSG 179


>sp|CPGS_THESM|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus sibiricus (strain

Query: 1 IYLEREPVD 9
IY++ EPV+
Sbjct: 404 IYIDNEPVN 412


>sp|PSB2_PYRAE|PROTEASOME subunit beta 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LEREPVDG 10
+ER+PV G
Sbjct: 172 IERDPVSG 179


>sp|PSB2_PYRNV|PROTEASOME subunit beta 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 LEREPVDG 10
+ER+PV G
Sbjct: 172 IERDPVSG 179


>sp|HJC_SULTO|CROSSOVER junction endodeoxyribonuclease Hjc|Sulfurisphaera tokodaii

Query: 1 IYLEREPVDG 10
IY+E+E +G
Sbjct: 65 IYIEKEQAEG 74


>sp|PYRI_METKA|ASPARTATE carbamoyltransferase regulatory chain|Methanopyrus kandleri (strain

Query: 4 EREPVD 9
EREPVD
Sbjct: 117 EREPVD 122


>sp|DPCKG_METST|GTP-DEPENDENT dephospho-CoA kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LEREPVD 9
+EREPV+
Sbjct: 67 IEREPVE 73


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 YLEREPVD 9
Y+E EP+D
Sbjct: 490 YIELEPMD 497


>sp|ASD_METKA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanopyrus kandleri

Query: 1 IYLEREPVDG 10
+++ R P+DG
Sbjct: 98 VHVNRAPLDG 107


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 2 YLEREPVD 9
YLE+ PV+
Sbjct: 142 YLEKNPVE 149


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 YLEREPVD 9
Y+E EP+D
Sbjct: 490 YVELEPLD 497


>sp|RPO7_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo7|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IYLEREPVDG 10
+Y+ PVDG
Sbjct: 97 VYVNMGPVDG 106




115|SequenceR|580|571|VELWRIYLER

>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VELWRIYLE 9
+E+W++YLE
Sbjct: 80 IEVWKLYLE 88


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 1 VELWRIYLE 9
+E+W++YLE
Sbjct: 80 IEVWKLYLE 88


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 VELWRIYLE 9
+E+W++YLE
Sbjct: 80 IEVWKLYLE 88


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 VELWRIYLE 9
+E+WR+Y E
Sbjct: 80 IEVWRLYFE 88


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 4 WRIYLER 10
WRIY+E+
Sbjct: 507 WRIYMEK 513


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 WRIYLE 9
WR+YLE
Sbjct: 488 WRMYLE 493


>sp|SECY_METVA|PROTEIN translocase subunit SecY|Methanococcus vannielii

Query: 1 VELWRIYLER 10
++LW ++L+R
Sbjct: 270 IQLWGMFLDR 279


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 ELWRIYLER 10
ELWR Y R
Sbjct: 679 ELWRTYAPR 687


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 ELWRIY 7
ELW++Y
Sbjct: 255 ELWKLY 260


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 1 VELWRIYLE 9
+E+W++Y E
Sbjct: 80 IEVWKLYFE 88


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 2 ELWRIYL 8
+LWR+YL
Sbjct: 517 DLWRLYL 523


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 LWRIYLER 10
W Y+ER
Sbjct: 67 FWEFYIER 74


>sp|P538_METTH|PROTEIN MTH_538|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VELWRIYLER 10
VE +R++LER
Sbjct: 14 VEDYRVFLER 23


>sp|GALE_METJA|PUTATIVE UDP-glucose 4-epimerase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ELWRIYLE 9
E++RIYL+
Sbjct: 266 EVYRIYLD 273


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 ELWRIYLER 10
E+W+I +ER
Sbjct: 117 EIWKIKVER 125


>sp|G1PDH_HYPBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Hyperthermus butylicus (strain DSM 5456

Query: 3 LWRIYLER 10
+WR+Y ER
Sbjct: 43 VWRLYGER 50


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VELWRIYLER 10
+ + RI+LER
Sbjct: 592 INIMRIFLER 601


>sp|RIFK_CALMQ|RIBOFLAVIN kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 WRIYLER 10
+R+YLER
Sbjct: 152 YRLYLER 158


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 1 VELWRIYLE 9
+ +W++YLE
Sbjct: 80 ITVWKLYLE 88


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VELWRIYLE 9
+ +W++YLE
Sbjct: 80 ITVWKLYLE 88


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VELWRIYL 8
VE+W++Y
Sbjct: 80 VEVWKLYF 87


>sp|QUEE_HYPBU|7-CARBOXY-7-DEAZAGUANINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 2 ELWRIY 7
+LWR+Y
Sbjct: 126 QLWRVY 131


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 1 VELWRIYL 8
VE+W++Y
Sbjct: 80 VEVWKLYF 87




116|SequenceR|585|576|PMFAAVELWR

>sp|UPPS_SACS2|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Saccharolobus

Query: 1 PMFAAVELWR 10
P F ++LWR
Sbjct: 239 PEFRKIDLWR 248


>sp|PDAD_META3|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 FAAVELW 9
FAAV LW
Sbjct: 157 FAAVALW 163


>sp|Y357_METJA|UNCHARACTERIZED protein MJ0357|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PMFAAVELW 9
P++ +VE+W
Sbjct: 71 PVYLSVEVW 79


>sp|KDPA_METB6|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Methanoregula boonei (strain DSM

Query: 1 PMFAAVELW 9
P+F VE W
Sbjct: 40 PLFVPVEAW 48


>sp|SECY_METJA|PROTEIN translocase subunit SecY|Methanocaldococcus jannaschii (strain ATCC

Query: 2 MFAAVELW 9
+FA ++LW
Sbjct: 265 LFANIQLW 272


>sp|SECY_METVA|PROTEIN translocase subunit SecY|Methanococcus vannielii

Query: 2 MFAAVELW 9
+FA ++LW
Sbjct: 266 LFANIQLW 273




117|SequenceR|590|581|SFQMAPMFAA

>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SFQMAP 6
SFQMAP
Sbjct: 89 SFQMAP 94


>sp|MTRE_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina barkeri (strain

Query: 2 FQMAPMFA 9
F M+P+FA
Sbjct: 82 FTMSPLFA 89


>sp|ADH_THEBA|ALCOHOL dehydrogenase|Thermococcus barophilus

Query: 1 SFQMAPMFA 9
SF++AP FA
Sbjct: 166 SFEIAPEFA 174




118|SequenceR|595|586|RWPPISFQMA

>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WPPISFQMA 10
WPP++F+M+
Sbjct: 83 WPPVTFKMS 91


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 3 PPISFQM 9
PPISF M
Sbjct: 318 PPISFSM 324


>sp|Y500_PYRAB|UPF0173 metal-dependent hydrolase PYRAB05000|Pyrococcus abyssi (strain GE5

Query: 2 WPPIS 6
WPPIS
Sbjct: 194 WPPIS 198


>sp|Y1671_PYRHO|UPF0173 metal-dependent hydrolase PH1671|Pyrococcus horikoshii (strain ATCC

