LRRK2_HUMAN Blast Output
Archaea
1|Sequence|1|10|MASGSCQGCE

>sp|MBHJ_PYRFU|PROBABLE membrane-bound hydrogenase subunit mbhJ|Pyrococcus furiosus

Query: 3 SGSCQGCE 10
SGSC GC+
Sbjct: 32 SGSCNGCD 39


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 2 ASGSCQGCE 10
A+G C+GC+
Sbjct: 350 AAGDCEGCD 358


>sp|KPTA_METMA|PROBABLE RNA 2'-phosphotransferase|Methanosarcina mazei (strain ATCC

Query: 4 GSCQGCE 10
GSCQ C+
Sbjct: 14 GSCQQCK 20


>sp|KPTA_METAC|PROBABLE RNA 2'-phosphotransferase|Methanosarcina acetivorans (strain ATCC

Query: 4 GSCQGCE 10
GSCQ C+
Sbjct: 14 GSCQQCK 20


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 3 SGSCQGCE 10
+GSC+G E
Sbjct: 298 TGSCKGIE 305


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SGSCQGCE 10
+GSC+G E
Sbjct: 320 TGSCKGIE 327


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SGSCQGCE 10
+GSC+G E
Sbjct: 320 TGSCKGIE 327


>sp|FWDE_METJA|FERREDOXIN-TYPE protein FwdE|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MASGSCQGC 9
+A GSC GC
Sbjct: 100 IACGSCLGC 108


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 SGSCQGC 9
SG CQ C
Sbjct: 1010 SGRCQKC 1016


>sp|VORB_PYRHO|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus horikoshii (strain ATCC

Query: 5 SCQGC 9
+CQGC
Sbjct: 25 ACQGC 29


>sp|VORB_PYRFU|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus furiosus (strain ATCC

Query: 5 SCQGC 9
+CQGC
Sbjct: 25 ACQGC 29


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 5 SCQGC 9
+CQGC
Sbjct: 25 ACQGC 29


>sp|Y516_METJA|UNCHARACTERIZED protein MJ0516|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SGSCQGCE 10
+G C GC+
Sbjct: 18 TGGCNGCD 25


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 4 GSCQGC 9
G+C GC
Sbjct: 595 GACAGC 600


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5

Query: 2 ASGSCQGC 9
A G C GC
Sbjct: 63 AFGKCGGC 70


>sp|Y688_PYRIL|UPF0179 protein Pisl_0688|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GSCQGCE 10
G C+GC+
Sbjct: 96 GECKGCK 102


>sp|CHED2_METAC|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina acetivorans

Query: 5 SCQGCE 10
SCQ CE
Sbjct: 40 SCQSCE 45




2|Sequence|6|15|CQGCEEDEET

>sp|MTTB_METTE|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina thermophila

Query: 3 GCEEDEET 10
GCE DEET
Sbjct: 57 GCEVDEET 64


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 3 GCEEDEET 10
GCE DE+T
Sbjct: 57 GCEVDEKT 64


>sp|MTTB2_METMA|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GCEEDEET 10
GCE DE+T
Sbjct: 57 GCEVDEKT 64


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 3 GCEEDEET 10
GCE DE+T
Sbjct: 57 GCEVDEKT 64


>sp|MTTB1_METAC|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina acetivorans (strain ATCC

Query: 3 GCEEDEET 10
GCE DE+T
Sbjct: 57 GCEVDEKT 64


>sp|SUCD1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Archaeoglobus fulgidus (strain

Query: 5 EEDEET 10
EEDEET
Sbjct: 199 EEDEET 204


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GCEEDEET 10
GCE +E+T
Sbjct: 57 GCEVNEQT 64


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 3 GCEEDEET 10
GCE +E+T
Sbjct: 57 GCEVNEKT 64


>sp|SPEH_THEKO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus kodakarensis (strain ATCC

Query: 2 QGCEEDEET 10
+G EED+ET
Sbjct: 115 RGIEEDDET 123


>sp|Y2613_METAC|UNCHARACTERIZED serpin-like protein MA_2613/MA_2612|Methanosarcina acetivorans

Query: 1 CQGCEED 7
C GC ED
Sbjct: 13 CSGCLED 19


>sp|SPEH_PYRAB|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus abyssi (strain GE5 /

Query: 2 QGCEEDEET 10
+G EED+ET
Sbjct: 112 RGIEEDDET 120


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 1 CQGCEEDEET 10
QG +DEET
Sbjct: 403 AQGSGQDEET 412


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 QGCEED 7
+GC+ED
Sbjct: 115 EGCDED 120


>sp|SPEH_THEON|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus onnurineus (strain NA1)

Query: 2 QGCEEDEET 10
+G EED+ET
Sbjct: 112 RGIEEDDET 120


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 1 CQGCEED 7
C GCEE+
Sbjct: 66 CLGCEEN 72




3|Sequence|11|20|EDEETLKKLI

>sp|THSA_ARCFU|THERMOSOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EDEETLKKL 9
EDEETLKK+
Sbjct: 149 EDEETLKKI 157


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EDEETLKKLI 10
DEE LKKLI
Sbjct: 179 NDEEALKKLI 188


>sp|Y3044_PYRAE|DNA-BINDING protein PAE3044|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DEETLKKLI 10
DEETLKK++
Sbjct: 87 DEETLKKIL 95


>sp|THS_METKA|THERMOSOME subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 EDEETLKKL 9
+DEETLKK+
Sbjct: 151 DDEETLKKI 159


>sp|GMHA_METJA|PROBABLE phosphoheptose isomerase|Methanocaldococcus jannaschii (strain

Query: 1 EDEETLKKLI 10
EDEE LKK I
Sbjct: 20 EDEEKLKKAI 29


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 1 EDEETLKKLI 10
+DEET+K L+
Sbjct: 177 DDEETIKALV 186


>sp|RLME_METVS|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus vannielii (strain

Query: 2 DEETLKKL 9
DEETLKK+
Sbjct: 99 DEETLKKI 106


>sp|RL12_AERPE|LARGE ribosomal subunit protein P1|Aeropyrum pernix (strain ATCC 700893

Query: 2 DEETLKK 8
DEETLKK
Sbjct: 23 DEETLKK 29


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DEETLKKLI 10
DEETL+K+I
Sbjct: 824 DEETLEKII 832


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DEETLKKL 9
DEE LKKL
Sbjct: 363 DEEALKKL 370


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDEETLKKL 9
EDEE LKK+
Sbjct: 169 EDEEMLKKI 177


>sp|Y1309_METJA|UNCHARACTERIZED protein MJ1309|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DEETLKK 8
DEETLK+
Sbjct: 426 DEETLKE 432


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 2 DEETLKKLI 10
DEE LK+LI
Sbjct: 26 DEEKLKRLI 34


>sp|Y441_PYRIL|DNA-BINDING protein Pisl_0441|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DEETLKKLI 10
D+ETLKK++
Sbjct: 87 DDETLKKIL 95


>sp|RIBL_METJA|FAD synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DEETLKK 8
DEETLKK
Sbjct: 100 DEETLKK 106


>sp|RIBL_METVM|FAD synthase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 2 DEETLKK 8
DEETLKK
Sbjct: 106 DEETLKK 112


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EDEETLKKLI 10
ED++T+ KLI
Sbjct: 97 EDDDTVVKLI 106


>sp|ARGDC_PYRAE|ARGININE decarboxylase proenzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EDEETLKKLI 10
+DEE L+K++
Sbjct: 29 KDEERLRKIV 38


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii

Query: 2 DEETLKKLI 10
D+ET KKL+
Sbjct: 13 DDETFKKLL 21


>sp|LYSZ_CALMQ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Caldivirga

Query: 2 DEETLKKLI 10
DEETLK +
Sbjct: 63 DEETLKAYV 71


>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DEETLKKL 9
DEET KKL
Sbjct: 138 DEETAKKL 145


>sp|IF2A_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 3 EETLKKLI 10
EETLKK++
Sbjct: 228 EETLKKIV 235


>sp|PNPH_SACS2|PURINE nucleoside phosphorylase|Saccharolobus solfataricus (strain ATCC

Query: 1 EDEETLKK 8
EDEE +KK
Sbjct: 163 EDEEFVKK 170


>sp|IF1A_METKA|TRANSLATION initiation factor 1A|Methanopyrus kandleri (strain AV19 /

Query: 2 DEETLKKL 9
D+ETLKK+
Sbjct: 6 DDETLKKI 13


>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DEETLKKLI 10
D E LKKLI
Sbjct: 343 DSEILKKLI 351


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 2 DEETLKKLI 10
D+E LKKLI
Sbjct: 146 DKEKLKKLI 154


>sp|Y476_PYRFU|PROTEIN PF0476|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EDEETLKKLI 10
+DE+T+KK +
Sbjct: 229 QDEDTIKKAV 238


>sp|SYFA_PYRAE|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DEETLKKLI 10
DEET KK++
Sbjct: 120 DEETYKKIV 128




4|Sequence|16|25|LKKLIVRLNN

>sp|TRMBR_THELN|HTH-TYPE sugar sensing transcriptional regulator|Thermococcus litoralis

Query: 1 LKKLIVRLNN 10
+KKL + LNN
Sbjct: 92 MKKLEIELNN 101


>sp|TRMBR_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 1 LKKLIVRLNN 10
+KKL + LNN
Sbjct: 92 MKKLEIELNN 101


>sp|FOLD_PYRIL|BIFUNCTIONAL protein FolD|Pyrobaculum islandicum (strain DSM 4184

Query: 3 KLIVRLNN 10
KLI RLNN
Sbjct: 86 KLIERLNN 93


>sp|BIOB_METJA|BIOTIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKKLIVRLNN 10
LKKL VR++N
Sbjct: 188 LKKLDVRIHN 197




5|Sequence|21|30|VRLNNVQEGK

>sp|GLCDH_METAR|GLUCOSE 1-dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VRLNNVQEG 9
VRL NV+EG
Sbjct: 335 VRLENVKEG 343


>sp|THI4_SULTO|THIAMINE thiazole synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VRLNNVQEG 9
++LN V+EG
Sbjct: 97 IKLNKVEEG 105


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 RLNNVQEGK 10
++ NVQEG+
Sbjct: 288 KIKNVQEGR 296


>sp|THI4_SACI7|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VRLNNVQEG 9
VRL V+EG
Sbjct: 94 VRLKEVEEG 102


>sp|THI4_SACI6|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VRLNNVQEG 9
VRL V+EG
Sbjct: 94 VRLKEVEEG 102


>sp|THI4_SACI3|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 VRLNNVQEG 9
VRL V+EG
Sbjct: 94 VRLKEVEEG 102


>sp|THI4_SACI2|THIAMINE thiazole synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VRLNNVQEG 9
VRL V+EG
Sbjct: 94 VRLKEVEEG 102


>sp|THI4_SACI1|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VRLNNVQEG 9
VRL V+EG
Sbjct: 94 VRLKEVEEG 102


>sp|THI4_SACI4|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VRLNNVQEG 9
VRL V+EG
Sbjct: 94 VRLKEVEEG 102


>sp|CHED_PYRHO|PROBABLE chemoreceptor glutamine deamidase CheD|Pyrococcus horikoshii

Query: 1 VRLNNVQEGK 10
VR+ V EGK
Sbjct: 147 VRMRKVTEGK 156




6|Sequence|26|35|VQEGKQIETL

>sp|Y1533_SACS2|PUTATIVE dioxygenase SSO1533|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EGKQIE 8
EGKQIE
Sbjct: 170 EGKQIE 175


>sp|IPYR_METTH|INORGANIC pyrophosphatase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 EGKQIETL 10
EGK+ ETL
Sbjct: 144 EGKKTETL 151


>sp|IPYR_HALVD|INORGANIC pyrophosphatase|Haloferax volcanii (strain ATCC 29605

Query: 1 VQEGKQIETL 10
++ GK++ETL
Sbjct: 144 LEAGKEVETL 153




7|Sequence|31|40|QIETLVQILE

>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QIETLVQIL 9
QIETL QIL
Sbjct: 44 QIETLAQIL 52


>sp|CDC6_PYRFU|ORC1-TYPE DNA replication protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QIETLVQIL 9
QIETL QIL
Sbjct: 45 QIETLAQIL 53


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QIETLVQILE 10
QI+T+V +LE
Sbjct: 384 QIDTVVDVLE 393


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 1 QIETLVQIL 9
QIE L QIL
Sbjct: 44 QIEALAQIL 52




8|Sequence|36|45|VQILEDLLVF

>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 QILEDLLV 9
+ILEDLLV
Sbjct: 610 RILEDLLV 617


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 QILEDLLV 9
++LEDLLV
Sbjct: 527 KVLEDLLV 534


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 LEDLLVF 10
LED+LVF
Sbjct: 79 LEDILVF 85


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LEDLLVF 10
LED+LVF
Sbjct: 79 LEDILVF 85


>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM 5456

Query: 2 QILEDLLVF 10
QIL D+LV+
Sbjct: 142 QILYDILVY 150


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LEDLLVF 10
LED+LVF
Sbjct: 87 LEDILVF 93


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LEDLLVF 10
LED+LVF
Sbjct: 81 LEDILVF 87


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VQILEDLLV 9
+++LEDL+V
Sbjct: 239 MELLEDLIV 247


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 4 LEDLLVF 10
LED+LVF
Sbjct: 91 LEDILVF 97




9|Sequence|41|50|DLLVFTYSER

>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 3 LVFTYSER 10
LVFTYS R
Sbjct: 250 LVFTYSRR 257


>sp|KUP_METHJ|PROBABLE potassium transport system protein|Methanospirillum hungatei JF-1

Query: 2 LLVFTYSER 10
LL+F YSER
Sbjct: 361 LLIFQYSER 369


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DLLVFTYSE 9
D++VF YS+
Sbjct: 81 DVVVFAYSD 89


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 3 LVFTYSER 10
L+FTYS +
Sbjct: 435 LIFTYSRK 442


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 VFTYSE 9
+FTYSE
Sbjct: 199 IFTYSE 204




10|Sequence|46|55|TYSERASKLF

>sp|PHEA_METJA|PREPHENATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TYSERASKLF 10
TYSE+A+K F
Sbjct: 13 TYSEKATKKF 22


>sp|RL22_HALWD|LARGE ribosomal subunit protein uL22|Haloquadratum walsbyi (strain DSM

Query: 2 YSERASKLF 10
Y E+ASK F
Sbjct: 81 YPEKASKAF 89


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TYSERASKLF 10
+YSE A KLF
Sbjct: 704 SYSEFAEKLF 713


>sp|RL22_HALMA|LARGE ribosomal subunit protein uL22|Haloarcula marismortui (strain

Query: 2 YSERASKLF 10
Y E+ASK F
Sbjct: 81 YPEKASKAF 89


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 TYSERASKLF 10
+Y+E SKLF
Sbjct: 602 SYAEEMSKLF 611


>sp|THI4_SACS2|THIAMINE thiazole synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YSERASKL 9
YSERA +L
Sbjct: 203 YSERAEEL 210


>sp|THI4_SACI7|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YSERASKL 9
YSERA +L
Sbjct: 203 YSERAEEL 210


>sp|THI4_SACI6|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YSERASKL 9
YSERA +L
Sbjct: 203 YSERAEEL 210


>sp|THI4_SACI3|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.27)

Query: 2 YSERASKL 9
YSERA +L
Sbjct: 203 YSERAEEL 210


>sp|THI4_SACI2|THIAMINE thiazole synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YSERASKL 9
YSERA +L
Sbjct: 203 YSERAEEL 210


>sp|REG6_PYRFU|HTH-TYPE transcriptional regulator FL11|Pyrococcus furiosus (strain ATCC

Query: 2 YSERASKL 9
YSE ASKL
Sbjct: 80 YSEVASKL 87


>sp|THI4_SACI4|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YSERASKL 9
YSERA +L
Sbjct: 203 YSERAEEL 210


>sp|THI4_SACI1|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YSERASKL 9
YSERA +L
Sbjct: 203 YSERAEEL 210


>sp|SODF_METTM|SUPEROXIDE dismutase [Fe]|Methanothermobacter marburgensis (strain ATCC

Query: 1 TYSERASKLF 10
TY +R +LF
Sbjct: 133 TYCQRTDRLF 142


>sp|SODF_METTH|SUPEROXIDE dismutase [Fe]|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 TYSERASKLF 10
TY +R +LF
Sbjct: 136 TYCQRTDRLF 145


>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 2 YSERASKL 9
Y++RASK+
Sbjct: 120 YAQRASKI 127




11|Sequence|51|60|ASKLFQGKNI

>sp|Y505_METJA|UNCHARACTERIZED protein MJ0505|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ASKLFQGKNI 10
A KLF G+NI
Sbjct: 157 AEKLFLGRNI 166


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KLFQGKNI 10
K+F GKN+
Sbjct: 36 KVFSGKNL 43




12|Sequence|56|65|QGKNIHVPLL

>sp|ASPD_METHJ|L-ASPARTATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QGKNIHVP 8
QGK IH+P
Sbjct: 109 QGKKIHIP 116


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain

Query: 1 QGKNIHVPL 9
QG N+H PL
Sbjct: 72 QGGNLHAPL 80


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain

Query: 2 GKNIHVPL 9
G NIHVP
Sbjct: 42 GNNIHVPF 49


>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 1 QGKNIHVPLL 10
+G ++H+PLL
Sbjct: 151 RGYHVHLPLL 160


>sp|PFDA2_THEKO|PREFOLDIN subunit alpha 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QGKNIHVPL 9
+GK I++PL
Sbjct: 56 KGKEIYIPL 64


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 QGKNIHVPLL 10
+ +IHVP+L
Sbjct: 377 EAASIHVPIL 386


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GKNIHVPLL 10
GK I VPL
Sbjct: 236 GKEIEVPLF 244


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 3 KNIHVP 8
+NIHVP
Sbjct: 257 ENIHVP 262


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 1 QGKNIHVPLL 10
+ IHVP+L
Sbjct: 381 EAAGIHVPIL 390


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 1 QGKNIHVPLL 10
+ IHVP+L
Sbjct: 382 EAAGIHVPIL 391


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 1 QGKNIHVPLL 10
+ IHVP+L
Sbjct: 381 EAAGIHVPIL 390


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 1 QGKNIHVPLL 10
+ IHVP+L
Sbjct: 381 EAAGIHVPIL 390


>sp|GGGPS_METMA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KNIHVPLL 10
+NIHVP +
Sbjct: 69 ENIHVPTI 76


>sp|DFX_ARCFU|DESULFOFERRODOXIN homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QGKNIHVPLL 10
+GK HVP++
Sbjct: 44 EGKEKHVPVI 53


>sp|DAPH_METKA|2,3,4,5-TETRAHYDROPYRIDINE-2,6-DICARBOXYLATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 GKNIHV 7
GKN+H+
Sbjct: 152 GKNVHI 157


>sp|DPHB_STAMF|DIPHTHINE synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 QGKNIH 6
+GKNIH
Sbjct: 64 EGKNIH 69


>sp|CDPAS_PYRCJ|CDP-ARCHAEOL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 KNIHVPLL 10
+ +H+PLL
Sbjct: 130 RELHIPLL 137


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 2 GKNIHVPLL 10
GK IH P L
Sbjct: 168 GKRIHRPAL 176




13|Sequence|61|70|HVPLLIVLDS

>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VPLLIVLDS 10
+P+ I+LDS
Sbjct: 382 IPMFIILDS 390


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 1 HVPLLIVLDS 10
H+P +++LDS
Sbjct: 238 HLPRVVILDS 247


>sp|CDC62_ARCFU|ORC1-TYPE DNA replication protein 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PLLIVLD 9
PLL+VLD
Sbjct: 142 PLLVVLD 148


>sp|RS4E_NATPD|SMALL ribosomal subunit protein eS4|Natronomonas pharaonis (strain ATCC

Query: 2 VPLLIVL 8
VPLLIVL
Sbjct: 37 VPLLIVL 43


>sp|RS4E_HALMA|SMALL ribosomal subunit protein eS4|Haloarcula marismortui (strain ATCC

Query: 2 VPLLIVL 8
VPLLIVL
Sbjct: 37 VPLLIVL 43


>sp|TRM56_HALWD|TRNA (cytidine(56)-2'-O)-methyltransferase|Haloquadratum walsbyi (strain

Query: 1 HVPLLIVL 8
H PLLI++
Sbjct: 107 HQPLLIII 114




14|Sequence|66|75|IVLDSYMRVA

>sp|Y726_METJA|UNCHARACTERIZED protein MJ0726|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VLDSYMRV 9
++D+YM+V
Sbjct: 137 IIDAYMKV 144


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IVLDSYMRV 9
I+L+ Y+RV
Sbjct: 259 IILEGYVRV 267


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 1 IVLDSYMRVA 10
+++DSY+R A
Sbjct: 732 VLIDSYLRNA 741


>sp|PELO_PYRCJ|PROTEIN pelota homolog|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IVLDSYMR 8
++LD+YM+
Sbjct: 280 LILDTYMK 287


>sp|PELO_PYRNV|PROTEIN pelota homolog|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 IVLDSYMR 8
+VLDSY++
Sbjct: 278 LVLDSYIK 285




15|Sequence|71|80|YMRVASVQQV

***** No hits found ******


16|Sequence|76|85|SVQQVGWSLL

>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 QQVGWSLL 10
+QVGW LL
Sbjct: 299 KQVGWDLL 306


>sp|YPV8_METTF|UNCHARACTERIZED protein ORF8|Methanothermobacter thermautotrophicus

Query: 3 QQVGW 7
QQVGW
Sbjct: 294 QQVGW 298


>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM

Query: 2 VQQVGWSL 9
+QQ+ WS+
Sbjct: 21 IQQIDWSI 28


>sp|HIS3_METMP|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SVQQVGWS 8
+V+Q GW+
Sbjct: 94 TVEQTGWA 101


>sp|HIS3_METM7|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 SVQQVGWS 8
+V+Q GW+
Sbjct: 94 TVEQTGWA 101


>sp|HIS3_METM6|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus maripaludis (strain C6 /

Query: 1 SVQQVGWS 8
+V+Q GW+
Sbjct: 94 TVEQTGWA 101


>sp|HIS3_METM5|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 SVQQVGWS 8
+V+Q GW+
Sbjct: 94 TVEQTGWA 101


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 4 QVGWSLL 10
++GW LL
Sbjct: 435 EIGWDLL 441


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 QVGWSLL 10
++GW LL
Sbjct: 434 EIGWDLL 440




17|Sequence|81|90|GWSLLCKLIE

>sp|PUR5_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GWSLLCKLIE 10
G+SL+ KLIE
Sbjct: 181 GYSLVRKLIE 190


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 2 WSLLCKLIE 10
W+L+C++++
Sbjct: 369 WNLVCRVLK 377


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 GWSLLCKLIE 10
GW + KLIE
Sbjct: 430 GWENVLKLIE 439


>sp|TRUA_METMP|TRNA pseudouridine synthase A|Methanococcus maripaludis (strain DSM

Query: 2 WSLLCKLIE 10
W L CK IE
Sbjct: 85 WVLGCKKIE 93


>sp|FLUC2_METAC|FLUORIDE-SPECIFIC ion channel FluC 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LLCKLIE 10
LLC+L+E
Sbjct: 27 LLCELVE 33


>sp|AMPK_PYRFU|LYSYL aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WSLLCKLIE 10
W L+ K+IE
Sbjct: 4 WELMKKIIE 12


>sp|PUR5_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GWSLLCKLIE 10
G+SL+ KLI+
Sbjct: 177 GYSLIRKLID 186




18|Sequence|86|95|CKLIEVCPGT

>sp|RNH2_PYRNV|RIBONUCLEASE HII|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KLIEVCPG 9
KLIE+CP
Sbjct: 91 KLIELCPA 98


>sp|Y1188_METJA|UNCHARACTERIZED protein MJ1188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CKLIEVCPG 9
CKLI + PG
Sbjct: 100 CKLITIHPG 108


>sp|TBP_THEON|TATA-BOX-BINDING protein|Thermococcus onnurineus (strain NA1)

Query: 2 KLIEVCPGT 10
K+IE+CP +
Sbjct: 28 KVIEICPNS 36


>sp|TBP_THEKO|TATA-BOX-BINDING protein|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KLIEVCPGT 10
K+IE+CP +
Sbjct: 28 KVIEICPSS 36


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KLIEVCPGT 10
KLIEVC T
Sbjct: 277 KLIEVCSTT 285


>sp|TBP_THESM|TATA-BOX-BINDING protein|Thermococcus sibiricus (strain DSM 12597

Query: 2 KLIEVCP 8
K+IE+CP
Sbjct: 25 KVIEICP 31


>sp|FEN_METB6|FLAP endonuclease 1|Methanoregula boonei (strain DSM 21154

Query: 2 KLIEVCPG 9
KL E CPG
Sbjct: 260 KLAEKCPG 267


>sp|RNH2_PYRIL|RIBONUCLEASE HII|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KLIEVCPG 9
+LIE+CP
Sbjct: 88 RLIELCPA 95


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KLIEVCPG 9
KL+E+ PG
Sbjct: 105 KLVEIAPG 112


>sp|DGGGP_HALSA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LIEVCPG 9
L+ VCPG
Sbjct: 229 LVAVCPG 235


>sp|DGGGP_HALS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 LIEVCPG 9
L+ VCPG
Sbjct: 229 LVAVCPG 235


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KLIEVCPG 9
KLIE+ PG
Sbjct: 105 KLIELAPG 112


>sp|CBSA_SULAC|CYTOCHROME b558/566 subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KLIEVCPGT 10
++IE+ PGT
Sbjct: 129 RMIELTPGT 137


>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 2 KLIEVCPG 9
K +EVCPG
Sbjct: 204 KCVEVCPG 211


>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CKLIEVCPG 9
CK ++VC G
Sbjct: 359 CKWLDVCNG 367


>sp|GCH31_HALSA|GTP cyclohydrolase III 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 LIEVCPG 9
+I VCPG
Sbjct: 191 IIAVCPG 197


>sp|CBID_THEVO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KLIEVCPG 9
K+I +CPG
Sbjct: 211 KIIVLCPG 218


>sp|TRUA_METKA|TRNA pseudouridine synthase A|Methanopyrus kandleri (strain AV19 /

Query: 1 CKLIEVCP 8
C+L+E+ P
Sbjct: 148 CELVEITP 155


>sp|VHUB_METJA|POLYFERREDOXIN protein VhuB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KLIEVCPG 9
K +EVCPG
Sbjct: 215 KCVEVCPG 222


>sp|PIMT_PYRAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 CKLIEVCPG 9
C+LIE PG
Sbjct: 65 CELIEPRPG 73


>sp|PIMT_PYRCJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CKLIEVCPG 9
C+LIE PG
Sbjct: 65 CELIEPRPG 73


>sp|PIMT_PYRAE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CKLIEVCPG 9
C+LIE PG
Sbjct: 65 CELIEPRPG 73


>sp|Y071_PYRHO|UPF0215 protein PH0071|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KLIEVCPG 9
KL+E+ PG
Sbjct: 137 KLVELIPG 144


>sp|PIMT_PYRNV|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 CKLIEVCPG 9
C+L+E PG
Sbjct: 65 CELVEPKPG 73




19|Sequence|91|100|VCPGTMQSLM

>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 VCPGTMQSLM 10
+C G+MQ+L+
Sbjct: 349 ICGGSMQNLL 358




20|Sequence|96|105|MQSLMGPQDV

>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 4 LMGPQDV 10
LMGPQ V
Sbjct: 379 LMGPQGV 385




21|Sequence|101|110|GPQDVGNDWE

>sp|GFCR_METTP|TRANSCRIPTIONAL regulator GfcR|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GPQDVGNDW 9
GP+D+ DW
Sbjct: 49 GPKDISVDW 57


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 1 GPQDVGNDWE 10
GP+DV WE
Sbjct: 174 GPEDVPKAWE 183


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 1 GPQDVGNDWE 10
GP+D+ WE
Sbjct: 174 GPEDIPKAWE 183


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 1 GPQDVGNDWE 10
GP+D+ WE
Sbjct: 174 GPEDIPKAWE 183


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 1 GPQDVGNDWE 10
GP+D+ WE
Sbjct: 174 GPEDIPKAWE 183


>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii (strain

Query: 2 PQDVGNDW 9
P+DV DW
Sbjct: 464 PEDVIKDW 471


>sp|TDXH_PYRFU|PEROXIREDOXIN furiosus (strain ATCC 43587

Query: 2 PQDVGNDWE 10
P +VG DW+
Sbjct: 139 PAEVGRDWD 147


>sp|TDXH_PYRAB|PEROXIREDOXIN abyssi (strain GE5 /

Query: 2 PQDVGNDWE 10
P +VG DW+
Sbjct: 139 PAEVGRDWD 147


>sp|TDXH_PYRHO|PEROXIREDOXIN horikoshii (strain ATCC 700860

Query: 2 PQDVGNDWE 10
P +VG DW+
Sbjct: 139 PAEVGRDWD 147


>sp|ICMT_METAC|PROTEIN-S-ISOPRENYLCYSTEINE O-methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 QDVGNDW 9
+D+GN+W
Sbjct: 97 KDLGNNW 103


>sp|TDXH_THEKO|PEROXIREDOXIN kodakarensis (strain ATCC BAA-918

Query: 2 PQDVGNDWE 10
P +VG DW+
Sbjct: 139 PAEVGRDWD 147


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 2 PQDVGN 7
P+DVGN
Sbjct: 309 PEDVGN 314


>sp|GFCR2_METAC|TRANSCRIPTIONAL regulator GfcR 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GPQDVGNDW 9
P+D+ DW
Sbjct: 50 APKDISVDW 58


>sp|SECD_METTH|PROTEIN-EXPORT membrane protein SecD|Methanothermobacter thermautotrophicus

Query: 2 PQDVGNDWE 10
P GN+WE
Sbjct: 130 PIITGNEWE 138


>sp|GFCR_METLZ|TRANSCRIPTIONAL regulator GfcR|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GPQDVGNDW 9
P+DV DW
Sbjct: 48 APKDVHIDW 56


>sp|GFCR_METMJ|TRANSCRIPTIONAL regulator GfcR|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GPQDVGNDW 9
P+DV DW
Sbjct: 47 APKDVHIDW 55


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 QDVGNDW 9
Q++G DW
Sbjct: 82 QEIGKDW 88


>sp|GFCR_METPE|TRANSCRIPTIONAL regulator GfcR|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GPQDVGNDW 9
P+DV DW
Sbjct: 47 APKDVHIDW 55


>sp|GFCR_METB6|TRANSCRIPTIONAL regulator GfcR|Methanoregula boonei (strain DSM 21154

Query: 1 GPQDVGNDW 9
P+DV DW
Sbjct: 48 APKDVHIDW 56


>sp|GFCR_METHJ|TRANSCRIPTIONAL regulator GfcR|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PQDVGNDW 9
P+DV DW
Sbjct: 48 PKDVHIDW 55


>sp|GFCR_HALMA|TRANSCRIPTIONAL regulator GfcR|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPQDVGNDW 9
GP D+ DW
Sbjct: 55 GPHDIHVDW 63


>sp|Y1065_METJA|UNCHARACTERIZED protein MJ1065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPQDVGNDWE 10
G D+G WE
Sbjct: 143 GMSDIGEIWE 152


>sp|Y3591_METAC|PROTEIN MA_3591|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GPQDVGND 8
GP+D G D
Sbjct: 29 GPRDAGTD 36


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 5 VGNDWE 10
VGN+W+
Sbjct: 104 VGNEWK 109


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PQDVGNDW 9
P D G DW
Sbjct: 418 PGDRGKDW 425


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PQDVGNDW 9
P D G DW
Sbjct: 418 PGDRGKDW 425


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 1 GPQDVGNDW 9
GP++ G +W
Sbjct: 319 GPRNDGENW 327


>sp|GFCR_HALVD|TRANSCRIPTIONAL regulator GfcR|Haloferax volcanii (strain ATCC 29605

Query: 1 GPQDVGNDW 9
GP D+ DW
Sbjct: 56 GPDDIHVDW 64




22|Sequence|106|115|GNDWEVLGVH

>sp|PYRK_METAR|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocella arvoryzae

Query: 1 GNDWEVLG 8
GN WE++G
Sbjct: 85 GNGWEIVG 92


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DWEVLGV 9
DWE LG+
Sbjct: 93 DWETLGI 99


>sp|SECD_METTH|PROTEIN-EXPORT membrane protein SecD|Methanothermobacter thermautotrophicus

Query: 1 GNDWEV 6
GN+WEV
Sbjct: 134 GNEWEV 139


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 1 GNDWE 5
GNDWE
Sbjct: 271 GNDWE 275


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 3 DWEVLGV 9
DWE LGV
Sbjct: 275 DWERLGV 281


>sp|G1PDH_PICTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Picrophilus torridus (strain ATCC 700027

Query: 1 GNDWEVL 7
G DWE+L
Sbjct: 283 GGDWELL 289


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC

Query: 3 DWEVLGV 9
+WEVLG+
Sbjct: 90 EWEVLGL 96


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 GNDWEV 6
GN WEV
Sbjct: 130 GNKWEV 135


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 WEVLGV 9
WE+LGV
Sbjct: 258 WEILGV 263


>sp|Y2154_ARCFU|UPF0179 protein AF_2154|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GNDWEVLGV 9
G DW +GV
Sbjct: 13 GKDWAKIGV 21


>sp|AROD_THEON|3-DEHYDROQUINATE dehydratase|Thermococcus onnurineus (strain NA1)

Query: 4 WEVLGV 9
WE+LGV
Sbjct: 121 WELLGV 126


>sp|GGR_ARCFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GNDWEV 6
G DWEV
Sbjct: 138 GEDWEV 143


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain

Query: 3 DWEVLGV 9
DWE LG+
Sbjct: 2 DWEKLGL 8


>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GNDWEVL 7
G+DW+V+
Sbjct: 126 GDDWKVI 132


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DWEVLGV 9
DWE LG+
Sbjct: 90 DWEELGL 96


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 3 DWEVLGV 9
DWE LG+
Sbjct: 90 DWERLGL 96


>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 3 DWEVL 7
DWEVL
Sbjct: 61 DWEVL 65


>sp|GFPS_AERPX|GERANYLFARNESYL diphosphate synthase|Aeropyrum pernix

Query: 1 GNDWEVLG 8
G+DW +L
Sbjct: 92 GDDWAILA 99


>sp|NADM_HALSA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GNDWEVL 7
G+DWE L
Sbjct: 137 GDDWESL 143


>sp|NADM_HALS3|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GNDWEVL 7
G+DWE L
Sbjct: 137 GDDWESL 143


>sp|YJ2B_PYRHO|UPF0147 protein PH1921.2|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 WEVLG 8
WEVLG
Sbjct: 83 WEVLG 87


>sp|Y239_PYRFU|UPF0147 protein PF0239|Pyrococcus furiosus (strain ATCC 43587

Query: 4 WEVLG 8
WEVLG
Sbjct: 83 WEVLG 87


>sp|Y2131_THEKO|UPF0147 protein TK2131|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 WEVLG 8
WEVLG
Sbjct: 73 WEVLG 77


>sp|Y1698_PYRAB|UPF0147 protein PYRAB16980|Pyrococcus abyssi (strain GE5 /

Query: 4 WEVLG 8
WEVLG
Sbjct: 76 WEVLG 80


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 4 WEVLGV 9
WE LGV
Sbjct: 127 WETLGV 132


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 1 GNDWEVL 7
G DW VL
Sbjct: 450 GEDWRVL 456


>sp|PYRF_METTE|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina thermophila

Query: 1 GNDWEVLG 8
G DW ++G
Sbjct: 180 GTDWVIVG 187


>sp|HIS6_IGNH4|IMIDAZOLE glycerol phosphate synthase subunit|Ignicoccus hospitalis (strain

Query: 1 GNDWEV 6
GN WEV
Sbjct: 136 GNGWEV 141


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GNDWEVLG 8
G DW VLG
Sbjct: 58 GRDWLVLG 65


>sp|DHQS_METTP|3-DEHYDROQUINATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GNDWEVL 7
G DW+V+
Sbjct: 113 GTDWKVI 119


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 GNDWEVLGVH 10
G D E LGV+
Sbjct: 261 GEDLEALGVN 270


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 GNDWEVLGVH 10
G D E LGV+
Sbjct: 261 GEDLEALGVN 270


>sp|Y1519_METMJ|UPF0280 protein Memar_1519|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GNDWEVLG 8
G+DW+ G
Sbjct: 234 GSDWQYYG 241


>sp|NADM_METM7|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 GNDWEVL 7
G+DWE L
Sbjct: 136 GSDWEHL 142


>sp|DHQS_NATPD|3-DEHYDROQUINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GNDWEVL 7
G+DW+++
Sbjct: 139 GDDWQII 145


>sp|AGL7_HALVD|LOW-SALT glycan biosynthesis sulfotransferase Agl7|Haloferax volcanii

Query: 1 GNDWEVLG 8
G DWE G
Sbjct: 358 GRDWEKFG 365


>sp|MTSA_METMA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GNDWEVLG 8
GND +LG
Sbjct: 271 GNDMSILG 278


>sp|DHQS_METMA|3-DEHYDROQUINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GNDWEVL 7
G DW+V+
Sbjct: 131 GTDWKVI 137


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GNDWEVL 7
G DW++L
Sbjct: 299 GGDWDLL 305


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GNDWEVL 7
G DW++L
Sbjct: 299 GGDWDLL 305


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 GNDWEVL 7
G DW++L
Sbjct: 299 GGDWDLL 305


>sp|DHQS_METBF|3-DEHYDROQUINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GNDWEVL 7
G DW+V+
Sbjct: 131 GTDWKVI 137


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GNDWEVL 7
G DW++L
Sbjct: 299 GGDWDLL 305


>sp|DHQS_METAC|3-DEHYDROQUINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GNDWEVL 7
G DW+V+
Sbjct: 131 GTDWKVI 137


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GNDWEVL 7
G DW++L
Sbjct: 299 GGDWDLL 305


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GNDWEVL 7
G DW++L
Sbjct: 299 GGDWDLL 305


>sp|MRE11_PYRHO|DNA double-strand break repair protein|Pyrococcus horikoshii (strain

Query: 1 GNDWEVLGVH 10
GN W V GV+
Sbjct: 125 GNYWLVKGVY 134


>sp|PROF_ODILC|ODIN profilin|Odinarchaeota yellowstonii (strain LCB_4)

Query: 3 DWEVLGVH 10
+W V GVH
Sbjct: 33 NWSVDGVH 40


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 2 NDWEVLG 8
N W+++G
Sbjct: 170 NSWQIIG 176




23|Sequence|111|120|VLGVHQLILK

>sp|SURE_METMP|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain DSM 14266

Query: 1 VLGVHQLILK 10
VLGVHQ++ K
Sbjct: 78 VLGVHQVLKK 87


>sp|SURE_METM6|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C6 /

Query: 1 VLGVHQLILK 10
VLGVHQ++ K
Sbjct: 80 VLGVHQVLKK 89


>sp|SURE_METM5|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C5 /

Query: 1 VLGVHQLILK 10
VLGVHQ++ K
Sbjct: 80 VLGVHQVLKK 89


>sp|SURE_METM7|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C7 /

Query: 1 VLGVHQLILK 10
VLG+HQ++ K
Sbjct: 80 VLGIHQVLKK 89




24|Sequence|116|125|QLILKMLTVH

***** No hits found ******


25|Sequence|121|130|MLTVHNASVN

>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LTVHNASVN 10
LTVH SVN
Sbjct: 1142 LTVHQGSVN 1150


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LTVHNASVN 10
LTVH SVN
Sbjct: 2233 LTVHEGSVN 2241


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 2 LTVHNASVN 10
LTVH SVN
Sbjct: 1314 LTVHEGSVN 1322


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 LTVHNASVN 10
LTVH SVN
Sbjct: 1339 LTVHEGSVN 1347


>sp|THIE_METMA|THIAMINE-PHOSPHATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LTVHNA 7
LTVHNA
Sbjct: 132 LTVHNA 137




26|Sequence|126|135|NASVNLSVIG

***** No hits found ******


27|Sequence|131|140|LSVIGLKTLD

>sp|UPPP_PYRIL|UNDECAPRENYL-DIPHOSPHATASE islandicum (strain DSM 4184

Query: 2 SVIGLKTLD 10
SV GLKT D
Sbjct: 136 SVAGLKTFD 144


>sp|MCRC_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 4 IGLKTLD 10
IG+KTLD
Sbjct: 150 IGIKTLD 156




28|Sequence|136|145|LKTLDLLLTS

>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 1 LKTLDLLLTS 10
LKT+D+L S
Sbjct: 148 LKTIDILANS 157




29|Sequence|141|150|LLLTSGKITL

>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 2 LLTSGKITL 10
+L SGKITL
Sbjct: 318 VLRSGKITL 326


>sp|G1PDH_METLZ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocorpusculum labreanum (strain ATCC

Query: 1 LLLTSGKITL 10
LLL SGK TL
Sbjct: 49 LLLLSGKTTL 58


>sp|PYRE_SULTO|OROTATE phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 1 LLLTSGKIT 9
+LTSGKI+
Sbjct: 18 FVLTSGKIS 26


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 LLLTSGKITL 10
LL+ GK+TL
Sbjct: 81 LLVEKGKVTL 90


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 LLLTSGKIT 9
+L TSG+IT
Sbjct: 397 ILATSGRIT 405


>sp|Y420_METJA|UNCHARACTERIZED protein MJ0420|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLTSGKITL 10
+LT GKITL
Sbjct: 270 ILTLGKITL 278


>sp|Y1566_METJA|UNCHARACTERIZED protein MJ1566|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLLTSGK 7
LLLTSGK
Sbjct: 397 LLLTSGK 403


>sp|Y215_METTH|UNCHARACTERIZED protein MTH_215|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LLLTSGKIT 9
LLT+G+IT
Sbjct: 156 FLLTAGEIT 164




30|Sequence|146|155|GKITLLILDE

>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 1 GKITLLILDE 10
GKI LLILDE
Sbjct: 816 GKIPLLILDE 825


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 1 GKITLLILDE 10
G+I+LLILDE
Sbjct: 813 GEISLLILDE 822


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain ATCC

Query: 1 GKITLLILDE 10
GK+ LLILDE
Sbjct: 811 GKVDLLILDE 820


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 1 GKITLLILDE 10
G+I+LLILDE
Sbjct: 814 GEISLLILDE 823


>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 1 GKITLLILDE 10
G+I LLILDE
Sbjct: 812 GRIDLLILDE 821


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 GKITLLILDE 10
GK TL++LDE
Sbjct: 96 GKRTLIVLDE 105


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 GKITLLILDE 10
GK TL++LDE
Sbjct: 96 GKRTLIVLDE 105


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 GKITLLILDE 10
GK TL++LDE
Sbjct: 96 GKRTLIVLDE 105


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKITLLILDE 10
GK+ L+ILDE
Sbjct: 103 GKLKLIILDE 112


>sp|Y1200_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB12000|Pyrococcus abyssi (strain GE5 /

Query: 1 GKITLLILDE 10
G+I +LILDE
Sbjct: 117 GRIPVLILDE 126


>sp|RRP41_METKA|EXOSOME complex component Rrp41|Methanopyrus kandleri (strain AV19 /

Query: 1 GKITLLILD 9
GKITLL +D
Sbjct: 194 GKITLLQMD 202


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 GKITLLILDE 10
G+ TL++LDE
Sbjct: 96 GRRTLIVLDE 105


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 GKITLLILDE 10
G+ TL++LDE
Sbjct: 96 GRRTLIVLDE 105


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii (strain

Query: 1 GKITLLILDE 10
GK LLI+DE
Sbjct: 259 GKFELLIIDE 268


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 4 TLLILDE 10
T+LILDE
Sbjct: 378 TMLILDE 384


>sp|PELO_NATPD|PROTEIN pelota homolog|Natronomonas pharaonis (strain ATCC 35678

Query: 4 TLLILDE 10
TLLILDE
Sbjct: 291 TLLILDE 297


>sp|Y541_PYRHO|UNCHARACTERIZED ATP-binding protein PH0541|Pyrococcus horikoshii (strain ATCC

Query: 1 GKITLLILDE 10
GK+ +L+ DE
Sbjct: 129 GKMPILVFDE 138


>sp|PELO_HALMA|PROTEIN pelota homolog|Haloarcula marismortui (strain ATCC 43049

Query: 4 TLLILDE 10
TLL+LDE
Sbjct: 291 TLLVLDE 297


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter thermautotrophicus

Query: 1 GKITLLILDE 10
GKIT+ LDE
Sbjct: 1047 GKITVKSLDE 1056


>sp|CDC62_THEAC|ORC1-TYPE DNA replication protein 2|Thermoplasma acidophilum (strain ATCC

Query: 1 GKITLLILDE 10
GK ++ILDE
Sbjct: 135 GKFFIIILDE 144


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 3 ITLLILDE 10
ITL+++DE
Sbjct: 135 ITLVVIDE 142


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 4 TLLILDE 10
TLL+LDE
Sbjct: 299 TLLVLDE 305


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 4 TLLILDE 10
TLL+LDE
Sbjct: 298 TLLVLDE 304


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 TLLILDE 10
TLL+LDE
Sbjct: 299 TLLVLDE 305


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 4 TLLILDE 10
TLL+LDE
Sbjct: 299 TLLVLDE 305




31|Sequence|151|160|LILDEESDIF

>sp|ENDA_METBU|TRNA-SPLICING endonuclease|Methanococcoides burtonii (strain DSM 6242

Query: 2 ILDEESDI 9
I+DEESDI
Sbjct: 149 IVDEESDI 156


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ILDEESDIF 10
I+ EESDIF
Sbjct: 71 IIIEESDIF 79


>sp|RL30E_METPE|LARGE ribosomal subunit protein eL30|Methanosphaerula palustris (strain

Query: 2 ILDEESDIF 10
+LDE++D++
Sbjct: 48 MLDEQNDVY 56


>sp|ARCH_THEVO|PROTEIN archease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ILDEESDI 9
ILD ESDI
Sbjct: 5 ILDHESDI 12


>sp|PELO_METJA|PROTEIN pelota homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DEESDIF 10
DEE+DIF
Sbjct: 141 DEEADIF 147


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LILDEESDI 9
LI DE+SD+
Sbjct: 379 LIYDEKSDV 387


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LILDEESDI 9
LI DE+SD+
Sbjct: 379 LIYDEKSDV 387


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LILDEESDI 9
LI DE+SD+
Sbjct: 379 LIYDEKSDV 387


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LILDEESDI 9
LI DE+SD+
Sbjct: 379 LIYDEKSDV 387


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 1 LILDEESDI 9
LI DE+SD+
Sbjct: 379 LIYDEKSDV 387


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LILDEESDI 9
LI DE+SD+
Sbjct: 379 LIYDEKSDV 387


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 LILDEESDI 9
LI DE+SD+
Sbjct: 379 LIYDEKSDV 387


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LILDEESDI 9
LI DE+SD+
Sbjct: 379 LIYDEKSDV 387


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LILDEESDI 9
LI DE+SD+
Sbjct: 379 LIYDEKSDV 387


>sp|ENDA_METMA|TRNA-SPLICING endonuclease|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ILDEESDI 9
++DEESD+
Sbjct: 152 VVDEESDL 159


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LILDEESDI 9
LI DE+SD+
Sbjct: 378 LIYDEKSDV 386


>sp|PMDHS_THESM|PHOSPHOMEVALONATE dehydratase small subunit|Thermococcus sibiricus (strain DSM

Query: 1 LILDEESDI 9
+I+D ESDI
Sbjct: 36 VIIDVESDI 44


>sp|RNH2_METST|RIBONUCLEASE HII|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LILDEESDIF 10
+ILD+ES I
Sbjct: 1 MILDDESQIL 10


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ILDEESDI 9
++DEESD+
Sbjct: 149 VVDEESDL 156


>sp|ENDA_METBF|TRNA-SPLICING endonuclease|Methanosarcina barkeri (strain Fusaro /

Query: 2 ILDEESDI 9
++DEESD+
Sbjct: 149 VVDEESDL 156




32|Sequence|156|165|ESDIFMLIFD

>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ESDIFMLIFD 10
++DIFM++ D
Sbjct: 227 KADIFMILTD 236


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SDIFMLIFD 10
+DIFM++ D
Sbjct: 228 ADIFMILTD 236


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 ESDIFMLIFD 10
+ D FML+ D
Sbjct: 897 DEDCFMLLLD 906


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 ESDIFMLIFD 10
+ D FML+ D
Sbjct: 992 DEDAFMLLLD 1001


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 ESDIFM 6
ESDIFM
Sbjct: 487 ESDIFM 492


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ESDIFMLIF 9
ES++F LIF
Sbjct: 83 ESELFKLIF 91


>sp|Y2122_ARCFU|UNCHARACTERIZED protein AF_2122|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SDIFMLIF 9
SDIF+LI+
Sbjct: 19 SDIFVLIY 26




33|Sequence|161|170|MLIFDAMHSF

>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 5 DAMHSF 10
DA+HSF
Sbjct: 267 DALHSF 272


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain

Query: 2 LIFDAMHSF 10
LIFD H F
Sbjct: 73 LIFDRKHYF 81




34|Sequence|166|175|AMHSFPANDE

>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 3 HSFPAND 9
HS+PA D
Sbjct: 28 HSWPARD 34




35|Sequence|171|180|PANDEVQKLG

>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PANDEVQKLG 10
PA +EVQKLG
Sbjct: 374 PAVEEVQKLG 383


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PANDEVQKLG 10
PA +EVQKLG
Sbjct: 374 PAVEEVQKLG 383


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 PANDEVQKLG 10
PA +EV+KLG
Sbjct: 374 PAVEEVEKLG 383


