LRRK2_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|ECGQCSGSAM

>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ECGQCSG 7
ECG+C G
Sbjct: 501 ECGECGG 507


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 1 ECGQCSGSA 9
+CG C+G+A
Sbjct: 618 DCGACAGNA 626


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 2 CGQCSGS 8
C QCSGS
Sbjct: 361 CKQCSGS 367


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 ECGQCSG 7
ECG+C G
Sbjct: 501 ECGRCGG 507


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 CGQCSG 7
CGQC G
Sbjct: 1033 CGQCDG 1038


>sp|HDRC2_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 ECGQCSGS 8
+CG C+GS
Sbjct: 38 QCGTCTGS 45


>sp|NIFB_METJA|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus jannaschii

Query: 2 CGQCSGSAM 10
CGQC A+
Sbjct: 262 CGQCRADAV 270


>sp|NIFB_METIM|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus infernus

Query: 2 CGQCSGSAM 10
CGQC A+
Sbjct: 260 CGQCRADAV 268


>sp|HDRC_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 1 ECGQCSGS 8
+CG C+GS
Sbjct: 43 QCGTCTGS 50


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 1 ECGQCSGS 8
+CG C+G+
Sbjct: 493 QCGACAGN 500


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 1 ECGQCSGS 8
+CG C+G+
Sbjct: 495 DCGACAGN 502


>sp|QUEC1_SULTO|7-CYANO-7-DEAZAGUANINE synthase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CGQCS 6
CGQCS
Sbjct: 174 CGQCS 178


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 ECGQCSGS 8
+CG C+GS
Sbjct: 37 QCGTCTGS 44


>sp|HDRC2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C2|Methanococcus

Query: 1 ECGQCSGS 8
+CG C+GS
Sbjct: 36 QCGTCTGS 43


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 2 CGQCSGS 8
C +CSG+
Sbjct: 729 CAECSGT 735


>sp|FLAB2_AERPE|PROBABLE flagellin 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 CGQCSGSA 9
CG SGSA
Sbjct: 119 CGYASGSA 126


>sp|HDRC_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 ECGQCSGS 8
+CG C+GS
Sbjct: 37 QCGTCTGS 44


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CGQCSG 7
CG C+G
Sbjct: 188 CGSCAG 193


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 2 CGQCSG 7
CG C+G
Sbjct: 188 CGSCAG 193


>sp|HDRC_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 ECGQCSGS 8
+CG C+GS
Sbjct: 37 QCGTCTGS 44


>sp|GATA_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus vannielii (strain ATCC

Query: 2 CGQCSG 7
CG CSG
Sbjct: 389 CGICSG 394


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 3 GQCSG 7
GQCSG
Sbjct: 607 GQCSG 611


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 2 CGQCSG 7
CG CSG
Sbjct: 389 CGICSG 394


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 2 CGQCSG 7
CG CSG
Sbjct: 389 CGICSG 394


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 1 ECGQCS 6
ECG+C+
Sbjct: 410 ECGECA 415


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 3 GQCSG 7
GQCSG
Sbjct: 314 GQCSG 318


>sp|TFE_META3|TRANSCRIPTION factor E|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CGQCSG 7
C QC+G
Sbjct: 136 CSQCNG 141


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 3 GQCSG 7
GQCSG
Sbjct: 315 GQCSG 319


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 2 CGQCSG 7
CG CSG
Sbjct: 389 CGICSG 394


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 2 CGQCSG 7
CG CSG
Sbjct: 389 CGICSG 394


>sp|LEUC1_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 2 CGQCSGSAM 10
CG C G M
Sbjct: 362 CGPCLGGHM 370


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 CGQCSGSAM 10
CG C G M
Sbjct: 353 CGACLGGYM 361


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CGQCSGSAM 10
CG C G M
Sbjct: 363 CGPCLGGHM 371


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 1 ECGQCSGS 8
+CG C+G+
Sbjct: 36 QCGTCTGA 43


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 2 CGQCSGSA 9
CG C+G
Sbjct: 139 CGYCNGEG 146


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 2 CGQCSGSAM 10
CG C G+ M
Sbjct: 364 CGPCLGAHM 372


>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 3 GQCSGSAM 10
G C GSA+
Sbjct: 262 GYCGGSAL 269


>sp|HDRC_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina mazei (strain

Query: 2 CGQCSGS 8
CG C+GS
Sbjct: 22 CGTCTGS 28


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CGQCSG 7
CG C G
Sbjct: 188 CGSCQG 193




2|SequenceR|15|6|TEEDEECGQC

>sp|QUEC_THEVO|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 EDEECGQC 10
E+E CG+C
Sbjct: 193 EEEACGEC 200


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TEEDEECGQC 10
+E DE CG C
Sbjct: 190 SENDEACGVC 199


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TEEDEECGQC 10
TE+ E C +C
Sbjct: 592 TEDRESCPKC 601


>sp|RRP42_THEVO|EXOSOME complex component Rrp42|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EEDEECG 8
EED+ CG
Sbjct: 205 EEDQICG 211


>sp|RRP42_THEAC|EXOSOME complex component Rrp42|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EEDEECG 8
EED+ CG
Sbjct: 205 EEDQICG 211


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 6 ECGQC 10
ECG+C
Sbjct: 410 ECGEC 414


>sp|RIBL_METHJ|FAD synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TEEDEECG 8
T+E ECG
Sbjct: 147 TKEQRECG 154




3|SequenceR|20|11|ILKKLTEEDE

>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LKKLTEEDE 10
L+KLTEE++
Sbjct: 226 LRKLTEEND 234


>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 1 ILKKLTEED 9
IL K+TEED
Sbjct: 206 ILNKITEED 214


>sp|PURQ_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ILKKLTEEDE 10
+LKKL E D+
Sbjct: 169 VLKKLYENDQ 178


>sp|Y796_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 ILKKLTEED 9
+LKKL EED
Sbjct: 187 LLKKLNEED 195


>sp|Y555_METJA|PUTATIVE aminopeptidase MJ0555|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ILKKLTEED 9
++K+L+EED
Sbjct: 186 VMKRLSEED 194


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 1 ILKKLTEEDE 10
ILK LT EDE
Sbjct: 63 ILKILTTEDE 72


>sp|CDPAS_NATPD|CDP-ARCHAEOL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LKKLTEED 9
L KLT+ED
Sbjct: 38 LDKLTDED 45


>sp|Y685_METJA|UNCHARACTERIZED ATP-binding protein MJ0685|Methanocaldococcus jannaschii (strain

Query: 2 LKKLTEEDE 10
LKKL E DE
Sbjct: 61 LKKLVERDE 69


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 2 LKKLTEE 8
LKKLTEE
Sbjct: 252 LKKLTEE 258


>sp|IORB_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorB|Thermococcus kodakarensis (strain ATCC

Query: 2 LKKLTEED 9
+KK+ EED
Sbjct: 118 MKKIVEED 125


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 ILKKLTEED 9
I K+TEED
Sbjct: 532 IFPKVTEED 540


>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ILKKLTEEDE 10
IL KLT ED+
Sbjct: 155 ILPKLTTEDK 164


>sp|MIG_PYRAE|THYMINE/URACIL-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ILKKLTEE 8
+LKKL+EE
Sbjct: 98 LLKKLSEE 105




4|SequenceR|25|16|NNLRVILKKL

>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NNLRVILKK 9
NNLR +LKK
Sbjct: 837 NNLRELLKK 845


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NLRVILKKL 10
NL+ +LKKL
Sbjct: 325 NLKSVLKKL 333


>sp|AATC_METAC|A-TYPE ATP synthase subunit C|Methanosarcina acetivorans (strain ATCC

Query: 1 NNLRVILK 8
NNLR+I +
Sbjct: 335 NNLRIIFR 342




5|SequenceR|30|21|KGEQVNNLRV

>sp|AATC_METAC|A-TYPE ATP synthase subunit C|Methanosarcina acetivorans (strain ATCC

Query: 1 KGEQVNNLRV 10
K +VNNLR+
Sbjct: 330 KNNEVNNLRI 339


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KGEQVNNLR 9
+GE VNN++
Sbjct: 387 RGEDVNNIK 395


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 2 GEQVNNLR 9
GE+V+N+R
Sbjct: 685 GERVDNIR 692


>sp|RL10_META3|LARGE ribosomal subunit protein uL10|Methanococcus aeolicus (strain

Query: 1 KGEQVNNLR 9
K E+VNNL+
Sbjct: 13 KIEEVNNLK 21


>sp|TOP6A_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 KGEQVNNLRV 10
KG+ V NLR+
Sbjct: 160 KGKVVGNLRI 169


>sp|RNP2_METM5|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain C5 /

Query: 3 EQVNNLR 9
E+VNNLR
Sbjct: 70 EEVNNLR 76




6|SequenceR|35|26|LTEIQKGEQV

>sp|REG4_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF0864|Pyrococcus furiosus

Query: 1 LTEIQKGEQV 10
+TEI+KGE +
Sbjct: 146 ITEIKKGEDL 155




7|SequenceR|40|31|ELIQVLTEIQ

>sp|GATD_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrobaculum aerophilum (strain ATCC

Query: 1 ELIQVLTEI 9
EL+QVLT++
Sbjct: 261 ELLQVLTDV 269


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 1 ELIQVLTEI 9
ELIQVL EI
Sbjct: 207 ELIQVLQEI 215


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 1 ELIQVLTEIQ 10
ELI VLT+++
Sbjct: 29 ELINVLTKLK 38




8|SequenceR|45|36|FVLLDELIQV

>sp|AROC_THEAC|CHORISMATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FVLLDELIQ 9
FVLLD LIQ
Sbjct: 340 FVLLDLLIQ 348


>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 1 FVLLDELIQV 10
FVLLDE+++V
Sbjct: 328 FVLLDEMLKV 337


>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FVLLDELIQ 9
FVLLDE+++
Sbjct: 328 FVLLDEMLK 336


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LLDELIQV 10
L+DELIQ+
Sbjct: 122 LMDELIQM 129


>sp|Y215_METJA|UNCHARACTERIZED protein MJ0215|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FVLLDEL 7
FV+LDEL
Sbjct: 44 FVILDEL 50


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 2 VLLDELIQV 10
++LDELI+V
Sbjct: 240 LILDELIEV 248


>sp|Y3520_METJA|UNCHARACTERIZED protein MJECL20|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FVLLDEL 7
FV+LDEL
Sbjct: 34 FVILDEL 40


>sp|DAPF_METTP|DIAMINOPIMELATE epimerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FVLLDEL 7
F+L+DEL
Sbjct: 16 FILIDEL 22


>sp|PNPH_PYRFU|6-OXOPURINE nucleoside phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FVLLDELI 8
FV+LD++I
Sbjct: 96 FVILDQII 103


>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 1 FVLLDELIQ 9
F LL+E+IQ
Sbjct: 221 FKLLEEIIQ 229




9|SequenceR|50|41|RESYTFVLLD

>sp|CBID_SACI7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RESYTFVLL 9
R+SY FV++
Sbjct: 194 RQSYDFVVI 202


>sp|CBID_SACI6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RESYTFVLL 9
R+SY FV++
Sbjct: 194 RQSYDFVVI 202


>sp|CBID_SACI4|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RESYTFVLL 9
R+SY FV++
Sbjct: 194 RQSYDFVVI 202


>sp|CBID_SACI3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 RESYTFVLL 9
R+SY FV++
Sbjct: 194 RQSYDFVVI 202


>sp|CBID_SACI2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RESYTFVLL 9
R+SY FV++
Sbjct: 194 RQSYDFVVI 202


>sp|CBID_SACI1|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RESYTFVLL 9
R+SY FV++
Sbjct: 194 RQSYDFVVI 202


>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 1 RESYTFVLLD 10
RESYT L+D
Sbjct: 277 RESYTPDLID 286


>sp|Y1055_METJA|UNCHARACTERIZED protein MJ1055|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ESYTFVLLD 10
E+YTF+ LD
Sbjct: 58 ENYTFIKLD 66




10|SequenceR|55|46|FLKSARESYT

>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 1 FLKSARESY 9
FL++ARE Y
Sbjct: 159 FLETAREKY 167


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 FLKSARESY 9
F+K+ARE++
Sbjct: 129 FMKAARETF 137


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 LKSARESYT 10
LKS R++YT
Sbjct: 321 LKSKRQTYT 329


>sp|Y980_PYRAB|UPF0282 protein PYRAB09800|Pyrococcus abyssi (strain GE5 /

Query: 1 FLKSARE 7
FLK+ARE
Sbjct: 124 FLKNARE 130


>sp|TRPD_PYRIL|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FLKSARE 7
F+KSARE
Sbjct: 56 FVKSARE 62




11|SequenceR|60|51|INKGQFLKSA

>sp|FKBPL_METTH|LONG-TYPE peptidyl-prolyl cis-trans isomerase|Methanothermobacter

Query: 1 INKGQFLK 8
+NKG F+K
Sbjct: 3 VNKGDFIK 10


>sp|Y1259_THEVO|UPF0292 protein TV1259|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NKGQFLK 8
NKG FLK
Sbjct: 65 NKGSFLK 71


>sp|RL1_KORCO|LARGE ribosomal subunit protein uL1|Korarchaeum cryptofilum (strain

Query: 1 INKGQFLKSA 10
I KG+FL A
Sbjct: 69 IGKGEFLSKA 78


>sp|Y638_METJA|UNCHARACTERIZED protein MJ0638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKGQFL 7
NKGQFL
Sbjct: 213 NKGQFL 218




12|SequenceR|65|56|LLPVHINKGQ

>sp|KHSE_HALSA|HOMOSERINE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 4 VHINKG 9
+HINKG
Sbjct: 74 IHINKG 79


>sp|KHSE_HALS3|HOMOSERINE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 4 VHINKG 9
+HINKG
Sbjct: 74 IHINKG 79


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 VHINKGQ 10
VH+ KGQ
Sbjct: 6 VHVKKGQ 12


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 4 VHINKG 9
+HINKG
Sbjct: 82 IHINKG 87


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 4 VHINKG 9
+HINKG
Sbjct: 82 IHINKG 87


>sp|KHSE_METM5|HOMOSERINE kinase|Methanococcus maripaludis (strain C5 /

Query: 4 VHINKG 9
+HINKG
Sbjct: 82 IHINKG 87


>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VHINKG 9
+H+NKG
Sbjct: 471 IHVNKG 476


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 2 LPVHINKG 9
+P H+N G
Sbjct: 315 IPCHVNMG 322


>sp|IDI2_AERPE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LPVHINKGQ 10
+ +H+N GQ
Sbjct: 152 IAIHLNPGQ 160


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 2 LPVHINKG 9
+P H+N G
Sbjct: 315 IPCHVNMG 322


>sp|MTBB3_METBA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina barkeri

Query: 2 LPVHINKG 9
+P H+N G
Sbjct: 267 IPCHVNMG 274


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 2 LPVHINKG 9
+P H+N G
Sbjct: 267 IPCHVNMG 274


>sp|PGP_THESM|PHOSPHOGLYCOLATE phosphatase|Thermococcus sibiricus (strain DSM 12597

Query: 5 HINKGQ 10
H+NKG+
Sbjct: 152 HVNKGE 157


>sp|RL21_KORCO|LARGE ribosomal subunit protein eL21|Korarchaeum cryptofilum (strain

Query: 1 LLPVHINK 8
+LPVH+ K
Sbjct: 88 VLPVHLKK 95




13|SequenceR|70|61|SDLVILLPVH

>sp|AROK_METTP|SHIKIMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SDLVILLP 8
SD+V+L+P
Sbjct: 161 SDVVLLIP 168


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 1 SDLVILLPV 9
SDLVIL P+
Sbjct: 261 SDLVILHPL 269


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 SDLVILLPV 9
SD+V+ +PV
Sbjct: 639 SDIVLTIPV 647




14|SequenceR|75|66|AVRMYSDLVI

>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 1 AVRMYSDL 8
A+R+YSDL
Sbjct: 527 AIRLYSDL 534


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 RMYSDL 8
RMYSDL
Sbjct: 312 RMYSDL 317


>sp|OGT_ARCFU|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VRMYSDL 8
VRMYSD+
Sbjct: 80 VRMYSDI 86


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AVRMYSDLVI 10
A+RMYS VI
Sbjct: 633 AIRMYSPDVI 642


>sp|MEND_HALLT|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 AVRMYSDL 8
AVR Y DL
Sbjct: 129 AVRFYKDL 136


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 4 MYSDLVI 10
MYSD+V+
Sbjct: 640 MYSDIVL 646




15|SequenceR|80|71|VQQVSAVRMY

***** No hits found ******


16|SequenceR|85|76|LLSWGVQQVS

>sp|METE_SACS2|METHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LSWGVQQVS 10
+SWGV+ V+
Sbjct: 190 VSWGVEAVN 198


>sp|METE_SACI7|METHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LSWGVQQVS 10
+SWGV+ V+
Sbjct: 190 VSWGVEAVN 198


>sp|METE_SACI6|METHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LSWGVQQVS 10
+SWGV+ V+
Sbjct: 190 VSWGVEAVN 198


>sp|METE_SACI4|METHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LSWGVQQVS 10
+SWGV+ V+
Sbjct: 190 VSWGVEAVN 198


>sp|METE_SACI3|METHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 LSWGVQQVS 10
+SWGV+ V+
Sbjct: 190 VSWGVEAVN 198


>sp|METE_SACI2|METHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LSWGVQQVS 10
+SWGV+ V+
Sbjct: 190 VSWGVEAVN 198


>sp|METE_SACI1|METHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LSWGVQQVS 10
+SWGV+ V+
Sbjct: 190 VSWGVEAVN 198


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LLSWGVQQV 9
+++WGVQ +
Sbjct: 162 IVAWGVQNL 170




17|SequenceR|90|81|EILKCLLSWG

>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 1 EILKCLLSWG 10
+ILK ++ WG
Sbjct: 514 KILKAIMKWG 523


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LKCLLSWG 10
LKC++S+G
Sbjct: 247 LKCIISYG 254


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 2 ILKCLLSWG 10
ILK ++ WG
Sbjct: 515 ILKAIMKWG 523


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EILKCLLSWG 10
+I+K ++ WG
Sbjct: 514 KIMKAIMKWG 523


>sp|Y1962_ARCFU|UNCHARACTERIZED protein AF_1962|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LKCLLSWG 10
L+C SWG
Sbjct: 17 LRCRRSWG 24


>sp|MTSA_METMA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EILKCLLSW 9
E+L C L W
Sbjct: 81 EVLGCKLDW 89


>sp|MTSA_METBA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina barkeri

Query: 1 EILKCLLSW 9
E+L C L W
Sbjct: 81 EVLGCKLDW 89


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 1 EILKCLLS 8
EI+KCL S
Sbjct: 254 EIMKCLRS 261


>sp|DNAG_METJA|DNA primase DnaG|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EILKCLLS 8
EI+KCL S
Sbjct: 256 EIMKCLRS 263


>sp|TRM56_SACS2|TRNA (cytidine(56)-2'-O)-methyltransferase|Saccharolobus solfataricus

Query: 2 ILKCLLSWG 10
ILK + SWG
Sbjct: 30 ILKVIDSWG 38


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 EILKCLLSW 9
EI+ C+LS+
Sbjct: 434 EIITCVLSY 442


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 5 CLLSWG 10
C+++WG
Sbjct: 478 CVIAWG 483




18|SequenceR|95|86|TGPCVEILKC

>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GPCVEIL 8
GPCVE+L
Sbjct: 196 GPCVEVL 202


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GPCVEIL 8
GPCVE++
Sbjct: 196 GPCVEVI 202


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GPCVEIL 8
GPCVE++
Sbjct: 196 GPCVEVI 202


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PCVEIL 8
PCVEIL
Sbjct: 433 PCVEIL 438


>sp|HJA3_METJA|PROBABLE archaeal histone 3|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GPCVEILK 9
PCV ILK
Sbjct: 7 APCVRILK 14


>sp|Y941_METJA|TPR repeat-containing protein MJ0941|Methanocaldococcus jannaschii

Query: 1 TGPCVEILKC 10
+G C E LKC
Sbjct: 110 SGNCDEALKC 119


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GPCVEI 7
GPC+E+
Sbjct: 200 GPCLEV 205


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GPCVEI 7
GPC+E+
Sbjct: 200 GPCLEV 205


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GPCVEI 7
GPC+E+
Sbjct: 200 GPCLEV 205


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GPCVEI 7
GPC+E+
Sbjct: 200 GPCLEV 205


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GPCVEI 7
GPC+E+
Sbjct: 200 GPCLEV 205


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GPCVEI 7
GPC+E+
Sbjct: 200 GPCLEV 205


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GPCVEI 7
GPC+E+
Sbjct: 200 GPCLEV 205


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GPCVEI 7
GPC+E+
Sbjct: 328 GPCLEV 333


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GPCVEIL 8
GPC E++
Sbjct: 198 GPCYEVI 204


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GPCVEIL 8
GPC E++
Sbjct: 198 GPCYEVI 204


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 GPCVEIL 8
GPC E++
Sbjct: 198 GPCYEVI 204


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 GPCVEIL 8
GPC E++
Sbjct: 198 GPCYEVI 204


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 GPCVEIL 8
GPC E++
Sbjct: 198 GPCYEVI 204


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPCVEIL 8
GPC E++
Sbjct: 196 GPCYEVI 202


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GPCVEIL 8
GPC E++
Sbjct: 198 GPCYEVI 204


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 PCVEILKC 10
PC +LKC
Sbjct: 521 PCRIVLKC 528


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 GPCVEIL 8
GPC E++
Sbjct: 201 GPCFEVV 207


>sp|DNAG_META3|DNA primase DnaG|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GPCVEILK 9
GPC+ +K
Sbjct: 97 GPCIATIK 104


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GPCVEIL 8
G CVE+L
Sbjct: 196 GACVEVL 202


>sp|DPCKG_CENSY|GTP-DEPENDENT dephospho-CoA kinase|Cenarchaeum symbiosum (strain A)

Query: 3 PCVEILKC 10
P VEI++C
Sbjct: 64 PDVEIIRC 71




19|SequenceR|100|91|MLSQMTGPCV

>sp|PELO_METHJ|PROTEIN pelota homolog|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LSQMTGPCV 10
+SQ+TGP V
Sbjct: 183 VSQLTGPLV 191


>sp|THIM_METS3|HYDROXYETHYLTHIAZOLE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 MLSQMTGPCV 10
MLS + G C+
Sbjct: 216 MLSSIVGSCI 225




20|SequenceR|105|96|VDQPGMLSQM

>sp|MCT_HALMA|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDQPGMLSQM 10
VDQPG QM
Sbjct: 340 VDQPGADDQM 349


>sp|RL3_METTH|LARGE ribosomal subunit protein uL3|Methanothermobacter

Query: 1 VDQPGMLS 8
VD+PG+L+
Sbjct: 33 VDEPGLLA 40




21|SequenceR|110|101|EWDNGVDQPG

>sp|Y711_METJA|UNCHARACTERIZED protein MJ0711|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EWDNGV 6
+WDNG+
Sbjct: 166 DWDNGI 171


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 WDNGVDQ 8
WDNG Q
Sbjct: 148 WDNGFTQ 154


>sp|NCPP_SACI4|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 EWDNGVD-QP 9
E DNGVD QP
Sbjct: 34 EVDNGVDKQP 43


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WDNGVDQP 9
W NG D P
Sbjct: 139 WPNGTDSP 146


>sp|RL31_PYRHO|LARGE ribosomal subunit protein eL31|Pyrococcus horikoshii (strain ATCC

Query: 2 WDNGVDQP 9
W+ G+++P
Sbjct: 60 WERGIEKP 67


>sp|RL31_PYRFU|LARGE ribosomal subunit protein eL31|Pyrococcus furiosus (strain ATCC

Query: 2 WDNGVDQP 9
W+ G+++P
Sbjct: 59 WERGIEKP 66


>sp|RL31_METAR|LARGE ribosomal subunit protein eL31|Methanocella arvoryzae (strain DSM

Query: 2 WDNGVDQP 9
W++G+++P
Sbjct: 61 WEHGIEKP 68


>sp|RL31_PYRAB|LARGE ribosomal subunit protein eL31|Pyrococcus abyssi (strain GE5 /

Query: 2 WDNGVDQP 9
W+ G+++P
Sbjct: 59 WERGIEKP 66


>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 2 WDNGVD 7
W NGVD
Sbjct: 269 WANGVD 274


>sp|Y657_METMP|UPF0237 protein MMP0657|Methanococcus maripaludis (strain DSM 14266

Query: 5 GVDQPG 10
GVD+PG
Sbjct: 10 GVDKPG 15


>sp|COBQ_THEON|PROBABLE cobyric acid synthase|Thermococcus onnurineus (strain NA1)

Query: 2 WDNGVD 7
W NGVD
Sbjct: 269 WANGVD 274


>sp|COBQ_THEGJ|PROBABLE cobyric acid synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 WDNGVD 7
W NGVD
Sbjct: 269 WANGVD 274


>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WDNGVD 7
W NGVD
Sbjct: 269 WANGVD 274


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 3 DNGVDQPG 10
D GVD PG
Sbjct: 112 DRGVDAPG 119


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DNGVDQPG 10
D GVD PG
Sbjct: 111 DRGVDAPG 118


>sp|SURE_HALSA|5'-NUCLEOTIDASE SurE|Halobacterium salinarum (strain ATCC 700922

Query: 3 DNGVDQPG 10
D+G+D PG
Sbjct: 13 DDGIDAPG 20


>sp|SURE_HALS3|5'-NUCLEOTIDASE SurE|Halobacterium salinarum (strain ATCC 29341

Query: 3 DNGVDQPG 10
D+G+D PG
Sbjct: 13 DDGIDAPG 20


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 700922

Query: 3 DNGVDQPG 10
D GVD PG
Sbjct: 109 DRGVDAPG 116


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 3 DNGVDQPG 10
D GVD PG
Sbjct: 109 DRGVDAPG 116


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DNGVDQPG 10
D GVD PG
Sbjct: 111 DRGVDAPG 118


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 3 DNGVDQPG 10
D GVD PG
Sbjct: 112 DRGVDAPG 119


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 2 WDN-GVDQPG 10
W N G+DQPG
Sbjct: 593 WRNYGLDQPG 602


>sp|RL31_PYRNV|LARGE ribosomal subunit protein eL31|Pyrobaculum neutrophilum (strain

Query: 2 WDNGVDQP 9
W G+++P
Sbjct: 62 WSRGIEKP 69


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 EWDNGVDQP 9
E+DN D P
Sbjct: 394 EFDNNTDYP 402


>sp|HUTI_PYRAR|IMIDAZOLONEPROPIONASE arsenaticum (strain DSM 13514

Query: 3 DNGVDQPG 10
D G+ QPG
Sbjct: 350 DRGIIQPG 357


>sp|Y770_METJA|UNCHARACTERIZED protein MJ0770|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WDNGVD 7
WD G+D
Sbjct: 22 WDKGID 27


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DNGVDQPG 10
D G D+PG
Sbjct: 319 DEGEDRPG 326




22|SequenceR|115|106|HVGLVEWDNG

>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LVEWDNG 10
+VEWD G
Sbjct: 428 MVEWDKG 434


>sp|RL22_METHJ|LARGE ribosomal subunit protein uL22|Methanospirillum hungatei JF-1

Query: 3 GLVEWDNG 10
GLV WD G
Sbjct: 73 GLVGWDAG 80


>sp|Y711_METJA|UNCHARACTERIZED protein MJ0711|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LVEWDNG 10
+++WDNG
Sbjct: 164 ILDWDNG 170


>sp|RS9_METMA|SMALL ribosomal subunit protein uS9|Methanosarcina mazei (strain ATCC

Query: 3 GLVEWDN 9
G+VEW N
Sbjct: 86 GIVEWTN 92


>sp|RS9_METAC|SMALL ribosomal subunit protein uS9|Methanosarcina acetivorans (strain

Query: 3 GLVEWDN 9
G+VEW N
Sbjct: 86 GIVEWTN 92


>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GLVEWDNG 10
G+ +WD+G
Sbjct: 486 GVADWDDG 493


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 5 VEWDNG 10
+EWDNG
Sbjct: 315 IEWDNG 320


>sp|IF2P_HALMA|PROBABLE translation initiation factor IF-2|Haloarcula marismortui (strain

Query: 1 HVGLVEWDNG 10
+V +V W+NG
Sbjct: 502 NVNVVRWENG 511


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 2 VGLVEWD 8
VGL EWD
Sbjct: 45 VGLPEWD 51


>sp|AIPS_PYRHO|ARCHAETIDYLINOSITOL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GLVEWD 8
GLV WD
Sbjct: 104 GLVRWD 109


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GLVEWDNG 10
LVEW +G
Sbjct: 40 ALVEWGDG 47


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 3 GLVEWDNG 10
LVEW +G
Sbjct: 40 ALVEWGDG 47


>sp|LEUD1_PYRFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GLVEW 7
GLVEW
Sbjct: 153 GLVEW 157


>sp|LEUD1_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 3 GLVEW 7
GLVEW
Sbjct: 153 GLVEW 157


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GLVEWDNG 10
LVEW +G
Sbjct: 40 ALVEWGDG 47


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 VEWDNG 10
+EWD G
Sbjct: 104 IEWDKG 109


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VGLVEWD 8
VG+++WD
Sbjct: 18 VGVLDWD 24


>sp|VHTC_METMA|F420 non-reducing hydrogenase II cytochrome|Methanosarcina mazei (strain

Query: 1 HVGLVEWD 8
HVG++E+D
Sbjct: 211 HVGILEFD 218


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GLVEWDNG 10
G+V+WD G
Sbjct: 73 GVVKWDFG 80


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GLVEWDNG 10
LVEW +G
Sbjct: 40 ALVEWGDG 47


>sp|RS9_METKA|SMALL ribosomal subunit protein uS9|Methanopyrus kandleri (strain AV19

Query: 3 GLVEW 7
GLVEW
Sbjct: 86 GLVEW 90


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HVGLVEWDNG 10
H+G + W++G
Sbjct: 209 HLGQLFWEDG 218


>sp|FLAB1_THEKO|FLAGELLIN B1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HVGLVEWDN 9
H GL W N
Sbjct: 157 HSGLAAWKN 165


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LVEWDNG 10
++EWD G
Sbjct: 186 IIEWDGG 192


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GLVEW 7
GLVEW
Sbjct: 198 GLVEW 202


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GLVEWDNG 10
LVEW +G
Sbjct: 40 ALVEWGDG 47


>sp|IDI2_METBF|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HVGLVEWDNG 10
H+G + WD G
Sbjct: 242 HLGELFWDFG 251


>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 HVGLVEW 7
HVG +EW
Sbjct: 150 HVGEIEW 156


>sp|ALAXM_METMA|ALANYL-TRNA editing protein AlaX-M|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GLVEWD 8
G+++WD
Sbjct: 93 GIIDWD 98


>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain

Query: 4 LVEWDNG 10
+V+W+NG
Sbjct: 58 VVKWENG 64


>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 3 GLVEWD 8
G+++WD
Sbjct: 93 GIIDWD 98




23|SequenceR|120|111|KLILQHVGLV

>sp|YPV9_METTF|UNCHARACTERIZED protein ORF9|Methanothermobacter thermautotrophicus

Query: 1 KLILQHVGL 9
KL L+HVGL
Sbjct: 134 KLFLKHVGL 142


>sp|TRM56_HYPBU|TRNA (cytidine(56)-2'-O)-methyltransferase|Hyperthermus butylicus

Query: 1 KLILQHVGLV 10
K I HVGLV
Sbjct: 26 KRITTHVGLV 35


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KLILQHVG 8
K ILQH G
Sbjct: 143 KRILQHAG 150


>sp|TRM56_METTP|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanothrix

Query: 1 KLILQHVGLV 10
K I HVGLV
Sbjct: 16 KRITTHVGLV 25


>sp|TRM56_IGNH4|TRNA (cytidine(56)-2'-O)-methyltransferase|Ignicoccus hospitalis

Query: 1 KLILQHVGLV 10
K I HVGLV
Sbjct: 16 KRITTHVGLV 25


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 2 LILQHVGL 9
+I QH+GL
Sbjct: 39 MITQHIGL 46


>sp|GCK_SULTO|GLYCERATE 2-kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KLILQHVGL 9
KLIL VGL
Sbjct: 208 KLILNKVGL 216


>sp|AROC_METMA|CHORISMATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KLILQHVGL 9
KL+L H G+
Sbjct: 142 KLLLSHYGI 150




24|SequenceR|125|116|HVTLMKLILQ

***** No hits found ******


25|SequenceR|130|121|NVSANHVTLM

***** No hits found ******


26|SequenceR|135|126|GIVSLNVSAN

>sp|MTBA_METAC|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina acetivorans (strain ATCC

Query: 1 GIVSLNVSAN 10
GIVS+ SAN
Sbjct: 317 GIVSMTPSAN 326


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GIVSLNVSAN 10
GIVS+ SAN
Sbjct: 317 GIVSMTPSAN 326


>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii (strain

Query: 2 IVSLNVSAN 10
IVSLNV N
Sbjct: 224 IVSLNVKTN 232


>sp|THIL_NITMS|THIAMINE-MONOPHOSPHATE kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GIVSLNVSAN 10
GI+S+N +N
Sbjct: 78 GIISINFPSN 87




27|SequenceR|140|131|DLTKLGIVSL

>sp|TRUA_THEON|TRNA pseudouridine synthase A|Thermococcus onnurineus (strain NA1)

Query: 2 LTKLGIV 8
LTKLGI+
Sbjct: 34 LTKLGII 40


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 DLTKLGIVS 9
D+TK+G+V+
Sbjct: 63 DVTKVGMVT 71


>sp|T1SX_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 DLTKLGIV 8
D+TKLG V
Sbjct: 66 DITKLGYV 73


>sp|PYRDB_PYRFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus furiosus (strain

Query: 1 DLTKLGIVS 9
D+TKLG+ +
Sbjct: 167 DITKLGLAA 175


>sp|COXX_SACS2|PROTOHEME IX farnesyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 DLTKLGIVSL 10
L KLG+VSL
Sbjct: 12 KLGKLGVVSL 21


>sp|COXX_SACI6|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DLTKLGIVSL 10
L KLG+VSL
Sbjct: 12 KLGKLGVVSL 21


>sp|COXX_SACI4|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DLTKLGIVSL 10
L KLG+VSL
Sbjct: 12 KLGKLGVVSL 21


>sp|COXX_SACI3|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 DLTKLGIVSL 10
L KLG+VSL
Sbjct: 12 KLGKLGVVSL 21


>sp|COXX_SACI2|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 DLTKLGIVSL 10
L KLG+VSL
Sbjct: 12 KLGKLGVVSL 21


>sp|COXX_SACI1|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 DLTKLGIVSL 10
L KLG+VSL
Sbjct: 12 KLGKLGVVSL 21


>sp|COXX_SACI7|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 DLTKLGIVSL 10
L KLG+VSL
Sbjct: 12 KLGKLGVVSL 21


>sp|PYRDB_THEKO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermococcus kodakarensis

Query: 1 DLTKLGIVS 9
D+TKLG+ +
Sbjct: 170 DITKLGLAA 178


>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 1 DLTKLGIVSL 10
DLT+ G VSL
Sbjct: 289 DLTENGTVSL 298




28|SequenceR|145|136|STLLLDLTKL

***** No hits found ******


29|SequenceR|150|141|LTIKGSTLLL

>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TIKGSTLLL 10
T+KG+T++L
Sbjct: 245 TVKGNTVIL 253




30|SequenceR|155|146|EDLILLTIKG

>sp|Y273_HALLT|PUTATIVE HTH-type transcriptional regulatory protein|Halorubrum

Query: 1 EDLILLTIKG 10
EDL+LL I G
Sbjct: 40 EDLVLLKILG 49


>sp|Y3058_HALWD|PUTATIVE HTH-type transcriptional regulatory protein|Haloquadratum walsbyi

Query: 1 EDLILLTIKG 10
EDL+LL I G
Sbjct: 40 EDLVLLKILG 49


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDLILLTIKG 10
+DL++ TIKG
Sbjct: 31 QDLLIYTIKG 40


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 EDLILLTIKG 10
EDL LLT+K
Sbjct: 755 EDLSLLTVKA 764


>sp|APGM_METPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 2 DLILLTIKG 10
D +LL IKG
Sbjct: 297 DFVLLNIKG 305


>sp|TRMY_THEON|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus onnurineus

Query: 1 EDLILLTIKG 10
ED+I T+KG
Sbjct: 120 EDIIRRTLKG 129


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EDLILLTIKG 10
+DL+L IKG
Sbjct: 272 DDLVLKGIKG 281




31|SequenceR|160|151|FIDSEEDLIL

>sp|DPCKG_AERPE|GTP-DEPENDENT dephospho-CoA kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FIDSEEDLI 9
F++ EEDLI
Sbjct: 123 FVEGEEDLI 131


>sp|DPCKG_METMJ|GTP-DEPENDENT dephospho-CoA kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FIDSEEDL 8
F+D EEDL
Sbjct: 107 FVDGEEDL 114


>sp|DPCKG_METAR|GTP-DEPENDENT dephospho-CoA kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 FIDSEEDL 8
F+D EEDL
Sbjct: 120 FVDGEEDL 127


>sp|DPCKG_SACS2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FIDSEEDLIL 10
F+D EEDL++
Sbjct: 123 FVDGEEDLLV 132


>sp|COFC_METPE|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 2 IDSEEDLI 9
ID EEDL+
Sbjct: 167 IDEEEDLV 174


>sp|GUAAA_IGNH4|GMP synthase [glutamine-hydrolyzing] subunit A|Ignicoccus hospitalis

Query: 1 FIDSEEDLI 9
F+D E+D++
Sbjct: 107 FVDDEDDIL 115


>sp|DPCKG_HYPBU|GTP-DEPENDENT dephospho-CoA kinase|Hyperthermus butylicus (strain DSM 5456

Query: 2 IDSEEDLI 9
+D EEDL+
Sbjct: 118 VDGEEDLL 125


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 IDSEEDLI 9
++SEEDLI
Sbjct: 780 LESEEDLI 787


>sp|PTH_CALMQ|PEPTIDYL-TRNA hydrolase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 IDSEEDLI 9
+DS EDLI
Sbjct: 59 VDSVEDLI 66


>sp|DPCKG_CALMQ|GTP-DEPENDENT dephospho-CoA kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 IDSEEDLI 9
+D EEDL+
Sbjct: 128 VDGEEDLL 135


>sp|SYDND_METKA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 FIDSEEDLI 9
FI+SEED++
Sbjct: 236 FIESEEDVM 244


>sp|DPCKG_ARCFU|GTP-DEPENDENT dephospho-CoA kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FIDSEEDL 8
F+D EEDL
Sbjct: 119 FVDGEEDL 126


>sp|ENDA_METTH|TRNA-SPLICING endonuclease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FIDSEEDL 8
F+D EED+
Sbjct: 153 FLDDEEDI 160


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FIDSEEDLIL 10
F D EED+++
Sbjct: 111 FADREEDVVV 120


>sp|BAX1_ARCFU|ENDONUCLEASE Bax1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FIDSEEDLIL 10
+ D EE+LIL
Sbjct: 131 YADREEELIL 140




32|SequenceR|165|156|DFILMFIDSE

>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DFILMFIDSE 10
D++ +FID E
Sbjct: 200 DYLRIFIDQE 209


>sp|Y398_METJA|UNCHARACTERIZED protein MJ0398|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFILMFIDSE 10
DF+ F DSE
Sbjct: 166 DFLRGFFDSE 175




33|SequenceR|170|161|FSHMADFILM

>sp|TDXH_THEKO|PEROXIREDOXIN kodakarensis (strain ATCC BAA-918

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 36 FSHPADF 42


>sp|TDXH_STAMF|PEROXIREDOXIN marinus (strain ATCC 43588

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 38 FSHPADF 44


>sp|TDXH_PYRHO|PEROXIREDOXIN horikoshii (strain ATCC 700860

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 36 FSHPADF 42


>sp|TDXH_PYRFU|PEROXIREDOXIN furiosus (strain ATCC 43587

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 36 FSHPADF 42


>sp|TDXH_PYRAB|PEROXIREDOXIN abyssi (strain GE5 /

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 36 FSHPADF 42


>sp|TDXH_NANEQ|PEROXIREDOXIN equitans (strain Kin4-M)

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 34 FSHPADF 40


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 34 FSHPADF 40


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 34 FSHPADF 40


>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 34 FSHPADF 40


>sp|TDXH_METJA|PEROXIREDOXIN jannaschii (strain ATCC 43067

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 36 FSHPADF 42


>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 38 FSHPADF 44


>sp|TDXH_HYPBU|PEROXIREDOXIN butylicus (strain DSM 5456

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 38 FSHPADF 44


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 35 FSHPADF 41


>sp|TDXH_AERPE|PEROXIREDOXIN pernix (strain ATCC 700893

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 40 FSHPADF 46


>sp|TDXH2_PICTO|PEROXIREDOXIN 2|Picrophilus torridus (strain ATCC 700027

Query: 1 FSHMADF 7
FSH ADF
Sbjct: 34 FSHPADF 40


>sp|THIN_METTH|THIAMINE-PHOSPHATE synthase ThiN|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SHMADFIL 9
SHMA FI+
Sbjct: 72 SHMARFII 79


>sp|TRM56_METS5|TRNA (cytidine(56)-2'-O)-methyltransferase|Metallosphaera sedula (strain

Query: 1 FSHMADF 7
+ HMADF
Sbjct: 113 YYHMADF 119


>sp|PHOU1_METTH|PHOSPHATE-SPECIFIC transport system accessory protein|Methanothermobacter

Query: 1 FSHMADFILM 10
HM+DF+ M
Sbjct: 125 LKHMSDFVQM 134


>sp|RS19_THEPD|SMALL ribosomal subunit protein uS19|Thermofilum pendens (strain DSM

Query: 2 SHMADFILM 10
+H+ DFI++
Sbjct: 74 THLRDFIIL 82


>sp|Y863_METTH|UNCHARACTERIZED protein MTH_863|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FSHMADFI 8
FSH DF+
Sbjct: 106 FSHYRDFL 113




34|SequenceR|175|166|EDNAPFSHMA

>sp|PCP_THELN|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus litoralis (strain ATCC 51850

Query: 1 EDNAPFSHMA 10
E++AP ++MA
Sbjct: 105 EEDAPLAYMA 114


>sp|COFH1_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanococcus maripaludis (strain DSM

Query: 2 DNAPFSHM 9
+NAP HM
Sbjct: 251 ENAPLHHM 258


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EDNAPFSHMA 10
EDN F H+A
Sbjct: 168 EDNVIFVHIA 177


>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 DNAPFS 7
DNAPF+
Sbjct: 208 DNAPFT 213


>sp|COFH_METM5|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C5 /

Query: 2 DNAPFSHM 9
+NAP HM
Sbjct: 251 ENAPLHHM 258


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 NAPFSHMA 10
+APF H+A
Sbjct: 328 HAPFDHVA 335


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 NAPFSHMA 10
+APF H+A
Sbjct: 328 HAPFDHVA 335


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NAPFSHMA 10
+APF H+A
Sbjct: 328 HAPFDHVA 335


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 NAPFSHMA 10
+APF H+A
Sbjct: 328 HAPFDHIA 335


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 2 DNAPFS 7
DNAPF+
Sbjct: 210 DNAPFT 215


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 NAPFSHMA 10
+APF H+A
Sbjct: 328 HAPFDHVA 335


>sp|SPEH_THEON|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus onnurineus (strain NA1)

Query: 1 EDNAPFSHM 9
ED+ F+HM
Sbjct: 116 EDDETFTHM 124


>sp|SPEH_THEKO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus kodakarensis (strain ATCC

Query: 1 EDNAPFSHM 9
ED+ F+HM
Sbjct: 119 EDDETFTHM 127


>sp|MRE11_NANEQ|DNA double-strand break repair protein|Nanoarchaeum equitans (strain

Query: 1 EDNAPFSHMA 10
ED+ PF MA
Sbjct: 247 EDSRPFIKMA 256




35|SequenceR|180|171|GLKQVEDNAP

>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GLKQVEDNA 9
GLK+VE+N+
Sbjct: 411 GLKEVENNS 419


>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKQVEDNAP 10
L Q++DN+P
Sbjct: 253 LSQIDDNSP 261


>sp|PELO_NATPD|PROTEIN pelota homolog|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GLKQVEDNAP 10
L+ +EDNAP
Sbjct: 207 ALEHIEDNAP 216


>sp|ARFB_METST|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanosphaera stadtmanae (strain ATCC

Query: 1 GLKQVEDNAP 10
GLK+ DN P
Sbjct: 184 GLKEARDNEP 193


>sp|VHUB_METJA|POLYFERREDOXIN protein VhuB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLKQVEDNAP 10
G+K+V+D+ P
Sbjct: 86 GIKKVDDDFP 95


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLKQVEDNA 9
GLKQ+ED
Sbjct: 208 GLKQLEDKT 216


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLKQVEDNAP 10
GLKQ+E P
Sbjct: 66 GLKQIEAGFP 75


>sp|MTM3_METJA|TYPE II methyltransferase M.MjaIII|Methanocaldococcus jannaschii

Query: 2 LKQVEDNAP 10
L Q+E+N P
Sbjct: 17 LSQIEENLP 25


>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 1 GLKQVEDNAP 10
G+K+V+D P
Sbjct: 76 GIKKVDDRFP 85




36|SequenceR|185|176|HLAKCGLKQV

>sp|THI4_SULTO|THIAMINE thiazole synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HLAKCGLKQV 10
+LAK GLK V
Sbjct: 51 YLAKAGLKTV 60


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain

Query: 1 HLAKCG 6
HL KCG
Sbjct: 89 HLGKCG 94


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 HLAKCGLK 8
HL +CG K
Sbjct: 303 HLRECGFK 310


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LAKCGLKQV 10
L++C +KQV
Sbjct: 840 LSQCNVKQV 848


>sp|COFF_METJA|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanocaldococcus jannaschii

Query: 2 LAKCGLK 8
+KCGLK
Sbjct: 142 FSKCGLK 148


>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HLAKCGLKQV 10
H+ CG K+V
Sbjct: 343 HMGICGEKEV 352


>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 2 LAKCGLKQV 10
+AKCG K V
Sbjct: 109 IAKCGAKGV 117


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LAKCGLKQV 10
LAKCG + +
Sbjct: 374 LAKCGFEVI 382


>sp|THI4_SACS2|THIAMINE thiazole synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HLAKCGLKQV 10
+LAK GLK +
Sbjct: 48 YLAKAGLKTL 57


>sp|THI4_SACI7|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 HLAKCGLKQV 10
+LAK GLK +
Sbjct: 48 YLAKAGLKTL 57


>sp|THI4_SACI6|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 HLAKCGLKQV 10
+LAK GLK +
Sbjct: 48 YLAKAGLKTL 57


>sp|THI4_SACI4|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 HLAKCGLKQV 10
+LAK GLK +
Sbjct: 48 YLAKAGLKTL 57


>sp|THI4_SACI3|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 HLAKCGLKQV 10
+LAK GLK +
Sbjct: 48 YLAKAGLKTL 57


>sp|THI4_SACI2|THIAMINE thiazole synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 HLAKCGLKQV 10
+LAK GLK +
Sbjct: 48 YLAKAGLKTL 57


>sp|THI4_SACI1|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 HLAKCGLKQV 10
+LAK GLK +
Sbjct: 48 YLAKAGLKTL 57




37|SequenceR|190|181|REFLVHLAKC

>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 REFLVHLAK 9
R+F+V LAK
Sbjct: 401 RDFIVELAK 409


>sp|SYT_THEKO|THREONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 REFLVHLAK 9
R+F+V LAK
Sbjct: 400 RDFIVELAK 408


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 3 FLVHLAKC 10
FLV+L KC
Sbjct: 765 FLVNLEKC 772


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 REFLVHLAK 9
REF+ LAK
Sbjct: 408 REFITELAK 416


>sp|HEM3_PYRCJ|PROBABLE porphobilinogen deaminase|Pyrobaculum calidifontis (strain DSM

Query: 1 REFLVHLA 8
REFL+H+
Sbjct: 231 REFLMHVG 238


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 EFLVHLAK 9
EF +HLAK
Sbjct: 288 EFKLHLAK 295


>sp|Y541_PYRHO|UNCHARACTERIZED ATP-binding protein PH0541|Pyrococcus horikoshii (strain ATCC

Query: 3 FLVHLAK 9
FL+HL+K
Sbjct: 158 FLIHLSK 164




38|SequenceR|195|186|QEESVREFLV

>sp|Y555_METJA|PUTATIVE aminopeptidase MJ0555|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QEESVREFL 9
+E+SVREF+
Sbjct: 19 REDSVREFM 27


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 2 EESVREFLV 10
EE+VR FLV
Sbjct: 25 EEAVRSFLV 33


>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ESVREFL 9
+SVREFL
Sbjct: 143 QSVREFL 149




39|SequenceR|200|191|VFETLQEESV

>sp|Y4020_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 VFETLQEESV 10
+FE LQ+E V
Sbjct: 288 IFEMLQQEGV 297




40|SequenceR|205|196|YDKNEVFETL

>sp|HYD2D_PYRFU|SULFHYDROGENASE 2 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YDKNEVFETL 10
YDK EVF+ L
Sbjct: 134 YDKEEVFQVL 143


>sp|APGM_META3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus aeolicus (strain ATCC

Query: 2 DKNEVFETL 10
DKNEV+ TL
Sbjct: 329 DKNEVYITL 337


>sp|HIS1_METM7|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 DKNEVFETL 10
D+N+VFET+
Sbjct: 260 DENKVFETV 268


>sp|HIS1_METM6|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 DKNEVFETL 10
D+N+VFET+
Sbjct: 260 DENKVFETV 268


>sp|HIS1_METMP|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 DKNEVFETL 10
D+N+VFET+
Sbjct: 260 DENKVFETV 268


>sp|HIS1_METM5|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 DKNEVFETL 10
D+N+VFET+
Sbjct: 260 DENKVFETV 268


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DKNEVFETL 10
DKN+ FET+
Sbjct: 465 DKNDTFETV 473


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 1 YDKNEVFETL 10
Y+ +++FETL
Sbjct: 181 YEDDQIFETL 190


>sp|PORC_PYRFU|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus furiosus (strain

Query: 1 YDKNEVFE 8
Y+K EVFE
Sbjct: 177 YEKTEVFE 184


>sp|MDH_METMP|MALATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YDKNEVF 7
Y+KN+VF
Sbjct: 138 YEKNQVF 144


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YDKNEVFE 8
YD+ EVF+
Sbjct: 371 YDQQEVFD 378


>sp|DNAG_HALLT|DNA primase DnaG|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 DKNEVFETL 10
D+N VFE L
Sbjct: 249 DRNTVFEAL 257


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DKNEVFETL 10
DKNE F+ L
Sbjct: 180 DKNEAFKML 188


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 1 YDKNEVFE 8
Y +NEVF+
Sbjct: 358 YHQNEVFQ 365


>sp|CSG_METJA|S-LAYER protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDKNEVFETL 10
Y KN ++ETL
Sbjct: 206 YKKNMLYETL 215




41|SequenceR|210|201|SLLIMYDKNE

>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LIMYDKNE 10
++M+DKNE
Sbjct: 409 MVMFDKNE 416


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 IMYDKN 9
IMYD+N
Sbjct: 251 IMYDRN 256


>sp|RRP4_METST|EXOSOME complex component Rrp4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 MYDKNE 10
+YDKNE
Sbjct: 95 LYDKNE 100


>sp|TRPE_SACS2|ANTHRANILATE synthase component 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LIMYDKNE 10
+I+YD NE
Sbjct: 118 IIIYDHNE 125


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 1 SLLIMYDKNE 10
SLLI DKN
Sbjct: 836 SLLIKVDKNS 845




42|SequenceR|215|206|FNTLASLLIM

>sp|SPCS_METMP|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NTLASLLIM 10
NTL SLL M
Sbjct: 315 NTLVSLLSM 323




43|SequenceR|220|211|EEEDKFNTLA

>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EEEDKFN 7
EE++KFN
Sbjct: 238 EEQEKFN 244


>sp|COBQ_METHJ|PROBABLE cobyric acid synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EEEDKFNTLA 10
+++D F+TLA
Sbjct: 452 QDKDPFDTLA 461


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EEDKFNT 8
EE+KFNT
Sbjct: 415 EEEKFNT 421


>sp|SECD_METP4|PROTEIN-EXPORT membrane protein SecD|Methanolacinia petrolearia (strain DSM 11571

Query: 3 EDKFNTLA 10
EDK NTL
Sbjct: 140 EDKVNTLG 147


>sp|MDH_PYRCJ|MALATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EEEDKFN 7
EE++KFN
Sbjct: 284 EEKEKFN 290


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEEDKFNTLA 10
E +DK +TLA
Sbjct: 1062 EHKDKLSTLA 1071




44|SequenceR|225|216|VHLVIEEEDK

>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 2 HLVIEEEDK 10
H VI EEDK
Sbjct: 250 HFVIPEEDK 258


>sp|PELO_SACS2|PROTEIN pelota homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VHLVIEEEDK 10
+HL++E++DK
Sbjct: 26 LHLILEKDDK 35


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain

Query: 1 VHLVIEEE 8
+H ++EEE
Sbjct: 64 IHFLVEEE 71


>sp|HIS1_HALLT|ATP phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 VHLVIEEED 9
VH V+EE D
Sbjct: 262 VHAVVEERD 270


>sp|NAC_PYRFU|NASCENT polypeptide-associated complex protein|Pyrococcus furiosus

Query: 1 VHLVIEEED 9
V LVI EED
Sbjct: 65 VKLVISEED 73


>sp|HIS1_HALWD|ATP phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VHLVIEEED 9
VH+V++E D
Sbjct: 247 VHVVVDERD 255




45|SequenceR|230|221|HLCHLVHLVI

>sp|Y625_METJA|UNCHARACTERIZED ATP-binding protein MJ0625|Methanocaldococcus jannaschii (strain

Query: 1 HLCHLVHL 8
HLCH++ L
Sbjct: 166 HLCHVICL 173


>sp|Y3526_METJA|UNCHARACTERIZED ATP-binding protein MJECL26|Methanocaldococcus jannaschii (strain

Query: 1 HLCHLVHL 8
HLCH++ L
Sbjct: 170 HLCHVICL 177


>sp|Y1076_METJA|UNCHARACTERIZED ATP-binding protein MJ1076|Methanocaldococcus jannaschii (strain

Query: 1 HLCHLVHL 8
HLCH++ L
Sbjct: 166 HLCHVICL 173


>sp|Y1006_METJA|UNCHARACTERIZED ATP-binding protein MJ1006|Methanocaldococcus jannaschii (strain

Query: 1 HLCHLVHL 8
HLCH++ L
Sbjct: 188 HLCHVICL 195


>sp|AGLF_HALVD|UTP--GLUCOSE-1-PHOSPHATE uridylyltransferase AglF|Haloferax volcanii (strain ATCC 29605

Query: 1 HLCHLVH 7
H CHLV
Sbjct: 180 HACHLVQ 186


>sp|CETZ4_HALVD|TUBULIN-LIKE protein CetZ4|Haloferax volcanii (strain ATCC 29605

Query: 3 CHLVH 7
CH+VH
Sbjct: 28 CHIVH 32


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CHLVHLV 9
CH+VH +
Sbjct: 193 CHVVHKI 199


>sp|GUAAA_METAR|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocella arvoryzae

Query: 3 CHLVH 7
CHL+H
Sbjct: 16 CHLIH 20


>sp|MOAC_SACS2|PROBABLE cyclic pyranopterin monophosphate synthase|Saccharolobus

Query: 2 LCHLVHL 8
LCHL+ L
Sbjct: 67 LCHLIPL 73


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 1 HLCHLV 6
H+CH++
Sbjct: 302 HICHML 307


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HLCHLV 6
H+CH++
Sbjct: 299 HICHMM 304


>sp|GUAAA_METBU|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcoides

Query: 1 HLCHLVHLVI 10
CHL+H +
Sbjct: 14 QFCHLIHRTV 23


>sp|Y155_ARCFU|UNCHARACTERIZED protein AF_0155|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CHLVHLVI 10
CH +HL++
Sbjct: 87 CHALHLMV 94




46|SequenceR|235|226|PIALSHLCHL

>sp|Y625_METJA|UNCHARACTERIZED ATP-binding protein MJ0625|Methanocaldococcus jannaschii (strain

Query: 4 LSHLCHL 10
+ HLCH+
Sbjct: 164 MEHLCHV 170


>sp|Y3526_METJA|UNCHARACTERIZED ATP-binding protein MJECL26|Methanocaldococcus jannaschii (strain

Query: 4 LSHLCHL 10
+ HLCH+
Sbjct: 168 MEHLCHV 174


>sp|Y1076_METJA|UNCHARACTERIZED ATP-binding protein MJ1076|Methanocaldococcus jannaschii (strain

Query: 4 LSHLCHL 10
+ HLCH+
Sbjct: 164 MEHLCHV 170


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 4 LSHLCHL 10
+ HLCH+
Sbjct: 186 VQHLCHV 192


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 4 LSHLCHL 10
+ HLCH+
Sbjct: 186 VQHLCHV 192


>sp|Y1006_METJA|UNCHARACTERIZED ATP-binding protein MJ1006|Methanocaldococcus jannaschii (strain

Query: 4 LSHLCHL 10
+ HLCH+
Sbjct: 186 VRHLCHV 192


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 6 HLCHL 10
HLCH+
Sbjct: 194 HLCHV 198


>sp|Y632_METJA|UNCHARACTERIZED ATP-binding protein MJ0632|Methanocaldococcus jannaschii (strain

Query: 6 HLCHL 10
HLCH+
Sbjct: 188 HLCHV 192


>sp|Y1659_METJA|UNCHARACTERIZED ATP-binding protein MJ1659|Methanocaldococcus jannaschii (strain

Query: 6 HLCHL 10
HLCH+
Sbjct: 187 HLCHV 191


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 6 HLCHL 10
HLCH+
Sbjct: 182 HLCHV 186


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 6 HLCHL 10
HLCH+
Sbjct: 180 HLCHV 184


>sp|Y1010_METJA|UNCHARACTERIZED ATP-binding protein MJ1010|Methanocaldococcus jannaschii (strain

Query: 6 HLCHL 10
HLCH+
Sbjct: 191 HLCHV 195


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 6 HLCHL 10
HLCH+
Sbjct: 173 HLCHV 177


>sp|PYRC_PYRFU|DIHYDROOROTASE furiosus (strain ATCC 43587

Query: 5 SHLCHL 10
+H+CH+
Sbjct: 200 AHICHI 205




47|SequenceR|240|231|EVNNCPIALS

>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 EVNNCPIALS 10
+VN CPI L+
Sbjct: 414 DVNTCPINLA 423


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 EVNNCPIALS 10
+VN CPI L+
Sbjct: 413 DVNTCPINLA 422


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 EVNNCPIALS 10
++N CPI L+
Sbjct: 414 DINTCPINLA 423


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 1 EVNNCP 6
E+NNCP
Sbjct: 236 ELNNCP 241


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 VNNCPIAL 9
V+NCPI +
Sbjct: 223 VSNCPICI 230


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 VNNCPIAL 9
V NCPI +
Sbjct: 211 VENCPICI 218


>sp|Y696_METJA|UNCHARACTERIZED protein MJ0696|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VNNCPIALS 10
V NCP++++
Sbjct: 77 VYNCPVSIT 85


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 VNNCPIAL 9
+ NCPI +
Sbjct: 210 IRNCPICI 217


>sp|KHSE_PYRIL|HOMOSERINE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VNNCPIA 8
VNN PIA
Sbjct: 75 VNNIPIA 81


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VNNCPIAL 9
VN+CP+ +
Sbjct: 266 VNDCPVII 273


>sp|FER4_METJA|UNCHARACTERIZED ferredoxin MJ0199|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VNNCPIAL 9
VNNCP+ +
Sbjct: 19 VNNCPMEV 26


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NCPIALS 10
NCPIA +
Sbjct: 221 NCPIATT 227


>sp|Y3521_METJA|UNCHARACTERIZED protein MJECL21|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VNNCPIA 8
+ NCP+A
Sbjct: 16 IRNCPLA 22




48|SequenceR|245|236|GSMLVEVNNC

>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 MLVEVNN 9
M+VE+NN
Sbjct: 170 MIVEINN 176


>sp|Y1086_METJA|UNCHARACTERIZED protein MJ1086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSMLVEVNN 9
GS+L+++NN
Sbjct: 145 GSLLLKLNN 153


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 4 LVEVNNC 10
+VE NNC
Sbjct: 200 IVECNNC 206


>sp|CBIT_THEAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 GSMLVEVNN 9
GSM VE++N
Sbjct: 57 GSMTVEISN 65


>sp|Y448_METJA|UNCHARACTERIZED protein MJ0448|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SMLVEVNN 9
S L+E+NN
Sbjct: 21 SALIEINN 28




49|SequenceR|250|241|YCRVNGSMLV

>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YCRVNGSML 9
YC NGSM+
Sbjct: 283 YCGDNGSMI 291


>sp|Y539_THEKO|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 1 YCRVNGSML 9
Y R+NG +L
Sbjct: 123 YVRINGELL 131


>sp|Y294_THEVO|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma volcanium

Query: 1 YCRVNGSML 9
Y R+NG +L
Sbjct: 125 YVRINGELL 133


>sp|Y1316_THEGJ|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 1 YCRVNGSML 9
Y R+NG +L
Sbjct: 123 YVRINGELL 131


>sp|KAE1_THESM|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus sibiricus

Query: 2 CRVNGSML 9
CR NG+M+
Sbjct: 283 CRDNGAMI 290


>sp|KAE1_THEON|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus onnurineus

Query: 2 CRVNGSML 9
CR NG+M+
Sbjct: 283 CRDNGAMI 290


>sp|KAE1_THEKO|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus kodakarensis

Query: 2 CRVNGSML 9
CR NG+M+
Sbjct: 283 CRDNGAMI 290


>sp|KAE1_THEGJ|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus

Query: 2 CRVNGSML 9
CR NG+M+
Sbjct: 283 CRDNGAMI 290


>sp|KAE1_PYRHO|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus horikoshii

Query: 2 CRVNGSML 9
CR NG+M+
Sbjct: 283 CRDNGAMI 290


>sp|KAE1_PYRFU|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus furiosus

Query: 2 CRVNGSML 9
CR NG+M+
Sbjct: 283 CRDNGAMI 290


>sp|KAE1_PYRAB|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus abyssi (strain

Query: 2 CRVNGSML 9
CR NG+M+
Sbjct: 283 CRDNGAMI 290


>sp|Y1656_METJA|UNCHARACTERIZED protein MJ1656|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CRVNGSM 8
CRVNG +
Sbjct: 164 CRVNGEI 170


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YCRVNGSML 9
YC NG+M+
Sbjct: 282 YCMDNGAMI 290


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YCRVNGSML 9
YC NG+M+
Sbjct: 282 YCMDNGAMI 290


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YCRVNGSML 9
YC NG+M+
Sbjct: 283 YCGDNGAMI 291


>sp|PURA_METS3|ADENYLOSUCCINATE synthetase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 CRVNGS 7
CR+NG+
Sbjct: 272 CRINGA 277


>sp|FLPA_SACS2|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus solfataricus (strain

Query: 1 YCRVNGSMLV 10
+ +VNG ML+
Sbjct: 170 FLKVNGDMLL 179




50|SequenceR|255|246|EVVINYCRVN

>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 3 VINYCR 8
V NYCR
Sbjct: 226 VFNYCR 231


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EVVINY 6
EVVINY
Sbjct: 88 EVVINY 93


>sp|PYRH_SULTO|URIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VVINYCRVN 10
+V+NY R+N
Sbjct: 200 IVMNYKRLN 208


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 4 INYCR 8
+NYCR
Sbjct: 639 VNYCR 643


>sp|NAC_META3|NASCENT polypeptide-associated complex protein|Methanococcus aeolicus

Query: 1 EVVINYCRVN 10
E+V+N C V+
Sbjct: 97 EMVVNQCEVS 106


>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 1 EVVINYCRV 9
EV ++YC++
Sbjct: 336 EVDVSYCQI 344


>sp|Y693_METJA|UNCHARACTERIZED protein MJ0693|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EVVINYCR 8
+ +INYC+
Sbjct: 151 KAIINYCK 158




51|SequenceR|260|251|FAKMAEVVIN

***** No hits found ******


52|SequenceR|265|256|RESMPFAKMA

>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 3 SMPFAKM 9
+MPF+KM
Sbjct: 177 TMPFSKM 183


>sp|MRE11_NANEQ|DNA double-strand break repair protein|Nanoarchaeum equitans (strain

Query: 2 ESMPFAKMA 10
+S PF KMA
Sbjct: 248 DSRPFIKMA 256


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ESMPFAKMA 10
ESMPF + A
Sbjct: 148 ESMPFLEAA 156


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 ESMPFAKMA 10
ESMPF + A
Sbjct: 148 ESMPFLEAA 156


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ESMPFAKMA 10
ESMPF + A
Sbjct: 148 ESMPFLEAA 156


>sp|Y1408_METJA|UNCHARACTERIZED protein MJ1408|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RESMPFAKM 9
RE+ PF KM
Sbjct: 3 REANPFKKM 11


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ESMPFAKMA 10
ESMPF + A
Sbjct: 148 ESMPFLEAA 156


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 2 ESMPFAKMA 10
ESMPF + A
Sbjct: 148 ESMPFLEAA 156




53|SequenceR|270|261|SVEQIRESMP

>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 2 VEQIRESMP 10
VE+IR++MP
Sbjct: 263 VEEIRQNMP 271


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EQIRESMP 10
E+IR++MP
Sbjct: 517 EEIRKAMP 524


>sp|RPO1C_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Sulfurisphaera tokodaii (strain DSM

Query: 1 SVEQIRESMP 10
S+EQIR+ +P
Sbjct: 13 SLEQIRDKLP 22


>sp|HTR1_HALSA|SENSORY rhodopsin I transducer|Halobacterium salinarum (strain ATCC 700922

Query: 1 SVEQIRESM 9
S+EQ+R+S+
Sbjct: 94 SIEQMRQSL 102


>sp|HTR1_HALS3|SENSORY rhodopsin I transducer|Halobacterium salinarum (strain ATCC 29341

Query: 1 SVEQIRESM 9
S+EQ+R+S+
Sbjct: 94 SIEQMRQSL 102


>sp|Y1212_ARCFU|UNCHARACTERIZED protein AF_1212|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SVEQIRESM 9
SVE+IRE++
Sbjct: 208 SVEEIREAV 216


>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 1 SVEQIRESMP 10
S+E+I+E +P
Sbjct: 295 SIEEIKEYIP 304




54|SequenceR|275|266|HLLCCSVEQI

>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 2 LLCCSVEQI 10
++CC+VE +
Sbjct: 117 VVCCAVEGV 125


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 2 LLCCSVEQI 10
++CC+VE +
Sbjct: 117 VVCCAVEGV 125


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 2 LLCCSVEQI 10
++CC+VE +
Sbjct: 117 VVCCAVEGV 125


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 2 LLCCSVEQI 10
++CC+VE +
Sbjct: 117 VVCCAVEGV 125


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 2 LLCCSVEQI 10
++CC+VE +
Sbjct: 117 VVCCAVEGV 125




55|SequenceR|280|271|GLTLRHLLCC

>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GLTLRHLL 8
GLT +HLL
Sbjct: 363 GLTFKHLL 370


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GLTLRHLL 8
GLT +HLL
Sbjct: 363 GLTFKHLL 370


>sp|SYFA_PYRAE|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLTLRHLL 8
GLT +HLL
Sbjct: 364 GLTFKHLL 371


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 2 LTLRHLLC 9
LTL HL+C
Sbjct: 520 LTLLHLVC 527


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 2 LTLRHLLC 9
+TL HL+C
Sbjct: 546 MTLLHLVC 553




56|SequenceR|285|276|INFFNGLTLR

>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 NFFNGLTL 9
++FNG+TL
Sbjct: 188 DYFNGMTL 195


>sp|PNPH_ARCFU|PROBABLE 6-oxopurine nucleoside phosphorylase|Archaeoglobus fulgidus (strain

Query: 1 INFFNGLTL 9
I+FF+G+T+
Sbjct: 102 IDFFSGVTI 110


>sp|SUCC_IGNH4|SUCCINATE--COA ligase [ADP-forming] subunit beta|Ignicoccus hospitalis (strain

Query: 1 INFFNGLTL 9
+N F G+TL
Sbjct: 306 VNIFGGITL 314


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 1 INFFNG 6
IN+FNG
Sbjct: 97 INYFNG 102


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 INFFNGLTLR 10
+N+ +G+T++
Sbjct: 552 VNYLSGITIK 561




57|SequenceR|290|281|ENLVLINFFN

>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENLVLIN 7
ENLVLIN
Sbjct: 14 ENLVLIN 20


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ENLVLINFFN 10
ENL I F N
Sbjct: 72 ENLACIEFLN 81




58|SequenceR|295|286|VFEHVENLVL

>sp|NADE_PYRAB|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus abyssi (strain GE5 /

Query: 3 EHVENLV 9
EHVENLV
Sbjct: 229 EHVENLV 235


>sp|AROD_THEGJ|3-DEHYDROQUINATE dehydratase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VFEHVENLV 9
++EH ENLV
Sbjct: 155 LYEHAENLV 163


>sp|AROD_THEKO|3-DEHYDROQUINATE dehydratase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VFEHVENLV 9
++EH ENL+
Sbjct: 156 LYEHAENLI 164


>sp|Y558_METJA|UNCHARACTERIZED protein MJ0558|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFEHVENLV 9
V EH+ NLV
Sbjct: 38 VSEHIRNLV 46


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VFEHVENL 8
+FEH E L
Sbjct: 236 IFEHAEKL 243


>sp|BRP_HALSA|PROBABLE beta-carotene 15,15'-dioxygenase Brp|Halobacterium salinarum

Query: 2 FEHVENL 8
+EH ENL
Sbjct: 69 YEHFENL 75


>sp|BRP_HALS3|PROBABLE beta-carotene 15,15'-dioxygenase Brp|Halobacterium salinarum

Query: 2 FEHVENL 8
+EH ENL
Sbjct: 69 YEHFENL 75


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 FEHVENLV 9
+EH++NLV
Sbjct: 690 YEHLKNLV 697


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 3 EHVENLVL 10
EHV NLV
Sbjct: 158 EHVTNLVF 165


>sp|RISC_METTM|RIBOFLAVIN synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 EHVENLVL 10
EH +NL++
Sbjct: 120 EHAQNLIM 127


>sp|RISC_METTH|RIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 EHVENLVL 10
EH +NL++
Sbjct: 120 EHAQNLIM 127


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EHVENLVL 10
EH+EN V+
Sbjct: 250 EHIENRVV 257


>sp|RL6_STAMF|LARGE ribosomal subunit protein uL6|Staphylothermus marinus (strain

Query: 2 FEHVENLVL 10
F HV N++L
Sbjct: 39 FSHVRNIIL 47




59|SequenceR|300|291|QVAKVVFEHV

>sp|RL2_METBF|LARGE ribosomal subunit protein uL2|Methanosarcina barkeri (strain

Query: 2 VAKVVFE 8
+AKVVFE
Sbjct: 56 IAKVVFE 62


>sp|BRIX_PYRAE|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrobaculum aerophilum

Query: 1 QVAKVVFEHV 10
++ KVV+ HV
Sbjct: 172 RIKKVVYRHV 181


>sp|HARB_PYRFU|ARCHAEAL histone B|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QVAKVVFEHV 10
Q AKV+ EH+
Sbjct: 24 QAAKVLAEHL 33


>sp|HMDY_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 1 QVAKVVFEHV 10
++AK + EHV
Sbjct: 108 RIAKTIIEHV 117


>sp|ALADH_ARCFU|ALANINE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VAKVVFEH 9
VAKVV+E+
Sbjct: 300 VAKVVYEN 307




60|SequenceR|305|296|NEPYQQVAKV

>sp|SUCC_DESA1|SUCCINATE--COA ligase [ADP-forming] subunit beta|Desulfurococcus amylolyticus

Query: 3 PYQQVAK 9
PY++VAK
Sbjct: 232 PYEKVAK 238


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 NEPYQQVA 8
N PY QVA
Sbjct: 171 NPPYLQVA 178


>sp|FAEHP_METST|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NEPYQQVA 8
N PY QVA
Sbjct: 174 NPPYLQVA 181




61|SequenceR|310|301|IQLAANEPYQ

>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 2 QLAANEPYQ 10
+LAAN+P Q
Sbjct: 292 ELAANDPLQ 300


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 LAANEPY 9
+AANEP+
Sbjct: 118 VAANEPF 124


>sp|GCS2_HALMA|GLUTAMATE--CYSTEINE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IQLAANEPY 9
+ L+AN PY
Sbjct: 164 LALSANSPY 172


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 3 LAANEPY 9
L AN+PY
Sbjct: 133 LTANDPY 139


>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 3 LAANEPY 9
+AANEP+
Sbjct: 118 VAANEPF 124


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LAANEPYQ 10
L AN+PY+
Sbjct: 142 LIANDPYK 149


>sp|GCS2_HALWD|GLUTAMATE--CYSTEINE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IQLAANEPY 9
+ L+AN PY
Sbjct: 165 LALSANSPY 173


>sp|GCS2_NATPD|GLUTAMATE--CYSTEINE ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IQLAANEPY 9
+ L+AN PY
Sbjct: 163 LALSANSPY 171


>sp|GCS2_HALSA|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IQLAANEPY 9
+ L+AN PY
Sbjct: 163 LALSANSPY 171


>sp|GCS2_HALS3|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IQLAANEPY 9
+ L+AN PY
Sbjct: 163 LALSANSPY 171




62|SequenceR|315|306|CSLASIQLAA

>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 CSLASIQLA 9
C+LASI LA
Sbjct: 1308 CNLASINLA 1316




63|SequenceR|320|311|TLLALCSLAS

>sp|CMR3_SACS2|CRISPR system CMR subunit Cmr3|Saccharolobus solfataricus (strain ATCC

Query: 1 TLLALCSLA 9
TL+ LC LA
Sbjct: 300 TLMNLCKLA 308




64|SequenceR|325|316|LFITETLLAL

>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 1 LFITETLLAL 10
LF+TE+ L L
Sbjct: 217 LFVTESFLYL 226




65|SequenceR|330|321|ELDQNLFITE

>sp|UPP_AERPE|URACIL phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ELDQNLFI 8
ELD+N FI
Sbjct: 191 ELDENYFI 198


>sp|RFCS_METHJ|REPLICATION factor C small subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DQNLFITE 10
DQNL +TE
Sbjct: 177 DQNLTVTE 184


>sp|THII_SULTO|PROBABLE tRNA sulfurtransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 QNLFITE 10
+NLF+TE
Sbjct: 285 KNLFVTE 291


>sp|MFNC_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate transaminase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ELDQNLFIT 9
+L QNLFI+
Sbjct: 246 KLQQNLFIS 254




66|SequenceR|335|326|NENKEELDQN

>sp|FAEHP_METHJ|BIFUNCTIONAL enzyme Fae/Hps|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 NKEELDQ 9
NKEE+DQ
Sbjct: 380 NKEEIDQ 386


>sp|Y1560_METJA|UNCHARACTERIZED MFS-type transporter MJ1560|Methanocaldococcus jannaschii (strain

Query: 1 NENKEELD 8
N+NKE++D
Sbjct: 187 NKNKEKID 194


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ENKEELDQ 9
E KEELDQ
Sbjct: 115 EKKEELDQ 122


>sp|FAEHP_METB6|BIFUNCTIONAL enzyme Fae/Hps|Methanoregula boonei (strain DSM 21154

Query: 3 NKEELDQ 9
N+EE+DQ
Sbjct: 380 NREEIDQ 386


>sp|MSRA_METMJ|PEPTIDE methionine sulfoxide reductase MsrA|Methanoculleus marisnigri

Query: 3 NKEELDQN 10
+KEE+DQ+
Sbjct: 117 SKEEMDQS 124


>sp|SYFB_SACI2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NENKEELDQN 10
N NK LD+N
Sbjct: 206 NSNKTRLDEN 215


>sp|SYFB_SACI7|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NENKEELDQN 10
N NK LD+N
Sbjct: 206 NSNKTRLDEN 215


>sp|SYFB_SACI6|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NENKEELDQN 10
N NK LD+N
Sbjct: 206 NSNKTRLDEN 215


>sp|SYFB_SACI4|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NENKEELDQN 10
N NK LD+N
Sbjct: 206 NSNKTRLDEN 215


>sp|SYFB_SACI1|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NENKEELDQN 10
N NK LD+N
Sbjct: 206 NSNKTRLDEN 215




67|SequenceR|340|331|DDNEQNENKE

***** No hits found ******


68|SequenceR|345|336|DEEGEDDNEQ

***** No hits found ******


69|SequenceR|350|341|LWFLKDEEGE

>sp|TRPB1_PYRFU|TRYPTOPHAN synthase beta chain 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WFLKDEEGE 10
+FL+DEEG+
Sbjct: 280 YFLQDEEGQ 288


>sp|TRPB1_PYRAB|TRYPTOPHAN synthase beta chain 1|Pyrococcus abyssi (strain GE5 /

Query: 2 WFLKDEEGE 10
+FL+DEEG+
Sbjct: 280 YFLQDEEGQ 288


>sp|IPYR_SULAC|INORGANIC pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FLKDEEGE 10
++KDEEGE
Sbjct: 91 YMKDEEGE 98


>sp|TRPB_METVO|TRYPTOPHAN synthase beta chain|Methanococcus voltae

Query: 2 WFLKDEEGE 10
+FL+DE+G+
Sbjct: 299 YFLQDEDGQ 307


>sp|TRPB1_ARCFU|TRYPTOPHAN synthase beta chain 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WFLKDEEG 9
+FL+DEEG
Sbjct: 291 YFLQDEEG 298


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 3 FLKDEEGE 10
F+KDE+GE
Sbjct: 263 FVKDEKGE 270


>sp|IPYR_SULTO|INORGANIC pyrophosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 FLKDEEGE 10
+++DEEGE
Sbjct: 91 YMRDEEGE 98


>sp|Y1003_ARCFU|UNCHARACTERIZED protein AF_1003|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LWFLKDEEG 9
LW L+DEEG
Sbjct: 154 LWDLEDEEG 162


>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 2 WFLKDEEGE 10
+FL++EEG+
Sbjct: 282 YFLQNEEGQ 290


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 1 LWF-----LKDEEGE 10
LW+ +KDEEGE
Sbjct: 801 LWYYYKHLIKDEEGE 815


>sp|IPYR_SACS2|INORGANIC pyrophosphatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FLKDEEGE 10
+++DEEGE
Sbjct: 91 YMRDEEGE 98


>sp|RIB7_SACS2|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Saccharolobus solfataricus (strain ATCC

Query: 2 WFLKD 6
WF+KD
Sbjct: 151 WFIKD 155


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FLKDEEGE 10
F K+EEGE
Sbjct: 383 FRKEEEGE 390


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 LWFLKDEEG 9
++FL D EG
Sbjct: 42 VYFLSDHEG 50


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 4 LKDEEGE 10
++DEEGE
Sbjct: 215 IEDEEGE 221


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 4 LKDEEGE 10
+KDEEG+
Sbjct: 549 IKDEEGK 555


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 4 LKDEEGE 10
++DEEGE
Sbjct: 215 IEDEEGE 221


>sp|Y1944_ARCFU|UNCHARACTERIZED protein AF_1944|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LWFLKDE 7
+WFL DE
Sbjct: 64 VWFLSDE 70


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 4 LKDEEGE 10
++DEEGE
Sbjct: 215 IEDEEGE 221


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 2 WFLKDEEGE 10
+ LKDE+G+
Sbjct: 123 YLLKDEDGK 131


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 3 FLKDEEGE 10
F+K++EGE
Sbjct: 332 FIKNKEGE 339


>sp|GLKA_THESM|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 WFLKDEE 8
WF+++EE
Sbjct: 97 WFVENEE 103




70|SequenceR|355|346|KYCAELWFLK

>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 YCAELWFLK 10
YC E W L+
Sbjct: 425 YCEEWWMLE 433


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 YCAELWFLK 10
YC E W L+
Sbjct: 455 YCEEWWILE 463


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 YCAELWFLK 10
YC E W L+
Sbjct: 458 YCEEWWILE 466


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CAELWFLK 10
C ELW LK
Sbjct: 771 CEELWHLK 778


>sp|LYEL_HALSA|LYCOPENE elongase/hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 2 YCAELWFL 9
YCA +W L
Sbjct: 206 YCAGIWLL 213


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 CAELWFLK 10
C E WF K
Sbjct: 30 CVEYWFDK 37




71|SequenceR|360|351|HWTLAKYCAE

>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WTLAKYCAE 10
W +AK CAE
Sbjct: 265 WIMAKECAE 273


>sp|IXTPA_METKA|DITP/XTP pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 5 AKYCAE 10
A+YCAE
Sbjct: 50 ARYCAE 55


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HWTLAKYCAE 10
HW ++ CAE
Sbjct: 425 HWCGSQECAE 434


>sp|ASPD_NITMS|L-ASPARTATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 TLAKYCAE 10
TL KYC++
Sbjct: 259 TLKKYCSD 266


>sp|GAL1_PYRHO|GALACTOKINASE horikoshii (strain ATCC 700860

Query: 1 HWTLAK 6
HW LAK
Sbjct: 269 HWDLAK 274


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 4 LAKYCAE 10
LA+YC E
Sbjct: 111 LARYCPE 117


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 HWTLAKYCA 9
WT+ + CA
Sbjct: 246 QWTIDRMCA 254


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 HWTLAKYCA 9
WT+ + CA
Sbjct: 246 QWTIDRMCA 254


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 2 WTLAKYCAE 10
WT + C+E
Sbjct: 208 WTFVEICSE 216




72|SequenceR|365|356|HKNKRHWTLA

>sp|MTAP_AERPE|S-METHYL-5'-THIOADENOSINE phosphorylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KNKRHWTL 9
KN+RH+T
Sbjct: 120 KNRRHYTF 127


>sp|Y1589_METAC|UPF0228 protein MA_1589|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 NKRHWTLA 10
NK++WTL+
Sbjct: 110 NKKNWTLS 117


>sp|Y511_METAC|UPF0228 protein MA_0511|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 NKRHWTLA 10
NK++WT++
Sbjct: 105 NKKNWTVS 112


>sp|ENDA_PYRAE|TRNA-SPLICING endonuclease|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HKNKRHWTLA 10
H ++ WTLA
Sbjct: 155 HSVRKTWTLA 164


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 HKNKRH 6
H NKRH
Sbjct: 32 HPNKRH 37


>sp|RL15_METST|LARGE ribosomal subunit protein uL15|Methanosphaera stadtmanae (strain

Query: 3 NKRHWT 8
NK HWT
Sbjct: 40 NKHHWT 45


>sp|PDXS_HALWD|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloquadratum walsbyi (strain

Query: 1 HKNKRHWT 8
H +KRH+T
Sbjct: 123 HIDKRHFT 130


>sp|Y1595_METJA|UPF0104 membrane protein MJ1595|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KNKRHW 7
KNKR W
Sbjct: 218 KNKRGW 223


>sp|CSA5A_SACS2|CRISPR type I-A cluster 1/Apern-associated|Saccharolobus solfataricus

Query: 3 NKRHWTL 9
+KR WTL
Sbjct: 12 SKRFWTL 18


>sp|Y474_KORCO|UPF0310 protein Kcr_0474|Korarchaeum cryptofilum (strain OPF8)

Query: 2 KNKRHWT 8
+NKR WT
Sbjct: 117 ENKRKWT 123


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HKNKRHWTL 9
HKN+ W +
Sbjct: 271 HKNRIRWII 279




73|SequenceR|370|361|AAEQVHKNKR

>sp|RS7_METMP|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain DSM

Query: 1 AAEQVHKNKR 10
A+E HKNK+
Sbjct: 141 ASESAHKNKK 150


>sp|RS7_METM5|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain C5

Query: 1 AAEQVHKNKR 10
A++ HKNK+
Sbjct: 141 ASDSAHKNKK 150




74|SequenceR|375|366|NLAWCAAEQV

>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 3 AWCAAEQV 10
AW AAEQV
Sbjct: 204 AWVAAEQV 211


>sp|TKSU_THEKO|TK-SUBTILISIN kodakarensis (strain ATCC BAA-918

Query: 1 NLAWCAA 7
N+AWC +
Sbjct: 152 NIAWCVS 158


>sp|KAE1B_NATPD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 AWCAAEQV 10
AWCA+ V
Sbjct: 11 AWCASAAV 18


>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 LAWCAAEQV 10
+ WC +E+V
Sbjct: 324 IIWCDSEEV 332


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 3 AWCAAEQ 9
AWC++++
Sbjct: 53 AWCSSDE 59




75|SequenceR|380|371|YMLLNNLAWC

>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YMLLNNLAW 9
Y LLN+L W
Sbjct: 183 YYLLNDLVW 191


>sp|PSB_METPS|PROTEASOME subunit beta|Methanocella paludicola (strain DSM 17711

Query: 2 MLLNNLAW 9
MLL+NL W
Sbjct: 89 MLLSNLLW 96


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 3 LLNNLAWC 10
LLN WC
Sbjct: 44 LLNEFPWC 51


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YMLLNNLAW 9
Y +LN+L W
Sbjct: 738 YHMLNDLRW 746


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YMLLNNLAW 9
Y +LN+L W
Sbjct: 758 YTVLNDLRW 766


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YMLLNNLAW 9
Y LL++L W
Sbjct: 740 YQLLDDLKW 748


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YMLLNNLAW 9
Y L+N+L W
Sbjct: 753 YELINDLRW 761


