MYORG_HUMAN Blast Output
Archaea
1|Sequence|1|10|MLQNPQEKSQ

>sp|PSTB_METBF|PHOSPHATE import ATP-binding protein PstB|Methanosarcina barkeri (strain

Query: 1 MLQNPQEKS 9
+ QNP+EKS
Sbjct: 240 IFQNPREKS 248


>sp|ARGB_ARCFU|ACETYLGLUTAMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MLQNPQEKS 9
+L+NP +KS
Sbjct: 213 ILENPDDKS 221




2|Sequence|6|15|QEKSQAYPRR

>sp|SRP19_NATPD|SIGNAL recognition particle 19 kDa|Natronomonas pharaonis (strain ATCC

Query: 2 EKSQAYPR 9
E+S+ YPR
Sbjct: 51 ERSKTYPR 58




3|Sequence|11|20|AYPRRRRPGC

>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain

Query: 3 PRRRRPG 9
P+RR+PG
Sbjct: 79 PKRRKPG 85


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 1 AYPRRR 6
AYPRRR
Sbjct: 185 AYPRRR 190


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PRRRRPG 9
PR+R PG
Sbjct: 137 PRKRGPG 143


>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 3 PRRRRPG 9
PR+R PG
Sbjct: 139 PRKRGPG 145


>sp|UREG_NATPD|UREASE accessory protein UreG|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PRRRRPG 9
PR+R PG
Sbjct: 137 PRKRGPG 143


>sp|Y138_META3|PROTEIN Maeo_0138|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YPRRRRPGC 10
YP+R GC
Sbjct: 51 YPKRNLRGC 59


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 3 PRRRRPGC 10
P R+RP C
Sbjct: 54 PLRQRPRC 61


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 2 YPRRRRPG 9
YPR RPG
Sbjct: 298 YPRFIRPG 305




4|Sequence|16|25|RRPGCYAYRQ

>sp|UVRC_METMP|UVRABC system protein C|Methanococcus maripaludis (strain DSM 14266

Query: 1 RRPGCYAYR 9
+ PGCY Y+
Sbjct: 9 KNPGCYIYK 17


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PGCYAYR 9
PGCY +R
Sbjct: 3 PGCYTHR 9


>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 4 GCYAYR 9
GCY YR
Sbjct: 26 GCYRYR 31


>sp|UVRC_METHJ|UVRABC system protein C|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PGCYAYR 9
PGCY ++
Sbjct: 13 PGCYQFK 19


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RPGCYA 7
+PGCY
Sbjct: 1000 KPGCYG 1005


>sp|UVRC_METAC|UVRABC system protein C|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PGCYAYR 9
PGCY ++
Sbjct: 11 PGCYLFK 17


>sp|UVRC_METBF|UVRABC system protein C|Methanosarcina barkeri (strain Fusaro /

Query: 3 PGCYAYR 9
PGCY ++
Sbjct: 11 PGCYLFK 17


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RPGCYAYR 9
RP C YR
Sbjct: 420 RPKCICYR 427


>sp|UVRC_METMA|UVRABC system protein C|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PGCYAYR 9
PGCY ++
Sbjct: 17 PGCYLFK 23


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RPGCYA 7
RPGC A
Sbjct: 228 RPGCLA 233


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 RPGCYA 7
RPGC A
Sbjct: 223 RPGCLA 228


>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 RPGCYA 7
RPGC A
Sbjct: 228 RPGCLA 233


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 RPGCYA 7
RPGC A
Sbjct: 224 RPGCIA 229


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RPGCYA 7
RPGC A
Sbjct: 224 RPGCIA 229


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RPGCYA 7
RPGC A
Sbjct: 224 RPGCIA 229


>sp|RL2_METKA|LARGE ribosomal subunit protein uL2|Methanopyrus kandleri (strain AV19 /

Query: 1 RRPGCYA 7
R PGCYA
Sbjct: 124 RAPGCYA 130


>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RRPGCYAY 8
R GCY Y
Sbjct: 24 RGEGCYVY 31


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 1 RRPGCYAYRQ 10
R PG Y + Q
Sbjct: 15 REPGVYLFEQ 24


>sp|RNZ_HALVD|RIBONUCLEASE Z|Haloferax volcanii (strain ATCC 29605

Query: 2 RPGCYAYR 9
RPG AYR
Sbjct: 119 RPGNVAYR 126


>sp|CAS4_PYRCJ|CRISPR-ASSOCIATED exonuclease Cas4|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PGCYAYR 9
PG YA+R
Sbjct: 41 PGIYAHR 47


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RPGCY 6
+PGCY
Sbjct: 333 QPGCY 337




5|Sequence|21|30|YAYRQNPEAI

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 AYRQNPEA 9
AYR+NP+A
Sbjct: 686 AYRENPDA 693


>sp|CBIT_METTH|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 YAYRQNPEAI 10
YA +NPEAI
Sbjct: 59 YAIDRNPEAI 68


>sp|PRIL_METTH|DNA primase large subunit PriL|Methanothermobacter thermautotrophicus

Query: 1 YAYRQNPE 8
YAY NPE
Sbjct: 80 YAYLMNPE 87


>sp|KTHY_SULAC|PROBABLE thymidylate kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YRQNPEAI 10
++QNPE I
Sbjct: 77 FKQNPEII 84


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YRQNPEAI 10
YRQNP+ +
Sbjct: 51 YRQNPKEL 58


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YRQNPEAI 10
Y +NPEAI
Sbjct: 45 YVKNPEAI 52


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YAYRQNPEAI 10
Y Y Q PE I
Sbjct: 131 YFYMQKPEII 140


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 3 YRQNPEAI 10
Y +NPEAI
Sbjct: 42 YVKNPEAI 49


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 AYRQNPEAI 10
AYR PE +
Sbjct: 88 AYRMTPEEV 96




6|Sequence|26|35|NPEAIAAAAM

>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 NPEAIAAAAM 10
NPE +AA+A+
Sbjct: 393 NPEVVAASAI 402


>sp|SYT_METKA|THREONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 NPEAIAAAAM 10
NP+AIA AA+
Sbjct: 50 NPKAIAEAAV 59


>sp|LEUC_HALMA|3-ISOPROPYLMALATE dehydratase large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 NPEAIAAAAM 10
NP +AAAA+
Sbjct: 448 NPRMVAAAAI 457


>sp|Y1012_METTP|UPF0200 protein Mthe_1012|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 EAIAAAAM 10
EAIAAA M
Sbjct: 150 EAIAAAGM 157


>sp|URAD_HALVD|2-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE decarboxylase|Haloferax volcanii (strain ATCC 29605

Query: 1 NPEAIAAA 8
NP+AIAAA
Sbjct: 126 NPDAIAAA 133


>sp|LEUC_NATPD|3-ISOPROPYLMALATE dehydratase large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NPEAIAAAAM 10
+PE +AAAA+
Sbjct: 448 SPEMVAAAAV 457


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 NPEAIAAAAM 10
NP +AAAA+
Sbjct: 448 NPRMVAAAAV 457




7|Sequence|31|40|AAAAMYTFLP

>sp|PYRE_THEKO|OROTATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 AAMYTFLP 10
A YTFLP
Sbjct: 161 GAKYTFLP 168


>sp|TRPD_METMP|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 AAAAMYT 7
AAAA+YT
Sbjct: 282 AAAALYT 288


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 AAAAMYT 7
AAAA+YT
Sbjct: 282 AAAALYT 288


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 AAAAMYT 7
AAAA+YT
Sbjct: 282 AAAALYT 288


>sp|FRHB_METTH|COENZYME F420 hydrogenase subunit beta|Methanothermobacter

Query: 1 AAAAMYTFLP 10
AA YTF P
Sbjct: 71 AAGTKYTFSP 80




8|Sequence|36|45|YTFLPDNFSP

>sp|BSUHB_THEKO|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE kodakarensis (strain ATCC BAA-918

Query: 1 YTFLPDNF 8
Y FLP+NF
Sbjct: 116 YEFLPENF 123


>sp|MOAB_METJA|PROBABLE molybdopterin adenylyltransferase|Methanocaldococcus jannaschii

Query: 1 YTFLPDN 7
YT +PDN
Sbjct: 46 YTIIPDN 52


>sp|RTCA_METJA|RNA 3'-terminal phosphate cyclase|Methanocaldococcus jannaschii

Query: 2 TFLPDNFSP 10
TF+P SP
Sbjct: 76 TFIPSKLSP 84


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LPDNFSP 10
LP++FSP
Sbjct: 106 LPEHFSP 112


>sp|TRUA_METBU|TRNA pseudouridine synthase A|Methanococcoides burtonii (strain DSM 6242

Query: 1 YTFLPDNFSP 10
+ +P+NF P
Sbjct: 93 HAIVPENFDP 102


>sp|GVPL_HALMT|GAS vesicle protein L|Haloferax mediterranei (strain ATCC 33500

Query: 1 YTFLPD 6
YTF PD
Sbjct: 315 YTFAPD 320


>sp|GVPL1_HALSA|GAS vesicle protein L1|Halobacterium salinarum (strain ATCC 700922

Query: 1 YTFLPD 6
YTF PD
Sbjct: 273 YTFAPD 278


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YTFLPDNFSP 10
+ ++ DNF P
Sbjct: 61 FIYIADNFDP 70


Query: 1 YTFLPDNFS 9
Y FLP++++
Sbjct: 75 YPFLPESYA 83


>sp|TRUA_THEAC|TRNA pseudouridine synthase A|Thermoplasma acidophilum (strain ATCC

Query: 1 YTFLPDNFSP 10
Y +PD+F+P
Sbjct: 88 YAEVPDDFNP 97


>sp|Y266_ARCFU|UNCHARACTERIZED transporter AF_0266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YTFLPDN 7
Y FLPD+
Sbjct: 184 YPFLPDS 190


>sp|CRYD_NATPD|CRYPTOCHROME DASH|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YTFLPDNFS 9
YTF PD ++
Sbjct: 34 YTFDPDRYT 42


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 FLPDNFS 9
FLPD F+
Sbjct: 133 FLPDRFT 139


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YTFLPDNFS 9
Y FLP++++
Sbjct: 71 YPFLPESYA 79


>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 1 YTFLPDNFSP 10
YT +PD P
Sbjct: 95 YTLIPDMMMP 104


>sp|Y1756_METM5|UNCHARACTERIZED solute-binding protein MmarC5_1756|Methanococcus maripaludis

Query: 1 YTFLPDNFSP 10
YT +PD P
Sbjct: 98 YTLIPDMMMP 107


>sp|MBHLB_PYRFU|MEMBRANE-BOUND hydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FLPDNF 8
FLPD+F
Sbjct: 135 FLPDDF 140




9|Sequence|41|50|DNFSPAKPKP

>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DNFSPAKPKP 10
DNF+P K P
Sbjct: 693 DNFNPTKVNP 702


>sp|CCA_HALSA|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 700922

Query: 1 DNFSPAKPKP 10
D F+PA P P
Sbjct: 261 DAFTPASPAP 270


>sp|CCA_HALS3|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 29341

Query: 1 DNFSPAKPKP 10
D F+PA P P
Sbjct: 261 DAFTPASPAP 270


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 PAKPKP 10
PAKP+P
Sbjct: 511 PAKPRP 516


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DNFSPAKPKP 10
DNF P K P
Sbjct: 693 DNFDPRKLNP 702


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 SPAKPKP 10
SP KP P
Sbjct: 504 SPTKPSP 510


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DNFSPA 6
DNF+PA
Sbjct: 279 DNFTPA 284


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DNFSPA 6
DNF+PA
Sbjct: 287 DNFTPA 292


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 DNFSPA 6
DNF+PA
Sbjct: 287 DNFTPA 292


>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DNFSPA 6
DNF+PA
Sbjct: 287 DNFTPA 292


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DNFSPA 6
DNF+PA
Sbjct: 287 DNFTPA 292


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DNFSPA 6
DNF+PA
Sbjct: 287 DNFTPA 292


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DNFSPA 6
DNF+PA
Sbjct: 287 DNFTPA 292


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DNFSPAK 7
DNF P K
Sbjct: 664 DNFEPVK 670


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DNFSPAK 7
DNF P K
Sbjct: 664 DNFEPVK 670


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 DNFSPAKPK 9
D F PAK K
Sbjct: 1642 DEFDPAKHK 1650


>sp|NADM_SACS2|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DNFSPAKPKP 10
DN+S PKP
Sbjct: 141 DNWSELVPKP 150


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DNFSPAKPKP 10
DNF A KP
Sbjct: 97 DNFGTAPTKP 106


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 1 DNFSPAKPK 9
D F PAK K
Sbjct: 718 DEFDPAKHK 726




10|Sequence|46|55|AKPKPSKDLK

>sp|Y1488_METJA|UNCHARACTERIZED protein MJ1488|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AKPKPSKDLK 10
+KPKPSK +K
Sbjct: 245 SKPKPSKGIK 254


>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AKPKPSKDL 9
+KP+P +DL
Sbjct: 166 SKPEPDQDL 174


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 2 KPKPSKDLK 10
KPKP+++++
Sbjct: 287 KPKPNREIR 295


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 AKPKPSKDL 9
A+P+PS+D+
Sbjct: 217 AEPEPSEDV 225


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 2 KPKPSK 7
KP+PSK
Sbjct: 195 KPRPSK 200


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 2 KPKPSK 7
KP+PSK
Sbjct: 195 KPRPSK 200


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 2 KPKPSK 7
KP+PSK
Sbjct: 195 KPRPSK 200


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KPSKDLK 10
KP+KD+K
Sbjct: 334 KPTKDIK 340


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 2 KPKPSK 7
KP+PSK
Sbjct: 195 KPRPSK 200




11|Sequence|51|60|SKDLKPLLGS

>sp|Y1081_METJA|UPF0047 protein MJ1081|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KDLKPLLGS 10
KD KPLLG+
Sbjct: 105 KDGKPLLGT 113


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SKDLKPLLG 9
SKDL PL+G
Sbjct: 13 SKDLLPLVG 21


>sp|ACDG_METAC|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 SKDLKPLL 8
+KDLKPLL
Sbjct: 180 AKDLKPLL 187


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KDLKPLL 8
KDLKP+L
Sbjct: 1236 KDLKPVL 1242


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 2 KDLKPLLGS 10
K+++P LGS
Sbjct: 91 KEIRPFLGS 99


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 DLKPLLGS 10
D++P LGS
Sbjct: 92 DIRPFLGS 99


>sp|K6PF_PYRHO|ADP-SPECIFIC phosphofructokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KDLKPLLG 9
+D+KP LG
Sbjct: 202 EDIKPFLG 209


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 1 SKDLKPLLG 9
SKDL LLG
Sbjct: 94 SKDLDELLG 102


>sp|Y836_ARCFU|UNCHARACTERIZED protein AF_0836|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SKDLKPLLGS 10
SKDL PL+ S
Sbjct: 51 SKDLSPLVYS 60


>sp|PGK2_METVS|2-PHOSPHOGLYCERATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SKDLKPLL 8
SKDL P+L
Sbjct: 139 SKDLVPML 146


>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 SKDLKPLL 8
SKDL P+L
Sbjct: 139 SKDLVPML 146


>sp|PGK2_METM5|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 SKDLKPLL 8
SKDL P+L
Sbjct: 139 SKDLVPML 146


>sp|PGK2_METMP|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SKDLKPLL 8
SKDL P+L
Sbjct: 138 SKDLVPML 145


>sp|PGK2_METM6|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 SKDLKPLL 8
SKDL P+L
Sbjct: 139 SKDLVPML 146


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SKDLKPL 7
+KD+KPL
Sbjct: 155 TKDIKPL 161


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SKDLKPL 7
+KD+KPL
Sbjct: 155 TKDIKPL 161


>sp|NPPNK_METJA|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanocaldococcus jannaschii (strain

Query: 2 KDLKPLLG 9
K +KPL+G
Sbjct: 19 KKIKPLIG 26




12|Sequence|56|65|PLLGSAVLGL

>sp|OTC_METMA|ORNITHINE carbamoyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LLGSAVLGL 10
LLGSA++G+
Sbjct: 167 LLGSAIMGM 175


>sp|OTC_METAC|ORNITHINE carbamoyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LLGSAVLGL 10
LLGSA++G+
Sbjct: 167 LLGSAIMGM 175


>sp|OTC_METBF|ORNITHINE carbamoyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LLGSAVLGL 10
LLGSA++G+
Sbjct: 167 LLGSAIVGM 175


>sp|OTC_PICTO|ORNITHINE carbamoyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 LLGSAVLGL 10
LLGS++LG+
Sbjct: 162 LLGSSILGV 170


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC

Query: 1 PLLGSAVLG 9
PL G VLG
Sbjct: 22 PLFGETVLG 30


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 1 PLLGSAVL 8
P LGSAV+
Sbjct: 95 PFLGSAVI 102


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 LGSAVLGL 10
LG+AV+GL
Sbjct: 208 LGAAVMGL 215


>sp|SECF_METKA|PROTEIN-EXPORT membrane protein SecF|Methanopyrus kandleri (strain AV19 /

Query: 1 PLLGSAVLG 9
PLL +AVLG
Sbjct: 144 PLLSAAVLG 152


>sp|OTCC_THEVO|ORNITHINE carbamoyltransferase, catabolic|Thermoplasma volcanium (strain ATCC

Query: 2 LLGSAVLGL 10
+LG+A+LG+
Sbjct: 165 MLGAAILGV 173


>sp|IF6_METAR|TRANSLATION initiation factor 6|Methanocella arvoryzae (strain DSM 22066

Query: 1 PLLGSAVL 8
PL+GSA+L
Sbjct: 185 PLVGSAIL 192


>sp|OTCC_THEAC|ORNITHINE carbamoyltransferase, catabolic|Thermoplasma acidophilum (strain

Query: 2 LLGSAVLG 9
+LG+A+LG
Sbjct: 165 MLGAAILG 172


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PLLGSAVL 8
P LGSAV+
Sbjct: 95 PFLGSAVI 102




13|Sequence|61|70|AVLGLLLVLA

>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 1 AVLGLLLVLA 10
A LG+LLVLA
Sbjct: 10 ATLGILLVLA 19


>sp|Y954_METVS|UNCHARACTERIZED solute-binding protein Mevan_0954|Methanococcus vannielii (strain

Query: 2 VLGLLLVLA 10
++GLLLVL+
Sbjct: 1 MIGLLLVLS 9




14|Sequence|66|75|LLVLAAVVAW

>sp|UPP_HALMA|URACIL phosphoribosyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LLVLAAVVA 9
LLVLAAV A
Sbjct: 171 LLVLAAVSA 179


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 3 VLAAVVAW 10
VLA V+AW
Sbjct: 283 VLALVLAW 290




15|Sequence|71|80|AVVAWCYYSV

>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 VAWCYYS 9
V WCY++
Sbjct: 97 VKWCYFA 103


>sp|UPPS_METMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 2 VVAWCY 7
V+ WCY
Sbjct: 62 VIEWCY 67


>sp|UPPS_METAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 2 VVAWCY 7
V+ WCY
Sbjct: 62 VIEWCY 67


>sp|CYDE_METMP|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AVVAWCYY 8
AV+ CYY
Sbjct: 297 AVIGLCYY 304


>sp|CYDE_METM7|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C7 /

Query: 1 AVVAWCYY 8
AV+ CYY
Sbjct: 298 AVIGLCYY 305


>sp|CYDE_METM6|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C6 /

Query: 1 AVVAWCYY 8
AV+ CYY
Sbjct: 298 AVIGLCYY 305


>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 2 VVAWC 6
VVAWC
Sbjct: 281 VVAWC 285


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 VAWCYYSV 10
V W +YSV
Sbjct: 753 VQWAFYSV 760


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 WCYYS 9
WCY++
Sbjct: 99 WCYFA 103


>sp|SYH_METMJ|HISTIDINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 WCYYS 9
WCY++
Sbjct: 99 WCYFA 103


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 5 WCYYS 9
WCY++
Sbjct: 99 WCYFA 103


>sp|Y992_IGNH4|MEMO1 family protein Igni_0992|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VVAWCYY 8
V AW YY
Sbjct: 64 VAAWSYY 70


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 AVVAWC 6
AVV WC
Sbjct: 423 AVVHWC 428


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 VAWCYYSV 10
V W +YS+
Sbjct: 753 VQWAFYSI 760


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VAWCYYSV 10
V W +YS+
Sbjct: 753 VQWAFYSI 760


>sp|NIFB_METJA|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus jannaschii

Query: 2 VVAWCYY 8
+V W YY
Sbjct: 156 IVEWVYY 162


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 5 WCYYSV 10
W YYS+
Sbjct: 511 WLYYSI 516


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AVVAWC 6
AVV WC
Sbjct: 422 AVVHWC 427




16|Sequence|76|85|CYYSVSLRKA

>sp|RL31_PICTO|LARGE ribosomal subunit protein eL31|Picrophilus torridus (strain ATCC

Query: 4 SVSLRKA 10
SVSLRKA
Sbjct: 13 SVSLRKA 19


>sp|DGGGP_IGNH4|DIGERANYLGERANYLGLYCERYL phosphate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 YYSVSLRK 9
YYS SL+K
Sbjct: 120 YYSKSLKK 127


>sp|Y1036_METJA|UNCHARACTERIZED protein MJ1036|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YYSVSLR 8
YYSVSL+
Sbjct: 27 YYSVSLK 33


>sp|PYRK_ARCFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Archaeoglobus fulgidus

Query: 2 YYSVSLR 8
Y+S+SLR
Sbjct: 20 YFSISLR 26




17|Sequence|81|90|SLRKAERLRA

>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 3 RKAERLRA 10
RKAER+R
Sbjct: 16 RKAERIRG 23


>sp|HEM3_PYRCJ|PROBABLE porphobilinogen deaminase|Pyrobaculum calidifontis (strain DSM

Query: 1 SLRKAERLRA 10
S+R+AE LRA
Sbjct: 126 SVRRAEFLRA 135




18|Sequence|86|95|ERLRAELLDL

>sp|ARLY_HALSA|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 700922

Query: 2 RLRAELLD 9
RLRA+LLD
Sbjct: 118 RLRADLLD 125


>sp|ARLY_HALS3|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 29341

Query: 2 RLRAELLD 9
RLRA+LLD
Sbjct: 118 RLRADLLD 125


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LRAELLDL 10
LRAEL+DL
Sbjct: 485 LRAELIDL 492


>sp|MDH_METST|MALATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ERLRAELLDL 10
ER++ E+LD+
Sbjct: 40 ERVKGEILDM 49


>sp|RL18_SACI7|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 ERLRAELLDL 10
E+L++E LDL
Sbjct: 153 EKLKSENLDL 162


>sp|RL18_SACI6|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 ERLRAELLDL 10
E+L++E LDL
Sbjct: 153 EKLKSENLDL 162


>sp|RL18_SACI4|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 ERLRAELLDL 10
E+L++E LDL
Sbjct: 153 EKLKSENLDL 162


>sp|RL18_SACI3|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 ERLRAELLDL 10
E+L++E LDL
Sbjct: 153 EKLKSENLDL 162


>sp|RL18_SACI2|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 ERLRAELLDL 10
E+L++E LDL
Sbjct: 153 EKLKSENLDL 162


>sp|RL18_SACI1|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 ERLRAELLDL 10
E+L++E LDL
Sbjct: 153 EKLKSENLDL 162


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 ERLRAELLD 9
E+L AE+LD
Sbjct: 85 EKLGAEILD 93


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ERLRAELLD 9
ERLR+ L+D
Sbjct: 851 ERLRSVLMD 859


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ERLRAELLD 9
ERLR+ L+D
Sbjct: 851 ERLRSVLMD 859


>sp|KTHY_HALMA|PROBABLE thymidylate kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ERLRAELLD 9
ER+RA +LD
Sbjct: 187 ERVRAAILD 195


>sp|GCH3_METST|GTP cyclohydrolase III|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ERLRAELLD 9
E +RAEL+D
Sbjct: 235 EDIRAELVD 243


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 1 ERLRAELLD 9
ER+ A LLD
Sbjct: 157 ERIHARLLD 165




19|Sequence|91|100|ELLDLKAGGF

>sp|SYY_METLZ|TYROSINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ELLDLKAGGF 10
+L+D+KA GF
Sbjct: 51 KLMDMKAAGF 60


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 1 ELLDLKAGGF 10
ELL LK GGF
Sbjct: 192 ELLILKYGGF 201


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 1 ELLDLKAGGF 10
ELL LK GGF
Sbjct: 192 ELLILKYGGF 201


>sp|RFCS_METMJ|REPLICATION factor C small subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ELLDLKAGG 9
ELLDL GG
Sbjct: 234 ELLDLSIGG 242


>sp|RNZ_AERPE|RIBONUCLEASE Z|Aeropyrum pernix (strain ATCC 700893

Query: 1 ELLDLKAG 8
E LDLKAG
Sbjct: 169 ERLDLKAG 176


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LLDLKAGGF 10
+ DLKA GF
Sbjct: 316 IADLKAAGF 324


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 DLKAGGF 10
DLKA GF
Sbjct: 318 DLKAAGF 324


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ELLDLKAGG 9
+LLDLKA G
Sbjct: 302 DLLDLKASG 310


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 5 LKAGGF 10
LKAGGF
Sbjct: 353 LKAGGF 358


>sp|PIMT_METJA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ELLDLKAG 8
ELLDLK G
Sbjct: 71 ELLDLKPG 78


>sp|PIMT2_ARCFU|PROTEIN-L-ISOASPARTATE O-methyltransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELLDLKAG 8
ELLDL+ G
Sbjct: 70 ELLDLREG 77


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ELLDLKAGGF 10
+LLDL+ GF
Sbjct: 52 KLLDLQKAGF 61


>sp|PIMT1_ARCFU|PROTEIN-L-ISOASPARTATE O-methyltransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELLDLKAG 8
ELLDL+ G
Sbjct: 70 ELLDLREG 77


>sp|PCNA_METMA|DNA polymerase sliding clamp|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ELLDLKAG 8
+L+DLKAG
Sbjct: 180 QLIDLKAG 187


>sp|CCA_HALLT|CCA-ADDING enzyme|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ELLDLKAGGF 10
ELL L+ GGF
Sbjct: 184 ELLVLELGGF 193


>sp|PCNA_METBF|DNA polymerase sliding clamp|Methanosarcina barkeri (strain Fusaro /

Query: 1 ELLDLKAG 8
+L+DLKAG
Sbjct: 180 QLIDLKAG 187


>sp|PCNA_METAC|DNA polymerase sliding clamp|Methanosarcina acetivorans (strain ATCC

Query: 1 ELLDLKAG 8
+L+DLKAG
Sbjct: 180 QLIDLKAG 187


>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ELLDLKAGG 9
ELLD GG
Sbjct: 292 ELLDFSEGG 300


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain

Query: 2 LLDLKAG 8
+LDLKAG
Sbjct: 57 VLDLKAG 63


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 ELLDLKAG 8
E++DLK G
Sbjct: 461 EMIDLKTG 468


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 ELLDLKAG 8
E+LD KAG
Sbjct: 6 EILDAKAG 13


>sp|KORC_METTM|2-OXOGLUTARATE synthase subunit KorC|Methanothermobacter marburgensis (strain

Query: 4 DLKAGG 9
DLKAGG
Sbjct: 85 DLKAGG 90


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 1 ELLDLKAGGF 10
ELL L+ GGF
Sbjct: 185 ELLVLEFGGF 194


>sp|PCNA_METTP|DNA polymerase sliding clamp|Methanothrix thermoacetophila (strain DSM

Query: 1 ELLDLKAG 8
ELLD+K G
Sbjct: 180 ELLDMKPG 187


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ELLDLKAGG 9
E+LD AGG
Sbjct: 6 EILDKDAGG 14


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ELLDLKAGG 9
E+LD AGG
Sbjct: 6 EILDKDAGG 14




20|Sequence|96|105|KAGGFSIRNQ

>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KAGGFSIRN 9
+AG F+IRN
Sbjct: 375 EAGMFAIRN 383


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 KAGGFSIR 8
+AGGF +R
Sbjct: 318 RAGGFRLR 325


>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGFSIRN 9
GGF+I+N
Sbjct: 124 GGFNIKN 130


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 1 KAGGFSIR 8
K+GGF +R
Sbjct: 341 KSGGFRLR 348


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 KAGGFSIRN 9
+AG F++RN
Sbjct: 277 RAGVFAVRN 285


>sp|RS11_METMP|SMALL ribosomal subunit protein uS11|Methanococcus maripaludis (strain

Query: 2 AGGFSIRNQ 10
+GG +RNQ
Sbjct: 34 SGGMIVRNQ 42


>sp|RS11_METM7|SMALL ribosomal subunit protein uS11|Methanococcus maripaludis (strain

Query: 2 AGGFSIRNQ 10
+GG +RNQ
Sbjct: 34 SGGMIVRNQ 42


>sp|RS11_METM5|SMALL ribosomal subunit protein uS11|Methanococcus maripaludis (strain

Query: 2 AGGFSIRNQ 10
+GG +RNQ
Sbjct: 34 SGGMIVRNQ 42


>sp|RS11_METVS|SMALL ribosomal subunit protein uS11|Methanococcus vannielii (strain

Query: 2 AGGFSIRNQ 10
+GG +RNQ
Sbjct: 34 SGGMIVRNQ 42


>sp|PUS10_CALMQ|TRNA pseudouridine synthase Pus10|Caldivirga maquilingensis (strain ATCC

Query: 3 GGFSIR 8
GGFS+R
Sbjct: 364 GGFSVR 369




21|Sequence|101|110|SIRNQKGEQV

>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 SIRNQKGEQV 10
S+R + GE+V
Sbjct: 46 SVRGETGEEV 55


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SIRNQKGE 8
++RN+KGE
Sbjct: 211 AVRNEKGE 218


>sp|Y689_ARCFU|UNCHARACTERIZED protein AF_0689|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IRNQKGEQV 10
IRN++GE++
Sbjct: 82 IRNEEGEEI 90




22|Sequence|106|115|KGEQVFRLAF

>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGEQVFRLA 9
K E++FR+A
Sbjct: 328 KSEEIFRMA 336


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KGEQVFRL 8
+GE+V+RL
Sbjct: 444 RGERVYRL 451


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KGEQVFRL 8
+GE+V+RL
Sbjct: 444 RGERVYRL 451


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 EQVFRLAF 10
+Q+F LAF
Sbjct: 597 DQIFELAF 604




23|Sequence|111|120|FRLAFRSGAL

>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 FRLAFRSGAL 10
FRLA R G L
Sbjct: 570 FRLAMREGPL 579


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 FRLAFRSGAL 10
FRLA R G L
Sbjct: 570 FRLAMREGPL 579


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 FRLAFRSGAL 10
+RLA +SG L
Sbjct: 280 YRLALKSGRL 289


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 FRLAFRSGAL 10
+RLA R G L
Sbjct: 571 YRLAMREGPL 580


>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM 5456

Query: 2 RLAFRSGAL 10
RLA R GA+
Sbjct: 241 RLALRDGAI 249


>sp|HPPA2_METMA|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina mazei (strain

Query: 1 FRLAFRSGAL 10
++AFR GA+
Sbjct: 120 LKIAFRGGAV 129




24|Sequence|116|125|RSGALDLDSC

>sp|Y049_PYRAE|UNCHARACTERIZED serpin-like protein PAE0049|Pyrobaculum aerophilum (strain ATCC

Query: 4 ALDLDSC 10
ALDL SC
Sbjct: 191 ALDLSSC 197


>sp|UREG_CENSY|UREASE accessory protein UreG|Cenarchaeum symbiosum (strain A)

Query: 1 RSGALDLDSC 10
R G L ++SC
Sbjct: 139 RKGGLGIESC 148


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GALDLD 8
GALDLD
Sbjct: 73 GALDLD 78


>sp|METE_METTM|METHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 SGALDLD 8
SGALD+D
Sbjct: 191 SGALDVD 197




25|Sequence|121|130|DLDSCSRDGA

>sp|SYFA_METBF|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 DLDSCSRDGA 10
D+DSC GA
Sbjct: 310 DIDSCGWGGA 319


>sp|HDRD_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina acetivorans

Query: 1 DLDSCSRDG 9
+LDSC+R G
Sbjct: 20 ELDSCTRCG 28


>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 1 DLDSCSRDG 9
+LDSC+R G
Sbjct: 20 ELDSCTRCG 28


>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus

Query: 1 DLDSCSRDG 9
D +SC+R+G
Sbjct: 73 DGESCAREG 81


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DSCSRDG 9
D CSR+G
Sbjct: 247 DYCSREG 253


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DLDSCSRDG 9
DLDS R G
Sbjct: 128 DLDSVGRSG 136


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DLDSCSRDG 9
DLDS R G
Sbjct: 129 DLDSVGRSG 137


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLDSCSRDG 9
DLDS R G
Sbjct: 129 DLDSVGRSG 137


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 DLDSCSRDG 9
DLDS R G
Sbjct: 128 DLDSVGRSG 136


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DLDSCSRDG 9
DLDS R G
Sbjct: 129 DLDSVGRSG 137


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LDSCSRDG 9
+D+C R+G
Sbjct: 198 VDNCGREG 205


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DLDSCSRDG 9
DLDS R G
Sbjct: 129 DLDSVGRSG 137


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DLDSCSRDG 9
DLDS R G
Sbjct: 128 DLDSVGRSG 136




26|Sequence|126|135|SRDGALLGCS

>sp|HIS4_PYRFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrococcus furiosus (strain ATCC

Query: 2 RDGALLG 8
RDG LLG
Sbjct: 167 RDGTLLG 173


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 GALLGC 9
GALLGC
Sbjct: 102 GALLGC 107


>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix

Query: 4 GALLGCS 10
G+LLGCS
Sbjct: 76 GSLLGCS 82




27|Sequence|131|140|LLGCSLTADG

>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 4 CSLTADG 10
CSLTADG
Sbjct: 98 CSLTADG 104


>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus acidocaldarius

Query: 3 GCSLTADG 10
GCSL DG
Sbjct: 122 GCSLVVDG 129


>sp|SPSS2_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LLGCSLTAD 9
+LGCSL D
Sbjct: 259 ILGCSLMGD 267


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 4 CSLTADG 10
CSLT DG
Sbjct: 389 CSLTVDG 395


>sp|SFSA_THEVO|SUGAR fermentation stimulation protein homolog|Thermoplasma volcanium

Query: 3 GCSLTADG 10
GC+L+ DG
Sbjct: 116 GCTLSIDG 123


>sp|SFSA_THEAC|SUGAR fermentation stimulation protein homolog|Thermoplasma acidophilum

Query: 3 GCSLTADG 10
GC+L A+G
Sbjct: 116 GCTLMANG 123


>sp|SFSA_SULTO|SUGAR fermentation stimulation protein homolog|Sulfurisphaera tokodaii

Query: 3 GCSLTADG 10
GC+L DG
Sbjct: 117 GCTLARDG 124


>sp|Y1442_METJA|UNCHARACTERIZED protein MJ1442|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLGCSLTADG 10
+LGC +T G
Sbjct: 27 VLGCGITISG 36


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 4 CSLTADG 10
C +TADG
Sbjct: 73 CGITADG 79


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC

Query: 4 CSLTADG 10
C +TADG
Sbjct: 73 CGITADG 79


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 1 LLGCSLTA 8
LLG SLTA
Sbjct: 281 LLGLSLTA 288


>sp|NRPR2_METMA|GLOBAL nitrogen regulator NrpRII|Methanosarcina mazei (strain ATCC

Query: 4 CSLTADG 10
CS+T DG
Sbjct: 91 CSITIDG 97


>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 CSLTADG 10
CS+ ADG
Sbjct: 173 CSILADG 179


>sp|DHQS_METB6|3-DEHYDROQUINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 4 CSLTADG 10
CS+ ADG
Sbjct: 173 CSMLADG 179




28|Sequence|136|145|LTADGLPLHF

>sp|CAS1_METTH|CRISPR-ASSOCIATED endonuclease Cas1|Methanothermobacter thermautotrophicus (strain