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PANDEVQKLG 10
PA+D ++KLG
Sbjct: 132 PAHDFIEKLG 141


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 1 PANDEVQK 8
P NDE++K
Sbjct: 129 PVNDEIKK 136


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PANDEVQKLG 10
PA +EV KLG
Sbjct: 374 PAVEEVNKLG 383


>sp|Y2171_ARCFU|UNCHARACTERIZED protein AF_2171|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PANDEVQKLG 10
PAN E+ K+G
Sbjct: 76 PANFEIVKIG 85


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 ANDEVQKL 9
+NDEVQK+
Sbjct: 628 SNDEVQKI 635


>sp|RISB_PYRFU|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PANDEVQKL 9
PA DE+Q +
Sbjct: 116 PAEDEIQAI 124


>sp|Y889_METJA|UNCHARACTERIZED protein MJ0889|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PANDEVQKLG 10
P NDE+ K+G
Sbjct: 238 PINDELVKVG 247


>sp|FLAX_SULAC|ARCHAEAL flagellar motor scaffold protein|Sulfolobus acidocaldarius

Query: 1 PANDEVQK 8
PANDE K
Sbjct: 61 PANDETSK 68


>sp|TRPD_METTM|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter marburgensis (strain

Query: 1 PANDEVQKLG 10
PA+ EVQ LG
Sbjct: 186 PASAEVQLLG 195


>sp|MTBC1_METMA|DIMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PANDEVQKLG 10
PA E +KLG
Sbjct: 84 PAGTETKKLG 93


>sp|MTBC2_METAC|DIMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PANDEVQKLG 10
PA E +KLG
Sbjct: 84 PAGTETKKLG 93


>sp|Y1659_METJA|UNCHARACTERIZED ATP-binding protein MJ1659|Methanocaldococcus jannaschii (strain

Query: 4 DEVQKLG 10
DE+QK+G
Sbjct: 157 DELQKIG 163


>sp|Y632_METJA|UNCHARACTERIZED ATP-binding protein MJ0632|Methanocaldococcus jannaschii (strain

Query: 4 DEVQKLG 10
DE+QK+G
Sbjct: 158 DELQKIG 164


>sp|Y1010_METJA|UNCHARACTERIZED ATP-binding protein MJ1010|Methanocaldococcus jannaschii (strain

Query: 4 DEVQKLG 10
DE+QK+G
Sbjct: 161 DELQKIG 167


>sp|MVK_THEKO|MEVALONATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ANDEVQKLG 10
+N+EV KLG
Sbjct: 141 SNEEVGKLG 149


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 4 DEVQKLG 10
DE+QK+G
Sbjct: 150 DELQKIG 156


>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 1 PANDEVQKL 9
P N +VQKL
Sbjct: 261 PENHDVQKL 269


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PANDEVQKLG 10
PA + V+KLG
Sbjct: 377 PAKEIVEKLG 386


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DEVQKLG 10
+E+QKLG
Sbjct: 49 EEIQKLG 55


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 4 DEVQKLG 10
DE+QK+G
Sbjct: 155 DELQKIG 161


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 PANDEVQKLG 10
PA + V+KLG
Sbjct: 377 PAKEIVEKLG 386


>sp|RL1_THEPD|LARGE ribosomal subunit protein uL1|Thermofilum pendens (strain DSM

Query: 3 NDEVQKLG 10
DE+QK+G
Sbjct: 91 KDELQKIG 98


>sp|ARFB_METVS|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus vannielii (strain ATCC

Query: 3 NDEVQKLG 10
N+EV K+G
Sbjct: 15 NEEVHKIG 22


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 PANDEVQKLG 10
PA + V+KLG
Sbjct: 377 PAKEIVEKLG 386


>sp|MVK_THEON|MEVALONATE kinase|Thermococcus onnurineus (strain NA1)

Query: 2 ANDEVQKLG 10
+N+E+ KLG
Sbjct: 138 SNEEIAKLG 146


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 4 DEVQKLG 10
DE+QK+G
Sbjct: 143 DELQKIG 149




36|Sequence|176|185|VQKLGCKALH

>sp|RPIA_ARCFU|RIBOSE-5-PHOSPHATE isomerase A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VQKLGCKA 8
++K+GCKA
Sbjct: 147 IEKMGCKA 154


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 1 VQKLGCKALH 10
VQK+G +A+H
Sbjct: 154 VQKVGGRAIH 163


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 3 KLGCKA 8
KLGCKA
Sbjct: 299 KLGCKA 304


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 3 KLGCKA 8
KLGCKA
Sbjct: 299 KLGCKA 304


>sp|RPIA_PICTO|RIBOSE-5-PHOSPHATE isomerase A|Picrophilus torridus (strain ATCC 700027

Query: 1 VQKLGCKA 8
+++LGC+A
Sbjct: 146 IERLGCRA 153


>sp|COFD_METBF|2-PHOSPHO-L-LACTATE transferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QKLGCKA 8
+KLGC+A
Sbjct: 273 EKLGCRA 279


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VQKLGCKAL 9
++K+GCK L
Sbjct: 64 MEKIGCKKL 72


>sp|PSA_METMJ|PROTEASOME subunit alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 KLGCKALH 10
+LG KALH
Sbjct: 192 RLGIKALH 199


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 VQKLGCK 7
++KLGCK
Sbjct: 363 LKKLGCK 369


>sp|COFC_METMJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VQKLGCKA 8
VQK GC A
Sbjct: 42 VQKSGCSA 49


>sp|RS2_AERPE|SMALL ribosomal subunit protein uS2|Aeropyrum pernix (strain ATCC

Query: 2 QKLGCKAL 9
+++GCKA+
Sbjct: 88 ERVGCKAI 95


>sp|KAD6_PYRFU|PUTATIVE adenylate kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QKLGCK 7
+KLGCK
Sbjct: 22 EKLGCK 27


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 1 VQKLGC 6
+QKLGC
Sbjct: 560 LQKLGC 565


>sp|GMHA_THEVO|PROBABLE phosphoheptose isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QKLGCKAL 9
++LGCK L
Sbjct: 142 KELGCKTL 149


>sp|PDAD_METJA|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VQKLGC 6
V+KLGC
Sbjct: 150 VEKLGC 155


>sp|NADE_HALSA|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VQKLGCKALH 10
V +LG ALH
Sbjct: 60 VDELGADALH 69


>sp|NADE_HALS3|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VQKLGCKALH 10
V +LG ALH
Sbjct: 60 VDELGADALH 69




37|Sequence|181|190|CKALHVLFER

>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ALHVLFE 9
ALHV+F+
Sbjct: 66 ALHVMFQ 72


>sp|LIVF_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus

Query: 2 KALHVLFE 9
K LH+LF+
Sbjct: 12 KELHILFD 19


>sp|Y155_ARCFU|UNCHARACTERIZED protein AF_0155|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CKALHVLFER 10
C ALH++ E+
Sbjct: 87 CHALHLMVEK 96




38|Sequence|186|195|VLFERVSEEQ

>sp|CDVB1_SULAC|CELL division protein B1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VLFERVSEEQ 10
VLFERV E Q
Sbjct: 64 VLFERVVESQ 73


>sp|SECY_HALVD|PROTEIN translocase subunit SecY|Haloferax volcanii (strain ATCC 29605

Query: 2 LFERVSEEQ 10
L+E ++EEQ
Sbjct: 466 LYEEIAEEQ 474


>sp|SECY_HALSA|PROTEIN translocase subunit SecY|Halobacterium salinarum (strain ATCC

Query: 2 LFERVSEEQ 10
L+E ++EEQ
Sbjct: 467 LYEEIAEEQ 475


>sp|SECY_HALMA|PROTEIN translocase subunit SecY|Haloarcula marismortui (strain ATCC 43049

Query: 2 LFERVSEEQ 10
L+E ++EEQ
Sbjct: 466 LYEEIAEEQ 474


>sp|GUAAB_METM7|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 2 LFERVSEEQ 10
+FE+V+EEQ
Sbjct: 112 VFEKVAEEQ 120


>sp|RL4_METM5|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain C5

Query: 1 VLFERVSEEQ 10
+LFER+++++
Sbjct: 98 ILFERINKKE 107


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VLFERVSEEQ 10
+LF++V++EQ
Sbjct: 543 ILFKKVTDEQ 552


>sp|RL4_METM7|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain C7

Query: 1 VLFERVSEEQ 10
+LFER++ ++
Sbjct: 98 ILFERINRKE 107


>sp|RL4_METM6|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain C6

Query: 1 VLFERVSEEQ 10
+LFER++ ++
Sbjct: 98 ILFERINRKE 107


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 2 LFERVSEE 9
+FERV+EE
Sbjct: 110 VFERVAEE 117


>sp|GUAAB_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit B|Archaeoglobus fulgidus

Query: 2 LFERVSEEQ 10
+FERV+EE
Sbjct: 108 IFERVAEEH 116


>sp|RL4_METMP|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain DSM

Query: 1 VLFERVSEEQ 10
+LFER++ ++
Sbjct: 98 ILFERINRKE 107




39|Sequence|191|200|VSEEQLTEFV

>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VSEEQLTEFV 10
V++E+LT+F+
Sbjct: 569 VAKEELTKFI 578


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SEEQLTEFV 10
+EE LTEF+
Sbjct: 523 NEEDLTEFI 531


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VSEEQLTEFV 10
V++E+LT+F+
Sbjct: 569 VAKEELTKFI 578


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SEEQLTEFV 10
++EQLT+F+
Sbjct: 570 AKEQLTKFI 578


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VSEEQLTEFV 10
V++E+LT+F+
Sbjct: 569 VAKEELTKFI 578


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VSEEQLTEFV 10
V++E+LT+F+
Sbjct: 569 VAKEELTKFI 578


>sp|MFNB_METKA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 VSEEQLTEFV 10
+SEE++ EFV
Sbjct: 166 LSEEEVGEFV 175




40|Sequence|196|205|LTEFVENKDY

>sp|RS13_THEVO|SMALL ribosomal subunit protein uS13|Thermoplasma volcanium (strain

Query: 1 LTEFVENKDY 10
L E+VENK+Y
Sbjct: 86 LKEYVENKEY 95


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 LTEFVENKDY 10
++ +ENKDY
Sbjct: 277 ISHLLENKDY 286


>sp|CBIH_METJA|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanocaldococcus

Query: 1 LTEFVENKDY 10
L EF ++KDY
Sbjct: 174 LAEFAKDKDY 183


>sp|TRUD_NANEQ|PROBABLE tRNA pseudouridine synthase D|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LTEFVENKDY 10
L F+E KDY
Sbjct: 223 LQSFIEKKDY 232


>sp|Y033_METJA|UNCHARACTERIZED FAD-dependent oxidoreductase MJ0033|Methanocaldococcus jannaschii

Query: 3 EFVENKDY 10
EFVEN D+
Sbjct: 390 EFVENHDF 397


>sp|Y1598_METJA|UPF0284 protein MJ1598|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTEFVENKDY 10
+ EF+ENK Y
Sbjct: 336 IREFIENKFY 345


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii (strain

Query: 1 LTEFVENKD 9
L EF+E KD
Sbjct: 384 LREFIEKKD 392


>sp|PGK_HALSA|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TEFVENKDY 10
T+F+ +DY
Sbjct: 245 TDFIHERDY 253


>sp|PGK_HALS3|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 TEFVENKDY 10
T+F+ +DY
Sbjct: 245 TDFIHERDY 253


>sp|CYDE_METJA|L-CYSTEINE desulfidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTEFVENK 8
L EF+ENK
Sbjct: 102 LEEFIENK 109


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 1 LTEFVENKD 9
L EFV+NK+
Sbjct: 28 LKEFVKNKN 36


>sp|RS15_NANEQ|SMALL ribosomal subunit protein uS15|Nanoarchaeum equitans (strain

Query: 3 EFVENK 8
EFVENK
Sbjct: 33 EFVENK 38


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 4 FVENKDY 10
F+++KDY
Sbjct: 93 FIQDKDY 99


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LTEFVEN 7
L EFVEN
Sbjct: 287 LVEFVEN 293


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LTEFVEN 7
L EFVEN
Sbjct: 287 LVEFVEN 293


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 1 LTEFVENKD 9
L EF+E+KD
Sbjct: 132 LEEFLEDKD 140


>sp|OGT_METMA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EFVENKDY 10
++VENKD+
Sbjct: 39 DWVENKDF 46


>sp|FLAB2_METVS|FLAGELLIN B2|Methanococcus vannielii (strain ATCC 35089

Query: 1 LTEFVENK 8
+TEF+ NK
Sbjct: 3 ITEFLNNK 10


>sp|END4_THEAC|PROBABLE endonuclease 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LTEFVENKDY 10
L +F+E+ DY
Sbjct: 196 LEKFIESLDY 205


>sp|Y942_SACS2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 VENKDY 10
+ENKDY
Sbjct: 243 IENKDY 248


>sp|Y1579_SACI1|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 VENKDY 10
+ENKDY
Sbjct: 243 IENKDY 248


>sp|Y1556_METJA|UNCHARACTERIZED protein MJ1556|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTEFVENKDY 10
+TE ++NK Y
Sbjct: 206 ITEIIKNKAY 215


>sp|Y1371_SACI2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 VENKDY 10
+ENKDY
Sbjct: 243 IENKDY 248


>sp|Y1334_SACI3|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 VENKDY 10
+ENKDY
Sbjct: 243 IENKDY 248


>sp|Y1284_SACI4|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 VENKDY 10
+ENKDY
Sbjct: 243 IENKDY 248


>sp|Y1269_SACI7|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 VENKDY 10
+ENKDY
Sbjct: 243 IENKDY 248


>sp|Y1268_SACI6|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 VENKDY 10
+ENKDY
Sbjct: 243 IENKDY 248


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 TEFVENKDY 10
TEF N DY
Sbjct: 393 TEFDNNTDY 401


>sp|Y1055_METJA|UNCHARACTERIZED protein MJ1055|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FVENKDY 10
F+ENKD+
Sbjct: 316 FLENKDW 322




41|Sequence|201|210|ENKDYMILLS

>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 ENKDYMILLS 10
ENKDY +L+
Sbjct: 282 ENKDYTKILA 291


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ENKDYMILLS 10
+NKDY++ L+
Sbjct: 387 QNKDYLVELA 396


>sp|BRIX_METMP|PROBABLE Brix domain-containing ribosomal biogenesis|Methanococcus

Query: 1 ENKDYMILL 9
ENKD MI++
Sbjct: 41 ENKDDMIIV 49


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 1 ENKDYMILL 9
E KDY+I L
Sbjct: 84 EGKDYLINL 92


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ENKDYMILL 9
E KDY+I L
Sbjct: 84 EGKDYLINL 92


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 1 ENKDYMILL 9
E KDY+I L
Sbjct: 84 EGKDYLINL 92


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ENKDYMILL 9
E KDY+I L
Sbjct: 84 EGKDYLINL 92




42|Sequence|206|215|MILLSALTNF

>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 MILLSALTNF 10
M+LL AL NF
Sbjct: 1446 MLLLDALLNF 1455


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MILLSALTNF 10
M+LL AL NF
Sbjct: 1126 MLLLDALLNF 1135


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MILLSALTNF 10
M+LL AL NF
Sbjct: 961 MLLLDALLNF 970


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 MILLSALTNF 10
M+LL AL NF
Sbjct: 1148 MLLLDALLNF 1157


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 MILLSALTNF 10
M+LL AL NF
Sbjct: 852 MLLLDALLNF 861


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 MILLSALTNF 10
M+LL AL NF
Sbjct: 876 MLLLDALLNF 885


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 MILLSALTNF 10
M+L+ AL NF
Sbjct: 868 MLLMDALLNF 877


>sp|PYRH_META3|URIDYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 MILLSALTNF 10
M+L+SAL N+
Sbjct: 79 MLLISALDNY 88


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 MILLSALTNF 10
M+LL L NF
Sbjct: 1044 MLLLDGLINF 1053


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 MILLSALTNF 10
M+LL L NF
Sbjct: 1046 MLLLDGLINF 1055


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 MILLSALTNF 10
M+LL L NF
Sbjct: 836 MLLLDGLLNF 845


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 MILLSALTNF 10
M+LL L NF
Sbjct: 957 MLLLDGLLNF 966


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 MILLSALTNF 10
M+LL L NF
Sbjct: 902 MLLLDGLLNF 911


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 MILLSALTNF 10
M+LL L NF
Sbjct: 997 MLLLDVLLNF 1006




43|Sequence|211|220|ALTNFKDEEE

>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LTNFKDEE 9
L NFKDEE
Sbjct: 97 LGNFKDEE 104


>sp|TSR3_METJA|16S rRNA aminocarboxypropyltransferase|Methanocaldococcus jannaschii

Query: 2 LTNFKDE 8
+TNFKDE
Sbjct: 122 ITNFKDE 128


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 5 FKDEEE 10
FKDEEE
Sbjct: 94 FKDEEE 99


>sp|Y1681_METJA|UNCHARACTERIZED protein MJ1681|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALTNFKDEE 9
A+TN DEE
Sbjct: 138 AITNLSDEE 146


>sp|Y045_METJA|UNCHARACTERIZED protein MJ0045|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TNFKDEE 9
TNFKD+E
Sbjct: 133 TNFKDDE 139


>sp|Y1060_METJA|UNCHARACTERIZED protein MJ1060|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LTNFKDEEE 10
LTN+ DE E
Sbjct: 266 LTNYNDEHE 274


>sp|TRPB1_PYRFU|TRYPTOPHAN synthase beta chain 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ALTNFKDEEE 10
A FKD+EE
Sbjct: 25 AYKRFKDDEE 34


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LTNFKDEE 9
L NF+DEE
Sbjct: 421 LENFQDEE 428


>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TNFKDEEE 10
T FKDE E
Sbjct: 185 TTFKDETE 192


>sp|ARGJ_METJA|GLUTAMATE N-acetyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LTNFKDE 8
L+N+KDE
Sbjct: 333 LSNYKDE 339


>sp|CBIH_METJA|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanocaldococcus

Query: 1 ALTNFKD 7
+TNFKD
Sbjct: 199 VITNFKD 205


>sp|THSA_HALSA|THERMOSOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 2 LTNFKDEEE 10
L NF D+EE
Sbjct: 262 LQNFLDQEE 270




44|Sequence|216|225|KDEEEIVLHV

>sp|UVRC_METMA|UVRABC system protein C|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KDEEEIVLHV 10
KDEE IVL+V
Sbjct: 23 KDEEGIVLYV 32


>sp|UVRC_METAC|UVRABC system protein C|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KDEEEIVLHV 10
KDEE +VL+V
Sbjct: 17 KDEEGVVLYV 26


>sp|RS24_HALMA|SMALL ribosomal subunit protein eS24|Haloarcula marismortui (strain

Query: 1 KDEEEIVLH 9
KD EE+V+H
Sbjct: 45 KDAEEVVIH 53


>sp|RS24_HALSA|SMALL ribosomal subunit protein eS24|Halobacterium salinarum (strain

Query: 1 KDEEEIVLH 9
KD EE+V+H
Sbjct: 45 KDSEEVVVH 53


>sp|RS24_HALS3|SMALL ribosomal subunit protein eS24|Halobacterium salinarum (strain

Query: 1 KDEEEIVLH 9
KD EE+V+H
Sbjct: 45 KDSEEVVVH 53


>sp|MFNA_METPE|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaerula palustris

Query: 2 DEEEIVLHV 10
+EE++ LHV
Sbjct: 182 EEEDLYLHV 190


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 DEEEIVLH 9
DEE+ VLH
Sbjct: 515 DEEKAVLH 522


>sp|RS24_HALWD|SMALL ribosomal subunit protein eS24|Haloquadratum walsbyi (strain DSM

Query: 1 KDEEEIVLH 9
KD +E+V+H
Sbjct: 45 KDSDEVVVH 53


>sp|DCD_THESM|DCTP deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 2 DEEEIVLH 9
EEE++LH
Sbjct: 110 SEEEVILH 117




45|Sequence|221|230|IVLHVLHCLH

>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 2 VLHVLHCLH 10
+LH CLH
Sbjct: 239 MLHCFRCLH 247


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IVLHVLHCLH 10
+ LH CLH
Sbjct: 339 VELHAFDCLH 348


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IVLHVLHCLH 10
+ LH CLH
Sbjct: 339 VELHAFDCLH 348


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IVLHVLHCLH 10
+ LH CLH
Sbjct: 339 VRLHAFDCLH 348


>sp|DNLI_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 LHVLHCLH 10
LH CLH
Sbjct: 382 LHAFDCLH 389


>sp|PYRI_METMA|ASPARTATE carbamoyltransferase regulatory chain|Methanosarcina mazei (strain

Query: 1 IVLHVLHCLH 10
+ LH L+C H
Sbjct: 136 VSLHCLYCEH 145


>sp|PYRI_METAC|ASPARTATE carbamoyltransferase regulatory chain|Methanosarcina acetivorans

Query: 1 IVLHVLHCLH 10
+ LH L+C H
Sbjct: 136 VSLHCLYCEH 145


>sp|Y075_METJA|UNCHARACTERIZED ATP-binding protein MJ0075|Methanocaldococcus jannaschii (strain

Query: 3 LHVLHCL 9
LH+ HC
Sbjct: 184 LHITHCF 190


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus (strain

Query: 2 VLHVLHCLH 10
VL +LH LH
Sbjct: 308 VLKLLHMLH 316


>sp|IF2B_PYRCJ|TRANSLATION initiation factor 2 subunit|Pyrobaculum calidifontis (strain DSM

Query: 3 LHVLHCL 9
+ VLHCL
Sbjct: 117 IFVLHCL 123


>sp|RBL_METBF|RIBULOSE bisphosphate carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IVLHVLHCLH 10
+ LH C+H
Sbjct: 265 LALHAHRCMH 274


>sp|RBL_METAC|RIBULOSE bisphosphate carboxylase|Methanosarcina acetivorans (strain ATCC

Query: 1 IVLHVLHCLH 10
+ LH C+H
Sbjct: 265 LALHAHRCMH 274


>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IVLHVLHCLH 10
+ LH C+H
Sbjct: 265 LALHAHRCMH 274




46|Sequence|226|235|LHCLHSLAIP

>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC

Query: 1 LHCLHSLAIP 10
H LH AIP
Sbjct: 64 FHALHGRAIP 73


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 3 CLHSLAIP 10
C H LAIP
Sbjct: 227 CGHPLAIP 234


>sp|PYRDB_SULAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Sulfolobus acidocaldarius

Query: 3 CLHSLAI 9
C+H+LA+
Sbjct: 206 CIHALAV 212


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 LHCLHSLAI 9
LH HS+AI
Sbjct: 356 LHISHSVAI 364




47|Sequence|231|240|SLAIPCNNVE

>sp|Y200_METJA|UNCHARACTERIZED hydrogenase expression/formation protein

Query: 2 LAIPCNNVE 10
LAIPC VE
Sbjct: 3 LAIPCKVVE 11


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 SLAIPCNN 8
++A+PC N
Sbjct: 12 TIAVPCQN 19


>sp|Y1526_METAR|PUTATIVE HTH-type transcriptional regulatory protein|Methanocella arvoryzae

Query: 3 AIPCNNVE 10
IPC N+E
Sbjct: 95 GIPCVNIE 102


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 1 SLAIPCNNVE 10
S+ PC NVE
Sbjct: 396 SMVKPCLNVE 405


>sp|RS2_KORCO|SMALL ribosomal subunit protein uS2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LAIPCNN 8
LAIP NN
Sbjct: 166 LAIPVNN 172


>sp|Y231_METJA|UNCHARACTERIZED protein MJ0231|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AIPCNNVE 10
AIP N+VE
Sbjct: 391 AIPLNDVE 398


>sp|RS2_PYRHO|SMALL ribosomal subunit protein uS2|Pyrococcus horikoshii (strain ATCC

Query: 2 LAIPCNN 8
LAIP NN
Sbjct: 152 LAIPTNN 158


>sp|RS2_PYRFU|SMALL ribosomal subunit protein uS2|Pyrococcus furiosus (strain ATCC

Query: 2 LAIPCNN 8
LAIP NN
Sbjct: 152 LAIPTNN 158


>sp|RS2_PYRAB|SMALL ribosomal subunit protein uS2|Pyrococcus abyssi (strain GE5 /

Query: 2 LAIPCNN 8
LAIP NN
Sbjct: 152 LAIPTNN 158


>sp|RS2_METKA|SMALL ribosomal subunit protein uS2|Methanopyrus kandleri (strain AV19 /

Query: 2 LAIPCNN 8
LAIP NN
Sbjct: 154 LAIPTNN 160


>sp|BIOW_METVM|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 2 LAIPCNNVE 10
+ IPC N++
Sbjct: 69 ITIPCKNIK 77


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 4 IPCNNVE 10
IP NNVE
Sbjct: 147 IPFNNVE 153


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 IPCNNVE 10
+P NNVE
Sbjct: 269 VPLNNVE 275


>sp|Y527_METM7|UPF0200 protein MmarC7_0527|Methanococcus maripaludis (strain C7 /

Query: 1 SLAIPCNN 8
++AIPC N
Sbjct: 66 AIAIPCLN 73




48|Sequence|236|245|CNNVEVLMSG

>sp|HEM1_METMJ|GLUTAMYL-TRNA reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 CNNVEVLMSG 10
CN +EVL+ G
Sbjct: 52 CNRIEVLVQG 61


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 CNNVEVLMSG 10
CN VE+L+ G
Sbjct: 52 CNRVEILVHG 61


>sp|HEM1_METB6|GLUTAMYL-TRNA reductase|Methanoregula boonei (strain DSM 21154

Query: 1 CNNVEVLMSG 10
CN VEV++ G
Sbjct: 51 CNRVEVIVEG 60


>sp|HEM1_METKA|GLUTAMYL-TRNA reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 CNNVEVLMSG 10
CN VEV SG
Sbjct: 48 CNRVEVYASG 57


>sp|HEM1_METHJ|GLUTAMYL-TRNA reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CNNVEVLMSG 10
CN +E+++ G
Sbjct: 52 CNRIEIMVHG 61


>sp|HEM1_CALMQ|GLUTAMYL-TRNA reductase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 CNNVEVLMSG 10
CN VEV + G
Sbjct: 52 CNRVEVYVYG 61


>sp|SRP54_METMA|SIGNAL recognition particle 54 kDa|Methanosarcina mazei (strain ATCC

Query: 3 NVEVLMSG 10
NVE LM G
Sbjct: 311 NVEALMQG 318


>sp|SRP54_METBF|SIGNAL recognition particle 54 kDa|Methanosarcina barkeri (strain Fusaro /

Query: 3 NVEVLMSG 10
NVE LM G
Sbjct: 311 NVEALMQG 318


>sp|SRP54_METAC|SIGNAL recognition particle 54 kDa|Methanosarcina acetivorans (strain ATCC

Query: 3 NVEVLMSG 10
NVE LM G
Sbjct: 311 NVEALMQG 318


>sp|CEDA2_SULAC|DNA import protein CedA2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 NVEVLMSG 10
NV++L+SG
Sbjct: 24 NVQILVSG 31


>sp|GATD_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus vannielii (strain ATCC

Query: 2 NNVEVLMS 9
NNV VLMS
Sbjct: 348 NNVLVLMS 355




49|Sequence|241|250|VLMSGNVRCY

>sp|PGP_METMA|PHOSPHOGLYCOLATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLMSGNVRCY 10
VL +GN+ CY
Sbjct: 37 VLATGNILCY 46


>sp|PGP_METAC|PHOSPHOGLYCOLATE phosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VLMSGNVRCY 10
VL +GN+ CY
Sbjct: 37 VLATGNILCY 46


>sp|ARGC_METTP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VLMSGNVRC 9
V M GNVRC
Sbjct: 276 VPMLGNVRC 284


>sp|PGP_ARCFU|PHOSPHOGLYCOLATE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLMSGNVRCY 10
+L +GN+ C+
Sbjct: 38 ILATGNISCF 47


>sp|PGP_METTP|PHOSPHOGLYCOLATE phosphatase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VLMSGNVRCY 10
+L++GN C+
Sbjct: 36 ILVTGNTHCF 45


>sp|RS7_METHJ|SMALL ribosomal subunit protein uS7|Methanospirillum hungatei JF-1

Query: 4 SGNVRCY 10
+G+V+CY
Sbjct: 172 NGDVKCY 178


>sp|PGP_METBU|PHOSPHOGLYCOLATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VLMSGNVRCY 10
+L +GN CY
Sbjct: 37 ILSTGNPLCY 46




50|Sequence|246|255|NVRCYNIVVE

>sp|ARGC_METTP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NVRCYNI 7
N+RCY +
Sbjct: 193 NIRCYRV 199


>sp|Y012_METJA|TNPB-LIKE protein MJ0012|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VRCYNI 7
VRCYNI
Sbjct: 111 VRCYNI 116


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NVRCYNIV 8
N++ YNIV
Sbjct: 281 NIKSYNIV 288


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NVRCYNIVVE 10
N + YNIV++
Sbjct: 321 NFKVYNIVIK 330




51|Sequence|251|260|NIVVEAMKAF

>sp|XERA_PYRFU|TYROSINE recombinase XerA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NIVVEAMKAF 10
N+VV+A+KA+
Sbjct: 68 NLVVQALKAY 77


>sp|XERA_PYRAB|TYROSINE recombinase XerA|Pyrococcus abyssi (strain GE5 /

Query: 1 NIVVEAMKAF 10
N+V++A+KA+
Sbjct: 70 NLVIQALKAY 79


>sp|KAE1_STAMF|TRNA N6-adenosine threonylcarbamoyltransferase|Staphylothermus marinus

Query: 1 NIVVEAMKAF 10
N++VE KAF
Sbjct: 312 NVIVEPRKAF 321


>sp|XERA_PYRHO|TYROSINE recombinase XerA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NIVVEAMKAF 10
N+V++A+K++
Sbjct: 70 NLVIQALKSY 79


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 NIVVEAMKA 9
N++ EAMKA
Sbjct: 853 NLINEAMKA 861


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 NIVVEAMKA 9
N++ EAMKA
Sbjct: 853 NLINEAMKA 861


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 NIVVEAMKA 9
N++ EAMKA
Sbjct: 853 NLINEAMKA 861


>sp|IF2A_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 NIVVEAMKA 9
++++EA+KA
Sbjct: 194 DVIIEALKA 202


>sp|ARGDC_STAMF|ARGININE decarboxylase proenzyme|Staphylothermus marinus (strain ATCC

Query: 1 NIVVEAMK 8
N+VVEA K
Sbjct: 35 NVVVEAAK 42




52|Sequence|256|265|AMKAFPMSER

>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 3 KAFPMSER 10
KAFPM +R
Sbjct: 200 KAFPMDDR 207


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AMKAFPMSER 10
AM+ FP+ ER
Sbjct: 261 AMRLFPLEER 270


>sp|LEUC_PYRAE|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KAFPMSER 10
KAFPM +R
Sbjct: 200 KAFPMDDR 207


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 3 KAFPMSER 10
KAFPM +R
Sbjct: 200 KAFPMDDR 207


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 1 AMKAFPMSER 10
AM+A PM +R
Sbjct: 48 AMRALPMGDR 57


>sp|LEUC_PYRNV|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 KAFPMSER 10
KAFPM +R
Sbjct: 200 KAFPMDDR 207


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 1 AMKAFPMSE 9
AMK P+SE
Sbjct: 393 AMKGIPVSE 401


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 3 KAFPMSER 10
KAFPM R
Sbjct: 201 KAFPMDYR 208


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 KAFPMSER 10
K FPM +R
Sbjct: 200 KVFPMDDR 207


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 3 KAFPMSER 10
KAFPM R
Sbjct: 201 KAFPMDYR 208




53|Sequence|261|270|PMSERIQEVS

>sp|LIVM_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 1 PMSERIQEVS 10
PM ++I E+S
Sbjct: 334 PMKKKIMEIS 343


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PMSERIQEVS 10
PMS+ IQEV+
Sbjct: 235 PMSKIIQEVN 244


>sp|SYFA_METMP|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 PMSERIQEVS 10
PMS+ IQEV+
Sbjct: 235 PMSKIIQEVN 244


>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PMSERIQEVS 10
PMS+ IQEV+
Sbjct: 235 PMSKIIQEVN 244


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 3 SERIQEVS 10
+ER+QE+S
Sbjct: 463 AERLQEIS 470




54|Sequence|266|275|IQEVSCCLLH

>sp|CAS1A_METRM|CRISPR-ASSOCIATED protein Cas1 1|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 QEVSCCLLH 10
Q+++CCLL+
Sbjct: 256 QDLNCCLLN 264


>sp|DTDA_META3|D-AMINOACYL-TRNA deacylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IQEVSCC 7
I+EV CC
Sbjct: 90 IEEVCCC 96


>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IQEVSCCLLH 10
+ E CC LH
Sbjct: 308 LTEGGCCYLH 317


>sp|Y606_METJA|UNCHARACTERIZED protein MJ0606|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EVSCCLLH 10
E CCL+H
Sbjct: 4 EGKCCLIH 11




55|Sequence|271|280|CCLLHRLTLG

>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 2 CLLHRLTLG 10
C +H L+LG
Sbjct: 46 CNIHALSLG 54




56|Sequence|276|285|RLTLGNFFNI

>sp|Y1526_METJA|UPF0280 protein MJ1526|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLTLGNFFNI 10
R+TLG F+I
Sbjct: 234 RITLGELFDI 243


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 2 LTLGNFFNI 10
L LGNFF I
Sbjct: 122 LLLGNFFKI 130


>sp|SYC_HALSA|CYSTEINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 TLGNFFNI 10
+LGNFF +
Sbjct: 291 SLGNFFTV 298


>sp|TRUD_PYRFU|PROBABLE tRNA pseudouridine synthase D|Pyrococcus furiosus (strain ATCC

Query: 4 LGNFFNI 10
LGNFF I
Sbjct: 123 LGNFFKI 129


>sp|AROA_METAR|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RLTLGNFF 8
R+T+GN F
Sbjct: 251 RVTVGNLF 258


>sp|TRUD_ARCFU|PROBABLE tRNA pseudouridine synthase D|Archaeoglobus fulgidus (strain ATCC

Query: 4 LGNFFNI 10
LGNFF I
Sbjct: 126 LGNFFRI 132


>sp|THIE_PICTO|THIAMINE-PHOSPHATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 5 GNFFNI 10
GNFFNI
Sbjct: 16 GNFFNI 21


>sp|BIOF_METVS|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus vannielii (strain

Query: 1 RLTLGNF 7
RLT GNF
Sbjct: 64 RLTSGNF 70




57|Sequence|281|290|NFFNILVLNE

>sp|HEM1_THEAC|GLUTAMYL-TRNA reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NFFNILVLN 9
NFFN VLN
Sbjct: 16 NFFNQAVLN 24


>sp|FLAB3_METVS|FLAGELLIN B3|Methanococcus vannielii (strain ATCC 35089

Query: 1 NFFNILVLNE 10
N+F +LVL +
Sbjct: 135 NYFGVLVLQD 144


>sp|THIE_THEAC|THIAMINE-PHOSPHATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NFFNIL 6
NFFNI+
Sbjct: 22 NFFNII 27


>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 3 FNILVLNE 10
FNIL +NE
Sbjct: 168 FNILSINE 175




58|Sequence|286|295|LVLNEVHEFV

>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 1 LVLNEVHEFV 10
L +NEV EFV
Sbjct: 302 LEVNEVREFV 311


>sp|RADB_THEGJ|DNA repair and recombination protein|Thermococcus gammatolerans (strain

Query: 1 LVLNEVH 7
LV+N+VH
Sbjct: 150 LVINQVH 156




59|Sequence|291|300|VHEFVVKAVQ

>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VHEFVVKA 8
+H+F++KA
Sbjct: 166 IHKFIIKA 173




60|Sequence|296|305|VKAVQQYPEN

>sp|PURA_METBF|ADENYLOSUCCINATE synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VKAVQQYPEN 10
VKA ++ PEN
Sbjct: 383 VKAFEELPEN 392


>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VKAVQQYP 8
V+A+Q YP
Sbjct: 24 VRAIQPYP 31


>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KAVQQYPEN 10
KA++++P N
Sbjct: 180 KAIKEFPAN 188


>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VKAVQQYPEN 10
VKA + PEN
Sbjct: 383 VKAYSELPEN 392


>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 KAVQQYP 8
KAV QYP
Sbjct: 330 KAVTQYP 336


>sp|RL18_PYRAR|LARGE ribosomal subunit protein uL18|Pyrobaculum arsenaticum (strain DSM

Query: 2 KAVQQYPEN 10
KA+QQ+ EN
Sbjct: 189 KAIQQHYEN 197


>sp|KDAD_SACS2|2-DEHYDRO-3-DEOXY-D-ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VKAVQQYPEN 10
+KA+ +Y EN
Sbjct: 36 IKALMRYSEN 45




61|Sequence|301|310|QYPENAALQI

>sp|FPOL_METMA|F(420)H(2) dehydrogenase subunit L|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PENAALQI 10
PE AALQI
Sbjct: 216 PELAALQI 223


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PENAAL 8
PENAAL
Sbjct: 97 PENAAL 102


>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 2 YPENAALQI 10
+PE ALQ+
Sbjct: 551 HPEKTALQV 559


>sp|CAPPA_HALSA|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QYPENAAL 8
Q+P+NA L
Sbjct: 11 QHPDNATL 18


>sp|CAPPA_HALS3|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 1 QYPENAAL 8
Q+P+NA L
Sbjct: 11 QHPDNATL 18




62|Sequence|306|315|AALQISALSC

***** No hits found ******


63|Sequence|311|320|SALSCLALLT

***** No hits found ******


64|Sequence|316|325|LALLTETIFL

>sp|PSB1_IGNH4|PROTEASOME subunit beta 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LLTETIF 9
L+TET+F
Sbjct: 100 LMTETVF 106




65|Sequence|321|330|ETIFLNQDLE

>sp|Y834_METJA|UNCHARACTERIZED protein MJ0834|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ETIFLNQDL 9
+ IFLN DL
Sbjct: 50 QNIFLNHDL 58


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 FLNQDLE 10
FL+QDLE
Sbjct: 483 FLSQDLE 489


>sp|Y179_ARCFU|UNCHARACTERIZED protein AF_0179|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ETIFLNQDL 9
+TIFLN+ L
Sbjct: 220 DTIFLNRGL 228


>sp|SYN_THEVO|ASPARAGINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ETIFLNQDLE 10
E IFLNQ +
Sbjct: 176 EPIFLNQSAQ 185


>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 1 ETIFLNQDLE 10
ET+F++ D E
Sbjct: 387 ETVFISTDFE 396




66|Sequence|326|335|NQDLEEKNEN

>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 QDLEEKNEN 10
QDLEEK ++
Sbjct: 437 QDLEEKTKD 445


>sp|ARGJ_METM5|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 NQDLEEKNEN 10
N DLE NEN
Sbjct: 134 NMDLENSNEN 143


>sp|METE_AERPE|METHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 DLEEKNEN 10
DLE KN N
Sbjct: 239 DLEMKNSN 246




67|Sequence|331|340|EKNENQENDD

>sp|RL18_SULAC|LARGE ribosomal subunit protein uL18|Sulfolobus acidocaldarius (strain

Query: 2 KNENQE 7
KNENQE
Sbjct: 156 KNENQE 161


>sp|Y064_ARCFU|UNCHARACTERIZED protein AF_0064|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKNENQENDD 10
E N+N NDD
Sbjct: 16 ESNKNLRNDD 25




68|Sequence|336|345|QENDDEGEED

***** No hits found ******


69|Sequence|341|350|EGEEDKLFWL

>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 1 EGEEDKLFWL 10
E EED LFWL
Sbjct: 175 ENEEDYLFWL 184


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 3 EEDKLFWL 10
EED LFWL
Sbjct: 175 EEDYLFWL 182


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM

Query: 1 EGEEDKL 7
EGEEDKL
Sbjct: 13 EGEEDKL 19


>sp|AGLP_HALVD|HEXURONIC acid methyltransferase AglP|Haloferax volcanii (strain ATCC 29605

Query: 1 EGEEDKLFW 9
E EED + W
Sbjct: 63 EAEEDDVLW 71


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EGEEDKLF 8
EGEE K+F
Sbjct: 191 EGEEPKVF 198


>sp|Y1537_METJA|UNCHARACTERIZED protein MJ1537|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGEEDKLFWL 10
EG E+++F+L
Sbjct: 277 EGNENEIFYL 286


>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EGEEDKLFWL 10
EG ED+L+ L
Sbjct: 168 EGREDRLYSL 177


>sp|Y150_METJA|UNCHARACTERIZED protein MJ0150|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EDKLFW 9
EDKL+W
Sbjct: 168 EDKLYW 173


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EGEEDKLFWL 10
+G ED+++W+
Sbjct: 85 KGFEDEVYWV 94


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EGEEDKLFWL 10
+G ED+++W+
Sbjct: 85 KGFEDEVYWV 94


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EGEEDKLFWL 10
+G ED+++W+
Sbjct: 88 KGFEDEVYWV 97


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 EGEEDKLFWL 10
+G ED++FW+
Sbjct: 75 KGFEDEVFWV 84


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 EGEEDKLFWL 10
+G ED+++W+
Sbjct: 85 KGFEDEVYWV 94


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EGEEDKLFWL 10
+G ED++FW+
Sbjct: 75 KGFEDEVFWV 84


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 EGEEDKLFWL 10
+G ED++FW+
Sbjct: 75 KGFEDEVFWV 84


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 EGEEDKLFWL 10
+G ED++FW+
Sbjct: 75 KGFEDEVFWV 84


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 EEDKLFWL 10
E+DK+ WL
Sbjct: 129 EKDKVRWL 136


>sp|Y008_METKA|UNCHARACTERIZED protein MK0008|Methanopyrus kandleri (strain AV19 /

Query: 1 EGEEDKLFWL 10
EGEE K+F +
Sbjct: 37 EGEEVKIFLI 46


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EGEEDKLFWL 10
+G ED+++W+
Sbjct: 85 KGFEDEVYWV 94




70|Sequence|346|355|KLFWLEACYK

>sp|SYH_METMA|HISTIDINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KLFWLEACYK 10
KLF+ E C++
Sbjct: 99 KLFYFENCFR 108


>sp|SYH_METAC|HISTIDINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KLFWLEACYK 10
KLF+ E C++
Sbjct: 99 KLFYFENCFR 108


>sp|KADL_METTH|ADENYLATE kinase homolog MTH_1663|Methanothermobacter thermautotrophicus

Query: 2 LFWLEACYK 10
L WLEA ++
Sbjct: 66 LIWLEAAHR 74


>sp|Y2165_ARCFU|UNCHARACTERIZED protein AF_2165|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLFWLEACY 9
+LF ++ACY
Sbjct: 149 RLFVIQACY 157


>sp|TVOK_THEVO|CALCIUM-GATED potassium channel TvoK|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KLFWLEAC 8
K+F +EAC
Sbjct: 279 KIFSIEAC 286


>sp|HEXPP_SACS2|HEXAPRENYL pyrophosphate synthase|Saccharolobus solfataricus (strain ATCC

Query: 3 FWLEA 7
FWLEA
Sbjct: 6 FWLEA 10


>sp|SYFA_SACS2|PHENYLALANINE--TRNA ligase alpha subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLFWLEAC 8
KL W+E C
Sbjct: 403 KLGWVEMC 410


>sp|Y2167_ARCFU|UNCHARACTERIZED protein AF_2167|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLFWLEACY 9
+LF + ACY
Sbjct: 218 RLFVVSACY 226




71|Sequence|351|360|EACYKALTWH

>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 4 YKALTWH 10
YK TWH
Sbjct: 219 YKLFTWH 225


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 4 YKALTWH 10
YK TWH
Sbjct: 219 YKLFTWH 225


>sp|Y1477_METJA|UNCHARACTERIZED protein MJ1477|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EACYKALTWH 10
E CY WH
Sbjct: 156 EGCYAVKYWH 165


>sp|RFCS_METB6|REPLICATION factor C small subunit|Methanoregula boonei (strain DSM 21154

Query: 3 CYKALT 8
CY+ALT
Sbjct: 269 CYRALT 274


>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter thermautotrophicus

Query: 3 CYKALTW 9
CY A++W
Sbjct: 293 CYLAVSW 299


>sp|GATD_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 1 EACYKALTW 9
EA Y L+W
Sbjct: 381 EAAYAKLSW 389


>sp|Y1369_METJA|UNCHARACTERIZED protein MJ1369|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EACYKALTW 9
E CY + W
Sbjct: 20 EICYNHMIW 28




72|Sequence|356|365|ALTWHRKNKH

>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 LTWHRKN 8
L WHRKN
Sbjct: 195 LEWHRKN 201


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ALTWHRKN 8
ALTW R+N
Sbjct: 506 ALTWMREN 513


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 4 WHRKN 8
WH+KN
Sbjct: 10 WHKKN 14


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 5 HRKNKH 10
HRK KH
Sbjct: 334 HRKRKH 339


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 5 HRKNKH 10
HRK KH
Sbjct: 333 HRKRKH 338


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 HRKNKH 10
HRK KH
Sbjct: 320 HRKRKH 325


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 HRKNKH 10
HRK KH
Sbjct: 320 HRKRKH 325


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 HRKNKH 10
HRK KH
Sbjct: 320 HRKRKH 325


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 HRKNKH 10
HRK KH
Sbjct: 320 HRKRKH 325


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 HRKNKH 10
HRK KH
Sbjct: 320 HRKRKH 325


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 HRKNKH 10
HRK KH
Sbjct: 334 HRKRKH 339


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 3 TWHRKN 8
T+HRKN
Sbjct: 84 TFHRKN 89




73|Sequence|361|370|RKNKHVQEAA

>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 1 RKNKHVQEAA 10
+KN+ VQ+AA
Sbjct: 392 KKNQTVQDAA 401


>sp|COFC_METST|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 KHVQEA 9
KHVQEA
Sbjct: 159 KHVQEA 164


>sp|KCY_METTP|CYTIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RKNKHVQEA 9
R+NK ++EA
Sbjct: 109 RENKSIEEA 117




74|Sequence|366|375|VQEAACWALN

>sp|Y1533_ARCFU|UNCHARACTERIZED transporter AF_1533|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 AACWALN 10
A CWA N
Sbjct: 11 AICWAFN 17


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 VQEAACWA 8
V AACWA
Sbjct: 429 VLPAACWA 436


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 VQEAACWA 8
V AACWA
Sbjct: 432 VLPAACWA 439


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 VQEAACWA 8
V AACWA
Sbjct: 434 VLPAACWA 441


>sp|Y2270_ARCFU|UNCHARACTERIZED protein AF_2270|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QEAACWAL 9
+ +ACWA+
Sbjct: 119 RNSACWAV 126


>sp|Y078_METKA|UPF0285 protein MK0078|Methanopyrus kandleri (strain AV19 /

Query: 1 VQEAACWALN 10
V+EA C LN
Sbjct: 54 VEEAECICLN 63


>sp|LEU1_METMA|PROBABLE 2-isopropylmalate synthase|Methanosarcina mazei (strain ATCC

Query: 1 VQEAACWALN 10
VQEA C +N
Sbjct: 169 VQEAGCDIIN 178


>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain ATCC

Query: 1 VQEAACWALN 10
VQEA C +N
Sbjct: 169 VQEAGCDIIN 178




75|Sequence|371|380|CWALNNLLMY

>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 WALNNLLM 9
WAL +LLM
Sbjct: 442 WALPSLLM 449


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 2 WALNNLL 8
WAL+NL+
Sbjct: 221 WALDNLV 227


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CWALNN 6
C+ALNN
Sbjct: 273 CYALNN 278


>sp|Y806_METJA|UNCHARACTERIZED peptidase MJ0806|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WALNNL 7
W LNNL
Sbjct: 144 WVLNNL 149


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 2 WALNNLL 8
WAL NL+
Sbjct: 152 WALTNLI 158


>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 3 ALNNLLMY 10
A+NN+ MY
Sbjct: 342 AINNITMY 349


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 WALNNL 7
WA NNL
Sbjct: 111 WAYNNL 116


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 WALNNL 7
WA NNL
Sbjct: 111 WAYNNL 116


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WALNNLLMY 10
W LN L+Y
Sbjct: 560 WELNYFLVY 568


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WALNNLLMY 10
WA N+L Y
Sbjct: 152 WAPKNVLFY 160


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 WALNNL 7
WA NNL
Sbjct: 111 WAYNNL 116


>sp|Y830_METJA|UNCHARACTERIZED protein MJ0830|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WALNNLLM 9
W+LNN ++
Sbjct: 59 WSLNNAII 66




76|Sequence|376|385|NLLMYQNSLH

>sp|TRPA_METKA|TRYPTOPHAN synthase alpha chain|Methanopyrus kandleri (strain AV19 /

Query: 2 LLMYQNSLH 10
LL Y N+LH
Sbjct: 98 LLCYYNTLH 106


>sp|OTC_METJA|ORNITHINE carbamoyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LLMYQNSLH 10
L+M QN +H
Sbjct: 67 LIMNQNEIH 75




77|Sequence|381|390|QNSLHEKIGD

>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 1 QNSLHEKIGD 10
QNSL EKIG+
Sbjct: 313 QNSLEEKIGN 322


>sp|ILVC_SACI2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 QNSLHEKIGD 10
QNSL EKIG+
Sbjct: 313 QNSLEEKIGN 322


>sp|ILVC_SACI7|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 QNSLHEKIGD 10
QNSL EKIG+
Sbjct: 313 QNSLEEKIGN 322