Query: 2 WPPIS 6
WPPIS
Sbjct: 194 WPPIS 198


>sp|Y1764_PYRFU|UPF0173 metal-dependent hydrolase PF1764|Pyrococcus furiosus (strain ATCC

Query: 2 WPPIS 6
WPPI+
Sbjct: 194 WPPIA 198


>sp|Y1314_THEON|UPF0173 metal-dependent hydrolase TON_1314|Thermococcus onnurineus (strain

Query: 2 WPPIS 6
WPPI+
Sbjct: 193 WPPIA 197


>sp|Y141_THEKO|UPF0173 metal-dependent hydrolase TK0141|Thermococcus kodakarensis (strain

Query: 2 WPPIS 6
WPPI+
Sbjct: 193 WPPIA 197




119|SequenceR|600|591|VEADYRWPPI

>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 VEADYRWPP 9
+E DYR PP
Sbjct: 365 LEGDYRSPP 373


>sp|HIS3_IGNH4|PHOSPHORIBOSYL-AMP cyclohydrolase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 DYRWP 8
+YRWP
Sbjct: 17 NYRWP 21


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 5 YRWP 8
YRWP
Sbjct: 76 YRWP 79


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 5 YRWP 8
YRWP
Sbjct: 76 YRWP 79


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 5 YRWP 8
YRWP
Sbjct: 76 YRWP 79


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 5 YRWP 8
YRWP
Sbjct: 76 YRWP 79


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 5 YRWP 8
YRWP
Sbjct: 76 YRWP 79


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 5 YRWP 8
YRWP
Sbjct: 76 YRWP 79


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 5 YRWP 8
YRWP
Sbjct: 76 YRWP 79


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 DYRWP 8
DY WP
Sbjct: 386 DYAWP 390


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 4 DYRWP 8
D+RWP
Sbjct: 524 DFRWP 528


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 VEADYRWPPI 10
++ DY W P+
Sbjct: 634 LDMDYEWEPV 643




120|SequenceR|605|596|QAIAVVEADY

>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 QAIAVVEADY 10
+AIA++ ADY
Sbjct: 359 EAIALLPADY 368


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 QAIAVVEADY 10
QA++V+ ADY
Sbjct: 149 QALSVLVADY 158


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 QAIAVVEADY 10
QA+AV+ DY
Sbjct: 155 QALAVLVGDY 164


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 QAIAVVEADY 10
QA+AV+ DY
Sbjct: 155 QALAVLVGDY 164


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 QAIAVVEADY 10
QA+AV+ DY
Sbjct: 155 QALAVLVGDY 164


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 3 IAVVEAD 9
IAVVEAD
Sbjct: 177 IAVVEAD 183


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 QAIAVVEADY 10
QA+AV+ DY
Sbjct: 155 QALAVLVGDY 164


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 QAIAVVEADY 10
QA+AV+ DY
Sbjct: 155 QALAVLVGDY 164


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QAIAVVEADY 10
QA++V+ ADY
Sbjct: 151 QALSVLVADY 160


>sp|PSB2_IGNH4|PROTEASOME subunit beta 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 QAIAVVEADY 10
A+ V+EA+Y
Sbjct: 146 MAVGVIEAEY 155


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 QAIAVVEADY 10
QA++V+ ADY
Sbjct: 153 QALSVLVADY 162




121|SequenceR|610|601|LAAFKQAIAV

>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LAAFKQAIA 9
LAAF++A+A
Sbjct: 409 LAAFEKAVA 417




122|SequenceR|615|606|VLSARLAAFK

>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LSARLAAF 9
LSARLA F
Sbjct: 354 LSARLAEF 361


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 2 LSARLAAF 9
LSARLA F
Sbjct: 354 LSARLAEF 361


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 2 LSARLAAF 9
LSARLA F
Sbjct: 354 LSARLAEF 361


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 2 LSARLAAF 9
LSARLA F
Sbjct: 354 LSARLAEF 361


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LSARLAAF 9
L+AR+AAF
Sbjct: 22 LTARIAAF 29




123|SequenceR|620|611|LLLPAVLSAR

>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 LLLPAVLSA 9
+LLPA+L+A
Sbjct: 625 VLLPAILAA 633


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 LLLPAVLSA 9
+LLPA+L+A
Sbjct: 625 VLLPAILAA 633


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLLPAVLSAR 10
++L A+LSAR
Sbjct: 820 MVLEAILSAR 829


>sp|Y1110_METTH|UNCHARACTERIZED protein MTH_1110|Methanothermobacter thermautotrophicus (strain

Query: 1 LLLPAVLS 8
L++PAVLS
Sbjct: 14 LMIPAVLS 21




124|SequenceR|625|616|EGALELLLPA

>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 1 EGALELLLPA 10
EG +EL +PA
Sbjct: 5 EGVVELTVPA 14


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 1 EGALELLLP 9
EG EL+LP
Sbjct: 111 EGTPELILP 119


>sp|TRM1_THEAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma acidophilum

Query: 1 EGALELLLP 9
EG+ E+L+P
Sbjct: 5 EGSAEILVP 13


>sp|RL31_THEVO|LARGE ribosomal subunit protein eL31|Thermoplasma volcanium (strain

Query: 1 EGALELLLP 9
EG E++LP
Sbjct: 81 EGTTEIILP 89




125|SequenceR|630|621|GTDTVEGALE

>sp|RIBA_PICTO|GTP cyclohydrolase-2|Picrophilus torridus (strain ATCC 700027

Query: 1 GTDTVEGALE 10
G DTVE LE
Sbjct: 109 GLDTVEANLE 118


>sp|HTR1_HALMA|SENSORY rhodopsin I transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 GTDTVEGAL 9
GT+TVE AL
Sbjct: 405 GTETVESAL 413


>sp|EF1B_NATPD|ELONGATION factor 1-beta|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GTDTVEGAL 9
GTDTVE A
Sbjct: 63 GTDTVEDAF 71


>sp|Y3226_SACS2|UNCHARACTERIZED aldolase SSO3226|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GTDTVEG 7
G DTVEG
Sbjct: 122 GNDTVEG 128


>sp|KPRS_HALSA|RIBOSE-PHOSPHATE pyrophosphokinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTDTVEGAL 9
GTDT+E A+
Sbjct: 260 GTDTIECAV 268


>sp|KPRS_HALS3|RIBOSE-PHOSPHATE pyrophosphokinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GTDTVEGAL 9
GTDT+E A+
Sbjct: 260 GTDTIECAV 268




126|SequenceR|635|626|RVIPDGTDTV

>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 1 RVIPDGTDTV 10
R+IP+GTD +
Sbjct: 277 RMIPEGTDAL 286


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 1 RVIPDGTDTV 10
R+IP+G+D +
Sbjct: 276 RMIPEGSDAI 285


>sp|PYRH_HALSA|URIDYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VIPDGTDT 9
VIPDGTD
Sbjct: 224 VIPDGTDN 231