Query: 1 LTADGLPLHF 10
L+ +G+P+HF
Sbjct: 68 LSKEGIPIHF 77


>sp|Y27A_AERPE|UPF0175 protein APE_0276a|Aeropyrum pernix (strain ATCC 700893

Query: 1 LTADGLPLHF 10
L +G+PLH+
Sbjct: 62 LAREGIPLHY 71


>sp|CARA_PYRFU|CARBAMOYL phosphate synthase small chain|Pyrococcus furiosus (strain ATCC

Query: 1 LTADGLPLHF 10
L GLPLH+
Sbjct: 72 LKEHGLPLHY 81


>sp|IDI2_META3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LTADGLPLHF 10
+ ADG+ +HF
Sbjct: 147 IDADGMAIHF 156


>sp|Y1226_ARCFU|UNCHARACTERIZED protein AF_1226|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTADGLPL 8
LT DGLP+
Sbjct: 83 LTPDGLPI 90


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LTADGLPLH 9
+TADG P H
Sbjct: 431 ITADGNPTH 439


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LTADGLPLHF 10
L G+P+HF
Sbjct: 56 LAQKGIPVHF 65


>sp|CAS1A_METRM|CRISPR-ASSOCIATED protein Cas1 1|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 4 DGLPLHF 10
+G+P+HF
Sbjct: 59 EGIPIHF 65


>sp|COFD_METLZ|2-PHOSPHO-L-LACTATE transferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 TADGLPL 8
T DGLPL
Sbjct: 169 TTDGLPL 175


>sp|Y1731_ARCFU|UNCHARACTERIZED protein AF_1731|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTADGLP 7
LT DGLP
Sbjct: 36 LTVDGLP 42


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 4 DGLPLH 9
DG+PLH
Sbjct: 451 DGVPLH 456


>sp|Y207_AERPE|UPF0148 protein APE_0207|Aeropyrum pernix (strain ATCC 700893

Query: 3 ADGLPL 8
ADGLPL
Sbjct: 32 ADGLPL 37


>sp|QUEC_PYRFU|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LTADGLPLH 9
T DG P+H
Sbjct: 201 FTEDGRPIH 209


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LTADGLPLH 9
+TADG P H
Sbjct: 431 ITADGNPNH 439


>sp|QUEC_THEKO|7-CYANO-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LTADGLPLH 9
T DG P+H
Sbjct: 200 FTEDGKPIH 208


>sp|QUEC_PYRHO|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LTADGLPLH 9
T DG P+H
Sbjct: 200 FTEDGKPIH 208


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 LTADGLPLH 9
T DG P+H
Sbjct: 200 FTEDGKPIH 208


>sp|MTXX_METMA|PUTATIVE methyltransferase mtx subunit X|Methanosarcina mazei (strain ATCC

Query: 1 LTADGLPL 8
LTADG P
Sbjct: 115 LTADGTPF 122


>sp|KHSE_PICTO|HOMOSERINE kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 LTADGLPLHF 10
++ DG+PL +
Sbjct: 42 ISGDGIPLDY 51


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TADGLPLHF 10
TA+ L LHF
Sbjct: 117 TAEKLALHF 125


>sp|Y1435_PYRAB|UNCHARACTERIZED protein PYRAB14350|Pyrococcus abyssi (strain GE5 /

Query: 2 TADGLPLHF 10
TA+ L LHF
Sbjct: 117 TAEKLALHF 125


>sp|GGGPS_METS5|GERANYLGERANYLGLYCERYL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LTADGLPLHF 10
L +G P+HF
Sbjct: 14 LIDEGQPIHF 23


>sp|PRIL_HALSA|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 3 ADGLPL 8
ADGLPL
Sbjct: 191 ADGLPL 196


>sp|PRIL_HALS3|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 3 ADGLPL 8
ADGLPL
Sbjct: 191 ADGLPL 196


>sp|AROD_METB6|3-DEHYDROQUINATE dehydratase|Methanoregula boonei (strain DSM 21154

Query: 2 TADGLPLH 9
TA+ LPLH
Sbjct: 110 TAEMLPLH 117


>sp|RADA_METLZ|DNA repair and recombination protein|Methanocorpusculum labreanum

Query: 1 LTADGLPLHF 10
LTA GLP+
Sbjct: 204 LTASGLPVKL 213


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTADGLPLH 9
L ADG+ LH
Sbjct: 563 LEADGVVLH 571


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 LTADGLPLHF 10
LT D L HF
Sbjct: 228 LTVDSLTAHF 237


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 LTADGLPLHF 10
LT D L HF
Sbjct: 228 LTVDSLTAHF 237




29|Sequence|141|150|LPLHFFIQTV

>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 LPLHFFIQTV 10
+ LH FIQ+V
Sbjct: 484 MDLHVFIQSV 493


>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPLHFFIQ 8
LPLHF +
Sbjct: 103 LPLHFMFE 110


>sp|CAS1_METTH|CRISPR-ASSOCIATED endonuclease Cas1|Methanothermobacter thermautotrophicus (strain

Query: 1 LPLHFF 6
+P+HFF
Sbjct: 73 IPIHFF 78


>sp|CAS1_NANEQ|CRISPR-ASSOCIATED endonuclease Cas1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LPLHFFIQ 8
+P+HFF +
Sbjct: 60 IPIHFFYE 67


>sp|CAS1A_METRM|CRISPR-ASSOCIATED protein Cas1 1|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 LPLHFF 6
+P+HFF
Sbjct: 61 IPIHFF 66




30|Sequence|146|155|FIQTVRPKDT

>sp|GCH1L_METJA|GTP cyclohydrolase 1 type 2|Methanocaldococcus jannaschii (strain

Query: 1 FIQTVRPKD 9
FI+T PKD
Sbjct: 9 FIETFAPKD 17


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FIQTVRPKDT 10
F+Q++ PK+T
Sbjct: 144 FLQSMDPKNT 153


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 1 FIQTVRPK 8
F+Q +RPK
Sbjct: 597 FVQKLRPK 604


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 FIQTVRPKDT 10
F+QT R K+T
Sbjct: 1291 FLQTSRQKNT 1300


>sp|EF1A_THECE|ELONGATION factor 1-alpha|Thermococcus celer

Query: 5 VRPKDT 10
VRPKDT
Sbjct: 317 VRPKDT 322


>sp|EF1A_THEGJ|ELONGATION factor 1-alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 5 VRPKDT 10
VRPKDT
Sbjct: 317 VRPKDT 322


>sp|EF1A_THEKO|ELONGATION factor 1-alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 VRPKDT 10
VRPKDT
Sbjct: 317 VRPKDT 322


>sp|EF1A_THEON|ELONGATION factor 1-alpha|Thermococcus onnurineus (strain NA1)

Query: 5 VRPKDT 10
VRPKDT
Sbjct: 317 VRPKDT 322


>sp|IF2G_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 IQTVRPKDT 10
++ +RPK+T
Sbjct: 343 VEPIRPKET 351


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 FIQTVRPKD 9
FI+T+R +D
Sbjct: 157 FIETIRRQD 165


>sp|UPP_THEGJ|URACIL phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 IQTVRPKDT 10
I TV+P DT
Sbjct: 127 IPTVKPDDT 135




31|Sequence|151|160|RPKDTVMCYR

>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RPKDTVMCYR 10
+P +TV+C+R
Sbjct: 324 QPGETVLCFR 333


>sp|HISX_METTH|HISTIDINOL dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RPKDTVMCY 9
RP D+V CY
Sbjct: 117 RPIDSVGCY 125


>sp|NIFH1_METTL|NITROGENASE iron protein 1|Methanothermococcus thermolithotrophicus

Query: 1 RPKDTVM 7
+P+DTVM
Sbjct: 61 KPQDTVM 67


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 KDTVMCY 9
KDTVM Y
Sbjct: 2 KDTVMAY 8


>sp|IF2G_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 RPKDTVM 7
RPK+T+M
Sbjct: 347 RPKETLM 353


>sp|NFI_THEAC|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma acidophilum (strain

Query: 4 DTVMCYR 10
DT+ CYR
Sbjct: 62 DTIPCYR 68


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 KDTVMCY 9
KDTVM Y
Sbjct: 2 KDTVMAY 8


>sp|Y337_METJA|UNCHARACTERIZED protein MJ0337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKDTVMCYR 10
P D + C+R
Sbjct: 168 PVDAIACFR 176


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 KDTVMCY 9
KDTVM Y
Sbjct: 2 KDTVMAY 8


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 KDTVMCY 9
KDTVM Y
Sbjct: 2 KDTVMVY 8


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 KDTVMCY 9
KDTVM Y
Sbjct: 2 KDTVMTY 8


>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 1 RPKDTVMC 8
+P D VMC
Sbjct: 233 KPMDGVMC 240




32|Sequence|156|165|VMCYRVRWEE

>sp|COFC_METBF|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 CYRVRW 8
CYRVR+
Sbjct: 133 CYRVRY 138


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 2 MCYRVRWE 9
MCY VR E
Sbjct: 310 MCYEVRPE 317


>sp|AGOG_AERPE|N-GLYCOSYLASE/DNA lyase|Aeropyrum pernix (strain ATCC 700893

Query: 2 MCYRVRWE 9
M RVRWE
Sbjct: 1 MAQRVRWE 8


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VMCYRVRWEE 10
+M Y RW E
Sbjct: 318 LMAYEKRWRE 327


>sp|DCD_DESA1|DCTP deaminase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 CYRVR 7
CYRVR
Sbjct: 63 CYRVR 67


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 2 MCYRVRWEE 10
MC++ WE+
Sbjct: 18 MCFKQHWED 26


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 MCYRVRWE 9
MC R +WE
Sbjct: 234 MCTRAQWE 241


>sp|FEN_METS3|FLAP endonuclease 1|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 YRVRWEE 10
Y++RW++
Sbjct: 279 YKIRWKK 285


>sp|BAX1_ARCFU|ENDONUCLEASE Bax1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YRVRW 8
YRVRW
Sbjct: 452 YRVRW 456


>sp|CDPAS_PYRAB|CDP-ARCHAEOL synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VMCYRVRWE 9
V YR++W+
Sbjct: 156 VFAYRMKWK 164


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain

Query: 3 CYRVRWE 9
CY V W+
Sbjct: 17 CYTVDWD 23


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 4 YRVRWEE 10
YR RW E
Sbjct: 446 YRTRWNE 452




33|Sequence|161|170|VRWEEAAPGR

>sp|UPP_THEKO|URACIL phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 VRWEEAAPG 9
+R+E+ APG
Sbjct: 220 IRFEDGAPG 228


>sp|ACTH_THEAC|ARCHAEAL actin homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RWEEAAPG 9
R+EE APG
Sbjct: 293 RFEEIAPG 300


>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RWEEAAPG 9
+WEE PG
Sbjct: 180 QWEEPVPG 187


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RWEEA 6
RWEEA
Sbjct: 433 RWEEA 437


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 3 WEEAAPG 9
W++A PG
Sbjct: 277 WDQAVPG 283


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RWEEA 6
RWEEA
Sbjct: 419 RWEEA 423


>sp|RL6_THEVO|LARGE ribosomal subunit protein uL6|Thermoplasma volcanium (strain

Query: 1 VRWEEAA 7
++WEEA+
Sbjct: 2 IKWEEAS 8


>sp|AROD_THEON|3-DEHYDROQUINATE dehydratase|Thermococcus onnurineus (strain NA1)

Query: 4 EEAAPGR 10
EEAAPG+
Sbjct: 192 EEAAPGQ 198


>sp|TRMY_METTP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanothrix

Query: 3 WEEAAPG 9
W E+ PG
Sbjct: 98 WRESTPG 104


>sp|SECG_METKA|PREPROTEIN translocase subunit SecG|Methanopyrus kandleri (strain AV19 /

Query: 3 WEEAAPG 9
W+E APG
Sbjct: 23 WDEEAPG 29


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VRWEEAAP 8
V W EA P
Sbjct: 42 VAWNEAGP 49


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum (strain

Query: 1 VRWEEAAPGR 10
VRW+ PG+
Sbjct: 242 VRWQVPMPGQ 251


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RWEEA 6
RWEEA
Sbjct: 17 RWEEA 21




34|Sequence|166|175|AAPGRAVEHA

>sp|Y1593_PYRAB|PROTEIN PYRAB15930|Pyrococcus abyssi (strain GE5 /

Query: 1 AAPGRAVEH 9
AAPG +EH
Sbjct: 141 AAPGAFIEH 149


>sp|RPO3_METKA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanopyrus kandleri (strain AV19 /

Query: 1 AAPGRAVEHA 10
A PG +EHA
Sbjct: 147 AVPGLGLEHA 156


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGRAVEH 9
PG+ VEH
Sbjct: 921 PGKYVEH 927


>sp|RPO3_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AAPGRAVEHA 10
A GRA EHA
Sbjct: 143 AKLGRAKEHA 152


>sp|GSA_NITMS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 APGRAVEH 9
APG A EH
Sbjct: 241 APGGAQEH 248


>sp|LYSW_SACS2|ALPHA-AMINOADIPATE/GLUTAMATE carrier protein LysW|Saccharolobus solfataricus (strain ATCC

Query: 1 AAPGRAVEH 9
A PG VEH
Sbjct: 19 ALPGELVEH 27


>sp|Y1472_THEKO|PROTEIN TK1472|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AAPGRAVEH 9
AAPG +EH
Sbjct: 141 AAPGAFIEH 149


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 3 PGRAVEH 9
P RAVEH
Sbjct: 182 PERAVEH 188


>sp|LYSW_SULTO|ALPHA-AMINOADIPATE/GLUTAMATE carrier protein LysW|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AAPGRAVEH 9
A PG VEH
Sbjct: 19 ALPGEIVEH 27


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AAPGRAVEHA 10
+P R V+HA
Sbjct: 276 GSPSRTVKHA 285


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AAPGRAVEH 9
AAP + +EH
Sbjct: 144 AAPKKEIEH 152


>sp|ILVC_PYRNV|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum neutrophilum (strain DSM

Query: 2 APGRAV 7
APGRAV
Sbjct: 132 APGRAV 137




35|Sequence|171|180|AVEHAMFLGD

>sp|RISB_PYRNV|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 AVEHAMFLG 9
A+EHA FLG
Sbjct: 23 AIEHARFLG 31


>sp|RISB_PYRAE|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AVEHAMFLG 9
AVEHA FLG
Sbjct: 23 AVEHAKFLG 31


>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 VEHAMFLGD 10
VEHA F+GD
Sbjct: 61 VEHADFIGD 69


>sp|RISB_PYRAR|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 AVEHAMFLG 9
A+EHA FLG
Sbjct: 23 ALEHAKFLG 31


>sp|RPIA_NATPD|RIBOSE-5-PHOSPHATE isomerase A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AVEHAMFLG 9
AVEH +F+G
Sbjct: 201 AVEHGLFVG 209


>sp|RISB_PYRCJ|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 AVEHAMFLG 9
A+EHA FLG
Sbjct: 23 ALEHAKFLG 31


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VEHAMFLGD 10
VEHA F+GD
Sbjct: 61 VEHADFVGD 69


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 VEHAMFLGD 10
VEHA F+GD
Sbjct: 61 VEHADFVGD 69


>sp|RISB_AERPE|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AVEHAMFLG 9
A++HA FLG
Sbjct: 28 AIDHARFLG 36


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 3 EHAMFLGD 10
EHA FLG+
Sbjct: 397 EHASFLGE 404


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 VEHAMFLGD 10
+EHA+ GD
Sbjct: 262 LEHALLFGD 270


>sp|Y812_METJA|UNCHARACTERIZED protein MJ0812|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AVEHAMFLGD 10
A EH +FLG+
Sbjct: 29 ANEHTVFLGN 38


>sp|Y079_METJA|UNCHARACTERIZED protein MJ0079|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AVEHAMFLGD 10
A EH +FLG+
Sbjct: 35 ANEHTVFLGN 44


>sp|RISB_METVS|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 AVEHAMFLG 9
A EHA FLG
Sbjct: 23 AEEHAQFLG 31


>sp|RISB_STAMF|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 AVEHAMFLG 9
A+ HA FLG
Sbjct: 23 AISHARFLG 31


>sp|RPIA_HALSA|RIBOSE-5-PHOSPHATE isomerase A|Halobacterium salinarum (strain ATCC 700922

Query: 2 VEHAMFLG 9
VEH +F+G
Sbjct: 200 VEHGLFVG 207


>sp|RPIA_HALS3|RIBOSE-5-PHOSPHATE isomerase A|Halobacterium salinarum (strain ATCC 29341

Query: 2 VEHAMFLG 9
VEH +F+G
Sbjct: 200 VEHGLFVG 207


>sp|RPIA_HALMA|RIBOSE-5-PHOSPHATE isomerase A|Haloarcula marismortui (strain ATCC 43049

Query: 2 VEHAMFLG 9
VEH +F+G
Sbjct: 201 VEHGLFVG 208


>sp|RISB_METM5|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 AVEHAMFLG 9
A EHA FLG
Sbjct: 23 AEEHAAFLG 31


>sp|RISB_METM7|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 AVEHAMFLG 9
A EHA FLG
Sbjct: 23 AEEHAAFLG 31


>sp|RISB_METM6|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 AVEHAMFLG 9
A EHA FLG
Sbjct: 23 AEEHAAFLG 31


>sp|RPIA_HALLT|RIBOSE-5-PHOSPHATE isomerase A|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 VEHAMFLG 9
VEH +F+G
Sbjct: 215 VEHGIFVG 222


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VEHAMFLGD 10
+EH + LGD
Sbjct: 297 IEHRVILGD 305


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 VEHAMFLG 9
VEHA +LG
Sbjct: 163 VEHAKWLG 170


>sp|RISB_SULTO|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AVEHAMFLG 9
A+ HA FLG
Sbjct: 27 AIAHAKFLG 35


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AVEHAMFLGD 10
AVE+AM L D
Sbjct: 168 AVEYAMTLKD 177


>sp|RISB_METMP|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AVEHAMFLG 9
A EHA FLG
Sbjct: 23 AEEHAEFLG 31


>sp|RISB_METJA|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AVEHAMFLG 9
A EHA FLG
Sbjct: 26 AEEHAEFLG 34


>sp|RISB_META3|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AVEHAMFLG 9
A EHA FLG
Sbjct: 23 ADEHAEFLG 31


>sp|RISB_ARCFU|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EHAMFLG 9
EHA FLG
Sbjct: 27 EHAEFLG 33


>sp|RISB_SULAC|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AVEHAMFLG 9
A+ HA FLG
Sbjct: 30 ALSHAEFLG 38


>sp|RISB_METBF|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 EHAMFLG 9
EHA FLG
Sbjct: 26 EHAEFLG 32


>sp|RISB_METMA|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EHAMFLG 9
EHA FLG
Sbjct: 26 EHAEFLG 32


>sp|RISB_METAC|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EHAMFLG 9
EHA FLG
Sbjct: 26 EHAEFLG 32


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AVEHAMFL 8
A EHA+F+
Sbjct: 665 AAEHALFV 672


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 VEHAMFLGD 10
+EH + LGD
Sbjct: 297 MEHRVILGD 305


>sp|IPYR_HALVD|INORGANIC pyrophosphatase|Haloferax volcanii (strain ATCC 29605

Query: 1 AVEHAMFL 8
A+EHAM L
Sbjct: 164 AIEHAMDL 171


>sp|HUTI_HALMA|IMIDAZOLONEPROPIONASE marismortui (strain ATCC 43049

Query: 4 HAMFLGD 10
HA+F GD
Sbjct: 79 HALFAGD 85


>sp|HUTI_HALSA|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 700922

Query: 4 HAMFLGD 10
HA+F GD
Sbjct: 79 HALFAGD 85


>sp|HUTI_HALS3|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 29341

Query: 4 HAMFLGD 10
HA+F GD
Sbjct: 79 HALFAGD 85




36|Sequence|176|185|MFLGDAAAHW

>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 MFLGDAAAH 9
M +GDAA H
Sbjct: 274 MVVGDAAGH 282


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 1 MFLGDAAAH 9
M +GDAA H
Sbjct: 274 MVVGDAAGH 282


>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 1 MFLGDAAAH 9
M +GDAA H
Sbjct: 274 MVVGDAAGH 282


>sp|Y1954_ARCFU|PUTATIVE amidase AF_1954|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FLGDAAAHW 10
F+GD A W
Sbjct: 306 FIGDRMAEW 314


>sp|VAPC6_METJA|RIBONUCLEASE VapC6|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MFLGDAAAH 9
+F+GD AH
Sbjct: 16 LFIGDEKAH 24


>sp|TRMY_AERPE|TRNA (pseudouridine(54)-N(1))-methyltransferase|Aeropyrum pernix (strain

Query: 4 GDAAAHW 10
GD ++HW
Sbjct: 119 GDISSHW 125


>sp|CAS6L_PYRFU|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6|Pyrococcus

Query: 2 FLGDAAAHW 10
F GD HW
Sbjct: 139 FEGDKLKHW 147


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MFLGDAAAH 9
+ +GDAA H
Sbjct: 263 LLVGDAACH 271


>sp|Y2347_METMJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanoculleus

Query: 1 MFLGDAAAH 9
M LGD A+H
Sbjct: 141 MSLGDLASH 149


>sp|UDGB_PYRAE|TYPE-5 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MFLGDAAAH 9
MF GDA+A
Sbjct: 80 MFTGDASAQ 88


>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LGDAAAH 9
LGDAAA+
Sbjct: 94 LGDAAAY 100


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 1 MFLGDAAAHW 10
+ LGD A W
Sbjct: 5 VLLGDGMADW 14


>sp|FPOH_METMA|F(420)H(2) dehydrogenase subunit H|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MFLGDAAAHW 10
+FLG AA W
Sbjct: 31 IFLGGMAAVW 40




37|Sequence|181|190|AAAHWYGGAE

>sp|Y1507_METJA|UNCHARACTERIZED ABC transporter permease MJ1507|Methanocaldococcus jannaschii

Query: 5 WYGGAE 10
WYGG E
Sbjct: 102 WYGGCE 107


>sp|MOAC_PYRAE|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrobaculum aerophilum

Query: 3 AHWYGGAE 10
AHW G E
Sbjct: 67 AHWQTGVE 74


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 HWYG 7
HWYG
Sbjct: 194 HWYG 197


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 5 WYGGA 9
WYGG+
Sbjct: 149 WYGGS 153


>sp|TRPG_HALSA|ANTHRANILATE synthase component 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 AAAHWYGG 8
AA H YGG
Sbjct: 92 AAVHEYGG 99


>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WYGG 8
WYGG
Sbjct: 149 WYGG 152


>sp|AROD_METVS|3-DEHYDROQUINATE dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 3 AHWYGGA 9
A+W GGA
Sbjct: 57 ANWEGGA 63


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 WYGGA 9
WYGG
Sbjct: 188 WYGGG 192


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AAHWYGGAE 10
A HW G E
Sbjct: 423 AVHWCGNRE 431


>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 5 WYGG 8
WYGG
Sbjct: 368 WYGG 371




38|Sequence|186|195|YGGAEMRTQH

>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 3 GAEMRTQH 10
GAEM T H
Sbjct: 378 GAEMETYH 385


>sp|TRM56_IGNH4|TRNA (cytidine(56)-2'-O)-methyltransferase|Ignicoccus hospitalis (strain

Query: 1 YGGAEMRTQ 9
YGGAE+ Q
Sbjct: 143 YGGAELYRQ 151


>sp|SYFB_AERPE|PHENYLALANINE--TRNA ligase beta subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 YGGAEM 6
YGG+EM
Sbjct: 162 YGGSEM 167


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM 6242

Query: 2 GGAEMRTQH 10
GG +RT H
Sbjct: 150 GGGSVRTAH 158


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YGGAEMRTQH 10
YGG+ M QH
Sbjct: 167 YGGSIMPGQH 176




39|Sequence|191|200|MRTQHWPIRL

>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 1 MRTQHWPIR 9
M Q WP+R
Sbjct: 186 MMMQKWPVR 194


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 MRTQHWPIR 9
M Q WP+R
Sbjct: 186 MMMQKWPVR 194


>sp|RADA_METMJ|DNA repair and recombination protein|Methanoculleus marisnigri (strain

Query: 1 MRTQHWPIRL 10
+RT +P+RL
Sbjct: 199 LRTSDYPVRL 208


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 191 QRWPVRV 197


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 191 QRWPVRV 197


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 191 QRWPVRV 197


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 191 QRWPVRI 197


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 194 QEWPVR 199


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 194 QEWPVR 199


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 195 QEWPVR 200


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 700922

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 192 QEWPVR 197


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 192 QEWPVR 197


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 195 QEWPVR 200


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 191 QRWPVRV 197


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 188 QRWPVRM 194


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 194 QRWPVRV 200


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 191 QKWPVRI 197


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 190 QKWPVR 195


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 189 QKWPVR 194


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 189 QKWPVR 194


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 189 QKWPVR 194


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 185 QRWPVR 190


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 190 QKWPVR 195


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 189 QKWPVRV 195


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 193 QEWPVR 198


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 185 QRWPVR 190


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 MRTQHW 6
++TQHW
Sbjct: 323 IKTQHW 328


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 185 QKWPVR 190


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 190 QRWPVRI 196


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 190 QRWPVRI 196


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 190 QRWPVRI 196


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 190 QRWPVRI 196


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 190 QRWPVRI 196


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 190 QRWPVRI 196


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 192 QEWPVR 197


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 TQHWP 7
T HWP
Sbjct: 232 TSHWP 236


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 198 QRWPVRI 204


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 6 WPIRL 10
WP+RL
Sbjct: 223 WPVRL 227


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 190 QKWPVRI 196


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 185 QKWPVR 190


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 4 QHWPIRL 10
Q WP+R+
Sbjct: 190 QKWPVRV 196


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 191 QRWPVR 196


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 190 QKWPVR 195


>sp|SPSS1_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanococcoides burtonii (strain DSM 6242

Query: 2 RTQHW 6
RT+HW
Sbjct: 349 RTKHW 353


>sp|COBS_METTH|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanothermobacter thermautotrophicus

Query: 3 TQHWPI 8
T HWP+
Sbjct: 32 TLHWPL 37


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 191 QKWPVR 196


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 185 QKWPVR 190


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 188 QKWPVR 193


>sp|AATC_METBF|A-TYPE ATP synthase subunit C|Methanosarcina barkeri (strain Fusaro /

Query: 2 RTQHWPI 8
RTQ+W +
Sbjct: 276 RTQYWDV 282


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 QHWPIR 9
Q WP+R
Sbjct: 184 QRWPVR 189


>sp|RS4E_METTH|SMALL ribosomal subunit protein eS4|Methanothermobacter

Query: 5 HWPI 8
HWPI
Sbjct: 18 HWPI 21


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 RTQHW 6
RT+HW
Sbjct: 182 RTKHW 186




40|Sequence|196|205|WPIRLDGQQE

>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 1 WPIRLDGQ 8
W +RLD Q
Sbjct: 157 WSVRLDSQ 164


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 1 WPIRLDGQQ 9
WP R +G+Q
Sbjct: 636 WPRRAEGKQ 644


>sp|YA00_PYRHO|PUTATIVE transport protein PH1000|Pyrococcus horikoshii (strain ATCC

Query: 1 WPIRLDGQQ 9
W +R DGQ+
Sbjct: 4 WKMRKDGQR 12


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii (strain

Query: 2 PIRLDGQQE 10
P+R DG+ E
Sbjct: 296 PVREDGKHE 304


>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PIRLDGQQ 9
P RL+GQ+
Sbjct: 203 PFRLEGQK 210


>sp|MTBB3_METBA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina barkeri

Query: 3 IRLDGQQ 9
IRLDG Q
Sbjct: 30 IRLDGDQ 36


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 3 IRLDGQQ 9
IRLDG Q
Sbjct: 78 IRLDGDQ 84


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 3 IRLDGQQ 9
IRLDG Q
Sbjct: 78 IRLDGDQ 84


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 3 IRLDGQQ 9
IRLDG Q
Sbjct: 30 IRLDGDQ 36


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IRLDGQQ 9
IRLDG Q
Sbjct: 78 IRLDGDQ 84


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 3 IRLDGQQ 9
IRLDG Q
Sbjct: 78 IRLDGDQ 84


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 3 IRLDGQQ 9
IRLDG Q
Sbjct: 78 IRLDGDQ 84


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 3 IRLDGQQ 9
IRLDG Q
Sbjct: 78 IRLDGDQ 84


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 3 IRLDGQQ 9
IRLDG Q
Sbjct: 78 IRLDGDQ 84


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 2 PIRLDGQQE 10
P R+D QQE
Sbjct: 547 PGRVDAQQE 555


>sp|AGL7_HALVD|LOW-SALT glycan biosynthesis sulfotransferase Agl7|Haloferax volcanii

Query: 3 IRLDGQQE 10
+RLDG+Q+
Sbjct: 113 LRLDGEQK 120


>sp|ASSY_NATPD|ARGININOSUCCINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WPIRLDGQQ 9
+P+ LDG++
Sbjct: 221 YPVSLDGEK 229




41|Sequence|201|210|DGQQEPQPFV

>sp|PSTB_AERPE|PHOSPHATE import ATP-binding protein PstB|Aeropyrum pernix (strain ATCC

Query: 4 QEPQPF 9
QEP PF
Sbjct: 91 QEPNPF 96


>sp|GATD_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 3 QQEPQP 8
Q+EP+P
Sbjct: 69 QKEPEP 74


>sp|PSTB2_HALSA|PHOSPHATE import ATP-binding protein PstB|Halobacterium salinarum (strain

Query: 4 QEPQPF 9
QEP PF
Sbjct: 173 QEPNPF 178




42|Sequence|206|215|PQPFVTSDVY

>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QPFVTSDV 9
QPFVTS V
Sbjct: 105 QPFVTSGV 112


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 QPFVTSDV 9
QPFVTS V
Sbjct: 102 QPFVTSGV 109


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 QPFVTSDV 9
QPFVTS V
Sbjct: 102 QPFVTSGV 109


>sp|FLAB2_AERPE|PROBABLE flagellin 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 PQPFVTSDVY 10
P PFV +D Y
Sbjct: 148 PGPFVATDAY 157


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 QPFVTSDV 9
QPFVTS V
Sbjct: 102 QPFVTSGV 109


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 QPFVTS 7
QPFVTS
Sbjct: 103 QPFVTS 108


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QPFVTS 7
QPFVTS
Sbjct: 103 QPFVTS 108


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 QPFVTS 7
QPFVTS
Sbjct: 103 QPFVTS 108


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PFVTSDVY 10
PFVT D Y
Sbjct: 237 PFVTEDDY 244


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QPFVTS 7
QPFVTS
Sbjct: 103 QPFVTS 108


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QPFVTS 7
QPFVTS
Sbjct: 103 QPFVTS 108


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QPFVTSDV 9
QPFVTS +
Sbjct: 106 QPFVTSGI 113


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QPFVTS 7
QPFVTS
Sbjct: 106 QPFVTS 111


>sp|PYRF_HALSA|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 2 QPFVTSD 8
QPF+T D
Sbjct: 126 QPFLTQD 132


>sp|PYRF_HALS3|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 2 QPFVTSD 8
QPF+T D
Sbjct: 126 QPFLTQD 132


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PFVTSDVY 10
PF+T ++Y
Sbjct: 686 PFITEEIY 693


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PFVTSDVY 10
PF+T ++Y
Sbjct: 679 PFITEEIY 686


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PFVTSDVY 10
P++T ++Y
Sbjct: 793 PYITEEIY 800


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PFVTSDVY 10
P++T ++Y
Sbjct: 793 PYITEEIY 800




43|Sequence|211|220|TSDVYSSDAA

***** No hits found ******


44|Sequence|216|225|SSDAAFGGIL

>sp|MFNA_METJA|L-TYROSINE/L-ASPARTATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DAAFGGIL 10
DAAFGG++
Sbjct: 206 DAAFGGLV 213


>sp|MFNA_ARCFU|PROBABLE L-aspartate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DAAFGGIL 10
DAAFGG++
Sbjct: 183 DAAFGGLV 190


>sp|PYRC_SULTO|DIHYDROOROTASE tokodaii (strain DSM 16993

Query: 1 SSDAAFGGI 9
+S+AA+GGI
Sbjct: 69 TSEAAYGGI 77


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 3 DAAFGGIL 10
DAAFGG++
Sbjct: 192 DAAFGGMV 199


>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 193 DAAFGGFV 200


>sp|MFNA_METAR|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocella arvoryzae (strain

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 193 DAAFGGFV 200


>sp|MFNA_META3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus aeolicus (strain

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 199 DAAFGGFV 206


>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 193 DAAFGGFV 200


>sp|MFNA_PYRHO|L-ASPARTATE/L-GLUTAMATE decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 195 DAAFGGFV 202


>sp|MFNA_METPE|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaerula palustris

Query: 3 DAAFGGIL 10
DAAFGG++
Sbjct: 191 DAAFGGLV 198


>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 195 DAAFGGFV 202


>sp|MFNA_METBF|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina barkeri (strain

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 209 DAAFGGFV 216


>sp|MFNA_METTH|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothermobacter

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 171 DAAFGGFI 178


>sp|MFNA_METMP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 193 DAAFGGFV 200


>sp|MFNA_PYRAB|PROBABLE L-aspartate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 196 DAAFGGFV 203


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 3 DAAFGGIL 10
DAAFGG++
Sbjct: 191 DAAFGGMV 198


>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix thermoacetophila

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 194 DAAFGGFV 201


>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 209 DAAFGGFV 216


>sp|MFNA_METVS|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus vannielii

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 193 DAAFGGFV 200


>sp|MFNA_METHJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanospirillum hungatei JF-1

Query: 3 DAAFGG 8
DAAFGG
Sbjct: 191 DAAFGG 196


>sp|DTDA_PYRAB|D-AMINOACYL-TRNA deacylase|Pyrococcus abyssi (strain GE5 /

Query: 1 SSDAAFGGIL 10
+SD AFG IL
Sbjct: 208 NSDLAFGHIL 217


>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 3 DAAFGGIL 10
DAAFGG++
Sbjct: 191 DAAFGGMV 198


>sp|MFNA_METS3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanobrevibacter smithii

Query: 3 DAAFGG 8
DAAFGG
Sbjct: 197 DAAFGG 202


>sp|MFNA_METAC|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina acetivorans

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 209 DAAFGGFV 216


>sp|MFNA_THEGJ|PROBABLE L-aspartate decarboxylase|Thermococcus gammatolerans (strain DSM

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 194 DAAFGGFV 201


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 195 DAAFGGFV 202


>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DAAFGGI 9
DAA GGI
Sbjct: 166 DAALGGI 172


>sp|MFNA_THEKO|L-ASPARTATE decarboxylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DAAFGGIL 10
DAAFGG +
Sbjct: 194 DAAFGGFV 201


>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri (strain

Query: 3 DAAFGG 8
DAAFGG
Sbjct: 179 DAAFGG 184


>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 3 DAAFGG 8
DAAFGG
Sbjct: 307 DAAFGG 312




45|Sequence|221|230|FGGILERYWL

>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 FGGILERYWL 10
GGI E YWL
Sbjct: 262 LGGIWEDYWL 271


>sp|RADB_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 2 GGILERYW 9
GG L RYW
Sbjct: 185 GGTLLRYW 192


>sp|GLNK2_METJA|NITROGEN regulatory protein GlnK2|Methanocaldococcus jannaschii (strain

Query: 2 GGILERY 8
GGI+ERY
Sbjct: 40 GGIVERY 46


>sp|GLNK1_METJA|NITROGEN regulatory protein GlnK1|Methanocaldococcus jannaschii (strain

Query: 2 GGILERY 8
GGI+ERY
Sbjct: 40 GGIVERY 46


>sp|Y052_ARCFU|UNCHARACTERIZED protein AF_0052|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FGGILERYW 9
+GG++ YW
Sbjct: 56 YGGLVSNYW 64


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 LERYWL 10
L+RYWL
Sbjct: 85 LQRYWL 90