>sp|ILVC_SACI6|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.16.4

Query: 1 QNSLHEKIGD 10
QNSL EKIG+
Sbjct: 313 QNSLEEKIGN 322


>sp|ILVC_SACI4|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 1 QNSLHEKIGD 10
QNSL EKIG+
Sbjct: 313 QNSLEEKIGN 322


>sp|ILVC_SACI3|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 QNSLHEKIGD 10
QNSL EKIG+
Sbjct: 313 QNSLEEKIGN 322


>sp|ILVC_SACI1|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 QNSLHEKIGD 10
QNSL EKIG+
Sbjct: 313 QNSLEEKIGN 322


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 4 LHEKIGD 10
LHEKIGD
Sbjct: 64 LHEKIGD 70


>sp|Y1656_METJA|UNCHARACTERIZED protein MJ1656|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NSLHEKIGD 10
NS+ +KIGD
Sbjct: 20 NSIKQKIGD 28


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QNSLHEK 7
QNSL+EK
Sbjct: 393 QNSLYEK 399


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QNSLHEKIGD 10
+N+L+ KIGD
Sbjct: 460 ENTLNIKIGD 469


>sp|PRIS_METMA|DNA primase small subunit PriS|Methanosarcina mazei (strain ATCC

Query: 5 HEKIGD 10
HEK+GD
Sbjct: 251 HEKVGD 256


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 LHEKIGD 10
LHE+ GD
Sbjct: 263 LHERFGD 269


>sp|RL11_AERPE|LARGE ribosomal subunit protein uL11|Aeropyrum pernix (strain ATCC

Query: 2 NSLHEKIGD 10
+ +H+KIGD
Sbjct: 27 DPIHQKIGD 35


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 LHEKIGD 10
LH KIGD
Sbjct: 268 LHPKIGD 274


>sp|PRIS_METAC|DNA primase small subunit PriS|Methanosarcina acetivorans (strain ATCC

Query: 5 HEKIGD 10
HEK+GD
Sbjct: 251 HEKVGD 256


>sp|RL11_HYPBU|LARGE ribosomal subunit protein uL11|Hyperthermus butylicus (strain DSM

Query: 2 NSLHEKIGD 10
+ +H+KIGD
Sbjct: 89 DPMHQKIGD 97


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 2 NSLHEKIGD 10
NSL KIGD
Sbjct: 11 NSLLAKIGD 19


>sp|METXA_METVS|HOMOSERINE O-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QNSLHEKIG 9
++S+HEK G
Sbjct: 231 KDSMHEKFG 239


>sp|ALBA2_SACS2|DNA/RNA-BINDING protein Alba 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NSLHEKIGD 10
NSL +++GD
Sbjct: 51 NSLKDRLGD 59


>sp|ALBA2_SACSH|DNA/RNA-BINDING protein Alba 2|Saccharolobus shibatae (strain ATCC 51178

Query: 2 NSLHEKIGD 10
NSL +++GD
Sbjct: 51 NSLKDRLGD 59


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 2 NSLHEKIG 9
+SLH K+G
Sbjct: 293 SSLHSKVG 300


>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SLHEKIGD 10
S H+K GD
Sbjct: 199 SYHDKFGD 206


>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 SLHEKIG 9
S+HEK G
Sbjct: 234 SMHEKFG 240




78|Sequence|386|395|EKIGDEDGHF

>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EKIGDEDGHF 10
EK G+EDG F
Sbjct: 588 EKFGEEDGRF 597


>sp|RS5_NANEQ|SMALL ribosomal subunit protein uS5|Nanoarchaeum equitans (strain

Query: 3 IGDEDGH 9
+GD+DGH
Sbjct: 89 VGDKDGH 95


>sp|Y240_METJA|PUTATIVE adenylate cyclase MJ0240|Methanocaldococcus jannaschii (strain

Query: 2 KIGDEDGHF 10
+I DEDG+F
Sbjct: 53 RIRDEDGNF 61


>sp|HIS3_METB6|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanoregula boonei (strain DSM 21154

Query: 2 KIGDEDGHF 10
K G+E GHF
Sbjct: 56 KKGEESGHF 64


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 2 KIGDEDG 8
K+GDE+G
Sbjct: 280 KLGDEEG 286


>sp|AROK_HALSA|SHIKIMATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 IGDEDG 8
+GDEDG
Sbjct: 251 VGDEDG 256


>sp|AROK_HALS3|SHIKIMATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 3 IGDEDG 8
+GDEDG
Sbjct: 251 VGDEDG 256


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKIGDEDGHF 10
EK+ DED F
Sbjct: 414 EKLKDEDTKF 423


>sp|AATF_METTH|A-TYPE ATP synthase subunit F|Methanothermobacter thermautotrophicus

Query: 1 EKIGDEDGHF 10
EKIGDE F
Sbjct: 53 EKIGDELREF 62


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKIGDED 7
EKIGDE+
Sbjct: 304 EKIGDEN 310


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 1 EKIGDEDGHF 10
E +GD +G F
Sbjct: 381 ENVGDSEGSF 390




79|Sequence|391|400|EDGHFPAHRE

>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 2 DGHFPAHR 9
DGHFP++R
Sbjct: 285 DGHFPSNR 292


>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 2 DGHFPAHR 9
DG+FPAH+
Sbjct: 202 DGNFPAHQ 209


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DGHFPA 7
DGHFPA
Sbjct: 195 DGHFPA 200


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DGHFPA 7
DGHFPA
Sbjct: 195 DGHFPA 200


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 2 DGHFPA 7
DGHFPA
Sbjct: 195 DGHFPA 200


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 2 DGHFPAH 8
DGHFPA
Sbjct: 209 DGHFPAR 215


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 2 DGHFPAHR 9
DGHFP +
Sbjct: 197 DGHFPGRK 204


>sp|Y2294_THEKO|UPF0128 protein TK2294|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EDGHFPAHRE 10
EDG+FP +E
Sbjct: 99 EDGNFPLAKE 108


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 2 DGHFPA 7
DG+FPA
Sbjct: 195 DGYFPA 200


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EDGHF 5
EDGHF
Sbjct: 91 EDGHF 95


>sp|MALE_THELN|TREHALOSE/MALTOSE-BINDING protein MalE|Thermococcus litoralis (strain ATCC 51850

Query: 4 HFPAHR 9
HFP H+
Sbjct: 322 HFPGHK 327


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 2 DGHFPAH 8
DGHFP
Sbjct: 201 DGHFPGR 207


>sp|UPPS_SULAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (GGDP specific)|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EDGHFPAH 8
+DG FP H
Sbjct: 27 KDGPFPFH 34


>sp|DHQS_METBU|3-DEHYDROQUINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EDGHFPAHRE 10
+ GH+ AH++
Sbjct: 10 DKGHWEAHKD 19


>sp|XERA_PYRAB|TYROSINE recombinase XerA|Pyrococcus abyssi (strain GE5 /

Query: 1 EDGHFPAHRE 10
E+GH P R+
Sbjct: 42 EEGHSPTARD 51


>sp|MTIP_METAC|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanosarcina acetivorans

Query: 1 EDGHFPAHR 9
E+ H P HR
Sbjct: 56 EEIHIPPHR 64


>sp|UPP_NATPD|URACIL phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EDGHFP 6
EDG FP
Sbjct: 119 EDGEFP 124


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EDGHFPA 7
E+GHF A
Sbjct: 265 EEGHFKA 271


>sp|NADA_METMA|QUINOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DGHFPAHRE 10
+GH P H +
Sbjct: 168 EGHCPTHHQ 176




80|Sequence|396|405|PAHREVMLSM

>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 1 PAHREVM 7
P HREV+
Sbjct: 193 PLHREVL 199




81|Sequence|401|410|VMLSMLMHSS

>sp|AOCD_METMP|ORNITHINE cyclodeaminase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VMLSMLMHS 9
+MLS L+HS
Sbjct: 348 IMLSTLLHS 356




82|Sequence|406|415|LMHSSSKEVF

>sp|RL12_METJA|LARGE ribosomal subunit protein P1|Methanocaldococcus jannaschii

Query: 1 LMHSSSKEV 9
L+HS+ KE+
Sbjct: 9 LLHSAGKEI 17


>sp|RL12_ARCFU|LARGE ribosomal subunit protein P1|Archaeoglobus fulgidus (strain ATCC

Query: 1 LMHSSSKEV 9
L+HS+ KE+
Sbjct: 9 LLHSAGKEI 17


>sp|RL12_SACS2|LARGE ribosomal subunit protein P1|Saccharolobus solfataricus (strain

Query: 1 LMHSSSKEV 9
L+HS+ KE+
Sbjct: 9 LLHSAKKEI 17


>sp|RL12_METTL|LARGE ribosomal subunit protein P1|Methanothermococcus

Query: 1 LMHSSSKEV 9
L+HS+ KE+
Sbjct: 9 LLHSAGKEI 17




83|Sequence|411|420|SKEVFQASAN

>sp|SODF_SULAC|SUPEROXIDE dismutase [Fe]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KEVFQASAN 10
K+VF SAN
Sbjct: 121 KQVFSESAN 129




84|Sequence|416|425|QASANALSTL

***** No hits found ******


85|Sequence|421|430|ALSTLLEQNV

>sp|MCRB_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 1 ALSTLLEQ 8
ALST+LEQ
Sbjct: 213 ALSTILEQ 220


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 4 TLLEQNV 10
TLLE+NV
Sbjct: 752 TLLEENV 758


>sp|MCRB_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 ALSTLLEQ 8
ALST+LEQ
Sbjct: 213 ALSTILEQ 220




86|Sequence|426|435|LEQNVNFRKI

>sp|DAPA_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LEQNVNF 7
LEQN+NF
Sbjct: 22 LEQNINF 28


>sp|GGR_METS3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 QNVNFRKI 10
Q+VNF KI
Sbjct: 362 QDVNFEKI 369


>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 EQNVNFRK 9
E+N+ FRK
Sbjct: 322 EENIRFRK 329


>sp|DAPA_METJA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEQNVNF 7
LE+N+NF
Sbjct: 23 LEENINF 29




87|Sequence|431|440|NFRKILLSKG

>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NFRKILLSKG 10
NF +ILLSKG
Sbjct: 182 NFARILLSKG 191


>sp|ASPD_METHJ|L-ASPARTATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NFRKILL 7
NFRKILL
Sbjct: 97 NFRKILL 103


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RKILLSKG 10
R+IL SKG
Sbjct: 283 RRILFSKG 290


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM 12597

Query: 3 RKILLSKG 10
RKILLS G
Sbjct: 190 RKILLSSG 197


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 NFRKILLSKG 10
NFRK SKG
Sbjct: 41 NFRKEAESKG 50


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 1 NFRKIL 6
NFRKIL
Sbjct: 425 NFRKIL 430


>sp|RS19_NANEQ|SMALL ribosomal subunit protein uS19|Nanoarchaeum equitans (strain

Query: 2 FRKILLSK 9
F+KILL+K
Sbjct: 56 FKKILLAK 63


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 1 NFRKILLSK 9
FRK+LL+K
Sbjct: 184 EFRKLLLNK 192


>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NFRKILLS 8
NFRK+L S
Sbjct: 182 NFRKVLES 189




88|Sequence|436|445|LLSKGIHLNV

>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LSKGIHLNV 10
L KG+H+NV
Sbjct: 155 LRKGMHINV 163


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SKGIHLNV 10
SKGIH++V
Sbjct: 660 SKGIHISV 667


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 KGIHLN 9
KG+HLN
Sbjct: 178 KGVHLN 183


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 LLSKGIHL 8
L+ KGIHL
Sbjct: 361 LIDKGIHL 368


>sp|Y664_METJA|UNCHARACTERIZED protein MJ0664|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLSKGIHLN 9
+LSK +H N
Sbjct: 21 ILSKDLHFN 29




89|Sequence|441|450|IHLNVLELMQ

***** No hits found ******


90|Sequence|446|455|LELMQKHIHS

>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LELMQKHIH 9
LEL +K IH
Sbjct: 224 LELFEKMIH 232


>sp|RADB_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 LELMQKHIHS 10
L +++KH+H+
Sbjct: 185 LAILEKHLHA 194


>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 1 LELMQKHI 8
LEL+ KH+
Sbjct: 368 LELLNKHV 375


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 1 LELMQKHI 8
LEL +KH+
Sbjct: 232 LELFRKHV 239


>sp|CDC63_HALSA|ORC1-TYPE DNA replication protein 3|Halobacterium salinarum (strain ATCC

Query: 1 LELMQKHI 8
LEL+ KH+
Sbjct: 56 LELLNKHV 63


>sp|Y1524_METJA|UPF0166 protein MJ1524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELMQKHI 8
ELM KHI
Sbjct: 20 ELMYKHI 26




91|Sequence|451|460|KHIHSPEVAE

>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 1 KHIHSPEVAE 10
KH HSPE+ +
Sbjct: 206 KHRHSPEIGK 215


>sp|ARGC_METM5|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C5 /

Query: 1 KHIHSPEVAE 10
KH HSPE+ +
Sbjct: 206 KHRHSPEIGK 215


>sp|ARGC_METMP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KHIHSPEVAE 10
KH HSPE+ +
Sbjct: 206 KHRHSPEIGK 215


>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KHIHSPEVAE 10
KH HSPE+ +
Sbjct: 205 KHRHSPEIGK 214


>sp|RIFK_PYRFU|RIBOFLAVIN kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KHIHSPEVAE 10
+ IH P++AE
Sbjct: 179 RTIHPPKIAE 188


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 1 KHIHSPEVAE 10
K+I +PEVA+
Sbjct: 419 KYIKTPEVAK 428


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HIHSPEVAE 10
H H+PE+ E
Sbjct: 204 HRHTPEIRE 212


>sp|RIFK_THEKO|RIBOFLAVIN kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KHIHSPEVAE 10
+ IH P +AE
Sbjct: 177 RTIHPPRIAE 186


>sp|RIFK_PYRHO|RIBOFLAVIN kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KHIHSPEVAE 10
+ +H P++AE
Sbjct: 179 RTVHPPKIAE 188


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 KHIHSPEVAE 10
KH+ SP VA+
Sbjct: 254 KHLPSPNVAQ 263


>sp|RIFK_PYRAB|RIBOFLAVIN kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 KHIHSPEVAE 10
+ +H P++AE
Sbjct: 179 RTVHPPKIAE 188


>sp|ARGC_METM6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C6 /

Query: 1 KHIHSPEVAE 10
H HSPE+ +
Sbjct: 206 NHRHSPEIGK 215


>sp|LYSY_PICTO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 HIHSPEVAE 10
H H+PE+ +
Sbjct: 207 HRHTPEIEQ 215




92|Sequence|456|465|PEVAESGCKM

>sp|PGP_AERPE|PHOSPHOGLYCOLATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PEVAESGC 8
P VAE+GC
Sbjct: 69 PVVAENGC 76


>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 1 PEVAESG 7
PEV ESG
Sbjct: 140 PEVEESG 146




93|Sequence|461|470|SGCKMLNHLF

>sp|Y1681_METJA|UNCHARACTERIZED protein MJ1681|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SGCKMLNHL 9
SGC MLN L
Sbjct: 164 SGCGMLNPL 172


>sp|HIS2_METMA|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CKMLNH 8
CK+LNH
Sbjct: 30 CKLLNH 35


>sp|HIS2_METBF|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosarcina barkeri (strain Fusaro /

Query: 3 CKMLNH 8
CK+LNH
Sbjct: 30 CKLLNH 35


>sp|HIS2_METAC|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CKMLNH 8
CK+LNH
Sbjct: 30 CKLLNH 35


>sp|END3_METJA|ENDONUCLEASE III|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SGCKMLNHLF 10
S CK +HLF
Sbjct: 331 SDCKCKSHLF 340




94|Sequence|466|475|LNHLFEGSNT

>sp|TRM56_METMJ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoculleus marisnigri

Query: 1 LNHLFEG 7
L+HLFEG
Sbjct: 142 LDHLFEG 148


>sp|Y1453_METJA|UNCHARACTERIZED protein MJ1453|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HLFEGSNT 10
HLF GS+T
Sbjct: 32 HLFSGSHT 39


>sp|TRM56_METLZ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocorpusculum labreanum

Query: 1 LNHLFEG 7
L+HL+EG
Sbjct: 145 LDHLYEG 151


>sp|TRM56_META3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus aeolicus

Query: 1 LNHLFEGSN 9
L+ LFEGS+
Sbjct: 148 LDRLFEGSS 156


>sp|FOLD_CENSY|BIFUNCTIONAL protein FolD|Cenarchaeum symbiosum (strain A)

Query: 1 LNHLFEGSN 9
L+HLF G N
Sbjct: 169 LHHLFLGRN 177


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LNHLFEG 7
+NHL EG
Sbjct: 174 MNHLIEG 180


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HLFEGS 8
HLF+GS
Sbjct: 683 HLFDGS 688


>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LNHLFEGSNT 10
LN++ E +NT
Sbjct: 31 LNNILENANT 40




95|Sequence|471|480|EGSNTSLDIM

>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GSNTSLDIM 10
G +TSLD+M
Sbjct: 361 GFSTSLDLM 369


>sp|PYRH_METMJ|URIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GSNTSLDIM 10
G+NT LDI+
Sbjct: 179 GANTVLDIV 187




96|Sequence|476|485|SLDIMAAVVP

***** No hits found ******


97|Sequence|481|490|AAVVPKILTV

***** No hits found ******


98|Sequence|486|495|KILTVMKRHE

>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 1 KILTVMKRH 9
K+L +M+RH
Sbjct: 833 KLLDIMERH 841


>sp|RL29_METMP|LARGE ribosomal subunit protein uL29|Methanococcus maripaludis (strain

Query: 1 KILTVMKRHE 10
+ILT+MK E
Sbjct: 56 RILTIMKEKE 65


>sp|RL1_METS3|LARGE ribosomal subunit protein uL1|Methanobrevibacter smithii (strain

Query: 2 ILTVMKRH 9
+LTV+ RH
Sbjct: 181 VLTVLDRH 188


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 ILTVMKRHE 10
+L +MK HE
Sbjct: 210 LLEIMKEHE 218


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 4 TVMKRHE 10
TVM+RH+
Sbjct: 44 TVMRRHK 50


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 1 KILTVMKRHE 10
K+LTVM+ H+
Sbjct: 503 KLLTVMEVHD 512


>sp|RPO1C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 2 ILTVMKRHE 10
I VMK+HE
Sbjct: 96 IAEVMKKHE 104


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 1 KILTVMKRHE 10
K+ V+K HE
Sbjct: 460 KVTDVLKHHE 469




99|Sequence|491|500|MKRHETSLPV

>sp|RS13_METST|SMALL ribosomal subunit protein uS13|Methanosphaera stadtmanae (strain

Query: 2 KRHETSLPV 10
KRHE LPV
Sbjct: 120 KRHEVGLPV 128


>sp|RS13_METS3|SMALL ribosomal subunit protein uS13|Methanobrevibacter smithii (strain

Query: 2 KRHETSLPV 10
+RHE LPV
Sbjct: 119 RRHEAGLPV 127


>sp|RS13_METTH|SMALL ribosomal subunit protein uS13|Methanothermobacter

Query: 2 KRHETSLPV 10
+RHE LPV
Sbjct: 119 RRHELGLPV 127


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 RHETSLPV 10
RHE LP+
Sbjct: 747 RHEADLPL 754


>sp|RS13_PYRFU|SMALL ribosomal subunit protein uS13|Pyrococcus furiosus (strain ATCC

Query: 3 RHETSLPV 10
RHE LPV
Sbjct: 119 RHELGLPV 126


>sp|RS13_PYRAB|SMALL ribosomal subunit protein uS13|Pyrococcus abyssi (strain GE5 /

Query: 3 RHETSLPV 10
RHE LPV
Sbjct: 119 RHELGLPV 126


>sp|RS13_PYRHO|SMALL ribosomal subunit protein uS13|Pyrococcus horikoshii (strain ATCC

Query: 3 RHETSLPV 10
RHE LPV
Sbjct: 119 RHELGLPV 126


>sp|RS13_THEKO|SMALL ribosomal subunit protein uS13|Thermococcus kodakarensis (strain

Query: 3 RHETSLPV 10
RHE LPV
Sbjct: 120 RHELGLPV 127


>sp|RS13_METKA|SMALL ribosomal subunit protein uS13|Methanopyrus kandleri (strain AV19 /

Query: 3 RHETSLPV 10
RHE LPV
Sbjct: 123 RHELGLPV 130




100|Sequence|496|505|TSLPVQLEAL

>sp|HMDH_HALS3|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TSLPVQLEAL 10
T+LP Q EAL
Sbjct: 344 TTLPTQREAL 353


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LPVQLEA 9
LPV+LEA
Sbjct: 94 LPVELEA 100


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LPVQLEA 9
LPV+LEA
Sbjct: 94 LPVELEA 100


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 LPVQLEA 9
LPV+LEA
Sbjct: 95 LPVELEA 101


>sp|HMDH_SACS2|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TSLPVQLEAL 10
T LP Q EAL
Sbjct: 344 TRLPTQKEAL 353


>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 1 TSLPVQLEA 9
LP+QLEA
Sbjct: 81 AKLPLQLEA 89




101|Sequence|501|510|QLEALRAILH

>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QLEALRAILH 10
++EALR ILH
Sbjct: 127 EIEALREILH 136


>sp|ALF1_AERPE|PROBABLE fructose-bisphosphate aldolase class 1|Aeropyrum pernix (strain

Query: 2 LEALRAILH 10
++A+RAI+H
Sbjct: 251 VKAIRAIVH 259


>sp|DHYS_PYRCJ|PROBABLE deoxyhypusine synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 EALRAILH 10
EALR I+H
Sbjct: 202 EALREIVH 209




102|Sequence|506|515|RAILHFIVPG

>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 AILHFIVPG 10
A+ HF VPG
Sbjct: 154 AVSHFGVPG 162


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 HFIVPG 10
HF++PG
Sbjct: 140 HFLMPG 145


>sp|HPPA_PYRAE|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Pyrobaculum aerophilum (strain

Query: 1 RAILHFIVPG 10
RA+ F++PG
Sbjct: 594 RALGEFLIPG 603




103|Sequence|511|520|FIVPGMPEES

>sp|Y439_PYRHO|PROTEIN PH0439|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FIVPGMPEE 9
FI+PGMP E
Sbjct: 158 FILPGMPRE 166


>sp|Y476_PYRFU|PROTEIN PF0476|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FIVPGMPEE 9
F++PGMP E
Sbjct: 155 FVLPGMPRE 163


>sp|Y1593_PYRAB|PROTEIN PYRAB15930|Pyrococcus abyssi (strain GE5 /

Query: 1 FIVPGMPEE 9
F++PGMP E
Sbjct: 155 FVLPGMPRE 163


>sp|Y1472_THEKO|PROTEIN TK1472|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FIVPGMPEE 9
F++PGMP E
Sbjct: 155 FVLPGMPRE 163


>sp|COFE_HALLT|COENZYME F420:L-glutamate ligase|Halorubrum lacusprofundi (strain ATCC

Query: 1 FIVPGMPE 8
F VPG+PE
Sbjct: 4 FAVPGLPE 11


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PGMPEES 10
PG+PEE+
Sbjct: 167 PGIPEET 173


>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 PGMPEE 9
PG+PEE
Sbjct: 229 PGLPEE 234


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IVPGMP 7
++PGMP
Sbjct: 168 LIPGMP 173


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 2 IVPGMPE 8
++PG+PE
Sbjct: 6 VIPGIPE 12


>sp|PAND_PYRIL|ASPARTATE 1-decarboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FIVPGMPEE 9
+++PG P E
Sbjct: 57 YVIPGRPGE 65


>sp|CBIT_SACS2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 FIVPGMPE 8
+++PG+P+
Sbjct: 5 YVIPGIPD 12


>sp|CBIT_SACI1|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 FIVPGMPE 8
+++PG+P+
Sbjct: 5 YVIPGIPD 12


>sp|CBIT_SACI7|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 FIVPGMPE 8
+++PG+P+
Sbjct: 5 YVIPGIPD 12


>sp|CBIT_SACI6|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 FIVPGMPE 8
+++PG+P+
Sbjct: 5 YVIPGIPD 12


>sp|CBIT_SACI4|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 FIVPGMPE 8
+++PG+P+
Sbjct: 5 YVIPGIPD 12


>sp|CBIT_SACI3|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 FIVPGMPE 8
+++PG+P+
Sbjct: 5 YVIPGIPD 12


>sp|CBIT_SACI2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 FIVPGMPE 8
+++PG+P+
Sbjct: 5 YVIPGIPD 12


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 4 PGMPEE 9
PGMP E
Sbjct: 61 PGMPSE 66


>sp|Y487_THEAC|PROTEIN Ta0487|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FIVPGMPEE 9
I+PG+P+E
Sbjct: 146 IILPGVPKE 154


>sp|TRPA_HALVD|TRYPTOPHAN synthase alpha chain|Haloferax volcanii (strain ATCC 29605

Query: 1 FIVPGMPEE 9
F+VP +P E
Sbjct: 121 FVVPDLPAE 129


>sp|TRPA_NATPD|TRYPTOPHAN synthase alpha chain|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FIVPGMPEE 9
F+VP +P E
Sbjct: 122 FVVPDLPAE 130


>sp|CBIT_SULAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 VPGMPEE 9
VPG+P+E
Sbjct: 3 VPGIPDE 9


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PGMPE 8
PGMPE
Sbjct: 440 PGMPE 444


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PGMPE 8
PGMPE
Sbjct: 444 PGMPE 448


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PGMPE 8
PGMPE
Sbjct: 444 PGMPE 448


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PGMPE 8
PGMPE
Sbjct: 444 PGMPE 448


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 PGMPE 8
PGMPE
Sbjct: 444 PGMPE 448


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PGMPE 8
PGMPE
Sbjct: 444 PGMPE 448


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 4 PGMPEE 9
PG+PEE
Sbjct: 81 PGIPEE 86


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PGMPEE 9
PG+PEE
Sbjct: 81 PGIPEE 86


>sp|CBIT_PYRCJ|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 FIVPGMPEE 9
+ PG+P+E
Sbjct: 5 YATPGIPDE 13




104|Sequence|516|525|MPEESREDTE

>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MPEESREDTE 10
+PEESR+D E
Sbjct: 468 IPEESRKDFE 477


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 MPEESREDTE 10
+PEE+R+D E
Sbjct: 476 IPEETRKDFE 485


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PEESREDTE 10
P+E+RE+ E
Sbjct: 345 PDETREEVE 353


>sp|PSB1_HALMA|PROTEASOME subunit beta 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 MPEESREDTE 10
+PE+S +D+E
Sbjct: 31 LPEQSAQDSE 40


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PEESREDTE 10
P SRED E
Sbjct: 404 PNYSREDVE 412


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 MPEESREDTE 10
+PEE+RE E
Sbjct: 641 IPEEARERIE 650


>sp|RL18A_PYRIL|LARGE ribosomal subunit protein eL20|Pyrobaculum islandicum (strain DSM

Query: 2 PEESREDT 9
PEE+R D+
Sbjct: 58 PEEARSDS 65


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 1 MPEESREDT 9
MP SRED
Sbjct: 203 MPNPSREDA 211


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 2 PEESREDT 9
PE SRED
Sbjct: 103 PEVSREDA 110




105|Sequence|521|530|REDTEFHHKL

>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 TEFHHKL 10
TEFHH L
Sbjct: 102 TEFHHPL 108


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 4 TEFHHK 9
+EFHHK
Sbjct: 57 SEFHHK 62


>sp|OGT_SACS2|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 TEFHHKL 10
TEF HKL
Sbjct: 43 TEFFHKL 49


>sp|OGT_SACI7|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 TEFHHKL 10
TEF HKL
Sbjct: 43 TEFFHKL 49


>sp|OGT_SACI6|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 TEFHHKL 10
TEF HKL
Sbjct: 43 TEFFHKL 49


>sp|OGT_SACI4|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 TEFHHKL 10
TEF HKL
Sbjct: 43 TEFFHKL 49


>sp|OGT_SACI3|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 4 TEFHHKL 10
TEF HKL
Sbjct: 43 TEFFHKL 49


>sp|OGT_SACI2|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 TEFHHKL 10
TEF HKL
Sbjct: 43 TEFFHKL 49


>sp|OGT_SACI1|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 TEFHHKL 10
TEF HKL
Sbjct: 43 TEFFHKL 49


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 REDTEFHHK 9
RE EF+HK
Sbjct: 71 RELVEFYHK 79


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 1 REDTEFHHKL 10
RED + +HKL
Sbjct: 165 REDGDCNHKL 174


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 REDTEFHHKL 10
RE EF HK+
Sbjct: 112 REIVEFQHKI 121


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 5 EFHHKL 10
EFHHK+
Sbjct: 382 EFHHKI 387


>sp|PELO_METHJ|PROTEIN pelota homolog|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EDTEFH 7
ED EFH
Sbjct: 70 EDVEFH 75


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 2 EDTEFHHK 9
E T+FH K
Sbjct: 78 EQTQFHRK 85


>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 1 REDTEFHHK 9
R+D EFH
Sbjct: 113 RDDVEFHQP 121


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 2 EDTEFHHK 9
E+T+FH K
Sbjct: 78 EETQFHRK 85


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain

Query: 2 EDTEFHHK 9
E+T+FH K
Sbjct: 78 EETQFHRK 85


>sp|Y3024_HALLT|UNCHARACTERIZED protein Hlac_3024|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 DTEFHHKL 10
++E HHK+
Sbjct: 72 ESEMHHKM 79


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro

Query: 2 EDTEFHHK 9
E+T+FH K
Sbjct: 78 EETQFHRK 85


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 1 REDTEFHHKL 10
RE EF H++
Sbjct: 112 REIVEFQHRI 121




106|Sequence|526|535|FHHKLNMVKK

>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 1 FHHKLN 6
FHHK+N
Sbjct: 383 FHHKIN 388


>sp|PELO_HALMA|PROTEIN pelota homolog|Haloarcula marismortui (strain ATCC 43049

Query: 1 FHHKLNM 7
FHH LN+
Sbjct: 99 FHHTLNV 105


>sp|HIS3_META3|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FHHKLNM 7
FH+KLN+
Sbjct: 108 FHYKLNL 114


>sp|Y3404_METJA|UNCHARACTERIZED protein MJECS04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FHHKLNMVKK 10
F ++LN +KK
Sbjct: 43 FENELNFIKK 52


>sp|LEU3_METTH|3-ISOPROPYLMALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 HKLNMVKK 10
HK N++KK
Sbjct: 166 HKANVLKK 173




107|Sequence|531|540|NMVKKQCFKN

>sp|Y601_METMP|PROBABLE minor pilin MMP0601|Methanococcus maripaludis (strain DSM 14266

Query: 3 VKKQCFKN 10
VKKQ FK+
Sbjct: 45 VKKQTFKS 52


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 NMVKKQC 7
N V+KQC
Sbjct: 12 NFVRKQC 18


>sp|MPTA_METJA|GTP cyclohydrolase MptA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NMVKKQCFKN 10
N++K+ C KN
Sbjct: 165 NLIKEICIKN 174


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 3 VKKQCFKN 10
+K++C KN
Sbjct: 865 IKEKCLKN 872




108|Sequence|536|545|QCFKNDIHKL

>sp|SELB_METJA|SELENOCYSTEINE-SPECIFIC elongation factor|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QCFKNDI 7
QCFK D+
Sbjct: 237 QCFKQDV 243


>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CFKNDIH 8
C KNDIH
Sbjct: 486 CLKNDIH 492


>sp|RS14Z_METJA|SMALL ribosomal subunit protein uS14|Methanocaldococcus jannaschii

Query: 1 QCFKNDIHKL 10
QCF+ HKL
Sbjct: 38 QCFREIAHKL 47


>sp|F16PA_METB6|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanoregula boonei (strain DSM 21154

Query: 2 CFKNDIHKL 10
CF D+H++
Sbjct: 213 CFVADVHQI 221


>sp|AOCD_METMP|ORNITHINE cyclodeaminase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QCFKNDI 7
QC KN+I
Sbjct: 303 QCIKNNI 309


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QCFKNDIHK 9
+CFK DI +
Sbjct: 60 ECFKKDIER 68


>sp|HCGC_METJA|6-CARBOXYMETHYL-5-METHYL-4-HYDROXYPYRIDIN-2-OL 3-C-methyltransferase HcgC|Methanocaldococcus jannaschii (strain

Query: 4 KNDIHKL 10
+NDIHK
Sbjct: 223 ENDIHKF 229


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 FKNDIHKL 10
F+ND+H L
Sbjct: 244 FENDMHVL 251


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 KNDIHKL 10
K+DIH+L
Sbjct: 119 KSDIHRL 125


>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 QCFKNDI 7
+C KND+
Sbjct: 298 ECVKNDV 304


>sp|Y523_METJA|UNCHARACTERIZED protein MJ0523|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KNDIHKL 10
KND+H L
Sbjct: 34 KNDLHAL 40




109|Sequence|541|550|DIHKLVLAAL

>sp|PNPH_PYRFU|6-OXOPURINE nucleoside phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DIHKLVLAAL 10
DI KL+LAA+
Sbjct: 236 DIVKLILAAI 245




110|Sequence|546|555|VLAALNRFIG

>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLAALNRFI 9
VLAA+ +FI
Sbjct: 194 VLAAIEKFI 202


>sp|SFSA_PYRNV|SUGAR fermentation stimulation protein homolog|Pyrobaculum neutrophilum

Query: 5 LNRFIG 10
LNRF+G
Sbjct: 21 LNRFVG 26


>sp|Y425_METJA|UNCHARACTERIZED protein MJ0425|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLAALNRFIG 10
+LA+LN + G
Sbjct: 24 ILASLNEYYG 33


>sp|SFSA_PYRIL|SUGAR fermentation stimulation protein homolog|Pyrobaculum islandicum

Query: 5 LNRFIG 10
LNRF+G
Sbjct: 18 LNRFVG 23




111|Sequence|551|560|NRFIGNPGIQ

>sp|Y812_METJA|UNCHARACTERIZED protein MJ0812|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FIGNPGI 9
F+GNPG+
Sbjct: 35 FLGNPGV 41


>sp|Y079_METJA|UNCHARACTERIZED protein MJ0079|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FIGNPGI 9
F+GNPG+
Sbjct: 41 FLGNPGV 47


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RFIGNPGI 9
+FIG PGI
Sbjct: 46 QFIGKPGI 53


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RFIGNPGI 9
+FIG PGI
Sbjct: 46 QFIGKPGI 53


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RFIGNPGI 9
+FIG PGI
Sbjct: 46 QFIGKPGI 53


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 RFIGNPGI 9
+FIG PGI
Sbjct: 46 QFIGKPGI 53


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 3 FIGNPGI 9
FIG+PGI
Sbjct: 354 FIGSPGI 360


>sp|PYRDB_SULAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Sulfolobus acidocaldarius

Query: 4 IGNPGIQ 10
+GNPGIQ
Sbjct: 71 LGNPGIQ 77


>sp|Y932_METKA|UNCHARACTERIZED protein MK0932|Methanopyrus kandleri (strain AV19 /

Query: 2 RFIGNPG 8
RFIG PG
Sbjct: 89 RFIGGPG 95


>sp|THIO_METTM|PROBABLE Thioredoxin|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 RFIGNPG 8
RF+G PG
Sbjct: 66 RFVGAPG 72


>sp|HMGCS_METAR|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 RFIGNPG 8
RF G+PG
Sbjct: 199 RFTGDPG 205


>sp|COBQ_METMJ|PROBABLE cobyric acid synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NRFIGNPGI 9
N+F G+PG+
Sbjct: 194 NKFRGDPGL 202


>sp|CSG_HALJT|CELL surface glycoprotein|Haloarcula japonica (strain ATCC 49778

Query: 2 RFIGNPGIQ 10
R+ NPG++
Sbjct: 115 RYTANPGVE 123


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 FIGNPG 8
FIG+PG
Sbjct: 50 FIGDPG 55


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 RFIGNP 7
+FIGNP
Sbjct: 47 QFIGNP 52


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 RFIGNP 7
+FIGNP
Sbjct: 47 QFIGNP 52


>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 3 FIGNPG 8
F GNPG
Sbjct: 108 FTGNPG 113


>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 2 RFIGNPG 8
+F+ NPG
Sbjct: 136 KFVANPG 142


>sp|BASB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 3 FIGNPG 8
FIG+PG
Sbjct: 236 FIGSPG 241


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FIGNPGI 9
FIGNP +
Sbjct: 50 FIGNPPV 56


>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FIGNPG 8
++GNPG
Sbjct: 243 YVGNPG 248


>sp|CSM4_METJA|CRISPR system Cms protein Csm4|Methanocaldococcus jannaschii (strain

Query: 5 GNPGIQ 10
GNPGI+
Sbjct: 88 GNPGIK 93




112|Sequence|556|565|NPGIQKCGLK

>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 2 PGIQKC 7
PGI+KC
Sbjct: 280 PGIRKC 285


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 NPGIQK 6
NPGI+K
Sbjct: 2 NPGIEK 7


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain ATCC

Query: 3 GIQKCGLK 10
GIQ+ GLK
Sbjct: 172 GIQRFGLK 179


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NPGIQKC 7
NP ++KC
Sbjct: 469 NPPVEKC 475


>sp|LYSK_SACI3|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 QKCGLK 10
Q+CGLK
Sbjct: 248 QECGLK 253


>sp|LYSK_SACI1|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 QKCGLK 10
Q+CGLK
Sbjct: 248 QECGLK 253


>sp|LYSK_SACI7|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 QKCGLK 10
Q+CGLK
Sbjct: 248 QECGLK 253


>sp|LYSK_SACI4|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 QKCGLK 10
Q+CGLK
Sbjct: 248 QECGLK 253


>sp|LYSK_SACI2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 QKCGLK 10
Q+CGLK
Sbjct: 248 QECGLK 253


>sp|LYSK_SACI6|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 QKCGLK 10
Q+CGLK
Sbjct: 248 QECGLK 253


>sp|PDXT_METBF|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina barkeri (strain

Query: 2 PGIQKCG 8
PGI CG
Sbjct: 146 PGIVSCG 152


>sp|ACDG2_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 1 NPGIQKCGLK 10
NP + K GL+
Sbjct: 170 NPAVLKAGLE 179


>sp|ACDG1_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 1 NPGIQKCGLK 10
NP + K GL+
Sbjct: 170 NPAVLKAGLE 179


>sp|ACDG_METAC|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 NPGIQKCGLK 10
NP + K GL+
Sbjct: 169 NPAVLKAGLE 178


>sp|ACDG2_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 NPGIQKCGLK 10
NP + K GL+
Sbjct: 169 NPAVLKAGLE 178


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GIQKCGLK 10
G ++CGLK
Sbjct: 434 GSKECGLK 441


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GIQKCGLK 10
G ++CGLK
Sbjct: 434 GSKECGLK 441


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GIQKCGLK 10
G ++CGLK
Sbjct: 434 GSKECGLK 441


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GIQKCGLK 10
G ++CGLK
Sbjct: 434 GSKECGLK 441


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GIQKCGLK 10
G ++CGLK
Sbjct: 434 GSKECGLK 441


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GIQKCGLK 10
G ++CGLK
Sbjct: 434 GSKECGLK 441


>sp|ACDG1_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 NPGIQKCGLK 10
NP + K GL+
Sbjct: 169 NPAVLKAGLE 178


>sp|Y1159_THEAC|UPF0179 protein Ta1159|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PGIQKCGL 9
P I+KC L
Sbjct: 107 PNIEKCNL 114


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GIQKCGLK 10
G ++CGLK
Sbjct: 429 GEEECGLK 436


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GIQKCGLK 10
GI+K GLK
Sbjct: 163 GIEKFGLK 170


>sp|Y1250_THEVO|UPF0179 protein TV1250|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PGIQKCGL 9
P I+KC L
Sbjct: 104 PNIEKCNL 111


>sp|PDXT_METMA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina mazei (strain

Query: 2 PGIQKCG 8
PGI CG
Sbjct: 146 PGIVSCG 152




113|Sequence|561|570|KCGLKVISSI

>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 KCGLKVISSI 10
KCG KV+ I
Sbjct: 521 KCGGKVVGRI 530


>sp|COFF_METJA|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanocaldococcus jannaschii

Query: 1 KCGLKVI 7
KCGLKV
Sbjct: 144 KCGLKVF 150


>sp|LYSK_SACI3|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KCGLKVI 7
+CGLK++
Sbjct: 249 ECGLKIV 255


>sp|LYSK_SACI7|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KCGLKVI 7
+CGLK++
Sbjct: 249 ECGLKIV 255


>sp|LYSK_SACI4|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KCGLKVI 7
+CGLK++
Sbjct: 249 ECGLKIV 255


>sp|LYSK_SACI2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KCGLKVI 7
+CGLK++
Sbjct: 249 ECGLKIV 255


>sp|LYSK_SACI1|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KCGLKVI 7
+CGLK++
Sbjct: 249 ECGLKIV 255


>sp|LYSK_SACI6|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KCGLKVI 7
+CGLK++
Sbjct: 249 ECGLKIV 255




114|Sequence|566|575|VISSIVHFPD

>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VISSIVHFPD 10
V++S+ H PD
Sbjct: 207 VMNSVAHLPD 216


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VISSIVHFP 9
VISS++H P
Sbjct: 693 VISSLLHNP 701


>sp|SYK_METHJ|LYSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VISSIVH 7
+ISSIVH
Sbjct: 286 IISSIVH 292


>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VISSIVHFPD 10
+IS+I H P+
Sbjct: 68 IISTITHNPE 77


>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 IVHFPD 10
++HFPD
Sbjct: 43 LMHFPD 48


>sp|CDPAS_METM7|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain C7 /

Query: 1 VISSIVHF 8
VIS I+HF
Sbjct: 155 VISPIIHF 162


>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VISSIVHFPD 10
V++ I HF D
Sbjct: 58 VVNQIYHFTD 67


>sp|CDPAS_METMP|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VISSIVHF 8
VIS I+HF
Sbjct: 155 VISPIIHF 162


>sp|CDPAS_METM6|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain C6 /

Query: 1 VISSIVHF 8
VIS I+HF
Sbjct: 155 VISPIIHF 162




115|Sequence|571|580|VHFPDALEML

>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VHFPDALEM 9
+HFPDA E+
Sbjct: 44 MHFPDACEV 52


>sp|PYRE_ARCFU|OROTATE phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 3 FPDALEML 10
FPD LEM+
Sbjct: 43 FPDILEMI 50


>sp|RS17_THEVO|SMALL ribosomal subunit protein uS17|Thermoplasma volcanium (strain

Query: 1 VHFPDALEM 9
VH PD +E+
Sbjct: 73 VHVPDCIEL 81


>sp|GYAR_AERPE|GLYOXYLATE reductase|Aeropyrum pernix (strain ATCC 700893

Query: 3 FPDALEML 10
FP+ALE+L
Sbjct: 13 FPEALELL 20


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 3 FPDALEML 10
+PDALE++
Sbjct: 155 YPDALEVV 162


>sp|Y516_METST|UPF0173 metal-dependent hydrolase Msp_0516|Methanosphaera stadtmanae

Query: 2 HFPDALEM 9
HF DALE+
Sbjct: 54 HFGDALEI 61


>sp|PYRE_THEGJ|OROTATE phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 4 PDALEML 10
PDALE++
Sbjct: 44 PDALELM 50


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 PDALEML 10
P+ALEML
Sbjct: 182 PEALEML 188


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HFPDALEML 10
H PD LE++
Sbjct: 282 HAPDVLELI 290


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 FPDALEM 9
FPD +EM
Sbjct: 293 FPDVVEM 299


>sp|GCST_NATPD|PROBABLE aminomethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VHFPDALEML 10
+ PDALE+L
Sbjct: 151 LQGPDALELL 160


>sp|GLCDH_HALMA|GLUCOSE 1-dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 2 HFPDALEML 10
HF DA+E L
Sbjct: 305 HFEDAVETL 313


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 2 HFPDALEML 10
H PD LE++
Sbjct: 282 HAPDVLELV 290


>sp|SYC_ARCFU|CYSTEINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VHFPDALEML 10
+H PDA+ +L
Sbjct: 364 LHTPDAIAVL 373


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 2 HFPDALEML 10
H PD +EM+
Sbjct: 280 HAPDIMEMV 288


>sp|DPCKG_METS3|GTP-DEPENDENT dephospho-CoA kinase|Methanobrevibacter smithii (strain ATCC

Query: 2 HFPDALE 8
HF DA+E
Sbjct: 26 HFEDAIE 32




116|Sequence|576|585|ALEMLSLEGA

>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 1 ALEMLSLEG 9
+LE+L LEG
Sbjct: 146 SLELLELEG 154


>sp|RNP1_HALMA|RIBONUCLEASE P protein component 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 EMLSLEGA 10
+ML+LEGA
Sbjct: 41 QMLTLEGA 48




117|Sequence|581|590|SLEGAMDSVL

>sp|Y089_SULAC|MEMO1 family protein Saci_0089|Sulfolobus acidocaldarius (strain ATCC

Query: 1 SLEGAMDSVL 10
SLEG+ D+V+
Sbjct: 74 SLEGSPDTVI 83


>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 1 SLEGAMDSV 9
+LEGA DSV
Sbjct: 381 ALEGAGDSV 389


>sp|PGMI_AERPE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Aeropyrum pernix (strain

Query: 1 SLEGAMDSV 9
SLEGA++ V
Sbjct: 21 SLEGALEGV 29


>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SLEGAMDSVL 10
S GA+DSV+
Sbjct: 380 SFNGAVDSVV 389




118|Sequence|586|595|MDSVLHTLQM

>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MDSVLHTLQ 9
+DSVLH L+
Sbjct: 28 IDSVLHDLR 36


>sp|SUCC_DESA1|SUCCINATE--COA ligase [ADP-forming] subunit beta|Desulfurococcus amylolyticus

Query: 1 MDSVLH 6
MDS+LH
Sbjct: 265 MDSILH 270




119|Sequence|591|600|HTLQMYPDDQ

>sp|Y488_METKA|PROTEIN MK0488|Methanopyrus kandleri (strain AV19 /

Query: 2 TLQMYPDDQ 10
TL+ YPDD+
Sbjct: 49 TLKKYPDDE 57


>sp|RS17E_IGNH4|SMALL ribosomal subunit protein eS17|Ignicoccus hospitalis (strain

Query: 3 LQMYPD 8
LQMYPD
Sbjct: 17 LQMYPD 22


>sp|MTRC_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain

Query: 1 HTLQMYPDDQ 10
H +++P+DQ
Sbjct: 8 HAAELFPEDQ 17


>sp|MTRC_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain

Query: 1 HTLQMYPDDQ 10
H +++P+DQ
Sbjct: 8 HAAELFPEDQ 17


>sp|MTRC_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain

Query: 1 HTLQMYPDDQ 10
H +++P+DQ
Sbjct: 8 HAAELFPEDQ 17


>sp|MTRC_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanocaldococcus jannaschii

Query: 1 HTLQMYPDDQ 10
H ++YP++Q
Sbjct: 8 HAAELYPEEQ 17


>sp|RS17E_PYRNV|SMALL ribosomal subunit protein eS17|Pyrobaculum neutrophilum (strain

Query: 3 LQMYPD 8
L+MYPD
Sbjct: 17 LEMYPD 22


>sp|RS17E_PYRAE|SMALL ribosomal subunit protein eS17|Pyrobaculum aerophilum (strain

Query: 3 LQMYPD 8
L+MYPD
Sbjct: 17 LEMYPD 22


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 TLQMYPDDQ 10
T+ YPDD+
Sbjct: 56 TVNRYPDDR 64


>sp|RL18_METTP|LARGE ribosomal subunit protein uL18|Methanothrix thermoacetophila

Query: 1 HTLQMYPDD 9
H+ +++PDD
Sbjct: 132 HSPEVFPDD 140


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 HTLQMYPDD 9
T++ YPDD
Sbjct: 294 QTMRKYPDD 302


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 2 TLQMYPDD 9
TL+ YP+D
Sbjct: 364 TLEKYPED 371


>sp|Y1384_THEVO|PROTEIN TV1384|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TLQMYPDDQ 10
T+ YPD+Q
Sbjct: 51 TINTYPDNQ 59


>sp|Y1638_PYRFU|MEMO1 family protein PF1638|Pyrococcus furiosus (strain ATCC 43587

Query: 4 QMYPDD 9
Q YPDD
Sbjct: 10 QFYPDD 15


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 QMYPDD 9
+MYPDD
Sbjct: 449 KMYPDD 454


>sp|SECY_SULAC|PROTEIN translocase subunit SecY|Sulfolobus acidocaldarius (strain ATCC

Query: 2 TLQMYP 7
TL+MYP
Sbjct: 450 TLEMYP 455


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 1 HTLQMYPDDQ 10
H + MY D Q
Sbjct: 246 HKVSMYSDSQ 255


>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TLQMYPDD 9
TL++ PDD
Sbjct: 178 TLELVPDD 185


>sp|Y3503_METJA|UNCHARACTERIZED protein MJECL03|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LQMYPDDQ 10
+ +YPDD+
Sbjct: 85 IDVYPDDK 92




120|Sequence|596|605|YPDDQEIQCL

>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 YPDDQEIQ 8
YPDD EI+
Sbjct: 13 YPDDMEIR 20


>sp|SYH_THEVO|HISTIDINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YPDDQEIQ 8
YP+D EI+
Sbjct: 13 YPEDMEIE 20


>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PDDQEIQCL 10
PD+QE+Q L
Sbjct: 13 PDEQELQKL 21


>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 1 YPDDQE 6
YPDD E
Sbjct: 12 YPDDSE 17


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PDDQEIQCL 10
PDD E+Q L
Sbjct: 127 PDDDEMQAL 135


>sp|ASD_METBU|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanococcoides burtonii