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YMLLNNLAW 9
Y L+N+L W
Sbjct: 753 YELINDLRW 761


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 YMLLNNLAWC 10
Y L+ WC
Sbjct: 183 YQLMQKYTWC 192


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 YMLLNNLAW 9
Y +LN+L W
Sbjct: 758 YSVLNDLRW 766


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YMLLNNLAW 9
Y L+N+L W
Sbjct: 750 YELINDLRW 758


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YMLLNNLAW 9
Y L+N+L W
Sbjct: 753 YELINDLRW 761




76|SequenceR|385|376|HLSNQYMLLN

>sp|COXX2_PICTO|PROTOHEME IX farnesyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 1 HLSNQYMLL 9
H SN YML+
Sbjct: 269 HFSNMYMLM 277


>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 1 HLSNQYMLL 9
LSN+Y++L
Sbjct: 32 QLSNKYLIL 40


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 HLSNQYMLLN 10
H+S Y+L N
Sbjct: 573 HISGTYLLTN 582


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 HLSNQYMLLN 10
H+S Y+L N
Sbjct: 573 HISGTYLLTN 582




77|SequenceR|390|381|DGIKEHLSNQ

>sp|Y862_METTH|UNCHARACTERIZED protein MTH_862|Methanothermobacter thermautotrophicus (strain

Query: 2 GIKEHL 7
GIKEHL
Sbjct: 9 GIKEHL 14


>sp|PFDA_METM7|PREFOLDIN subunit alpha|Methanococcus maripaludis (strain C7 /

Query: 1 DGIKEHLSN 9
D +KE LSN
Sbjct: 20 DKLKEELSN 28


>sp|PFDA_METMP|PREFOLDIN subunit alpha|Methanococcus maripaludis (strain DSM 14266

Query: 1 DGIKEHLSN 9
D +KE LSN
Sbjct: 20 DKLKEELSN 28


>sp|METK_NATPD|S-ADENOSYLMETHIONINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DGIKEHLS 8
DGI EH+S
Sbjct: 37 DGIAEHVS 44


>sp|LYSZ_SULTO|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DGIKEHLSN 9
DGI E LSN
Sbjct: 16 DGIIESLSN 24


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 2 GIKEHLSNQ 10
G+ HLSN+
Sbjct: 376 GVTPHLSNR 384


>sp|COFE_HALMA|COENZYME F420:L-glutamate ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DGIKEH 6
DGI+EH
Sbjct: 138 DGIREH 143


>sp|RL5_PYRAE|LARGE ribosomal subunit protein uL5|Pyrobaculum aerophilum (strain ATCC

Query: 2 GIKEHL 7
GIKEH+
Sbjct: 111 GIKEHI 116


>sp|TRM56_ARCFU|TRNA (cytidine(56)-2'-O)-methyltransferase|Archaeoglobus fulgidus

Query: 1 DGIKEHLS 8
DG+K HL+
Sbjct: 73 DGLKVHLT 80


>sp|MCAL_HALMA|L-MALYL-COA/BETA-METHYLMALYL-COA lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DGIKEHLSNQ 10
DG+ E LSN+
Sbjct: 195 DGLLEALSNE 204


>sp|AROC_METBU|CHORISMATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DGIKEHL 7
D IKEHL
Sbjct: 170 DTIKEHL 176


>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KEHLSN 9
KEH+SN
Sbjct: 311 KEHMSN 316


>sp|TRM56_PYRAB|TRNA (cytidine(56)-2'-O)-methyltransferase|Pyrococcus abyssi (strain

Query: 1 DGIKEHLS 8
DG+K HL+
Sbjct: 75 DGVKVHLT 82




78|SequenceR|395|386|FHGDEDGIKE

>sp|AROK_HALSA|SHIKIMATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GDEDGIKE 10
GDEDGI+E
Sbjct: 252 GDEDGIEE 259


>sp|AROK_HALS3|SHIKIMATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 3 GDEDGIKE 10
GDEDGI+E
Sbjct: 252 GDEDGIEE 259


>sp|TRUA_THEKO|TRNA pseudouridine synthase A|Thermococcus kodakarensis (strain ATCC

Query: 1 FHGDEDGIKE 10
F GDE GIK+
Sbjct: 232 FEGDEKGIKK 241


>sp|MNTP_METLZ|MANGANESE exporter MntP|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FHGDEDGI 8
F GDE+GI
Sbjct: 91 FSGDEEGI 98


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 4 DEDGIKE 10
DEDGIKE
Sbjct: 431 DEDGIKE 437


>sp|RIBL_HALVD|FAD synthase|Haloferax volcanii (strain ATCC 29605

Query: 2 HGDEDGIK 9
H DEDGIK
Sbjct: 94 HHDEDGIK 101


>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FHGDEDGI 8
FHG DG+
Sbjct: 140 FHGAHDGV 147


>sp|RL10E_AERPE|LARGE ribosomal subunit protein uL16|Aeropyrum pernix (strain ATCC 700893

Query: 3 GDEDGIKE 10
GDE+ +KE
Sbjct: 142 GDEENVKE 149


>sp|PURQ_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FHGDEDGIK 9
F G EDG+K
Sbjct: 204 FLGSEDGLK 212


>sp|PURQ_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermococcus kodakarensis (strain ATCC

Query: 1 FHGDEDGIK 9
F G EDG+K
Sbjct: 204 FLGSEDGLK 212


>sp|PURQ_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FHGDEDGIK 9
F G EDG+K
Sbjct: 204 FLGSEDGLK 212


>sp|PURQ_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus abyssi (strain GE5 /

Query: 1 FHGDEDGIK 9
F G EDG+K
Sbjct: 204 FLGSEDGLK 212


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 1 FHGDEDGIKE 10
+ GDE+ +KE
Sbjct: 102 YKGDEEALKE 111


>sp|TRUA_THEON|TRNA pseudouridine synthase A|Thermococcus onnurineus (strain NA1)

Query: 1 FHGDEDGIKE 10
F G+E GI++
Sbjct: 232 FRGNEKGIRK 241


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FHGDEDGI 8
HGDE G+
Sbjct: 279 IHGDESGL 286


>sp|ENO_METVS|ENOLASE vannielii (strain ATCC 35089

Query: 1 FHGDEDGIKE 10
F GD +G KE
Sbjct: 291 FEGDFEGFKE 300


>sp|FLPA_HALSA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halobacterium salinarum (strain

Query: 3 GDEDGI 8
GDEDG+
Sbjct: 13 GDEDGV 18


>sp|FLPA_HALS3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halobacterium salinarum (strain

Query: 3 GDEDGI 8
GDEDG+
Sbjct: 13 GDEDGV 18


>sp|RIFK_METHJ|RIBOFLAVIN kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HGDEDGIKE 10
HG ED +++
Sbjct: 69 HGGEDALRQ 77


>sp|ACYP_PICTO|ACYLPHOSPHATASE torridus (strain ATCC 700027

Query: 1 FHGDEDGIKE 10
F GDE+ IK
Sbjct: 42 FQGDEEKIKR 51


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FHGDEDGIK 9
F GD DGI+
Sbjct: 30 FEGDIDGIE 38


>sp|PCNA_METM6|DNA polymerase sliding clamp|Methanococcus maripaludis (strain C6 /

Query: 1 FHGDEDGIK 9
F DE+GIK
Sbjct: 27 FEVDENGIK 35


>sp|OGT_METAC|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GDEDGIK 9
GDE+G+K
Sbjct: 17 GDEEGLK 23


>sp|PCNA_METJA|DNA polymerase sliding clamp|Methanocaldococcus jannaschii (strain

Query: 1 FHGDEDGIK 9
F DE+GIK
Sbjct: 28 FEVDEEGIK 36


>sp|FTR_METKA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 HGDEDGIKE 10
H DED +KE
Sbjct: 79 HNDEDELKE 87


>sp|RNP3_METM7|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C7 /

Query: 4 DEDGIK 9
DEDGIK
Sbjct: 13 DEDGIK 18


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FHGDEDGI 8
+HGD DG+
Sbjct: 23 WHGDLDGL 30




79|SequenceR|400|391|ERHAPFHGDE

>sp|METE_THEAC|METHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ERHAPFHGDE 10
ER PFH DE
Sbjct: 100 ERREPFHVDE 109


>sp|PIMT_PYRIL|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ERHAPF 6
ERHAPF
Sbjct: 138 ERHAPF 143


>sp|PIMT_PYRCJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ERHAPF 6
ERHAPF
Sbjct: 138 ERHAPF 143


>sp|RS17_THEVO|SMALL ribosomal subunit protein uS17|Thermoplasma volcanium (strain

Query: 3 HAPFHGD 9
H PFHG+
Sbjct: 21 HCPFHGN 27


>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 3 HAPFHGD 9
H P HGD
Sbjct: 155 HIPLHGD 161


>sp|SRP54_METJA|SIGNAL recognition particle 54 kDa|Methanocaldococcus jannaschii (strain

Query: 3 HAPFHGDE 10
H P +GDE
Sbjct: 155 HVPIYGDE 162


>sp|PIMT_PYRNV|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ERHAPF 6
ERHAPF
Sbjct: 138 ERHAPF 143


>sp|PIMT_PYRAE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ERHAPF 6
E+HAPF
Sbjct: 138 EKHAPF 143


>sp|Y1298_METVS|UPF0248 protein Mevan_1298|Methanococcus vannielii (strain ATCC 35089

Query: 1 ERHAPFH 7
E H PFH
Sbjct: 52 ETHIPFH 58


>sp|RS17_NITMS|SMALL ribosomal subunit protein uS17|Nitrosopumilus maritimus (strain

Query: 1 ERHAPFHGD 9
+++ PFHG+
Sbjct: 18 DKNCPFHGE 26


>sp|RS17_THEAC|SMALL ribosomal subunit protein uS17|Thermoplasma acidophilum (strain

Query: 3 HAPFHG 8
H P+HG
Sbjct: 21 HCPYHG 26


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RHAPFHGD 9
+H+P H D
Sbjct: 341 QHSPLHAD 348


>sp|RS17_METTH|SMALL ribosomal subunit protein uS17|Methanothermobacter

Query: 3 HAPFHGD 9
+ PFHGD
Sbjct: 17 NCPFHGD 23


>sp|RS17_METJA|SMALL ribosomal subunit protein uS17|Methanocaldococcus jannaschii

Query: 1 ERHAPFHGD 9
+++ PFHG+
Sbjct: 19 DKNCPFHGN 27


>sp|RS17_METBF|SMALL ribosomal subunit protein uS17|Methanosarcina barkeri (strain

Query: 1 ERHAPFHG 8
+ + PFHG
Sbjct: 18 DSYCPFHG 25


>sp|Y1289_METM7|UPF0248 protein MmarC7_1289|Methanococcus maripaludis (strain C7 /

Query: 1 ERHAPFH 7
E H PFH
Sbjct: 52 ETHVPFH 58


>sp|Y160_METLZ|PUTATIVE HTH-type transcriptional regulatory protein|Methanocorpusculum

Query: 2 RHAPFHG 8
R APFH
Sbjct: 233 RRAPFHA 239


>sp|RS17_METMA|SMALL ribosomal subunit protein uS17|Methanosarcina mazei (strain ATCC

Query: 1 ERHAPFHG 8
+ + PFHG
Sbjct: 18 DAYCPFHG 25


>sp|RS17_METAC|SMALL ribosomal subunit protein uS17A|Methanosarcina acetivorans

Query: 1 ERHAPFHG 8
+ + PFHG
Sbjct: 18 DAYCPFHG 25


>sp|RS17_HALMA|SMALL ribosomal subunit protein uS17|Haloarcula marismortui (strain

Query: 1 ERHAPFHGD 9
+++ PFHG+
Sbjct: 16 DQNCPFHGE 24


>sp|Y1387_METM5|UPF0248 protein MmarC5_1387|Methanococcus maripaludis (strain C5 /

Query: 1 ERHAPFH 7
E H PFH
Sbjct: 52 ETHIPFH 58


>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter thermautotrophicus

Query: 2 RHAPFH 7
RHAP H
Sbjct: 244 RHAPCH 249


>sp|Y286_METMP|UPF0248 protein MMP0286|Methanococcus maripaludis (strain DSM 14266

Query: 1 ERHAPFH 7
E H PFH
Sbjct: 52 ETHIPFH 58




80|SequenceR|405|396|MSLMVERHAP

>sp|PIMT_PYRIL|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 VERHAP 10
+ERHAP
Sbjct: 137 LERHAP 142


>sp|PIMT_PYRCJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 VERHAP 10
+ERHAP
Sbjct: 137 LERHAP 142




81|SequenceR|410|401|SSHMLMSLMV

***** No hits found ******


82|SequenceR|415|406|FVEKSSSHML

***** No hits found ******


83|SequenceR|420|411|NASAQFVEKS

***** No hits found ******


84|SequenceR|425|416|LTSLANASAQ

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 LTSLANASA 9
LTSL NA+A
Sbjct: 4999 LTSLENATA 5007


Query: 1 LTSLANASA 9
LTSL NA+A
Sbjct: 5423 LTSLENATA 5431




85|SequenceR|430|421|VNQELLTSLA

>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 NQELLTS 8
N+ELLTS
Sbjct: 285 NEELLTS 291




86|SequenceR|435|426|IKRFNVNQEL

>sp|CDPAS_METMP|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KRFNVNQ 8
+RFN+NQ
Sbjct: 113 RRFNLNQ 119


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 IKRFNVNQ 8
I+ FN+NQ
Sbjct: 331 IQSFNINQ 338


>sp|NCPP_CALMQ|PROBABLE inosine/xanthosine triphosphatase|Caldivirga maquilingensis (strain

Query: 1 IKRFNVNQE 9
IKR N+N E
Sbjct: 152 IKRINLNTE 160


>sp|NK_METJA|NUCLEOSIDE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKRFNVNQEL 10
IK+ VN EL
Sbjct: 52 IKKLGVNSEL 61




87|SequenceR|440|431|GKSLLIKRFN

>sp|ECFA_METMJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanoculleus marisnigri

Query: 1 GKSLLIKRFN 10
GKS L K FN
Sbjct: 42 GKSTLFKHFN 51


>sp|Y1038_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GKSLLIKRFN 10
GKS LIK FN
Sbjct: 45 GKSTLIKLFN 54


>sp|Y4342_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GKSLLIKRFN 10
GKS LIK FN
Sbjct: 45 GKSTLIKLFN 54


>sp|ECFA1_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 1 GKSLLIKRFN 10
GKS L K FN
Sbjct: 42 GKSTLFKHFN 51


>sp|CAS1_NANEQ|CRISPR-ASSOCIATED endonuclease Cas1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GKSLLIKRFN 10
GK L+IK FN
Sbjct: 279 GKKLVIKEFN 288


>sp|Y1631_HALSA|PUTATIVE ABC transporter ATP-binding protein|Halobacterium salinarum

Query: 1 GKSLLIKRFN 10
GKS L++ FN
Sbjct: 39 GKSTLLRHFN 48


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GKSLLIKRFN 10
GK+ L+K FN
Sbjct: 299 GKTTLVKHFN 308


>sp|Y423_METJA|UNCHARACTERIZED ATP-binding protein MJ0423|Methanocaldococcus jannaschii (strain

Query: 1 GKSLLIKRF 9
GK++LIK+F
Sbjct: 38 GKTMLIKKF 46


>sp|PSTB_PYRFU|PHOSPHATE import ATP-binding protein PstB|Pyrococcus furiosus (strain ATCC

Query: 1 GKSLLIKRFN 10
GKS L++ FN
Sbjct: 42 GKSTLLRTFN 51


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 GKSLLIKRF 9
GK++L KRF
Sbjct: 141 GKTVLKKRF 149


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 2 KSLLIKRFN 10
K LLI++FN
Sbjct: 179 KELLIRKFN 187


>sp|RPIA_KORCO|RIBOSE-5-PHOSPHATE isomerase A|Korarchaeum cryptofilum (strain OPF8)

Query: 5 LIKRFN 10
LIKRFN
Sbjct: 147 LIKRFN 152


>sp|PSTB_PYRAB|PHOSPHATE import ATP-binding protein PstB|Pyrococcus abyssi (strain GE5 /

Query: 1 GKSLLIKRFN 10
GKS L++ FN
Sbjct: 43 GKSTLLRAFN 52


>sp|Y068_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 1 GKSLLIKRFN 10
GK+ L+K FN
Sbjct: 39 GKTTLVKMFN 48


>sp|RL37_METVS|LARGE ribosomal subunit protein eL37|Methanococcus vannielii (strain

Query: 1 GKSLLIKRF 9
GKS IKRF
Sbjct: 41 GKSTKIKRF 49


>sp|PSTB_THEKO|PHOSPHATE import ATP-binding protein PstB|Thermococcus kodakarensis (strain

Query: 1 GKSLLIKRFN 10
GKS +++ FN
Sbjct: 42 GKSTMLRTFN 51


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 GKSLLIK 7
GKSLL+K
Sbjct: 518 GKSLLVK 524


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 GKSLLIK 7
GKSLL+K
Sbjct: 508 GKSLLVK 514


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 GKSLLIKRFN 10
G+ +IKRF+
Sbjct: 488 GREYIIKRFS 497


>sp|SYD_THEVO|ASPARTATE--TRNA(ASP) ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 SLLIKRFN 10
LL+KRFN
Sbjct: 363 DLLLKRFN 370


>sp|Y1110_METJA|UNCHARACTERIZED protein MJ1110|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKSLLIKRFN 10
K +LIKRF+
Sbjct: 338 SKDILIKRFS 347


>sp|RL37_METM6|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 1 GKSLLIKRF 9
GKS IKRF
Sbjct: 41 GKSSKIKRF 49


>sp|RL37_METM7|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 1 GKSLLIKRF 9
GKS IKRF
Sbjct: 41 GKSSKIKRF 49


>sp|RL37_METM5|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 1 GKSLLIKRF 9
GKS IKRF
Sbjct: 41 GKSSKIKRF 49


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GKSLLIKRFN 10
GKS L+K N
Sbjct: 49 GKSTLLKTLN 58


>sp|Y870_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GKSLLIKRFN 10
GKS L+K N
Sbjct: 49 GKSTLLKTLN 58




88|SequenceR|445|436|VNLHIGKSLL

>sp|RS15_NANEQ|SMALL ribosomal subunit protein uS15|Nanoarchaeum equitans (strain

Query: 1 VNLHIGKSL 9
V L+IGKSL
Sbjct: 65 VRLYIGKSL 73


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNLHIGKSL 9
VNL+IG SL
Sbjct: 178 VNLYIGYSL 186


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 4 HIGKSLL 10
H+GKS+L
Sbjct: 13 HVGKSIL 19


>sp|RS4E_METS3|SMALL ribosomal subunit protein eS4|Methanobrevibacter smithii (strain

Query: 1 VNLHIGKSLL 10
VNLH GK+++
Sbjct: 138 VNLHDGKNVI 147


>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NLHIGKSL 9
NL+IGK+L
Sbjct: 44 NLYIGKNL 51


>sp|RS4E_AERPE|SMALL ribosomal subunit protein eS4|Aeropyrum pernix (strain ATCC 700893

Query: 1 VNLHIGKSLL 10
+NLH G+++L
Sbjct: 140 LNLHDGRNIL 149


>sp|RS4E_IGNH4|SMALL ribosomal subunit protein eS4|Ignicoccus hospitalis (strain KIN4/I

Query: 1 VNLHIGKSLL 10
+NLH G+++L
Sbjct: 141 LNLHDGRNVL 150




89|SequenceR|450|441|QMLELVNLHI

>sp|MOAA_METAR|PROBABLE GTP 3',8-cyclase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QMLELVNLH 9
Q++EL+N H
Sbjct: 180 QIIELMNFH 188


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QMLELVNLHI 10
+MLE++NL I
Sbjct: 594 RMLEILNLRI 603


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 4 ELVNLHI 10
ELV+LHI
Sbjct: 382 ELVDLHI 388




90|SequenceR|455|446|SHIHKQMLEL

>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SHIHKQMLE 9
+H+H +MLE
Sbjct: 19 AHVHPKMLE 27


>sp|MRE11_METJA|DNA double-strand break repair protein|Methanocaldococcus jannaschii

Query: 2 HIHKQMLE 9
HIHK++LE
Sbjct: 186 HIHKRILE 193


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HIHKQMLEL 10
H+H M+EL
Sbjct: 217 HVHSVMIEL 225


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 2 HIHKQMLEL 10
H+H M+EL
Sbjct: 217 HVHSVMVEL 225


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HIHKQMLEL 10
H+H M+EL
Sbjct: 217 HVHSVMVEL 225


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 2 HIHKQMLEL 10
H+H M+EL
Sbjct: 217 HVHSVMVEL 225


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 2 HIHKQMLEL 10
H+H M+EL
Sbjct: 217 HVHSIMVEL 225


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 2 HIHKQMLEL 10
H+H M+EL
Sbjct: 217 HVHSIMVEL 225


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HIHKQMLEL 10
H+H M+EL
Sbjct: 217 HVHSIMVEL 225


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SHIHKQMLEL 10
+H+ K+ML+L
Sbjct: 326 NHVLKEMLKL 335




91|SequenceR|460|451|EAVEPSHIHK

>sp|Y738_ARCFU|UPF0058 protein AF_0738|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AVEPSHIHK 10
V+P HIHK
Sbjct: 37 GVQPVHIHK 45


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 EAVEPSHIH 9
E EP H+H
Sbjct: 282 EIFEPRHVH 290


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EAVEPSHIHK 10
E VEP IH+
Sbjct: 225 ERVEPGMIHR 234


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 1 EAVEPSHI 8
EA+EP H+
Sbjct: 124 EALEPKHV 131


>sp|SYFA_METHJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EAVEPSHI 8
EA++P+H+
Sbjct: 345 EAIDPTHL 352


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EAVEPSHIHK 10
E EPSH+++
Sbjct: 182 EITEPSHVYE 191


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 EAVEPSHIH 9
E V+PS IH
Sbjct: 317 EEVKPSFIH 325


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EAVEPSHI 8
EA++P+H+
Sbjct: 349 EAIDPTHL 356


>sp|THPR_ARCFU|RNA 2',3'-cyclic phosphodiesterase|Archaeoglobus fulgidus (strain

Query: 1 EAVEPSHIH 9
+AVEP ++H
Sbjct: 31 KAVEPENLH 39




92|SequenceR|465|456|MKCGSEAVEP

>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KCGSEAVE 9
KCGSE V+
Sbjct: 600 KCGSENVD 607


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MKCGSEAV 8
MKCGS+++
Sbjct: 1019 MKCGSDSL 1026


>sp|RS5_METJA|SMALL ribosomal subunit protein uS5|Methanocaldococcus jannaschii (strain

Query: 2 KCGSEAVE 9
KCGS A+E
Sbjct: 136 KCGSTAIE 143


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 MKCGSEAVEP 10
+ CG +AV+P
Sbjct: 346 ITCGGQAVKP 355


>sp|RS27_HYPBU|SMALL ribosomal subunit protein eS27|Hyperthermus butylicus (strain DSM

Query: 1 MKCGSEAVEP 10
+ CG++ VEP
Sbjct: 41 LVCGAQLVEP 50


>sp|PANB_CALMQ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 MKCGSEAVEP 10
++ G+EAV+P
Sbjct: 106 IRAGAEAVKP 115


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KCGSEAVE 9
+CG+EAV+
Sbjct: 145 QCGAEAVK 152


>sp|PYRE_PYRAR|OROTATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KCGSEAV 8
+CG+EAV
Sbjct: 145 QCGAEAV 151


>sp|PANB_PYRCJ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 MKCGSEAVEP 10
++ G+EAV+P
Sbjct: 106 VRAGAEAVKP 115


>sp|CREN7_IGNH4|CHROMATIN protein Cren7|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KCGSEAVEP 10
KCG+E EP
Sbjct: 6 KCGAEVKEP 14


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 2 KCGSEAVEP 10
K G+EA+ P
Sbjct: 72 KAGAEAIHP 80


>sp|NPD2_ARCFU|NAD-DEPENDENT protein deacylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KCGSEAVEP 10
KCGS V+P
Sbjct: 152 KCGSYYVKP 160


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 3 CGSEAVEP 10
CG E V+P
Sbjct: 230 CGMENVDP 237


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 3 CGSEAVEP 10
CG E V+P
Sbjct: 230 CGMENVDP 237


>sp|Y2715_METAR|UPF0251 protein UNCMA_27150|Methanocella arvoryzae (strain DSM 22066

Query: 2 KCGSEAV 8
KCGSE++
Sbjct: 126 KCGSESI 132


>sp|Y397_ARCFU|UNCHARACTERIZED protein AF_0397|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MKCGSEA 7
+KCGSE
Sbjct: 109 LKCGSEG 115


>sp|RL37A_HALSA|LARGE ribosomal subunit protein eL43|Halobacterium salinarum (strain

Query: 3 CGSEAV 8
CGSEAV
Sbjct: 41 CGSEAV 46


>sp|RL37A_HALS3|LARGE ribosomal subunit protein eL43|Halobacterium salinarum (strain

Query: 3 CGSEAV 8
CGSEAV
Sbjct: 41 CGSEAV 46


>sp|NOB1_ARCFU|ENDORIBONUCLEASE Nob1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CGSEAV 8
CGSEA+
Sbjct: 148 CGSEAI 153




93|SequenceR|470|461|FLHNLMKCGS

>sp|PYRK_ARCFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Archaeoglobus fulgidus

Query: 5 LMKCGS 10
LMKCGS
Sbjct: 109 LMKCGS 114


>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LHNLMKCGS 10
+H L+ CGS
Sbjct: 38 VHGLLACGS 46


>sp|DNAG_METLZ|DNA primase DnaG|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 NLMKCG 9
NL+KCG
Sbjct: 184 NLLKCG 189


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 2 LHNLMKCG 9
LH+LMK G
Sbjct: 242 LHDLMKFG 249


>sp|UDGA_SACS2|TYPE-4 uracil-DNA glycosylase|Saccharolobus solfataricus (strain ATCC

Query: 1 FLHNLMKC 8
F+ NL+KC
Sbjct: 79 FITNLVKC 86


>sp|PYRK_METMA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina mazei

Query: 2 LHNLMKCG 9
LH KCG
Sbjct: 205 LHRYFKCG 212


>sp|PYRK_METAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina acetivorans

Query: 2 LHNLMKCG 9
LH KCG
Sbjct: 205 LHRYFKCG 212


>sp|HMD_METJA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LHNLMK 7
+HNLMK
Sbjct: 293 IHNLMK 298


>sp|SUCD_METS5|SUCCINATE-SEMIALDEHYDE dehydrogenase (acetylating)|Metallosphaera sedula (strain ATCC

Query: 1 FLHNLMKCGS 10
F+H KCG+
Sbjct: 85 FIHPCGKCGN 94


>sp|AROD_METS5|3-DEHYDROQUINATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 FLHNLMKCG 9
FL+ LMK G
Sbjct: 75 FLNELMKLG 83




94|SequenceR|475|466|TNSGEFLHNL

>sp|G1PDH_NITMS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Nitrosopumilus maritimus (strain SCM1)

Query: 4 GEFLHNL 10
GEFLHNL
Sbjct: 30 GEFLHNL 36


>sp|RNZ_PYRFU|RIBONUCLEASE Z|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NSGEFLHNL 10
NSGEF+ N
Sbjct: 93 NSGEFISNF 101


>sp|Y224_METJA|UNCHARACTERIZED protein MJ0224|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NSGEFLHNL 10
NSGE+L L
Sbjct: 63 NSGEYLEKL 71


>sp|ARLY_PYRNV|ARGININOSUCCINATE lyase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 SGEFLHNL 10
+GEFLH L
Sbjct: 170 AGEFLHVL 177


>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 3 SGEFLH 8
SGEF+H
Sbjct: 312 SGEFMH 317


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 1 TNSGEFLHNL 10
TN EF++NL
Sbjct: 192 TNDPEFMNNL 201


>sp|SYS_HALLT|SERINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 SGEFLHNL 10
S EFLH L
Sbjct: 394 SAEFLHTL 401


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 2 NSGEFLHN 9
++GEFLH+
Sbjct: 232 HAGEFLHH 239


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TNSGEFL 7
TNSGEF+
Sbjct: 55 TNSGEFI 61


>sp|Y1942_ARCFU|UNCHARACTERIZED protein AF_1942|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TNSGEFLHNL 10
T GEF HN
Sbjct: 108 TAKGEFCHNF 117


>sp|ARGDC_SULTO|ARGININE decarboxylase proenzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NSGEFLHNL 10
N +FLHNL
Sbjct: 32 NDKDFLHNL 40


>sp|DPO4_PICTO|DNA polymerase IV|Picrophilus torridus (strain ATCC 700027

Query: 3 SGEFLHNL 10
+GEFL+N+
Sbjct: 167 TGEFLNNI 174


>sp|PUR8_METJA|ADENYLOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NSGEFLH 8
N+GE++H
Sbjct: 104 NAGEYIH 110


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 4 GEFLHN 9
GEFLH+
Sbjct: 234 GEFLHH 239




95|SequenceR|480|471|MIDLSTNSGE

>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 MIDLSTNSG 9
M DL TN G
Sbjct: 692 MFDLVTNEG 700


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MIDLSTNSG 9
M DL TN G
Sbjct: 690 MFDLVTNEG 698


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DLSTNSGE 10
+++TNSGE
Sbjct: 52 EIATNSGE 59


>sp|NTPTH_SACS2|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MIDLSTNSGE 10
++D++TN G+
Sbjct: 58 IVDITTNEGD 67


>sp|Y1942_ARCFU|UNCHARACTERIZED protein AF_1942|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DLSTNSG 9
DLS+NSG
Sbjct: 69 DLSSNSG 75


>sp|Y708_METMA|UPF0284 protein MM_0708|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IDLSTNSGE 10
IDL N GE
Sbjct: 106 IDLKANPGE 114




96|SequenceR|485|476|PVVAAMIDLS

>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PVVAAMIDLS 10
P++A M DLS
Sbjct: 379 PIIAKMPDLS 388


>sp|OTC_META3|ORNITHINE carbamoyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PVVAAMIDLS 10
PV+ A+ DLS
Sbjct: 115 PVINALSDLS 124


>sp|OTC_METVS|ORNITHINE carbamoyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PVVAAMIDLS 10
PV+ A+ DLS
Sbjct: 115 PVINALSDLS 124


>sp|MVK_THEON|MEVALONATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 PVVAAMIDL 9
P +AA IDL
Sbjct: 24 PAIAAAIDL 32


>sp|MVK_THEKO|MEVALONATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PVVAAMIDL 9
P +AA IDL
Sbjct: 27 PAIAAAIDL 35




97|SequenceR|490|481|VTLIKPVVAA

***** No hits found ******


98|SequenceR|495|486|EHRKMVTLIK

>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 2 HRKMVTLIK 10
H K++TLI+
Sbjct: 303 HNKVITLIR 311




99|SequenceR|500|491|VPLSTEHRKM

>sp|RIFK_METTH|RIBOFLAVIN kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PLSTEHRK 9
PL T HR+
Sbjct: 81 PLKTHHRQ 88


>sp|IORB_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus horikoshii (strain ATCC

Query: 2 PLSTEHRK 9
PLS EH K
Sbjct: 163 PLSAEHVK 170


>sp|IORB_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus abyssi (strain GE5 /

Query: 2 PLSTEHRK 9
PLS EH K
Sbjct: 163 PLSAEHVK 170


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VPLSTEHRKM 10
+PL+ E +KM
Sbjct: 112 IPLTEERKKM 121


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VPLSTEHRKM 10
+PL+ E +KM
Sbjct: 112 IPLTEERKKM 121


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VPLSTEHRKM 10
+PL+ E +KM
Sbjct: 112 IPLTEERKKM 121


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VPLSTEHRKM 10
+PL+ E +KM
Sbjct: 112 IPLTEERKKM 121


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VPLSTEHRKM 10
+PL+ E +KM
Sbjct: 112 IPLTEERKKM 121


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VPLSTEHRKM 10
+PL+ E +KM
Sbjct: 112 IPLTEERKKM 121


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 3 LSTEHRKM 10
L TE+RKM
Sbjct: 5 LDTENRKM 12


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 3 LSTEHRKM 10
L TE+RKM
Sbjct: 5 LDTENRKM 12


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PLSTEH 7
PL+TEH
Sbjct: 408 PLTTEH 413


>sp|HIS2_METMA|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PLSTEHRKM 10
LST H KM
Sbjct: 93 ELSTRHEKM 101




100|SequenceR|505|496|LAELQVPLST

>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LAELQVPLS 9
L+EL+VPL+
Sbjct: 99 LSELEVPLA 107


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LAELQVPLST 10
LAE +P+ST
Sbjct: 337 LAEKNIPVST 346




101|SequenceR|510|501|HLIARLAELQ

***** No hits found ******


102|SequenceR|515|506|GPVIFHLIAR

>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 1 GPVIFHLIA 9
GPV+ HL+A
Sbjct: 20 GPVVTHLVA 28


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GPVIFHLI 8
GPVI H+I
Sbjct: 561 GPVIVHVI 568


>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPVIFHLIA 9
GPV+FH ++
Sbjct: 38 GPVLFHNVS 46


>sp|PSB2_NITMS|PROTEASOME subunit beta 2|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GPVIFHLIAR 10
GP+ H +AR
Sbjct: 84 GPISIHSLAR 93




103|SequenceR|520|511|SEEPMGPVIF

>sp|Y1985_PYRAR|UPF0201 protein Pars_1985|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SEEPMGPVIF 10
+E P+GP+ F
Sbjct: 103 NESPLGPITF 112


>sp|Y1658_PYRIL|UPF0201 protein Pisl_1658|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SEEPMGPVIF 10
+E P+GP+ F
Sbjct: 103 NESPLGPITF 112


>sp|Y685_PYRNV|UPF0201 protein Tneu_0685|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 EEPMGPVIF 10
E P+GP+ F
Sbjct: 104 ESPLGPITF 112


>sp|Y1632_PYRAE|UPF0201 protein PAE1632|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EEPMGPVIF 10
E P+GP+ F
Sbjct: 104 ESPLGPITF 112


>sp|Y593_PYRCJ|UPF0201 protein Pcal_0593|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EEPMGPVIF 10
E P+GP+ F
Sbjct: 104 ESPLGPITF 112


>sp|Y1787_METS5|UPF0201 protein Msed_1787|Metallosphaera sedula (strain ATCC 51363

Query: 1 SEEPMGPVIF 10
+E P+GP+ +
Sbjct: 102 NESPLGPITY 111


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 EEPMGPVI 9
E P+GP+I
Sbjct: 119 ERPLGPLI 126


>sp|RL4_SACS2|LARGE ribosomal subunit protein uL4|Saccharolobus solfataricus (strain

Query: 2 EEPMGPVI 9
+EP+GP+I
Sbjct: 198 KEPIGPLI 205


>sp|RL4_SACI6|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 2 EEPMGPVI 9
+EP+GP+I
Sbjct: 198 KEPIGPLI 205


>sp|RL4_SACI4|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 2 EEPMGPVI 9
+EP+GP+I
Sbjct: 198 KEPIGPLI 205


>sp|RL4_SACI3|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 2 EEPMGPVI 9
+EP+GP+I
Sbjct: 198 KEPIGPLI 205


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EEPMGP 7
EEP GP
Sbjct: 305 EEPFGP 310


>sp|OGT_METBF|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EEPMGPVIF 10
E P+GP++
Sbjct: 7 ESPIGPILL 15


>sp|BRIX_THEKO|PROBABLE Brix domain-containing ribosomal biogenesis|Thermococcus

Query: 2 EEPMGPVIF 10
E P+GP+I
Sbjct: 176 ERPVGPLIL 184


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 EEPMGPVI 9
PMGP+I
Sbjct: 117 RRPMGPII 124


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EPMGPVIF 10
+P GP++F
Sbjct: 289 DPNGPIVF 296


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 EPMGPVIF 10
+P GP++F
Sbjct: 289 DPNGPIVF 296


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 3 EPMGPVIF 10
+P GP++F
Sbjct: 289 DPNGPIVF 296


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 3 EPMGPVIF 10
+P GP++F
Sbjct: 289 DPNGPIVF 296


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 EPMGPVIF 10
+P GP++F
Sbjct: 289 DPNGPIVF 296


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 EPMGPVIF 10
+P GP++F
Sbjct: 289 DPNGPIVF 296


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 EPMGPVIF 10
+P GP++F
Sbjct: 289 DPNGPIVF 296


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 EEPMGPVIF 10
++P GP+++
Sbjct: 36 QQPKGPIVY 44


>sp|Y399_METKA|UPF0201 protein MK0399|Methanopyrus kandleri (strain AV19 /

Query: 2 EEPMGPVI 9
E P+GP++
Sbjct: 110 ESPLGPIV 117




104|SequenceR|525|516|ETDERSEEPM

>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DERSEEPM 10
DER E+PM
Sbjct: 207 DERFEDPM 214


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 ETDERSEEPM 10
+TD R++ PM
Sbjct: 143 DTDPRTKRPM 152


>sp|DNAG_METAR|DNA primase DnaG|Methanocella arvoryzae (strain DSM 22066

Query: 1 ETDERSEEP 9
E+ ERSE+P
Sbjct: 321 ESRERSEQP 329


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 DERSEEPM 10
DE++E+PM
Sbjct: 464 DEKAEKPM 471




105|SequenceR|530|521|LKHHFETDER

>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 1 LKHHFETDER 10
L HHF+TD+R
Sbjct: 381 LIHHFKTDDR 390


>sp|Y136_METHJ|UPF0280 protein Mhun_0136|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LKHHFETDE 9
L+HHFE E
Sbjct: 3 LRHHFELRE 11


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 LKHHFETDE 9
L HH++TDE
Sbjct: 390 LIHHYKTDE 398


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LKHHFETDER 10
LK H E D+R
Sbjct: 54 LKKHVEIDKR 63


>sp|GGR1_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 LKHHFETDER 10
L+ H E DE+
Sbjct: 54 LRQHIELDEK 63


>sp|VHUA_METJA|F420-NON-REDUCING hydrogenase vhu subunit A|Methanocaldococcus jannaschii (strain

Query: 1 LKHHFETDE 9
L H++ETDE
Sbjct: 377 LIHNYETDE 385


>sp|GCSH1_SULAC|PROBABLE glycine cleavage system H|Sulfolobus acidocaldarius (strain ATCC

Query: 2 KHHFETDE 9
+H+ ETDE
Sbjct: 15 RHYTETDE 22


>sp|FOLD_PYRAR|BIFUNCTIONAL protein FolD|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KHHFETDER 10
K HF+ DE+
Sbjct: 256 KWHFDVDEK 264


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 1 LKHHFETDE 9
L HH+ DE
Sbjct: 378 LTHHYTCDE 386


>sp|GYAR_THEKO|GLYOXYLATE reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LKHHFETD 8
LK HFE +
Sbjct: 19 LKEHFEVE 26


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 HHFETDER 10
H F TDE+
Sbjct: 148 HAFNTDEK 155


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 LKHHFETDE 9
+++HF+TD+
Sbjct: 215 VQYHFKTDQ 223


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 1 LKHHFETDE 9
L H++ETD+
Sbjct: 377 LFHNYETDD 385


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 4 HFETD 8
HFETD
Sbjct: 238 HFETD 242




106|SequenceR|535|526|KKVMNLKHHF

>sp|Y1080_METJA|UNCHARACTERIZED protein MJ1080|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KVMNLKH 8
K+MN+KH
Sbjct: 4 KIMNIKH 10


>sp|RS15_METM7|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain C7

Query: 1 KKVMNLKHHF 10
KK +NL++H
Sbjct: 93 KKAINLRNHL 102


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KKVMNLKHH 9
+K+MN+K H
Sbjct: 397 EKIMNVKIH 405


>sp|RS15_METMP|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain

Query: 1 KKVMNLKHHF 10
KK +NL++H
Sbjct: 93 KKAINLRNHL 102


>sp|RS15_METM5|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain C5

Query: 1 KKVMNLKHHF 10
KK +NL++H
Sbjct: 93 KKAINLRNHL 102


>sp|RS15_METVS|SMALL ribosomal subunit protein uS15|Methanococcus vannielii (strain ATCC

Query: 1 KKVMNLKHHF 10
KK +NL++H
Sbjct: 93 KKAINLRNHL 102


>sp|RS15_META3|SMALL ribosomal subunit protein uS15|Methanococcus aeolicus (strain ATCC

Query: 1 KKVMNLKHHF 10
KK +NL++H
Sbjct: 93 KKAINLRNHL 102


>sp|Y3410_METJA|UNCHARACTERIZED protein MJECS10|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KVMNLKHHF 10
K++NLKH +
Sbjct: 81 KILNLKHLY 89




107|SequenceR|540|531|NKFCQKKVMN

>sp|CAS7_THETK|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Thermoproteus tenax (strain ATCC 35583

Query: 1 NKFCQKKV 8
N+FC+K V
Sbjct: 76 NEFCKKGV 83


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NKFCQKKVMN 10
N +C K V+N
Sbjct: 260 NSYCPKGVVN 269


>sp|Y1642_METJA|UNCHARACTERIZED protein MJ1642|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKFCQKKV 8
NKFCQ +V
Sbjct: 124 NKFCQFEV 131




108|SequenceR|545|536|LKHIDNKFCQ

>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KHIDNKF 8
KHIDNK+
Sbjct: 30 KHIDNKY 36


>sp|Y3516_METJA|UNCHARACTERIZED protein MJECL16|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKHIDNKFCQ 10
L+++DNKF Q
Sbjct: 32 LRYVDNKFNQ 41


>sp|AMZA_HALMA|ARCHAEMETZINCIN marismortui (strain ATCC 43049

Query: 1 LKHIDNKFC 9
L+H DNK C
Sbjct: 138 LEHCDNKRC 146


>sp|Y1074_METJA|UNCHARACTERIZED protein MJ1074|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKHIDNKFCQ 10
L+++DN+F Q
Sbjct: 73 LRYVDNRFNQ 82


>sp|Y529_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0529|Methanocaldococcus

Query: 2 KHIDNKFCQ 10
KH+DNK+ +
Sbjct: 175 KHLDNKYVE 183


>sp|Y1072_METJA|UNCHARACTERIZED protein MJ1072|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKHIDNKFCQ 10
L+++DN+F Q
Sbjct: 73 LRYVDNRFNQ 82


>sp|FOLD_METPE|BIFUNCTIONAL protein FolD|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LKHIDNKFC 9
+ H+D K C
Sbjct: 225 INHVDGKLC 233


>sp|PORC_METJA|PYRUVATE synthase subunit PorC|Methanocaldococcus jannaschii (strain ATCC

Query: 5 DNKFCQ 10
D KFCQ
Sbjct: 28 DGKFCQ 33


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KHIDNKF 8
KHI++KF
Sbjct: 148 KHIEHKF 154


>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 4 IDNKFC 9
+DN FC
Sbjct: 315 VDNNFC 320


>sp|RNP4_METKA|RIBONUCLEASE P protein component 4|Methanopyrus kandleri (strain AV19 /

Query: 2 KHIDNKFCQ 10
KH+ FC+
Sbjct: 60 KHLKRSFCK 68


>sp|AMZA_NATPD|ARCHAEMETZINCIN pharaonis (strain ATCC 35678

Query: 1 LKHIDNKFC 9
L+H DN C
Sbjct: 138 LEHCDNSRC 146


>sp|AMZA_HALSA|ARCHAEMETZINCIN salinarum (strain ATCC 700922

Query: 1 LKHIDNKFC 9
L+H DN C
Sbjct: 138 LEHCDNNRC 146


>sp|AMZA_HALS3|ARCHAEMETZINCIN salinarum (strain ATCC 29341

Query: 1 LKHIDNKFC 9
L+H DN C
Sbjct: 138 LEHCDNNRC 146


>sp|AMZA_HALWD|ARCHAEMETZINCIN walsbyi (strain DSM 16790

Query: 1 LKHIDNKFC 9
L+H DN C
Sbjct: 138 LEHCDNSKC 146


>sp|Y1107_METJA|UNCHARACTERIZED protein MJ1107|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKHIDNKFCQ 10
L+++DNK Q
Sbjct: 85 LRYVDNKINQ 94




109|SequenceR|550|541|LAALVLKHID

>sp|CBID_METHJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LAALVLKHID 10
L ALVLK+I+
Sbjct: 271 LPALVLKYIN 280


>sp|CBID_METB6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 LAALVLKHID 10
L AL+LK+I+
Sbjct: 270 LPALILKYIE 279




110|SequenceR|555|546|GIFRNLAALV

>sp|HIS8_METMA|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 RNLAALV 10
RNLAALV
Sbjct: 208 RNLAALV 214




111|SequenceR|560|551|QIGPNGIFRN

>sp|CDC6_METLZ|ORC1-TYPE DNA replication protein|Methanocorpusculum labreanum (strain ATCC

Query: 2 IGPNGIFRN 10
I PN IF+N
Sbjct: 16 INPNKIFQN 24


>sp|SYFA_HALSA|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 QIGPNGIFR 9
+IG +GIFR
Sbjct: 441 EIGNSGIFR 449


>sp|SYFA_HALS3|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 QIGPNGIFR 9
+IG +GIFR
Sbjct: 441 EIGNSGIFR 449


>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GPNGIFRN 10
GP G+F N
Sbjct: 332 GPAGVFEN 339


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GPNGIFRN 10
GP G+F N
Sbjct: 332 GPAGVFEN 339


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IGPNGIFRN 10
+GP+G++ +
Sbjct: 351 VGPDGVYED 359


>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 IGPNGI 7
+GPNGI
Sbjct: 379 LGPNGI 384


>sp|ENDA_NATPD|TRNA-SPLICING endonuclease|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QIGPNG 6
++GPNG
Sbjct: 11 EVGPNG 16


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 2 IGPNGIFRN 10
+ P G+F+N
Sbjct: 454 LDPQGVFQN 462


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IGPNGIF 8
+GPNG +
Sbjct: 349 VGPNGAY 355


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 QIGPNGIFR 9
++G +GIFR
Sbjct: 419 ELGGSGIFR 427


>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 2 IGPNGIF 8
+GPNG +
Sbjct: 697 VGPNGTY 703


>sp|Y693_METJA|UNCHARACTERIZED protein MJ0693|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGPNGIF 8
IG NG+F
Sbjct: 165 IGTNGVF 171




112|SequenceR|565|556|KLGCKQIGPN

>sp|SPSS1_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLGCKQIGPN 10
KLG KQ+G N
Sbjct: 287 KLGIKQLGDN 296


>sp|IPYR_AERPE|INORGANIC pyrophosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GCKQIGP 9
GC +IGP
Sbjct: 3 GCLKIGP 9


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 4 CKQIGP 9
CK IGP
Sbjct: 418 CKSIGP 423


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GCKQIG 8
GC+QIG
Sbjct: 9 GCQQIG 14


>sp|PURP_PYRAE|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum aerophilum (strain ATCC

Query: 2 LGCKQIGP 9
+GCK GP
Sbjct: 265 VGCKLAGP 272


>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 1 KLGCKQIGP 9
++GC+ GP
Sbjct: 258 RVGCRLAGP 266


>sp|TRUA_METM6|TRNA pseudouridine synthase A|Methanococcus maripaludis (strain C6 /

Query: 2 LGCKQI 7
LGCK+I
Sbjct: 87 LGCKEI 92


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GCKQIG 8
GCK++G
Sbjct: 188 GCKEVG 193


>sp|KAD6_PYRFU|PUTATIVE adenylate kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLGCKQI 7
KLGCK +
Sbjct: 23 KLGCKYV 29


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KLGCKQI 7
K+GCK++
Sbjct: 66 KIGCKKL 72




113|SequenceR|570|561|ISSIVKLGCK

>sp|PDAD2_ARCFU|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 ISSIVKLGCK 10
+SSIV GC+
Sbjct: 41 VSSIVPPGCR 50




114|SequenceR|575|566|DPFHVISSIV

>sp|HEM1_ARCFU|GLUTAMYL-TRNA reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DPFHVISSI 9
D FHVI SI
Sbjct: 394 DEFHVIESI 402




115|SequenceR|580|571|LMELADPFHV

>sp|SRP54_PYRHO|SIGNAL recognition particle 54 kDa|Pyrococcus horikoshii (strain ATCC

Query: 1 LMELADPFHV 10
L +L DP+H+
Sbjct: 147 LKQLLDPYHI 156


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LMELADPFH 9
L ELAD FH
Sbjct: 564 LKELADNFH 572


>sp|SRP54_PYRAB|SIGNAL recognition particle 54 kDa|Pyrococcus abyssi (strain GE5 /

Query: 1 LMELADPFHV 10
L +L DP+H+
Sbjct: 147 LKQLLDPYHI 156


>sp|ENO_METBU|ENOLASE burtonii (strain DSM 6242

Query: 1 LMELADPFH 9
++ + DPFH
Sbjct: 287 ILSIEDPFH 295


>sp|RADA_AERPX|DNA repair and recombination protein|Aeropyrum pernix

Query: 1 LMELADPFHV 10
LM LAD F+V
Sbjct: 236 LMRLADIFNV 245


>sp|RADA_AERPE|DNA repair and recombination protein|Aeropyrum pernix (strain ATCC

Query: 1 LMELADPFHV 10
LM LAD F+V
Sbjct: 236 LMRLADIFNV 245


>sp|ENO_THEKO|ENOLASE kodakarensis (strain ATCC BAA-918

Query: 1 LMELADPFH 9
++ + DPFH
Sbjct: 284 IVSIEDPFH 292


>sp|ENO_THEGJ|ENOLASE gammatolerans (strain DSM 15229

Query: 1 LMELADPFH 9
++ + DPFH
Sbjct: 284 IVSIEDPFH 292


>sp|ENO_PYRHO|ENOLASE horikoshii (strain ATCC 700860

Query: 1 LMELADPFH 9
++ + DPFH
Sbjct: 282 IVSIEDPFH 290


>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 1 LMELADPFH 9
++ + DPFH
Sbjct: 282 IVSIEDPFH 290


>sp|ENO_METJA|ENOLASE jannaschii (strain ATCC 43067

Query: 1 LMELADPFH 9
++ + DPFH
Sbjct: 281 IVSIEDPFH 289


>sp|ENO_PYRFU|ENOLASE furiosus (strain ATCC 43587

Query: 1 LMELADPFH 9
++ + DPFH
Sbjct: 284 IVSIEDPFH 292


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LMELADPFHV 10
LME+AD F V
Sbjct: 183 LMEIADIFVV 192


>sp|Y133_THEAC|PUTATIVE quercetin 2,3-dioxygenase Ta0133|Thermoplasma acidophilum (strain

Query: 1 LMELADPFHV 10
LM+ DP++V
Sbjct: 144 LMQRIDPYYV 153


>sp|ENO_PYRAE|ENOLASE aerophilum (strain ATCC 51768

Query: 1 LMELADPFH 9
L+ + DPFH
Sbjct: 279 LVYVEDPFH 287


>sp|SPEE1_HYPBU|POLYAMINE aminopropyltransferase 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 LMELADPF 8
+M+L DPF
Sbjct: 161 IMDLTDPF 168


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 2 MELADPFHV 10
ME+ +P HV
Sbjct: 181 MEITEPSHV 189




116|SequenceR|585|576|AGELSLMELA

>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AGELSLM 7
AGELSLM
Sbjct: 373 AGELSLM 379


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 AGELSLMEL 9
AGEL +ME+
Sbjct: 117 AGELDVMEV 125


>sp|RL30_METS3|LARGE ribosomal subunit protein uL30|Methanobrevibacter smithii (strain

Query: 1 AGELSLMEL 9
AGE+ LM+L
Sbjct: 101 AGEVKLMDL 109




117|SequenceR|590|581|LVSDMAGELS

>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 2 VSDMAGEL 9
VS+MAGEL
Sbjct: 82 VSEMAGEL 89


>sp|IF2P_HALLT|PROBABLE translation initiation factor IF-2|Halorubrum lacusprofundi

Query: 2 VSDMAGEL 9
+S+MAGEL
Sbjct: 59 ISEMAGEL 66


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 LVSDMAGEL 9
+++D+AGE+
Sbjct: 291 IIADLAGEI 299




118|SequenceR|595|586|MQLTHLVSDM

>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 MQLTHLVSDM 10
+QLT L+SD+
Sbjct: 20 IQLTSLLSDL 29


>sp|GCH3_PYRCJ|GTP cyclohydrolase III|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 MQLTHLVSDM 10
+Q+ H++SD+
Sbjct: 136 LQILHIISDL 145


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 3 LTHLVSDM 10
+THLV+D+
Sbjct: 23 VTHLVADL 30


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 QLTHLVSD 9
Q HLVSD
Sbjct: 191 QYAHLVSD 198




119|SequenceR|600|591|QDDPYMQLTH

>sp|Y3697_METBF|UPF0280 protein Mbar_A3697|Methanosarcina barkeri (strain Fusaro /

Query: 3 DPYMQLT 9
DPY QLT
Sbjct: 59 DPYFQLT 65


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 DDPYMQL 8
DDPYM L
Sbjct: 145 DDPYMTL 151


>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DDPYMQ 7
DDPY+Q
Sbjct: 62 DDPYLQ 67


>sp|SELD_METJA|SELENIDE, water dikinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DDPYMQ 7
DDPY+Q
Sbjct: 76 DDPYIQ 81


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DDPYMQL 8
DDPYM +
Sbjct: 147 DDPYMTI 153


>sp|Y2648_METMA|UPF0280 protein MM_2648|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DPYMQLT 9
DPY Q+T
Sbjct: 62 DPYFQIT 68


>sp|KTHY_METKA|PROBABLE thymidylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 DDPYMQ 7
DDPY+Q
Sbjct: 51 DDPYLQ 56


>sp|ALDC_METMA|ALPHA-ACETOLACTATE decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QDDPYMQL 8
Q+ PY+QL
Sbjct: 184 QEKPYLQL 191


>sp|Y1715_METAC|UPF0280 protein MA_1715|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DPYMQLT 9
DPY Q T
Sbjct: 59 DPYFQFT 65


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DDPYMQLTH 10
DD Y+ LTH
Sbjct: 282 DDHYLGLTH 290


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DDPYMQLTH 10
DD Y+ LTH
Sbjct: 282 DDHYLGLTH 290


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DDPYMQL 8
+DPYM L
Sbjct: 145 EDPYMTL 151


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 DDPYMQLTH 10
DD Y+ LTH
Sbjct: 283 DDHYLGLTH 291


>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 1 QDDPYMQLTH 10
QDDP + L H
Sbjct: 538 QDDPDVYLLH 547


>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 3 DPYMQLTH 10
DP ++LTH
Sbjct: 46 DPGLRLTH 53


>sp|Y36K_HALSN|UNCHARACTERIZED 36 kDa protein|Halobacterium sp. (strain GN101)

Query: 1 QDDPYMQL 8
+DDPY +L
Sbjct: 314 RDDPYRRL 321




120|SequenceR|605|596|LCQIEQDDPY

>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LCQIEQDDP 9
LC++E +DP
Sbjct: 129 LCKVENNDP 137


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 CQIEQDDP 9
CQI DDP
Sbjct: 392 CQIAGDDP 399


>sp|BAX1_SULTO|ENDONUCLEASE Bax1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LCQIEQDDP 9
LC+ E D P
Sbjct: 71 LCEFELDSP 79


>sp|ATGT_NATPD|TRNA-GUANINE(15) transglycosylase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 QIEQDDP 9
Q+E+DDP
Sbjct: 355 QLERDDP 361


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 LCQIEQDDP 9
+C IE DP
Sbjct: 231 ICSIENFDP 239




121|SequenceR|610|601|ILSLGLCQIE

***** No hits found ******


122|SequenceR|615|606|TILYGILSLG

>sp|Y1317_METJA|UNCHARACTERIZED MFS-type transporter MJ1317|Methanocaldococcus jannaschii (strain

Query: 2 ILYGILSLG 10
I+YGI+SLG
Sbjct: 298 IVYGIVSLG 306


>sp|GLNA_HALVD|GLUTAMINE synthetase|Haloferax volcanii (strain ATCC 29605

Query: 2 ILYGILSLG 10
I+YG+ S+G
Sbjct: 183 IIYGLESMG 191


>sp|GLNA3_HALMT|GLUTAMINE synthetase 3|Haloferax mediterranei (strain ATCC 33500

Query: 2 ILYGILSLG 10
I+YG+ S+G
Sbjct: 183 IIYGLESMG 191


>sp|NIKR_SACI7|PUTATIVE nickel-responsive regulator|Saccharolobus islandicus (strain

Query: 2 ILYGILSL 9
I+YGI++L
Sbjct: 51 IIYGIINL 58


>sp|NIKR_SACI6|PUTATIVE nickel-responsive regulator|Saccharolobus islandicus (strain

Query: 2 ILYGILSL 9
I+YGI++L
Sbjct: 51 IIYGIINL 58


>sp|NIKR_SACI4|PUTATIVE nickel-responsive regulator|Saccharolobus islandicus (strain

Query: 2 ILYGILSL 9
I+YGI++L
Sbjct: 51 IIYGIINL 58


>sp|NIKR_SACI3|PUTATIVE nickel-responsive regulator|Saccharolobus islandicus (strain

Query: 2 ILYGILSL 9
I+YGI++L
Sbjct: 51 IIYGIINL 58


>sp|NIKR_SACI2|PUTATIVE nickel-responsive regulator|Saccharolobus islandicus (strain

Query: 2 ILYGILSL 9
I+YGI++L
Sbjct: 51 IIYGIINL 58


>sp|NIKR_SACI1|PUTATIVE nickel-responsive regulator|Saccharolobus islandicus (strain

Query: 2 ILYGILSL 9
I+YGI++L
Sbjct: 51 IIYGIINL 58


>sp|NIKR_SACS2|PUTATIVE nickel-responsive regulator|Saccharolobus solfataricus (strain

Query: 2 ILYGILSL 9
I+YGI++L
Sbjct: 51 IIYGIINL 58




123|SequenceR|620|611|FVNKKTILYG

>sp|THIOL_METJA|ACETYL-COA acetyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FVNKKTILY 9
FVNK I+Y
Sbjct: 227 FVNKDDIIY 235


>sp|AROE_NITMS|SHIKIMATE dehydrogenase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 2 VNKKTILY 9
VN+KT++Y
Sbjct: 208 VNEKTVVY 215


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VNKKTILY 9
VNK+ ILY
Sbjct: 461 VNKEDILY 468


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 2 VNKKTILYG 10
+ +KTI YG
Sbjct: 551 IQEKTIFYG 559


>sp|Y047_METJA|PROBABLE RNase MJ4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FVNKKTILY 9
+ N KTILY
Sbjct: 154 YQNNKTILY 162


>sp|AROD_SULTO|3-DEHYDROQUINATE dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VNKKTILY 9
+NKK ILY
Sbjct: 78 LNKKNILY 85


>sp|K6PF_THELI|ADP-SPECIFIC phosphofructokinase|Thermococcus litoralis

Query: 1 FVNKKTILY 9
FVN+ +LY
Sbjct: 133 FVNRDNLLY 141




124|SequenceR|625|616|HGTGIFVNKK

>sp|IF6_METLZ|TRANSLATION initiation factor 6|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GTGIFVNKK 10
GTG+ +N K
Sbjct: 191 GTGLLINSK 199


>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GTGIFVNKK 10
G G++V+KK
Sbjct: 445 GAGVYVHKK 453


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 HGTGIFVN 8
HGT +F++
Sbjct: 539 HGTNVFID 546


>sp|RL37A_NATPD|LARGE ribosomal subunit protein eL43|Natronomonas pharaonis (strain

Query: 2 GTGIFVNKK 10
GTGI+VN++
Sbjct: 46 GTGIWVNEE 54


>sp|HEM3_PICTO|PROBABLE porphobilinogen deaminase|Picrophilus torridus (strain ATCC

Query: 2 GTGIFVN 8
GTG+FV+
Sbjct: 53 GTGVFVD 59


>sp|PURP_PYRFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GTGIFVN 8
GT IFVN
Sbjct: 291 GTNIFVN 297


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 HGTGIFVNKK 10
HG G+ ++KK
Sbjct: 447 HGAGLHLHKK 456


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HGTGIFVNKK 10
+G +FVNK+
Sbjct: 928 NGIDVFVNKR 937


>sp|AMPP1_ARCFU|AMP phosphorylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GTGIFVNKK 10
G G++V+KK
Sbjct: 446 GAGVYVHKK 454


>sp|Y635_METJA|UNCHARACTERIZED protein MJ0635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TGIFVNK 9
TGI++NK
Sbjct: 82 TGIYINK 88


>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HGTGIFVNKK 10
H IF+NKK
Sbjct: 346 HEIEIFLNKK 355


>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HGTGIFVNKK 10
HG G++++ K
Sbjct: 447 HGAGLYLHAK 456


>sp|Y410_METJA|UNCHARACTERIZED ATP-binding protein MJ0410|Methanocaldococcus jannaschii (strain

Query: 3 TGIFVNK 9
TGI VNK
Sbjct: 167 TGIIVNK 173


>sp|LIPB_PYRAR|PROBABLE octanoyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 HGTGIFVN 8
HG ++VN
Sbjct: 142 HGVAVYVN 149


>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 TGIFVNK 9
TGI VNK
Sbjct: 340 TGIMVNK 346




125|SequenceR|630|621|IKALLHGTGI

>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 IKALLHGTG 9
+K L+HG G
Sbjct: 373 VKVLIHGEG 381


>sp|CHEF2_HALS3|TAXIS protein CheF2|Halobacterium salinarum (strain ATCC 29341

Query: 2 KALLHGTGI 10
KAL+HGT +
Sbjct: 102 KALVHGTTV 110


>sp|KAE1B_METMJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 5 LHGTGI 10
LHGTGI
Sbjct: 435 LHGTGI 440


>sp|COFC_METPE|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 IKALLHGTG 9
+ L+HGTG
Sbjct: 174 VDLLIHGTG 182


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ALLHGTGI 10
ALL GTGI
Sbjct: 445 ALLRGTGI 452


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 ALLHGTG 9
A+LHG G
Sbjct: 300 AMLHGAG 306


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 ALLHGTG 9
A+LHG G
Sbjct: 302 AMLHGAG 308


>sp|RL14E_THEKO|LARGE ribosomal subunit protein eL14|Thermococcus kodakarensis (strain

Query: 1 IKALLHGTGI 10
IKA L G GI
Sbjct: 71 IKAALEGAGI 80


>sp|COFC_METBF|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IKALLHGTG 9
++ L+HG+G
Sbjct: 176 VELLIHGSG 184


>sp|XERA_PYRFU|TYROSINE recombinase XerA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IKALLHGTGI 10
I LL+GTG+
Sbjct: 125 IVLLLYGTGL 134




126|SequenceR|635|626|LSSVLIKALL

***** No hits found ******


127|SequenceR|640|631|DKFRYLSSVL

>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 1 DKFRYLSSVL 10
D F+YL+S+L
Sbjct: 126 DAFQYLNSIL 135


>sp|Y632_METJA|UNCHARACTERIZED ATP-binding protein MJ0632|Methanocaldococcus jannaschii (strain

Query: 3 FRYLSSVL 10
FRY++SVL
Sbjct: 136 FRYITSVL 143


>sp|TSGCD_HALVD|PUTATIVE glucose ABC transporter permease|Haloferax volcanii (strain ATCC

Query: 2 KFRYLSSVL 10
KFRYL+ ++
Sbjct: 189 KFRYLAVII 197


>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DKFRYLSSVL 10
D+F Y+ SVL
Sbjct: 280 DRFPYIYSVL 289


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 1 DKFRYLSSVL 10
D F+YL+S+L
Sbjct: 122 DAFQYLNSLL 131


>sp|NADB_PYRAB|L-ASPARTATE oxidase|Pyrococcus abyssi (strain GE5 /

Query: 1 DKFRYLSSVL 10
D+F Y+ SVL
Sbjct: 280 DRFPYVYSVL 289


>sp|HOSA_SACS2|HOMOCITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DKFRYLSSVL 10
DK +Y+SS++
Sbjct: 256 DKLQYVSSLI 265


>sp|HOSA_SACI2|HOMOCITRATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DKFRYLSSVL 10
DK +Y+SS++
Sbjct: 256 DKLQYVSSLV 265


>sp|HOSA_SACI7|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DKFRYLSSVL 10
DK +Y+SS++
Sbjct: 256 DKLQYVSSLV 265


>sp|HOSA_SACI6|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DKFRYLSSVL 10
DK +Y+SS++
Sbjct: 256 DKLQYVSSLV 265


>sp|HOSA_SACI4|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DKFRYLSSVL 10
DK +Y+SS++
Sbjct: 256 DKLQYVSSLV 265


>sp|HOSA_SACI3|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DKFRYLSSVL 10
DK +Y+SS++
Sbjct: 256 DKLQYVSSLV 265


>sp|HOSA_SACI1|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DKFRYLSSVL 10
DK +Y+SS++
Sbjct: 256 DKLQYVSSLV 265


>sp|TRUD_THESM|PROBABLE tRNA pseudouridine synthase D|Thermococcus sibiricus (strain DSM

Query: 3 FRYLSS 8
FRYLSS
Sbjct: 10 FRYLSS 15




128|SequenceR|645|636|QIEAVDKFRY

>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 EAVDKFR 9
EA+DKFR
Sbjct: 259 EAMDKFR 265


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 EAVDKFRY 10
EAVDK +Y
Sbjct: 272 EAVDKLKY 279


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IEAVDKFR 9
+EA+DKF+
Sbjct: 212 VEALDKFQ 219


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 2 IEAVDKFRY 10
I+ +DK RY
Sbjct: 300 IKVIDKLRY 308


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 2 IEAVDKFRY 10
I+ +DK RY
Sbjct: 264 IKVIDKLRY 272




129|SequenceR|650|641|QFGKTQIEAV

>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 FGKTQIEAV 10
FGKT EA+
Sbjct: 140 FGKTSREAI 148


>sp|Y1629_METJA|UPF0282 protein MJ1629|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QFGKTQIE 8
+FGKT+I+
Sbjct: 143 KFGKTEIK 150


>sp|PTH_SULTO|PEPTIDYL-TRNA hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GKTQIE 8
GKTQIE
Sbjct: 89 GKTQIE 94




130|SequenceR|655|646|IALITQFGKT

>sp|MTIP_METTH|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanothermobacter

Query: 2 ALITQFGKT 10
+LIT +GKT
Sbjct: 24 SLITPYGKT 32


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IALITQFG 8
+ALIT FG
Sbjct: 823 LALITNFG 830


>sp|PRPB_AERPE|2-METHYLISOCITRATE lyase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IALITQFGKT 10
+A +T+FGKT
Sbjct: 210 LANMTEFGKT 219




131|SequenceR|660|651|ASLKLIALIT

***** No hits found ******


132|SequenceR|665|656|LKSFSASLKL

>sp|SRP54_THEAC|SIGNAL recognition particle 54 kDa|Thermoplasma acidophilum (strain ATCC

Query: 1 LKSFSASLK 9
L+SFSASL+
Sbjct: 3 LESFSASLR 11




133|SequenceR|670|661|SHHVLLKSFS

>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HHVLLKSFS 10
HH+L SFS
Sbjct: 233 HHMLKMSFS 241


>sp|CS3HD_METJA|CRISPR-ASSOCIATED endonuclease Cas3-HD|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SHHVLLKSF 9
++H+LLK F
Sbjct: 99 TYHILLKKF 107


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SHHVLLKSFS 10
+H+V L SFS
Sbjct: 232 AHYVKLPSFS 241


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SHHVLLKSFS 10
+H+V L SFS
Sbjct: 232 AHYVKLPSFS 241


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 SHHVLLKSFS 10
+H+V L SFS
Sbjct: 232 AHYVKLPSFS 241




134|SequenceR|675|666|IVLDFSHHVL

>sp|RL10E_SULTO|LARGE ribosomal subunit protein uL16|Sulfurisphaera tokodaii (strain

Query: 1 IVLDFSHHVL 10
IVL + HHV+
Sbjct: 86 IVLKYPHHVI 95


>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 DFSHHV 9
D SHHV
Sbjct: 5 DLSHHV 10


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 1 IVLDFSHH 8
+V+DFS H
Sbjct: 340 LVVDFSDH 347




135|SequenceR|680|671|SMQHFIVLDF

>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SMQHFIVLD 9
SM+H I++D
Sbjct: 388 SMRHKIIID 396




136|SequenceR|685|676|EMINSSMQHF

>sp|Y215_NITMS|MEMO1 family protein Nmar_0215|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EMINSSMQH 9
EMINS +QH
Sbjct: 21 EMINSCIQH 29




137|SequenceR|690|681|QQDKQEMINS

>sp|Y1526_METJA|UPF0280 protein MJ1526|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QDKQEMINS 10
+D++EMIN+
Sbjct: 189 RDEEEMINN 197


>sp|MTIP_METJA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanocaldococcus

Query: 3 DKQEMINS 10
DK+E+IN+
Sbjct: 17 DKEEIINT 24


>sp|HIS2_META3|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 QDKQEMI 8
QDKQE+I
Sbjct: 57 QDKQELI 63


>sp|Y1453_METJA|UNCHARACTERIZED protein MJ1453|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QQDKQEMIN 9
+ DK+EMIN
Sbjct: 153 EDDKKEMIN 161




138|SequenceR|695|686|CLNLFQQDKQ

***** No hits found ******


139|SequenceR|700|691|AFCKCCLNLF

>sp|Y1635_METJA|TNPB-LIKE protein MJ1635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FCKCCLNLF 10
+C CLN F
Sbjct: 345 YCSNCLNSF 353


>sp|NADK_PICTO|NAD kinase|Picrophilus torridus (strain ATCC 700027

Query: 3 CKCCLNL 9
CK C+N+
Sbjct: 11 CKSCINI 17


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 2 FCKCCLN 8
FCKC N
Sbjct: 24 FCKCPTN 30


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 3 CKCCLNLF 10
CK C+N +
Sbjct: 597 CKICINAY 604


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 3 CKCCLNLF 10
CK C+N +
Sbjct: 597 CKICINAY 604


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 3 CKCCLNLF 10
CK C+N +
Sbjct: 597 CKICINAY 604


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 CKCCLNLF 10
CK CL F
Sbjct: 88 CKSCLESF 95


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 CKCCLNLF 10
CK CL F
Sbjct: 88 CKSCLESF 95




140|SequenceR|705|696|DMAVKAFCKC

>sp|Y487_THEAC|PROTEIN Ta0487|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DMAVKAFCKC 10
DM V+ F KC
Sbjct: 76 DMTVEGFAKC 85


>sp|SECY_METVA|PROTEIN translocase subunit SecY|Methanococcus vannielii

Query: 1 DMAVKAFCK 9
DMA+K F K
Sbjct: 354 DMAIKGFRK 362




141|SequenceR|710|701|NKLYDDMAVK

>sp|MOAE_PYRAB|MOLYBDOPTERIN synthase catalytic subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 YDDMAVK 10
YD+MA+K
Sbjct: 56 YDEMAIK 62


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 2 KLYDDMAVK 10
KLYDD + K
Sbjct: 60 KLYDDYSSK 68


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NKLYDDMAV 9
N+LY MAV
Sbjct: 294 NRLYTTMAV 302


>sp|Y780_METJA|UNCHARACTERIZED protein MJ0780|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KLYDDMAV 9
KLYD M V
Sbjct: 234 KLYDQMIV 241




142|SequenceR|715|706|RELMVNKLYD

>sp|RL30_HYPBU|LARGE ribosomal subunit protein uL30|Hyperthermus butylicus (strain DSM

Query: 2 ELMVNKLYD 10
E+M++KLYD
Sbjct: 123 EIMLHKLYD 131


>sp|SYK_SULAC|LYSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RELMVNKLYD 10
R LM+ KL+D
Sbjct: 359 RGLMIEKLFD 368


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RELMVNKLYD 10
R LM+ KL+D
Sbjct: 352 RGLMIEKLFD 361


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 RELMVNKLYD 10
REL KLYD
Sbjct: 439 RELRERKLYD 448


>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ELMVNKLYD 10
++++NKLY+
Sbjct: 211 DILINKLYN 219


>sp|MCRW_METFV|METHYL-COENZYME M reductase II operon|Methanothermus fervidus (strain ATCC 43054

Query: 2 ELMVNKLYD 10
E ++NK+YD
Sbjct: 26 ETILNKIYD 34


>sp|DNAG_METTH|DNA primase DnaG|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RELMVNKLYD 10
RE+ V LYD
Sbjct: 316 REVKVENLYD 325




143|SequenceR|720|711|NQDCARELMV

>sp|MPTA_META3|GTP cyclohydrolase MptA|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 QDCARELM 9
+DCARE++
Sbjct: 255 EDCAREMI 262


>sp|MPTA_METVS|GTP cyclohydrolase MptA|Methanococcus vannielii (strain ATCC 35089

Query: 2 QDCARELM 9
+DCARE++
Sbjct: 257 EDCAREMI 264


>sp|MPTA_METMP|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain DSM 14266

Query: 2 QDCARELM 9
+DCARE++
Sbjct: 257 EDCAREMI 264


>sp|MPTA_METM6|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C6 /

Query: 2 QDCARELM 9
+DCARE++
Sbjct: 257 EDCAREMI 264


>sp|MPTA_METM5|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C5 /

Query: 2 QDCARELM 9
+DCARE++
Sbjct: 257 EDCAREMI 264


>sp|MPTA_METM7|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C7 /

Query: 2 QDCARELM 9
+DCARE++
Sbjct: 257 EDCAREMI 264


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NQDCARELM 9
N D AREL+
Sbjct: 565 NPDAARELL 573


>sp|SPSS_METJA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NQDCAR 6
N DCAR
Sbjct: 72 NMDCAR 77


>sp|MPTA_METKA|GTP cyclohydrolase MptA|Methanopyrus kandleri (strain AV19 /

Query: 2 QDCARELM 9
+DC RE++
Sbjct: 270 EDCVREMI 277




144|SequenceR|725|716|VMISNNQDCA

>sp|PYLD_METAC|PYRROLYSINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ISNNQDC 9
I+NNQ C
Sbjct: 118 IANNQPC 124




145|SequenceR|730|721|LLLCEVMISN

>sp|COFD_METJA|2-PHOSPHO-L-LACTATE transferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CEVMISN 10
CEV+I+N
Sbjct: 282 CEVLITN 288




146|SequenceR|735|726|ADAGLLLLCE

>sp|XDH2_HALVD|D-XYLOSE 1-dehydrogenase (NADP(+)) 2|Haloferax volcanii (strain ATCC 29605

Query: 1 ADAGLLLLCE 10
AD GL +LCE
Sbjct: 83 ADRGLHVLCE 92


>sp|PYRF_NATPD|OROTIDINE 5'-phosphate decarboxylase|Natronomonas pharaonis (strain ATCC

Query: 1 ADAGLLLLCE 10
AD G+ +LC
Sbjct: 135 ADKGVFILCR 144


>sp|OTSBH_THEAC|TREHALOSE-6-PHOSPHATE phosphatase-related protein|Thermoplasma acidophilum (strain ATCC

Query: 1 ADAGLLLL 8
ADAGLL L
Sbjct: 22 ADAGLLSL 29


>sp|COFG_METPE|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ADAGLLLLC 9
ADAG+L+ C
Sbjct: 246 ADAGVLVGC 254


>sp|GVPE2_HALSA|TRANSCRIPTIONAL activator GvpE2|Halobacterium salinarum (strain ATCC 700922

Query: 1 ADAGLLLLCE 10
ADAGLL + E
Sbjct: 131 ADAGLLEMSE 140


>sp|PGP_METKA|PHOSPHOGLYCOLATE phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 4 GLLLLCE 10
GLL++CE
Sbjct: 159 GLLVICE 165




147|SequenceR|740|731|EKAQNADAGL

***** No hits found ******


148|SequenceR|745|736|ILSSGEKAQN

>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILSSGEKA 8
IL+SGE+A
Sbjct: 373 ILASGERA 380




149|SequenceR|750|741|ECVQCILSSG

>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ECVQCILSSG 10
ECV+ +LS+G
Sbjct: 263 ECVEDVLSAG 272


>sp|DNLI_METM7|DNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 ECVQCILSSG 10
ECV LSSG
Sbjct: 301 ECVAMDLSSG 310


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 ECVQCILSSG 10
ECV LSSG
Sbjct: 301 ECVAMDLSSG 310


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 ECVQCILSSG 10
ECV LSSG
Sbjct: 301 ECVAMDLSSG 310




150|SequenceR|755|746|PSSEKECVQC

>sp|Y1036_METJA|UNCHARACTERIZED protein MJ1036|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PSSEKECVQC 10
P S+K CV+C
Sbjct: 85 PLSKKYCVEC 94


>sp|FLAK_METJA|PREFLAGELLIN peptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PSSEKEC 7
PS+EK+C
Sbjct: 181 PSAEKDC 187


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 5 KECVQC 10
K+CVQC
Sbjct: 579 KKCVQC 584


>sp|ASSTI_METAC|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur subunit|Methanosarcina

Query: 3 SEKECVQC 10
EK+C+QC
Sbjct: 107 DEKKCIQC 114


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 1 PSSEKECVQC 10
P SEK V+C
Sbjct: 235 PYSEKLLVEC 244


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 EKECVQC 10
+K+C++C
Sbjct: 20 KKQCIKC 26


>sp|Y750_METJA|UNCHARACTERIZED protein MJ0750|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EKECVQC 10
+KEC++C
Sbjct: 210 QKECIRC 216




151|SequenceR|760|751|LEVLKPSSEK

>sp|RSMA_ARCFU|PROBABLE ribosomal RNA small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 LEVLKPSS 8
LE++KPSS
Sbjct: 153 LEIVKPSS 160


>sp|AROD_PYRAB|3-DEHYDROQUINATE dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 LEVLKPSSEK 10
LE+L+P SEK
Sbjct: 39 LELLEPYSEK 48


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 1 LEVLKPSS 8
+EVLKP+S
Sbjct: 409 IEVLKPAS 416


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 1 LEVLKPSS 8
+EVLKP+S
Sbjct: 409 IEVLKPAS 416


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 LEVLKPSS 8
+EVLKP+S
Sbjct: 409 IEVLKPAS 416


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 1 LEVLKPSS 8
+EVLKP+S
Sbjct: 409 IEVLKPAS 416


>sp|TRPB_METVO|TRYPTOPHAN synthase beta chain|Methanococcus voltae

Query: 2 EVLKPSSEK 10
EVLKP+ E+
Sbjct: 23 EVLKPAVEE 31


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 LEVLKPSS 8
+EVLKP+S
Sbjct: 409 VEVLKPAS 416


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LEVLKPSS 8
+EVLKP+S
Sbjct: 409 VEVLKPAS 416


>sp|MTTC1_METMA|TRIMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LEVLKPSSEK 10
+EV+KP EK
Sbjct: 77 IEVIKPEMEK 86


>sp|MTTC2_METAC|TRIMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LEVLKPSSEK 10
+EVL+P EK
Sbjct: 77 IEVLQPEMEK 86


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VLKPSSE 9
VLKPSS+
Sbjct: 170 VLKPSSD 176




152|SequenceR|765|756|GSNLLLEVLK

>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GSNLLLEVLK 10
G+NL LE+L+
Sbjct: 374 GANLALEILR 383


>sp|DNLI_METM7|DNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GSNLLLEVLK 10
G NLLLE +K
Sbjct: 65 GPNLLLEAVK 74


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 GSNLLLEVLK 10
G NLLLE +K
Sbjct: 65 GPNLLLEAVK 74


>sp|DNLI_METMP|DNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GSNLLLEVLK 10
G NLLLE +K
Sbjct: 65 GPNLLLEAVK 74


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GSNLLLEVLK 10
G NLL+E +K
Sbjct: 65 GPNLLIEAIK 74


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GSNLLLEVLK 10
G NLL+E +K
Sbjct: 65 GPNLLIEAVK 74




153|SequenceR|770|761|DQERSGSNLL

>sp|PYRE_THEAC|OROTATE phosphoribosyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 DQERSGSNLL 10
D+E GS+LL
Sbjct: 141 DREEGGSDLL 150




154|SequenceR|775|766|LAKRVDQERS

>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain ATCC

Query: 2 AKRVDQERS 10
A R+DQER+
Sbjct: 407 AARIDQERA 415


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 AKRVDQE 8
AKRVD+E
Sbjct: 33 AKRVDEE 39


>sp|TRPD_NATPD|ANTHRANILATE phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC

Query: 2 AKRVDQERS 10
A+R+D +RS
Sbjct: 63 ARRIDPDRS 71




155|SequenceR|780|771|GISITLAKRV

>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 GISITLAKRV 10
GI++TLA R+
Sbjct: 354 GIAMTLAPRL 363




156|SequenceR|785|776|QSDGKGISIT

>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QSDGKGISI 9
Q++GKGI+I
Sbjct: 255 QTEGKGINI 263


>sp|ARGB_METS3|ACETYLGLUTAMATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 DGKGISIT 10
DGKGIS++
Sbjct: 112 DGKGISLS 119




157|SequenceR|790|781|LLSIIQSDGK

>sp|REG6_PYRHO|HTH-TYPE transcriptional regulator FL11|Pyrococcus horikoshii (strain ATCC

Query: 1 LLSIIQSDGK 10
++ I+Q+DGK
Sbjct: 12 IIKILQNDGK 21


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LLSIIQSDGK 10
L+SII S+G+
Sbjct: 435 LISIIASEGE 444




158|SequenceR|795|786|ALRRLLLSII

***** No hits found ******


159|SequenceR|800|791|NAVDLALRRL

>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NAVDLALRRL 10
NA+D+A+++L
Sbjct: 418 NAIDIAMKKL 427


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NAVDLALRRL 10
NA+D+A+++L
Sbjct: 418 NAIDIAMKKL 427


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 NAVDLALRRL 10
NA+D+A+++L
Sbjct: 418 NAIDIAMKKL 427


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 NAVDLALRRL 10
NA+D+A+++L
Sbjct: 418 NAIDIAMKKL 427


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 1 NAVDLALRRL 10
NA+D+A+++L
Sbjct: 418 NAIDIAMKKL 427


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 NAVDLALRR 9
NA+D ALRR
Sbjct: 326 NALDPALRR 334


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 3 VDLALRRL 10
VDLA RRL
Sbjct: 459 VDLAARRL 466


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 NAVDLALRR 9
+AVD ALRR
Sbjct: 336 DAVDPALRR 344


>sp|PSB2_PYRIL|PROTEASOME subunit beta 2|Pyrobaculum islandicum (strain DSM 4184

Query: 1 NAVDLALRRL 10
+AVDLA+R +
Sbjct: 153 DAVDLAIRSV 162


>sp|PSA_HALSA|PROTEASOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 NAVDLALRRL 10
+ +DLALR L
Sbjct: 190 DGIDLALRAL 199


>sp|PSA_HALS3|PROTEASOME subunit alpha|Halobacterium salinarum (strain ATCC 29341

Query: 1 NAVDLALRRL 10
+ +DLALR L
Sbjct: 190 DGIDLALRAL 199


>sp|RS7_SULTO|SMALL ribosomal subunit protein uS7|Sulfurisphaera tokodaii (strain DSM

Query: 3 VDLALRRL 10
VDLALR L
Sbjct: 137 VDLALRHL 144


>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM

Query: 1 NAVDLALRRL 10
N+V+ ALRR+
Sbjct: 22 NSVEAALRRV 31


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 1 NAVDLALR 8
N +DLALR
Sbjct: 337 NYIDLALR 344


>sp|RS7_DESMO|SMALL ribosomal subunit protein uS7|Desulfurococcus mucosus

Query: 3 VDLALRRL 10
+DLALR L
Sbjct: 141 IDLALRHL 148


>sp|RS7_DESA1|SMALL ribosomal subunit protein uS7|Desulfurococcus amylolyticus (strain

Query: 3 VDLALRRL 10
+DLALR L
Sbjct: 141 IDLALRHL 148


>sp|RS7_SULAC|SMALL ribosomal subunit protein uS7|Sulfolobus acidocaldarius (strain

Query: 3 VDLALRRL 10
VDLALR L
Sbjct: 138 VDLALRHL 145




160|SequenceR|805|796|LCISNNAVDL

>sp|DADD_METMA|5'-DEOXYADENOSINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CISNNAVDL 10
C SNN +DL
Sbjct: 301 CASNNNLDL 309


>sp|DADD_METAC|5'-DEOXYADENOSINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CISNNAVDL 10
C SNN +DL
Sbjct: 301 CASNNNLDL 309


>sp|DADD_METBF|5'-DEOXYADENOSINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CISNNAVDL 10
C SNN +DL
Sbjct: 301 CASNNNLDL 309


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 2 CISNNAVDL 10
C SNN +DL
Sbjct: 311 CASNNNLDL 319


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 2 CISNNAV 8
CI NN+V
Sbjct: 91 CIKNNSV 97


>sp|PYRI_METS5|ASPARTATE carbamoyltransferase regulatory chain|Metallosphaera sedula (strain

Query: 2 CISNNAVD 9
CI+NN V+
Sbjct: 116 CITNNDVE 123


>sp|PYRI_SACI7|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 2 CISNNAVD 9
CI+NN V+
Sbjct: 118 CITNNDVE 125


>sp|PYRI_SACI6|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 2 CISNNAVD 9
CI+NN V+
Sbjct: 118 CITNNDVE 125


>sp|PYRI_SACI4|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 2 CISNNAVD 9
CI+NN V+
Sbjct: 118 CITNNDVE 125


>sp|PYRI_SACI3|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 2 CISNNAVD 9
CI+NN V+
Sbjct: 118 CITNNDVE 125


>sp|PYRI_SACI2|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 2 CISNNAVD 9
CI+NN V+
Sbjct: 118 CITNNDVE 125