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GGILERY 8
GG+L+RY
Sbjct: 528 GGVLDRY 534


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 ILERYWL 10
ILER WL
Sbjct: 432 ILERNWL 438


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 1 FGGILERYWL 10
+ I+ER+W+
Sbjct: 440 YADIIERWWV 449


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 2 GGILERY 8
GG+LER+
Sbjct: 183 GGVLERW 189


>sp|ARNR1_SULAC|HTH-TYPE transcriptional activator ArnR1|Sulfolobus acidocaldarius (strain

Query: 3 GILERYWL 10
GILE WL
Sbjct: 243 GILEAIWL 250


>sp|HFLX_NITMS|GTPASE HflX|Nitrosopumilus maritimus (strain SCM1)

Query: 2 GGILER 7
GGILER
Sbjct: 47 GGILER 52


>sp|Y1527_METJA|UPF0132 membrane protein MJ1527|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FGGILERYW 9
FG I ERY+
Sbjct: 127 FGDIAERYY 135


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 5 LERYW 9
+ERYW
Sbjct: 218 IERYW 222


>sp|RL3_SACS2|LARGE ribosomal subunit protein uL3|Saccharolobus solfataricus (strain

Query: 1 FGGILERY 8
F G+++RY
Sbjct: 226 FAGVIKRY 233


>sp|RL3_SACI7|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 FGGILERY 8
F G+++RY
Sbjct: 226 FAGVIKRY 233


>sp|RL3_SACI2|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 FGGILERY 8
F G+++RY
Sbjct: 226 FAGVIKRY 233


>sp|RL3_SACI1|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 FGGILERY 8
F G+++RY
Sbjct: 226 FAGVIKRY 233


>sp|RL3_SACI6|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 FGGILERY 8
F G+++RY
Sbjct: 226 FAGVIKRY 233


>sp|RL3_SACI4|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 FGGILERY 8
F G+++RY
Sbjct: 226 FAGVIKRY 233


>sp|RL3_SACI3|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 FGGILERY 8
F G+++RY
Sbjct: 226 FAGVIKRY 233


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 1 FGGILE 6
FGGILE
Sbjct: 108 FGGILE 113




46|Sequence|226|235|ERYWLSSRAA

>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 2 RYWLSSRAA 10
RYW+SSR A
Sbjct: 228 RYWVSSRDA 236


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 2 RYWLSSRAA 10
RYW+SSR A
Sbjct: 228 RYWVSSRDA 236


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERYWL 5
ERYWL
Sbjct: 518 ERYWL 522


>sp|HIS1_SULAC|ATP phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 RYWLSSRAA 10
RYW+ S A
Sbjct: 186 RYWMKSDEA 194


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ERYWLS 6
+RYWL+
Sbjct: 86 QRYWLN 91


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 RYWLSS 7
RYWLSS
Sbjct: 287 RYWLSS 292


>sp|Y1621_ARCFU|UPF0324 membrane protein AF_1621|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YWLSSR 8
+WLSSR
Sbjct: 117 FWLSSR 122


>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 YWLSSR 8
YW SSR
Sbjct: 178 YWASSR 183


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 RYWLSS 7
RYW++S
Sbjct: 372 RYWINS 377


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RYWLSS 7
RYW++S
Sbjct: 371 RYWINS 376


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RYWLSS 7
RYW++S
Sbjct: 371 RYWINS 376




47|Sequence|231|240|SSRAAAIKVN

***** No hits found ******


48|Sequence|236|245|AIKVNDSVPF

>sp|SRP19_META3|SIGNAL recognition particle 19 kDa|Methanococcus aeolicus (strain ATCC

Query: 2 IKVNDSVP 9
+KVND +P
Sbjct: 69 VKVNDDIP 76


>sp|UPP_NATPD|URACIL phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 KVNDSVP 9
+VNDS+P
Sbjct: 184 RVNDSIP 190


>sp|SDX_SULTO|SULREDOXIN tokodaii (strain DSM 16993

Query: 1 AIKVNDSVPF 10
A+KV+D V F
Sbjct: 19 AVKVDDKVIF 28


>sp|RL39_METS5|LARGE ribosomal subunit protein eL39|Metallosphaera sedula (strain ATCC

Query: 1 AIKVNDSVP 9
A+K N SVP
Sbjct: 16 ALKSNSSVP 24




49|Sequence|241|250|DSVPFHLGWN

>sp|Y1029_THESM|UPF0282 protein TSIB_1029|Thermococcus sibiricus (strain DSM 12597

Query: 3 VPFHLGW 9
VPF +GW
Sbjct: 296 VPFDVGW 302


>sp|SYY2_PYRAE|TYROSINE--TRNA ligase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PFHLGW 9
P H+GW
Sbjct: 34 PIHIGW 39


>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 FHLGW 9
FH+GW
Sbjct: 50 FHIGW 54


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 FHLGW 9
FH+GW
Sbjct: 45 FHIGW 49


>sp|SYY_SACS2|TYROSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 FHLGW 9
FH+GW
Sbjct: 50 FHIGW 54


>sp|SYY_SACI7|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 FHLGW 9
FH+GW
Sbjct: 45 FHIGW 49


>sp|SYY_SACI6|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 FHLGW 9
FH+GW
Sbjct: 45 FHIGW 49


>sp|SYY_SACI4|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 FHLGW 9
FH+GW
Sbjct: 45 FHIGW 49


>sp|SYY_SACI3|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 FHLGW 9
FH+GW
Sbjct: 45 FHIGW 49


>sp|SYY_SACI2|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 FHLGW 9
FH+GW
Sbjct: 45 FHIGW 49


>sp|SYY_SACI1|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 FHLGW 9
FH+GW
Sbjct: 45 FHIGW 49


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DSVPFHL 7
D+VPFH+
Sbjct: 295 DNVPFHV 301


>sp|Y1488_ARCFU|UNCHARACTERIZED protein AF_1488|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PFHLG 8
PFHLG
Sbjct: 15 PFHLG 19


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DSVPFHL 7
D+VPFH+
Sbjct: 295 DNVPFHV 301


>sp|NADM1_SULAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase 1|Sulfolobus acidocaldarius (strain ATCC

Query: 4 PFHLG 8
PFHLG
Sbjct: 11 PFHLG 15


>sp|NADK_ARCFU|NAD kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PFHLGW 9
PF GW
Sbjct: 181 PFRFGW 186


>sp|NADM_METTI|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanolobus tindarius

Query: 4 PFHLG 8
PFHLG
Sbjct: 12 PFHLG 16


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PFHLG 8
PFHLG
Sbjct: 41 PFHLG 45


>sp|NADM_THEVO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PFHLG 8
PFHLG
Sbjct: 17 PFHLG 21


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 4 PFHLG 8
PFHLG
Sbjct: 52 PFHLG 56


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DSVPFH 6
D++PFH
Sbjct: 298 DNIPFH 303


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DSVPFH 6
D++PFH
Sbjct: 298 DNIPFH 303


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PFHLG 8
PFHLG
Sbjct: 40 PFHLG 44


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DSVPFHL 7
D++PFH+
Sbjct: 295 DNIPFHV 301


>sp|OGT_PYRAE|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PFHLGW 9
P H+GW
Sbjct: 72 PRHVGW 77


>sp|NADM_SACS2|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PFHLG 8
PFHLG
Sbjct: 12 PFHLG 16


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 DSVPFH 6
D++PFH
Sbjct: 299 DNIPFH 304


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DSVPFH 6
D++PFH
Sbjct: 298 DNIPFH 303


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DSVPFH 6
D++PFH
Sbjct: 326 DNIPFH 331


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DSVPFH 6
D++PFH
Sbjct: 295 DNIPFH 300


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DSVPFH 6
D++PFH
Sbjct: 297 DNIPFH 302


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DSVPFH 6
D++PFH
Sbjct: 293 DNIPFH 298


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DSVPFHL 7
D++PFH+
Sbjct: 291 DNIPFHV 297


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DSVPFH 6
D++PFH
Sbjct: 299 DNIPFH 304


>sp|NADM_SULTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PFHLG 8
PFHLG
Sbjct: 11 PFHLG 15


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DSVPFH 6
D++PFH
Sbjct: 295 DNIPFH 300


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DSVPFHL 7
D++PFH+
Sbjct: 295 DNIPFHV 301


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 DSVPFH 6
D++PFH
Sbjct: 296 DNIPFH 301


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DSVPFH 6
D++PFH
Sbjct: 295 DNIPFH 300


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DSVPFHL 7
D++PFH+
Sbjct: 293 DNIPFHV 299


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DSVPFH 6
D++PFH
Sbjct: 295 DNIPFH 300


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DSVPFH 6
D++PFH
Sbjct: 293 DNIPFH 298


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 DSVPFH 6
D++PFH
Sbjct: 300 DNIPFH 305


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 DSVPFH 6
D++PFH
Sbjct: 294 DNIPFH 299


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DSVPFH 6
D++PFH
Sbjct: 297 DNIPFH 302


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DSVPFH 6
D++PFH
Sbjct: 308 DNIPFH 313


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DSVPFH 6
D++PFH
Sbjct: 296 DNIPFH 301




50|Sequence|246|255|HLGWNSTERS

>sp|HIS5_PICTO|IMIDAZOLE glycerol phosphate synthase subunit|Picrophilus torridus (strain

Query: 1 HLGWNSTE 8
H+GWN+ E
Sbjct: 105 HMGWNTVE 112


>sp|HIS5_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 1 HLGWNSTE 8
H+GWN+ E
Sbjct: 116 HMGWNTVE 123


>sp|HIS5_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 1 HLGWNSTE 8
H+GWNS +
Sbjct: 113 HMGWNSVK 120


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 3 GWNSTERS 10
GW STE+S
Sbjct: 149 GWRSTEKS 156


>sp|HIS51_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 HLGWNSTER 9
H+GWN+ +
Sbjct: 119 HMGWNTVNQ 127


>sp|HIS5_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus (strain

Query: 1 HLGWNS 6
H+GWN+
Sbjct: 112 HMGWNT 117


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 GWNSTE 8
GWNS+E
Sbjct: 137 GWNSSE 142


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 GWNSTE 8
GWNS+E
Sbjct: 137 GWNSSE 142


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 GWNSTE 8
GWNS+E
Sbjct: 137 GWNSSE 142


>sp|HIS5_METAC|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina acetivorans

Query: 1 HLGWNS 6
H+GWN+
Sbjct: 117 HMGWNN 122


>sp|HIS5_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri (strain

Query: 1 HLGWNSTE 8
H+GWN+ +
Sbjct: 117 HIGWNNIK 124


>sp|HIS52_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 HLGWNSTERS 10
H+GWN + S
Sbjct: 118 HMGWNYVKFS 127


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 HLGWN 5
HLGWN
Sbjct: 170 HLGWN 174


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 HLGWNSTE 8
HLGW++ E
Sbjct: 313 HLGWDTPE 320


>sp|HIS5_NATPD|IMIDAZOLE glycerol phosphate synthase subunit|Natronomonas pharaonis (strain

Query: 1 HLGWN 5
H+GWN
Sbjct: 127 HMGWN 131


>sp|HIS5_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 1 HLGWN 5
H+GWN
Sbjct: 114 HMGWN 118


>sp|HIS5_HALSA|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum (strain

Query: 1 HLGWN 5
H+GWN
Sbjct: 130 HMGWN 134


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 3 GWNSTE 8
GWNST+
Sbjct: 137 GWNSTK 142


>sp|HIS5_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 1 HLGWN 5
H+GWN
Sbjct: 108 HIGWN 112


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 1 HLGWN 5
H+GWN
Sbjct: 110 HIGWN 114


>sp|HIS5_HALMA|IMIDAZOLE glycerol phosphate synthase subunit|Haloarcula marismortui (strain

Query: 1 HLGWNSTE 8
H+GWN +
Sbjct: 127 HMGWNELD 134


>sp|HTR8_HALS3|TRANSDUCER protein Htr8|Halobacterium salinarum (strain ATCC 29341

Query: 4 WNSTERS 10
W STERS
Sbjct: 206 WYSTERS 212


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 GWNSTER 9
GW TER
Sbjct: 528 GWEITER 534


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 2 LGWNSTERS 10
+ WNST ++
Sbjct: 503 VSWNSTSKA 511




51|Sequence|251|260|STERSLRLQA

***** No hits found ******


52|Sequence|256|265|LRLQARYHDT

>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 LRLQARYHD 9
LRL+ R HD
Sbjct: 521 LRLEERRHD 529


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 2 RLQARYHD 9
RLQ +HD
Sbjct: 132 RLQLHFHD 139


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LRLQARYHD 9
LR RYHD
Sbjct: 38 LREALRYHD 46


>sp|RS4E_PYRNV|SMALL ribosomal subunit protein eS4|Pyrobaculum neutrophilum (strain DSM

Query: 2 RLQARYHD 9
RLQ +HD
Sbjct: 132 RLQVHFHD 139


>sp|RL30_ARCFU|LARGE ribosomal subunit protein uL30|Archaeoglobus fulgidus (strain

Query: 1 LRLQARYH 8
LRL RYH
Sbjct: 24 LRLHKRYH 31




53|Sequence|261|270|RYHDTPYKPP

>sp|KAE1B_METMJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 HDTPYKPP 10
H +PY PP
Sbjct: 34 HSSPYVPP 41


>sp|MTM3_METJA|TYPE II methyltransferase M.MjaIII|Methanocaldococcus jannaschii (strain

Query: 2 YHDTPYKP 9
Y D PYKP
Sbjct: 197 YFDPPYKP 204


>sp|KAE1B_METLZ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 HDTPYKPP 10
H PY PP
Sbjct: 29 HSAPYVPP 36


>sp|DHA_METMP|ALANINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RYHDTPYKP 9
+ HD PY P
Sbjct: 358 KAHDLPYTP 366


>sp|MFNB_METTH|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 4 DTPYKP 9
D PYKP
Sbjct: 61 DVPYKP 66


>sp|MFNB_METS3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 DTPYKP 9
D PYKP
Sbjct: 61 DVPYKP 66


>sp|MFNB_METMP|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 DTPYKP 9
D PYKP
Sbjct: 61 DVPYKP 66


>sp|MFNB_METM7|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 4 DTPYKP 9
D PYKP
Sbjct: 61 DVPYKP 66


>sp|MFNB_METM6|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 4 DTPYKP 9
D PYKP
Sbjct: 61 DVPYKP 66


>sp|MFNB_METM5|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 4 DTPYKP 9
D PYKP
Sbjct: 61 DVPYKP 66


>sp|MFNB_METKA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 DTPYKP 9
D PYKP
Sbjct: 63 DVPYKP 68


>sp|MFNB_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DTPYKP 9
D PYKP
Sbjct: 61 DVPYKP 66


>sp|MFNB_META3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 DTPYKP 9
D PYKP
Sbjct: 61 DVPYKP 66


>sp|Y1312_METJA|UPF0026 protein MJ1312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YHDTPYKPP 10
Y +TP +PP
Sbjct: 201 YLNTPIRPP 209


>sp|CDC61_SULAC|ORC1-TYPE DNA replication protein 1|Sulfolobus acidocaldarius (strain ATCC

Query: 1 RYHDTPYK 8
R +DTPY+
Sbjct: 96 RQNDTPYR 103


>sp|MFNB_ARCFU|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DTPYKP 9
D PYKP
Sbjct: 62 DMPYKP 67


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 RYHDTPYKP 9
+Y+D PY P
Sbjct: 364 KYYDIPYYP 372


>sp|RRP41_SACS2|EXOSOME complex component Rrp41|Saccharolobus solfataricus (strain ATCC

Query: 1 RYHDTPY 7
RYH TP+
Sbjct: 80 RYHMTPF 86


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 YHDTPY 7
YHD PY
Sbjct: 190 YHDLPY 195


>sp|RRP41_SULAC|EXOSOME complex component Rrp41|Sulfolobus acidocaldarius (strain ATCC

Query: 1 RYHDTPY 7
RYH TP+
Sbjct: 77 RYHMTPF 83


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 4 DTPYKP 9
D PYKP
Sbjct: 368 DKPYKP 373


>sp|RRP41_SULTO|EXOSOME complex component Rrp41|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RYHDTPY 7
RYH TP+
Sbjct: 77 RYHMTPF 83


>sp|PUR7_METB6|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanoregula boonei (strain DSM 21154

Query: 5 TPYKPP 10
TP KPP
Sbjct: 111 TPLKPP 116


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 DTPYKP 9
D PYKP
Sbjct: 372 DRPYKP 377


>sp|COPP_THEVO|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 2 YHDTPYKPP 10
++DT Y PP
Sbjct: 320 FYDTTYTPP 328


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 DTPYKP 9
D PYKP
Sbjct: 372 DRPYKP 377


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 YHDTPYK 8
Y D PYK
Sbjct: 149 YEDNPYK 155


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RYHDTP 6
+YHD P
Sbjct: 102 KYHDVP 107


>sp|RL3_HALWD|LARGE ribosomal subunit protein uL3|Haloquadratum walsbyi (strain DSM

Query: 2 YHDTPY 7
Y DTPY
Sbjct: 88 YEDTPY 93




54|Sequence|266|275|PYKPPAGRAA

>sp|RL13_METJA|LARGE ribosomal subunit protein uL13|Methanocaldococcus jannaschii

Query: 1 PYKPPAGRAA 10
PYK P GR A
Sbjct: 85 PYKKPKGREA 94


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PYKPPAG 7
PY PP G
Sbjct: 140 PYNPPEG 146


>sp|KAE1_PYRCJ|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum

Query: 2 YKPPAGR 8
Y PPAGR
Sbjct: 38 YVPPAGR 44


>sp|Y317_METJA|UNCHARACTERIZED protein MJ0317|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PYKPP 5
PYKPP
Sbjct: 156 PYKPP 160


>sp|RL13_METST|LARGE ribosomal subunit protein uL13|Methanosphaera stadtmanae (strain

Query: 1 PYKPPAGRAA 10
PY+ GRAA
Sbjct: 86 PYRKAHGRAA 95




55|Sequence|271|280|AGRAAAPELS

>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 2 GRAAAP 7
GRAAAP
Sbjct: 33 GRAAAP 38




56|Sequence|276|285|APELSYRVCV

>sp|PYRDB_METJA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocaldococcus jannaschii

Query: 2 PELSYRVC 9
P+LSY VC
Sbjct: 147 PDLSYDVC 154


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PELSYRVC 9
PE+ +RVC
Sbjct: 631 PEVGHRVC 638


>sp|RS4E_KORCO|SMALL ribosomal subunit protein eS4|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PELSYR 7
PELSYR
Sbjct: 211 PELSYR 216


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 APELSYRVCV 10
+PE SYR+ V
Sbjct: 477 SPEPSYRILV 486


>sp|Y1566_ARCFU|UNCHARACTERIZED protein AF_1566|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PELSYRV 8
PEL+YR+
Sbjct: 191 PELAYRL 197


>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 2 PELSYRVCV 10
PE++Y CV
Sbjct: 225 PEMAYFECV 233


>sp|NNR_METKA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanopyrus kandleri (strain

Query: 2 PELSYRVC 9
PE++ R+C
Sbjct: 208 PEIAERIC 215




57|Sequence|281|290|YRVCVGSDVT

>sp|Y087_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 2 RVCVGSD 8
R+C+G D
Sbjct: 286 RICIGGD 292


>sp|RDFA_HALVD|ROD-DETERMINING factor A|Haloferax volcanii (strain ATCC 29605

Query: 1 YRVCVGSDVT 10
YR+ G DVT
Sbjct: 80 YRLLTGDDVT 89


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RVCVGSD 8
RVC+G D
Sbjct: 333 RVCIGED 339


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 1 YRVCVGSD 8
Y C+GSD
Sbjct: 144 YIFCIGSD 151


>sp|Y064_ARCFU|UNCHARACTERIZED protein AF_0064|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VCVGSD 8
VCVG+D
Sbjct: 58 VCVGTD 63


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 3 VCVGSD 8
VC+GSD
Sbjct: 377 VCLGSD 382


>sp|HPCD_METS5|3-HYDROXYPROPIONYL-COENZYME A dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 4 CVGSDVT 10
C G+D+T
Sbjct: 62 CAGADIT 68


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 1 YRVCVGSDVT 10
Y V VG+D+
Sbjct: 439 YEVLVGTDIA 448


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 YRVCVG 6
Y VCVG
Sbjct: 438 YEVCVG 443




58|Sequence|286|295|GSDVTSIHKY

>sp|PDXT_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 SDVTSIHKY 10
SD TSIH+Y
Sbjct: 185 SDTTSIHEY 193


>sp|PDXT_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 SDVTSIHKY 10
SD TSIH+Y
Sbjct: 185 SDTTSIHEY 193


>sp|PDXT_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 SDVTSIHKY 10
SD TSIH+Y
Sbjct: 185 SDTTSIHEY 193


>sp|PDXT_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 SDVTSIHKY 10
SD TSIH+Y
Sbjct: 185 SDTTSIHEY 193


>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 SDVTSIHKY 10
SD TSIH+Y
Sbjct: 185 SDTTSIHEY 193


>sp|PDXT_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus solfataricus

Query: 2 SDVTSIHKY 10
SD TSIH+Y
Sbjct: 185 SDTTSIHEY 193


>sp|PDXT_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 SDVTSIHKY 10
SD TSIH+Y
Sbjct: 185 SDTTSIHEY 193


>sp|PURA_METM7|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C7 /

Query: 1 GSDVTSIHKY 10
G DV SI KY
Sbjct: 146 GKDVESISKY 155


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GSDVTSIHKY 10
G DV SI KY
Sbjct: 146 GKDVESISKY 155


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 1 GSDVTSIHKY 10
G DV SI KY
Sbjct: 146 GKDVESISKY 155


>sp|PURA_METM6|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C6 /

Query: 1 GSDVTSIHKY 10
G D+ SI KY
Sbjct: 146 GKDIESISKY 155


>sp|PDXT_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Metallosphaera sedula (strain

Query: 2 SDVTSIHKY 10
S TSIH+Y
Sbjct: 183 SGTTSIHEY 191


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 GSDVTSIHKY 10
GSD+ H Y
Sbjct: 192 GSDLVGFHTY 201


>sp|SURE_METHJ|5'-NUCLEOTIDASE SurE|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GSDVTSIHK 9
G+DV +IHK
Sbjct: 243 GTDVHAIHK 251


>sp|ARGC_METTP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GSDVTSIHKY 10
G VTS+H++
Sbjct: 39 GKPVTSVHQH 48


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GSDVTSIH 8
G+D+ S+H
Sbjct: 509 GADIVSVH 516


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GSDVTSIH 8
G+D+ S+H
Sbjct: 509 GADIVSVH 516


>sp|KCY_PYRCJ|CYTIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GSDVTSIHKY 10
G D+ HKY
Sbjct: 44 GMDLLEFHKY 53




59|Sequence|291|300|SIHKYMVRRY

>sp|LEUC2_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 IHKYMVRRY 10
IH+ MV RY
Sbjct: 99 IHQIMVERY 107


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 IHKYMVRRY 10
I YMVRRY
Sbjct: 216 IPPYMVRRY 224


>sp|APGM_METST|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaera stadtmanae (strain ATCC

Query: 1 SIHKYMV 7
S+HKY+V
Sbjct: 280 SVHKYIV 286


>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 IHKYMVRRY 10
I YMVR+Y
Sbjct: 216 IPPYMVRKY 224


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 IHKYMVRRY 10
I YMVRR+
Sbjct: 216 IPPYMVRRF 224


>sp|LEUC_SULAC|3-ISOPROPYLMALATE dehydratase large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 IHKYMVRRY 10
+H+ M+ RY
Sbjct: 101 LHQIMIERY 109


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IHKYMVRRY 10
I YMVRR+
Sbjct: 216 IPPYMVRRF 224


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain

Query: 3 HKYMVRR 9
HKY VRR
Sbjct: 77 HKYKVRR 83


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IHKYMVRRY 10
I YMVRR+
Sbjct: 216 IPPYMVRRF 224


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IHKYMVRRY 10
I YMVRR+
Sbjct: 216 IPPYMVRRF 224


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 IHKYMVRRY 10
I YMVRR+
Sbjct: 216 IPPYMVRRF 224


>sp|DPHB_METS5|DIPHTHINE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 SIHKYMVRR 9
S+H YM+ R
Sbjct: 115 SVHCYMISR 123


>sp|RNP3_PYRHO|RIBONUCLEASE P protein component 3|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IHKYMVRRY 10
+ KY VRR+
Sbjct: 156 VEKYKVRRF 164




60|Sequence|296|305|MVRRYFNKPS

>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MVRRYFN 7
MVRRYFN
Sbjct: 399 MVRRYFN 405


>sp|NCPP_PYRAR|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum arsenaticum (strain

Query: 1 MVRRYFNKPS 10
+ RYF KPS
Sbjct: 125 LAERYFKKPS 134


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 2 VRRYFNKP 9
+RRYF++P
Sbjct: 163 MRRYFSRP 170


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 2 VRRYFNKP 9
+RRYF +P
Sbjct: 163 IRRYFARP 170


>sp|DAPA_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 MVRRYFNKPS 10
++ Y+NKPS
Sbjct: 100 LITPYYNKPS 109


>sp|DAPA_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 MVRRYFNKPS 10
++ Y+NKPS
Sbjct: 100 LITPYYNKPS 109


>sp|Y1980_AERPE|PROTEIN APE_1980.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 MVRRYFNK 8
MVRR+++K
Sbjct: 102 MVRRFYSK 109


>sp|MTRE_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus vannielii (strain

Query: 2 VRRYFNK 8
+ RYFNK
Sbjct: 50 IHRYFNK 56


>sp|MTRE_METVA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus vannielii

Query: 2 VRRYFNK 8
+ RYFNK
Sbjct: 50 IHRYFNK 56


>sp|MTRE_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain

Query: 2 VRRYFNK 8
+ RYFNK
Sbjct: 50 IHRYFNK 56


>sp|MTRE_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain

Query: 2 VRRYFNK 8
+ RYFNK
Sbjct: 50 IHRYFNK 56


>sp|MTRE_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain

Query: 2 VRRYFNK 8
+ RYFNK
Sbjct: 50 IHRYFNK 56


>sp|MTRE_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanocaldococcus jannaschii

Query: 2 VRRYFNK 8
+ RYFNK
Sbjct: 50 IHRYFNK 56


>sp|MTRE_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus aeolicus (strain ATCC

Query: 2 VRRYFNK 8
+ RYFNK
Sbjct: 50 IHRYFNK 56


>sp|DAPA_ARCFU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MVRRYFNKPS 10
+V Y+NKP+
Sbjct: 99 LVTPYYNKPN 108


>sp|KTHY1_SACS2|PROBABLE thymidylate kinase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MVRRYFNKP 9
MV YF KP
Sbjct: 109 MVNSYFPKP 117


>sp|DAPA_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 MVRRYFNKPS 10
++ Y+NKP+
Sbjct: 100 LITPYYNKPT 109


>sp|DAPA_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 MVRRYFNKPS 10
++ Y+NKP+
Sbjct: 100 LITPYYNKPT 109


>sp|DAPA_METMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MVRRYFNKPS 10
++ Y+NKP+
Sbjct: 100 LISPYYNKPN 109


>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 MVRRYFNKPS 10
++ Y+NKP+
Sbjct: 104 LISPYYNKPN 113


>sp|DAPA_METBF|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 MVRRYFNKPS 10
++ Y+NKP+
Sbjct: 100 LISPYYNKPN 109


>sp|DAPA_METAC|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MVRRYFNKPS 10
++ Y+NKP+
Sbjct: 100 LISPYYNKPN 109


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VRRYFNKPS 10
+ R+F KPS
Sbjct: 520 ISRFFGKPS 528


>sp|DAPA_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 MVRRYFNKPS 10
++ Y+NKP+
Sbjct: 100 LITPYYNKPT 109


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VRRYFNK 8
+RRYF K
Sbjct: 354 IRRYFEK 360


>sp|OTC_PYRCJ|ORNITHINE carbamoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 MVRRYFNKPS 10
+V YF KPS
Sbjct: 43 IVMLYFEKPS 52


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VRRYFNKPS 10
VRR++ KP
Sbjct: 222 VRRFYEKPE 230


>sp|RNP3_ARCFU|RIBONUCLEASE P protein component 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MVRRYFNK 8
+VRRYF++
Sbjct: 174 LVRRYFDE 181


>sp|DAPA_HALMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 MVRRYFNKP 9
++ Y+NKP
Sbjct: 105 LISPYYNKP 113


>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 MVRRYFNKPS 10
+V YF KPS
Sbjct: 43 LVVLYFEKPS 52


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 2 VRRYFNK 8
VR+YF+K
Sbjct: 254 VRKYFSK 260


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 2 VRRYFNKP 9
+RRY KP
Sbjct: 163 IRRYATKP 170


>sp|DAPA_METMJ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 MVRRYFNKPS 10
++ Y+NKP+
Sbjct: 104 IISPYYNKPN 113


>sp|DAPA_METHJ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 MVRRYFNKPS 10
++ Y+NKP+
Sbjct: 104 VISPYYNKPN 113


>sp|DAPA_METBU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 MVRRYFNKPS 10
++ Y+NKP+
Sbjct: 100 VISPYYNKPN 109


>sp|DAPA_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 MVRRYFNKP 9
++ Y+NKP
Sbjct: 100 LITPYYNKP 108




61|Sequence|301|310|FNKPSRVPAP

>sp|AROB_PYRAB|3-DEHYDROQUINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FNKPSRVPAP 10
FN P+++P P
Sbjct: 275 FNLPTKLPYP 284


>sp|COBD_METMP|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 FNKPSRVPAP 10
FN+ S+ P+P
Sbjct: 239 FNEGSKTPSP 248


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 1 FNKPSRVPA 9
FN P VPA
Sbjct: 87 FNHPQDVPA 95


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NKPSRVP 8
NKP+R+P
Sbjct: 290 NKPARIP 296


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 KPSRVP 8
KPSR+P
Sbjct: 527 KPSRIP 532


>sp|Y671_SACI1|UPF0282 protein YN1551_0671|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 NKPSRVP 8
N+P+R+P
Sbjct: 290 NRPARIP 296


>sp|Y2281_SACI2|UPF0282 protein LS215_2281|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NKPSRVP 8
N+P+R+P
Sbjct: 290 NRPARIP 296


>sp|Y2245_SACI7|UPF0282 protein YG5714_2245|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NKPSRVP 8
N+P+R+P
Sbjct: 290 NRPARIP 296




62|Sequence|306|315|RVPAPEAFRD

>sp|TRPB_DESA1|TRYPTOPHAN synthase beta chain|Desulfurococcus amylolyticus (strain DSM

Query: 1 RVPAPEAFRD 10
R+P PEA R+
Sbjct: 61 RIPIPEAVRE 70


>sp|IF6_METLZ|TRANSLATION initiation factor 6|Methanocorpusculum labreanum (strain ATCC

Query: 2 VPAPEAFRD 10
V AP+ FRD
Sbjct: 28 VEAPKEFRD 36


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 APEAFRD 10
APE FRD
Sbjct: 183 APEEFRD 189


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 2 VPAPEAFRD 10
VP E FRD
Sbjct: 426 VPQEELFRD 434


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain ATCC

Query: 1 RVPAPEAFRD 10
RVPAPE D
Sbjct: 256 RVPAPEGGAD 265


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VPAPEAFRD 10
+P PE FRD
Sbjct: 105 LPPPEDFRD 113


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VPAPEAFRD 10
+P PE FRD
Sbjct: 105 LPPPEDFRD 113


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VPAPEAFRD 10
+P PE FRD
Sbjct: 105 LPPPEDFRD 113


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VPAPEAFRD 10
+P PE FRD
Sbjct: 105 LPPPEDFRD 113


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VPAPEAFRD 10
+P PE FRD
Sbjct: 105 LPPPEDFRD 113


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 VPAPEAFR 9
V PEAFR
Sbjct: 47 VATPEAFR 54


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVPAPEAFRD 10
R APE F+D
Sbjct: 180 RKMAPEEFKD 189




63|Sequence|311|320|EAFRDPIWST

>sp|OFOA_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Sulfolobus sp

Query: 1 EAFRDPIWS 9
EAF+D IW+
Sbjct: 383 EAFKDAIWA 391


>sp|OFOA1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 1 EAFRDPIWS 9
EAF+D IW+
Sbjct: 383 EAFKDAIWA 391


>sp|MTRD_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina acetivorans (strain

Query: 1 EAFRDPIW 8
E F DP W
Sbjct: 211 EGFHDPKW 218


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 EAFRDPIW 8
EAF D +W
Sbjct: 354 EAFEDQLW 361


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EAFRDPIW 8
+A+R P+W
Sbjct: 349 KAYRIPVW 356


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AFRDPIW 8
+FR P+W
Sbjct: 65 SFRSPLW 71


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 EAFRDPIW 8
EAF D +W
Sbjct: 354 EAFEDQLW 361


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 EAFRDPIW 8
EAF D +W
Sbjct: 354 EAFEDQLW 361


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EAFRDPIW 8
EAF D +W
Sbjct: 354 EAFEDQLW 361


>sp|CBID_THEAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EAFRDPIW 8
E R P+W
Sbjct: 327 ERLRSPVW 334


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FRDPIW 8
FRD IW
Sbjct: 282 FRDTIW 287


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus (Sulfolobus

Query: 1 EAFRDPIWS 9
EAF D W+
Sbjct: 384 EAFHDGTWA 392


>sp|IF2A_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 EAFRDPIW 8
EA+R+ +W
Sbjct: 130 EAYREVLW 137


>sp|IPYR_METMA|INORGANIC pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 RDPIWS 9
RDP+W+
Sbjct: 102 RDPLWN 107


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 FRDPIWST 10
+ +PIW T
Sbjct: 454 YSNPIWKT 461


>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 2 AFRDPIWS 9
AFRD W+
Sbjct: 520 AFRDSSWT 527


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 FRDPIW 8
F DP+W
Sbjct: 444 FLDPLW 449




64|Sequence|316|325|PIWSTWALYG

>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IWSTWALYG 10
IW W +YG
Sbjct: 523 IWKDWLIYG 531


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus

Query: 2 IWSTWALY 9
++ TWALY
Sbjct: 87 VFQTWALY 94


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 PIWSTWAL 8
P+W +W +
Sbjct: 452 PLWKSWTM 459


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 IWSTWALYG 10
+WS++ +YG
Sbjct: 21 VWSSFEIYG 29


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IWSTWALYG 10
+WS++ +YG
Sbjct: 19 LWSSFEIYG 27


>sp|PELO_METST|PROTEIN pelota homolog|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IWSTWAL 8
IW+ W+L
Sbjct: 115 IWNKWSL 121


>sp|PELO_METS3|PROTEIN pelota homolog|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 WSTWAL 8
W+ WAL
Sbjct: 117 WANWAL 122


>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 3 WSTWALYG 10
W T A+YG
Sbjct: 84 WGTCAVYG 91


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PIWSTW 6
P++STW
Sbjct: 270 PLYSTW 275


>sp|Y916_METJA|UNCHARACTERIZED protein MJ0916|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PIWSTWALY 9
PI++T A+Y
Sbjct: 12 PIYTTTAIY 20


>sp|DPCKG_THEPD|GTP-DEPENDENT dephospho-CoA kinase|Thermofilum pendens (strain DSM 2475

Query: 1 PIWSTWALYG 10
P+ +W +YG
Sbjct: 136 PLNDSWVIYG 145


>sp|LIVM_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 1 PIWSTWALYG 10
P+W ++ L+G
Sbjct: 301 PVWLSYMLFG 310


>sp|NADA_THEGJ|QUINOLINATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PIWSTWALY 9
P W+ W ++
Sbjct: 224 PEWNEWVVF 232


>sp|AATC_HALLT|A-TYPE ATP synthase subunit C|Halorubrum lacusprofundi (strain ATCC

Query: 3 WSTWALYG 10
WS +LYG
Sbjct: 84 WSEGSLYG 91


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PIWSTW 6
P WS W
Sbjct: 116 PPWSVW 121