>sp|PYRH_HALS3|URIDYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 VIPDGTDT 9
VIPDGTD
Sbjct: 224 VIPDGTDN 231


>sp|EF1B_NITMS|ELONGATION factor 1-beta|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RVIPDGTD 8
+++P+GTD
Sbjct: 9 KILPEGTD 16


>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 RVIPDGTDTV 10
R +PDG+D V
Sbjct: 46 RELPDGSDDV 55


>sp|EF1B_METBU|ELONGATION factor 1-beta|Methanococcoides burtonii (strain DSM 6242

Query: 1 RVIPDGTDT 9
+++P+G DT
Sbjct: 9 KIMPEGVDT 17


>sp|HEM3_HALSA|PROBABLE porphobilinogen deaminase|Halobacterium salinarum (strain ATCC

Query: 2 VIPDGTD 8
V PDGTD
Sbjct: 107 VTPDGTD 113


>sp|IF2A_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain ATCC

Query: 3 IPDGTDTV 10
+PDG D +
Sbjct: 189 VPDGVDVI 196


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VIPDGTDTV 10
V+ DG DTV
Sbjct: 590 VVDDGPDTV 598


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 2 VIPDGTDTV 10
V PDGT+ V
Sbjct: 258 VYPDGTEKV 266


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 1 RVIPDGTDTV 10
+ PDGTD +
Sbjct: 301 KATPDGTDRI 310


>sp|EF1B_THEPD|ELONGATION factor 1-beta|Thermofilum pendens (strain DSM 2475

Query: 1 RVIPDGTDT 9
RV+PD +T
Sbjct: 9 RVLPDDAET 17


>sp|GGR_METS3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 PDGTD 8
PDGTD
Sbjct: 77 PDGTD 81


>sp|ALF1_AERPE|PROBABLE fructose-bisphosphate aldolase class 1|Aeropyrum pernix (strain

Query: 1 RVIPDGTDTV 10
R++PDG +
Sbjct: 15 RILPDGRSVI 24


>sp|AGLJ_HALVD|GLYCOSYLTRANSFERASE AglJ|Haloferax volcanii (strain ATCC 29605

Query: 4 PDGTDT 9
PDG+DT
Sbjct: 199 PDGSDT 204


>sp|SUA5_PYRAB|THREONYLCARBAMOYL-AMP synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 RVIPDGTDTV 10
RVI G DTV
Sbjct: 109 RVITGGLDTV 118




127|SequenceR|640|631|IWWLPRVIPD

>sp|KAE1B_METS3|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 WWLPRVIP 9
+W+P++IP
Sbjct: 53 YWIPKLIP 60


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 5 PRVIPD 10
PR+IPD
Sbjct: 100 PRIIPD 105


>sp|BRIX_METMA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina mazei

Query: 2 WWLPRVIP 9
+W P V+P
Sbjct: 87 YWFPDVLP 94


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 PRVIPD 10
PR++PD
Sbjct: 100 PRIVPD 105


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 5 PRVIPD 10
PR++PD
Sbjct: 100 PRIVPD 105


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 5 PRVIPD 10
PR++PD
Sbjct: 100 PRIVPD 105


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 5 PRVIPD 10
PR++PD
Sbjct: 100 PRIVPD 105


>sp|SRP54_ACIAM|SIGNAL recognition particle 54 kDa|Acidianus ambivalens (Desulfurolobus

Query: 5 PRVIPD 10
P+VIPD
Sbjct: 90 PKVIPD 95


>sp|DGGGP_HALWD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IWWLPRVIP 9
IW+L V+P
Sbjct: 233 IWYLTLVVP 241


>sp|PMD_HALVD|PHOSPHOMEVALONATE decarboxylase|Haloferax volcanii (strain ATCC 29605

Query: 1 IWWLPRVI 8
++W PR I
Sbjct: 248 VYWQPRTI 255


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IWWLPRVI 8
+W++P+V+
Sbjct: 510 VWFVPQVV 517


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IWWLPRVI 8
+W++P+V+
Sbjct: 510 VWFVPQVV 517


>sp|ARCH_PYRHO|PROTEIN archease|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WLPRVIPD 10
W+ +++PD
Sbjct: 134 WMAQLVPD 141


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IWWLPRVI 8
+W++P+V+
Sbjct: 510 VWFVPQVV 517


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IWWLPRVI 8
I W+P+V+
Sbjct: 128 IGWIPKVV 135


>sp|ARCH_PYRFU|PROTEIN archease|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WLPRVIPD 10
W+ +++PD
Sbjct: 134 WMAQLVPD 141


>sp|ARCH_PYRAB|PROTEIN archease|Pyrococcus abyssi (strain GE5 /

Query: 3 WLPRVIPD 10
W+ +++PD
Sbjct: 134 WMAQLVPD 141


>sp|BACS1_HALSA|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 700922

Query: 4 LPRVIPD 10
PRV+PD
Sbjct: 146 FPRVVPD 152


>sp|BACS1_HALS3|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 29341

Query: 4 LPRVIPD 10
PRV+PD
Sbjct: 146 FPRVVPD 152


>sp|QUEC_METKA|7-CYANO-7-DEAZAGUANINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 WWLPRVIPD 10
+WL R+ PD
Sbjct: 65 FWLRRLCPD 73


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 WLPRVIPD 10
WL R PD
Sbjct: 397 WLERYAPD 404


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 WLPRVIP 9
W P VIP
Sbjct: 62 WFPIVIP 68


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WWLPRVIPD 10
+WL +V+P+
Sbjct: 950 YWLKQVMPE 958


>sp|COBS_PYRCJ|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 WWLPRVIP 9
W LP V+P
Sbjct: 27 WALPYVVP 34




128|SequenceR|645|636|EDGPAIWWLP

>sp|Y1589_METAC|UPF0228 protein MA_1589|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DGPAIWWLP 10
DGP +W+P
Sbjct: 168 DGPRTYWIP 176


>sp|Y511_METAC|UPF0228 protein MA_0511|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DGPAIWWLP 10
DGP +W+P
Sbjct: 163 DGPLTYWIP 171


>sp|Y2215_HALMD|PUTATIVE lipoprotein Hmuk_2215|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 EDGPAIWW 8
EDG A WW
Sbjct: 112 EDGYADWW 119


>sp|COXX1_PICTO|PROTOHEME IX farnesyltransferase 1|Picrophilus torridus (strain ATCC 700027

Query: 4 PAIWWL 9
P +WWL
Sbjct: 20 PQVWWL 25


>sp|Y3117_METAC|UPF0228 protein MA_3117|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DGPAIW 7
DGPA W
Sbjct: 141 DGPADW 146


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 AIWWL 9
AIWW+
Sbjct: 393 AIWWV 397


>sp|PYRK_METJA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocaldococcus

Query: 1 EDGPAIW 7
+DGP W
Sbjct: 227 KDGPVFW 233


>sp|Y3119_METAC|UPF0228 protein MA_3119|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DGPAIWWL 9
DGP +W+
Sbjct: 188 DGPLTYWI 195