>sp|PYRI_SACI1|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 2 CISNNAVD 9
CI+NN V+
Sbjct: 118 CITNNDVE 125


>sp|PYRI_SULTO|ASPARTATE carbamoyltransferase regulatory chain|Sulfurisphaera tokodaii

Query: 1 LCISNNAVD 9
+CI+NN V+
Sbjct: 114 MCITNNDVE 122


>sp|PYRI_SACS2|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus solfataricus

Query: 2 CISNNAVD 9
CI+NN V+
Sbjct: 118 CITNNDVE 125




161|SequenceR|810|801|ICFGGLCISN

>sp|AROK_PYRAB|SHIKIMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 FGGLCISN 10
FGGLCI++
Sbjct: 145 FGGLCITD 152


>sp|AROK_PYRFU|SHIKIMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FGGLCISN 10
FGGLC+++
Sbjct: 144 FGGLCLTD 151


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 FGGLCISN 10
GGLCI +
Sbjct: 140 LGGLCIEH 147




162|SequenceR|815|806|PEVKGICFGG

>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 1 PEVKGICFGG 10
PE+K I FGG
Sbjct: 47 PELKMIYFGG 56


>sp|RNZ_METMP|RIBONUCLEASE Z|Methanococcus maripaludis (strain DSM 14266

Query: 1 PEVKGICFG 9
P KGIC G
Sbjct: 197 PPKKGICVG 205


>sp|RNZ_METM7|RIBONUCLEASE Z|Methanococcus maripaludis (strain C7 /

Query: 1 PEVKGICFG 9
P KGIC G
Sbjct: 197 PPKKGICVG 205


>sp|RNZ_METM6|RIBONUCLEASE Z|Methanococcus maripaludis (strain C6 /

Query: 1 PEVKGICFG 9
P KGIC G
Sbjct: 197 PPKKGICVG 205


>sp|RNZ_METM5|RIBONUCLEASE Z|Methanococcus maripaludis (strain C5 /

Query: 1 PEVKGICFG 9
P KGIC G
Sbjct: 197 PPKKGICVG 205


>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 PEVKGICFGG 10
PE+KGI G
Sbjct: 42 PEIKGIILSG 51


>sp|GUAAA_METM7|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 PEVKGICFGG 10
PE+KGI G
Sbjct: 42 PEIKGIILSG 51


>sp|RL2_METMJ|LARGE ribosomal subunit protein uL2|Methanoculleus marisnigri (strain

Query: 1 PEVKGICF 8
P VKG+C
Sbjct: 188 PRVKGVCM 195


>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 1 PEVKGICFGG 10
PE+ +C GG
Sbjct: 160 PELMEVCIGG 169


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PEVKGICFGG 10
PEV G+ GG
Sbjct: 309 PEVDGLYIGG 318


>sp|APT_METVS|ADENINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 PEVKGICFG 9
PE +G FG
Sbjct: 55 PEARGFLFG 63


>sp|KAD_HALSA|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PEVKGIC 7
PE +G+C
Sbjct: 143 PETEGVC 149


>sp|KAD_HALS3|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PEVKGIC 7
PE +G+C
Sbjct: 143 PETEGVC 149


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 2 EVKGICFGG 10
E+KGI GG
Sbjct: 215 ELKGIIIGG 223


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 2 EVKGICFGG 10
E+KGI GG
Sbjct: 215 ELKGIIIGG 223


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 EVKGICFGG 10
E+KGI GG
Sbjct: 218 ELKGIIIGG 226


>sp|GUAAA_METMP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 PEVKGICFGG 10
PE+KG+ G
Sbjct: 42 PEIKGVILSG 51


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 2 EVKGICFGG 10
E+KGI GG
Sbjct: 215 ELKGILIGG 223


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PEVKGICFG 9
P+VKG+ G
Sbjct: 20 PKVKGVLLG 28


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PEVKGIC 7
P+V GIC
Sbjct: 142 PKVPGIC 148


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PEVKGIC 7
P+V GIC
Sbjct: 142 PKVPGIC 148


>sp|SYH_METMA|HISTIDINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PEVKGI 6
PEVKGI
Sbjct: 221 PEVKGI 226


>sp|AROC_KORCO|CHORISMATE synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PEVKGICFG 9
P VKG+ FG
Sbjct: 242 PAVKGVEFG 250


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EVKGICFGG 10
E+KGI GG
Sbjct: 218 ELKGIIVGG 226


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 EVKGICFGG 10
E+KGI GG
Sbjct: 215 ELKGIIVGG 223


>sp|APT_METMP|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 PEVKGICFG 9
PE +G FG
Sbjct: 55 PEARGFLFG 63


>sp|Y1674_SULAC|UNCHARACTERIZED protein Saci_1674|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PEVKGICFGG 10
P V + FGG
Sbjct: 229 PRVTSVIFGG 238


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EVKGICFG 9
E++GI FG
Sbjct: 391 EIEGIIFG 398


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 1 PEVKGICFG 9
PEV+GI G
Sbjct: 162 PEVEGILAG 170


>sp|Y087_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 1 PEVKGICFGG 10
P + IC GG
Sbjct: 282 PHIVRICIGG 291


>sp|APT_METM5|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 PEVKGICFG 9
PE +G FG
Sbjct: 55 PEARGFLFG 63


>sp|APT_METM7|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 PEVKGICFG 9
PE +G FG
Sbjct: 55 PEARGFLFG 63


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PEVKGICFGG 10
P+V G+ GG
Sbjct: 285 PDVDGLYIGG 294


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 EVKGICFGG 10
E+KG+ GG
Sbjct: 215 ELKGVLIGG 223


>sp|MCH_METTH|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanothermobacter thermautotrophicus (strain

Query: 5 GICFGG 10
G+C GG
Sbjct: 54 GVCLGG 59


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 3 VKGICF 8
VKGIC+
Sbjct: 350 VKGICY 355




163|SequenceR|820|811|PGLWSPEVKG

>sp|SFSA_AERPE|SUGAR fermentation stimulation protein homolog|Aeropyrum pernix (strain

Query: 2 GLWSPEVKG 10
GLW+ EVKG
Sbjct: 124 GLWAVEVKG 132


>sp|Y1521_ARCFU|ADP-RIBOSE glycohydrolase AF_1521|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GLWSPEVK 9
G+WS E+K
Sbjct: 106 GMWSEELK 113


>sp|LEU1_METMA|PROBABLE 2-isopropylmalate synthase|Methanosarcina mazei (strain ATCC

Query: 1 PGLWSPEVKG 10
PG+ +PE+ G
Sbjct: 317 PGIMTPEMVG 326


>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain ATCC

Query: 1 PGLWSPEVKG 10
PG+ +PE+ G
Sbjct: 317 PGIMTPEMVG 326


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 2 GLWSPEVK 9
G W+P++K
Sbjct: 193 GGWAPQIK 200


>sp|NTPTH_HYPBU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Hyperthermus butylicus (strain DSM 5456

Query: 2 GLWSPEVKG 10
G + PEV+G
Sbjct: 35 GFYCPEVRG 43


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGLWS 5
PGLWS
Sbjct: 309 PGLWS 313


>sp|PEPQ_PYRHO|XAA-PRO dipeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGLWSPEVKG 10
PG++ P++ G
Sbjct: 317 PGIYIPKIGG 326


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGLWSPEV 8
P LW+P V
Sbjct: 142 PLLWTPSV 149


>sp|COXX_SULAC|PROTOHEME IX farnesyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 4 WSPEVKG 10
W P VKG
Sbjct: 77 WRPTVKG 83


>sp|COXX_SULTO|PROTOHEME IX farnesyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 WSPEVKG 10
W P VKG
Sbjct: 93 WRPTVKG 99


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 GLWSPEV 8
G WSPEV
Sbjct: 300 GEWSPEV 306


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LWSPEVKG 10
LW PE G
Sbjct: 437 LWEPEFYG 444


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGLWSPE 7
P +W PE
Sbjct: 312 PDVWDPE 318


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LWSPEVKG 10
LW +VKG
Sbjct: 459 LWMKDVKG 466




164|SequenceR|825|816|KDPFLPGLWS

>sp|CBIM_HALS3|PUTATIVE cobalt transport protein CbiM|Halobacterium salinarum (strain

Query: 4 FLPGLWS 10
FLPG+W+
Sbjct: 7 FLPGIWA 13


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 3 PFLPGLWS 10
PFLP +W+
Sbjct: 169 PFLPPMWA 176


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 3 PFLPGLWS 10
PFLP +W+
Sbjct: 169 PFLPPMWA 176


>sp|CDC45_SULAC|CELL division control protein 45|Sulfolobus acidocaldarius (strain ATCC

Query: 2 DPFLPGL 8
DP++PG+
Sbjct: 158 DPYIPGM 164


>sp|DCDB_METMJ|DCTP deaminase, dUMP-forming|Methanoculleus marisnigri (strain ATCC

Query: 2 DPFLPGL 8
DPF PGL
Sbjct: 20 DPFEPGL 26


>sp|CDC45_SACS2|CELL division control protein 45|Saccharolobus solfataricus (strain ATCC

Query: 2 DPFLPGL 8
DP++PG+
Sbjct: 167 DPYIPGI 173


>sp|NDK_METAR|NUCLEOSIDE diphosphate kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 PFLPGLWS 10
PF PGL S
Sbjct: 59 PFFPGLVS 66


>sp|NDK_METHJ|NUCLEOSIDE diphosphate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KDPFLPGL 8
+ PF PGL
Sbjct: 54 QKPFFPGL 61


>sp|COBS_THEVO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PFLPGL 8
PF+PGL
Sbjct: 151 PFVPGL 156


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KDPFLP 6
+DPF+P
Sbjct: 161 RDPFMP 166


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KDPFLP 6
+DPF+P
Sbjct: 161 RDPFMP 166


>sp|CYAS_METTP|CYSTEATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 LPGLWS 10
LPG+WS
Sbjct: 43 LPGIWS 48


>sp|NDK_METBF|NUCLEOSIDE diphosphate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PFLPGL 8
PF PGL
Sbjct: 56 PFFPGL 61


>sp|DGGGP_ARCFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DPFLPGLW 9
DPF LW
Sbjct: 40 DPFFSDLW 47


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DPFLPGL 8
+P++PGL
Sbjct: 407 EPYIPGL 413


>sp|NFI_HALMA|ENDONUCLEASE V|Haloarcula marismortui (strain ATCC 43049

Query: 3 PFLPGLWS 10
P++PGL S
Sbjct: 109 PYIPGLLS 116


>sp|NDK_METMJ|NUCLEOSIDE diphosphate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KDPFLPGL 8
+ PF PGL
Sbjct: 54 EKPFFPGL 61


>sp|Y1636_METMA|UNCHARACTERIZED glycosyltransferase MM_1636|Methanosarcina mazei (strain ATCC

Query: 4 FLPGLW 9
F PGLW
Sbjct: 178 FSPGLW 183


>sp|RADA_NANEQ|DNA repair and recombination protein|Nanoarchaeum equitans (strain

Query: 2 DPFLPGL 8
D F+PGL
Sbjct: 262 DSFIPGL 268


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 PGLWS 10
PGLWS
Sbjct: 309 PGLWS 313


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 DPFLPG 7
DP++PG
Sbjct: 23 DPYVPG 28


>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PFLPGLWS 10
P PG WS
Sbjct: 38 PMRPGSWS 45


>sp|CBIM_METST|PUTATIVE cobalt transport protein CbiM|Methanosphaera stadtmanae (strain

Query: 4 FLPGLW 9
FLP LW
Sbjct: 7 FLPPLW 12


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PFLPGLW 9
P PG+W
Sbjct: 934 PLRPGIW 940


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 PFLPG 7
PFLPG
Sbjct: 69 PFLPG 73


>sp|Y896_ARCFU|UNCHARACTERIZED protein AF_0896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KDPFLPGLW 9
K P++ LW
Sbjct: 117 KSPYISNLW 125


>sp|CBIM1_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain

Query: 4 FLPGLW 9
FLPG W
Sbjct: 7 FLPGPW 12


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 5 LPGLW 9
LPG+W
Sbjct: 44 LPGMW 48


>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 2 DPFLPGLWS 10
D F G+WS
Sbjct: 147 DDFRGGMWS 155


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 5 LPGLW 9
LPG+W
Sbjct: 43 LPGMW 47




165|SequenceR|830|821|RLNSTKDPFL

>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 3 NSTKDPFL 10
N TK PF+
Sbjct: 345 NETKSPFV 352


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 1 RLNSTKDPFL 10
R T+DPF+
Sbjct: 367 RSGDTEDPFI 376


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RLNSTKDP 8
R+N KDP
Sbjct: 451 RINGLKDP 458




166|SequenceR|835|826|INTQKRLNST

>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 TQKRLNST 10
TQKR+N T
Sbjct: 329 TQKRVNGT 336


>sp|AROC_METST|CHORISMATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 INTQKRLNST 10
+N +KR NST
Sbjct: 313 VNLEKRENST 322




167|SequenceR|840|831|ALTSAINTQK

>sp|FTSZ2_ARCFU|CELL division protein FtsZ 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ALTSAINTQK 10
A+T AINT K
Sbjct: 56 AMTIAINTDK 65


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 LTSAINTQK 10
LTSAIN K
Sbjct: 205 LTSAINKYK 213




168|SequenceR|845|836|RIVMRALTSA

***** No hits found ******


169|SequenceR|850|841|SKMQYRIVMR

>sp|HERA_SULAC|DNA double-strand break repair helicase|Sulfolobus acidocaldarius

Query: 1 SKMQYRIVMR 10
+ +QYRI+ R
Sbjct: 216 ANIQYRIIRR 225




170|SequenceR|855|846|GEEVASKMQY

>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GEEVASK 7
GEEVAS+
Sbjct: 494 GEEVASR 500


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 1 GEEVASKMQ 9
GE VA++MQ
Sbjct: 532 GESVAAEMQ 540




171|SequenceR|860|851|SGSATGEEVA

>sp|FLAB1_HALSA|FLAGELLIN B1|Halobacterium salinarum (strain ATCC 700922

Query: 2 GSATGEE 8
GSATGEE
Sbjct: 47 GSATGEE 53


>sp|FLAA2_HALSA|FLAGELLIN A2|Halobacterium salinarum (strain ATCC 700922

Query: 2 GSATGEE 8
GSATGEE
Sbjct: 47 GSATGEE 53


>sp|FLAB3_HALSA|FLAGELLIN B3|Halobacterium salinarum (strain ATCC 700922

Query: 2 GSATGEE 8
GSATGEE
Sbjct: 47 GSATGEE 53


>sp|FLAA1_HALSA|FLAGELLIN A1|Halobacterium salinarum (strain ATCC 700922

Query: 2 GSATGEE 8
GSATGEE
Sbjct: 47 GSATGEE 53


>sp|FLAB2_HALSA|FLAGELLIN B2|Halobacterium salinarum (strain ATCC 700922

Query: 2 GSATGEE 8
GSATGEE
Sbjct: 47 GSATGEE 53


>sp|CSG_HALJT|CELL surface glycoprotein|Haloarcula japonica (strain ATCC 49778

Query: 1 SGSATGEEV 9
SGS+TG++V
Sbjct: 652 SGSSTGDQV 660


>sp|Y1150_METTH|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 SGSATGEEVA 10
+G ATGE+V+
Sbjct: 177 TGCATGEDVS 186


>sp|Y252_PYRCJ|UPF0248 protein Pcal_0252|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GSATGEEVA 10
G+A GEEVA
Sbjct: 23 GAAGGEEVA 31


>sp|ARCH_METTH|PROTEIN archease|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SGSATGEEV 9
+G+A GEE+
Sbjct: 97 TGTAMGEEI 105




172|SequenceR|865|856|SFNGDSGSAT

>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FNGDSG 7
FNGD G
Sbjct: 243 FNGDKG 248




173|SequenceR|870|861|SLVDESFNGD

>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 SLVDESFNGD 10
++VD S+ GD
Sbjct: 247 NIVDTSYTGD 256


>sp|IORB_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus horikoshii (strain ATCC

Query: 2 LVDESFNG 9
+V+E FNG
Sbjct: 121 IVEEEFNG 128


>sp|RS4E_HALMA|SMALL ribosomal subunit protein eS4|Haloarcula marismortui (strain ATCC

Query: 2 LVDESFNGD 10
++DE+F GD
Sbjct: 224 VIDENFTGD 232


>sp|RS4E_HALLT|SMALL ribosomal subunit protein eS4|Halorubrum lacusprofundi (strain ATCC

Query: 2 LVDESFNGD 10
++DE+F GD
Sbjct: 223 VIDENFTGD 231


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 2 LVDESFNGD 10
L DE F+GD
Sbjct: 200 LSDEGFSGD 208




174|SequenceR|875|866|WEDFKSLVDE

>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 1 WEDFKSLVDE 10
+E +KSLVDE
Sbjct: 286 YEKYKSLVDE 295


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 WEDFKS 6
WEDF+S
Sbjct: 200 WEDFRS 205


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 WEDFKSLVDE 10
WE FK + D+
Sbjct: 74 WETFKEVTDQ 83


>sp|RPO10_HYPBU|DNA-DIRECTED RNA polymerase subunit Rpo10|Hyperthermus butylicus (strain DSM

Query: 1 WEDFKSLVD 9
WE+F+S V+
Sbjct: 18 WEEFRSRVE 26


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 2 EDFKSLVDE 10
E+FK++VDE
Sbjct: 238 EEFKNIVDE 246


>sp|RPO10_METAR|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocella arvoryzae (strain DSM

Query: 1 WEDFKSLVDE 10
WE++K+ V+E
Sbjct: 17 WEEYKARVEE 26


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 WEDFKSLVDE 10
WEDF+S V++
Sbjct: 372 WEDFESKVND 381


>sp|Y951_METJA|UNCHARACTERIZED protein MJ0951|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEDFKSLVDE 10
++DFK +V+E
Sbjct: 33 FKDFKKIVEE 42


>sp|RPO10_STAMF|DNA-DIRECTED RNA polymerase subunit Rpo10|Staphylothermus marinus (strain ATCC

Query: 1 WEDFKSLVD 9
WE+FK V+
Sbjct: 18 WEEFKKRVE 26


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EDFKSLVD 9
EDF+ LVD
Sbjct: 832 EDFRELVD 839


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 WEDFKSLVDE 10
+ED K+LVD+
Sbjct: 173 FEDLKALVDK 182


>sp|AATC_METS3|A-TYPE ATP synthase subunit C|Methanobrevibacter smithii (strain ATCC

Query: 1 WEDFKSLVD 9
+ED +SL+D
Sbjct: 165 YEDLRSLID 173


>sp|QUEFL_PYRCJ|ARCHAEOSINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EDFKSLVD 9
E+FK +VD
Sbjct: 46 EEFKKMVD 53


>sp|Y1375_METJA|UNCHARACTERIZED membrane protein MJ1375|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DFKSLVD 9
DFK L+D
Sbjct: 198 DFKKLID 204


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 2 EDFKSLVDE 10
EDF +++DE
Sbjct: 329 EDFLTVIDE 337


>sp|COMC_METJA|L-SULFOLACTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EDFKSLVDE 10
E+FK VDE
Sbjct: 276 EEFKRKVDE 284


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WEDFKSLVDE 10
WE F +V+E
Sbjct: 58 WEAFDKIVEE 67


>sp|CS3HE_THETK|CRISPR-ASSOCIATED helicase Cas3|Thermoproteus tenax (strain ATCC 35583

Query: 1 WEDFKSLVDE 10
WED + VD+
Sbjct: 395 WEDAQRAVDK 404


>sp|TRET_PYRHO|TREHALOSE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EDFKSLVDE 10
ED+KS++ E
Sbjct: 16 EDYKSIIGE 24


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 1 WEDFKSLVDE 10
+ D+K ++DE
Sbjct: 179 YPDYKEIIDE 188


>sp|Y727_METJA|UNCHARACTERIZED protein MJ0727|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EDFKSLVDE 10
+DF LVDE
Sbjct: 130 KDFVKLVDE 138


>sp|RPO10_METPE|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanosphaerula palustris (strain

Query: 1 WEDFKSLVD 9
WE+FK D
Sbjct: 17 WEEFKQRRD 25


>sp|Y365_METJA|UNCHARACTERIZED protein MJ0365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEDFKSLVD 9
WE +K LVD
Sbjct: 162 WELYKILVD 170




175|SequenceR|880|871|DPIFTWEDFK

>sp|Y868_THEGJ|UPF0200 protein TGAM_0868|Thermococcus gammatolerans (strain DSM 15229

Query: 5 TWEDFK 10
TWEDF+
Sbjct: 134 TWEDFE 139


>sp|Y1334_THEKO|UPF0200 protein TK1334|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 TWEDFK 10
TWEDF+
Sbjct: 134 TWEDFE 139


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 IFTWEDFK 10
+ +WEDF+
Sbjct: 197 VVSWEDFR 204


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DPIFTWEDFK 10
D F+WEDF+
Sbjct: 367 DASFSWEDFE 376


>sp|Y338_HYPBU|UPF0200 protein Hbut_0338|Hyperthermus butylicus (strain DSM 5456

Query: 1 DPIFTWEDFK 10
DP TWE+F+
Sbjct: 132 DPT-TWEEFR 140


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IFTWEDFK 10
+FT EDFK
Sbjct: 186 LFTTEDFK 193


>sp|ACDB1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 1 DPIFTWED 8
+PIF +ED
Sbjct: 214 NPIFAYED 221


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 PIFTWEDFK 10
PI TW+ +K
Sbjct: 484 PIITWKMYK 492


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 4 FTWEDF 9
F W+DF
Sbjct: 79 FNWQDF 84


>sp|DNPH1_THEPD|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Thermofilum pendens

Query: 5 TWEDFK 10
TWE+F+
Sbjct: 113 TWENFR 118


>sp|DHYS2_METMA|PROBABLE deoxyhypusine synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PIFTWE 7
P+F+W+
Sbjct: 329 PVFSWD 334


>sp|GLPK_HALWD|GLYCEROL kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DPIFTWEDFK 10
DPI WE+ K
Sbjct: 48 DPIEIWENTK 57


>sp|DPH2_METJA|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PIFTWEDFK 10
PI+T E+FK
Sbjct: 313 PIYTPEEFK 321


>sp|Y1344_THEON|UPF0200 protein TON_1344|Thermococcus onnurineus (strain NA1)

Query: 5 TWEDFK 10
+WEDF+
Sbjct: 134 SWEDFE 139


>sp|CPGS_THEKO|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus kodakarensis

Query: 1 DPIFTWED 8
+P+ T+ED
Sbjct: 79 EPVLTYED 86


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 DPIFTWEDFK 10
D ++ W+D K
Sbjct: 460 DYLYLWDDLK 469


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DPIFTWEDF 9
+P F WE +
Sbjct: 270 NPSFDWEQY 278


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 DPIFTWEDF 9
D FTWE+F
Sbjct: 374 DMSFTWEEF 382


>sp|Y21B_METJA|UNCHARACTERIZED protein MJ0210.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IFTWEDFK 10
+++W++FK
Sbjct: 128 LYSWKEFK 135


>sp|LEUC_HALMA|3-ISOPROPYLMALATE dehydratase large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 DPIFTW 6
DP+ TW
Sbjct: 287 DPVVTW 292


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DPIFTWEDF 9
+P F WE +
Sbjct: 270 NPSFDWEQY 278


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DPIFTWEDF 9
+P F WE +
Sbjct: 270 NPSFDWEQY 278


>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DPIFTWEDF 9
+P F WE +
Sbjct: 269 NPSFDWEQY 277


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 3 IFTWEDFK 10
+F WED +
Sbjct: 183 VFRWEDIE 190


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DPIFTWEDF 9
+P F WE +
Sbjct: 270 NPSFDWEQY 278


>sp|HIS1_ARCFU|ATP phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 3 IFTWEDFK 10
++T EDFK
Sbjct: 62 VYTIEDFK 69


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DPIFTWEDFK 10
D F+W+DF+
Sbjct: 361 DTDFSWDDFQ 370


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 DPIFTWEDFK 10
D F+W+DF+
Sbjct: 359 DTDFSWDDFQ 368


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 DPIFTWEDFK 10
D F+W+DF+
Sbjct: 359 DTDFSWDDFQ 368


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DPIFTWEDFK 10
D F+W+DF+
Sbjct: 359 DTDFSWDDFQ 368


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DPIFTWEDFK 10
D F+W+DF+
Sbjct: 362 DTDFSWDDFQ 371


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DPIFTWEDFK 10
D F+W+DF+
Sbjct: 359 DTDFSWDDFQ 368


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DPIFTWEDFK 10
D F+W+DF+
Sbjct: 361 DTDFSWDDFQ 370


>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 2 PIFTW 6
P+FTW
Sbjct: 191 PMFTW 195




176|SequenceR|885|876|SDMSSDPIFT

>sp|RRP4_THEPD|EXOSOME complex component Rrp4|Thermofilum pendens (strain DSM 2475

Query: 2 DMSSDPIFT 10
D+S DP+ T
Sbjct: 134 DLSKDPVLT 142


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 1 SDMSSDPIFT 10
+DM DP++T
Sbjct: 416 ADMIKDPLYT 425


>sp|CSX1_SACS2|CRISPR system endoribonuclease Csx1|Saccharolobus solfataricus (strain

Query: 2 DMSSDPIFT 10
D+S DP+ T
Sbjct: 246 DLSKDPLLT 254


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SDMSSDP 7
SD+S+DP
Sbjct: 332 SDLSADP 338




177|SequenceR|890|881|SQAFVSDMSS

>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 2 QAFVSDMSS 10
Q+FVSD++S
Sbjct: 557 QSFVSDLAS 565


>sp|Y1317_METJA|UNCHARACTERIZED MFS-type transporter MJ1317|Methanocaldococcus jannaschii (strain

Query: 2 QAFVSDMSS 10
+A+VSD+SS
Sbjct: 335 KAYVSDLSS 343




178|SequenceR|895|886|SDLDDSQAFV

>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SDLDDSQAFV 10
+ LDD+ AFV
Sbjct: 218 TQLDDALAFV 227


>sp|ARGJ_METVS|GLUTAMATE N-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LDDSQAFV 10
+DD++AFV
Sbjct: 86 MDDARAFV 93




179|SequenceR|900|891|GESGESDLDD

>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 ESGESDLDD 10
E+GE DLD+
Sbjct: 469 EAGEVDLDE 477


>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GESGESDLD 9
+ GE+DLD
Sbjct: 63 ADGGETDLD 71


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ESGESDLD 9
+ GE+DLD
Sbjct: 64 DGGETDLD 71


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ESGESDLD 9
+ GE+DLD
Sbjct: 64 DGGETDLD 71


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ESGESDLD 9
+ GESDLD
Sbjct: 66 DGGESDLD 73


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ESGESDLDD 10
E+GE DL+D
Sbjct: 562 EAGEYDLND 570


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ESGESDLD 9
+ GE+DLD
Sbjct: 66 DGGETDLD 73


>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 GESGESDLDD 10
GE G DLDD
Sbjct: 177 GEDGMIDLDD 186


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 SGESDLDD 10
SGE DL+D
Sbjct: 193 SGELDLED 200


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 SGESDLDD 10
SGE DL+D
Sbjct: 193 SGELDLED 200


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 SGESDLDD 10
SGE DL+D
Sbjct: 193 SGELDLED 200


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 SGESDLDD 10
SGE DL+D
Sbjct: 193 SGELDLED 200


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 SGESDLDD 10
SGE DL+D
Sbjct: 193 SGELDLED 200


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 SGESDLDD 10
SGE DL+D
Sbjct: 193 SGELDLED 200




180|SequenceR|905|896|KVLFSGESGE

>sp|Y327_METJA|UNCHARACTERIZED protein MJ0327|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVLFSGESGE 10
KV+F+ ESG+
Sbjct: 39 KVIFNDESGK 48


>sp|HTPX_THEAC|PROTEASE HtpX homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VLFSGESG 9
+LFSGE G
Sbjct: 176 LLFSGERG 183


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 1 KVLFSGESGE 10
KV+ GE GE
Sbjct: 110 KVVIEGEDGE 119


>sp|RRP42_PYRFU|EXOSOME complex component Rrp42|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KVLFSGESGE 10
KVL++ E+GE
Sbjct: 168 KVLYNEETGE 177


>sp|RL24_NATPD|LARGE ribosomal subunit protein uL24|Natronomonas pharaonis (strain

Query: 4 FSGESGE 10
F+GESGE
Sbjct: 56 FAGESGE 62


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 1 KVLFSGESGE 10
KV+ GE GE
Sbjct: 110 KVVIEGEDGE 119


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 1 KVLFSGESGE 10
KV+ GE GE
Sbjct: 110 KVVIEGEDGE 119


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 1 KVLFSGESGE 10
KV+ GE GE
Sbjct: 110 KVVIEGEDGE 119


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KVLFSGESGE 10
K+L + ESGE
Sbjct: 224 KILIAKESGE 233


>sp|WTPC_ARCFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Archaeoglobus fulgidus (strain ATCC

Query: 1 KVLFSGESGE 10
K LFS ++GE
Sbjct: 212 KELFSAKNGE 221


>sp|G1PDH_HALLT|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 LFSGESGE 10
L SGE+GE
Sbjct: 278 LHSGENGE 285




181|SequenceR|910|901|SNSKKKVLFS

>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 KKKVLFS 10
+KKVLFS
Sbjct: 373 RKKVLFS 379




182|SequenceR|915|906|EGVSISNSKK

>sp|RL24_HYPBU|LARGE ribosomal subunit protein uL24|Hyperthermus butylicus (strain DSM

Query: 1 EGVSISNSK 9
EGV+I+N++
Sbjct: 80 EGVTITNAR 88


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 1 EGVSISNSKK 10
E + ISNS+K
Sbjct: 419 EALEISNSRK 428


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 1 EGVSISNSK 9
EG+ +SN K
Sbjct: 221 EGIDLSNDK 229




183|SequenceR|920|911|ADRYFEGVSI

>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ADRYFEGV 8
ADRY EG+
Sbjct: 134 ADRYVEGI 141


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 ADRYFEGV 8
ADRY EG+
Sbjct: 134 ADRYVEGI 141


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 ADRYFEGV 8
ADRY EG+
Sbjct: 134 ADRYVEGI 141


>sp|PSB_METMS|PROTEASOME subunit beta|Methanohalophilus mahii (strain ATCC 35705

Query: 2 DRYFEGVSI 10
DRY EG+++
Sbjct: 151 DRYHEGINV 159


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ADRYFEG 7
ADRY EG
Sbjct: 134 ADRYVEG 140


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ADRYFEG 7
ADRY EG
Sbjct: 136 ADRYVEG 142


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DRYFEGV 8
DRY EG+
Sbjct: 137 DRYLEGI 143


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 DRYFEGV 8
DRY EGV
Sbjct: 147 DRYVEGV 153


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ADRYFEGVSI 10
AD Y++GV I
Sbjct: 288 ADLYYQGVDI 297


>sp|TRM56_PICTO|TRNA (cytidine(56)-2'-O)-methyltransferase|Picrophilus torridus (strain

Query: 2 DRYFEG 7
DRYF+G
Sbjct: 138 DRYFDG 143


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DRYFEGV 8
DRY EG+
Sbjct: 135 DRYVEGI 141


>sp|FAEHP_METBU|BIFUNCTIONAL enzyme Fae/Hps|Methanococcoides burtonii (strain DSM 6242

Query: 1 ADRYFEGVS 9
ADR+ EG++
Sbjct: 375 ADRFIEGLN 383


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 DRYFEGV 8
DRY EGV
Sbjct: 139 DRYVEGV 145


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ADRYFEG 7
ADRYF+
Sbjct: 403 ADRYFQA 409


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 DRYFEGV 8
DRY EG+
Sbjct: 137 DRYVEGI 143


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 DRYFEGV 8
DRY EG+
Sbjct: 137 DRYVEGI 143


>sp|TRM56_THEAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma acidophilum

Query: 2 DRYFEG 7
DRYF+G
Sbjct: 139 DRYFQG 144


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DRYFEGV 8
DRY EG+
Sbjct: 136 DRYVEGI 142


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DRYFEGVS 9
+RYF+G+S
Sbjct: 203 ERYFKGMS 210


>sp|CBIT_PYRCJ|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 ADRYFEG 7
ADRYF G
Sbjct: 111 ADRYFVG 117


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DRYFEGV 8
+RYF+GV
Sbjct: 413 NRYFDGV 419


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 DRYFEGV 8
+RYF+GV
Sbjct: 412 NRYFDGV 418


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 DRYFEGV 8
+RYF+GV
Sbjct: 413 NRYFDGV 419


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DRYFEGV 8
DRY EG+
Sbjct: 133 DRYVEGI 139


>sp|Y2093_ARCFU|UNCHARACTERIZED protein AF_2093|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ADRYFEG 7
DR+FEG
Sbjct: 115 TDRFFEG 121


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 RYFEGVSI 10
RYF+GV +
Sbjct: 87 RYFDGVGV 94


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DRYFEGV 8
+RYF+G+
Sbjct: 412 NRYFDGI 418


>sp|QUEE_THEAC|7-CARBOXY-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ADRYFEGVS 9
DRY EG+S
Sbjct: 159 VDRYGEGLS 167


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DRYFEGV 8
DRY EG+
Sbjct: 137 DRYVEGI 143


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ADRYFEGV 8
DRY EG+
Sbjct: 138 PDRYVEGI 145


>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 1 ADRYFEGVS 9
AD Y EGVS
Sbjct: 296 ADDYEEGVS 304


>sp|Y1514_METVS|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus vannielii

Query: 4 YFEGVSI 10
YFEGV++
Sbjct: 188 YFEGVNL 194


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ADRYFEGVSI 10
A+R EG+S+
Sbjct: 675 AERVVEGISV 684


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DRYFEGV 8
+RYF+G+
Sbjct: 412 NRYFDGI 418


>sp|FBP_PYRFU|FRUCTOSE-1,6-BISPHOSPHATASE furiosus (strain ATCC 43587

Query: 1 ADRYFEGV 8
+R+FEG+
Sbjct: 121 TERFFEGI 128




184|SequenceR|925|916|CRQLVADRYF

>sp|GGGPS_METMJ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 VADRYF 10
VADRYF
Sbjct: 150 VADRYF 155


>sp|GGGPS_METB6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoregula boonei (strain DSM 21154

Query: 5 VADRYF 10
VADRYF
Sbjct: 148 VADRYF 153


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CRQLVADRY 9
C + +ADRY
Sbjct: 131 CDKFLADRY 139


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CRQLVADRY 9
C++ + DRY
Sbjct: 129 CKKFLPDRY 137


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 CRQLVADRY 9
C++ + DRY
Sbjct: 131 CKRFLPDRY 139


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 QLVADRYF 10
Q +ADRY+
Sbjct: 70 QEIADRYY 77


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 CRQLVADRY 9
C++ + DRY
Sbjct: 131 CKRFLPDRY 139


>sp|RS4E_DESA1|SMALL ribosomal subunit protein eS4|Desulfurococcus amylolyticus

Query: 2 RQLVADRYF 10
R+L+A+ YF
Sbjct: 63 RRLIAEGYF 71


>sp|RPO10_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermococcus kodakarensis (strain

Query: 1 CRQLVADRYF 10
C +++AD+Y+
Sbjct: 10 CGKVLADKYY 19




185|SequenceR|930|921|QLNPSCRQLV

>sp|RL2_METMA|LARGE ribosomal subunit protein uL2|Methanosarcina mazei (strain ATCC

Query: 2 LNPSCRQLV 10
LNP CR +V
Sbjct: 149 LNPKCRAVV 157


>sp|RL2_METBF|LARGE ribosomal subunit protein uL2|Methanosarcina barkeri (strain Fusaro

Query: 2 LNPSCRQLV 10
LNP CR +V
Sbjct: 149 LNPKCRAVV 157


>sp|RL2_METAC|LARGE ribosomal subunit protein uL2|Methanosarcina acetivorans (strain

Query: 2 LNPSCRQLV 10
LNP CR +V
Sbjct: 149 LNPKCRAVV 157


>sp|RL2_METMP|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain DSM

Query: 2 LNPSCRQLV 10
LNP+CR V
Sbjct: 152 LNPACRATV 160


>sp|RL2_METM7|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain C7

Query: 2 LNPSCRQLV 10
LNP+CR V
Sbjct: 152 LNPACRATV 160


>sp|RL2_METM6|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain C6

Query: 2 LNPSCRQLV 10
LNP+CR V
Sbjct: 152 LNPACRATV 160


>sp|RL2_METM5|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain C5

Query: 2 LNPSCRQLV 10
LNP+CR V
Sbjct: 152 LNPACRATV 160


>sp|RL2_METVS|LARGE ribosomal subunit protein uL2|Methanococcus vannielii (strain ATCC

Query: 2 LNPSCRQLV 10
LNP+CR +
Sbjct: 152 LNPACRATI 160


>sp|RL2_METVA|LARGE ribosomal subunit protein uL2|Methanococcus vannielii

Query: 2 LNPSCRQLV 10
LNP+CR +
Sbjct: 152 LNPACRATI 160


>sp|RL2_METTH|LARGE ribosomal subunit protein uL2|Methanothermobacter

Query: 2 LNPSCRQLV 10
LNP CR V
Sbjct: 152 LNPQCRATV 160


>sp|RL2_METAR|LARGE ribosomal subunit protein uL2|Methanocella arvoryzae (strain DSM

Query: 1 QLNPSCRQLV 10
+LNP CR +
Sbjct: 148 RLNPKCRATI 157


>sp|RL2_THEON|LARGE ribosomal subunit protein uL2|Thermococcus onnurineus (strain NA1)

Query: 1 QLNPSCRQLV 10
Q NP CR +
Sbjct: 150 QFNPMCRATI 159


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 2 LNPSCR 7
LNP+CR
Sbjct: 508 LNPTCR 513


>sp|Y120_METJA|UNCHARACTERIZED protein MJ0120|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLNPSCR 7
++NP+CR
Sbjct: 155 EMNPNCR 161


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QLNPSCRQL 9
++NPSC+ L
Sbjct: 167 RMNPSCQVL 175


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 1 QLNPSCRQL 9
++NPSC+ L
Sbjct: 167 KMNPSCQIL 175


>sp|RL2_METS3|LARGE ribosomal subunit protein uL2|Methanobrevibacter smithii (strain

Query: 2 LNPSCR 7
LNP CR
Sbjct: 152 LNPRCR 157


>sp|RL2_META3|LARGE ribosomal subunit protein uL2|Methanococcus aeolicus (strain ATCC

Query: 2 LNPSCRQLV 10
LNP CR +
Sbjct: 152 LNPMCRATI 160


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 NPSCRQLV 10
NP+CR +
Sbjct: 621 NPNCRDTI 628




186|SequenceR|935|926|SNSHRQLNPS

>sp|Y1188_METJA|UNCHARACTERIZED protein MJ1188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NSHRQLNPS 10
N H +LNPS
Sbjct: 66 NPHIELNPS 74


>sp|Y1414_METJA|UNCHARACTERIZED protein MJ1414|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NSHRQLNP 9
N+ +QLNP
Sbjct: 157 NAEKQLNP 164


>sp|CAS1B_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HRQLNPS 10
H QLNP+
Sbjct: 203 HTQLNPA 209




187|SequenceR|940|931|FIPGLSNSHR

>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 2 IPGLSNSH 9
+PGLSN+H
Sbjct: 65 LPGLSNTH 72


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IPGLSNSH 9
+PGL NSH
Sbjct: 50 VPGLVNSH 57


>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FIPGLSNSH 9
IPGL N+H
Sbjct: 49 LIPGLVNTH 57


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 1 FIPGLSNSH 9
IPGL N+H
Sbjct: 49 LIPGLVNTH 57


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 1 FIPGLSNSH 9
IPGL N+H
Sbjct: 49 LIPGLVNTH 57


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FIPGLSNSH 9
IPGL N+H
Sbjct: 54 LIPGLVNTH 62


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 2 IPGLSNSHR 10
IPG++N H+
Sbjct: 99 IPGMANMHK 107


>sp|DADD_METAC|5'-DEOXYADENOSINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IPGLSNSH 9
+PGL+N+H
Sbjct: 56 MPGLANTH 63


>sp|MTAD_HALMA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IPGLSNSH 9
IPGL N+H
Sbjct: 55 IPGLVNAH 62


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FIPGLSNSH 9
IPGL N+H
Sbjct: 49 LIPGLINTH 57


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 1 FIPGLSNSH 9
IPGL N+H
Sbjct: 49 LIPGLINTH 57


>sp|DADD_METJA|5'-DEOXYADENOSINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IPGLSNSH 9
IPGL N+H
Sbjct: 48 IPGLINTH 55


>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IPGLSNSH 9
IPGL N+H
Sbjct: 51 IPGLINAH 58


>sp|DADD_META3|5'-DEOXYADENOSINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IPGLSNSH 9
IPGL N+H
Sbjct: 52 IPGLVNTH 59


>sp|MTAD_NATPD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IPGLSNSH 9
+PGL N+H
Sbjct: 53 VPGLVNTH 60


>sp|HUTI_THEVO|IMIDAZOLONEPROPIONASE volcanium (strain ATCC 51530

Query: 2 IPGLSNSH 9
IPGL +SH
Sbjct: 63 IPGLVDSH 70


>sp|DADD_METST|5'-DEOXYADENOSINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IPGLSNSH 9
+PGL N+H
Sbjct: 55 MPGLVNTH 62


>sp|DADD_METMA|5'-DEOXYADENOSINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IPGLSNSH 9
+PGL N+H
Sbjct: 56 MPGLVNTH 63


>sp|DADD_METBF|5'-DEOXYADENOSINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IPGLSNSH 9
+PGL N+H
Sbjct: 56 MPGLVNTH 63


>sp|MTAD_HALWD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IPGLSNSH 9
+PGL N+H
Sbjct: 67 MPGLVNAH 74


>sp|MTAD_HALSA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Halobacterium salinarum (strain ATCC 700922

Query: 2 IPGLSNSH 9
+PGL N+H
Sbjct: 54 MPGLVNAH 61


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 IPGLSNSH 9
+PGL N+H
Sbjct: 58 MPGLINTH 65


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IPGLSNSH 9
+PGL N+H
Sbjct: 72 MPGLINTH 79


>sp|RIFK_METLZ|RIBOFLAVIN kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 IPGLSNSHR 10
+PG + HR
Sbjct: 157 VPGFKDEHR 165


>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IPGLSNSH 9
IPG N+H
Sbjct: 49 IPGFFNTH 56


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 PGLSNSH 9
PGL++SH
Sbjct: 264 PGLTSSH 270


>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 3 PGLSNSH 9
PGL++SH
Sbjct: 265 PGLTSSH 271




188|SequenceR|945|936|LDEHDFIPGL

>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDEHDFIP 8
LDE DFIP
Sbjct: 128 LDETDFIP 135


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 3 EHDFIPGL 10
E DF+PGL
Sbjct: 210 EKDFLPGL 217


>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDEHDFIPGL 10
L+E+DF+P L
Sbjct: 160 LEENDFLPDL 169


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 1 LDEHDFI 7
LDEHD++
Sbjct: 169 LDEHDYV 175


>sp|BIOU_HALMT|(S)-8-AMINO-7-OXONONANOATE synthase BioU|Haloferax mediterranei (strain ATCC 33500

Query: 3 EHDFIP 8
EHDFIP
Sbjct: 122 EHDFIP 127


>sp|CDC61_AERPE|ORC1-TYPE DNA replication protein 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LDEHDFIP 8
LDE DF+P
Sbjct: 144 LDEIDFLP 151


>sp|RL5_METTH|LARGE ribosomal subunit protein uL5|Methanothermobacter

Query: 1 LDEHDFIPGL 10
+DEH IPG+
Sbjct: 101 IDEHIDIPGM 110


>sp|HEM3_THEVO|PROBABLE porphobilinogen deaminase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LDEHDFIPG 9
LDE+ F+P
Sbjct: 179 LDENKFVPA 187


>sp|RL5_AERPE|LARGE ribosomal subunit protein uL5|Aeropyrum pernix (strain ATCC 700893

Query: 1 LDEHDFIPGL 10
++EH IPG+
Sbjct: 124 IEEHILIPGV 133


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 3 EHDFIPG 9
E DF+PG
Sbjct: 262 ERDFLPG 268


>sp|RL5_PYRAB|LARGE ribosomal subunit protein uL5|Pyrococcus abyssi (strain GE5 /

Query: 1 LDEHDFIPGL 10
+DEH IPG+
Sbjct: 117 IDEHINIPGV 126


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 EHDFIPGL 10
E+DF+P L
Sbjct: 166 ENDFVPSL 173


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HDFIP 8
HDFIP
Sbjct: 327 HDFIP 331


>sp|RL15E_SACS2|LARGE ribosomal subunit protein eL15|Saccharolobus solfataricus (strain

Query: 1 LDEHDFIPG 9
L E+D IPG
Sbjct: 207 LQEYDKIPG 215


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LDEHDFI 7
L+EHDF+
Sbjct: 269 LEEHDFV 275


>sp|RPO5_METVS|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus vannielii (strain ATCC

Query: 3 EHDFIPG 9
EH+ IPG
Sbjct: 11 EHEIIPG 17


>sp|DNAG_IGNH4|DNA primase DnaG|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LDEHDFI 7
+DEHD I
Sbjct: 16 VDEHDII 22


>sp|APGM_METPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 1 LDEHDFI 7
LD HDF+
Sbjct: 293 LDTHDFV 299


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 LDEHDFIPGL 10
L+E F PG+
Sbjct: 244 LEEQKFFPGI 253


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 4 HDFIP 8
HDF+P
Sbjct: 324 HDFVP 328




189|SequenceR|950|941|RKRKLLDEHD

>sp|Y094_METJA|UNCHARACTERIZED protein MJ0094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKRKLLDEHD 10
++R+L++EHD
Sbjct: 126 KERRLIEEHD 135


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 2 KRKLLDEHD 10
++ +LDEHD
Sbjct: 102 EQGVLDEHD 110


>sp|MPTA_METLZ|GTP cyclohydrolase MptA|Methanocorpusculum labreanum (strain ATCC

Query: 3 RKLLDEHD 10
RKLLD H+
Sbjct: 92 RKLLDHHE 99


>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RKRKLLDE 8
RKRK LDE
Sbjct: 453 RKRKGLDE 460


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 1 RKRKLLDEH 9
R +++LDEH
Sbjct: 229 RVKRILDEH 237


>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKRKLLDEH 9
RK KL++EH
Sbjct: 201 RKWKLINEH 209


>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 3 RKLLDEHD 10
RKLLD H+
Sbjct: 101 RKLLDRHE 108


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 RKRKLLDEH 9
+ RKL DEH
Sbjct: 50 KARKLADEH 58


>sp|HFLX_METJA|GTPASE HflX|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKRKLLDEHD 10
+KRK+L+E D
Sbjct: 309 KKRKILEELD 318


>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 2 KRKLLDEH 9
++KLLDE+
Sbjct: 334 RKKLLDEY 341


>sp|TRPD_METBU|ANTHRANILATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 3 RKLLDEHD 10
+KL+D HD
Sbjct: 6 QKLIDGHD 13


>sp|Y689_ARCFU|UNCHARACTERIZED protein AF_0689|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RKRKLLDE 8
+KRKLLD+
Sbjct: 182 KKRKLLDQ 189




190|SequenceR|955|946|SSLIKRKRKL

***** No hits found ******


191|SequenceR|960|951|RLSDDSSLIK

>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 RLSDDSSLI 9
R+SDD +LI
Sbjct: 182 RISDDDALI 190


>sp|SELD_METJA|SELENIDE, water dikinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LSDDSSLIK 10
L DD+S+IK
Sbjct: 50 LGDDASIIK 58


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 RLSDDSSLI 9
RLSD+S LI
Sbjct: 485 RLSDNSFLI 493




192|SequenceR|965|956|QLKSSRLSDD

***** No hits found ******


193|SequenceR|970|961|HRMHSQLKSS

>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 2 RMHSQLKSS 10
R+H QLKSS
Sbjct: 212 RLHLQLKSS 220


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HRMHSQLK 8
H++HS LK
Sbjct: 738 HKVHSDLK 745




194|SequenceR|975|966|SISDSHRMHS

***** No hits found ******


195|SequenceR|980|971|ESALSSISDS

***** No hits found ******


196|SequenceR|985|976|TIYERESALS

>sp|PYRF_PYRFU|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IYERESALS 10
+YERE ALS
Sbjct: 8 VYEREKALS 16


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 TIYERESALS 10
T+YERES ++
Sbjct: 452 TLYERESYMT 461


>sp|NTPTH_THEPD|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermofilum pendens (strain DSM 2475

Query: 1 TIYERESA 8
TI+ERES+
Sbjct: 135 TIHERESS 142




197|SequenceR|990|981|SLDLSTIYER

>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 3 DLSTIYER 10
DLSTIYER
Sbjct: 284 DLSTIYER 291


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DLSTIYER 10
DLSTIYER
Sbjct: 281 DLSTIYER 288


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 3 DLSTIYER 10
DLSTIYER
Sbjct: 284 DLSTIYER 291


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DLSTIYER 10
DLSTIYER
Sbjct: 281 DLSTIYER 288


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 3 DLSTIYER 10
DLSTIYER
Sbjct: 281 DLSTIYER 288


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 283 DLATIYER 290


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 283 DLATIYER 290


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 284 DLATIYER 291


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 283 DLATIYER 290


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 283 DLATIYER 290


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 285 DLATIYER 292


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 282 DLATIYER 289


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 282 DLATIYER 289


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 282 DLATIYER 289


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 282 DLATIYER 289


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 282 DLATIYER 289


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 282 DLATIYER 289


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 282 DLATIYER 289


>sp|AATB_THEPD|A-TYPE ATP synthase subunit B|Thermofilum pendens (strain DSM 2475

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 281 DLATIYER 288


>sp|AATB_STAMF|A-TYPE ATP synthase subunit B|Staphylothermus marinus (strain ATCC 43588

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 286 DLATIYER 293


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 283 DLATIYER 290


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 280 DLATIYER 287


>sp|AATB_IGNH4|A-TYPE ATP synthase subunit B|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 286 DLATIYER 293


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 286 DLATIYER 293


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 804 DLATIYER 811


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 278 DLATIYER 285


>sp|AATB_METTL|A-TYPE ATP synthase subunit B|Methanothermococcus thermolithotrophicus

Query: 3 DLSTIYER 10
DL+T+YER
Sbjct: 217 DLATLYER 224


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 280 DLATIYER 287


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 281 DLATIYER 288


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 281 DLATIYER 288


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 283 DLATIYER 290


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM 15229

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 281 DLATIYER 288


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 3 DLSTIYER 10
DL+TIYER
Sbjct: 283 DLATIYER 290


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DLSTIYER 10
DL+T+YER
Sbjct: 279 DLATLYER 286


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 3 DLSTIYER 10
DL+T+YER
Sbjct: 279 DLATLYER 286


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 3 DLSTIYER 10
DL+T+YER
Sbjct: 279 DLATLYER 286


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 3 DLSTIYER 10
DL+T+YER
Sbjct: 279 DLATLYER 286


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DLSTIYER 10
DL+T+YER
Sbjct: 285 DLATLYER 292


>sp|AATB_METLZ|A-TYPE ATP synthase subunit B|Methanocorpusculum labreanum (strain ATCC

Query: 3 DLSTIYER 10
DL++IYER
Sbjct: 278 DLASIYER 285


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DLSTIYER 10
DL+T+YER
Sbjct: 287 DLATLYER 294


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 3 DLSTIYER 10
DL++IYER
Sbjct: 288 DLASIYER 295


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 DLSTIYER 10
DL++IYER
Sbjct: 278 DLASIYER 285


>sp|AATB_AERPE|A-TYPE ATP synthase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 3 DLSTIYER 10
DL++IYER
Sbjct: 283 DLASIYER 290


>sp|AATB_METB6|A-TYPE ATP synthase subunit B|Methanoregula boonei (strain DSM 21154

Query: 3 DLSTIYER 10
DL+ IYER
Sbjct: 278 DLACIYER 285


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 3 DLSTIYER 10
DL+ IYER
Sbjct: 285 DLANIYER 292


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DLSTIYE 9
DL+TIYE
Sbjct: 283 DLATIYE 289


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 3 DLSTIYER 10
DL+++YER
Sbjct: 285 DLASLYER 292


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DLSTIYER 10
DL+++YER
Sbjct: 278 DLASLYER 285


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 3 DLSTIYER 10
DL+++YER
Sbjct: 278 DLASLYER 285


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 3 DLSTIYER 10
DL+++YER
Sbjct: 279 DLASLYER 286


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 1 SLDLSTIYER 10
+LD+ IYER
Sbjct: 200 NLDVPGIYER 209


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 3 DLSTIYER 10
DL+++YER
Sbjct: 285 DLASLYER 292


>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DLSTIYER 10
DL+++YER
Sbjct: 284 DLASLYER 291


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 SLDLSTIYE 9
S+DL++IY+
Sbjct: 586 SMDLNSIYD 594


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 2 LDLSTIYER 10
LDL+ ++ER
Sbjct: 310 LDLADVFER 318


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 3 DLSTIYER 10
DL+T YER
Sbjct: 279 DLATNYER 286


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SLDLSTIYER 10
SLDLS Y R
Sbjct: 470 SLDLSEKYRR 479




198|SequenceR|995|986|RLENASLDLS

>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 1 RLENASLDL 9
RL+N +LDL
Sbjct: 117 RLDNRTLDL 125


>sp|DOXD_ACIAM|THIOSULFATE dehydrogenase [quinone] large subunit|Acidianus ambivalens

Query: 2 LENASLDLS 10
LEN SLD++
Sbjct: 77 LENRSLDVT 85


>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLENASLDL 9
RLEN LDL
Sbjct: 126 RLENRFLDL 134


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RLENASLDL 9
RL+N +LDL
Sbjct: 117 RLDNRTLDL 125


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RLENASLDL 9
RL+N +LDL
Sbjct: 117 RLDNRTLDL 125


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RLENASLDL 9
RL+N +LDL
Sbjct: 117 RLDNRTLDL 125


>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain ATCC

Query: 1 RLENASLDL 9
RLE A LD+
Sbjct: 167 RLEKAGLDM 175


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 1 RLENASLDL 9
RLE A LD+
Sbjct: 167 RLEKAGLDM 175




199|SequenceR|1000|991|LADIDRLENA

>sp|SPH2_HALSA|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LADIDRLEN 9
LA++DRLEN
Sbjct: 476 LAELDRLEN 484


>sp|SPH2_HALS3|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 29341

Query: 1 LADIDRLEN 9
LA++DRLEN
Sbjct: 476 LAELDRLEN 484


>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 ADIDRLENA 10
AD+DR+E A
Sbjct: 355 ADVDRVEEA 363


>sp|DPM1L_HALVD|DOLICHYL-PHOSPHATE hexose transferase HVO_1613|Haloferax volcanii (strain ATCC 29605

Query: 1 LADIDRLENA 10
LADIDR+ +
Sbjct: 26 LADIDRITDG 35


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 3 DIDRLEN 9
D+DRLE+
Sbjct: 111 DVDRLED 117


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 3 DIDRLENA 10
+IDR++NA
Sbjct: 316 EIDRIKNA 323


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 3 DIDRLENA 10
+IDR++NA
Sbjct: 316 EIDRIKNA 323


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 3 DIDRLENA 10
+IDR++NA
Sbjct: 316 EIDRIKNA 323




200|SequenceR|1005|996|CCKQSLADID

>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 3 KQSLADID 10
KQS+ADID
Sbjct: 471 KQSIADID 478


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KQSLADID 10
KQS+ADI+
Sbjct: 471 KQSIADIE 478


>sp|SYDND_METST|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 CKQSLADID 10
C++ L+D+D
Sbjct: 268 CQKELSDLD 276


>sp|SYH_METJA|HISTIDINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CKQSLADID 10
CK+ LAD +
Sbjct: 132 CKEPLADAE 140


>sp|TRKA_METJA|TRK system potassium uptake protein|Methanocaldococcus jannaschii

Query: 2 CKQSLADID 10
CK++ A+ID
Sbjct: 36 CKKASAEID 44




201|SequenceR|1010|1001|LHVSICCKQS

>sp|Y3539_METJA|UPF0252 protein MJECL39|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LHVSICC 7
+H+ ICC
Sbjct: 89 IHIIICC 95




202|SequenceR|1015|1006|KELHELHVSI

>sp|THIM_METAR|HYDROXYETHYLTHIAZOLE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 LHELHVSI 10
LH+LHVS+
Sbjct: 112 LHKLHVSV 119


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 1 KELHELHVSI 10
KE+ E+HV++
Sbjct: 339 KEMQEIHVNL 348


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 1 KELHELHVS 9
KE+HEL +S
Sbjct: 198 KEIHELSLS 206


>sp|NNRD_CENSY|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Cenarchaeum symbiosum (strain A)

Query: 1 KELHELHVS 9
+E+H LH++
Sbjct: 260 QEMHGLHIT 268


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KELHELHV 8
K LHE+HV
Sbjct: 241 KGLHEVHV 248


>sp|RRP41_SACS2|EXOSOME complex component Rrp41|Saccharolobus solfataricus (strain ATCC

Query: 1 KELHELHVSI 10
KE+H H+S+
Sbjct: 62 KEMHPRHLSL 71


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 LHELHV 8
LH+LHV
Sbjct: 85 LHDLHV 90


>sp|CAR_HALS3|TRANSDUCER protein Car|Halobacterium salinarum (strain ATCC 29341

Query: 1 KELHELHVSI 10
+ELH+LH ++
Sbjct: 164 RELHDLHETV 173


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 1 KELHELHVSI 10
KELHE ++ I
Sbjct: 372 KELHEKNIPI 381


>sp|PFDB_PYRAR|PREFOLDIN subunit beta|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KELHELHV 8
KEL ELHV
Sbjct: 79 KELLELHV 86




203|SequenceR|1020|1011|QHLELKELHE

>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 1 QHLELKELHE 10
+H LKE+HE
Sbjct: 258 EHFMLKEIHE 267


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 1 QHLELKELHE 10
+H LKE+HE
Sbjct: 258 EHFMLKEIHE 267


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 2 HLELKELHE 10
H LKE+HE
Sbjct: 251 HFMLKEIHE 259


>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain ATCC

Query: 2 HLELKELHE 10
H LKE+HE
Sbjct: 246 HYMLKEIHE 254


>sp|RS9_PYRAE|SMALL ribosomal subunit protein uS9|Pyrobaculum aerophilum (strain ATCC

Query: 1 QHLELKELHE 10
Q ELKEL+E
Sbjct: 100 QSQELKELYE 109


>sp|GLMS_SULAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfolobus acidocaldarius (strain

Query: 2 HLELKELHE 10
H +KE+HE
Sbjct: 256 HFMIKEIHE 264


>sp|BIOW_METM7|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 QHLELKELH 9
+HLE+K +H
Sbjct: 64 KHLEIKTVH 72


>sp|GLMS_SULTO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfurisphaera tokodaii (strain DSM

Query: 2 HLELKELHE 10
H +KE+HE
Sbjct: 256 HFMIKEIHE 264


>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 3 LELKELHE 10
+E+KELH+
Sbjct: 316 MEVKELHD 323


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LELKELHE 10
+ELK +HE
Sbjct: 522 IELKAMHE 529


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 2 HLELKELHE 10
H LKE+HE
Sbjct: 259 HFMLKEIHE 267


>sp|BIOW_METM6|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 QHLELKELH 9
+HLE+K +H
Sbjct: 64 KHLEIKTVH 72




204|SequenceR|1025|1016|STLANQHLEL

***** No hits found ******


205|SequenceR|1030|1021|LQQPFSTLAN

>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LQQPFSTLA 9
L+ PF TLA
Sbjct: 515 LESPFMTLA 523


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LQQPFSTLA 9
L+ PF TLA
Sbjct: 513 LESPFMTLA 521


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 4 PFSTLA 9
PFSTLA
Sbjct: 308 PFSTLA 313


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 4 PFSTLA 9
PFSTLA
Sbjct: 601 PFSTLA 606


>sp|RS4_NANEQ|SMALL ribosomal subunit protein uS4|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 PFSTLAN 10
PFS LAN
Sbjct: 155 PFSPLAN 161




206|SequenceR|1035|1026|KLTECLQQPF

>sp|URED_HALWD|UREASE accessory protein UreD|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LTECLQQP 9
+T CLQ P
Sbjct: 75 ITVCLQDP 82


>sp|DPHB_PYRIL|DIPHTHINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KLTECLQQ 8
K+ ECLQ+
Sbjct: 65 KIFECLQE 72




207|SequenceR|1040|1031|LHTLSKLTEC

>sp|RS8_CENSY|SMALL ribosomal subunit protein uS8|Cenarchaeum symbiosum (strain A)

Query: 1 LHTLSKLTEC 10
+H L+K+T+C
Sbjct: 63 VHLLAKITKC 72


>sp|ARSR_HALSA|PUTATIVE arsenical resistance operon repressor|Halobacterium salinarum

Query: 2 HTLSKLTE 9
H+LS+LTE
Sbjct: 89 HSLSQLTE 96


>sp|PRIS_NITMS|DNA primase small subunit PriS|Nitrosopumilus maritimus (strain SCM1)

Query: 2 HTLSKLTEC 10
HTLS EC
Sbjct: 109 HTLSICNEC 117




208|SequenceR|1045|1036|NSHLDLHTLS

>sp|TPIS_METTH|TRIOSEPHOSPHATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 HLDLHTLS 10
H+DLH +S
Sbjct: 52 HMDLHRVS 59


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 HLDLHTL 9
H+DLH L
Sbjct: 438 HIDLHKL 444


>sp|SUI1_METMA|PROTEIN translation factor SUI1 homolog|Methanosarcina mazei (strain ATCC

Query: 2 SHLDLHTLS 10
S +DLH LS
Sbjct: 50 SEIDLHELS 58


>sp|SUI1_METBF|PROTEIN translation factor SUI1 homolog|Methanosarcina barkeri (strain

Query: 2 SHLDLHTLS 10
S +DLH LS
Sbjct: 50 SEIDLHELS 58


>sp|SUI1_METAC|PROTEIN translation factor SUI1 homolog|Methanosarcina acetivorans

Query: 2 SHLDLHTLS 10
S +DLH LS
Sbjct: 50 SEIDLHELS 58


>sp|ARGDC_AERPE|ARGININE decarboxylase proenzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 SHLDLHT 8
SHL LHT
Sbjct: 70 SHLALHT 76


>sp|END4_METPE|PROBABLE endonuclease 4|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 SHLDLHT 8
SHLD HT
Sbjct: 227 SHLDRHT 233


>sp|RS7_PICTO|SMALL ribosomal subunit protein uS7|Picrophilus torridus (strain ATCC

Query: 1 NSHLDLHT 8
NS+ +LHT
Sbjct: 28 NSYFNLHT 35


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 3 HLDLHTLS 10
H D HTL+
Sbjct: 319 HYDTHTLA 326


>sp|GFO6_HALMA|D-XYLOSE 1-dehydrogenase [NADP(+)]|Haloarcula marismortui (strain ATCC 43049

Query: 1 NSHLDLH 7
N+HLD H
Sbjct: 264 NAHLDSH 270


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 2 SHLDLHTL 9
S+LDLH L
Sbjct: 307 SYLDLHQL 314




209|SequenceR|1050|1041|FSTFKNSHLD

>sp|CHED1_METAC|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina acetivorans

Query: 2 STFKNSHLD 10
S F+NSH++
Sbjct: 97 SMFENSHMN 105


>sp|RS11_AERPE|SMALL ribosomal subunit protein uS11|Aeropyrum pernix (strain ATCC

Query: 1 FSTFKNSHL 9
+S+F N+H+
Sbjct: 16 YSSFNNTHV 24


>sp|PGK_PICTO|PHOSPHOGLYCERATE kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 FSTFKNSHL 9
F T KN+H+
Sbjct: 129 FETIKNTHI 137


>sp|AROD_METVS|3-DEHYDROQUINATE dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FSTFKNSHLD 10
F+TF NS D
Sbjct: 143 FATFSNSKKD 152


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 KNSHLD 10
KNSH+D
Sbjct: 182 KNSHID 187


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 3 TFKNSHLD 10
TF+N+H++
Sbjct: 119 TFENTHVE 126




210|SequenceR|1055|1046|LLYSPFSTFK

>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 LLYSPFSTFK 10
LL +P+ TF+
Sbjct: 16 LLKNPYETFR 25


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LLYSPFSTFK 10
+L+ P S+FK
Sbjct: 179 ILFIPMSSFK 188


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain

Query: 1 LLYSPFSTF 9
+L+SP+S F
Sbjct: 76 VLFSPYSIF 84




211|SequenceR|1060|1051|ICSMKLLYSP

>sp|Y906_METJA|UNCHARACTERIZED protein MJ0906|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ICSMKLLYSP 10
ICS ++Y+P
Sbjct: 274 ICSHTMIYAP 283


>sp|RPO12_THEON|DNA-DIRECTED RNA polymerase subunit Rpo12|Thermococcus onnurineus (strain NA1)

Query: 2 CSMKLLYSP 10
C K+LY P
Sbjct: 30 CGSKILYKP 38


>sp|RPO12_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrococcus abyssi (strain GE5 /

Query: 2 CSMKLLYSP 10
C K+LY P
Sbjct: 30 CGSKILYKP 38


>sp|RPO12_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrococcus furiosus (strain ATCC

Query: 2 CSMKLLYSP 10
C K+LY P
Sbjct: 30 CGSKILYKP 38


>sp|RPO12_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrococcus horikoshii (strain ATCC

Query: 2 CSMKLLYSP 10
C K+LY P
Sbjct: 30 CGSKILYKP 38




212|SequenceR|1065|1056|VDLNAICSMK

>sp|KPTA_METAC|PROBABLE RNA 2'-phosphotransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 VDLNAICSM 9
VDLNA C +
Sbjct: 60 VDLNAFCDV 68


>sp|KPTA_METMA|PROBABLE RNA 2'-phosphotransferase|Methanosarcina mazei (strain ATCC

Query: 1 VDLNAICSM 9
+DLNA C +
Sbjct: 60 IDLNAFCEV 68


>sp|GATD_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcoides burtonii (strain DSM

Query: 3 LNAICSMK 10
+NAIC+ K
Sbjct: 199 MNAICATK 206




213|SequenceR|1070|1061|IDNRSVDLNA

>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IDNRSVDL 8
IDNR +D+
Sbjct: 105 IDNRQIDM 112


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IDNRSVDLNA 10
+DNR++DL +
Sbjct: 118 LDNRTLDLRS 127


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IDNRSVDL 8
+DNR++DL
Sbjct: 118 LDNRTLDL 125


>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 1 IDNRSVDL 8
+DNR++DL
Sbjct: 118 LDNRTLDL 125


>sp|AROB_PICTO|3-DEHYDROQUINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 IDNRSVDLN 9
ID RSVD+N
Sbjct: 284 IDFRSVDIN 292


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IDNRSVDL 8
+DNR++DL
Sbjct: 118 LDNRTLDL 125


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IDNRSVDL 8
+DNR +DL
Sbjct: 121 LDNRFIDL 128


>sp|TRM1_HALSA|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 1 IDNRSVDLNA 10
+D+R+ D NA
Sbjct: 218 LDHRATDANA 227


>sp|TRM1_HALS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 1 IDNRSVDLNA 10
+D+R+ D NA
Sbjct: 218 LDHRATDANA 227


>sp|PYRI_THEVO|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma volcanium

Query: 1 IDNRSVDLN 9
I+NRS+D N
Sbjct: 61 IENRSLDKN 69


>sp|GATD_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanobrevibacter smithii (strain ATCC

Query: 1 IDNRSVDLN 9
I+N SVD+N
Sbjct: 274 IENHSVDIN 282




214|SequenceR|1075|1066|VVSPGIDNRS

>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 1 VVSPGIDN 8
+V+PGID+
Sbjct: 310 IVAPGIDD 317


>sp|GPT_SULAC|PUTATIVE UDP-N-acetylglucosamine--dolichyl-phosphate

Query: 2 VSPGIDN 8
+SPGI+N
Sbjct: 74 LSPGIEN 80


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VSPGID 7
+SPGID
Sbjct: 224 ISPGID 229


>sp|UPP_SULAC|URACIL phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 VSPGIDNR 9
V P IDNR
Sbjct: 193 VDPEIDNR 200


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 2 VSPGIDNR 9
+SP IDN+
Sbjct: 190 ISPDIDNQ 197


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 2 VSPGIDNR 9
+SP IDN+
Sbjct: 193 ISPDIDNQ 200




215|SequenceR|1080|1071|VTPDLVVSPG

>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 VTPDLVVSP 9
V PDL+V+P
Sbjct: 390 VVPDLIVNP 398


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 VTPDLVVS 8
VTPDL+VS
Sbjct: 286 VTPDLIVS 293


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 VTPDLVVSP 9
+ PDL+V+P
Sbjct: 389 IVPDLIVNP 397


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 1 VTPDLVVSP 9
V PDL+++P
Sbjct: 390 VIPDLIINP 398


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 VTPDLVVSP 9
+ PDL+V+P
Sbjct: 907 IVPDLIVNP 915


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 1 VTPDLVVSP 9
+ PDL+++P
Sbjct: 389 IVPDLIINP 397


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 VTPDLVVSP 9
V PDLV++P
Sbjct: 393 VVPDLVLNP 401


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 VTPDLVVSP 9
V PDLV++P
Sbjct: 393 VVPDLVLNP 401


>sp|Y414_METJA|UNCHARACTERIZED protein MJ0414|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PDLVVSP 9
PD+ VSP
Sbjct: 243 PDMAVSP 249


>sp|MPTE_PYRFU|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VTPDLVVS 8
+TPD+VV+
Sbjct: 93 ITPDVVVT 100


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 1 VTPDLVVSP 9
+ PD++++P
Sbjct: 394 IVPDIIINP 402


>sp|PYRB_PICTO|ASPARTATE carbamoyltransferase catalytic subunit|Picrophilus torridus (strain

Query: 1 VTPDLVVSPG 10
V+PDL+ PG
Sbjct: 186 VSPDLLRLPG 195


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TPDLVVSPG 10
TPD ++ PG
Sbjct: 287 TPDAIMIPG 295


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VTPDLVVSP 9
+TP L+V+P
Sbjct: 163 LTPSLLVNP 171


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VTPDLVVSP 9
+TP L+V+P
Sbjct: 163 LTPSLLVNP 171


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTPDLVVSPG 10
+TP++ + PG
Sbjct: 746 ITPNIDIPPG 755


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 2 TPDLVVSPG 10
+P LVV+PG
Sbjct: 96 SPGLVVAPG 104


>sp|PRPB_AERPE|2-METHYLISOCITRATE lyase|Aeropyrum pernix (strain ATCC 700893

Query: 4 DLVVSPG 10
D+VV+PG
Sbjct: 24 DIVVAPG 30


>sp|SURE_METHJ|5'-NUCLEOTIDASE SurE|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VTPDLVVS 8
V PDLVVS
Sbjct: 103 VKPDLVVS 110


>sp|DPHB_SACS2|DIPHTHINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TPDLVVSPG 10
TP +++ PG
Sbjct: 233 TPHIIIIPG 241


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 VTPDLVVSP 9
V PD++++P
Sbjct: 904 VVPDIILNP 912


>sp|DPHB_SACI7|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 TPDLVVSPG 10
TP +++ PG
Sbjct: 233 TPHIIIIPG 241


>sp|DPHB_SACI6|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 TPDLVVSPG 10
TP +++ PG
Sbjct: 233 TPHIIIIPG 241


>sp|DPHB_SACI4|DIPHTHINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 TPDLVVSPG 10
TP +++ PG
Sbjct: 233 TPHIIIIPG 241


>sp|DPHB_SACI3|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 TPDLVVSPG 10
TP +++ PG
Sbjct: 233 TPHIIIIPG 241


>sp|DPHB_SACI2|DIPHTHINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 TPDLVVSPG 10
TP +++ PG
Sbjct: 233 TPHIIIIPG 241


>sp|DPHB_SACI1|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 TPDLVVSPG 10
TP +++ PG
Sbjct: 233 TPHIIIIPG 241


>sp|COFC_METPS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella paludicola (strain DSM 17711

Query: 4 DLVVSPG 10
D+V+SPG
Sbjct: 107 DVVISPG 113


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 PDLVVSPG 10
PD+V+ PG
Sbjct: 287 PDIVILPG 294




216|SequenceR|1085|1076|LTPCKVTPDL

>sp|Y343_META3|UPF0280 protein Maeo_0343|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TPCKVTPD 9
TP KV+PD
Sbjct: 52 TPIKVSPD 59


>sp|LIPB2_PICTO|PROBABLE octanoyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 1 LTPCKVTPDL 10
+ PC +PD+
Sbjct: 185 IMPCNFSPDI 194


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KVTPDL 10
KVTPDL
Sbjct: 318 KVTPDL 323


>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain ATCC

Query: 3 PCKVTPD 9
PC VTP+
Sbjct: 192 PCVVTPE 198


>sp|RS10_METTP|SMALL ribosomal subunit protein uS10|Methanothrix thermoacetophila

Query: 1 LTPCKVTPD 9
+ PC+ +PD
Sbjct: 46 VVPCRKSPD 54


>sp|RS19_HYPBU|SMALL ribosomal subunit protein uS19|Hyperthermus butylicus (strain DSM

Query: 3 PCKVTPDL 10
P K+TP++
Sbjct: 103 PVKITPEM 110




217|SequenceR|1090|1081|LNFQKLTPCK

***** No hits found ******


218|SequenceR|1095|1086|LQNYSLNFQK

>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LQNYSLNFQK 10
++NYSLN K
Sbjct: 212 VKNYSLNMLK 221


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LQNYSLNFQ 9
L+NY +N++
Sbjct: 171 LRNYDMNYK 179


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LQNYSLNFQK 10
+ NY NF K
Sbjct: 228 MHNYKQNFSK 237


>sp|ISF1_METJA|IRON-SULFUR flavoprotein MJ0731|Methanocaldococcus jannaschii (strain ATCC

Query: 3 NYSLNFQK 10
NY+LN+ K
Sbjct: 20 NYALNYLK 27


>sp|COFC_METMP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 3 NYSLNFQK 10
N+SLNF K
Sbjct: 84 NFSLNFIK 91


>sp|NADM_METMP|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LQNYSLNF 8
L+NY +N+
Sbjct: 60 LENYDINY 67


>sp|NADM_METM7|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 LQNYSLNF 8
L+NY +N+
Sbjct: 60 LENYDINY 67


>sp|NADM_METM5|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 LQNYSLNF 8
L+NY +N+
Sbjct: 60 LENYDINY 67


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 1 LQNYSLNFQ 9
L+NY+LN Q
Sbjct: 144 LENYTLNEQ 152


>sp|NADM_METM6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 LQNYSLNF 8
L+NY +N+
Sbjct: 60 LENYDINY 67




219|SequenceR|1100|1091|EPVFSLQNYS

>sp|AATD_METVS|A-TYPE ATP synthase subunit D|Methanococcus vannielii (strain ATCC 35089

Query: 2 PVFSLQN 8
PVF LQN
Sbjct: 103 PVFELQN 109


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PVFSLQNY 9
PVF L NY
Sbjct: 362 PVFDLYNY 369


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PVFSLQNY 9
P+F L NY
Sbjct: 362 PIFDLYNY 369


>sp|DTDA_THEVO|D-AMINOACYL-TRNA deacylase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PVFSLQNY 9
P+F L NY
Sbjct: 132 PIFDLPNY 139


>sp|DTDA_THEAC|D-AMINOACYL-TRNA deacylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PVFSLQNY 9
P+F + NY
Sbjct: 132 PIFDIPNY 139




220|SequenceR|1105|1096|VDTLNEPVFS

>sp|Y498_METJA|UNCHARACTERIZED protein MJ0498|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDTLNEPV 8
++TLN+PV
Sbjct: 25 INTLNQPV 32


>sp|MTRE_METFE|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanothermus fervidus

Query: 3 TLNEPVF 9
T N+PVF
Sbjct: 118 TFNQPVF 124


>sp|RPIA_HALWD|RIBOSE-5-PHOSPHATE isomerase A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VDTLNEPV 8
V+TL+EPV
Sbjct: 129 VETLSEPV 136


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 2 DTLNEPVF 9
+T+N P+F
Sbjct: 393 ETINHPIF 400


>sp|CBIH_METJA|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanocaldococcus

Query: 1 VDTLNEPVFS 10
V+ LN+P+++
Sbjct: 39 VERLNKPIYT 48


>sp|Y2657_METHJ|UPF0210 protein Mhun_2657|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VDTLNEPVFS 10
+DTLN+ +++
Sbjct: 38 LDTLNQKIYA 47




221|SequenceR|1110|1101|ELKEVVDTLN

>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ELKEVVDTLN 10
EL E++DTLN
Sbjct: 233 ELIEIIDTLN 242


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ELKEVVDTL 9
++KE+VDTL
Sbjct: 117 KIKELVDTL 125


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ELKEVVDTL 9
+LKE+VDT+
Sbjct: 117 KLKELVDTI 125


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 1 ELKEVVDTL 9
+LK++VDTL
Sbjct: 117 KLKDLVDTL 125


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELKEVVDTLN 10
++KEVVD LN
Sbjct: 572 KVKEVVDFLN 581


>sp|Y421_METJA|UNCHARACTERIZED protein MJ0421|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKEVVDTLN 10
LKE+VD N
Sbjct: 19 LKEIVDDFN 27


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ELKEVVDTL 9
ELKE VDT
Sbjct: 264 ELKERVDTF 272


>sp|Y1066_METJA|UNCHARACTERIZED protein MJ1066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELKEVVDTL 9
E+ EV+DTL
Sbjct: 18 EINEVIDTL 26


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 ELKEVVDTL 9
ELK+ +DTL
Sbjct: 357 ELKDYIDTL 365


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LKEVVDTLN 10
L EV+DT N
Sbjct: 211 LVEVIDTFN 219


>sp|THSA_HALSA|THERMOSOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 ELKEVVDTL 9
+LKE+VD L
Sbjct: 272 QLKEMVDAL 280


>sp|PFDB_PYRAB|PREFOLDIN subunit beta|Pyrococcus abyssi (strain GE5 /

Query: 1 ELKEVVDTL 9
ELKE V+TL
Sbjct: 74 ELKEKVETL 82


>sp|PFDB_PYRFU|PREFOLDIN subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELKEVVDTL 9
ELKE V+TL
Sbjct: 74 ELKEKVETL 82


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELKEVVDTL 9
ELK+ +DTL
Sbjct: 360 ELKDYIDTL 368


>sp|PFDB_THEGJ|PREFOLDIN subunit beta|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ELKEVVDTL 9
ELKE V+TL
Sbjct: 74 ELKEKVETL 82




222|SequenceR|1115|1106|ELILQELKEV

>sp|Y1213_ARCFU|UNCHARACTERIZED protein AF_1213|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELILQELKEV 10
ELIL+E++EV
Sbjct: 114 ELILREMREV 123


>sp|Y1322_METST|UPF0280 protein Msp_1322|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ELILQELKE 9
E+IL E+KE
Sbjct: 37 EIILNEIKE 45


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 ELILQELKEV 10
EL+LQ +KEV
Sbjct: 531 ELVLQYIKEV 540


>sp|Y046_METJA|PUTATIVE methyltransferase MJ0046|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ELILQELKEV 10
ELI++++KEV
Sbjct: 228 ELIIKKMKEV 237


>sp|MFNA_METAC|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina acetivorans

Query: 1 ELILQELKEV 10
E+ +Q+LKEV
Sbjct: 382 EIFVQDLKEV 391


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 1 ELILQELK 8
ELIL+ELK
Sbjct: 487 ELILKELK 494


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 1 ELILQELKE 9
ELI Q++KE
Sbjct: 54 ELIKQDIKE 62




223|SequenceR|1120|1111|SIKNGELILQ

>sp|RIBB_METLZ|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 1 SIKNGELIL 9
S++NGE+I+
Sbjct: 13 SLQNGEMII 21


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SIKNGELI 8
S++NGEL+
Sbjct: 951 SVRNGELV 958


>sp|KTHY_THEAC|PROBABLE thymidylate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IKNGELIL 9
IKNGE+++
Sbjct: 70 IKNGEIVI 77


>sp|IF2B_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 IKNGELILQ 10
I NG L+LQ
Sbjct: 74 IDNGRLVLQ 82


>sp|Y1714_PYRHO|UNCHARACTERIZED lipoprotein PH1714|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IKNGELILQ 10
IKNGE++ +
Sbjct: 367 IKNGEIVFK 375


>sp|PUR7_PYRAB|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 KNGELIL 9
KNGE+IL
Sbjct: 178 KNGEIIL 184


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SIKNGELI 8
S+KNG+L+
Sbjct: 592 SVKNGKLV 599


>sp|RIBL_METKA|FAD synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 KNGELIL 9
KNGEL++
Sbjct: 31 KNGELVV 37


>sp|Y655_ARCFU|METALLOPROTEASE AF_0655|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IKNGEL 7
IKNGEL
Sbjct: 362 IKNGEL 367


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IKNGELILQ 10
IKNGEL ++
Sbjct: 48 IKNGELKIE 56


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 IKNGELILQ 10
IKNGEL ++
Sbjct: 48 IKNGELKIE 56


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 IKNGELILQ 10
IKNGEL ++
Sbjct: 48 IKNGELKIE 56


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 1 SIKNGELIL 9
+ KNGEL L
Sbjct: 199 AFKNGELTL 207




224|SequenceR|1125|1116|PSCIGSIKNG

>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PSCIGSIKNG 10
P C GSIK G
Sbjct: 651 PKCGGSIKKG 660


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila (strain

Query: 2 SCIGSIKNG 10
+C GSIK+G
Sbjct: 503 ACRGSIKSG 511


>sp|Y1485_METJA|UNCHARACTERIZED cation transporter MJ1485|Methanocaldococcus jannaschii (strain

Query: 1 PSCIGSIK 8
PS IG+IK
Sbjct: 177 PSAIGTIK 184


>sp|RS17_NANEQ|SMALL ribosomal subunit protein uS17|Nanoarchaeum equitans (strain

Query: 1 PSCIGSIKNG 10
P C+ IK G
Sbjct: 73 PECLKDIKEG 82


>sp|ARGB_METST|ACETYLGLUTAMATE kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 SCIGSIKNG 10
+CI +++NG
Sbjct: 259 TCINAVENG 267


>sp|MTAP_NITMS|S-METHYL-5'-THIOADENOSINE phosphorylase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PSCIGSIK 8
PS +GS+K
Sbjct: 87 PSAVGSLK 94


>sp|PYRI_META3|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus aeolicus

Query: 1 PSCIGSIKN 9
P+CI +I+N
Sbjct: 116 PNCITNIEN 124


>sp|SUI1_ARCFU|PROTEIN translation factor SUI1 homolog|Archaeoglobus fulgidus (strain

Query: 2 SCIGSIKNG 10
+C G++KNG
Sbjct: 65 ACGGTVKNG 73




225|SequenceR|1130|1121|EKLRLPSCIG

>sp|PGK_METKA|PHOSPHOGLYCERATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 4 RLPSCIG 10
RLPSC+G
Sbjct: 168 RLPSCVG 174


>sp|TRPA_METJA|TRYPTOPHAN synthase alpha chain|Methanocaldococcus jannaschii (strain ATCC

Query: 4 RLPSCIG 10
++P+C+G
Sbjct: 205 KIPACVG 211


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EKLRLPSCIG 10
EKL L C+G
Sbjct: 305 EKLGLSYCVG 314


>sp|RNH2_ARCFU|RIBONUCLEASE HII|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RLPSCI 9
R+PSC+
Sbjct: 182 RIPSCV 187




226|SequenceR|1135|1126|NLIKLEKLRL

>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 1 NLIKLEKLRL 10
+L+KLEKL L
Sbjct: 310 DLVKLEKLDL 319




227|SequenceR|1140|1131|HNKSLNLIKL

>sp|Y1426_METJA|UNCHARACTERIZED protein MJ1426|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HNKSLNLI 8
HN+ LNLI
Sbjct: 73 HNEDLNLI 80


>sp|XERA_THEON|TYROSINE recombinase XerA|Thermococcus onnurineus (strain NA1)

Query: 2 NKSLNLI 8
NKSLNL+
Sbjct: 61 NKSLNLV 67




228|SequenceR|1145|1136|SLSSIHNKSL

>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus

Query: 3 SSIHNK 8
SSIHNK
Sbjct: 83 SSIHNK 88




229|SequenceR|1150|1141|ELFNESLSSI

>sp|MFND_METFA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus fervens (strain DSM 4213

Query: 1 ELFNESLSSI 10
E+FNE++ ++
Sbjct: 214 EIFNEAIKAV 223


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ELFNES 6
ELFNES
Sbjct: 12 ELFNES 17


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ELFNESLSSI 10
ELFNE++ +
Sbjct: 468 ELFNENMDKL 477




230|SequenceR|1155|1146|VKPCAELFNE

>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VKPCAELFNE 10
+KPC E +E
Sbjct: 233 IKPCMECLDE 242


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 5 AELFNE 10
AELFNE
Sbjct: 467 AELFNE 472


>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 CAELFN 9
CA+LFN
Sbjct: 392 CAKLFN 397


>sp|DTDA_METM5|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C5 /

Query: 1 VKPCAELFN 9
+ PC +FN
Sbjct: 85 ISPCNPIFN 93


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKPCAELFNE 10
VKP +L NE
Sbjct: 222 VKPILKLINE 231


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 1 VKPCAELF 8
VKP ELF
Sbjct: 244 VKPALELF 251


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 1 VKPCAELF 8
VK C++LF
Sbjct: 120 VKECSQLF 127


>sp|COFH2_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanococcus maripaludis (strain