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 1 PIWSTW 6
P WS W
Sbjct: 117 PPWSVW 122


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 1 PIWSTW 6
P WS W
Sbjct: 116 PPWSVW 121


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 IWSTWALYG 10
+W+++ +YG
Sbjct: 17 LWNSFEIYG 25


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IWSTWALYG 10
+W+++ +YG
Sbjct: 17 LWNSFEIYG 25


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 IWSTWALYG 10
+W+++ +YG
Sbjct: 17 LWNSFEIYG 25


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 IWSTWALYG 10
+W+++ +YG
Sbjct: 17 LWNSFEIYG 25


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 IWSTWALYG 10
+W+++ +YG
Sbjct: 17 LWNSFEIYG 25


>sp|VHUG_METJA|F420-NON-REDUCING hydrogenase vhu subunit G|Methanocaldococcus jannaschii (strain

Query: 3 WSTWALYG 10
W T A YG
Sbjct: 86 WGTCAAYG 93


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IWSTWALYG 10
IW A+YG
Sbjct: 117 IWEILAVYG 125




65|Sequence|321|330|WALYGRAVDQ

>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WALYGR 6
W+LYGR
Sbjct: 451 WSLYGR 456


>sp|RS3A_IGNH4|SMALL ribosomal subunit protein eS1|Ignicoccus hospitalis (strain

Query: 1 WALYGRAVD 9
W L GR VD
Sbjct: 41 WKLIGRTVD 49


>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 WALYGRAV 8
W +YGR +
Sbjct: 332 WTVYGRNI 339


>sp|SUA5_PYRAB|THREONYLCARBAMOYL-AMP synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 ALYGRAVD 9
A+YG++VD
Sbjct: 216 AVYGKSVD 223


>sp|KTHY_PYRAE|PROBABLE thymidylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WALYGRAVD 9
WAL G +VD
Sbjct: 46 WALKGGSVD 54


>sp|ANTRP_HALVD|PROBABLE anion ABC transporter permease|Haloferax volcanii (strain ATCC

Query: 2 ALYGRAVDQ 10
A YGRA+ +
Sbjct: 152 AAYGRAISE 160


>sp|PYRF_METBF|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WALYGRAV 8
W + GRA+
Sbjct: 189 WVIVGRAI 196


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WALYGRAVD 9
W+LYG D
Sbjct: 416 WSLYGMYTD 424




66|Sequence|326|335|RAVDQDKVLR

>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 1 RAVDQDKVLR 10
RA+++DKVLR
Sbjct: 163 RAMERDKVLR 172


>sp|TRUD1_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 1 RAVDQDKVLR 10
RAVD+D+ L+
Sbjct: 115 RAVDKDEFLK 124


>sp|MBLFP_SULTO|METALLO-BETA-LACTAMASE fold-containing protein ST1585|Sulfurisphaera tokodaii (strain DSM

Query: 1 RAVDQDKVL 9
+ +DQDKV+
Sbjct: 117 KKLDQDKVI 125


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 RAVDQDKVLR 10
+ +D++KVLR
Sbjct: 919 KRIDEEKVLR 928


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RAVDQDKVLR 10
+ +D++KVLR
Sbjct: 919 KRIDEEKVLR 928


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 RAVDQDKV 8
RAVD+D V
Sbjct: 1170 RAVDEDDV 1177


>sp|PURA_METTP|ADENYLOSUCCINATE synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RAVDQDKVL 9
RA+D+DK++
Sbjct: 206 RALDEDKMV 214




67|Sequence|331|340|DKVLRFAQQI

>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 DKVLRFAQQI 10
DK++R+A+++
Sbjct: 111 DKIVRYAREV 120


>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 1 DKVLRF 6
DKVLRF
Sbjct: 168 DKVLRF 173




68|Sequence|336|345|FAQQIRLHHF

>sp|Y376_METTP|UPF0282 protein Mthe_0376|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FAQQIRLHHF 10
F+Q+ R H+F
Sbjct: 103 FSQKRRAHYF 112


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 AQQIRLHHF 10
AQ+ R+HH
Sbjct: 497 AQERRVHHL 505




69|Sequence|341|350|RLHHFNSSHL

>sp|RL30_METLZ|LARGE ribosomal subunit protein uL30|Methanocorpusculum labreanum

Query: 1 RLHHFN 6
RLHH N
Sbjct: 25 RLHHIN 30


>sp|RL30_METB6|LARGE ribosomal subunit protein uL30|Methanoregula boonei (strain DSM

Query: 1 RLHHFN 6
RLHH N
Sbjct: 25 RLHHIN 30


>sp|RL30_METHJ|LARGE ribosomal subunit protein uL30|Methanospirillum hungatei JF-1

Query: 1 RLHHFN 6
RLHH N
Sbjct: 25 RLHHIN 30


>sp|RL30_METMJ|LARGE ribosomal subunit protein uL30|Methanoculleus marisnigri (strain

Query: 1 RLHHFN 6
RLHH N
Sbjct: 25 RLHHVN 30




70|Sequence|346|355|NSSHLEIDDM

>sp|Y756_METJA|UNCHARACTERIZED protein MJ0756|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NSSHLEID 8
N SHLEID
Sbjct: 57 NLSHLEID 64


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NSSHLEIDDM 10
++S+LE+DDM
Sbjct: 528 DASNLEVDDM 537


>sp|SYE_METTH|GLUTAMATE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NSSHLEIDDM 10
++S LE+DD+
Sbjct: 519 DASELEVDDV 528


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 NSSHLEIDDM 10
++S LE+DD+
Sbjct: 518 DASELEVDDV 527


>sp|KCY_METB6|CYTIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 NSSHLEIDDM 10
NS H +DD+
Sbjct: 154 NSEHWGVDDL 163




71|Sequence|351|360|EIDDMYTPAY

>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EIDDMYTPA 9
E+DD YTPA
Sbjct: 3 EVDDQYTPA 11


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IDDMYTPAY 10
+DDMY P +
Sbjct: 144 LDDMYKPRW 152


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 EIDDMYTPA 9
E+D++Y+P+
Sbjct: 134 EVDEIYSPS 142


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EIDDMY 6
E+DDMY
Sbjct: 267 ELDDMY 272


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EIDDMY 6
E+DDMY
Sbjct: 267 ELDDMY 272


>sp|RL37A_THEAC|LARGE ribosomal subunit protein eL43|Thermoplasma acidophilum (strain

Query: 6 YTPAY 10
YTPAY
Sbjct: 69 YTPAY 73


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IDDMYTPAY 10
+DD+YT A+
Sbjct: 240 VDDVYTMAH 248


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 2 IDDMYTPAY 10
+DD+YT A+
Sbjct: 240 VDDVYTMAH 248


>sp|CRYD_NATPD|CRYPTOCHROME DASH|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EIDDMYTP 8
+IDD +TP
Sbjct: 148 DIDDTFTP 155


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EIDDMYTP 8
E+DD Y P
Sbjct: 6 EVDDQYDP 13




72|Sequence|356|365|YTPAYGDFDF

>sp|Y1566_METJA|UNCHARACTERIZED protein MJ1566|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YTPAYGDFDF 10
Y P +GDFD
Sbjct: 300 YPPNFGDFDL 309


>sp|TRPC_THEKO|INDOLE-3-GLYCEROL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YTPAYGDF 8
Y+P YGD
Sbjct: 24 YSPKYGDL 31


>sp|TRPC_PYRFU|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YTPAYGDF 8
Y+P YGD
Sbjct: 25 YSPKYGDL 32


>sp|TRPC_PYRAB|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 YTPAYGDF 8
Y+P YGD
Sbjct: 25 YSPKYGDL 32


>sp|Y076_METJA|UNCHARACTERIZED protein MJ0076|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 AYGDFDF 10
AYGDF F
Sbjct: 48 AYGDFSF 54


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PAYGDFDF 10
P +GD DF
Sbjct: 327 PGHGDIDF 334


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YTPAYGDFDF 10
Y P GDF F
Sbjct: 289 YQPYVGDFAF 298


>sp|RRP4_METST|EXOSOME complex component Rrp4|Methanosphaera stadtmanae (strain ATCC

Query: 1 YTPAYGDF 8
Y+P YGD
Sbjct: 58 YSPNYGDL 65


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PAYGDFDF 10
P +GD DF
Sbjct: 327 PGHGDVDF 334


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PAYGDFDF 10
P Y DFD+
Sbjct: 199 PYYKDFDY 206


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 PAYGDFDF 10
P Y DFD+
Sbjct: 202 PLYRDFDY 209


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter

Query: 3 PAYGDFDF 10
PA DFDF
Sbjct: 76 PAERDFDF 83


>sp|KHSE_PYRIL|HOMOSERINE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YTPAYG 6
Y PAYG
Sbjct: 227 YVPAYG 232


>sp|CFBD_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 5 YGDFDF 10
Y DFDF
Sbjct: 292 YSDFDF 297


>sp|ASPD_METHJ|L-ASPARTATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PAYGDF 8
PAY DF
Sbjct: 46 PAYADF 51


>sp|RRP4_ARCFU|EXOSOME complex component Rrp4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YTPAYGD 7
YTP+ GD
Sbjct: 53 YTPSVGD 59


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 TPAYGDFDF 10
TP Y FDF
Sbjct: 628 TPDYVRFDF 636


>sp|SECD_HALWD|PROTEIN-EXPORT membrane protein SecD|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PAYGD 7
PAYGD
Sbjct: 506 PAYGD 510


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 PAYGDFDF 10
P Y +FD+
Sbjct: 202 PLYAEFDY 209


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PAYGDFDF 10
P Y +FD+
Sbjct: 202 PLYAEFDY 209


>sp|RL5_CALMQ|LARGE ribosomal subunit protein uL5|Caldivirga maquilingensis (strain

Query: 1 YTPAYGDFDF 10
Y PA G F F
Sbjct: 139 YDPALGIFGF 148


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 TPAYGDFDF 10
TP G+F F
Sbjct: 382 TPVTGEFQF 390


>sp|Y2166_ARCFU|UNCHARACTERIZED protein AF_2166|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YTPAYGDFDF 10
Y P GDF F
Sbjct: 9 YYPGLGDFSF 18


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 YGDFDF 10
YGD DF
Sbjct: 245 YGDVDF 250


>sp|FOLD_METBU|BIFUNCTIONAL protein FolD|Methanococcoides burtonii (strain DSM 6242

Query: 5 YGDFDF 10
YGD DF
Sbjct: 244 YGDVDF 249


>sp|FOLD_METBF|BIFUNCTIONAL protein FolD|Methanosarcina barkeri (strain Fusaro /

Query: 5 YGDFDF 10
YGD DF
Sbjct: 245 YGDVDF 250


>sp|FOLD_METAC|BIFUNCTIONAL protein FolD|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 YGDFDF 10
YGD DF
Sbjct: 248 YGDVDF 253


>sp|SECD_HALVD|PROTEIN-EXPORT membrane protein SecD|Haloferax volcanii (strain ATCC 29605

Query: 3 PAYGD 7
PAYGD
Sbjct: 510 PAYGD 514


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PAYGDFDF 10
P Y +FD+
Sbjct: 202 PLYSEFDY 209


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 PAYGDFDF 10
P Y +FD+
Sbjct: 202 PLYSEFDY 209


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 1 YTPAYGDFDF 10
Y+PA DF F
Sbjct: 175 YSPALTDFTF 184


>sp|SODM_HALHI|SUPEROXIDE dismutase [Mn]|Haloarcula hispanica

Query: 1 YTPAYGDF 8
Y PA GDF
Sbjct: 134 YGPARGDF 141


>sp|SODM_HALMA|SUPEROXIDE dismutase [Mn]|Haloarcula marismortui (strain ATCC 43049

Query: 1 YTPAYGDF 8
Y PA GDF
Sbjct: 171 YGPARGDF 178


>sp|COFC_METST|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YTPAYGDFDF 10
Y P +G F F
Sbjct: 148 YKPLFGAFSF 157


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 YTPAYGDFDF 10
Y P Y D D
Sbjct: 346 YPPVYSDTDL 355


>sp|SODM1_HALME|SUPEROXIDE dismutase [Mn] 1|Haloferax mediterranei (Halobacterium

Query: 1 YTPAYGDF 8
Y PA GDF
Sbjct: 134 YGPARGDF 141


>sp|SODM2_HALVD|SUPEROXIDE dismutase [Mn] 2|Haloferax volcanii (strain ATCC 29605

Query: 1 YTPAYGDF 8
Y PA GDF
Sbjct: 167 YGPARGDF 174




73|Sequence|361|370|GDFDFDEVKF

>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GDFDFDEVK 9
GD DFD VK
Sbjct: 234 GDVDFDAVK 242


>sp|FOLD_METMJ|BIFUNCTIONAL protein FolD|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GDFDFDEVK 9
GD DFD VK
Sbjct: 235 GDVDFDAVK 243


>sp|AROE_SACS2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 3 FDFDEVKF 10
FD DE+KF
Sbjct: 44 FDLDEMKF 51


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 FDFDEVKF 10
FD DE+KF
Sbjct: 44 FDLDEMKF 51


>sp|AROE_SACI6|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.4 /

Query: 3 FDFDEVKF 10
FD DE+KF
Sbjct: 44 FDLDEMKF 51


>sp|AROE_SACI4|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 3 FDFDEVKF 10
FD DE+KF
Sbjct: 44 FDLDEMKF 51


>sp|AROE_SACI3|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.27)

Query: 3 FDFDEVKF 10
FD DE+KF
Sbjct: 44 FDLDEMKF 51


>sp|AROE_SACI2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain L.S.2.15

Query: 3 FDFDEVKF 10
FD DE+KF
Sbjct: 44 FDLDEMKF 51


>sp|AROE_SACI1|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 FDFDEVKF 10
FD DE+KF
Sbjct: 44 FDLDEMKF 51


>sp|FOLD_THEVO|BIFUNCTIONAL protein FolD|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GDFDFDEV 8
GD DFD+V
Sbjct: 234 GDIDFDKV 241


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GDFDFDEVK 9
G FDFD+VK
Sbjct: 143 GIFDFDKVK 151


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 1 GDFDFDEVK 9
G FDFD+VK
Sbjct: 143 GIFDFDKVK 151


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GDFDFDEVK 9
G FDFD+VK
Sbjct: 143 GIFDFDKVK 151


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FDFDEV 8
FDFDEV
Sbjct: 229 FDFDEV 234


>sp|KDGK2_HALVD|2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 1 GDFDFDEV 8
GDFDF+ V
Sbjct: 218 GDFDFETV 225


>sp|FOLD_METB6|BIFUNCTIONAL protein FolD|Methanoregula boonei (strain DSM 21154

Query: 1 GDFDFDEVK 9
GD DF+ VK
Sbjct: 236 GDVDFEAVK 244


>sp|PUS10_CENSY|TRNA pseudouridine synthase Pus10|Cenarchaeum symbiosum (strain A)

Query: 1 GDFDFDEV 8
G FDF+E+
Sbjct: 360 GGFDFEEI 367


>sp|RNP2_PYRHO|RIBONUCLEASE P protein component 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GDFDFDEVK 9
GDF DEVK
Sbjct: 27 GDFTKDEVK 35


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DFDFDEVK 9
D+D+D+VK
Sbjct: 291 DYDYDKVK 298


>sp|RTCA_SULTO|RNA 3'-terminal phosphate cyclase|Sulfurisphaera tokodaii (strain DSM

Query: 1 GDFDFD 6
GDF+FD
Sbjct: 84 GDFEFD 89


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GDFDFDEVK 9
D+D+DE K
Sbjct: 531 ADWDYDEAK 539


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 GDFDFDEVK 9
D+D+DE K
Sbjct: 530 ADWDYDEAK 538


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DFDFDEVK 9
D+D+D+VK
Sbjct: 291 DYDYDKVK 298


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DFDFDEVK 9
D+D+D+VK
Sbjct: 291 DYDYDKVK 298


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DFDFDEVK 9
D+D+D+VK
Sbjct: 291 DYDYDKVK 298


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 DFDFDEVK 9
D+D+D+VK
Sbjct: 291 DYDYDKVK 298


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DFDFDEVK 9
D+D+D+VK
Sbjct: 291 DYDYDKVK 298


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DFDFDEVK 9
D+D+D+VK
Sbjct: 291 DYDYDKVK 298


>sp|FOLD_METHJ|BIFUNCTIONAL protein FolD|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GDFDFDEVK 9
GD FDEV+
Sbjct: 234 GDVAFDEVE 242


>sp|Y1321_PYRHO|UPF0252 protein PH1321|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DFDFDEVK 9
++DFD VK
Sbjct: 189 EYDFDRVK 196


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GDFDFDEVK 9
G FDFD+VK
Sbjct: 143 GIFDFDKVK 151


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 FDFDEVKF 10
FD DEVK+
Sbjct: 643 FDPDEVKY 650


>sp|AROD_METBF|3-DEHYDROQUINATE dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GDFDFDEVK 9
G F DEVK
Sbjct: 227 GQFQVDEVK 235


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 1 GDFDFDEVKF 10
G+ ++DEV+
Sbjct: 254 GELEYDEVRL 263


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 2 DFDFDEVK 9
DF+ DE+K
Sbjct: 120 DFNIDELK 127


>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GDFDFDEVKF 10
D FDE+KF
Sbjct: 188 ADITFDELKF 197


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 GDFDFDEV 8
GDF DE+
Sbjct: 168 GDFTVDEI 175


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 1 GDFDFDEV 8
GDF DE+
Sbjct: 173 GDFTVDEI 180


>sp|Y635_METJA|UNCHARACTERIZED protein MJ0635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDFDFDEVK 9
GD+DFD+ K
Sbjct: 108 GDYDFDKFK 116


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DFDFDEVK 9
DF+FDE +
Sbjct: 134 DFNFDETQ 141


>sp|CDAT8_METKA|TRNA(CYTOSINE(8)) deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 GDFDFDEVK 9
G+FD DE++
Sbjct: 197 GEFDRDELR 205


>sp|TRM56_META3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus aeolicus

Query: 1 GDFDFDEV 8
GDF FD V
Sbjct: 56 GDFKFDVV 63


>sp|DHYS_PYRAE|PROBABLE deoxyhypusine synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GDFDFDEV 8
G FD D+V
Sbjct: 87 GSFDLDDV 94


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GDFDFDEVKF 10
G F DEV+F
Sbjct: 103 GSFHMDEVEF 112


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 GDFDFDEVK 9
GD DF+ K
Sbjct: 249 GDVDFESAK 257


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DFDFDE 7
+FDFDE
Sbjct: 890 NFDFDE 895


>sp|THIL_ARCFU|THIAMINE-MONOPHOSPHATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDFDFDEV 8
GD DF E+
Sbjct: 120 GDIDFSEI 127


>sp|Y856_METTH|METALLOPROTEASE MTH_856|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GDFDFDEV 8
GD FDE+
Sbjct: 347 GDLSFDEL 354


>sp|KDGK1_HALVD|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 1 GDFDFDEVK 9
G+FD D V+
Sbjct: 120 GEFDLDAVR 128


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GDFDFDEVKF 10
GD + D VKF
Sbjct: 781 GDVEKDRVKF 790


>sp|Y1118_PICTO|UPF0173 metal-dependent hydrolase PTO1118|Picrophilus torridus (strain

Query: 1 GDFDFDEVK 9
G DFD++K
Sbjct: 90 GTVDFDDIK 98




74|Sequence|366|375|DEVKFPNASD

>sp|RL6_METTH|LARGE ribosomal subunit protein uL6|Methanothermobacter

Query: 2 EVKFPNASD 10
EVKFP D
Sbjct: 55 EVKFPKKKD 63


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 DEVKFPNASD 10
DEV+ P A+D
Sbjct: 43 DEVEIPLAAD 52


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 DEVKFPNASD 10
DEV+ P A+D
Sbjct: 36 DEVEIPIAND 45


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EVKFPNASD 10
EV+ PN +D
Sbjct: 589 EVRIPNTAD 597




75|Sequence|371|380|PNASDMFRRL

>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 PNASDMFRR 9
PN DM RR
Sbjct: 992 PNVIDMMRR 1000


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain Fusaro

Query: 1 PNASDMFRR 9
PN DM RR
Sbjct: 993 PNVIDMMRR 1001


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 1 PNASDMFRR 9
PN DM RR
Sbjct: 316 PNVIDMMRR 324


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 PNASDMFRR 9
PN DM RR
Sbjct: 992 PNVIDMMRR 1000


>sp|KCY_METTP|CYTIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 NASDMFRRL 10
N+ D+FRR+
Sbjct: 30 NSGDLFRRI 38


>sp|NDK_IGNH4|NUCLEOSIDE diphosphate kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PNASDMFRRL 10
PNA ++ RR+
Sbjct: 78 PNAVEVMRRM 87


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain

Query: 1 PNASDMFRR 9
PN SD+F +
Sbjct: 59 PNLSDIFNQ 67




76|Sequence|376|385|MFRRLRDAGF

>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 FRRLRDAG 9
FRRLRD G
Sbjct: 200 FRRLRDVG 207


>sp|RADA_METST|DNA repair and recombination protein|Methanosphaera stadtmanae

Query: 3 RRLRDAGF 10
++LRDAGF
Sbjct: 16 QKLRDAGF 23


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 MFRRLRDAG 9
+ RR+RDAG
Sbjct: 381 VIRRMRDAG 389


>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FRRLRDAG 9
FR+LRD G
Sbjct: 204 FRKLRDQG 211


>sp|RADA_METLZ|DNA repair and recombination protein|Methanocorpusculum labreanum

Query: 4 RLRDAGF 10
RLRDAG+
Sbjct: 19 RLRDAGY 25


>sp|RADA_METS3|DNA repair and recombination protein|Methanobrevibacter smithii

Query: 4 RLRDAGF 10
+LRDAGF
Sbjct: 17 KLRDAGF 23


>sp|RADA_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 3 RRLRDAGF 10
++LRDAGF
Sbjct: 16 QKLRDAGF 23


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 FRRLRDAG 9
F++LRD+G
Sbjct: 190 FKKLRDSG 197


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 FRRLRDAGF 10
FR+L++ GF
Sbjct: 162 FRKLKEKGF 170


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 2 FRRLRDAG 9
F RLRD+G
Sbjct: 44 FERLRDSG 51


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 MFRRLRDAGF 10
+FR+L+ AGF
Sbjct: 494 IFRKLQKAGF 503


>sp|HIS6_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 2 FRRLRDAG 9
FR +RDAG
Sbjct: 23 FRNIRDAG 30


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RRLRDAGF 10
R L+DAGF
Sbjct: 212 RYLKDAGF 219


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 FRRLRDAG 9
FR LRD G
Sbjct: 203 FRELRDKG 210


>sp|Y1544_METJA|UNCHARACTERIZED protein MJ1544|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RRLRDAGF 10
RRL D+GF
Sbjct: 129 RRLNDSGF 136


>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 FRRLRDAGF 10
R L+DAGF
Sbjct: 53 LRELQDAGF 61


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 MFRRLRDAGF 10
+F RLR+ GF
Sbjct: 172 VFERLREQGF 181


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 3 RRLRDAGF 10
R+LR+AG+
Sbjct: 26 RKLREAGY 33


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FRRLRDAGF 10
FR+L++ GF
Sbjct: 157 FRKLQEKGF 165


>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 LRDAGF 10
LRDAGF
Sbjct: 55 LRDAGF 60


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 LRDAGF 10
LRDAGF
Sbjct: 319 LRDAGF 324


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FRRLRDAG 9
FR LRD G
Sbjct: 202 FRELRDKG 209


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 3 RRLRDAGF 10
RRLRD G
Sbjct: 943 RRLRDLGL 950


>sp|RADA_METBU|DNA repair and recombination protein|Methanococcoides burtonii

Query: 3 RRLRDAGF 10
++L+DAGF
Sbjct: 18 QKLKDAGF 25


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 MFRRLRDAGF 10
+ RLRD G+
Sbjct: 334 LLNRLRDKGY 343


>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 RRLRDAGF 10
RRL +AGF
Sbjct: 180 RRLSEAGF 187


>sp|GATA_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Natronomonas pharaonis (strain ATCC

Query: 4 RLRDAG 9
RLRDAG
Sbjct: 59 RLRDAG 64


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 MFRRLRDAG 9
+ +RL+DAG
Sbjct: 184 VLKRLKDAG 192


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 FRRLRDAG 9
FRR RD G
Sbjct: 194 FRRYRDEG 201


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MFRRLRDAGF 10
+F+ LR+ GF
Sbjct: 303 LFKWLRECGF 312


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 RRLRDAGF 10
RRL D GF
Sbjct: 213 RRLGDGGF 220


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FRRLRDAG 9
F+R+RDA
Sbjct: 50 FKRIRDAA 57


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 FRRLRDAGF 10
F+RL +AG+
Sbjct: 111 FKRLYEAGY 119


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FRRLRDAG 9
FR LRD G
Sbjct: 204 FRELRDKG 211


>sp|TRM1_HALMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloarcula marismortui

Query: 4 RLRDAGF 10
+LRDAG+
Sbjct: 334 KLRDAGY 340


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 FRRLRDAG 9
FR LRD G
Sbjct: 203 FRELRDNG 210


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RRLRDAGF 10
RRL D GF
Sbjct: 216 RRLGDGGF 223


>sp|PDXS_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum calidifontis

Query: 4 RLRDAGF 10
RLR+AGF
Sbjct: 26 RLREAGF 32


>sp|COFC_HALLT|2-PHOSPHO-L-LACTATE guanylyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 RRLRDAGF 10
R LRDAGF
Sbjct: 196 RWLRDAGF 203


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 FRRLRDAG 9
+RRLR+AG
Sbjct: 208 WRRLRNAG 215


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 MFRRLRDAGF 10
+FR+L+ GF
Sbjct: 495 LFRKLQKEGF 504


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 MFRRLRDAGF 10
+++ LR+ GF
Sbjct: 300 LYKHLRECGF 309


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 RRLRDAGF 10
RR+ +AGF
Sbjct: 521 RRIEEAGF 528


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 1 MFRRLRDAG 9
+FR +DAG
Sbjct: 316 LFRAFKDAG 324


>sp|HJC_SULAC|CROSSOVER junction endodeoxyribonuclease Hjc|Sulfolobus acidocaldarius

Query: 1 MFRRLRDAGF 10
+ RLRD GF
Sbjct: 14 LVSRLRDKGF 23


>sp|HJC_SULTO|CROSSOVER junction endodeoxyribonuclease Hjc|Sulfurisphaera tokodaii

Query: 4 RLRDAGF 10
RLRD GF
Sbjct: 18 RLRDKGF 24


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 4 RLRDAG 9
RLRDAG
Sbjct: 447 RLRDAG 452


>sp|HJC_SACS2|CROSSOVER junction endodeoxyribonuclease Hjc|Saccharolobus solfataricus

Query: 4 RLRDAGF 10
RLRD GF
Sbjct: 18 RLRDKGF 24




77|Sequence|381|390|RDAGFRVTLW

>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RDAGFRVTL 9
RDAGF VT+
Sbjct: 56 RDAGFEVTV 64


>sp|Y1261_METTH|UPF0104 membrane protein MTH_1261|Methanothermobacter thermautotrophicus

Query: 1 RDAGFRVTLW 10
RDAG R+T W
Sbjct: 175 RDAGERITGW 184


>sp|SYY_METST|TYROSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RDAGFRVTLW 10
+DAGF++T++
Sbjct: 59 QDAGFKITIF 68


>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RDAGFRVTL 9
+DAGFRV +
Sbjct: 57 QDAGFRVKI 65


>sp|PGP_PYRNV|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RDAGFRVTL 9
RDAG RV L
Sbjct: 35 RDAGIRVVL 43


>sp|PGP_PYRAE|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RDAGFRVTL 9
RDAG RV L
Sbjct: 35 RDAGIRVVL 43


>sp|CAS1_HYPBU|CRISPR-ASSOCIATED endonuclease Cas1|Hyperthermus butylicus (strain DSM 5456

Query: 1 RDAGFRV 7
RDAG+RV
Sbjct: 134 RDAGYRV 140


>sp|PGP_PYRIL|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RDAGFRVTL 9
RD+G RV L
Sbjct: 35 RDSGLRVVL 43


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RDAGFRVTL 9
RDAG RV L
Sbjct: 315 RDAGIRVYL 323


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DAGFRV 7
DAGFRV
Sbjct: 169 DAGFRV 174


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DAGFRV 7
DAGFRV
Sbjct: 41 DAGFRV 46


>sp|PUR8_ARCFU|ADENYLOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GFRVTLW 10
GFR LW
Sbjct: 155 GFRFALW 161


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 3 AGFRVTLW 10
AG R TLW
Sbjct: 7 AGIRGTLW 14


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 1 RDAGFRV 7
+DAGFR+
Sbjct: 118 KDAGFRL 124


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RDAGFRVTL 9
+DAGF++ +
Sbjct: 215 KDAGFKIIM 223


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GFRVTL 9
GFRVTL
Sbjct: 402 GFRVTL 407


>sp|AROC_METVS|CHORISMATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 5 FRVTLW 10
FRVT W
Sbjct: 9 FRVTTW 14


>sp|AROC_METMP|CHORISMATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 5 FRVTLW 10
FRVT W
Sbjct: 8 FRVTTW 13


>sp|AROC_METM7|CHORISMATE synthase|Methanococcus maripaludis (strain C7 /

Query: 5 FRVTLW 10
FRVT W
Sbjct: 8 FRVTTW 13


>sp|AROC_METM5|CHORISMATE synthase|Methanococcus maripaludis (strain C5 /

Query: 5 FRVTLW 10
FRVT W
Sbjct: 8 FRVTTW 13


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RDAGFRVTL 9
R+AGFRV +
Sbjct: 322 REAGFRVHV 330


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 1 RDAGFRVTL 9
RD G+ VTL
Sbjct: 321 RDQGYDVTL 329


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DAGFRVTLW 10
D F+V LW
Sbjct: 292 DPAFKVNLW 300


>sp|R15PI_ARCFU|RIBOSE 1,5-bisphosphate isomerase|Archaeoglobus fulgidus (strain ATCC

Query: 1 RDAGFRVTL 9
R+AG VTL
Sbjct: 161 REAGIEVTL 169


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 5 FRVTLW 10
FRVT W
Sbjct: 8 FRVTTW 13


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 DAGFRVTL 9
DAG+RV +
Sbjct: 92 DAGYRVAI 99


>sp|SYP_THEPD|PROLINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 RDAGFRVTL 9
R+AG+RV L
Sbjct: 319 REAGYRVYL 327


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 FRVTLW 10
FRVT W
Sbjct: 11 FRVTTW 16


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RDAGFRVTLW 10
RD+G + +W
Sbjct: 437 RDSGIPIPVW 446




78|Sequence|386|395|RVTLWVHPFV

>sp|Y1409_METJA|UNCHARACTERIZED protein MJ1409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVTLWVHP 8
R+ +W+HP
Sbjct: 185 RIIIWIHP 192


>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 1 RVTLWVHPFV 10
R+TLW P V
Sbjct: 266 RLTLWTAPAV 275


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LWVHP 8
+WVHP
Sbjct: 158 IWVHP 162


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LWVHP 8
+WVHP
Sbjct: 158 IWVHP 162


>sp|RL10E_NATPD|LARGE ribosomal subunit protein uL16|Natronomonas pharaonis (strain ATCC

Query: 3 TLWVHP 8
T+W HP
Sbjct: 138 TIWCHP 143


>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 5 WVHPF 9
W+HP+
Sbjct: 182 WIHPY 186


>sp|YPZ4_METTF|UNCHARACTERIZED protein ORF4'|Methanothermobacter thermautotrophicus

Query: 5 WVHPF 9
W+HP+
Sbjct: 179 WIHPY 183


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LWVHP 8
LWVHP
Sbjct: 234 LWVHP 238


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 5 WVHP 8
WVHP
Sbjct: 105 WVHP 108


>sp|ARSM_HALSA|ARSENITE methyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 4 LWVHP 8
LW HP
Sbjct: 3 LWTHP 7


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 5 WVHPFV 10
W+ PFV
Sbjct: 324 WIDPFV 329


>sp|SYDND_METST|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RVTLWVH 7
+VT WVH
Sbjct: 27 KVTGWVH 33


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 5 WVHPFV 10
W+ PFV
Sbjct: 726 WIKPFV 731


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 5 WVHPFV 10
W+HP V
Sbjct: 323 WIHPDV 328


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VTLWVHPF 9
V LWVH +
Sbjct: 124 VKLWVHDY 131


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 LWVHPFV 10
+WVH F+
Sbjct: 354 IWVHEFL 360


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LWVHPFV 10
+WVH F+
Sbjct: 353 IWVHEFL 359


>sp|RL10E_METJA|LARGE ribosomal subunit protein uL16|Methanocaldococcus jannaschii

Query: 2 VTLWVHP 8
+T+WV+P
Sbjct: 134 LTVWVNP 140


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LWVHPFV 10
+WVH F+
Sbjct: 354 IWVHEFL 360


>sp|NEP1_STAMF|RIBOSOMAL RNA small subunit methyltransferase|Staphylothermus marinus

Query: 4 LWVHPFV 10
LW HP V
Sbjct: 23 LWKHPAV 29


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 LWVHPFV 10
+WVH F+
Sbjct: 353 IWVHEFL 359


>sp|MTRC_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanopyrus kandleri (strain AV19

Query: 5 WVHPFV 10
WVHP +
Sbjct: 47 WVHPLI 52


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VTLWVH 7
VT WVH
Sbjct: 251 VTYWVH 256


>sp|NEP1_AERPE|RIBOSOMAL RNA small subunit methyltransferase|Aeropyrum pernix (strain ATCC

Query: 3 TLWVHPFV 10
+LW HP V
Sbjct: 16 SLWSHPQV 23




79|Sequence|391|400|VHPFVNYNSS

>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 3 PFVNYNSS 10
PF N+NSS
Sbjct: 140 PFANHNSS 147


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 3 PFVNYNSS 10
PF N+NSS
Sbjct: 140 PFANHNSS 147


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 VHPFVNYN 8
VHP N+N
Sbjct: 477 VHPLTNFN 484


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 VHPFVNY 7
VH F+NY
Sbjct: 91 VHDFINY 97


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 1 VHPFVNY 7
VH F+NY
Sbjct: 92 VHDFINY 98


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 VHPFVNY 7
VH F+NY
Sbjct: 91 VHDFINY 97


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 VHPFVNY 7
VH F+NY
Sbjct: 91 VHDFINY 97


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 1 VHPFVNY 7
VH F+NY
Sbjct: 91 VHDFINY 97


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 VHPFVNY 7
VH F+NY
Sbjct: 91 VHDFINY 97


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 2 HPFVNYN 8
HP++N N
Sbjct: 104 HPYINAN 110


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 2 HPFVNYN 8
HP N+N
Sbjct: 478 HPLTNFN 484


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 HPFVNYN 8
HP N+N
Sbjct: 478 HPLTNFN 484


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 2 HPFVNYN 8
HP N+N
Sbjct: 478 HPLTNFN 484


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 2 HPFVNYN 8
HP N+N
Sbjct: 478 HPLTNFN 484


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VHPFVNYNS 9
+ P++NY++
Sbjct: 40 IDPYINYDA 48


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VHPFVNYNS 9
+ P++NY++
Sbjct: 40 IDPYINYDA 48


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VHPFVNYNS 9
+ P++NY++
Sbjct: 40 IDPYINYDA 48


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VHPFVNYNS 9
+ P++NY++
Sbjct: 39 IDPYINYDA 47


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VHPFVNYNS 9
+ P++NY++
Sbjct: 39 IDPYINYDA 47


>sp|Y1383_METJA|UNCHARACTERIZED protein MJ1383|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VHPFVNYNS 9
+ ++NYNS
Sbjct: 86 IKSYINYNS 94


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 VHPFVNY 7
+H F+NY
Sbjct: 89 IHEFLNY 95


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 VHPFVNY 7
+H F+NY
Sbjct: 382 IHEFLNY 388