>sp|3MGH_METAR|PUTATIVE 3-methyladenine DNA glycosylase|Methanocella arvoryzae (strain DSM

Query: 1 EDGPAI 6
EDGPA+
Sbjct: 155 EDGPAV 160


>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 IWWLP 10
+WW P
Sbjct: 526 VWWSP 530


>sp|HMEC_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus

Query: 2 DGPAIWW 8
D P WW
Sbjct: 60 DSPYTWW 66


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 EDGPAIW 7
EDG IW
Sbjct: 549 EDGKTIW 555


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 1 EDGPAIW 7
ED P IW
Sbjct: 319 EDDPIIW 325


>sp|Y2131_ARCFU|UNCHARACTERIZED protein AF_2131|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DGPAIWWL 9
+GP ++WL
Sbjct: 301 EGPILFWL 308




129|SequenceR|650|641|IRHATEDGPA

>sp|FAEHP_METPE|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IRHATED 7
IRHATE+
Sbjct: 368 IRHATEE 374


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 HATEDGP 9
HATE GP
Sbjct: 384 HATEPGP 390


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 4 ATEDGP 9
AT+DGP
Sbjct: 264 ATQDGP 269




130|SequenceR|655|646|LFQSDIRHAT

>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 FQSDIRHAT 10
F D+RHAT
Sbjct: 160 FAGDVRHAT 168


>sp|FAEHP_METPE|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 DIRHAT 10
DIRHAT
Sbjct: 367 DIRHAT 372


>sp|MDH_SULAC|MALATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FQSDIRHA 9
F+ +IRHA
Sbjct: 42 FEHEIRHA 49




131|SequenceR|660|651|LTDGILFQSD

>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 3 DGILFQSD 10
DGILF +D
Sbjct: 163 DGILFSND 170


>sp|GGGPS_PYRAE|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LTDGILFQS 9
L DG+LF S
Sbjct: 81 LADGVLFLS 89


>sp|Y433_METJA|UNCHARACTERIZED protein MJ0433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTDGILFQS 9
+ DGILF+S
Sbjct: 123 VIDGILFKS 131


>sp|CBID_ARCFU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTDGILFQSD 10
+T+GI+F+++
Sbjct: 100 VTNGIIFEAE 109


>sp|DHQS_METS3|3-DEHYDROQUINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 TDGILFQSD 10
TDG++F+++
Sbjct: 161 TDGVIFEAN 169




132|SequenceR|665|656|VPAVLLTDGI

>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 VPAVLLTDGI 10
+PA ++ DG+
Sbjct: 361 IPATVIVDGV 370


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 VPAVLLTDGI 10
+PA ++ DG+
Sbjct: 355 IPATVIVDGV 364


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 2 PAVLLTDGI 10
P VLLT GI
Sbjct: 100 PTVLLTVGI 108


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 1 VPAVLLTD 8
+PAV LTD
Sbjct: 145 IPAVQLTD 152


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VPAVLLTD 8
+PAV LTD
Sbjct: 145 IPAVQLTD 152


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VPAVLLTD 8
+PAV LTD
Sbjct: 142 IPAVQLTD 149


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VPAVLLTD 8
+PAV LTD
Sbjct: 147 IPAVQLTD 154


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 1 VPAVLLTD 8
+PAV LTD
Sbjct: 142 IPAVQLTD 149


>sp|UPPP_SACI4|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain M.14.25 /

Query: 4 VLLTDGI 10
VLLTDGI
Sbjct: 123 VLLTDGI 129


>sp|TOP6A_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VPAVLLTDG 9
+P V+ TDG
Sbjct: 238 LPVVVFTDG 246


>sp|VORB_METTH|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter thermautotrophicus

Query: 2 PAVLLTDGI 10
P V+LTD +
Sbjct: 163 PVVVLTDAV 171


>sp|SRP54_PYRHO|SIGNAL recognition particle 54 kDa|Pyrococcus horikoshii (strain ATCC

Query: 2 PAVLLTDGI 10
P VLLT G+
Sbjct: 100 PTVLLTVGV 108


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 1 VPAVLLTDG 9
VP ++++DG
Sbjct: 86 VPCIIVSDG 94


>sp|Y057_METKA|UPF0215 protein MK0057|Methanopyrus kandleri (strain AV19 /

Query: 4 VLLTDGI 10
V+LTDGI
Sbjct: 74 VILTDGI 80


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VPAVLLTDGI 10
VP +++ DGI
Sbjct: 74 VPTIVVNDGI 83




133|SequenceR|670|661|KGPELVPAVL

>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 KGPELVPAVL 10
KGPE V A+L
Sbjct: 367 KGPEAVGAIL 376


>sp|R15PI_HALTV|RIBOSE 1,5-bisphosphate isomerase|Haloterrigena turkmenica (strain ATCC

Query: 1 KGPELVPAVL 10
+GP++ PAV+
Sbjct: 4 RGPDVAPAVV 13


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 1 KGPELVPAV 9
KGP L+PA+
Sbjct: 203 KGPALIPAL 211


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 GPELVP 7
GPE+VP
Sbjct: 98 GPEIVP 103


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PELVPA 8
PEL+PA
Sbjct: 210 PELIPA 215


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 2 GPELVP 7
GPE+VP
Sbjct: 98 GPEIVP 103


>sp|MTBA_METAC|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina acetivorans (strain ATCC

Query: 2 GPELVPAVL 10
G E+VPA+L
Sbjct: 167 GEEIVPALL 175


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 2 GPELVP 7
GPE+VP
Sbjct: 98 GPEIVP 103


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 2 GPELVP 7
GPE+VP
Sbjct: 98 GPEIVP 103


>sp|AATB_METB6|A-TYPE ATP synthase subunit B|Methanoregula boonei (strain DSM 21154

Query: 2 GPELVP 7
GPE+VP
Sbjct: 98 GPEIVP 103


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 1 KGPELVP 7
+GPEL P
Sbjct: 13 RGPELTP 19


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 2 GPELVP 7
GPE++P
Sbjct: 105 GPEIIP 110


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 GPELVP 7
GPE+VP
Sbjct: 107 GPEIVP 112


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GPELVP 7
GPE++P
Sbjct: 106 GPEIIP 111


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GPELVP 7
GPE+VP
Sbjct: 105 GPEIVP 110




134|SequenceR|675|666|VDREQKGPEL

>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 3 REQKGPE 9
RE+ GPE
Sbjct: 98 REESGPE 104


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 3 REQKGPEL 10
REQ+ PEL
Sbjct: 352 REQRQPEL 359


>sp|SRP19_PYRHO|SIGNAL recognition particle 19 kDa|Pyrococcus horikoshii (strain ATCC

Query: 1 VDREQKGPEL 10
VDRE+ P L
Sbjct: 51 VDREKLNPRL 60




135|SequenceR|680|671|GAPLYVDREQ

>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 1 GAPLYVD 7
G+PLYVD
Sbjct: 231 GSPLYVD 237