Query: 2 KPCAELFNE 10
K C ELF +
Sbjct: 14 KDCVELFED 22




231|SequenceR|1160|1151|ASFSEVKPCA

>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 1 ASFSEVKPCA 10
A F+E KP A
Sbjct: 45 ARFAETKPLA 54


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 1 ASFSEVKPCA 10
A F+E KP A
Sbjct: 45 ARFAETKPLA 54




232|SequenceR|1165|1156|LFNMRASFSE

***** No hits found ******


233|SequenceR|1170|1161|FPMAALFNMR

>sp|SYS2_METKA|TYPE-2 serine--tRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 PMAALFNM 9
PMAALF +
Sbjct: 220 PMAALFEV 227


>sp|TRKA1_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 1 FPMAALFNM 9
FP AL NM
Sbjct: 401 FPKGALINM 409


>sp|CSG_METVS|S-LAYER protein|Methanococcus vannielii (strain ATCC 35089

Query: 2 PMAALFN 8
P AALFN
Sbjct: 200 PAAALFN 206




234|SequenceR|1175|1166|MSPPLFPMAA

>sp|SYFA_SULAC|PHENYLALANINE--TRNA ligase alpha subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PPLFPMA 9
PP FP+A
Sbjct: 205 PPYFPLA 211


>sp|ARGC_ARCFU|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SPPLFP 7
+PPLFP
Sbjct: 327 TPPLFP 332


>sp|KDGA_SACS2|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PPLFPM 8
PP+FP+
Sbjct: 276 PPIFPL 281


>sp|KDGA_SACSO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 3 PPLFPM 8
PP+FP+
Sbjct: 262 PPIFPL 267


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 2 SPPLFPMAA 10
+P +FPMAA
Sbjct: 275 APYIFPMAA 283


>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PPLFPM 8
PP+FP+
Sbjct: 259 PPIFPL 264


>sp|GNTDO_HALSB|GENTISATE 1,2-dioxygenase|Haloferax sp

Query: 3 PPLFP 7
PPLFP
Sbjct: 268 PPLFP 272




235|SequenceR|1180|1171|LKLITMSPPL

>sp|AROE_AERPE|SHIKIMATE dehydrogenase (NADP(+))|Aeropyrum pernix (strain ATCC 700893

Query: 1 LKLITMSPP 9
LKL T SPP
Sbjct: 107 LKLYTASPP 115


>sp|DPHB_METHJ|DIPHTHINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LKLITMSPPL 10
LKL+ PPL
Sbjct: 217 LKLVDFGPPL 226


>sp|ASPD_METTH|L-ASPARTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LKLITMSPP 9
+KLIT PP
Sbjct: 142 VKLITRKPP 150


>sp|DUT_METMA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 2 KLITMSPPL 10
KLI +PPL
Sbjct: 11 KLIKANPPL 19




236|SequenceR|1185|1176|FKNQSLKLIT

>sp|ENO_PICTO|ENOLASE torridus (strain ATCC 700027

Query: 1 FKNQSLKL 8
FKNQS+ L
Sbjct: 187 FKNQSIGL 194




237|SequenceR|1190|1181|EPICSFKNQS

>sp|MTRA_METV3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus voltae (strain ATCC

Query: 1 EPICSFKNQ 9
EP+ F+NQ
Sbjct: 121 EPVARFQNQ 129


>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii (strain

Query: 2 PICSFKNQ 9
P+ +FKNQ
Sbjct: 192 PLSAFKNQ 199


>sp|NPPNK_METJA|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanocaldococcus jannaschii (strain

Query: 2 PICSFKNQS 10
PIC FK S
Sbjct: 499 PICPFKLSS 507


>sp|CPS_METS3|CARBAMOYL-PHOSPHATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EPICSFKN 8
EP+ SFKN
Sbjct: 328 EPLKSFKN 335


>sp|Y755_METJA|UNCHARACTERIZED protein MJ0755|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PICSFKNQS 10
PIC F N S
Sbjct: 187 PICPFCNYS 195


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PICSFKNQ 9
PIC KN+
Sbjct: 350 PICPVKNK 357


>sp|COFH_METAR|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocella arvoryzae (strain DSM

Query: 4 CSFKN 8
CSFKN
Sbjct: 67 CSFKN 71




238|SequenceR|1195|1186|LNLIAEPICS

>sp|DTDA_DESA1|D-AMINOACYL-TRNA deacylase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 4 IAEPIC 9
+AEP+C
Sbjct: 206 LAEPVC 211




239|SequenceR|1200|1191|SRLHPLNLIA

>sp|PYRDB_ARCFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Archaeoglobus fulgidus

Query: 1 SRLHPLNLIA 10
S++H LNLIA
Sbjct: 26 SKVHSLNLIA 35


>sp|SYY_AERPE|TYROSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RLHPLNL 8
RLHPL+L
Sbjct: 320 RLHPLDL 326


>sp|MTM7_METJA|PUTATIVE type II methyltransferase M.MjaORF1200P|Methanocaldococcus

Query: 2 RLHPLNL 8
RLHPL L
Sbjct: 292 RLHPLKL 298


>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SRLHPLNL 8
S LHPL+L
Sbjct: 290 SELHPLDL 297


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 RLHPLNL 8
+LHPL+L
Sbjct: 333 KLHPLDL 339


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 RLHPLNL 8
+LHPL+L
Sbjct: 333 KLHPLDL 339


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RLHPLNL 8
+LHPL+L
Sbjct: 333 KLHPLDL 339


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RLHPLNL 8
+LHPL+L
Sbjct: 333 KLHPLDL 339


>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RLHPLNL 8
+LHPL+L
Sbjct: 320 KLHPLDL 326


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RLHPLNL 8
+LHPL+L
Sbjct: 317 KLHPLDL 323


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RLHPLNL 8
+LHPL+L
Sbjct: 333 KLHPLDL 339


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 RLHPLNLIA 10
R H +NLIA
Sbjct: 21 RAHTINLIA 29


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 4 HPLNLI 9
HPLNL+
Sbjct: 304 HPLNLL 309


>sp|AATC_THEKO|A-TYPE ATP synthase subunit C|Thermococcus kodakarensis (strain ATCC

Query: 2 RLHPLNLIA 10
R HPL++ A
Sbjct: 318 RFHPLSIAA 326


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RLHPLNL 8
+LHPL+L
Sbjct: 333 KLHPLDL 339


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 RLHPLNL 8
+LHPL+L
Sbjct: 333 KLHPLDL 339


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LHPLNL 8
LHP+NL
Sbjct: 196 LHPVNL 201


>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 3 LHPLNL 8
LHP+NL
Sbjct: 196 LHPVNL 201


>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LHPLNL 8
LHP+NL
Sbjct: 196 LHPVNL 201


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 RLHPLNLIA 10
R H +NLIA
Sbjct: 23 RKHTINLIA 31


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 2 RLHPLNLIA 10
R H +NLIA
Sbjct: 21 RSHTINLIA 29


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RLHPLNLIA 10
R H +NLIA
Sbjct: 21 RSHTINLIA 29


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 RLHPLNLIA 10
R H +NLIA
Sbjct: 21 RSHTINLIA 29




240|SequenceR|1205|1196|SSMDLSRLHP

>sp|UDGB_PYRAE|TYPE-5 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC

Query: 3 MDLSRLH 9
MDL+R+H
Sbjct: 1 MDLARVH 7


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 DLSRLHP 10
DLS LHP
Sbjct: 43 DLSSLHP 49


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 DLSRLHP 10
+LSR+HP
Sbjct: 252 ELSRVHP 258




241|SequenceR|1210|1201|YQIDNSSMDL

>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YQIDNSSM 8
+QIDN+S+
Sbjct: 228 FQIDNASL 235


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YQIDNSSM 8
YQ+D SSM
Sbjct: 341 YQVDFSSM 348


>sp|ENO_METS5|ENOLASE sedula (strain ATCC 51363

Query: 1 YQIDNSS 7
Y+IDN+S
Sbjct: 253 YEIDNTS 259




242|SequenceR|1215|1206|APGPLYQIDN

>sp|TBP3_METAC|TATA-BOX-BINDING protein 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PGPLYQIDN 10
PG +Y+IDN
Sbjct: 41 PGLVYRIDN 49


>sp|OTC_HYPBU|ORNITHINE carbamoyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PGPLYQID 9
PGPLY D
Sbjct: 2 PGPLYGRD 9


>sp|TBP_ARCFU|TATA-BOX-BINDING protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGPLYQIDN 10
PG +Y++DN
Sbjct: 134 PGLVYRLDN 142


>sp|RNZ_ARCFU|RIBONUCLEASE Z|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGPLY 6
PGPLY
Sbjct: 169 PGPLY 173


>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGPLYQI 8
PGP+Y++
Sbjct: 171 PGPVYRV 177


>sp|PSB_PICTO|PROTEASOME subunit beta|Picrophilus torridus (strain ATCC 700027

Query: 5 LYQIDN 10
LYQIDN
Sbjct: 41 LYQIDN 46


>sp|PTH_SULAC|PEPTIDYL-TRNA hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 APGPLYQIDN 10
PGP IDN
Sbjct: 103 GPGPEEMIDN 112


>sp|SURE_AERPE|5'-NUCLEOTIDASE SurE|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGPLYQIDN 10
P LY+IDN
Sbjct: 226 PVSLYKIDN 234


>sp|TBP3_METMA|TATA-BOX-BINDING protein 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGPLYQIDN 10
PG +Y+I+N
Sbjct: 41 PGLVYRINN 49


>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PLYQIDN 10
PLY+I+N
Sbjct: 243 PLYEIEN 249


>sp|TBP_PYRIL|TATA-BOX-BINDING protein|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GPLYQIDN 10
GP Y+I+N
Sbjct: 5 GPTYRIEN 12


>sp|SYFA_METAC|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 APGPLYQI 8
AP PLY +
Sbjct: 224 APNPLYGV 231


>sp|TBP2_METAC|TATA-BOX-BINDING protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PGPLYQIDN 10
PG +Y+I+N
Sbjct: 41 PGLVYRIEN 49


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 LYQIDN 10
LYQ+DN
Sbjct: 612 LYQLDN 617


>sp|TBP_PYRAE|TATA-BOX-BINDING protein|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 APGPLYQIDN 10
+ GP Y+I+N
Sbjct: 3 SKGPSYRIEN 12


>sp|TBP_PYRNV|TATA-BOX-BINDING protein|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 APGPLYQIDN 10
+ GP Y+I+N
Sbjct: 3 SKGPSYRIEN 12


>sp|TBP_PYRCJ|TATA-BOX-BINDING protein|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 APGPLYQIDN 10
+ GP Y+I+N
Sbjct: 3 SKGPSYRIEN 12




243|SequenceR|1220|1211|LSKWHAPGPL

>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KWHAPG 8
KWH PG
Sbjct: 413 KWHLPG 418


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 4 WHAPGPL 10
WH P PL
Sbjct: 349 WHLPRPL 355


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 4 WHAPGPL 10
WH P PL
Sbjct: 349 WHLPRPL 355


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSKWHAPGP 9
L+KW P P
Sbjct: 519 LAKWKKPEP 527


>sp|Y679_METMA|UPF0285 protein MM_0679|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LSKWHA 6
L KWHA
Sbjct: 294 LGKWHA 299


>sp|Y3856_METAC|UPF0285 protein MA_3856|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LSKWHA 6
L KWHA
Sbjct: 294 LGKWHA 299


>sp|Y208_METBF|UPF0285 protein Mbar_A0208|Methanosarcina barkeri (strain Fusaro /

Query: 1 LSKWHA 6
L KWHA
Sbjct: 294 LGKWHA 299


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SKWHAPGPL 10
+ WH GP+
Sbjct: 291 ASWHLDGPV 299


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 2 SKWHAPGPL 10
+ WH GP+
Sbjct: 291 ASWHLDGPV 299


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 2 SKWHAPGPL 10
+ WH GP+
Sbjct: 291 ASWHLDGPV 299


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 2 SKWHAPGPL 10
+ WH GP+
Sbjct: 291 ASWHLDGPV 299


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 2 SKWHAPGPL 10
+ WH GP+
Sbjct: 291 ASWHLDGPV 299


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 2 SKWHAPGPL 10
+ WH GP+
Sbjct: 291 ASWHLDGPV 299


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 2 SKWHAPGPL 10
+ WH GP+
Sbjct: 291 ASWHLDGPV 299


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 2 SKWHAPGPL 10
+ WH GP+
Sbjct: 291 ASWHLDGPV 299


>sp|Y500_AERPE|UPF0282 protein APE_0500.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSKWHAPGPL 10
L KW P PL
Sbjct: 188 LLKWSKPRPL 197


>sp|AROA_PYRAB|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 SKWHAPG 8
SK+H PG
Sbjct: 220 SKFHVPG 226


>sp|RF1_SACS2|PEPTIDE chain release factor subunit|Saccharolobus solfataricus (strain

Query: 1 LSKWHAPG 8
L KW AP
Sbjct: 20 LKKWKAPA 27


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSKWHAPG 8
L KW AP
Sbjct: 24 LKKWSAPA 31


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 2 SKWHAPGP 9
SKW P P
Sbjct: 517 SKWQPPKP 524


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 LSKWHAPGP 9
L+KW P P
Sbjct: 817 LAKWPEPNP 825


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LSKWHAPGP 9
L +W+AP P
Sbjct: 106 LERWYAPEP 114


Query: 4 WHAPGPL 10
WH+P P+
Sbjct: 197 WHSPRPI 203


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 SKWHAP 7
+ WHAP
Sbjct: 310 ATWHAP 315


>sp|RNP3_THEGJ|RIBONUCLEASE P protein component 3|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SKWHAPGP 9
SKW GP
Sbjct: 175 SKWEVRGP 182


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSKWH 5
LSKWH
Sbjct: 309 LSKWH 313


>sp|DCDB_METB6|DCTP deaminase, dUMP-forming|Methanoregula boonei (strain DSM 21154

Query: 4 WHAPG 8
W+APG
Sbjct: 42 WYAPG 46


>sp|AROC_HALSA|CHORISMATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SKWHAP 7
+ WHAP
Sbjct: 309 ASWHAP 314


>sp|RS4_SACI7|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 3 KWHAPG 8
KW +PG
Sbjct: 10 KWESPG 15


>sp|RS4_SACI6|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 3 KWHAPG 8
KW +PG
Sbjct: 10 KWESPG 15


>sp|RS4_SACI4|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 3 KWHAPG 8
KW +PG
Sbjct: 10 KWESPG 15


>sp|RS4_SACI3|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 3 KWHAPG 8
KW +PG
Sbjct: 10 KWESPG 15


>sp|RS4_SACI2|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 3 KWHAPG 8
KW +PG
Sbjct: 10 KWESPG 15


>sp|RS4_SACI1|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 3 KWHAPG 8
KW +PG
Sbjct: 10 KWESPG 15


>sp|CBSA_SULAC|CYTOCHROME b558/566 subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 WHAPGPL 10
WH+P P+
Sbjct: 189 WHSPRPV 195


Query: 1 LSKWHAPGP 9
L +W AP P
Sbjct: 98 LEEWQAPEP 106


>sp|AROC_HALWD|CHORISMATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SKWHAP 7
+ WHAP
Sbjct: 298 ATWHAP 303




244|SequenceR|1225|1216|LERLNLSKWH

>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 ERLNLSKWH 10
ER++L +WH
Sbjct: 673 ERISLGQWH 681


>sp|ASSY_PYRFU|ARGININOSUCCINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LERLNLSKW 9
LE+L L+KW
Sbjct: 281 LEKLTLTKW 289


>sp|SUDHB_PYRFU|SULFIDE dehydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LERLNLSKW 9
LE+++L KW
Sbjct: 263 LEKISLEKW 271


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 1 LERLNLSK 8
+ERLNLS+
Sbjct: 368 IERLNLSE 375


>sp|RADA_IGNH4|DNA repair and recombination protein|Ignicoccus hospitalis (strain

Query: 1 LERLNLSK 8
LER+NL K
Sbjct: 80 LERMNLRK 87


>sp|NADK_METB6|NAD kinase|Methanoregula boonei (strain DSM 21154

Query: 2 ERLNLSKWH 10
ER+ LS W+
Sbjct: 113 ERMRLSLWN 121


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 LERLNLSK 8
L+RLNL+K
Sbjct: 266 LDRLNLNK 273


>sp|CDC45_SACS2|CELL division control protein 45|Saccharolobus solfataricus (strain ATCC

Query: 1 LERLNLSKW 9
L+R +LS+W
Sbjct: 121 LDRRSLSEW 129


>sp|SURE_METST|5'-NUCLEOTIDASE SurE|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 RLNLSKW 9
++N+SKW
Sbjct: 248 QVNISKW 254


>sp|Y164_METJA|UNCHARACTERIZED protein MJ0164|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ERLNLSKW 9
+++NL KW
Sbjct: 95 DKINLMKW 102




245|SequenceR|1230|1221|NHSFLLERLN

>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HSFLLER 8
HSFLLER
Sbjct: 290 HSFLLER 296


>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NHSFLLERLN 10
+H FL+ RLN
Sbjct: 147 HHKFLISRLN 156


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NHSFLLE 7
NHSFLL+
Sbjct: 241 NHSFLLK 247


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 NHSFLLERLN 10
+H FL ERL+
Sbjct: 139 HHKFLSERLS 148


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 1 NHSFLLERLN 10
+H FL+E+L+
Sbjct: 141 HHKFLVEKLS 150


>sp|ARGC_METTH|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 HSFLLERL 9
H+FLLE L
Sbjct: 237 HTFLLEDL 244


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NHSFLLERL 9
+H FL ERL
Sbjct: 141 HHKFLSERL 149


>sp|ARGB_METST|ACETYLGLUTAMATE kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NHSFLLE 7
NHS LLE
Sbjct: 279 NHSILLE 285




246|SequenceR|1235|1226|LISIQNHSFL

>sp|Y129_METJA|UNCHARACTERIZED protein MJ0129|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SIQNHSFL 10
S+ NH+FL
Sbjct: 109 SLTNHAFL 116




247|SequenceR|1240|1231|KESLDLISIQ

>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KESLDLISIQ 10
+ES D++S+Q
Sbjct: 761 QESADMVSVQ 770




248|SequenceR|1245|1236|SWLYAKESLD

>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SWLYAKESLD 10
+WLYA S+D
Sbjct: 2062 NWLYAHNSMD 2071


>sp|RS2_NATPD|SMALL ribosomal subunit protein uS2|Natronomonas pharaonis (strain ATCC

Query: 2 WLYAKESLD 10
WL A E+LD
Sbjct: 252 WLLANETLD 260


>sp|RS2_HALSA|SMALL ribosomal subunit protein uS2|Halobacterium salinarum (strain ATCC

Query: 2 WLYAKESLD 10
WL A E+LD
Sbjct: 224 WLLANETLD 232


>sp|RS2_HALS3|SMALL ribosomal subunit protein uS2|Halobacterium salinarum (strain ATCC

Query: 2 WLYAKESLD 10
WL A E+LD
Sbjct: 224 WLLANETLD 232


>sp|RS2_HALWD|SMALL ribosomal subunit protein uS2|Haloquadratum walsbyi (strain DSM

Query: 2 WLYAKESLD 10
WL A E+LD
Sbjct: 254 WLLANETLD 262


>sp|RS2_HALMA|SMALL ribosomal subunit protein uS2|Haloarcula marismortui (strain ATCC

Query: 2 WLYAKESLD 10
WL A E+LD
Sbjct: 242 WLLANETLD 250


>sp|AMZA_PYRFU|ARCHAEMETZINCIN furiosus (strain ATCC 43587

Query: 1 SWLYAKESL 9
SW+Y K L
Sbjct: 168 SWMYCKNCL 176


>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 4 YAKESLD 10
YAKE+LD
Sbjct: 47 YAKEALD 53


>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 YAKESLD 10
YAKE+LD
Sbjct: 47 YAKEALD 53


>sp|PDXS_DESA1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Desulfurococcus amylolyticus

Query: 2 WLYAKES 8
W+Y+KE+
Sbjct: 222 WVYSKEN 228


>sp|Y601_METMP|PROBABLE minor pilin MMP0601|Methanococcus maripaludis (strain DSM 14266

Query: 2 WLYAKE 7
W YAKE
Sbjct: 190 WFYAKE 195


>sp|CBID_ARCFU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SWLYAKESL 9
+WLYA++
Sbjct: 219 AWLYARKKF 227




249|SequenceR|1250|1241|LKEVRSWLYA

>sp|NIFB_METJA|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus jannaschii

Query: 1 LKEVRSWLY 9
LKE+ W+Y
Sbjct: 153 LKEIVEWVY 161


>sp|IDI2_SULTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KEVRSWL 8
KE+R+WL
Sbjct: 345 KELRNWL 351


>sp|Y1514_METJA|PUTATIVE gamma-glutamylcyclotransferase MJ1514|Methanocaldococcus jannaschii

Query: 2 KEVRSWLY 9
KE+ +WLY
Sbjct: 93 KEIEAWLY 100


>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei

Query: 2 KEVRSWL 8
KE+R W+
Sbjct: 56 KEIREWV 62


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LKEVRSWLYA 10
++E+R +LY+
Sbjct: 176 IREIREFLYS 185


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LKEVRSWLYA 10
+KEVR W+ +
Sbjct: 444 VKEVRDWVIS 453


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEVRSWLY 9
KEV +W++
Sbjct: 1124 KEVENWIF 1131


>sp|ARGDC_IGNH4|ARGININE decarboxylase proenzyme|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LKEVRSWLYA 10
L EVRSW +
Sbjct: 56 LVEVRSWKFT 65


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 LKEVRSWLYA 10
L++VR+W+ A
Sbjct: 25 LEQVRAWVEA 34




250|SequenceR|1255|1246|NHSLHLKEVR

>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 LHLKEVR 10
LHLKE+R
Sbjct: 379 LHLKELR 385


>sp|HIS3_HALWD|PHOSPHORIBOSYL-AMP cyclohydrolase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HSLHLKEVR 10
H+ H++E+R
Sbjct: 76 HTQHIREIR 84


>sp|KTHY_METHJ|PROBABLE thymidylate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NHSLHLKEV 9
+H+ HL+EV
Sbjct: 64 DHAAHLREV 72


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 2 HSLHLKEVR 10
HSL +EVR
Sbjct: 300 HSLEKREVR 308




251|SequenceR|1260|1251|IEKLKNHSLH

>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 1 IEKLKNHSL 9
+EKLKN++L
Sbjct: 108 LEKLKNYNL 116


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EKLKNHSLH 10
E LK H LH
Sbjct: 9 ETLKEHKLH 17


>sp|SRP54_ARCFU|SIGNAL recognition particle 54 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 1 IEKLKNHSL 9
+EKLK+H +
Sbjct: 168 LEKLKDHDM 176


>sp|ECFA_METAC|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 EKLKNHSL 9
E+LKNH +
Sbjct: 243 ERLKNHGV 250


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IEKLKNHSL 9
++K+KN+SL
Sbjct: 108 LDKIKNYSL 116


>sp|GGGPS_THEGJ|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 EKLKNHSLH 10
EKLK LH
Sbjct: 13 EKLKKEKLH 21


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 2 EKLKNH 7
EKL+NH
Sbjct: 198 EKLRNH 203


>sp|TAL_METM6|PROBABLE transaldolase|Methanococcus maripaludis (strain C6 /

Query: 1 IEKLKNHSL 9
++KL NHSL
Sbjct: 189 LDKLFNHSL 197


>sp|FRXA_PYRFU|PROTEIN FrxA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EKLKNHSLH 10
E+LKN LH
Sbjct: 91 ERLKNAELH 99


>sp|GGGPS_THESM|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus sibiricus (strain DSM 12597

Query: 2 EKLKNHSLH 10
EKLK LH
Sbjct: 13 EKLKEEKLH 21


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 IEKLKNHS 8
IEKLKN S
Sbjct: 220 IEKLKNIS 227


>sp|TAL_METVS|PROBABLE transaldolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IEKLKNHSL 9
++KL NHSL
Sbjct: 189 LDKLFNHSL 197


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 2 EKLKNHSL 9
EKL NH L
Sbjct: 525 EKLVNHDL 532


>sp|ILVC_PYRCJ|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum calidifontis (strain DSM

Query: 1 IEKLKNHSL 9
+EK KNH +
Sbjct: 306 MEKAKNHPI 314


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 2 EKLKNH 7
E+LKNH
Sbjct: 225 ERLKNH 230




252|SequenceR|1265|1256|GIEPPIEKLK

>sp|AROE_METBF|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 1 GIEPPIEKLK 10
GIEPP+E +K
Sbjct: 262 GIEPPVELMK 271


>sp|AROE_METMA|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GIEPPIEKLK 10
G+EPP+E +K
Sbjct: 262 GVEPPLELMK 271


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 GIEPPIEKLK 10
IEPPI KLK
Sbjct: 395 SIEPPIVKLK 404


>sp|KPYK_THELN|PYRUVATE kinase|Thermococcus litoralis (strain ATCC 51850

Query: 1 GIEPPIEKL 9
G+E PIEKL
Sbjct: 249 GVEMPIEKL 257


>sp|Y1893_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 1 GIEPPIE 7
GIEPP+E
Sbjct: 511 GIEPPLE 517


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 1 GIEPPIE 7
GIEPP+E
Sbjct: 511 GIEPPLE 517


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM

Query: 1 GIEPPIEKLK 10
GI+ P+EKL+
Sbjct: 84 GIQRPLEKLR 93


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 1 GIEPPIEKLK 10
GI+ P+EKL+
Sbjct: 84 GIQRPLEKLR 93


>sp|Y047_ARCFU|UNCHARACTERIZED protein AF_0047|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GIEPPIEKLK 10
G+EP + KLK
Sbjct: 44 GVEPELNKLK 53


>sp|ENO_SULAC|ENOLASE acidocaldarius (strain ATCC 33909

Query: 1 GIEPPIEK 8
G PP+EK
Sbjct: 206 GFSPPLEK 213


>sp|RL1_PYRHO|LARGE ribosomal subunit protein uL1|Pyrococcus horikoshii (strain ATCC

Query: 1 GIEPPIEKLK 10
IEP +EKLK
Sbjct: 144 NIEPIVEKLK 153


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GIEPPIEKL 9
GI PPI+ L
Sbjct: 343 GINPPIDAL 351


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GIEPPIEKL 9
GIEPPI L
Sbjct: 343 GIEPPINVL 351


>sp|HIS2_METPE|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GIEPPIEKL 9
GI+ P+EK+
Sbjct: 36 GIDKPLEKV 44


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 IEPPIEKLK 10
IEPP+ KL+
Sbjct: 407 IEPPVVKLR 415


>sp|AMZA_AERPE|ARCHAEMETZINCIN pernix (strain ATCC 700893

Query: 2 IEPPIE 7
+EPPIE
Sbjct: 43 LEPPIE 48


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 1 GIEPPIEKL 9
GI+PPI L
Sbjct: 342 GIQPPINVL 350


>sp|AROE_METAR|SHIKIMATE dehydrogenase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 1 GIEPPIEKLK 10
G++PP++ ++
Sbjct: 253 GVKPPVDVME 262


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GIEPPI 6
GIEPP+
Sbjct: 251 GIEPPV 256


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 2 IEPPIEKLK 10
I PIEKLK
Sbjct: 765 IHVPIEKLK 773


>sp|AROK_AERPE|SHIKIMATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GIEPPIEKL 9
G+E P+E L
Sbjct: 177 GVENPVENL 185


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 GIEPPIEKL 9
GI PPI L
Sbjct: 340 GIRPPINPL 348


>sp|RL1_THEKO|LARGE ribosomal subunit protein uL1|Thermococcus kodakarensis (strain

Query: 1 GIEPPIEKLK 10
+EP +EKLK
Sbjct: 141 NLEPIVEKLK 150


>sp|RL1_PYRAB|LARGE ribosomal subunit protein uL1|Pyrococcus abyssi (strain GE5 /

Query: 1 GIEPPIEKLK 10
+EP +EKLK
Sbjct: 144 NLEPIVEKLK 153


>sp|PGMI_PYRAE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum aerophilum

Query: 1 GIEPPIEKL 9
G+EPP E L
Sbjct: 162 GLEPPNEAL 170


>sp|TYW2_METJA|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 3 EPPIEKLK 10
E PIE+LK
Sbjct: 205 ERPIERLK 212


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 GIEPPIEK 8
GI+ PIEK
Sbjct: 364 GIDKPIEK 371


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 GIEPPIEKL 9
GI+P +EKL
Sbjct: 525 GIKPVLEKL 533




253|SequenceR|1270|1261|LNELCGIEPP

>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 1 LNELCGIEPP 10
+ + CGI PP
Sbjct: 78 IEDACGIVPP 87


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LNELCGIEPP 10
+NE GI PP
Sbjct: 70 VNEAAGIIPP 79


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 1 LNELCGIE 8
+N+LCGI+
Sbjct: 153 INDLCGIK 160


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 1 LNELCGIE 8
+N+LCGI+
Sbjct: 153 INDLCGIK 160


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 LNELCGIEPP 10
LNEL EPP
Sbjct: 210 LNELPAPEPP 219


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNELCGIE 8
L E+CG+E
Sbjct: 101 LREVCGLE 108


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LNELCGIEPP 10
+N+L EPP
Sbjct: 375 MNDLSATEPP 384


>sp|RNH2_METMP|RIBONUCLEASE HII|Methanococcus maripaludis (strain DSM 14266

Query: 1 LNELCGIE 8
+NE+C +E
Sbjct: 76 INEMCDVE 83


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 LNELCGIEPP 10
LN++ G+E P
Sbjct: 667 LNDVTGLEDP 676


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 ELCGIEPP 10
E+CG++ P
Sbjct: 343 EVCGVDQP 350


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 4 LCGIEP 9
LCG++P
Sbjct: 362 LCGVKP 367


>sp|ILVC_METTH|KETOL-ACID reductoisomerase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 1 LNELCGIE 8
L +LCG+E
Sbjct: 320 LRKLCGLE 327


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 3 ELCGIEPP 10
+LCG E P
Sbjct: 406 DLCGSEKP 413


>sp|MCH_METAC|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 CGIEP 9
CG+EP
Sbjct: 157 CGVEP 161


>sp|Y1111_PYRAE|UNCHARACTERIZED protein PAE1111|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 CGIEP 9
CG+EP
Sbjct: 91 CGVEP 95


>sp|CAS1A_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LNELCGIE 8
LNEL G+E
Sbjct: 146 LNELDGVE 153


>sp|KHSE_META3|HOMOSERINE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LNELCGIEPP 10
+NEL G+E P
Sbjct: 118 INELFGLELP 127


>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus vannielii

Query: 1 LNELCGIEP 9
+E+CG+E
Sbjct: 141 FSEICGVEA 149




254|SequenceR|1275|1266|VDLSTLNELC

>sp|NADE_METB6|NH(3)-DEPENDENT NAD(+) synthetase|Methanoregula boonei (strain DSM 21154

Query: 2 DLSTLNELC 10
DLS ELC
Sbjct: 68 DLSDAQELC 76


>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDLSTLNEL 9
VD+ST+++L
Sbjct: 59 VDISTIHDL 67


>sp|SMC_METJA|CHROMOSOME partition protein Smc|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VDLSTLNEL 9
VDLS LN++
Sbjct: 673 VDLSKLNKI 681




255|SequenceR|1280|1271|ELNYSVDLST

>sp|HJC_SULTO|CROSSOVER junction endodeoxyribonuclease Hjc|Sulfurisphaera tokodaii (strain

Query: 3 NYSVDLST 10
NY++DL T
Sbjct: 111 NYAIDLET 118


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 ELNYSVD 7
E+NY VD
Sbjct: 65 EMNYGVD 71


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 ELNYSVD 7
E+NY VD
Sbjct: 65 EMNYGVD 71


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 ELNYSVD 7
E+NY VD
Sbjct: 65 EMNYGVD 71


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 ELNYSVD 7
E+NY VD
Sbjct: 65 EMNYGVD 71


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 ELNYSVD 7
E+NY VD
Sbjct: 65 EMNYGVD 71


>sp|Y1428_METMA|UPF0228 protein MM_1428|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LNYSVDLST 10
LNYS+D ++
Sbjct: 61 LNYSIDCNS 69




256|SequenceR|1285|1276|PFSRLELNYS

>sp|CMR4_SACS2|CRISPR system CMR subunit Cmr4|Saccharolobus solfataricus (strain ATCC

Query: 1 PFSRLELNY 9
PF R ELNY
Sbjct: 36 PFQRDELNY 44


>sp|ASNH1_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 1|Methanocaldococcus

Query: 2 FSRLELNY 9
F +LELNY
Sbjct: 223 FKKLELNY 230


>sp|PYRB_METBF|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina barkeri

Query: 2 FSRLELNY 9
FSR E+NY
Sbjct: 14 FSRKEINY 21


>sp|Y834_PYRAB|UPF0212 protein PYRAB08340|Pyrococcus abyssi (strain GE5 /

Query: 2 FSRLELNYS 10
F R+EL YS
Sbjct: 42 FVRVELGYS 50


>sp|Y1486_PYRFU|UPF0212 protein PF1486|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FSRLELNYS 10
F R+EL YS
Sbjct: 42 FVRVELGYS 50


>sp|Y1312_PYRHO|UPF0212 protein PH1312|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FSRLELNYS 10
F R+EL YS
Sbjct: 42 FVRVELGYS 50




257|SequenceR|1290|1281|KGMENPFSRL

>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 KGMENPFSRL 10
KGME P SRL
Sbjct: 29 KGMEIPASRL 38


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 1 KGMENPFSRL 10
KGME P SRL
Sbjct: 29 KGMEIPASRL 38


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGMENPFSRL 10
KGME P SRL
Sbjct: 29 KGMEIPASRL 38


>sp|CDC62_THEAC|ORC1-TYPE DNA replication protein 2|Thermoplasma acidophilum (strain ATCC

Query: 3 MENPFSRL 10
M+NPF+R
Sbjct: 1 MDNPFARF 8


>sp|CDC6_THEVO|ORC1-TYPE DNA replication protein|Thermoplasma volcanium (strain ATCC 51530

Query: 3 MENPFSRL 10
M+NPFS+
Sbjct: 1 MDNPFSKF 8


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 GMENPFSRL 10
G+ENP ++L
Sbjct: 194 GVENPVNKL 202


>sp|Y3226_SACS2|UNCHARACTERIZED aldolase SSO3226|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KGMENP 6
KG+ENP
Sbjct: 32 KGIENP 37


>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain Fusaro

Query: 1 KGMENPFS 8
KG+ NP++
Sbjct: 284 KGLRNPYA 291


>sp|Y1053_ARCFU|UNCHARACTERIZED protein AF_1053|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MENPFSRL 10
+ENPF L
Sbjct: 52 LENPFQNL 59


>sp|RL31_PYRAB|LARGE ribosomal subunit protein eL31|Pyrococcus abyssi (strain GE5 /

Query: 1 KGMENPFSRL 10
+G+E P SRL
Sbjct: 61 RGIEKPPSRL 70




258|SequenceR|1295|1286|WIKSLKGMEN

>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 2 IKSLKGMEN 10
IKSLKG EN
Sbjct: 277 IKSLKGNEN 285


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IKSLKGMEN 10
IKSL+GM++
Sbjct: 220 IKSLRGMKS 228


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 WIKSLKGME 9
W+K + GM+
Sbjct: 123 WLKEITGMD 131


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 WIKSLKG 7
WIK +KG
Sbjct: 323 WIKEIKG 329


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 WIKSLKGME 9
W+K + GM+
Sbjct: 123 WLKEITGMD 131


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 WIKSLKGME 9
W+K + GM+
Sbjct: 123 WLKEITGMD 131


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 WIKSLKGME 9
W+K + GM+
Sbjct: 123 WLKEITGMD 131


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 1 WIKSLKGME 9
WI S+KG E
Sbjct: 76 WITSIKGKE 84


>sp|TRUB_HALSA|PROBABLE tRNA pseudouridine synthase B|Halobacterium salinarum (strain

Query: 1 WIKSLKGME 9
WI+ L G+E
Sbjct: 37 WIRDLVGVE 45


>sp|TRUB_HALS3|PROBABLE tRNA pseudouridine synthase B|Halobacterium salinarum (strain

Query: 1 WIKSLKGME 9
WI+ L G+E
Sbjct: 37 WIRDLVGVE 45


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 WIKSLKGME 9
W+K + GM+
Sbjct: 123 WLKEITGMD 131


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 WIKSLKGME 9
W+K + GM+
Sbjct: 123 WLKEITGMD 131


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 LKGMEN 10
LKGMEN
Sbjct: 278 LKGMEN 283


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 WIKSLKGMEN 10
WI++ +GM++
Sbjct: 349 WIRTPEGMDS 358


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 1 WIKSLKGME 9
W+K + G+E
Sbjct: 54 WVKKILGVE 62


>sp|NADM_PYRHO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WIKSLKGME 9
+IK +KG+E
Sbjct: 153 YIKEIKGVE 161


>sp|NADM_PYRAB|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 WIKSLKGME 9
+IK +KG+E
Sbjct: 153 YIKEIKGVE 161


>sp|TRUB_PYRNV|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum neutrophilum (strain

Query: 1 WIKSLKGME 9
W+K + G+E
Sbjct: 54 WVKKILGVE 62


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain

Query: 1 WIKSLKGME 9
W+K + G+E
Sbjct: 54 WVKKILGVE 62


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 KSLKGMEN 10
K++KG+EN
Sbjct: 135 KNIKGLEN 142


>sp|TRUB_PYRIL|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum islandicum (strain DSM

Query: 1 WIKSLKGME 9
W+K + G+E
Sbjct: 54 WVKKILGVE 62


>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 1 WIKSLKGME 9
W+K + G+E
Sbjct: 54 WVKKILGVE 62


>sp|REG5_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1055|Pyrococcus horikoshii

Query: 3 KSLKGME 9
KSLKG+E
Sbjct: 144 KSLKGLE 150




259|SequenceR|1300|1291|DLPLDWIKSL

>sp|KTHY_METMA|PROBABLE thymidylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PLDWIKSL 10
PL+W++SL
Sbjct: 113 PLEWVRSL 120


>sp|RS15_METAR|SMALL ribosomal subunit protein uS15|Methanocella arvoryzae (strain DSM

Query: 2 LPLDWIKS 9
LP+DW+ S
Sbjct: 135 LPMDWVYS 142


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 1 DLPLDWIKSL 10
D+PLD +KS
Sbjct: 41 DVPLDLVKSF 50


>sp|KTHY_METAC|PROBABLE thymidylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLPLDWIKSL 10
D PL+W++ L
Sbjct: 111 DNPLEWVRDL 120


>sp|KTHY_METBF|PROBABLE thymidylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PLDWIKSL 10
PL+W+K L
Sbjct: 113 PLEWVKDL 120


>sp|MOBA_PYRAB|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus abyssi (strain

Query: 1 DLPLDWIKSL 10
DLPL W +S
Sbjct: 168 DLPLGWRESF 177


>sp|MOBA_THESM|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus sibiricus

Query: 2 LPLDWIKSL 10
LPL+W +SL
Sbjct: 169 LPLEWQESL 177


>sp|DPCKG_PYRAE|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LPLDWIK 8
LP+DW K
Sbjct: 121 LPVDWYK 127


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PLDWIKSL 10
P DWI SL
Sbjct: 342 PYDWIPSL 349


>sp|FENR_IGNH4|FERREDOXIN--NADP reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 LDWIKSL 10
L+W+KSL
Sbjct: 241 LEWVKSL 247


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LDWIKSL 10
+DWIKSL
Sbjct: 385 IDWIKSL 391


>sp|RS5_STAMF|SMALL ribosomal subunit protein uS5|Staphylothermus marinus (strain ATCC

Query: 3 PLDWIKS 9
P+DW+K+
Sbjct: 208 PVDWLKA 214


>sp|NPPNK_METJA|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanocaldococcus jannaschii (strain

Query: 4 LDWIKSL 10
+DWIKS
Sbjct: 126 IDWIKSF 132


>sp|MCRG_METVA|METHYL-COENZYME M reductase subunit gamma|Methanococcus vannielii

Query: 1 DLPLDWIKSL 10
D+P D+++ L
Sbjct: 63 DMPADYVRDL 72


>sp|MTNA_PYRAB|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus abyssi (strain

Query: 3 PLDWIKSL 10
PLD IKSL
Sbjct: 124 PLDEIKSL 131


>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 3 PLDWIKS 9
PLDW ++
Sbjct: 207 PLDWART 213


>sp|OGT_METBF|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DLPLDWIKS 9
++P DWI++
Sbjct: 35 EIPADWIEN 43


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 DLPLDW 6
DLP DW
Sbjct: 729 DLPDDW 734


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 DLPLDWIKSL 10
D P DWI +
Sbjct: 226 DSPRDWIDHM 235


>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 4 LDWIKSL 10
+DWIKS+
Sbjct: 317 VDWIKSI 323


>sp|FLUC_THEON|FLUORIDE-SPECIFIC ion channel FluC|Thermococcus onnurineus (strain NA1)

Query: 1 DLPLDW 6
D+P DW
Sbjct: 60 DVPADW 65


>sp|MCRG_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DLPLDWIKSL 10
DLP D+++ L
Sbjct: 63 DLPEDYVRDL 72


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 DWIKSL 10
DWIKSL
Sbjct: 404 DWIKSL 409


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DLPLDWIKSL 10
D P +W+++L
Sbjct: 53 DFPKEWLQAL 62


>sp|RUBR_PYRAB|RUBREDOXIN abyssi (strain GE5 /

Query: 1 DLPLDWIKSL 10
DLP DW+ L
Sbjct: 32 DLPDDWVCPL 41


>sp|TRUA_METTP|TRNA pseudouridine synthase A|Methanothrix thermoacetophila (strain DSM

Query: 3 PLDWIKSL 10
P+DWI L
Sbjct: 192 PVDWILEL 199


>sp|RS15_METBU|SMALL ribosomal subunit protein uS15|Methanococcoides burtonii (strain

Query: 2 LPLDW 6
LP+DW
Sbjct: 135 LPIDW 139




260|SequenceR|1305|1296|NLHLEDLPLD

>sp|MTRA1_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanothermobacter marburgensis

Query: 3 HLEDLPLD 10
H+ED+P++
Sbjct: 35 HIEDIPVE 42


>sp|PDXS_NATPD|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Natronomonas pharaonis (strain

Query: 2 LHLEDLPLD 10
+HLE +P D
Sbjct: 50 MHLESVPAD 58


>sp|PDXS_HALMA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloarcula marismortui (strain

Query: 2 LHLEDLPLD 10
+HLE +P D
Sbjct: 51 MHLESVPAD 59


>sp|MTRA1_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanothermobacter

Query: 3 HLEDLPLD 10
H+ED+P++
Sbjct: 35 HIEDVPVE 42


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLHLEDLPLD 10
N+H ED+ LD
Sbjct: 32 NIHQEDIILD 41


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 EDLPLD 10
EDLPLD
Sbjct: 441 EDLPLD 446


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LHLEDLPLD 10
+ ++DLPLD
Sbjct: 4 ISIDDLPLD 12


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 EDLPLD 10
EDLP+D
Sbjct: 425 EDLPID 430


>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 1 NLHLEDLPLD 10
NL++ +PLD
Sbjct: 91 NLYVAHIPLD 100


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EDLPLD 10
EDLP+D
Sbjct: 424 EDLPID 429


>sp|SFSA_PYRIL|SUGAR fermentation stimulation protein homolog|Pyrobaculum islandicum

Query: 3 HLEDLPLD 10
++E+LP+D
Sbjct: 220 YIEELPID 227


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LEDLPLD 10
+EDLP+D
Sbjct: 6 VEDLPVD 12


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NLHLEDLPLD 10
N+H+ + PLD
Sbjct: 412 NIHVPENPLD 421


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 EDLPLD 10
EDLP+D
Sbjct: 467 EDLPID 472


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LHLEDL 7
LHLEDL
Sbjct: 267 LHLEDL 272


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 1 NLHLEDLP 8
N HLE++P
Sbjct: 266 NEHLEEIP 273




261|SequenceR|1310|1301|HKFDFNLHLE

>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 3 FDFNLHL 9
F+FNLHL
Sbjct: 192 FEFNLHL 198


>sp|Y1109_METTH|PUTATIVE nickel insertion protein|Methanothermobacter thermautotrophicus

Query: 3 FDFNLH 8
FD NLH
Sbjct: 141 FDLNLH 146


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 DFNLHLE 10
DFNL+LE
Sbjct: 876 DFNLYLE 882


>sp|Y1284_METJA|UNCHARACTERIZED protein MJ1284|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HKFDFNLHLE 10
FD+NL LE
Sbjct: 32 QNFDYNLSLE 41


>sp|MFNA_METJA|L-TYROSINE/L-ASPARTATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HKFDFNLHLE 10
+KFDF+L ++
Sbjct: 228 YKFDFSLGVD 237


>sp|COFC_METRM|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 3 FDFNLHLE 10
F FN H+E
Sbjct: 163 FSFNKHIE 170


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KFDFNLHLE 10
KFD NL+++
Sbjct: 103 KFDVNLYIQ 111




262|SequenceR|1315|1306|AKCGIHKFDF

>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 1 AKCGIHKFD 9
+ C IHK D
Sbjct: 97 SNCAIHKMD 105


>sp|CDPAS_STAMF|CDP-ARCHAEOL synthase|Staphylothermus marinus (strain ATCC 43588

Query: 4 GIHKFDF 10
GIH+ DF
Sbjct: 35 GIHRIDF 41


>sp|FEN_METST|FLAP endonuclease 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 CGIHKFD 9
CG H FD
Sbjct: 298 CGEHDFD 304


>sp|MCH_METBF|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GIHKFD 9
GIHKF+
Sbjct: 188 GIHKFE 193


>sp|MCH_METAC|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GIHKFD 9
GIHKF+
Sbjct: 188 GIHKFE 193


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 4 GIHKFDF 10
G++K+DF
Sbjct: 300 GVYKYDF 306


>sp|MCH_METMA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GIHKFD 9
GIHKF+
Sbjct: 188 GIHKFE 193


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AKCGIHKFD 9
A CG H F+
Sbjct: 223 AACGPHDFE 231


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 3 CGIHKFDF 10
CG+ F+F
Sbjct: 657 CGVEGFEF 664


>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 1 AKCGIHKFD 9
+ GIHK D
Sbjct: 113 GEAGIHKMD 121


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AKCGIHKFD 9
+ GIHK D
Sbjct: 113 GEAGIHKMD 121


>sp|DADD_METMA|5'-DEOXYADENOSINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AKCGIHKFD 9
KC +H D
Sbjct: 227 GKCSVHMLD 235


>sp|UDGA_PYRAE|TYPE-4 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KCGIHKF 8
KC +HK+
Sbjct: 15 KCPLHKY 21


>sp|HYPA_THEKO|HYDROGENASE maturation factor HypA|Thermococcus kodakarensis (strain ATCC

Query: 2 KCGIHKFD 9
KCG H F+
Sbjct: 112 KCGSHDFE 119


>sp|HYPA_THEGJ|HYDROGENASE maturation factor HypA|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KCGIHKFD 9
KCG H F+
Sbjct: 112 KCGSHDFE 119


>sp|HYPA_PYRFU|HYDROGENASE maturation factor HypA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KCGIHKFD 9
KCG H F+
Sbjct: 112 KCGSHDFE 119




263|SequenceR|1320|1311|RIIDKAKCGI

>sp|Y120_METTH|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase|Methanothermobacter

Query: 1 RIIDKAKCG 9
+I+D A CG
Sbjct: 50 KILDAAMCG 58


>sp|Y1008_CALMQ|UPF0179 protein Cmaq_1008|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RIIDKAKCG 9
++ID+ +CG
Sbjct: 120 KVIDRRQCG 128


>sp|RL34_META3|LARGE ribosomal subunit protein eL34|Methanococcus aeolicus (strain

Query: 3 IDKAKCG 9
+ KAKCG
Sbjct: 32 VSKAKCG 38




264|SequenceR|1325|1316|RQQLFRIIDK

>sp|PUR5_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 QQLFRII 8
QQ+FR+I
Sbjct: 267 QQIFRVI 273


>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 1 RQQLFRIID 9
+++LF++ID
Sbjct: 122 KEELFKLID 130


>sp|XACR_HALVD|HTH-TYPE transcriptional regulator XacR|Haloferax volcanii (strain ATCC

Query: 1 RQQLFRIID 9
RQ+LF++++
Sbjct: 172 RQELFQVLE 180


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RQQLFRIIDK 10
R+ +FR ID+
Sbjct: 125 RESIFRYIDE 134




265|SequenceR|1330|1321|VAKKLRQQLF

>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 1 VAKKLRQQLF 10
V KKL QQ F
Sbjct: 276 VEKKLMQQFF 285


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VAKKLRQQLF 10
++++LR+Q+F
Sbjct: 476 LSRRLREQIF 485


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 VAKKLRQQLF 10
++++LR+Q+F
Sbjct: 473 LSRRLREQIF 482


>sp|SPT4_THEKO|TRANSCRIPTION elongation factor Spt4|Thermococcus kodakarensis (strain ATCC

Query: 1 VAKKLRQQL 9
+AKKLR+ +
Sbjct: 44 IAKKLRESI 52




266|SequenceR|1335|1326|MRNYPVAKKL

>sp|RL39_THESM|LARGE ribosomal subunit protein eL39|Thermococcus sibiricus (strain DSM

Query: 2 RNYPVAKKL 10
RN P+AKKL
Sbjct: 3 RNKPIAKKL 11


>sp|HPRT_METRM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanobrevibacter ruminantium (strain

Query: 1 MRNYPVAKK 9
+RN PV KK
Sbjct: 9 LRNAPVVKK 17


>sp|HIS8_HALWD|HISTIDINOL-PHOSPHATE aminotransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 MRNYPVAKK 9
+R YPV+K+
Sbjct: 130 IRTYPVSKE 138


>sp|RL39_THEON|LARGE ribosomal subunit protein eL39|Thermococcus onnurineus (strain

Query: 2 RNYPVAKKL 10
RN P+AKKL
Sbjct: 3 RNKPLAKKL 11


>sp|RL39_THEGJ|LARGE ribosomal subunit protein eL39|Thermococcus gammatolerans (strain

Query: 2 RNYPVAKKL 10
RN P+AKKL
Sbjct: 3 RNKPLAKKL 11


>sp|RL39_PYRHO|LARGE ribosomal subunit protein eL39|Pyrococcus horikoshii (strain ATCC

Query: 2 RNYPVAKKL 10
RN P+AKKL
Sbjct: 3 RNKPLAKKL 11


>sp|RL39_PYRAB|LARGE ribosomal subunit protein eL39|Pyrococcus abyssi (strain GE5 /

Query: 2 RNYPVAKKL 10
RN P+AKKL
Sbjct: 3 RNKPLAKKL 11


>sp|RL39_PYRFU|LARGE ribosomal subunit protein eL39|Pyrococcus furiosus (strain ATCC

Query: 2 RNYPVAKKL 10
RN P+AKKL
Sbjct: 3 RNKPLAKKL 11


>sp|RL39_METS3|LARGE ribosomal subunit protein eL39|Methanobrevibacter smithii (strain

Query: 2 RNYPVAKKL 10
RN P+AKKL
Sbjct: 3 RNKPLAKKL 11


>sp|RL39_SACI1|LARGE ribosomal subunit protein eL39|Saccharolobus islandicus (strain

Query: 2 RNYPVAKKL 10
RN PVAKK
Sbjct: 3 RNKPVAKKF 11


>sp|RL39_SACS2|LARGE ribosomal subunit protein eL39|Saccharolobus solfataricus (strain

Query: 2 RNYPVAKKL 10
RN PVAKK
Sbjct: 3 RNKPVAKKF 11


>sp|RL39_SACI7|LARGE ribosomal subunit protein eL39|Saccharolobus islandicus (strain

Query: 2 RNYPVAKKL 10
RN PVAKK
Sbjct: 3 RNKPVAKKF 11


>sp|RL39_SACI6|LARGE ribosomal subunit protein eL39|Saccharolobus islandicus (strain

Query: 2 RNYPVAKKL 10
RN PVAKK
Sbjct: 3 RNKPVAKKF 11


>sp|RL39_SACI4|LARGE ribosomal subunit protein eL39|Saccharolobus islandicus (strain

Query: 2 RNYPVAKKL 10
RN PVAKK
Sbjct: 3 RNKPVAKKF 11


>sp|RL39_SACI3|LARGE ribosomal subunit protein eL39|Saccharolobus islandicus (strain

Query: 2 RNYPVAKKL 10
RN PVAKK
Sbjct: 3 RNKPVAKKF 11


>sp|RL39_SACI2|LARGE ribosomal subunit protein eL39|Saccharolobus islandicus (strain

Query: 2 RNYPVAKKL 10
RN PVAKK
Sbjct: 3 RNKPVAKKF 11


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 MRNYPVAKKL 10
MR PV KK+
Sbjct: 502 MRRRPVVKKI 511


>sp|RL39_THEKO|LARGE ribosomal subunit protein eL39|Thermococcus kodakarensis (strain

Query: 2 RNYPVAKKL 10
RN P AKKL
Sbjct: 3 RNKPFAKKL 11


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RNYPVAKKL 10
R YP AK L
Sbjct: 400 RKYPTAKGL 408


>sp|RL39_STAMF|LARGE ribosomal subunit protein eL39|Staphylothermus marinus (strain

Query: 2 RNYPVAKKL 10
RN P+A+KL
Sbjct: 3 RNKPLARKL 11


>sp|RL10E_METMA|LARGE ribosomal subunit protein uL16|Methanosarcina mazei (strain ATCC

Query: 2 RNYPVAKK 9
+N+P AKK
Sbjct: 141 QNFPAAKK 148


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 4 YPVAKKL 10
YP+A+KL
Sbjct: 308 YPIARKL 314


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RNYPVAK 8
+NYP+A+
Sbjct: 825 KNYPIAR 831


>sp|RL39_PYRAR|LARGE ribosomal subunit protein eL39|Pyrobaculum arsenaticum (strain

Query: 2 RNYPVAKKL 10
RN P+ KKL
Sbjct: 3 RNKPLGKKL 11


>sp|RL39_PYRCJ|LARGE ribosomal subunit protein eL39|Pyrobaculum calidifontis (strain

Query: 2 RNYPVAKKL 10
RN P+ KKL
Sbjct: 3 RNKPLGKKL 11


>sp|RL39_PYRIL|LARGE ribosomal subunit protein eL39|Pyrobaculum islandicum (strain DSM

Query: 2 RNYPVAKKL 10
RN P+ KKL
Sbjct: 3 RNKPLGKKL 11




267|SequenceR|1340|1331|VIMLKMRNYP

>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 2 IMLKMRNYP 10
+ LKM+NYP
Sbjct: 624 LKLKMKNYP 632


>sp|RL24_NANEQ|LARGE ribosomal subunit protein uL24|Nanoarchaeum equitans (strain

Query: 3 MLKMRNY 9
MLK+RNY
Sbjct: 1 MLKIRNY 7


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 1 VIMLKMRNYP 10
+I+LK RN P
Sbjct: 119 LILLKSRNIP 128


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 1 VIMLKMRNYP 10
VIM+K+R P
Sbjct: 134 VIMVKIRKKP 143


>sp|RL10E_METHJ|LARGE ribosomal subunit protein uL16|Methanospirillum hungatei JF-1

Query: 4 LKMRNYP 10
LK+R YP
Sbjct: 84 LKLRTYP 90




268|SequenceR|1345|1336|SGTNGVIMLK

>sp|KPRS1_ARCFU|RIBOSE-PHOSPHATE pyrophosphokinase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GTNGVIMLK 10
GTNG++ LK
Sbjct: 7 GTNGLMALK 15


>sp|LYSK_PYRHO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus horikoshii

Query: 1 SGTNGVIM 8
SGTNGV +
Sbjct: 141 SGTNGVTI 148


>sp|RL2_CALMQ|LARGE ribosomal subunit protein uL2|Caldivirga maquilingensis (strain

Query: 1 SGTNGVIML 9
SGT GV+M+
Sbjct: 126 SGTYGVVMI 134


>sp|LYSK_PYRFU|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus furiosus

Query: 1 SGTNGVIM 8
SGTNGV +
Sbjct: 141 SGTNGVTI 148


>sp|RRP4_METTH|EXOSOME complex component Rrp4|Methanothermobacter thermautotrophicus

Query: 2 GTNGVIMLK 10
G NGV+ +K
Sbjct: 176 GQNGVVWIK 184




269|SequenceR|1350|1341|LTTKGSGTNG

>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain NA1)

Query: 3 TKGSGTNG 10
TKG GT G
Sbjct: 205 TKGKGTQG 212


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 3 TKGSGTNG 10
TKG GT G
Sbjct: 205 TKGKGTQG 212


>sp|RL3_THEGJ|LARGE ribosomal subunit protein uL3|Thermococcus gammatolerans (strain

Query: 3 TKGSGTNG 10
TKG GT G
Sbjct: 205 TKGKGTQG 212


>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 3 TKGSGTNG 10
TKG GT G
Sbjct: 225 TKGKGTQG 232


>sp|RL3_PYRAB|LARGE ribosomal subunit protein uL3|Pyrococcus abyssi (strain GE5 /

Query: 3 TKGSGTNG 10
TKG GT G
Sbjct: 222 TKGKGTQG 229


>sp|RL3_THESM|LARGE ribosomal subunit protein uL3|Thermococcus sibiricus (strain DSM

Query: 3 TKGSGTNG 10
TKG GT G
Sbjct: 220 TKGKGTQG 227


>sp|RL3_METHJ|LARGE ribosomal subunit protein uL3|Methanospirillum hungatei JF-1

Query: 3 TKGSGTNG 10
TKG GT G
Sbjct: 205 TKGKGTQG 212


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 3 TKGSGTNG 10
TKG GT G
Sbjct: 223 TKGKGTQG 230


>sp|RL3_CALMQ|LARGE ribosomal subunit protein uL3|Caldivirga maquilingensis (strain

Query: 3 TKGSGTNG 10
TKG GT G
Sbjct: 211 TKGKGTQG 218


>sp|RL3_METTP|LARGE ribosomal subunit protein uL3|Methanothrix thermoacetophila (strain

Query: 3 TKGSGTNG 10
TKG GT G
Sbjct: 201 TKGKGTQG 208




270|SequenceR|1355|1346|MLQQLLTTKG

>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 1 MLQQLLT 7
MLQQLLT
Sbjct: 284 MLQQLLT 290




271|SequenceR|1360|1351|SKKTKMLQQL

***** No hits found ******


272|SequenceR|1365|1356|QMGLDSKKTK

>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 MGLDSKKTK 10
MGLD KT+
Sbjct: 100 MGLDPNKTE 108


>sp|LIVH_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 2 MGLDSKKTK 10
MG+D +KT+
Sbjct: 192 MGIDVEKTR 200


>sp|Y876_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 3 GLDSKKTK 10
GLD KKT+
Sbjct: 233 GLDIKKTR 240


>sp|NAC_META3|NASCENT polypeptide-associated complex protein|Methanococcus aeolicus

Query: 2 MGLDSKKTK 10
MG+DSK K
Sbjct: 21 MGMDSKDIK 29




273|SequenceR|1370|1361|GVTASQMGLD

>sp|G1PDH_METM6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C6 /

Query: 2 VTASQMGLD 10
VTA Q+G D
Sbjct: 286 VTAEQLGFD 294


>sp|G1PDH_METM7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C7 /

Query: 2 VTASQMGLD 10
VTA Q+G D
Sbjct: 286 VTAKQLGFD 294


>sp|G1PDH_METMP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain DSM 14266

Query: 2 VTASQMGLD 10
VTA Q+G D
Sbjct: 286 VTAKQLGFD 294


>sp|HTPX_PYRCJ|PROTEASE HtpX homolog|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GVTASQMGL 9
GVTA MGL
Sbjct: 199 GVTAVHMGL 207


>sp|G1PDH_METM5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C5 /

Query: 2 VTASQMGLD 10
+TA Q+G D
Sbjct: 286 ITAKQLGFD 294


>sp|PCNA_METPE|DNA polymerase sliding clamp|Methanosphaerula palustris (strain ATCC

Query: 3 TASQMGLD 10
T+S+MG+D
Sbjct: 62 TSSEMGID 69


>sp|GGGPS_PYRAR|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GVTASQM 7
G+TASQM
Sbjct: 47 GITASQM 53




274|SequenceR|1375|1366|DKVDIGVTAS

>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 DKVDIG 6
DKVDIG
Sbjct: 248 DKVDIG 253


>sp|Y1253_SACS2|PUTATIVE esterase SSO1253|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DKVDIGVTA 9
DKV GVTA
Sbjct: 78 DKVKDGVTA 86


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 DKVDIG 6
DK+DIG
Sbjct: 65 DKIDIG 70




275|SequenceR|1380|1371|IQIPWDKVDI

>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium

Query: 2 QIPWDKVDI 10
Q+PWD +D+
Sbjct: 86 QLPWDDLDV 94


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IQIPWDK 7
I IPWDK
Sbjct: 186 IHIPWDK 192


>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 IQIPWDKVD 9
I+IPW++ D
Sbjct: 204 IEIPWEERD 212


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 1 IQIPWDKV 8
+++PWD V
Sbjct: 74 VEVPWDNV 81


>sp|GLNA_PYRHO|GLUTAMINE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IQIPWDKV 8
+++PWD V
Sbjct: 78 VEVPWDNV 85


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 IQIPWDKV 8
+++PWD V
Sbjct: 74 VEVPWDNV 81


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 5 WDKVDI 10
WDKVDI
Sbjct: 247 WDKVDI 252


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IQIPWDKV 8
+++PWD V
Sbjct: 74 VEVPWDNV 81


>sp|HLY_NATA1|HALOLYSIN asiatica (strain ATCC 700177

Query: 3 IPWDKVD 9
IPWD D
Sbjct: 339 IPWDNYD 345


>sp|ENGB_PYRAB|PROBABLE GTP-binding protein EngB|Pyrococcus abyssi (strain GE5 /

Query: 1 IQIPWDKVD 9
++PWD++D
Sbjct: 170 FEVPWDEID 178


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 IQIPWDK 7
+++PWD+
Sbjct: 181 VEVPWDE 187


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 IQIPWDK 7
+++PWD+
Sbjct: 183 VEVPWDE 189


>sp|OGT_SACS2|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IQIPWDKV 8
++IPW KV
Sbjct: 80 MKIPWGKV 87


>sp|OGT_SACI7|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IQIPWDKV 8
++IPW KV
Sbjct: 80 MKIPWGKV 87


>sp|OGT_SACI6|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IQIPWDKV 8
++IPW KV
Sbjct: 80 MKIPWGKV 87


>sp|OGT_SACI4|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IQIPWDKV 8
++IPW KV
Sbjct: 80 MKIPWGKV 87


>sp|OGT_SACI2|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IQIPWDKV 8
++IPW KV
Sbjct: 80 MKIPWGKV 87


>sp|OGT_SACI3|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 IQIPWDKV 8
++IPW KV
Sbjct: 80 MRIPWGKV 87


>sp|OGT_SACI1|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IQIPWDKV 8
++IPW KV
Sbjct: 80 MKIPWGKV 87


>sp|HIS5_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 2 QIPWDKVDI 10
I WDKV++
Sbjct: 114 HIGWDKVNV 122


>sp|METE_THEKO|METHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IQIPWD 6
I IPWD
Sbjct: 57 IDIPWD 62


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 2 QIPWD 6
Q+PWD
Sbjct: 112 QVPWD 116


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QIPWDK 7
+IPWDK
Sbjct: 504 RIPWDK 509


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 IQIPWD 6
+++PWD
Sbjct: 138 VELPWD 143


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IQIPWD 6
+++PWD
Sbjct: 138 VELPWD 143


>sp|GLYA_PYRCJ|SERINE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IQIPWD 6
+++PWD
Sbjct: 138 VELPWD 143


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IQIPWD 6
+++PWD
Sbjct: 138 VELPWD 143


>sp|GLYA_PYRAE|SERINE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IQIPWD 6
+++PWD
Sbjct: 138 VELPWD 143


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 IPWDKVDI 10
IP DK+D+
Sbjct: 69 IPLDKIDL 76


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 IPWDKV 8
+PWDK+
Sbjct: 1447 LPWDKL 1452


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 PWDKV 8
PWDKV
Sbjct: 464 PWDKV 468


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IQIPWDKV 8
++IPW+++
Sbjct: 232 LKIPWEEI 239


>sp|METE_PYRFU|METHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IQIPWD 6
I IPWD
Sbjct: 57 IDIPWD 62


>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 PWDKVDI 10
PW KV++
Sbjct: 127 PWAKVEV 133


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QIPWDKVDI 10
+IP++K+DI
Sbjct: 530 RIPFEKLDI 538


>sp|SFSA_METBU|SUGAR fermentation stimulation protein homolog|Methanococcoides

Query: 1 IQIPWD 6
++IPWD
Sbjct: 8 MEIPWD 13


>sp|RTCA_THEGJ|RNA 3'-terminal phosphate cyclase|Thermococcus gammatolerans (strain

Query: 1 IQIPWDKVD 9
+ + W+KVD
Sbjct: 178 VALEWNKVD 186


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PWDKVDI 10
PW K+DI
Sbjct: 634 PWQKLDI 640


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 PWDKV 8
PWDK+
Sbjct: 463 PWDKI 467


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 2 QIPWDKVDI 10
++ W+K+DI
Sbjct: 58 ELKWNKIDI 66


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 3 IPWDKVDI 10
I W KVD+
Sbjct: 171 ITWKKVDL 178


>sp|METE_PYRHO|METHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IQIPWD 6
+ IPWD
Sbjct: 57 VDIPWD 62


>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 2 QIPWDKVDI 10
++ W+K+DI
Sbjct: 58 ELKWNKIDI 66


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PWDKV 8
PWDKV
Sbjct: 60 PWDKV 64


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PWDKV 8
PWDKV
Sbjct: 60 PWDKV 64


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 IQIPWD 6
+ IPWD
Sbjct: 57 VDIPWD 62


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IQIPWDK 7
+Q+PW K
Sbjct: 331 LQLPWHK 337


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 5 WDKVDI 10
WDKV+I
Sbjct: 720 WDKVEI 725




276|SequenceR|1385|1376|KRKDRIQIPW

>sp|KAE1_SULAC|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfolobus acidocaldarius

Query: 2 RKDRIQIPW 10
R D++ IPW
Sbjct: 323 RIDKVDIPW 331


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 1 KRKDRIQIP 9
+R DRI+IP
Sbjct: 411 RRLDRIKIP 419


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 RKDRIQIPW 10
+KDR+++ W
Sbjct: 263 QKDRVKVIW 271


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 DRIQIPW 10
DR++I W
Sbjct: 33 DRVEIDW 39


>sp|KAE1B_METLZ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 RKDRIQIPW 10
R D++++ W
Sbjct: 314 RSDQVEVTW 322


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RKDRIQIPW 10
+K RIQ+ W
Sbjct: 354 KKKRIQVIW 362




277|SequenceR|1390|1381|LVLDRKRKDR

>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VLDRKRKDR 10
+LD K KDR
Sbjct: 464 ILDEKFKDR 472


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 3 LDRKRK 8
LDRKRK
Sbjct: 74 LDRKRK 79


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 3 LDRKRK 8
LDRKRK
Sbjct: 74 LDRKRK 79




278|SequenceR|1395|1386|FDWVNLVLDR

>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 DWVNLV 7
DWVNLV
Sbjct: 274 DWVNLV 279


>sp|DHQS_METJA|3-DEHYDROQUINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDWVNLVLD 9
F WVN++ D
Sbjct: 3 FGWVNVIGD 11


>sp|PMDHL_METTH|PHOSPHOMEVALONATE dehydratase large subunit|Methanothermobacter thermautotrophicus

Query: 2 DWVNLV 7
DW+NL+
Sbjct: 392 DWMNLI 397


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 2 DWVNLVLD 9
D VNLVLD
Sbjct: 231 DAVNLVLD 238


>sp|COMB_METJA|2-PHOSPHOSULFOLACTATE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DWVNLVLD 9
DW++L+L+
Sbjct: 175 DWMSLILN 182


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 2 DWVNLVLD 9
D++N VLD
Sbjct: 148 DYINAVLD 155


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 2 DWVNLVLDR 10
DW + +LDR
Sbjct: 52 DWDHNILDR 60


>sp|Y1056_PYRHO|PROBABLE S-adenosyl-L-methionine-binding protein PH1056|Pyrococcus

Query: 2 DWVNLVL 8
DW+ L+L
Sbjct: 39 DWIKLIL 45


>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FDWVNLV 7
F WVN++
Sbjct: 296 FSWVNML 302


>sp|WECBH_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase homolog|Methanococcus maripaludis (strain DSM 14266

Query: 2 DWVNLVLD 9
+WV VLD
Sbjct: 303 EWVETVLD 310




279|SequenceR|1400|1391|EERGAFDWVN

>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ERGAFDWVN 10
E GAFD +N
Sbjct: 39 EEGAFDAIN 47


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 3 RGAFDWVN 10
R AFDW +
Sbjct: 427 REAFDWAH 434




280|SequenceR|1405|1396|HTSYFEERGA

>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 TSYFEERG 9
T++F+ERG
Sbjct: 69 TNFFDERG 76


>sp|HIS1_IGNH4|ATP phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 TSYFEERG 9
T YFE++G
Sbjct: 123 TDYFEKKG 130


>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YFEERG 9
YFEE+G
Sbjct: 69 YFEEKG 74


>sp|HIS4_METBU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcoides burtonii (strain

Query: 3 SYFEERGA 10
S FEE+GA
Sbjct: 159 SQFEEKGA 166


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HTSYFEERG 9
+ S+FEE+G
Sbjct: 67 YLSFFEEKG 75


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HTSYFE 6
H SYFE
Sbjct: 350 HASYFE 355


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 SYFEERG 9
S+FE+RG
Sbjct: 73 SFFEKRG 79


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SYFEERG 9
S+FE+RG
Sbjct: 71 SFFEKRG 77


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 SYFEERG 9
S+FE+RG
Sbjct: 71 SFFEKRG 77


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 SYFEERG 9
S+FE+RG
Sbjct: 71 SFFEKRG 77


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 4 YFEERG 9
YF+ERG
Sbjct: 224 YFKERG 229


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 SYFEERG 9
S+FE+RG
Sbjct: 71 SFFEKRG 77


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 SYFEERG 9
S+FE+RG
Sbjct: 71 SFFEKRG 77


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 SYFEERG 9
S+FE+RG
Sbjct: 71 SFFEKRG 77


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 SYFEERG 9
S+FE+RG
Sbjct: 71 SFFEKRG 77


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 1 HTSYFEER 8
HT Y +ER
Sbjct: 141 HTRYLQER 148


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 TSYFEERG 9
T++F+E+G
Sbjct: 69 TNFFDEKG 76


>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 1 HTSYFEERGA 10
H SYFE+ A
Sbjct: 24 HVSYFEKHVA 33


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain ATCC

Query: 3 SYFEERG 9
SYFEE G
Sbjct: 468 SYFEEDG 474


>sp|GLMS_PYRAE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrobaculum aerophilum (strain ATCC

Query: 1 HTSYFEERGA 10
H++Y+ RGA
Sbjct: 460 HSAYYLGRGA 469


>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 TSYFEERG 9
T Y+ ERG
Sbjct: 89 TGYYPERG 96




281|SequenceR|1410|1401|TMFHPHTSYF

>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FHPHTSYF 10
FHP+ SY+
Sbjct: 63 FHPYASYY 70


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TMFHPHTSY 9
T F PHT+Y
Sbjct: 259 TNFKPHTAY 267


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TMFHPHTSYF 10
+ + PH SYF
Sbjct: 345 STYDPHASYF 354


>sp|BTUDA_HALSA|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 4 HPHTSYF 10
HPHT+ F
Sbjct: 102 HPHTTRF 108


>sp|BTUDA_HALS3|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 4 HPHTSYF 10
HPHT+ F
Sbjct: 102 HPHTTRF 108


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MFHPHTSYF 10
+FHP SY+
Sbjct: 253 VFHPIMSYY 261


>sp|SYR_HALLT|ARGININE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 FHPHTSYF 10
FHP YF
Sbjct: 87 FHPGERYF 94


>sp|THPR_AERPE|RNA 2',3'-cyclic phosphodiesterase|Aeropyrum pernix (strain ATCC 700893

Query: 3 FHPHTS 8
FHPH +
Sbjct: 110 FHPHVT 115


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain

Query: 3 FHPHTS 8
FHPH +
Sbjct: 75 FHPHAT 80


>sp|GPMI_HALMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloarcula marismortui (strain ATCC 43049

Query: 4 HPHTSYF 10
+PH +YF
Sbjct: 342 YPHVTYF 348


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 MFHPHTS 8
+FH HTS
Sbjct: 338 VFHAHTS 344


>sp|EF1A_METMA|ELONGATION factor 1-alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 MFHPHTS 8
+FH HTS
Sbjct: 338 VFHAHTS 344


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 MFHPHTS 8
+FH HTS
Sbjct: 338 VFHAHTS 344




282|SequenceR|1415|1406|YLARQTMFHP

>sp|KORB_METTH|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter thermautotrophicus

Query: 1 YLARQTMFHP 10
Y+AR T HP
Sbjct: 171 YVARWTTAHP 180


>sp|KORB_METJA|2-OXOGLUTARATE synthase subunit KorB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YLARQTMFHP 10
Y+AR T HP
Sbjct: 167 YVARWTTAHP 176


>sp|KORB_METTM|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter marburgensis (strain ATCC

Query: 1 YLARQTMFHP 10
Y+AR T HP
Sbjct: 171 YVARWTAAHP 180


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 QTMFHP 10
QTMF+P
Sbjct: 557 QTMFYP 562


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 QTMFHP 10
QTMF+P
Sbjct: 548 QTMFYP 553


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 5 QTMFHP 10
QTMF+P
Sbjct: 553 QTMFYP 558


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 5 QTMFHP 10
QTMF+P
Sbjct: 553 QTMFYP 558


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 QTMFHP 10
QTMF+P
Sbjct: 552 QTMFYP 557


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 QTMFHP 10
QTMF+P
Sbjct: 549 QTMFYP 554




283|SequenceR|1420|1411|DYVALYLARQ

>sp|DNLI_METKA|DNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DYVALYLARQ 10
D VAL+LA Q
Sbjct: 39 DTVALFLANQ 48


>sp|Y1298_METVS|UPF0248 protein Mevan_1298|Methanococcus vannielii (strain ATCC 35089

Query: 1 DYVALYLAR 9
DYV +YL R
Sbjct: 19 DYVIIYLHR 27


>sp|EI2BL_PYRHO|PUTATIVE translation initiation factor eIF-2B|Pyrococcus horikoshii (strain

Query: 1 DYVALYLARQ 10
DY L+LAR+
Sbjct: 146 DYEGLHLARE 155


>sp|G3P_AERPE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DYVALYLARQ 10
DY ALY A +
Sbjct: 39 DYAALYAASR 48


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 1 DYVALYLAR 9
DYV +LAR
Sbjct: 282 DYVTYHLAR 290


>sp|EI2BL_PYRFU|PUTATIVE translation initiation factor eIF-2B|Pyrococcus furiosus (strain

Query: 1 DYVALYLAR 9
DY LYLA+
Sbjct: 146 DYEGLYLAK 154


>sp|OGG1_METTH|PROBABLE N-glycosylase/DNA lyase|Methanothermobacter thermautotrophicus

Query: 1 DYVALYL 7
DYV LYL
Sbjct: 288 DYVQLYL 294


>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 1 DYVALYLA 8
DY+A+Y A
Sbjct: 164 DYMAIYAA 171


>sp|PRIS_PYRAE|DNA primase small subunit PriS|Pyrobaculum aerophilum (strain ATCC

Query: 2 YVALYLARQ 10
YVA+YL Q
Sbjct: 297 YVAIYLELQ 305


>sp|NFI_NANEQ|BIFUNCTIONAL methyltransferase-like/endonuclease|Nanoarchaeum equitans (strain

Query: 1 DYVALYL 7
DY ALY+
Sbjct: 189 DYTALYI 195


>sp|KAE1_NANEQ|TRNA N6-adenosine threonylcarbamoyltransferase|Nanoarchaeum equitans

Query: 1 DYVALYLARQ 10
+Y+A+YL ++
Sbjct: 87 NYIAVYLGKK 96




284|SequenceR|1425|1416|QGKSLDYVAL

>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QGKSLDYV 8
QGK++D+V
Sbjct: 434 QGKTVDWV 441


>sp|Y1003_ARCFU|UNCHARACTERIZED protein AF_1003|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QGKSLDY 7
+GK+LDY
Sbjct: 52 KGKNLDY 58


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 1 QGKSLDYVAL 10
+G S+DY+A+
Sbjct: 124 RGYSVDYLAI 133


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 4 SLDYVAL 10
SLDYVA+
Sbjct: 347 SLDYVAV 353


>sp|CAS5_METJA|CRISPR-ASSOCIATED protein Cas5|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QGKSLDYVA 9
+GKSLD +A
Sbjct: 51 KGKSLDEIA 59


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QGKSLDYVA 9
+GKS+D VA
Sbjct: 431 EGKSVDEVA 439




285|SequenceR|1430|1421|ADVEAQGKSL

>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ADVEAQGKSL 10
AD+E +GK++
Sbjct: 7 ADIETRGKTV 16


>sp|ARCH_METJA|PROTEIN archease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VEAQGKSL 10
VEA+GKSL
Sbjct: 13 VEAKGKSL 20


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DVEAQGKSL 10
DV+ +GK+L
Sbjct: 108 DVDTEGKTL 116


>sp|PHNC1_HALWD|PHOSPHONATES import ATP-binding protein PhnC|Haloquadratum walsbyi (strain DSM

Query: 2 DVEAQGKSL 10
D+E QG+ L
Sbjct: 249 DIEGQGEGL 257


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 DVEAQGKSL 10
DV+ +GK+L
Sbjct: 106 DVDTEGKTL 114


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 2 DVEAQGKS 9
D+EAQG S
Sbjct: 237 DLEAQGAS 244


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 DVEAQGKSL 10
DV+ +GK+L
Sbjct: 106 DVDTEGKTL 114




286|SequenceR|1435|1426|LWPKMADVEA

>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LWPKMADV 8
L PKMADV
Sbjct: 344 LRPKMADV 351


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 WPKMAD 7
WP++AD
Sbjct: 422 WPRLAD 427


>sp|Y425_METJA|UNCHARACTERIZED protein MJ0425|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LWPKMADVE 9
++P MAD+E
Sbjct: 5 VYPNMADLE 13


>sp|Y558_METJA|UNCHARACTERIZED protein MJ0558|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LWPKMAD 7
+WP +AD
Sbjct: 93 IWPAIAD 99


>sp|Y443_METJA|KH domain-containing protein MJ0443|Methanocaldococcus jannaschii

Query: 1 LWPKMADVE 9
LW K +DV+
Sbjct: 193 LWKKKSDVD 201


>sp|Y1331_ARCFU|UNCHARACTERIZED protein AF_1331|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WPKMADVE 9
W K+A+VE
Sbjct: 193 WKKLAEVE 200


>sp|KADL_METTH|ADENYLATE kinase homolog MTH_1663|Methanothermobacter thermautotrophicus

Query: 1 LWPKMAD 7
LW +MAD
Sbjct: 120 LWRRMAD 126




287|SequenceR|1440|1431|AKINFLWPKM

>sp|LYSK_SULAC|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 INFLWPKM 10
I LWPKM
Sbjct: 339 IEALWPKM 346


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 1 AKINFLWPKM 10
A ++ +WP+M
Sbjct: 194 AGVDIVWPEM 203


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 1 AKINFLWP 8
A +N+ WP
Sbjct: 418 ADVNYAWP 425


>sp|TATCO_HALVD|SEC-INDEPENDENT protein translocase protein TatCo|Haloferax volcanii (strain ATCC

Query: 3 INFLW 7
INFLW
Sbjct: 242 INFLW 246


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 3 INFLWPKM 10
I+FL+PK+
Sbjct: 639 ISFLYPKV 646


>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 NFLWPK 9
N++WP+
Sbjct: 81 NYIWPR 86


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 1 AKINFLW 7
AKI +LW
Sbjct: 403 AKIEYLW 409


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 1 AKINFLW 7
AKI +LW
Sbjct: 361 AKIEYLW 367




288|SequenceR|1445|1436|SSSARAKINF

***** No hits found ******


289|SequenceR|1450|1441|VLIVPSSSAR

>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VLIVPSSSA 9
VL+VP SSA
Sbjct: 148 VLVVPESSA 156




290|SequenceR|1455|1446|DLHTGVLIVP

>sp|Y2330_ARCFU|UNCHARACTERIZED protein AF_2330|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LHTGVLIVP 10
H+G +IVP
Sbjct: 100 FHSGCIIVP 108


>sp|KTHY_METAC|PROBABLE thymidylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLHTGVLIVP 10
DLH G ++P
Sbjct: 119 DLHRGWTVIP 128


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DLHTGVLIV 9
+LH GV++V
Sbjct: 388 ELHKGVMVV 396


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 DLHTGV 6
DLHTG+
Sbjct: 32 DLHTGI 37


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 DLHTGVL 7
DLH GVL
Sbjct: 204 DLHEGVL 210


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLHTGVLIVP 10
DL+ G+L +P
Sbjct: 399 DLYLGILSMP 408


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 LHTGVLIV 9
+H+G++IV
Sbjct: 6929 IHSGIIIV 6936


>sp|RTCA_KORCO|RNA 3'-terminal phosphate cyclase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DLHTGVLIVP 10
D H G +I+P
Sbjct: 283 DSHMGDMIIP 292


>sp|COBD_METTH|PROBABLE cobalamin biosynthesis protein CobD|Methanothermobacter

Query: 4 TGVLIVP 10
TGVL+VP
Sbjct: 202 TGVLMVP 208




291|SequenceR|1460|1451|KEDSVDLHTG

>sp|PYRE_THEAC|OROTATE phosphoribosyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 KEDSVDLH 8
KE+ +DLH
Sbjct: 151 KENGIDLH 158


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KEDSVDL 7
KED++DL
Sbjct: 181 KEDAIDL 187


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 5 VDLHTG 10
+DLHTG
Sbjct: 31 LDLHTG 36




292|SequenceR|1465|1456|CAKRQKEDSV

>sp|RL30E_METVS|LARGE ribosomal subunit protein eL30|Methanococcus vannielii (strain

Query: 1 CAKRQKED 8
CAK KED
Sbjct: 47 CAKDVKED 54


>sp|PRIS_METBF|DNA primase small subunit PriS|Methanosarcina barkeri (strain Fusaro /

Query: 1 CAKRQKED 8
C KR K+D
Sbjct: 236 CGKRYKKD 243




293|SequenceR|1470|1461|TIKSMCAKRQ

***** No hits found ******


294|SequenceR|1475|1466|NLLEKTIKSM

>sp|HPRT_METOI|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermococcus okinawensis (strain

Query: 1 NLLEKTIKS 9
NLLE T+KS
Sbjct: 2 NLLEDTLKS 10


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLEKTIKSM 10
LLE+ IKSM
Sbjct: 1120 LLEQEIKSM 1128


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 1 NLLEKTIKSM 10
+LLEKT+ SM
Sbjct: 285 DLLEKTLVSM 294


>sp|PUR2_PYRAB|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 LEKTIKSM 10
LE+TIK+M
Sbjct: 253 LEETIKAM 260


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 NLLEKTIKSM 10
+LLEKT+ SM
Sbjct: 285 DLLEKTLVSM 294


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NLLEKTIKSM 10
+LLEKT+ SM
Sbjct: 285 DLLEKTLVSM 294


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 1 NLLEKTIKSM 10
+LLEKT+ SM
Sbjct: 285 DLLEKTLVSM 294


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NLLEKTIKSM 10
+LLEKT+ SM
Sbjct: 285 DLLEKTLVSM 294


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LLEKTIKS 9
L+E+TIKS
Sbjct: 306 LIEETIKS 313


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NLLEKTIKS 9
N+LEKTI +
Sbjct: 92 NILEKTISA 100


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NLLEKTIKSM 10
N +EK IKS+
Sbjct: 10 NAIEKAIKSV 19


>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain

Query: 4 EKTIKSM 10
EKTIKSM
Sbjct: 4 EKTIKSM 10


>sp|RPIA_THEVO|RIBOSE-5-PHOSPHATE isomerase A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NLLEKTIKSM 10
N LEK IKS+
Sbjct: 189 NELEKKIKSI 198




295|SequenceR|1480|1471|PFGRKNLLEK

>sp|HIS6_METS5|IMIDAZOLE glycerol phosphate synthase subunit|Metallosphaera sedula (strain

Query: 3 GRKNLLEK 10
GRK LLEK
Sbjct: 58 GRKTLLEK 65


>sp|Y196_THEAC|PUTATIVE ankyrin repeat protein Ta0196|Thermoplasma acidophilum (strain ATCC

Query: 2 FGRKNLLE 9
FGRK +LE
Sbjct: 192 FGRKEILE 199


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GRKNLLEK 10
GRK+L+EK
Sbjct: 756 GRKDLIEK 763


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PFGRKNLLEK 10
PF RKN+ +K
Sbjct: 398 PFERKNIEKK 407


>sp|VORB_PYRFU|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PFGRKNLLEK 10
P GR++ LEK
Sbjct: 163 PGGRRHFLEK 172


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 1 PFGRKNLLE 9
PF R+ LLE
Sbjct: 303 PFPREELLE 311


>sp|PRNK_PYRHO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PH0197|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GRKNLLEK 10
G KNLLE+
Sbjct: 244 GEKNLLER 251