Query: 2 PDDQEIQC 9
PDD +I C
Sbjct: 178 PDDFDIAC 185




121|Sequence|601|610|EIQCLGLSLI

>sp|METXA_HALSA|HOMOSERINE O-acetyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EIQCLGLSLI 10
+ QCLGL+ I
Sbjct: 167 DAQCLGLNAI 176




122|Sequence|606|615|GLSLIGYLIT

>sp|Y1204_ARCFU|UNCHARACTERIZED protein AF_1204|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLSLIGYLIT 10
G++L+GY+I+
Sbjct: 16 GIALVGYVIS 25


>sp|EHAA_METMP|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex membrane|Methanococcus

Query: 3 SLIGYLIT 10
+LIGYLIT
Sbjct: 49 ALIGYLIT 56


>sp|FDHD_SACS2|SULFUR carrier protein FdhD|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GLSLIGYL 8
GL+LIG+L
Sbjct: 235 GLTLIGFL 242


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 3 SLIGYLIT 10
SLIGYL T
Sbjct: 1170 SLIGYLNT 1177


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 3 SLIGYLIT 10
SLIGYL T
Sbjct: 1164 SLIGYLNT 1171


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 3 SLIGYLIT 10
SLIGYL T
Sbjct: 989 SLIGYLNT 996


>sp|ARLY_METMP|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LSLIGYLIT 10
L +IG+LIT
Sbjct: 126 LEIIGHLIT 134


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 2 LSLIGYLIT 10
L +IG+LIT
Sbjct: 126 LEIIGHLIT 134


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SLIGYLI 9
S+IGYLI
Sbjct: 118 SVIGYLI 124


>sp|SECE_THEON|PROTEIN translocase subunit SecE|Thermococcus onnurineus (strain NA1)

Query: 2 LSLIGYLIT 10
+ +IGYLIT
Sbjct: 51 IRMIGYLIT 59


>sp|Y611_METJA|PUTATIVE zinc metalloprotease MJ0611|Methanocaldococcus jannaschii (strain

Query: 1 GLSLIGYLI 9
GL LIGY++
Sbjct: 178 GLPLIGYML 186


>sp|AIPS_PYRHO|ARCHAETIDYLINOSITOL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LSLIGYLIT 10
L++IG+LIT
Sbjct: 30 LTIIGFLIT 38


>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GLSLIGYLI 9
G LIGYL+
Sbjct: 81 GDELIGYLV 89




123|Sequence|611|620|GYLITKKNVF

>sp|Y1056_PYRHO|PROBABLE S-adenosyl-L-methionine-binding protein PH1056|Pyrococcus

Query: 1 GYLITKKNVF 10
GY+ +KNVF
Sbjct: 12 GYIRKEKNVF 21


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GYLITKKNV 9
GY++ K+NV
Sbjct: 251 GYVVAKENV 259


>sp|Y887_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GYLITKKNV 9
G ITKKNV
Sbjct: 109 GEKITKKNV 117


>sp|Y4020_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GYLITKKNV 9
G ITKKNV
Sbjct: 108 GEKITKKNV 116


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GYLITKKNVF 10
GY++ KN F
Sbjct: 238 GYVVPPKNFF 247


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GYLITKKNV 9
GY++ KNV
Sbjct: 37 GYVVIPKNV 45


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 GYLITKKNV 9
GY++ KNV
Sbjct: 37 GYVVIPKNV 45


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 GYLITKKNV 9
GY++ KNV
Sbjct: 37 GYVVIPKNV 45


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 GYLITKKNV 9
GY++ KNV
Sbjct: 37 GYVVIPKNV 45


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYLITKKNV 9
GY++ KNV
Sbjct: 37 GYVVLPKNV 45


>sp|RNP4_THEVO|RIBONUCLEASE P protein component 4|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LITKKNVF 10
LITKK+V+
Sbjct: 9 LITKKDVY 16




124|Sequence|616|625|KKNVFIGTGH

>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 2 KNVFIGTG 9
KNVFIG+G
Sbjct: 400 KNVFIGSG 407


>sp|OTC_METST|ORNITHINE carbamoyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KKNVFIGTGH 10
KK VFIG G+
Sbjct: 146 KKIVFIGDGN 155


>sp|PUR5_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KNVFIGTGH 10
KN IG GH
Sbjct: 32 KNTIIGAGH 40


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KNVFIGTGH 10
+ VFI +GH
Sbjct: 70 EQVFIASGH 78


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KNVFIGTGH 10
+ VFI +GH
Sbjct: 72 EQVFIASGH 80


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KNVFIGTGH 10
+ VFI +GH
Sbjct: 72 EQVFIASGH 80


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KNVFIGTGH 10
+ VFI +GH
Sbjct: 72 EKVFIASGH 80


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KNVFIGTGH 10
+ VFI +GH
Sbjct: 72 EKVFIASGH 80


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 KNVFIGTGH 10
+ VFI +GH
Sbjct: 72 EEVFIASGH 80


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KNVFIGTGH 10
+ VFI +GH
Sbjct: 68 EEVFIASGH 76


>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 1 KKNVFIGTG 9
K N F+G+G
Sbjct: 149 KPNAFLGSG 157


>sp|RNZ_PYRNV|RIBONUCLEASE Z|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KNVFIGTG 9
K VF+GTG
Sbjct: 5 KLVFLGTG 12


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KNVFIGTG 9
K VF+GTG
Sbjct: 5 KLVFLGTG 12


>sp|RNZ_PYRCJ|RIBONUCLEASE Z|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KNVFIGTG 9
K VF+GTG
Sbjct: 5 KLVFLGTG 12


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KNVFIGTG 9
K VF+GTG
Sbjct: 5 KLVFLGTG 12


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 4 VFIGTG 9
+FIGTG
Sbjct: 243 IFIGTG 248


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KKNVFIGT 8
KKNVF+ T
Sbjct: 1009 KKNVFMRT 1016


>sp|DAPH_METKA|2,3,4,5-TETRAHYDROPYRIDINE-2,6-DICARBOXYLATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 KNVFIGTG 9
KNV IG G
Sbjct: 153 KNVHIGAG 160


>sp|Y575_METJA|UNCHARACTERIZED protein MJ0575|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKNVFIG 7
KKN FIG
Sbjct: 25 KKNKFIG 31




125|Sequence|621|630|IGTGHLLAKI

>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IGTGHLLA 8
+GT HLL
Sbjct: 230 VGTAHLLG 237


>sp|Y697_METVS|MEMO1 family protein Mevan_0697|Methanococcus vannielii (strain ATCC

Query: 1 IGTGHLLAKI 10
+G G+++AK+
Sbjct: 172 VGVGYMVAKV 181


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GTGHLLAKI 10
G G++LAKI
Sbjct: 377 GLGYILAKI 385




126|Sequence|626|635|LLAKILVSSL

***** No hits found ******


127|Sequence|631|640|LVSSLYRFKD

>sp|DTDA_PYRCJ|D-AMINOACYL-TRNA deacylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LVSSLYR 7
LVSSLYR
Sbjct: 98 LVSSLYR 104


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 SLYRFKD 10
S YRFKD
Sbjct: 449 STYRFKD 455


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 VSSLYRFKD 10
V L+RFKD
Sbjct: 23 VLGLFRFKD 31


>sp|COFE_ARCFU|COENZYME F420:L-glutamate ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LVSSLYRFKD 10
L+SS RF+D
Sbjct: 23 LISSRVRFED 32


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LVSSLYRFKD 10
+V LY FKD
Sbjct: 57 VVKQLYAFKD 66


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LVSSLYRFKD 10
+V LY FKD
Sbjct: 57 VVKQLYAFKD 66


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LVSSLYRFKD 10
+V LY FKD
Sbjct: 57 VVKQLYAFKD 66




128|Sequence|636|645|YRFKDVAEIQ

>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YRFKDVAEI 9
YR++DVAEI
Sbjct: 203 YRYRDVAEI 211


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YRFKDVAEI 9
YRFKDV +I
Sbjct: 204 YRFKDVVDI 212


>sp|Y207_METJA|UNCHARACTERIZED protein MJ0207|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YRFKDVAEIQ 10
Y FKD+ +I+
Sbjct: 61 YEFKDIKDIE 70


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YRFKDVAEI 9
YRF+DV +I
Sbjct: 204 YRFRDVVDI 212


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YRFKDVAEI 9
YRF+D+A +
Sbjct: 199 YRFRDLARV 207


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 1 YRFKDVAEI 9
YR+++VAE+
Sbjct: 202 YRYREVAEV 210


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YRFKDVAEI 9
YR+++VAE+
Sbjct: 202 YRYREVAEV 210


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 1 YRFKDVAEI 9
YR+++VAE+
Sbjct: 202 YRYREVAEV 210


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 1 YRFKDVAEI 9
YR+++VAE+
Sbjct: 202 YRYREVAEV 210


>sp|PGP_METMJ|PHOSPHOGLYCOLATE phosphatase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YRFKDVA 7
YRF DVA
Sbjct: 112 YRFADVA 118


>sp|GUAAB_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit B|Archaeoglobus fulgidus

Query: 1 YRFKDVAE 8
Y+FKDV E
Sbjct: 150 YKFKDVIE 157


>sp|DEOC_ACIB4|DEOXYRIBOSE-PHOSPHATE aldolase|Aciduliprofundum boonei (strain DSM 19572

Query: 1 YRFKDVAE 8
YR KD AE
Sbjct: 44 YRVKDAAE 51


>sp|IF2B_THEPD|TRANSLATION initiation factor 2 subunit|Thermofilum pendens (strain DSM 2475

Query: 1 YRFKDVAE 8
+ FKDVAE
Sbjct: 48 HNFKDVAE 55


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YRFKDVAEI 9
YR+ D+A++
Sbjct: 203 YRYADLADV 211


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 2 RFKDVAEIQ 10
+FK++ E+Q
Sbjct: 389 KFKEIIEVQ 397


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 2 RFKDVAEIQ 10
RFK +AE++
Sbjct: 256 RFKKIAELK 264


>sp|IF2B_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain

Query: 3 FKDVAE 8
FKDVAE
Sbjct: 44 FKDVAE 49


>sp|RL4_ARCFU|LARGE ribosomal subunit protein uL4|Archaeoglobus fulgidus (strain ATCC

Query: 2 RFKDVAEI 9
R KDVAE+
Sbjct: 150 RTKDVAEV 157




129|Sequence|641|650|VAEIQTKGFQ

>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AEIQTKGF 9
AEI+T+GF
Sbjct: 172 AEIKTEGF 179


>sp|CCA_SULTO|CCA-ADDING enzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AEIQTKGF 9
AEI+ KGF
Sbjct: 161 AEIKVKGF 168


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 VAEIQTKGF 9
++ +QTKGF
Sbjct: 35 LSALQTKGF 43


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 2 AEIQTKGF 9
AE++ KGF
Sbjct: 175 AEVRVKGF 182


>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 AEIQTKGF 9
AEI+ KGF
Sbjct: 161 AEIKVKGF 168


>sp|TRPD_THEKO|ANTHRANILATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 VAEIQTKGF 9
+A +QTKG+
Sbjct: 37 LAALQTKGY 45


>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VAEIQTKGF 9
+A +QTKG+
Sbjct: 35 LAALQTKGY 43




130|Sequence|646|655|TKGFQTILAI

***** No hits found ******


131|Sequence|651|660|TILAILKLSA

***** No hits found ******


132|Sequence|656|665|LKLSASFSKL

>sp|BIOD_METVS|ATP-DEPENDENT dethiobiotin synthetase BioD|Methanococcus vannielii (strain ATCC

Query: 1 LKLSASFSKL 10
LK+ A+F KL
Sbjct: 86 LKIKAAFEKL 95




133|Sequence|661|670|SFSKLLVHHS

>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 2 FSKLLVHH 9
KLLVHH
Sbjct: 503 LEKLLVHH 510


>sp|CETZ_METTP|TUBULIN-LIKE protein CetZ|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SFSKLLVH 8
SFS L++H
Sbjct: 119 SFSPLMIH 126




134|Sequence|666|675|LVHHSFDLVI

>sp|TRPCD_ARCFU|TRYPTOPHAN biosynthesis protein TrpCD|Archaeoglobus fulgidus (strain ATCC

Query: 2 VHHSFDLV 9
VHH+ DLV
Sbjct: 134 VHHAEDLV 141


>sp|PSB_NATMM|PROTEASOME subunit beta|Natrialba magadii (strain ATCC 43099

Query: 3 HHSFDLVI 10
HH FD V+
Sbjct: 236 HHDFDEVV 243


>sp|PSB1_HALTV|PROTEASOME subunit beta 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 3 HHSFDLVI 10
HH FD V+
Sbjct: 236 HHDFDEVL 243


>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 VHHSFDLVI 10
VH +FD +I
Sbjct: 217 VHENFDKII 225


>sp|MBD_THEVO|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma volcanium (strain ATCC

Query: 1 LVHHSFDL 8
L+ H+FD+
Sbjct: 257 LIEHNFDI 264


>sp|DTDA_THEAC|D-AMINOACYL-TRNA deacylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LVHHSFDLVI 10
L H FDLVI
Sbjct: 33 LNHGDFDLVI 42




135|Sequence|671|680|FDLVIFHQMS

>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 233 FDFAVFHQ 240


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FDLVIFHQ 8
FD IFHQ
Sbjct: 241 FDYAIFHQ 248


>sp|HMGCS_THEVO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FDLVIFHQ 8
+D V+FHQ
Sbjct: 228 YDYVVFHQ 235


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FDLVIFHQ 8
+D V+FHQ
Sbjct: 228 YDYVVFHQ 235


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 FDLVIFHQ 8
+D V+FHQ
Sbjct: 228 YDYVVFHQ 235


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 233 FDYAVFHQ 240


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 233 FDYAVFHQ 240


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 233 FDYAVFHQ 240


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 233 FDYAVFHQ 240


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 233 FDYAVFHQ 240


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 233 FDYAVFHQ 240


>sp|HMGCS_METTH|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 228 FDYAVFHQ 235


>sp|HMGCS_METKA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 233 FDYAVFHQ 240


>sp|HMGCS_CALMQ|HYDROXYMETHYLGLUTARYL-COA synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 229 FDYAVFHQ 236


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 229 FDYFVFHQ 236


>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 229 FDYFVFHQ 236


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 231 FDYFVFHQ 238


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 231 FDYFVFHQ 238


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 231 FDYFVFHQ 238


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 231 FDYFVFHQ 238


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 231 FDYFVFHQ 238


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 231 FDYFVFHQ 238


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 231 FDYFVFHQ 238


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 FDLVIFHQ 8
FD +FHQ
Sbjct: 229 FDYFVFHQ 236


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FDLVIFHQ 8
F V+FHQ
Sbjct: 230 FTYVVFHQ 237


>sp|LEUC_SULAC|3-ISOPROPYLMALATE dehydratase large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 DLVIFHQMS 10
DLV FH ++
Sbjct: 29 DLVAFHDLT 37


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 DLVIFHQMS 10
DLV FH ++
Sbjct: 31 DLVAFHDLT 39




136|Sequence|676|685|FHQMSSNIME

>sp|COBS_SACI7|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FHQMSSNIM 9
FH +SSN++
Sbjct: 136 FHLISSNVL 144


>sp|COBS_SACI2|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FHQMSSNIM 9
FH +SSN++
Sbjct: 136 FHLISSNVL 144


>sp|COBS_SACI1|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FHQMSSNIM 9
FH +SSN++
Sbjct: 136 FHLISSNVL 144




137|Sequence|681|690|SNIMEQKDQQ

***** No hits found ******


138|Sequence|686|695|QKDQQFLNLC

>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 1 QKDQQFL 7
Q+DQQF+
Sbjct: 176 QRDQQFV 182


>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 DQQFLNLC 10
D++FL++C
Sbjct: 385 DEEFLSMC 392


>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KDQQFLNLC 10
KD++F N C
Sbjct: 272 KDKEFFNGC 280


>sp|Y816_METJA|UNCHARACTERIZED protein MJ0816|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QKDQQFLNLC 10
+KD+ +LN C
Sbjct: 245 KKDENYLNYC 254


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KDQQFLN 8
KDQ FLN
Sbjct: 516 KDQWFLN 522


>sp|HEM1_METTM|GLUTAMYL-TRNA reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 QKDQQFLNLC 10
+ D++FL +C
Sbjct: 380 RDDREFLRMC 389


>sp|UPPP_METM7|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C7 /

Query: 1 QKDQQFLNL 9
+KD++++NL
Sbjct: 68 KKDKEYINL 76


>sp|UPPP_METM6|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C6 /

Query: 1 QKDQQFLNL 9
+KD++++NL
Sbjct: 68 KKDKEYINL 76




139|Sequence|691|700|FLNLCCKCFA

>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 FLNLCCKC 8
F ++CC C
Sbjct: 72 FCDMCCLC 79


>sp|NNR_METJA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanocaldococcus jannaschii

Query: 1 FLNLCCKCF 9
FL+ CC F
Sbjct: 449 FLSACCGAF 457


>sp|TRMY_HALLT|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halorubrum

Query: 2 LNLCCKCFA 10
L+L C+C A
Sbjct: 29 LDLLCRCVA 37


>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FLNLCCKCF 9
FL++C K F
Sbjct: 388 FLSMCAKLF 396


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 2 LNLCCKCFA 10
LN C KC++
Sbjct: 292 LNKCIKCYS 300


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 3 NLCCKCFA 10
NLC +C+
Sbjct: 12 NLCNRCYG 19


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 2 LNLCCKCFA 10
+NLC +C+
Sbjct: 1 MNLCRECYG 9


>sp|RS14Z_METST|SMALL ribosomal subunit protein uS14|Methanosphaera stadtmanae (strain

Query: 2 LNLCCKCF 9
LNLC +CF
Sbjct: 27 LNLCRQCF 34


>sp|RS14Z_METMP|SMALL ribosomal subunit protein uS14|Methanococcus maripaludis (strain

Query: 2 LNLCCKCF 9
LNLC +CF
Sbjct: 33 LNLCRQCF 40


>sp|RS14Z_METJA|SMALL ribosomal subunit protein uS14|Methanocaldococcus jannaschii

Query: 2 LNLCCKCF 9
LNLC +CF
Sbjct: 33 LNLCRQCF 40




140|Sequence|696|705|CKCFAKVAMD

>sp|DAPF_METAR|DIAMINOPIMELATE epimerase|Methanocella arvoryzae (strain DSM 22066

Query: 2 KCFAKVAMD 10
+CF K A+D
Sbjct: 81 RCFVKYAVD 89




141|Sequence|701|710|KVAMDDYLKN

>sp|Y1254_IGNH4|UPF0173 metal-dependent hydrolase Igni_1254|Ignicoccus hospitalis (strain

Query: 1 KVAMDDYLKN 10
K ++DYLKN
Sbjct: 35 KTTLEDYLKN 44


>sp|GLMM_PYRFU|PROBABLE phosphoglucosamine mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AMDDYLK 9
A+DDYLK
Sbjct: 280 ALDDYLK 286


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KVAMDDYLKN 10
+V MDD+L N
Sbjct: 373 EVVMDDWLSN 382


>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 3 AMDDYLK 9
A+DDY+K
Sbjct: 280 ALDDYIK 286


>sp|GLMM_THEKO|PROBABLE phosphoglucosamine mutase|Thermococcus kodakarensis (strain ATCC

Query: 3 AMDDYLK 9
A+DDYL+
Sbjct: 280 ALDDYLR 286


>sp|Y698_ARCFU|UNCHARACTERIZED protein AF_0698|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AMDDYLKN 10
A+DDYL N
Sbjct: 52 ALDDYLMN 59


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 2 VAMDDYL 8
+AMDD+L
Sbjct: 326 IAMDDFL 332


>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 VAMDDYLKN 10
+A+DD LKN
Sbjct: 11 LALDDLLKN 19


>sp|UPP_HALWD|URACIL phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VAMDDYLKN 10
VA+DDYL +
Sbjct: 199 VAIDDYLDD 207


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVAMDDYLKN 10
++ + DYLKN
Sbjct: 212 EIELADYLKN 221


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 VAMDDYLKN 10
VA+DD+L N
Sbjct: 282 VAVDDHLMN 290


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVAMDDYLKN 10
+V MDD +KN
Sbjct: 363 EVTMDDLIKN 372


>sp|RS3_META3|SMALL ribosomal subunit protein uS3|Methanococcus aeolicus (strain ATCC

Query: 4 MDDYLKN 10
+D+YLKN
Sbjct: 16 VDEYLKN 22


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 2 VAMDDYLK 9
V MDD+LK
Sbjct: 408 VTMDDFLK 415


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 VAMDDYLKN 10
V +DD+L+N
Sbjct: 745 VLIDDFLQN 753


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AMDDYLKN 10
A D+YLKN
Sbjct: 280 ANDEYLKN 287


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 4 MDDYLKN 10
+D+YLKN
Sbjct: 19 LDEYLKN 25


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 KVAMDDYLK 9
K MDDYL+
Sbjct: 118 KEQMDDYLQ 126


>sp|ARGDC_CALMQ|ARGININE decarboxylase proenzyme|Caldivirga maquilingensis (strain ATCC

Query: 5 DDYLKN 10
D+YLKN
Sbjct: 39 DEYLKN 44


>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 VAMDDYLKN 10
V +DD+L+N
Sbjct: 377 VVIDDWLEN 385




142|Sequence|706|715|DYLKNVMLER

>sp|RTCA_METBU|RNA 3'-terminal phosphate cyclase|Methanococcoides burtonii (strain DSM

Query: 1 DYLKNVML 8
DYLKNV L
Sbjct: 130 DYLKNVTL 137


>sp|RTCA_THEGJ|RNA 3'-terminal phosphate cyclase|Thermococcus gammatolerans (strain

Query: 1 DYLKNVML 8
DYL+NV L
Sbjct: 130 DYLRNVTL 137


>sp|NFI_DESA1|ENDONUCLEASE V|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 DYLKNVMLER 10
DY + VML+R
Sbjct: 4 DYQRAVMLQR 13


>sp|RTCA_METJA|RNA 3'-terminal phosphate cyclase|Methanocaldococcus jannaschii (strain

Query: 1 DYLKNVMLE 9
DY+KNV L+
Sbjct: 132 DYVKNVTLK 140


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DYLKNVML 8
DYL+NV L
Sbjct: 127 DYLQNVTL 134


>sp|RTCA_ARCFU|RNA 3'-terminal phosphate cyclase|Archaeoglobus fulgidus (strain ATCC

Query: 1 DYLKNVML 8
DY KNV L
Sbjct: 130 DYFKNVTL 137


>sp|PYRF_SACS2|OROTIDINE 5'-phosphate decarboxylase|Saccharolobus solfataricus (strain ATCC

Query: 1 DYLKNVMLE 9
DY+KNV+ E
Sbjct: 125 DYIKNVIRE 133


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DYLKNVML 8
DYLKN+ L
Sbjct: 24 DYLKNLFL 31


>sp|ENO_METJA|ENOLASE jannaschii (strain ATCC 43067

Query: 3 LKNVMLER 10
LKNV+LE+
Sbjct: 191 LKNVILEK 198


>sp|ARGDC_STAMF|ARGININE decarboxylase proenzyme|Staphylothermus marinus (strain ATCC

Query: 1 DYLKNVMLE 9
+YL+NV++E
Sbjct: 31 EYLRNVVVE 39




143|Sequence|711|720|VMLERACDQN

>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VMLERACDQN 10
VM+ RA D N
Sbjct: 163 VMIRRAADPN 172


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 VMLERACDQN 10
VM+ RA D N
Sbjct: 163 VMIRRAADPN 172


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VMLERACDQN 10
VM+ RA D N
Sbjct: 163 VMIRRAADPN 172


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 1 VMLERACDQN 10
VM+ RA D N
Sbjct: 163 VMIRRAADPN 172


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VMLERACDQN 10
VM+ RA D N
Sbjct: 163 VMIRRAADPN 172


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VMLERACDQN 10
VM+ RA D N
Sbjct: 163 VMIRRAADPN 172


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 VMLERACDQN 10
VM+ RA D N
Sbjct: 163 VMIRRAADPN 172


>sp|RL39_METMJ|LARGE ribosomal subunit protein eL39|Methanoculleus marisnigri (strain

Query: 1 VMLERACDQN 10
+ L +AC+QN
Sbjct: 10 IRLAKACEQN 19




144|Sequence|716|725|ACDQNNSIMV

>sp|RS2_ARCFU|SMALL ribosomal subunit protein uS2|Archaeoglobus fulgidus (strain ATCC

Query: 2 CDQNNS 7
CD NNS
Sbjct: 144 CDSNNS 149


>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DQNNSIM 9
D+NNSI+
Sbjct: 193 DENNSIL 199


>sp|METXA_METVS|HOMOSERINE O-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 3 DQNNSIMV 10
D+NN+I+V
Sbjct: 44 DKNNAILV 51




145|Sequence|721|730|NSIMVECLLL

***** No hits found ******


146|Sequence|726|735|ECLLLLGADA

>sp|TRPF_METTP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ECLLLLGADA 10
EC L GADA
Sbjct: 16 ECALKAGADA 25


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 ECLLLLGAD 9
ECL+ LGA+
Sbjct: 35 ECLVELGAE 43


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 ECLLLLGAD 9
EC+ LG+D
Sbjct: 161 ECIASLGSD 169




147|Sequence|731|740|LGADANQAKE

>sp|DAPA_METMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ADANQAK 9
+DANQAK
Sbjct: 273 SDANQAK 279


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 3 ADANQAKE 10
ADA QA+E
Sbjct: 458 ADARQARE 465




148|Sequence|736|745|NQAKEGSSLI

>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NQAKEGSSLI 10
NQAKEG I
Sbjct: 150 NQAKEGVDFI 159


>sp|WTPB_ARCFU|MOLYBDATE/TUNGSTATE transport system permease protein|Archaeoglobus fulgidus (strain

Query: 1 NQAKEG 6
NQAKEG
Sbjct: 145 NQAKEG 150




149|Sequence|741|750|GSSLICQVCE

>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 ICQVCE 10
ICQVC+
Sbjct: 23 ICQVCQ 28


>sp|TFE_METHJ|TRANSCRIPTION factor E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SSLICQVCE 10
S +CQ CE
Sbjct: 136 SQFVCQECE 144


>sp|DAPB_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GSSLICQVCE 10
GSS+I +CE
Sbjct: 14 GSSIIKTLCE 23


>sp|YBP3_ACIAM|UNCHARACTERIZED 17.7 kDa protein in|Acidianus ambivalens (Desulfurolobus

Query: 1 GSSLICQVC 9
G+ +IC VC
Sbjct: 139 GTGVICPVC 147


>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 GSSLICQVC 9
GSS++ VC
Sbjct: 111 GSSIVSAVC 119


>sp|FDHD_THEVO|SULFUR carrier protein FdhD|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SSLICQVCE 10
SSL +VCE
Sbjct: 245 SSLAIEVCE 253




150|Sequence|746|755|CQVCEKESSP

>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 2 QVCEKESSP 10
Q+C+KE +P
Sbjct: 282 QICDKEGTP 290


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 CQVCEKE 7
C VC+KE
Sbjct: 1033 CDVCKKE 1039


>sp|RF1_THEAC|PEPTIDE chain release factor subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 VCEKESSP 10
VCEK+ +P
Sbjct: 351 VCEKDGTP 358


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CQVCEKESS 9
C VC KE S
Sbjct: 8 CPVCNKEFS 16


>sp|RL2_METAR|LARGE ribosomal subunit protein uL2|Methanocella arvoryzae (strain DSM

Query: 1 CQVCEKESSP 10
C +C ES P
Sbjct: 104 CAICNIESQP 113


>sp|RL2_HALMA|LARGE ribosomal subunit protein uL2|Haloarcula marismortui (strain ATCC

Query: 3 VCEKESSP 10
VC ESSP
Sbjct: 106 VCNVESSP 113


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 2 QVCEKESSP 10
++ EKE SP
Sbjct: 273 EIAEKEGSP 281


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 1 CQVCEKE 7
C+VCE++
Sbjct: 27 CRVCERQ 33


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 CQVCEKESS 9
C VC +ES+
Sbjct: 461 CLVCGREST 469


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 CQVCEKES 8
C +C KE+
Sbjct: 461 CPICSKET 468


>sp|THII_ARCFU|PROBABLE tRNA sulfurtransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QVCEKES 8
++CEKE+
Sbjct: 141 EICEKEA 147




151|Sequence|751|760|KESSPKLVEL

>sp|HTPX_METTH|PROTEASE HtpX homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 SPKLVEL 10
SPK+VEL
Sbjct: 64 SPKIVEL 70


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KESSPKLVE 9
KE+ PK++E
Sbjct: 375 KEADPKIIE 383


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 KESSPKLVEL 10
KE++P ++EL
Sbjct: 826 KENTPYIIEL 835




152|Sequence|756|765|KLVELLLNSG

>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KLVELLLNS 9
KLV+++LNS
Sbjct: 198 KLVDIILNS 206


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 KLVELLLNSG 10
KLVE+L N G
Sbjct: 865 KLVEILQNMG 874


>sp|Y1118_ARCFU|UNCHARACTERIZED protein AF_1118|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLVELLLNSG 10
K VE+L NSG
Sbjct: 47 KFVEILDNSG 56


>sp|Y045_METMA|PUTATIVE ankyrin repeat protein MM_0045|Methanosarcina mazei (strain ATCC

Query: 2 LVELLLNSG 10
+VELL+N+G
Sbjct: 248 IVELLVNAG 256


>sp|MDH_METST|MALATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KLVELLLNSG 10
KLVE L NSG
Sbjct: 209 KLVETLKNSG 218


>sp|TRPA_PYRAB|TRYPTOPHAN synthase alpha chain|Pyrococcus abyssi (strain GE5 /

Query: 3 VELLLNSG 10
VE+LLN+G
Sbjct: 206 VEMLLNAG 213


>sp|Y694_ARCFU|UNCHARACTERIZED protein AF_0694|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLVELLLNS 9
+L+E+LLN+
Sbjct: 86 QLIEILLNA 94


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 KLVELLLNSG 10
KL+E+ L+SG
Sbjct: 227 KLIEIKLSSG 236


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 KLVELLLNSG 10
+L+E+L+N G
Sbjct: 273 RLLEILVNMG 282


>sp|HISX_PYRFU|HISTIDINOL dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLVELLLNSG 10
KLV+L+ N+G
Sbjct: 285 KLVDLIENAG 294




153|Sequence|761|770|LLNSGSREQD

>sp|Y1334_THEKO|UPF0200 protein TK1334|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LLNSGSREQ 9
L+N+GSRE+
Sbjct: 161 LVNNGSREE 169


>sp|GGGPS_THEAC|GERANYLGERANYLGLYCERYL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LLNSGSRE 8
LLNSGS E
Sbjct: 97 LLNSGSLE 104


>sp|Y868_THEGJ|UPF0200 protein TGAM_0868|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LLNSGSREQ 9
L+N GS+E+
Sbjct: 161 LINDGSKEE 169




154|Sequence|766|775|SREQDVRKAL

>sp|TPIS_THEVO|TRIOSEPHOSPHATE isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 QDVRKAL 10
QDVRK+L
Sbjct: 179 QDVRKSL 185


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 2 REQDVRKAL 10
RE+ +RKAL
Sbjct: 149 REEYIRKAL 157


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 2 REQDVRKA 9
+E+DV+KA
Sbjct: 363 KEEDVKKA 370


>sp|HEM1_METTP|GLUTAMYL-TRNA reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 REQDVRKAL 10
+EQ+VR+A+
Sbjct: 346 KEQEVRRAM 354


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 2 REQDVRKAL 10
RE D+RKA+
Sbjct: 206 RESDLRKAI 214


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 3 EQDVRKAL 10
E++VRKAL
Sbjct: 300 EKEVRKAL 307




155|Sequence|771|780|VRKALTISIG

>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VRKALTISIG 10
VRK LT+S G
Sbjct: 365 VRKPLTVSYG 374


>sp|GVPH2_HALSA|GAS vesicle protein H2|Halobacterium salinarum (strain ATCC 700922

Query: 4 ALTISIG 10
ALTIS+G
Sbjct: 117 ALTISVG 123




156|Sequence|776|785|TISIGKGDSQ

>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ISIGKGDSQ 10
+SIG+GDS+
Sbjct: 145 VSIGRGDSR 153


>sp|MTRA2_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter

Query: 4 IGKGDSQ 10
IGKGDS+
Sbjct: 174 IGKGDSE 180


>sp|RRP41_ARCFU|EXOSOME complex component Rrp41|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TISIGKGDSQ 10
++++GK D Q
Sbjct: 161 SVAVGKADGQ 170


>sp|RL5_PYRHO|LARGE ribosomal subunit protein uL5|Pyrococcus horikoshii (strain ATCC

Query: 1 TISIGKGDS 9
TI+IG G+S
Sbjct: 29 TINIGVGES 37


>sp|RL5_PYRAB|LARGE ribosomal subunit protein uL5|Pyrococcus abyssi (strain GE5 /

Query: 1 TISIGKGDS 9
TI+IG G+S
Sbjct: 29 TINIGVGES 37


>sp|RL5_THEKO|LARGE ribosomal subunit protein uL5|Thermococcus kodakarensis (strain

Query: 1 TISIGKGDS 9
TI+IG G+S
Sbjct: 26 TINIGVGES 34


>sp|RL5_PYRFU|LARGE ribosomal subunit protein uL5|Pyrococcus furiosus (strain ATCC

Query: 1 TISIGKGDS 9
TI+IG G+S
Sbjct: 29 TINIGVGES 37


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ISIGKGDS 9
+ +GKGDS
Sbjct: 552 VLLGKGDS 559


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ISIGKGDS 9
+ +GKGDS
Sbjct: 552 VLLGKGDS 559




157|Sequence|781|790|KGDSQIISLL

>sp|SPSS2_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanoregula boonei (strain DSM 21154

Query: 1 KGDSQIISLL 10
KGDS I+S L
Sbjct: 160 KGDSVIVSAL 169


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 KGDSQIISLL 10
KGDS I+S L
Sbjct: 168 KGDSVIVSAL 177


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 KGDSQIIS 8
+GDS IIS
Sbjct: 93 RGDSDIIS 100


>sp|RNH_SULTO|RIBONUCLEASE HI|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KGDSQII 7
KGDSQ++
Sbjct: 74 KGDSQLV 80


>sp|AROA_NATPD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KGDSQIISLL 10
+GD+ I+S+L
Sbjct: 276 QGDAAIVSIL 285




158|Sequence|786|795|IISLLLRRLA

>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IISLLLRR 8
+ISLLL+R
Sbjct: 316 VISLLLKR 323


>sp|Y873_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 ISLLLRRLA 10
++LLLR+LA
Sbjct: 176 LTLLLRKLA 184




159|Sequence|791|800|LRRLALDVAN

>sp|RS3_METAC|SMALL ribosomal subunit protein uS3|Methanosarcina acetivorans (strain

Query: 1 LRRLALDVAN 10
+R+L DVAN
Sbjct: 62 IRKLTRDVAN 71


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RRLALDVAN 10
RR+ +D+AN
Sbjct: 191 RRIMIDLAN 199


>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 1 LRRLALDVAN 10
+RRL +DV N
Sbjct: 133 VRRLPVDVLN 142




160|Sequence|796|805|LDVANNSICL

***** No hits found ******


161|Sequence|801|810|NSICLGGFCI

>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 4 CLGGFC 9
C GGFC
Sbjct: 471 CQGGFC 476


>sp|DNAG_METMA|DNA primase DnaG|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NSICLGG 7
N+IC+GG
Sbjct: 192 NTICVGG 198


>sp|DNAG_METBU|DNA primase DnaG|Methanococcoides burtonii (strain DSM 6242

Query: 1 NSICLGG 7
N+IC+GG
Sbjct: 192 NTICVGG 198


>sp|DNAG_METBF|DNA primase DnaG|Methanosarcina barkeri (strain Fusaro /

Query: 1 NSICLGG 7
N+IC+GG
Sbjct: 192 NTICVGG 198


>sp|DNAG_METAC|DNA primase DnaG|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NSICLGG 7
N+IC+GG
Sbjct: 192 NTICVGG 198


>sp|PYRF_AERPE|OROTIDINE 5'-phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 NSICLGG 7
++ICLGG
Sbjct: 193 DAICLGG 199


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 NSICLGGFCI 10
N +C+ GF +
Sbjct: 629 NGVCMHGFTL 638


>sp|Y2332_ARCFU|UNCHARACTERIZED protein AF_2332|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ICLGGF 8
IC GGF
Sbjct: 94 ICYGGF 99


>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 2 SICLGGFCI 10
++ LGG CI
Sbjct: 253 AVILGGTCI 261


>sp|Y085_ARCFU|UNCHARACTERIZED protein AF_0085|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CLGGFC 9
CL GFC
Sbjct: 40 CLAGFC 45


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 SICLGGFCI 10
S+C+ GF +
Sbjct: 577 SVCMHGFAL 585




162|Sequence|806|815|GGFCIGKVEP

>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 1 GGFCIGKVEP 10
GGF IGKV P
Sbjct: 161 GGFVIGKVYP 170


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 4 CIGKVEP 10
CIG++EP
Sbjct: 342 CIGRIEP 348


>sp|RTCA_THEON|RNA 3'-terminal phosphate cyclase|Thermococcus onnurineus (strain NA1)

Query: 1 GGFCIGKVEP 10
GG +G+VEP
Sbjct: 161 GGLVVGRVEP 170


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GGFCIG 6
GGFC+G
Sbjct: 292 GGFCVG 297


>sp|COFH_METM6|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C6

Query: 2 GFCIGKVEP 10
GFC K EP
Sbjct: 64 GFCAFKAEP 72


>sp|RTCA_THEKO|RNA 3'-terminal phosphate cyclase|Thermococcus kodakarensis (strain

Query: 1 GGFCIGKVEP 10
GG +G++EP
Sbjct: 161 GGLVVGRIEP 170


>sp|RL24E_METVS|LARGE ribosomal subunit protein eL24|Methanococcus vannielii (strain

Query: 3 FCIGKVEP 10
FC GK+EP
Sbjct: 8 FCEGKIEP 15


>sp|COFC_METHJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GFCIGKVEP 10
GFC G EP
Sbjct: 84 GFCEGNDEP 92


>sp|NADM_METJA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GFCIGKVEP 10
GF IG+ +P
Sbjct: 3 GFIIGRFQP 11


>sp|Y790_THEKO|UPF0179 protein TK0790|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GGFCIGKVEP 10
G C+G +EP
Sbjct: 33 AGVCVGNLEP 42


>sp|Y1048_THEON|UPF0179 protein TON_1048|Thermococcus onnurineus (strain NA1)

Query: 1 GGFCIGKVEP 10
G C+G +EP
Sbjct: 38 AGVCVGNLEP 47


>sp|BRIX_SULTO|PROBABLE Brix domain-containing ribosomal biogenesis|Sulfurisphaera tokodaii

Query: 4 CIGKVE 9
CIGK+E
Sbjct: 108 CIGKIE 113


>sp|HIS7_METJA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FCIGKVEP 10
+C+G EP
Sbjct: 117 YCVGNYEP 124


>sp|SYFA_METHJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GFCIGKV 8
FCIG+V
Sbjct: 335 AFCIGRV 341


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 CIGKVEP 10
CIG V+P
Sbjct: 534 CIGAVKP 540


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GFCIGKV 8
FCIG+V
Sbjct: 339 AFCIGRV 345


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GGFCIGKVE 9
GG CI +E
Sbjct: 141 GGLCIEHIE 149


>sp|RTCA_THEGJ|RNA 3'-terminal phosphate cyclase|Thermococcus gammatolerans (strain

Query: 1 GGFCIGKVEP 10
GG G VEP
Sbjct: 161 GGLVTGSVEP 170


>sp|RS11_SACS2|SMALL ribosomal subunit protein uS11|Saccharolobus solfataricus (strain

Query: 1 GGFCIGKVE 9
GF IG++E
Sbjct: 103 AGFIIGRIE 111


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GFCIGKVEP 10
G CIG V P
Sbjct: 469 GPCIGHVSP 477


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 GGFCIGKV 8
GGFC G V
Sbjct: 102 GGFCGGLV 109


>sp|RS11_HYPBU|SMALL ribosomal subunit protein uS11|Hyperthermus butylicus (strain DSM

Query: 1 GGFCIGKVE 9
GF IG++E
Sbjct: 104 AGFIIGRIE 112


>sp|ILVC_METS5|KETOL-ACID reductoisomerase (NAD(P)(+))|Metallosphaera sedula (strain ATCC

Query: 1 GGFCIGK 7
GGF +GK
Sbjct: 261 GGFTVGK 267


>sp|RS11_SULTO|SMALL ribosomal subunit protein uS11|Sulfurisphaera tokodaii (strain DSM

Query: 1 GGFCIGKVE 9
GF IG++E
Sbjct: 103 AGFIIGRIE 111


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GFCIGKVEP 10
G CIG V P
Sbjct: 475 GPCIGHVSP 483


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GFCIGKVEP 10
G CIG V P
Sbjct: 475 GPCIGHVSP 483


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GFCIGKVEP 10
G CIG V P
Sbjct: 475 GPCIGHVSP 483


>sp|RS11_AERPE|SMALL ribosomal subunit protein uS11|Aeropyrum pernix (strain ATCC 700893

Query: 1 GGFCIGKVE 9
GF IG++E
Sbjct: 104 AGFIIGRIE 112


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GFCIGKVEP 10
G CIG V P
Sbjct: 469 GPCIGHVSP 477


>sp|RS11_STAMF|SMALL ribosomal subunit protein uS11|Staphylothermus marinus (strain ATCC

Query: 1 GGFCIGKVE 9
GF IG++E
Sbjct: 104 AGFIIGRIE 112


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 3 FCIGKVEP 10
FC K EP
Sbjct: 128 FCCDKTEP 135


>sp|RL24E_METMP|LARGE ribosomal subunit protein eL24|Methanococcus maripaludis (strain

Query: 2 GFCIGKVEP 10
FC G +EP
Sbjct: 7 SFCEGTIEP 15


>sp|RL24E_METM6|LARGE ribosomal subunit protein eL24|Methanococcus maripaludis (strain

Query: 2 GFCIGKVEP 10
FC G +EP
Sbjct: 7 SFCEGTIEP 15


>sp|RL24E_METM5|LARGE ribosomal subunit protein eL24|Methanococcus maripaludis (strain

Query: 2 GFCIGKVEP 10
FC G +EP
Sbjct: 7 SFCEGTIEP 15


>sp|MVHD_METTH|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 4 CIGKVEP 10
C G++EP
Sbjct: 42 CSGRIEP 48


>sp|RS11_SULAC|SMALL ribosomal subunit protein uS11|Sulfolobus acidocaldarius (strain

Query: 1 GGFCIGKVE 9
GF IG++E
Sbjct: 103 AGFIIGRIE 111


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 4 CIGKVEP 10
CIG +EP
Sbjct: 175 CIGLLEP 181


>sp|MVHD_METTM|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 4 CIGKVEP 10
C G++EP
Sbjct: 42 CSGRIEP 48


>sp|RL24E_METM7|LARGE ribosomal subunit protein eL24|Methanococcus maripaludis (strain

Query: 2 GFCIGKVEP 10
FC G +EP
Sbjct: 7 SFCEGTIEP 15


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GFCIGKVEP 10
G C+G V P
Sbjct: 471 GPCVGHVSP 479


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GFCIGKVEP 10
G CIG V P
Sbjct: 471 GPCIGHVSP 479


>sp|RRP41_AERPE|EXOSOME complex component Rrp41|Aeropyrum pernix (strain ATCC 700893

Query: 1 GGFCIGKVE 9
GG +GK++
Sbjct: 160 GGVAVGKIQ 168




163|Sequence|811|820|GKVEPSWLGP

>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 1 GKVEPSWLGP 10
G P WLGP
Sbjct: 271 GAYGPMWLGP 280


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 5 PSWLGP 10
P WLGP
Sbjct: 278 PVWLGP 283


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 5 PSWLGP 10
P WLGP
Sbjct: 275 PVWLGP 280


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 5 PSWLGP 10
P WLGP
Sbjct: 266 PVWLGP 271


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 1 GKVEPSWL 8
G++EP+WL
Sbjct: 31 GRLEPAWL 38


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 5 PSWLGP 10
P WLGP
Sbjct: 274 PLWLGP 279


>sp|TRM1_HALSA|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 5 PSWLGP 10
P WLGP
Sbjct: 271 PLWLGP 276


>sp|TRM1_HALS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 5 PSWLGP 10
P WLGP
Sbjct: 271 PLWLGP 276


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 GKVEPSW 7
GKV+PSW
Sbjct: 580 GKVDPSW 586


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 4 EPSWLGP 10
+ SWLGP
Sbjct: 94 DASWLGP 100


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 1 GKVEPSWLGP 10
G P WLGP
Sbjct: 270 GASGPLWLGP 279


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 3 VEPSWLGP 10
V P W+GP
Sbjct: 267 VGPLWMGP 274


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus (strain

Query: 5 PSWLGP 10
P WLGP
Sbjct: 277 PLWLGP 282


>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 5 PSWLGP 10
P WLGP
Sbjct: 270 PLWLGP 275


>sp|TRM1_PYRNV|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum neutrophilum

Query: 5 PSWLGP 10
P WLGP
Sbjct: 259 PLWLGP 264


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 5 PSWLGP 10
P WLGP
Sbjct: 283 PLWLGP 288


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 5 PSWLGP 10
P+WL P
Sbjct: 492 PTWLAP 497


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 5 PSWLGP 10
P WLGP
Sbjct: 283 PLWLGP 288


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 5 PSWLGP 10
P WLGP
Sbjct: 283 PLWLGP 288


>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GKVEPSW 7
GK+ P W
Sbjct: 203 GKIRPGW 209


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 PSWLGP 10
P+WL P
Sbjct: 533 PTWLAP 538


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GKVEPSW 7
GK+ P W
Sbjct: 203 GKIRPGW 209


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 5 PSWLGP 10
P+WL P
Sbjct: 533 PTWLAP 538


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 5 PSWLGP 10
P+WL P
Sbjct: 533 PTWLAP 538


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 PSWLGP 10
P+WL P
Sbjct: 489 PTWLAP 494


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 5 PSWLGP 10
P+WL P
Sbjct: 494 PTWLAP 499


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 PSWLGP 10
P+WL P
Sbjct: 500 PTWLSP 505


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 PSWLGP 10
P+WL P
Sbjct: 491 PTWLSP 496


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 PSWLGP 10
P+WL P
Sbjct: 428 PTWLSP 433


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 5 PSWLGP 10
P+WL P
Sbjct: 437 PTWLSP 442


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GKVE--PSWLGP 10
GKV P+WL P
Sbjct: 484 GKVPRLPTWLSP 495


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GKVEPSW 7
GK+ P W
Sbjct: 203 GKIRPGW 209


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 5 PSWLGP 10
P W+GP
Sbjct: 259 PLWIGP 264


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 EPSWL 8
EPSWL
Sbjct: 33 EPSWL 37


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 PSWLGP 10
P+WL P
Sbjct: 491 PTWLSP 496


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 PSWLGP 10
P+WL P
Sbjct: 489 PTWLSP 494


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 5 PSWLGP 10
P+WL P
Sbjct: 429 PTWLSP 434


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 EPSWLG 9
EP+W+G
Sbjct: 845 EPAWIG 850


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 PSWLGP 10
P+WL P
Sbjct: 490 PTWLSP 495


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 PSWLGP 10
P+WL P
Sbjct: 485 PAWLAP 490


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 1 GKVEPSWLGP 10
G P W+GP
Sbjct: 257 GSSGPLWVGP 266


>sp|SYT_METKA|THREONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 PSWLGP 10
P+WL P
Sbjct: 499 PTWLSP 504


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 PSWLGP 10
P+WL P
Sbjct: 487 PTWLAP 492


>sp|TKSU_THEKO|TK-SUBTILISIN kodakarensis (strain ATCC BAA-918

Query: 4 EPSWLG 9
+PSWLG
Sbjct: 95 KPSWLG 100


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 PSWLGP 10
P+WL P
Sbjct: 459 PAWLAP 464


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKVEPSW 7
GKV P W
Sbjct: 48 GKVYPPW 54


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 5 PSWLGP 10
P+WL P
Sbjct: 490 PTWLSP 495


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GKVEPSW 7
G++E SW
Sbjct: 83 GRIEQSW 89


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KVEPSWLG 9
++EPSWL
Sbjct: 92 ELEPSWLA 99


>sp|GUAAA_METTP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothrix

Query: 1 GKVEPSWLG 9
GKVEP +G
Sbjct: 84 GKVEPGKVG 92


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 4 EPSWLG 9
+PSW+G
Sbjct: 745 KPSWIG 750


>sp|AGL11_HALVD|LOW-SALT glycan biosynthesis nucleotidyltransferase Agl11|Haloferax volcanii

Query: 2 KVEPSWLG 9
++EPSW G
Sbjct: 185 QLEPSWRG 192


>sp|DNLI_THEFM|DNA ligase|Thermococcus fumicolans

Query: 1 GKVEPSW 7
GKV P W
Sbjct: 47 GKVFPDW 53


>sp|DNLI_THEKO|DNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GKVEPSW 7
GKV P W
Sbjct: 47 GKVFPDW 53


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GKVEPSWLG 9
GK+ P W G
Sbjct: 47 GKLGPDWKG 55


>sp|DNLI_THEON|DNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 GKVEPSW 7
GKV P W
Sbjct: 50 GKVFPDW 56


>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 5 PSWLGP 10
P W+GP
Sbjct: 261 PLWVGP 266


>sp|RL21_NANEQ|LARGE ribosomal subunit protein eL21|Nanoarchaeum equitans (strain