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 VHPFVNYNSS 10
+HP +N N S
Sbjct: 157 MHPMINVNDS 166


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VHPFVNY 7
VHP+V Y
Sbjct: 246 VHPWVRY 252


>sp|FLAB3_METVO|FLAGELLIN B3|Methanococcus voltae

Query: 2 HPFVNY 7
HP VNY
Sbjct: 180 HPTVNY 185


>sp|Y1497_METJA|UNCHARACTERIZED metallohydrolase MJ1497|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VHPFVNYNSS 10
+H F+N N+S
Sbjct: 98 IHAFLNSNNS 107


>sp|TRPB_DESA1|TRYPTOPHAN synthase beta chain|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 HPFVNYN 8
+PF+ YN
Sbjct: 275 YPFIGYN 281




80|Sequence|396|405|NYNSSRFGEG

>sp|EF1A_PYRWO|ELONGATION factor 1-alpha|Pyrococcus woesei

Query: 1 NYNSSRFGE 9
NYN RF E
Sbjct: 152 NYNQKRFEE 160


>sp|EF1A_PYRFU|ELONGATION factor 1-alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NYNSSRFGE 9
NYN RF E
Sbjct: 150 NYNQKRFEE 158


>sp|TOP6A_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 2 YNSSRFGEG 10
+N+SR G G
Sbjct: 172 FNASRLGSG 180


>sp|CAS7_METJA|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YNSSRFGE 9
YN +RFG+
Sbjct: 83 YNGARFGQ 90


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 1 NYNSSRFGEG 10
NY+ S GEG
Sbjct: 162 NYSGSARGEG 171




81|Sequence|401|410|RFGEGVEREL

>sp|Y1321_PYRHO|UPF0252 protein PH1321|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RFGEGVEREL 10
R+GE +E+EL
Sbjct: 68 RYGEALEKEL 77


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FGEGVEREL 10
FG GV RE+
Sbjct: 589 FGRGVRREI 597


>sp|FTR_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 FGEGVEREL 10
FG+G E+EL
Sbjct: 124 FGDGYEKEL 132


>sp|HMAT_HALSA|HEME-BASED aerotactic transducer HemAT|Halobacterium salinarum (strain ATCC

Query: 1 RFGEGVER 8
R GEGVER
Sbjct: 400 RIGEGVER 407


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FGEGVER 8
FGEGV+R
Sbjct: 830 FGEGVKR 836


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RFGEGVE 7
+FGEG+E
Sbjct: 111 KFGEGIE 117


>sp|Y1071_METJA|UNCHARACTERIZED protein MJ1071|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FGEGVE 7
FGEG+E
Sbjct: 229 FGEGIE 234


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FGEGVE 7
FGEGVE
Sbjct: 268 FGEGVE 273


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GEGVER 8
GEGVER
Sbjct: 292 GEGVER 297


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC

Query: 2 FGEGVER 8
FGEG E+
Sbjct: 66 FGEGAEK 72


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 2 FGEGVER 8
FGEG E+
Sbjct: 66 FGEGTEK 72


>sp|G3PP_PYRHO|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RFGEGVEREL 10
R+G+ EREL
Sbjct: 195 RYGKHSEREL 204


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 4 EGVEREL 10
+G+EREL
Sbjct: 358 DGIEREL 364


>sp|RS14Z_SULAC|SMALL ribosomal subunit protein uS14|Sulfolobus acidocaldarius (strain

Query: 1 RFGEGVE 7
RFG+GV+
Sbjct: 11 RFGKGVQ 17




82|Sequence|406|415|VERELFVREP

>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 ELFVREP 10
E+FVREP
Sbjct: 194 EIFVREP 200


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 RELFVREP 10
REL+VR+P
Sbjct: 713 RELYVRDP 720


>sp|LEUC_SULAC|3-ISOPROPYLMALATE dehydratase large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 4 ELFVREP 10
E+FV+EP
Sbjct: 194 EIFVKEP 200


>sp|AROK_METTH|SHIKIMATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VERELFVREP 10
+ER + +REP
Sbjct: 157 MERRIILREP 166


>sp|PIMT_KORCO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 VERELFVRE 9
V+RELFV E
Sbjct: 28 VKRELFVPE 36


>sp|Y021_PYRIL|UPF0282 protein Pisl_0021|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RELFVREP 10
REL+ +EP
Sbjct: 285 RELYAKEP 292


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RELFVREP 10
RELF ++P
Sbjct: 455 RELFTKDP 462


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 2 ERELFVREP 10
+ E+FVR+P
Sbjct: 130 QAEMFVRKP 138


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VERELFVRE 9
V RELF+++
Sbjct: 351 VTRELFIKQ 359




83|Sequence|411|420|FVREPTGRLP

>sp|HEM1_ARCFU|GLUTAMYL-TRNA reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FVREPTGRL 9
F+REPT RL
Sbjct: 379 FLREPTVRL 387


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 FVREPTGRLP 10
+VR TGR P
Sbjct: 164 YVRRKTGRAP 173


>sp|NADE_METMA|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FVREPTGR 8
F+R+ TGR
Sbjct: 13 FIRDETGR 20


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FVREPTGRL 9
VR+ TGRL
Sbjct: 38 IVRDATGRL 46


>sp|CSM3_METTH|CRISPR system Cms endoribonuclease Csm3|Methanothermobacter

Query: 1 FVREPTGRLP 10
+R+P RLP
Sbjct: 37 IIRDPVTRLP 46




84|Sequence|416|425|TGRLPALVRW

>sp|SPSS1_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 TGRLPALV 8
TG+LPAL+
Sbjct: 218 TGKLPALI 225


>sp|Y1674_METAR|UPF0280 protein UNCMA_16740|Methanocella arvoryzae (strain DSM 22066

Query: 2 GRLPALVR 9
GRLP +VR
Sbjct: 226 GRLPKIVR 233


>sp|RL24E_METS3|LARGE ribosomal subunit protein eL24|Methanobrevibacter smithii (strain

Query: 2 GRLPALVRW 10
GR+P V+W
Sbjct: 42 GRVPRKVKW 50


>sp|RL24E_METTH|LARGE ribosomal subunit protein eL24|Methanothermobacter

Query: 2 GRLPALVRW 10
GR+P V+W
Sbjct: 42 GRVPRKVKW 50


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 558 RFPRFIRW 565


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 558 RFPRFIRW 565


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 558 RFPRFIRW 565


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 558 RFPRFIRW 565


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 558 RFPRFIRW 565


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 558 RFPRFIRW 565


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 558 RFPRFIRW 565


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 558 RFPRFIRW 565


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 558 RFPRFIRW 565


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 558 RFPRFIRW 565


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 556 RFPRFIRW 563


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 558 RFPRFIRW 565


>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GRLPALVRW 10
G LPAL+ W
Sbjct: 337 GALPALIGW 345


>sp|SPSS2_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanoregula boonei (strain DSM 21154

Query: 1 TGRLPALV 8
TG+LP LV
Sbjct: 212 TGKLPVLV 219


>sp|COXX_HALS3|PROTOHEME IX farnesyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GRLPALVRW 10
G LPAL+ W
Sbjct: 317 GALPALIGW 325


>sp|COXX_HALSA|PROTOHEME IX farnesyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GRLPALVRW 10
G LPAL+ W
Sbjct: 300 GALPALIGW 308


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 3 RLPALVR 9
+LPALVR
Sbjct: 501 KLPALVR 507


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GRLPALVRW 10
G LPAL+ W
Sbjct: 321 GALPALIGW 329


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 563 RFPRFIRW 570


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 TGRLPALV 8
TG+LP L+
Sbjct: 220 TGKLPVLI 227


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 562 RFPRFIRW 569


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 557 RFPRFIRW 564


>sp|SYT_METKA|THREONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 GRLPALVRW 10
G+LP L W
Sbjct: 493 GKLPTLPTW 501


>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 TGRLPALVR 9
TG +P +VR
Sbjct: 261 TGNIPVIVR 269


>sp|RRP41_HYPBU|EXOSOME complex component Rrp41|Hyperthermus butylicus (strain DSM 5456

Query: 1 TGRLPALVRW 10
G P L+RW
Sbjct: 5 AGEKPTLIRW 14


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 RLPALVRW 10
R P +RW
Sbjct: 566 RFPRFIRW 573


>sp|RL24E_THEVO|LARGE ribosomal subunit protein eL24|Thermoplasma volcanium (strain

Query: 3 RLPALVRW 10
R+P VRW
Sbjct: 45 RVPRYVRW 52


>sp|RL24E_METMA|LARGE ribosomal subunit protein eL24|Methanosarcina mazei (strain ATCC

Query: 2 GRLPALVRW 10
GRLP W
Sbjct: 43 GRLPRRTEW 51


>sp|RL24E_METAC|LARGE ribosomal subunit protein eL24|Methanosarcina acetivorans (strain

Query: 2 GRLPALVRW 10
GRLP W
Sbjct: 43 GRLPRRTEW 51


>sp|COXX2_NATPD|PROTOHEME IX farnesyltransferase 2|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GRLPALVRW 10
G LPA++ W
Sbjct: 291 GALPAVIGW 299


>sp|CAS1_THEPD|CRISPR-ASSOCIATED endonuclease Cas1|Thermofilum pendens (strain DSM 2475

Query: 2 GRLPAL 7
GRLPAL
Sbjct: 121 GRLPAL 126


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GRLPALVRW 10
G LP + RW
Sbjct: 53 GCLPGIYRW 61




85|Sequence|421|430|ALVRWWNGIG

>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WWNGI 9
WWNG+
Sbjct: 697 WWNGL 701


>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 1 ALVRWWNGI 9
L RWWN +
Sbjct: 40 GLWRWWNRV 48


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 5 WWNGI 9
WW+GI
Sbjct: 453 WWDGI 457


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 5 WWNGI 9
WW+GI
Sbjct: 71 WWDGI 75


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 1 ALVRWWNGI 9
A +RW NG+
Sbjct: 18 AQIRWRNGV 26


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 ALVRWW 6
AL RWW
Sbjct: 314 ALARWW 319


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 4 RWWNGIG 10
R+W G+G
Sbjct: 340 RFWGGVG 346


>sp|BAX1_SULTO|ENDONUCLEASE Bax1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LVRWWN 7
L+RW+N
Sbjct: 141 LIRWYN 146


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 3 VRWWNGI 9
++WWN +
Sbjct: 279 MKWWNDL 285


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 3 VRWWNGI 9
++WWN +
Sbjct: 278 MKWWNDL 284


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 3 VRWWNGI 9
++WWN +
Sbjct: 284 MKWWNDL 290


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 3 VRWWNGI 9
++WWN +
Sbjct: 284 MKWWNDL 290


>sp|HIS7_METKA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 2 LVRWWN 7
+VRWW+
Sbjct: 158 VVRWWD 163


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LVRWWNG 8
+VRW NG
Sbjct: 479 IVRWKNG 485


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 WWNGIG 10
+WNG+G
Sbjct: 344 YWNGMG 349


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 5 WWNGIG 10
+WNG+G
Sbjct: 344 YWNGMG 349


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 5 WWNGIG 10
+WNG+G
Sbjct: 349 YWNGMG 354


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ALVRWWN 7
++ WWN
Sbjct: 440 SITNWWN 446


>sp|SRP19_METKA|SIGNAL recognition particle 19 kDa|Methanopyrus kandleri (strain AV19 /

Query: 4 RWWNGIG 10
RWW+ G
Sbjct: 70 RWWDDKG 76


>sp|THYX_PYRHO|FLAVIN-DEPENDENT thymidylate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ALVRWWNG 8
AL+ +W+G
Sbjct: 21 ALISYWDG 28




86|Sequence|426|435|WNGIGAVLDF

>sp|FLAB5_PYRHO|FLAGELLIN B5|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NGIGAVLDF 10
NG G V+DF
Sbjct: 233 NGAGGVIDF 241


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 WNGIGAVLD 9
+ G+GA+LD
Sbjct: 29 YEGVGALLD 37


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NGIGAVLD 9
NG+GA++D
Sbjct: 267 NGLGAIVD 274


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NGIGAVLD 9
NG+GA++D
Sbjct: 267 NGLGAIVD 274


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NGIGAVLD 9
NG+GA++D
Sbjct: 267 NGLGAIVD 274


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 2 NGIGAVLD 9
NG+GA++D
Sbjct: 267 NGLGAIVD 274


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NGIGAVLD 9
NG+GA++D
Sbjct: 267 NGLGAIVD 274


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 NGIGAVLD 9
NG+GA++D
Sbjct: 267 NGLGAIVD 274


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 3 GIGAVLDF 10
G+G V+DF
Sbjct: 187 GLGEVMDF 194


>sp|FLAB5_THEKO|FLAGELLIN B5|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NGIGAVLDF 10
NG G V+DF
Sbjct: 253 NGAGGVIDF 261


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 WNGIGA 6
W GIGA
Sbjct: 323 WRGIGA 328


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 3 GIGAVLDF 10
+GAVLD+
Sbjct: 263 AVGAVLDY 270


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 2 NGIGAVLDF 10
NG+ A+LD
Sbjct: 431 NGVEAILDL 439


>sp|Y2251_ARCFU|PROTEIN AF_2251|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WNGIGAVLDF 10
WN +GA F
Sbjct: 123 WNDVGAAPAF 132


>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 3 GIGAVLD 9
G+GAV+D
Sbjct: 227 GVGAVVD 233


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 WNGIGAVLDF 10
+ G+GA+L F
Sbjct: 406 FGGLGAILRF 415


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WNGIGAVLDF 10
+ G+GA+L F
Sbjct: 406 FGGLGAILRF 415


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 WNGIGAVLDF 10
+ G+GA+L F
Sbjct: 403 FGGLGAILRF 412


>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 2 NGIGAVL 8
NG+GA+L
Sbjct: 266 NGVGALL 272


>sp|CETZ2_HALVD|TUBULIN-LIKE protein CetZ2|Haloferax volcanii (strain ATCC 29605

Query: 3 GIGAVLD 9
G GAVLD
Sbjct: 27 GFGAVLD 33


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 2 NGIGAVLDF 10
NG+GAV++
Sbjct: 266 NGLGAVVNL 274


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NGIGAVLDF 10
+G+GAVL F
Sbjct: 342 SGVGAVLVF 350


>sp|CBIM_METJA|PUTATIVE cobalt transport protein CbiM|Methanocaldococcus jannaschii

Query: 2 NGIGAVL 8
NG+GAVL
Sbjct: 73 NGLGAVL 79




87|Sequence|431|440|AVLDFTHPKA

>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VLDFTHPK 9
V DFTHP+
Sbjct: 522 VFDFTHPR 529


>sp|RNP2_META3|RIBONUCLEASE P protein component 2|Methanococcus aeolicus (strain ATCC

Query: 2 VLDFTHPKA 10
++D+THPK
Sbjct: 55 LIDYTHPKG 63


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 2 VLDFTHPK 9
+LD THPK
Sbjct: 699 ILDATHPK 706


>sp|DAPB_NATPD|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AVLDFTHPKA 10
AV+DFT P+A
Sbjct: 57 AVIDFTVPEA 66


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 LDFTHPKA 10
DFTH KA
Sbjct: 634 FDFTHHKA 641


>sp|Y906_METJA|UNCHARACTERIZED protein MJ0906|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AVLDFTHPK 9
A++ ++HPK
Sbjct: 158 ALISYSHPK 166


>sp|CFBE_METBF|COENZYME F(430) synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AVLDFTH 7
AVLD TH
Sbjct: 9 AVLDLTH 15


>sp|CFBE_METAC|COENZYME F(430) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AVLDFTH 7
AVLD TH
Sbjct: 9 AVLDLTH 15


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 VLDFTHPK 9
V DFT P+
Sbjct: 522 VFDFTEPR 529


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LDFTHPKA 10
LD TH KA
Sbjct: 636 LDITHHKA 643


>sp|BIOB_NATPD|BIOTIN synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AVLDFTHPKA 10
AV F HP+A
Sbjct: 268 AVYRFLHPEA 277


>sp|DHSD_THEAC|SUCCINATE dehydrogenase hydrophobic membrane anchor|Thermoplasma

Query: 1 AVLDFTHPKA 10
A +DF HP A
Sbjct: 35 AHIDFGHPVA 44




88|Sequence|436|445|THPKARDWFQ

>sp|NDK_PYRAB|NUCLEOSIDE diphosphate kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 HPKARDWF 9
+P+A DWF
Sbjct: 147 YPRAEDWF 154


>sp|IF2P_METMA|PROBABLE translation initiation factor IF-2|Methanosarcina mazei (strain

Query: 2 HPKARDWFQ 10
HP ARD+ Q
Sbjct: 415 HPDARDFLQ 423


>sp|IF2P_METBF|PROBABLE translation initiation factor IF-2|Methanosarcina barkeri (strain

Query: 2 HPKARDWFQ 10
HP ARD+ Q
Sbjct: 415 HPDARDFLQ 423


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 2 HPKARDWFQ 10
HP ARD+ Q
Sbjct: 421 HPDARDFLQ 429


>sp|NDK_PYRHO|NUCLEOSIDE diphosphate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HPKARDWF 9
+P+A DWF
Sbjct: 145 YPRAADWF 152


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HPKARDWFQ 10
HPK ++W +
Sbjct: 286 HPKLKEWLE 294


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 HPKARDWFQ 10
HPK ++W +
Sbjct: 286 HPKLKEWLE 294


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 2 HPKARDWFQ 10
HPK ++W +
Sbjct: 286 HPKLKEWLE 294


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 2 HPKARDWFQ 10
HPK ++W +
Sbjct: 286 HPKLKEWLE 294


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 2 HPKARDWFQ 10
HPK ++W +
Sbjct: 286 HPKLKEWLE 294


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HPKARDWFQ 10
HPK ++W +
Sbjct: 288 HPKLKEWLE 296


>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HPKARDW 8
HPK R W
Sbjct: 392 HPKMRKW 398


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 HPKARDW 8
HPK RD+
Sbjct: 176 HPKGRDY 182


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HPKARDW 8
HPK RD+
Sbjct: 176 HPKGRDY 182


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 2 HPKARDW 8
HPK RD+
Sbjct: 176 HPKGRDY 182


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 ARDWFQ 10
ARDW+Q
Sbjct: 445 ARDWYQ 450


>sp|RL39_METLZ|LARGE ribosomal subunit protein eL39|Methanocorpusculum labreanum

Query: 1 THPKARDW 8
+HPK R+W
Sbjct: 36 SHPKRRNW 43


>sp|RL39_PYRHO|LARGE ribosomal subunit protein eL39|Pyrococcus horikoshii (strain ATCC

Query: 1 THPKARDW 8
THPK R W
Sbjct: 37 THPKRRHW 44


>sp|RL39_PYRAB|LARGE ribosomal subunit protein eL39|Pyrococcus abyssi (strain GE5 /

Query: 1 THPKARDW 8
THPK R W
Sbjct: 37 THPKRRHW 44


>sp|RL39_THEGJ|LARGE ribosomal subunit protein eL39|Thermococcus gammatolerans (strain

Query: 1 THPKARDW 8
THPK R W
Sbjct: 37 THPKRRHW 44


>sp|RL39_THEKO|LARGE ribosomal subunit protein eL39|Thermococcus kodakarensis (strain

Query: 1 THPKARDW 8
THPK R W
Sbjct: 37 THPKRRHW 44


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 4 KARDWFQ 10
K RDWF+
Sbjct: 293 KVRDWFE 299


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 3 PKARDWFQ 10
PKA+D+F+
Sbjct: 306 PKAQDYFK 313


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HPKARDWFQ 10
HP+ + WF+
Sbjct: 969 HPETKIWFR 977


>sp|RL39_THEON|LARGE ribosomal subunit protein eL39|Thermococcus onnurineus (strain

Query: 1 THPKARDW 8
THPK R W
Sbjct: 37 THPKRRMW 44


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 1 THPKARDWF 9
T+P RD+F
Sbjct: 702 TNPSGRDFF 710


>sp|IF6_HALWD|TRANSLATION initiation factor 6|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HPKARD 7
HPKAR+
Sbjct: 157 HPKARE 162


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 2 HPKARDWFQ 10
HP R W++
Sbjct: 968 HPDTRLWYE 976


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 HPKARDWFQ 10
HP +WF+
Sbjct: 19 HPWVSEWFR 27


>sp|RL39_PYRFU|LARGE ribosomal subunit protein eL39|Pyrococcus furiosus (strain ATCC

Query: 1 THPKARDW 8
THPK R W
Sbjct: 37 THPKRRYW 44


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 4 KARDW 8
KARDW
Sbjct: 992 KARDW 996


>sp|RL39_THESM|LARGE ribosomal subunit protein eL39|Thermococcus sibiricus (strain DSM

Query: 1 THPKARDW 8
THPK R W
Sbjct: 37 THPKRRYW 44


>sp|FAEHP_METB6|BIFUNCTIONAL enzyme Fae/Hps|Methanoregula boonei (strain DSM 21154

Query: 2 HPKARDW 8
HP+A+D+
Sbjct: 116 HPEAKDY 122


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19 /

Query: 1 THPKARD 7
T+PK RD
Sbjct: 229 TYPKGRD 235


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 2 HPKARDWF 9
+PK RD+F
Sbjct: 703 NPKGRDFF 710


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KARDWFQ 10
+ RDWF+
Sbjct: 164 EVRDWFR 170


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 KARDWFQ 10
+ RDWF+
Sbjct: 164 EVRDWFR 170


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HPKARDWFQ 10
HPK +W +
Sbjct: 288 HPKLGEWIE 296


>sp|Y774_ARCFU|UNCHARACTERIZED protein AF_0774|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 THPKARDW 8
+H K+R+W
Sbjct: 33 SHIKSREW 40


>sp|RL39_METTH|LARGE ribosomal subunit protein eL39|Methanothermobacter

Query: 1 THPKARDW 8
+HPK R W
Sbjct: 37 SHPKMRHW 44


>sp|RL39_METMJ|LARGE ribosomal subunit protein eL39|Methanoculleus marisnigri (strain

Query: 1 THPKARDW 8
+HPK R+W
Sbjct: 36 SHPKRRNW 43


>sp|RL39_METBU|LARGE ribosomal subunit protein eL39|Methanococcoides burtonii (strain

Query: 1 THPKARDW 8
+HPK R W
Sbjct: 36 SHPKRRHW 43


>sp|TDXH2_SULME|PEROXIREDOXIN 2|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 3 PKARDWF 9
PKA+ W+
Sbjct: 193 PKAKSWY 199


>sp|RL39_META3|LARGE ribosomal subunit protein eL39|Methanococcus aeolicus (strain

Query: 1 THPKARDW 8
TH K R+W
Sbjct: 37 THTKMRNW 44


>sp|RL39_METVS|LARGE ribosomal subunit protein eL39|Methanococcus vannielii (strain

Query: 2 HPKARDW 8
HPK R W
Sbjct: 38 HPKMRHW 44


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 2 HPKARDWFQ 10
HP+ WF+
Sbjct: 928 HPETNVWFR 936


>sp|RL39_METMP|LARGE ribosomal subunit protein eL39|Methanococcus maripaludis (strain

Query: 2 HPKARDW 8
HPK R W
Sbjct: 38 HPKMRHW 44


>sp|RL39_METM7|LARGE ribosomal subunit protein eL39|Methanococcus maripaludis (strain

Query: 2 HPKARDW 8
HPK R W
Sbjct: 38 HPKMRHW 44


>sp|RL39_METM6|LARGE ribosomal subunit protein eL39|Methanococcus maripaludis (strain

Query: 2 HPKARDW 8
HPK R W
Sbjct: 38 HPKMRHW 44


>sp|RL39_METM5|LARGE ribosomal subunit protein eL39|Methanococcus maripaludis (strain

Query: 2 HPKARDW 8
HPK R W
Sbjct: 38 HPKMRHW 44


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 THPKARDWF 9
TH K + W+
Sbjct: 679 THDKKKPWY 687


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HPKARDWF 9
HP + DW
Sbjct: 160 HPLSEDWL 167


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 2 HPKARDW 8
H K +DW
Sbjct: 541 HRKGKDW 547




89|Sequence|441|450|RDWFQGHLRR

>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RDWFQGHLR 9
RDW + H R
Sbjct: 114 RDWLKSHFR 122


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RDWFQGHLR 9
RDW + H R
Sbjct: 114 RDWIKNHFR 122


>sp|METK_PYRNV|S-ADENOSYLMETHIONINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RDWFQGHLR 9
RDW + H R
Sbjct: 114 RDWIKQHFR 122


>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RDWFQGHLR 9
RDW + H R
Sbjct: 114 RDWIKQHFR 122


>sp|DADD_METBF|5'-DEOXYADENOSINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DWFQGHL 8
DW +GH+
Sbjct: 82 DWLEGHI 88


>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 DWFQGHLR 9
+W+ GH R
Sbjct: 109 EWYDGHTR 116


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 RDWFQGHLR 9
RDW+ HL+
Sbjct: 30 RDWWPNHLK 38


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 1 RDWFQGHLRR 10
RDW HL R
Sbjct: 57 RDWDTHHLTR 66


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain

Query: 1 RDWFQGHLRR 10
RDW HL R
Sbjct: 57 RDWDTHHLTR 66


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 2 DWFQGHL 8
DW GH+
Sbjct: 76 DWLSGHI 82


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 3 WFQGHLR 9
WF HLR
Sbjct: 12 WFADHLR 18


>sp|MDH_METTM|MALATE dehydrogenase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 RDWFQGHLR 9
RD+F G+ R
Sbjct: 201 RDYFSGYRR 209


>sp|LYSY_NATPD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 DWFQGHLR 9
+W+ GH R
Sbjct: 110 EWYDGHNR 117


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 2 DWFQGHL 8
DW Q H+
Sbjct: 79 DWLQDHI 85


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RDWFQGHLRR 10
++W + H++R
Sbjct: 396 KEWLESHIKR 405


>sp|Y045_METTH|MEMO1 family protein MTH_45|Methanothermobacter thermautotrophicus

Query: 3 WFQGH 7
W QGH
Sbjct: 159 WMQGH 163


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 1 RDWFQG 6
R+WF+G
Sbjct: 23 REWFRG 28


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 3 WFQGHLR 9
WF H R
Sbjct: 88 WFDSHFR 94


>sp|RIBL_METTP|FAD synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DWFQGHLRR 10
+W +G LR+
Sbjct: 102 NWLEGELRK 110


>sp|FER2_THEAC|PROBABLE ferredoxin TA0517|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DWFQGHL 8
+WF G+L
Sbjct: 64 EWFHGNL 70


>sp|YE7B_METJA|UNCHARACTERIZED protein MJ1479.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WFQGHLR 9
WF HLR
Sbjct: 122 WFYRHLR 128


>sp|HEM1_METHJ|GLUTAMYL-TRNA reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DWFQG 6
DWF+G
Sbjct: 41 DWFKG 45


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 2 DWFQGHLRR 10
DW + +L+R
Sbjct: 227 DWLKANLKR 235


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 WFQGH 7
WF GH
Sbjct: 231 WFYGH 235


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DWFQGHL 8
DW GH+
Sbjct: 207 DWVVGHI 213


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DWFQGHLRR 10
+W + H++R
Sbjct: 397 EWLESHIKR 405


>sp|SYP_CALMQ|PROLINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 DWFQGHLRR 10
+W + H+RR
Sbjct: 400 EWLRSHVRR 408


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 DWFQGH 7
+W+ GH
Sbjct: 110 EWYDGH 115


>sp|FOLD_PYRAE|BIFUNCTIONAL protein FolD|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RDWFQGHLRR 10
++W + H++R
Sbjct: 15 KEWARSHVKR 24


>sp|Y1530_METJA|UNCHARACTERIZED N-acetyltransferase MJ1530|Methanocaldococcus jannaschii (strain

Query: 2 DWFQGHL 8
DW GH+
Sbjct: 60 DWGNGHI 66




90|Sequence|446|455|GHLRRLRSRY

>sp|TATC_METAR|SEC-INDEPENDENT protein translocase protein TatC|Methanocella arvoryzae (strain

Query: 2 HLRRLRSR 9
HLR LR+R
Sbjct: 19 HLRELRNR 26


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 HLRRLRS 8
HLRRLRS
Sbjct: 435 HLRRLRS 441


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 HLRRLRS 8
HLRRLRS
Sbjct: 435 HLRRLRS 441


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 3 LRRLRSRY 10
LR+LRS Y
Sbjct: 108 LRKLRSNY 115


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GHLRRLRSRY 10
GH+ RS+Y
Sbjct: 120 GHMSNQRSKY 129


>sp|SPEH_PICTO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Picrophilus torridus (strain ATCC 700027

Query: 1 GHLRRLRSRY 10
GHL ++ S Y
Sbjct: 38 GHLTKISSEY 47


>sp|Y956_METJA|UNCHARACTERIZED protein MJ0956|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GHLRRLRSRY 10
G+L +LR +Y
Sbjct: 30 GYLLKLRGKY 39




91|Sequence|451|460|LRSRYSVASF

>sp|RRP41_METMA|EXOSOME complex component Rrp41|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LRSRYSVASF 10
+R RY++ASF
Sbjct: 75 IRYRYNMASF 84




92|Sequence|456|465|SVASFKFDAG

>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 VASFKFDAG 10
+A+F+FD G
Sbjct: 432 IATFQFDVG 440


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VASFKFDAG 10
+A+F+FD G
Sbjct: 433 IATFQFDIG 441




93|Sequence|461|470|KFDAGEVSYL

>sp|PCNA2_THEKO|DNA polymerase sliding clamp 2|Thermococcus kodakarensis (strain ATCC

Query: 3 DAGEVSYL 10
DAGEVS+L
Sbjct: 236 DAGEVSFL 243


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 2 FDAGEVSY 9
FD G++SY
Sbjct: 926 FDTGDISY 933


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KFDAGEVSY 9
+ DAG VSY
Sbjct: 63 RIDAGPVSY 71


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KFDAGEVSYL 10
KF+ GE YL
Sbjct: 394 KFENGEADYL 403


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KFDAGEVSYL 10
KF+ GEVS L
Sbjct: 380 KFERGEVSSL 389


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 2 FDAGEVSYL 10
F+ GEV YL
Sbjct: 393 FERGEVDYL 401


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FDAGEVSYL 10
DAGEV Y+
Sbjct: 213 LDAGEVEYV 221


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FDAGEVSYL 10
F+ GE+ YL
Sbjct: 394 FEKGEIDYL 402


>sp|TRMY_HALSA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halobacterium

Query: 1 KFDAGEVSYL 10
+ DAG V Y+
Sbjct: 63 RIDAGAVQYM 72


>sp|TRMY_HALS3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halobacterium

Query: 1 KFDAGEVSYL 10
+ DAG V Y+
Sbjct: 63 RIDAGAVQYM 72


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 1 KFDAGEV 7
KFD+GE+
Sbjct: 181 KFDSGEL 187


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 FDAGEVSY 9
+DA EVSY
Sbjct: 245 YDAVEVSY 252


>sp|RL23_META3|LARGE ribosomal subunit protein uL23|Methanococcus aeolicus (strain

Query: 2 FDAGEVS 8
+DAGEV+
Sbjct: 74 YDAGEVA 80


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 FDAGEVSY 9
FD+G SY
Sbjct: 519 FDSGSASY 526


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 KFDAGEVSYL 10
+FD+ +V+YL
Sbjct: 414 EFDSRDVNYL 423




94|Sequence|466|475|EVSYLPRDFS

>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVSYLPRDFS 10
E+SY P DFS
Sbjct: 542 ELSYYPSDFS 551


>sp|RNZ_PYRFU|RIBONUCLEASE Z|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SYLPRDF 9
+Y+PRDF
Sbjct: 285 AYVPRDF 291


>sp|HEM1_METS5|GLUTAMYL-TRNA reductase|Metallosphaera sedula (strain ATCC 51363

Query: 3 SYLPRDFS 10
SY P DFS
Sbjct: 228 SYFPLDFS 235


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 EVSYLPRDFS 10
E+ Y P DF+
Sbjct: 208 ELGYTPEDFT 217


>sp|Y3206_SACS2|RUTC family protein SSO3206|Saccharolobus solfataricus (strain ATCC

Query: 1 EVSYLPRD 8
EVS LPRD
Sbjct: 107 EVSRLPRD 114


>sp|T1S2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 2 VSYLPRDF 9
VS+LP D+
Sbjct: 268 VSFLPEDY 275


>sp|RIDA_PYRFU|2-IMINOBUTANOATE/2-IMINOPROPANOATE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EVSYLPRD 8
EVS LP+D
Sbjct: 107 EVSRLPKD 114


>sp|Y665_METMP|UPF0305 protein MMP0665|Methanococcus maripaludis (strain DSM 14266

Query: 1 EVSYLPRDF 9
+++YLP+D+
Sbjct: 32 DMTYLPQDY 40


>sp|Y854_PYRHO|RUTC family protein PH0854|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EVSYLPRD 8
EVS LP+D
Sbjct: 107 EVSRLPKD 114


>sp|PURA_THEAC|ADENYLOSUCCINATE synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VSYLPRDFS 10
+ Y+PRD +
Sbjct: 359 IDYVPRDMN 367


>sp|Y1251_PYRAB|RUTC family protein PYRAB12510|Pyrococcus abyssi (strain GE5 /

Query: 1 EVSYLPRD 8
EVS LP+D
Sbjct: 108 EVSRLPKD 115


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EVSYLPRDF 9
E+ Y P DF
Sbjct: 225 ELGYTPNDF 233


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 3 SYLPRDFS 10
++LP+DF+
Sbjct: 554 AFLPKDFN 561


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 3 SYLPRDFS 10
++LP+DF+
Sbjct: 554 AFLPKDFN 561


>sp|Y811_SULTO|RUTC family protein STK_08110|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EVSYLPRD 8
EVS LP+D
Sbjct: 106 EVSRLPKD 113


>sp|Y1691_METM7|UPF0305 protein MmarC7_1691|Methanococcus maripaludis (strain C7 /

Query: 1 EVSYLPRDF 9
+++YLP D+
Sbjct: 32 DMTYLPEDY 40


>sp|RPO3_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus furiosus (strain ATCC 43587

Query: 4 YLPRDF 9
Y+P+DF
Sbjct: 200 YIPKDF 205


>sp|RSMA_METMA|PROBABLE ribosomal RNA small subunit|Methanosarcina mazei (strain ATCC

Query: 2 VSYLPRDF 9
VS LP DF
Sbjct: 236 VSQLPEDF 243


>sp|Y221_METM6|UPF0305 protein MmarC6_0221|Methanococcus maripaludis (strain C6 /

Query: 1 EVSYLPRDF 9
+++YLP D+
Sbjct: 32 DLTYLPEDY 40




95|Sequence|471|480|PRDFSTYRPL

>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 2 RDFSTYRPL 10
RD STY PL
Sbjct: 296 RDASTYEPL 304


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 RDFSTYRP 9
+DFS+YRP
Sbjct: 238 KDFSSYRP 245


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 2 RDFSTYRPL 10
RDF +RP+
Sbjct: 27 RDFEEFRPI 35


>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DFSTYRPL 10
DF YRPL
Sbjct: 14 DFIEYRPL 21


>sp|AKSA_METMA|HOMOCITRATE synthase AksA|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DFSTYRPL 10
DF YRPL
Sbjct: 14 DFIDYRPL 21


>sp|AROK_THEKO|SHIKIMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RDFSTYRP 9
RDFS RP
Sbjct: 183 RDFSPIRP 190


>sp|RL44E_HALMA|LARGE ribosomal subunit protein eL42|Haloarcula marismortui (strain

Query: 1 PRDFSTYRP 9
PR F+TY P
Sbjct: 4 PRRFNTYCP 12


>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 2 RDFSTYRPL 10
+D STY PL
Sbjct: 297 KDPSTYEPL 305


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 PRDFSTYRPL 10
P DF Y PL
Sbjct: 86 PADFGHYGPL 95


>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 3 DFSTYRPL 10
DF+ Y PL
Sbjct: 48 DFTEYNPL 55