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 FGRKNLLEK 10
FG K LEK
Sbjct: 237 FGSKEFLEK 245




296|SequenceR|1485|1476|YDRIAPFGRK

>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum (strain

Query: 1 YDRIAPFGRK 10
YDR+ FGR+
Sbjct: 184 YDRVRDFGRQ 193


>sp|AATE_CENSY|A-TYPE ATP synthase subunit E|Cenarchaeum symbiosum (strain A)

Query: 1 YDRIAPFGRK 10
YDRI GRK
Sbjct: 48 YDRIVEEGRK 57


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YDRIAPFG 8
YDRI P G
Sbjct: 543 YDRIYPSG 550


>sp|Y224_METKA|UPF0284 protein MK0224|Methanopyrus kandleri (strain AV19 /

Query: 1 YDRIAPFGR 9
YDR+ FG+
Sbjct: 153 YDRLLEFGK 161


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YDRIAPFGRK 10
Y R+AP+ K
Sbjct: 117 YQRLAPYDTK 126


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 DRIAPFG 8
D +APFG
Sbjct: 380 DTLAPFG 386




297|SequenceR|1490|1481|ANVFHYDRIA

>sp|FEN_METJA|FLAP endonuclease 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NVFHYDRI 9
N F+YDR+
Sbjct: 294 NDFNYDRV 301


>sp|HIS6_METB6|IMIDAZOLE glycerol phosphate synthase subunit|Methanoregula boonei (strain

Query: 1 ANVFHYDRIA 10
A+VFHY ++
Sbjct: 242 ASVFHYGEMS 251


>sp|HIS6_IGNH4|IMIDAZOLE glycerol phosphate synthase subunit|Ignicoccus hospitalis (strain

Query: 1 ANVFHYDR 8
A+VFHY +
Sbjct: 226 ASVFHYGK 233


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 NVFHYDRIA 10
+V HY+RI+
Sbjct: 629 DVTHYERIS 637


>sp|Y410_METJA|UNCHARACTERIZED ATP-binding protein MJ0410|Methanocaldococcus jannaschii (strain

Query: 3 VFHYDRIA 10
++HYD +A
Sbjct: 70 IYHYDDLA 77


>sp|PSB1_METS5|PROTEASOME subunit beta 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 NVFHYDRIA 10
N++HY+ I+
Sbjct: 82 NIYHYNLIS 90


>sp|HIS6_METPE|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaerula palustris

Query: 1 ANVFHY 6
A+VFHY
Sbjct: 242 ASVFHY 247


>sp|HIS6_METMJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanoculleus marisnigri

Query: 1 ANVFHY 6
A+VFHY
Sbjct: 242 ASVFHY 247


>sp|HIS6_METLZ|IMIDAZOLE glycerol phosphate synthase subunit|Methanocorpusculum labreanum

Query: 1 ANVFHY 6
A+VFHY
Sbjct: 242 ASVFHY 247


>sp|HIS6_METHJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanospirillum hungatei JF-1

Query: 1 ANVFHY 6
A+VFHY
Sbjct: 242 ASVFHY 247


>sp|RPO1C_THEON|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus onnurineus (strain NA1)

Query: 2 NVFHYDRIA 10
N FHY +A
Sbjct: 82 NTFHYAGVA 90


>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain

Query: 2 NVFHYDRIA 10
N FHY +A
Sbjct: 82 NTFHYAGVA 90


>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain

Query: 2 NVFHYDRIA 10
N FHY +A
Sbjct: 82 NTFHYAGVA 90


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 2 NVFHYDRIA 10
N FHY +A
Sbjct: 82 NTFHYAGVA 90


>sp|RPO1C_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus horikoshii (strain ATCC

Query: 2 NVFHYDRIA 10
N FHY +A
Sbjct: 84 NTFHYAGVA 92


>sp|RPO1C_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus furiosus (strain ATCC

Query: 2 NVFHYDRIA 10
N FHY +A
Sbjct: 84 NTFHYAGVA 92


>sp|RPO1C_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus abyssi (strain GE5 /

Query: 2 NVFHYDRIA 10
N FHY +A
Sbjct: 84 NTFHYAGVA 92


>sp|RPO1C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 2 NVFHYDRIA 10
N FHY +A
Sbjct: 81 NTFHYAGVA 89


>sp|RPO1C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 2 NVFHYDRIA 10
N FHY +A
Sbjct: 81 NTFHYAGVA 89


>sp|RPO1C_HALMO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halococcus morrhuae (Micrococcus

Query: 2 NVFHYDRIA 10
N FHY +A
Sbjct: 79 NTFHYAGVA 87


>sp|RPO1C_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Haloarcula marismortui (strain ATCC

Query: 2 NVFHYDRIA 10
N FHY +A
Sbjct: 81 NTFHYAGVA 89


>sp|PSB2_SACI1|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 NVFHYDRI 9
N++HY+ I
Sbjct: 78 NIYHYNNI 85


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 FHYDRI 9
HYDRI
Sbjct: 170 LHYDRI 175


>sp|PSB2_SACS9|PROTEASOME subunit beta 2|Saccharolobus solfataricus (strain 98/2)

Query: 2 NVFHYDRI 9
N++HY+ I
Sbjct: 78 NIYHYNSI 85


>sp|PSB2_SACS2|PROTEASOME subunit beta 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NVFHYDRI 9
N++HY+ I
Sbjct: 75 NIYHYNSI 82


>sp|PSB1_SACI9|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain L.D.8.5 /

Query: 2 NVFHYDRI 9
N++HY+ I
Sbjct: 78 NIYHYNSI 85


>sp|PSB1_SACI7|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NVFHYDRI 9
N++HY+ I
Sbjct: 78 NIYHYNSI 85


>sp|PSB1_SACI6|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NVFHYDRI 9
N++HY+ I
Sbjct: 78 NIYHYNSI 85


>sp|PSB1_SACI4|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NVFHYDRI 9
N++HY+ I
Sbjct: 78 NIYHYNSI 85


>sp|PSB1_SACI3|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.16.27)

Query: 2 NVFHYDRI 9
N++HY+ I
Sbjct: 78 NIYHYNSI 85


>sp|PSB1_SACI2|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NVFHYDRI 9
N++HY+ I
Sbjct: 78 NIYHYNSI 85


>sp|Y1283_METJA|UNCHARACTERIZED protein MJ1283|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NVFHYDR 8
NVF YDR
Sbjct: 162 NVFVYDR 168


>sp|PSB2_SULTO|PROTEASOME subunit beta 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NVFHYDRI 9
N++HY+ I
Sbjct: 74 NIYHYNLI 81




298|SequenceR|1495|1486|DSEETANVFH

>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 1 DSEETANVFH 10
+SEE A +FH
Sbjct: 248 ESEEPAVLFH 257




299|SequenceR|1500|1491|LKALADSEET

***** No hits found ******


300|SequenceR|1505|1496|IITKRLKALA

***** No hits found ******


301|SequenceR|1510|1501|NLSENIITKR

>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 2 LSENIITKR 10
L ENIIT R
Sbjct: 74 LDENIITAR 82


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 2 LSENIITKR 10
L+ENI+T R
Sbjct: 68 LNENIVTAR 76


>sp|DNLI_PYRFU|DNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LSENIITKR 10
++EN+ITK+
Sbjct: 373 VAENLITKK 381


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NLSENII 7
NL+ENII
Sbjct: 189 NLAENII 195




302|SequenceR|1515|1506|DRIKFNLSEN

>sp|CRUF_HALJT|BISANHYDROBACTERIORUBERIN hydratase|Haloarcula japonica (strain ATCC 49778

Query: 1 DRIKFNLSE 9
DR F+LSE
Sbjct: 276 DRFDFDLSE 284


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 RIKFNLSE 9
RIK+NL E
Sbjct: 330 RIKYNLLE 337


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 1 DRIKFNLS 8
+RIKFN S
Sbjct: 231 ERIKFNTS 238


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 1 DRIKFNLSE 9
DR+ FNL +
Sbjct: 265 DRVSFNLKD 273


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 DRIKFNLSEN 10
DR+K N S++
Sbjct: 382 DRLKLNFSDD 391




303|SequenceR|1520|1511|GVVLQDRIKF

>sp|NADA2_METAC|QUINOLINATE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GVVLQDRI 8
GVV++DR+
Sbjct: 4 GVVMEDRL 11


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 GVVLQDRI 8
GVV+ DRI
Sbjct: 997 GVVISDRI 1004


>sp|DMO1_DESMO|HOMING endonuclease I-DmoI|Desulfurococcus mucosus (Desulfurococcus

Query: 2 VVLQDRIKF 10
+ L+DRIKF
Sbjct: 165 ISLRDRIKF 173


>sp|ENDA_NATPD|TRNA-SPLICING endonuclease|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GVVLQDRI 8
GV+L+DR+
Sbjct: 171 GVLLEDRV 178


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 3 VLQDRIKF 10
+L+DR+K+
Sbjct: 213 ILKDRVKY 220


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GVVLQDRIKF 10
G V +DR+KF
Sbjct: 781 GDVEKDRVKF 790




304|SequenceR|1525|1516|DPILQGVVLQ

>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PILQGVV 8
PILQG++
Sbjct: 282 PILQGII 288


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 ILQGVVLQ 10
IL+G+V+Q
Sbjct: 384 ILEGIVMQ 391


>sp|Y1411_THEKO|UPF0292 protein TK1411|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DPILQGV 7
DP+L+G+
Sbjct: 126 DPLLEGI 132




305|SequenceR|1530|1521|LEVYCDPILQ

>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 1 LEVYCDPIL 9
L+V CDP+L
Sbjct: 95 LKVICDPVL 103


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 5 CDPILQ 10
C+PILQ
Sbjct: 469 CEPILQ 474


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LEVYCD 6
+E+YCD
Sbjct: 407 IEIYCD 412


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 LEVYCDPILQ 10
++ YC PI Q
Sbjct: 509 VDSYCSPIKQ 518


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 LEVYCDPILQ 10
++ YC PI Q
Sbjct: 509 VDSYCSPIKQ 518


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 3 VYCDPI 8
VYC PI
Sbjct: 143 VYCTPI 148


>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 3 VYCDPI 8
VYC PI
Sbjct: 143 VYCTPI 148


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VYCDPI 8
VYC PI
Sbjct: 143 VYCTPI 148


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EVYCDPILQ 10
E+ CD +LQ
Sbjct: 409 ELECDEVLQ 417




306|SequenceR|1535|1526|LIIKELEVYC

>sp|RL10_PICTO|LARGE ribosomal subunit protein uL10|Picrophilus torridus (strain ATCC

Query: 1 LIIKELEVY 9
L++K+LE+Y
Sbjct: 170 LVLKDLEIY 178


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IKELEVYC 10
+KEL+ +C
Sbjct: 172 VKELDAFC 179


>sp|Y555_METJA|PUTATIVE aminopeptidase MJ0555|Methanocaldococcus jannaschii (strain ATCC

Query: 4 KELEVYC 10
KELE YC
Sbjct: 29 KELEKYC 35


>sp|Y731_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus (strain

Query: 2 IIKELEVY 9
+IKELE Y
Sbjct: 279 VIKELEKY 286


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 1 LIIKELEV 8
LI+KE+E+
Sbjct: 249 LIVKEVEI 256


>sp|BIOW_METVS|6-CARBOXYHEXANOATE--COA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LIIKELEVY 9
++ KELEVY
Sbjct: 86 ILRKELEVY 94




307|SequenceR|1540|1531|NKRESLIIKE

***** No hits found ******


308|SequenceR|1545|1536|FEIPVNKRES

>sp|IF6_METBF|TRANSLATION initiation factor 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 FEIPVN 6
FE+PVN
Sbjct: 170 FELPVN 175




309|SequenceR|1550|1541|RDIVPFEIPV

>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 DIVPFEIPV 10
D+ P EIPV
Sbjct: 343 DVCPMEIPV 351


>sp|KHSE_META3|HOMOSERINE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RDIVPFEIPV 10
R++VP EIP+
Sbjct: 194 RELVPKEIPI 203


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 RDIVPFEIPV 10
R+I+P EIP+
Sbjct: 184 REILPKEIPI 193


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 RDIVPFEIPV 10
R+I+P EIP+
Sbjct: 184 REILPKEIPI 193


>sp|KHSE_METM5|HOMOSERINE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 RDIVPFEIPV 10
R+I+P EIP+
Sbjct: 184 REILPKEIPI 193


>sp|SPSS_METVS|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DIVPFEIPV 10
DI+ FE PV
Sbjct: 310 DIIRFETPV 318


>sp|KHSE_METMP|HOMOSERINE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RDIVPFEIPV 10
R+I+P EIP+
Sbjct: 184 REILPKEIPI 193


>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DIVPFEIPV 10
D+V FE PV
Sbjct: 307 DLVRFETPV 315


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 DIVPFEIPV 10
D+ P EIP+
Sbjct: 337 DVCPVEIPL 345


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RDIVPFEI 8
R+IVPF I
Sbjct: 508 REIVPFNI 515


>sp|SPSS_METMP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DIVPFEIPV 10
DI+ FE P+
Sbjct: 310 DIIRFETPI 318


>sp|AGOG_PYRAE|N-GLYCOSYLASE/DNA lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 IVPFEIPV 10
++PF+IP+
Sbjct: 162 VLPFDIPI 169


>sp|SPSS_METM6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C6 /

Query: 2 DIVPFEIPV 10
DI+ FE P+
Sbjct: 310 DIIRFETPI 318


>sp|SPSS_METM7|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C7 /

Query: 2 DIVPFEIPV 10
DI+ FE P+
Sbjct: 310 DIIRFETPI 318


>sp|SPSS_METM5|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C5 /

Query: 2 DIVPFEIPV 10
DI+ FE P+
Sbjct: 310 DIIRFETPI 318


>sp|SPSS_METJA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DIVPFEIPV 10
D++ FE PV
Sbjct: 307 DLIKFETPV 315


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 RDIVPF 6
RD++PF
Sbjct: 372 RDVIPF 377


>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RDIVPFEIP 9
+DI+P++ P
Sbjct: 280 KDIIPYKNP 288


>sp|SPSS_META3|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DIVPFEIPV 10
D++ FE P+
Sbjct: 313 DLIKFETPI 321


>sp|RRP4_PICTO|EXOSOME complex component Rrp4|Picrophilus torridus (strain ATCC 700027

Query: 2 DIVPFEIP 9
DIVPF P
Sbjct: 47 DIVPFNGP 54


>sp|Y531_METTH|UNCHARACTERIZED protein MTH_531|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RDIVPFEIP 9
RD+ FE+P
Sbjct: 170 RDLAVFELP 178


>sp|GCSH1_SACS2|PROBABLE glycine cleavage system H|Saccharolobus solfataricus (strain ATCC

Query: 1 RDIVPFEIP 9
RDIV E+P
Sbjct: 45 RDIVGIELP 53


>sp|Y953_METJA|UNCHARACTERIZED protein MJ0953|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DIVPFE 7
DIVPFE
Sbjct: 87 DIVPFE 92


>sp|PCP_THEKO|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DIVPFEIPV 10
DI+ F++PV
Sbjct: 34 DIIKFQLPV 42


>sp|AGOG_METKA|N-GLYCOSYLASE/DNA lyase|Methanopyrus kandleri (strain AV19 /

Query: 5 PFEIPV 10
PFEIP+
Sbjct: 167 PFEIPI 172


>sp|KHSE_METVS|HOMOSERINE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 RDIVPFEIPV 10
R+I+P E+P+
Sbjct: 185 REILPKEVPM 194


>sp|SYN_THEAC|ASPARAGINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RDIVPFEIPV 10
+D+ PF +PV
Sbjct: 322 KDLKPFYMPV 331


>sp|KAE1_PYRNV|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum neutrophilum

Query: 3 IVPFEIPV 10
+VPF +P+
Sbjct: 187 VVPFPMPI 194


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IVPFEIP 9
I+P+E+P
Sbjct: 367 ILPYEVP 373


>sp|TOP6A_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 2 DIVPFEIP 9
DIV +E+P
Sbjct: 293 DIVEYELP 300




310|SequenceR|1555|1546|QLLRKRDIVP

>sp|Y2160_PYRAE|UPF0173 metal-dependent hydrolase PAE2160|Pyrobaculum aerophilum (strain

Query: 1 QLLRKRDIVP 10
QLLR R +VP
Sbjct: 177 QLLRARRVVP 186


>sp|Y1074_PYRCJ|UPF0173 metal-dependent hydrolase Pcal_1074|Pyrobaculum calidifontis

Query: 1 QLLRKRDIVP 10
QLLR R +VP
Sbjct: 177 QLLRPRRVVP 186


>sp|Y810_PYRAR|UPF0173 metal-dependent hydrolase Pars_0810|Pyrobaculum arsenaticum (strain

Query: 1 QLLRKRDIVP 10
QLLR R +VP
Sbjct: 177 QLLRPRRVVP 186


>sp|RADB_METBU|DNA repair and recombination protein|Methanococcoides burtonii (strain

Query: 2 LLRKRDIV 9
L RKRDIV
Sbjct: 150 LARKRDIV 157


>sp|Y803_PYRIL|UPF0173 metal-dependent hydrolase Pisl_0803|Pyrobaculum islandicum (strain

Query: 1 QLLRKRDIVP 10
QLLR + +VP
Sbjct: 177 QLLRPKKVVP 186


>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 2 LLRKRDIVP 10
LLR R IVP
Sbjct: 293 LLRDRAIVP 301


>sp|RS2_SACS2|SMALL ribosomal subunit protein uS2|Saccharolobus solfataricus (strain

Query: 1 QLLRKRDIVP 10
Q+LR+R ++P
Sbjct: 204 QILRERRVIP 213


>sp|Y1562_ARCFU|UNCHARACTERIZED protein AF_1562|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLRKRDIV 9
LL+K+DI+
Sbjct: 109 LLKKKDII 116


>sp|TRUA_PYRNV|TRNA pseudouridine synthase A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LLRKRDI 8
+LRKRDI
Sbjct: 178 VLRKRDI 184


>sp|KCY_METVS|CYTIDYLATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LLRKRDIVP 10
+L+K D+VP
Sbjct: 86 ILKKNDMVP 94


>sp|RFCS_METB6|REPLICATION factor C small subunit|Methanoregula boonei (strain DSM 21154

Query: 1 QLLRKRDIVP 10
+LLR+R I P
Sbjct: 253 RLLRERGIAP 262


>sp|RL21_METPE|LARGE ribosomal subunit protein eL21|Methanosphaerula palustris (strain

Query: 3 LRKRDIVP 10
LRKR IVP
Sbjct: 19 LRKRGIVP 26


>sp|RS2_METS3|SMALL ribosomal subunit protein uS2|Methanobrevibacter smithii (strain

Query: 1 QLLRKRDIVP 10
Q+LR+R +P
Sbjct: 173 QILRERGTIP 182


>sp|RS2_STAMF|SMALL ribosomal subunit protein uS2|Staphylothermus marinus (strain ATCC

Query: 1 QLLRKRDIVP 10
Q+LR+R ++P
Sbjct: 193 QILRERGLLP 202


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 1 QLLRKRDI 8
+ LRKRDI
Sbjct: 379 EALRKRDI 386


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 LRKRDIVP 10
LR+R IVP
Sbjct: 361 LRRRGIVP 368




311|SequenceR|1560|1551|NERVLQLLRK

>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 ERVLQLLRK 10
ERVL L+RK
Sbjct: 619 ERVLDLIRK 627


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 2 ERVLQLLRK 10
ER+L L+RK
Sbjct: 619 ERILDLVRK 627


>sp|PSA_ARCFU|PROTEASOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NERVLQLLRK 10
NER+ +LL+K
Sbjct: 237 NERIRELLKK 246


>sp|CBID_SULTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ERVLQLLRK 10
+RVLQ LRK
Sbjct: 316 KRVLQRLRK 324


>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NERVLQLLR 9
NE+VL LLR
Sbjct: 333 NEKVLTLLR 341


>sp|Y796_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 ERVLQLLRK 10
E+++QLL+K
Sbjct: 182 EKIMQLLKK 190


>sp|RNH2_PYRAE|RIBONUCLEASE HII|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ERVLQLLRK 10
+R++QLL+K
Sbjct: 146 DRLIQLLKK 154


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 NERVLQLLRK 10
++R++QL+RK
Sbjct: 430 SDRMMQLMRK 439


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ERVLQLLRK 10
+ VLQL+RK
Sbjct: 48 QNVLQLIRK 56




312|SequenceR|1565|1556|DLQLQNERVL

>sp|PGK_SULAC|PHOSPHOGLYCERATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DLQLQNERVL 10
DL+LQN++VL
Sbjct: 14 DLELQNKKVL 23


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DLQLQNERVL 10
D+QL NE ++
Sbjct: 104 DIQLDNEAII 113




313|SequenceR|1570|1561|PLENEDLQLQ

>sp|DCDB_HALSA|DCTP deaminase, dUMP-forming|Halobacterium salinarum (strain ATCC

Query: 1 PLENEDLQLQ 10
PLE+ DLQ+Q
Sbjct: 21 PLEDVDLQVQ 30


>sp|DCDB_HALS3|DCTP deaminase, dUMP-forming|Halobacterium salinarum (strain ATCC

Query: 1 PLENEDLQLQ 10
PLE+ DLQ+Q
Sbjct: 21 PLEDVDLQVQ 30


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 PLENEDLQLQ 10
PLENED L+
Sbjct: 785 PLENEDQVLE 794


>sp|Y1914_METTH|UPF0425 pyridoxal phosphate-dependent protein

Query: 1 PLENEDLQL 9
PLE EDL L
Sbjct: 42 PLEEEDLDL 50


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PLENEDL 7
PL+NEDL
Sbjct: 798 PLDNEDL 804


>sp|RS3_METJA|SMALL ribosomal subunit protein uS3|Methanocaldococcus jannaschii

Query: 1 PLENEDLQLQ 10
P+EN DL Q
Sbjct: 83 PVENPDLDAQ 92


>sp|DAPF_METTH|DIAMINOPIMELATE epimerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PLENEDLQL 9
P+E ED++L
Sbjct: 150 PVEGEDIKL 158


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 2 LENEDLQLQ 10
LENED+++
Sbjct: 385 LENEDVEVH 393


>sp|Y3512_METJA|UNCHARACTERIZED protein MJECL12|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LENEDLQL 9
LENED++L
Sbjct: 48 LENEDVKL 55


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PLENEDLQLQ 10
PLE ED LQ
Sbjct: 878 PLEREDQILQ 887


>sp|DCD_HALMA|DCTP deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PLENEDLQLQ 10
PL++ D+Q+Q
Sbjct: 21 PLDDPDIQIQ 30


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 PLENEDLQLQ 10
PLENE+ L+
Sbjct: 785 PLENENQVLE 794


>sp|PROF3_LOKSG|LOKI profilin-3|Lokiarchaeum sp. (strain GC14_75)

Query: 2 LENEDLQL 9
L+N+DLQL
Sbjct: 69 LKNDDLQL 76


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PLENEDLQLQ 10
PLENE+ L+
Sbjct: 785 PLENENQVLE 794


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LENEDLQLQ 10
LEN ++Q+Q
Sbjct: 770 LENSNIQIQ 778




314|SequenceR|1575|1566|FHVAHPLENE

>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FHVAHPLENE 10
HV HP+ E
Sbjct: 399 LHVLHPISEE 408


>sp|KDPA_METB6|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Methanoregula boonei (strain DSM

Query: 4 AHPLEN 9
AHP EN
Sbjct: 253 AHPFEN 258


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 FHVAHPLENE 10
+H+ PLE+E
Sbjct: 349 WHLPRPLEDE 358


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HVAHPLENE 10
+V PLENE
Sbjct: 434 YVPRPLENE 442


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 1 FHVAHPLENE 10
F + HPL+ E
Sbjct: 112 FDITHPLDIE 121


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 FHVAHPLENE 10
+H+ PLE+E
Sbjct: 349 WHLPRPLEDE 358


>sp|DFX_ARCFU|DESULFOFERRODOXIN homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VAHPLENE 10
VAHP+E +
Sbjct: 67 VAHPMEEQ 74


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 VAHPLEN 9
V HPL+N
Sbjct: 358 VIHPLDN 364


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 FHVAHPLENE 10
FH HPLE+E
Sbjct: 104 FH--HPLEDE 111


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 HPLENE 10
HPLE+E
Sbjct: 107 HPLEDE 112


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 HPLENE 10
HPLE+E
Sbjct: 107 HPLEDE 112


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 HPLENE 10
HPLE+E
Sbjct: 107 HPLEDE 112


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 HPLENE 10
HPLE+E
Sbjct: 107 HPLEDE 112


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 HPLENE 10
HPLE+E
Sbjct: 107 HPLEDE 112


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 HPLENE 10
HPLE+E
Sbjct: 107 HPLEDE 112




315|SequenceR|1580|1571|GSENLFHVAH

>sp|PGP_PYRAB|PHOSPHOGLYCOLATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 GSENLFHV 8
G+E +FHV
Sbjct: 217 GAEAIFHV 224


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 ENLFHVA 9
EN+FHV
Sbjct: 40 ENVFHVG 46


>sp|YB50_METTW|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 GSENLFHVAH 10
G EN+ AH
Sbjct: 153 GDENVMQTAH 162


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GSENLFHVAH 10
+ENL H+A+
Sbjct: 406 AAENLHHLAY 415


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SENLFHVAH 10
+ENL HV++
Sbjct: 80 AENLIHVSN 88


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GSENLFHVAH 10
GS+ FH+A+
Sbjct: 29 GSDPYFHLAY 38


>sp|QUEC_METB6|7-CYANO-7-DEAZAGUANINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 GSENLFHVAH 10
G+ +LF+ AH
Sbjct: 113 GAGHLFYAAH 122




316|SequenceR|1585|1576|FHLLVGSENL

>sp|RL1_METTL|LARGE ribosomal subunit protein uL1|Methanothermococcus

Query: 1 FHLLVGSENL 10
FH+LVG+E +
Sbjct: 160 FHVLVGNEKM 169


>sp|RL1_ARCFU|LARGE ribosomal subunit protein uL1|Archaeoglobus fulgidus (strain ATCC

Query: 1 FHLLVGSENL 10
FH +GSEN+
Sbjct: 163 FHAPIGSENM 172


>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FHLLVGSE 8
HLLVGSE
Sbjct: 186 LHLLVGSE 193


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 FHLLVGSEN 9
FH+ G+EN
Sbjct: 406 FHMTSGTEN 414


>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HLLVGSEN 9
H+++GS N
Sbjct: 190 HMMIGSNN 197


>sp|RL1_NATPD|LARGE ribosomal subunit protein uL1|Natronomonas pharaonis (strain ATCC

Query: 1 FHLLVGSENL 10
FH VG+E++
Sbjct: 159 FHTRVGAEDM 168


>sp|RL1_HALSA|LARGE ribosomal subunit protein uL1|Halobacterium salinarum (strain ATCC

Query: 1 FHLLVGSENL 10
FH VG+E++
Sbjct: 160 FHTRVGAEDM 169


>sp|RL1_HALS3|LARGE ribosomal subunit protein uL1|Halobacterium salinarum (strain ATCC

Query: 1 FHLLVGSENL 10
FH VG+E++
Sbjct: 160 FHTRVGAEDM 169


>sp|RL1_HALMA|LARGE ribosomal subunit protein uL1|Haloarcula marismortui (strain ATCC

Query: 1 FHLLVGSENL 10
FH VG+E++
Sbjct: 160 FHTRVGAEDM 169


>sp|RL1_HALLT|LARGE ribosomal subunit protein uL1|Halorubrum lacusprofundi (strain ATCC

Query: 1 FHLLVGSENL 10
FH VG+E++
Sbjct: 159 FHTRVGAEDM 168


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 1 FHLLVGSEN 9
FH+L SEN
Sbjct: 139 FHVLAISEN 147


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HLLVGSENL 10
HLL+ +NL
Sbjct: 145 HLLIAKDNL 153


>sp|GLCDH_METAR|GLUCOSE 1-dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 2 HLLVGSENL 10
+L++G ENL
Sbjct: 59 YLIIGHENL 67


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 3 LLVGSENL 10
+L+G+ENL
Sbjct: 628 ILIGNENL 635


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FHLLVGSE 8
+H++ GSE
Sbjct: 373 YHIITGSE 380


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 HLLVGSENL 10
H L GS+N+
Sbjct: 47 HALTGSQNV 55


>sp|ADHS_HALSA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FHLLVGSEN 9
FH+ VGS++
Sbjct: 109 FHINVGSDH 117




317|SequenceR|1590|1581|LAPDQFHLLV

>sp|MSRB_METMA|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina mazei (strain

Query: 1 LAPDQFHLL 9
L P+Q+H+L
Sbjct: 17 LTPEQYHVL 25


>sp|MSRB_METBF|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina barkeri

Query: 1 LAPDQFHLL 9
L P+Q+H+L
Sbjct: 17 LTPEQYHVL 25


>sp|MALK_THELN|TREHALOSE/MALTOSE import ATP-binding protein MalK|Thermococcus litoralis (strain ATCC

Query: 1 LAPDQFHLL 9
L PDQF +L
Sbjct: 267 LLPDQFEVL 275


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PDQFHLLV 10
PD FH +V
Sbjct: 466 PDNFHAIV 473


>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LAPDQFHLLV 10
PD+ HL+V
Sbjct: 144 FGPDKLHLIV 153


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 LAPDQFHLL 9
L D+FHLL
Sbjct: 254 LRDDEFHLL 262


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LAPDQFHLLV 10
PD+ HL++
Sbjct: 144 FTPDKLHLII 153


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 3 PDQFHLLV 10
PD +HL V
Sbjct: 728 PDDWHLFV 735


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 3 PDQFHLLV 10
PD +HL V
Sbjct: 730 PDDWHLFV 737


>sp|Y1488_METJA|UNCHARACTERIZED protein MJ1488|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAPDQFHLLV 10
LAP+ +HL++
Sbjct: 291 LAPEGWHLVM 300




318|SequenceR|1595|1586|LDSLQLAPDQ

>sp|FAEHP_METJA|BIFUNCTIONAL enzyme Fae/Hps|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DSLQLAPD 9
DSL+L PD
Sbjct: 282 DSLKLKPD 289


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LDSLQLAPDQ 10
LD+ +L PDQ
Sbjct: 304 LDATELPPDQ 313




319|SequenceR|1600|1591|PEVFYLDSLQ

>sp|RBL_METAC|RIBULOSE bisphosphate carboxylase|Methanosarcina acetivorans (strain ATCC

Query: 1 PEVFYLDS 8
P VFYLD+
Sbjct: 63 PHVFYLDA 70


>sp|RNH2_PYRAB|RIBONUCLEASE HII|Pyrococcus abyssi (strain GE5 /

Query: 1 PEVFYLDS 8
PEV Y+DS
Sbjct: 99 PEVIYIDS 106


>sp|RBL_METBF|RIBULOSE bisphosphate carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PEVFYLD 7
P VFY+D
Sbjct: 63 PHVFYMD 69


>sp|NADE_METBU|NH(3)-DEPENDENT NAD(+) synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PEVFYLDSLQ 10
P++ YLD L+
Sbjct: 249 PQIAYLDDLR 258


>sp|RNH2_ARCFU|RIBONUCLEASE HII|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEVFYLDS 8
PE+ Y+DS
Sbjct: 95 PEIAYVDS 102


>sp|PSB_METTP|PROTEASOME subunit beta|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PEVFYLDSL 9
P++F LD+L
Sbjct: 116 PKIFSLDAL 124


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 4 FYLDSL 9
FYLDSL
Sbjct: 203 FYLDSL 208


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 FYLDSLQ 10
FYL+SLQ
Sbjct: 87 FYLNSLQ 93




320|SequenceR|1605|1596|KCLWKPEVFY

>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 1 KCLWK 5
KCLWK
Sbjct: 295 KCLWK 299


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 1 KCLWK 5
KCLWK
Sbjct: 295 KCLWK 299


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CLWKP 6
CLWKP
Sbjct: 208 CLWKP 212


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 KPEVFY 10
KPEV+Y
Sbjct: 477 KPEVYY 482


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 KPEVFY 10
KPEV+Y
Sbjct: 479 KPEVYY 484


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 KPEVFY 10
KPEV+Y
Sbjct: 479 KPEVYY 484


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 5 KPEVFY 10
KPEV+Y
Sbjct: 479 KPEVYY 484


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 5 KPEVFY 10
KPEV+Y
Sbjct: 479 KPEVYY 484


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 5 KPEVFY 10
KPEV+Y
Sbjct: 479 KPEVYY 484


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 KPEVFY 10
KPEV+Y
Sbjct: 479 KPEVYY 484


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 KPEVFY 10
KPEV+Y
Sbjct: 479 KPEVYY 484


>sp|GALE_METJA|PUTATIVE UDP-glucose 4-epimerase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 WKPEV 8
WKPE+
Sbjct: 282 WKPEI 286


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LWKPEVF 9
LW+PE +
Sbjct: 437 LWEPEFY 443


>sp|COFD_METPE|2-PHOSPHO-L-LACTATE transferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KCLWKPEVF 9
+C+W P++
Sbjct: 203 ECIWVPDLL 211


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 KCLWKPEV 8
K WKP+V
Sbjct: 519 KAKWKPKV 526


>sp|GAL1_THEKO|GALACTOKINASE kodakarensis (strain ATCC BAA-918

Query: 4 WKPEVF 9
W PEVF
Sbjct: 334 WTPEVF 339


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 WKPEVF 9
WKP+VF
Sbjct: 191 WKPKVF 196


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 LWKPEVFY 10
+WK + FY
Sbjct: 413 MWKEKFFY 420


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro

Query: 2 CLWKPEVFY 10
C+ KP FY
Sbjct: 47 CVGKPPKFY 55


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain

Query: 2 CLWKPEVFY 10
C+ KP FY
Sbjct: 47 CVGKPPKFY 55


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 2 CLWKPEVFY 10
C+ KP FY
Sbjct: 47 CVGKPPKFY 55


>sp|PURP1_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 1|Methanosarcina mazei (strain ATCC

Query: 2 CLWKPEVFY 10
C+ KP FY
Sbjct: 47 CVGKPPKFY 55


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LWKPEVFY 10
LWK E++Y
Sbjct: 19 LWKDEMYY 26


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 1 KCLWKPEVF 9
KC W +VF
Sbjct: 160 KCPWCKDVF 168


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KCLWKPEVF 9
K WKP V
Sbjct: 208 KTFWKPNVL 216


>sp|GUAAA_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit A|Archaeoglobus fulgidus

Query: 4 WKPEVFY 10
W PEV++
Sbjct: 160 WHPEVYH 166


>sp|HMC1B_METSH|CHROMOSOMAL protein MC1b|Methanothrix soehngenii (Methanosaeta concilii)

Query: 3 LWKPEV 8
+WKP+V
Sbjct: 73 IWKPKV 78


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 LWKPEVFY 10
L KPE++Y
Sbjct: 1226 LGKPEMYY 1233


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LWKPEVFY 10
L KPE++Y
Sbjct: 1204 LGKPEMYY 1211


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LWKPEVFY 10
L KPE++Y
Sbjct: 1039 LGKPEMYY 1046


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 WKPEVFY 10
W P V+Y
Sbjct: 21 WDPSVYY 27


>sp|Y1214_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 4 WKPEVFY 10
WKP V Y
Sbjct: 297 WKPNVDY 303


>sp|HMC1A_METSH|CHROMOSOMAL protein MC1a|Methanothrix soehngenii (Methanosaeta concilii)

Query: 3 LWKPEV 8
+WKP+V
Sbjct: 73 IWKPKV 78




321|SequenceR|1610|1601|IQAMIKCLWK

>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 6 KCLWK 10
KCLWK
Sbjct: 295 KCLWK 299


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 6 KCLWK 10
KCLWK
Sbjct: 295 KCLWK 299


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 2 QAMIKC 7
QAM+KC
Sbjct: 281 QAMLKC 286




322|SequenceR|1615|1606|VKVTLIQAMI

>sp|Y949_METPE|UPF0179 protein Mpal_0949|Methanosphaerula palustris (strain ATCC

Query: 2 KVTLIQAMI 10
KVTLI AM+
Sbjct: 7 KVTLIGAML 15




323|SequenceR|1620|1611|KPCGEVKVTL

>sp|COFC_ARCFU|2-PHOSPHO-L-LACTATE guanylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KPCGEVKV 8
KP GE+KV
Sbjct: 41 KPFGEIKV 48


>sp|PNPH_PYRFU|6-OXOPURINE nucleoside phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PCGEVKVTL 10
P GEVK+T+
Sbjct: 28 PYGEVKITV 36


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KPCGEVKVT 9
KP EVKVT
Sbjct: 211 KPLDEVKVT 219


>sp|APGM_METPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 1 KPCGEV 6
+PCGE+
Sbjct: 17 RPCGEL 22


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19 /

Query: 3 CGEVKVTL 10
CG V++TL
Sbjct: 139 CGSVRITL 146


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KPCGEVKV 8
K CGEV V
Sbjct: 409 KKCGEVMV 416


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 KPCGEVKVTL 10
+PC VKV+L
Sbjct: 1100 EPCRGVKVSL 1109


>sp|CHEB_NATPD|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Natronomonas pharaonis

Query: 1 KPCGEVKV 8
KP GEV V
Sbjct: 108 KPSGEVSV 115


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CGEVKV 8
CGE+KV
Sbjct: 466 CGEMKV 471


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 KPCGEVKV 8
K CGE+KV
Sbjct: 542 KRCGELKV 549


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 KPCGEVKVT 9
+ CG +K+T
Sbjct: 101 RSCGRIKLT 109


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KPCGEVKV 8
K CGEV +
Sbjct: 409 KKCGEVMI 416


>sp|Y1807_METBF|PROTEIN Mbar_A1807|Methanosarcina barkeri (strain Fusaro /

Query: 1 KPCGEV 6
+PCGEV
Sbjct: 189 EPCGEV 194


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KPCGEVKV 8
K CGEV V
Sbjct: 410 KRCGEVMV 417


>sp|Y1614_METAC|MACRO domain-containing protein MA_1614|Methanosarcina acetivorans

Query: 2 PCGEVKVT 9
P GE K+T
Sbjct: 81 PTGEAKIT 88


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KPCGEVKV 8
K CGEV +
Sbjct: 409 KKCGEVMI 416




324|SequenceR|1625|1616|IGKPHKPCGE

>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 1 IGKPHKPCG 9
+G PHKP G
Sbjct: 496 MGTPHKPLG 504


>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 4 PHKPCGE 10
PH+PC E
Sbjct: 94 PHEPCSE 100


>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGKPHKPCGE 10
+G+PH P E
Sbjct: 123 VGRPHYPVSE 132


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 IGKPHK 6
IGKPH+
Sbjct: 37 IGKPHR 42


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IGKPHK 6
IGKPH+
Sbjct: 37 IGKPHR 42


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 IGKPHK 6
IGKPH+
Sbjct: 37 IGKPHR 42


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 1 IGKPHK 6
IGKPH+
Sbjct: 37 IGKPHR 42


>sp|TRPF_AERPE|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 3 KPHKPCG 9
KP +PCG
Sbjct: 114 KPQEPCG 120


>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 1 IGKPHKP 7
IGKP KP
Sbjct: 218 IGKPIKP 224


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 IGKPHKP 7
IGKP KP
Sbjct: 218 IGKPIKP 224


>sp|GATD_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus horikoshii (strain ATCC

Query: 2 GKPHKP 7
GKPH P
Sbjct: 87 GKPHLP 92


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 2 GKPHKP 7
GKP KP
Sbjct: 35 GKPQKP 40


>sp|MDH_SULTO|MALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GKPHKP 7
GKP KP
Sbjct: 79 GKPRKP 84


>sp|MDH_SULAC|MALATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GKPHKP 7
GKP KP
Sbjct: 79 GKPRKP 84


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro

Query: 2 GKPHKPCGE 10
GK HK GE
Sbjct: 66 GKEHKTAGE 74


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 2 GKPHKPCG 9
G PH CG
Sbjct: 271 GYPHTSCG 278


>sp|MDH_SACS2|MALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GKPHKP 7
GKP KP
Sbjct: 79 GKPRKP 84


>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IGKPHKP 7
+ KPH P
Sbjct: 234 VAKPHNP 240


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 IGKPH 5
IGKPH
Sbjct: 122 IGKPH 126


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IGKPHKPCGE 10
+ P+KP G+
Sbjct: 6 LNSPYKPLGD 15




325|SequenceR|1630|1621|DRRSIIGKPH

>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 2 RRSIIGKPH 10
RR+II PH
Sbjct: 193 RRAIISDPH 201


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii (strain

Query: 1 DRRSIIGK 8
DRR++IGK
Sbjct: 348 DRRAMIGK 355


>sp|ARLY_METAR|ARGININOSUCCINATE lyase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DRRSIIGKP 9
+RRSI+G P
Sbjct: 440 ERRSIVGGP 448


>sp|NTPPA_METBU|DTTP/UTP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 4 SIIGKPH 10
+I+GKPH
Sbjct: 78 AILGKPH 84


>sp|MTRA_METST|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosphaera stadtmanae (strain

Query: 1 DRRSIIGKP 9
+++SIIG P
Sbjct: 101 EKKSIIGSP 109


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 RRSIIGKP 9
RR+ IGKP
Sbjct: 651 RRAYIGKP 658


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC

Query: 1 DRRSIIGKP 9
D RS++G+P
Sbjct: 29 DLRSVLGEP 37


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 2 RRSIIGKPH 10
RR++I KP+
Sbjct: 658 RRALIAKPY 666


>sp|RL23_METS3|LARGE ribosomal subunit protein uL23|Methanobrevibacter smithii (strain

Query: 1 DRRSIIGKPH 10
D SII KPH
Sbjct: 2 DSYSIIIKPH 11


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 2 RRSIIGKPH 10
RR++I PH
Sbjct: 197 RRTMIANPH 205


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 1 DRRSIIGK 8
DR+ +IGK
Sbjct: 146 DRKEVIGK 153


>sp|GGR2_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DRRSIIGKP 9
DR+S IG P
Sbjct: 33 DRKSEIGSP 41


>sp|PSTOM_PYRHO|STOMATIN homolog PH1511|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RSIIGKPH 10
RS+IG+ H
Sbjct: 121 RSVIGQAH 128


>sp|PSTOM_PYRAB|STOMATIN homolog PYRAB06580|Pyrococcus abyssi (strain GE5 /

Query: 3 RSIIGKPH 10
RS+IG+ H
Sbjct: 121 RSVIGQAH 128


>sp|GGR_METS3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DRRSIIGKP 9
D+RS IG P
Sbjct: 33 DKRSEIGAP 41


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 RRSIIGKPH 10
RR+ +G+P+
Sbjct: 650 RRAFLGRPY 658




326|SequenceR|1635|1626|LFKEVDRRSI

>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 FKEVDRRS 9
+KE DRR+
Sbjct: 285 YKEADRRA 292


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 FKEVDRRS 9
+KE DRR+
Sbjct: 285 YKEADRRA 292


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 FKEVDRRS 9
+KE DRR+
Sbjct: 286 YKEADRRA 293


>sp|Y759_PYRIL|UPF0210 protein Pisl_0759|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LFKEVDRRSI 10
LF+E+D R++
Sbjct: 16 LFRELDIRAV 25


>sp|Y3581_PYRAE|UPF0210 protein PAE3581|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LFKEVDRRSI 10
LF+E+D R++
Sbjct: 16 LFRELDIRAV 25


>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LFKEVDRRSI 10
LF+E+D R++
Sbjct: 16 LFRELDIRAV 25


>sp|KCY_PYRFU|CYTIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KEVDRRSI 10
+EVDRR I
Sbjct: 66 REVDRRQI 73


>sp|KCY_THESM|CYTIDYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 KEVDRRSI 10
+EVDRR I
Sbjct: 66 REVDRRQI 73


>sp|RNZ_PYRAB|RIBONUCLEASE Z|Pyrococcus abyssi (strain GE5 /

Query: 1 LFKEVDRR 8
+FKE DRR
Sbjct: 146 VFKEKDRR 153


>sp|AROB_THEVO|3-DEHYDROQUINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LFKEVDRRSI 10
L ++VDRRS+
Sbjct: 88 LERKVDRRSL 97


>sp|RNZ_PYRFU|RIBONUCLEASE Z|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LFKEVDRRS 9
+FKE DRR
Sbjct: 146 VFKEKDRRG 154


>sp|KCY_PYRHO|CYTIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KEVDRRSI 10
+EVDRR I
Sbjct: 66 REVDRRQI 73


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LFKEVDRRS 9
+FKE DRR
Sbjct: 145 VFKEKDRRG 153


>sp|RS9_DESA1|SMALL ribosomal subunit protein uS9|Desulfurococcus amylolyticus (strain

Query: 1 LFKEVDR 7
LFKE DR
Sbjct: 105 LFKEYDR 111




327|SequenceR|1640|1631|KRKKSLFKEV

>sp|Y671_SACI1|UPF0282 protein YN1551_0671|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 RKKSLFKE 9
R+K LFKE
Sbjct: 281 RRKELFKE 288


>sp|Y2281_SACI2|UPF0282 protein LS215_2281|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 RKKSLFKE 9
R+K LFKE
Sbjct: 281 RRKELFKE 288


>sp|Y2245_SACI7|UPF0282 protein YG5714_2245|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 RKKSLFKE 9
R+K LFKE
Sbjct: 281 RRKELFKE 288


>sp|Y2198_SACI3|UPF0282 protein M1627_2198|Saccharolobus islandicus (strain M.16.27)

Query: 2 RKKSLFKE 9
R+K LFKE
Sbjct: 281 RRKELFKE 288


>sp|Y2116_SACI4|UPF0282 protein M1425_2116|Saccharolobus islandicus (strain M.14.25 /

Query: 2 RKKSLFKE 9
R+K LFKE
Sbjct: 281 RRKELFKE 288




328|SequenceR|1645|1636|YNKPFKRKKS

>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 KPFKRKK 9
KPF RKK
Sbjct: 277 KPFTRKK 283


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YNKPFKRK 8
Y +PF+RK
Sbjct: 395 YQRPFERK 402


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 1 YNKPF 5
YNKPF
Sbjct: 24 YNKPF 28


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NKPFKRKKS 10
+KP RKKS
Sbjct: 142 SKPIPRKKS 150


>sp|COBS_PYRIL|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YNKPFK 6
Y+KPFK
Sbjct: 137 YSKPFK 142


>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain

Query: 1 YNKPFKRKKS 10
YNK +K KK+
Sbjct: 31 YNKKYKLKKA 40


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 1 YNKPFKRKKS 10
YNK +K KK+
Sbjct: 31 YNKKYKLKKA 40


>sp|RPO1C_THEON|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus onnurineus (strain NA1)

Query: 1 YNKPFKRKKS 10
YNK +K KK+
Sbjct: 31 YNKKYKFKKA 40




329|SequenceR|1650|1641|FYQSMYNKPF

>sp|ENDAL_METKA|ENDA-LIKE protein|Methanopyrus kandleri (strain AV19 /

Query: 1 FYQSMYNKP 9
Y SMY KP
Sbjct: 23 LYSSMYGKP 31


>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 FYQSMYNKP 9
F SMYN P
Sbjct: 90 FADSMYNAP 98


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 FYQSMYNKP 9
F SMYN P
Sbjct: 90 FADSMYNAP 98


>sp|MCRG_METBF|METHYL-COENZYME M reductase subunit gamma|Methanosarcina barkeri (strain Fusaro /

Query: 1 FYQSMYNKP 9
F SMYN P
Sbjct: 88 FADSMYNAP 96


>sp|MCRZ_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 FYQSMYNKP 9
F SMYN P
Sbjct: 90 FADSMYNAP 98


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YQSMYNKPF 10
++SMY PF
Sbjct: 156 HKSMYRDPF 164


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YQSMYNKPF 10
++SMY PF
Sbjct: 156 HKSMYRDPF 164


>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FYQSMYNKP 9
F SMYN P
Sbjct: 90 FADSMYNAP 98


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 6 YNKPF 10
YNKPF
Sbjct: 24 YNKPF 28


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FYQSMYNKP 9
FY + NKP
Sbjct: 512 FYNEVVNKP 520


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FYQSMYNKPF 10
FY+++ NKP+
Sbjct: 71 FYKAVNNKPW 80


>sp|RDFA_HALVD|ROD-DETERMINING factor A|Haloferax volcanii (strain ATCC 29605

Query: 2 YQSMYN 7
YQS+YN
Sbjct: 117 YQSVYN 122


>sp|NEP1_STAMF|RIBOSOMAL RNA small subunit methyltransferase|Staphylothermus marinus (strain

Query: 4 SMYNKPF 10
S+YNKP
Sbjct: 204 SIYNKPL 210


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 FYQSMYNK 8
FY S+Y K
Sbjct: 309 FYYSLYQK 316


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 FYQSMYNK 8
FY S+Y K
Sbjct: 312 FYYSLYQK 319


>sp|PUR2_METBU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FYQSMYNK 8
FY S+Y K
Sbjct: 362 FYSSVYEK 369


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FYQSMYNKP 9
FY+ Y KP
Sbjct: 106 FYKGAYKKP 114




330|SequenceR|1655|1646|KELLKFYQSM

>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 1 KELLKFYQSM 10
+ELLK+Y+ M
Sbjct: 407 RELLKYYKMM 416


>sp|SRP54_METAC|SIGNAL recognition particle 54 kDa|Methanosarcina acetivorans (strain ATCC

Query: 1 KELLKFYQSM 10
+ELLK++++M
Sbjct: 407 RELLKYHKTM 416


>sp|SRP54_METBF|SIGNAL recognition particle 54 kDa|Methanosarcina barkeri (strain Fusaro /

Query: 1 KELLKFYQSM 10
+ELLK++++M
Sbjct: 410 RELLKYHKTM 419


>sp|Y1765_PYRFU|UPF0235 protein PF1765|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KELLKFYQSM 10
KEL+KF++ +
Sbjct: 49 KELMKFFKKL 58


>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 1 KELLKFYQS 9
KELLK+Y +
Sbjct: 411 KELLKYYST 419


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELLKFYQ 8
+LLKFYQ
Sbjct: 88 DLLKFYQ 94


>sp|SRP54_METTH|SIGNAL recognition particle 54 kDa|Methanothermobacter thermautotrophicus

Query: 1 KELLKFYQ 8
KELLK+Y+
Sbjct: 408 KELLKYYR 415


>sp|SRP54_METMA|SIGNAL recognition particle 54 kDa|Methanosarcina mazei (strain ATCC

Query: 1 KELLKFYQSM 10
+ELLK++++M
Sbjct: 410 RELLKYHKTM 419


>sp|COAD_METJA|PHOSPHOPANTETHEINE adenylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KELLKFYQSM 10
KELLKF S+
Sbjct: 17 KELLKFASSL 26


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 2 ELLKFYQ 8
+LLKFYQ
Sbjct: 3 KLLKFYQ 9


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KELLKFYQ 8
KE+LKF++
Sbjct: 12 KEILKFWE 19


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KELLKFYQ 8
KELLK YQ
Sbjct: 413 KELLKQYQ 420


>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 1 KELLKFYQSM 10
+ELLK+++ M
Sbjct: 407 RELLKYHKMM 416


>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KELLKFYQSM 10
KEL+ Y+S+
Sbjct: 4 KELVSLYESL 13




331|SequenceR|1660|1651|LAIQFKELLK

>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LAIQFKELLK 10
LA +FKELLK
Sbjct: 194 LATRFKELLK 203


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IQFKELLK 10
++FKEL+K
Sbjct: 422 LKFKELMK 429


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LAIQFKELLK 10
LAI F E+L+
Sbjct: 518 LAIHFSEILE 527


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AIQFKELLK 10
AIQ +EL+K
Sbjct: 653 AIQLRELIK 661




332|SequenceR|1665|1656|EEGIPLAIQF

>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EEGIPLAI 8
EEG+P+AI
Sbjct: 223 EEGVPVAI 230


>sp|ASSY_SULTO|ARGININOSUCCINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EEGIPLAI 8
E+GIP+AI
Sbjct: 216 EKGIPVAI 223


>sp|PSB2_PYRHO|PROTEASOME subunit beta 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EEGIPLAIQ 9
EEGI LA++
Sbjct: 159 EEGIKLAVK 167


>sp|RS4E_NATPD|SMALL ribosomal subunit protein eS4|Natronomonas pharaonis (strain ATCC

Query: 1 EEGIPLAI 8
EEG+PL I
Sbjct: 34 EEGVPLLI 41


>sp|PSB_METSF|PROTEASOME subunit beta|Methanocaldococcus sp. (strain FS406-22)

Query: 1 EEGIPLAI 8
EEGI LAI
Sbjct: 158 EEGIKLAI 165


>sp|MTMC1_METMA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EEGIPLAIQF 10
EEG LAI F
Sbjct: 91 EEGTGLAITF 100


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 1 EEGIPLAIQF 10
EEG LAI+F
Sbjct: 555 EEGAGLAIRF 564


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EEGIPLAIQF 10
+EG P+A++F
Sbjct: 236 KEGDPVAVEF 245


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EEGIPLAI 8
EEG+PL +
Sbjct: 187 EEGVPLLL 194


>sp|KAE1_PYRAR|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum arsenaticum

Query: 1 EEGIPLAI 8
+EG+PL++
Sbjct: 213 KEGVPLSV 220


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 1 EEGIPLAI 8
+EGIPL I
Sbjct: 215 DEGIPLVI 222


>sp|MTMC2_METMA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EEGIPLAIQF 10
EEG LAI F
Sbjct: 91 EEGTGLAITF 100


>sp|ASSY_HALMA|ARGININOSUCCINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EEGIPLAI 8
E+G+P+A+
Sbjct: 220 EDGVPVAV 227


>sp|Y890_METTH|UPF0292 protein MTH_890|Methanothermobacter thermautotrophicus (strain

Query: 1 EEGIPLAIQ 9
E+GIP+ I+
Sbjct: 21 EQGIPILIE 29


>sp|MTMC1_METAC|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EEGIPLAIQF 10
EEG LAI F
Sbjct: 91 EEGTGLAITF 100


>sp|Y400_METKA|UPF0200 protein MK0400|Methanopyrus kandleri (strain AV19 /

Query: 1 EEGIPLAI 8
EEGIP+ +
Sbjct: 22 EEGIPVVV 29


>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 2 EGIPLAI 8
EGIPL I
Sbjct: 216 EGIPLVI 222


>sp|ASSY_METJA|ARGININOSUCCINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEGIPLAI 8
+EG+P+AI
Sbjct: 220 KEGVPVAI 227




333|SequenceR|1670|1661|PVLLYEEGIP

>sp|THSA_SULAC|CHAPERONIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PVLLYEEG 8
PVLL++EG
Sbjct: 4 PVLLFKEG 11


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 LLYEEGI 9
LLYEEG+
Sbjct: 260 LLYEEGL 266


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 LLYEEGI 9
LLYEEG+
Sbjct: 264 LLYEEGL 270


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LLYEEGI 9
LLYEEG+
Sbjct: 264 LLYEEGL 270


>sp|ARLY_METJA|ARGININOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VLLYEEGI 9
++LYE+GI
Sbjct: 43 IMLYEQGI 50


>sp|TOP6A_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 3 LLYEEGIP 10
L YEEG+P
Sbjct: 244 LHYEEGLP 251


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PVLLYEEG 8
PVL+Y EG
Sbjct: 383 PVLVYREG 390


>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LYEEGIP 10
LY EGIP
Sbjct: 94 LYREGIP 100


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 PVLLYEEG 8
PVL+YE G
Sbjct: 1057 PVLVYENG 1064


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PVLLYEEG 8
PVL+YE G
Sbjct: 1045 PVLVYENG 1052


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 PVLLYEEG 8
PVL+YE G
Sbjct: 1048 PVLVYENG 1055


>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LYEEGIP 10
LY EGIP
Sbjct: 94 LYREGIP 100


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 LYEEGIP 10
+YE G+P
Sbjct: 68 MYESGVP 74


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LLYEEGIP 10
L+YE G+P
Sbjct: 269 LIYENGVP 276


>sp|MCRB_METVO|METHYL-COENZYME M reductase subunit beta|Methanococcus voltae

Query: 2 VLLYEEGIP 10
+L YE G+P
Sbjct: 337 ILEYETGLP 345


>sp|MCRB_METVA|METHYL-COENZYME M reductase subunit beta|Methanococcus vannielii

Query: 2 VLLYEEGIP 10
+L YE G+P
Sbjct: 337 ILEYETGLP 345


>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LLYEEGIP 10
L+YE G+P
Sbjct: 270 LIYENGVP 277


>sp|TOP6A_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LLYEEGIP 10
L YEEG+P
Sbjct: 241 LHYEEGLP 248


>sp|TOP6A_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 3 LLYEEGIP 10
L YEEG+P
Sbjct: 241 LHYEEGLP 248


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 5 YEEGIP 10
Y+EGIP
Sbjct: 48 YKEGIP 53


>sp|TOP6A_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LLYEEGIP 10
L YEEG+P
Sbjct: 241 LHYEEGLP 248


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PVLLYEEGI 9
PVL EEGI
Sbjct: 604 PVLKAEEGI 612


>sp|MCRY_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 2 VLLYEEGIP 10
+L YE G+P
Sbjct: 337 ILEYETGLP 345


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 VLLYEEGIP 10
+L YE G+P
Sbjct: 337 ILEYETGLP 345


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 VLLYEEGIP 10
+L YE G+P
Sbjct: 337 ILEYETGLP 345


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 1 PVLLYEEG 8
PVLL +EG
Sbjct: 4 PVLLLKEG 11


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PVLLYEEG 8
PVLL +EG
Sbjct: 4 PVLLLKEG 11


>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 3 LLYEEGI 9
LYEEGI
Sbjct: 203 FLYEEGI 209


>sp|THSA_SULTO|CHAPERONIN subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PVLLYEEG 8
PVLL +EG
Sbjct: 5 PVLLLKEG 12


>sp|RL7A_META3|LARGE ribosomal subunit protein eL8|Methanococcus aeolicus (strain ATCC

Query: 1 PVLLYEEGIP 10
P++ E+GIP
Sbjct: 62 PIICEEKGIP 71


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 PVLLYEEGI 9
P+++Y EG+
Sbjct: 984 PIVVYREGV 992


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PVLLYEEG 8
PV +YE G
Sbjct: 188 PVFVYERG 195


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 2 VLLYEEGI 9
VLLYEE +
Sbjct: 186 VLLYEEEV 193


>sp|MCRB_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VLLYEEGIP 10
+L YE G+P
Sbjct: 341 ILEYETGLP 349


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VLLYEEGIP 10
+L YE G+P
Sbjct: 338 ILEYETGLP 346


>sp|AROB_PYRNV|3-DEHYDROQUINATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PVLLYEEGI 9
PV+L EEG+
Sbjct: 30 PVVLAEEGL 38


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PVLLYEEGI 9
PVL EEG+
Sbjct: 606 PVLKAEEGV 614


>sp|AROB_PYRIL|3-DEHYDROQUINATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PVLLYEEGI 9
PV+L EEG+
Sbjct: 30 PVVLAEEGL 38


>sp|ARGC_METMP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VLLYEEGIP 10
+ ++EEG+P
Sbjct: 271 IRIFEEGMP 279


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVLLYE 6
PVLLYE
Sbjct: 181 PVLLYE 186


>sp|AROB_PYRAE|3-DEHYDROQUINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PVLLYEEGI 9
PV+L EEG+
Sbjct: 30 PVVLIEEGL 38


>sp|Y1024_METJA|UNCHARACTERIZED protein MJ1024|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VLLYEEGIP 10
VLLYEE +
Sbjct: 384 VLLYEENLT 392




334|SequenceR|1675|1666|DSLSSPVLLY

>sp|Y1499_SULAC|PROBABLE glycosyltransferase Saci_1499|Sulfolobus acidocaldarius (strain

Query: 1 DSLSSPVLLY 10
D L+SP LL+
Sbjct: 331 DPLNSPALLF 340




335|SequenceR|1680|1671|IVPRHDSLSS

>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 2 VPRHDSL 8
VPRHD +
Sbjct: 358 VPRHDEI 364


>sp|DPHB_THEAC|DIPHTHINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VPRHDSLSS 10
+P HD+L+S
Sbjct: 171 IPLHDALAS 179


>sp|RPO5_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo5|Archaeoglobus fulgidus (strain ATCC

Query: 1 IVPRHDSLS 9
+VP+H+ LS
Sbjct: 10 LVPKHEVLS 18


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 1 IVPRHDS 7
+VP HDS
Sbjct: 70 VVPPHDS 76


>sp|RPO5_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo5|Sulfurisphaera tokodaii (strain DSM

Query: 1 IVPRHDSLS 9
+VP+H+ LS
Sbjct: 16 LVPKHEVLS 24


>sp|RPO5_METS5|DNA-DIRECTED RNA polymerase subunit Rpo5|Metallosphaera sedula (strain ATCC

Query: 1 IVPRHDSLS 9
+VP+H+ LS
Sbjct: 15 LVPKHEVLS 23


>sp|RPO5_STAMF|DNA-DIRECTED RNA polymerase subunit Rpo5|Staphylothermus marinus (strain ATCC

Query: 1 IVPRHDSLS 9
+VP+H+ LS
Sbjct: 13 LVPKHEVLS 21


>sp|RPO5_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus shibatae (strain ATCC

Query: 1 IVPRHDSLS 9
+VP+H+ LS
Sbjct: 16 LVPKHEVLS 24


>sp|RPO5_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 IVPRHDSLS 9
+VP+H+ LS
Sbjct: 16 LVPKHEVLS 24


>sp|RPO5_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 IVPRHDSLS 9
+VP+H+ LS
Sbjct: 16 LVPKHEVLS 24


>sp|RPO5_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 IVPRHDSLS 9
+VP+H+ LS
Sbjct: 16 LVPKHEVLS 24


>sp|RPO5_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 IVPRHDSLS 9
+VP+H+ LS
Sbjct: 16 LVPKHEVLS 24


>sp|RPO5_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 IVPRHDSLS 9
+VP+H+ LS
Sbjct: 16 LVPKHEVLS 24


>sp|RPO5_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 IVPRHDSLS 9
+VP+H+ LS
Sbjct: 16 LVPKHEVLS 24




336|SequenceR|1685|1676|CHPLEIVPRH

>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 CHPLEIVP 8
CH +E+VP
Sbjct: 333 CHRIEVVP 340


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PLEIVPRH 10
PL++ PRH
Sbjct: 262 PLDLEPRH 269


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CHPLEIVP 8
C PLE+ P
Sbjct: 398 CTPLEVFP 405


>sp|CCA_ARCFU|CCA-ADDING enzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HPLEIVP 8
HPLEI P
Sbjct: 258 HPLEIEP 264


>sp|DPM1_PYRFU|DOLICHOL-PHOSPHATE mannosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HPLEIVPR 9
HP E++P+
Sbjct: 94 HPPEVIPK 101


>sp|Y865_METJA|PUTATIVE methylthiotransferase MJ0865|Methanocaldococcus jannaschii (strain

Query: 2 HPLEIVPR 9
HPL ++P+
Sbjct: 150 HPLPLIPK 157


>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 2 HPLEIVP 8
HPL I+P
Sbjct: 305 HPLSILP 311


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PLEIVPRH 10
PLE + RH
Sbjct: 95 PLEFITRH 102


>sp|HUTI_HALMA|IMIDAZOLONEPROPIONASE marismortui (strain ATCC 43049

Query: 2 HPLEIVP 8
HP+++VP
Sbjct: 170 HPVDVVP 176


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 HPLEIVPRH 10
HP+ PRH
Sbjct: 179 HPVGWCPRH 187


>sp|RS9_SULTO|SMALL ribosomal subunit protein uS9|Sulfurisphaera tokodaii (strain DSM

Query: 3 PLEIVP 8
PLEI+P
Sbjct: 36 PLEIIP 41


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PLEIVPR 9
PL+IVP+
Sbjct: 72 PLDIVPK 78


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 HPLEIVPRH 10
HP+ PRH
Sbjct: 179 HPVGWCPRH 187


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 HPLEIVPRH 10
HP+ PRH
Sbjct: 179 HPVGWCPRH 187


>sp|ILVC_METAC|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 2 HPLEIV 7
HPLE+V
Sbjct: 312 HPLEVV 317


>sp|ENDA_ARCFU|TRNA-SPLICING endonuclease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HPLEIV 7
HPLE+V
Sbjct: 31 HPLEVV 36


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HPLEIVPRH 10
HP+ PRH
Sbjct: 179 HPVGWCPRH 187


>sp|ARAD_SACS2|ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HPLEIV 7
HP+EIV
Sbjct: 30 HPMEIV 35


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HPLEIVPRH 10
HP+ PRH
Sbjct: 179 HPVGWCPRH 187


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 HPLEIVP 8
HPL ++P
Sbjct: 81 HPLSMIP 87


>sp|ILVC_PYRIL|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum islandicum (strain DSM 4184

Query: 2 HPLEIV 7
HP+EIV
Sbjct: 312 HPIEIV 317


>sp|ILVC_METAR|KETOL-ACID reductoisomerase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 2 HPLEIV 7
HP+EIV
Sbjct: 312 HPIEIV 317


>sp|DPHB_PYRCJ|DIPHTHINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 HPLEIVP 8
HP+E+VP
Sbjct: 102 HPVEVVP 108


>sp|RL22_METST|LARGE ribosomal subunit protein uL22|Methanosphaera stadtmanae (strain

Query: 2 HPLEIVPRH 10
H L+I P+H
Sbjct: 23 HSLKISPKH 31




337|SequenceR|1690|1681|IESNECHPLE

>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 2 ESNECHPLE 10
+SNEC P E
Sbjct: 476 QSNECTPNE 484


>sp|PELO_PYRAE|PROTEIN pelota homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IESNECHPLE 10
IE NE PLE
Sbjct: 107 IEKNEDKPLE 116


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SNECHP 8
SNEC+P
Sbjct: 545 SNECYP 550


>sp|SRP19_META3|SIGNAL recognition particle 19 kDa|Methanococcus aeolicus (strain ATCC

Query: 1 IESNECHPLE 10
I N+CHP E
Sbjct: 50 IVKNKCHPKE 59


>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IESNECHPL 9
+ESNE +PL
Sbjct: 278 VESNERNPL 286


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SNECHP 8
SNEC+P
Sbjct: 564 SNECYP 569


>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 SNECHPLE 10
S+E HPL+
Sbjct: 289 SSELHPLD 296


>sp|TSR3_METST|16S rRNA aminocarboxypropyltransferase|Methanosphaera stadtmanae

Query: 3 SNECHP 8
SNEC P
Sbjct: 9 SNECDP 14




338|SequenceR|1695|1686|YLRIIIESNE

>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 YLRIIIESN 9
YLR+I E+N
Sbjct: 366 YLRVIFENN 374


>sp|RL22_AERPE|LARGE ribosomal subunit protein uL22|Aeropyrum pernix (strain ATCC

Query: 1 YLRIIIESNE 10
YLR +IE E
Sbjct: 49 YLRAVIEKRE 58


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLRIIIESN 9
YL+II+E N
Sbjct: 567 YLKIIVEFN 575


>sp|TRPD_SULAC|ANTHRANILATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 YLRIIIESN 9
+LR IIESN
Sbjct: 318 HLRRIIESN 326


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 YLRIIIESNE 10
YL I+ E+NE
Sbjct: 369 YLEIMFENNE 378


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 1 YLRIIIESNE 10
Y+R++IE +E
Sbjct: 311 YVRMLIEGDE 320


>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 YLRIIIESNE 10
Y+RI +ES +
Sbjct: 417 YIRITLESKD 426


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 LRIIIESN 9
+RII+ESN
Sbjct: 511 VRIILESN 518


>sp|NADA_METJA|QUINOLINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRIIIESNE 10
LRI++ES++
Sbjct: 220 LRIVLESDD 228


>sp|RL6_THEVO|LARGE ribosomal subunit protein uL6|Thermoplasma volcanium (strain ATCC

Query: 1 YLRIIIESNE 10
Y+R+++E N+
Sbjct: 42 YVRLLVEDNK 51




339|SequenceR|1700|1691|FYPMEYLRII

>sp|DPM1L_HALVD|DOLICHYL-PHOSPHATE hexose transferase HVO_1613|Haloferax volcanii (strain ATCC 29605

Query: 2 YPMEYL 7
YPMEYL
Sbjct: 93 YPMEYL 98


>sp|Y697_METVS|MEMO1 family protein Mevan_0697|Methanococcus vannielii (strain ATCC

Query: 1 FYPMEYLRII 10
FYP+EY +I
Sbjct: 11 FYPLEYHDLI 20


>sp|PCNA_PICTO|DNA polymerase sliding clamp|Picrophilus torridus (strain ATCC 700027

Query: 2 YPMEYL 7
YP+EYL
Sbjct: 192 YPLEYL 197


>sp|GGR_METAR|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 YPMEYLR 8
+P+EYLR
Sbjct: 234 HPIEYLR 240


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 2 YPMEY 6
YPMEY
Sbjct: 840 YPMEY 844


>sp|PCNA_THEVO|DNA polymerase sliding clamp|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YPMEYL 7
YP+EYL
Sbjct: 192 YPLEYL 197


>sp|PCNA_THEAC|DNA polymerase sliding clamp|Thermoplasma acidophilum (strain ATCC

Query: 2 YPMEYL 7
YP+EYL
Sbjct: 192 YPLEYL 197


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FYPMEYLRII 10
F P EYLR I
Sbjct: 188 FGPFEYLRRI 197


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 FYPMEYLRII 10
++P +YL II
Sbjct: 326 YFPEDYLTII 335


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PMEYLRII 10
PM YL++I
Sbjct: 210 PMTYLKVI 217


>sp|Y191_METM5|MEMO1 family protein MmarC5_0191|Methanococcus maripaludis (strain C5 /

Query: 1 FYPMEYLRII 10
FYP EY ++
Sbjct: 11 FYPAEYHELL 20


>sp|GCH1_PYRAE|GTP cyclohydrolase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FYPMEY 6
F+P+EY
Sbjct: 58 FFPLEY 63


>sp|GCH1_PYRNV|GTP cyclohydrolase 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 FYPMEY 6
F+P+EY
Sbjct: 58 FFPLEY 63


>sp|Y1286_METM6|MEMO1 family protein MmarC6_1286|Methanococcus maripaludis (strain C6 /

Query: 1 FYPMEYLRII 10
FYP EY ++
Sbjct: 11 FYPAEYHELL 20


>sp|TDXH1_SULME|PEROXIREDOXIN 1|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 1 FYPMEYLRII 10
+YP+EY R I
Sbjct: 136 YYPIEYGRKI 145


>sp|Y1515_METJA|UNCHARACTERIZED protein MJ1515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FYPMEYLRII 10
FYP ++R+I
Sbjct: 37 FYPDGFVRVI 46


>sp|HFLX_HYPBU|GTPASE HflX|Hyperthermus butylicus (strain DSM 5456

Query: 3 PMEYLRII 10
P EY RI+
Sbjct: 83 PREYFRIV 90


>sp|Y1387_METMP|MEMO1 family protein MMP1387|Methanococcus maripaludis (strain DSM

Query: 1 FYPMEYLRII 10
FYP EY ++
Sbjct: 11 FYPAEYHELL 20


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 2 YPMEYLRII 10
YP E LR++
Sbjct: 206 YPREVLRVL 214


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 FYPMEYLRII 10
++P +YL II
Sbjct: 326 YFPDDYLTII 335


>sp|Y1496_PYRFU|UPF0252 protein PF1496|Pyrococcus furiosus (strain ATCC 43587

Query: 4 MEYLRII 10
+EYLRII
Sbjct: 39 LEYLRII 45


>sp|Y310_ARCFU|UNCHARACTERIZED protein AF_0310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YPMEYLR 8
YP +YLR
Sbjct: 160 YPSDYLR 166


>sp|TRUA_NANEQ|TRNA pseudouridine synthase A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 YPMEYLRII 10
YP+EY+ ++
Sbjct: 176 YPLEYIDLV 184




340|SequenceR|1705|1696|WFGMPFYPME

>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GMPFYPM 9
G+P+YPM
Sbjct: 229 GVPYYPM 235


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GMPFYPM 9
G P+YPM
Sbjct: 229 GTPYYPM 235


>sp|Y836_METJA|UNCHARACTERIZED protein MJ0836|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WFGMPFYPME 10
W PFYP E
Sbjct: 36 WCYCPFYPCE 45


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 4 MPFYP 8
MPFYP
Sbjct: 222 MPFYP 226


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 4 MPFYP 8
MPFYP
Sbjct: 222 MPFYP 226


>sp|Y1546_PYRCJ|UPF0282 protein Pcal_1546|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 FGMPFYPME 10
FG+P +P+E
Sbjct: 40 FGLPPHPLE 48


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 WFGMPFYPME 10
++ +P+YP++
Sbjct: 365 YYDIPYYPLK 374


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 FGMPFYP 8
+G+PF+P
Sbjct: 561 YGVPFHP 567


>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 2 FGMPFYPME 10
+G+P YP+E
Sbjct: 153 YGIPKYPLE 161


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 GMPFY 7
GMPFY
Sbjct: 150 GMPFY 154


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 GMPFYPM 9
GMPF P+
Sbjct: 590 GMPFRPL 596


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 4 MPFYPME 10
MP YP+E
Sbjct: 945 MPRYPLE 951


>sp|Y695_THEPD|UPF0201 protein Tpen_0695|Thermofilum pendens (strain DSM 2475

Query: 5 PFYPME 10
PFYP E
Sbjct: 8 PFYPTE 13


>sp|SYK_METHJ|LYSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GMPFYPME 10
G+P YP E
Sbjct: 24 GVPMYPHE 31


>sp|MCH_METBU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 2 FGMPFY 7
FG PFY
Sbjct: 262 FGKPFY 267


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 WFGMPFYPME 10
++ +P+YP++
Sbjct: 365 YYEVPYYPLK 374


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC

Query: 2 FGMPF 6
FGMPF
Sbjct: 21 FGMPF 25


>sp|MCH_METBF|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FGMPFY 7
FG PFY
Sbjct: 263 FGKPFY 268


>sp|MCH_METMA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FGMPFY 7
FG PFY
Sbjct: 263 FGKPFY 268


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FGMPFYPM 9
FG+P+Y +
Sbjct: 30 FGVPYYEL 37


>sp|MCH_METAC|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FGMPFY 7
FG PFY
Sbjct: 263 FGKPFY 268


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 WFGMPFYPME 10
WF MPF +E
Sbjct: 45 WFKMPFGDVE 54


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 2 FGMPFYPME 10
+G+P Y ME
Sbjct: 381 YGLPLYVME 389


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 3 GMPFYPM 9
G P+YP+
Sbjct: 196 GRPYYPL 202


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 FGMPFY 7
FG+P+Y
Sbjct: 30 FGVPYY 35


>sp|Y1056_PYRAR|UPF0282 protein Pars_1056|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FGMPFYPME 10
FG+P +P E
Sbjct: 40 FGLPPHPRE 48


>sp|ULIL_METAC|ULILYSIN acetivorans (strain ATCC 35395

Query: 2 FGMPFYP 8
FG P YP
Sbjct: 267 FGCPSYP 273


>sp|TRUA_METMJ|TRNA pseudouridine synthase A|Methanoculleus marisnigri (strain ATCC

Query: 2 FGMPFYPM 9
+G+PF P+
Sbjct: 224 YGIPFTPL 231


>sp|Y3680_PYRAE|UPF0282 protein PAE3680|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FGMPFYPME 10
FG+P +P E
Sbjct: 40 FGLPPHPRE 48


>sp|CDPAS_METM6|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain C6 /

Query: 2 FGMPFYPM 9
F PFYP+
Sbjct: 138 FAYPFYPL 145


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FGMPFYPM 9
FG+P+Y +
Sbjct: 30 FGVPYYEI 37


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WFGMPFY 7
W PFY
Sbjct: 324 WLSRPFY 330


>sp|CDPAS_METM5|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain C5 /

Query: 2 FGMPFYPM 9
F PFYP+
Sbjct: 138 FAYPFYPL 145


>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WFGMPFYPME 10
W G+ FY M+
Sbjct: 315 WSGLVFYGMK 324




341|SequenceR|1710|1701|NILRSWFGMP

>sp|RS3_IGNH4|SMALL ribosomal subunit protein uS3|Ignicoccus hospitalis (strain

Query: 2 ILRSWFGMP 10
+L WFG+P
Sbjct: 73 VLEEWFGIP 81


>sp|SYS_CENSY|SERINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 ILRSWFGMP 10
+LR W G P
Sbjct: 122 VLRKWVGTP 130


>sp|RS15_METM7|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain

Query: 1 NILRSWFGMP 10
NILR +G+P
Sbjct: 52 NILRDMYGVP 61


>sp|RS15_METVS|SMALL ribosomal subunit protein uS15|Methanococcus vannielii (strain

Query: 1 NILRSWFGMP 10
NILR +G+P
Sbjct: 52 NILRDMYGIP 61


>sp|RS15_METMP|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain

Query: 1 NILRSWFGMP 10
NILR +G+P
Sbjct: 52 NILRDMYGVP 61


>sp|RS15_METM5|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain

Query: 1 NILRSWFGMP 10
NILR +G+P
Sbjct: 52 NILRDMYGVP 61


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 NILRSWF 7
N LRSWF
Sbjct: 452 NKLRSWF 458


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ILRSWFGMP 10
++ SW GMP
Sbjct: 346 LIASWLGMP 354


>sp|LYSM_SACS2|HTH-TYPE transcriptional regulator LysM|Saccharolobus solfataricus (strain

Query: 2 ILRSWF 7
ILR+WF
Sbjct: 137 ILRTWF 142


>sp|RS15_HYPBU|SMALL ribosomal subunit protein uS15|Hyperthermus butylicus (strain DSM

Query: 2 ILRSWFGMP 10
ILR FG+P
Sbjct: 52 ILRDQFGIP 60


>sp|Y640_PYRHO|PUTATIVE phosphate permease PH0640|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ILRSWFGMP 10
++ SW GMP
Sbjct: 341 LIASWLGMP 349


>sp|Y1401_PYRAB|PUTATIVE phosphate permease PYRAB14010|Pyrococcus abyssi (strain GE5 /

Query: 2 ILRSWFGMP 10
++ SW GMP
Sbjct: 340 LIASWLGMP 348


>sp|TRPB1_PYRAB|TRYPTOPHAN synthase beta chain 1|Pyrococcus abyssi (strain GE5 /

Query: 3 LRSWFGMP 10
LR+W G P
Sbjct: 43 LRTWAGRP 50


>sp|THIM_HALWD|HYDROXYETHYLTHIAZOLE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NILRSWFGMP 10
NI+ W G+P
Sbjct: 44 NIILHWGGLP 53


>sp|THII_THEKO|PROBABLE tRNA sulfurtransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 LRSWFGMP 10
+R+W G+P
Sbjct: 169 IRAWGGLP 176


>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 3 LRSWFGMP 10
LR+W G P
Sbjct: 46 LRNWAGRP 53


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 3 LRSWFG 8
L SWFG
Sbjct: 340 LESWFG 345


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 3 LRSWFG 8
L SWFG
Sbjct: 334 LESWFG 339


>sp|FEN_THEKO|FLAP endonuclease 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LRSWFG 8
L SWFG
Sbjct: 334 LESWFG 339


>sp|PSTB2_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain ATCC

Query: 3 LRSWFG 8
LRSW G
Sbjct: 146 LRSWLG 151


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 NILRSWFGMP 10
NI+ SW +P
Sbjct: 31 NIINSWKPLP 40


>sp|RS15_IGNH4|SMALL ribosomal subunit protein uS15|Ignicoccus hospitalis (strain

Query: 2 ILRSWFGMP 10
ILR FG+P
Sbjct: 51 ILRDQFGVP 59


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 NILRSWF 7
N+LR+W
Sbjct: 504 NVLRNWL 510


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 NILRSW 6
N+LR+W
Sbjct: 504 NVLRNW 509


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 NILRSW 6
N+LR+W
Sbjct: 504 NVLRNW 509


>sp|Y727_METTH|UPF0280 protein MTH_727|Methanothermobacter thermautotrophicus (strain

Query: 1 NILRSWFG 8
N+L SW G
Sbjct: 9 NVLESWCG 16


>sp|SECY_HALVD|PROTEIN translocase subunit SecY|Haloferax volcanii (strain ATCC 29605

Query: 5 SWFGMP 10
SW GMP
Sbjct: 315 SWVGMP 320


>sp|PDXT_HALSA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Halobacterium salinarum (strain

Query: 2 ILRSWFGMP 10
+L SW G P
Sbjct: 155 VLASWDGRP 163


>sp|PDXT_HALS3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Halobacterium salinarum (strain

Query: 2 ILRSWFGMP 10
+L SW G P
Sbjct: 155 VLASWDGRP 163


>sp|Y2061_THEKO|PUTATIVE phosphate permease TK2061|Thermococcus kodakarensis (strain ATCC

Query: 2 ILRSWFGMP 10
++ SW G+P
Sbjct: 341 LVASWLGLP 349




342|SequenceR|1715|1706|IELLRNILRS

>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IELLRNILRS 10
IEL RN++RS
Sbjct: 72 IELQRNLIRS 81


>sp|MFNB_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IELLRNILRS 10
+EL++N++R+
Sbjct: 98 VELMKNVVRA 107


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IELLRNILR 9
+ +LRNILR
Sbjct: 169 VPVLRNILR 177


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC

Query: 1 IELLRNILRS 10
IEL +N++RS
Sbjct: 72 IELQKNLIRS 81


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IELLRNILR 9
IE L+N+LR
Sbjct: 299 IEKLKNLLR 307


>sp|DPCKG_THEPD|GTP-DEPENDENT dephospho-CoA kinase|Thermofilum pendens (strain DSM 2475

Query: 2 ELLRNILRS 10
ELLRN+L S
Sbjct: 100 ELLRNLLTS 108


>sp|MRAY_METTH|PUTATIVE phospho-N-acetylmuramoyl-pentapeptide-

Query: 3 LLRNILRS 10
+RNILRS
Sbjct: 21 FIRNILRS 28


>sp|COFC_METMP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IELLRNIL 8
IEL++NIL
Sbjct: 28 IELIKNIL 35


>sp|COFC_METM7|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 IELLRNIL 8
IEL++NIL
Sbjct: 28 IELIKNIL 35


>sp|COFC_METM5|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 IELLRNIL 8
IEL++NIL
Sbjct: 28 IELIKNIL 35


>sp|COFC_METM6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 IELLRNIL 8
IEL++NIL
Sbjct: 28 IELIKNIL 35




343|SequenceR|1720|1711|LMYPSIELLR

>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 2 MYPSIELLR 10
+YPSI++LR
Sbjct: 102 LYPSIDMLR 110


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YPSIELLR 10
YPSI++LR
Sbjct: 106 YPSIDMLR 113


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YPSIELLR 10
YPSI++LR
Sbjct: 106 YPSIDMLR 113


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YPSIELLR 10
YPSI++LR
Sbjct: 106 YPSIDMLR 113


>sp|RL6_METMP|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 LMYPSIEL 8
LMYP IE+
Sbjct: 39 LMYPGIEI 46


>sp|RL6_METM5|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 LMYPSIEL 8
LMYP IE+
Sbjct: 39 LMYPGIEI 46


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 YPSIELLR 10
YPSIE++R
Sbjct: 112 YPSIEMIR 119


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 YPSIELLR 10
+PSIE+LR
Sbjct: 99 HPSIEMLR 106


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PSIELLR 10
PS+ELLR
Sbjct: 105 PSVELLR 111


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 4 PSIELLR 10
PS+ELLR
Sbjct: 105 PSVELLR 111


>sp|AROE_PYRAB|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 2 MYPSIELLR 10
+YP +EL+R
Sbjct: 246 IYPDVELMR 254


>sp|GSA_ARCFU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YPSIELLR 10
+PS+E+LR
Sbjct: 102 FPSMEMLR 109


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LMYPSIELLR 10
++YP ELLR
Sbjct: 400 IVYPEFELLR 409


>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 YPSIELLR 10
+PSIE++R
Sbjct: 101 HPSIEMVR 108


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 4 PSIELLR 10
PS+E+LR
Sbjct: 104 PSVEMLR 110


>sp|RL6_METM7|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 LMYPSIEL 8
L+YP IE+
Sbjct: 39 LLYPGIEI 46


>sp|RL6_METM6|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 LMYPSIEL 8
L+YP IE+
Sbjct: 39 LLYPGIEI 46


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila

Query: 1 LMYPSIELLR 10
L YP IE+ R
Sbjct: 37 LWYPDIEIKR 46


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 YPSIELLR 10
+PSIE++R
Sbjct: 101 HPSIEMVR 108


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 3 YPSIELLR 10
Y SIE+LR
Sbjct: 120 YESIEILR 127




344|SequenceR|1725|1716|RERGSLMYPS

>sp|SYK_METMJ|LYSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RERGSLMYP 9
RERG +YP
Sbjct: 21 RERGVTVYP 29


>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ERGSLMYP 9
E G MYP
Sbjct: 327 ENGGFMYP 334


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RERGSLMY 8
RE+G+L+Y
Sbjct: 83 REQGALIY 90


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 4 GSLMYP 9
G+LMYP
Sbjct: 192 GNLMYP 197




345|SequenceR|1730|1721|NPRLARERGS

>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 1 NPRLARERGS 10
NPRL RE G
Sbjct: 93 NPRLYREEGD 102


>sp|RL4_METJA|LARGE ribosomal subunit protein uL4|Methanocaldococcus jannaschii (strain

Query: 1 NPRLARERG 9
NP L +ERG
Sbjct: 121 NPELVKERG 129


>sp|THIE_THEVO|THIAMINE-PHOSPHATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NPRLARERGS 10
+P+LA+E G+
Sbjct: 71 DPKLAKEAGA 80