Query: 3 VEPSW 7
+EPSW
Sbjct: 46 IEPSW 50


>sp|TRUA_HALMA|TRNA pseudouridine synthase A|Haloarcula marismortui (strain ATCC

Query: 5 PSWLGP 10
P+WL P
Sbjct: 71 PAWLSP 76




164|Sequence|816|825|SWLGPLFPDK

>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 WLGPLFPDK 10
W+GP PDK
Sbjct: 168 WIGPFHPDK 176


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WLGPLFPDK 10
W+G FP+K
Sbjct: 165 WIGDFFPEK 173


>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WLGPLFP 8
W+G LFP
Sbjct: 80 WIGHLFP 86


>sp|TRPC_PYRAB|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 LGPLFPDK 10
L PL PDK
Sbjct: 172 LAPLIPDK 179


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 2 WLGPLFPDK 10
WLGPL +K
Sbjct: 280 WLGPLKDEK 288


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus (strain

Query: 2 WLGPLFPDK 10
WLGPL +K
Sbjct: 279 WLGPLKNEK 287


>sp|THIE_ARCFU|THIAMINE-PHOSPHATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LGPLFPDK 10
+GP+FP K
Sbjct: 126 VGPVFPTK 133


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 2 WLGPL 6
WLGPL
Sbjct: 276 WLGPL 280


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 2 WLGPL 6
WLGPL
Sbjct: 277 WLGPL 281


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 2 WLGPL 6
WLGPL
Sbjct: 277 WLGPL 281


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 LGPLFPDK 10
LGP F DK
Sbjct: 69 LGPTFDDK 76


>sp|TRM1_PYRNV|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum neutrophilum

Query: 2 WLGPL 6
WLGPL
Sbjct: 261 WLGPL 265


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 2 WLGPL 6
WLGPL
Sbjct: 276 WLGPL 280


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GPLFPD 9
GP+FP+
Sbjct: 284 GPIFPE 289


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 2 WLGPL 6
W+GPL
Sbjct: 271 WMGPL 275


>sp|NASB_HALMT|PROBABLE nitrate transporter|Haloferax mediterranei (strain ATCC 33500

Query: 1 SWLGPLF 7
+W GPLF
Sbjct: 159 NWSGPLF 165


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 2 WLGPL 6
W+GPL
Sbjct: 261 WIGPL 265


>sp|DCD_STAMF|DCTP deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 3 LGPLFPD 9
+ PLFPD
Sbjct: 19 INPLFPD 25


>sp|RS4_HYPBU|SMALL ribosomal subunit protein uS4|Hyperthermus butylicus (strain DSM

Query: 2 WLGPLFP 8
W+GP P
Sbjct: 11 WMGPKHP 17


>sp|RS4_SULAC|SMALL ribosomal subunit protein uS4|Sulfolobus acidocaldarius (strain

Query: 2 WLGPLFP 8
W+GP P
Sbjct: 11 WMGPSHP 17


>sp|PUS10_PYRFU|TRNA pseudouridine synthase Pus10|Pyrococcus furiosus (strain ATCC

Query: 2 WLGPLFP 8
W+G FP
Sbjct: 87 WVGSRFP 93


>sp|COXX2_PYRCJ|PROTOHEME IX farnesyltransferase 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SWLGPL 6
+WLGPL
Sbjct: 100 AWLGPL 105


>sp|ENGB_METKA|PROBABLE GTP-binding protein EngB|Methanopyrus kandleri (strain AV19 /

Query: 2 WLGPLFP 8
WL LFP
Sbjct: 162 WLDTLFP 168




165|Sequence|821|830|LFPDKTSNLR

>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 2 FPDKTSN 8
+PDK+SN
Sbjct: 19 YPDKSSN 25


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 LFPDKTSNLR 10
L PD NLR
Sbjct: 1042 LMPDMIGNLR 1051


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 1 LFPDKTSNL 9
FPDKT ++
Sbjct: 138 FFPDKTGSV 146




166|Sequence|826|835|TSNLRKQTNI

***** No hits found ******


167|Sequence|831|840|KQTNIASTLA

***** No hits found ******


168|Sequence|836|845|ASTLARMVIR

>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ASTLARMVIR 10
A LAR+VIR
Sbjct: 360 AGYLARLVIR 369


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ASTLARMVIR 10
A LAR+VIR
Sbjct: 360 AGYLARLVIR 369


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ASTLARMVIR 10
A LAR+VIR
Sbjct: 359 AGYLARLVIR 368




169|Sequence|841|850|RMVIRYQMKS

***** No hits found ******


170|Sequence|846|855|YQMKSAVEEG

>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 3 MKSAVEEG 10
++SA+EEG
Sbjct: 181 VRSAIEEG 188




171|Sequence|851|860|AVEEGTASGS

>sp|TRMI_METJA|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 2 VEEGTASGS 10
VE GT SG+
Sbjct: 92 VEAGTGSGA 100


>sp|CH60_METAC|CHAPERONIN GroEL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AVEEGTASG 9
AVEEG +G
Sbjct: 405 AVEEGVVTG 413


>sp|CH60_METMA|CHAPERONIN GroEL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AVEEGTASG 9
AVEEG +G
Sbjct: 405 AVEEGVVTG 413




172|Sequence|856|865|TASGSDGNFS

>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TASGSDGNFS 10
TA G D NFS
Sbjct: 636 TAQGEDMNFS 645


>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 3 SGSDGN 8
SGSDGN
Sbjct: 120 SGSDGN 125


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 3 SGSDGNFS 10
SGS GNF+
Sbjct: 227 SGSAGNFT 234


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 4 GSDGNF 9
G DGNF
Sbjct: 189 GDDGNF 194


>sp|YPV8_METTF|UNCHARACTERIZED protein ORF8|Methanothermobacter thermautotrophicus

Query: 1 TASGSDGN 8
TASG GN
Sbjct: 242 TASGGPGN 249




173|Sequence|861|870|DGNFSEDVLS

>sp|MTAP_NITMS|S-METHYL-5'-THIOADENOSINE phosphorylase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DGNFSED 7
DG+FSED
Sbjct: 116 DGSFSED 122


>sp|PURQ_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DGNFSEDV 8
+GN SEDV
Sbjct: 164 NGNISEDV 171


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 1 DGNFSEDVL 9
DG+ SEDVL
Sbjct: 562 DGSHSEDVL 570


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DGNFSED 7
DG F+ED
Sbjct: 368 DGTFTED 374


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 1 DGNFSED 7
+G+FSED
Sbjct: 97 EGSFSED 103


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DGNFSEDVL 9
DG SED L
Sbjct: 87 DGRLSEDYL 95


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GNFSEDVLS 10
G F+ED+++
Sbjct: 411 GEFTEDIIA 419


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 4 FSEDVLS 10
FS+DVLS
Sbjct: 45 FSQDVLS 51


>sp|HIS1_SULTO|ATP phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 2 GNFSED 7
GNFS+D
Sbjct: 26 GNFSDD 31




174|Sequence|866|875|EDVLSKFDEW

>sp|RFRNP_HALVD|RNA-FREE ribonuclease P|Haloferax volcanii (strain ATCC 29605

Query: 1 EDVLSKFDEW 10
EDVL K D W
Sbjct: 72 EDVLGKLDTW 81


>sp|HIS4_METAR|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocella arvoryzae (strain

Query: 1 EDVLSKFD 8
ED++SKFD
Sbjct: 69 EDIVSKFD 76


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EDVLSKFD 8
ED+ SKFD
Sbjct: 190 EDLFSKFD 197


>sp|CBIT_METMP|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 EDVLSKFD 8
ED++SKFD
Sbjct: 90 EDLISKFD 97


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LSKFDEW 10
++KFDEW
Sbjct: 50 VAKFDEW 56


>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 1 EDVLSKFDEW 10
+DVL K DE+
Sbjct: 49 DDVLPKIDEY 58


>sp|Y1407_ARCFU|UNCHARACTERIZED protein AF_1407|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EDVLSKFD 8
ED++SKFD
Sbjct: 30 EDIVSKFD 37


>sp|Y002_METMP|UPF0425 pyridoxal phosphate-dependent protein MMP0002|Methanococcus

Query: 1 EDVLSKFDE 9
E++LSK DE
Sbjct: 134 EEILSKIDE 142


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 EDVLSKFDE 9
EDV+ K DE
Sbjct: 518 EDVIKKIDE 526


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DVLSKFDE 9
DVL +FDE
Sbjct: 312 DVLKEFDE 319


>sp|RS24_METS5|SMALL ribosomal subunit protein eS24|Metallosphaera sedula (strain ATCC

Query: 1 EDVLSKFD 8
+DVLSKF+
Sbjct: 87 KDVLSKFE 94


>sp|MCRB_METFE|METHYL-COENZYME M reductase subunit beta|Methanothermus fervidus

Query: 1 EDVLSKFDEW 10
+DV SK DE+
Sbjct: 416 KDVFSKVDEF 425


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain OPF8)

Query: 1 EDVLSKFDEW 10
ED+ +D W
Sbjct: 206 EDIKDAYDSW 215


>sp|ADH_THEBA|ALCOHOL dehydrogenase|Thermococcus barophilus

Query: 1 EDVLSKFDE 9
E+ LSK DE
Sbjct: 337 EEFLSKLDE 345


>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 VLSKFDE 9
VLSK+DE
Sbjct: 10 VLSKYDE 16


>sp|NIKR3_METAC|PUTATIVE nickel-responsive regulator 3|Methanosarcina acetivorans (strain

Query: 1 EDVLSKFDE 9
+ +LSKFDE
Sbjct: 14 DTLLSKFDE 22


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DVLSKFDEW 10
D+L+ F +W
Sbjct: 442 DILTAFGDW 450


>sp|HAS8_HALS8|HALOCIN-S8 S8a

Query: 1 EDVLSKFDEW 10
+DV+S +DEW
Sbjct: 298 KDVISCWDEW 307


>sp|Y1631_HALSA|PUTATIVE ABC transporter ATP-binding protein|Halobacterium salinarum (strain

Query: 1 EDVLSKFD 8
EDV+S FD
Sbjct: 115 EDVVSTFD 122


>sp|NIKR2_METMA|PUTATIVE nickel-responsive regulator 2|Methanosarcina mazei (strain ATCC

Query: 1 EDVLSKFDE 9
+ +LSKFDE
Sbjct: 14 DTLLSKFDE 22


>sp|NIKR_THESM|PUTATIVE nickel-responsive regulator|Thermococcus sibiricus (strain DSM

Query: 1 EDVLSKFD 8
ED+L KFD
Sbjct: 12 EDLLEKFD 19


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DVLSKFDE 9
DV+ KFDE
Sbjct: 810 DVVRKFDE 817


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 1 EDVLSKFDEW 10
+D+ +K +EW
Sbjct: 94 DDITTKKEEW 103


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 VLSKFDEW 10
V SKF EW
Sbjct: 161 VFSKFIEW 168


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 VLSKFDEW 10
V SKF EW
Sbjct: 164 VFSKFIEW 171


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 VLSKFDEW 10
V SKF EW
Sbjct: 164 VFSKFIEW 171


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 VLSKFDEW 10
V SKF EW
Sbjct: 164 VFSKFIEW 171


>sp|Y1213_ARCFU|UNCHARACTERIZED protein AF_1213|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EDVLSKFDE 9
ED+ SK DE
Sbjct: 106 EDIQSKIDE 114


>sp|PDXT_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaera stadtmanae

Query: 2 DVLSKFDE 9
+VLSK+D+
Sbjct: 147 EVLSKYDD 154




175|Sequence|871|880|KFDEWTFIPD

>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KFDEWTFIP 9
KFDEW+ P
Sbjct: 52 KFDEWSRTP 60


>sp|DHQS_ARCFU|3-DEHYDROQUINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KFDEWTFIP 9
KF++W IP
Sbjct: 77 KFEDWKVIP 85


>sp|DHQS_HALSA|3-DEHYDROQUINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 DEWTFIP 9
D+WT IP
Sbjct: 139 DDWTIIP 145


>sp|DHQS_HALS3|3-DEHYDROQUINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 DEWTFIP 9
D+WT IP
Sbjct: 139 DDWTIIP 145


>sp|Y749_METJA|UNCHARACTERIZED protein MJ0749|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFDEWTFI 8
KFD W F+
Sbjct: 9 KFDNWGFM 16


>sp|CMR7B_SACS2|PUTATIVE CRISPR system CMR subunit|Saccharolobus solfataricus (strain ATCC

Query: 4 EWTFIP 9
EW FIP
Sbjct: 11 EWVFIP 16


>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FDEWTFIPD 10
DE FIPD
Sbjct: 128 LDETDFIPD 136


>sp|PELO_HALWD|PROTEIN pelota homolog|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DEWTFIPD 10
++WT +P+
Sbjct: 14 EQWTLVPE 21


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 4 EWTFIP 9
EW F+P
Sbjct: 114 EWDFVP 119


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 KFDEWTFIPD 10
+F +W +PD
Sbjct: 699 EFSKWAPVPD 708


>sp|LIVM_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 4 EWTFIP 9
+WTF P
Sbjct: 250 DWTFFP 255


>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 4 EWTFIP 9
EW FIP
Sbjct: 32 EWGFIP 37


>sp|DUT_ARCFU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Archaeoglobus

Query: 1 KFDEWTFIP 9
+F +W ++P
Sbjct: 66 EFRDWVYLP 74


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KFDEWTFIPD 10
+F W +PD
Sbjct: 700 EFSRWAPVPD 709


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KFDEWTFIPD 10
+F W +PD
Sbjct: 700 EFSRWAPVPD 709


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KFDEWTFIPD 10
+F W +PD
Sbjct: 699 EFSRWAPVPD 708


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KFDEWTFIPD 10
+F W +PD
Sbjct: 699 EFSRWAPVPD 708


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KFDEWTFIPD 10
+F W +PD
Sbjct: 699 EFSRWAPVPD 708


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KFDEWTFIPD 10
+F W +PD
Sbjct: 699 EFSRWAPVPD 708


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KFDEWTFIPD 10
+F W +PD
Sbjct: 699 EFSRWAPVPD 708


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KFDEWTFIPD 10
+F W +PD
Sbjct: 699 EFSRWAPVPD 708


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KFDEWTFIPD 10
+F W +PD
Sbjct: 699 EFSRWAPVPD 708


>sp|KTHY_METBU|PROBABLE thymidylate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 5 WTFIPD 10
WT IPD
Sbjct: 121 WTIIPD 126


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 KFDEWTFIPD 10
+F W +PD
Sbjct: 698 EFSRWAPVPD 707


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 2 FDEWTFIP 9
FD WT P
Sbjct: 76 FDPWTEFP 83


>sp|KTHY_METAC|PROBABLE thymidylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 WTFIPD 10
WT IPD
Sbjct: 124 WTVIPD 129


>sp|DHQS_HALWD|3-DEHYDROQUINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DEWTFIP 9
++WT IP
Sbjct: 152 EDWTIIP 158


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 FDEWTFIP 9
F++W ++P
Sbjct: 87 FEQWGYVP 94


>sp|KTHY_METHJ|PROBABLE thymidylate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 WTFIPD 10
WT +PD
Sbjct: 118 WTIMPD 123


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FDEWTFIP 9
FD + FIP
Sbjct: 352 FDGYAFIP 359


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 4 EWTFIP 9
EW F+P
Sbjct: 117 EWHFVP 122


>sp|KTHY_METBF|PROBABLE thymidylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 5 WTFIPD 10
WT +PD
Sbjct: 124 WTIVPD 129


>sp|KTHY_METMA|PROBABLE thymidylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 WTFIPD 10
WT +PD
Sbjct: 124 WTVVPD 129




176|Sequence|876|885|TFIPDSSMDS

>sp|G3P_THEVO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FIPDSS 7
F+PDSS
Sbjct: 50 FVPDSS 55




177|Sequence|881|890|SSMDSVFAQS

>sp|Y004_METJA|UNCHARACTERIZED protein MJ0004|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SSMDSVFAQS 10
SSM +VFA+S
Sbjct: 154 SSMCAVFAES 163




178|Sequence|886|895|VFAQSDDLDS

>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VFAQSDDLD 9
+FA SDDLD
Sbjct: 32 LFAISDDLD 40




179|Sequence|891|900|DDLDSEGSEG

>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 DDLDSEGSEG 10
DD+DSEG G
Sbjct: 682 DDIDSEGCGG 691


>sp|DGGGP_META3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DDLDSEGSEG 10
+DLD + SEG
Sbjct: 179 EDLDGDKSEG 188


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDLDSEG 7
DDLD EG
Sbjct: 304 DDLDVEG 310


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DDLDSEG 7
+DLDSEG
Sbjct: 307 EDLDSEG 313


>sp|Y2183_ARCFU|UNCHARACTERIZED protein AF_2183|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DSEGSEG 10
D+EGS+G
Sbjct: 151 DTEGSQG 157


>sp|PSA_THEON|PROTEASOME subunit alpha|Thermococcus onnurineus (strain NA1)

Query: 1 DDLDSEGS 8
DDLD EG+
Sbjct: 183 DDLDMEGA 190


>sp|NIFH_METMA|NITROGENASE iron protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DDLDSEGSEG 10
D L SEG EG
Sbjct: 58 DTLRSEGDEG 67


>sp|PSA_THEGJ|PROTEASOME subunit alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DDLDSEGS 8
DD+D EG+
Sbjct: 183 DDIDMEGA 190




180|Sequence|896|905|EGSEGSFLVK

>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 1 EGSEGSFLVK 10
EG+EG F V+
Sbjct: 67 EGTEGPFAVR 76


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 1 EGSEGSFLV 9
+G EGSFL+
Sbjct: 494 KGDEGSFLM 502


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 1 EGSEGSFLV 9
+G EGSFL+
Sbjct: 536 KGDEGSFLM 544


>sp|TRUD_METBU|PROBABLE tRNA pseudouridine synthase D|Methanococcoides burtonii (strain

Query: 1 EGSEGSFLV 9
EG+EG +L+
Sbjct: 44 EGTEGKYLI 52


>sp|Y367_PYRAB|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus abyssi

Query: 2 GSEGSFLVK 10
GSEG F++K
Sbjct: 269 GSEGMFVLK 277


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EGSEGSFL 8
EG++G+FL
Sbjct: 220 EGAQGTFL 227


>sp|Y1808_PYRHO|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus horikoshii

Query: 2 GSEGSFLVK 10
GS+G F+VK
Sbjct: 269 GSDGVFVVK 277


>sp|RS5_PYRAB|SMALL ribosomal subunit protein uS5|Pyrococcus abyssi (strain GE5 /

Query: 1 EGSEGSFLVK 10
EG EGS VK
Sbjct: 146 EGKEGSVRVK 155


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 1 EGSEGSFLVK 10
EG EGS VK
Sbjct: 145 EGKEGSVRVK 154


>sp|RS8_METKA|SMALL ribosomal subunit protein uS8|Methanopyrus kandleri (strain AV19

Query: 1 EGSEGSFLVK 10
+G G FLVK
Sbjct: 55 DGRSGKFLVK 64


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain

Query: 1 EGSEGSFLV 9
EG EG +L+
Sbjct: 43 EGQEGKYLI 51


>sp|PURA_METTP|ADENYLOSUCCINATE synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EGSEGSFL 8
EG++G+FL
Sbjct: 217 EGAQGAFL 224


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 1 EGSEGSFLV 9
EG EG +L+
Sbjct: 43 EGEEGKYLI 51


>sp|RRP42_ARCFU|EXOSOME complex component Rrp42|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EGSEGSFLVK 10
E +EGS LVK
Sbjct: 43 EKAEGSALVK 52


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 1 EGSEGSFLVK 10
EG+ G+F VK
Sbjct: 226 EGTVGNFKVK 235


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GSEGSFLVK 10
G EG+++VK
Sbjct: 197 GPEGNYMVK 205


>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EGSEGS 6
EGSEGS
Sbjct: 211 EGSEGS 216


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 2 GSEGSFLVK 10
G EG+++VK
Sbjct: 195 GPEGNYMVK 203


>sp|Y512_METJA|UNCHARACTERIZED protein MJ0512|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGSEGSFLV 9
EG EG++++
Sbjct: 223 EGKEGNYII 231




181|Sequence|901|910|SFLVKKKSNS

>sp|CMR4_SACS2|CRISPR system CMR subunit Cmr4|Saccharolobus solfataricus (strain ATCC

Query: 1 SFLVKKKSNS 10
SFL+K+ SN+
Sbjct: 58 SFLLKEYSNA 67




182|Sequence|906|915|KKSNSISVGE

>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KKSNSISVGE 10
+KSNSI +GE
Sbjct: 787 RKSNSIKLGE 796


>sp|COMB_METJA|2-PHOSPHOSULFOLACTATE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKSNSISVGE 10
KK N+I +GE
Sbjct: 47 KKENAIYIGE 56


>sp|RUVB_METHJ|HOLLIDAY junction branch migration complex|Methanospirillum hungatei JF-1

Query: 2 KSNSISVGE 10
K+ SISVGE
Sbjct: 281 KTISISVGE 289


>sp|Y408_ARCFU|UNCHARACTERIZED protein AF_0408|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KSNSISVGE 10
K+N I VGE
Sbjct: 131 KANGIEVGE 139


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 2 KSNSISVGE 10
K NSI +GE
Sbjct: 297 KYNSIKIGE 305


>sp|GFCR_METJA|TRANSCRIPTIONAL regulator GfcR|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KSNSISVGE 10
KSN +++GE
Sbjct: 17 KSNGLTIGE 25




183|Sequence|911|920|ISVGEFYRDA

>sp|HIS7_METAR|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ISVGEFYRDA 10
IS+GE YRDA
Sbjct: 72 ISLGEAYRDA 81


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ISVGEFYRD 9
I++ EFYRD
Sbjct: 316 ITIAEFYRD 324


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ISVGEFYRD 9
ISVGEF D
Sbjct: 408 ISVGEFTED 416


>sp|PGP_HALMA|PHOSPHOGLYCOLATE phosphatase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ISVGEFYRD 9
++VGE YRD
Sbjct: 88 LAVGESYRD 96


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SVGEFYRD 9
++GE++RD
Sbjct: 316 TIGEYFRD 323


>sp|RS4E_HYPBU|SMALL ribosomal subunit protein eS4|Hyperthermus butylicus (strain DSM

Query: 1 ISVGEFYR 8
+ GEFYR
Sbjct: 94 VDTGEFYR 101


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 SVGEFYRD 9
++GE++RD
Sbjct: 303 TIGEYFRD 310


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 5 EFYRDA 10
EFYRDA
Sbjct: 181 EFYRDA 186


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 ISVGEFYRDA 10
+S GE Y DA
Sbjct: 444 VSAGEVYYDA 453


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 2 SVGEFYRD 9
++GE++RD
Sbjct: 311 TIGEYFRD 318


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SVGEFYRD 9
++GE++RD
Sbjct: 316 TLGEYFRD 323


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SVGEFYRD 9
++GE++RD
Sbjct: 316 TLGEYFRD 323


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 ISVGEFY 7
++VGEFY
Sbjct: 1497 VTVGEFY 1503


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ISVGEFYRDA 10
I G+F RDA
Sbjct: 359 IYAGQFVRDA 368


>sp|KDGK_THEAC|2-DEHYDRO-3-DEOXYGLUCONOKINASE acidophilum (strain ATCC 25905

Query: 4 GEFYRD 9
G+FYRD
Sbjct: 263 GDFYRD 268


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 SVGEFYRD 9
++GE++RD
Sbjct: 316 TLGEYFRD 323


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 SVGEFYRD 9
++GE++RD
Sbjct: 316 TLGEYFRD 323


>sp|Y035_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 VGEFYR 8
VGEFY+
Sbjct: 231 VGEFYK 236


>sp|Y572_METJA|UNCHARACTERIZED protein MJ0572|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ISVGEFYRDA 10
I + FYRDA
Sbjct: 35 IELNPFYRDA 44




184|Sequence|916|925|FYRDAVLQRC

>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 2 YRDAVLQRC 10
Y DA L+RC
Sbjct: 51 YADATLRRC 59


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 2 YRDAVLQRC 10
Y DA L+RC
Sbjct: 51 YADATLRRC 59


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 YRDAVLQRC 10
Y D VL RC
Sbjct: 52 YADTVLTRC 60


>sp|IF2G_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 2 YRDAVLQRC 10
Y DA +RC
Sbjct: 50 YADATFRRC 58


>sp|IF2G_HALLT|TRANSLATION initiation factor 2 subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 YRDAVLQRC 10
Y DA +RC
Sbjct: 51 YADATFRRC 59


>sp|YNH2_METBA|UNCHARACTERIZED protein in nifH2 5'region|Methanosarcina barkeri

Query: 3 RDAVLQRC 10
R AVL RC
Sbjct: 100 RGAVLDRC 107


>sp|Y586_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0586|Methanocaldococcus

Query: 3 RDAVLQRC 10
RD+++Q C
Sbjct: 2 RDSIMQMC 9


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 YRDAVLQ 8
YRDA+L+
Sbjct: 64 YRDAILK 70




185|Sequence|921|930|VLQRCSPNLQ

>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VLQRCSPNLQ 10
V+++C P+L+
Sbjct: 263 VIEKCKPSLE 272


>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VLQRCSPN 8
V RC+PN
Sbjct: 108 VRMRCAPN 115


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VLQRCSPN 8
V RC+PN
Sbjct: 108 VRMRCAPN 115




186|Sequence|926|935|SPNLQRHSNS

>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 2 PNLQRHSN 9
PN++ HSN
Sbjct: 110 PNIEHHSN 117


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PNLQRHSNS 10
PNL H+N+
Sbjct: 29 PNLSSHANN 37


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PNLQRHSNS 10
PNL+ HS++
Sbjct: 457 PNLETHSDA 465




187|Sequence|931|940|RHSNSLGPIF

>sp|RL3_METKA|LARGE ribosomal subunit protein uL3|Methanopyrus kandleri (strain AV19 /

Query: 1 RHSNSLGPI 9
RH S+GPI
Sbjct: 236 RHIGSIGPI 244


>sp|RL3_METMP|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain DSM

Query: 1 RHSNSLGP 8
RH+ S+GP
Sbjct: 229 RHTGSIGP 236


>sp|RL3_METM7|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C7

Query: 1 RHSNSLGP 8
RH+ S+GP
Sbjct: 229 RHTGSIGP 236


>sp|RL3_METM6|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C6

Query: 1 RHSNSLGP 8
RH+ S+GP
Sbjct: 229 RHTGSIGP 236


>sp|RL3_METM5|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C5

Query: 1 RHSNSLGP 8
RH+ S+GP
Sbjct: 229 RHTGSIGP 236


>sp|AROD_HALMA|3-DEHYDROQUINATE dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RHSNSLGPIF 10
RHS ++ P++
Sbjct: 184 RHSRAVAPVY 193


>sp|RL3_META3|LARGE ribosomal subunit protein uL3|Methanococcus aeolicus (strain ATCC

Query: 1 RHSNSLGP 8
RH+ S+GP
Sbjct: 228 RHTGSIGP 235


>sp|RL3_METTH|LARGE ribosomal subunit protein uL3|Methanothermobacter

Query: 1 RHSNSLGP 8
RH SLGP
Sbjct: 230 RHIGSLGP 237


>sp|CHEF2_HALS3|TAXIS protein CheF2|Halobacterium salinarum (strain ATCC 29341

Query: 1 RHSNSLGPI 9
RH S GPI
Sbjct: 175 RHMGSTGPI 183


>sp|DTDA_NATPD|D-AMINOACYL-TRNA deacylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RHSNSLGPIF 10
RHS GP+
Sbjct: 79 RHSGDTGPLL 88


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RHSNSLGPIF 10
RHS GP+
Sbjct: 74 RHSGDTGPLL 83


>sp|ENO_PYRAE|ENOLASE aerophilum (strain ATCC 51768

Query: 1 RHSNSLGP 8
+HS LGP
Sbjct: 150 KHSRGLGP 157


>sp|NADE_PYRHO|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HSNSLGPI 9
H+NSLG I
Sbjct: 118 HANSLGRI 125


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 SLGPIF 10
SLGP+F
Sbjct: 102 SLGPVF 107


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 SLGPIF 10
SLGP+F
Sbjct: 115 SLGPVF 120


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 SLGPIF 10
SLGP+F
Sbjct: 88 SLGPVF 93


>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 1 RHSNSLGP 8
RH S+GP
Sbjct: 230 RHVGSIGP 237


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RHSNSLGPIF 10
RHS GP+
Sbjct: 70 RHSGDTGPLL 79


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RHSNSLGPIF 10
RHS GP+
Sbjct: 70 RHSGDTGPLL 79


>sp|RL3_METS3|LARGE ribosomal subunit protein uL3|Methanobrevibacter smithii (strain

Query: 1 RHSNSLGP 8
RH S+GP
Sbjct: 229 RHVGSIGP 236


>sp|RL3_METJA|LARGE ribosomal subunit protein uL3|Methanocaldococcus jannaschii (strain

Query: 1 RHSNSLGP 8
RH S+GP
Sbjct: 230 RHVGSIGP 237


>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 2 HSNSLGP 8
HSN+L P
Sbjct: 154 HSNTLSP 160




188|Sequence|936|945|LGPIFDHEDL

>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 GPIFDHED 9
GP+FDHE+
Sbjct: 60 GPMFDHEE 67


>sp|PYRH_PYRCJ|URIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GPIFDHEDL 10
G IFD EDL
Sbjct: 8 GRIFDEEDL 16


>sp|THIE_METBF|THIAMINE-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LGPIFD 6
LGPIFD
Sbjct: 137 LGPIFD 142


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 GPIFDHED 9
GP+F+H++
Sbjct: 60 GPMFEHDE 67


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGPIFDHED 9
LGP F +ED
Sbjct: 205 LGPKFQYED 213


>sp|PYRK_THEAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma acidophilum

Query: 2 GPIFDHEDL 10
GP+FD E L
Sbjct: 219 GPVFDIEQL 227


>sp|HLY_NATA1|HALOLYSIN asiatica (strain ATCC 700177

Query: 2 GPIFDHEDL 10
G +DHEDL
Sbjct: 159 GIQYDHEDL 167


>sp|PYRK_THEVO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma volcanium

Query: 2 GPIFDHEDL 10
GP+F+ E+L
Sbjct: 219 GPVFNIEEL 227


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 3 PIFDHEDL 10
P+FD+E +
Sbjct: 354 PVFDYEQM 361


>sp|LYSJ_PYRHO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 GPIFDH 7
GP+F+H
Sbjct: 60 GPMFNH 65


>sp|PYRH_PYRAR|URIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GPIFDHEDL 10
G +FD+E+L
Sbjct: 9 GRVFDNEEL 17


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LGPIFDHEDL 10
+ +FDH+D+
Sbjct: 106 MARVFDHKDV 115


>sp|MFNB_METMP|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 IFDHEDL 10
+FDH DL
Sbjct: 160 LFDHMDL 166


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 4 IFDHEDL 10
I++HED+
Sbjct: 293 IYEHEDI 299


>sp|ACDB1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 1 LGPIFDHED 9
+ PIF +ED
Sbjct: 213 INPIFAYED 221


>sp|END4_METMJ|PROBABLE endonuclease 4|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LGPIFDH 7
+GP+ DH
Sbjct: 61 IGPVVDH 67


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPIFDHED 9
GP DH+D
Sbjct: 352 GPTRDHDD 359


>sp|END4_METLZ|PROBABLE endonuclease 4|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LGPIFDH 7
+GP+ DH
Sbjct: 61 IGPVVDH 67


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LGPIFD 6
+GP+FD
Sbjct: 268 IGPVFD 273




189|Sequence|941|950|DHEDLLKRKR

>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 HEDLLKR 8
HE+LLKR
Sbjct: 379 HEELLKR 385


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 HEDLLKR 8
HE+LLKR
Sbjct: 400 HEELLKR 406


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 HEDLLKR 8
HE+LLKR
Sbjct: 400 HEELLKR 406


>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HEDLLKRKR 10
+EDL+K KR
Sbjct: 27 YEDLMKGKR 35


>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 1 DHEDLLKRKR 10
DHE +KR R
Sbjct: 84 DHEQRVKRSR 93


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 1 DHEDLLKRKR 10
DHE +KR R
Sbjct: 84 DHEQRVKRSR 93


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 1 DHEDLLKRKR 10
DHE +KR R
Sbjct: 84 DHEQRVKRSR 93


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 1 DHEDLLKRKR 10
DHE +KR R
Sbjct: 84 DHEQRVKRSR 93


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 1 DHEDLLKRKR 10
DHE +KR R
Sbjct: 84 DHEQRVKRSR 93


>sp|ENDA_ARCFU|TRNA-SPLICING endonuclease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DHEDLLKRKR 10
D E+L+KR R
Sbjct: 201 DREELVKRAR 210


>sp|Y1461_METJA|UNCHARACTERIZED protein MJ1461|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HEDLLKR 8
HED+LK+
Sbjct: 33 HEDILKK 39




190|Sequence|946|955|LKRKRKILSS

>sp|Y1613_METJA|UNCHARACTERIZED protein MJ1613|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKRKRKILSS 10
K KRK+LS+
Sbjct: 36 FKNKRKVLST 45




191|Sequence|951|960|KILSSDDSLR

>sp|PURQ_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KILSSDDSLR 10
KIL SDD L+
Sbjct: 209 KILGSDDGLK 218


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 ILSSDDSLR 10
IL+ DDSLR
Sbjct: 114 ILTGDDSLR 122


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 2 ILSSDDSLR 10
IL+ DDS+R
Sbjct: 112 ILTGDDSIR 120


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 ILSSDDSLR 10
+L+ DDS+R
Sbjct: 108 VLTGDDSIR 116


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 ILSSDDSLR 10
IL+ DDS+R
Sbjct: 108 ILTGDDSIR 116




192|Sequence|956|965|DDSLRSSKLQ

>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DSLRSSKLQ 10
D LRS KL+
Sbjct: 53 DKLRSEKLE 61




193|Sequence|961|970|SSKLQSHMRH

***** No hits found ******


194|Sequence|966|975|SHMRHSDSIS

>sp|HTPX_METTH|PROTEASE HtpX homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 SHMRHSDSI 9
SH++HSD I
Sbjct: 149 SHIKHSDMI 157


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HMRHSDSIS 10
H+ H++SIS
Sbjct: 257 HLTHTESIS 265


>sp|Y150_ARCFU|UNCHARACTERIZED protein AF_0150|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HMRHSDSI 9
H RH+DS+
Sbjct: 74 HWRHADSV 81


>sp|HTPX2_SULTO|PROTEASE HtpX homolog 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HMRHSDS 8
H+RH D+
Sbjct: 150 HLRHKDT 156




195|Sequence|971|980|SDSISSLASE

***** No hits found ******


196|Sequence|976|985|SLASEREYIT

>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 2 LASEREY 8
LASE+EY
Sbjct: 363 LASEKEY 369


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 3 ASEREYIT 10
A EREYI
Sbjct: 20 AEEREYIA 27




197|Sequence|981|990|REYITSLDLS

>sp|TRPE_ARCFU|ANTHRANILATE synthase component 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 REYITSLDLS 10
REY+ DLS
Sbjct: 179 REYVVDTDLS 188


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 REYITSLDL 9
REY SLDL
Sbjct: 13 REYGESLDL 21


>sp|TRM5B_METJA|TRNA (guanine(37)-N(1))-methyltransferase Trm5b|Methanocaldococcus

Query: 1 REYITSLDL 9
REYI +LD
Sbjct: 323 REYILALDF 331


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 EYITSLDLS 10
+YIT DLS
Sbjct: 104 KYITGTDLS 112


>sp|PYRB_SULAC|ASPARTATE carbamoyltransferase catalytic subunit|Sulfolobus acidocaldarius

Query: 3 YITSLDLS 10
YI SLDL+
Sbjct: 240 YIVSLDLA 247


>sp|FEN_SULAC|FLAP endonuclease 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YITSLDLS 10
YI S+DLS
Sbjct: 159 YINSIDLS 166




198|Sequence|986|995|SLDLSANELR

>sp|PHAE_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloferax mediterranei (strain ATCC 33500

Query: 3 DLSANELR 10
D+SANE R
Sbjct: 86 DVSANEFR 93


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 3 DLSANELR 10
D SANE+R
Sbjct: 131 DKSANEIR 138


>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 3 DLSANELR 10
D SANE+R
Sbjct: 131 DKSANEIR 138


>sp|HLY_NATA1|HALOLYSIN asiatica (strain ATCC 700177

Query: 1 SLDLSANE 8
S+DLS NE
Sbjct: 499 SVDLSGNE 506


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 LDLSANELR 10
LDLS NE++
Sbjct: 400 LDLSDNEVK 408




199|Sequence|991|1000|ANELRDIDAL

>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NELRDIDA 9
NEL+D+DA
Sbjct: 112 NELKDLDA 119


>sp|PDXT_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfurisphaera tokodaii

Query: 2 NELRDIDAL 10
N+L+D+DA+
Sbjct: 39 NDLKDVDAI 47


>sp|PHAE_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloferax mediterranei (strain ATCC 33500

Query: 1 ANELRDI 7
ANE RDI
Sbjct: 89 ANEFRDI 95


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NELRDIDA 9
NELRD+ A
Sbjct: 66 NELRDLGA 73


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 ANELRDI 7
AN+LRDI
Sbjct: 327 ANQLRDI 333


>sp|CDC67_HALSA|ORC1-TYPE DNA replication protein 7|Halobacterium salinarum (strain ATCC

Query: 1 ANELRDI 7
AN+LRDI
Sbjct: 320 ANQLRDI 326


>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NELRDIDAL 10
NEL D+D++
Sbjct: 380 NELGDVDSI 388


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ANELRDI 7
AN+LRDI
Sbjct: 222 ANQLRDI 228


>sp|GYAR_THEKO|GLYOXYLATE reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NELRDIDAL 10
++RD+DAL
Sbjct: 41 KKVRDVDAL 49


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 ANELRDIDA 9
A+E+RD++A
Sbjct: 356 ADEVRDVEA 364


>sp|CDC6_THEKO|ORC1-TYPE DNA replication protein|Thermococcus kodakarensis (strain ATCC

Query: 1 ANELRDI 7
AN+LRDI
Sbjct: 219 ANQLRDI 225


>sp|CDC6_PYRFU|ORC1-TYPE DNA replication protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ANELRDI 7
AN+LRDI
Sbjct: 223 ANQLRDI 229


>sp|CDC6_THEON|ORC1-TYPE DNA replication protein|Thermococcus onnurineus (strain NA1)

Query: 1 ANELRDI 7
AN+LRDI
Sbjct: 219 ANQLRDI 225




200|Sequence|996|1005|DIDALSQKCC

>sp|PURA_HALSA|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DIDALSQKC 9
DIDA+ ++C
Sbjct: 186 DIDAIHEQC 194


>sp|PURA_HALS3|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DIDALSQKC 9
DIDA+ ++C
Sbjct: 186 DIDAIHEQC 194


>sp|MER_METTM|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 DIDALSQKCC 10
DID + CC
Sbjct: 198 DIDVAAYTCC 207


>sp|MER_METTH|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DIDALSQKCC 10
DID + CC
Sbjct: 198 DIDVAAYTCC 207


>sp|Y1032_METJA|UNCHARACTERIZED protein MJ1032|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIDALSQKC 9
D+D S+KC
Sbjct: 81 DVDVESEKC 89


>sp|PSA_METPE|PROTEASOME subunit alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DIDALSQKCC 10
D++ LS+K C
Sbjct: 109 DVEMLSKKLC 118


>sp|PSA_METS3|PROTEASOME subunit alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 IDALSQKCC 10
+D+LS+K C
Sbjct: 110 VDSLSKKLC 118




201|Sequence|1001|1010|SQKCCISVHL

>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 1 SQKCCISVH 9
S KC IS H
Sbjct: 291 SNKCYISTH 299




202|Sequence|1006|1015|ISVHLEHLEK

>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ISVHLEHLEK 10
I+ H EHL K
Sbjct: 299 ITAHREHLAK 308


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ISVHLEHLEK 10
IS+ +EHL++
Sbjct: 263 ISITIEHLKR 272


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ISVHLEHLEK 10
I++H E LEK
Sbjct: 4 ITLHYEDLEK 13


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ISVHLEHLEK 10
I++H E LEK
Sbjct: 4 ITLHYEDLEK 13




203|Sequence|1011|1020|EHLEKLELHQ

>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EHLEKLEL 8
EHL KLE
Sbjct: 41 EHLSKLEF 48


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter

Query: 1 EHLEKLE 7
EHLEKLE
Sbjct: 76 EHLEKLE 82


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 LEKLELHQ 10
+EK+E HQ
Sbjct: 69 VEKVEFHQ 76


>sp|PGP_METS3|PHOSPHOGLYCOLATE phosphatase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EHLEKLELH 9
E+L+K+EL+
Sbjct: 139 EYLDKIELY 147


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LEKLELHQ 10
+EK+E HQ
Sbjct: 69 VEKVEFHQ 76


>sp|Y3527_METJA|UNCHARACTERIZED protein MJECL27|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EHLEKLELHQ 10
E++EKLEL +
Sbjct: 12 EYVEKLELQK 21




204|Sequence|1016|1025|LELHQNALTS

>sp|PSTB_METJA|PHOSPHATE import ATP-binding protein PstB|Methanocaldococcus jannaschii

Query: 2 ELHQNALT 9
ELH+NAL+
Sbjct: 141 ELHKNALS 148


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 2 ELHQNALTS 10
E+H ALTS
Sbjct: 314 EMHAKALTS 322




205|Sequence|1021|1030|NALTSFPQQL

>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NALTSFPQQL 10
NALT F +QL
Sbjct: 346 NALTCFEEQL 355


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ALTSFPQQL 10
ALT+F +QL
Sbjct: 348 ALTAFEEQL 356




206|Sequence|1026|1035|FPQQLCETLK

>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 FPQQLCETLK 10
FP+ ETLK
Sbjct: 188 FPEDQAETLK 197


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 1 FPQQLCETLK 10
FP+ ETLK
Sbjct: 188 FPEDQAETLK 197


>sp|KADA_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FPQQLCETLK 10
FP+++ ET++
Sbjct: 101 FPKEVIETIR 110


>sp|YE7B_METJA|UNCHARACTERIZED protein MJ1479.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FPQQLCE 7
FP +LCE
Sbjct: 44 FPDELCE 50




207|Sequence|1031|1040|CETLKSLTHL

>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ETLKSLTH 9
ETL+ LTH
Sbjct: 219 ETLRDLTH 226


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ETLKSLTH 9
ETL+ LTH
Sbjct: 219 ETLRDLTH 226


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 ETLKSLTHL 10
E++KSL HL
Sbjct: 112 ESIKSLMHL 120




208|Sequence|1036|1045|SLTHLDLHSN

>sp|Y952_METM7|UPF0179 protein MmarC7_0952|Methanococcus maripaludis (strain C7 /

Query: 1 SLTHLDLHSN 10
+LTH+D+H +
Sbjct: 89 TLTHVDVHCD 98


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LTHLDLHSN 10
L HLD H N
Sbjct: 138 LRHLDAHEN 146


>sp|Y704_METJA|UNCHARACTERIZED protein MJ0704|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SLTHLDLH 8
SLTH+ LH
Sbjct: 126 SLTHVQLH 133


>sp|Y1728_METM5|UPF0179 protein MmarC5_1728|Methanococcus maripaludis (strain C5 /

Query: 1 SLTHLDLHSN 10
+LTH D+H +
Sbjct: 89 TLTHSDIHCD 98


>sp|Y993_METM6|UPF0179 protein MmarC6_0993|Methanococcus maripaludis (strain C6 /

Query: 1 SLTHLDLHSN 10
+LTH D+H +
Sbjct: 89 TLTHSDVHCD 98


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 1 SLTHLDLH 8
SL++LDLH
Sbjct: 305 SLSYLDLH 312


>sp|DCDB_METJA|DCTP deaminase, dUMP-forming|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SLTHLDLH 8
SL HLD H
Sbjct: 194 SLIHLDNH 201


>sp|DPHB_METTP|DIPHTHINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SLTHLDL 7
S THLDL
Sbjct: 88 STTHLDL 94




209|Sequence|1041|1050|DLHSNKFTSF

>sp|PUR5_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LHSNKFTS 9
LHSN FT+
Sbjct: 179 LHSNGFTT 186


>sp|PUR5_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LHSNKFTS 9
LHSN FT+
Sbjct: 179 LHSNGFTT 186


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 2 LHSNKFTSF 10
H N FT+F
Sbjct: 152 FHKNGFTTF 160


>sp|PSB_METFA|PROTEASOME subunit beta|Methanocaldococcus fervens (strain DSM 4213

Query: 2 LHSNKFTSF 10
LHSN++ F
Sbjct: 93 LHSNRYFPF 101


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HSNKFTSF 10
+SNKFT++
Sbjct: 116 YSNKFTTY 123


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DLHSNKFTSF 10
D++ +KFTS+
Sbjct: 422 DVNVSKFTSY 431




210|Sequence|1046|1055|KFTSFPSYLL

>sp|AROD_IGNH4|3-DEHYDROQUINATE dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 TSFPSYLL 10
T FPSY L
Sbjct: 144 TDFPSYFL 151


>sp|PROF_HEILC|HEIMDALL profilin|Heimdallarchaeota archaeon (strain LC_2)

Query: 1 KFTSFPSYLL 10
K T++P YL+
Sbjct: 87 KCTNYPGYLV 96


>sp|Y2164_ARCFU|UNCHARACTERIZED protein AF_2164|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KFTSFPSYL 9
F+SFP Y+
Sbjct: 11 SFSSFPEYV 19




211|Sequence|1051|1060|PSYLLKMSCI

>sp|Y049_PYRAE|UNCHARACTERIZED serpin-like protein PAE0049|Pyrobaculum aerophilum (strain ATCC

Query: 1 PSYLLKMSCI 10
P+YL K+ CI
Sbjct: 99 PNYLNKLRCI 108


>sp|G1PDH_STAMF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Staphylothermus marinus (strain ATCC

Query: 1 PSYLLKM 7
P YLLKM
Sbjct: 26 PDYLLKM 32


>sp|TRPF_METTH|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PSYLLKMSCI 10
P YLL+ C+
Sbjct: 189 PEYLLEFDCL 198




212|Sequence|1056|1065|KMSCIANLDV

>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 MSCIANLD 9
++CI NLD
Sbjct: 229 IACIENLD 236


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 2 MSCIANLD 9
++CI NLD
Sbjct: 229 IACIENLD 236


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 2 MSCIANLD 9
++CI NLD
Sbjct: 229 IACIENLD 236


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 MSCIANLD 9
++CI NLD
Sbjct: 229 IACIENLD 236


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 MSCIANLD 9
++CI NLD
Sbjct: 229 IACIENLD 236


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 MSCIANLD 9
++CI NLD
Sbjct: 229 IACIENLD 236


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 MSCIANLD 9
++CI NLD
Sbjct: 229 IACIENLD 236


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 MSCIANLD 9
++CI NLD
Sbjct: 229 IACIENLD 236


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 MSCIANLD 9
++CI NLD
Sbjct: 229 IACIENLD 236


>sp|MDH_ARCFU|MALATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SCIANLDV 10
+C+ NLDV
Sbjct: 18 TCLLNLDV 25


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 SCIANLDV 10
+C++NLD+
Sbjct: 714 NCLSNLDL 721


>sp|Y1584_METJA|UNCHARACTERIZED protein MJ1584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KMSCIANLD 9
+ SCI N+D
Sbjct: 101 RQSCIMNID 109




213|Sequence|1061|1070|ANLDVSRNDI

>sp|RPO11_KORCO|DNA-DIRECTED RNA polymerase subunit Rpo11|Korarchaeum cryptofilum (strain

Query: 3 LDVSRNDI 10
+DVSRN+I
Sbjct: 6 VDVSRNEI 13


>sp|RL24_PICTO|LARGE ribosomal subunit protein uL24|Picrophilus torridus (strain ATCC

Query: 3 LDVSRND 9
LD+SRND
Sbjct: 84 LDLSRND 90


>sp|FLAH_METJA|ARCHAEAL flagellar ATP-binding protein FlaH|Methanocaldococcus jannaschii

Query: 1 ANLDVSRNDI 10
A +D+SR+D+
Sbjct: 7 ARIDLSRDDL 16


>sp|QUEC_PICTO|7-CYANO-7-DEAZAGUANINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 NLDVSRNDI 10
N+DV ND+
Sbjct: 75 NIDVPENDL 83




214|Sequence|1066|1075|SRNDIGPSVV

>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 NDIGPSVV 10
NDIGP ++
Sbjct: 274 NDIGPKIL 281


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 SRNDIGPSV 9
SR D+GP V
Sbjct: 990 SRIDLGPKV 998


>sp|CAS4_SACS2|CRISPR-ASSOCIATED exonuclease Cas4|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RNDIGPSVV 10
RND G S+V
Sbjct: 103 RNDNGKSIV 111


>sp|PGK_AERPE|PHOSPHOGLYCERATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 NDIGPSVV 10
DIGPS V
Sbjct: 306 KDIGPSTV 313


>sp|GLFT_THEAC|GLUTAMATE formimidoyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RNDIGPSVV 10
+ D GPSVV
Sbjct: 160 KPDFGPSVV 168


>sp|CDC6I_HALMA|ORC1-TYPE DNA replication protein 9|Haloarcula marismortui (strain ATCC

Query: 3 NDIGPSV 9
N+IGP+V
Sbjct: 57 NEIGPAV 63




215|Sequence|1071|1080|GPSVVLDPTV

>sp|PURA_METMA|ADENYLOSUCCINATE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPSVVLDPTV 10
GP VVL+P V
Sbjct: 67 GPGVVLNPEV 76