>sp|Y103_METJA|UNCHARACTERIZED protein MJ0103|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PRDFSTYR 8
P+DF T++
Sbjct: 356 PKDFGTHK 363


>sp|RL44E_NATPD|LARGE ribosomal subunit protein eL42|Natronomonas pharaonis (strain

Query: 1 PRDFSTYRP 9
PR F+TY P
Sbjct: 4 PRRFNTYCP 12


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 1 PRDFSTYRPL 10
P DF Y PL
Sbjct: 81 PADFGHYGPL 90


>sp|Y951_METJA|UNCHARACTERIZED protein MJ0951|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DFSTYRPL 10
DF+ Y PL
Sbjct: 55 DFTEYNPL 62


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 1 PRDFSTYRPL 10
P DF Y PL
Sbjct: 81 PADFGHYGPL 90


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 PRDFSTYRPL 10
P DF Y PL
Sbjct: 71 PADFGHYGPL 80


>sp|NFI_THEAC|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma acidophilum (strain

Query: 2 RDFSTYRPL 10
RDF T +PL
Sbjct: 113 RDFKTDQPL 121




96|Sequence|476|485|TYRPLPDPSV

>sp|CBID_METTH|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanothermobacter thermautotrophicus

Query: 3 RPLPDPSV 10
RP PDP V
Sbjct: 65 RPYPDPDV 72


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YRPLPDPSV 10
YR L DPS+
Sbjct: 196 YRDLEDPSI 204


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YRPLPDPSV 10
YR L DPS+
Sbjct: 136 YRDLEDPSI 144


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YRPLPDPSV 10
YR L DPS+
Sbjct: 199 YRDLEDPSI 207


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 YRPLPDPSV 10
YR L DPS+
Sbjct: 199 YRDLEDPSI 207


>sp|TATC_CENSY|SEC-INDEPENDENT protein translocase protein TatC|Cenarchaeum symbiosum (strain A)

Query: 2 YRPLPDP 8
Y P+PDP
Sbjct: 47 YYPVPDP 53


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RPLPDPSV 10
+P+P+PSV
Sbjct: 450 QPIPEPSV 457


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 2 YRPLPDPSV 10
YR +PDP +
Sbjct: 259 YRYIPDPDI 267


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YRPLPDP 8
YRPLP P
Sbjct: 604 YRPLPLP 610


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 YRPLPDPSV 10
YR L DPS+
Sbjct: 204 YRELEDPSI 212


>sp|PCNA3_AERPE|DNA polymerase sliding clamp 3|Aeropyrum pernix (strain ATCC 700893

Query: 1 TYRPLPDPSV 10
TY LP+P V
Sbjct: 120 TYEKLPEPKV 129


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 4 PLPDP 8
PLPDP
Sbjct: 49 PLPDP 53


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 2 YRPLPDPSV 10
YR +PDP +
Sbjct: 256 YRHIPDPDL 264


>sp|SRP54_SACI7|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 TYRPLPDPSV 10
TY+ L +PS+
Sbjct: 385 TYKELENPSI 394


>sp|SRP54_SACI6|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain M.16.4

Query: 1 TYRPLPDPSV 10
TY+ L +PS+
Sbjct: 385 TYKELENPSI 394


>sp|SRP54_SACI4|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 TYRPLPDPSV 10
TY+ L +PS+
Sbjct: 385 TYKELENPSI 394


>sp|SRP54_SACI3|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 TYRPLPDPSV 10
TY+ L +PS+
Sbjct: 385 TYKELENPSI 394


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 TYRPLPDPSV 10
TY+ L +PS+
Sbjct: 385 TYKELENPSI 394


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 TYRPLPDPSV 10
TY+ L +PS+
Sbjct: 385 TYKELENPSI 394


>sp|CBIX_ARCFU|SIROHYDROCHLORIN cobaltochelatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RPLPDPSV 10
RP+PD ++
Sbjct: 47 RPMPDEAI 54


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 TYRPLPDP 8
+++PLP P
Sbjct: 35 SWKPLPSP 42


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 2 YRPLPDPSV 10
YR +PDP +
Sbjct: 256 YRYIPDPDL 264


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 2 YRPLPDPSV 10
YR +PDP +
Sbjct: 256 YRYIPDPDL 264


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 2 YRPLPDPSV 10
YR +PDP +
Sbjct: 256 YRYIPDPDL 264


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 1 TYRPLPDPSV 10
TY+ L +PS+
Sbjct: 383 TYKELDNPSI 392


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 1 TYRPLPDPSV 10
TY+ L +PS+
Sbjct: 383 TYKELDNPSI 392


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 2 YRPLPDPSV 10
YR +PDP +
Sbjct: 256 YRYIPDPDL 264


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TYRPLPD 7
T +PLPD
Sbjct: 361 TQKPLPD 367


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 2 YRPLPDPSV 10
YR +PDP +
Sbjct: 256 YRYIPDPDL 264


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YRPLP 6
YRPLP
Sbjct: 99 YRPLP 103


>sp|KTHY_METKA|PROBABLE thymidylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 RPLPDPSV 10
RP+P P V
Sbjct: 107 RPVPKPDV 114


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 RPLPDPSV 10
RP P PS+
Sbjct: 528 RPRPKPSI 535


>sp|Y2133_ARCFU|UNCHARACTERIZED protein AF_2133|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YRPLPDPSV 10
Y PL DP +
Sbjct: 250 YNPLRDPII 258


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 YRPLPDPSV 10
YR +PDP +
Sbjct: 249 YRYIPDPDI 257


>sp|APE1_AERPE|HOMING endonuclease I-ApeI|Aeropyrum pernix (strain ATCC 700893

Query: 3 RPLPDPS 9
RPLP PS
Sbjct: 199 RPLPGPS 205


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YRPLPDPSV 10
Y+P+ PS+
Sbjct: 100 YKPITPPSI 108


>sp|SRP54_METS5|SIGNAL recognition particle 54 kDa|Metallosphaera sedula (strain ATCC

Query: 1 TYRPLPDPSV 10
TY+ L +PS+
Sbjct: 384 TYQELDNPSI 393


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 PLPDPSV 10
PLP PS+
Sbjct: 521 PLPAPSI 527


>sp|AGLJ_HALVD|GLYCOSYLTRANSFERASE AglJ|Haloferax volcanii (strain ATCC 29605

Query: 1 TYRPLPDPS 9
TY P PD S
Sbjct: 194 TYYPRPDGS 202


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19 /

Query: 1 TYRPLPDPSV 10
TY P+P V
Sbjct: 310 TYEPIPPEKV 319


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 TYRPLPDPSV 10
TY P +PS+
Sbjct: 409 TYNPYTEPSL 418


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 2 YRPLPDPSV 10
YR +PDP +
Sbjct: 245 YRFIPDPDL 253


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 2 YRPLPDPSV 10
YR +PDP +
Sbjct: 245 YRYIPDPDL 253


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TYRPLPDPSV 10
+YR LP+P
Sbjct: 132 SYRTLPEPEA 141


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YRPLPDPSV 10
Y+P+ PS+
Sbjct: 100 YKPITPPSI 108


>sp|Y1570_METJA|UNCHARACTERIZED protein MJ1570|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TYRPLPD 7
+Y PLPD
Sbjct: 64 SYAPLPD 70


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 1 TYRPLP 6
T+RPLP
Sbjct: 83 TFRPLP 88


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 2 YRPLPDPSV 10
YR +PDP +
Sbjct: 245 YRYIPDPDL 253


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RPLPDPSV 10
RPL DP V
Sbjct: 361 RPLKDPVV 368


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 2 YRPLPDPSV 10
YR PDP +
Sbjct: 265 YRYFPDPDL 273


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 2 YRPLPDPSV 10
YR PDP +
Sbjct: 266 YRYFPDPDL 274


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 YRPLP 6
YRPLP
Sbjct: 622 YRPLP 626


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain

Query: 1 TYRPLPDPSV 10
T P+PDP +
Sbjct: 84 TVSPVPDPDL 93


>sp|RL44E_METJA|LARGE ribosomal subunit protein eL42|Methanocaldococcus jannaschii

Query: 3 RPLPDPS 9
RPLPD S
Sbjct: 52 RPLPDRS 58


>sp|RS4E_KORCO|SMALL ribosomal subunit protein eS4|Korarchaeum cryptofilum (strain OPF8)

Query: 1 TYRPLPDP 8
YR +PDP
Sbjct: 99 NYRMVPDP 106


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 2 YRPLPDPSV 10
YR PDP +
Sbjct: 266 YRYFPDPDL 274




97|Sequence|481|490|PDPSVWSRRY

>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 DPSVWSRR 9
DPS+W R
Sbjct: 300 DPSIWKVR 307


>sp|DNPH1_METAC|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanosarcina

Query: 1 PDPSVWSRRY 10
PDPS+ R Y
Sbjct: 137 PDPSLEVRTY 146


>sp|HIS4_METMJ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanoculleus marisnigri

Query: 2 DPSVWSRRY 10
DP+ W+ R+
Sbjct: 30 DPAAWAHRW 38


>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 1 PDPSVWS 7
P P VWS
Sbjct: 175 PPPEVWS 181


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PSVWSRRY 10
P VWSRR+
Sbjct: 358 PPVWSRRH 365


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 DPSVWSRR 9
DPS+WS +
Sbjct: 121 DPSMWSSQ 128


>sp|KTHY_METHJ|PROBABLE thymidylate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PDPSVWSR 8
PDP W R
Sbjct: 105 PDPRTWLR 112


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 1 PDPSVWSRRY 10
PD +W R Y
Sbjct: 508 PDERLWVRGY 517


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 2 DPSVWSRR 9
DPS+WS +
Sbjct: 121 DPSMWSSQ 128


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 2 DPSVWSRR 9
DPS+WS +
Sbjct: 121 DPSMWSSQ 128


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 1 PDPSVWSRR 9
PD S+W R
Sbjct: 412 PDSSIWEFR 420


>sp|KTHY_METMJ|PROBABLE thymidylate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PDPSVWSRR 9
PDP W RR
Sbjct: 105 PDPLSWLRR 113


>sp|RL21_IGNH4|LARGE ribosomal subunit protein eL21|Ignicoccus hospitalis (strain

Query: 1 PDPSVWS 7
P+P++WS
Sbjct: 46 PNPAIWS 52


>sp|RNP4_METMP|RIBONUCLEASE P protein component 4|Methanococcus maripaludis (strain DSM 14266

Query: 1 PDPSVWSRR 9
P P W RR
Sbjct: 55 PYPKEWKRR 63


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 1 PDPSVWSRR 9
PD S+W R
Sbjct: 370 PDSSIWEFR 378


>sp|RNP4_METM5|RIBONUCLEASE P protein component 4|Methanococcus maripaludis (strain C5 /

Query: 1 PDPSVWSRR 9
P P W RR
Sbjct: 55 PYPKEWKRR 63


>sp|RNP4_METM6|RIBONUCLEASE P protein component 4|Methanococcus maripaludis (strain C6 /

Query: 1 PDPSVWSRR 9
P P W RR
Sbjct: 55 PYPKEWKRR 63


>sp|RNP4_METM7|RIBONUCLEASE P protein component 4|Methanococcus maripaludis (strain C7 /

Query: 1 PDPSVWSRR 9
P P W RR
Sbjct: 55 PYPKEWKRR 63


>sp|TKSU_THEKO|TK-SUBTILISIN kodakarensis (strain ATCC BAA-918

Query: 3 PSVWS 7
PSVWS
Sbjct: 120 PSVWS 124


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 1 PDPSVW 6
PDP VW
Sbjct: 57 PDPVVW 62


>sp|SFSA_PYRAE|SUGAR fermentation stimulation protein homolog|Pyrobaculum aerophilum

Query: 1 PDPSVWSRR 9
P +W+RR
Sbjct: 54 PGAKIWARR 62


>sp|KTHY_METLZ|PROBABLE thymidylate kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PDPSVW 6
PDP W
Sbjct: 105 PDPKAW 110


>sp|RS5_THEPD|SMALL ribosomal subunit protein uS5|Thermofilum pendens (strain DSM 2475

Query: 5 VWSRRY 10
VWSR Y
Sbjct: 168 VWSRSY 173


>sp|SURE_CALMQ|5'-NUCLEOTIDASE SurE|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PDPSVWSRRY 10
P PS WS Y
Sbjct: 178 PSPSRWSGGY 187




98|Sequence|486|495|WSRRYTEMAL

>sp|ALAXM_METBF|ALANYL-TRNA editing protein AlaX-M|Methanosarcina barkeri (strain Fusaro /

Query: 1 WSRRYTEMAL 10
W RRY M +
Sbjct: 95 WDRRYRHMRM 104


>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 1 WSRRYTEMAL 10
W RRY M +
Sbjct: 97 WDRRYRHMRM 106


>sp|ALAXM_SACS2|ALANYL-TRNA editing protein AlaX-M|Saccharolobus solfataricus (strain ATCC

Query: 1 WSRRYTEMAL 10
W RRY M L
Sbjct: 91 WDRRYRMMRL 100


>sp|ALAXM_METMA|ALANYL-TRNA editing protein AlaX-M|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WSRRYTEMAL 10
W RRY M +
Sbjct: 97 WDRRYRHMRM 106


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 WSRRYTEMAL 10
W R Y EM +
Sbjct: 1417 WGRHYIEMTI 1426


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 WSRRYTEMAL 10
W RRY+ M +
Sbjct: 584 WERRYSLMKM 593


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 WSRRYTEMAL 10
W R Y EM +
Sbjct: 1057 WGRHYIEMTI 1066


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RRYTEMAL 10
RRY +MAL
Sbjct: 535 RRYAKMAL 542


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WSRRYTE 7
WSR +TE
Sbjct: 112 WSRTFTE 118


>sp|RNP4_PYRAB|RIBONUCLEASE P protein component 4|Pyrococcus abyssi (strain GE5 /

Query: 2 SRRYTEMAL 10
+RRY E+AL
Sbjct: 37 ARRYVELAL 45


>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SRRYTEMA 9
SRR+TE A
Sbjct: 198 SRRFTEAA 205


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WSRRYTEMAL 10
W RRY M +
Sbjct: 584 WDRRYALMKM 593


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 1 WSRRYTEM 8
W R YTE+
Sbjct: 85 WRRIYTEL 92


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 WSRRYTEMAL 10
W RRY+ M +
Sbjct: 584 WERRYSLMKM 593


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 1 WSRRYTEMAL 10
W R Y EM +
Sbjct: 516 WGREYIEMVI 525


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 WSRRYTEMAL 10
W RRY M +
Sbjct: 584 WERRYALMKM 593


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 WSRRYTEMAL 10
W RRY M +
Sbjct: 589 WERRYALMKM 598


>sp|METXA_HALSA|HOMOSERINE O-acetyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WSRRYTE 7
W+RRY +
Sbjct: 146 WARRYPD 152


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 WSRRYTE 7
W++RY E
Sbjct: 135 WNKRYRE 141


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 1 WSRRYTEM 8
W R+Y E+
Sbjct: 517 WGRKYIEL 524


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WSRRYTEM 8
W R+Y E+
Sbjct: 517 WGRKYIEL 524


>sp|RNP4_PYRHO|RIBONUCLEASE P protein component 4|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SRRYTEMAL 10
++RY E+AL
Sbjct: 41 AKRYVELAL 49


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WSRRYT 6
W+RR+T
Sbjct: 158 WTRRFT 163


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WSRRYT 6
W+RR+T
Sbjct: 329 WARRFT 334




99|Sequence|491|500|TEMALPFFSL

>sp|RL22_NANEQ|LARGE ribosomal subunit protein uL22|Nanoarchaeum equitans (strain

Query: 2 EMALPFF 8
E+A+PFF
Sbjct: 51 ELAVPFF 57


>sp|ACDD_METMA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina mazei

Query: 2 EMALPFF 8
E ALPFF
Sbjct: 135 EKALPFF 141


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 EMALPFF 8
E ALPFF
Sbjct: 136 EKALPFF 142




100|Sequence|496|505|PFFSLAEVRV

>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFFSLAEV 8
PF LAEV
Sbjct: 332 PFIDLAEV 339




101|Sequence|501|510|AEVRVGYQSQ

>sp|ALBA_IGNH4|DNA/RNA-BINDING protein Alba|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AEVRVGYQS 9
AE+R+G Q+
Sbjct: 67 AEIRIGSQT 75




102|Sequence|506|515|GYQSQNISCF

>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 QNISCF 10
+NISCF
Sbjct: 88 KNISCF 93


>sp|Y1254_METJA|UNCHARACTERIZED protein MJ1254|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYQSQNISCF 10
GY + I+CF
Sbjct: 141 GYTNITINCF 150


>sp|SUI1_METB6|PROTEIN translation factor SUI1 homolog|Methanoregula boonei (strain DSM

Query: 1 GYQSQNIS 8
GY ++NIS
Sbjct: 94 GYSTENIS 101




103|Sequence|511|520|NISCFFRLVD

>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 1 NISCFFRLVD 10
N++CFF D
Sbjct: 98 NLACFFATAD 107


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NISCFFR 7
NISCF R
Sbjct: 89 NISCFAR 95


>sp|HIS2_PYRFU|HISTIDINE biosynthesis bifunctional protein HisIE|Pyrococcus furiosus (strain

Query: 1 NISCFFR 7
N SCF+R
Sbjct: 100 NYSCFYR 106


>sp|HIS3_ARCFU|PHOSPHORIBOSYL-AMP cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NISCFFRLVD 10
N SCF+R ++
Sbjct: 93 NYSCFYRRLE 102


>sp|HIS3_METMJ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 SCFFRLVD 10
SCF+R V+
Sbjct: 94 SCFYRTVE 101


>sp|GLYA_METAR|SERINE hydroxymethyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 NISCFFRLVD 10
NI+ FF L D
Sbjct: 96 NIAAFFALAD 105


>sp|PGP_ARCFU|PHOSPHOGLYCOLATE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NISCFFR 7
NISCF R
Sbjct: 43 NISCFAR 49


>sp|HIS3_METS3|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 SCFFR 7
SCFFR
Sbjct: 99 SCFFR 103


>sp|HIS3_METLZ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 SCFFRLVD 10
SCFFR ++
Sbjct: 99 SCFFRTME 106


>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 1 NISCFF 6
N++CFF
Sbjct: 98 NLACFF 103


>sp|Y2201_ARCFU|UNCHARACTERIZED protein AF_2201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SCFFRLVD 10
+C FR++D
Sbjct: 117 NCAFRMID 124


>sp|RL10E_PYRAB|LARGE ribosomal subunit protein uL16|Pyrococcus abyssi (strain GE5 /

Query: 2 ISCFFRLVD 10
+ C++R+ D
Sbjct: 158 VKCYYRIYD 166


>sp|SODM2_HALVD|SUPEROXIDE dismutase [Mn] 2|Haloferax volcanii (strain ATCC 29605

Query: 2 ISCFFRLVD 10
+S FF +VD
Sbjct: 175 VSAFFEVVD 183


>sp|SODM1_HALVD|SUPEROXIDE dismutase [Mn] 1|Haloferax volcanii (strain ATCC 29605

Query: 2 ISCFFRLVD 10
+S FF +VD
Sbjct: 176 VSAFFEVVD 184


>sp|MOAA_PYRHO|PROBABLE GTP 3',8-cyclase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NISCFF 6
N+SCF+
Sbjct: 22 NLSCFY 27




104|Sequence|516|525|FRLVDRDSVW

>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 2 RLVDRDSVW 10
R VDRDSV+
Sbjct: 174 RRVDRDSVF 182


>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 RLVDRDSVW 10
++ DRD VW
Sbjct: 100 KVFDRDLVW 108


>sp|Y1297_METTP|UPF0280 protein Mthe_1297|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FRLVDRDSV 9
F +VDRD V
Sbjct: 196 FSVVDRDEV 204


>sp|NTPPA_THEKO|DTTP/UTP pyrophosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FRLVDRDSVW 10
FR +D D +W
Sbjct: 123 FRELDEDLIW 132


>sp|AATE_METMP|A-TYPE ATP synthase subunit E|Methanococcus maripaludis (strain DSM 14266

Query: 1 FRLVDRDSVW 10
F L+D ++W
Sbjct: 131 FELIDDSTLW 140


>sp|NADM_HALLT|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 VDRDSVW 10
+DR+SVW
Sbjct: 75 LDRNSVW 81


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 2 RLVDRDSVW 10
R +D D VW
Sbjct: 527 RFLDADIVW 535


>sp|TFE_NATPD|TRANSCRIPTION factor E|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RLVDRDSVW 10
RL D DS W
Sbjct: 69 RLRDEDSGW 77


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 2 RLVDRDSVW 10
RL D DS W
Sbjct: 69 RLRDEDSGW 77


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VDRDSVW 10
+D+D +W
Sbjct: 137 IDKDEIW 143




105|Sequence|521|530|RDSVWGYDLG

>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 VWGYD 8
VWGYD
Sbjct: 167 VWGYD 171


>sp|MDH_PICTO|MALATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 5 WGYDL 9
WGYDL
Sbjct: 54 WGYDL 58


>sp|Y1488_PYRFU|UPF0128 protein PF1488|Pyrococcus furiosus (strain ATCC 43587

Query: 5 WGYDL 9
WGYDL
Sbjct: 28 WGYDL 32


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 VWGYDLG 10
+WGYD G
Sbjct: 25 LWGYDEG 31


>sp|Y1314_PYRHO|UPF0128 protein PH1314|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 WGYDL 9
WGYDL
Sbjct: 31 WGYDL 35


>sp|MDH_THEVO|MALATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 WGYDL 9
WGYDL
Sbjct: 54 WGYDL 58


>sp|Y2678_METMA|UNCHARACTERIZED serpin-like protein MM_2675|Methanosarcina mazei (strain ATCC

Query: 2 DSVWGYDLG 10
DSV GYD+
Sbjct: 42 DSVRGYDIA 50


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 VWGYDLG 10
+WGYD G
Sbjct: 25 MWGYDEG 31


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 VWGYDLG 10
+WGYD G
Sbjct: 25 MWGYDEG 31


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 VWGYDLG 10
+WGYD G
Sbjct: 25 MWGYDEG 31


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 VWGYDLG 10
+WGYD G
Sbjct: 25 MWGYDEG 31


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 VWGYDLG 10
+WGYD G
Sbjct: 25 MWGYDEG 31


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 VWGYDLG 10
+WGYD G
Sbjct: 25 MWGYDEG 31


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 1 RDSVWGYDLG 10
RD V Y+LG
Sbjct: 328 RDGVQAYELG 337


>sp|Y832_PYRAB|UPF0128 protein PYRAB08320|Pyrococcus abyssi (strain GE5 /

Query: 5 WGYDL 9
WGYDL
Sbjct: 28 WGYDL 32


>sp|Y2294_THEKO|UPF0128 protein TK2294|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 WGYDL 9
WGYDL
Sbjct: 28 WGYDL 32


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 RDSVWGYDLG 10
R + GYD+G
Sbjct: 141 RAKILGYDIG 150


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 1 RDSVWGYDLG 10
R + GYD+G
Sbjct: 141 RAKILGYDIG 150


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 RDSVWGYDLG 10
R + GYD+G
Sbjct: 141 RAKILGYDIG 150


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 RDSVWGYDLG 10
R + GYD+G
Sbjct: 141 RAKILGYDIG 150


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC

Query: 1 RDSVWGYDL 9
R+ VW +DL
Sbjct: 40 REGVWYWDL 48


>sp|FLAB5_PYRAB|FLAGELLIN B5|Pyrococcus abyssi (strain GE5 /

Query: 3 SVWGY 7
S+WGY
Sbjct: 58 SIWGY 62


>sp|Y1463_METJA|UPF0128 protein MJ1463|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WGYDL 9
WG+DL
Sbjct: 36 WGFDL 40


>sp|G3P_METMP|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DSVWGYD 8
+S+W YD
Sbjct: 122 NSLWSYD 128


>sp|G3P_METM7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 DSVWGYD 8
+S+W YD
Sbjct: 122 NSLWSYD 128


>sp|G3P_METM5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 DSVWGYD 8
+S+W YD
Sbjct: 122 NSLWSYD 128


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DSVWGYD 8
+S+W YD
Sbjct: 122 NSLWSYD 128


>sp|APT_METM7|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 RDSVWGYDL 9
RD + GYD+
Sbjct: 156 RDKLKGYDI 164


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 4 VWGYDLG 10
+W Y+LG
Sbjct: 372 IWKYELG 378


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 5 WGYDLG 10
WG DLG
Sbjct: 306 WGGDLG 311


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DSVWGYDL 9
+ VWGY++
Sbjct: 382 EKVWGYEI 389


>sp|SYDND_METMA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 WGYDLG 10
WG DLG
Sbjct: 307 WGDDLG 312


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 WGYDLG 10
WG DLG
Sbjct: 307 WGDDLG 312


>sp|SYDND_METAC|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 WGYDLG 10
WG DLG
Sbjct: 307 WGDDLG 312


>sp|APT_METMP|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 RDSVWGYDL 9
RD + GYD+
Sbjct: 156 RDKLKGYDI 164


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 VWGYD 8
+WGYD
Sbjct: 25 MWGYD 29


>sp|RRP4_METTH|EXOSOME complex component Rrp4|Methanothermobacter thermautotrophicus

Query: 1 RDSVWGYDL 9
R S+WG D+
Sbjct: 74 RFSMWGLDI 82


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 2 DSVWGYDL 9
DS+W Y L
Sbjct: 935 DSMWEYPL 942


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 2 DSVWGYDL 9
DS+W Y L
Sbjct: 935 DSMWEYPL 942


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 3 SVWGYD 8
+VWG+D
Sbjct: 80 TVWGFD 85


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 2 DSVWGYDL 9
DS+W Y L
Sbjct: 935 DSMWEYPL 942


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 2 DSVWGYDL 9
DS+W Y L
Sbjct: 935 DSMWEYPL 942


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 5 WGYDLG 10
WG DLG
Sbjct: 101 WGEDLG 106


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 WGYD 8
WGYD
Sbjct: 566 WGYD 569


>sp|MTRH_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanothermobacter

Query: 3 SVWGYDLG 10
S WGY +G
Sbjct: 217 SKWGYPVG 224


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RDSVWG 6
RD++WG
Sbjct: 232 RDNMWG 237


>sp|MTRH_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanothermobacter marburgensis

Query: 3 SVWGYDLG 10
S WGY +G
Sbjct: 217 SKWGYPVG 224


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DSVWGYDL 9
D ++GYD+
Sbjct: 558 DPIYGYDI 565


>sp|DAPF_ARCFU|DIAMINOPIMELATE epimerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RDSVWGYDL 9
+ VWGY++
Sbjct: 135 KTDVWGYEV 143




106|Sequence|526|535|GYDLGLRSLI

>sp|LEU1_SULAC|2-ISOPROPYLMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GYDLGLRSLI 10
GYD+G+R+ +
Sbjct: 254 GYDVGVRTYL 263


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LGLRSLI 10
LGLRSL+
Sbjct: 1116 LGLRSLV 1122


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YDLGLRSL 9
YD GLRS+
Sbjct: 629 YDAGLRSI 636


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 YDLGLRSL 9
YDLG+R +
Sbjct: 147 YDLGVRGI 154


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYDLGL 6
GYDLG+
Sbjct: 247 GYDLGV 252


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YDLGLRSL 9
YDLG+R +
Sbjct: 147 YDLGVRGV 154


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GYDLGL 6
GYDLG+
Sbjct: 34 GYDLGV 39




107|Sequence|531|540|LRSLIPAVLT

>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 RSLIPAVL 9
RSLIPA +
Sbjct: 207 RSLIPAAI 214


>sp|TRPE1_HALSA|ANTHRANILATE synthase component 1 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 LRSLIPAV 8
LRS++PAV
Sbjct: 125 LRSVMPAV 132




108|Sequence|536|545|PAVLTVSMLG

>sp|Y1063_METPE|UPF0173 metal-dependent hydrolase Mpal_1063|Methanosphaerula palustris

Query: 1 PAVLTVSML 9
PAV +VSML
Sbjct: 94 PAVHSVSML 102




109|Sequence|541|550|VSMLGYPFIL

>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 1 VSMLGYPFIL 10
+S+ GYP+IL
Sbjct: 341 ISINGYPYIL 350


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VSMLGYPFI 9
VS +GYP+I
Sbjct: 59 VSAIGYPYI 67


>sp|SPSS_METMP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 5 GYPFIL 10
GYPF+L
Sbjct: 186 GYPFLL 191


>sp|SPSS_METM7|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C7 /

Query: 5 GYPFIL 10
GYPF+L
Sbjct: 186 GYPFLL 191


>sp|SPSS_METM6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C6 /

Query: 5 GYPFIL 10
GYPF+L
Sbjct: 186 GYPFLL 191


>sp|SPSS_METM5|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C5 /

Query: 5 GYPFIL 10
GYPF+L
Sbjct: 186 GYPFLL 191


>sp|SPSS_META3|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 GYPFIL 10
GYPF+L
Sbjct: 189 GYPFLL 194


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 VSMLGYPFIL 10
V M+GYP ++
Sbjct: 700 VEMVGYPVLV 709


>sp|PYRF_SULTO|OROTIDINE 5'-phosphate decarboxylase|Sulfurisphaera tokodaii (strain DSM

Query: 4 LGYPFIL 10
+GYP IL
Sbjct: 26 IGYPLIL 32


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 4 LGYPFI 9
+GYPF+
Sbjct: 37 VGYPFV 42


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain

Query: 4 LGYPFI 9
+GYPF+
Sbjct: 37 VGYPFV 42


>sp|AATC_METBU|A-TYPE ATP synthase subunit C|Methanococcoides burtonii (strain DSM 6242

Query: 4 LGYPFIL 10
L YPF+L
Sbjct: 144 LSYPFLL 150


>sp|CDPAS_METVS|CDP-ARCHAEOL synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VSMLGYPFIL 10
VS LG+ FIL
Sbjct: 72 VSNLGFKFIL 81


>sp|Y78B_METJA|UNCHARACTERIZED protein MJ0785.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LGYPFIL 10
L YPFIL
Sbjct: 16 LAYPFIL 22




110|Sequence|546|555|YPFILPDMVG

>sp|AKSA_METMA|HOMOCITRATE synthase AksA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YPFILPDMVG 10
Y LP+MVG
Sbjct: 318 YELFLPEMVG 327


>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YPFILPDMVG 10
Y LP+MVG
Sbjct: 318 YELFLPEMVG 327


>sp|ILVC_SULAC|KETOL-ACID reductoisomerase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 3 FILPDMV 9
F+LPDM+
Sbjct: 79 FLLPDMI 85


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 YPFILPDM 8
YPF+ P+M
Sbjct: 896 YPFLGPEM 903


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 YPFILPDM 8
YPF+ P+M
Sbjct: 896 YPFLGPEM 903


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 YPFILPDM 8
YPF+ P+M
Sbjct: 896 YPFLGPEM 903


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 YPFILPDM 8
YPF+ P+M
Sbjct: 896 YPFLGPEM 903


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 YPFILPDM 8
YPF+ P+M
Sbjct: 896 YPFLGPEM 903


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 YPFILPDM 8
YPF+ P+M
Sbjct: 896 YPFLGPEM 903


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 YPFILPDM 8
YPF+ P+M
Sbjct: 896 YPFLGPEM 903


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 YPFILPDM 8
YPF+ P+M
Sbjct: 896 YPFLGPEM 903


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 YPFILPDM 8
YPF+ P+M
Sbjct: 896 YPFLGPEM 903


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 YPFILPDM 8
YPF+ P+M
Sbjct: 885 YPFLGPEM 892


>sp|GATD_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfolobus acidocaldarius (strain ATCC

Query: 1 YPFILPDMV 9
YP + PDMV
Sbjct: 312 YPGLSPDMV 320


>sp|RS19_THESM|SMALL ribosomal subunit protein uS19|Thermococcus sibiricus (strain DSM

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 73 ILPEMVG 79


>sp|RS19_THEPD|SMALL ribosomal subunit protein uS19|Thermofilum pendens (strain DSM

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 81 ILPEMVG 87


>sp|RS19_THEON|SMALL ribosomal subunit protein uS19|Thermococcus onnurineus (strain

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 73 ILPEMVG 79


>sp|RS19_PYRAE|SMALL ribosomal subunit protein uS19|Pyrobaculum aerophilum (strain ATCC

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 98 ILPEMVG 104


>sp|RS19_METLZ|SMALL ribosomal subunit protein uS19|Methanocorpusculum labreanum

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 76 ILPEMVG 82


>sp|RS19_METAR|SMALL ribosomal subunit protein uS19|Methanocella arvoryzae (strain DSM

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 80 ILPEMVG 86


>sp|RS19_KORCO|SMALL ribosomal subunit protein uS19|Korarchaeum cryptofilum (strain

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 72 ILPEMVG 78


>sp|BIOY_PYRHO|PROBABLE biotin transporter BioY|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PFILPDMV 9
PFI+PD+V
Sbjct: 139 PFIVPDIV 146


>sp|RS19_PYRNV|SMALL ribosomal subunit protein uS19|Pyrobaculum neutrophilum (strain DSM

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 98 ILPEMVG 104


>sp|RS19_PYRAR|SMALL ribosomal subunit protein uS19|Pyrobaculum arsenaticum (strain DSM

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 99 ILPEMVG 105


>sp|GCK_PICTO|GLYCERATE 2-kinase|Picrophilus torridus (strain ATCC 700027

Query: 2 PFILPDMV 9
PFIL D+V
Sbjct: 68 PFILKDLV 75


>sp|RS19_PYRIL|SMALL ribosomal subunit protein uS19|Pyrobaculum islandicum (strain DSM

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 100 ILPEMVG 106


>sp|RS19_PYRCJ|SMALL ribosomal subunit protein uS19|Pyrobaculum calidifontis (strain DSM

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 98 ILPEMVG 104


>sp|RS19_PYRHO|SMALL ribosomal subunit protein uS19|Pyrococcus horikoshii (strain ATCC

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 72 ILPEMVG 78


>sp|RS19_SULAC|SMALL ribosomal subunit protein uS19|Sulfolobus acidocaldarius (strain

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 79 ILPEMVG 85


>sp|RS19_PYRFU|SMALL ribosomal subunit protein uS19|Pyrococcus furiosus (strain ATCC

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 72 ILPEMVG 78


>sp|RS19_METMA|SMALL ribosomal subunit protein uS19|Methanosarcina mazei (strain ATCC

Query: 4 ILPDMVG 10
ILP+M+G
Sbjct: 76 ILPEMIG 82


>sp|RS19_METHJ|SMALL ribosomal subunit protein uS19|Methanospirillum hungatei JF-1

Query: 4 ILPDMVG 10
ILP+M+G
Sbjct: 77 ILPEMIG 83


>sp|RS19_METBF|SMALL ribosomal subunit protein uS19|Methanosarcina barkeri (strain

Query: 4 ILPDMVG 10
ILP+M+G
Sbjct: 76 ILPEMIG 82


>sp|RS19_METAC|SMALL ribosomal subunit protein uS19|Methanosarcina acetivorans (strain

Query: 4 ILPDMVG 10
ILP+M+G
Sbjct: 76 ILPEMIG 82


>sp|RS19_SULTO|SMALL ribosomal subunit protein uS19|Sulfurisphaera tokodaii (strain

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 79 ILPEMVG 85


>sp|RL10_PICTO|LARGE ribosomal subunit protein uL10|Picrophilus torridus (strain ATCC

Query: 2 PFILPDMV 9
P I+PDM+
Sbjct: 231 PEIVPDMI 238


>sp|RS19_HYPBU|SMALL ribosomal subunit protein uS19|Hyperthermus butylicus (strain DSM

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 84 ILPEMVG 90


>sp|RS19_THEKO|SMALL ribosomal subunit protein uS19|Thermococcus kodakarensis (strain

Query: 4 ILPDMVG 10
+LP+MVG
Sbjct: 73 VLPEMVG 79


>sp|RS19_METTP|SMALL ribosomal subunit protein uS19|Methanothrix thermoacetophila