>sp|COBQ_METMJ|PROBABLE cobyric acid synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RLARERG 9
RLARERG
Sbjct: 314 RLARERG 320


>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 1 NPRLARER 8
NP L RER
Sbjct: 343 NPDLVRER 350


>sp|TOP6A_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NPRLARERGS 10
N LAR RGS
Sbjct: 90 NEHLARNRGS 99


>sp|KCY_METMA|CYTIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RLARERG 9
R+ARERG
Sbjct: 37 RMARERG 43


>sp|UPP_AERPE|URACIL phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RLARERGS 10
RLAR+RG+
Sbjct: 149 RLARDRGA 156


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RLARERG 9
RLARE+G
Sbjct: 144 RLAREKG 150


>sp|NPD2_PYRAE|NAD-DEPENDENT protein deacylase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PRLARERGS 10
PR+A+E G+
Sbjct: 194 PRIAKEAGA 202


>sp|CAS8_THETK|CRISPR system associated protein Cas8|Thermoproteus tenax (strain ATCC

Query: 2 PRLARERGS 10
P++AR+ GS
Sbjct: 306 PKIARQLGS 314




346|SequenceR|1735|1726|RWYMRNPRLA

>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RWYMRNPR 8
RW +R PR
Sbjct: 186 RWPVRKPR 193


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 RWYMRNPR 8
RW +R PR
Sbjct: 192 RWPVRQPR 199


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 RWYMRNPR 8
RW +R PR
Sbjct: 186 RWPVRRPR 193


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RWYMRNPR 8
RW +R+PR
Sbjct: 192 RWPVRDPR 199


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 1 RWYMRNPR 8
RW +R PR
Sbjct: 186 RWPVRRPR 193


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RWYMRNPR 8
RW +R PR
Sbjct: 192 RWPVRKPR 199


>sp|PELO_THEAC|PROTEIN pelota homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WYMRN 6
WY+RN
Sbjct: 24 WYLRN 28


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WYMRNPRL 9
W MR+P L
Sbjct: 230 WPMRHPEL 237


>sp|Y1633_ARCFU|UNCHARACTERIZED protein AF_1633|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WYMRNP 7
W+++NP
Sbjct: 162 WFLQNP 167


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 1 RWYMRNPRL 9
+WY NP L
Sbjct: 15 KWYNINPDL 23


>sp|SYW_SACS2|TRYPTOPHAN--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YMRNPRL 9
YMRNP
Sbjct: 117 YMRNPEF 123


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RWYMRNPR 8
RW +R PR
Sbjct: 199 RWPIRRPR 206


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 1 RWYMRN 6
RW MRN
Sbjct: 300 RWEMRN 305


>sp|RNP3_THEKO|RIBONUCLEASE P protein component 3|Thermococcus kodakarensis (strain ATCC

Query: 1 RWYMRNPR 8
RW +R PR
Sbjct: 182 RWEVRGPR 189


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 2 WYMRNP 7
W+ RNP
Sbjct: 297 WFERNP 302




347|SequenceR|1740|1731|LYIGQRWYMR

>sp|SYK_SULAC|LYSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YIGQRWYMR 10
Y+ + WY+R
Sbjct: 218 YLNENWYLR 226


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YIGQRWYMR 10
Y+ + WY+R
Sbjct: 214 YLNEDWYLR 222


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 2 YIGQRWYMR 10
+I RWY R
Sbjct: 500 WINSRWYSR 508


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 6 RWYMR 10
RWYMR
Sbjct: 765 RWYMR 769


>sp|SYK_METHJ|LYSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YIGQRWYMR 10
++GQ+ Y+R
Sbjct: 218 FLGQKLYLR 226


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LYIGQRW 7
LYI Q+W
Sbjct: 363 LYIFQKW 369


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 2 YIGQRWY 8
Y+G+R+Y
Sbjct: 784 YLGERYY 790


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GQRWYM 9
G RWY+
Sbjct: 197 GDRWYV 202


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 4 GQRWYM 9
G RWY+
Sbjct: 197 GDRWYV 202


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YIGQRWYMR 10
++ RWY R
Sbjct: 501 WVNARWYSR 509


>sp|Y378_METTH|UPF0104 membrane protein MTH_378|Methanothermobacter thermautotrophicus

Query: 3 IGQRWYMR 10
IGQ W MR
Sbjct: 63 IGQPWRMR 70


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 RWYMR 10
RWY+R
Sbjct: 742 RWYLR 746


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 RWYMR 10
RWY+R
Sbjct: 765 RWYLR 769


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YIGQRW 7
YIG++W
Sbjct: 428 YIGEKW 433


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 RWYMR 10
RWY+R
Sbjct: 765 RWYLR 769


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 6 RWYMR 10
RWY+R
Sbjct: 765 RWYLR 769


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 RWYMR 10
RWY+R
Sbjct: 765 RWYLR 769




348|SequenceR|1745|1736|EPSWNLYIGQ

>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EPSWNLYIGQ 10
EP WN +G+
Sbjct: 189 EPYWNTIVGE 198


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 1 EPSWNL 6
EPSW L
Sbjct: 145 EPSWKL 150


>sp|SYY2_PYRAE|TYROSINE--TRNA ligase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EPSWNLYIG 9
EP W ++IG
Sbjct: 30 EPLWPIHIG 38


>sp|XACK_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacK|Haloferax volcanii (strain ATCC

Query: 1 EPSWNLYIG 9
EPS NL+ G
Sbjct: 242 EPSMNLFDG 250


>sp|T2M6_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 3 SWNLYIGQ 10
SW YIG
Sbjct: 50 SWRTYIGH 57


>sp|RNFD_METAC|ION-TRANSLOCATING oxidoreductase complex subunit D|Methanosarcina acetivorans (strain

Query: 2 PSWNLYIG 9
P+W ++IG
Sbjct: 93 PAWMIFIG 100


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 EPSWNLYIGQ 10
+PSW +GQ
Sbjct: 133 KPSWIWNVGQ 142


>sp|Y943_METJA|UNCHARACTERIZED protein MJ0943|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPSWNLYI 8
EP++N YI
Sbjct: 123 EPAYNYYI 130


>sp|FLUC_PYRHO|FLUORIDE-SPECIFIC ion channel FluC|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PSWNLYIG 9
P W +++G
Sbjct: 63 PEWRIFLG 70




349|SequenceR|1750|1741|VLCYAEPSWN

>sp|TSR3_THEVO|16S rRNA aminocarboxypropyltransferase|Thermoplasma volcanium (strain

Query: 2 LCYAEPSWN 10
LC E SWN
Sbjct: 63 LCVIEGSWN 71


>sp|CFBA_METMA|SIROHYDROCHLORIN cobaltochelatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LCYAEP 7
LCYA+P
Sbjct: 106 LCYAKP 111


>sp|CFBA_METAC|SIROHYDROCHLORIN cobaltochelatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LCYAEP 7
LCYA+P
Sbjct: 106 LCYAKP 111


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 LCYAEPSWN 10
+C+ P+W+
Sbjct: 851 VCFGTPNWH 859


>sp|CBIT_METTH|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 VLCYAEPSWN 10
++C AEP N
Sbjct: 25 IMCLAEPGKN 34


>sp|METE_PYRFU|METHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VLCYAEPSW 9
V Y EP W
Sbjct: 279 VFTYLEPEW 287


>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter thermautotrophicus

Query: 1 VLCYAEPSW 9
V+CY SW
Sbjct: 291 VICYLAVSW 299


>sp|CFBA_METBF|SIROHYDROCHLORIN cobaltochelatase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LCYAEP 7
LCYA P
Sbjct: 106 LCYANP 111


>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LCYAEPS 8
+CY EP+
Sbjct: 40 VCYVEPT 46


>sp|PYRB_HALWD|ASPARTATE carbamoyltransferase catalytic subunit|Haloquadratum walsbyi

Query: 2 LCYAEPS 8
LC+ EPS
Sbjct: 45 LCFFEPS 51


>sp|PYRB_HALLT|ASPARTATE carbamoyltransferase catalytic subunit|Halorubrum lacusprofundi

Query: 2 LCYAEPS 8
LC+ EPS
Sbjct: 45 LCFFEPS 51


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VLCYAEPSWN 10
V C E SW+
Sbjct: 307 VFCKPEDSWD 316


>sp|SYS_PICTO|SERINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 VLCYAEPSWN 10
V C E SW+
Sbjct: 306 VFCKPEDSWD 315


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 LCYAEPSWN 10
LCYA+ +N
Sbjct: 470 LCYAKAGFN 478


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 AEPSWN 10
A+P+WN
Sbjct: 212 ADPNWN 217


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 4 YAEPSWN 10
YA P WN
Sbjct: 385 YANPKWN 391


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLCYAEPSW 9
V C E SW
Sbjct: 306 VFCLPEQSW 314


>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 1 VLCYAEPSWN 10
VLCY E N
Sbjct: 201 VLCYIEDCTN 210




350|SequenceR|1755|1746|LVESGVLCYA

>sp|SAHH_ARCFU|ADENOSYLHOMOCYSTEINASE fulgidus (strain ATCC 49558

Query: 1 LVESGVLCYA 10
L ESG+ CYA
Sbjct: 77 LRESGIACYA 86


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 1 LVESGVLCY 9
L E+G++C+
Sbjct: 180 LTEAGIICH 188


>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 ESGVLCY 9
ESG +CY
Sbjct: 88 ESGPICY 94


>sp|PURQ_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothrix thermoacetophila (strain DSM

Query: 1 LVESGVLCYA 10
LVESG+L +
Sbjct: 93 LVESGILPFG 102


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LVESGVL 7
LVESG+L
Sbjct: 347 LVESGIL 353


>sp|SFSA_PYRNV|SUGAR fermentation stimulation protein homolog|Pyrobaculum neutrophilum

Query: 1 LVESGVL 7
L+ESGVL
Sbjct: 93 LIESGVL 99


>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 5 GVLCY 9
GVLCY
Sbjct: 200 GVLCY 204


>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVESGVLCYA 10
LVESG++ Y
Sbjct: 125 LVESGLIKYG 134


>sp|CPKA_PYRHO|CARBAMATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LVESGVLCYA 10
LVESG++ A
Sbjct: 182 LVESGIIVIA 191


>sp|TMG10_METTH|TRNA (guanine(10)-N2)-dimethyltransferase|Methanothermobacter

Query: 1 LVESGVLCYA 10
L E G++C A
Sbjct: 288 LAEGGMICMA 297


>sp|Y803_METJA|UNCHARACTERIZED protein MJ0803|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVESGVLCYA 10
L +G+LCY
Sbjct: 17 LALAGILCYG 26


>sp|AMT3_ARCFU|AMMONIUM transporter Amt3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 SGVLCYA 10
+GV+CYA
Sbjct: 279 AGVVCYA 285




351|SequenceR|1760|1751|EPHNDLVESG

>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PHNDLVESG 10
PH LVESG
Sbjct: 93 PHTILVESG 101


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 2 PHNDLVESG 10
P++DL+E G
Sbjct: 323 PYSDLIEKG 331


>sp|COBQ_METBU|PROBABLE cobyric acid synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 NDLVESG 10
NDLVESG
Sbjct: 310 NDLVESG 316


>sp|RS3_METB6|SMALL ribosomal subunit protein uS3|Methanoregula boonei (strain DSM

Query: 1 EPHNDLVESG 10
EP N +VE G
Sbjct: 156 EPSNTIVEKG 165


>sp|AATC_METJA|A-TYPE ATP synthase subunit C|Methanocaldococcus jannaschii (strain ATCC

Query: 4 NDLVESG 10
N+L+ESG
Sbjct: 76 NELIESG 82


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 2 PHNDL 6
PHNDL
Sbjct: 121 PHNDL 125




352|SequenceR|1765|1756|IKLFSEPHND

>sp|PSTB_METMP|PHOSPHATE import ATP-binding protein PstB|Methanococcus maripaludis (strain

Query: 2 KLFSEPHN 9
KLF EP N
Sbjct: 232 KLFVEPEN 239


>sp|RS15_PYRFU|SMALL ribosomal subunit protein uS15|Pyrococcus furiosus (strain ATCC

Query: 1 IKLFSEPHN 9
+KLF +P N
Sbjct: 63 VKLFKDPDN 71


>sp|HMD_METTF|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus

Query: 2 KLFSEPHND 10
K+F E H D
Sbjct: 181 KIFEEKHGD 189


>sp|HMD_METTW|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain Winter)

Query: 2 KLFSEPHND 10
K+F E H D
Sbjct: 181 KIFEEKHGD 189


>sp|CCA_SACS2|CCA-ADDING enzyme|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IKLFSEP 7
+K+FSEP
Sbjct: 204 MKIFSEP 210


>sp|AATE_SACS2|A-TYPE ATP synthase subunit E|Saccharolobus solfataricus (strain ATCC

Query: 1 IKLFSEPHN 9
IKL +E HN
Sbjct: 30 IKLLNEGHN 38


>sp|RS15_PYRHO|SMALL ribosomal subunit protein uS15|Pyrococcus horikoshii (strain ATCC

Query: 1 IKLFSEPHN 9
+KLF +P N
Sbjct: 63 VKLFRDPDN 71


>sp|CCA_SACI6|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IKLFSEP 7
+K+FSEP
Sbjct: 204 MKIFSEP 210


>sp|CCA_SACI4|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IKLFSEP 7
+K+FSEP
Sbjct: 204 MKIFSEP 210


>sp|CCA_SACI3|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IKLFSEP 7
+K+FSEP
Sbjct: 204 MKIFSEP 210


>sp|CCA_SACI2|CCA-ADDING enzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IKLFSEP 7
+K+FSEP
Sbjct: 204 MKIFSEP 210


>sp|HMD_METTH|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 KLFSEPHND 10
K+F E H D
Sbjct: 181 KIFEEKHGD 189


>sp|CCA_SACI1|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IKLFSEP 7
+K+FSEP
Sbjct: 204 MKIFSEP 210


>sp|CCA_SACI7|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IKLFSEP 7
+K+FSEP
Sbjct: 204 MKIFSEP 210


>sp|RS15_PYRAB|SMALL ribosomal subunit protein uS15|Pyrococcus abyssi (strain GE5 /

Query: 1 IKLFSEPHN 9
+KLF +P N
Sbjct: 63 VKLFRDPDN 71




353|SequenceR|1770|1761|CSPVTIKLFS

>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 2 SPVTIKLF 9
SP+T KLF
Sbjct: 114 SPITFKLF 121


>sp|RPIA_METTH|RIBOSE-5-PHOSPHATE isomerase A|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 CSPVTIKLFS 10
C PV +KL S
Sbjct: 143 CRPVKLKLES 152




354|SequenceR|1775|1766|ICGKRCSPVT

>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 ICGKRCSPVT 10
+CGKRC +T
Sbjct: 395 LCGKRCLILT 404


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 ICGKRCSPVT 10
+CGKRC +T
Sbjct: 395 LCGKRCLILT 404


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 CGKRCSPV 9
CG CSP+
Sbjct: 633 CGGHCSPL 640


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GKRCSP 8
G RCSP
Sbjct: 294 GNRCSP 299


>sp|GUAAA_METS3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanobrevibacter

Query: 1 ICGKRCS 7
IC KRC+
Sbjct: 182 ICKKRCN 188


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ICGKRCSPVT 10
+CG PVT
Sbjct: 442 VCGAEIEPVT 451


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ICGKRCSPVT 10
+CG PVT
Sbjct: 442 VCGAEIEPVT 451


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 ICGKRCSPVT 10
+CG PVT
Sbjct: 442 VCGAEIEPVT 451


>sp|ENDA_AERPE|TRNA-SPLICING endonuclease|Aeropyrum pernix (strain ATCC 700893

Query: 3 GKRCSPV 9
G RC+P+
Sbjct: 2 GDRCAPI 8


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ICGKRCSPV 9
+CGK PV
Sbjct: 366 LCGKEIKPV 374


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ICGKRCSPVT 10
+CG PVT
Sbjct: 485 LCGSELKPVT 494


>sp|NADA_METB6|QUINOLINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 GKRCSPVT 10
GKRC P++
Sbjct: 248 GKRCFPLS 255


>sp|Y3522_METJA|UNCHARACTERIZED protein MJECL22|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CGKRC 6
CG+RC
Sbjct: 18 CGRRC 22




355|SequenceR|1780|1771|VQGLLICGKR

>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VQGLLICG 8
V GLL CG
Sbjct: 38 VHGLLACG 45


>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 4 LLICGKR 10
L+ CGKR
Sbjct: 287 LIFCGKR 293


>sp|MTXA_METBF|PUTATIVE methyltransferase Mtx subunit A|Methanosarcina barkeri (strain

Query: 1 VQGLLICGK 9
++ +LICGK
Sbjct: 65 IRYILICGK 73


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GLLICG 8
GL++CG
Sbjct: 242 GLIVCG 247




356|SequenceR|1785|1776|DIHDVVQGLL

>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 1 DIHDVVQGLL 10
DIHDV+ G+L
Sbjct: 284 DIHDVLNGVL 293


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DIHDVVQGLL 10
+++D+++GLL
Sbjct: 52 NVYDIIRGLL 61


>sp|NCPP_PYRCJ|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum calidifontis (strain

Query: 2 IHDVVQG 8
+HDV+QG
Sbjct: 113 LHDVLQG 119


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIHDVVQGL 9
DIH +VQ L
Sbjct: 17 DIHSIVQAL 25


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IHDVVQG 8
IH+VVQG
Sbjct: 572 IHNVVQG 578


>sp|Y1460_METJA|UNCHARACTERIZED protein MJ1460|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IHDVVQGLL 10
IHD + G+L
Sbjct: 115 IHDFIAGIL 123


>sp|PYRI_PYRFU|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus furiosus (strain

Query: 1 DIHDVVQGLL 10
+I DV++G+L
Sbjct: 97 EIPDVIEGIL 106


>sp|PYRI_SULTO|ASPARTATE carbamoyltransferase regulatory chain|Sulfurisphaera tokodaii

Query: 2 IHDVVQGLL 10
I D+V+GLL
Sbjct: 100 IPDIVKGLL 108


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 IHDVVQGLL 10
+H++V+G+L
Sbjct: 615 LHELVEGVL 623


>sp|PYRI_PYRAB|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus abyssi (strain GE5

Query: 1 DIHDVVQGLL 10
++ DV++G+L
Sbjct: 97 EVPDVIEGIL 106




357|SequenceR|1790|1781|EEMLSDIHDV

>sp|Y547_METJA|UNCHARACTERIZED ATP-binding protein MJ0547|Methanocaldococcus jannaschii (strain

Query: 1 EEMLSDIHDV 10
EE+L IHD+
Sbjct: 105 EEVLKAIHDL 114


>sp|SPEE_PYRHO|POLYAMINE aminopropyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EEMLSDIHD 9
E+MLSD H+
Sbjct: 128 EKMLSDKHE 136




358|SequenceR|1795|1786|LGPFWEEMLS

>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 4 FWEEMLS 10
FWEE++S
Sbjct: 859 FWEELIS 865


>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 FWEEML 9
FWE+ML
Sbjct: 374 FWEKML 379


>sp|Y1614_METAC|MACRO domain-containing protein MA_1614|Methanosarcina acetivorans

Query: 1 LGPFWEE 7
+GP W+E
Sbjct: 102 VGPIWQE 108


>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 1 LGPFWEEM 8
G FWE+M
Sbjct: 369 FGRFWEKM 376


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 FWEEMLS 10
WE+MLS
Sbjct: 218 LWEKMLS 224


>sp|THI4_AERPE|THIAMINE thiazole synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LGPFWEE 7
LGP W E
Sbjct: 195 LGPMWVE 201


>sp|AROC_HALMD|CHORISMATE synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 5 WEEML 9
WEEML
Sbjct: 171 WEEML 175


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 FWEEML 9
WEEML
Sbjct: 223 LWEEML 228


>sp|DMSB_HALSA|PUTATIVE dimethyl sulfoxide reductase iron-sulfur|Halobacterium salinarum

Query: 1 LGPFWEEMLS 10
+G FW +L+
Sbjct: 31 MGQFWNRVLT 40


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LGPFWEE 7
LGP W++
Sbjct: 73 LGPTWDD 79


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LGPFWEE 7
LGP W++
Sbjct: 73 LGPTWDD 79


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LGPFWEE 7
LGP W++
Sbjct: 73 LGPTWDD 79


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LGPFWEE 7
LGP W++
Sbjct: 73 LGPTWDD 79


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LGPFWEE 7
LGP W++
Sbjct: 73 LGPTWDD 79


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LGPFWEE 7
LGP W++
Sbjct: 73 LGPTWDD 79


>sp|Y103_SACS2|PROTEIN SSO0103|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LGPFWEE 7
LGP W++
Sbjct: 81 LGPTWDD 87


>sp|NADM_IGNH4|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PFWEEML 9
P WEEM+
Sbjct: 141 PKWEEMV 147


>sp|PHS_HALLT|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Halorubrum lacusprofundi

Query: 1 LGPFWE 6
LGP WE
Sbjct: 32 LGPVWE 37


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 5 WEEMLS 10
WE+MLS
Sbjct: 230 WEKMLS 235




359|SequenceR|1800|1791|IDIELLGPFW

>sp|AROD_METTP|3-DEHYDROQUINATE dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IDIELLGP 8
IDIEL+ P
Sbjct: 99 IDIELMAP 106


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IDIELLGP 8
+DIEL GP
Sbjct: 78 LDIELSGP 85


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IDIELLGPFW 10
+DI L PF+
Sbjct: 416 VDIYLFNPFY 425


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 IDIELLGPFW 10
+D+ ++G FW
Sbjct: 438 VDLVVVGAFW 447


>sp|PYRK_METKA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanopyrus kandleri

Query: 1 IDIELLGPF 9
+ IE++GPF
Sbjct: 64 LTIEIVGPF 72


>sp|RL15E_NANEQ|LARGE ribosomal subunit protein eL15|Nanoarchaeum equitans (strain

Query: 2 DIELLGPFW 10
++E+LG +W
Sbjct: 108 NMEVLGSYW 116


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IDIELLGP 8
+DIE LGP
Sbjct: 483 LDIEGLGP 490


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 5 LLGPFW 10
L+GP W
Sbjct: 247 LIGPIW 252


>sp|RFCS_METTH|REPLICATION factor C small subunit|Methanothermobacter thermautotrophicus

Query: 4 ELLGPFW 10
E+LG +W
Sbjct: 62 EILGEYW 68




360|SequenceR|1805|1796|EGEGCIDIEL

>sp|RS17_NITMS|SMALL ribosomal subunit protein uS17|Nitrosopumilus maritimus (strain

Query: 4 GCIDIE 9
GCID+E
Sbjct: 76 GCIDVE 81


>sp|RPO1C_METMP|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain DSM

Query: 2 GEGCIDI 8
G GCIDI
Sbjct: 368 GTGCIDI 374


>sp|RPO1C_METM5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C5 /

Query: 2 GEGCIDI 8
G GCIDI
Sbjct: 368 GTGCIDI 374


>sp|RPO1C_METM6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C6 /

Query: 2 GEGCIDI 8
G GCID+
Sbjct: 368 GTGCIDV 374


>sp|RPO1C_METM7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C7 /

Query: 2 GEGCIDI 8
G GCID+
Sbjct: 368 GTGCIDV 374


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 2 GEGCID 7
G+GC+D
Sbjct: 243 GDGCVD 248


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EGEGCIDIEL 10
+GEG DI+L
Sbjct: 139 QGEGSRDIKL 148


>sp|HMDH_ARCFU|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GEGCIDIE 9
G GC DIE
Sbjct: 169 GGGCKDIE 176


>sp|RPO1C_META3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus aeolicus (strain ATCC

Query: 2 GEGCIDI 8
G GC+D+
Sbjct: 370 GTGCVDV 376


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CIDIEL 10
C+DIEL
Sbjct: 72 CVDIEL 77




361|SequenceR|1810|1801|KKLLTEGEGC

>sp|EPPA_METMP|PREPILIN peptidase EppA|Methanococcus maripaludis (strain DSM 14266

Query: 1 KKLLTEGEG 9
K L+T+GEG
Sbjct: 284 KSLMTDGEG 292


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 LTEGEGC 10
LTEG GC
Sbjct: 309 LTEGTGC 315


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 LTEGEGC 10
LTEG GC
Sbjct: 309 LTEGTGC 315


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KLLTEGEG 9
KLL+ GEG
Sbjct: 301 KLLSAGEG 308


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 1 KKLLTEGE 8
KKL+ EGE
Sbjct: 194 KKLIPEGE 201


>sp|MTRH_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanopyrus kandleri (strain AV19 /

Query: 2 KLLTEGE 8
K+LTEGE
Sbjct: 168 KILTEGE 174


>sp|EPPA_METJA|PREPILIN peptidase EppA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLTEGEG 9
+LT+GEG
Sbjct: 283 ILTDGEG 289


>sp|RL10_META3|LARGE ribosomal subunit protein uL10|Methanococcus aeolicus (strain

Query: 1 KKLLTEGE 8
KKLL EG+
Sbjct: 21 KKLLKEGQ 28


>sp|NADK_SULTO|NAD kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KKLLTEGEG 9
+K+L EG+G
Sbjct: 131 RKILFEGDG 139


>sp|PURA_ARCFU|ADENYLOSUCCINATE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KKLLTEGEGC 10
KK+ T G GC
Sbjct: 119 KKIGTTGTGC 128


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KLLTEGEG 9
KLL +GEG
Sbjct: 305 KLLGDGEG 312




362|SequenceR|1815|1806|SYLAWKKLLT

>sp|PGK2_METKA|2-PHOSPHOGLYCERATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 SYLAWKKL 8
SY AWK+L
Sbjct: 167 SYTAWKRL 174


>sp|PGK2_PYRHO|2-PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SYLAWKKL 8
++LAWK+L
Sbjct: 145 TFLAWKEL 152


>sp|PGK2_PYRFU|2-PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SYLAWKKL 8
++LAWK+L
Sbjct: 145 TFLAWKEL 152


>sp|GUAAA_IGNH4|GMP synthase [glutamine-hydrolyzing] subunit A|Ignicoccus hospitalis

Query: 1 SYLAWKKLL 9
+YL WKK L
Sbjct: 67 AYLRWKKPL 75


>sp|PGK2_PYRAB|2-PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 SYLAWKKL 8
++LAWK++
Sbjct: 145 TFLAWKEI 152


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SYLAWKKL 8
S+L WK L
Sbjct: 295 SFLTWKNL 302


>sp|OTC_STAMF|ORNITHINE carbamoyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 YLAWKKL 8
YL WK+L
Sbjct: 78 YLGWKEL 84


>sp|TRM56_ARCFU|TRNA (cytidine(56)-2'-O)-methyltransferase|Archaeoglobus fulgidus

Query: 3 LAWKKLL 9
++WKKLL
Sbjct: 63 VSWKKLL 69


>sp|PGK2_METMP|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 YLAWKKLL 9
YL W+++L
Sbjct: 83 YLLWRRIL 90


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SYLAWKKLLT 10
++ A+KKLLT
Sbjct: 139 AHQAYKKLLT 148


>sp|PGK2_METVS|2-PHOSPHOGLYCERATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 YLAWKKLL 9
YL W+++L
Sbjct: 84 YLLWRRVL 91


>sp|PGK2_METM6|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 YLAWKKLL 9
YL W+++L
Sbjct: 84 YLLWRRVL 91


>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 YLAWKKLL 9
YL W+++L
Sbjct: 84 YLLWRRVL 91


>sp|PGK2_METM5|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 YLAWKKLL 9
YL W+++L
Sbjct: 84 YLLWRRVL 91


>sp|TBP_METM7|TATA-BOX-BINDING protein|Methanococcus maripaludis (strain C7 /

Query: 1 SYLAWKKLLT 10
+Y+A+ K+LT
Sbjct: 162 AYVAFNKILT 171


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SYLAWKK 7
+YL WKK
Sbjct: 654 NYLNWKK 660


>sp|PRIS_METPE|DNA primase small subunit PriS|Methanosphaerula palustris (strain ATCC

Query: 2 YLAWKKL 8
YLAW K+
Sbjct: 204 YLAWLKV 210


>sp|SECE_AERPE|PROTEIN translocase subunit SecE|Aeropyrum pernix (strain ATCC 700893

Query: 3 LAWKKLLT 10
+AW+++LT
Sbjct: 12 VAWRRILT 19




363|SequenceR|1820|1811|EGDNFSYLAW

>sp|PSB1_THEKO|PROTEASOME subunit beta 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GDNFSYLAW 10
G F+Y+AW
Sbjct: 97 GRGFAYMAW 105


>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DNFSYLAW 10
DN+ YL W
Sbjct: 345 DNYCYLYW 352


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EGDNFSYL 8
EGD F YL
Sbjct: 419 EGDGFKYL 426


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii

Query: 1 EGDNFSYLAW 10
+GD+ ++AW
Sbjct: 8 KGDSMKFIAW 17


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 DNFSYLAW 10
D F+YL W
Sbjct: 915 DVFNYLGW 922


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 2 GDNFSYLAW 10
GDN Y+ W
Sbjct: 106 GDNNYYVVW 114


>sp|PSB2_PYRHO|PROTEASOME subunit beta 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 FSYLAW 10
F YLAW
Sbjct: 103 FPYLAW 108


>sp|KAE1_METKA|TRNA N6-adenosine threonylcarbamoyltransferase|Methanopyrus kandleri

Query: 2 GDNFSYLAW 10
GDN + +AW
Sbjct: 290 GDNGAMIAW 298


>sp|KAE1_HYPBU|TRNA N6-adenosine threonylcarbamoyltransferase|Hyperthermus butylicus

Query: 2 GDNFSYLAW 10
GDN + +AW
Sbjct: 322 GDNGAMIAW 330


>sp|KAE1_CALMQ|TRNA N6-adenosine threonylcarbamoyltransferase|Caldivirga maquilingensis

Query: 2 GDNFSYLAW 10
GDN + +AW
Sbjct: 285 GDNGAMIAW 293


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GDNFSYLAW 10
GDN + +AW
Sbjct: 289 GDNGAMIAW 297


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GDNFSYLAW 10
GDN + +AW
Sbjct: 285 GDNGAMIAW 293


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GDNFSYLAW 10
GDN + +AW
Sbjct: 290 GDNGAMIAW 298


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GDNFSYLAW 10
GDN + +AW
Sbjct: 289 GDNGAMIAW 297


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GDNFSYLAW 10
GDN + +AW
Sbjct: 289 GDNGAMIAW 297


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GDNFSYLAW 10
GDN + +AW
Sbjct: 289 GDNGAMIAW 297


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GDNFSYLAW 10
GDN + +AW
Sbjct: 283 GDNGAMIAW 291


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 1 EGDNFSYL 8
EG+NFS L
Sbjct: 648 EGENFSRL 655


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGDNFSYL 8
EGDNF+ +
Sbjct: 248 EGDNFARM 255


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 3 DNFSYLAW 10
DN YL+W
Sbjct: 347 DNTCYLSW 354


>sp|RISC_AERPE|RIBOFLAVIN synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EGDNFSYLA 9
E D SYLA
Sbjct: 70 EADKLSYLA 78


>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GDNFSYLAW 10
G +SYL W
Sbjct: 311 GSPYSYLYW 319


>sp|FLUC1_METBF|FLUORIDE-SPECIFIC ion channel FluC 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 EGDNFSYL 8
EG NFS+
Sbjct: 86 EGQNFSFF 93


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GDNFSY 7
GDNF+Y
Sbjct: 835 GDNFAY 840


>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EGDNFSYL 8
+GD+ SYL
Sbjct: 141 DGDDLSYL 148


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EGDNFSYLAW 10
E D S +AW
Sbjct: 333 ESDRLSAIAW 342


>sp|Y731_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus (strain

Query: 1 EGDNFSY 7
EG+ FSY
Sbjct: 217 EGEEFSY 223


>sp|CAS1C_METRM|CRISPR-ASSOCIATED protein Cas1 3|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 EGDNFSY 7
EG+N SY
Sbjct: 300 EGENLSY 306


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 EGDNFSYL 8
+GD FSYL
Sbjct: 757 DGDIFSYL 764


>sp|COBS_THEVO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GDNFSYLAW 10
GD+ Y+ W
Sbjct: 41 GDSILYITW 49


>sp|SOR_PYRFU|SUPEROXIDE reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EGDNFSY 7
EG+NF Y
Sbjct: 59 EGENFVY 65


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain

Query: 1 EGDNFSYLA 9
+GD F Y A
Sbjct: 41 DGDEFGYAA 49


>sp|TDXH_STAMF|PEROXIREDOXIN marinus (strain ATCC 43588

Query: 4 NFSYLAW 10
NFS++ W
Sbjct: 77 NFSHIKW 83


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DNFSYLAW 10
+NFS + W
Sbjct: 125 ENFSRVTW 132




364|SequenceR|1825|1816|IKQHEEGDNF

>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EEGDNF 10
EEGDNF
Sbjct: 247 EEGDNF 252


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 IKQHEEGDNF 10
+ QHE GD
Sbjct: 403 VNQHETGDTL 412


>sp|DYR1_HALMA|DIHYDROFOLATE reductase 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 IKQHEEGDNF 10
I +H EGD +
Sbjct: 141 IHEHNEGDRY 150


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 IKQHEEGDNF 10
+KQ +GDNF
Sbjct: 297 VKQFVKGDNF 306


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IKQHEEGDN 9
++++EEG+N
Sbjct: 144 LRKYEEGEN 152


>sp|CDC6_METLZ|ORC1-TYPE DNA replication protein|Methanocorpusculum labreanum (strain ATCC

Query: 1 IKQHEEGD 8
+K HE+GD
Sbjct: 418 LKSHEKGD 425


>sp|DPCKG_THEVO|GTP-DEPENDENT dephospho-CoA kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IKQHEEG 7
I QHEEG
Sbjct: 74 IFQHEEG 80


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 EEGDNF 10
EEGDN+
Sbjct: 32 EEGDNY 37


>sp|MOAA_SACI6|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 EEGDNF 10
EEGDN+
Sbjct: 32 EEGDNY 37


>sp|MOAA_SACI4|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 EEGDNF 10
EEGDN+
Sbjct: 32 EEGDNY 37


>sp|MOAA_SACI3|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.27)

Query: 5 EEGDNF 10
EEGDN+
Sbjct: 32 EEGDNY 37


>sp|MOAA_SACI1|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 EEGDNF 10
EEGDN+
Sbjct: 32 EEGDNY 37


>sp|HISX_HALMA|HISTIDINOL dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 4 HEEGD 8
HEEGD
Sbjct: 39 HEEGD 43


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 HEEGDNF 10
HE G+NF
Sbjct: 225 HEYGENF 231


>sp|SYH_NATPD|HISTIDINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 HEEGDNF 10
HEE D F
Sbjct: 208 HEEADTF 214


>sp|MOAA_SACI7|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 EEGDNF 10
EEGDN+
Sbjct: 32 EEGDNY 37


>sp|MOAA_SACI2|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 EEGDNF 10
EEGDN+
Sbjct: 32 EEGDNY 37


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IKQHEEGD 8
IK+HE+G+
Sbjct: 474 IKRHEKGE 481




365|SequenceR|1830|1821|LDDLLIKQHE

>sp|CPGS_METST|CYCLIC 2,3-diphosphoglycerate synthetase|Methanosphaera stadtmanae (strain

Query: 1 LDDLLIKQHE 10
LDDLLIK HE
Sbjct: 316 LDDLLIKIHE 325


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 5 LIKQHE 10
LIKQHE
Sbjct: 421 LIKQHE 426


>sp|RPO10_HALWD|DNA-DIRECTED RNA polymerase subunit Rpo10|Haloquadratum walsbyi (strain DSM

Query: 1 LDDLLIKQH 9
LDDL IK+H
Sbjct: 36 LDDLGIKRH 44


>sp|CAS1A_METRM|CRISPR-ASSOCIATED protein Cas1 1|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 3 DLLIKQHE 10
DLLIKQ E
Sbjct: 86 DLLIKQAE 93


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 LDDLLIKQH 9
+DDLL ++H
Sbjct: 94 IDDLLDREH 102


>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDDLLIKQH 9
LDD+ IK H
Sbjct: 40 LDDMRIKSH 48


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 LDDLLIKQH 9
L D+LIK+H
Sbjct: 155 LFDVLIKKH 163


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 LDDLLIKQH 9
+DDLL+K +
Sbjct: 764 IDDLLVKYY 772


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 LDDLLIKQHE 10
+DDLL+K ++
Sbjct: 831 IDDLLVKYYK 840


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 LDDLLIKQHE 10
+DDLL+K ++
Sbjct: 826 VDDLLVKYYK 835


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 LDDLLIK 7
+DDLL+K
Sbjct: 795 IDDLLVK 801


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 LDDLLIKQH 9
+DDLL+K +
Sbjct: 827 VDDLLVKYY 835


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 LDDLLIK 7
+DDLL+K
Sbjct: 829 IDDLLVK 835




366|SequenceR|1835|1826|EAKKMLDDLL

>sp|RPO13_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo13|Sulfolobus acidocaldarius (strain

Query: 1 EAKKMLDDL 9
EAKKM DD+
Sbjct: 65 EAKKMFDDV 73


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EAKKMLD 7
EAKKMLD
Sbjct: 416 EAKKMLD 422


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 EAKKMLDDLL 10
EA+KM+ D+L
Sbjct: 410 EARKMVTDIL 419


>sp|PIMT_PYRAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 AKKMLDDL 9
AKK++DDL
Sbjct: 2 AKKLVDDL 9


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 EAKKMLDDL 9
E+K+ LDDL
Sbjct: 421 ESKRTLDDL 429


>sp|RL22_METMA|LARGE ribosomal subunit protein uL22|Methanosarcina mazei (strain ATCC

Query: 1 EAKKMLDDLL 10
EA+K L+D++
Sbjct: 44 EARKFLEDVI 53


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 1 EAKKMLDDLL 10
EAK++L DLL
Sbjct: 254 EAKRVLRDLL 263


>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 EAKKMLDDL 9
E +KM+DDL
Sbjct: 444 EVQKMVDDL 452


>sp|GGGPS_PYRFU|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EAKKMLDDL 9
EA+K L+DL
Sbjct: 237 EARKKLEDL 245


>sp|SPCS_METMP|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 AKKMLDDLL 10
+KK+LD+LL
Sbjct: 338 SKKLLDELL 346


>sp|RL22_METBF|LARGE ribosomal subunit protein uL22|Methanosarcina barkeri (strain

Query: 1 EAKKMLDDLL 10
EA+K L+D++
Sbjct: 44 EARKFLEDVI 53


>sp|RL22_METAC|LARGE ribosomal subunit protein uL22|Methanosarcina acetivorans (strain

Query: 1 EAKKMLDDLL 10
EA+K L+D++
Sbjct: 44 EARKFLEDVI 53


>sp|RPO10_NANEQ|DNA-DIRECTED RNA polymerase subunit Rpo10|Nanoarchaeum equitans (strain

Query: 1 EAKKMLDDL 9
+ KK+LDDL
Sbjct: 30 DPKKVLDDL 38


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EAKKMLDDLL 10
E+KKML ++L
Sbjct: 554 ESKKMLHEVL 563


>sp|KHSE_METJA|HOMOSERINE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AKKMLDDL 9
AKKM+DD
Sbjct: 64 AKKMIDDF 71


>sp|RL22_ARCFU|LARGE ribosomal subunit protein uL22|Archaeoglobus fulgidus (strain

Query: 1 EAKKMLDDLL 10
EA+K+L+D++
Sbjct: 47 EARKLLEDVV 56


>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 2 AKKMLDDLL 10
AKKM +DL+
Sbjct: 23 AKKMYEDLM 31


>sp|RL22_STAMF|LARGE ribosomal subunit protein uL22|Staphylothermus marinus (strain

Query: 1 EAKKMLDDLL 10
EAKK+L++++
Sbjct: 45 EAKKLLENVI 54


>sp|RPO10_METB6|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanoregula boonei (strain DSM

Query: 1 EAKKMLDDL 9
+ KK+LDDL
Sbjct: 29 DPKKILDDL 37


>sp|RAD50_THEVO|DNA double-strand break repair Rad50|Thermoplasma volcanium (strain

Query: 1 EAKKMLDDLL 10
E KK+LD++L
Sbjct: 150 ERKKILDEIL 159


>sp|PFDB_THEKO|PREFOLDIN subunit beta|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EAKKMLDDL 9
EAKK LD++
Sbjct: 38 EAKKALDEI 46


>sp|PFDA_SULAC|PREFOLDIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 AKKMLDD 8
AKK+LDD
Sbjct: 101 AKKILDD 107


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 EAKKMLD 7
EAKKM+D
Sbjct: 129 EAKKMID 135


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 3 KKMLDDLL 10
++M+DDLL
Sbjct: 157 QRMIDDLL 164


>sp|Y540_METJA|UNCHARACTERIZED protein MJ0540|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EAKKMLDDLL 10
E +K+LDDLL
Sbjct: 60 EIEKILDDLL 69


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 1 EAKKMLDDL 9
E KK++D+L
Sbjct: 231 EPKKLIDEL 239


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 1 EAKKMLDDL 9
E KK++D+L
Sbjct: 231 EPKKLIDEL 239


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 EAKKMLDDLL 10
EAK++LD +L
Sbjct: 483 EAKEILDSVL 492




367|SequenceR|1840|1831|LLDGEEAKKM

>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain DSM

Query: 1 LLDGEEAKKM 10
L+D EE KKM
Sbjct: 291 LVDSEEVKKM 300


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 1 LLDGEEAKKM 10
L+D EE KKM
Sbjct: 291 LVDSEEVKKM 300


>sp|TRUB_PYRIL|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum islandicum (strain DSM

Query: 1 LLDGEEAKKM 10
L++ EEAKKM
Sbjct: 291 LVESEEAKKM 300


>sp|TRUB_PYRNV|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum neutrophilum (strain DSM

Query: 1 LLDGEEAKKM 10
L+D EE KKM
Sbjct: 291 LVDSEEVKKM 300


>sp|RPO4_METJA|DNA-DIRECTED RNA polymerase subunit Rpo4|Methanocaldococcus jannaschii (strain

Query: 2 LDGEEAKKM 10
LD EEAKK+
Sbjct: 55 LDKEEAKKL 63


>sp|Y293_THEAC|PUTATIVE esterase Ta0293|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LLDGEEAKKM 10
+ DGE+ KK+
Sbjct: 1 MFDGEDLKKI 10


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 2 LDGEEAKKM 10
LDGE+AK++
Sbjct: 940 LDGEKAKRI 948


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 1 LLDGEEAKKM 10
++D EEAKK+
Sbjct: 19 VVDQEEAKKL 28


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 LLDGEEAKKM 10
LLDGE+A+ +
Sbjct: 455 LLDGEDAEDL 464


>sp|NTPPA_PYRFU|DTTP/UTP pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DGEEAKKM 10
D EEA+KM
Sbjct: 83 DSEEARKM 90


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DGEEAKKM 10
DGEEAK +
Sbjct: 61 DGEEAKDI 68


>sp|ARLY_METLZ|ARGININOSUCCINATE lyase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LLDGEEAKKM 10
L+DG AKK+
Sbjct: 52 LIDGASAKKL 61


>sp|RS4E_IGNH4|SMALL ribosomal subunit protein eS4|Ignicoccus hospitalis (strain KIN4/I

Query: 2 LDGEEAKK 9
+D EEAKK
Sbjct: 116 IDAEEAKK 123


>sp|CBIM1_METLZ|PUTATIVE cobalt transport protein CbiM|Methanocorpusculum labreanum (strain

Query: 1 LLDGEEAKKM 10
++ GEE KK+
Sbjct: 217 VISGEEVKKV 226


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii (strain

Query: 2 LDGEEAKKM 10
+DG+EAK++
Sbjct: 499 MDGKEAKEL 507


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 1 LLDGEEAK 8
L+DG+E+K
Sbjct: 201 LIDGDESK 208


>sp|Y412_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 LLDGEEAK 8
LLDG+E K
Sbjct: 78 LLDGKEVK 85




368|SequenceR|1845|1836|QDPNVLLDGE

>sp|NNRD_HALTV|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Haloterrigena turkmenica (strain

Query: 1 QDPNVLLD 8
QDPN+L+D
Sbjct: 64 QDPNLLVD 71


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PNVLLDGE 10
P V+LDGE
Sbjct: 291 PGVILDGE 298


>sp|Y640_PYRHO|PUTATIVE phosphate permease PH0640|Pyrococcus horikoshii (strain ATCC

Query: 2 DPNVLLDG 9
DPNVL+ G
Sbjct: 80 DPNVLIYG 87


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DPNVLLDG 9
DP+VLL G
Sbjct: 146 DPDVLLKG 153


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DPNVLLDG 9
DPNVL+ G
Sbjct: 85 DPNVLIFG 92


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 QDPNVLLDG 9
+DP+VLL G
Sbjct: 296 RDPDVLLKG 304


>sp|Y1401_PYRAB|PUTATIVE phosphate permease PYRAB14010|Pyrococcus abyssi (strain GE5 /

Query: 2 DPNVLLDG 9
DPNVL+ G
Sbjct: 79 DPNVLVYG 86


>sp|PHNC_HALSA|PHOSPHONATES import ATP-binding protein PhnC|Halobacterium salinarum (strain

Query: 1 QDPNVLLDGE 10
QDPN+LL E
Sbjct: 155 QDPNLLLADE 164


>sp|PRIS_METB6|DNA primase small subunit PriS|Methanoregula boonei (strain DSM 21154

Query: 2 DPNVLLDG 9
DP VLL+G
Sbjct: 179 DPAVLLNG 186


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 3 PNVLLDG 9
PNVL DG
Sbjct: 245 PNVLADG 251


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 1 QDPNVLLD 8
+D NVLLD
Sbjct: 203 RDSNVLLD 210


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QDPNVLLDGE 10
+DPNV+ GE
Sbjct: 61 KDPNVVQIGE 70


>sp|LYSZ_IGNH4|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Ignicoccus hospitalis

Query: 3 PNVLLDGE 10
P VL+DG+
Sbjct: 195 PGVLMDGK 202


>sp|RL10_HALVD|LARGE ribosomal subunit protein uL10|Haloferax volcanii (strain ATCC

Query: 1 QDPNVLLDGE 10
+D NVL +GE
Sbjct: 160 EDSNVLSEGE 169


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 DPNVLLDG 9
DP V+LDG
Sbjct: 301 DPVVVLDG 308


>sp|EF1A_METVA|ELONGATION factor 1-alpha|Methanococcus vannielii

Query: 1 QDPNVLLDG 9
Q P+VL DG
Sbjct: 330 QHPSVLTDG 338


>sp|KAD6_PYRAB|PUTATIVE adenylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 QDPNVLLDG 9
+D NV+LDG
Sbjct: 64 KDRNVVLDG 72


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 2 DPNVLLDGE 10
D VLLDG+
Sbjct: 464 DTTVLLDGK 472


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 2 DPNVLLDGE 10
DP ++++GE
Sbjct: 25 DPEIIVNGE 33




369|SequenceR|1850|1841|ITLRPQDPNV

>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 1 ITLRPQDPNV 10
I L+P+DP +
Sbjct: 164 IYLKPEDPEL 173


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 1 ITLRPQDPNV 10
I L+P+DP +
Sbjct: 164 IYLKPEDPEL 173


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 3 LRPQDPNV 10
++P DPNV
Sbjct: 119 IQPADPNV 126


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 ITLRPQDPNV 10
+ +RP +PNV
Sbjct: 766 LAVRPYNPNV 775


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ITLRPQDPN 9
I+LRP PN
Sbjct: 301 ISLRPGGPN 309


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ITLRPQDPN 9
I+LRP PN
Sbjct: 301 ISLRPGGPN 309


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ITLRPQDPN 9
I+LRP PN
Sbjct: 301 ISLRPGGPN 309


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ITLRPQDPN 9
I+LRP PN
Sbjct: 301 ISLRPGGPN 309


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 3 LRPQDPNV 10
++P DPN+
Sbjct: 119 IQPADPNI 126


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PQDPN 9
PQDPN
Sbjct: 85 PQDPN 89


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 ITLRPQDP 8
+T+RPQ P
Sbjct: 379 VTVRPQKP 386


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 2 TLRPQDPNV 10
T+R QDP V
Sbjct: 160 TIRRQDPKV 168


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ITLRPQDP 8
+T+RPQ P
Sbjct: 379 VTVRPQKP 386


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 ITLRPQDP 8
+T+RPQ P
Sbjct: 379 VTVRPQKP 386


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 1 ITLRPQDP 8
+T+RPQ P
Sbjct: 379 VTVRPQKP 386


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ITLRPQDP 8
+T+RPQ P
Sbjct: 380 VTVRPQKP 387


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 TLRPQDPNV 10
++RPQ P V
Sbjct: 137 SIRPQPPKV 145


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 RPQDPNV 10
RP DP+V
Sbjct: 332 RPSDPDV 338


>sp|IF2P_STAMF|PROBABLE translation initiation factor IF-2|Staphylothermus marinus (strain

Query: 2 TLRPQDPNV 10
T+R QDP +
Sbjct: 158 TIRKQDPRI 166




370|SequenceR|1855|1846|IQSIPITLRP

>sp|RN393_SACS2|CRISPR system ring nuclease SSO1393|Saccharolobus solfataricus (strain

Query: 1 IQSIPITLRP 10
+ S PIT+RP
Sbjct: 199 LPSPPITIRP 208


>sp|TRPD_METHJ|ANTHRANILATE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 4 IPITLRP 10
IPITL P
Sbjct: 130 IPITLTP 136


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 QSIPITLR 9
+S+P+TLR
Sbjct: 179 ESLPLTLR 186


>sp|COXX_KORCO|PROTOHEME IX farnesyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 IQSIPITLR 9
+ S+PITLR
Sbjct: 239 VLSLPITLR 247


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IQSIPITL 8
I+S+P+TL
Sbjct: 178 IRSVPLTL 185


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 5 PITLRP 10
PIT+RP
Sbjct: 216 PITIRP 221




371|SequenceR|1860|1851|ILDPAIQSIP

>sp|HEM1_METBU|GLUTAMYL-TRNA reductase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LDPAIQSIP 10
+DPA++ IP
Sbjct: 275 IDPAVEEIP 283


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 1 ILDPAIQSIP 10
I+DP I++IP
Sbjct: 20 IIDPYIETIP 29


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILDPAIQSI 9
ILDP +QS+
Sbjct: 637 ILDPGLQSL 645


>sp|PYRB_METLZ|ASPARTATE carbamoyltransferase catalytic subunit|Methanocorpusculum labreanum

Query: 2 LDPAIQSIP 10
+DPA+ S+P
Sbjct: 271 IDPAVDSLP 279


>sp|RL21_META3|LARGE ribosomal subunit protein eL21|Methanococcus aeolicus (strain

Query: 1 ILDPAIQ 7
ILDP++Q
Sbjct: 43 ILDPSVQ 49


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 ILDPAIQS 8
ILDPA+ S
Sbjct: 511 ILDPAVGS 518


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILDPAIQS 8
+LDPAI+S
Sbjct: 269 MLDPAIRS 276




372|SequenceR|1865|1856|PLDALILDPA

>sp|G3P_METB6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoregula boonei (strain DSM 21154

Query: 1 PLDALILDP 9
P+DA++LDP
Sbjct: 179 PIDAVVLDP 187


>sp|G3P_METMJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PLDALILDPA 10
P+DA++L+PA
Sbjct: 179 PIDAIVLNPA 188


>sp|G3P_METHJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PLDALILDP 9
P+DA++LDP
Sbjct: 179 PIDAVVLDP 187


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 3 DALILDP 9
DALILDP
Sbjct: 334 DALILDP 340


>sp|G3P2_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLDALILDP 9
P+DA++L+P
Sbjct: 180 PVDAIVLNP 188


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 2 LDALILDP 9
+DALILDP
Sbjct: 326 IDALILDP 333


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 1 PLDALILD 8
PLD ++LD
Sbjct: 250 PLDVIVLD 257


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 ALILDPA 10
AL+LDPA
Sbjct: 238 ALVLDPA 244


>sp|G3P_AERPE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PLDALILDP 9
P+D+++L+P
Sbjct: 181 PIDSIVLNP 189


>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 DALILDP 9
DALIL+P
Sbjct: 10 DALILNP 16


>sp|ACDD_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit delta|Archaeoglobus fulgidus

Query: 1 PLDALILDPA 10
P D++++DP
Sbjct: 321 PRDSIVMDPT 330


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 LDALILD 8
LDALILD
Sbjct: 312 LDALILD 318


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 LDALILD 8
LDALILD
Sbjct: 312 LDALILD 318


>sp|ACDD2_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 PLDALILDP 9
P D +I+DP
Sbjct: 305 PRDRIIMDP 313


>sp|ACDD1_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 PLDALILDP 9
P D +I+DP
Sbjct: 305 PRDRIIMDP 313


>sp|ACDD_METMA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina mazei

Query: 1 PLDALILDP 9
P D +I+DP
Sbjct: 305 PRDRIIMDP 313


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 PLDALILDP 9
P D +I+DP
Sbjct: 306 PRDRIIMDP 314


>sp|ACDD1_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 PLDALILDP 9
P D +I+DP
Sbjct: 305 PRDRIIMDP 313




373|SequenceR|1870|1861|LMINRPLDAL

>sp|RS13_METLZ|SMALL ribosomal subunit protein uS13|Methanocorpusculum labreanum

Query: 2 MINRPLD 8
M+NRP+D
Sbjct: 80 MVNRPVD 86


>sp|RUXX_METTH|PUTATIVE snRNP Sm-like protein|Methanothermobacter thermautotrophicus

Query: 3 INRPLDAL 10
+ RPLDAL
Sbjct: 11 VQRPLDAL 18


>sp|HIS1_HALMA|ATP phosphoribosyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LMINRPLDAL 10
LM+N P DAL
Sbjct: 213 LMMNAPEDAL 222


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MINRPLDA 9
++NRP+D+
Sbjct: 224 LVNRPIDS 231


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 INRPLDAL 10
IN P+DAL
Sbjct: 344 INPPIDAL 351




374|SequenceR|1875|1866|LEDNNLMINR

>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LEDNNLMINR 10
LED N+++N+
Sbjct: 334 LEDANIIVNK 343


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LEDNNLMINR 10
LED N+++N+
Sbjct: 334 LEDANIIVNK 343


>sp|ASPD_METM7|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 LEDNNLMINR 10
+ D NLM+NR
Sbjct: 208 IADPNLMVNR 217


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 LEDNNLMINR 10
LED N+++N+
Sbjct: 334 LEDANIIVNK 343


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 LEDNNLMINR 10
LED N+++N+
Sbjct: 334 LEDANIIVNK 343


>sp|RS3A_THEVO|SMALL ribosomal subunit protein eS1|Thermoplasma volcanium (strain ATCC

Query: 2 EDNNLMINR 10
ED+N M+NR
Sbjct: 39 EDSNSMVNR 47


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 LEDNNLMINR 10
LED N+++N+
Sbjct: 334 LEDANIIVNK 343


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 LEDNNLMINR 10
LED N+++N+
Sbjct: 334 LEDANIIVNK 343


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 LEDNNLMINR 10
LED N+++N+
Sbjct: 334 LEDANIIVNK 343


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LEDNNLMINR 10
LE+ N+++NR
Sbjct: 343 LEEANIIVNR 352


>sp|PYRD_HALSA|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 700922

Query: 1 LEDNNLMINR 10
L D+N ++NR
Sbjct: 106 LPDDNALVNR 115


>sp|PYRD_HALS3|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 29341

Query: 1 LEDNNLMINR 10
L D+N ++NR
Sbjct: 106 LPDDNALVNR 115


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LEDNNLMINR 10
LE++N+++N+
Sbjct: 340 LEESNIIVNK 349


>sp|Y1471_METJA|UNCHARACTERIZED protein MJ1471|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DNNLMINR 10
DNNL+IN+
Sbjct: 91 DNNLLINK 98


>sp|AROE_METBF|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 1 LEDNNLMIN 9
L+D N++IN
Sbjct: 185 LQDANILIN 193


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LEDNNLMINR 10
+E+N ++INR
Sbjct: 345 IENNTIVINR 354


>sp|ASPD_METVS|L-ASPARTATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LEDNNLMINR 10
+ D NL++NR
Sbjct: 208 IADPNLIVNR 217


>sp|RLME_METM7|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 EDNNLMINR 10
ED+ LMI R
Sbjct: 241 EDSGLMIKR 249


>sp|RLME_METM6|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 EDNNLMINR 10
ED+ LMI R
Sbjct: 241 EDSGLMIKR 249


>sp|RLME_METMP|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 EDNNLMINR 10
ED+ LMI R
Sbjct: 241 EDSGLMIKR 249




375|SequenceR|1880|1871|AQEFELEDNN

>sp|Y522_METJA|UNCHARACTERIZED protein MJ0522|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AQEFELED 8
AQ+F++ED
Sbjct: 51 AQKFKIED 58


>sp|GGR1_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 ELEDNN 10
E+EDNN
Sbjct: 193 EMEDNN 198


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 FELEDNN 10
FEL DNN
Sbjct: 71 FELGDNN 77


>sp|Y076_METJA|UNCHARACTERIZED protein MJ0076|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AQEFELEDN 9
AQ+F +E+N
Sbjct: 94 AQQFRIEEN 102




376|SequenceR|1885|1876|LLFEPAQEFE

>sp|OTCC_THEAC|ORNITHINE carbamoyltransferase, catabolic|Thermoplasma acidophilum (strain

Query: 3 FEPAQEF 9
FEP QEF
Sbjct: 183 FEPKQEF 189


>sp|LEUD_PYRHO|3-ISOPROPYLMALATE dehydratase small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LLFEPAQEF 9
L+FEP ++F
Sbjct: 132 LMFEPLEDF 140


>sp|CBPX2_SACS2|THERMOSTABLE carboxypeptidase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLFEPAQE 8
L+F+PA+E
Sbjct: 135 LIFQPAEE 142


>sp|CBPX1_SACS2|THERMOSTABLE carboxypeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLFEPAQE 8
L+F+PA+E
Sbjct: 135 LIFQPAEE 142


>sp|PDXT_METMJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoculleus marisnigri

Query: 2 LFEPAQEFE 10
L+EP EFE
Sbjct: 67 LYEPVAEFE 75


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 3 FEPAQEF 9
FEP +EF
Sbjct: 316 FEPTKEF 322


>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LLFEPAQE 8
++F+P+QE
Sbjct: 144 IIFDPSQE 151




377|SequenceR|1890|1881|FSGDGLLFEP

>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 2 SGDGLLFEP 10
+ DGL FEP
Sbjct: 616 TSDGLFFEP 624


>sp|PSB2_PYRHO|PROTEASOME subunit beta 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FSGDGLL 7
FSGDG+L
Sbjct: 178 FSGDGIL 184


>sp|Y1615_METJA|CHEF taxis protein family member|Methanocaldococcus jannaschii (strain

Query: 1 FSGDGLLFEP 10
FSG G+L P
Sbjct: 11 FSGKGILITP 20


>sp|PSB2_PYRFU|PROTEASOME subunit beta 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FSGDGLL 7
F+GDGLL
Sbjct: 178 FTGDGLL 184


>sp|RL10_HALMA|LARGE ribosomal subunit protein uL10|Haloarcula marismortui (strain ATCC

Query: 3 GDGLLFEP 10
DG+LFEP
Sbjct: 198 ADGVLFEP 205


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 FSGDGLLFEP 10
+SG+G FEP
Sbjct: 640 YSGEGKRFEP 649


>sp|KADA_SULTO|ADENYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GDGLLF 8
GDGLLF
Sbjct: 84 GDGLLF 89


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 SGDGLLFEP 10
SGDG+ F P
Sbjct: 157 SGDGIKFVP 165


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GDGLLFEP 10
GD ++FEP
Sbjct: 256 GDKVIFEP 263


>sp|PSB2_PYRAB|PROTEASOME subunit beta 2|Pyrococcus abyssi (strain GE5 /

Query: 1 FSGDGLL 7
FSGDG++
Sbjct: 178 FSGDGIM 184


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 1 FSGDGLLFEP 10
+SG+G FEP
Sbjct: 636 YSGEGRKFEP 645


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FSGDGLLFEP 10
+SG+G FEP
Sbjct: 636 YSGEGRKFEP 645


>sp|MTD_METB6|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoregula boonei

Query: 2 SGDGLLFEP 10
+GDG+L +P
Sbjct: 253 AGDGILRQP 261


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GDGLLFEP 10
GD ++FEP
Sbjct: 258 GDKVVFEP 265


>sp|EF1A_METM6|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C6 /

Query: 3 GDGLLFEP 10
GD ++FEP
Sbjct: 258 GDKVIFEP 265


>sp|EF1A_METM7|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C7 /

Query: 3 GDGLLFEP 10
GD ++FEP
Sbjct: 258 GDKVIFEP 265


>sp|EF1A_METM5|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C5 /

Query: 3 GDGLLFEP 10
GD ++FEP
Sbjct: 258 GDKVIFEP 265


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GDGLLFEP 10
GD ++FEP
Sbjct: 258 GDKVVFEP 265


>sp|PSB1_CENSY|PROTEASOME subunit beta 1|Cenarchaeum symbiosum (strain A)

Query: 1 FSGDGL 6
FSGDGL
Sbjct: 171 FSGDGL 176


>sp|Y1715_METAC|UPF0280 protein MA_1715|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 GLLFEP 10
GL+FEP
Sbjct: 148 GLIFEP 153


>sp|Y220_METTP|UPF0179 protein Mthe_0220|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FSGDGLLFEP 10
F+G +++EP
Sbjct: 89 FAGSKIIYEP 98


>sp|EF1A_METVS|ELONGATION factor 1-alpha|Methanococcus vannielii (strain ATCC 35089

Query: 3 GDGLLFEP 10
GD ++FEP
Sbjct: 258 GDKVVFEP 265


>sp|EF1A_METVA|ELONGATION factor 1-alpha|Methanococcus vannielii

Query: 3 GDGLLFEP 10
GD ++FEP
Sbjct: 258 GDKVVFEP 265


>sp|COBQ_THEON|PROBABLE cobyric acid synthase|Thermococcus onnurineus (strain NA1)

Query: 1 FSGDGLLFEP 10
F GD L EP
Sbjct: 199 FRGDASLLEP 208


>sp|EF1A_METMP|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain DSM 14266

Query: 3 GDGLLFEP 10
GD ++FEP
Sbjct: 258 GDKVVFEP 265


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSGDGLLFEP 10
F G G L+EP
Sbjct: 657 FEGGGRLYEP 666


>sp|RL10_HALVD|LARGE ribosomal subunit protein uL10|Haloferax volcanii (strain ATCC

Query: 4 DGLLFEP 10
+G+LFEP
Sbjct: 199 EGVLFEP 205


>sp|NADK_METPE|NAD kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FSGDGLLF 8
F GDGLL
Sbjct: 158 FRGDGLLI 165


>sp|LEUC_THEKO|3-ISOPROPYLMALATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 FSGDGLLFE 9
+SGDG + E
Sbjct: 214 YSGDGYVLE 222


>sp|RL10_NATPD|LARGE ribosomal subunit protein uL10|Natronomonas pharaonis (strain ATCC

Query: 2 SGDGLLFEP 10
S +G+LF P
Sbjct: 196 SSEGVLFSP 204




378|SequenceR|1895|1886|RYVSGFSGDG

>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 RYVSGFSG 8
RYV+ FSG
Sbjct: 630 RYVATFSG 637


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 RYVSGFSG 8
RYV+ FSG
Sbjct: 630 RYVATFSG 637


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 RYVSGFSG 8
RYV+ FSG
Sbjct: 630 RYVATFSG 637


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 RYVSGFSG 8
RYV+ FSG
Sbjct: 630 RYVATFSG 637


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 RYVSGFSG 8
RYV+ FSG
Sbjct: 630 RYVATFSG 637


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 RYVSGFSG 8
RYV+ FSG
Sbjct: 630 RYVATFSG 637


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 RYVSGFSG 8
RYV+ FSG
Sbjct: 630 RYVATFSG 637


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YVSGFSG 8
Y+SGF G
Sbjct: 157 YISGFGG 163


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YVSGFSG 8
Y+SGF G
Sbjct: 157 YISGFGG 163


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YVSGFSG 8
Y+SGF G
Sbjct: 157 YISGFGG 163


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YVSGFSG 8
Y+SGF G
Sbjct: 157 YISGFGG 163


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 YVSGFSG 8
Y+SGF G
Sbjct: 157 YISGFGG 163


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YVSGFSG 8
Y+SGF G
Sbjct: 157 YISGFGG 163


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YVSGFSG 8
Y+SGF G
Sbjct: 157 YISGFGG 163


>sp|PGMI_PYRAE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum aerophilum

Query: 2 YVSGFSGDG 10
Y+SG G G
Sbjct: 41 YISGMGGSG 49


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RYVSGFSGDG 10
+YV+ GDG
Sbjct: 575 KYVTAMVGDG 584


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 1 RYVSGFSGDG 10
++V GF+ DG
Sbjct: 224 KFVFGFNDDG 233


>sp|CFBA_METMA|SIROHYDROCHLORIN cobaltochelatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VSGFSGDG 10
+ GFSG G
Sbjct: 55 IEGFSGTG 62


>sp|CSG_HALVD|CELL surface glycoprotein|Haloferax volcanii (strain ATCC 29605

Query: 3 VSGFSGDG 10
+SG SGDG
Sbjct: 449 LSGLSGDG 456


>sp|RIBL_METP4|FAD synthase|Methanolacinia petrolearia (strain DSM 11571

Query: 3 VSGFSGDG 10
+ G+SG+G
Sbjct: 116 IEGYSGEG 123


>sp|CFBA_METBF|SIROHYDROCHLORIN cobaltochelatase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VSGFSGDG 10
+ GFSG G
Sbjct: 55 IEGFSGTG 62




379|SequenceR|1900|1891|GEYAARYVSG

>sp|UPPP_METST|UNDECAPRENYL-DIPHOSPHATASE stadtmanae (strain ATCC 43021

Query: 2 EYAARY 7
EYAARY
Sbjct: 193 EYAARY 198


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 4 AARYVSG 10
AA+YVSG
Sbjct: 203 AAKYVSG 209


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 2 EYAARYVSG 10
EY +RY SG
Sbjct: 177 EYISRYPSG 185


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GEYAARYV 8
G+YA +YV
Sbjct: 359 GKYAGKYV 366


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GEYAARYVSG 10
G+Y AR+V G
Sbjct: 155 GKYIARFVVG 164


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GEYAARYVSG 10
G+Y AR+V G
Sbjct: 155 GKYIARFVVG 164


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GEYAARYVSG 10
G A RYV+G
Sbjct: 510 GSIAQRYVTG 519


>sp|BAX1_ARCFU|ENDONUCLEASE Bax1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EYAARYVS 9
EY ARY S
Sbjct: 113 EYVARYFS 120


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 GEYAARYVSG 10
EY ++YV G
Sbjct: 294 AEYISKYVKG 303


>sp|Y013_METJA|UNCHARACTERIZED protein MJ0013|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EYAARYVSG 10
E+A+ YV G
Sbjct: 95 EFASHYVDG 103


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 EYAARYVSG 10
EY ++YV G
Sbjct: 294 EYISKYVEG 302


>sp|GCS2_HALWD|GLUTAMATE--CYSTEINE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EYAARYVSG 10
++AARY G
Sbjct: 266 DFAARYADG 274




380|SequenceR|1905|1896|VAVEEGEYAA

>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 1 VAVEEGEYA 9
VAVEEGE++
Sbjct: 169 VAVEEGEFS 177


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 AVEEGEYA 9
++EEGEYA
Sbjct: 1264 SIEEGEYA 1271


>sp|SURE_HYPBU|5'-NUCLEOTIDASE SurE|Hyperthermus butylicus (strain DSM 5456

Query: 1 VAVEEGEYAA 10
V V+EGE+AA
Sbjct: 246 VNVKEGEWAA 255


>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 VAVEEGEYA 9
V V+EGEYA
Sbjct: 2 VVVKEGEYA 10


>sp|CP119_SULAC|CYTOCHROME P450 119|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VEEGEY 8
+EEGEY
Sbjct: 272 IEEGEY 277


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VAVEEGEY 8
+A++EGEY
Sbjct: 481 LAIKEGEY 488


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AVEEGEYAA 10
AV+EG YAA
Sbjct: 56 AVKEGVYAA 64


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 3 VEEGEYAA 10
+EE EYAA
Sbjct: 385 LEENEYAA 392


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AVEEGEYAA 10
A+E GEY+
Sbjct: 352 AIESGEYSG 360


>sp|Y1504_ARCFU|UNCHARACTERIZED protein AF_1504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VAVEEGEYAA 10
+ V+EGEY +
Sbjct: 149 IGVKEGEYVS 158


>sp|GLMS_PYRAE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrobaculum aerophilum (strain ATCC

Query: 1 VAVEEGEY 8
+AV +GEY
Sbjct: 209 IAVRDGEY 216


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 1 VAVEEGEYAA 10
VA EEG Y A
Sbjct: 80 VAKEEGLYGA 89




381|SequenceR|1910|1901|KNFIKVAVEE

>sp|RL10_METST|LARGE ribosomal subunit protein uL10|Methanosphaera stadtmanae (strain

Query: 1 KNFIKVAVE 9
KNFIK+A+E
Sbjct: 56 KNFIKIALE 64


>sp|Y1004_METJA|UNCHARACTERIZED protein MJ1004|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNFIKVAVEE 10
KNF K+ V+E
Sbjct: 9 KNFAKIYVDE 18




382|SequenceR|1915|1906|RLSTHKNFIK

>sp|RS5_SULAC|SMALL ribosomal subunit protein uS5|Sulfolobus acidocaldarius (strain

Query: 4 THKNFIK 10
TH+NFIK
Sbjct: 186 THENFIK 192


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LSTHKNF 8
L THKNF
Sbjct: 397 LFTHKNF 403


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LSTHKNF 8
+STHK F
Sbjct: 232 MSTHKTF 238


>sp|ARFB_METST|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanosphaera stadtmanae (strain ATCC

Query: 2 LSTHKNFIK 10
L H+NFIK
Sbjct: 168 LKEHENFIK 176




383|SequenceR|1920|1911|EQRLLRLSTH

>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 2 QRLLRLSTH 10
QR+LR++TH
Sbjct: 544 QRVLRIATH 552


>sp|MDH_METMP|MALATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EQRLLRLSTH 10
E+RLL LST+
Sbjct: 247 EKRLLTLSTY 256




384|SequenceR|1925|1916|CLVVLEQRLL

>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LVVLEQRLL 10
+++LE+RLL
Sbjct: 179 VIILEERLL 187




385|SequenceR|1930|1921|PHHLHCLVVL

>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HHLHCLVVL 10
H+LH LV+L
Sbjct: 245 HNLHVLVIL 253


>sp|RTCA_PYRHO|RNA 3'-terminal phosphate cyclase|Pyrococcus horikoshii (strain ATCC

Query: 1 PHHLHCLVVL 10
P HLH ++ L
Sbjct: 46 PQHLHAILAL 55


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 1 PHHLHCLV 8
P HL C+V
Sbjct: 537 PEHLRCVV 544


>sp|DPHB_METTH|DIPHTHINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 LHCLVV 9
LHCLVV
Sbjct: 231 LHCLVV 236


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 1 PHHLHC 6
P H+HC
Sbjct: 194 PMHVHC 199


>sp|CDC6A_HALMA|ORC1-TYPE DNA replication protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 5 HCLVVL 10
HCL+VL
Sbjct: 143 HCLIVL 148


>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 HHLHCL 7
HH HC+
Sbjct: 158 HHEHCI 163


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 2 HHLHCLVVL 10
H +H LV+L
Sbjct: 244 HDMHVLVIL 252


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 2 HHLHCLVVL 10
H +H LV+L
Sbjct: 238 HDMHVLVIL 246


>sp|CAS1A_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PHHLHCLVVL 10
P LH +VVL
Sbjct: 88 PTELHSIVVL 97


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HHLHCLVVL 10
H +H LV+L
Sbjct: 238 HGMHVLVIL 246


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 2 HHLHCLVVL 10
H +H LV+L
Sbjct: 238 HGMHVLVIL 246


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 2 HHLHCLVVL 10
H +H LV+L
Sbjct: 238 HGMHVLVIL 246


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 2 HHLHCLVVL 10
H +H LV+L
Sbjct: 238 HGMHVLVIL 246




386|SequenceR|1935|1926|LSILSPHHLH

>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 ILSPHHLH 10
+LS HHLH
Sbjct: 258 VLSNHHLH 265


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 ILSPHHLH 10
+LS HHLH
Sbjct: 260 VLSNHHLH 267


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 ILSPHHLH 10
+LS HHLH
Sbjct: 258 VLSNHHLH 265


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 3 ILSPHHLH 10
+LS HHLH
Sbjct: 258 VLSNHHLH 265


>sp|Y224_METTH|UPF0058 protein MTH_224|Methanothermobacter thermautotrophicus (strain

Query: 4 LSPHHLH 10
+SPHH+H
Sbjct: 38 ISPHHIH 44


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 3 ILSPHHL 9
+L PHHL
Sbjct: 504 LLIPHHL 510


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LSILSPHHLH 10
LS+ +P LH
Sbjct: 284 LSVYTPRRLH 293


>sp|RIFK_METS5|RIBOFLAVIN kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LSILSPHHL 9
+ ++SP+HL
Sbjct: 191 IEVISPYHL 199


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 ILSPHHLH 10
+LS HHL+
Sbjct: 255 VLSNHHLN 262


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 3 ILSPHHLH 10
+LS HHL+
Sbjct: 255 VLSNHHLN 262


>sp|RIFK_METBU|RIBOFLAVIN kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LSILSPHHL 9
L I+SP HL
Sbjct: 192 LEIISPVHL 200


>sp|Y1132_METJA|UPF0058 protein MJ1132|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LSPHHLH 10
+ PHH+H
Sbjct: 44 IRPHHIH 50




387|SequenceR|1940|1931|IGAALLSILS

***** No hits found ******


388|SequenceR|1945|1936|LMRPRIGAAL

>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 1 LMRPRIGAA 9
MRPR GAA
Sbjct: 420 FMRPRPGAA 428


>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 MRPRIGAA 9
MRPR GAA
Sbjct: 428 MRPRPGAA 435


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 1 LMRPRIGAA 9
L RPR+G+A
Sbjct: 74 LPRPRVGSA 82


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain DSM

Query: 2 MRPRIGAA 9
MRPR G+A
Sbjct: 425 MRPRPGSA 432


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LMRPRIGAA 9
+RPR GAA
Sbjct: 415 FLRPRPGAA 423


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 LMRPRIGAA 9
+RPR GAA
Sbjct: 415 FLRPRPGAA 423


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 LMRPRIGAA 9
+RPR GAA
Sbjct: 415 FLRPRPGAA 423


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 LMRPRIGAA 9
+RPR GAA
Sbjct: 415 FLRPRPGAA 423


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 1 LMRPRIGAA 9
+RPR GAA
Sbjct: 415 FLRPRPGAA 423


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 MRPRIGAA 9
+ PR+GAA
Sbjct: 443 LNPRLGAA 450




389|SequenceR|1950|1941|ALEMVLMRPR

***** No hits found ******


390|SequenceR|1955|1946|LSGKSALEMV

>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GKSALEMV 10
GKSALE+V
Sbjct: 90 GKSALEIV 97


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LSGKSALEMV 10
LSGK +EMV
Sbjct: 230 LSGKRIVEMV 239


>sp|CHEB_ARCFU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Archaeoglobus fulgidus

Query: 3 GKSALEMV 10
G SALEM+
Sbjct: 167 GPSALEMI 174




391|SequenceR|1960|1951|QLLRDLSGKS

>sp|PCNA2_PYRAE|DNA polymerase sliding clamp 2|Pyrobaculum aerophilum (strain ATCC

Query: 1 QLLRDLSGK 9
++LRD+SGK
Sbjct: 210 EMLRDISGK 218


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QLLRDLSGK 9
LLRDL GK
Sbjct: 26 HLLRDLGGK 34


>sp|DPCKG_PICTO|GTP-DEPENDENT dephospho-CoA kinase|Picrophilus torridus (strain ATCC 700027

Query: 2 LLRDLSGKS 10
+LRDL+GK+
Sbjct: 157 ILRDLNGKT 165


>sp|ILVC_METLZ|KETOL-ACID reductoisomerase (NADP(+))|Methanocorpusculum labreanum (strain

Query: 3 LRDLSGKS 10
L+DLSGK+
Sbjct: 12 LKDLSGKT 19


>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 2 LLRDLSGK 9
+LRD SGK
Sbjct: 35 ILRDTSGK 42


>sp|PYRH_STAMF|URIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 QLLRDLSGK 9
++ +DLSGK
Sbjct: 26 EIFKDLSGK 34


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLRDLSGK 9
+++DLSGK
Sbjct: 431 VIKDLSGK 438


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LLRDLSGK 9
+LRD SGK
Sbjct: 35 ILRDRSGK 42




392|SequenceR|1965|1956|SAKDQQLLRD

>sp|IDI2_METKA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanopyrus kandleri (strain AV19 /

Query: 1 SAKDQQLLRD 10
SA+D +L+RD
Sbjct: 194 SAEDAKLVRD 203


>sp|PUR7_CENSY|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Cenarchaeum symbiosum (strain A)

Query: 2 AKDQQLLRD 10
A D+Q+LRD
Sbjct: 215 AFDKQILRD 223


>sp|PUR7_NITMS|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 AKDQQLLRD 10
A D+QLLRD
Sbjct: 216 AYDKQLLRD 224




393|SequenceR|1970|1961|LTRTLSAKDQ

>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LTRTLSA 7
LTRTLSA
Sbjct: 146 LTRTLSA 152


>sp|G3P_METS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LTRTLSAKD 9
LTRTLS D
Sbjct: 146 LTRTLSTID 154


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 1 LTRTLSAKDQ 10
+TRTLSA+ +
Sbjct: 553 ITRTLSARSR 562




394|SequenceR|1975|1966|AIRHQLTRTL

>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 4 HQLTRTL 10
H LTRTL
Sbjct: 62 HHLTRTL 68


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain

Query: 4 HQLTRTL 10
H LTRTL
Sbjct: 62 HHLTRTL 68




395|SequenceR|1980|1971|DAVHLAIRHQ

>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 1 DAVHLAIRHQ 10
D +HL RH+
Sbjct: 38 DLIHLLTRHE 47


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 DAVHLAIRHQ 10
D VH+ RH+
Sbjct: 38 DLVHILTRHE 47


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DAVHLAIRH 9
+A+HLA RH
Sbjct: 337 EAIHLAKRH 345


>sp|PSB2_PYRIL|PROTEASOME subunit beta 2|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DAVHLAIR 8
DAV LAIR
Sbjct: 153 DAVDLAIR 160


>sp|HUTI_THEAC|IMIDAZOLONEPROPIONASE acidophilum (strain ATCC 25905

Query: 2 AVHLAIRH 9
A+HLA+R+
Sbjct: 322 AMHLAVRN 329




396|SequenceR|1985|1976|LYRLGDAVHL

>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YRLGDAVHL 10
YRLG+ VHL
Sbjct: 427 YRLGEDVHL 435


>sp|MOBA_PYRAB|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus abyssi (strain

Query: 1 LYRLGDAV 8
LY+LGDA+
Sbjct: 148 LYKLGDAI 155


>sp|PSB2_IGNH4|PROTEASOME subunit beta 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 YRLGDAVHL 10
YRLGD + L
Sbjct: 201 YRLGDVIRL 209


>sp|MOBA_PYRHO|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus horikoshii

Query: 2 YRLGDAV 8
Y+LGDA+
Sbjct: 151 YKLGDAI 157


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYRLGDAV 8
LYRL DA+
Sbjct: 99 LYRLEDAI 106


>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 1 LYRLGDAVHL 10
L RLGDA+++
Sbjct: 590 LVRLGDALNV 599


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus kandleri

Query: 1 LYRLGD 6
LYR+GD
Sbjct: 337 LYRIGD 342


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 LYRLGDAVHL 10
LYR GD V +
Sbjct: 1099 LYRAGDIVKM 1108


>sp|Y1120_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1120|Methanocaldococcus

Query: 1 LYRLGD 6
+YRLGD
Sbjct: 139 IYRLGD 144


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 4 LGDAVH 9
LGDAVH
Sbjct: 305 LGDAVH 310


>sp|RL21_STAMF|LARGE ribosomal subunit protein eL21|Staphylothermus marinus (strain

Query: 2 YRLGDAVHL 10
Y+ GD VH+
Sbjct: 36 YKPGDKVHI 44




397|SequenceR|1990|1981|IMASHLYRLG

>sp|Y338_METJA|UNCHARACTERIZED protein MJ0338|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IMASHLYRL 9
+MA+H YR+
Sbjct: 73 VMANHFYRM 81


>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 1 IMASHLYRLG 10
I HLYR+G
Sbjct: 122 IGKDHLYRIG 131


>sp|PRIL_METTH|DNA primase large subunit PriL|Methanothermobacter thermautotrophicus

Query: 1 IMASHLYRLG 10
IMA LY LG
Sbjct: 139 IMAEVLYELG 148


>sp|RS4_METMJ|SMALL ribosomal subunit protein uS4|Methanoculleus marisnigri (strain

Query: 2 MASHLYRLG 10
+ +HLYR G
Sbjct: 78 LVNHLYRYG 86




398|SequenceR|1995|1986|LDRYIIMASH

>sp|MPTA_METLZ|GTP cyclohydrolase MptA|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DRYIIMASH 10
+ Y++MA+H
Sbjct: 241 ESYVVMAAH 249




399|SequenceR|2000|1991|VNHPKLDRYI

>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 HPKLDR 8
HPKLDR
Sbjct: 372 HPKLDR 377


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NHPKLDRYI 10
NHP L RY+
Sbjct: 256 NHPTLRRYL 264


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VNHPKLDRYI 10
+NHP L +Y+
Sbjct: 273 MNHPTLKKYL 282


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VNHPKLDRYI 10
+NHP L +Y+
Sbjct: 274 MNHPTLKKYL 283


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VNHPKLDRYI 10
+NHP L +Y+
Sbjct: 274 MNHPTLKKYL 283


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VNHPKLDRYI 10
+NHP L +Y+
Sbjct: 274 MNHPTLKKYL 283


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 3 HPKLDRY 9
HPK+D Y
Sbjct: 107 HPKIDTY 113


>sp|RNP3_METAC|RIBONUCLEASE P protein component 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VNHPKLDR 8
+NHP DR
Sbjct: 110 LNHPAFDR 117


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 HPKLDR 8
HP+LDR
Sbjct: 359 HPELDR 364


>sp|KCY_THEKO|CYTIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 HPKLDRYI 10
HP++DR I
Sbjct: 61 HPEIDREI 68


>sp|AMT1_METJA|AMMONIUM transporter Amt1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PKLDRYI 10
P++D+YI
Sbjct: 174 PRIDKYI 180


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 3 HPKLDRYI 10
+PKL RYI
Sbjct: 448 NPKLGRYI 455


>sp|RS17_HALSA|SMALL ribosomal subunit protein uS17|Halobacterium salinarum (strain

Query: 4 PKLDRYI 10
PK DRY+
Sbjct: 56 PKYDRYM 62


>sp|RS17_HALS3|SMALL ribosomal subunit protein uS17|Halobacterium salinarum (strain

Query: 4 PKLDRYI 10
PK DRY+
Sbjct: 56 PKYDRYM 62


>sp|NADM_AERPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 HPKLDRYI 10
HP++ RY+
Sbjct: 149 HPQVRRYV 156


>sp|KCY_THESM|CYTIDYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 HPKLDRYI 10
HP++DR +
Sbjct: 61 HPEIDREV 68


>sp|KCY_PYRFU|CYTIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HPKLDRYI 10
HP++DR +
Sbjct: 61 HPEIDREV 68


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 HPKLDRYI 10
HP+L RY+
Sbjct: 192 HPRLFRYV 199


>sp|KCY_PYRAB|CYTIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 HPKLDRYI 10
HP++DR +
Sbjct: 61 HPEIDREV 68


>sp|KCY_PYRHO|CYTIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 HPKLDRYI 10
HP++DR +
Sbjct: 61 HPEIDREV 68


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VNHPKLDRYI 10
++HP L +Y+
Sbjct: 260 MDHPTLKKYL 269


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 1 VNHPKLDRYI 10
V HP+L R +
Sbjct: 292 VQHPRLKRKV 301


>sp|RPO11_METVS|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus vannielii (strain ATCC

Query: 1 VNHPKLDRYI 10
V HP+ RYI
Sbjct: 50 VLHPETGRYI 59


>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 5 KLDRYI 10
K+DRYI
Sbjct: 205 KIDRYI 210


>sp|Y188_METJA|UNCHARACTERIZED protein MJ0188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PKLDRYI 10
PKLD Y+
Sbjct: 210 PKLDAYV 216


>sp|TRM56_PICTO|TRNA (cytidine(56)-2'-O)-methyltransferase|Picrophilus torridus (strain

Query: 1 VNHPKLDRYI 10
+NH KL +YI
Sbjct: 159 MNHGKLVKYI 168


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 1 VNHPKLDRYI 10
V HPKL + +
Sbjct: 331 VEHPKLGKVV 340


>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 HPKLDRYI 10
HP L++Y+
Sbjct: 269 HPALEKYL 276


>sp|SYT_PYRHO|THREONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 HPKLDRYI 10
HP L++Y+
Sbjct: 267 HPALEKYL 274


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 2 NHPKLDRYI 10
NH KL+R +
Sbjct: 361 NHDKLERKV 369