>sp|UPP_AERPE|URACIL phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GPSVVLDPTV 10
GP+VVLDP +
Sbjct: 129 GPAVVLDPML 138


>sp|PURA_METTP|ADENYLOSUCCINATE synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GPSVVLDPTV 10
GP VVL+P V
Sbjct: 67 GPGVVLNPKV 76


>sp|PURA_METBF|ADENYLOSUCCINATE synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GPSVVLDPTV 10
GP VVL+P V
Sbjct: 67 GPGVVLNPEV 76


>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GPSVVLDPTV 10
GP VVL+P V
Sbjct: 67 GPGVVLNPEV 76


>sp|TSR3_METKA|16S rRNA aminocarboxypropyltransferase|Methanopyrus kandleri (strain

Query: 3 SVVLDPTV 10
+VVLDPTV
Sbjct: 38 AVVLDPTV 45


>sp|PURK_SACS2|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 GPSVVLDPT 9
GPS +L P+
Sbjct: 291 GPSTILSPS 299


>sp|TSR3_VULDI|16S rRNA aminocarboxypropyltransferase|Vulcanisaeta distributa

Query: 3 SVVLDPTV 10
S++LDPTV
Sbjct: 42 SIILDPTV 49


>sp|TRCM_PYRAB|TRNA (cytosine(49)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5

Query: 2 PSVVLDP 8
P VVLDP
Sbjct: 102 PPVVLDP 108


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPSVVLDPTV 10
G VVLDP V
Sbjct: 494 GRDVVLDPAV 503


>sp|TSR3_METBF|16S rRNA aminocarboxypropyltransferase|Methanosarcina barkeri (strain

Query: 3 SVVLDPTV 10
+++LDPTV
Sbjct: 48 AILLDPTV 55


>sp|RL21_METM5|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 4 VVLDPTV 10
VVLDP+V
Sbjct: 42 VVLDPSV 48


>sp|RL21_METM7|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 4 VVLDPTV 10
VVLDP+V
Sbjct: 42 VVLDPSV 48


>sp|RL21_METM6|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 4 VVLDPTV 10
VVLDP+V
Sbjct: 42 VVLDPSV 48


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 GPSVVLDPTV 10
GP V+L P++
Sbjct: 248 GPDVILFPSL 257


>sp|TSR3_SACS2|16S rRNA aminocarboxypropyltransferase|Saccharolobus solfataricus

Query: 1 GPSVVLDP 8
G VVLDP
Sbjct: 33 GKGVVLDP 40


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 1 GPSVVLDP 8
GP +V DP
Sbjct: 49 GPKIVCDP 56


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PSVVLDPTV 10
P +V+DPT+
Sbjct: 153 PGLVIDPTM 161


>sp|RL21_METMP|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 4 VVLDPTV 10
VVLDP+V
Sbjct: 42 VVLDPSV 48


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GPSVVLDPT 9
GPSV+ PT
Sbjct: 23 GPSVLTPPT 31


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 1 GPSVVLDP 8
GP+VVL P
Sbjct: 71 GPNVVLGP 78


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GPSVVLDPTV 10
GP VL+P V
Sbjct: 67 GPGTVLNPEV 76


>sp|ACDD_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit delta|Archaeoglobus fulgidus

Query: 3 SVVLDPT 9
S+V+DPT
Sbjct: 324 SIVMDPT 330


>sp|RRP42_THEKO|EXOSOME complex component Rrp42|Thermococcus kodakarensis (strain ATCC

Query: 1 GPSVVLDPTV 10
G S+V+DP++
Sbjct: 202 GNSIVVDPSL 211


>sp|NADK_METB6|NAD kinase|Methanoregula boonei (strain DSM 21154

Query: 1 GPSVVLDP 8
G +VVLDP
Sbjct: 29 GHTVVLDP 36




216|Sequence|1076|1085|LDPTVKCPTL

>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LDPTVKCPT 9
L PT++CPT
Sbjct: 164 LAPTIRCPT 172


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LDPTVKCPT 9
L P+++CPT
Sbjct: 164 LAPSIRCPT 172


>sp|TSR3_VULDI|16S rRNA aminocarboxypropyltransferase|Vulcanisaeta distributa

Query: 1 LDPTVKCP 8
LDPTVK P
Sbjct: 45 LDPTVKTP 52


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 2 DPTVKCP 8
DPT CP
Sbjct: 249 DPTTTCP 255


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 PTVKCPT 9
P ++CPT
Sbjct: 163 PVIRCPT 169


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 3 PTVKCPTL 10
P KCP L
Sbjct: 294 PNTKCPVL 301


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 1 LDPTVKCP 8
L+P V CP
Sbjct: 269 LEPQVACP 276


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 1 LDPTVKCP 8
L+P V CP
Sbjct: 272 LEPQVACP 279


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 LDPTVKCP 8
L+P V CP
Sbjct: 269 LEPQVACP 276


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 1 LDPTVKCPT 9
++P KCPT
Sbjct: 52 IEPGQKCPT 60


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 1 LDPTVKCPT 9
++P KCPT
Sbjct: 52 IEPGQKCPT 60


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 1 LDPTVKCP 8
L+P V CP
Sbjct: 267 LEPQVACP 274


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter

Query: 1 LDPTVKCPT 9
+DP+++C T
Sbjct: 54 IDPSLRCRT 62


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 LDPTVKCPT 9
LD TVK PT
Sbjct: 391 LDITVKVPT 399


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain

Query: 6 KCPTL 10
KCPTL
Sbjct: 30 KCPTL 34


>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PTVKCPT 9
PTVK PT
Sbjct: 209 PTVKDPT 215


>sp|RF1_THEVO|PEPTIDE chain release factor subunit|Thermoplasma volcanium (strain ATCC

Query: 4 TVKCPT 9
T KCPT
Sbjct: 330 TYKCPT 335


>sp|HEM3_METBF|PROBABLE porphobilinogen deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PTVKCPTL 10
PT++ PTL
Sbjct: 80 PTIRPPTL 87


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 LDPTVK 6
LDPT+K
Sbjct: 495 LDPTIK 500




217|Sequence|1081|1090|KCPTLKQFNL

>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 2 CPTLKQFNL 10
CP +KQ+N+
Sbjct: 514 CPPVKQYNM 522


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 2 CPTLKQFNL 10
C LKQ+N+
Sbjct: 513 CSPLKQYNM 521


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 2 CPTLKQFNL 10
C LKQ+N+
Sbjct: 513 CSPLKQYNM 521


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 TLKQFN 9
TLKQFN
Sbjct: 399 TLKQFN 404


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 2 CPTLKQFNL 10
CP KQ++L
Sbjct: 507 CPYKKQYDL 515


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CPTLKQF 8
CP +KQ+
Sbjct: 515 CPPMKQY 521


>sp|BIOF_METJA|PUTATIVE 8-amino-7-oxononanoate synthase|Methanocaldococcus jannaschii

Query: 4 TLKQFNL 10
TLK FNL
Sbjct: 206 TLKHFNL 212


>sp|FTR_METJA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPTLK 6
CPTLK
Sbjct: 228 CPTLK 232


>sp|FTRL_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Archaeoglobus fulgidus (strain ATCC

Query: 2 CPTLK 6
CPTLK
Sbjct: 225 CPTLK 229


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CPTLKQFN 9
CP LK+ N
Sbjct: 526 CPVLKEEN 533


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 CPTLKQFN 9
CP LK+ N
Sbjct: 526 CPVLKEEN 533


>sp|SYR_METM6|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 CPTLKQFN 9
CP LK+ N
Sbjct: 526 CPVLKEEN 533


>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 CPTLKQFN 9
CP LK+ N
Sbjct: 526 CPVLKEEN 533




218|Sequence|1086|1095|KQFNLSYNQL

>sp|RL10_METTH|LARGE ribosomal subunit protein uL10|Methanothermobacter

Query: 1 KQFNLSYN 8
K FNL+YN
Sbjct: 246 KSFNLAYN 253


>sp|GGR3_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 3|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KQFNLSYNQL 10
K FN YNQ+
Sbjct: 141 KSFNKEYNQI 150


>sp|ILVC_METMA|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina mazei (strain ATCC

Query: 3 FNLSYNQL 10
FN+ YNQ+
Sbjct: 110 FNIHYNQI 117


>sp|ILVC_METBU|KETOL-ACID reductoisomerase (NADP(+))|Methanococcoides burtonii (strain DSM

Query: 3 FNLSYNQL 10
FN+ YNQ+
Sbjct: 110 FNIHYNQI 117


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 3 FNLSYNQL 10
FN+ YNQ+
Sbjct: 110 FNIHYNQI 117


>sp|ILVC_METAC|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 3 FNLSYNQL 10
FN+ YNQ+
Sbjct: 110 FNIHYNQI 117


>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 3 FNLSYNQL 10
FN+ YNQ+
Sbjct: 133 FNIHYNQI 140


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 3 FNLSYNQL 10
FN+ YNQ+
Sbjct: 111 FNIHYNQI 118


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 KQFNLSY 7
KQ+NLSY
Sbjct: 610 KQWNLSY 616


>sp|CMR5_SACS2|CRISPR system CMR subunit Cmr5|Saccharolobus solfataricus (strain ATCC

Query: 1 KQFNLSYNQL 10
+ FNL YN L
Sbjct: 15 EAFNLVYNAL 24




219|Sequence|1091|1100|SYNQLSFVPE

>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 3 NQLSFVPE 10
N +SFVPE
Sbjct: 362 NGVSFVPE 369


>sp|DTDA_PYRHO|D-AMINOACYL-TRNA deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NQLSFVPE 10
NQL F PE
Sbjct: 65 NQLGFKPE 72


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SYNQLS 6
SYNQLS
Sbjct: 53 SYNQLS 58


>sp|Y1483_METJA|UNCHARACTERIZED protein MJ1483|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NQLSFVPE 10
N L+FVPE
Sbjct: 49 NILTFVPE 56




220|Sequence|1096|1105|SFVPENLTDV

>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VPENLTD 9
VPENLTD
Sbjct: 401 VPENLTD 407


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SFVPENLTDV 10
+F PE LTDV
Sbjct: 314 AFPPEELTDV 323


>sp|Y1676_METJA|UNCHARACTERIZED protein MJ1676|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SFVPENLTD 9
SFVPENL +
Sbjct: 56 SFVPENLIE 64


>sp|RNP3_ARCFU|RIBONUCLEASE P protein component 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FVPENLTDV 10
F PENL D+
Sbjct: 7 FFPENLPDL 15


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 VPENLTDV 10
VP NLTDV
Sbjct: 272 VPPNLTDV 279


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 VPENLTDV 10
VP NLTDV
Sbjct: 272 VPPNLTDV 279


>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 1 SFVPENLT 8
SFVPE+L+
Sbjct: 278 SFVPEDLS 285


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FVPENLTDV 10
F+PENL V
Sbjct: 477 FIPENLRQV 485


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 SFVPENLTDV 10
SFV E+LTD+
Sbjct: 245 SFVTEHLTDL 254


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 2 FVPENL 7
FVPENL
Sbjct: 117 FVPENL 122


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 1 SFVPEN 6
SFVPEN
Sbjct: 454 SFVPEN 459


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VPENLT 8
VPENLT
Sbjct: 398 VPENLT 403


>sp|PELO_HALWD|PROTEIN pelota homolog|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SFVPENLTDV 10
+ VPEN+ D+
Sbjct: 17 TLVPENVDDL 26


>sp|PELO_HALLT|PROTEIN pelota homolog|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 SFVPENLTDV 10
+ VPEN+ D+
Sbjct: 17 TLVPENVDDL 26


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 3 VPENLTDV 10
VPENL+++
Sbjct: 216 VPENLSEL 223


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 1 SFVPENLTDV 10
+FV E+LTD+
Sbjct: 245 NFVTEHLTDL 254


>sp|Y772_ARCFU|UNCHARACTERIZED protein AF_0772|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FVPENLTDV 10
F+PE TDV
Sbjct: 151 FLPERGTDV 159


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 ENLTDV 10
ENLTDV
Sbjct: 66 ENLTDV 71




221|Sequence|1101|1110|NLTDVVEKLE

>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 2 LTDVVEKLE 10
LTDV+EK+E
Sbjct: 167 LTDVIEKIE 175


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 LTDVVEKLE 10
LTD EKLE
Sbjct: 273 LTDAAEKLE 281


>sp|RAD50_SULTO|DNA double-strand break repair Rad50|Sulfurisphaera tokodaii (strain

Query: 1 NLTDVVEKL 9
NLTD+ EKL
Sbjct: 319 NLTDLEEKL 327


>sp|PYRDB_METTH|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanothermobacter

Query: 1 NLTDVVE 7
N+TD+VE
Sbjct: 167 NVTDIVE 173


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 NLTDVVEKL 9
NLTDV EK+
Sbjct: 67 NLTDVNEKI 75


>sp|RL11_METBU|LARGE ribosomal subunit protein uL11|Methanococcoides burtonii (strain

Query: 1 NLTDVVEKL 9
N+ DV+EK+
Sbjct: 30 NIKDVIEKI 38


>sp|RL1_METTL|LARGE ribosomal subunit protein uL1|Methanothermococcus

Query: 1 NLTDVVEKLE 10
NLT +VE+L+
Sbjct: 138 NLTPLVERLK 147


>sp|SYC_HALSA|CYSTEINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NLTDVVEKL 9
N+TDV EK+
Sbjct: 67 NVTDVNEKI 75




222|Sequence|1106|1115|VEKLEQLILE

>sp|RNH2_PYRNV|RIBONUCLEASE HII|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 EKLEQLILE 10
E+L QLILE
Sbjct: 49 ERLYQLILE 57


>sp|TRPD_METLZ|ANTHRANILATE phosphoribosyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 VEKLEQLIL 9
+EKLE LIL
Sbjct: 324 LEKLENLIL 332


>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EKLEQLILE 10
EK+E +ILE
Sbjct: 142 EKIEAVILE 150


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 1 VEKLEQLI 8
V+KLEQL+
Sbjct: 311 VKKLEQLL 318


>sp|Y911_METJA|MAGNESIUM-CHELATASE subunit ChlI homolog|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EKLEQLILE 10
EKLEQ+I E
Sbjct: 331 EKLEQMINE 339




223|Sequence|1111|1120|QLILEGNKIS

>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 ILEGNKIS 10
+LEGNK+S
Sbjct: 604 LLEGNKMS 611


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LILEGNKIS 10
+++EGN+IS
Sbjct: 20 ILIEGNRIS 28


>sp|Y1290_METJA|UNCHARACTERIZED protein MJ1290|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LILEGNKIS 10
+ILE NKIS
Sbjct: 268 IILENNKIS 276


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain

Query: 1 QLILEGNKIS 10
Q++ +GNK+S
Sbjct: 69 QIVYKGNKVS 78


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4

Query: 1 QLILEGNKIS 10
Q++ +GNK+S
Sbjct: 69 QIVYKGNKVS 78


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25

Query: 1 QLILEGNKIS 10
Q++ +GNK+S
Sbjct: 69 QIVYKGNKVS 78


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain

Query: 1 QLILEGNKIS 10
Q++ +GNK+S
Sbjct: 69 QIVYKGNKVS 78


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LILEGNKI 9
+I+EGNKI
Sbjct: 2553 IIIEGNKI 2560


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 QLILEGNKIS 10
Q++ +GNK+S
Sbjct: 69 QIVYKGNKVS 78


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain

Query: 1 QLILEGNKIS 10
Q++ +GNK+S
Sbjct: 69 QIVYKGNKVS 78


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain

Query: 1 QLILEGNKIS 10
Q++ +GNK+S
Sbjct: 69 QIVYKGNKVS 78


>sp|RRP4_NITMS|EXOSOME complex component Rrp4|Nitrosopumilus maritimus (strain SCM1)

Query: 3 ILEGNKI 9
+LEGNKI
Sbjct: 26 VLEGNKI 32


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 3 ILEGNKI 9
I+EGNKI
Sbjct: 182 IVEGNKI 188


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 1 QLILEGNKI 9
+L+L+GN+I
Sbjct: 276 KLVLDGNEI 284


>sp|IF6_PYRAE|TRANSLATION initiation factor 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LILEGNKIS 10
LIL GNK++
Sbjct: 104 LILAGNKVA 112


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 3 ILEGNKI 9
I+EGNKI
Sbjct: 258 IVEGNKI 264


>sp|IF6_PYRAR|TRANSLATION initiation factor 6|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LILEGNKIS 10
LIL GNK++
Sbjct: 104 LILAGNKVA 112


>sp|RL6_SACS2|LARGE ribosomal subunit protein uL6|Saccharolobus solfataricus (strain

Query: 1 QLILEGNKI 9
Q+ L+GNKI
Sbjct: 45 QISLDGNKI 53


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 QLILEGNKIS 10
+L+LEGN+ S
Sbjct: 425 ELLLEGNEES 434


>sp|NEP1_THESM|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus sibiricus (strain

Query: 3 ILEGNKIS 10
+LEG KIS
Sbjct: 188 VLEGEKIS 195




224|Sequence|1116|1125|GNKISGICSP

>sp|AATE_SACI7|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GNKISGICSP 10
G KI+ CSP
Sbjct: 119 GEKITVYCSP 128


>sp|AATE_SACI6|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GNKISGICSP 10
G KI+ CSP
Sbjct: 119 GEKITVYCSP 128


>sp|AATE_SACI4|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GNKISGICSP 10
G KI+ CSP
Sbjct: 119 GEKITVYCSP 128


>sp|AATE_SACI3|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain M.16.27)

Query: 1 GNKISGICSP 10
G KI+ CSP
Sbjct: 119 GEKITVYCSP 128


>sp|AATE_SACI2|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GNKISGICSP 10
G KI+ CSP
Sbjct: 119 GEKITVYCSP 128


>sp|AATE_SACI1|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GNKISGICSP 10
G KI+ CSP
Sbjct: 119 GEKITVYCSP 128


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 ISGICSP 10
+SG+C P
Sbjct: 521 VSGVCEP 527


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GNKISGICSP 10
GNK G C P
Sbjct: 432 GNKHCGKCGP 441


>sp|RL15E_METST|LARGE ribosomal subunit protein eL15|Methanosphaera stadtmanae (strain

Query: 2 NKISGICS 9
NKI+ ICS
Sbjct: 147 NKINWICS 154


>sp|TRPC_METTM|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 1 GNKISGIC 8
GN++S IC
Sbjct: 46 GNRVSLIC 53


>sp|MTRE_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 1 GNKISGIC 8
GN ++G+C
Sbjct: 231 GNPLTGLC 238




225|Sequence|1121|1130|GICSPLRLKE

>sp|GATB_AERPE|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 1 GICSPLRLKE 10
G+ PLRLKE
Sbjct: 262 GMTKPLRLKE 271


>sp|THSA_THEKO|CHAPERONIN subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GICSPLRLKE 10
GI PLR+K+
Sbjct: 493 GIIEPLRVKK 502


>sp|THSA_THEK1|CHAPERONIN subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 1 GICSPLRLKE 10
GI PLR+K+
Sbjct: 493 GIIEPLRVKK 502


>sp|THSA_HALSA|THERMOSOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 GICSPLRLK 9
GI PLR+K
Sbjct: 490 GIVEPLRVK 498


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis

Query: 1 GICSPLRLKE 10
+ SPL LKE
Sbjct: 68 AVASPLELKE 77


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 2 ICSPLRLKE 10
ICSPL ++E
Sbjct: 242 ICSPLSIEE 250


>sp|THS_METTL|CHAPERONIN subunit|Methanothermococcus thermolithotrophicus

Query: 1 GICSPLRLK 9
G+ PLR+K
Sbjct: 489 GVVEPLRVK 497


>sp|THS_METKA|THERMOSOME subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 GICSPLRLK 9
G+ PLR+K
Sbjct: 495 GVVEPLRVK 503


>sp|THS1_HALVD|CHAPERONIN subunit CTT1|Haloferax volcanii (strain ATCC 29605

Query: 1 GICSPLRLK 9
G+ PLR+K
Sbjct: 491 GVVEPLRVK 499


>sp|CBIM1_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 1 GICSPL 6
GIC PL
Sbjct: 116 GICGPL 121


>sp|THSA_THEAC|THERMOSOME subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GICSPLRLK 9
G+ PLR+K
Sbjct: 490 GVVDPLRVK 498


>sp|THS_METMP|CHAPERONIN subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 GICSPLRLK 9
G+ PLR+K
Sbjct: 487 GVVEPLRVK 495


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain

Query: 1 GICSPLRLKE 10
+ SP+ LKE
Sbjct: 71 AVASPIELKE 80


>sp|RADA_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 GICSPLRLKE 10
+ SP+ LKE
Sbjct: 63 AVASPIELKE 72


>sp|RADA_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 GICSPLRLKE 10
+ SP+ LKE
Sbjct: 67 AVASPIELKE 76




226|Sequence|1126|1135|LRLKELKILN

>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 3 LKELKILN 10
L E+KILN
Sbjct: 349 LNEIKILN 356


>sp|NADA_METBF|QUINOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RLKELKI 8
R+KELKI
Sbjct: 9 RIKELKI 15




227|Sequence|1131|1140|LKILNLSKNH

>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 1 LKILNLSKNH 10
L + NL+KNH
Sbjct: 318 LALANLTKNH 327


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LKILNLSK 8
LK+LN+SK
Sbjct: 100 LKVLNISK 107


>sp|TFE_CENSY|TRANSCRIPTION factor E|Cenarchaeum symbiosum (strain A)

Query: 2 KILNLSKN 9
K+LNL KN
Sbjct: 142 KVLNLKKN 149


>sp|CBIE_METJA|PROBABLE cobalt-precorrin-7 C(5)-methyltransferase|Methanocaldococcus

Query: 2 KILNLSKNH 10
K+LNL KNH
Sbjct: 135 KLLNLIKNH 143


>sp|RL3_METHJ|LARGE ribosomal subunit protein uL3|Methanospirillum hungatei JF-1

Query: 4 LNLSKNH 10
LNLSKN+
Sbjct: 114 LNLSKNY 120


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ILNLSKNH 10
ILN+ KNH
Sbjct: 333 ILNIIKNH 340


>sp|RL30_CENSY|LARGE ribosomal subunit protein uL30|Cenarchaeum symbiosum (strain A)

Query: 1 LKILNLSKNH 10
LK+L L K H
Sbjct: 24 LKLLRLEKKH 33


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 LKILNLSKNH 10
K+LN+S +H
Sbjct: 91 FKVLNISVHH 100


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 3 ILNLSKNH 10
I+NLSK H
Sbjct: 252 IINLSKMH 259


>sp|GLYA_HALLT|SERINE hydroxymethyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 2 KILNLSKNH 10
KIL+L NH
Sbjct: 113 KILSLDLNH 121


>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 ILNLSKNH 10
ILNL+K H
Sbjct: 144 ILNLAKEH 151




228|Sequence|1136|1145|LSKNHISSLS

***** No hits found ******


229|Sequence|1141|1150|ISSLSENFLE

>sp|COBD_METTP|PROBABLE cobalamin biosynthesis protein CobD|Methanothrix thermoacetophila

Query: 1 ISSLSENFLE 10
I SLSEN+++
Sbjct: 151 IESLSENYVD 160


>sp|MRE11_NANEQ|DNA double-strand break repair protein|Nanoarchaeum equitans (strain

Query: 2 SSLSENFL 9
+LSENFL
Sbjct: 292 KTLSENFL 299




230|Sequence|1146|1155|ENFLEACPKV

>sp|GUAAA_SULTO|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfurisphaera tokodaii

Query: 1 ENFLEACPK 9
+NF+EAC K
Sbjct: 180 KNFIEACKK 188


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ENFLEACPK 9
ENF+ AC +
Sbjct: 121 ENFIAACKR 129


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ENFLEAC 7
ENF+E C
Sbjct: 116 ENFIEEC 122


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ENFLEAC 7
ENF+E C
Sbjct: 114 ENFIEKC 120


>sp|GUAAA_METBF|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina barkeri

Query: 2 NFLEACPK 9
NFLE C K
Sbjct: 181 NFLEICEK 188


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ENFLEACPKV 10
E+FLEA KV
Sbjct: 391 EDFLEAVEKV 400


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ENFLEAC 7
ENF+E C
Sbjct: 114 ENFIEKC 120


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ENFLEAC 7
ENF+E C
Sbjct: 114 ENFIEKC 120


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NFLEACP 8
N+L +CP
Sbjct: 8 NYLSSCP 14


>sp|GUAAA_METS3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanobrevibacter

Query: 1 ENFLEACPK 9
ENF E C K
Sbjct: 177 ENFYEICKK 185


>sp|PHOU1_METTH|PHOSPHATE-SPECIFIC transport system accessory protein|Methanothermobacter

Query: 3 FLEACPKV 10
F+EAC KV
Sbjct: 84 FIEACIKV 91


>sp|Y816_METJA|UNCHARACTERIZED protein MJ0816|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENFLEACP 8
EN+L CP
Sbjct: 248 ENYLNYCP 255


>sp|GUAAA_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit A|Archaeoglobus fulgidus

Query: 2 NFLEACPK 9
NF+E C K
Sbjct: 176 NFIEICKK 183


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ENFLEACPKV 10
E FLEA KV
Sbjct: 391 EEFLEAVEKV 400


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ENFLEACP 8
E F+E+CP
Sbjct: 88 ELFVESCP 95


>sp|Y2310_ARCFU|MEMO1 family protein AF_2310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FLEACPKV 10
F+EA PK+
Sbjct: 98 FVEAMPKI 105


>sp|GUAAA_METTP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothrix

Query: 1 ENFLEAC 7
+NFLE C
Sbjct: 173 DNFLEIC 179


>sp|GUAAA_METAR|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocella arvoryzae

Query: 1 ENFLEAC 7
+NF+E C
Sbjct: 179 QNFIEVC 185


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NFLEACPKV 10
N+LE C K+
Sbjct: 461 NYLEFCKKL 469


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 4 LEACPK 9
L+ACPK
Sbjct: 353 LKACPK 358


>sp|GATC_METJA|PROBABLE glutamyl-tRNA(Gln) amidotransferase subunit C|Methanocaldococcus

Query: 1 ENFLEACPKV 10
E FL+ PKV
Sbjct: 58 EKFLKIAPKV 67




231|Sequence|1151|1160|ACPKVESFSA

>sp|Y668_METJA|UNCHARACTERIZED protein MJ0668|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ACPKVESFS 9
ACPK+E +
Sbjct: 73 ACPKLEEIN 81


>sp|APGM1_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanocaldococcus jannaschii (strain

Query: 3 PKVESFS 9
PK+E FS
Sbjct: 232 PKIEKFS 238


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ACPKVESF 8
A P++ESF
Sbjct: 51 AIPRIESF 58




232|Sequence|1156|1165|ESFSARMNFL

>sp|G3P_HALSA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SFSARMNF 9
SF+AR NF
Sbjct: 119 SFNARANF 126


>sp|G3P_HALS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 2 SFSARMNF 9
SF+AR NF
Sbjct: 119 SFNARANF 126


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 1 ESFSARMNF 9
++FS R+NF
Sbjct: 69 KTFSERLNF 77


>sp|G3P_NATPD|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SFSARMNF 9
SF+AR NF
Sbjct: 120 SFNARSNF 127




233|Sequence|1161|1170|RMNFLAAMPF

>sp|FBP_PYRFU|FRUCTOSE-1,6-BISPHOSPHATASE furiosus (strain ATCC 43587

Query: 3 NFLAAMPF 10
NF+A +PF
Sbjct: 91 NFIAGIPF 98




234|Sequence|1166|1175|AAMPFLPPSM

>sp|RSAMH_METJA|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AMPFLPPSM 10
A+P+ PPS+
Sbjct: 68 AIPYFPPSV 76


>sp|Y1098_METJA|UNCHARACTERIZED protein MJ1098|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PFLPPS 9
PF+PPS
Sbjct: 229 PFIPPS 234


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 4 PFLPP 8
PFLPP
Sbjct: 169 PFLPP 173


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 4 PFLPP 8
PFLPP
Sbjct: 169 PFLPP 173


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AAMPFLPP 8
A PF+PP
Sbjct: 112 GAEPFIPP 119


>sp|GATA_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 3 MPFLPPSM 10
MP LPP +
Sbjct: 394 MPILPPKI 401


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 AAMPFLPPSM 10
A PFL P M
Sbjct: 894 GAYPFLGPEM 903


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 AAMPFLPPSM 10
A PFL P M
Sbjct: 894 GAYPFLGPEM 903


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 AAMPFLPPSM 10
A PFL P M
Sbjct: 894 GAYPFLGPEM 903


>sp|GATA_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 3 MPFLPPSM 10
MP +PP +
Sbjct: 395 MPIIPPKL 402


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 AAMPFLPPSM 10
A PFL P M
Sbjct: 883 GAYPFLGPEM 892


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 PFLPPSM 10
P LPPS+
Sbjct: 280 PILPPSV 286


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 PFLPPSM 10
P LPPS+
Sbjct: 280 PILPPSV 286


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 PFLPPSM 10
P LPPS+
Sbjct: 280 PILPPSV 286


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 PFLPPSM 10
P LPPS+
Sbjct: 280 PILPPSV 286


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 PFLPPSM 10
P LPPS+
Sbjct: 280 PILPPSV 286


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 PFLPPSM 10
P LPPS+
Sbjct: 280 PILPPSV 286


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 3 MPFLPP 8
MPF PP
Sbjct: 222 MPFYPP 227


>sp|GATA_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfurisphaera tokodaii (strain DSM

Query: 3 MPFLPPSM 10
MP LPP +
Sbjct: 390 MPILPPKI 397


>sp|GATA_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Halobacterium salinarum (strain ATCC

Query: 3 MPFLPPSM 10
MP LPP +
Sbjct: 353 MPVLPPKL 360




235|Sequence|1171|1180|LPPSMTILKL

>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 2 PPSMTIL 8
PP MT+L
Sbjct: 593 PPEMTVL 599


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 2 PPSMTILKL 10
PP+ T LKL
Sbjct: 277 PPTSTCLKL 285


>sp|AMZA_METJA|ARCHAEMETZINCIN jannaschii (strain ATCC 43067

Query: 1 LPPSMTILKL 10
LPP+ +LK+
Sbjct: 111 LPPNKDVLKI 120




236|Sequence|1176|1185|TILKLSQNKF

>sp|DPO4_SULAC|DNA polymerase IV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ILKLSQNKF 10
+LKL+QNK+
Sbjct: 226 LLKLAQNKY 234


>sp|DPO4_SACSO|DNA polymerase IV|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 2 ILKLSQNKF 10
+LKL+QNK+
Sbjct: 226 LLKLAQNKY 234


>sp|MFNC_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate transaminase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ILKLSQNKF 10
ILKL QN F
Sbjct: 244 ILKLQQNLF 252




237|Sequence|1181|1190|SQNKFSCIPE

>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QNKFSCIPE 10
QNKF+ +P+
Sbjct: 614 QNKFAIVPD 622


>sp|Y1060_METJA|UNCHARACTERIZED protein MJ1060|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KFSCIPE 10
K+SCIP+
Sbjct: 356 KYSCIPD 362


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 SQNKFSCIPE 10
S + SC+PE
Sbjct: 297 SYSSISCLPE 306


>sp|Y1030_METLZ|UPF0210 protein Mlab_1030|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 NKFSC 7
NKFSC
Sbjct: 431 NKFSC 435




238|Sequence|1186|1195|SCIPEAILNL

>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IPEAILNL 10
IPE ILNL
Sbjct: 504 IPERILNL 511


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IPEAILNL 10
IPE ILNL
Sbjct: 504 IPERILNL 511


>sp|PCNA2_PYRAE|DNA polymerase sliding clamp 2|Pyrobaculum aerophilum (strain ATCC

Query: 3 IPEAILNL 10
+PEA+LN
Sbjct: 24 LPEAVLNF 31


>sp|FOLD_METB6|BIFUNCTIONAL protein FolD|Methanoregula boonei (strain DSM 21154

Query: 2 CIPEAILNL 10
C P+ I+NL
Sbjct: 136 CTPKGIMNL 144


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 3 IPEAILNL 10
IPE +LNL
Sbjct: 504 IPERVLNL 511


>sp|Y1200_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB12000|Pyrococcus abyssi (strain GE5 /

Query: 3 IPEAILN 9
IPE ILN
Sbjct: 90 IPEGILN 96


>sp|Y1031_SACS2|UNCHARACTERIZED solute-binding protein SSO1031|Saccharolobus solfataricus (strain

Query: 1 SCIPEAILNL 10
S IP+ ILNL
Sbjct: 378 SNIPQPILNL 387


>sp|RS15_PYRIL|SMALL ribosomal subunit protein uS15|Pyrobaculum islandicum (strain DSM

Query: 3 IPEAILNL 10
IPE +LNL
Sbjct: 84 IPEDLLNL 91


>sp|RS15_PYRAR|SMALL ribosomal subunit protein uS15|Pyrobaculum arsenaticum (strain

Query: 3 IPEAILNL 10
IPE +LNL
Sbjct: 87 IPEDLLNL 94


>sp|Y558_METJA|UNCHARACTERIZED protein MJ0558|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IPEAILN 9
+PEAI+N
Sbjct: 214 VPEAIVN 220


>sp|DNAG_SACS2|DNA primase DnaG|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SCIPEAILNL 10
S IPE ++NL
Sbjct: 199 SRIPETLINL 208


>sp|CDC62_ARCFU|ORC1-TYPE DNA replication protein 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 SCIPEAILN 9
SCI A+LN
Sbjct: 51 SCIKPAMLN 59


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 3 IPEAILN 9
+PEA++N
Sbjct: 27 VPEAVIN 33


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 2 CIPEAILNL 10
C PEA++++
Sbjct: 179 CEPEAVMHI 187


>sp|CYDE_METM7|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C7 /

Query: 3 IPEAILNL 10
IPE I+NL
Sbjct: 179 IPEEIINL 186


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 2 CIPEAILNL 10
C+ EA+ NL
Sbjct: 460 CVAEALRNL 468


>sp|Y2595_SACS2|UPF0310 protein SSO2595|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CIPEAILNL 10
C+ E++LN+
Sbjct: 141 CLKESLLNI 149




239|Sequence|1191|1200|AILNLPHLRS

>sp|Y3410_METJA|UNCHARACTERIZED protein MJECS10|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILNLPHLRS 10
ILNL HL S
Sbjct: 82 ILNLKHLYS 90


>sp|Y007_METJA|PUTATIVE dehydratase subunit MJ0007|Methanocaldococcus jannaschii (strain

Query: 2 ILNLPHLR 9
I++LPH++
Sbjct: 122 IMHLPHMK 129


>sp|BLH_HALSA|PROBABLE beta-carotene 15,15'-dioxygenase Blh|Halobacterium salinarum

Query: 1 AILNLPHL 8
A+L LPH+
Sbjct: 325 AVLTLPHV 332




240|Sequence|1196|1205|PHLRSLDMSS

>sp|TPIS_CENSY|TRIOSEPHOSPHATE isomerase|Cenarchaeum symbiosum (strain A)

Query: 1 PHLRSLDMSS 10
P LR LDM S
Sbjct: 108 PRLRGLDMIS 117


>sp|RLME_ARCFU|RIBOSOMAL RNA large subunit methyltransferase|Archaeoglobus fulgidus (strain

Query: 2 HLRSLDMS 9
HLRS+D++
Sbjct: 118 HLRSIDLA 125


>sp|GVPC1_HALSA|GAS vesicle protein C1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PHLRSLDMS 9
PHL++ DM+
Sbjct: 354 PHLQTHDMT 362


>sp|GVPC_HALMT|GAS vesicle protein C|Haloferax mediterranei (strain ATCC 33500

Query: 1 PHLRSLDMS 9
PHL++ DM+
Sbjct: 353 PHLQTHDMT 361


>sp|RLME_METTH|RIBOSOMAL RNA large subunit methyltransferase|Methanothermobacter

Query: 2 HLRSLDM 8
HLRS+D+
Sbjct: 130 HLRSVDL 136


>sp|RLME_METTP|RIBOSOMAL RNA large subunit methyltransferase|Methanothrix thermoacetophila

Query: 2 HLRSLDMS 9
H RS+D+S
Sbjct: 121 HARSIDLS 128


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 PHLRSLDM 8
P+LRS+D+
Sbjct: 49 PNLRSVDL 56




241|Sequence|1201|1210|LDMSSNDIQY

>sp|AROC_METVS|CHORISMATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LDMSSNDIQY 10
L ++ NDIQY
Sbjct: 33 LPLTENDIQY 42


>sp|RS15_STAMF|SMALL ribosomal subunit protein uS15|Staphylothermus marinus (strain

Query: 1 LDMSSNDIQ 9
LDMS +DI+
Sbjct: 26 LDMSPSDIE 34


>sp|ARGJ_METM6|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 DMSSNDIQY 10
DMS+ND Y
Sbjct: 225 DMSTNDTVY 233


>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DMSSNDIQY 10
DMS+ND Y
Sbjct: 225 DMSTNDTVY 233


>sp|ARGJ_METM5|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 DMSSNDIQY 10
DMS+ND Y
Sbjct: 225 DMSTNDTVY 233


>sp|ARGJ_METM7|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 DMSSNDIQY 10
DMS+ND Y
Sbjct: 225 DMSTNDTVY 233




242|Sequence|1206|1215|NDIQYLPGPA

>sp|DAPF_METAR|DIAMINOPIMELATE epimerase|Methanocella arvoryzae (strain DSM 22066

Query: 1 NDIQYLPGPA 10
+DI Y+ GPA
Sbjct: 256 SDIAYMEGPA 265


>sp|DPH2_METJA|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NDIQYLP 7
ND+ YLP
Sbjct: 270 NDVNYLP 276


>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 2 DIQYLPGPA 10
DIQ PGP
Sbjct: 183 DIQPFPGPG 191


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NDIQYLPGP 9
N +Q+LP P
Sbjct: 90 NSMQHLPKP 98


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 1 NDIQYLPGP 9
N I+YL GP
Sbjct: 403 NMIKYLAGP 411


>sp|GATB_METHJ|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 1 NDIQYLPGP 9
ND +Y P P
Sbjct: 265 NDYRYFPEP 273


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NDIQYLPGP 9
N +Q+LP P
Sbjct: 90 NSLQHLPKP 98


>sp|Y1641_METJA|UNCHARACTERIZED protein MJ1641|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NDIQYLPG 8
N ++YLPG
Sbjct: 138 NALKYLPG 145


>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NDIQYLP 7
NDI Y+P
Sbjct: 73 NDIMYIP 79


>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NDIQYLPGP 9
N++ YLP P
Sbjct: 270 NELSYLPCP 278


>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 1 NDIQYLPGP 9
ND +Y P P
Sbjct: 266 NDYRYFPEP 274


>sp|GUAAB_THEAC|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma acidophilum

Query: 2 DIQYLPGPA 10
D+Q PGP
Sbjct: 183 DLQPFPGPG 191


>sp|RS8_METLZ|SMALL ribosomal subunit protein uS8|Methanocorpusculum labreanum

Query: 2 DIQYLPG 8
+I+YLPG
Sbjct: 90 EIRYLPG 96


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 2 DIQYLP 7
DIQY+P
Sbjct: 53 DIQYIP 58


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 3 IQYLPGP 9
+QYLP P
Sbjct: 200 LQYLPTP 206


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 2 DIQYLP 7
DIQY+P
Sbjct: 54 DIQYIP 59


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC

Query: 2 DIQYLP 7
DIQY+P
Sbjct: 53 DIQYIP 58


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IQYLPGP 9
QY+PGP
Sbjct: 176 FQYIPGP 182


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DIQYLPGP 9
D++Y+P P
Sbjct: 585 DVRYIPEP 592


>sp|RN393_SACS2|CRISPR system ring nuclease SSO1393|Saccharolobus solfataricus (strain

Query: 1 NDIQYLPGP 9
ND+ LP P
Sbjct: 194 NDVVILPSP 202


>sp|PYRI_SULTO|ASPARTATE carbamoyltransferase regulatory chain|Sulfurisphaera tokodaii

Query: 1 NDIQYLPG 8
ND++ +PG
Sbjct: 119 NDVEAIPG 126


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NDIQYLPG 8
ND++ +PG
Sbjct: 209 NDLELMPG 216


>sp|URED_NATPD|UREASE accessory protein UreD|Natronomonas pharaonis (strain ATCC 35678

Query: 3 IQYLPGP 9
++Y+PGP
Sbjct: 129 LEYVPGP 135




243|Sequence|1211|1220|LPGPAHWKSL

>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 2 PGPAHWKS 9
PG A+WK+
Sbjct: 933 PGMAYWKA 940


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 4 PAHWKSL 10
P+HW+ L
Sbjct: 158 PSHWQQL 164


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 LPGPAH 6
LPGP H
Sbjct: 233 LPGPQH 238


>sp|DTDA_CALMQ|D-AMINOACYL-TRNA deacylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 GPAHWKSL 10
G HWKSL
Sbjct: 239 GIIHWKSL 246


>sp|RS4E_META3|SMALL ribosomal subunit protein eS4|Methanococcus aeolicus (strain ATCC

Query: 1 LPGPAHWK 8
LP P +W+
Sbjct: 13 LPAPKNWQ 20


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 1 LPGPAHWKS 9
+P PAH K+
Sbjct: 270 MPEPAHLKT 278


>sp|PANB_SULTO|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LPGPAHWKS 9
PG H+KS
Sbjct: 256 FPGKEHYKS 264


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 PGPAHWKS 9
PG WKS
Sbjct: 188 PGEPKWKS 195


>sp|TRPG_HALVD|ANTHRANILATE synthase component 2|Haloferax volcanii (strain ATCC 29605

Query: 2 PGPAHWKS 9
PGP H K+
Sbjct: 57 PGPGHPKN 64


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 4 PAHWK 8
P HWK
Sbjct: 452 PQHWK 456


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 4 PAHWK 8
P HWK
Sbjct: 452 PQHWK 456


>sp|TRPG1_HALMA|ANTHRANILATE synthase component II|Haloarcula marismortui (strain ATCC 43049

Query: 2 PGPAHWKS 9
PGP H K+
Sbjct: 65 PGPGHPKN 72


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PAHWK 8
P HWK
Sbjct: 154 PLHWK 158


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GPAHWKSL 10
G AHW ++
Sbjct: 389 GDAHWAAI 396


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 LPGPAHWKS 9
LPG H KS
Sbjct: 309 LPGSLHGKS 317


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 1 LPGPAHWKSL 10
LP P W+ L
Sbjct: 383 LPRPGEWRHL 392


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PGPAHWKS 9
PG HW +
Sbjct: 189 PGEPHWDA 196


>sp|RL39_METS3|LARGE ribosomal subunit protein eL39|Methanobrevibacter smithii (strain

Query: 2 PGPAHWK 8
P P HW+
Sbjct: 39 PKPRHWR 45


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PAHWKS 9
PA WKS
Sbjct: 702 PAEWKS 707


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 3 GPAHWKSL 10
G A WKSL
Sbjct: 285 GVADWKSL 292




244|Sequence|1216|1225|HWKSLNLREL

>sp|RL10_AERPE|LARGE ribosomal subunit protein uL10|Aeropyrum pernix (strain ATCC

Query: 2 WKSLNLREL 10
WK+L LREL
Sbjct: 17 WKTLMLREL 25


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 HWKSLNLRE 9
HW NL+E
Sbjct: 277 HWDQFNLKE 285


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HWKSLNLREL 10
+WK +N +EL
Sbjct: 402 YWKVMNEKEL 411


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 WKSLNLREL 10
WK L +REL
Sbjct: 707 WKLLEIREL 715


>sp|Y851_PICTO|UPF0179 protein PTO0851|Picrophilus torridus (strain ATCC 700027

Query: 1 HWKSLNLRE 9
H++ LN+RE
Sbjct: 45 HYRILNVRE 53


>sp|QUEE_THEKO|7-CARBOXY-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WKSLNLREL 10
WK L LRE+
Sbjct: 160 WKGLVLREV 168




245|Sequence|1221|1230|NLRELLFSHN

>sp|CAS2_METKA|CRISPR-ASSOCIATED endoribonuclease Cas2|Methanopyrus kandleri (strain AV19 /

Query: 2 LRELLFSH 9
LRELL SH
Sbjct: 30 LRELLESH 37


>sp|Y753_METJA|UNCHARACTERIZED protein MJ0753|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLRELLF 7
NLR+LLF
Sbjct: 202 NLRDLLF 208


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 5 LLFSHN 10
L+FSHN
Sbjct: 939 LMFSHN 944


>sp|RL10_METMA|LARGE ribosomal subunit protein uL10|Methanosarcina mazei (strain ATCC

Query: 1 NLRELLFSH 9
N++EL+ SH
Sbjct: 21 NIKELIQSH 29


>sp|RL10_METAC|LARGE ribosomal subunit protein uL10|Methanosarcina acetivorans (strain

Query: 1 NLRELLFSH 9
N++EL+ SH
Sbjct: 21 NIKELIQSH 29


>sp|Y772_ARCFU|UNCHARACTERIZED protein AF_0772|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NLRELLFSHN 10
++RE L SHN
Sbjct: 192 SIREFLRSHN 201




246|Sequence|1226|1235|LFSHNQISIL

>sp|RL6_METST|LARGE ribosomal subunit protein uL6|Methanosphaera stadtmanae (strain

Query: 2 FSHNQISI 9
F+HN+I+I
Sbjct: 39 FNHNKITI 46


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 3 SHNQISIL 10
+H+QIS+L
Sbjct: 133 AHDQISVL 140


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FSHNQISIL 10
F+HNQ+ L
Sbjct: 368 FAHNQVLAL 376


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FSHNQISIL 10
F+HNQ+ L
Sbjct: 364 FAHNQVLAL 372


>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 FSHNQISIL 10
SHN+I I+
Sbjct: 253 LSHNEIEII 261




247|Sequence|1231|1240|QISILDLSEK

>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing]

Query: 1 QISILDLSEK 10
+++ILDLSEK
Sbjct: 52 RLAILDLSEK 61


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 2 ISILDLSEK 10
++++DLSEK
Sbjct: 18 MAVVDLSEK 26




248|Sequence|1236|1245|DLSEKAYLWS

>sp|Y798_METJA|TPR repeat-containing protein MJ0798|Methanocaldococcus jannaschii

Query: 1 DLSEKAYLWS 10
+L +KAYLW
Sbjct: 107 NLGDKAYLWK 116


>sp|RL7A_AERPE|LARGE ribosomal subunit protein eL8|Aeropyrum pernix (strain ATCC

Query: 1 DLSEKAY 7
DL+EKAY
Sbjct: 14 DLAEKAY 20


>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DLSEKAYLW 9
D+ K Y+W
Sbjct: 200 DICPKGYIW 208


>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 1 DLSEKAYLW 9
D+ K Y+W
Sbjct: 200 DICPKGYIW 208


>sp|Y1847_ARCFU|UNCHARACTERIZED protein AF_1847|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLSEKAYLWS 10
D+SE +WS
Sbjct: 41 DVSESELVWS 50


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 1 DLSEKAYLW 9
D+ K Y+W
Sbjct: 200 DICPKGYIW 208


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 1 DLSEKAYLW 9
D+ K Y+W
Sbjct: 200 DICPKGYIW 208


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 LSEKAYLW 9
LSE Y+W
Sbjct: 61 LSEDEYIW 68


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 1 DLSEKAYLW 9
++SE Y+W
Sbjct: 219 EISEALYMW 227


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DLSEKAYLWS 10
+L EKAY W+
Sbjct: 423 ELLEKAYKWA 432


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain DSM

Query: 1 DLSEKAYLW 9
DL++ Y+W
Sbjct: 207 DLADAYYIW 215


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DLSEKAYLWS 10
D+S+ LWS
Sbjct: 765 DISQSITLWS 774




249|Sequence|1241|1250|AYLWSRVEKL

>sp|Y1382_METTH|UNCHARACTERIZED transporter MTH_1382|Methanothermobacter thermautotrophicus

Query: 1 AYLWSR 6
AYLW+R
Sbjct: 83 AYLWAR 88


>sp|COABC_THEKO|COENZYME A biosynthesis bifunctional protein|Thermococcus kodakarensis

Query: 3 LWSRVEKL 10
LW +EK+
Sbjct: 395 LWDEIEKM 402


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AYLWSRVEKL 10
AYL R EKL
Sbjct: 217 AYLKKRCEKL 226




250|Sequence|1246|1255|RVEKLHLSHN

>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 1 RVEKLHLSHN 10
RVEK+ SH+
Sbjct: 68 RVEKVEFSHH 77


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 3 EKLHLSHN 10
+KLH+SH+
Sbjct: 354 QKLHISHS 361


>sp|Y7SR_METFE|UNCHARACTERIZED 28.5 kDa protein in|Methanothermus fervidus

Query: 2 VEKLHLSHN 10
+EK LSHN
Sbjct: 224 IEKFILSHN 232


>sp|LYSK_PYRHO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus horikoshii

Query: 1 RVEKLHLS 8
RVEK+H S
Sbjct: 161 RVEKVHSS 168


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 EKLHLSHN 10
+KLH++H+
Sbjct: 380 DKLHIAHH 387


>sp|RNZ_THEGJ|RIBONUCLEASE Z|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RVEKLHLSH 9
RVEK+ ++H
Sbjct: 53 RVEKIFITH 61


>sp|RL10E_METST|LARGE ribosomal subunit protein uL16|Methanosphaera stadtmanae (strain

Query: 3 EKLHLSHN 10
E HLSHN
Sbjct: 41 EHTHLSHN 48




251|Sequence|1251|1260|HLSHNKLKEI

>sp|KAE1_IGNH4|TRNA N6-adenosine threonylcarbamoyltransferase|Ignicoccus hospitalis