>sp|Y756_METJA|UNCHARACTERIZED protein MJ0756|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PLYVDRE 9
PLY DRE
Sbjct: 95 PLYYDRE 101


>sp|KDPC_HALSA|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 GAPLYVDREQ 10
G+P+YVD ++
Sbjct: 42 GSPVYVDGQE 51


>sp|KDPC_HALS3|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 GAPLYVDREQ 10
G+P+YVD ++
Sbjct: 42 GSPVYVDGQE 51


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GAPLYVDREQ 10
G PLYV E+
Sbjct: 33 GTPLYVMSEE 42


>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GAPLYVDREQ 10
G P VDRE+
Sbjct: 211 GTPFDVDRER 220


>sp|Y133_METTH|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 2 APLYVDR 8
APLY DR
Sbjct: 204 APLYSDR 210


>sp|ARGB_METPE|ACETYLGLUTAMATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 APLYVDRE 9
AP+ +DRE
Sbjct: 174 APIAIDRE 181


>sp|Y583_METTM|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 2 APLYVDR 8
APLY DR
Sbjct: 202 APLYSDR 208


>sp|ASPD_METHJ|L-ASPARTATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GAPLYVDREQ 10
GAP Y D ++
Sbjct: 44 GAPAYADFQE 53


>sp|ARLY_NATPD|ARGININOSUCCINATE lyase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GAPLYVDREQ 10
G P +DRE+
Sbjct: 203 GTPFDIDRER 212


>sp|Y169_METJA|UNCHARACTERIZED ATP-binding protein MJ0169|Methanocaldococcus jannaschii (strain

Query: 1 GAPLYVDRE 9
G P+Y++ E
Sbjct: 235 GVPIYIEDE 243


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 1 GAPLYVDREQ 10
G+PLYV ++
Sbjct: 325 GSPLYVANDE 334


>sp|HJC_SULTO|CROSSOVER junction endodeoxyribonuclease Hjc|Sulfurisphaera tokodaii

Query: 1 GAPLYVDREQ 10
G +Y+++EQ
Sbjct: 62 GQKIYIEKEQ 71


>sp|G3P_HYPBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GAPLYVDREQ 10
G P+YV +E
Sbjct: 49 GIPVYVPKES 58




136|SequenceR|685|676|YSRWKGAPLY

>sp|Y666_PYRAB|UPF0166 protein PYRAB06660|Pyrococcus abyssi (strain GE5 /

Query: 3 RWKGAPLY 10
RW+G PLY
Sbjct: 21 RWEGKPLY 28


>sp|Y1503_PYRHO|UPF0166 protein PH1503|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RWKGAPLY 10
+W+G PLY
Sbjct: 21 KWEGRPLY 28


>sp|UBIX_SACS2|FLAVIN prenyltransferase UbiX|Saccharolobus solfataricus (strain ATCC

Query: 1 YSRWKG 6
Y RWKG
Sbjct: 196 YKRWKG 201


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 1 YSRWKGAPLY 10
YS W+GA +Y
Sbjct: 400 YSVWRGAVIY 409


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WKGAPLY 10
W GAP+Y
Sbjct: 190 WLGAPIY 196


>sp|RL30E_THECE|LARGE ribosomal subunit protein eL30|Thermococcus celer

Query: 1 YSRWKGAPLY 10
Y+R G P+Y
Sbjct: 53 YARLSGIPVY 62


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YSRWKGAPL 9
Y+RWKG L
Sbjct: 181 YNRWKGHDL 189


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 1 YSRWKGAPL 9
YSR KGA L
Sbjct: 72 YSRTKGAEL 80


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SRWKGAP 8
+RW+G P
Sbjct: 241 ARWQGEP 247


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 SRWKGAP 8
+RW+G P
Sbjct: 241 ARWQGEP 247


>sp|Y1845_ARCFU|UNCHARACTERIZED protein AF_1845|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SRWKGAP 8
SRW+G P
Sbjct: 275 SRWRGIP 281


>sp|DTDA_PICTO|D-AMINOACYL-TRNA deacylase|Picrophilus torridus (strain ATCC 700027

Query: 4 WKGAP 8
WKG+P
Sbjct: 230 WKGSP 234


>sp|Y2399_ARCFU|UNCHARACTERIZED tRNA/rRNA methyltransferase AF_2399|Archaeoglobus fulgidus

Query: 2 SRWKGAPLY 10
+R KG P+Y
Sbjct: 38 ARKKGVPIY 46


>sp|TYW3_METJA|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 YSRWKG 6
YSRW G
Sbjct: 64 YSRWLG 69


>sp|RL2_HYPBU|LARGE ribosomal subunit protein uL2|Hyperthermus butylicus (strain DSM

Query: 3 RWKGAPLY 10
R KG+PLY
Sbjct: 10 RGKGSPLY 17


>sp|RL2_METLZ|LARGE ribosomal subunit protein uL2|Methanocorpusculum labreanum

Query: 2 SRWKGAPLY 10
SR KG P Y
Sbjct: 9 SRGKGGPTY 17


>sp|GLPK_HALVD|GLYCEROL kinase|Haloferax volcanii (strain ATCC 29605

Query: 1 YSRWKGA 7
Y RWK A
Sbjct: 493 YGRWKEA 499


>sp|ACYP_METS5|ACYLPHOSPHATASE sedula (strain ATCC 51363

Query: 4 WKGAPL 9
WKG PL
Sbjct: 63 WKGPPL 68


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WKGAPLY 10
W G+P+Y
Sbjct: 183 WLGSPIY 189


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YSRWKGAP 8
Y RWK P
Sbjct: 88 YKRWKEVP 95


>sp|BRIX_PYRAB|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus abyssi

Query: 4 WKGAPL 9
WKG PL
Sbjct: 59 WKGNPL 64


>sp|BRIX_PYRHO|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus horikoshii

Query: 4 WKGAPL 9
WKG PL
Sbjct: 59 WKGNPL 64


>sp|BRIX_THEKO|PROBABLE Brix domain-containing ribosomal biogenesis|Thermococcus

Query: 4 WKGAPL 9
WKG PL
Sbjct: 59 WKGNPL 64


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YSRWKGAPLY 10
YS++ G P Y
Sbjct: 81 YSKYLGQPYY 90


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC

Query: 1 YSRWKGAPLY 10
Y W+ +PL+
Sbjct: 84 YRLWRPSPLF 93


>sp|LYEL_HALVD|LYCOPENE elongase/hydratase|Haloferax volcanii (strain ATCC 29605

Query: 2 SRWKGAPL 9
+RW+G P+
Sbjct: 104 ARWRGDPV 111


>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 4 WKGAPL 9
WKG PL
Sbjct: 59 WKGNPL 64




137|SequenceR|690|681|FLEGKYSRWK

>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FLEGKYSRWK 10
LEGK RWK
Sbjct: 77 LLEGKNLRWK 86