>sp|SYT_PYRFU|THREONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HPKLDRYI 10
HP L++Y+
Sbjct: 267 HPALEKYL 274


>sp|SYT_PYRAB|THREONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 HPKLDRYI 10
HP L++Y+
Sbjct: 267 HPALEKYL 274


>sp|SYT_THEKO|THREONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 HPKLDRYI 10
HP L++Y+
Sbjct: 268 HPALEKYL 275


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 HPKLDRYI 10
HP L++Y+
Sbjct: 268 HPALEKYL 275


>sp|Y334_ARCFU|UNCHARACTERIZED protein AF_0334|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VNHPKL 6
VNHPK+
Sbjct: 54 VNHPKV 59


>sp|SYT_THESM|THREONINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 3 HPKLDRYI 10
HP L++Y+
Sbjct: 267 HPALEKYL 274


>sp|AGL8_HALVD|LOW-SALT glycan biosynthesis protein Agl8|Haloferax volcanii (strain ATCC

Query: 3 HPKLDRYI 10
HP ++RY+
Sbjct: 145 HPYVERYL 152




400|SequenceR|2005|1996|LTFLLVNHPK

>sp|Y1278_METJA|UNCHARACTERIZED protein MJ1278|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTFLLVNHP 9
LTF VNHP
Sbjct: 52 LTFKFVNHP 60


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 LLVNHP 9
LLVNHP
Sbjct: 19 LLVNHP 24


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 LLVNHP 9
LLVNHP
Sbjct: 19 LLVNHP 24


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LTFLLVNH 8
LTF++ NH
Sbjct: 615 LTFMIFNH 622


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 LTFLLVNH 8
LTF++ NH
Sbjct: 615 LTFMIFNH 622


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 LTFLLVNH 8
LTF++ NH
Sbjct: 615 LTFMIFNH 622


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 4 LLVNHP 9
LLVNHP
Sbjct: 20 LLVNHP 25


>sp|LIPB_PYRCJ|PROBABLE octanoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 FLLVNHP 9
F+LV HP
Sbjct: 33 FILVEHP 39


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LTFLLVNH 8
LTF++ NH
Sbjct: 625 LTFMIFNH 632


>sp|TAL_THEVO|PROBABLE transaldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LLVNHPK 10
LL+ HPK
Sbjct: 194 LLIKHPK 200


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 LTFLLVNH 8
LTF + NH
Sbjct: 618 LTFFIFNH 625


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LTFLLVNH 8
LTF + NH
Sbjct: 618 LTFFIFNH 625


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LTFLLVNH 8
LTF + NH
Sbjct: 606 LTFFIFNH 613


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LTFLLVNH 8
LTF + NH
Sbjct: 606 LTFFIFNH 613


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LTFLLVNH 8
LTF + NH
Sbjct: 618 LTFFIFNH 625


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LTFLLVNH 8
LTF + NH
Sbjct: 618 LTFFIFNH 625


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LTFLLVNH 8
LTF + NH
Sbjct: 606 LTFFIFNH 613


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LTFLLVNH 8
LTF + NH
Sbjct: 606 LTFFIFNH 613


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LTFLLVNH 8
LTF + NH
Sbjct: 606 LTFFIFNH 613


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LTFLLVNH 8
LTF + NH
Sbjct: 618 LTFFIFNH 625


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LTFLLVNH 8
LTF + NH
Sbjct: 665 LTFFIFNH 672


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LTFLLVNH 8
LTF + NH
Sbjct: 591 LTFFIFNH 598


>sp|HIS1_METMA|ATP phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TFLLVNHPK 10
T LL+NH K
Sbjct: 163 TTLLINHLK 171


>sp|Y562_ARCFU|UNCHARACTERIZED protein AF_0562|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTFLLVNHP 9
L F L+NHP
Sbjct: 75 LPFKLLNHP 83




401|SequenceR|2010|2001|AANPYLTFLL

>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AANPYLTFLL 10
A NPYL F L
Sbjct: 343 ACNPYLAFAL 352


>sp|G1PDH_CALMQ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Caldivirga maquilingensis (strain ATCC

Query: 2 ANPYLTFLL 10
A+PY++FL+
Sbjct: 121 ASPYISFLM 129


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AANPYLTF 8
A NPYL F
Sbjct: 343 ACNPYLAF 350


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 1 AANPYLTF 8
A NPYL F
Sbjct: 343 ACNPYLAF 350


>sp|MTRA2_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter marburgensis

Query: 2 ANPYLTFLL 10
ANP L FLL
Sbjct: 71 ANPNLRFLL 79


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AANPYLT 7
A NPYLT
Sbjct: 201 AENPYLT 207


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 AANPYLTF 8
+ANPY F
Sbjct: 325 SANPYFAF 332


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 NPYLTF 8
NPY TF
Sbjct: 145 NPYFTF 150


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AANPYLTF 8
++NPYL F
Sbjct: 369 SSNPYLVF 376


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 1 AANPYLTF 8
+ANPY F
Sbjct: 325 SANPYFAF 332


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AANPYLTF 8
+ANPY F
Sbjct: 325 SANPYFAF 332


>sp|GLNA_METTH|GLUTAMINE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AANPYLTF 8
+ NPYL F
Sbjct: 339 SCNPYLAF 346


>sp|GLNA_HALVD|GLUTAMINE synthetase|Haloferax volcanii (strain ATCC 29605

Query: 1 AANPYLTF 8
+ NPYL F
Sbjct: 352 SCNPYLAF 359


>sp|MFND_METJA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AANPYLTFL 9
A N YLT+L
Sbjct: 136 AGNKYLTYL 144


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NPYLTF 8
NPYL F
Sbjct: 353 NPYLAF 358


>sp|ARFB_METIM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus infernus (strain

Query: 5 YLTFLL 10
YLTFLL
Sbjct: 86 YLTFLL 91


>sp|PURO_METTP|IMP cyclohydrolase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 NPYLTF 8
NPY+T+
Sbjct: 52 NPYITY 57


>sp|PURO_METJA|IMP cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NPYLTF 8
NPY+T+
Sbjct: 54 NPYITY 59


>sp|MCT_HALMA|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ANPYLTFLL 10
A PY T LL
Sbjct: 17 AGPYCTMLL 25


>sp|MCT_HALHT|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula hispanica (strain ATCC 33960

Query: 2 ANPYLTFLL 10
A PY T LL
Sbjct: 17 AGPYCTMLL 25


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ANPYLTF 8
AN YLTF
Sbjct: 324 ANEYLTF 330


>sp|PURO_METMP|IMP cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 3 NPYLTF 8
NPY+T+
Sbjct: 54 NPYITY 59


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 3 NPYLTF 8
NPYL+F
Sbjct: 144 NPYLSF 149


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ANPYLTF 8
AN YLTF
Sbjct: 324 ANEYLTF 330


>sp|PURO_METM5|IMP cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 3 NPYLTF 8
NPY+T+
Sbjct: 54 NPYITY 59


>sp|PURO_METVS|IMP cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 3 NPYLTF 8
NPY+T+
Sbjct: 54 NPYITY 59


>sp|PURO_METM7|IMP cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 3 NPYLTF 8
NPY+T+
Sbjct: 54 NPYITY 59


>sp|PURO_METM6|IMP cyclohydrolase|Methanococcus maripaludis (strain C6 /

Query: 3 NPYLTF 8
NPY+T+
Sbjct: 54 NPYITY 59




402|SequenceR|2015|2006|IKAIIAANPY

>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IKAIIAANP 9
IK IIAANP
Sbjct: 376 IKNIIAANP 384


>sp|TSR3_METJA|16S rRNA aminocarboxypropyltransferase|Methanocaldococcus jannaschii

Query: 2 KAIIAANPY 10
KAI+ NPY
Sbjct: 30 KAILLKNPY 38


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 2 KAIIAANPY 10
KAI AA P+
Sbjct: 306 KAIFAAEPW 314


>sp|ARCH_PYRIL|PROTEIN archease|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IKAIIAANPY 10
IKA++ PY
Sbjct: 101 IKAVLYGEPY 110




403|SequenceR|2020|2011|IGYDAIKAII

>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 1 IGYDAIK 7
+GYDAIK
Sbjct: 178 LGYDAIK 184


>sp|RS13_SACS2|SMALL ribosomal subunit protein uS13|Saccharolobus solfataricus (strain

Query: 1 IGYDAIKAII 10
IGY+ KAII
Sbjct: 32 IGYNTAKAII 41


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IGYDAIKAII 10
IGYD AI+
Sbjct: 428 IGYDKASAIV 437


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 2 GYDAIKAI 9
YDAIK++
Sbjct: 249 AYDAIKSV 256


>sp|PYLD_METAC|PYRROLYSINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GYDAIKAII 10
GYDA KA++
Sbjct: 169 GYDADKALL 177


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGYDAIKAI 9
IGY+A KA+
Sbjct: 197 IGYEATKAL 205


>sp|SPSS1_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanoregula boonei (strain DSM 21154

Query: 4 DAIKAII 10
DAIKAII
Sbjct: 31 DAIKAII 37


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 3 YDAIKA 8
YDAIKA
Sbjct: 398 YDAIKA 403


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 2 GYDAIK 7
GYDA+K
Sbjct: 259 GYDALK 264


>sp|RS13_SULTO|SMALL ribosomal subunit protein uS13|Sulfurisphaera tokodaii (strain

Query: 1 IGYDAIKAII 10
IGY+ +AI+
Sbjct: 34 IGYNTARAIV 43


>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GYDAIKAI 9
G DAIKA+
Sbjct: 127 GLDAIKAL 134




404|SequenceR|2025|2016|CCYQAIGYDA

>sp|Y2042_PYRFU|UPF0215 protein PF2042|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YQAIGYDA 10
YQAIG DA
Sbjct: 149 YQAIGIDA 156


>sp|REG8_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1692|Pyrococcus horikoshii

Query: 3 YQAIGYD 9
Y++IGYD
Sbjct: 58 YESIGYD 64


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 CYQAIGYD 9
C++A+G D
Sbjct: 95 CFKALGLD 102


>sp|Y3537_METJA|UNCHARACTERIZED protein MJECL37|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CYQAIGYD 9
C+Q GY+
Sbjct: 11 CFQKYGYE 18


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CYQAIG 7
CY AIG
Sbjct: 46 CYMAIG 51


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 1 CCYQAIGYD 9
CC +A+ YD
Sbjct: 303 CCAEAVRYD 311


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 3 YQAIGYDA 10
Y+A+G DA
Sbjct: 24 YEALGLDA 31


>sp|AROE_HALMA|SHIKIMATE dehydrogenase (NADP(+))|Haloarcula marismortui (strain ATCC 43049

Query: 3 YQAIGYDA 10
Y+A+G DA
Sbjct: 24 YEALGLDA 31


>sp|HYD1D_PYRFU|SULFHYDROGENASE 1 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CYQAIGYD 9
C AIGYD
Sbjct: 206 CRGAIGYD 213




405|SequenceR|2030|2021|KIGMRCCYQA

>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IGMRCCYQA 10
IG R CY+A
Sbjct: 59 IGPRLCYEA 67


>sp|AROE_METMA|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IGMRCCYQA 10
+GM C Y A
Sbjct: 28 LGMDCIYHA 36


>sp|AROE_METBF|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 2 IGMRCCYQA 10
+GM C Y A
Sbjct: 28 LGMDCIYHA 36


>sp|AROE_METAC|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 2 IGMRCCYQA 10
+GM C Y A
Sbjct: 28 LGMDCIYHA 36


>sp|METE_PYRHO|METHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KIGMRCCY 8
K+G+ CY
Sbjct: 206 KVGLHVCY 213


>sp|METE_PYRFU|METHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KIGMRCCY 8
K+G+ CY
Sbjct: 206 KVGLHVCY 213


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 KIGMRCCY 8
K+G+ CY
Sbjct: 206 KVGLHVCY 213




406|SequenceR|2035|2026|TGESTKIGMR

>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 1 TGESTKIGM 9
TGE+ KIG+
Sbjct: 79 TGETAKIGL 87


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 1 TGESTKIGM 9
TGE+ KIG+
Sbjct: 78 TGETAKIGV 86


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 1 TGESTKIGM 9
TGE+ KIG+
Sbjct: 78 TGETAKIGV 86


>sp|AATB_METTL|A-TYPE ATP synthase subunit B|Methanothermococcus thermolithotrophicus

Query: 1 TGESTKIGM 9
TGE+ KIG+
Sbjct: 10 TGETAKIGV 18


>sp|PDXT_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaera stadtmanae

Query: 2 GESTKIGMR 10
GES+ IGM
Sbjct: 53 GESSTIGMH 61


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 TGESTKIG 8
TGE KIG
Sbjct: 602 TGEDVKIG 609


>sp|PDXT_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus solfataricus

Query: 2 GESTKIGM 9
GEST IG+
Sbjct: 52 GESTTIGL 59


>sp|PDXT_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 2 GESTKIGM 9
GEST IG+
Sbjct: 52 GESTTIGL 59


>sp|PDXT_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 2 GESTKIGM 9
GEST IG+
Sbjct: 52 GESTTIGL 59


>sp|PDXT_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 2 GESTKIGM 9
GEST IG+
Sbjct: 52 GESTTIGL 59


>sp|PDXT_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 2 GESTKIGM 9
GEST IG+
Sbjct: 52 GESTTIGL 59


>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 2 GESTKIGM 9
GEST IG+
Sbjct: 52 GESTTIGL 59


>sp|PDXT_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 2 GESTKIGM 9
GEST IG+
Sbjct: 52 GESTTIGL 59




407|SequenceR|2040|2031|ARFGPTGEST

>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RFGPTGES 9
+FGPTGES
Sbjct: 459 KFGPTGES 466


>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RFGPTGES 9
+FGPTGES
Sbjct: 461 KFGPTGES 468


>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 1 ARFGPTGES 9
+RFG GES
Sbjct: 101 SRFGSKGES 109


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ARFGPTGE 8
A FGP+GE
Sbjct: 378 AGFGPSGE 385


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 FGPTGE 8
FGPTGE
Sbjct: 479 FGPTGE 484


>sp|Y3997_METAC|UPF0288 protein MA_3997|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FGPTGE 8
FGPTGE
Sbjct: 479 FGPTGE 484


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 3 FGPTGE 8
FGPTGE
Sbjct: 479 FGPTGE 484


>sp|APAUH_THEKO|N(1)-AMINOPROPYLAGMATINE ureohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ARFGPT 6
ARFGPT
Sbjct: 41 ARFGPT 46


>sp|AMT1_HALMT|AMMONIUM transporter Amt1|Haloferax mediterranei (strain ATCC 33500

Query: 2 RFGPTGES 9
RFG +GES
Sbjct: 199 RFGASGES 206


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 FGPTGE 8
FGP+GE
Sbjct: 380 FGPSGE 385


>sp|Y796_METKA|UPF0288 protein MK0796|Methanopyrus kandleri (strain AV19 /

Query: 3 FGPTGES 9
+GPTGE+
Sbjct: 467 YGPTGET 473


>sp|SPEH_PYRIL|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RFGPTG 7
RFGP G
Sbjct: 55 RFGPNG 60


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 2 RFGPTGE 8
RFGP G+
Sbjct: 116 RFGPLGK 122


>sp|SPEH_PYRAR|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RFGPTG 7
RFGP G
Sbjct: 55 RFGPNG 60


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 3 FGPTGE 8
+GPTGE
Sbjct: 482 YGPTGE 487


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 2 RFGPTGES 9
RFGPT +
Sbjct: 349 RFGPTASA 356


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 2 RFGPTGES 9
RFGPT +
Sbjct: 349 RFGPTASA 356


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 3 FGPTGE 8
FGP+GE
Sbjct: 379 FGPSGE 384


>sp|SPEH_PYRNV|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RFGPTG 7
RFGP G
Sbjct: 54 RFGPEG 59




408|SequenceR|2045|2036|RAVEPARFGP

>sp|NADM_SULTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RAVEPARFGP 10
RAV P RF P
Sbjct: 2 RAVFPGRFQP 11


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 3 VEPARFGP 10
++P RFGP
Sbjct: 112 LDPIRFGP 119


>sp|PCNA_NATPD|DNA polymerase sliding clamp|Natronomonas pharaonis (strain ATCC

Query: 1 RAVEPARFG 9
RAV+PA G
Sbjct: 37 RAVDPANVG 45


>sp|PCNA_HALWD|DNA polymerase sliding clamp|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RAVEPARFG 9
RAV+PA G
Sbjct: 37 RAVDPANVG 45


>sp|PCNA_HALMA|DNA polymerase sliding clamp|Haloarcula marismortui (strain ATCC

Query: 1 RAVEPARFG 9
RAV+PA G
Sbjct: 37 RAVDPANVG 45


>sp|PCNA_HALLT|DNA polymerase sliding clamp|Halorubrum lacusprofundi (strain ATCC

Query: 1 RAVEPARFG 9
RAV+PA G
Sbjct: 37 RAVDPANVG 45


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 1 RAVEPARFG 9
RAVE +FG
Sbjct: 88 RAVEAKKFG 96


>sp|PCNA_HALSA|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC

Query: 1 RAVEPARFG 9
RAV+PA G
Sbjct: 37 RAVDPASVG 45


>sp|PCNA_HALS3|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC

Query: 1 RAVEPARFG 9
RAV+PA G
Sbjct: 37 RAVDPASVG 45


>sp|NADM1_SULAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase 1|Sulfolobus acidocaldarius (strain ATCC

Query: 1 RAVEPARFGP 10
RA+ P RF P
Sbjct: 2 RALFPGRFQP 11


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VEPARFGP 10
++P RFGP
Sbjct: 112 LDPIRFGP 119


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 3 VEPARFGP 10
++P RFGP
Sbjct: 112 LDPIRFGP 119


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VEPARFGP 10
++P RFGP
Sbjct: 112 LDPIRFGP 119


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 3 VEPARFGP 10
++P RFGP
Sbjct: 112 LDPIRFGP 119


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 3 VEPARFGP 10
++P RFGP
Sbjct: 112 LDPIRFGP 119


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 3 VEPARFGP 10
++P RFGP
Sbjct: 114 LDPLRFGP 121


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 4 EPARFGP 10
+P RFGP
Sbjct: 101 QPIRFGP 107


>sp|TRPF_PYRIL|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RAVEPARFG 9
R+VEP R G
Sbjct: 34 RSVEPRRLG 42


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 EPARFGP 10
EP R+GP
Sbjct: 586 EPVRWGP 592


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 VEPARFGP 10
VEP R GP
Sbjct: 356 VEPDRVGP 363


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RAVEPARFG 9
RAV ARFG
Sbjct: 449 RAVALARFG 457




409|SequenceR|2050|2041|YIVNGRAVEP

>sp|Y1965_THEON|PROTEIN TON_1965|Thermococcus onnurineus (strain NA1)

Query: 1 YIVNGRAVEP 10
Y+ NGR +EP
Sbjct: 23 YVRNGRTIEP 32


>sp|Y1450_THEGJ|PROTEIN TGAM_1450|Thermococcus gammatolerans (strain DSM 15229

Query: 1 YIVNGRAVEP 10
Y+ NGR +EP
Sbjct: 23 YVRNGRVIEP 32


>sp|ENO_SACS2|ENOLASE solfataricus (strain ATCC 35092

Query: 1 YIVNGRAVEP 10
YI++GR ++P
Sbjct: 254 YIIDGRELDP 263


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 702 YVIGGRAME 710


>sp|Y2090_METMA|UPF0251 protein MM_2090|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IVNGRAVE 9
+VNG+A+E
Sbjct: 80 LVNGKAIE 87


>sp|Y1017_METAC|UPF0251 protein MA_1017|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IVNGRAVE 9
+VNG+A+E
Sbjct: 80 LVNGKAIE 87


>sp|MFNE_METJA|[5-(AMINOMETHYL)FURAN-3-YL]METHYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YIVNGRAVE 9
Y+VNGR E
Sbjct: 186 YVVNGRHPE 194


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 161 YVIGGRAME 169


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 1 YIVNGRAVE 9
Y++NG+ V+
Sbjct: 597 YVINGKPVD 605


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 700 YVLGGRAME 708


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 35 YVLGGRAME 43


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 702 YVLGGRAME 710


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 728 YVLGGRAME 736


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 700 YVLGGRAME 708


>sp|Y748_THEPD|PROTEIN Tpen_0748|Thermofilum pendens (strain DSM 2475

Query: 1 YIVNGRAVEP 10
Y+ N R +EP
Sbjct: 23 YLENARVIEP 32


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 701 YVLGGRAME 709


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 703 YVLGGRAME 711


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 711 YVLGGRAME 719


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 711 YVLGGRAME 719


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 712 YVLGGRAME 720


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 700 YVLGGRAME 708


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 719 YVLGGRAME 727


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 YIVNGRAVE 9
Y++ GRA+E
Sbjct: 713 YVLGGRAME 721


>sp|Y1979_PYRFU|PROTEIN PF1979|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YIVNGRAVEP 10
Y+ GR +EP
Sbjct: 23 YLRTGREIEP 32


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YIVNGRAVE 9
YI+ GRA E
Sbjct: 232 YIIRGRAEE 240


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YIVNGRAVE 9
YI+NG +E
Sbjct: 153 YIINGENLE 161


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YIVNGRAVE 9
YI+NG +E
Sbjct: 153 YIINGENLE 161


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 YIVNGRAVE 9
YI+NG +E
Sbjct: 153 YIINGENLE 161


>sp|DPCKG_THEAC|GTP-DEPENDENT dephospho-CoA kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 NGRAVEP 10
NGR V+P
Sbjct: 13 NGRVVDP 19


>sp|TRPD_THEVO|ANTHRANILATE phosphoribosyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YIVNGRAV 8
Y+V+GR++
Sbjct: 237 YVVDGRSI 244




410|SequenceR|2055|2046|DAQQNYIVNG

>sp|CSM3_METTH|CRISPR system Cms endoribonuclease Csm3|Methanothermobacter

Query: 3 QQNYIVNG 10
Q+NYI+ G
Sbjct: 4 QKNYIITG 11


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 4 QNYIVNG 10
QNY VNG
Sbjct: 339 QNYYVNG 345


>sp|FUCA_METM7|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain C7 /

Query: 2 AQQNYIVN 9
AQ NYI+N
Sbjct: 170 AQLNYIIN 177


>sp|FUCA_METMP|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 AQQNYIVN 9
AQ NYI+N
Sbjct: 170 AQLNYIMN 177


>sp|FUCA_METM5|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain C5 /

Query: 2 AQQNYIVN 9
AQ NYI+N
Sbjct: 170 AQLNYIMN 177




411|SequenceR|2060|2051|GFSYVDAQQN

>sp|Y1683_ARCFU|VAPC ribonuclease AF_1683|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFSYVDA 7
GFSY DA
Sbjct: 98 GFSYTDA 104


>sp|Y1485_METJA|UNCHARACTERIZED cation transporter MJ1485|Methanocaldococcus jannaschii (strain

Query: 2 FSYVDA 7
FSYVDA
Sbjct: 101 FSYVDA 106


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GFSYVD 6
GF+YVD
Sbjct: 190 GFAYVD 195


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GFSYVD 6
GF+YVD
Sbjct: 189 GFAYVD 194


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GFSYVD 6
GF+YVD
Sbjct: 132 GFAYVD 137




412|SequenceR|2065|2056|DYLLLGFSYV

>sp|QUEC_METAC|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DYLLLGFS 8
DYL++GF+
Sbjct: 127 DYLVVGFN 134


>sp|SUCC_STAMF|SUCCINATE--COA ligase [ADP-forming] subunit beta|Staphylothermus marinus (strain

Query: 5 LGFSYV 10
LGFSYV
Sbjct: 239 LGFSYV 244


>sp|LIPA_SULAC|LIPOYL synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 LGFSYV 10
LGFSYV
Sbjct: 251 LGFSYV 256


>sp|Y672_METJA|UNCHARACTERIZED transporter MJ0672|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DYLLLGFSY 9
D+LLLG +Y
Sbjct: 155 DFLLLGVAY 163


>sp|SECD_HALVD|PROTEIN-EXPORT membrane protein SecD|Haloferax volcanii (strain ATCC 29605

Query: 2 YLLLGFS 8
Y+LLGF+
Sbjct: 406 YILLGFA 412


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 DYLLLGFSYV 10
+YLLL SY+
Sbjct: 7 NYLLLKSSYI 16


>sp|Y1220_SULTO|UNCHARACTERIZED protein STK_12200|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DYLLLGFS 8
DY+L+GF+
Sbjct: 89 DYVLVGFN 96


>sp|QUEC_METMA|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DYLLLGFS 8
DY+++GF+
Sbjct: 127 DYIVVGFN 134


>sp|PTFC_HALVD|PTS system fructose-specific EIIC component|Haloferax volcanii (strain

Query: 3 LLLGFSYV 10
+LLGFS++
Sbjct: 279 VLLGFSFI 286




413|SequenceR|2070|2061|GTTLIDYLLL

>sp|GATB_AERPE|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 4 LIDYLLL 10
LIDYLLL
Sbjct: 182 LIDYLLL 188


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GTTLIDYLL 9
G LIDY+L
Sbjct: 47 GVELIDYVL 55


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GTTLIDYLL 9
G LIDY+L
Sbjct: 49 GEKLIDYVL 57


>sp|HMDH_SACS2|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GTTLIDY 7
G+T+IDY
Sbjct: 49 GSTVIDY 55


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 TTLIDYL 8
TTL+DY+
Sbjct: 31 TTLLDYM 37


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 2 TTLIDYL 8
TTL+DY+
Sbjct: 19 TTLLDYI 25


>sp|RS5_AERPE|SMALL ribosomal subunit protein uS5|Aeropyrum pernix (strain ATCC

Query: 2 TTLIDYLL 9
T ++DYLL
Sbjct: 45 TEIVDYLL 52


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GTTLIDYLL 9
G LIDY+L
Sbjct: 45 GQRLIDYVL 53


>sp|MCH_HALSA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTTLIDY 7
GTT+ID+
Sbjct: 32 GTTVIDF 38


>sp|MCH_HALS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GTTLIDY 7
GTT+ID+
Sbjct: 32 GTTVIDF 38




414|SequenceR|2075|2066|EVIRGGTTLI

>sp|Y641_THEON|UPF0235 protein TON_0641|Thermococcus onnurineus (strain NA1)

Query: 1 EVIRGGTT 8
E+IRGGT+
Sbjct: 66 EIIRGGTS 73


>sp|Y038_PYRAB|UPF0284 protein PYRAB00380|Pyrococcus abyssi (strain GE5 /

Query: 2 VIRGGTTL 9
VIRGGT L
Sbjct: 79 VIRGGTYL 86


>sp|COFD_METAC|2-PHOSPHO-L-LACTATE transferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VIRGGTTL 9
+IRGGT+L
Sbjct: 102 LIRGGTSL 109


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 3 IRGGTTLI 10
I GGTTL+
Sbjct: 76 IFGGTTLV 83


>sp|Y853_THEKO|UPF0284 protein TK0853|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VIRGGTTL 9
V+RGGT L
Sbjct: 79 VVRGGTYL 86


>sp|Y534_THEGJ|UPF0284 protein TGAM_0534|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VIRGGTTL 9
V+RGGT L
Sbjct: 79 VVRGGTYL 86


>sp|Y303_PYRFU|UPF0284 protein PF0303|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VIRGGTTL 9
V+RGGT L
Sbjct: 79 VVRGGTYL 86


>sp|Y034_PYRHO|UPF0284 protein PH0034|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VIRGGTTL 9
V+RGGT L
Sbjct: 82 VVRGGTYL 89


>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus horikoshii

Query: 1 EVIRGGTTL 9
E+IRGG L
Sbjct: 352 EIIRGGGNL 360


>sp|DPHB_SACI7|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VIRGGTTLI 10
+++GG TLI
Sbjct: 50 LVKGGKTLI 58


>sp|DPHB_SACI6|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VIRGGTTLI 10
+++GG TLI
Sbjct: 50 LVKGGKTLI 58


>sp|DPHB_SACI4|DIPHTHINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VIRGGTTLI 10
+++GG TLI
Sbjct: 50 LVKGGKTLI 58


>sp|DPHB_SACI3|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 VIRGGTTLI 10
+++GG TLI
Sbjct: 50 LVKGGKTLI 58


>sp|DPHB_SACI2|DIPHTHINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VIRGGTTLI 10
+++GG TLI
Sbjct: 50 LVKGGKTLI 58


>sp|DPHB_SACI1|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 VIRGGTTLI 10
+++GG TLI
Sbjct: 50 LVKGGKTLI 58




415|SequenceR|2080|2071|PFKLGEVIRG

>sp|RNH2_METB6|RIBONUCLEASE HII|Methanoregula boonei (strain DSM 21154

Query: 1 PFKLGEVIRG 10
PF+ E +RG
Sbjct: 107 PFRYAETVRG 116


>sp|GGGPS_PYRIL|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PFKLGEVIRG 10
P KLGE+IR
Sbjct: 226 PEKLGEIIRA 235


>sp|Y103_METJA|UNCHARACTERIZED protein MJ0103|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFKLGEVIR 9
PFK+GEV +
Sbjct: 370 PFKVGEVTK 378


>sp|GGGPS_PYRAE|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PFKLGEVIRG 10
P KLGE++R
Sbjct: 226 PEKLGEIVRA 235


>sp|Y941_ARCFU|UNCHARACTERIZED protein AF_0941|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KLGEVIRG 10
++GE+IRG
Sbjct: 10 RMGEIIRG 17


>sp|MRE11_SULTO|DNA double-strand break repair protein|Sulfurisphaera tokodaii (strain

Query: 1 PFKLGEV 7
P+KLGE+
Sbjct: 118 PYKLGEI 124


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 PFKLGE 6
PFKLGE
Sbjct: 402 PFKLGE 407


>sp|DHYS_HALSA|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PFKLGE 6
PFK+GE
Sbjct: 117 PFKMGE 122


>sp|DHYS_HALS3|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PFKLGE 6
PFK+GE
Sbjct: 117 PFKMGE 122


>sp|GGGPS_PYRAR|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PFKLGEVIRG 10
P KLGE++R
Sbjct: 226 PEKLGEIVRA 235


>sp|Y694_METJA|UNCHARACTERIZED NOP5 family protein MJ0694|Methanocaldococcus jannaschii (strain

Query: 1 PFKLGEVIR 9
PF +GE +R
Sbjct: 72 PFNIGEFLR 80


>sp|Y751_METJA|TNPB-LIKE protein MJ0751|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FKLGEVI 8
FK+GEVI
Sbjct: 42 FKIGEVI 48


>sp|Y1511_METMJ|UPF0316 protein Memar_1511|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PFKLGEVIR 9
PF G VIR
Sbjct: 188 PFSFGRVIR 196


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PFKLGEVIRG 10
PF + E +RG
Sbjct: 244 PFLVSEAVRG 253


>sp|Y3501_METJA|UNCHARACTERIZED protein MJECL01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFKLGEVIRG 10
PFK +VI+G
Sbjct: 138 PFKQLDVIKG 147


>sp|PSB2_IGNH4|PROTEASOME subunit beta 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FKLGEVIR 9
++LG+VIR
Sbjct: 201 YRLGDVIR 208


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus (strain

Query: 1 PFKLGEVIR 9
P KLGE+I+
Sbjct: 338 PKKLGEIIK 346


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 1 PFKLGEV 7
PFK+GE+
Sbjct: 386 PFKIGEL 392


>sp|RL24_NANEQ|LARGE ribosomal subunit protein uL24|Nanoarchaeum equitans (strain

Query: 1 PFKLGEVIR 9
P K+G+V+R
Sbjct: 59 PIKVGDVVR 67


>sp|RFRNP_HYPBU|RNA-FREE ribonuclease P|Hyperthermus butylicus (strain DSM 5456

Query: 3 KLGEVIRG 10
KLG +IRG
Sbjct: 149 KLGAIIRG 156


>sp|GGGPS_PYRNV|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PFKLGEVIRG 10
P KLGE+++
Sbjct: 226 PEKLGEIVKA 235


>sp|GATA_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PFKLGEVI 8
P KLGEV+
Sbjct: 399 PPKLGEVV 406


>sp|SYFB_PYRAE|PHENYLALANINE--TRNA ligase beta subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FKLGEVIR 9
F++GEV+R
Sbjct: 420 FEVGEVVR 427


>sp|FOLD_METPE|BIFUNCTIONAL protein FolD|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PFKLGEVIRG 10
PF LG+++ G
Sbjct: 118 PFNLGKLLGG 127


>sp|TRM5B_PYRAB|TRNA (guanine(37)-N(1))-methyltransferase Trm5b|Pyrococcus abyssi

Query: 1 PFKLGEVIR 9
P K GE++R
Sbjct: 8 PLKEGEIVR 16


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 FKLGEVI 8
F+LGEVI
Sbjct: 477 FELGEVI 483


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 FKLGEVIRG 10
FK G++++G
Sbjct: 574 FKEGDIVKG 582


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 PFKLGEVIRG 10
PF+LG+ ++
Sbjct: 1195 PFELGKAVKS 1204




416|SequenceR|2085|2076|EDFENPFKLG

>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 2 DFENPFKLG 10
DFENP +G
Sbjct: 204 DFENPIAVG 212


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 2 DFENPFKLG 10
DFENP +G
Sbjct: 203 DFENPIAVG 211


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EDFENPF 7
+DFE PF
Sbjct: 27 DDFEKPF 33


>sp|NAH2_METJA|PROBABLE Na(+)/H(+) antiporter 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EDFENPFKLG 10
ED+ PF LG
Sbjct: 214 EDYIAPFTLG 223


>sp|MTD_METKA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanopyrus

Query: 1 EDFENPFKL 9
E+FENP+ +
Sbjct: 192 EEFENPYAM 200


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDFENPF 7
EDFENP
Sbjct: 323 EDFENPL 329


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 1 EDFENPFKLG 10
EDFE+P + G
Sbjct: 412 EDFESPIEGG 421


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 1 EDFENPFKLG 10
E+ ENP K+G
Sbjct: 386 EELENPRKVG 395


>sp|AATF_THEVO|A-TYPE ATP synthase subunit F|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EDFENP 6
E+FENP
Sbjct: 39 EEFENP 44


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DFENPFK 8
DFE PFK
Sbjct: 304 DFEGPFK 310


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 2 DFENPF 7
DFENP+
Sbjct: 272 DFENPY 277


>sp|Y877_ARCFU|UNCHARACTERIZED protein AF_0877|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EDFENPFKL 9
E+FE FKL
Sbjct: 33 EEFERGFKL 41


>sp|Y788_ARCFU|UNCHARACTERIZED transporter AF_0788|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DFENPFKLG 10
DF++ FK+G
Sbjct: 93 DFKDGFKIG 101


>sp|RL10_ARCFU|LARGE ribosomal subunit protein uL10|Archaeoglobus fulgidus (strain

Query: 4 ENPFKL 9
ENPF+L
Sbjct: 92 ENPFRL 97


>sp|SYN_THEKO|ASPARAGINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EDFENPF 7
E+FE+PF
Sbjct: 311 EEFESPF 317


>sp|ENDA_AERPE|TRNA-SPLICING endonuclease|Aeropyrum pernix (strain ATCC 700893

Query: 2 DFENPFKL 9
DFE P +L
Sbjct: 49 DFEGPLRL 56


>sp|GGGPS_PYRNV|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 ENPFKLG 10
ENP KLG
Sbjct: 224 ENPEKLG 230


>sp|PGK2_METVS|2-PHOSPHOGLYCERATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EDFENPFKLG 10
+D+E PF G
Sbjct: 15 KDYEMPFSKG 24


>sp|SYH_PYRIL|HISTIDINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EDFENPF 7
E+FE PF
Sbjct: 408 EEFEKPF 414


>sp|RL10_METBU|LARGE ribosomal subunit protein uL10|Methanococcoides burtonii (strain

Query: 4 ENPFKL 9
+NPFKL
Sbjct: 94 QNPFKL 99


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 DFENPFKLG 10
+FE+P KL
Sbjct: 115 EFEDPLKLA 123


>sp|DGGGP_PYRHO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EDFENPFKLG 10
EDFE +LG
Sbjct: 177 EDFEGDKRLG 186


>sp|RL10_IGNH4|LARGE ribosomal subunit protein uL10|Ignicoccus hospitalis (strain KIN4/I

Query: 4 ENPFKLG 10
+NPFKL
Sbjct: 102 DNPFKLA 108


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DFENPFKLG 10
D+EN K+G
Sbjct: 5 DYENALKVG 13


>sp|Y626_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB06260|Pyrococcus abyssi (strain GE5 /

Query: 2 DFENPFK 8
+FENP K
Sbjct: 75 EFENPIK 81




417|SequenceR|2090|2081|GQIELEDFEN

>sp|PDAD_PICTO|PYRUVOYL-DEPENDENT arginine decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 GQIELEDFEN 10
G+ EL+ FEN
Sbjct: 18 GRTELQSFEN 27


>sp|HEM1_AERPE|GLUTAMYL-TRNA reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GQIELEDFE 9
GQ+ LED E
Sbjct: 386 GQLSLEDIE 394


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 2 QIELEDFE 9
++ELEDFE
Sbjct: 614 KVELEDFE 621


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 GQIELEDFEN 10
G I+LED E+
Sbjct: 200 GFIDLEDLES 209


>sp|Y1183_METJA|UNCHARACTERIZED protein MJ1183|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IELEDFEN 10
+++EDFEN
Sbjct: 81 MQMEDFEN 88


>sp|Y1120_ARCFU|UNCHARACTERIZED protein AF_1120|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GQIELEDFE 9
G+I EDFE
Sbjct: 116 GKIMTEDFE 124


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QIELEDF 8
QIE EDF
Sbjct: 605 QIEYEDF 611


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 ELEDFE 9
ELEDFE
Sbjct: 89 ELEDFE 94


>sp|Y1021_METJA|UNCHARACTERIZED protein MJ1021|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LEDFEN 10
LEDFEN
Sbjct: 44 LEDFEN 49


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 GQIELEDFE 9
GQ++LED +
Sbjct: 191 GQVDLEDLK 199




418|SequenceR|2095|2086|PDPLKGQIEL

>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PDPLKGQ 7
PDP+KG+
Sbjct: 559 PDPVKGE 565


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PDPLKGQIEL 10
PDP+K +EL
Sbjct: 104 PDPVKRVVEL 113


>sp|PSB_METAR|PROTEASOME subunit beta|Methanocella arvoryzae (strain DSM 22066

Query: 2 DPLKGQIE 9
DPL G+IE
Sbjct: 124 DPLGGRIE 131


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 DPLKGQI 8
DP+KGQ+
Sbjct: 193 DPMKGQV 199


>sp|PIMT_METTH|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 PDPLKGQIEL 10
PDPL Q+E+
Sbjct: 158 PDPLMKQLEI 167


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DPLKGQIEL 10
DP KGQ+ L
Sbjct: 198 DPAKGQVAL 206


>sp|PURP_META3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus aeolicus (strain ATCC

Query: 3 PLKGQIEL 10
PLK Q+EL
Sbjct: 215 PLKNQVEL 222


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PDPLKGQIE 9
PD L+GQ E
Sbjct: 362 PDSLEGQCE 370


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 2 DPLKGQIEL 10
DPL+G ++L
Sbjct: 287 DPLRGSLKL 295


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PDPLKGQIE 9
PDP+ QIE
Sbjct: 204 PDPIIEQIE 212


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 PLKGQIE 9
P+KGQ+E
Sbjct: 424 PVKGQVE 430


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 PDPLKGQIEL 10
P+P KGQ+ L
Sbjct: 22 PNPNKGQVLL 31


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 DPLKGQIEL 10
DPLKG EL
Sbjct: 695 DPLKGVKEL 703


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 2 DPLKGQIE 9
DP+KG+I+
Sbjct: 244 DPVKGEIK 251


>sp|IF2A_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 2 DPLKGQIEL 10
DP KG I+L
Sbjct: 72 DPKKGHIDL 80


>sp|IF2A_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 DPLKGQIEL 10
DP KG I+L
Sbjct: 72 DPRKGHIDL 80


>sp|PURP_METM7|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C7 /

Query: 3 PLKGQIEL 10
PLK Q+EL
Sbjct: 215 PLKDQVEL 222


>sp|PURP_METMP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain DSM

Query: 3 PLKGQIEL 10
PLK Q+EL
Sbjct: 215 PLKDQVEL 222


>sp|PURP_METM5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C5 /

Query: 3 PLKGQIEL 10
PLK Q+EL
Sbjct: 215 PLKDQVEL 222


>sp|PURP_METM6|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C6 /

Query: 3 PLKGQIEL 10
PLK Q+EL
Sbjct: 215 PLKDQVEL 222


>sp|IF2A_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 DPLKGQIEL 10
DP KG I+L
Sbjct: 72 DPRKGHIDL 80


>sp|IF2A_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain

Query: 2 DPLKGQIEL 10
DP KG I+L
Sbjct: 72 DPEKGHIDL 80


>sp|IF2A_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 2 DPLKGQIEL 10
DP KG I+L
Sbjct: 72 DPEKGHIDL 80


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 2 DPLKGQ 7
DP+KGQ
Sbjct: 192 DPMKGQ 197


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 2 DPLKGQI 8
DP KGQ+
Sbjct: 193 DPAKGQV 199


>sp|IF2A_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 2 DPLKGQIEL 10
DP KG I+L
Sbjct: 72 DPNKGHIDL 80


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 PDPLKGQIE 9
P PL+ Q+E
Sbjct: 202 PGPLREQVE 210




419|SequenceR|2100|2091|GYEKVPDPLK

>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 GYEKVPDPLK 10
GYE+VP+ L+
Sbjct: 1219 GYERVPEELE 1228


>sp|Y952_PYRAE|UPF0215 protein PAE0952|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GYEKVPDPLK 10
G+ K+P+PL+
Sbjct: 155 GFGKIPEPLR 164


>sp|PCNA3_AERPE|DNA polymerase sliding clamp 3|Aeropyrum pernix (strain ATCC 700893

Query: 2 YEKVPDP 8
YEK+P+P
Sbjct: 121 YEKLPEP 127


>sp|QUEE_METAC|7-CARBOXY-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YEKVPDPL 9
+EK+P+P+
Sbjct: 65 FEKIPNPI 72


>sp|Y1363_METJA|UNCHARACTERIZED protein MJ1363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YEKVPDP 8
YEK+P+P
Sbjct: 77 YEKIPEP 83


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYEKVPDPLK 10
GYEKVP ++
Sbjct: 701 GYEKVPRDMQ 710


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GYEKVPDPLK 10
G+EKVP L+
Sbjct: 702 GFEKVPTELQ 711


>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 2 YEKVPDPL 9
YEK+PD +
Sbjct: 63 YEKIPDEI 70


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 GYEKVPDPLK 10
G+E+VP+ L+
Sbjct: 702 GFERVPNELQ 711


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 1 GYEKVPDPLK 10
GY +VPD L+
Sbjct: 339 GYGEVPDALQ 348


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GYEKVPDPLK 10
GY+KVP L+
Sbjct: 697 GYQKVPPELQ 706


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GYEKVPDPLK 10
GY+KVP L+
Sbjct: 697 GYQKVPPELQ 706


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 GYEKVPDPLK 10
G+EKVP L+
Sbjct: 702 GFEKVPGELQ 711


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YEKVPDPLK 10
+EKVP P++
Sbjct: 202 WEKVPHPIR 210


>sp|RPIA_METB6|RIBOSE-5-PHOSPHATE isomerase A|Methanoregula boonei (strain DSM 21154

Query: 2 YEKVPDP 8
+E++PDP
Sbjct: 185 FEEIPDP 191


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 EKVPDP 8
+KVPDP
Sbjct: 486 QKVPDP 491


>sp|LYSZ_IGNH4|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Ignicoccus hospitalis

Query: 5 VPDPLK 10
VPDPLK
Sbjct: 247 VPDPLK 252


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 3 EKVPDPLK 10
EKVP+P++
Sbjct: 807 EKVPEPME 814


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YEKVPD 7
YE+VPD
Sbjct: 524 YERVPD 529


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 2 YEKVPDPL 9
YE++ DPL
Sbjct: 395 YEEISDPL 402


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 2 YEKVPDPLK 10
YEK+P+ L+
Sbjct: 86 YEKIPEQLQ 94


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 VPDPLK 10
VPDP+K
Sbjct: 185 VPDPIK 190


>sp|MBHJ_PYRFU|PROBABLE membrane-bound hydrogenase subunit mbhJ|Pyrococcus furiosus

Query: 2 YEKVPDP 8
YE+ PDP
Sbjct: 87 YEQTPDP 93


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 3 EKVPDPLK 10
E+V DPLK
Sbjct: 410 ERVDDPLK 417


>sp|PYRB_METHJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanospirillum hungatei

Query: 3 EKVPDPLK 10
E+ PDP K
Sbjct: 225 ERFPDPAK 232


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 3 EKVPDP 8
E++PDP
Sbjct: 233 ERIPDP 238


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 VPDPLK 10
VPDP+K
Sbjct: 185 VPDPIK 190


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GYEKVPDPL 9
G+E VPD L
Sbjct: 705 GWEPVPDQL 713


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 GYEKVPDPLK 10
G+E+VP+ ++
Sbjct: 702 GFERVPNEIQ 711


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 KVPDPLK 10
KVP+PL+
Sbjct: 357 KVPEPLR 363


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 VPDPLK 10
+PDPLK
Sbjct: 379 IPDPLK 384


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GYEKVPD 7
GYEK P+
Sbjct: 13 GYEKAPN 19


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 5 VPDPLK 10
VPDP+K
Sbjct: 185 VPDPIK 190


>sp|SYK2_METMA|LYSINE--TRNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GYEKVPDPLK 10
GY ++ DPL+
Sbjct: 432 GYSELNDPLE 441


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GYEKVPD 7
GYEK P+
Sbjct: 15 GYEKAPN 21


>sp|RL10_ARCFU|LARGE ribosomal subunit protein uL10|Archaeoglobus fulgidus (strain ATCC

Query: 4 KVPDPLK 10
KVP PLK
Sbjct: 105 KVPSPLK 111


>sp|Y516_METJA|UNCHARACTERIZED protein MJ0516|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YEKVPDP 8
YEK P+P
Sbjct: 73 YEKTPEP 79


>sp|SYDND_METMA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GYEKVPDPL 9
GYE +PD +
Sbjct: 93 GYELLPDEI 101


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EKVPDPLK 10
E +P+PLK
Sbjct: 377 EAIPEPLK 384


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GYEKVPDPLK 10
GY ++ DPL+
Sbjct: 432 GYSELNDPLE 441


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 3 EKVPDPL 9
+K+PDP+
Sbjct: 102 DKLPDPI 108




420|SequenceR|2105|2096|PWPACGYEKV

>sp|SRP19_METM7|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C7

Query: 1 PWPACGYEKV 10
PW CGY KV
Sbjct: 60 PWEICGYIKV 69


>sp|SRP19_METVS|SIGNAL recognition particle 19 kDa|Methanococcus vannielii (strain ATCC

Query: 1 PWPACGYEKV 10
PW CGY KV
Sbjct: 60 PWEICGYLKV 69


>sp|SRP19_METM6|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C6

Query: 1 PWPACGYEKV 10
PW CGY KV
Sbjct: 60 PWEICGYIKV 69


>sp|SRP19_METM5|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C5

Query: 1 PWPACGYEKV 10
PW CGY KV
Sbjct: 60 PWEICGYIKV 69


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 PACGYEKV 10
P CGYE +
Sbjct: 326 PECGYENI 333


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 PACGYEK 9
P CGYEK
Sbjct: 144 PYCGYEK 150


>sp|Y157_METAC|UPF0251 protein MA_0157|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PACGYE 8
PACGYE
Sbjct: 135 PACGYE 140


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 PACGYEK 9
P CGYE+
Sbjct: 142 PYCGYER 148


>sp|HCGF_META3|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus aeolicus (strain

Query: 1 PWPACGYE 8
P P C YE
Sbjct: 65 PLPKCDYE 72


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PACGYEK 9
P CGYEK
Sbjct: 144 PYCGYEK 150


>sp|Y2663_HALWD|UPF0212 protein HQ_2663A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PWPACG 6
P PACG
Sbjct: 51 PCPACG 56


>sp|HCGF_METM7|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 4 ACGYEKV 10
ACGY++V
Sbjct: 23 ACGYKEV 29


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PWPACGYEK 9
P+PA YEK
Sbjct: 370 PYPADQYEK 378


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 1 PWPACGYEKV 10
P CGYE +
Sbjct: 265 PGKDCGYENI 274


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PACGYEK 9
P CGY+K
Sbjct: 146 PYCGYKK 152


>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 WPACG 6
WP CG
Sbjct: 50 WPICG 54


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PACGYEK 9
P CGYE+
Sbjct: 144 PYCGYER 150


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PACGYEK 9
P CGYE+
Sbjct: 144 PYCGYER 150


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PACGYEK 9
P CGYE+
Sbjct: 144 PYCGYER 150


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PACGYEK 9
P CGYE+
Sbjct: 144 PYCGYER 150


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PACGYEK 9
P CGYE+
Sbjct: 144 PYCGYER 150


>sp|COXX1_NATPD|PROTOHEME IX farnesyltransferase 1|Natronomonas pharaonis (strain ATCC

Query: 2 WPACG 6
WP CG
Sbjct: 39 WPLCG 43


>sp|AROK_METMA|SHIKIMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WPACGYE 8
W +CG E
Sbjct: 265 WESCGME 271


>sp|AROK_METAC|SHIKIMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WPACGYE 8
W +CG E
Sbjct: 265 WESCGME 271


>sp|T2M2_METJA|TYPE II restriction enzyme MjaII|Methanocaldococcus jannaschii (strain

Query: 1 PWPACGYEK 9
P CGY+K
Sbjct: 211 PENPCGYDK 219


>sp|Y1448_METMA|UPF0251 protein MM_1448|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 ACGYE 8
ACGYE
Sbjct: 136 ACGYE 140


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 PACGYEK 9
P CG+EK
Sbjct: 144 PYCGFEK 150


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 4 ACGYEKV 10
ACGY+ V
Sbjct: 159 ACGYKNV 165


>sp|NURA_SULAC|DNA double-strand break repair nuclease|Sulfolobus acidocaldarius

Query: 5 CGYEKV 10
CGY K+
Sbjct: 224 CGYSKI 229


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 ACGYEKV 10
+CGYE V
Sbjct: 478 SCGYEHV 484


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PWPACGYE 8
PW GYE
Sbjct: 191 PWGIDGYE 198




421|SequenceR|2110|2101|LKEVMPWPAC

>sp|SYK_SULAC|LYSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LKEVMPWP 8
+KE++P+P
Sbjct: 483 IKEIIPYP 490


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LKEVMPWP 8
+KEV+P+P
Sbjct: 476 IKEVIPFP 483


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKEVMPWPA 9
LKE+M W A
Sbjct: 181 LKELMGWSA 189


>sp|RS8_DESA1|SMALL ribosomal subunit protein uS8|Desulfurococcus amylolyticus

Query: 2 KEVMPWPA 9
KEV+ WPA
Sbjct: 23 KEVVVWPA 30


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 LKEVMPWP 8
+KEV P+P
Sbjct: 469 MKEVKPYP 476


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 1 LKEVMPWPA 9
LKE MP P+
Sbjct: 718 LKEQMPTPS 726


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LKEVMPWP 8
+KEV+P+P
Sbjct: 414 VKEVVPFP 421


>sp|SRP19_METMP|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain

Query: 1 LKEVMPWPA 9
+KE++ WPA
Sbjct: 1 MKEIILWPA 9


>sp|SRP19_METVS|SIGNAL recognition particle 19 kDa|Methanococcus vannielii (strain

Query: 1 LKEVMPWPA 9
+KE++ WPA
Sbjct: 1 MKEIVIWPA 9


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LKEVMPWP 8
+KE++P+P
Sbjct: 414 VKEIVPFP 421


>sp|NADA_METKA|QUINOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 KEVMPWP 8
KEV+P+P
Sbjct: 147 KEVIPFP 153


>sp|SRP19_METM7|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain

Query: 1 LKEVMPWPA 9
+KE++ WPA
Sbjct: 1 MKEMIIWPA 9


>sp|SRP19_METM5|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain

Query: 1 LKEVMPWPA 9
+KE++ WPA
Sbjct: 1 MKEMIIWPA 9




422|SequenceR|2115|2106|LCQKILKEVM

>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 3 QKILKEVM 10
QKI+KE+M
Sbjct: 377 QKIVKELM 384


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 LCQKILKE 8
+C+K++KE
Sbjct: 1690 ICEKMVKE 1697


>sp|RPO11_METM6|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain C6

Query: 1 LCQKILKEV 9
LC K LKE+
Sbjct: 88 LCNKTLKEL 96


>sp|RPO11_METM7|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain C7

Query: 1 LCQKILKEV 9
LC K LKE+
Sbjct: 88 LCNKTLKEL 96


>sp|RPO11_METM5|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain C5

Query: 1 LCQKILKEV 9
LC K LKE+
Sbjct: 88 LCNKTLKEL 96


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LCQKILKE 8
LC K LKE
Sbjct: 102 LCDKCLKE 109




423|SequenceR|2120|2111|QPNEKLCQKI

>sp|KORB_METTH|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter thermautotrophicus

Query: 1 QPNEKLCQKI 10
+P +LC+KI
Sbjct: 255 RPQPELCEKI 264


>sp|Y1001_ARCFU|UNCHARACTERIZED protein AF_1001|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QPNEKLCQ 8
QP+ K+CQ
Sbjct: 182 QPDGKVCQ 189


>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 2 PNEKLCQKI 10
PN LC+K+
Sbjct: 167 PNRILCEKV 175


>sp|Y339_METJA|UNCHARACTERIZED protein MJ0339|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PNEKLCQKI 10
PNE L +KI
Sbjct: 70 PNEDLVEKI 78


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EKLCQK 9
E+LCQK
Sbjct: 183 ERLCQK 188


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 2 PNEKLCQK 9
PN LC+K
Sbjct: 168 PNRILCEK 175


>sp|THII_SACS2|PROBABLE tRNA sulfurtransferase|Saccharolobus solfataricus (strain ATCC

Query: 4 EKLCQK 9
EKLC+K
Sbjct: 262 EKLCEK 267




424|SequenceR|2125|2116|STPREQPNEK

>sp|PYRH_METBU|URIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 STPREQPNEK 10
S PRE PN K
Sbjct: 147 SDPREDPNAK 156


>sp|PYRH_THEON|URIDYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 STPREQPNEK 10
S PR+ PN K
Sbjct: 148 SDPRKNPNAK 157


>sp|FWDC_METWO|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 TPREQP 7
TP+EQP
Sbjct: 7 TPKEQP 12


>sp|FWDC_METTM|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 TPREQP 7
TP+EQP
Sbjct: 7 TPKEQP 12


>sp|FWDC_METTH|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 TPREQP 7
TP+EQP
Sbjct: 7 TPKEQP 12


>sp|TRPF_HALVD|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Haloferax volcanii (strain ATCC 29605

Query: 2 TPREQPNEK 10
TPRE P E+
Sbjct: 36 TPREIPRER 44


>sp|PYRH_PYRAB|URIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 PREQPNEK 10
PR+ PN K
Sbjct: 150 PRKNPNAK 157


>sp|PYRH_THEGJ|URIDYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 STPREQPNEK 10
S PR+ PN +
Sbjct: 148 SDPRKNPNAR 157


>sp|IF1A_META3|TRANSLATION initiation factor 1A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TPREQPNE 9
TPRE+ NE
Sbjct: 16 TPREENNE 23


>sp|HISX_SACS2|HISTIDINOL dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 STPREQPNE 9
S P E+PN+
Sbjct: 5 SLPNERPND 13




425|SequenceR|2130|2121|DFVQASTPRE

>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 DFVQASTPR 9
DF+Q +TP+
Sbjct: 864 DFMQKNTPK 872




426|SequenceR|2135|2126|ASNLIDFVQA

>sp|Y1511_METMJ|UPF0316 protein Memar_1511|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ASNLIDFVQA 10
A+NLID+++A
Sbjct: 112 ATNLIDYLRA 121


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 SNLIDFVQ 9
S +IDFVQ
Sbjct: 118 SEIIDFVQ 125




427|SequenceR|2140|2131|LCVLEASNLI

>sp|Y2090_METMA|UPF0251 protein MM_2090|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LCVLEASNL 9
LC LE +NL
Sbjct: 25 LCCLETANL 33


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 2 CVLEASNL 9
C+L A+NL
Sbjct: 96 CILTATNL 103


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CVLEASNLI 10
C LE NLI
Sbjct: 860 CSLEVGNLI 868




428|SequenceR|2145|2136|LIRRTLCVLE

>sp|RL30_METKA|LARGE ribosomal subunit protein uL30|Methanopyrus kandleri (strain AV19

Query: 1 LIRRTLCVL 9
L+RR CVL
Sbjct: 20 LLRRNWCVL 28


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 2 IRRTLCVLE 10
+ T+CVLE
Sbjct: 168 VEETVCVLE 176


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 1 LIRRTLCVL 9
L ++TLCVL
Sbjct: 27 LKKKTLCVL 35




429|SequenceR|2150|2141|VNKPLLIRRT

>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNKPLLIRRT 10
+NKP+L RRT
Sbjct: 142 INKPMLARRT 151


>sp|PYRE_PYRHO|OROTATE phosphoribosyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 2 NKPLLIRR 9
NKPLLI R
Sbjct: 86 NKPLLIVR 93


>sp|PYRE_PYRAY|OROTATE phosphoribosyltransferase|Pyrococcus abyssi

Query: 2 NKPLLIRR 9
NKPLLI R
Sbjct: 84 NKPLLIIR 91


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNKPLLI 7
VNKPL I
Sbjct: 76 VNKPLFI 82


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 NKPLLIRR 9
NKPL +RR
Sbjct: 361 NKPLPLRR 368


>sp|Y1505_AERPE|UPF0273 protein APE_1505.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 KPLLIRRT 10
KP+L RRT
Sbjct: 144 KPVLARRT 151


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 NKPLLIR 8
NKP+L+R
Sbjct: 121 NKPVLVR 127


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VNKPLLI 7
VNKP+L+
Sbjct: 418 VNKPVLV 424


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VNKPLLI 7
VNKP+L+
Sbjct: 418 VNKPVLV 424


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VNKPLLI 7
VNKP+L+
Sbjct: 417 VNKPVLV 423




430|SequenceR|2155|2146|MCEVIVNKPL

>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MCEVIVNKPL 10
+CE IVNK L
Sbjct: 318 VCEAIVNKKL 327


>sp|LEUD_PYRAE|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 EVIVNKPL 10
EVIV KPL
Sbjct: 133 EVIVGKPL 140


>sp|RS3_METS5|SMALL ribosomal subunit protein uS3|Metallosphaera sedula (strain ATCC

Query: 3 EVIVNKPL 10
EV++ KPL
Sbjct: 180 EVVITKPL 187


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MCEVIVNKPL 10
MC +I+N L
Sbjct: 373 MCPIIINNVL 382


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 CEVIVNKPL 10
CE ++++PL
Sbjct: 69 CEPVLDRPL 77


>sp|RS3_SACS2|SMALL ribosomal subunit protein uS3|Saccharolobus solfataricus (strain

Query: 3 EVIVNKPL 10
EV++ KPL
Sbjct: 180 EVVITKPL 187


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 CEVIVN 7
CEVIVN
Sbjct: 929 CEVIVN 934


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 CEVIVN 7
CEVIVN
Sbjct: 929 CEVIVN 934


>sp|RL31_THEAC|LARGE ribosomal subunit protein eL31|Thermoplasma acidophilum (strain

Query: 3 EVIVNKPL 10
EVI+N PL
Sbjct: 9 EVIINVPL 16




431|SequenceR|2160|2151|HHTAVMCEVI

>sp|PIMT2_ARCFU|PROTEIN-L-ISOASPARTATE O-methyltransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HHTAVMCEVI 10
H A+MCE++
Sbjct: 63 HMVAIMCELL 72


>sp|PIMT1_ARCFU|PROTEIN-L-ISOASPARTATE O-methyltransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HHTAVMCEVI 10
H A+MCE++
Sbjct: 63 HMVAIMCELL 72


>sp|PIMT_HYPBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 HHTAVMCEVI 10
+H AVM EV+
Sbjct: 98 YHAAVMAEVV 107


>sp|PIMT1_METAC|PROTEIN-L-ISOASPARTATE O-methyltransferase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HHTAVMCEVI 10
H A+MC+++
Sbjct: 101 HMVAIMCDLL 110


>sp|PIMT_METBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HHTAVMCEVI 10
H A+MC+++
Sbjct: 53 HMVAIMCDLL 62


>sp|KAE1B_METMJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 HHTAVMCEVI 10
HH + M EV+
Sbjct: 53 HHASAMKEVV 62


>sp|Y630_METJA|PUTATIVE phosphate permease MJ0630|Methanocaldococcus jannaschii (strain

Query: 2 HTAVMCEVI 10
HT ++C +I
Sbjct: 98 HTVIICSLI 106


>sp|KAE1_HYPBU|TRNA N6-adenosine threonylcarbamoyltransferase|Hyperthermus butylicus

Query: 1 HHTAVMCEVI 10
HH V EVI
Sbjct: 77 HHARVASEVI 86


>sp|PIMT_METVS|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 HHTAVMCEVI 10
+H AV+ E+I
Sbjct: 89 YHAAVVLEII 98


>sp|PIMT_META3|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HHTAVMCEVI 10
+H AV+ E++
Sbjct: 89 YHAAVVAEIV 98




432|SequenceR|2165|2156|ANRSNHHTAV

>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 3 RSNHHTAV 10
RSN HT V
Sbjct: 247 RSNQHTGV 254


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NRSNHH 7
+RSNHH
Sbjct: 114 DRSNHH 119


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter

Query: 4 SNHHTA 9
+NHHTA
Sbjct: 18 NNHHTA 23


>sp|MFNA_META3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus aeolicus (strain

Query: 1 ANRSNHHTAV 10
A R NH T V
Sbjct: 103 AKRKNHKTTV 112


>sp|NEP1_PYRAR|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum arsenaticum

Query: 2 NRSNHHTAV 10
+RS HH A+
Sbjct: 40 DRSRHHPAM 48


>sp|NEP1_ARCFU|RIBOSOMAL RNA small subunit methyltransferase|Archaeoglobus fulgidus

Query: 4 SNHHTAV 10
S HHTA+
Sbjct: 44 SKHHTAM 50


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 3 RSNHHTAV 10
RS HH A+
Sbjct: 351 RSGHHCAI 358




433|SequenceR|2170|2161|GLWISANRSN

>sp|Y292_METJA|UNCHARACTERIZED protein MJ0292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LWISANRSN 10
LWI +R N
Sbjct: 31 LWIEKDRKN 39




434|SequenceR|2175|2166|DTHGCGLWIS

>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 3 HGCGLWIS 10
HG G W+S
Sbjct: 404 HGAGRWMS 411


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 1 DTHGCGLW 8
D+ G GLW
Sbjct: 485 DSQGMGLW 492


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 DTHGCGLW 8
D+ G GLW
Sbjct: 485 DSQGMGLW 492


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus jannaschii

Query: 3 HGCGL 7
HGCGL
Sbjct: 110 HGCGL 114


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 THGCGLWI 9
+ GCG W+
Sbjct: 792 SEGCGEWL 799


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 4 GCGLWIS 10
GC +W++
Sbjct: 385 GCAIWVA 391


>sp|NOP10_HALMA|RIBOSOME biogenesis protein Nop10|Haloarcula marismortui (strain ATCC

Query: 1 DTHGCGLWIS 10
D H C +W S
Sbjct: 4 DIHVCAVWES 13


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 5 CGLWI 9
CGLW+
Sbjct: 328 CGLWM 332


>sp|RS5_METMJ|SMALL ribosomal subunit protein uS5|Methanoculleus marisnigri (strain

Query: 2 THGCGLW 8
+ GCG W
Sbjct: 113 SRGCGSW 119


>sp|RS5_HALMA|SMALL ribosomal subunit protein uS5|Haloarcula marismortui (strain ATCC

Query: 2 THGCGLW 8
+ GCG W
Sbjct: 112 SRGCGSW 118


>sp|PYRH_METMA|URIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 CGLWIS 10
CG WI+
Sbjct: 225 CGTWIT 230


>sp|PYRH_METBF|URIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 5 CGLWIS 10
CG WI+
Sbjct: 225 CGTWIT 230


>sp|PYRH_METAC|URIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 CGLWIS 10
CG WI+
Sbjct: 225 CGTWIT 230


>sp|COFE_METMP|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 CGLW 8
CGLW
Sbjct: 176 CGLW 179


>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 5 CGLW 8
CGLW
Sbjct: 176 CGLW 179


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 5 CGLW 8
CGLW
Sbjct: 176 CGLW 179


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DTHGCGLW 8
+ HG G+W
Sbjct: 398 NKHGKGIW 405


>sp|HTPX_PYRHO|PROTEASE HtpX homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GCGLWI 9
G GLWI
Sbjct: 2 GLGLWI 7


>sp|HTPX_PYRAB|PROTEASE HtpX homolog|Pyrococcus abyssi (strain GE5 /

Query: 4 GCGLWI 9
G GLWI
Sbjct: 2 GLGLWI 7


>sp|RS5_HALSA|SMALL ribosomal subunit protein uS5|Halobacterium salinarum (strain ATCC

Query: 2 THGCGLW 8
+ GCG W
Sbjct: 112 SRGCGSW 118


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 4 GCGLW 8
GCG W
Sbjct: 126 GCGSW 130


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 4 GCGLW 8
GCG W
Sbjct: 120 GCGSW 124


>sp|RS5_SULAC|SMALL ribosomal subunit protein uS5|Sulfolobus acidocaldarius (strain

Query: 4 GCGLW 8
GCG W
Sbjct: 120 GCGSW 124


>sp|RS5_STAMF|SMALL ribosomal subunit protein uS5|Staphylothermus marinus (strain ATCC

Query: 4 GCGLW 8
GCG W
Sbjct: 121 GCGSW 125


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 4 GCGLW 8
GCG W
Sbjct: 120 GCGSW 124


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 4 GCGLW 8
GCG W
Sbjct: 120 GCGSW 124


>sp|RS5_PYRIL|SMALL ribosomal subunit protein uS5|Pyrobaculum islandicum (strain DSM

Query: 4 GCGLW 8
GCG W
Sbjct: 116 GCGSW 120


>sp|RS5_PYRHO|SMALL ribosomal subunit protein uS5|Pyrococcus horikoshii (strain ATCC

Query: 4 GCGLW 8
GCG W
Sbjct: 127 GCGSW 131


>sp|RS5_PYRFU|SMALL ribosomal subunit protein uS5|Pyrococcus furiosus (strain ATCC

Query: 4 GCGLW 8
GCG W
Sbjct: 127 GCGSW 131


>sp|RS5_PYRCJ|SMALL ribosomal subunit protein uS5|Pyrobaculum calidifontis (strain DSM

Query: 4 GCGLW 8
GCG W
Sbjct: 116 GCGSW 120


>sp|RS5_PYRAR|SMALL ribosomal subunit protein uS5|Pyrobaculum arsenaticum (strain DSM

Query: 4 GCGLW 8
GCG W
Sbjct: 116 GCGSW 120


>sp|RS5_PYRAE|SMALL ribosomal subunit protein uS5|Pyrobaculum aerophilum (strain ATCC

Query: 4 GCGLW 8
GCG W
Sbjct: 132 GCGSW 136


>sp|RS5_PYRAB|SMALL ribosomal subunit protein uS5|Pyrococcus abyssi (strain GE5 /

Query: 4 GCGLW 8
GCG W
Sbjct: 127 GCGSW 131


>sp|RS5_PICTO|SMALL ribosomal subunit protein uS5|Picrophilus torridus (strain ATCC

Query: 4 GCGLW 8
GCG W
Sbjct: 112 GCGSW 116


>sp|RS5_NANEQ|SMALL ribosomal subunit protein uS5|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 GCGLW 8
GCG W
Sbjct: 127 GCGSW 131


>sp|RS5_METVS|SMALL ribosomal subunit protein uS5|Methanococcus vannielii (strain ATCC

Query: 4 GCGLW 8
GCG W
Sbjct: 123 GCGSW 127


>sp|RS5_METVA|SMALL ribosomal subunit protein uS5|Methanococcus vannielii

Query: 4 GCGLW 8
GCG W
Sbjct: 123 GCGSW 127


>sp|RS5_METS5|SMALL ribosomal subunit protein uS5|Metallosphaera sedula (strain ATCC

Query: 4 GCGLW 8
GCG W
Sbjct: 120 GCGSW 124


>sp|RS5_METMP|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain DSM

Query: 4 GCGLW 8
GCG W
Sbjct: 123 GCGSW 127


>sp|RS5_METMA|SMALL ribosomal subunit protein uS5|Methanosarcina mazei (strain ATCC

Query: 4 GCGLW 8
GCG W
Sbjct: 114 GCGSW 118


>sp|RS5_METM7|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C7

Query: 4 GCGLW 8
GCG W
Sbjct: 127 GCGSW 131


>sp|RS5_METM6|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C6

Query: 4 GCGLW 8
GCG W
Sbjct: 127 GCGSW 131


>sp|RS5_METM5|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C5

Query: 4 GCGLW 8
GCG W
Sbjct: 127 GCGSW 131


>sp|RS5_METJA|SMALL ribosomal subunit protein uS5|Methanocaldococcus jannaschii (strain

Query: 4 GCGLW 8
GCG W
Sbjct: 115 GCGSW 119


>sp|RS5_METBU|SMALL ribosomal subunit protein uS5|Methanococcoides burtonii (strain DSM

Query: 4 GCGLW 8
GCG W
Sbjct: 116 GCGSW 120


>sp|RS5_METBF|SMALL ribosomal subunit protein uS5|Methanosarcina barkeri (strain Fusaro

Query: 4 GCGLW 8
GCG W
Sbjct: 114 GCGSW 118


>sp|RS5_METB6|SMALL ribosomal subunit protein uS5|Methanoregula boonei (strain DSM

Query: 4 GCGLW 8
GCG W
Sbjct: 115 GCGSW 119


>sp|RS5_METAR|SMALL ribosomal subunit protein uS5|Methanocella arvoryzae (strain DSM

Query: 4 GCGLW 8
GCG W
Sbjct: 119 GCGSW 123


>sp|RS5_METAC|SMALL ribosomal subunit protein uS5|Methanosarcina acetivorans (strain

Query: 4 GCGLW 8
GCG W
Sbjct: 114 GCGSW 118


>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 4 GCGLW 8
GCG W
Sbjct: 120 GCGSW 124


>sp|RS5_CENSY|SMALL ribosomal subunit protein uS5|Cenarchaeum symbiosum (strain A)

Query: 4 GCGLW 8
GCG W
Sbjct: 134 GCGSW 138


>sp|RS5_AERPE|SMALL ribosomal subunit protein uS5|Aeropyrum pernix (strain ATCC 700893

Query: 4 GCGLW 8
GCG W
Sbjct: 121 GCGSW 125


>sp|RS5_ARCFU|SMALL ribosomal subunit protein uS5|Archaeoglobus fulgidus (strain ATCC

Query: 4 GCGLW 8
GCG W
Sbjct: 112 GCGSW 116


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 1 DTHGCG 6
DTHG G
Sbjct: 323 DTHGLG 328


>sp|RS5_THEVO|SMALL ribosomal subunit protein uS5|Thermoplasma volcanium (strain ATCC

Query: 4 GCGLW 8
GCG W
Sbjct: 112 GCGSW 116


>sp|RS5_THEPD|SMALL ribosomal subunit protein uS5|Thermofilum pendens (strain DSM 2475

Query: 4 GCGLW 8
GCG W
Sbjct: 112 GCGSW 116


>sp|RS5_IGNH4|SMALL ribosomal subunit protein uS5|Ignicoccus hospitalis (strain KIN4/I

Query: 4 GCGLW 8
GCG W
Sbjct: 117 GCGSW 121


>sp|RS5_METHJ|SMALL ribosomal subunit protein uS5|Methanospirillum hungatei JF-1

Query: 4 GCGLW 8
GCG W
Sbjct: 115 GCGSW 119


>sp|RS5_THEAC|SMALL ribosomal subunit protein uS5|Thermoplasma acidophilum (strain ATCC

Query: 4 GCGLW 8
GCG W
Sbjct: 112 GCGSW 116


>sp|RS5_META3|SMALL ribosomal subunit protein uS5|Methanococcus aeolicus (strain ATCC

Query: 4 GCGLW 8
GCG W
Sbjct: 120 GCGSW 124


>sp|RS5_METLZ|SMALL ribosomal subunit protein uS5|Methanocorpusculum labreanum (strain

Query: 4 GCGLW 8
GCG W
Sbjct: 115 GCGSW 119


>sp|RS5_METTP|SMALL ribosomal subunit protein uS5|Methanothrix thermoacetophila (strain

Query: 4 GCGLW 8
GCG W
Sbjct: 117 GCGSW 121


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19 /

Query: 4 GCGLW 8
GCG W
Sbjct: 117 GCGSW 121




435|SequenceR|2180|2171|SLQGRDTHGC

>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LQGRDTHGC 10
+QG D GC
Sbjct: 686 IQGVDAEGC 694


>sp|FLAC_METJA|PUTATIVE flagella-related protein C|Methanocaldococcus jannaschii (strain

Query: 1 SLQGRDTH 8
S+ G DTH
Sbjct: 128 SMSGEDTH 135


>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei (strain

Query: 2 LQGRDTHGC 10
L G D+H C
Sbjct: 94 LVGADSHSC 102


>sp|FTSZ_THEAC|CELL division protein FtsZ|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GRDTHG 9
GRD HG
Sbjct: 371 GRDRHG 376


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GRDTHG 9
G DTHG
Sbjct: 56 GSDTHG 61


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 GRDTHG 9
G DTHG
Sbjct: 53 GSDTHG 58


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GRDTHG 9
G DTHG
Sbjct: 52 GSDTHG 57


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GRDTHG 9
G DTHG
Sbjct: 56 GSDTHG 61


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 LQGRDTHG 9
L+G D HG
Sbjct: 369 LKGADVHG 376




436|SequenceR|2185|2176|NLDLFSLQGR

>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 1 NLDLFSLQGR 10
+LDL L GR
Sbjct: 146 SLDLLELDGR 155




437|SequenceR|2190|2181|TYGETNLDLF

>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TYGETNLDL 9
+YGETN+D+
Sbjct: 305 SYGETNVDV 313


Query: 1 TYGETNLDLF 10
TYG+ LD+F
Sbjct: 264 TYGKPFLDVF 273


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 TYGETNLDL 9
+YGETN+D+
Sbjct: 305 SYGETNVDV 313


Query: 1 TYGETNLDLF 10
TYG+ LD+F
Sbjct: 264 TYGKPFLDVF 273


>sp|PYRDA_AERPE|PUTATIVE dihydroorotate dehydrogenase A (fumarate)|Aeropyrum pernix (strain

Query: 2 YGETNLDLF 10
YGET D+F
Sbjct: 233 YGETRADIF 241


>sp|SPEH_ARCFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YGETNLDLF 10
YG NLD+F
Sbjct: 72 YGLVNLDIF 80


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 TYGETNLDLF 10
+YGETN+++
Sbjct: 305 SYGETNVEVL 314


>sp|RS6E_METPE|SMALL ribosomal subunit protein eS6|Methanosphaerula palustris (strain

Query: 1 TYGETNLD 8
TYGE +LD
Sbjct: 114 TYGEKSLD 121


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 ETNLDLF 10
ETNL+LF
Sbjct: 215 ETNLELF 221


>sp|MCH_METVS|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TYGETNLDLF 10
T+G TN+D+
Sbjct: 305 THGNTNIDVL 314


>sp|HIS7_METS5|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 2 YGETNLDL 9
Y TNLDL
Sbjct: 115 YASTNLDL 122


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GETNLDL 9
GET+LDL
Sbjct: 66 GETDLDL 72


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GETNLDL 9
GET+LDL
Sbjct: 66 GETDLDL 72


>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 GETNLDL 9
GET+LDL
Sbjct: 66 GETDLDL 72


>sp|RL30_METS5|LARGE ribosomal subunit protein uL30|Metallosphaera sedula (strain ATCC

Query: 1 TYGETNLD 8
T+GE N+D
Sbjct: 55 TWGELNMD 62


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 3 GETNLDLF 10
G+TNLD F
Sbjct: 111 GKTNLDEF 118


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GETNLDL 9
GET+LDL
Sbjct: 65 GETDLDL 71


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 3 GETNLDLF 10
G+TNLD F
Sbjct: 119 GKTNLDEF 126


>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GETNLDL 9
GET+LDL
Sbjct: 65 GETDLDL 71


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TYGETNL 7
TYG TNL
Sbjct: 227 TYGVTNL 233


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TYGETNL 7
TYG TNL
Sbjct: 227 TYGVTNL 233


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YGETNLD 8
YG+ NLD
Sbjct: 942 YGDKNLD 948


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YGETNLD 8
YG+ NLD
Sbjct: 942 YGDKNLD 948


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YGETNLD 8
YG+ NLD
Sbjct: 942 YGDKNLD 948


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YGETNLD 8
YG+ NLD
Sbjct: 942 YGDKNLD 948


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YGETNLD 8
YG+ NLD
Sbjct: 942 YGDKNLD 948


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YGETNLD 8
YG+ NLD
Sbjct: 942 YGDKNLD 948


>sp|CCA_SULTO|CCA-ADDING enzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GETNLDLF 10
G+T++D+F
Sbjct: 51 GDTDIDIF 58


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 ETNLDLF 10
+TNLD+F
Sbjct: 121 QTNLDIF 127


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 ETNLDLF 10
+TNLD+F
Sbjct: 121 QTNLDIF 127


>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GETNLDLF 10
G+T++D+F
Sbjct: 51 GDTDIDIF 58




438|SequenceR|2195|2186|AVEESTYGET

>sp|CSG_METFV|CELL surface glycoprotein|Methanothermus fervidus (strain ATCC 43054

Query: 1 AVEESTYG 8
AV ESTYG
Sbjct: 286 AVSESTYG 293


>sp|CSG_METSC|CELL surface glycoprotein|Methanothermus sociabilis

Query: 1 AVEESTYG 8
AV ESTYG
Sbjct: 286 AVSESTYG 293


>sp|AATC_HALSA|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 700922

Query: 2 VEESTYGE 9
+++STYG+
Sbjct: 264 IQDSTYGD 271


>sp|AATC_HALS3|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 29341

Query: 2 VEESTYGE 9
+++STYG+
Sbjct: 264 IQDSTYGD 271




439|SequenceR|2200|2191|LIRSDAVEES

>sp|Y289_METJA|UNCHARACTERIZED protein MJ0289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIRSDAVE 8
L+RSDA+E
Sbjct: 81 LLRSDALE 88


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LIRSDAVEES 10
LI +DA+EE+
Sbjct: 318 LIVTDAIEEA 327


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 2 IRSDAVEES 10
IR+D VEE+
Sbjct: 299 IRADIVEEA 307


>sp|Y1314_ARCFU|UNCHARACTERIZED protein AF_1314|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIRSDAVEE 9
L+R D++EE
Sbjct: 42 LVRVDSIEE 50




440|SequenceR|2205|2196|VLALCLIRSD

>sp|MPTA_PYRFU|GTP cyclohydrolase MptA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LALCLIR 8
LALC+IR
Sbjct: 87 LALCIIR 93




441|SequenceR|2210|2201|EVPLHVLALC

>sp|TTUA_METJA|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EVPLHVLAL 9
EVPLHV+ L
Sbjct: 106 EVPLHVVNL 114


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PLHVLAL 9
PLH LAL
Sbjct: 317 PLHYLAL 323


>sp|DPHB_METMJ|DIPHTHINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PLHVLAL 9
PLH+LA+
Sbjct: 226 PLHILAV 232


>sp|RIBL_METAR|FAD synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 PLHVLALC 10
P HVL LC
Sbjct: 16 PGHVLYLC 23


>sp|MTRA_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanopyrus kandleri (strain AV19

Query: 1 EVPLHVLAL 9
E P+HV+ L
Sbjct: 24 EAPVHVVTL 32




442|SequenceR|2215|2206|IWSEKEVPLH

>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 WSEKEVPLH 10
W+EK P+H
Sbjct: 3 WAEKYRPMH 11


>sp|HIS5_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 1 IWSEKEVPL 9
+W KE PL
Sbjct: 114 VWQRKECPL 122


>sp|CMR4_SACS2|CRISPR system CMR subunit Cmr4|Saccharolobus solfataricus (strain ATCC

Query: 1 IWSEKEVPLH 10
+WSE+ VP++
Sbjct: 250 LWSEEYVPVN 259


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 2 WSEKEVPL 9
WSE+E PL
Sbjct: 237 WSEEEDPL 244


>sp|TRUA_METBF|TRNA pseudouridine synthase A|Methanosarcina barkeri (strain Fusaro /

Query: 1 IWSEKEVPL 9
+W+ EVPL
Sbjct: 90 VWAHAEVPL 98


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 IWSEKEV 7
IW E+EV
Sbjct: 352 IWDEREV 358


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IWSEKEVPLH 10
+ +E+E+P+H
Sbjct: 255 VLNEREIPVH 264


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EKEVPL 9
EKEVPL
Sbjct: 211 EKEVPL 216


>sp|RIO1_ARCFU|RIO-TYPE serine/threonine-protein kinase Rio1|Archaeoglobus fulgidus (strain

Query: 1 IWSEKE 6
IW+EKE
Sbjct: 115 IWTEKE 120


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IWSEKEVPL 9
+W+E ++PL
Sbjct: 624 VWAEGDLPL 632


>sp|FLAK_METVO|PREFLAGELLIN peptidase|Methanococcus voltae

Query: 1 IWSEKEVPL 9
+W+ E+PL
Sbjct: 200 VWATPELPL 208


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WSEKEVPL 9
W + EVPL
Sbjct: 334 WKKVEVPL 341


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IWSEKEV 7
IWSE+E+
Sbjct: 55 IWSEEEL 61


>sp|TCPA_THEAD|NAD(+) hydrolase TcpA|Theionarchaea archaeon (strain DG-70-1)

Query: 1 IWSEKEVPLH 10
+ + KEVP+H
Sbjct: 133 VRNHKEVPIH 142


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 2 WSEKE 6
WSEKE
Sbjct: 278 WSEKE 282


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 WSEKEVPLH 10
W+EK P H
Sbjct: 3 WAEKYRPRH 11


>sp|RL15_THEAC|LARGE ribosomal subunit protein uL15|Thermoplasma acidophilum (strain

Query: 1 IWSEKEVPLH 10
IW K PLH
Sbjct: 41 IWMVKYDPLH 50


>sp|TRUA_METMA|TRNA pseudouridine synthase A|Methanosarcina mazei (strain ATCC

Query: 1 IWSEKEVP 8
+W+ EVP
Sbjct: 90 VWAHAEVP 97


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 WSEKEV 7
W+EKE+
Sbjct: 163 WAEKEI 168


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 WSEKEV 7
WS+KE+
Sbjct: 53 WSDKEI 58


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 WSEKEVP 8
W E E+P
Sbjct: 129 WGEPEIP 135


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 1 IWSEKEVP 8
+W +E+P
Sbjct: 330 VWDPREIP 337




443|SequenceR|2220|2211|QTGSVIWSEK

>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 QTGSVIWSEK 10
+TG ++WS K
Sbjct: 437 KTGKILWSTK 446


>sp|SFSA_PYRNV|SUGAR fermentation stimulation protein homolog|Pyrobaculum neutrophilum

Query: 3 GSVIWSEK 10
GSVIW+ +
Sbjct: 52 GSVIWARR 59


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 2 TGSVIWSE 9
TGS +W E
Sbjct: 133 TGSAVWDE 140


>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 GSVIWSEK 10
GS++WS K
Sbjct: 74 GSILWSVK 81


>sp|AATC_PYRFU|A-TYPE ATP synthase subunit C|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QTGSVIW 7
+TGS+IW
Sbjct: 24 KTGSLIW 30


>sp|PDXT_PYRFU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrococcus furiosus (strain

Query: 3 GSVIWSEK 10
GSVIW ++
Sbjct: 31 GSVIWVKR 38


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 1 QTGSVIWS 8
Q GS++W+
Sbjct: 356 QIGSILWA 363


>sp|GLKA_PYRHO|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus horikoshii (strain ATCC

Query: 3 GSVIWSEK 10
GS++WS K
Sbjct: 78 GSILWSIK 85


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 1 QTGSVIWSE 9
+TGSV W E
Sbjct: 142 KTGSVDWGE 150


>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 1 QTGSVIWSE 9
+TGSV W E
Sbjct: 142 ETGSVDWEE 150


>sp|GLKA_THEKO|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus kodakarensis (strain ATCC

Query: 3 GSVIWS 8
GS++WS
Sbjct: 74 GSILWS 79


>sp|AATC_PYRHO|A-TYPE ATP synthase subunit C|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QTGSVIW 7
+TG +IW
Sbjct: 24 KTGQIIW 30


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 2 TGSVIWSE 9
TG+ +W E
Sbjct: 133 TGNAVWDE 140


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GSVIWS 8
GS++WS
Sbjct: 75 GSILWS 80




444|SequenceR|2225|2216|LLTGSQTGSV

>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LLTGSQTGS 9
++TGS+TGS
Sbjct: 178 IVTGSRTGS 186


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 1 LLTGSQTGS 9
++TGS+TGS
Sbjct: 178 IITGSRTGS 186


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLTGSQTGSV 10
LLT S TGS+
Sbjct: 53 LLTDSGTGSM 62




445|SequenceR|2230|2221|ETNIVLLTGS

>sp|MUTS2_PYRFU|DNA-BINDING protein MutS2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ETNIVLLTGS 10
E NIV+LTG+
Sbjct: 372 EANIVILTGA 381