Query: 4 ILPDMVG 10
+LP+MVG
Sbjct: 76 VLPEMVG 82


>sp|RS19_ARCFU|SMALL ribosomal subunit protein uS19|Archaeoglobus fulgidus (strain

Query: 4 ILPDMVG 10
+LP+MVG
Sbjct: 73 VLPEMVG 79


>sp|RS19_METKA|SMALL ribosomal subunit protein uS19|Methanopyrus kandleri (strain AV19

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 91 ILPEMVG 97


>sp|RS19_AERPE|SMALL ribosomal subunit protein uS19|Aeropyrum pernix (strain ATCC

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 84 ILPEMVG 90


>sp|RS19_THEGJ|SMALL ribosomal subunit protein uS19|Thermococcus gammatolerans (strain

Query: 4 ILPDMVG 10
+LP+MVG
Sbjct: 73 VLPEMVG 79


>sp|RS19_METMJ|SMALL ribosomal subunit protein uS19|Methanoculleus marisnigri (strain

Query: 4 ILPDMVG 10
I+P+MVG
Sbjct: 77 IMPEMVG 83


>sp|RS19_METS5|SMALL ribosomal subunit protein uS19|Metallosphaera sedula (strain ATCC

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 79 ILPEMVG 85


>sp|RS19_PYRAB|SMALL ribosomal subunit protein uS19|Pyrococcus abyssi (strain GE5 /

Query: 4 ILPDMVG 10
+LP+MVG
Sbjct: 72 VLPEMVG 78


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 4 ILPDMVG 10
++PDM+G
Sbjct: 1042 LMPDMIG 1048


>sp|RS19_METJA|SMALL ribosomal subunit protein uS19|Methanocaldococcus jannaschii

Query: 4 ILPDMVG 10
I PDMVG
Sbjct: 92 ITPDMVG 98


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 1 YPFILPDMV 9
YP I PD++
Sbjct: 310 YPGISPDII 318


>sp|PSB1_HYPBU|PROTEASOME subunit beta 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 YPFILPDMVG 10
YPF+ +VG
Sbjct: 101 YPFLSETLVG 110


>sp|RS19_STAMF|SMALL ribosomal subunit protein uS19|Staphylothermus marinus (strain

Query: 4 ILPDMVG 10
ILP+M+G
Sbjct: 83 ILPEMIG 89


>sp|RS19_CALMQ|SMALL ribosomal subunit protein uS19|Caldivirga maquilingensis (strain

Query: 4 ILPDMVG 10
ILP+MVG
Sbjct: 127 ILPEMVG 133


>sp|RS19_METST|SMALL ribosomal subunit protein uS19|Methanosphaera stadtmanae (strain

Query: 4 ILPDMVG 10
+LP+MVG
Sbjct: 76 VLPNMVG 82


>sp|RS19_METS3|SMALL ribosomal subunit protein uS19|Methanobrevibacter smithii (strain

Query: 4 ILPDMVG 10
+LP+MVG
Sbjct: 76 VLPEMVG 82


>sp|RS19_METTH|SMALL ribosomal subunit protein uS19|Methanothermobacter

Query: 4 ILPDMVG 10
+LP+MVG
Sbjct: 76 VLPEMVG 82




111|Sequence|551|560|PDMVGGNAVP

>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 1 PDMVGGNA 8
PD+VGG A
Sbjct: 86 PDLVGGAA 93


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 1 PDMVGGNA 8
PD+VGG A
Sbjct: 86 PDIVGGAA 93


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 1 PDMVGGNA 8
PD+VGG A
Sbjct: 86 PDVVGGAA 93


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 1 PDMVGGNA 8
PD+VGG A
Sbjct: 86 PDVVGGAA 93


>sp|HJC_ARCFU|CROSSOVER junction endodeoxyribonuclease Hjc|Archaeoglobus fulgidus (strain

Query: 1 PDMVGGNA 8
PD+V GN
Sbjct: 37 PDIVAGNG 44


>sp|AKSA_METMA|HOMOCITRATE synthase AksA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PDMVGG 6
P+MVGG
Sbjct: 323 PEMVGG 328


>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PDMVGG 6
P+MVGG
Sbjct: 323 PEMVGG 328


>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 2 DMVGGN 7
D+VGGN
Sbjct: 119 DLVGGN 124


>sp|TRPD_METS3|ANTHRANILATE phosphoribosyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 DMVGGN 7
D+VGGN
Sbjct: 261 DLVGGN 266


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DMVGGNAVP 10
++VGG+A P
Sbjct: 65 ELVGGHAYP 73


>sp|FOLD_METPE|BIFUNCTIONAL protein FolD|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 DMVGGNAV 9
DMV G+AV
Sbjct: 212 DMVSGDAV 219




112|Sequence|556|565|GNAVPQRTAG

>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 NAVPQRTAG 10
NAV +RTAG
Sbjct: 205 NAVSERTAG 213


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 NAVPQRTAG 10
NAV +RTAG
Sbjct: 205 NAVSERTAG 213


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 2 NAVPQRTAG 10
NAV +RTAG
Sbjct: 205 NAVSERTAG 213


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 NAVPQRTAG 10
NAV +RTAG
Sbjct: 205 NAVSERTAG 213


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 NAVPQRTAG 10
NAV +RTAG
Sbjct: 205 NAVSERTAG 213


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 NAVPQRTAG 10
NAV +RTAG
Sbjct: 205 NAVGERTAG 213


>sp|Y378_METTH|UPF0104 membrane protein MTH_378|Methanothermobacter thermautotrophicus

Query: 1 GNAVPQRTAG 10
GN P R+AG
Sbjct: 83 GNLSPMRSAG 92




113|Sequence|561|570|QRTAGGDVPE

>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 TAGGDVP 9
TAGGD+P
Sbjct: 73 TAGGDIP 79


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QRTAGGDVPE 10
+RT G DVPE
Sbjct: 461 RRTIGLDVPE 470


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 3 TAGGDV 8
TAGGDV
Sbjct: 88 TAGGDV 93


>sp|DYR2_HALMA|DIHYDROFOLATE reductase 2|Haloarcula marismortui (strain ATCC 43049

Query: 4 AGGDVP 9
AGGD+P
Sbjct: 19 AGGDIP 24


>sp|RS19E_AERPE|SMALL ribosomal subunit protein eS19|Aeropyrum pernix (strain ATCC 700893

Query: 2 RTAGGDVP 9
R AGG VP
Sbjct: 93 RKAGGSVP 100


>sp|SYH_METMA|HISTIDINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QRTAGGDVP 9
Q GGDVP
Sbjct: 291 QLFGGGDVP 299


>sp|SYH_METAC|HISTIDINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QRTAGGDVP 9
Q GGDVP
Sbjct: 291 QLFGGGDVP 299




114|Sequence|566|575|GDVPERELYI

>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 DVPERELYI 10
D+PERE +I
Sbjct: 11 DIPEREQHI 19


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 DVPERELYI 10
D+PERE +I
Sbjct: 11 DIPEREQHI 19


>sp|Y123_PYRFU|UPF0146 protein PF0123|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GDVPEREL 8
GDVP RE+
Sbjct: 110 GDVPPREM 117


>sp|SYH_METMJ|HISTIDINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GDVPER 6
GDVPER
Sbjct: 223 GDVPER 228


>sp|RRP41_THEAC|EXOSOME complex component Rrp41|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GDVPERELY 9
GDV E ELY
Sbjct: 206 GDVTEDELY 214


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DVPEREL 8
DVP+REL
Sbjct: 259 DVPDREL 265


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 1 GDVPERELYI 10
G VPERE I
Sbjct: 120 GSVPEREPLI 129


>sp|DTDA_METM7|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C7 /

Query: 2 DVPERELYI 10
D P+ E+YI
Sbjct: 42 DFPDSEMYI 50


>sp|SYFA_METHJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 VPERELY 9
+PER+LY
Sbjct: 73 LPERQLY 79


>sp|METK_AERPE|S-ADENOSYLMETHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GDVPEREL 8
GD+PE+++
Sbjct: 262 GDIPEKKI 269


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GDVPERELYI 10
G+V +RE Y+
Sbjct: 96 GNVAQREKYV 105


>sp|Y830_PYRAE|PROTEIN PAE0830|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GDVPERELY 9
G+V EREL+
Sbjct: 176 GEVIERELW 184


>sp|BRIX_METBU|PROBABLE Brix domain-containing ribosomal biogenesis|Methanococcoides

Query: 2 DVPERELY 9
D+PE E Y
Sbjct: 111 DIPEGECY 118


>sp|RRP41_THEVO|EXOSOME complex component Rrp41|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GDVPERELY 9
GDV E E Y
Sbjct: 206 GDVTEDEFY 214


>sp|Y1674_SULAC|UNCHARACTERIZED protein Saci_1674|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GDVPERELYI 10
GD+ +RE+ I
Sbjct: 171 GDISQREVLI 180


>sp|RFRNP_PYRFU|RNA-FREE ribonuclease P|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PERELYI 10
PE ELYI
Sbjct: 63 PEMELYI 69


>sp|NCSA_HALVD|TRNA 2-thiolation protein NcsA|Haloferax volcanii (strain ATCC 29605

Query: 2 DVPERELYI 10
DVPE+E+ +
Sbjct: 220 DVPEKEVAL 228




115|Sequence|571|580|RELYIRWLEV

>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 ELYIRWLE 9
E+++RWL+
Sbjct: 248 EMFVRWLK 255


>sp|METK_METTP|S-ADENOSYLMETHIONINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RELYIRWLE 9
RE+ RWLE
Sbjct: 374 REITDRWLE 382


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 1 RELYIRWL 8
+EL I+WL
Sbjct: 318 KELVIKWL 325


>sp|DFX_ARCFU|DESULFOFERRODOXIN homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YIRWLEV 10
YI W+EV
Sbjct: 76 YIEWIEV 82


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ELYIRWLEV 10
+L RWLE+
Sbjct: 345 DLIFRWLEI 353


>sp|Y886_HYPBU|UPF0173 metal-dependent hydrolase Hbut_0886|Hyperthermus butylicus

Query: 4 YIRWL 8
Y+RWL
Sbjct: 3 YVRWL 7


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 RELYIRWL 8
RE+ +RWL
Sbjct: 481 REMRVRWL 488


>sp|THYX_PYRFU|FLAVIN-DEPENDENT thymidylate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RELYIRWLEV 10
RELY +W +V
Sbjct: 115 RELYEKWKKV 124


>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ELYIRWLEV 10
E Y+ WLEV
Sbjct: 260 ERYLGWLEV 268


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RELYIRWLE 9
RE Y RW++
Sbjct: 466 REYYARWVK 474




116|Sequence|576|585|RWLEVAAFMP

>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LEVAAFMP 10
LE+AAF+P
Sbjct: 92 LEIAAFLP 99


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 WLEVAAF 8
WLEVA F
Sbjct: 292 WLEVATF 298


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 WLEVAAF 8
WLEVA F
Sbjct: 292 WLEVATF 298


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 2 WLEVAAF 8
WLEVA F
Sbjct: 292 WLEVATF 298


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 2 WLEVAAF 8
WLEVA F
Sbjct: 292 WLEVATF 298


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 2 WLEVAAF 8
WLEVA F
Sbjct: 292 WLEVATF 298


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 WLEVAAF 8
WLEVA F
Sbjct: 294 WLEVATF 300


>sp|RL15_META3|LARGE ribosomal subunit protein uL15|Methanococcus aeolicus (strain

Query: 1 RWLEVAAFMP 10
RW+ +MP
Sbjct: 43 RWIHTVKYMP 52


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 RWLEVAAFMP 10
RWLE F P
Sbjct: 16 RWLEAKVFEP 25


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WLEVAAF 8
W+EVA F
Sbjct: 294 WIEVATF 300


>sp|RL15_METKA|LARGE ribosomal subunit protein uL15|Methanopyrus kandleri (strain AV19

Query: 1 RWLEVAAFMP 10
+W V +MP
Sbjct: 45 KWFHVIKYMP 54


>sp|RL15_METVS|LARGE ribosomal subunit protein uL15|Methanococcus vannielii (strain

Query: 1 RWLEVAAFMP 10
+WL V F P
Sbjct: 43 KWLSVCKFNP 52


>sp|RL15_METVA|LARGE ribosomal subunit protein uL15|Methanococcus vannielii

Query: 1 RWLEVAAFMP 10
+WL V F P
Sbjct: 43 KWLSVCKFNP 52


>sp|RL15_METMP|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 RWLEVAAFMP 10
+WL V F P
Sbjct: 43 KWLSVCKFNP 52


>sp|RL15_METM7|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 RWLEVAAFMP 10
+WL V F P
Sbjct: 43 KWLSVCKFNP 52


>sp|RL15_METM6|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 RWLEVAAFMP 10
+WL V F P
Sbjct: 43 KWLSVCKFNP 52


>sp|RL15_METM5|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 RWLEVAAFMP 10
+WL V F P
Sbjct: 43 KWLSVCKFNP 52


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LEVAAFMP 10
LE+A F+P
Sbjct: 173 LEIAKFLP 180


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RWLEVAAFMP 10
RWLE F P
Sbjct: 16 RWLEAKIFEP 25


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RWLEVAAFMP 10
RWLE F P
Sbjct: 16 RWLEAKIFEP 25


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 WLEVAAF 8
W+EVA F
Sbjct: 292 WVEVATF 298


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 WLEVAAF 8
W+E+A F
Sbjct: 302 WIEIATF 308


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RWLEVAAFMP 10
RW+E F P
Sbjct: 16 RWMEARVFEP 25


>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WLEVAAF 8
W+E+A F
Sbjct: 300 WIEIATF 306


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 WLEVAAF 8
W+E+A F
Sbjct: 302 WIEIATF 308


>sp|TRPB1_AERPE|TRYPTOPHAN synthase beta chain 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 RWLEVAAFMP 10
RW +AA +P
Sbjct: 7 RWYNIAADLP 16


>sp|TRPB_PYRAR|TRYPTOPHAN synthase beta chain|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RWLEVAAFMP 10
RW +AA +P
Sbjct: 4 RWYNIAADLP 13


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WLEVAAF 8
W+EVA F
Sbjct: 302 WIEVATF 308


>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RWLEVAAFMP 10
RW +AA +P
Sbjct: 4 RWYNIAADLP 13


>sp|TRPB_PYRAE|TRYPTOPHAN synthase beta chain|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RWLEVAAFMP 10
RW +AA +P
Sbjct: 4 RWYNIAADLP 13


>sp|Y794_METJA|UNCHARACTERIZED protein MJ0794|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WLEVAAFM 9
WL +A FM
Sbjct: 83 WLIIAGFM 90




117|Sequence|581|590|AAFMPAMQFS

>sp|CBID_METHJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 FMPAMQFS 10
F+PAMQ S
Sbjct: 301 FLPAMQTS 308




118|Sequence|586|595|AMQFSIPPWR

>sp|GLNA3_HALMT|GLUTAMINE synthetase 3|Haloferax mediterranei (strain ATCC 33500

Query: 4 FSIPPWR 10
F+I PWR
Sbjct: 87 FAILPWR 93


>sp|G3P_METFE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermus fervidus

Query: 4 FSIPPWR 10
F IP WR
Sbjct: 276 FEIPVWR 282


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 5 SIPPW 9
S+PPW
Sbjct: 169 SMPPW 173


>sp|Y585_METJA|UNCHARACTERIZED protein MJ0585|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MQFSIPPW 9
+QF IP W
Sbjct: 144 LQFKIPNW 151


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 3 QFSIPPWR 10
QF + PWR
Sbjct: 210 QFYLLPWR 217


>sp|COXX_THEAC|PROTOHEME IX farnesyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 QFSIPPW 9
+FSI PW
Sbjct: 161 KFSILPW 167


>sp|RS15_CALMQ|SMALL ribosomal subunit protein uS15|Caldivirga maquilingensis (strain

Query: 5 SIPPW 9
+IPPW
Sbjct: 21 TIPPW 25




119|Sequence|591|600|IPPWRYDAEV

>sp|MDH_THEAC|MALATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PPWRYDAEV 10
P WRYD +V
Sbjct: 52 PHWRYDLDV 60


>sp|ASSY_THEAC|ARGININOSUCCINATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IPPWRYDAE 9
+PPW+ +AE
Sbjct: 200 VPPWKANAE 208


>sp|COFC_METPS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella paludicola (strain DSM 17711

Query: 3 PWRYDAEV 10
P++YDAE+
Sbjct: 54 PFKYDAEI 61


>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 IPPWRYDAEV 10
+PPW Y AE+
Sbjct: 57 LPPWAYFAEL 66


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IPPWRYDAEV 10
+PPW Y A+V
Sbjct: 57 LPPWAYFAQV 66


>sp|RL22_METS5|LARGE ribosomal subunit protein uL22|Metallosphaera sedula (strain ATCC

Query: 1 IPPWRYD 7
+P WRYD
Sbjct: 60 LPYWRYD 66


>sp|RL22_THEPD|LARGE ribosomal subunit protein uL22|Thermofilum pendens (strain DSM

Query: 1 IPPWRYDAEV 10
+P WRY E+
Sbjct: 1 MPTWRYSVEL 10


>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPWRYDA 8
PPW+++A
Sbjct: 268 PPWKFEA 274


>sp|Y2191_ARCFU|UNCHARACTERIZED protein AF_2191|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 RYDAEV 10
RYDAEV
Sbjct: 93 RYDAEV 98


>sp|GGR_METAR|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocella arvoryzae (strain DSM 22066

Query: 5 RYDAEV 10
RYDAEV
Sbjct: 322 RYDAEV 327


>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 1 IPPWR 5
+PPWR
Sbjct: 190 LPPWR 194


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PPWRYDAE 9
PP+RY AE
Sbjct: 146 PPFRYIAE 153


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PPWRYDA 8
PPW+++A
Sbjct: 276 PPWKFEA 282


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 4 WRYDAE 9
WRYDA+
Sbjct: 399 WRYDAQ 404


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 PPWRYDAEV 10
PPW Y A V
Sbjct: 671 PPWLYAASV 679


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IPPWR 5
IPPW+
Sbjct: 77 IPPWK 81


>sp|Y485_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IPPWRYDAE 9
I PW+ D E
Sbjct: 120 IRPWKEDTE 128


>sp|MDH_PICTO|MALATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 2 PPWRYDAEV 10
P W YD ++
Sbjct: 52 PHWGYDLDI 60


>sp|AROD_IGNH4|3-DEHYDROQUINATE dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PPWRYDA 8
PPWR +A
Sbjct: 74 PPWRGEA 80


>sp|RS15_PYRFU|SMALL ribosomal subunit protein uS15|Pyrococcus furiosus (strain ATCC

Query: 4 WRYDAEV 10
WRYD E
Sbjct: 146 WRYDPET 152


>sp|RS15_IGNH4|SMALL ribosomal subunit protein uS15|Ignicoccus hospitalis (strain KIN4/I

Query: 2 PPWRYDAE 9
P W+YD E
Sbjct: 135 PDWKYDPE 142


>sp|RS15_AERPE|SMALL ribosomal subunit protein uS15|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPWRYDAE 9
P W+YD E
Sbjct: 135 PDWKYDPE 142


>sp|RS15_PYRAB|SMALL ribosomal subunit protein uS15|Pyrococcus abyssi (strain GE5 /

Query: 4 WRYDAE 9
WRYD E
Sbjct: 146 WRYDPE 151


>sp|RS15_PYRHO|SMALL ribosomal subunit protein uS15|Pyrococcus horikoshii (strain ATCC

Query: 4 WRYDAE 9
WRYD E
Sbjct: 146 WRYDPE 151


>sp|RS15_THEKO|SMALL ribosomal subunit protein uS15|Thermococcus kodakarensis (strain

Query: 4 WRYDAE 9
WRYD E
Sbjct: 139 WRYDPE 144


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WRYDA 8
W+YDA
Sbjct: 36 WKYDA 40


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IPPWRYDA 8
+PPW Y A
Sbjct: 57 MPPWAYFA 64


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 4 WRYDAE 9
WRYD E
Sbjct: 436 WRYDYE 441


>sp|Y384_ARCFU|UPF0252 protein AF_0384|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WRYDAE 9
WRYD E
Sbjct: 33 WRYDYE 38




120|Sequence|596|605|YDAEVVAIAQ

>sp|THI4_SULAC|THIAMINE thiazole synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YDAEVVAIAQ 10
+DAEVVA+A
Sbjct: 179 HDAEVVAVAS 188


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DAEVVAIAQ 10
DAE+ AIAQ
Sbjct: 48 DAEIHAIAQ 56


>sp|SYH_METMA|HISTIDINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DAEVVAIA 9
DAEV+A+A
Sbjct: 136 DAEVIALA 143


>sp|SYH_METAC|HISTIDINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DAEVVAIA 9
DAEV+A+A
Sbjct: 136 DAEVIALA 143


>sp|THI4_PYRNV|THIAMINE thiazole synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YDAEVVAIAQ 10
+DAEV++IA
Sbjct: 169 HDAEVISIAS 178


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DAEVVAIAQ 10
DAE+ A+AQ
Sbjct: 48 DAEIHAVAQ 56


>sp|THI4_PYRIL|THIAMINE thiazole synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YDAEVVAIA 9
+DAEV++IA
Sbjct: 169 HDAEVISIA 177


>sp|THI4_PYRCJ|THIAMINE thiazole synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YDAEVVAIA 9
+DAEVV++A
Sbjct: 169 HDAEVVSVA 177


>sp|THI4_PYRAE|THIAMINE thiazole synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YDAEVVAIA 9
+DAEVV++A
Sbjct: 169 HDAEVVSVA 177


>sp|Y2191_ARCFU|UNCHARACTERIZED protein AF_2191|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YDAEVVAIA 9
YDAEVV +
Sbjct: 94 YDAEVVVVG 102


>sp|THI4_METS5|THIAMINE thiazole synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 YDAEVVAIAQ 10
+DAEV+++A
Sbjct: 175 HDAEVISVAS 184


>sp|THI4_ARCFU|THIAMINE thiazole synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YDAEVVAIA 9
+DAEV+++A
Sbjct: 176 HDAEVISVA 184


>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DAEVVAIA 9
DAEV+A+A
Sbjct: 138 DAEVIALA 145


>sp|THI4_SACS2|THIAMINE thiazole synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YDAEVVAIA 9
+DAEV+++A
Sbjct: 177 HDAEVISVA 185


>sp|THI4_SACI4|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YDAEVVAIA 9
+DAEV+++A
Sbjct: 177 HDAEVISVA 185


>sp|THI4_SULTO|THIAMINE thiazole synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YDAEVVAIA 9
+DAEV+++A
Sbjct: 180 HDAEVISVA 188


>sp|THI4_SACI7|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 YDAEVVAIA 9
+DAEV+++A
Sbjct: 177 HDAEVISVA 185


>sp|THI4_SACI6|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YDAEVVAIA 9
+DAEV+++A
Sbjct: 177 HDAEVISVA 185


>sp|THI4_SACI3|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 YDAEVVAIA 9
+DAEV+++A
Sbjct: 177 HDAEVISVA 185


>sp|THI4_SACI2|THIAMINE thiazole synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 YDAEVVAIA 9
+DAEV+++A
Sbjct: 177 HDAEVISVA 185


>sp|THI4_SACI1|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 YDAEVVAIA 9
+DAEV+++A
Sbjct: 177 HDAEVISVA 185


>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 1 YDAEVVAIAQ 10
YD +V+A+ +
Sbjct: 149 YDTDVIAVIE 158


>sp|THI4_PYRAR|THIAMINE thiazole synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YDAEVVAIA 9
+DAEV+++A
Sbjct: 169 HDAEVISVA 177


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC

Query: 1 YDAEVVAI 8
YD E+VA+
Sbjct: 71 YDKEIVAL 78




121|Sequence|601|610|VAIAQKFAAL

>sp|RL6_PYRFU|LARGE ribosomal subunit protein uL6|Pyrococcus furiosus (strain ATCC

Query: 1 VAIAQKFAA 9
VAIA+ FAA
Sbjct: 65 VAIARTFAA 73




122|Sequence|606|615|KFAALRASLV

***** No hits found ******


123|Sequence|611|620|RASLVAPLLL

>sp|Y103_METJA|UNCHARACTERIZED protein MJ0103|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LVAPLLL 10
L+APLLL
Sbjct: 263 LIAPLLL 269


>sp|RNH2_CENSY|RIBONUCLEASE HII|Cenarchaeum symbiosum (strain A)

Query: 1 RASLVAPLLL 10
R SLV PL++
Sbjct: 11 RGSLVGPLVI 20




124|Sequence|616|625|APLLLELAGE

>sp|MER_METTI|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanolobus tindarius

Query: 1 APLLLELAGE 10
P +LELAGE
Sbjct: 159 GPKMLELAGE 168


>sp|MER_METMA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 APLLLELAGE 10
P +LELAGE
Sbjct: 159 GPKMLELAGE 168


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 APLLLELA 8
APLLLELA
Sbjct: 369 APLLLELA 376


>sp|MER_METAC|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 APLLLELAGE 10
P +LELAGE
Sbjct: 159 GPKMLELAGE 168


>sp|MER_METBF|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 APLLLELAGE 10
P +LELAGE
Sbjct: 159 GPKMLELAGE 168


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 APLLLELAGE 10
PLL E AGE
Sbjct: 868 GPLLKEKAGE 877


>sp|LEUD2_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 APLLLELAG 9
APL L++AG
Sbjct: 71 APLALKIAG 79


>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 2 PLLLELAGE 10
P+LLEL+ E
Sbjct: 242 PILLELSQE 250


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 APLLLELAG 9
AP+ LE+AG
Sbjct: 423 APVELEIAG 431


>sp|MER_METTH|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PLLLELAGE 10
P++L+ AGE
Sbjct: 155 PMMLKTAGE 163


>sp|MER_METTM|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 PLLLELAGE 10
P++L+ AGE
Sbjct: 155 PMMLKTAGE 163


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 3 LLLELAGE 10
LL+EL GE
Sbjct: 226 LLIELTGE 233


>sp|GPMI_HALMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloarcula marismortui (strain ATCC 43049

Query: 4 LLELAGE 10
L+ELAGE
Sbjct: 143 LIELAGE 149


>sp|PC2DH_METBF|PRECORRIN-2 dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PLLLELAG 9
PL+L+L+G
Sbjct: 9 PLMLDLSG 16




125|Sequence|621|630|ELAGEVTDTG

>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ELAGEVTDT 9
ELAG++ DT
Sbjct: 272 ELAGKIADT 280


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GEVTDTG 10
GEVTDTG
Sbjct: 331 GEVTDTG 337


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 4 GEVTDTG 10
GEVTDTG
Sbjct: 330 GEVTDTG 336


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 4 GEVTDTG 10
GEVTDTG
Sbjct: 330 GEVTDTG 336


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 ELAGEVTDTG 10
ELA E TD G
Sbjct: 404 ELASECTDCG 413


>sp|MOAA_SULAC|PROBABLE GTP 3',8-cyclase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELAGEVTDTG 10
ELAG++ D G
Sbjct: 98 ELAGKLKDAG 107


>sp|MER_METAC|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ELAGEVTD 8
ELAGEV D
Sbjct: 164 ELAGEVAD 171


>sp|MER_METTI|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanolobus tindarius

Query: 1 ELAGEVTD 8
ELAGEV+D
Sbjct: 164 ELAGEVSD 171


>sp|MER_METMA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ELAGEVTD 8
ELAGEV D
Sbjct: 164 ELAGEVAD 171


>sp|Y833_METJA|UNCHARACTERIZED protein MJ0833|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELAGEVTDT 9
+L GE+T+T
Sbjct: 37 KLTGEITNT 45


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 1 ELAGEVTDTG 10
EL GE++D G
Sbjct: 175 ELIGEMSDAG 184


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 1 ELAGEVTDTG 10
EL GE++D G
Sbjct: 175 ELIGEMSDAG 184


>sp|MER_METBF|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ELAGEVTD 8
ELAGE+ D
Sbjct: 164 ELAGEIAD 171


>sp|Y1322_METST|UPF0280 protein Msp_1322|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 AGEVTDTG 10
AGE+ +TG
Sbjct: 71 AGEIANTG 78


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ELAGEVTDTG 10
E+AGEV + G
Sbjct: 67 EIAGEVVELG 76


>sp|RS8_ARCFU|SMALL ribosomal subunit protein uS8|Archaeoglobus fulgidus (strain ATCC

Query: 1 ELAGEVTDTG 10
EL+G + D G
Sbjct: 63 ELSGNINDCG 72




126|Sequence|626|635|VTDTGDPIVR

>sp|TFE_METBU|TRANSCRIPTION factor E|Methanococcoides burtonii (strain DSM 6242

Query: 1 VTDTGDPIVR 10
+TD+ DP+VR
Sbjct: 1 MTDSNDPVVR 10


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 VTDTGDPIVR 10
+T+ G PI+R
Sbjct: 8 ITEDGKPIIR 17


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 1 VTDTGDPIVR 10
+T+ G PI+R
Sbjct: 8 ITEDGKPIIR 17


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 VTDTGDPIVR 10
+T+ G PI+R
Sbjct: 8 ITEDGKPIIR 17


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 1 VTDTGDPIVR 10
+T+ G PI+R
Sbjct: 8 ITEDGKPIIR 17


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VTDTGDPIVR 10
+T+ G PI+R
Sbjct: 8 ITEDGKPIIR 17


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 1 VTDTGDPIVR 10
+T+ G P++R
Sbjct: 8 ITEEGKPVIR 17


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VTDTGDPIVR 10
+T+ G P++R
Sbjct: 8 ITEEGKPVIR 17


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 VTDTGDPIVR 10
+T+ G P++R
Sbjct: 8 ITEDGKPVIR 17


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 1 VTDTGDPIVR 10
+T+ G P++R
Sbjct: 8 ITENGKPVIR 17


>sp|ARLY_HALSA|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VTDTGDPIVR 10
+T GDP+VR
Sbjct: 1 MTGGGDPVVR 10


>sp|ARLY_HALS3|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VTDTGDPIVR 10
+T GDP+VR
Sbjct: 1 MTGGGDPVVR 10


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 3 DTGDPI 8
D+GDPI
Sbjct: 286 DSGDPI 291


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 VTDTGDPIVR 10
+T G PI+R
Sbjct: 8 ITKDGKPIIR 17


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VTDTGDPIVR 10
+T+ G P++R
Sbjct: 8 ITEDGKPVIR 17


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 VTDTGDPIVR 10
+T G PI+R
Sbjct: 8 ITKDGKPIIR 17


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 1 VTDTGDPIVR 10
+T+ G P++R
Sbjct: 8 ITEDGKPVIR 17


>sp|MPTA_METMJ|GTP cyclohydrolase MptA|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 DTGDPIVR 10
+ GDPI+R
Sbjct: 139 NEGDPIIR 146


>sp|HIS6_THEON|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus onnurineus

Query: 1 VTDTGDPI 8
+ D GDPI
Sbjct: 26 IRDAGDPI 33


>sp|DPCKG_HALMA|GTP-DEPENDENT dephospho-CoA kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VTDTGDPIV 9
+ D GDPI+
Sbjct: 31 LADAGDPII 39


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 1 VTDTGDPIVR 10
+T+ G P++R
Sbjct: 8 ITEDGKPVIR 17


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 VTDTGDPIVR 10
+T+ G P++R
Sbjct: 8 ITEDGRPVIR 17


>sp|FRHB_METTH|COENZYME F420 hydrogenase subunit beta|Methanothermobacter

Query: 2 TDTGDPIVR 10
TD+GD I++
Sbjct: 223 TDSGDSILK 231


>sp|DPCKG_NATPD|GTP-DEPENDENT dephospho-CoA kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VTDTGDPIV 9
+ D GDP+V
Sbjct: 31 LADAGDPLV 39


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 1 VTDTGDPIV 9
VTD GD +V
Sbjct: 272 VTDQGDIVV 280


>sp|AROC_HALSA|CHORISMATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VTDTGDPI 8
V D GDPI
Sbjct: 279 VADEGDPI 286


>sp|HIS6_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 1 VTDTGDPI 8
+ D GDPI
Sbjct: 26 IRDAGDPI 33


>sp|HIS6_THEGJ|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus gammatolerans

Query: 1 VTDTGDPI 8
+ D GDPI
Sbjct: 26 IRDAGDPI 33


>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 TDTGDP 7
T+TGDP
Sbjct: 153 TETGDP 158


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 VTDTGDPIV 9
+ D GDP+V
Sbjct: 128 LVDPGDPVV 136


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 VTDTGDP 7
VT+TG+P
Sbjct: 399 VTETGEP 405


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VTDTGDPIV 9
V+D GDP+
Sbjct: 367 VSDDGDPLA 375




127|Sequence|631|640|DPIVRPLWWI

>sp|SURE_METTP|5'-NUCLEOTIDASE SurE|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DPIVRPLWWI 10
DP RP +WI
Sbjct: 208 DPRGRPYYWI 217


>sp|SURE_METMA|5'-NUCLEOTIDASE SurE|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DPIVRPLWWI 10
DP RP +WI
Sbjct: 213 DPRGRPYYWI 222


>sp|SURE_METBU|5'-NUCLEOTIDASE SurE|Methanococcoides burtonii (strain DSM 6242

Query: 1 DPIVRPLWWI 10
DP RP +WI
Sbjct: 208 DPRGRPYYWI 217


>sp|SURE_METBF|5'-NUCLEOTIDASE SurE|Methanosarcina barkeri (strain Fusaro /

Query: 1 DPIVRPLWWI 10
DP RP +WI
Sbjct: 213 DPRGRPYYWI 222


>sp|SURE_METMJ|5'-NUCLEOTIDASE SurE|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DPIVRPLWWI 10
DP RP +WI
Sbjct: 205 DPRGRPYYWI 214


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DPIVRPLWWI 10
DP RP +WI
Sbjct: 205 DPRGRPYYWI 214


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DPIVRPLWW 9
DP RPL W
Sbjct: 149 DPFGRPLHW 157


>sp|SURE_METB6|5'-NUCLEOTIDASE SurE|Methanoregula boonei (strain DSM 21154

Query: 1 DPIVRPLWWI 10
DP RP +WI
Sbjct: 205 DPRGRPYFWI 214


>sp|SURE_THEPD|5'-NUCLEOTIDASE SurE|Thermofilum pendens (strain DSM 2475

Query: 1 DPIVRPLWWI 10
DP RP +W+
Sbjct: 198 DPQGRPYYWL 207


>sp|Y3621_HALWD|PUTATIVE metal transport protein HQ_3621A|Haloquadratum walsbyi (strain

Query: 1 DPIVRPLWWI 10
DP+V L+W+
Sbjct: 9 DPLVAGLFWL 18


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DPIVRPL 7
+PIVRP+
Sbjct: 419 EPIVRPI 425


>sp|SURE_METST|5'-NUCLEOTIDASE SurE|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DPIVRPLWWI 10
DP P +WI
Sbjct: 204 DPYGHPYYWI 213


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 PIVRPLWWI 10
P++R L+W+
Sbjct: 42 PVMRSLYWL 50


>sp|GGR_HALVD|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Haloferax volcanii (strain ATCC 29605

Query: 2 PIVRPLW 8
P V PLW
Sbjct: 289 PTVDPLW 295


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 PIVRPLWW 9
P++RPL++
Sbjct: 528 PVIRPLFY 535


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 PIVRPLWW 9
P++RPL++
Sbjct: 528 PVIRPLFY 535


>sp|DEOC_PYRAE|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PIVRPL 7
P+VRPL
Sbjct: 42 PVVRPL 47


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DPIVRPLW 8
DP++ LW
Sbjct: 154 DPVISRLW 161




128|Sequence|636|645|PLWWIAPGDE

>sp|DIPPS_PYRFU|BIFUNCTIONAL IPC transferase and DIPP|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PLWWIAPG 8
P+WW+ G
Sbjct: 341 PIWWVIAG 348