>sp|LEUC_SULAC|3-ISOPROPYLMALATE dehydratase large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LEGKYSRW 9
LEGK +RW
Sbjct: 162 LEGKPARW 169


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 LEGKYSRW 9
+EGKYS W
Sbjct: 339 VEGKYSGW 346


>sp|PORC_THELN|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Thermococcus litoralis

Query: 1 FLEGKY 6
FLEGKY
Sbjct: 26 FLEGKY 31


>sp|PORC_PYRHO|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus horikoshii

Query: 1 FLEGKY 6
FLEGKY
Sbjct: 26 FLEGKY 31


>sp|PORC_PYRFU|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus furiosus (strain

Query: 1 FLEGKY 6
FLEGKY
Sbjct: 26 FLEGKY 31


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 KYSRWK 10
KY RWK
Sbjct: 453 KYGRWK 458


>sp|ENO_METMA|ENOLASE mazei (strain ATCC BAA-159

Query: 1 FLEGKYSR 8
FLE KY R
Sbjct: 202 FLENKYGR 209


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 1 FLEGKYSR 8
F+EGKY +
Sbjct: 165 FIEGKYRK 172


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 KYSRWK 10
KYS WK
Sbjct: 185 KYSEWK 190


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 LEGKYSRW 9
LEGK ++W
Sbjct: 164 LEGKPAKW 171


>sp|PORC_PYRAB|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus abyssi (strain

Query: 1 FLEGKY 6
F+EGKY
Sbjct: 26 FIEGKY 31


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 1 FLEGKY 6
FLEG+Y
Sbjct: 44 FLEGRY 49


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 2 LEGKYSRW 9
+EGK RW
Sbjct: 352 VEGKEHRW 359


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain ATCC

Query: 2 LEGKYSRW 9
+EGK RW
Sbjct: 352 VEGKEHRW 359


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 1 FLEGKYS 7
F EGKYS
Sbjct: 759 FTEGKYS 765


>sp|SYT_METKA|THREONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LEGKYSRWK 10
LEG+Y R++
Sbjct: 482 LEGQYKRFE 490


>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LEGKYSRW 9
LEGK +W
Sbjct: 162 LEGKPGKW 169


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 5 KYSRWK 10
KY +WK
Sbjct: 453 KYGKWK 458


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 GKYSRW 9
GKYS W
Sbjct: 342 GKYSGW 347


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 EGKYSRWK 10
+ KY RW+
Sbjct: 490 DSKYGRWE 497


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 3 EGKYSRWK 10
+ KY RW+
Sbjct: 490 DSKYGRWE 497


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 LEGKYSRWK 10
L+G+Y W+
Sbjct: 361 LKGRYLEWE 369


>sp|SRP19_IGNH4|SIGNAL recognition particle 19 kDa|Ignicoccus hospitalis (strain KIN4/I

Query: 2 LEGKYSR 8
LEGKY R
Sbjct: 58 LEGKYPR 64


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LEGKYSRW 9
L G+YS W
Sbjct: 337 LSGEYSGW 344


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LEGKYSRW 9
L G+YS W
Sbjct: 337 LSGEYSGW 344


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LEGKYSRWK 10
L KY RWK
Sbjct: 473 LSEKYRRWK 481


>sp|SYE_METTH|GLUTAMATE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LEGKYSRW 9
L G+YS W
Sbjct: 340 LRGEYSGW 347


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LEGKYSRW 9
L G+YS W
Sbjct: 337 LSGEYSGW 344


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LEGKYSRW 9
L G+YS W
Sbjct: 337 LSGEYSGW 344


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LEGKYSRW 9
L G+YS W
Sbjct: 337 LSGEYSGW 344


>sp|Y1222_PYRFU|PUTATIVE antitoxin PF1222|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LEGKYSRWK 10
LEG++ +W+
Sbjct: 64 LEGEFEKWE 72




138|SequenceR|695|686|VPTKDFLEGK

>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VPTKDFLE 8
+P KDFLE
Sbjct: 208 LPDKDFLE 215


>sp|NADK_AERPE|NAD kinase|Aeropyrum pernix (strain ATCC 700893

Query: 4 KDFLEGK 10
+DFLEG+
Sbjct: 109 RDFLEGR 115


>sp|SPSS_METJA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PTKDFLE 8
P KDFLE
Sbjct: 59 PIKDFLE 65


>sp|RS4_PYRIL|SMALL ribosomal subunit protein uS4|Pyrobaculum islandicum (strain DSM

Query: 2 PTKDFLEGK 10
P K +LEGK
Sbjct: 7 PKKKYLEGK 15


>sp|RS4_CALMQ|SMALL ribosomal subunit protein uS4|Caldivirga maquilingensis (strain

Query: 2 PTKDFLEGK 10
P K ++EGK
Sbjct: 7 PKKKYVEGK 15


>sp|HIS4_METKA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanopyrus kandleri (strain

Query: 1 VPTKDFLEGK 10
+P+ D +EGK
Sbjct: 6 IPSVDVVEGK 15


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 2 PTKDFLEGK 10
P K LEGK
Sbjct: 350 PVKSVLEGK 358


>sp|MDH_PYRIL|MALATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VPTKDFLEG 9
VP+K F+ G
Sbjct: 180 VPSKSFIHG 188


>sp|DNAG_STAMF|DNA primase DnaG|Staphylothermus marinus (strain ATCC 43588

Query: 1 VPTKDFLE 8
VPT+++LE
Sbjct: 261 VPTREYLE 268


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 PTKDFLEGK 10
P K+F EG+
Sbjct: 23 PVKEFEEGR 31


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VPTKDFLEG 9
+P KDFL G
Sbjct: 209 LPEKDFLFG 217


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PTKDFLEG 9
P KDFL G
Sbjct: 209 PEKDFLPG 216


>sp|MDH_PYRCJ|MALATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VPTKDFLEG 9
VP+K F+ G
Sbjct: 180 VPSKSFVHG 188


>sp|MDH_METAC|MALATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VPTKDFLEGK 10
+PT +LEG+
Sbjct: 247 LPTSAYLEGQ 256


>sp|RL2_METS5|LARGE ribosomal subunit protein uL2|Metallosphaera sedula (strain ATCC

Query: 1 VPTKDFLEG 9
VP KD EG
Sbjct: 93 VPAKDLPEG 101


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 KDFLEGK 10
KDF EGK
Sbjct: 327 KDFAEGK 333


>sp|HCGC_METJA|6-CARBOXYMETHYL-5-METHYL-4-HYDROXYPYRIDIN-2-OL 3-C-methyltransferase HcgC|Methanocaldococcus jannaschii (strain

Query: 4 KDFLEGK 10
+DFLEG+
Sbjct: 39 RDFLEGE 45


>sp|TRUD_METBU|PROBABLE tRNA pseudouridine synthase D|Methanococcoides burtonii (strain DSM

Query: 3 TKDFLEG 9
TKD++EG
Sbjct: 224 TKDYIEG 230


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KDFLEGK 10
KDF EGK
Sbjct: 327 KDFAEGK 333