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 1 ETNIVLLTGS 10
ET VLLTGS
Sbjct: 98 ETGGVLLTGS 107


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ETNIVLLTG 9
E N+VLL+G
Sbjct: 22 ERNVVLLSG 30


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ETNIVLLTG 9
E N+VLL+G
Sbjct: 22 ERNVVLLSG 30


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ETNIVLLTG 9
E N+VLL+G
Sbjct: 22 ERNVVLLSG 30


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 1 ETNIVLLTG 9
E N+VLL+G
Sbjct: 22 ERNVVLLSG 30


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ETNIVLLTG 9
E N+VLL+G
Sbjct: 21 ERNVVLLSG 29


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 1 ETNIVLLTG 9
E N VLLTG
Sbjct: 23 ERNAVLLTG 31


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ETNIVLLTG 9
E N+VL+TG
Sbjct: 44 EQNLVLVTG 52


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 ETNIVLLT 8
ETN +LLT
Sbjct: 127 ETNSILLT 134


>sp|DPHB_METBU|DIPHTHINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ETNIVLLTG 9
++N+V LTG
Sbjct: 75 DSNVVFLTG 83




446|SequenceR|2235|2226|RKKGDETNIV

>sp|RPO1C_METS5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Metallosphaera sedula (strain ATCC

Query: 1 RKKGDETNIV 10
RKKGDE I+
Sbjct: 240 RKKGDEYVII 249


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RKKGDETNI 9
RKKGDE +
Sbjct: 56 RKKGDEITV 64


>sp|Y733_METJA|UNCHARACTERIZED protein MJ0733|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKKGDETNIV 10
++KGDE I+
Sbjct: 37 KEKGDEVKII 46


>sp|Y1676_METJA|UNCHARACTERIZED protein MJ1676|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KKGDETNIV 10
K GDE NI+
Sbjct: 201 KNGDEVNIL 209


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus (strain

Query: 2 KKGDET 7
KKGDET
Sbjct: 240 KKGDET 245


>sp|MCRB_METBF|METHYL-COENZYME M reductase subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 3 KGDETNIV 10
+GD+TN++
Sbjct: 94 EGDDTNVI 101


>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 2 KKGDETNIV 10
K+GDE+ +V
Sbjct: 246 KRGDESAVV 254


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 1 RKKGDETNIV 10
R+KG+E I+
Sbjct: 412 RRKGEEMGII 421


>sp|MPTA_METMJ|GTP cyclohydrolase MptA|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KKGDETNIV 10
K+GDE+ +V
Sbjct: 236 KRGDESYVV 244




447|SequenceR|2240|2231|KELTHRKKGD

>sp|GUAAA_METAC|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina

Query: 2 ELTHRKKGD 10
E++H KKGD
Sbjct: 168 EVSHTKKGD 176


>sp|Y888_METJA|PROBABLE metallo-hydrolase MJ0888|Methanocaldococcus jannaschii (strain

Query: 1 KELTHRKKGD 10
KE+ H K GD
Sbjct: 80 KEVKHLKNGD 89


>sp|G1PDH_METB6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoregula boonei (strain DSM 21154

Query: 2 ELTHRKKGD 10
E+ HR KG+
Sbjct: 193 EMAHRIKGE 201


>sp|GUAAA_METMA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina mazei

Query: 2 ELTHRKKGD 10
E++H KKG+
Sbjct: 168 EVSHTKKGE 176


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 1 KELTHRKKGD 10
KE+T+R++G+
Sbjct: 36 KEITNREEGE 45


>sp|RL22_NANEQ|LARGE ribosomal subunit protein uL22|Nanoarchaeum equitans (strain

Query: 1 KELTHRKKGD 10
+++ HRKKG
Sbjct: 61 RDIPHRKKGQ 70


>sp|G1PDH_PYRAE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ELTHRKKGD 10
+L HR KG+
Sbjct: 172 QLAHRLKGE 180


>sp|Y380_METJA|UNCHARACTERIZED protein MJ0380|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HRKKGD 10
HRK+GD
Sbjct: 112 HRKRGD 117


>sp|G1PDH_PYRNV|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 ELTHRKKGD 10
+L HR KG+
Sbjct: 172 QLAHRLKGE 180


>sp|SPSS1_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 THRKKG 9
TH+KKG
Sbjct: 333 THKKKG 338


>sp|SPSS1_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanoregula boonei (strain DSM 21154

Query: 4 THRKKG 9
TH+KKG
Sbjct: 333 THKKKG 338


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 LTHRKKGD 10
+TH KKGD
Sbjct: 320 VTHLKKGD 327


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ELTHRKKGD 10
+L HR KG+
Sbjct: 172 QLAHRLKGE 180


>sp|DHQS_CENSY|3-DEHYDROQUINATE synthase|Cenarchaeum symbiosum (strain A)

Query: 3 LTHRKKGD 10
+TH KKGD
Sbjct: 305 VTHLKKGD 312


>sp|G1PDH_STAMF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Staphylothermus marinus (strain ATCC 43588

Query: 2 ELTHRKKGD 10
+L HR KG+
Sbjct: 187 QLAHRLKGE 195


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 3 LTHRKKGD 10
LTH K GD
Sbjct: 788 LTHFKPGD 795




448|SequenceR|2245|2236|VSDTMKELTH

>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 1 VSDTMKE 7
VSDT+KE
Sbjct: 546 VSDTLKE 552


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VSDTMKELTH 10
VSDT+K + H
Sbjct: 211 VSDTLKIIEH 220


>sp|AMZA_SULAC|ARCHAEMETZINCIN acidocaldarius (strain ATCC 33909

Query: 1 VSDTMKELTH 10
+ T+KE+TH
Sbjct: 120 IERTLKEVTH 129




449|SequenceR|2250|2241|CYLCTVSDTM

>sp|RIFK_HALSA|RIBOFLAVIN kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CYLCTV 6
CY CTV
Sbjct: 177 CYACTV 182


>sp|DPHB_HALMA|DIPHTHINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 LCTVSDTM 10
CT DTM
Sbjct: 80 FCTAGDTM 87


>sp|Y574_METTH|UNCHARACTERIZED protein MTH_574|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YLCTVSD 8
+ CTVSD
Sbjct: 177 HFCTVSD 183


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 1 CYLCTVS 7
C LCTV+
Sbjct: 98 CSLCTVT 104


>sp|RPO3_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma acidophilum (strain ATCC

Query: 1 CYLCTVS 7
C LCTV+
Sbjct: 98 CSLCTVT 104


>sp|Y599_METJA|UNCHARACTERIZED protein MJ0599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CYLCTVSD 8
C+LC + D
Sbjct: 103 CHLCKILD 110




450|SequenceR|2255|2246|KSFSNCYLCT

>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FSNCYLC 9
F NCY C
Sbjct: 169 FPNCYRC 175


>sp|SPCS_METMP|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FSNCYLCT 10
F NCYL T
Sbjct: 398 FGNCYLGT 405


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 1 KSFSNCYLC 9
++F+N YLC
Sbjct: 404 ETFNNFYLC 412


>sp|THIM_METPE|HYDROXYETHYLTHIAZOLE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KSFSNCYLCT 10
KS N Y CT
Sbjct: 153 KSLVNAYSCT 162


>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 NCYLC 9
NCY C
Sbjct: 100 NCYYC 104


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 5 NCYLC 9
NCY C
Sbjct: 100 NCYYC 104


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 NCYLC 9
NCY C
Sbjct: 100 NCYYC 104


>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 4 SNCYLC 9
+NCY C
Sbjct: 40 NNCYYC 45


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 5 NCYLC 9
+CYLC
Sbjct: 126 HCYLC 130


>sp|RIFK_HALSA|RIBOFLAVIN kinase|Halobacterium salinarum (strain ATCC 700922

Query: 4 SNCYLCT 10
+ CY CT
Sbjct: 175 ATCYACT 181


>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 5 NCYLC 9
+CYLC
Sbjct: 52 SCYLC 56




451|SequenceR|2260|2251|KQKSQKSFSN

>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KQKSQKSFSN 10
K + QK+FSN
Sbjct: 238 KDEEQKNFSN 247




452|SequenceR|2265|2256|VLLFNKQKSQ

>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 VLLFNKQKS 9
V+LFN+Q S
Sbjct: 421 VVLFNRQPS 429


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VLLFNKQKS 9
V+LFN+Q S
Sbjct: 416 VVLFNRQPS 424


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 1 VLLFNKQKS 9
V+LFN+Q S
Sbjct: 416 VVLFNRQPS 424


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 VLLFNKQKS 9
++LFN+Q S
Sbjct: 424 IVLFNRQPS 432


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 1 VLLFNKQKS 9
++LFN+Q S
Sbjct: 416 IVLFNRQPS 424


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 VLLFNKQKS 9
++LFN+Q S
Sbjct: 411 IVLFNRQPS 419


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 VLLFNKQKS 9
++LFN+Q S
Sbjct: 411 IVLFNRQPS 419


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 VLLFNKQK 8
VLLF K+K
Sbjct: 244 VLLFEKEK 251


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VLLFNKQK 8
VLLF K+K
Sbjct: 244 VLLFEKEK 251


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 VLLFNKQK 8
VLLF K+K
Sbjct: 244 VLLFEKEK 251


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 1 VLLFNKQK 8
VLLF K+K
Sbjct: 244 VLLFEKEK 251


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VLLFNKQK 8
VLLF K+K
Sbjct: 244 VLLFEKEK 251




453|SequenceR|2270|2261|GDATGVLLFN

>sp|TRPF_METMP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GDATGVLL 8
G+ATGV+L
Sbjct: 21 GNATGVIL 28


>sp|TRPF_METM7|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C7 /

Query: 1 GDATGVLL 8
G+ATGV+L
Sbjct: 21 GNATGVIL 28


>sp|TRPF_METM6|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C6 /

Query: 1 GDATGVLL 8
G+ATGV+L
Sbjct: 21 GNATGVIL 28


>sp|TRPF_METM5|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C5 /

Query: 1 GDATGVLL 8
G+ATGV+L
Sbjct: 21 GNATGVIL 28


>sp|TRPF_META3|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GDATGVLL 8
DATGV+L
Sbjct: 21 ADATGVIL 28


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides burtonii

Query: 4 TGVLLFN 10
TG+L+FN
Sbjct: 296 TGLLMFN 302


>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DATGVLLFN 10
+ TG+L FN
Sbjct: 254 EETGILTFN 262




454|SequenceR|2275|2266|FIALKGDATG

>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 1 FIALKGDA 8
++ALKGDA
Sbjct: 425 YLALKGDA 432


>sp|RLME_METMP|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 IALKGDAT 9
IA+KGD T
Sbjct: 91 IAIKGDMT 98


>sp|RLME_METM7|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 IALKGDAT 9
IA+KGD T
Sbjct: 91 IAIKGDMT 98


>sp|RLME_METM6|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 IALKGDAT 9
IA+KGD T
Sbjct: 91 IAIKGDMT 98


>sp|RLME_METM5|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 IALKGDAT 9
IA+KGD T
Sbjct: 91 IAIKGDMT 98


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FIALKGDA 8
+ALKGDA
Sbjct: 425 LLALKGDA 432


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 2 IALKGDATG 10
+++KG++TG
Sbjct: 43 LSIKGESTG 51




455|SequenceR|2280|2271|VTKDEFIALK

>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 VTKDEFIAL 9
VT+DE IAL
Sbjct: 85 VTQDEVIAL 93


>sp|SYY2_PYRAE|TYROSINE--TRNA ligase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VTKDEFIALK 10
VT++EF+ LK
Sbjct: 12 VTREEFLRLK 21


>sp|HMDH_HALVD|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Haloferax volcanii (strain ATCC 29605

Query: 2 TKDEFIALK 10
T+D F ALK
Sbjct: 149 TRDNFAALK 157


>sp|RS4E_METS3|SMALL ribosomal subunit protein eS4|Methanobrevibacter smithii (strain

Query: 3 KDEFIALK 10
KDEF+ LK
Sbjct: 215 KDEFLTLK 222


>sp|Y1076_METJA|UNCHARACTERIZED ATP-binding protein MJ1076|Methanocaldococcus jannaschii (strain

Query: 2 TKDEFIAL 9
TKDEF+++
Sbjct: 65 TKDEFLSI 72


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VTKDEFIALK 10
VTKD+F LK
Sbjct: 448 VTKDDFERLK 457


>sp|Y649_ARCFU|UPF0280 protein AF_0649|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VTKDEFIAL 9
V KDE +AL
Sbjct: 205 VVKDELVAL 213


>sp|RRP41_PYRAB|EXOSOME complex component Rrp41|Pyrococcus abyssi (strain GE5 /

Query: 1 VTKDEFI 7
+TKDEFI
Sbjct: 207 LTKDEFI 213


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 2 TKDEFIALK 10
TKDE ALK
Sbjct: 270 TKDEIEALK 278


>sp|PGK_THEAC|PHOSPHOGLYCERATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 KDEFIALK 10
KD+FI+L+
Sbjct: 66 KDDFISLR 73




456|SequenceR|2285|2276|AGKLKVTKDE

>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 1 AGKLKVTKDE 10
AGK+K+TK+E
Sbjct: 157 AGKIKITKEE 166


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 1 AGKLKVTKDE 10
AGK+K+TK+E
Sbjct: 157 AGKIKITKEE 166


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 2 GKLKVTKDE 10
GK+++TKDE
Sbjct: 135 GKIRITKDE 143


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 AGKLKVTKDE 10
A KL+V +DE
Sbjct: 755 ASKLRVGRDE 764


>sp|ENDA_METTH|TRNA-SPLICING endonuclease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GKLKVTKDE 10
GKLK+ KD+
Sbjct: 51 GKLKLMKDD 59


>sp|Y1681_METJA|UNCHARACTERIZED protein MJ1681|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GKLKVTKD 9
GK+K+T+D
Sbjct: 318 GKIKITED 325


>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 1 AGKLKVTKD 9
A K+KVTKD
Sbjct: 318 AKKVKVTKD 326


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 2 GKLKVTKD 9
GK KVTKD
Sbjct: 410 GKKKVTKD 417


>sp|SYS_SULAC|SERINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GKLKVTKDE 10
GK KV KD+
Sbjct: 128 GKFKVYKDD 136




457|SequenceR|2290|2281|IKLPAAGKLK

>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 LPAAGKLK 10
L AAGKLK
Sbjct: 306 LAAAGKLK 313




458|SequenceR|2295|2286|NGINLIKLPA

>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 INLIKLP 9
IN++KLP
Sbjct: 253 INIVKLP 259


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans

Query: 2 GINLIKLP 9
GIN IKLP
Sbjct: 5 GINGIKLP 12


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GINLIKLP 9
G+NL+ LP
Sbjct: 736 GMNLVDLP 743


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 INLIKLP 9
+N+IKLP
Sbjct: 253 VNIIKLP 259


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NGINLIKL 8
+GINLI+L
Sbjct: 256 SGINLIEL 263


>sp|RL7A_PYRNV|LARGE ribosomal subunit protein eL8|Pyrobaculum neutrophilum (strain DSM

Query: 1 NGINLIKLP 9
NG+N I LP
Sbjct: 140 NGLNAIPLP 148


>sp|DLDH_HALSA|DIHYDROLIPOYL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NGINLIK 7
NG+NLI+
Sbjct: 109 NGVNLIE 115


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NGINLIKL 8
+GINLI+L
Sbjct: 264 SGINLIEL 271


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGINLIKLPA 10
NGI +I++P+
Sbjct: 575 NGIPVIRIPS 584




459|SequenceR|2300|2291|LPTSVNGINL

>sp|AATD_SULAC|A-TYPE ATP synthase subunit D|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LPTSVNGINL 10
LPT +N INL
Sbjct: 7 LPTKINLINL 16


>sp|AATD_SULTO|A-TYPE ATP synthase subunit D|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LPTSVNGINL 10
LPT +N INL
Sbjct: 7 LPTKLNLINL 16


>sp|MPTA_METLZ|GTP cyclohydrolase MptA|Methanocorpusculum labreanum (strain ATCC

Query: 1 LPTSVNGINL 10
LP+S+ G NL
Sbjct: 52 LPSSLKGANL 61


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LPTSVNGIN 9
LPTS+N I+
Sbjct: 688 LPTSLNKID 696


>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 1 LPTSVNGIN 9
+PT VNG++
Sbjct: 302 MPTVVNGLS 310


>sp|ILVC_SACI7|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 LPTSVNGIN 9
+PT VNG++
Sbjct: 302 MPTVVNGLS 310


>sp|ILVC_SACI6|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.16.4

Query: 1 LPTSVNGIN 9
+PT VNG++
Sbjct: 302 MPTVVNGLS 310


>sp|ILVC_SACI4|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 1 LPTSVNGIN 9
+PT VNG++
Sbjct: 302 MPTVVNGLS 310


>sp|ILVC_SACI3|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 LPTSVNGIN 9
+PT VNG++
Sbjct: 302 MPTVVNGLS 310


>sp|ILVC_SACI2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 LPTSVNGIN 9
+PT VNG++
Sbjct: 302 MPTVVNGLS 310


>sp|ILVC_SACI1|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 LPTSVNGIN 9
+PT VNG++
Sbjct: 302 MPTVVNGLS 310


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LPTSVNG 7
+PT+VNG
Sbjct: 219 VPTAVNG 225


>sp|MPTA_ARCFU|GTP cyclohydrolase MptA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPTSVNGINL 10
LP + G+NL
Sbjct: 50 LPAHLKGVNL 59


>sp|HIS1_PYRIL|ATP phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LPTSVNGINL 10
LPTS N +N+
Sbjct: 36 LPTSWNDVNI 45


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LPTSVNGIN 9
+PT V G+N
Sbjct: 236 VPTLVRGVN 244




460|SequenceR|2305|2296|ESLCMLPTSV

>sp|CBIL_METJA|PROBABLE cobalt-precorrin-2 C(20)-methyltransferase|Methanocaldococcus

Query: 1 ESLCMLP 7
E LC+LP
Sbjct: 146 EKLCILP 152


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 ESLCMLPTSV 10
E+LC+ PT +
Sbjct: 104 ENLCLPPTEI 113


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 2 SLCMLPTS 9
++C++PTS
Sbjct: 192 NICIVPTS 199




461|SequenceR|2310|2301|TSNTSESLCM

>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 1 TSNTSESL 8
T NTSESL
Sbjct: 83 TKNTSESL 90


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TSNTSESLCM 10
T+NTS+SL +
Sbjct: 443 TNNTSDSLSI 452




462|SequenceR|2315|2306|MVNRETSNTS

***** No hits found ******


463|SequenceR|2320|2311|GCGGWMVNRE

>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 GCGGWMV 7
GCG W+V
Sbjct: 794 GCGEWLV 800


>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GWMVNRE 10
GW +NRE
Sbjct: 208 GWAINRE 214


>sp|RS13_METMJ|SMALL ribosomal subunit protein uS13|Methanoculleus marisnigri (strain

Query: 5 WMVNRE 10
WMVNR+
Sbjct: 78 WMVNRQ 83


>sp|RS13_HALWD|SMALL ribosomal subunit protein uS13|Haloquadratum walsbyi (strain DSM

Query: 4 GWMVNR 9
GWM NR
Sbjct: 89 GWMTNR 94


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 1 GCGGWMVNRE 10
G GG M NRE
Sbjct: 8 GTGGIMPNRE 17


>sp|Y384_ARCFU|UPF0252 protein AF_0384|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GCGGWMVN 8
GC G++VN
Sbjct: 139 GCKGYLVN 146


>sp|TF2B6_HALSA|TRANSCRIPTION initiation factor IIB 6|Halobacterium salinarum (strain ATCC

Query: 2 CGGWMVNRE 10
CGG +VN E
Sbjct: 28 CGGLVVNDE 36


>sp|Y1177_METJA|PUTATIVE transport protein MJ1177|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GGWMV 7
GGWMV
Sbjct: 239 GGWMV 243


>sp|RS13_METLZ|SMALL ribosomal subunit protein uS13|Methanocorpusculum labreanum

Query: 5 WMVNR 9
WMVNR
Sbjct: 79 WMVNR 83


>sp|ARCH_AERPE|PROTEIN archease|Aeropyrum pernix (strain ATCC 700893

Query: 2 CGGWM 6
CGGWM
Sbjct: 3 CGGWM 7


>sp|RS13_METBU|SMALL ribosomal subunit protein uS13|Methanococcoides burtonii (strain

Query: 5 WMVNRE 10
WM+NR+
Sbjct: 78 WMLNRQ 83


>sp|TOP6A_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GCGGWMV 7
G GGW V
Sbjct: 175 GTGGWAV 181


>sp|TOP6A_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 GCGGWMV 7
G GGW V
Sbjct: 175 GTGGWAV 181


>sp|TOP6A_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 1 GCGGWMV 7
G GGW V
Sbjct: 178 GSGGWAV 184


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 1 GCGGW 5
GCG W
Sbjct: 120 GCGSW 124


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 CGGWMVNR 9
CGG VNR
Sbjct: 252 CGGVAVNR 259


>sp|RS13_METMP|SMALL ribosomal subunit protein uS13|Methanococcus maripaludis (strain

Query: 1 GCGGWMVNRE 10
G WM NR+
Sbjct: 75 GIPSWMFNRK 84


>sp|RS13_METTH|SMALL ribosomal subunit protein uS13|Methanothermobacter

Query: 5 WMVNR 9
WM+NR
Sbjct: 78 WMINR 82


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GWMVNR 9
GW+VN+
Sbjct: 804 GWIVNK 809


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 1 GCGGW 5
GCG W
Sbjct: 120 GCGSW 124


>sp|TOP6A_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GCGGWMV 7
G GGW V
Sbjct: 175 GMGGWAV 181


>sp|SYH_METKA|HISTIDINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 GWMVNRE 10
GW+VN E
Sbjct: 357 GWVVNVE 363


>sp|RS13_METMA|SMALL ribosomal subunit protein uS13|Methanosarcina mazei (strain ATCC

Query: 5 WMVNRE 10
WM+NR+
Sbjct: 92 WMLNRQ 97


>sp|IXTPA_PYRAE|DITP/XTP pyrophosphatase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GGWMVNR 9
G W+ NR
Sbjct: 177 GAWLTNR 183


>sp|RS13_METAC|SMALL ribosomal subunit protein uS13|Methanosarcina acetivorans (strain

Query: 5 WMVNRE 10
WM+NR+
Sbjct: 92 WMLNRQ 97


>sp|MTAC_METBF|METHANOL--CORRINOID protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 GCGGWMVNRE 10
CGG VN++
Sbjct: 208 ACGGGAVNQD 217


>sp|RS13_METBF|SMALL ribosomal subunit protein uS13|Methanosarcina barkeri (strain

Query: 5 WMVNRE 10
WM+NR+
Sbjct: 92 WMLNRQ 97


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GGWMVNRE 10
GGW+ + E
Sbjct: 358 GGWITDEE 365


>sp|COBQ_THEON|PROBABLE cobyric acid synthase|Thermococcus onnurineus (strain NA1)

Query: 3 GGWMVNRE 10
GGW + E
Sbjct: 453 GGWSIEEE 460




464|SequenceR|2325|2316|SFIKTGCGGW

>sp|RS5_METAC|SMALL ribosomal subunit protein uS5|Methanosarcina acetivorans (strain

Query: 1 SFIKTGCGGW 10
++I+ GCG W
Sbjct: 109 TYIRRGCGSW 118


>sp|RS5_METMA|SMALL ribosomal subunit protein uS5|Methanosarcina mazei (strain ATCC

Query: 1 SFIKTGCGGW 10
++I+ GCG W
Sbjct: 109 TYIRRGCGSW 118


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 3 IKTGCGGW 10
IK GCG W
Sbjct: 123 IKRGCGSW 130


>sp|RS5_PYRHO|SMALL ribosomal subunit protein uS5|Pyrococcus horikoshii (strain ATCC

Query: 3 IKTGCGGW 10
IK GCG W
Sbjct: 124 IKRGCGSW 131


>sp|RS5_PYRFU|SMALL ribosomal subunit protein uS5|Pyrococcus furiosus (strain ATCC

Query: 3 IKTGCGGW 10
IK GCG W
Sbjct: 124 IKRGCGSW 131


>sp|RS5_PYRAB|SMALL ribosomal subunit protein uS5|Pyrococcus abyssi (strain GE5 /

Query: 3 IKTGCGGW 10
IK GCG W
Sbjct: 124 IKRGCGSW 131


>sp|RS5_PICTO|SMALL ribosomal subunit protein uS5|Picrophilus torridus (strain ATCC

Query: 3 IKTGCGGW 10
IK GCG W
Sbjct: 109 IKRGCGSW 116


>sp|RS5_META3|SMALL ribosomal subunit protein uS5|Methanococcus aeolicus (strain ATCC

Query: 3 IKTGCGGW 10
++TGCG W
Sbjct: 117 VRTGCGSW 124


>sp|RS5_METBF|SMALL ribosomal subunit protein uS5|Methanosarcina barkeri (strain Fusaro

Query: 1 SFIKTGCGGW 10
++I GCG W
Sbjct: 109 TYIHRGCGSW 118


>sp|RS5_METBU|SMALL ribosomal subunit protein uS5|Methanococcoides burtonii (strain DSM

Query: 3 IKTGCGGW 10
IK GCG W
Sbjct: 113 IKRGCGSW 120


>sp|RS5_CENSY|SMALL ribosomal subunit protein uS5|Cenarchaeum symbiosum (strain A)

Query: 3 IKTGCGGW 10
IK GCG W
Sbjct: 131 IKLGCGSW 138


>sp|RS5_PYRAR|SMALL ribosomal subunit protein uS5|Pyrobaculum arsenaticum (strain DSM

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 113 VRRGCGSW 120


>sp|RS5_PYRAE|SMALL ribosomal subunit protein uS5|Pyrobaculum aerophilum (strain ATCC

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 129 VRRGCGSW 136


>sp|RS5_PYRIL|SMALL ribosomal subunit protein uS5|Pyrobaculum islandicum (strain DSM

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 113 VRRGCGSW 120


>sp|RS5_METJA|SMALL ribosomal subunit protein uS5|Methanocaldococcus jannaschii (strain

Query: 3 IKTGCGGW 10
+K GCG W
Sbjct: 112 VKRGCGSW 119


>sp|RS5_PYRCJ|SMALL ribosomal subunit protein uS5|Pyrobaculum calidifontis (strain DSM

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 113 VRRGCGSW 120


>sp|RS5_THEVO|SMALL ribosomal subunit protein uS5|Thermoplasma volcanium (strain ATCC

Query: 3 IKTGCGGW 10
I+ GCG W
Sbjct: 109 IRRGCGSW 116


>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 117 VRRGCGSW 124


>sp|RS5_METM6|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C6

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 124 VRVGCGSW 131


>sp|RS5_METVS|SMALL ribosomal subunit protein uS5|Methanococcus vannielii (strain ATCC

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 120 VRVGCGSW 127


>sp|RS5_METVA|SMALL ribosomal subunit protein uS5|Methanococcus vannielii

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 120 VRVGCGSW 127


>sp|RS5_METM5|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C5

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 124 VRVGCGSW 131


>sp|RS5_THEAC|SMALL ribosomal subunit protein uS5|Thermoplasma acidophilum (strain ATCC

Query: 3 IKTGCGGW 10
I+ GCG W
Sbjct: 109 IRRGCGSW 116


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 117 VRRGCGSW 124


>sp|RS5_METMP|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain DSM

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 120 VRVGCGSW 127


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 117 VRRGCGSW 124


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 117 VRRGCGSW 124


>sp|RS5_SULAC|SMALL ribosomal subunit protein uS5|Sulfolobus acidocaldarius (strain

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 117 VRRGCGSW 124


>sp|RS5_AERPE|SMALL ribosomal subunit protein uS5|Aeropyrum pernix (strain ATCC 700893

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 118 VRRGCGSW 125


>sp|RS5_IGNH4|SMALL ribosomal subunit protein uS5|Ignicoccus hospitalis (strain KIN4/I

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 114 VRRGCGSW 121


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SFIKTGCGGW 10
SF K G GW
Sbjct: 411 SFYKAGARGW 420


>sp|RS5_METM7|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C7

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 124 VRIGCGSW 131


>sp|RS5_METS5|SMALL ribosomal subunit protein uS5|Metallosphaera sedula (strain ATCC

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 117 VRRGCGSW 124


>sp|RS5_STAMF|SMALL ribosomal subunit protein uS5|Staphylothermus marinus (strain ATCC

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 118 VRRGCGSW 125


>sp|RS5_METS3|SMALL ribosomal subunit protein uS5|Methanobrevibacter smithii (strain

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 112 VRRGCGDW 119


>sp|RS5_METB6|SMALL ribosomal subunit protein uS5|Methanoregula boonei (strain DSM

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 112 VRRGCGSW 119


>sp|Y053_METJA|UNCHARACTERIZED protein MJ0053|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FIKTGCG 8
F KTGCG
Sbjct: 16 FGKTGCG 22


>sp|RS5_THEPD|SMALL ribosomal subunit protein uS5|Thermofilum pendens (strain DSM 2475

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 109 VRRGCGSW 116


>sp|RS5_METHJ|SMALL ribosomal subunit protein uS5|Methanospirillum hungatei JF-1

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 112 VRRGCGSW 119


>sp|RS5_METTH|SMALL ribosomal subunit protein uS5|Methanothermobacter

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 114 VRRGCGDW 121


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19 /

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 114 VRRGCGSW 121


>sp|RS5_HALMA|SMALL ribosomal subunit protein uS5|Haloarcula marismortui (strain ATCC

Query: 3 IKTGCGGW 10
+ GCG W
Sbjct: 111 VSRGCGSW 118


>sp|RS5_ARCFU|SMALL ribosomal subunit protein uS5|Archaeoglobus fulgidus (strain ATCC

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 109 VQRGCGSW 116


>sp|RS5_HALSA|SMALL ribosomal subunit protein uS5|Halobacterium salinarum (strain ATCC

Query: 3 IKTGCGGW 10
+ GCG W
Sbjct: 111 VSRGCGSW 118


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 FIKTGCGGW 10
+ GCG W
Sbjct: 790 LVSEGCGEW 798


>sp|RS5_METTP|SMALL ribosomal subunit protein uS5|Methanothrix thermoacetophila (strain

Query: 3 IKTGCGGW 10
I GCG W
Sbjct: 114 INRGCGSW 121


>sp|RS5_NANEQ|SMALL ribosomal subunit protein uS5|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 IKTGCGGW 10
+ GCG W
Sbjct: 124 VARGCGSW 131


>sp|RS5_METLZ|SMALL ribosomal subunit protein uS5|Methanocorpusculum labreanum (strain

Query: 3 IKTGCGGW 10
++ GCG W
Sbjct: 112 VRRGCGSW 119


>sp|RS5_METMJ|SMALL ribosomal subunit protein uS5|Methanoculleus marisnigri (strain

Query: 3 IKTGCGGW 10
+ GCG W
Sbjct: 112 VSRGCGSW 119


>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IKTGCGG 9
IKTGC G
Sbjct: 444 IKTGCIG 450


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IKTGCG 8
++TGCG
Sbjct: 131 VRTGCG 136


>sp|DNLI_THEVO|DNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SFIKTGCGGW 10
S+ K G GW
Sbjct: 411 SYYKAGARGW 420


>sp|RS5_METAR|SMALL ribosomal subunit protein uS5|Methanocella arvoryzae (strain DSM

Query: 3 IKTGCGGW 10
+ GCG W
Sbjct: 116 VARGCGSW 123


>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 4 KTGCG 8
KTGCG
Sbjct: 73 KTGCG 77


>sp|PTFC_HALVD|PTS system fructose-specific EIIC component|Haloferax volcanii

Query: 2 FIKTGCGGW 10
F TG GW
Sbjct: 55 FNSTGTAGW 63




465|SequenceR|2330|2321|FDNSFSFIKT

>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 2 DNSFSFIK 9
DNSFS IK
Sbjct: 75 DNSFSHIK 82


>sp|Y2143_SULTO|UPF0284 protein STK_21430|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FDNSFSFI 8
F NSF F+
Sbjct: 142 FSNSFDFL 149


>sp|Y1383_THEVO|MEMO1 family protein TV1383|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FDNSFSFI 8
F NSF+F+
Sbjct: 139 FGNSFTFV 146


>sp|Y3404_METJA|UNCHARACTERIZED protein MJECS04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDNSFSFIK 9
F+N +FIK
Sbjct: 43 FENELNFIK 51




466|SequenceR|2335|2326|LKQITFDNSF

>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 1 LKQITFDNSF 10
+K ++FDN F
Sbjct: 511 VKHLSFDNEF 520


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 LKQITFDNSF 10
+K+I DNS+
Sbjct: 157 MKEIKLDNSY 166


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 ITFDNSF 10
I FDNSF
Sbjct: 137 IRFDNSF 143


>sp|MSRA_SACS2|PEPTIDE methionine sulfoxide reductase MsrA|Saccharolobus solfataricus

Query: 3 QITFDNS 9
QITFD+S
Sbjct: 56 QITFDSS 62


>sp|RL5_SULAC|LARGE ribosomal subunit protein uL5|Sulfolobus acidocaldarius (strain

Query: 1 LKQITFDN 8
LKQ +FDN
Sbjct: 94 LKQSSFDN 101


>sp|TRM1_THEVO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma volcanium

Query: 2 KQITFDNSF 10
K T DNSF
Sbjct: 232 KHTTIDNSF 240




467|SequenceR|2340|2331|TRTEILKQIT

>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TRTEILKQIT 10
TRT+ILK I+
Sbjct: 278 TRTDILKIIS 287


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TRTEILKQI 9
TR++ILK+I
Sbjct: 188 TRSKILKEI 196




468|SequenceR|2345|2336|SFLQSTRTEI

***** No hits found ******


469|SequenceR|2350|2341|SFAAYSFLQS

>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FAAYSFLQ 9
FA+Y FL+
Sbjct: 77 FASYEFLE 84




470|SequenceR|2355|2346|IINSDSFAAY

>sp|Y975_PYRAB|UPF0200 protein PYRAB09750|Pyrococcus abyssi (strain GE5 /

Query: 1 IINSDSFAAY 10
I+N DSF +
Sbjct: 161 IVNDDSFQKF 170


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 1 IINSDSFAAY 10
+IN D A+Y
Sbjct: 288 LINEDGLASY 297


>sp|KCY_METLZ|CYTIDYLATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 IINSDSFAA 9
I+NS++F+A
Sbjct: 151 ILNSETFSA 159




471|SequenceR|2360|2351|DVVVTIINSD

>sp|DPO4_METAC|DNA polymerase IV|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VVVTIINSD 10
V VT+INS+
Sbjct: 297 VTVTVINSN 305


>sp|DPO41_METMA|DNA polymerase IV 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VVVTIINSD 10
V VT+INS+
Sbjct: 296 VTVTVINSN 304


>sp|FWDG_METJA|POLYFERREDOXIN protein FwdG|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VVTIINSD 10
VVT++N D
Sbjct: 51 VVTVVNQD 58




472|SequenceR|2365|2356|IYLATDVVVT

>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IYLATDVVVT 10
+Y+A ++VVT
Sbjct: 234 VYIALNIVVT 243




473|SequenceR|2370|2361|SNQKAIYLAT

***** No hits found ******


474|SequenceR|2375|2366|VEVVPSNQKA

>sp|SYDND_METST|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VEVVPSN 7
VE++PSN
Sbjct: 95 VEIIPSN 101


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 VEVVPSN 7
+EVVP+N
Sbjct: 336 IEVVPAN 342


>sp|RS19_METMP|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 1 VEVVPSNQK 9
+E+VPS Q+
Sbjct: 50 MEIVPSRQR 58


>sp|RS19_METM6|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 1 VEVVPSNQK 9
+E+VPS Q+
Sbjct: 50 MEIVPSRQR 58


>sp|RS19_METM7|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 1 VEVVPSNQK 9
+E+VPS Q+
Sbjct: 50 MEIVPSRQR 58


>sp|RS19_METM5|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 1 VEVVPSNQK 9
+E+VPS Q+
Sbjct: 50 MEIVPSRQR 58




475|SequenceR|2380|2371|TKKDWVEVVP

>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 KDWVEVV 9
KDWVE+V
Sbjct: 126 KDWVEIV 132


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 KDWVEVV 9
KDW+E+V
Sbjct: 361 KDWLEIV 367


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TKKDWVEVV 9
T KDW E+V
Sbjct: 82 TGKDWTEIV 90


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 DWVEVVP 10
DW+E+ P
Sbjct: 440 DWIEIDP 446


>sp|RL10E_METMP|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 1 TKKDWVEVVP 10
T+K++V VP
Sbjct: 18 TRKEYVRAVP 27


>sp|RL10E_METM7|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 1 TKKDWVEVVP 10
T+K++V VP
Sbjct: 18 TRKEYVRAVP 27


>sp|RL10E_METM6|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 1 TKKDWVEVVP 10
T+K++V VP
Sbjct: 18 TRKEYVRAVP 27


>sp|RL10E_METM5|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 1 TKKDWVEVVP 10
T+K++V VP
Sbjct: 18 TRKEYVRAVP 27


>sp|RL10E_METST|LARGE ribosomal subunit protein uL16|Methanosphaera stadtmanae (strain

Query: 1 TKKDWVEVVP 10
T+KD++ +P
Sbjct: 6 TRKDYIRKIP 15


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 2 KKDWVEVV 9
K+DWV +V
Sbjct: 485 KRDWVGLV 492


>sp|Y2221_ARCFU|UNCHARACTERIZED protein AF_2221|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KKDWVEVVP 10
KK+W+E P
Sbjct: 264 KKEWIENSP 272


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TKKDWVEVV 9
T KDW E+V
Sbjct: 83 TGKDWREIV 91


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 TKKDWVEVV 9
T+K+WV+ +
Sbjct: 430 TRKEWVDAL 438


>sp|PSB_FERPA|PROTEASOME subunit beta|Ferroglobus placidus (strain DSM 10642

Query: 1 TKKDWVEVVP 10
T+K++VE+ P
Sbjct: 190 TEKEYVELTP 199


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 1 TKKDWVEVV 9
T+K+WV+ V
Sbjct: 145 TEKEWVDPV 153


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 TKKDWVEVV 9
T+K+WV+ +
Sbjct: 433 TRKEWVDAL 441


>sp|COFH1_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina acetivorans (strain

Query: 4 DWVEVV 9
+WVEVV
Sbjct: 191 EWVEVV 196


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 TKKDWVEVV 9
T+K+WV+ +
Sbjct: 433 TRKEWVDAL 441


>sp|KAD6_METBF|PUTATIVE adenylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 4 DWVEVVP 10
DW+++VP
Sbjct: 176 DWIDLVP 182


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 TKKDWVE 7
T+K+WV+
Sbjct: 430 TRKEWVD 436


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 KDWVEV 8
K+WVEV
Sbjct: 290 KEWVEV 295


>sp|RNZ_NANEQ|RIBONUCLEASE Z|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 KKDWV 6
KKDW+
Sbjct: 280 KKDWI 284


>sp|ILVC_METKA|KETOL-ACID reductoisomerase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 2 KKDWVEVVP 10
KKD EV+P
Sbjct: 58 KKDGFEVLP 66


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 DWVEV 8
DWVEV
Sbjct: 293 DWVEV 297


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 TKKDWVEVV 9
T+K+WV +
Sbjct: 432 TRKEWVHAL 440


>sp|SAMP2_PYRFU|SMALL archaeal modifier protein 2|Pyrococcus furiosus (strain ATCC

Query: 4 DWVEVVP 10
D+VEV+P
Sbjct: 58 DFVEVIP 64


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 TKKDWVEVV 9
T+K+W++ +
Sbjct: 432 TRKEWIDAL 440


>sp|SPSS1_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KKDWVEVV 9
K++W E+V
Sbjct: 223 KEEWAEIV 230


>sp|MTD_METB6|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoregula boonei

Query: 1 TKKDWVEV 8
TKK+W EV
Sbjct: 98 TKKEWEEV 105


>sp|KITH_HALSA|THYMIDINE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TKKDWVEVV 9
T WVEV+
Sbjct: 5 TNSGWVEVI 13


>sp|KITH_HALS3|THYMIDINE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TKKDWVEVV 9
T WVEV+
Sbjct: 5 TNSGWVEVI 13




476|SequenceR|2385|2376|GCLKETKKDW

>sp|THYX_PYRFU|FLAVIN-DEPENDENT thymidylate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GCLKETKKDW 10
GCLK+T+K W
Sbjct: 227 GCLKKTRKKW 236


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GCLKETKKD 9
CLKE +KD
Sbjct: 456 ACLKEIRKD 464


>sp|RL5_NITMS|LARGE ribosomal subunit protein uL5|Nitrosopumilus maritimus (strain

Query: 4 KETKKDW 10
KET++DW
Sbjct: 51 KETQRDW 57


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CLKETKKD 9
CLKE KD
Sbjct: 457 CLKEVSKD 464


>sp|HDRD_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina acetivorans

Query: 1 GCLKETKKDW 10
GC + +K DW
Sbjct: 246 GCFRASKVDW 255


>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 1 GCLKETKKDW 10
GC + +K DW
Sbjct: 246 GCFRASKVDW 255


>sp|THI4_SACS2|THIAMINE thiazole synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LKETKKDW 10
+KET +DW
Sbjct: 18 IKETMEDW 25


>sp|THI4_SACI7|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 LKETKKDW 10
+KET +DW
Sbjct: 18 IKETMEDW 25


>sp|THI4_SACI6|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 LKETKKDW 10
+KET +DW
Sbjct: 18 IKETMEDW 25


>sp|THI4_SACI4|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 LKETKKDW 10
+KET +DW
Sbjct: 18 IKETMEDW 25


>sp|THI4_SACI3|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.27)

Query: 3 LKETKKDW 10
+KET +DW
Sbjct: 18 IKETMEDW 25


>sp|THI4_SACI2|THIAMINE thiazole synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 LKETKKDW 10
+KET +DW
Sbjct: 18 IKETMEDW 25


>sp|THI4_SACI1|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 LKETKKDW 10
+KET +DW
Sbjct: 18 IKETMEDW 25


>sp|HDRD_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina thermophila

Query: 1 GCLKETKKDW 10
GC + K DW
Sbjct: 246 GCFRAAKVDW 255


>sp|HDRD_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina barkeri (strain

Query: 1 GCLKETKKDW 10
GC + K DW
Sbjct: 246 GCFRAAKIDW 255


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KETKKDW 10
KE++K+W
Sbjct: 268 KESRKEW 274


>sp|QUEE_THEAC|7-CARBOXY-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GCLKETKKDW 10
G +KE K+ W
Sbjct: 55 GIVKEAKEGW 64


>sp|THYX_THEON|FLAVIN-DEPENDENT thymidylate synthase|Thermococcus onnurineus (strain NA1)

Query: 1 GCLKETKKDW 10
GC K T++ W
Sbjct: 230 GCWKRTREKW 239


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GCLKETKKD 9
C KE KD
Sbjct: 456 ACFKEVSKD 464


>sp|ALR_METMP|ALANINE racemase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GCLKETKK 8
GC ETKK
Sbjct: 267 GCTFETKK 274


>sp|THI4_SULAC|THIAMINE thiazole synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LKETKKDW 10
+K+T +DW
Sbjct: 20 IKQTMEDW 27


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 KETKKDW 10
+ET KDW
Sbjct: 80 QETGKDW 86


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 KETKKDW 10
KET DW
Sbjct: 207 KETVNDW 213


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 LKETKKDW 10
LKE K+ W
Sbjct: 918 LKEVKEKW 925




477|SequenceR|2390|2381|VCDILGCLKE

>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 1 VCDILGCLK 9
VCD GCL+
Sbjct: 300 VCDETGCLQ 308


>sp|AKSA_METMA|HOMOCITRATE synthase AksA|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DILGCLKE 10
D+LGC KE
Sbjct: 131 DMLGCAKE 138


>sp|SYY_PICTO|TYROSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 VCDILGCLKE 10
+CDI+G ++E
Sbjct: 315 LCDIIGPVRE 324


>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DILGCLKE 10
D+LGC KE
Sbjct: 131 DMLGCAKE 138


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DILGCLKE 10
DIL CLK+
Sbjct: 365 DILNCLKK 372


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 3 DILGCLKE 10
DIL CLK+
Sbjct: 365 DILNCLKK 372


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 3 DILGCLKE 10
DILG LKE
Sbjct: 782 DILGKLKE 789


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VCDILGCL 8
+CD GCL
Sbjct: 219 ICDEKGCL 226


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VCDILGCLKE 10
+ D+LG LKE
Sbjct: 29 IVDVLGDLKE 38


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 VCDILGC 7
VC I+GC
Sbjct: 446 VCAIMGC 452


>sp|3MGH_METMJ|PUTATIVE 3-methyladenine DNA glycosylase|Methanoculleus marisnigri (strain

Query: 3 DILGCL 8
D+LGCL
Sbjct: 18 DLLGCL 23


>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DILGCLKE 10
D+LG LKE
Sbjct: 362 DLLGTLKE 369


>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 1 VCDILGCL 8
VC++ GC+
Sbjct: 61 VCEMCGCV 68


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 1 VCDILGCL 8
VC++ GC+
Sbjct: 61 VCEMCGCV 68


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 1 VCDILGCL 8
VC++ GC+
Sbjct: 61 VCEMCGCV 68


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 1 VCDILGCL 8
VC++ GC+
Sbjct: 61 VCEMCGCV 68


>sp|GFCR_METVS|TRANSCRIPTIONAL regulator GfcR|Methanococcus vannielii (strain ATCC 35089

Query: 1 VCDILG 6
+CDILG
Sbjct: 80 MCDILG 85


>sp|KPRS_METTH|RIBOSE-PHOSPHATE pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 VCDILGC 7
V DILGC
Sbjct: 172 VSDILGC 178


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VCDILGC 7
+C+I GC
Sbjct: 232 ICNISGC 238


>sp|Y905_METJA|UNCHARACTERIZED protein MJ0905|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CDILGCLK 9
++LGCLK
Sbjct: 49 SNVLGCLK 56




478|SequenceR|2395|2386|ERLFHVCDIL

>sp|NK_METTH|NUCLEOSIDE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ERLFHVCDIL 10
ER VCDIL
Sbjct: 177 ERAVGVCDIL 186


>sp|Y697_METVS|MEMO1 family protein Mevan_0697|Methanococcus vannielii (strain ATCC

Query: 1 ERLFHVCDIL 10
ERL+ CDI+
Sbjct: 116 ERLWKECDII 125


>sp|Y1387_METMP|MEMO1 family protein MMP1387|Methanococcus maripaludis (strain DSM 14266

Query: 1 ERLFHVCDIL 10
+RL+ CDIL
Sbjct: 116 DRLWKECDIL 125


>sp|MTRH_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus vannielii (strain ATCC

Query: 5 HVCDI 9
HVCDI
Sbjct: 258 HVCDI 262


>sp|MTRH_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain DSM

Query: 5 HVCDI 9
HVCDI
Sbjct: 258 HVCDI 262


>sp|MTRH_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain C5

Query: 5 HVCDI 9
HVCDI
Sbjct: 258 HVCDI 262


>sp|MTRH_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus aeolicus (strain ATCC

Query: 5 HVCDI 9
HVCDI
Sbjct: 258 HVCDI 262


>sp|RS10_METTH|SMALL ribosomal subunit protein uS10|Methanothermobacter

Query: 1 ERLFHVCDIL 10
E+L +VCD L
Sbjct: 14 EKLAYVCDQL 23


>sp|RS10_METS3|SMALL ribosomal subunit protein uS10|Methanobrevibacter smithii (strain

Query: 1 ERLFHVCDIL 10
E+L +VCD L
Sbjct: 14 EKLAYVCDQL 23


>sp|Y191_METM5|MEMO1 family protein MmarC5_0191|Methanococcus maripaludis (strain C5 /

Query: 1 ERLFHVCDIL 10
+RL+ CD+L
Sbjct: 116 DRLWKECDVL 125


>sp|GFO6_HALMA|D-XYLOSE 1-dehydrogenase [NADP(+)]|Haloarcula marismortui (strain ATCC 43049

Query: 1 ERLFHVCD 8
ER+ VCD
Sbjct: 131 ERMVEVCD 138


>sp|QUEC_METB6|7-CYANO-7-DEAZAGUANINE synthase|Methanoregula boonei (strain DSM 21154

Query: 4 FHVCD 8
FH+CD
Sbjct: 144 FHLCD 148


>sp|MTRH_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanocaldococcus jannaschii (strain

Query: 3 LFHVCDI 9
+ HVCD+
Sbjct: 256 IHHVCDV 262


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 ERLFHVCDIL 10
ERL+ CD +
Sbjct: 57 ERLYEGCDYI 66




479|SequenceR|2400|2391|EKVMVERLFH

>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKVMVERLFH 10
EKV +E FH
Sbjct: 1640 EKVRIEEKFH 1649




480|SequenceR|2405|2396|KSEKNEKVMV

>sp|Y401_METMA|UPF0228 protein MM_0401|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EKNEKVMV 10
EKNEKV++
Sbjct: 163 EKNEKVLI 170


>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KSEKNEKVMV 10
K+EK EK+++
Sbjct: 37 KTEKKEKILI 46




481|SequenceR|2410|2401|YSMKHKSEKN

>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 MKHKSEKN 10
+KHK EKN
Sbjct: 10 LKHKIEKN 17




482|SequenceR|2415|2406|KVRGSYSMKH

>sp|BAST_HALS3|TRANSDUCER protein BasT|Halobacterium salinarum (strain ATCC 29341

Query: 1 KVRGSYSMK 9
++RGSY+ K
Sbjct: 16 RIRGSYAAK 24


>sp|HTR2_HALSA|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC

Query: 1 KVRGSYSMK 9
++RGSY K
Sbjct: 8 RIRGSYGTK 16


>sp|HTR2_HALS3|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC

Query: 1 KVRGSYSMK 9
++RGSY K
Sbjct: 8 RIRGSYGTK 16


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KVRGSYSM 8
KVRG Y M
Sbjct: 316 KVRGGYVM 323


>sp|PYRB_METJA|ASPARTATE carbamoyltransferase catalytic subunit|Methanocaldococcus

Query: 1 KVRGSYSMK 9
KV+GSY +K
Sbjct: 240 KVKGSYKIK 248


>sp|PYRB_HYPBU|ASPARTATE carbamoyltransferase catalytic subunit|Hyperthermus butylicus

Query: 1 KVRGSY 6
KVRGSY
Sbjct: 248 KVRGSY 253


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KVRGSYSMK 9
+VRG Y M+
Sbjct: 195 EVRGEYKMR 203


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 1 KVRGSYSM 8
KVRGSY +
Sbjct: 243 KVRGSYQV 250


>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter thermautotrophicus

Query: 1 KVRGSYSMKH 10
+VRG + +KH
Sbjct: 198 RVRGMWIIKH 207


>sp|PYRB_THEPD|ASPARTATE carbamoyltransferase catalytic subunit|Thermofilum pendens (strain

Query: 1 KVRGSY 6
KVRGSY
Sbjct: 251 KVRGSY 256


>sp|NDK_THEVO|NUCLEOSIDE diphosphate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VRGSYSM 8
+RG YSM
Sbjct: 101 IRGDYSM 107




483|SequenceR|2420|2411|QLCLTKVRGS

>sp|Y593_PYRCJ|UPF0201 protein Pcal_0593|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 CLTKVRGS 10
CL K+RG+
Sbjct: 51 CLEKLRGA 58


>sp|Y1201_ARCFU|UNCHARACTERIZED protein AF_1201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QLCLTKVRGS 10
QLC +RGS
Sbjct: 2 QLCSWNLRGS 11




484|SequenceR|2425|2416|LATNKQLCLT

>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 LATNKQLCL 9
+ATN+++CL
Sbjct: 335 IATNEKMCL 343


>sp|Y726_METJA|UNCHARACTERIZED protein MJ0726|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LATNKQLCL 9
L +NK+LCL
Sbjct: 149 LTSNKELCL 157


>sp|FTR_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 ATNKQLCLT 10
+TN+++C+T
Sbjct: 219 STNEKMCVT 227


>sp|FTR_METFV|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermus fervidus (strain ATCC 43054

Query: 2 ATNKQLCLT 10
+TN+++C+T
Sbjct: 219 STNEKMCVT 227




485|SequenceR|2430|2421|GTGIWLATNK

>sp|RL37A_METKA|LARGE ribosomal subunit protein eL43|Methanopyrus kandleri (strain AV19

Query: 1 GTGIWLAT 8
GTGIW T
Sbjct: 50 GTGIWRCT 57


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 2 TGIWLATNK 10
TG+ LATNK
Sbjct: 267 TGVPLATNK 275


>sp|RL37A_HALMA|LARGE ribosomal subunit protein eL43|Haloarcula marismortui (strain

Query: 1 GTGIW 5
GTGIW
Sbjct: 51 GTGIW 55


>sp|CMR3_SACS2|CRISPR system CMR subunit Cmr3|Saccharolobus solfataricus (strain ATCC

Query: 1 GTGIWLA 7
GTG WL+
Sbjct: 57 GTGDWLS 63


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTGIWL 6
G G+WL
Sbjct: 518 GVGVWL 523


>sp|BACR1_HALWD|BACTERIORHODOPSIN-I walsbyi (strain DSM 16790

Query: 1 GTGIWLA 7
G GIWLA
Sbjct: 15 GEGIWLA 21


>sp|BACR1_HALWC|BACTERIORHODOPSIN-I walsbyi (strain DSM 16854

Query: 1 GTGIWLA 7
G GIWLA
Sbjct: 15 GEGIWLA 21


>sp|Y1499_SULAC|PROBABLE glycosyltransferase Saci_1499|Sulfolobus acidocaldarius (strain

Query: 2 TGIWL 6
TGIWL
Sbjct: 442 TGIWL 446


>sp|RL24E_METS5|LARGE ribosomal subunit protein eL24|Metallosphaera sedula (strain ATCC

Query: 1 GTGIWLATNK 10
GT +W +NK
Sbjct: 27 GTILWFCSNK 36


>sp|BACR2_HALMA|BACTERIORHODOPSIN-II marismortui (strain ATCC 43049

Query: 1 GTGIWLA 7
G GIWLA
Sbjct: 13 GEGIWLA 19




486|SequenceR|2435|2426|LIHGGGTGIW

>sp|COFC_META3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LIHGGGT 7
LIHGGGT
Sbjct: 187 LIHGGGT 193


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 HGGGTGI 9
HGGGTGI
Sbjct: 487 HGGGTGI 493


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 IHGGGTGI 9
IHGGGT +
Sbjct: 220 IHGGGTDL 227


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 IHGGGTGI 9
IHGGGT +
Sbjct: 223 IHGGGTDL 230


>sp|PYRK_THEAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma acidophilum

Query: 1 LIHGGGTGI 9
LI GGG+GI
Sbjct: 95 LIIGGGSGI 103


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIHGGG 6
L+HGGG
Sbjct: 51 LVHGGG 56


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IHGGGTG 8
+HGGG G
Sbjct: 296 VHGGGKG 302


>sp|LYSZ_NITMS|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Nitrosopumilus

Query: 1 LIHGGG 6
L+HGGG
Sbjct: 33 LVHGGG 38


>sp|RIB7_SACS2|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Saccharolobus solfataricus (strain ATCC

Query: 1 LIHGGGTGIW 10
++ GGG IW
Sbjct: 141 MVEGGGHLIW 150


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 HGGGTGI 9
HGGGT I
Sbjct: 487 HGGGTAI 493


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IHGGGTGI 9
IHGGG+ +
Sbjct: 221 IHGGGSDL 228


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IHGGGTGI 9
IHGGG+ +
Sbjct: 223 IHGGGSDL 230


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IHGGGTGI 9
IHGGG+ +
Sbjct: 221 IHGGGSDL 228


>sp|LYSZ_SACI1|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LIHGGG 6
L+HGGG
Sbjct: 31 LVHGGG 36


>sp|LYSZ_SACI7|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LIHGGG 6
L+HGGG
Sbjct: 31 LVHGGG 36


>sp|LYSZ_SACI6|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LIHGGG 6
L+HGGG
Sbjct: 31 LVHGGG 36


>sp|LYSZ_SACI4|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LIHGGG 6
L+HGGG
Sbjct: 31 LVHGGG 36


>sp|LYSZ_SACI3|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LIHGGG 6
L+HGGG
Sbjct: 31 LVHGGG 36


>sp|LYSZ_SACI2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LIHGGG 6
L+HGGG
Sbjct: 31 LVHGGG 36


>sp|ARGB_METPE|ACETYLGLUTAMATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LIHGGGTGI 9
L+HGGG I
Sbjct: 56 LVHGGGPEI 64


>sp|ARGB_METMJ|ACETYLGLUTAMATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LIHGGGTGI 9
L+HGGG I
Sbjct: 56 LVHGGGPEI 64


>sp|LYSZ_SACS2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LIHGGG 6
L+HGGG
Sbjct: 31 LVHGGG 36


>sp|ARGB_METKA|ACETYLGLUTAMATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 LIHGGG 6
L+HGGG
Sbjct: 26 LVHGGG 31


>sp|RL15_HALLT|LARGE ribosomal subunit protein uL15|Halorubrum lacusprofundi (strain

Query: 3 HGGGT 7
HGGGT
Sbjct: 14 HGGGT 18


>sp|RL15_HALSA|LARGE ribosomal subunit protein uL15|Halobacterium salinarum (strain

Query: 3 HGGGT 7
HGGGT
Sbjct: 14 HGGGT 18


>sp|RL15_HALS3|LARGE ribosomal subunit protein uL15|Halobacterium salinarum (strain

Query: 3 HGGGT 7
HGGGT
Sbjct: 14 HGGGT 18


>sp|PYRK_THEVO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma volcanium

Query: 1 LIHGGGTGI 9
L+ GGG+GI
Sbjct: 95 LLVGGGSGI 103


>sp|LYSZ_CALMQ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Caldivirga

Query: 1 LIHGGG 6
LIHGGG
Sbjct: 29 LIHGGG 34


>sp|Y1758_ARCFU|UNCHARACTERIZED protein AF_1758|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HGGGTGIW 10
HGG G W
Sbjct: 61 HGGADGWW 68


>sp|ARGB_METS3|ACETYLGLUTAMATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LIHGGGTGI 9
++HGGG I
Sbjct: 56 IVHGGGPEI 64


>sp|LYSZ_METS5|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LIHGGG 6
L+HGGG
Sbjct: 31 LVHGGG 36


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 IHGGGTGI 9
IHGGG +
Sbjct: 223 IHGGGNDL 230


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 IHGGGTGI 9
IHGGG +
Sbjct: 223 IHGGGNDL 230


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IHGGGTGI 9
IHGGG +
Sbjct: 223 IHGGGADL 230


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IHGGGTGI 9
IHGGG +
Sbjct: 223 IHGGGNDL 230


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IHGGGTGI 9
IHGGG +
Sbjct: 222 IHGGGNDL 229


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 IHGGGTGI 9
IHGGG +
Sbjct: 223 IHGGGNDL 230


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IHGGG 6
IHGGG
Sbjct: 221 IHGGG 225


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 IHGGG 6
IHGGG
Sbjct: 222 IHGGG 226


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 IHGGG 6
IHGGG
Sbjct: 218 IHGGG 222


>sp|SYC_METMP|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IHGGG 6
IHGGG
Sbjct: 222 IHGGG 226


>sp|SYC_METM7|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 IHGGG 6
IHGGG
Sbjct: 222 IHGGG 226


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 IHGGG 6
IHGGG
Sbjct: 222 IHGGG 226


>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IHGGG 6
IHGGG
Sbjct: 221 IHGGG 225


>sp|SYC_ARCFU|CYSTEINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IHGGG 6
IHGGG
Sbjct: 225 IHGGG 229


>sp|GGR_PYRHO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IHGGG 6
IHGGG
Sbjct: 282 IHGGG 286


>sp|ARGB_METHJ|ACETYLGLUTAMATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LIHGGGTGI 9
++HGGG I
Sbjct: 56 IVHGGGPEI 64


>sp|ARGB_METLZ|ACETYLGLUTAMATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LIHGGGTGI 9
L+HGGG I
Sbjct: 57 LVHGGGPEI 65


>sp|ARGB_META3|ACETYLGLUTAMATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LIHGGGTGI 9
+IHGGG I
Sbjct: 59 IIHGGGPEI 67


>sp|RFCS_NATPD|REPLICATION factor C small subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 4 GGGTGIW 10
GGG IW
Sbjct: 8 GGGREIW 14


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IHGGGTGI 9
IHGGG +
Sbjct: 222 IHGGGVDL 229


>sp|TRPE1_HALSA|ANTHRANILATE synthase component 1 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 IHGGGTG 8
I+GGG G
Sbjct: 447 IYGGGVG 453


>sp|Y779_METS3|UPF0173 metal-dependent hydrolase Msm_0779|Methanobrevibacter smithii

Query: 1 LIHGGGTGIW 10
L H G TG++
Sbjct: 138 LFHAGDTGLF 147


>sp|PANB_PYRAR|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM

Query: 1 LIHGGGTGIW 10
+ GGG +W
Sbjct: 11 FVKGGGPYVW 20


>sp|IPK_THEAC|ISOPENTENYL phosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LIHGGGT 7
++HGGG+
Sbjct: 41 VVHGGGS 47


>sp|RL15_HALWD|LARGE ribosomal subunit protein uL15|Haloquadratum walsbyi (strain DSM

Query: 3 HGGGT 7
HGGGT
Sbjct: 14 HGGGT 18


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 3 HGGGT 7
HGGGT
Sbjct: 264 HGGGT 268


>sp|ARGB_ARCFU|ACETYLGLUTAMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIHGGGTGI 9
++HGGG I
Sbjct: 56 VVHGGGPEI 64


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 LIHGGG 6
++HGGG
Sbjct: 217 VVHGGG 222


>sp|ARGB_METVS|ACETYLGLUTAMATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LIHGGGTGI 9
++HGGG I
Sbjct: 59 IVHGGGPEI 67


>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 LIHGGGTGI 9
L+HGGG I
Sbjct: 57 LVHGGGPEI 65


>sp|ARGD_METTH|ACETYLORNITHINE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 LIHGGGTGIW 10
L HG G +W
Sbjct: 25 LSHGKGATVW 34


>sp|6PGD_HALVD|6-PHOSPHOGLUCONATE dehydrogenase, NAD(+)-dependent, decarboxylating|Haloferax volcanii

Query: 2 IHGGGTGIW 10
+ GG TG W
Sbjct: 238 VAGGSTGTW 246


>sp|Y1252_SULAC|UNCHARACTERIZED protein Saci_1252|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LIHGGGTGI 9
L HGGG +
Sbjct: 36 LSHGGGVAL 44


>sp|ARGB_METTP|ACETYLGLUTAMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LIHGGGTGI 9
++HGGG I
Sbjct: 56 VVHGGGPEI 64


>sp|Y2123_ARCFU|UNCHARACTERIZED protein AF_2123|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IHGGGTGIW 10
IH G G W
Sbjct: 44 IHAAGFGYW 52


>sp|ARGB_METAR|ACETYLGLUTAMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LIHGGGTGI 9
++HGGG I
Sbjct: 64 IVHGGGPEI 72


>sp|PYRC_HALSA|DIHYDROOROTASE salinarum (strain ATCC 700922

Query: 2 IHGGGTGIW 10
++GG TG W
Sbjct: 115 VNGGVTGEW 123


>sp|ARGB_METTH|ACETYLGLUTAMATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LIHGGGTGI 9
++HGGG I
Sbjct: 56 VVHGGGPEI 64


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 1 LIHGGGTG 8
+IHG G G
Sbjct: 34 IIHGDGIG 41


>sp|ARGB_METST|ACETYLGLUTAMATE kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LIHGGGTGI 9
++HGGG I
Sbjct: 62 VVHGGGPEI 70




487|SequenceR|2440|2431|SLDLLLIHGG

>sp|RNP3_METMA|RIBONUCLEASE P protein component 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SLDLLLIHGG 10
S+D+L++HGG
Sbjct: 84 SMDVLIVHGG 93


>sp|RNP3_METAC|RIBONUCLEASE P protein component 3|Methanosarcina acetivorans (strain ATCC

Query: 1 SLDLLLIHGG 10
S+D+L++HGG
Sbjct: 84 SMDVLIVHGG 93


>sp|RNP3_METBF|RIBONUCLEASE P protein component 3|Methanosarcina barkeri (strain Fusaro /

Query: 1 SLDLLLIHGG 10
S+D+L++HGG
Sbjct: 84 SVDVLIVHGG 93


>sp|DTDA_CENSY|D-AMINOACYL-TRNA deacylase|Cenarchaeum symbiosum (strain A)

Query: 2 LDLLLIHGG 10
+DLL+ HGG
Sbjct: 1 MDLLVAHGG 9


>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DLLLIHGG 10
DLLLI GG
Sbjct: 444 DLLLIDGG 451


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 3 DLLLIHGG 10
DLLLI GG
Sbjct: 448 DLLLIDGG 455


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 DLLLIHGG 10
DLLLI GG
Sbjct: 460 DLLLIDGG 467


>sp|SUCC2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 1 SLDLLLIHGG 10
++DL+ I+GG
Sbjct: 263 TMDLIYIYGG 272


>sp|NFI_METKA|ENDONUCLEASE V|Methanopyrus kandleri (strain AV19 /

Query: 2 LDLLLIHG 9
DLL +HG
Sbjct: 99 FDLLFVHG 106


>sp|RNP3_METMP|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain DSM 14266

Query: 2 LDLLLIHGG 10
+D+LL+ GG
Sbjct: 81 VDILLVEGG 89


>sp|RNP3_METM5|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C5 /

Query: 2 LDLLLIHGG 10
+D+LL+ GG
Sbjct: 81 VDILLVEGG 89


>sp|RNP3_METBU|RIBONUCLEASE P protein component 3|Methanococcoides burtonii (strain DSM 6242

Query: 2 LDLLLIHGG 10
+D+L +HGG
Sbjct: 83 VDVLAVHGG 91


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 3 DLLLIHGG 10
DL+LI GG
Sbjct: 458 DLILIDGG 465


>sp|AGL9_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl9|Haloferax volcanii

Query: 2 LDLLLIH 8
LDLL++H
Sbjct: 104 LDLLIVH 110


>sp|PYRK_METAR|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocella arvoryzae

Query: 3 DLLLIHGG 10
D+LLI GG
Sbjct: 94 DILLISGG 101


>sp|RNP3_METM6|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C6 /

Query: 2 LDLLLIHGG 10
+D+LL+ GG
Sbjct: 81 VDILLVEGG 89


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 3 DLLLIHGG 10
DL+LI GG
Sbjct: 439 DLVLIDGG 446


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 DLLLIHGG 10
DL+LI GG
Sbjct: 455 DLVLIDGG 462


>sp|RS24_IGNH4|SMALL ribosomal subunit protein eS24|Ignicoccus hospitalis (strain

Query: 2 LDLLLIH 8
LDL+L+H
Sbjct: 22 LDLVLVH 28


>sp|RNP3_METM7|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C7 /

Query: 3 DLLLIHGG 10
D+LL+ GG
Sbjct: 82 DILLVEGG 89


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 2 LDLLLIHGG 10
LD+++I GG
Sbjct: 55 LDVVIIEGG 63


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 1 SLDLLLIHG 9
S+D L +HG
Sbjct: 37 SIDALYLHG 45




488|SequenceR|2445|2436|ILRRTSLDLL

>sp|TBP_CENSY|TATA-BOX-BINDING protein|Cenarchaeum symbiosum (strain A)

Query: 2 LRRTSLDLL 10
LRR+S DLL
Sbjct: 166 LRRSSFDLL 174


>sp|UREG_SULTO|UREASE accessory protein UreG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ILRRTSLDLL 10
+++RTSLD++
Sbjct: 92 LMKRTSLDVI 101




489|SequenceR|2450|2441|NYIVRILRRT

>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 IVRILRR 9
IVRILRR
Sbjct: 139 IVRILRR 145


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 NYIVRILR 8
NY+ R+LR
Sbjct: 390 NYVHRVLR 397


>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 NYIVRILRR 9
+Y+VR LRR
Sbjct: 192 DYLVRELRR 200


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 NYIVRILRR 9
N +VRIL+R
Sbjct: 165 NALVRILKR 173




490|SequenceR|2455|2446|VSNCFNYIVR

>sp|RNH2_PYRIL|RIBONUCLEASE HII|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VSNCFNYIV 9
V++C NY+V
Sbjct: 55 VADCVNYVV 63


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 2 SNCFNYI 8
SNC NYI
Sbjct: 220 SNCRNYI 226


>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VSNCFNYIVR 10
+ NC Y++R
Sbjct: 26 LRNCIEYVIR 35


>sp|RNH2_PYRAE|RIBONUCLEASE HII|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VSNCFNYIV 9
V+ C NY+V
Sbjct: 55 VAACVNYVV 63


>sp|Y3936_METAC|UPF0060 membrane protein MA_3936|Methanosarcina acetivorans (strain ATCC

Query: 1 VSNCFNYIVR 10
V CF+Y++R
Sbjct: 97 VCGCFHYVLR 106


>sp|CBIM1_METLZ|PUTATIVE cobalt transport protein CbiM|Methanocorpusculum labreanum (strain

Query: 1 VSNCFNYIV 9
V+NC Y++
Sbjct: 148 VANCVTYLI 156


>sp|RNH2_PYRNV|RIBONUCLEASE HII|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 SNCFNYIV 9
++C NY+V
Sbjct: 59 ADCVNYVV 66


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NCFNYIV 9
NC N+IV
Sbjct: 495 NCVNHIV 501


>sp|Y1187_METJA|UNCHARACTERIZED protein MJ1187|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSNCFNYI 8
+ C+NYI
Sbjct: 183 LDECYNYI 190


>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 1 VSNCFNYIVR 10
+ FNYI++
Sbjct: 243 IEKIFNYIIK 252




491|SequenceR|2460|2451|TMMVRVSNCF

>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MVRVSNC 9
+VR++NC
Sbjct: 347 LVRITNC 353




492|SequenceR|2465|2456|SGLQATMMVR

>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 SGLQATMMV 9
SG Q TM+V
Sbjct: 128 SGFQRTMLV 136


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 SGLQATMMV 9
SG Q TM+V
Sbjct: 128 SGFQRTMLV 136




493|SequenceR|2470|2461|MVNKLSGLQA

>sp|OTC_META3|ORNITHINE carbamoyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 NKLSGLQ 9
NKLSGL+
Sbjct: 141 NKLSGLK 147




494|SequenceR|2475|2466|YGLVLMVNKL

>sp|TRUA_METBU|TRNA pseudouridine synthase A|Methanococcoides burtonii (strain DSM 6242

Query: 1 YGLVLM 6
YGLVLM
Sbjct: 219 YGLVLM 224


>sp|Y423_METJA|UNCHARACTERIZED ATP-binding protein MJ0423|Methanocaldococcus jannaschii (strain

Query: 1 YGLVLMVNK 9
YG+V+ VN+
Sbjct: 2 YGIVMFVNR 10


>sp|MDH_PYRAB|MALATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 YGLVLMVNKL 10
YGL LMV+ L
Sbjct: 246 YGLSLMVDIL 255


>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YGLVLMVNKL 10
YGL LMV+ L
Sbjct: 246 YGLSLMVDIL 255


>sp|RSMA_ARCFU|PROBABLE ribosomal RNA small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 YGLVLMVNK 9
YG+ L VNK
Sbjct: 214 YGVELAVNK 222




495|SequenceR|2480|2471|TNKRNYGLVL

>sp|AATD_METBU|A-TYPE ATP synthase subunit D|Methanococcoides burtonii (strain DSM 6242

Query: 2 NKRNYGLV 9
NKR YGL+
Sbjct: 116 NKRGYGLL 123


>sp|RNP3_PYRAB|RIBONUCLEASE P protein component 3|Pyrococcus abyssi (strain GE5 /

Query: 3 KRNYGLV 9
+RNYGLV
Sbjct: 49 ERNYGLV 55


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 NYGLVL 10
NYGL+L
Sbjct: 217 NYGLIL 222


>sp|VAPC2_METJA|RIBONUCLEASE VapC2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TNKRNYGL 8
TNKR+Y +
Sbjct: 61 TNKRHYDI 68




496|SequenceR|2485|2476|KQTGETNKRN

>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 1 KQTGETNKRN 10
K GET KRN
Sbjct: 347 KVNGETVKRN 356


>sp|Y182_ARCFU|UNCHARACTERIZED protein AF_0182|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GETNKRN 10
GET KRN
Sbjct: 210 GETYKRN 216


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 TGETNKRN 10
TG+TN R+
Sbjct: 124 TGDTNSRD 131




497|SequenceR|2490|2481|QIEKQKQTGE

>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 QIEKQKQTGE 10
+IEK K+TG+
Sbjct: 535 KIEKSKKTGK 544


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 QIEKQKQTG 9
QIEK K TG
Sbjct: 360 QIEKFKYTG 368




498|SequenceR|2495|2486|VTLCSQIEKQ

>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LCSQIEK 9
LCS++EK
Sbjct: 9 LCSRLEK 15


>sp|Y2354_ARCFU|UNCHARACTERIZED protein AF_2354|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VTLCSQIEK 9
+T CSQ+EK
Sbjct: 15 LTGCSQVEK 23




499|SequenceR|2500|2491|LNIDWVTLCS

>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LNIDWVTL 8
LN+ W TL
Sbjct: 58 LNVSWATL 65


>sp|CBID_METHJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 4 DWVTLCS 10
+W++LC+
Sbjct: 13 EWISLCT 19


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 2 NIDWV 6
NIDWV
Sbjct: 149 NIDWV 153


>sp|NPPNK_METJA|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanocaldococcus jannaschii (strain

Query: 2 NIDWV 6
NIDW+
Sbjct: 125 NIDWI 129


>sp|CBIM_METV3|PUTATIVE cobalt transport protein CbiM|Methanococcus voltae (strain ATCC

Query: 1 LNIDWVTLCS 10
LNI WV + +
Sbjct: 134 LNITWVVMLT 143




500|SequenceR|2505|2496|QVEHPLNIDW

>sp|AMPP1_ARCFU|AMP phosphorylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QVEHPLNID 9
+VEHPL+ID
Sbjct: 249 RVEHPLSID 257


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QVEHPLNIDW 10
Q HP+NI W
Sbjct: 648 QENHPVNIQW 657


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 2 VEHPLNIDW 10
+EHPL+I W
Sbjct: 278 MEHPLDISW 286


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 4 HPLNIDW 10
HP NIDW
Sbjct: 146 HPENIDW 152


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 EHPLNIDW 10
EHPL+ DW
Sbjct: 159 EHPLSEDW 166


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VEHPLNI 8
VEHP+NI
Sbjct: 83 VEHPINI 89


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QVEHPLNID 9
+VE+PL+ID
Sbjct: 248 KVEYPLSID 256


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QVEHPLNID 9
+VE+PL+ID
Sbjct: 247 RVEYPLSID 255


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QVEHPLNID 9
+VE+PL+ID
Sbjct: 247 RVEYPLSID 255


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 2 VEHPLNID 9
VE+PL+ID
Sbjct: 249 VEYPLSID 256


>sp|AMPPA_THEPD|AMP phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 1 QVEHPLNID 9
+VE+PL ID
Sbjct: 248 RVEYPLGID 256


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QVEHPLNID 9
++E+PL+ID
Sbjct: 248 KIEYPLSID 256


>sp|OTCC_THEVO|ORNITHINE carbamoyltransferase, catabolic|Thermoplasma volcanium (strain ATCC

Query: 2 VEHPLNI 8
VEHPL I
Sbjct: 126 VEHPLQI 132


>sp|OTCC_THEAC|ORNITHINE carbamoyltransferase, catabolic|Thermoplasma acidophilum (strain

Query: 2 VEHPLNI 8
VEHPL I
Sbjct: 126 VEHPLQI 132


>sp|Y587_METJA|UNCHARACTERIZED protein MJ0587|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QVEHPL 6
Q+EHPL
Sbjct: 108 QIEHPL 113


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 PLNIDW 10
PL IDW
Sbjct: 261 PLTIDW 266


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC

Query: 3 EHPLNIDW 10
EH IDW
Sbjct: 20 EHVFEIDW 27


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 QVEHPLNIDW 10
+ EH IDW
Sbjct: 765 ETEHGWEIDW 774


>sp|RN081_SACS2|CRISPR system ring nuclease SSO2081|Saccharolobus solfataricus (strain

Query: 3 EHPLNID 9
EHPL+I+
Sbjct: 68 EHPLDIE 74


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 1 QVEHPL 6
QVEHP+
Sbjct: 293 QVEHPI 298


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 PLNIDW 10
PL IDW
Sbjct: 255 PLTIDW 260


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 5 PLNIDW 10
PL IDW
Sbjct: 261 PLTIDW 266


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 QVEHPLNIDW 10
+ EH IDW
Sbjct: 767 EAEHGWEIDW 776


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VEHPLNIDW 10
VEH N DW
Sbjct: 437 VEHAKNTDW 445


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QVEHPLNIDW 10
Q++ PL++ W
Sbjct: 417 QIDAPLHLTW 426


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 QVEHPLNIDW 10
+EHP ID+
Sbjct: 615 HLEHPETIDY 624


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 QVEHPLNID 9
QVE P NI+
Sbjct: 143 QVEMPFNIE 151


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VEHPLNID 9
VE PL+ID
Sbjct: 250 VERPLSID 257


>sp|FDHD_SACS2|SULFUR carrier protein FdhD|Saccharolobus solfataricus (strain ATCC

Query: 2 VEHPLNI 8
VE PLNI
Sbjct: 27 VEEPLNI 33


>sp|MTRH_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain DSM

Query: 3 EHPLN 7
EHPLN
Sbjct: 312 EHPLN 316


>sp|MTRH_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain C5

Query: 3 EHPLN 7
EHPLN
Sbjct: 312 EHPLN 316


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 3 EHPLNIDW 10
E P+NI W
Sbjct: 307 EAPVNIAW 314


>sp|HCGF_METTW|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanothermobacter

Query: 4 HPLNIDW 10
+PLN +W
Sbjct: 26 YPLNYNW 32


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 3 EHPLNIDW 10
E P+NI W
Sbjct: 307 EAPVNIAW 314


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 3 EHPLNIDW 10
EH IDW
Sbjct: 766 EHGWEIDW 773


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 3 EHPLNIDW 10
EH IDW
Sbjct: 770 EHGWEIDW 777


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 3 EHPLNID 9
EHP N D
Sbjct: 283 EHPANAD 289


>sp|APGM_METST|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaera stadtmanae (strain ATCC

Query: 3 EHPLNID 9
+HP+NI+
Sbjct: 204 DHPVNIE 210


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 EHPLNIDW 10
EH IDW
Sbjct: 770 EHGWEIDW 777


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EHPLNIDW 10
E P+NI W
Sbjct: 315 EAPVNIAW 322


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 2 VEHPLNID 9
+EH LNI+
Sbjct: 197 IEHNLNIE 204




501|SequenceR|2510|2501|HKELNQVEHP

>sp|SPH3_HALVD|SMC-LIKE protein Sph3|Haloferax volcanii (strain ATCC 29605

Query: 1 HKELNQVE 8
H+ELN+VE
Sbjct: 442 HRELNEVE 449


>sp|APE1_AERPE|HOMING endonuclease I-ApeI|Aeropyrum pernix (strain ATCC 700893

Query: 1 HKELNQVEHP 10
H +NQ EHP
Sbjct: 74 HILVNQFEHP 83


>sp|GUAAA_PICTO|GMP synthase [glutamine-hydrolyzing] subunit A|Picrophilus torridus

Query: 1 HKELNQVEH 9
H E+N EH
Sbjct: 166 HPEVNNTEH 174




502|SequenceR|2515|2506|KRVEIHKELN

>sp|PURA_METM7|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C7 /

Query: 4 EIHKELN 10
EIHKEL+
Sbjct: 108 EIHKELD 114


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 2 RVEIHKEL 9
RVE+H+ L
Sbjct: 375 RVEVHRHL 382


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 4 EIHKELN 10
E+HKEL+
Sbjct: 108 EVHKELD 114


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VEIHKELN 10
+EI++ELN
Sbjct: 145 IEIYRELN 152


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KRVEIHKE 8
KRVE++KE
Sbjct: 340 KRVEVNKE 347


>sp|SPH3_HALVD|SMC-LIKE protein Sph3|Haloferax volcanii (strain ATCC 29605

Query: 3 VEIHKELN 10
+E+H+ELN
Sbjct: 439 IELHRELN 446


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RVEIHKELN 10
RV+IHK+ N
Sbjct: 255 RVQIHKDGN 263


>sp|GATE_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanospirillum hungatei JF-1 (strain

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 14 IEIHQQLN 21


>sp|DNLI2_METMA|DNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RVEIHKELN 10
RV+IHK+ N
Sbjct: 261 RVQIHKDGN 269


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 15 LEIHQQLN 22


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 15 LEIHQQLN 22


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 15 LEIHQQLN 22


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 15 LEIHQQLN 22


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 15 LEIHQQLN 22


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 15 LEIHQQLN 22


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 15 LEIHQQLN 22


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 15 LEIHQQLN 22


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 14 LEIHQQLN 21


>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 15 LEIHQQLN 22


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 12 LEIHQQLN 19


>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 14 LEIHQQLN 21


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 14 LEIHQQLN 21


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 14 LEIHQQLN 21


>sp|GATE_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C7 /

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 14 LEIHQQLN 21


>sp|GATE_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 3 VEIHKELN 10
+EIH++LN
Sbjct: 14 LEIHQQLN 21




503|SequenceR|2520|2511|KEALEKRVEI

>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 1 KEALEKRVEI 10
+EALE R+E+
Sbjct: 83 REALESRIEV 92


>sp|PUR2_PYRHO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KEALEKRVEI 10
+E++EKR+EI
Sbjct: 416 RESVEKRIEI 425


>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 EALEKRVE 9
EALEKR+E
Sbjct: 362 EALEKRLE 369


>sp|HIS3_METBU|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KEALEKRVE 9
+EALEK +E
Sbjct: 35 REALEKTIE 43


>sp|SERB_ARCFU|PHOSPHOSERINE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KEALEKRVEI 10
KEALE+RV +
Sbjct: 174 KEALEERVRL 183


>sp|RS8_IGNH4|SMALL ribosomal subunit protein uS8|Ignicoccus hospitalis (strain KIN4/I

Query: 1 KEALEKRV 8
KEA++KRV
Sbjct: 117 KEAIQKRV 124


>sp|HIS3_METMA|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KEALEKRVE 9
+EALEK VE
Sbjct: 34 REALEKTVE 42


>sp|SFSA_PYRFU|SUGAR fermentation stimulation protein homolog|Pyrococcus furiosus

Query: 1 KEALEKRVEI 10
KEALE VEI
Sbjct: 198 KEALEAGVEI 207


>sp|NADC_METJA|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 1 KEALEKRVEI 10
+EALE+R +I
Sbjct: 199 REALEERADI 208


>sp|DNAG_DESA1|DNA primase DnaG|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 EALEKRVEI 10
EAL+K++EI
Sbjct: 255 EALKKKIEI 263




504|SequenceR|2527|2516|EVSTRRMKEALE

>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 STRRMKEALE 12
+TRR++EALE
Sbjct: 1167 TTRRLEEALE 1176


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EVSTRRMKEALE 12
E + RR+++ALE
Sbjct: 222 EQTVRRVQDALE 233


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EVSTRRMKEALE 12
E++ R+K+A+E
Sbjct: 138 EITLERLKQAIE 149


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EVSTRRMKEALE 12
EV R+KEAL+
Sbjct: 250 EVDEARIKEALK 261


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 1 EVSTRRMKEAL 11
E++TRR EA+
Sbjct: 341 EMTTRRAVEAI 351


>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 1 EVSTRRMKEALE 12
E +RMKEAL+
Sbjct: 272 ESVRKRMKEALQ 283


>sp|MER_ARCFU|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVSTRRMKEALE 12
E +RM+EA+E
Sbjct: 108 EKPLKRMREAVE 119


>sp|XERA_PYRAB|TYROSINE recombinase XerA|Pyrococcus abyssi (strain GE5 /

Query: 1 EVSTRRMKEALE 12
+VST+ +KEA++
Sbjct: 263 KVSTKHLKEAVK 274


>sp|HMGCS_HALVD|HYDROXYMETHYLGLUTARYL-COA synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 EVSTRRMKEALE 12
+V RM+EALE
Sbjct: 213 QVYLARMREALE 224


>sp|ILVC_SACI6|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.16.4

Query: 5 RRMKEALE 12
+RMKEAL+
Sbjct: 276 KRMKEALQ 283


>sp|ILVC_SACI4|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 5 RRMKEALE 12
+RMKEAL+
Sbjct: 276 KRMKEALQ 283


>sp|ILVC_SACI3|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 5 RRMKEALE 12
+RMKEAL+
Sbjct: 276 KRMKEALQ 283


>sp|ILVC_SACI7|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 5 RRMKEALE 12
+RMKEAL+
Sbjct: 276 KRMKEALQ 283


>sp|ILVC_SACI2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 5 RRMKEALE 12
+RMKEAL+
Sbjct: 276 KRMKEALQ 283


>sp|ILVC_SACI1|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 5 RRMKEALE 12
+RMKEAL+
Sbjct: 276 KRMKEALQ 283


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 1 EVSTRRMKEAL 11
E++TRR EA+
Sbjct: 341 EMTTRRAVEAI 351


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VSTRRMKEAL 11
V+ ++MKEAL
Sbjct: 324 VAKKKMKEAL 333


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 RRMKEALE 12
RRMK ALE
Sbjct: 68 RRMKLALE 75




THE END