Query: 2 LSHNKLKEI 10
L+H+KLKE+
Sbjct: 244 LAHSKLKEV 252


>sp|TRPF_THEVO|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HLSHNKLKEI 10
H SHN ++EI
Sbjct: 36 HASHNTIREI 45


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 HNKLKEI 10
HNK+KEI
Sbjct: 249 HNKVKEI 255


>sp|PUR7_ARCFU|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 HLSHNKLKEI 10
+LSH++ KEI
Sbjct: 174 YLSHSEAKEI 183


>sp|RL10E_METST|LARGE ribosomal subunit protein uL16|Methanosphaera stadtmanae (strain

Query: 1 HLSHNKLK 8
HLSHN L+
Sbjct: 44 HLSHNSLE 51


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 4 HNKLKEI 10
H KLKE+
Sbjct: 156 HGKLKEV 162


>sp|RL22_NATPD|LARGE ribosomal subunit protein uL22|Natronomonas pharaonis (strain

Query: 1 HLSHNKLKEI 10
H+SH KEI
Sbjct: 23 HMSHKHSKEI 32




252|Sequence|1256|1265|KLKEIPPEIG

>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LKEIPPEI 9
L+EIPPE+
Sbjct: 362 LREIPPEV 369


>sp|THIE_METVS|THIAMINE-PHOSPHATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KLKEIPPEI 9
K+KEI PE+
Sbjct: 93 KIKEIAPEL 101


>sp|IF2A_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 5 IPPEIG 10
IPPEIG
Sbjct: 198 IPPEIG 203


>sp|GCSPA_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 KLKEIPPEI 9
+L +IPPE+
Sbjct: 28 ELFDIPPEV 36


>sp|GCSPA_HALS3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 KLKEIPPEI 9
+L +IPPE+
Sbjct: 28 ELFDIPPEV 36


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 LKEIPPE 8
++E+PPE
Sbjct: 462 IQEVPPE 468


>sp|Y057_METKA|UPF0215 protein MK0057|Methanopyrus kandleri (strain AV19 /

Query: 1 KLKEIPPEI 9
KL+E+ PEI
Sbjct: 2 KLREVKPEI 10


>sp|RL24E_SULTO|LARGE ribosomal subunit protein eL24|Sulfurisphaera tokodaii (strain

Query: 3 KEIPPEIG 10
KEIPP G
Sbjct: 12 KEIPPATG 19


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 2 LKEIPPEI 9
+ EIPPE+
Sbjct: 185 IPEIPPEV 192


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LKEIPPEIG 10
LK+I P++G
Sbjct: 222 LKDIKPQVG 230


>sp|TRMBR_THELN|HTH-TYPE sugar sensing transcriptional regulator|Thermococcus litoralis

Query: 4 EIPPEIG 10
EIPPEI
Sbjct: 2 EIPPEIS 8


>sp|TRMBR_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus

Query: 4 EIPPEIG 10
EIPPEI
Sbjct: 2 EIPPEIS 8


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 3 KEIPPEI 9
KE+PPE+
Sbjct: 290 KEVPPEL 296


>sp|Y896_ARCFU|UNCHARACTERIZED protein AF_0896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLKEIPPEI 9
K KEIPP +
Sbjct: 103 KTKEIPPTL 111


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 4 EIPPEIG 10
EIPPE+
Sbjct: 187 EIPPEVS 193


>sp|KPTA_THEAC|PROBABLE RNA 2'-phosphotransferase|Thermoplasma acidophilum (strain ATCC

Query: 3 KEIPPE 8
+EIPPE
Sbjct: 199 REIPPE 204




253|Sequence|1261|1270|PPEIGCLENL

>sp|DNAG_NATPD|DNA primase DnaG|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PPEIGCLENL 10
PP+ C+E+L
Sbjct: 239 PPDGKCVEDL 248


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain

Query: 4 IGCLEN 9
IGC+EN
Sbjct: 20 IGCIEN 25


>sp|Y855_METJA|UNCHARACTERIZED protein MJ0855|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GCLENL 10
GCLEN+
Sbjct: 190 GCLENM 195


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 4 IGCLENL 10
I C+ENL
Sbjct: 229 IACIENL 235


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 4 IGCLENL 10
I C+ENL
Sbjct: 229 IACIENL 235


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 4 IGCLENL 10
I C+ENL
Sbjct: 229 IACIENL 235


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 IGCLENL 10
I C+ENL
Sbjct: 229 IACIENL 235


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 IGCLENL 10
I C+ENL
Sbjct: 229 IACIENL 235


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 IGCLENL 10
I C+ENL
Sbjct: 229 IACIENL 235


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 IGCLENL 10
I C+ENL
Sbjct: 229 IACIENL 235


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 IGCLENL 10
I C+ENL
Sbjct: 229 IACIENL 235


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 IGCLENL 10
I C+ENL
Sbjct: 229 IACIENL 235


>sp|DPCKG_METS3|GTP-DEPENDENT dephospho-CoA kinase|Methanobrevibacter smithii (strain ATCC

Query: 2 PEIGCLENL 10
P+IG ++NL
Sbjct: 58 PDIGIIDNL 66


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 1 PPEIGCLE 8
PP+ C+E
Sbjct: 26 PPQAACVE 33


>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 1 PPEIGCLENL 10
P E GCL+ L
Sbjct: 170 PDEQGCLDLL 179




254|Sequence|1266|1275|CLENLTSLDV

>sp|GLYA_ARCFU|SERINE hydroxymethyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 3 ENLTSLDV 10
ENLTSL V
Sbjct: 44 ENLTSLSV 51


>sp|Y855_METJA|UNCHARACTERIZED protein MJ0855|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CLENLTS 7
CLEN+T+
Sbjct: 191 CLENMTN 197


>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ENLTSLDV 10
EN+T +DV
Sbjct: 118 ENITGMDV 125


>sp|Y587_METJA|UNCHARACTERIZED protein MJ0587|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CLENLTSLD 9
C+ENLT D
Sbjct: 69 CMENLTIYD 77


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 2 LENLTSLDV 10
L+N T LDV
Sbjct: 738 LDNATELDV 746




255|Sequence|1271|1280|TSLDVSYNLE

>sp|Y1452_METJA|UNCHARACTERIZED protein MJ1452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LDVSYNLE 10
++VSYN+E
Sbjct: 183 IEVSYNIE 190


>sp|SYFB_METLZ|PHENYLALANINE--TRNA ligase beta subunit|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TSLDVSYNL 9
TS DVSY+L
Sbjct: 381 TSGDVSYSL 389


>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter thermautotrophicus

Query: 3 LDVSYNLE 10
+D+ YN+E
Sbjct: 133 IDIGYNVE 140




256|Sequence|1276|1285|SYNLELRSFP

>sp|RL10E_HALSA|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain

Query: 1 SYNLELRSFP 10
+Y ++LR FP
Sbjct: 84 NYKMQLRKFP 93


>sp|RL10E_HALS3|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain

Query: 1 SYNLELRSFP 10
+Y ++LR FP
Sbjct: 84 NYKMQLRKFP 93


>sp|RL10E_METHJ|LARGE ribosomal subunit protein uL16|Methanospirillum hungatei JF-1

Query: 1 SYNLELRSFP 10
+Y+L+LR++P
Sbjct: 81 NYHLKLRTYP 90


>sp|RL10E_ARCFU|LARGE ribosomal subunit protein uL16|Archaeoglobus fulgidus (strain

Query: 1 SYNLELRSFP 10
+Y L+LR FP
Sbjct: 80 NYKLKLRIFP 89


>sp|MV3K_PICTO|MEVALONATE-3-KINASE torridus (strain ATCC 700027

Query: 1 SYNLELRSFP 10
+YN++ R+FP
Sbjct: 3 NYNVKTRAFP 12


>sp|TYW2_PYRHO|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 1 SYNLELRSFP 10
+YN++ R FP
Sbjct: 179 AYNMDNRDFP 188


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 ELRSFP 10
ELRSFP
Sbjct: 271 ELRSFP 276


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 5 ELRSFP 10
ELRSFP
Sbjct: 270 ELRSFP 275


>sp|PURO_META3|IMP cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SYNLELRSFP 10
SY + RSFP
Sbjct: 20 SYRVSSRSFP 29


>sp|PURO_METST|IMP cyclohydrolase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SYNLELRSFP 10
SY + RSFP
Sbjct: 19 SYRVSSRSFP 28


>sp|RL10E_METST|LARGE ribosomal subunit protein uL16|Methanosphaera stadtmanae (strain

Query: 2 YNLELRSFP 10
Y L++R++P
Sbjct: 70 YRLKIRTYP 78


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SYNLELRSFP 10
SY+LE FP
Sbjct: 228 SYSLENHKFP 237


>sp|PSB1_PYRIL|PROTEASOME subunit beta 1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SYNLELRSFP 10
SY LE+R P
Sbjct: 73 SYELEVRKKP 82


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SYNLEL 6
SYNLEL
Sbjct: 94 SYNLEL 99


>sp|SURE_PICTO|5'-NUCLEOTIDASE SurE|Picrophilus torridus (strain ATCC 700027

Query: 1 SYNLELRSF 9
+YN+ LR+F
Sbjct: 45 TYNVPLRAF 53




257|Sequence|1281|1290|LRSFPNEMGK

>sp|PURO_METM5|IMP cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 2 RSFPNEMGK 10
RSFPN + K
Sbjct: 26 RSFPNRLAK 34


>sp|PURO_METMP|IMP cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RSFPNEMGK 10
RSFPN + K
Sbjct: 26 RSFPNRVAK 34


>sp|PURO_METM7|IMP cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 2 RSFPNEMGK 10
RSFPN + K
Sbjct: 26 RSFPNRVAK 34


>sp|PURO_METM6|IMP cyclohydrolase|Methanococcus maripaludis (strain C6 /

Query: 2 RSFPNEMGK 10
RSFPN + K
Sbjct: 26 RSFPNRVAK 34


>sp|PURO_METVS|IMP cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 2 RSFPNEMGK 10
RSFPN + K
Sbjct: 26 RSFPNRIAK 34


>sp|RS17E_METAR|SMALL ribosomal subunit protein eS17|Methanocella arvoryzae (strain DSM

Query: 1 LRSFPNEMG 9
LR +PNE G
Sbjct: 17 LRQYPNEFG 25


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LRSFPNE 7
LRSFP+E
Sbjct: 46 LRSFPSE 52


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LRSFPNE 7
LRSFP+E
Sbjct: 46 LRSFPSE 52


>sp|PURO_METJA|IMP cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RSFPNEMGK 10
RSFPN K
Sbjct: 26 RSFPNREAK 34


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 2 RSFPNEMG 9
R+FP MG
Sbjct: 381 RNFPGRMG 388


>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 2 RSFPNEMG 9
R+FP MG
Sbjct: 364 RNFPGRMG 371


>sp|YPV8_METTF|UNCHARACTERIZED protein ORF8|Methanothermobacter thermautotrophicus

Query: 4 FPNEMGK 10
FP E+GK
Sbjct: 24 FPQELGK 30


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 4 FPNEMGK 10
FP E+GK
Sbjct: 24 FPQELGK 30




258|Sequence|1286|1295|NEMGKLSKIW

>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 2 EMGKLSKIW 10
E+G+L IW
Sbjct: 182 ELGELKGIW 190


>sp|GUAAB_METKA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanopyrus kandleri

Query: 4 GKLSKIW 10
GK+SK W
Sbjct: 228 GKMSKPW 234


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NEMGKLSK 8
N++GK+SK
Sbjct: 330 NDIGKISK 337




259|Sequence|1291|1300|LSKIWDLPLD

>sp|RL3_METB6|LARGE ribosomal subunit protein uL3|Methanoregula boonei (strain DSM

Query: 1 LSKIWDLPLD 10
L++IW PLD
Sbjct: 98 LTEIWAEPLD 107


>sp|FAEHP_METBU|BIFUNCTIONAL enzyme Fae/Hps|Methanococcoides burtonii (strain DSM 6242

Query: 1 LSKIWDLP 8
+SK+WD P
Sbjct: 166 ISKLWDAP 173


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 KIWDLPLD 10
+IW+LP D
Sbjct: 1443 EIWNLPWD 1450


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 3 KIWDLPLD 10
K+W PLD
Sbjct: 208 KVWSNPLD 215


>sp|HEM3_HYPBU|PROBABLE porphobilinogen deaminase|Hyperthermus butylicus (strain DSM 5456

Query: 4 IWDLP 8
IWDLP
Sbjct: 115 IWDLP 119


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 3 KIWDLPLD 10
KIW +P++
Sbjct: 395 KIWRMPME 402


>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 4 IWDLP 8
+WDLP
Sbjct: 99 VWDLP 103


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 3 KIWDLPLD 10
K++DLPL+
Sbjct: 371 KVFDLPLE 378


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WDLPLD 10
WD+PL+
Sbjct: 656 WDIPLN 661


>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSKIWDLPLD 10
L +I+D+PL+
Sbjct: 441 LHEIYDIPLN 450


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IWDLPLD 10
+W+LP D
Sbjct: 12 VWELPKD 18


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 4 IWDLPLD 10
+W+LP D
Sbjct: 15 VWELPED 21


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 1 LSKIWDLP 8
++++WD P
Sbjct: 166 ITRLWDAP 173


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WDLPLD 10
W++PLD
Sbjct: 243 WNIPLD 248


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 4 IWDLP 8
+WDLP
Sbjct: 343 VWDLP 347


>sp|RNP1_PYRFU|RIBONUCLEASE P protein component 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SKIWDLPLD 10
+K+W +P D
Sbjct: 84 NKVWKVPKD 92


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SKIWDLPLD 10
SK+ +LP+D
Sbjct: 343 SKVAELPID 351


>sp|RNP1_PYRAB|RIBONUCLEASE P protein component 1|Pyrococcus abyssi (strain GE5 /

Query: 3 KIWDLPLD 10
K+W +P D
Sbjct: 84 KVWKVPKD 91




260|Sequence|1296|1305|DLPLDELHLN

>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 2 LPLDELH 8
LP DELH
Sbjct: 589 LPTDELH 595


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 1 DLPLDEL 7
D+PLDEL
Sbjct: 368 DMPLDEL 374


>sp|TRPA_METVO|TRYPTOPHAN synthase alpha chain|Methanococcus voltae

Query: 1 DLPLDE 6
DLPLDE
Sbjct: 135 DLPLDE 140


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLPLDEL 7
D+PLDEL
Sbjct: 389 DVPLDEL 395


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DLPLDEL 7
D+PLDEL
Sbjct: 389 DVPLDEL 395


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 3 PLDELHL 9
P DELH+
Sbjct: 110 PFDELHV 116


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLPLDELHL 9
D+PL+EL L
Sbjct: 408 DVPLEELKL 416


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DLPLDEL 7
D+P+DEL
Sbjct: 108 DVPIDEL 114


>sp|HEM1_AERPE|GLUTAMYL-TRNA reductase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LPLDEL 7
LPLDEL
Sbjct: 224 LPLDEL 229


>sp|IF2P_THEVO|PROBABLE translation initiation factor IF-2|Thermoplasma volcanium (strain

Query: 1 DLPLDE 6
D+PLDE
Sbjct: 347 DIPLDE 352


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DLPLDELHLN 10
+LP DE LN
Sbjct: 11 ELPFDEYVLN 20


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 1 DLPLDE 6
DLP+DE
Sbjct: 164 DLPIDE 169


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LPLDELHLN 10
+PLDE+ N
Sbjct: 269 IPLDEIKTN 277


>sp|COBD_THEKO|PROBABLE cobalamin biosynthesis protein CobD|Thermococcus kodakarensis

Query: 4 LDELHLN 10
LDE HLN
Sbjct: 126 LDEAHLN 132


>sp|DAPA_METMJ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LPLDEL 7
LPLDEL
Sbjct: 270 LPLDEL 275


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DLPLDEL 7
D PLDEL
Sbjct: 392 DAPLDEL 398


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DLPLDEL 7
D PLDEL
Sbjct: 392 DAPLDEL 398


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 1 DLPLDEL 7
D PLDEL
Sbjct: 16 DYPLDEL 22


>sp|MOAA_METS5|PROBABLE GTP 3',8-cyclase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DLPLDELHL 9
++ +DELHL
Sbjct: 174 EIGIDELHL 182


>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 2 LPLDELHL 9
+P+DE+H
Sbjct: 111 IPVDEVHF 118


>sp|DAPA_METPE|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LPLDEL 7
LPLDEL
Sbjct: 270 LPLDEL 275


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DLPLDEL 7
D PLDEL
Sbjct: 391 DAPLDEL 397


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DLPLDEL 7
D PLDEL
Sbjct: 393 DAPLDEL 399




261|Sequence|1301|1310|ELHLNFDFKH

>sp|RL6_PICTO|LARGE ribosomal subunit protein uL6|Picrophilus torridus (strain ATCC

Query: 1 ELHLNFDFKH 10
E H+ DF H
Sbjct: 86 EYHMKIDFTH 95


>sp|LYSK_SACI7|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 NFDFKH 10
NF+FKH
Sbjct: 136 NFNFKH 141


>sp|LYSK_SACI6|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 NFDFKH 10
NF+FKH
Sbjct: 136 NFNFKH 141


>sp|LYSK_SACI4|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 NFDFKH 10
NF+FKH
Sbjct: 136 NFNFKH 141


>sp|LYSK_SACI3|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 NFDFKH 10
NF+FKH
Sbjct: 136 NFNFKH 141


>sp|LYSK_SACI2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 NFDFKH 10
NF+FKH
Sbjct: 136 NFNFKH 141


>sp|LYSK_SACI1|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 NFDFKH 10
NF+FKH
Sbjct: 136 NFNFKH 141


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ELHLNFDFKH 10
E+ L+FDFK+
Sbjct: 8 EIFLDFDFKN 17


>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LHLNFDFK 9
+HLNF F+
Sbjct: 168 VHLNFPFR 175


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 3 HLNFDFK 9
LNFDFK
Sbjct: 214 QLNFDFK 220


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5

Query: 3 HLNFDFK 9
HLN+D++
Sbjct: 74 HLNYDYQ 80


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ELHLNFDFKH 10
++H+N+D H
Sbjct: 202 DMHINYDAAH 211


>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 2 LHLNFDFKH 10
+H+N+D H
Sbjct: 204 MHINYDGAH 212


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 ELHLNFDFKH 10
E+H D KH
Sbjct: 14 EIHQQLDTKH 23


>sp|DPHB_METMP|DIPHTHINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 LNFDFK 9
LN+DFK
Sbjct: 223 LNYDFK 228




262|Sequence|1306|1315|FDFKHIGCKA

>sp|RS2_PYRAR|SMALL ribosomal subunit protein uS2|Pyrobaculum arsenaticum (strain DSM

Query: 4 KHIGCKA 10
K++GCKA
Sbjct: 91 KYVGCKA 97


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DFKHIG 7
DFKH+G
Sbjct: 148 DFKHLG 153


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DFKHIG 7
DFKH+G
Sbjct: 148 DFKHLG 153


>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 KHIGCKA 10
KH GC+A
Sbjct: 333 KHSGCRA 339


>sp|LYSK_SACI7|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FDFKHI 6
F+FKHI
Sbjct: 137 FNFKHI 142


>sp|LYSK_SACI6|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FDFKHI 6
F+FKHI
Sbjct: 137 FNFKHI 142


>sp|LYSK_SACI4|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FDFKHI 6
F+FKHI
Sbjct: 137 FNFKHI 142


>sp|LYSK_SACI3|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FDFKHI 6
F+FKHI
Sbjct: 137 FNFKHI 142


>sp|LYSK_SACI2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FDFKHI 6
F+FKHI
Sbjct: 137 FNFKHI 142


>sp|LYSK_SACI1|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FDFKHI 6
F+FKHI
Sbjct: 137 FNFKHI 142


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KHIGCKA 10
KH GC+A
Sbjct: 347 KHSGCRA 353


>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 FKHIGC 8
F H+GC
Sbjct: 39 FSHLGC 44


>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FDFKHIGC 8
DF+ +GC
Sbjct: 441 LDFEKVGC 448


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FDFKHIGC 8
DF+ +GC
Sbjct: 441 LDFEKVGC 448


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 FDFKHIGC 8
DF+ +GC
Sbjct: 441 LDFEKVGC 448


>sp|SYR_METM6|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 FDFKHIGC 8
DF+ +GC
Sbjct: 441 LDFEKVGC 448


>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 FDFKHIGC 8
DF+ +GC
Sbjct: 441 LDFEKVGC 448


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDFKHIGC 8
DF+ +GC
Sbjct: 438 LDFEKVGC 445


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 FDFKHIG 7
+D+ HIG
Sbjct: 35 YDYNHIG 41


>sp|SYC_ARCFU|CYSTEINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FDFKHIG 7
+D+ HIG
Sbjct: 33 YDYSHIG 39


>sp|RS2_HYPBU|SMALL ribosomal subunit protein uS2|Hyperthermus butylicus (strain DSM

Query: 5 HIGCKA 10
+IGCKA
Sbjct: 100 YIGCKA 105




263|Sequence|1311|1320|IGCKAKDIIR

>sp|FRHD_METTH|COENZYME F420 hydrogenase subunit delta|Methanothermobacter

Query: 1 IGCKAKDI 8
IGCK K+I
Sbjct: 119 IGCKPKEI 126


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGCKAKDIIR 10
I C+ DIIR
Sbjct: 321 ISCRYSDIIR 330


>sp|PGK1_METAC|PHOSPHOGLYCERATE kinase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GCKAKDIIR 10
G KAKDI++
Sbjct: 206 GTKAKDIVK 214


>sp|RADB_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 IGCKAKDIIR 10
+G K KDI+R
Sbjct: 175 LGYKTKDILR 184


>sp|RADB_THESM|DNA repair and recombination protein|Thermococcus sibiricus (strain DSM

Query: 1 IGCKAKDIIR 10
+G K KDI+R
Sbjct: 172 MGYKCKDILR 181


>sp|GVPN1_HALSA|GAS vesicle ATPase GvpN1|Halobacterium salinarum (strain ATCC 700922

Query: 4 KAKDIIR 10
K+KDIIR
Sbjct: 148 KSKDIIR 154


>sp|RPO5_HYPBU|DNA-DIRECTED RNA polymerase subunit Rpo5|Hyperthermus butylicus (strain DSM

Query: 1 IGCKAKDIIR 10
IG K DI+R
Sbjct: 54 IGAKPGDIVR 63


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 CKAKDII 9
C AKD+I
Sbjct: 608 CSAKDLI 614


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 CKAKDII 9
C AKD+I
Sbjct: 608 CSAKDLI 614


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CKAKDII 9
C AKD+I
Sbjct: 608 CSAKDLI 614


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 CKAKDII 9
C AKD+I
Sbjct: 602 CSAKDLI 608


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 CKAKDII 9
C AKD+I
Sbjct: 605 CSAKDLI 611


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 CKAKDII 9
C AKD+I
Sbjct: 605 CSAKDLI 611


>sp|RADB_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 IGCKAKDIIR 10
+G + KDI+R
Sbjct: 181 LGYRTKDILR 190


>sp|RADB_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 IGCKAKDIIR 10
+G + KDI+R
Sbjct: 171 LGYRTKDILR 180


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 CKAKDII 9
C AKD+I
Sbjct: 605 CSAKDLI 611


>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GCKAKDI 8
GC+ KD+
Sbjct: 41 GCRIKDV 47


>sp|RADB_THEON|DNA repair and recombination protein|Thermococcus onnurineus (strain

Query: 1 IGCKAKDIIR 10
+G + KDI+R
Sbjct: 172 LGYRCKDILR 181


>sp|RADB_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 1 IGCKAKDIIR 10
+G + KDI+R
Sbjct: 172 LGYRCKDILR 181


>sp|RADB_THEGJ|DNA repair and recombination protein|Thermococcus gammatolerans (strain

Query: 1 IGCKAKDIIR 10
+G + KDI+R
Sbjct: 172 LGYRCKDILR 181


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CKAKDII 9
C AKD+I
Sbjct: 591 CSAKDLI 597


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 4 KAKDIIR 10
KAKD+IR
Sbjct: 120 KAKDLIR 126


>sp|G3P_METB6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoregula boonei (strain DSM 21154

Query: 3 CKAKDII 9
CKA D+I
Sbjct: 76 CKAADVI 82




264|Sequence|1316|1325|KDIIRFLQQR

>sp|Y207_METJA|UNCHARACTERIZED protein MJ0207|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KDIIRFLQQ 9
KDI RFL Q
Sbjct: 67 KDIERFLNQ 75


>sp|PYRD_NATPD|DIHYDROOROTATE dehydrogenase (quinone)|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DIIRFLQQR 10
DI+RF+ +R
Sbjct: 273 DIVRFIAKR 281


>sp|PURQ_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DIIRFLQQR 10
D+IRF +QR
Sbjct: 44 DMIRFEEQR 52


>sp|Y1095_ARCFU|PUTATIVE antitoxin AF_1095|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KDIIRFLQQR 10
KDI +FL++R
Sbjct: 52 KDIEKFLEER 61


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 1 KDIIRFL 7
KD+IRF+
Sbjct: 303 KDVIRFV 309


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KDIIRFLQQ 9
KDII FL++
Sbjct: 748 KDIIDFLEK 756


>sp|PRIL_METBF|DNA primase large subunit PriL|Methanosarcina barkeri (strain Fusaro /

Query: 1 KDIIRFLQQ 9
KD +R LQ+
Sbjct: 165 KDFVRLLQE 173




265|Sequence|1321|1330|FLQQRLKKAV

>sp|ENO_SULTO|ENOLASE tokodaii (strain DSM 16993

Query: 2 LQQRLKKAV 10
LQQ+LKK +
Sbjct: 294 LQQKLKKTI 302


>sp|LRPA1_HALS3|HTH-TYPE transcriptional regulator LrpA1|Halobacterium salinarum (strain

Query: 1 FLQQRLK 7
FLQ+RLK
Sbjct: 136 FLQERLK 142


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LQQRLKKA 9
+Q+RLKKA
Sbjct: 315 VQERLKKA 322


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro

Query: 2 LQQRLKKAV 10
L+ RLKKA+
Sbjct: 17 LEARLKKAI 25


>sp|RS3_ARCFU|SMALL ribosomal subunit protein uS3|Archaeoglobus fulgidus (strain ATCC

Query: 1 FLQQRLKK 8
F+Q+RLKK
Sbjct: 7 FVQERLKK 14


>sp|Y1098_METJA|UNCHARACTERIZED protein MJ1098|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLQQRLK 7
FLQQ+LK
Sbjct: 188 FLQQKLK 194




266|Sequence|1326|1335|LKKAVPYNRM

>sp|RL22_METLZ|LARGE ribosomal subunit protein uL22|Methanocorpusculum labreanum

Query: 1 LKKAVPYNRM 10
LK+AVP++R
Sbjct: 55 LKRAVPFHRF 64


>sp|RL22_METMJ|LARGE ribosomal subunit protein uL22|Methanoculleus marisnigri (strain

Query: 1 LKKAVPYNRM 10
LKKA+P+ R
Sbjct: 55 LKKAIPFKRF 64


>sp|TRMBR_THELN|HTH-TYPE sugar sensing transcriptional regulator|Thermococcus litoralis

Query: 2 KKAVPYNRM 10
K +PYNR+
Sbjct: 41 KSGIPYNRV 49


>sp|TRMBR_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus

Query: 2 KKAVPYNRM 10
K +PYNR+
Sbjct: 41 KSGIPYNRV 49


>sp|RL22_METTP|LARGE ribosomal subunit protein uL22|Methanothrix thermoacetophila

Query: 1 LKKAVPYNR 9
LK+AVP+ R
Sbjct: 54 LKRAVPFRR 62


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 1 LKKAVPYNRM 10
+++ +PY+RM
Sbjct: 402 IQEEIPYSRM 411


>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KAVPYNR 9
K+VP+NR
Sbjct: 45 KSVPFNR 51


>sp|Y33A_METJA|UNCHARACTERIZED protein MJ0332.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KKAVPY 7
KKAVPY
Sbjct: 59 KKAVPY 64


>sp|QUEC_METBU|7-CYANO-7-DEAZAGUANINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LKKAVPYNRM 10
+KK + Y+RM
Sbjct: 39 VKKEIEYSRM 48


>sp|RL22_METS3|LARGE ribosomal subunit protein uL22|Methanobrevibacter smithii (strain

Query: 1 LKKAVPYNR 9
+KK+VP+ R
Sbjct: 56 MKKSVPFKR 64


>sp|RL22_METB6|LARGE ribosomal subunit protein uL22|Methanoregula boonei (strain DSM

Query: 1 LKKAVPY 7
LKKA+P+
Sbjct: 55 LKKAIPF 61


>sp|RL22_ARCFU|LARGE ribosomal subunit protein uL22|Archaeoglobus fulgidus (strain

Query: 1 LKKAVPYNR 9
+K+A+P+ R
Sbjct: 58 MKRAIPFKR 66


>sp|TRUD_METBU|PROBABLE tRNA pseudouridine synthase D|Methanococcoides burtonii (strain DSM

Query: 1 LKKAVPYNR 9
+KK +P NR
Sbjct: 287 IKKGLPLNR 295




267|Sequence|1331|1340|PYNRMKLMIV

>sp|FOLD_METAC|BIFUNCTIONAL protein FolD|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PYNRMKLMI 9
PYN KLMI
Sbjct: 133 PYNMGKLMI 141


>sp|FOLD_METBF|BIFUNCTIONAL protein FolD|Methanosarcina barkeri (strain Fusaro /

Query: 1 PYNRMKLMI 9
PYN KLMI
Sbjct: 130 PYNMGKLMI 138


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PYNRMKLMI 9
PYN KLMI
Sbjct: 130 PYNMGKLMI 138


>sp|RL1_METVO|LARGE ribosomal subunit protein uL1|Methanococcus voltae

Query: 1 PYNRMKLMIV 10
P NRMK IV
Sbjct: 40 PENRMKQQIV 49


>sp|RS9_METJA|SMALL ribosomal subunit protein uS9|Methanocaldococcus jannaschii

Query: 2 YNRMKLM 8
Y RMKLM
Sbjct: 41 YKRMKLM 47




268|Sequence|1336|1345|KLMIVGNTGS

>sp|CDC62_SULAC|ORC1-TYPE DNA replication protein 2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KLMIVGNTGS 10
+L+I+G TG+
Sbjct: 60 RLVIIGRTGT 69


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KLMIVGNTGS 10
K++I+GNT +
Sbjct: 81 KVLIIGNTNA 90


>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 MIVGNTGS 10
M+VGNT S
Sbjct: 182 MLVGNTSS 189


>sp|DHQS_METHJ|3-DEHYDROQUINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 MIVGNTGS 10
M+VGNT S
Sbjct: 182 MLVGNTSS 189


>sp|IDI2_METTH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 MIVGNTGS 10
M++GN GS
Sbjct: 118 MLIGNIGS 125


>sp|COFD_HALSA|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 700922

Query: 4 IVGNTG 9
+VGNTG
Sbjct: 29 VVGNTG 34


>sp|COFD_HALS3|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 29341

Query: 4 IVGNTG 9
+VGNTG
Sbjct: 29 VVGNTG 34


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LMIVGNTGS 10
L ++GN GS
Sbjct: 478 LHVIGNVGS 486


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LMIVGNTGS 10
L ++GN GS
Sbjct: 478 LHVIGNVGS 486


>sp|DNLI_METMP|DNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LMIVGNTGS 10
L ++GN GS
Sbjct: 478 LHVIGNVGS 486


>sp|DHQS_METPE|3-DEHYDROQUINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 MIVGNTGS 10
M+VGNT S
Sbjct: 182 MLVGNTSS 189


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LMIVGNTGS 10
L ++GN GS
Sbjct: 478 LHVIGNVGS 486




269|Sequence|1341|1350|GNTGSGKTTL

>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNTGSGKTTL 10
G TGSGKTTL
Sbjct: 308 GGTGSGKTTL 317


>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 1 GNTGSGKTTL 10
G+ GSGKTTL
Sbjct: 30 GDIGSGKTTL 39


>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 7 GTAGSGKTTL 16


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 314 GKNGSGKTTL 323


Query: 1 GNTGSGKTTL 10
G +GSGK+TL
Sbjct: 38 GRSGSGKSTL 47


>sp|RFCS_METHJ|REPLICATION factor C small subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 GNTGSGKTT 9
GN G+GKTT
Sbjct: 46 GNAGTGKTT 54


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 1 GNTGSGKTTL 10
G+TGSGKT L
Sbjct: 194 GSTGSGKTDL 203


>sp|Y1893_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 314 GKNGSGKTTL 323


Query: 1 GNTGSGKTTL 10
G +GSGK+TL
Sbjct: 38 GRSGSGKSTL 47


>sp|HFLX_THEPD|GTPASE HflX|Thermofilum pendens (strain DSM 2475

Query: 1 GNTGSGKTTL 10
G TG+GKTTL
Sbjct: 200 GYTGAGKTTL 209


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GNTGSGKTTL 10
G +G+GKTTL
Sbjct: 325 GTSGAGKTTL 334


>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii

Query: 1 GNTGSGKTTL 10
G +GSGK+TL
Sbjct: 37 GKSGSGKSTL 46


Query: 1 GNTGSGKTTL 10
G+ GSGK+TL
Sbjct: 286 GDNGSGKSTL 295


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 29 GPNGSGKTTL 38


>sp|Y130_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 34 GPNGSGKTTL 43


>sp|RAD50_NANEQ|DNA double-strand break repair Rad50|Nanoarchaeum equitans (strain

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 31 GPNGSGKTTL 40


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GNTGSGKTTL 10
G+ G+GKTTL
Sbjct: 350 GHNGAGKTTL 359


Query: 1 GNTGSGKTTL 10
G +G GK+TL
Sbjct: 45 GPSGCGKSTL 54


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GNTGSGKTTL 10
G+ G+GKTTL
Sbjct: 352 GHNGAGKTTL 361


Query: 1 GNTGSGKTTL 10
G +G GK+TL
Sbjct: 45 GPSGCGKSTL 54


>sp|CDC6A_HALSA|ORC1-TYPE DNA replication protein 10|Halobacterium salinarum (strain ATCC

Query: 1 GNTGSGKTTL 10
GNTG GKT +
Sbjct: 59 GNTGVGKTAV 68


>sp|Y068_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 34 GPNGSGKTTL 43


>sp|Y4021_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GNTGSGKTTL 10
G+ GSGK+TL
Sbjct: 38 GSNGSGKSTL 47


>sp|Y731_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus

Query: 1 GNTGSGKTTL 10
G G+GKTTL
Sbjct: 34 GRNGAGKTTL 43


>sp|KCY_PYRNV|CYTIDYLATE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 8 GQPGSGKTTI 17


>sp|KCY_PYRAR|CYTIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 8 GQPGSGKTTI 17


>sp|KCY_PYRAE|CYTIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 8 GQPGSGKTTI 17


>sp|CYSC_ARCFU|PROBABLE adenylyl-sulfate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GNTGSGKTTL 10
G +G+GKTTL
Sbjct: 9 GPSGAGKTTL 18


>sp|Y132_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 34 GPNGSGKTTL 43


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 294 GENGSGKTTL 303


Query: 1 GNTGSGKTTL 10
G++ +GKTTL
Sbjct: 36 GHSAAGKTTL 45


>sp|CYSC_PYRAB|PROBABLE adenylyl-sulfate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 GNTGSGKTTL 10
G +G+GKTTL
Sbjct: 10 GPSGAGKTTL 19


>sp|PSTB_SACS2|PHOSPHATE import ATP-binding protein PstB|Saccharolobus solfataricus

Query: 1 GNTGSGKTTL 10
G +GSGK+TL
Sbjct: 43 GPSGSGKSTL 52


>sp|PSTB_PYRAE|PHOSPHATE import ATP-binding protein PstB|Pyrobaculum aerophilum (strain

Query: 1 GNTGSGKTTL 10
G +GSGK+TL
Sbjct: 36 GPSGSGKSTL 45


>sp|PSTB_AERPE|PHOSPHATE import ATP-binding protein PstB|Aeropyrum pernix (strain ATCC

Query: 1 GNTGSGKTTL 10
G +GSGK+TL
Sbjct: 38 GPSGSGKSTL 47


>sp|PHNC1_NATPD|PHOSPHONATES import ATP-binding protein PhnC|Natronomonas pharaonis (strain

Query: 1 GNTGSGKTTL 10
G +G+GKTTL
Sbjct: 34 GRSGAGKTTL 43


>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 1 GNTGSGKTTL 10
GNTG GKT +
Sbjct: 56 GNTGVGKTAV 65


>sp|KCY_PYRIL|CYTIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 8 GQPGSGKTTV 17


>sp|KCY_PYRCJ|CYTIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 8 GQPGSGKTTV 17


>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 290 GENGSGKTTL 299


Query: 1 GNTGSGKTTL 10
G++ +GKTTL
Sbjct: 36 GHSAAGKTTL 45


>sp|KTHY_PICTO|PROBABLE thymidylate kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 13 GIDGSGKTTL 22


>sp|KTHY1_SACS2|PROBABLE thymidylate kinase 1|Saccharolobus solfataricus (strain ATCC

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 9 GIDGSGKTTL 18


>sp|Y2317_HALSA|PUTATIVE ABC transporter ATP-binding protein|Halobacterium salinarum

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 34 GANGSGKTTL 43


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 TGSGKTTL 10
TGSGKTT
Sbjct: 107 TGSGKTTF 114


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 GNTGSGKTTL 10
G +G+GKTTL
Sbjct: 208 GLSGTGKTTL 217


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GNTGSGKTTL 10
G +G+GK+TL
Sbjct: 36 GKSGAGKSTL 45


>sp|XYLG_SULAC|XYLOSE/ARABINOSE import ATP-binding protein XylG|Sulfolobus acidocaldarius (strain

Query: 1 GNTGSGKTTL 10
G+ G+GK+TL
Sbjct: 37 GDNGAGKSTL 46


>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GNTGSGKTTL 10
G G+GKTTL
Sbjct: 38 GPNGAGKTTL 47


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 46 GPPGSGKTTL 55


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNTGSGKTT 9
G T SGKTT
Sbjct: 305 GETASGKTT 313


>sp|FLAI_SULAC|ARCHAEAL flagellar ATPase motor FlaI|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GNTGSGKTT 9
G T SGKTT
Sbjct: 262 GETASGKTT 270


>sp|WTPC_PYRHO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus horikoshii (strain

Query: 1 GNTGSGKTTL 10
G +GSGKT L
Sbjct: 33 GPSGSGKTVL 42


>sp|KCY_HALMA|CYTIDYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GNTGSGKTTL 10
G GSGK+TL
Sbjct: 7 GPAGSGKSTL 16


>sp|Y412_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GNTGSGKTTL 10
G +G GKTTL
Sbjct: 53 GPSGCGKTTL 62


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 46 GPPGSGKTTL 55


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 46 GPPGSGKTTL 55


>sp|GVPN1_HALSA|GAS vesicle ATPase GvpN1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GNTGSGKTTL 10
G TG GKT+L
Sbjct: 91 GPTGCGKTSL 100


>sp|LIVG_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 1 GNTGSGKTTL 10
G GSGK+TL
Sbjct: 40 GPNGSGKSTL 49


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GNTGSGKTTL 10
G GSGK+TL
Sbjct: 346 GTNGSGKSTL 355


Query: 1 GNTGSGKTTL 10
G TG GK+TL
Sbjct: 44 GPTGCGKSTL 53


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GNTGSGKTTL 10
G GSGK+TL
Sbjct: 35 GRNGSGKSTL 44


>sp|LIVG_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus

Query: 1 GNTGSGKTTL 10
G GSGKTT
Sbjct: 36 GPNGSGKTTF 45


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 1 GNTGSGKTTL 10
G G+GKTTL
Sbjct: 45 GPPGTGKTTL 54


>sp|KCY_METLZ|CYTIDYLATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GNTGSGKTTL 10
G+ GSG TTL
Sbjct: 7 GSPGSGTTTL 16


>sp|CDC6_PICTO|ORC1-TYPE DNA replication protein|Picrophilus torridus (strain ATCC 700027

Query: 1 GNTGSGKTT 9
G +GSGKT+
Sbjct: 61 GQSGSGKTS 69


>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 GNTGSGKTTL 10
G TG+GKT +
Sbjct: 60 GKTGTGKTAV 69


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 1 GNTGSGKTTL 10
G TG+GKT +
Sbjct: 59 GKTGTGKTAV 68


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC

Query: 1 GNTGSGKTTL 10
G TG+GKT +
Sbjct: 66 GKTGTGKTAV 75


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 1 GNTGSGKTTL 10
G TG+GKT +
Sbjct: 66 GKTGTGKTAV 75


>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GNTGSGKT 8
G TGSGKT
Sbjct: 286 GPTGSGKT 293


>sp|RAD50_SULAC|DNA double-strand break repair Rad50|Sulfolobus acidocaldarius

Query: 1 GNTGSGKTTL 10
GN G+GK+++
Sbjct: 30 GNNGAGKSSI 39


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GNTGSGKTTL 10
G GSGK+TL
Sbjct: 37 GQNGSGKSTL 46


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 46 GPPGSGKTTL 55


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GNTGSGKTTL 10
G GSGK+TL
Sbjct: 40 GPNGSGKSTL 49


>sp|Y1023_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GNTGSGKTT 9
G+ G+GKTT
Sbjct: 37 GHNGAGKTT 45


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GNTGSGKTTL 10
G GSGK+TL
Sbjct: 37 GQNGSGKSTL 46


>sp|NTPTH_SACS2|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GNTGSGKTTL 10
GN G GKTT+
Sbjct: 15 GNPGVGKTTI 24


>sp|Y870_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GNTGSGKTTL 10
G GSGK+TL
Sbjct: 371 GTNGSGKSTL 380


Query: 1 GNTGSGKTTL 10
G TG GK+TL
Sbjct: 44 GPTGCGKSTL 53


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 GNTGSGKTT 9
G+ G+GKTT
Sbjct: 46 GDPGTGKTT 54


>sp|UREG_SULTO|UREASE accessory protein UreG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GNTGSGKTTL 10
G GSGKTTL
Sbjct: 8 GPVGSGKTTL 17


>sp|RFCL_THEAC|REPLICATION factor C large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 GNTGSGKTT 9
G+ G+GKTT
Sbjct: 47 GSQGTGKTT 55


>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 3 TGSGKTT 9
TGSGKTT
Sbjct: 391 TGSGKTT 397


>sp|RADB_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 1 GNTGSGKTTL 10
G+ G+GKTTL
Sbjct: 31 GHGGTGKTTL 40


>sp|CDC6_THEON|ORC1-TYPE DNA replication protein|Thermococcus onnurineus (strain NA1)

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 65 GKTGTGKT 72


>sp|CDC6_THEKO|ORC1-TYPE DNA replication protein|Thermococcus kodakarensis (strain ATCC

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 65 GKTGTGKT 72


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 68 GKTGTGKT 75


>sp|CDC6_PYRFU|ORC1-TYPE DNA replication protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 69 GKTGTGKT 76


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 68 GKTGTGKT 75


>sp|CDC6_METMJ|ORC1-TYPE DNA replication protein|Methanoculleus marisnigri (strain ATCC

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 67 GKTGTGKT 74


>sp|CDC6_METHJ|ORC1-TYPE DNA replication protein|Methanospirillum hungatei JF-1 (strain

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 67 GKTGTGKT 74


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 124 GKTGTGKT 131


>sp|CDC67_HALSA|ORC1-TYPE DNA replication protein 7|Halobacterium salinarum (strain ATCC

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 90 GKTGTGKT 97


>sp|CDC61_ARCFU|ORC1-TYPE DNA replication protein 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 59 GKTGTGKT 66


>sp|Y121_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GNTGSGKTTL 10
G TGSGK+ L
Sbjct: 36 GPTGSGKSNL 45


>sp|KTHY_SULAC|PROBABLE thymidylate kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 8 GIDGSGKTTI 17


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 GNTGSGKTTL 10
G +GSGK+TL
Sbjct: 649 GVSGSGKSTL 658


Query: 1 GNTGSGKTTL 10
G +GSGK++L
Sbjct: 38 GISGSGKSSL 47


>sp|KAD6_SULTO|PUTATIVE adenylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GNTGSGKTTL 10
G GSGK+T+
Sbjct: 7 GTPGSGKSTI 16


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GNTGSGKT 8
G TGSGKT
Sbjct: 52 GVTGSGKT 59


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 1 GNTGSGKT 8
G TGSGKT
Sbjct: 38 GVTGSGKT 45


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GNTGSGKT 8
G TGSGKT
Sbjct: 38 GVTGSGKT 45


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GNTGSGKT 8
G TGSGKT
Sbjct: 38 GVTGSGKT 45


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 1 GNTGSGKT 8
G TGSGKT
Sbjct: 42 GVTGSGKT 49


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GNTGSGKT 8
G TGSGKT
Sbjct: 64 GVTGSGKT 71


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 1 GNTGSGKT 8
G TGSGKT
Sbjct: 38 GVTGSGKT 45


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GNTGSGKT 8
G TGSGKT
Sbjct: 64 GVTGSGKT 71


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 1 GNTGSGKT 8
G TGSGKT
Sbjct: 53 GVTGSGKT 60


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 1 GNTGSGKT 8
G TGSGKT
Sbjct: 53 GVTGSGKT 60


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 66 GRTGTGKT 73


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus

Query: 1 GNTGSGKTTL 10
G +G+GKTT
Sbjct: 38 GPSGAGKTTF 47


>sp|CDC6_METLZ|ORC1-TYPE DNA replication protein|Methanocorpusculum labreanum (strain ATCC

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 67 GKTGTGKT 74


>sp|LIVF_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus

Query: 1 GNTGSGKTTL 10
G GSGK+TL
Sbjct: 34 GPNGSGKSTL 43


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 50 GPPGSGKTT 58


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 50 GPPGSGKTT 58


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 50 GPPGSGKTT 58


>sp|KCY_DESA1|CYTIDYLATE kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 8 GPPGSGKTT 16


>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 1 GNTGSGKTTL 10
G+ G+GK+TL
Sbjct: 38 GSNGAGKSTL 47


>sp|KAD6_THEON|PUTATIVE adenylate kinase|Thermococcus onnurineus (strain NA1)

Query: 1 GNTGSGKTTL 10
G G+GKTT+
Sbjct: 7 GTPGAGKTTV 16


>sp|Y796_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GNTGSGKTTL 10
G +GSGK+T+
Sbjct: 38 GPSGSGKSTM 47


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 67 GKTGTGKT 74


>sp|KTHY_THEVO|PROBABLE thymidylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GNTGSGKTTL 10
G G+GKTTL
Sbjct: 7 GIDGAGKTTL 16


>sp|KTHY_THEAC|PROBABLE thymidylate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GNTGSGKTTL 10
G G+GKTTL
Sbjct: 7 GIDGAGKTTL 16


>sp|KTHY1_SULTO|PROBABLE thymidylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GNTGSGKTTL 10
G G+GKTTL
Sbjct: 9 GIDGAGKTTL 18


>sp|KCY_THEVO|CYTIDYLATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GNTGSGKTTL 10
G GSGK+T+
Sbjct: 7 GKIGSGKSTV 16


>sp|KCY_THEAC|CYTIDYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GNTGSGKTTL 10
G GSGK+T+
Sbjct: 7 GKIGSGKSTV 16


>sp|CYSC_AERPE|PROBABLE adenylyl-sulfate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 17 GLPGSGKTTI 26


>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 1 GNTGSGKTTL 10
G GSGKT+L
Sbjct: 15 GPVGSGKTSL 24


>sp|Y373_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5

Query: 1 GNTGSGKTTL 10
G +GSGK+T
Sbjct: 38 GPSGSGKSTF 47


>sp|Y1815_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 1 GNTGSGKTTL 10
G +GSGK+T
Sbjct: 38 GPSGSGKSTF 47


>sp|KTHY_PYRCJ|PROBABLE thymidylate kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 7 GIDGSGKTTV 16


>sp|KCY_METAR|CYTIDYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GNTGSGKTTL 10
G GSGKT++
Sbjct: 7 GQPGSGKTSV 16


>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 1 GNTGSGKT 8
G TG+GKT
Sbjct: 76 GETGTGKT 83


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 1 GNTGSGKTTL 10
G SGKTTL
Sbjct: 39 GGVDSGKTTL 48


>sp|SRP54_PYRHO|SIGNAL recognition particle 54 kDa|Pyrococcus horikoshii (strain ATCC

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 107 GVQGSGKTT 115


>sp|SRP54_PYRAB|SIGNAL recognition particle 54 kDa|Pyrococcus abyssi (strain GE5 /

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 107 GVQGSGKTT 115


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GNTGSGKTTL 10
G G+GKTT+
Sbjct: 44 GPPGTGKTTM 53


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GNTGSGKTTL 10
G G+GKTT+
Sbjct: 44 GPPGTGKTTM 53


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GNTGSGKTTL 10
G G+GKTT+
Sbjct: 44 GPPGTGKTTM 53


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GNTGSGKTTL 10
G G+GKTT+
Sbjct: 44 GPPGTGKTTM 53


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GNTGSGKTTL 10
G G+GKTT+
Sbjct: 44 GPPGTGKTTM 53


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GNTGSGKTTL 10
G G+GKTT+
Sbjct: 44 GPPGTGKTTM 53


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GNTGSGKTTL 10
G G+GKTT+
Sbjct: 44 GPPGTGKTTM 53


>sp|KTHY_METHJ|PROBABLE thymidylate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GNTGSGKTTL 10
G GSGK+TL
Sbjct: 7 GIDGSGKSTL 16


>sp|KTHY_HALSA|PROBABLE thymidylate kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 7 GLDGSGKTTV 16