>sp|LYSZ_SULAC|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PTKDFLEGK 10
P K+ LEGK
Sbjct: 248 PIKNALEGK 256


>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DFLEGK 10
DF+EGK
Sbjct: 52 DFMEGK 57


>sp|Y284_METJA|UNCHARACTERIZED protein MJ0284|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PTKDFL 7
PTKDF+
Sbjct: 160 PTKDFV 165




139|SequenceR|700|691|YDTLLVPTKD

>sp|TRPD_NATPD|ANTHRANILATE phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YDTLLVPT 8
YD LVPT
Sbjct: 193 YDEALVPT 200


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 YDTLLVPT 8
YD L VPT
Sbjct: 379 YDVLTVPT 386


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 YDTLLVPT 8
YD L VPT
Sbjct: 379 YDVLTVPT 386


>sp|PUR5_METBU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DTLLVPTK 9
D LL+PT+
Sbjct: 217 DELLIPTR 224


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 YDTLLVPT 8
YD L VPT
Sbjct: 379 YDVLTVPT 386


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 YDTLLVPT 8
YD L VPT
Sbjct: 379 YDVLTVPT 386


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 2 DTLLVPTKD 10
DT+ VPT D
Sbjct: 296 DTITVPTLD 304


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YDTLLVP 7
YDTL VP
Sbjct: 188 YDTLRVP 194


>sp|PURQ_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YDTLLVP 7
YD L+VP
Sbjct: 49 YDALIVP 55


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 1 YDTLLVPT 8
YD L++PT
Sbjct: 420 YDALIMPT 427


>sp|GATA_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 YDTLLVPT 8
YD LL PT
Sbjct: 386 YDILLSPT 393


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain

Query: 1 YDTLLVPT 8
YDTLLV T
Sbjct: 48 YDTLLVTT 55


>sp|Y426_METJA|UNCHARACTERIZED protein MJ0426|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDTLLVPT 8
Y T+L+PT
Sbjct: 32 YITILIPT 39


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DTLLVPTKD 10
D LL+P K+
Sbjct: 556 DNLLIPAKE 564


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 TLLVPTKD 10
+LLVP KD
Sbjct: 658 SLLVPLKD 665




140|SequenceR|705|696|DLDVPYDTLL

>sp|NROR_PYRFU|NAD(P)H:RUBREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DVPYDTLL 10
+VPYDTL+
Sbjct: 91 EVPYDTLV 98


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLDVPYDTL 9
D+DVP++TL
Sbjct: 103 DVDVPFETL 111


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DLDVPYDTLL 10
DL+ PY T+
Sbjct: 377 DLNTPYSTIF 386


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 DLDVPYD 7
+ D+PYD
Sbjct: 54 EFDIPYD 60


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 DLDVPYD 7
D+D+PYD
Sbjct: 8 DVDLPYD 14


>sp|SECE_HALMA|PROTEIN translocase subunit SecE|Haloarcula marismortui (strain ATCC

Query: 2 LDVPYD 7
+DVPYD
Sbjct: 1 MDVPYD 6


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLDVPYDTL 9
+LD PY+ L
Sbjct: 159 NLDTPYEKL 167


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLDVPYD 7
+ D+PYD
Sbjct: 54 EFDIPYD 60


>sp|DPHB_METAR|DIPHTHINE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 DVPYDTLL 10
+ PYDT+L
Sbjct: 146 ETPYDTIL 153


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 3 DVPYDTLL 10
D+ YDTLL
Sbjct: 260 DLDYDTLL 267


>sp|DNAK_THEVO|CHAPERONE protein DnaK|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DLDVPYDTL 9
D+D+PY T+
Sbjct: 257 DIDLPYITV 265


>sp|DNAK_THEAC|CHAPERONE protein DnaK|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DLDVPYDTL 9
D+D+PY T+
Sbjct: 256 DIDLPYITV 264


>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DLDVPYD 7
DL+VPY+
Sbjct: 176 DLNVPYE 182


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 LDVPYDTL 9
L PYDTL
Sbjct: 26 LSKPYDTL 33


>sp|HEM3_METBU|PROBABLE porphobilinogen deaminase|Methanococcoides burtonii (strain DSM

Query: 3 DVPYDTLL 10
D PYD LL
Sbjct: 95 DSPYDVLL 102


>sp|GCH3_METVS|GTP cyclohydrolase III|Methanococcus vannielii (strain ATCC 35089

Query: 1 DLDVPYDTLL 10
DL+ YDT L
Sbjct: 148 DLETAYDTYL 157


>sp|NADE_METJA|NH(3)-DEPENDENT NAD(+) synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLDVPYDTL 9
+LD+ Y+TL
Sbjct: 202 ELDIKYETL 210


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 LDVPYDTL 9
L PYDTL
Sbjct: 26 LSKPYDTL 33


>sp|THI4_HALWD|THIAMINE thiazole synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DLDVPYD 7
+LDVPY+
Sbjct: 92 ELDVPYE 98


>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix

Query: 3 DVPYDTLL 10
D PYD LL
Sbjct: 25 DCPYDRLL 32


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DLDVPYDTL 9
D D PY T+
Sbjct: 142 DFDDPYQTI 150


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 1 DLDVPYDTL 9
D+DVP++ L
Sbjct: 103 DVDVPFEKL 111


>sp|GCH3_METM6|GTP cyclohydrolase III|Methanococcus maripaludis (strain C6 /

Query: 1 DLDVPYDTLL 10
DL+ YDT L
Sbjct: 148 DLETAYDTYL 157


>sp|GCH3_METMP|GTP cyclohydrolase III|Methanococcus maripaludis (strain DSM 14266

Query: 1 DLDVPYDTLL 10
DL+ YDT L
Sbjct: 148 DLETAYDTYL 157


>sp|GCH3_METM5|GTP cyclohydrolase III|Methanococcus maripaludis (strain C5 /

Query: 1 DLDVPYDTLL 10
DL+ YDT L
Sbjct: 148 DLETAYDTYL 157


>sp|GCH3_METM7|GTP cyclohydrolase III|Methanococcus maripaludis (strain C7 /

Query: 1 DLDVPYDTLL 10
DL+ YDT L
Sbjct: 148 DLETAYDTYL 157


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 3 DVPYDTLL 10
D PYDT L
Sbjct: 251 DTPYDTGL 258


>sp|Y144_METJA|UNCHARACTERIZED protein MJ0144|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLDVPYDTLL 10
D+D YD LL
Sbjct: 98 DIDEAYDKLL 107


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLDVPYDTL 9
D+DVP++ L
Sbjct: 103 DVDVPFEKL 111


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 DVPYDTLL 10
D PYD L+
Sbjct: 101 DPPYDVLI 108


>sp|SECE_HALLT|PROTEIN translocase subunit SecE|Halorubrum lacusprofundi (strain ATCC