>sp|ENDA_HALSA|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 700922

Query: 3 WWIAPGD 9
WW PGD
Sbjct: 94 WWRDPGD 100


>sp|ENDA_HALS3|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 29341

Query: 3 WWIAPGD 9
WW PGD
Sbjct: 94 WWRDPGD 100


>sp|ARADH_HALVD|L-ARABINOSE 1-dehydrogenase (NAD(P)(+))|Haloferax volcanii (strain ATCC 29605

Query: 4 WIAPGD 9
W++PGD
Sbjct: 196 WLSPGD 201


>sp|Y2294_THEKO|UPF0128 protein TK2294|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LWWIAP 7
LWW+ P
Sbjct: 196 LWWLLP 201


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LWWIAPGDE 10
LW A GDE
Sbjct: 329 LWEAAKGDE 337


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 WWIAPGDE 10
WW G+E
Sbjct: 182 WWSGGGNE 189


>sp|OTC_METST|ORNITHINE carbamoyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 WIAPGDE 10
W++ GDE
Sbjct: 222 WVSMGDE 228


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 WIAPGDE 10
W++ GDE
Sbjct: 222 WVSMGDE 228


>sp|OTC_METMA|ORNITHINE carbamoyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 WIAPGDE 10
W++ GDE
Sbjct: 223 WVSMGDE 229


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 WIAPGDE 10
W++ GDE
Sbjct: 233 WVSMGDE 239


>sp|OTC_METBF|ORNITHINE carbamoyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 4 WIAPGDE 10
W++ GDE
Sbjct: 223 WVSMGDE 229


>sp|OTC_METAC|ORNITHINE carbamoyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 WIAPGDE 10
W++ GDE
Sbjct: 223 WVSMGDE 229


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 PLWWI 5
P WWI
Sbjct: 452 PEWWI 456


>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 WIAPGDE 10
W++ GDE
Sbjct: 223 WVSMGDE 229


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 LWWIAPGD 9
LW+I P D
Sbjct: 321 LWFINPDD 328


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LWWIAP 7
+WW AP
Sbjct: 415 IWWTAP 420




129|Sequence|641|650|APGDETAHRI

>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 3 GDETAHR 9
GDETAH+
Sbjct: 387 GDETAHQ 393


>sp|VAPC6_METJA|RIBONUCLEASE VapC6|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GDETAHRI 10
GDE AH++
Sbjct: 19 GDEKAHKL 26


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PGDETAHRI 10
PGD+ HR+
Sbjct: 184 PGDKMDHRV 192


>sp|GVPF2_HALSA|GAS vesicle protein F2|Halobacterium salinarum (strain ATCC 700922

Query: 1 APGDETA 7
APGD+TA
Sbjct: 122 APGDDTA 128


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GDETAHR 9
G+ETAH+
Sbjct: 382 GEETAHQ 388


>sp|TRM4_METJA|TRNA (cytosine(48)-C(5))-methyltransferase|Methanocaldococcus jannaschii

Query: 1 APGDETAH 8
APG +T H
Sbjct: 93 APGGKTTH 100


>sp|APGM1_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanocaldococcus jannaschii (strain

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 55 PGSDTAH 61


>sp|APGM_METVS|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 52 PGSDTAH 58


>sp|APGM_METM6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C6 /

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 52 PGSDTAH 58


>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 52 PGSDTAH 58


>sp|APGM_METM5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C5 /

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 52 PGSDTAH 58


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 APGDETAH 8
APG +T H
Sbjct: 211 APGGKTTH 218


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella

Query: 1 APGDETAHR 9
+PG + AHR
Sbjct: 51 SPGMQVAHR 59


>sp|RS15_METS5|SMALL ribosomal subunit protein uS15|Metallosphaera sedula (strain ATCC

Query: 2 PGDETAHR 9
PGD+TA +
Sbjct: 104 PGDKTAKK 111


>sp|APGM_PYRAE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 52 PGSDTAH 58


>sp|APGM_PYRIL|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 52 PGSDTAH 58


>sp|APGM_META3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus aeolicus (strain ATCC

Query: 1 APGDETAH 8
PG +TAH
Sbjct: 51 GPGSDTAH 58


>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 52 PGSDTAH 58


>sp|APGM_PYRNV|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 52 PGSDTAH 58


>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 52 PGSDTAH 58


>sp|APGM_IGNH4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 57 PGSDTAH 63


>sp|APGM_PYRCJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum calidifontis (strain DSM

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 52 PGSDTAH 58


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 2 PGDETAH 8
PG +TAH
Sbjct: 54 PGSDTAH 60




130|Sequence|646|655|TAHRIDSQFL

>sp|G1PDH_SULAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfolobus acidocaldarius (strain ATCC

Query: 1 TAHRIDSQFL 10
TA++ID +F+
Sbjct: 106 TAYKIDREFI 115




131|Sequence|651|660|DSQFLIGDTL

>sp|DMSC_HALSA|PUTATIVE dimethyl sulfoxide reductase membrane|Halobacterium salinarum

Query: 2 SQFLIGDTL 10
S FLIGDT+
Sbjct: 296 SNFLIGDTV 304


>sp|KAE1_NANEQ|TRNA N6-adenosine threonylcarbamoyltransferase|Nanoarchaeum equitans

Query: 1 DSQFLIGDTL 10
+S FL+G+TL
Sbjct: 141 NSWFLVGETL 150


>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 1 DSQFLIGDTL 10
D+ +LIG T+
Sbjct: 181 DTHYLIGSTM 190


>sp|TRPB2_METTM|TRYPTOPHAN synthase beta chain 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 DSQFLIGDTL 10
D+ +LIG T+
Sbjct: 179 DTHYLIGSTM 188


>sp|PANB_METS5|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 4 FLIGDTL 10
FL+GD+L
Sbjct: 40 FLVGDSL 46


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DSQFLIGD 8
DS+ L+GD
Sbjct: 351 DSEVLVGD 358


>sp|1A1D_PYRAB|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus abyssi

Query: 3 QFLIGDTL 10
+FL+GD L
Sbjct: 59 EFLLGDAL 66


>sp|PYRI_HALMA|ASPARTATE carbamoyltransferase regulatory chain|Haloarcula marismortui

Query: 1 DSQFLIGD 8
DS+F +GD
Sbjct: 125 DSRFAVGD 132




132|Sequence|656|665|IGDTLLVAPV

>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 GDTLLVAPV 10
GD L+APV
Sbjct: 109 GDKALIAPV 117


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 GDTLLVAPV 10
GD L+APV
Sbjct: 109 GDKALIAPV 117


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GDTLLVAPV 10
GD L+APV
Sbjct: 109 GDKALIAPV 117


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GDTLLVAPV 10
GD L+APV
Sbjct: 109 GDKALIAPV 117


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 GDTLLVAPV 10
GD L+APV
Sbjct: 109 GDKALIAPV 117


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 GDTLLVAPV 10
GD L+APV
Sbjct: 109 GDKALIAPV 117


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 GDTLLVAPV 10
GD L+APV
Sbjct: 109 GDKALIAPV 117


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GDTLLVAPV 10
GD L+APV
Sbjct: 109 GDKALIAPV 117


>sp|NTPPA_METMA|DTTP/UTP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IGDTLLVAP 9
IGD LV+P
Sbjct: 21 IGDNFLVSP 29


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GDTLLVAPV 10
GD L VAPV
Sbjct: 1343 GDLLPVAPV 1351


>sp|CAS2_METKA|CRISPR-ASSOCIATED endoribonuclease Cas2|Methanopyrus kandleri (strain AV19 /

Query: 2 GDTLLVAPV 10
GD+L+V P+
Sbjct: 72 GDSLIVVPM 80


>sp|GGGPS_METTP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IGDTLLV 7
IGDTLLV
Sbjct: 202 IGDTLLV 208


>sp|ILVC2_SACS2|PUTATIVE ketol-acid reductoisomerase 2|Saccharolobus solfataricus (strain

Query: 3 DTLLVAP 9
DT++VAP
Sbjct: 123 DTIMVAP 129


>sp|IF1A1_METBF|TRANSLATION initiation factor 1A 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 GDTLLVAP 9
GD ++VAP
Sbjct: 60 GDVVIVAP 67


>sp|ENDA_HALVD|TRNA-SPLICING endonuclease|Haloferax volcanii (strain ATCC 29605

Query: 2 GDTLLVAPV 10
GD L VAPV
Sbjct: 32 GDDLEVAPV 40


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IGDTLLVAPV 10
+G+T++VAP
Sbjct: 26 LGETIIVAPA 35


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GDTLLVAP 9
GD +LVAP
Sbjct: 299 GDRILVAP 306


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 GDTLLVAP 9
GD+++VAP
Sbjct: 241 GDSIVVAP 248


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 GDTLLVAPV 10
GD +VAPV
Sbjct: 118 GDKAVVAPV 126


>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGDTLLV 7
IGDT+L+
Sbjct: 349 IGDTILI 355


>sp|ATGT_HALSA|TRNA-GUANINE(15) transglycosylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IGDTLLVAPV 10
+GD L+ APV
Sbjct: 159 VGDMLVNAPV 168


>sp|SURE_METST|5'-NUCLEOTIDASE SurE|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IGDTLLVAPV 10
+G T LVAP+
Sbjct: 26 LGQTTLVAPL 35




133|Sequence|661|670|LVAPVLEPGK

>sp|ACDB2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 1 LVAPVLEPGK 10
L+AP+L+PG+
Sbjct: 111 LIAPMLKPGR 120


>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 1 LVAPVLEPG 9
L +PV EPG
Sbjct: 93 LASPVFEPG 101


>sp|HPRL2_HALWD|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16790

Query: 4 PVLEPG 9
PVLEPG
Sbjct: 31 PVLEPG 36


>sp|HPRL2_HALWC|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16854

Query: 4 PVLEPG 9
PVLEPG
Sbjct: 31 PVLEPG 36


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 PVLEPGK 10
PV+ PGK
Sbjct: 36 PVVHPGK 42


>sp|IF6_PYRAE|TRANSLATION initiation factor 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LVAPVLEP 8
LV+P+LEP
Sbjct: 113 LVSPLLEP 120


>sp|IF6_PYRAR|TRANSLATION initiation factor 6|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LVAPVLEP 8
LV+P+LEP
Sbjct: 113 LVSPLLEP 120


>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VAPVLEP 8
V+PVLEP
Sbjct: 70 VSPVLEP 76


>sp|Y1347_HALLT|UPF0173 metal-dependent hydrolase Hlac_1347|Halorubrum lacusprofundi

Query: 1 LVAPVLEP 8
++AP LEP
Sbjct: 160 VIAPYLEP 167


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 4 PVLEPGK 10
PV+ PGK
Sbjct: 37 PVIHPGK 43


>sp|HPRL1_HALVD|HGPRTASE-LIKE protein 1|Haloferax volcanii (strain ATCC 29605

Query: 4 PVLEPG 9
P+LEPG
Sbjct: 31 PMLEPG 36


>sp|HPRL_HALBP|HGPRTASE-LIKE protein|Halogeometricum borinquense (strain ATCC 700274

Query: 4 PVLEPG 9
P+LEPG
Sbjct: 31 PMLEPG 36


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 VAPVLEPG 9
+AP+LE G
Sbjct: 124 IAPILENG 131


>sp|PNPH_KORCO|PROBABLE 6-oxopurine nucleoside phosphorylase|Korarchaeum cryptofilum

Query: 2 VAPVLEPG 9
+ P LEPG
Sbjct: 86 INPALEPG 93


>sp|CDPAS_HYPBU|CDP-ARCHAEOL synthase|Hyperthermus butylicus (strain DSM 5456

Query: 4 PVLEPGK 10
PVL PGK
Sbjct: 45 PVLGPGK 51




134|Sequence|666|675|LEPGKQERDV

>sp|ALADH_ARCFU|ALANINE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PGKQERDV 10
PGKQE DV
Sbjct: 221 PGKQELDV 228


>sp|SYTE_AERPE|THREONINE--TRNA ligase editing subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 EPGKQE 7
EPGKQE
Sbjct: 389 EPGKQE 394


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 3 PGKQERDV 10
P KQERD+
Sbjct: 375 PPKQERDL 382


>sp|FEN_METHJ|FLAP endonuclease 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LEPGKQERD 9
L+PG+ +RD
Sbjct: 288 LDPGRIDRD 296


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PGKQERDV 10
PGKQE ++
Sbjct: 702 PGKQEYEI 709


>sp|NDK_NATPD|NUCLEOSIDE diphosphate kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EPGKQERDV 10
EPG ER++
Sbjct: 123 EPGSAEREI 131


>sp|RISC_METJA|RIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGKQERD 9
PGK E+D
Sbjct: 67 PGKAEKD 73




135|Sequence|671|680|QERDVYLPAG

>sp|ASPD_METM5|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 ERDVYLPAG 10
ER +Y+P+G
Sbjct: 115 ERKIYIPSG 123


>sp|ENO_THEVO|ENOLASE volcanium (strain ATCC 51530

Query: 2 ERDVYLPAG 10
E DVY+P G
Sbjct: 23 EADVYIPGG 31


>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RDVYLPAG 10
R +YLP+G
Sbjct: 116 RKIYLPSG 123


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 ERDVYLPAG 10
ERD+ +PAG
Sbjct: 544 ERDLIIPAG 552


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 ERDVYLPAG 10
ERD+ +PAG
Sbjct: 544 ERDLIIPAG 552


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 2 ERDVYLPA 9
ERDV LPA
Sbjct: 545 ERDVILPA 552


>sp|RL10_THEON|LARGE ribosomal subunit protein uL10|Thermococcus onnurineus (strain NA1)

Query: 3 RDVYLPAG 10
RDV +PAG
Sbjct: 119 RDVVIPAG 126


>sp|RL10_THESM|LARGE ribosomal subunit protein uL10|Thermococcus sibiricus (strain DSM

Query: 3 RDVYLPAG 10
RDV +PAG
Sbjct: 119 RDVVVPAG 126


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 DVYLPAG 10
DVYLP G
Sbjct: 444 DVYLPRG 450


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RDVYLP 8
RD+YLP
Sbjct: 300 RDIYLP 305


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 2 ERDVYLPA 9
E++VYLP+
Sbjct: 577 EKEVYLPS 584


>sp|ASPD_METM7|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 3 RDVYLPAG 10
R +Y+P+G
Sbjct: 116 RKIYIPSG 123


>sp|ASPD_METM6|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 3 RDVYLPAG 10
R +Y+P+G
Sbjct: 116 RKIYIPSG 123


>sp|PSTOM_PYRHO|STOMATIN homolog PH1511|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RDVYLPAG 10
+DV LPAG
Sbjct: 164 KDVELPAG 171


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DVYLPAG 10
DVYLP G
Sbjct: 99 DVYLPDG 105


>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ERDVYL 7
ERD+YL
Sbjct: 140 ERDIYL 145


>sp|PSTOM_PYRAB|STOMATIN homolog PYRAB06580|Pyrococcus abyssi (strain GE5 /

Query: 3 RDVYLPAG 10
+DV LPAG
Sbjct: 164 KDVELPAG 171


>sp|ASPD_NITMS|L-ASPARTATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 ERDVYLPAG 10
++ +YLP+G
Sbjct: 116 KKTIYLPSG 124


>sp|Y2328_HALVD|UNCHARACTERIZED isochorismatase family protein HVO_2328|Haloferax volcanii (strain

Query: 4 DVYLPA 9
DVYLPA
Sbjct: 137 DVYLPA 142


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 QERDVYLPAG 10
++ D+YLPA
Sbjct: 268 KDEDLYLPAA 277


>sp|RL10_PYRFU|LARGE ribosomal subunit protein uL10|Pyrococcus furiosus (strain ATCC

Query: 3 RDVYLPAG 10
+DV +PAG
Sbjct: 120 KDVVIPAG 127


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QERDVY 6
QERDVY
Sbjct: 22 QERDVY 27


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 QERDVY 6
QERDVY
Sbjct: 22 QERDVY 27


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DVYLPAG 10
D+Y+P G
Sbjct: 1053 DIYVPTG 1059


>sp|RSAMH_PYRHO|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RDVYLPAG 10
RD++ PAG
Sbjct: 129 RDIFGPAG 136


>sp|RL10_THEGJ|LARGE ribosomal subunit protein uL10|Thermococcus gammatolerans (strain

Query: 3 RDVYLPAG 10
+DV +PAG
Sbjct: 119 KDVVIPAG 126


>sp|RL10_THEKO|LARGE ribosomal subunit protein uL10|Thermococcus kodakarensis (strain

Query: 3 RDVYLPAG 10
+DV +PAG
Sbjct: 119 KDVVIPAG 126


>sp|RL10_PYRAB|LARGE ribosomal subunit protein uL10|Pyrococcus abyssi (strain GE5 /

Query: 3 RDVYLPAG 10
+DV +PAG
Sbjct: 120 KDVVIPAG 127


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 2 ERDVYLPAG 10
ERD+ PAG
Sbjct: 546 ERDLIRPAG 554


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RDVYLP 8
+DVYLP
Sbjct: 436 KDVYLP 441


>sp|PORA_METTM|PYRUVATE synthase subunit PorA|Methanothermobacter marburgensis (strain ATCC

Query: 1 QERDVYLPA 9
++RDV LP+
Sbjct: 154 EDRDVLLPS 162


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 1 QERDVYLPA 9
++RDV LP+
Sbjct: 154 EDRDVLLPS 162


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ERDVYLPAG 10
E VYLPA
Sbjct: 220 EETVYLPAA 228




136|Sequence|676|685|YLPAGKWRSY

>sp|PYRDB_METMA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina mazei (strain

Query: 2 LPAGKWRSY 10
LPAG+ RSY
Sbjct: 4 LPAGRKRSY 12


>sp|PYRI_THEKO|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus kodakarensis

Query: 1 YLPAGKW 7
++PAGKW
Sbjct: 18 HIPAGKW 24


>sp|PYRI_THEGJ|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus gammatolerans

Query: 1 YLPAGKW 7
++PAGKW
Sbjct: 17 HIPAGKW 23


>sp|MEND_HALLT|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 PAGKWR 8
PAG+WR
Sbjct: 337 PAGRWR 342


>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PAGKWR 8
PAG+WR
Sbjct: 327 PAGEWR 332


>sp|CAS5_HALVD|CRISPR-ASSOCIATED protein Cas5|Haloferax volcanii (strain ATCC 29605

Query: 4 AGKWRSY 10
AG WR+Y
Sbjct: 102 AGSWRTY 108


>sp|ARSR_HALSA|PUTATIVE arsenical resistance operon repressor|Halobacterium salinarum

Query: 5 GKWRSY 10
GKWR Y
Sbjct: 106 GKWRKY 111


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 LPAGKWRSY 10
LP GKW +Y
Sbjct: 572 LPRGKWYNY 580


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 LPAGKWRSY 10
LP GKW +Y
Sbjct: 572 LPRGKWYNY 580


>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YLPAGKWRSY 10
Y PA W +Y
Sbjct: 108 YRPAAGWSNY 117


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 2 LPAGKWRSY 10
L A KWR+Y
Sbjct: 198 LRAEKWRNY 206


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PAGKWR 8
PAG WR
Sbjct: 335 PAGGWR 340


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 3 PAGKWR 8
PA KWR
Sbjct: 102 PAAKWR 107


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 PAGKWR 8
PA KWR
Sbjct: 102 PAAKWR 107


>sp|GCS2_NATPD|GLUTAMATE--CYSTEINE ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PAGKWR 8
PA KWR
Sbjct: 102 PAAKWR 107


>sp|ARCH_PYRHO|PROTEIN archease|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LPAGKW 7
LP GKW
Sbjct: 129 LPNGKW 134


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YLPAGKWRSY 10
Y P GK +SY
Sbjct: 1255 YKPLGKAKSY 1264


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PAGKWR 8
PAG WR
Sbjct: 330 PAGGWR 335


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PAGKWR 8
PAG WR
Sbjct: 330 PAGGWR 335


>sp|SYFA_METMP|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain DSM 14266

Query: 4 AGKWRSY 10
+GKW+ Y
Sbjct: 208 SGKWKDY 214


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 LPAGKWRSY 10
L G WR Y
Sbjct: 188 LTTGSWREY 196


>sp|VORD_PYRFU|KETOISOVALERATE oxidoreductase subunit VorD|Pyrococcus furiosus (strain ATCC

Query: 3 PAGKWRSY 10
P G WR++
Sbjct: 37 PTGDWRTF 44


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LPAGKWRSY 10
LPA WR Y
Sbjct: 349 LPADYWRFY 357


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PAGKWRS 9
P GKW++
Sbjct: 99 PKGKWKT 105


>sp|RL2_NITMS|LARGE ribosomal subunit protein uL2|Nitrosopumilus maritimus (strain

Query: 4 AGKWRSY 10
GKWR++
Sbjct: 175 GGKWRNF 181


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 1 YLPAGKW 7
Y PAG+W
Sbjct: 186 YRPAGEW 192


>sp|SYFA_PYRAE|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LPAGKWRSY 10
+ G+WR+Y
Sbjct: 191 IATGRWRNY 199


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LPAGKWRSY 10
+ G+WR+Y
Sbjct: 190 IATGRWRTY 198


>sp|NPD_SACS2|NAD-DEPENDENT protein deacetylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PAGKWRSY 10
P G W+ Y
Sbjct: 36 PQGLWKKY 43


>sp|NPD_SULAC|NAD-DEPENDENT protein deacetylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PAGKWRSY 10
P G W+ Y
Sbjct: 40 PQGLWKKY 47


>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 4 AGKWRSY 10
+GKW Y
Sbjct: 208 SGKWNDY 214


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 4 AGKWRSY 10
+GKW Y
Sbjct: 208 SGKWNDY 214


>sp|FWDD_METJA|PROTEIN FwdD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLPAGKW 7
Y+P G W
Sbjct: 77 YIPMGPW 83


>sp|RS4_NANEQ|SMALL ribosomal subunit protein uS4|Nanoarchaeum equitans (strain

Query: 4 AGKWRSY 10
A KWR+Y
Sbjct: 45 ARKWRAY 51


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 LPAGKWRSY 10
LPA WR Y
Sbjct: 364 LPADYWRFY 372


>sp|PURQ_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YLPAGKWRS 9
Y+PAG++++
Sbjct: 146 YVPAGEYKA 154




137|Sequence|681|690|KWRSYKGELF

>sp|Y688_METJA|UPF0146 protein MJ0688|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KWRSYKGELF 10
K ++YKGE+F
Sbjct: 121 KLKNYKGEVF 130


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 2 WRSYKGELF 10
W S KGE F
Sbjct: 138 WNSTKGECF 146


>sp|KAE1B_METMJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 WRSYKGELF 10
WR+ GE+F
Sbjct: 323 WRTEPGEVF 331


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 WRSYKG 7
WR+Y+G
Sbjct: 263 WRAYRG 268


>sp|ACYP_PYRCJ|ACYLPHOSPHATASE calidifontis (strain DSM 21063

Query: 1 KWRSYKGEL 9
KW YKGE
Sbjct: 93 KWEEYKGEF 101


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 KWRSYKGELF 10
KW + KGE F
Sbjct: 204 KWYNEKGEYF 213


>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KWRSYKGE 8
+WR YK E
Sbjct: 347 EWREYKEE 354


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WRSYKGE 8
W+ YKGE
Sbjct: 140 WKEYKGE 146


>sp|AROK_METAR|SHIKIMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 WRSYKGELF 10
W +Y G +F
Sbjct: 261 WSAYPGRVF 269


>sp|ACYP_PYRAR|ACYLPHOSPHATASE arsenaticum (strain DSM 13514

Query: 1 KWRSYKGEL 9
+W YKGE
Sbjct: 78 RWEEYKGEF 86


>sp|HDRB_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit B|Methanothermobacter

Query: 3 RSYKGEL 9
R YKGE+
Sbjct: 111 REYKGEI 117


>sp|ACYP_PYRAE|ACYLPHOSPHATASE aerophilum (strain ATCC 51768

Query: 1 KWRSYKGEL 9
+W YKGE
Sbjct: 78 QWEEYKGEF 86


>sp|RS13_METS3|SMALL ribosomal subunit protein uS13|Methanobrevibacter smithii (strain

Query: 1 KWRSYKG 7
K RSYKG
Sbjct: 112 KTRSYKG 118


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 2 WRSYKGE 8
W++YKG+
Sbjct: 99 WKAYKGD 105


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 2 WRSYKG 7
WR+Y+G
Sbjct: 115 WRAYRG 120


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 KWRSYKGE 8
++R YKGE
Sbjct: 88 EYREYKGE 95


>sp|Y1094_METJA|UNCHARACTERIZED protein MJ1094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KWRSYKGEL 9
KW ++GE+
Sbjct: 302 KWFEFEGEI 310


>sp|RS13_METTH|SMALL ribosomal subunit protein uS13|Methanothermobacter

Query: 1 KWRSYKG 7
K RSYKG
Sbjct: 112 KTRSYKG 118




138|Sequence|686|695|KGELFDKTPV

>sp|HMDH_HALVD|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Haloferax volcanii (strain ATCC 29605

Query: 2 GELFDKTP 9
GEL D TP
Sbjct: 167 GELLDVTP 174


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 4 LFDKTPV 10
L+DKTP+
Sbjct: 405 LYDKTPI 411


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 1 KGELFDKTPV 10
+GEL DK P+
Sbjct: 235 QGELADKAPL 244


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 KGELFDKTPV 10
+GEL DK P+
Sbjct: 235 QGELADKAPL 244


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 4 LFDKTPV 10
L+DKTP+
Sbjct: 407 LYDKTPI 413


>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 4 LFDKTPV 10
L+DKTP+
Sbjct: 408 LYDKTPI 414


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 4 LFDKTPV 10
L+DKTP+
Sbjct: 407 LYDKTPI 413


>sp|RL5_METS3|LARGE ribosomal subunit protein uL5|Methanobrevibacter smithii (strain

Query: 3 ELFDKTPV 10
++FD+TPV
Sbjct: 34 QMFDQTPV 41


>sp|GYAR_THEGJ|GLYOXYLATE reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GELFDKTP 9
GE+FD P
Sbjct: 59 GEVFDNAP 66


>sp|TRPB_PYRAR|TRYPTOPHAN synthase beta chain|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KGELFDKT 8
+GE FDKT
Sbjct: 265 RGEGFDKT 272


>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 ELFDKTP 9
ELF KTP
Sbjct: 28 ELFKKTP 34


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 ELFDKTP 9
ELF KTP
Sbjct: 30 ELFKKTP 36


>sp|RS3A_METTP|SMALL ribosomal subunit protein eS1|Methanothrix thermoacetophila

Query: 3 ELFDKTPV 10
E+F +TPV
Sbjct: 24 EMFGRTPV 31


>sp|FOLD_METMJ|BIFUNCTIONAL protein FolD|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GELFDKTPV 10
G LF TPV
Sbjct: 122 GRLFSGTPV 130


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 1 KGELFDKTPV 10
KGE+ +TP+
Sbjct: 274 KGEIRQRTPM 283




139|Sequence|691|700|DKTPVLLTDY

>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 1 DKTPVLLTD 9
D TP++LTD
Sbjct: 197 DITPIILTD 205


>sp|Y550_METVS|UPF0280 protein Mevan_0550|Methanococcus vannielii (strain ATCC 35089

Query: 2 KTPVLLTDY 10
K PV LT Y
Sbjct: 45 KNPVFLTTY 53


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DKTPVLLTDY 10
D P+L TDY
Sbjct: 354 DIFPILATDY 363


>sp|PYRC_PYRFU|DIHYDROOROTASE furiosus (strain ATCC 43587

Query: 1 DKTPVLLTDY 10
DK PV+ +D+
Sbjct: 264 DKVPVIASDH 273


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 1 DKTPVLLTDY 10
D PV L DY
Sbjct: 487 DTEPVFLPDY 496


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 1 DKTPVLLTDY 10
D PV L DY
Sbjct: 487 DTEPVFLPDY 496


>sp|PUR7_METBU|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KTPVLLTDY 10
K PVL+ DY
Sbjct: 113 KEPVLVFDY 121


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 1 DKTPVLLTD 9
D P++LTD
Sbjct: 197 DVDPIILTD 205




140|Sequence|696|705|LLTDYPVDLD

>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 4 DYPVDL 9
DYP+DL
Sbjct: 135 DYPIDL 140


>sp|RL10E_METMJ|LARGE ribosomal subunit protein uL16|Methanoculleus marisnigri (strain

Query: 1 LLTDYPVDL 9
L DYPV+L
Sbjct: 39 LTEDYPVEL 47


>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 LTDYPVDLD 10
LTD P+D D
Sbjct: 302 LTDEPIDSD 310


>sp|OGT_METKA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 5 YPVDLD 10
YPVD D
Sbjct: 34 YPVDFD 39


>sp|HEM3_METKA|PROBABLE porphobilinogen deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 LTDYPVDL 9
+ DYPVD+
Sbjct: 88 VVDYPVDV 95


>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri (strain

Query: 1 LLTDYPVDLD 10
L +DY VD+D
Sbjct: 125 LRSDYTVDVD 134


>sp|METE_AERPE|METHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LTDYPVD 8
+ DYPVD
Sbjct: 230 ILDYPVD 236


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 2 LTDYPVD 8
+TDYPV+
Sbjct: 293 VTDYPVE 299


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 1 LLTDYPVD 8
+LT YPV+
Sbjct: 302 ILTQYPVE 309


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LLTDYP 6
L+TDYP
Sbjct: 32 LVTDYP 37


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LTDYPVD 8
+ DYP+D
Sbjct: 11 MADYPID 17


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLTDYPVD 8
+TDYP++
Sbjct: 373 FITDYPIE 380




141|Sequence|701|714|PVDLDEIAYFTWAS

>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 VDLDEIAYFTWA 13
+D+DEIA+ T A
Sbjct: 134 LDMDEIAWLTTA 145


>sp|KAD6_PYRHO|PUTATIVE adenylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VDLDEIAYF 10
V++DE+AYF
Sbjct: 50 VEIDELAYF 58


>sp|KAD6_PYRAB|PUTATIVE adenylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 VDLDEIAYF 10
V++DE+AYF
Sbjct: 50 VEIDELAYF 58


>sp|AMPPA_METMJ|AMP phosphorylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VDLDEIAYFTWAS 14
+D+DE+ Y T A+
Sbjct: 135 LDMDEVEYLTRAT 147


>sp|KAD6_PYRFU|PUTATIVE adenylate kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VDLDEIAYF 10
V++DE+AYF
Sbjct: 50 VEVDELAYF 58


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 2 VDLDEIAYFTWAS 14
+ L ++ YF WAS
Sbjct: 445 LSLSQLVYFAWAS 457


>sp|PANB_HALSA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 PVDLDEIAYFTWA 13
PV +DEIA T A
Sbjct: 60 PVSVDEIASATGA 72


>sp|PANB_HALS3|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 PVDLDEIAYFTWA 13
PV +DEIA T A
Sbjct: 60 PVSVDEIASATGA 72


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 4 LDEIAYFTWA 13
+E+AY WA
Sbjct: 874 FEELAYMAWA 883


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 2 VDLDEIAYFTWA 13
+D+DEIA T A
Sbjct: 134 LDMDEIAALTIA 145


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VDLDEIAYFTWA 13
+D+DEIA T A
Sbjct: 134 LDMDEIAALTIA 145


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VDLDEIAYFTWA 13
+D+DEIA T A
Sbjct: 134 LDMDEIAALTIA 145


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 VDLDEIAYFTWA 13
+D+DEIA T A
Sbjct: 134 LDMDEIAALTIA 145


>sp|NRDR_HALLT|TRANSCRIPTIONAL repressor NrdR|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 DLDEIAYFTWAS 14
DLD++AY + S
Sbjct: 118 DLDKVAYIRFVS 129


>sp|KAE1_IGNH4|TRNA N6-adenosine threonylcarbamoyltransferase|Ignicoccus hospitalis

Query: 1 PVDLDEIAY 9
P DLD +AY
Sbjct: 67 PEDLDAVAY 75


>sp|IDI2_PYRNV|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VDLDEIAYFTWAS 14
V+LDE+ W S
Sbjct: 129 VELDEVKLAEWVS 141


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DEIAYFTWAS 14
DE+ YF W S
Sbjct: 22 DEMYYFDWNS 31


>sp|NK_METTH|NUCLEOSIDE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 DLDEIAYFTWAS 14
D ++I+YF W +
Sbjct: 105 DHNQISYFYWGA 116


>sp|RS10_PYRCJ|SMALL ribosomal subunit protein uS10|Pyrobaculum calidifontis (strain

Query: 1 PVDLDEIA 8
P DLD++A
Sbjct: 18 PADLDQVA 25


>sp|SYD_PICTO|ASPARTATE--TRNA(ASP) ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 DLDEIAYFTWA 13
DLDE+ WA
Sbjct: 10 DLDEVELSGWA 20


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PVDLDEIAYF 10
P ++D+I YF
Sbjct: 35 PEEIDKIVYF 44


>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PVDLDEIA 8
P+D+DE A
Sbjct: 250 PLDIDEFA 257


>sp|Y780_METJA|UNCHARACTERIZED protein MJ0780|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DEIAYF 10
DE+AYF
Sbjct: 99 DEVAYF 104


>sp|UPPP_METTH|UNDECAPRENYL-DIPHOSPHATASE thermautotrophicus (strain ATCC 29096

Query: 3 DLDEIAYFTWA 13
DL AY+ WA
Sbjct: 160 DLYIFAYYCWA 170


>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 1 PVDLDEIAYFTW 12
P++ E+A+ W
Sbjct: 58 PIENAELAFIVW 69


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 VDLDEIAYFTWAS 14
VD DE+ Y T S
Sbjct: 6 VDPDELRYLTGHS 18


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PVDLDEIAYF 10
P ++D+I YF
Sbjct: 35 PEEIDKIIYF 44


>sp|NUCS_SACS2|ENDONUCLEASE NucS|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VDLDEIAYFTWA 13
+DL E+ Y T A
Sbjct: 102 IDLKEVFYITSA 113


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 2 VDLDEIAYFTWAS 14
+DLDE+ W S
Sbjct: 195 LDLDEVEGRLWRS 207


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PVDLDEIAYF 10
P ++D+I YF
Sbjct: 35 PDEVDKIVYF 44


>sp|NUCS_SACI7|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VDLDEIAYFTWA 13
+DL E+ Y T A
Sbjct: 102 IDLKEVFYITSA 113


>sp|NUCS_SACI4|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VDLDEIAYFTWA 13
+DL E+ Y T A
Sbjct: 102 IDLKEVFYITSA 113


>sp|NUCS_SACI3|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 VDLDEIAYFTWA 13
+DL E+ Y T A
Sbjct: 102 IDLKEVFYITSA 113


>sp|NUCS_SACI2|ENDONUCLEASE NucS|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VDLDEIAYFTWA 13
+DL E+ Y T A
Sbjct: 102 IDLKEVFYITSA 113


>sp|NUCS_SACI1|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 VDLDEIAYFTWA 13
+DL E+ Y T A
Sbjct: 102 IDLKEVFYITSA 113


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 8 AYFTWAS 14
AY+TW +
Sbjct: 73 AYYTWGT 79


>sp|IPYR_THEKO|INORGANIC pyrophosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LDEIAYF 10
LDEIA+F
Sbjct: 130 LDEIAHF 136


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 4 LDEIAYF 10
LDE++YF
Sbjct: 270 LDELSYF 276


>sp|IPYR_PYRHO|INORGANIC pyrophosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LDEIAYF 10
LDEIA+F
Sbjct: 130 LDEIAHF 136


>sp|Y2394_METBU|MEMO1 family protein Mbur_2394|Methanococcoides burtonii (strain DSM 6242

Query: 2 VDLDEIAY 9
+D+DE+A+
Sbjct: 109 IDMDEVAH 116


>sp|IPYR_THELN|INORGANIC pyrophosphatase|Thermococcus litoralis (strain ATCC 51850

Query: 4 LDEIAYF 10
LDEIA+F
Sbjct: 130 LDEIAHF 136






THE END