Query: 2 LDVPYD 7
+DVPYD
Sbjct: 1 MDVPYD 6


>sp|Y689_ARCFU|UNCHARACTERIZED protein AF_0689|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDVPYDTL 9
+D+PY+ L
Sbjct: 59 IDIPYEKL 66


>sp|Y1163_METJA|UPF0173 metal-dependent hydrolase MJ1163|Methanocaldococcus jannaschii

Query: 3 DVPYDTLL 10
D+PYD ++
Sbjct: 27 DLPYDEIM 34


>sp|CPGS_METS3|CYCLIC 2,3-diphosphoglycerate synthetase|Methanobrevibacter smithii

Query: 3 DVPYDTLL 10
D+PYD ++
Sbjct: 70 DIPYDIIV 77


>sp|Y164_METJA|UNCHARACTERIZED protein MJ0164|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDVPYDTLL 10
LD+P D L+
Sbjct: 138 LDIPLDNLI 146




141|SequenceR|714|701|SAWTFYAIEDLDVP

>sp|Y2141_ARCFU|UNCHARACTERIZED protein AF_2141|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FYAIEDLDVP 14
F+AIED++VP
Sbjct: 107 FFAIEDMEVP 116


>sp|Y924_ARCFU|UNCHARACTERIZED protein AF_0924|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WTFYAIEDLD 12
WTFYA ED +
Sbjct: 145 WTFYAKEDFE 154


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SAWTFYAIEDLDV 13
SA++FY E++D+
Sbjct: 247 SAFSFYYDENIDI 259


>sp|MTRC_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain C5

Query: 2 AWTFYAIEDLDV 13
AW +AI LD+
Sbjct: 213 AWLVFAIAKLDI 224


>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain ATCC

Query: 2 AWTFYAIEDLD 12
+W Y IED D
Sbjct: 231 SWILYEIEDGD 241


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 2 AWTFYAIEDLD 12
+W Y IED D
Sbjct: 231 SWILYEIEDGD 241


>sp|COFC_ARCPA|2-PHOSPHO-L-LACTATE guanylyltransferase|Archaeoglobus profundus (strain DSM 5631

Query: 4 TFYAIEDLDVP 14
+FYA D+D P
Sbjct: 154 SFYASVDIDTP 164


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 AWTFYAIEDLDV 13
A++FY E+LD+
Sbjct: 247 AFSFYYQENLDI 258


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 TFYAIEDLDV 13
T+Y I+D+DV
Sbjct: 369 TYYVIQDVDV 378


>sp|Y865_METJA|PUTATIVE methylthiotransferase MJ0865|Methanocaldococcus jannaschii (strain

Query: 2 AWTFYAIE 9
W FY IE
Sbjct: 278 GWVFYGIE 285


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 WTFYAIEDL 11
W FY ++DL
Sbjct: 168 WQFYKLKDL 176


>sp|MTRC_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain DSM

Query: 2 AWTFYAIEDLDV 13
AW ++I LD+
Sbjct: 213 AWLIFSIAKLDI 224


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC

Query: 8 IEDLDVP 14
+ED+DVP
Sbjct: 15 LEDMDVP 21


>sp|MTRC_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus vannielii (strain ATCC

Query: 2 AWTFYAIEDLDV 13
AW ++I LD+
Sbjct: 220 AWLVFSIAKLDI 231


>sp|MTRC_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain C7

Query: 2 AWTFYAIEDLDV 13
AW ++I LD+
Sbjct: 213 AWLVFSIAKLDI 224


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 7 AIEDLDVP 14
AIED D+P
Sbjct: 501 AIEDGDIP 508


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 7 AIEDLDVP 14
AIED D+P
Sbjct: 501 AIEDGDIP 508


>sp|CAS5_ARCFU|CRISPR-ASSOCIATED protein Cas5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FYAIEDLDV 13
FYA+ D D+
Sbjct: 59 FYAVRDADI 67


>sp|GLMD_THEKO|GLUCOSAMINE-6-PHOSPHATE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 7 AIEDLDVP 14
A+E LDVP
Sbjct: 101 ALESLDVP 108


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 8 IEDLDVP 14
+E+LDVP
Sbjct: 314 VEELDVP 320


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 7 AIEDLDVP 14
A+E LD+P
Sbjct: 247 ALESLDIP 254


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 7 AIEDLDVP 14
A+E LD+P
Sbjct: 247 ALESLDIP 254


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 7 AIEDLDVP 14
A+E LD+P
Sbjct: 247 ALESLDIP 254


>sp|PURQ_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina barkeri (strain Fusaro /

Query: 3 WTFYAIEDLDVP 14
WT +E +D P
Sbjct: 114 WTNLRVETVDTP 125


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 9 EDLDVP 14
EDLDVP
Sbjct: 97 EDLDVP 102


>sp|Y748_METKA|UPF0212 protein MK0748|Methanopyrus kandleri (strain AV19 /

Query: 1 SAWTFYAIEDLD 12
+AW Y ++D D
Sbjct: 15 AAWIVYNVDDED 26


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 3 WTFYAIEDLDV 13
+ +YA EDL++
Sbjct: 173 YNYYAAEDLEL 183


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 3 WTFYAIEDLDV 13
+ +YA EDL++
Sbjct: 173 YNYYAAEDLEL 183


>sp|RS2_METTH|SMALL ribosomal subunit protein uS2|Methanothermobacter

Query: 9 EDLDVP 14
EDLD+P
Sbjct: 185 EDLDIP 190


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WTFYAIEDL 11
WTFY + ++
Sbjct: 450 WTFYKLNEI 458


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 1 SAWTFYAIEDLDVP 14
SAW A D DVP
Sbjct: 150 SAWRAVAPYDSDVP 163


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 7 AIEDLDVP 14
A+E+LD+P
Sbjct: 126 ALEELDIP 133


>sp|BIOB_META3|BIOTIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 FYAIEDLDV 13
FY +++LDV
Sbjct: 216 FYELKELDV 224


>sp|RL6_PYRAE|LARGE ribosomal subunit protein uL6|Pyrobaculum aerophilum (strain ATCC

Query: 6 YAIEDLDVP 14
Y++E++++P
Sbjct: 5 YSVEEVEIP 13


>sp|URED_HALMA|UREASE accessory protein UreD|Haloarcula marismortui (strain ATCC 43049

Query: 1 SAWTFYAIEDLDVP 14
+AW IE LD P
Sbjct: 279 AAWDHARIELLDAP 292


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FYAIEDLDV 13
FY+++D D+
Sbjct: 135 FYSVDDFDI 143


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 7 AIEDLDVP 14
AIE+L+VP
Sbjct: 698 AIENLEVP 705


>sp|BACH_HALSA|HALORHODOPSIN salinarum (strain ATCC 700922

Query: 3 WTFYAIE 9
W FYAI
Sbjct: 162 WAFYAIS 168


>sp|BACH_HALS3|HALORHODOPSIN salinarum (strain ATCC 29341

Query: 3 WTFYAIE 9
W FYAI
Sbjct: 162 WAFYAIS 168




THE END