>sp|KTHY_HALS3|PROBABLE thymidylate kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 7 GLDGSGKTTV 16


>sp|KTHY_HALLT|PROBABLE thymidylate kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 7 GLDGSGKTTV 16


>sp|Y4342_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 40 GEKGAGKSTL 49


>sp|Y1629_PYRAE|UPF0200 protein PAE1629|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 9 GLPGSGKTTV 18


>sp|PSTB2_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain

Query: 1 GNTGSGKTTL 10
G +G+GKTTL
Sbjct: 68 GPSGTGKTTL 77


>sp|Y4020_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 80 GANGAGKSTL 89


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 106 GVEGSGKTT 114


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 106 GVEGSGKTT 114


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 105 GVEGSGKTT 113


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 106 GVEGSGKTT 114


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 106 GVEGSGKTT 114


>sp|NTPTH_METTH|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GNTGSGKTTL 10
G GSGK+T+
Sbjct: 7 GRPGSGKSTM 16


>sp|KTHY_HALMA|PROBABLE thymidylate kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 7 GLDGSGKTTV 16


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNTGSGKTTL 10
G G+GKTT+
Sbjct: 586 GPAGTGKTTV 595


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 GNTGSGKTTL 10
G GSGKTT+
Sbjct: 46 GPPGSGKTTM 55


>sp|SRP54_PYRFU|SIGNAL recognition particle 54 kDa|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 107 GIQGSGKTT 115


>sp|Y547_METJA|UNCHARACTERIZED ATP-binding protein MJ0547|Methanocaldococcus jannaschii (strain

Query: 1 GNTGSGKTTL 10
G G+GKTT+
Sbjct: 14 GKGGTGKTTI 23


>sp|RFCL_METJA|REPLICATION factor C large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GNTGSGKTTL 10
G G GKTTL
Sbjct: 46 GPPGCGKTTL 55


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain

Query: 1 GNTGSGKTTL 10
G G+GKTT+
Sbjct: 29 GPNGAGKTTV 38


>sp|KADA_PYRAE|ADENYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GSGKTTL 10
GSGKTT+
Sbjct: 10 GSGKTTI 16


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 107 GIQGSGKTT 115


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 104 GLQGSGKTT 112


>sp|SRP54_ARCFU|SIGNAL recognition particle 54 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 100 GLQGSGKTT 108


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 39 GPNGAGKSTL 48


>sp|Y133_METTH|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 39 GPNGAGKSTL 48


>sp|Y035_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 39 GPNGAGKSTL 48


>sp|ECFA_METTH|ENERGY-COUPLING factor transporter ATP-binding protein|Methanothermobacter

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 35 GPNGAGKSTL 44


>sp|ECFA_METMJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanoculleus marisnigri

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 37 GPNGAGKSTL 46


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 107 GIQGSGKTT 115


>sp|Y1038_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 40 GEKGAGKSTL 49


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 TGSGKTTL 10
TGSGKT +
Sbjct: 13 TGSGKTIM 20


>sp|KTHY_PYRHO|PROBABLE thymidylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 10 GIDGSGKTT 18


>sp|KTHY_PYRFU|PROBABLE thymidylate kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 11 GIDGSGKTT 19


>sp|KTHY_PYRAB|PROBABLE thymidylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 10 GIDGSGKTT 18


>sp|KTHY_METVS|PROBABLE thymidylate kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 9 GIDGSGKTT 17


>sp|KTHY_METTH|PROBABLE thymidylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 7 GIDGSGKTT 15


>sp|KTHY_METJA|PROBABLE thymidylate kinase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 11 GIDGSGKTT 19


>sp|KTHY_META3|PROBABLE thymidylate kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 9 GIDGSGKTT 17


>sp|Y053_METJA|UNCHARACTERIZED protein MJ0053|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNTGSGKTTL 10
G TG GKT +
Sbjct: 17 GKTGCGKTEI 26


>sp|PHNC1_HALMA|PHOSPHONATES import ATP-binding protein PhnC|Haloarcula marismortui (strain

Query: 1 GNTGSGKTTL 10
G +G+GKTTL
Sbjct: 50 GPSGAGKTTL 59


>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 1 GNTGSGKTTL 10
G +G+GKTTL
Sbjct: 68 GPSGTGKTTL 77


>sp|PRNK_PYRFU|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PF0112|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNTGSGKTTL 10
G+ +GKTTL
Sbjct: 36 GDVDTGKTTL 45


>sp|Y1287_METJA|UNCHARACTERIZED protein MJ1287|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNTGSGKTTL 10
G +GKTTL
Sbjct: 33 GEVATGKTTL 42


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM 5456

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 105 GVQGSGKTT 113


>sp|KCY_NATPD|CYTIDYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GNTGSGKTTL 10
G GSGK+T+
Sbjct: 7 GPAGSGKSTV 16


>sp|Y887_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 81 GANGAGKSTL 90


>sp|Y873_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 34 GPNGAGKSTL 43


>sp|PHNC2_NATPD|PHOSPHONATES import ATP-binding protein PhnC|Natronomonas pharaonis (strain

Query: 1 GNTGSGKTTL 10
G +G+GK+TL
Sbjct: 35 GPSGAGKSTL 44


>sp|ECFA_METAC|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GNTGSGKTTL 10
G GSGK+TL
Sbjct: 35 GKNGSGKSTL 44


>sp|RFCS_HALMA|REPLICATION factor C small subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 GNTGSGKTT 9
G G+GKTT
Sbjct: 54 GPAGTGKTT 62


>sp|HFLX_NITMS|GTPASE HflX|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GNTGSGKTTL 10
G T +GKTTL
Sbjct: 190 GYTSAGKTTL 199


>sp|PRNK_PYRHO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PH0197|Pyrococcus horikoshii (strain ATCC

Query: 1 GNTGSGKTTL 10
G+ +GKTTL
Sbjct: 43 GDVDTGKTTL 52


>sp|PRNK_PYRAB|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PYRAB01840|Pyrococcus abyssi (strain GE5 /

Query: 1 GNTGSGKTTL 10
G+ +GKTTL
Sbjct: 36 GDVDTGKTTL 45


>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 1 GNTGSGKTTL 10
G+ G+GK+TL
Sbjct: 38 GHNGAGKSTL 47


>sp|SRP54_THEKO|SIGNAL recognition particle 54 kDa|Thermococcus kodakarensis (strain ATCC

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 107 GIQGSGKTT 115


>sp|NTPTH_KORCO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GNTGSGKTT 9
G GSGK+T
Sbjct: 11 GRPGSGKST 19


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 700922

Query: 3 TGSGKTT 9
TGSG+TT
Sbjct: 402 TGSGETT 408


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 3 TGSGKTT 9
TGSG+TT
Sbjct: 402 TGSGETT 408


>sp|PHNC2_HALMA|PHOSPHONATES import ATP-binding protein PhnC|Haloarcula marismortui (strain

Query: 1 GNTGSGKTTL 10
G +G+GK+TL
Sbjct: 35 GPSGAGKSTL 44


>sp|Y1841_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus

Query: 1 GNTGSGKTT 9
G GSGK+T
Sbjct: 41 GANGSGKST 49


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 GNTGSGKTTL 10
G GSGKT++
Sbjct: 54 GPPGSGKTSI 63


>sp|PSTB_PYRFU|PHOSPHATE import ATP-binding protein PstB|Pyrococcus furiosus (strain ATCC

Query: 1 GNTGSGKTTL 10
G +G GK+TL
Sbjct: 37 GPSGCGKSTL 46


>sp|PSTB_PYRAB|PHOSPHATE import ATP-binding protein PstB|Pyrococcus abyssi (strain GE5 /

Query: 1 GNTGSGKTTL 10
G +G GK+TL
Sbjct: 38 GPSGCGKSTL 47


>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 1 GNTGSGKTTL 10
G +G GK+TL
Sbjct: 39 GPSGCGKSTL 48


>sp|PSTB_ARCFU|PHOSPHATE import ATP-binding protein PstB|Archaeoglobus fulgidus (strain

Query: 1 GNTGSGKTTL 10
G +G GK+TL
Sbjct: 37 GPSGCGKSTL 46


>sp|KCY_THESM|CYTIDYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 GNTGSGKTTL 10
G GSG TTL
Sbjct: 12 GLAGSGTTTL 21


>sp|KCY_THEKO|CYTIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GNTGSGKTTL 10
G GSG TTL
Sbjct: 12 GLAGSGTTTL 21


>sp|KCY_PYRHO|CYTIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GNTGSGKTTL 10
G GSG TTL
Sbjct: 12 GLAGSGTTTL 21


>sp|KCY_PYRFU|CYTIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNTGSGKTTL 10
G GSG TTL
Sbjct: 12 GLAGSGTTTL 21


>sp|KCY_PYRAB|CYTIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 GNTGSGKTTL 10
G GSG TTL
Sbjct: 12 GLAGSGTTTL 21


>sp|ECFA_METJA|ENERGY-COUPLING factor transporter ATP-binding protein|Methanocaldococcus

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 37 GPNGAGKSTL 46


>sp|Y583_METTM|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 37 GPNGAGKSTL 46


>sp|ECFA1_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 37 GPNGAGKSTL 46


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 102 GVQGSGKTT 110


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 102 GVQGSGKTT 110


>sp|Y541_PYRHO|UNCHARACTERIZED ATP-binding protein PH0541|Pyrococcus horikoshii (strain ATCC

Query: 1 GNTGSGKTTL 10
G SGKTTL
Sbjct: 28 GPINSGKTTL 37


>sp|Y1659_METJA|UNCHARACTERIZED ATP-binding protein MJ1659|Methanocaldococcus jannaschii (strain

Query: 1 GNTGSGKTTL 10
G SGKTTL
Sbjct: 33 GPINSGKTTL 42


>sp|Y1200_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB12000|Pyrococcus abyssi (strain GE5 /

Query: 1 GNTGSGKTTL 10
G SGKTTL
Sbjct: 28 GPINSGKTTL 37


>sp|Y075_METJA|UNCHARACTERIZED ATP-binding protein MJ0075|Methanocaldococcus jannaschii (strain

Query: 1 GNTGSGKTTL 10
G SGKTTL
Sbjct: 31 GPINSGKTTL 40


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 1 GNTGSGKTTL 10
G G+GK+T+
Sbjct: 31 GRNGAGKSTI 40


>sp|CDC6G_HALMA|ORC1-TYPE DNA replication protein 7|Haloarcula marismortui (strain ATCC

Query: 1 GNTGSGKTTL 10
G TG GKT +
Sbjct: 56 GKTGVGKTAV 65


>sp|CDC68_HALSA|ORC1-TYPE DNA replication protein 8|Halobacterium salinarum (strain ATCC

Query: 1 GNTGSGKTTL 10
G TG GKT +
Sbjct: 57 GKTGVGKTAV 66


>sp|Y089_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 38 GVNGAGKSTL 47


>sp|RFCS_THEVO|REPLICATION factor C small subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GNTGSGKTT 9
G+ G+GKT+
Sbjct: 43 GSVGTGKTS 51


>sp|RFCS_THEAC|REPLICATION factor C small subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 GNTGSGKTT 9
G+ G+GKT+
Sbjct: 43 GSVGTGKTS 51


>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 1 GNTGSGKTTL 10
G TG+GKT +
Sbjct: 64 GLTGTGKTVV 73


>sp|CDC61_SULTO|ORC1-TYPE DNA replication protein 1|Sulfurisphaera tokodaii (strain DSM

Query: 1 GNTGSGKTTL 10
G TG+GKT +
Sbjct: 63 GLTGTGKTAV 72


>sp|CDC61_SULAC|ORC1-TYPE DNA replication protein 1|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GNTGSGKTTL 10
G TG+GKT +
Sbjct: 63 GLTGTGKTAV 72


>sp|CDC61_SACS2|ORC1-TYPE DNA replication protein 1|Saccharolobus solfataricus (strain ATCC

Query: 1 GNTGSGKTTL 10
G TG+GKT +
Sbjct: 63 GLTGTGKTAV 72


>sp|CDC61_AERPE|ORC1-TYPE DNA replication protein 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GNTGSGKTTL 10
G TG+GKT +
Sbjct: 59 GLTGTGKTAV 68


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 GNTGSGKTTL 10
G G+GKT+L
Sbjct: 363 GPPGTGKTSL 372


>sp|NTPTH_IGNH4|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GNTGSGKTTL 10
G G+GK+TL
Sbjct: 8 GPPGAGKSTL 17


>sp|ILVD_METVS|DIHYDROXY-ACID dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 2 NTGSGKTTL 10
NT SGKTTL
Sbjct: 336 NTVSGKTTL 344


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 3 TGSGKTTL 10
TGSGKT +
Sbjct: 55 TGSGKTLI 62


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 TGSGKTTL 10
TGSGKT +
Sbjct: 48 TGSGKTLI 55


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 3 TGSGKTTL 10
TGSGKT +
Sbjct: 55 TGSGKTLI 62


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 103 GVQGSGKTT 111


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 103 GVQGSGKTT 111


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC

Query: 1 GNTGSGKTTL 10
G G GKTTL
Sbjct: 45 GPPGCGKTTL 54


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain

Query: 1 GNTGSGKTTL 10
G+ +GKTTL
Sbjct: 19 GHVDAGKTTL 28


>sp|SRP54_HALLT|SIGNAL recognition particle 54 kDa|Halorubrum lacusprofundi (strain ATCC

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 104 GLQGSGKTT 112


>sp|MALK_THELN|TREHALOSE/MALTOSE import ATP-binding protein MalK|Thermococcus litoralis (strain

Query: 1 GNTGSGKTT 9
G +G GKTT
Sbjct: 36 GPSGCGKTT 44


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GNTGSGKTTL 10
G G+GKT+L
Sbjct: 388 GPPGTGKTSL 397


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NTGSGKTTL 10
++GSGKTT+
Sbjct: 8 SSGSGKTTI 16


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 103 GVQGSGKTT 111


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 104 GLQGSGKTT 112


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 1 GNTGSGKTT 9
G GSGKTT
Sbjct: 104 GLQGSGKTT 112


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 GNTGSGKTTL 10
G+ G GKTT
Sbjct: 257 GSPGMGKTTF 266


>sp|KCY_SULTO|CYTIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GNTGSGKTTL 10
G GSGK+T+
Sbjct: 7 GPPGSGKSTV 16


>sp|KCY_SACS2|CYTIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GNTGSGKTTL 10
G GSGKT++
Sbjct: 7 GPPGSGKTSV 16


>sp|KCY_SACI7|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GNTGSGKTTL 10
G GSGKT++
Sbjct: 7 GPPGSGKTSV 16


>sp|KCY_SACI6|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GNTGSGKTTL 10
G GSGKT++
Sbjct: 7 GPPGSGKTSV 16


>sp|KCY_SACI4|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GNTGSGKTTL 10
G GSGKT++
Sbjct: 7 GPPGSGKTSV 16


>sp|KCY_SACI3|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GNTGSGKTTL 10
G GSGKT++
Sbjct: 7 GPPGSGKTSV 16




270|Sequence|1346|1355|GKTTLLQQLM

>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GKTTLLQQLM 10
GKT L+QQL+
Sbjct: 18 GKTALVQQLV 27


>sp|Y541_PYRHO|UNCHARACTERIZED ATP-binding protein PH0541|Pyrococcus horikoshii (strain ATCC

Query: 1 GKTTLLQQLM 10
GKTTL+Q+ +
Sbjct: 33 GKTTLIQEFL 42


>sp|TRM4_METJA|TRNA (cytosine(48)-C(5))-methyltransferase|Methanocaldococcus jannaschii

Query: 1 GKTTLLQQLM 10
GKTT L QLM
Sbjct: 96 GKTTHLAQLM 105


>sp|Y731_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus

Query: 1 GKTTLLQQL 9
GKTTLL+ L
Sbjct: 39 GKTTLLKHL 47


>sp|MOBB_METJA|PUTATIVE molybdopterin-guanine dinucleotide biosynthesis

Query: 1 GKTTLLQQLM 10
GKTTL+++++
Sbjct: 13 GKTTLIEEIL 22


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 1 GKTTLLQQL 9
GKT LQQL
Sbjct: 236 GKTVTLQQL 244


>sp|Y1637_METJA|UNCHARACTERIZED protein MJ1637|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKTTLLQQL 9
GKTTLL Q+
Sbjct: 83 GKTTLLSQI 91


>sp|Y1628_METJA|UNCHARACTERIZED protein MJ1628|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKTTLLQQL 9
GKTTLLQ +
Sbjct: 262 GKTTLLQAI 270


>sp|Y1339_METJA|UNCHARACTERIZED protein MJ1339|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKTTLLQQLM 10
GKTTL++ L+
Sbjct: 17 GKTTLMENLI 26


>sp|Y765_METTH|UNCHARACTERIZED protein MTH_765|Methanothermobacter thermautotrophicus (strain

Query: 1 GKTTLLQQL 9
GKTT L+QL
Sbjct: 18 GKTTTLEQL 26


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 1 GKTTLLQQLM 10
GKTTLL ++
Sbjct: 34 GKTTLLHHIL 43


>sp|IF2P_STAMF|PROBABLE translation initiation factor IF-2|Staphylothermus marinus

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 25 GKTTLLDKI 33


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 28 GKTTLLDKI 36


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 25 GKTTLLDKI 33


>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GKTTLLQQL 9
GKTTLL+ L
Sbjct: 43 GKTTLLKIL 51


>sp|Y075_METJA|UNCHARACTERIZED ATP-binding protein MJ0075|Methanocaldococcus jannaschii (strain

Query: 1 GKTTLLQQLM 10
GKTTL+ +++
Sbjct: 36 GKTTLMMEII 45


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 1 GKTTLLQQLM 10
GK+TLL +L+
Sbjct: 57 GKSTLLDKLI 66


>sp|Y1659_METJA|UNCHARACTERIZED ATP-binding protein MJ1659|Methanocaldococcus jannaschii (strain

Query: 1 GKTTLLQQLM 10
GKTTL++ ++
Sbjct: 38 GKTTLIKHII 47


>sp|IF2P_SACS2|PROBABLE translation initiation factor IF-2|Saccharolobus solfataricus

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 24 GKTTLLDKI 32


>sp|IF2P_ARCFU|PROBABLE translation initiation factor IF-2|Archaeoglobus fulgidus (strain

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 25 GKTTLLDRI 33


>sp|PSTB2_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain

Query: 1 GKTTLLQQL 9
GKTTLL+ L
Sbjct: 73 GKTTLLRLL 81


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKTTLLQQLM 10
GK+TL++ L+
Sbjct: 402 GKSTLMESLI 411


>sp|ENGB_HALWD|PROBABLE GTP-binding protein EngB|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GKTTLLQQL 9
GK+TL+++L
Sbjct: 20 GKSTLMREL 28


>sp|ENGB_HALLT|PROBABLE GTP-binding protein EngB|Halorubrum lacusprofundi (strain ATCC

Query: 1 GKTTLLQQL 9
GK+TL+++L
Sbjct: 21 GKSTLMREL 29


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKTTLLQQL 9
GKTTLL L
Sbjct: 313 GKTTLLNVL 321


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 24 GKTTLLDKI 32


>sp|PSTB_ARCFU|PHOSPHATE import ATP-binding protein PstB|Archaeoglobus fulgidus (strain

Query: 1 GKTTLLQQL 9
GK+TLL+ L
Sbjct: 42 GKSTLLRSL 50


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 22 GKTTLLDKI 30


>sp|Y1408_METJA|UNCHARACTERIZED protein MJ1408|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKTTLLQQL 9
GK+TLL++L
Sbjct: 182 GKSTLLKKL 190


>sp|IF2P_METBF|PROBABLE translation initiation factor IF-2|Methanosarcina barkeri (strain

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 21 GKTTLLDKI 29


>sp|IF2P_IGNH4|PROBABLE translation initiation factor IF-2|Ignicoccus hospitalis (strain

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 26 GKTTLLDKI 34


>sp|IF2P_METMA|PROBABLE translation initiation factor IF-2|Methanosarcina mazei (strain

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 21 GKTTLLDKI 29


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GKTTLLQQLM 10
GK+TLL +L+
Sbjct: 59 GKSTLLDKLI 68


>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 18 GKTTLLDRI 26


>sp|IF2P_SULAC|PROBABLE translation initiation factor IF-2|Sulfolobus acidocaldarius

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 23 GKTTLLDKI 31


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GKTTLLQQL 9
GKTTL+ L
Sbjct: 68 GKTTLIHAL 76


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 27 GKTTLLDKI 35


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 1 GKTTLLQQL 9
GKTTLL +
Sbjct: 17 GKTTLLDHI 25


>sp|PHNC1_NATPD|PHOSPHONATES import ATP-binding protein PhnC|Natronomonas pharaonis (strain

Query: 1 GKTTLLQQL 9
GKTTLL+ L
Sbjct: 39 GKTTLLRCL 47


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 22 GKTTLLDKI 30


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 24 GKTTLLDKI 32


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 1 GKTTLLQQL 9
GKTTLL +
Sbjct: 17 GKTTLLDHI 25


>sp|Y1326_METJA|UNCHARACTERIZED GTP-binding protein MJ1326|Methanocaldococcus jannaschii (strain

Query: 1 GKTTLLQQL 9
GK+TLL +L
Sbjct: 96 GKSTLLNKL 104


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 1 GKTTLLQQL 9
GKTTLL ++
Sbjct: 32 GKTTLLDRI 40


>sp|Y1893_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 1 GKTTLLQQLM 10
GKTTLL+ ++
Sbjct: 319 GKTTLLKAIV 328


>sp|Y626_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB06260|Pyrococcus abyssi (strain GE5 /

Query: 1 GKTTLLQQLM 10
GKT L+Q+ +
Sbjct: 33 GKTALIQEFI 42


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 GKTTLLQQLM 10
GKTT + QL+
Sbjct: 214 GKTTHIAQLL 223


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 1 GKTTLL 6
GKTTLL
Sbjct: 17 GKTTLL 22


>sp|PHNC1_HALMA|PHOSPHONATES import ATP-binding protein PhnC|Haloarcula marismortui (strain

Query: 1 GKTTLLQ 7
GKTTLL+
Sbjct: 55 GKTTLLR 61




271|Sequence|1351|1360|LQQLMKTKKS

>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LQQLMKTKKS 10
+++++KTKKS
Sbjct: 423 IEKILKTKKS 432


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 1 LQQLMKTKKS 10
L++ +KT+KS
Sbjct: 580 LEEFLKTRKS 589




272|Sequence|1356|1365|KTKKSDLGMQ

>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 1 KTKKSDLGMQ 10
KTK++ LG+Q
Sbjct: 389 KTKRNALGLQ 398


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KSDLGM 9
KSDLGM
Sbjct: 737 KSDLGM 742


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 KSDLGM 9
KSDLGM
Sbjct: 737 KSDLGM 742


>sp|RRP4_ARCFU|EXOSOME complex component Rrp4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KTKKSDLGMQ 10
K +K+D+G+Q
Sbjct: 214 KRRKADVGIQ 223




273|Sequence|1361|1370|DLGMQSATVG

>sp|RL18_META3|LARGE ribosomal subunit protein uL18|Methanococcus aeolicus (strain ATCC

Query: 1 DLGMQSATVG 10
DLG+ SAT G
Sbjct: 104 DLGLNSATKG 113


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DLGMQSATV 9
D+G Q AT+
Sbjct: 158 DMGKQEATI 166




274|Sequence|1366|1375|SATVGIDVKD

>sp|PSB2_SULTO|PROTEASOME subunit beta 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SATVGIDVKD 10
+ TVGI VKD
Sbjct: 14 TTTVGIKVKD 23


>sp|PSB1_PYRHO|PROTEASOME subunit beta 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SATVGIDVKD 10
+ TVGI VKD
Sbjct: 7 TTTVGIKVKD 16


>sp|PSB2_SULAC|PROTEASOME subunit beta 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SATVGIDVKD 10
+ TVGI VKD
Sbjct: 11 TTTVGIKVKD 20


>sp|PSB1_PYRFU|PROTEASOME subunit beta 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SATVGIDVKD 10
+ TVGI VKD
Sbjct: 7 TTTVGIKVKD 16


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 TVGIDVK 9
T+GID+K
Sbjct: 386 TIGIDIK 392


>sp|PSB1_PYRAB|PROTEASOME subunit beta 1|Pyrococcus abyssi (strain GE5 /

Query: 1 SATVGIDVKD 10
+ TVGI VKD
Sbjct: 7 TTTVGIRVKD 16


>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum (strain

Query: 1 SATVGIDVK 9
+A VGID+K
Sbjct: 316 AAMVGIDIK 324


>sp|PSB1_PYRAE|PROTEASOME subunit beta 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SATVGIDVKD 10
+ TVGI VKD
Sbjct: 2 TTTVGIAVKD 11


>sp|GATD_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosphaera stadtmanae (strain ATCC

Query: 4 VGIDVKD 10
+GID+KD
Sbjct: 57 IGIDIKD 63


>sp|KCY_PYRAR|CYTIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ATVGIDVKD 10
A GID+KD
Sbjct: 137 AIYGIDIKD 145


>sp|PSB2_THESM|PROTEASOME subunit beta 2|Thermococcus sibiricus (strain DSM 12597

Query: 1 SATVGIDVKD 10
+ TVGI +KD
Sbjct: 7 TTTVGIKLKD 16


>sp|PSB_THEAC|PROTEASOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SATVGIDVKD 10
+ TVGI +KD
Sbjct: 9 TTTVGITLKD 18


>sp|PSB1_PYRAR|PROTEASOME subunit beta 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SATVGIDVKD 10
+ TVGI VKD
Sbjct: 2 TTTVGIVVKD 11


>sp|PSB2_THEGJ|PROTEASOME subunit beta 2|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SATVGIDVKD 10
+ TVGI VK+
Sbjct: 8 TTTVGIKVKE 17




275|Sequence|1371|1380|IDVKDWPIQI

>sp|Y155_ARCFU|UNCHARACTERIZED protein AF_0155|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DVKDWPIQI 10
+VK WP++I
Sbjct: 3 EVKQWPVKI 11


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 DVKDWPIQ 9
DV DWP++
Sbjct: 339 DVSDWPVE 346


>sp|RL10E_HALSA|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain

Query: 2 DVKDWPIQI 10
D D+P+QI
Sbjct: 42 DADDYPVQI 50


>sp|RL10E_HALS3|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain

Query: 2 DVKDWPIQI 10
D D+P+QI
Sbjct: 42 DADDYPVQI 50


>sp|RL10E_HALMA|LARGE ribosomal subunit protein uL16|Haloarcula marismortui (strain

Query: 2 DVKDWPIQI 10
D D+P+QI
Sbjct: 42 DADDYPVQI 50


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 IDVKDWPI 8
++VKDW I
Sbjct: 102 VEVKDWKI 109


>sp|CBPX1_SACS2|THERMOSTABLE carboxypeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DVKDWPIQI 10
+++DW IQI
Sbjct: 13 EIEDWIIQI 21


>sp|CBPX2_SACS2|THERMOSTABLE carboxypeptidase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DVKDWPIQI 10
+++DW IQI
Sbjct: 13 EIEDWIIQI 21


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IDVKDWPI 8
ID KD+PI
Sbjct: 532 IDGKDYPI 539


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 1 IDVKDWPIQ 9
+DV D+P++
Sbjct: 291 LDVTDYPVE 299


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IDVKDWPIQ 9
+++KDW I+
Sbjct: 698 LEIKDWDIE 706


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IDVKDWPIQ 9
+++KDW I+
Sbjct: 698 LEIKDWDIE 706


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IDVKDWPIQ 9
+++KDW I+
Sbjct: 698 LEIKDWDIE 706


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IDVKDWPIQ 9
+++KDW I+
Sbjct: 698 LEIKDWDIE 706


>sp|MDH_PYRIL|MALATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DVKDWPIQI 10
DV+D P+++
Sbjct: 256 DVRDVPVEV 264


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IDVKDWPIQ 9
+++KDW I+
Sbjct: 698 LEIKDWDIE 706


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IDVKDWPIQ 9
+++KDW I+
Sbjct: 698 LEIKDWDIE 706


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IDVKDWPIQ 9
+++KDW I+
Sbjct: 698 LEIKDWDIE 706


>sp|RNZ_ARCFU|RIBONUCLEASE Z|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DVKDWPIQ 9
++KDW I+
Sbjct: 235 ELKDWAIE 242


>sp|ARSC_HALSA|PUTATIVE arsenate reductase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IDVKDWPI 8
+DV+DW +
Sbjct: 102 VDVRDWAL 109


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 IDVKDWP 7
IDVKD P
Sbjct: 308 IDVKDTP 314


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IDVKDWPIQ 9
I++KDW I+
Sbjct: 697 IEIKDWDIE 705


>sp|AMZA_METJA|ARCHAEMETZINCIN jannaschii (strain ATCC 43067

Query: 1 IDVKDW 6
+D+KDW
Sbjct: 155 VDLKDW 160


>sp|SUA5_PYRAB|THREONYLCARBAMOYL-AMP synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 IDVKDWP 7
ID+ +WP
Sbjct: 184 IDLTEWP 190


>sp|SPEH_AERPE|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 IDVKDWPI 8
+D+K W I
Sbjct: 58 LDIKSWKI 65


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 IDVKDWPIQ 9
+++KDW ++
Sbjct: 694 LEIKDWDVE 702


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 VKDWP 7
V+DWP
Sbjct: 255 VRDWP 259




276|Sequence|1376|1385|WPIQIRDKRK

>sp|THIE_METHJ|THIAMINE-PHOSPHATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IQIRDKRK 10
IQ+RDKR+
Sbjct: 34 IQLRDKRR 41


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WPIQIRDK 8
WPI+ RD+
Sbjct: 332 WPIKPRDE 339


>sp|THIE_METMJ|THIAMINE-PHOSPHATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 IQIRDKR 9
IQ+RDKR
Sbjct: 34 IQLRDKR 40


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 WPIQIRDKRK 10
W + IRD++K
Sbjct: 30 WEVGIRDEKK 39


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WPIQIRDK 8
W IQI+D+
Sbjct: 349 WWIQIKDR 356


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 1 WPIQIRDKRK 10
WP++I+D +K
Sbjct: 49 WPLRIKDIKK 58


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 1 WPIQIRDKRK 10
WP++ + +RK
Sbjct: 89 WPVERKLRRK 98


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WPIQIRDKRK 10
WP +RD ++
Sbjct: 215 WPSNVRDMQR 224


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 PIQIRDKR 9
P+Q RD R
Sbjct: 341 PVQFRDDR 348


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 PIQIRDKR 9
P+Q RD R
Sbjct: 341 PVQFRDDR 348


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 WPIQIRDK 8
WP+ I+D+
Sbjct: 34 WPMIIKDR 41


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 WPIQIRDKRK 10
WP+ + K+K
Sbjct: 445 WPVPVNIKKK 454




277|Sequence|1381|1390|RDKRKRDLVL

>sp|COBQ_METB6|PROBABLE cobyric acid synthase|Methanoregula boonei (strain DSM 21154

Query: 2 DKRKRDL 8
DKR RDL
Sbjct: 239 DKRHRDL 245


>sp|TRPF_METAR|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanocella arvoryzae (strain DSM 22066

Query: 2 DKRKRDLVL 10
+KRK+DL L
Sbjct: 193 EKRKKDLRL 201


>sp|UBIX_METTH|FLAVIN prenyltransferase UbiX|Methanothermobacter thermautotrophicus

Query: 3 KRKRDLVL 10
K +RDLVL
Sbjct: 115 KERRDLVL 122




278|Sequence|1386|1395|RDLVLNVWDF

>sp|IDI2_THEKO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RDLVLNVWDF 10
+DL L WD+
Sbjct: 249 KDLALRFWDW 258


>sp|DGGGP_THEKO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 LNVWDF 10
+N+WDF
Sbjct: 102 INIWDF 107


>sp|RS8E_NANEQ|SMALL ribosomal subunit protein eS8|Nanoarchaeum equitans (strain

Query: 1 RDLVLNVWD 9
RD+ +NV+D
Sbjct: 59 RDMYVNVYD 67


>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 1 RDLVLNVW 8
R L+LNVW
Sbjct: 52 RLLILNVW 59


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DLVLNVWD 9
+L +NVWD
Sbjct: 235 ELDINVWD 242


>sp|MOAC_THEVO|PROBABLE cyclic pyranopterin monophosphate synthase|Thermoplasma volcanium

Query: 4 VLNVWD 9
+LN+WD
Sbjct: 114 LLNIWD 119


>sp|AATC_METST|A-TYPE ATP synthase subunit C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DLVLNVWD 9
DL+L+ WD
Sbjct: 128 DLMLDQWD 135


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DLVLNVW 8
DLVL VW
Sbjct: 268 DLVLYVW 274


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DLVLNVW 8
DLVL VW
Sbjct: 255 DLVLYVW 261


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 LNVWD 9
LNVWD
Sbjct: 94 LNVWD 98


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DLVLNVW 8
DLVL VW
Sbjct: 253 DLVLYVW 259


>sp|RNP2_SACI6|RIBONUCLEASE P protein component 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RDLVLNVW 8
+DL+ NVW
Sbjct: 70 KDLLGNVW 77


>sp|BRIX_THEKO|PROBABLE Brix domain-containing ribosomal biogenesis|Thermococcus

Query: 1 RDLVLNVW 8
R L++NVW
Sbjct: 52 RLLIINVW 59


>sp|BRIX_PYRAB|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus abyssi

Query: 1 RDLVLNVW 8
R L++NVW
Sbjct: 52 RLLIINVW 59


>sp|RNP2_SACI7|RIBONUCLEASE P protein component 2|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 RDLVLNVW 8
+DL+ NVW
Sbjct: 70 KDLLGNVW 77


>sp|RNP2_SACI4|RIBONUCLEASE P protein component 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RDLVLNVW 8
+DL+ NVW
Sbjct: 70 KDLLGNVW 77


>sp|RNP2_SACI3|RIBONUCLEASE P protein component 2|Saccharolobus islandicus (strain M.16.27)

Query: 1 RDLVLNVW 8
+DL+ NVW
Sbjct: 70 KDLLGNVW 77


>sp|RNP2_SACI1|RIBONUCLEASE P protein component 2|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 RDLVLNVW 8
+DL+ NVW
Sbjct: 70 KDLLGNVW 77


>sp|RNP2_SACI2|RIBONUCLEASE P protein component 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RDLVLNVW 8
+DL+ NVW
Sbjct: 70 KDLLGNVW 77


>sp|BRIX_PYRHO|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus horikoshii

Query: 1 RDLVLNVW 8
R L++NVW
Sbjct: 52 RLLIINVW 59




279|Sequence|1391|1400|NVWDFAGREE

>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VWDFAGRE 9
+WDF G+E
Sbjct: 47 MWDFEGKE 54


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VWDFAGRE 9
+WDF G+E
Sbjct: 47 MWDFEGKE 54


>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 VWDFAGRE 9
+WDF G+E
Sbjct: 47 MWDFEGKE 54


>sp|CAPPA_ARCFU|PHOSPHOENOLPYRUVATE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VWDFAGRE 9
+WDF G+E
Sbjct: 47 MWDFEGKE 54


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC

Query: 4 DFAGRE 9
DFAGRE
Sbjct: 57 DFAGRE 62


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DFAGRE 9
DFAGRE
Sbjct: 57 DFAGRE 62


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VWDFAGRE 9
+WDF G++
Sbjct: 49 MWDFEGKD 56


>sp|HUTI_PYRAR|IMIDAZOLONEPROPIONASE arsenaticum (strain DSM 13514

Query: 1 NVWDFA 6
N+WDF
Sbjct: 55 NIWDFG 60


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 2 VWDFAGREE 10
VWD REE
Sbjct: 195 VWDTVDREE 203


>sp|DGGGP_THEKO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NVWDF 5
N+WDF
Sbjct: 103 NIWDF 107


>sp|FEN_PYRIL|FLAP endonuclease 1|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VWDFAGREE 10
VW+F G E+
Sbjct: 257 VWEFGGLEK 265


>sp|CAPPA_HALSA|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NVWDFAGRE 9
+WDF G+E
Sbjct: 48 QMWDFEGKE 56


>sp|CAPPA_HALS3|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NVWDFAGRE 9
+WDF G+E
Sbjct: 48 QMWDFEGKE 56


>sp|GLK_PYRCJ|GLUCOKINASE calidifontis (strain DSM 21063

Query: 1 NVWDFAGRE 9
N WD GRE
Sbjct: 240 NNWDIVGRE 248


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 2 VWDFAGR 8
VWD GR
Sbjct: 22 VWDIEGR 28


>sp|CAS1_KORCO|CRISPR-ASSOCIATED endonuclease Cas1|Korarchaeum cryptofilum (strain OPF8)

Query: 3 WDFAGREE 10
W F GRE+
Sbjct: 191 WKFRGREK 198


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NVWDFAGREE 10
++WDF R++
Sbjct: 164 HLWDFVNRDK 173


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 VWDFAGRE 9
VWD +GR+
Sbjct: 26 VWDDSGRK 33


>sp|TOP6A_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 NVWDFAGRE 9
+VW + GRE
Sbjct: 56 DVWVYGGRE 64


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WDFAGREE 10
W+ AGRE+
Sbjct: 417 WEIAGREQ 424


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 WDFAGREE 10
W+ AGRE+
Sbjct: 417 WEIAGREQ 424


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 VWDFAGREE 10
+W + G+EE
Sbjct: 801 IWSWMGKEE 809


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 3 WDFAGREE 10
WD G EE
Sbjct: 565 WDSLGHEE 572




280|Sequence|1396|1405|AGREEFYSTH

>sp|NDK_STAMF|NUCLEOSIDE diphosphate kinase|Staphylothermus marinus (strain ATCC 43588

Query: 4 EEFYSTH 10
EEFYS H
Sbjct: 48 EEFYSVH 54


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GREEFYSTH 10
GR EFY+++
Sbjct: 93 GRSEFYTSY 101


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GREEFYSTH 10
GR EFY+++
Sbjct: 93 GRSEFYTSY 101


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GREEFYSTH 10
GR EFY+++
Sbjct: 93 GRSEFYTSY 101


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GREEFYSTH 10
GR EFY+++
Sbjct: 93 GRSEFYTSY 101


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GREEFYSTH 10
GR EFY+++
Sbjct: 93 GRSEFYTSY 101


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GREEFYSTH 10
GR EFY+++
Sbjct: 93 GRSEFYTSY 101


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GREEFYSTH 10
GR EFY+++
Sbjct: 93 GRSEFYTSY 101


>sp|NDK_AERPE|NUCLEOSIDE diphosphate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 4 EEFYSTH 10
EEFYS H
Sbjct: 48 EEFYSVH 54


>sp|Y778_AERPE|PUTATIVE HTH-type transcriptional regulatory protein|Aeropyrum pernix

Query: 1 AGREEFYST 9
+GREE Y T
Sbjct: 119 SGREEVYVT 127


>sp|TMBL1_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 2 GREEFYS 8
G+E FYS
Sbjct: 214 GKERFYS 220


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 AGREEFYSTH 10
AGR FY H
Sbjct: 174 AGRTYFYGAH 183


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GREEFYSTH 10
GR+E Y H
Sbjct: 457 GRKEVYERH 465


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GREEFYSTH 10
G+E FY H
Sbjct: 377 GKEYFYPRH 385


>sp|GUAAA_METKA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanopyrus kandleri

Query: 1 AGREEFYST 9
AGREE+ T
Sbjct: 94 AGREEYART 102




281|Sequence|1401|1410|FYSTHPHFMT

>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 4 THPHFMT 10
+HPHF+T
Sbjct: 63 SHPHFLT 69


>sp|HTPX_THEAC|PROTEASE HtpX homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FYSTHPH 7
F+S HPH
Sbjct: 297 FFSDHPH 303


>sp|HTPX1_SULTO|PROTEASE HtpX homolog 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 STHPH 7
STHPH
Sbjct: 290 STHPH 294


>sp|MPTA_PICTO|GTP cyclohydrolase MptA|Picrophilus torridus (strain ATCC 700027

Query: 1 FYSTHPH 7
F S HPH
Sbjct: 247 FESIHPH 253




282|Sequence|1406|1415|PHFMTQRALY

>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HFMTQR 7
HFMTQR
Sbjct: 334 HFMTQR 339


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 PHFMTQRA 8
PH +TQRA
Sbjct: 796 PHKVTQRA 803


>sp|ARDF_PYRFU|ARCHAEAL ribosome dimerization factor|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PHFMTQRALY 10
P+F RALY
Sbjct: 227 PNFRELRALY 236




283|Sequence|1411|1420|QRALYLAVYD

>sp|Y759_ARCFU|UNCHARACTERIZED protein AF_0759|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LYLAVYD 10
LYL++YD
Sbjct: 169 LYLSIYD 175


>sp|THIE_THEVO|THIAMINE-PHOSPHATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RALYLAVYD 10
R LYL YD
Sbjct: 7 RGLYLVTYD 15


>sp|COBS_PYRIL|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QRALYLAVYD 10
RALYLA D
Sbjct: 208 TRALYLATVD 217


>sp|PURO_METM5|IMP cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 2 RALYLAVYD 10
+A YL VYD
Sbjct: 143 KAYYLGVYD 151


>sp|PURO_METM6|IMP cyclohydrolase|Methanococcus maripaludis (strain C6 /

Query: 2 RALYLAVYD 10
+A YLAVY+
Sbjct: 143 KAYYLAVYE 151




284|Sequence|1416|1425|LAVYDLSKGQ

>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 2 AVYDLSKGQ 10
AVY L+KGQ
Sbjct: 122 AVYGLTKGQ 130


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 2 AVYDLSKG 9
AV+D+SKG
Sbjct: 601 AVHDVSKG 608


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 2 AVYDLSKGQ 10
VY L+KGQ
Sbjct: 119 GVYGLTKGQ 127


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 AVYDLSKGQ 10
VY L+KGQ
Sbjct: 119 GVYGLTKGQ 127


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 AVYDLSKGQ 10
VY L+KGQ
Sbjct: 119 GVYGLTKGQ 127


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 2 AVYDLSKG 9
AV+D+SKG
Sbjct: 602 AVHDVSKG 609


>sp|OFOB_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Saccharolobus solfataricus (Sulfolobus

Query: 2 AVYDLSKGQ 10
VY L+KGQ
Sbjct: 119 GVYGLTKGQ 127


>sp|PYRDB_PYRHO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus horikoshii (strain

Query: 2 AVYDLSK 8
AVYDL+K
Sbjct: 225 AVYDLAK 231


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 AVYDLSKGQ 10
AV+DL GQ
Sbjct: 828 AVFDLDSGQ 836


>sp|HIS6_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus (strain

Query: 4 YDLSKGQ 10
+DLSKG+
Sbjct: 139 FDLSKGE 145


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 AVYDLSKG 9
+V+D+SKG
Sbjct: 608 SVHDISKG 615


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 2 AVYDLSKG 9
A++DLS+G
Sbjct: 194 AIHDLSEG 201


>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 1 LAVYDLSKG 9
LAV+D+S G
Sbjct: 600 LAVHDISDG 608


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 1 LAVYDLSKG 9
LAV+D+S G
Sbjct: 600 LAVHDISDG 608


>sp|DPHB_METKA|DIPHTHINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 AVYDLSKG 9
+VYD+S+G
Sbjct: 38 SVYDVSEG 45


>sp|FLAB4_PYRAB|FLAGELLIN B4|Pyrococcus abyssi (strain GE5 /

Query: 1 LAVYDLSKG 9
L VY+ SKG
Sbjct: 105 LVVYNYSKG 113




285|Sequence|1421|1430|LSKGQAEVDA

>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 KGQAEVDA 10
KGQA +DA
Sbjct: 324 KGQATLDA 331




286|Sequence|1426|1435|AEVDAMKPWL

>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EVDAMKPWL 10
E DA+KP+L
Sbjct: 148 EFDALKPFL 156


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 2 EVDAMKPW 9
E+D +PW
Sbjct: 228 EIDKYRPW 235


>sp|DTDA_THEAC|D-AMINOACYL-TRNA deacylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 DAMKPW 9
DA++PW
Sbjct: 207 DALEPW 212


>sp|THII_SULAC|PROBABLE tRNA sulfurtransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EVDAMKPW 9
EVD +K W
Sbjct: 212 EVDVLKQW 219


>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 AEVDAMKPWL 10
E+D +K WL
Sbjct: 248 GEMDLIKEWL 257


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AEVDAMKP 8
AE+D KP
Sbjct: 263 AEIDGFKP 270


>sp|3MGH_METAR|PUTATIVE 3-methyladenine DNA glycosylase|Methanocella arvoryzae (strain DSM

Query: 4 DAMKPW 9
DA++PW
Sbjct: 177 DALRPW 182


>sp|TMG10_METTH|TRNA (guanine(10)-N2)-dimethyltransferase|Methanothermobacter

Query: 2 EVDAMKPW 9
+VD KPW
Sbjct: 122 KVDLEKPW 129




287|Sequence|1431|1440|MKPWLFNIKA

>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 MKPWLFNIK 9
M PWL NIK
Sbjct: 3 MHPWLPNIK 11


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 1 MKPWLFNIK 9
M PWL N+K
Sbjct: 3 MHPWLPNLK 11


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PWLFNIKA 10
PW+F+I A
Sbjct: 331 PWVFDILA 338


>sp|MT51_METJA|PUTATIVE type II methyltransferase M.MJ0563P|Methanocaldococcus jannaschii

Query: 1 MKPWLFNIKA 10
+K +L+NIKA
Sbjct: 35 VKTYLYNIKA 44


>sp|KPTA_PYRAB|PROBABLE RNA 2'-phosphotransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 PWLFNIK 9
PW FN++
Sbjct: 23 PWSFNLQ 29


>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KPWLFNI 8
KPW+ N+
Sbjct: 314 KPWIVNL 320


>sp|Y585_METJA|UNCHARACTERIZED protein MJ0585|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WLFNIKA 10
WLFNI A
Sbjct: 151 WLFNILA 157


>sp|GCSH1_SACS2|PROBABLE glycine cleavage system H|Saccharolobus solfataricus (strain ATCC

Query: 4 WLFNIKA 10
W+F +KA
Sbjct: 108 WIFKLKA 114


>sp|Y326_METJA|PUTATIVE permease MJ0326|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MKPWLFNI 8
++ W+FN+
Sbjct: 123 IRTWIFNV 130




288|Sequence|1436|1445|FNIKARASSS

>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 NIKARASS 9
N+KA ASS
Sbjct: 105 NVKANASS 112


>sp|RTCA_METTH|RNA 3'-terminal phosphate cyclase|Methanothermobacter

Query: 1 FNIKARASSS 10
+NI+AR S S
Sbjct: 33 YNIRARRSRS 42




289|Sequence|1441|1450|RASSSPVILV

>sp|TRPA_THEKO|TRYPTOPHAN synthase alpha chain|Thermococcus kodakarensis (strain ATCC

Query: 1 RASSSPVILV 10
R SS+PVIL+
Sbjct: 77 RHSSTPVILM 86


>sp|CDPAS_PYRHO|CDP-ARCHAEOL synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ASSSPVIL 9
A+SSPV+L
Sbjct: 19 ANSSPVVL 26


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 RASSSPVILV 10
R +S PVIL+
Sbjct: 132 RNASQPVILI 141


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RASSSPVILV 10
+A +SPVIL+
Sbjct: 110 KALNSPVILI 119


>sp|CDPAS_PYRAB|CDP-ARCHAEOL synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 ASSSPVIL 9
A+SSPV+L
Sbjct: 17 ANSSPVVL 24


>sp|CDPAS_PYRFU|CDP-ARCHAEOL synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ASSSPVIL 9
A+SSPVIL
Sbjct: 17 ANSSPVIL 24




290|Sequence|1446|1455|PVILVGTHLD

>sp|THI4_PYRAB|THIAMINE thiazole synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 PVILVGTHLD 10
PV++ G H+D
Sbjct: 145 PVLMTGLHVD 154


>sp|THI4_PYRHO|THIAMINE thiazole synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PVILVGTHLD 10
PV++ G H+D
Sbjct: 145 PVLMAGLHVD 154


>sp|GGGPS_KORCO|GERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 VILVGTHLD 10
VI+VGTH++
Sbjct: 218 VIVVGTHIE 226


>sp|THI4_THEKO|THIAMINE thiazole synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PVILVGTHLD 10
PV++ G H+D
Sbjct: 144 PVMMTGLHVD 153


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 VGTHLD 10
VGTHLD
Sbjct: 251 VGTHLD 256


>sp|LYSK_PYRFU|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus furiosus

Query: 1 PVILVGTHLD 10
P+IL+ H+D
Sbjct: 59 PLILLAGHMD 68


>sp|MDH_METKA|MALATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 VILVGTHLD 10
VI +GTHLD
Sbjct: 143 VIGLGTHLD 151


>sp|COBD_METTP|PROBABLE cobalamin biosynthesis protein CobD|Methanothrix thermoacetophila

Query: 1 PVILVGTHLD 10
PV+++GT +D
Sbjct: 30 PVVIIGTAVD 39


>sp|LYSK_PYRAB|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus abyssi

Query: 1 PVILVGTHLD 10
P+IL+ H+D
Sbjct: 60 PLILLAGHVD 69


>sp|TRMY_METJA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocaldococcus

Query: 1 PVILVGTHL 9
PV ++G H+
Sbjct: 151 PVFIIGDHI 159


>sp|LYSK_PYRHO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus horikoshii

Query: 1 PVILVGTHLD 10
P++L+ H+D
Sbjct: 59 PLVLLAGHID 68


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 ILVGTH 8
ILVGTH
Sbjct: 390 ILVGTH 395


>sp|PGK2_METVS|2-PHOSPHOGLYCERATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VILVGTHL 9
VIL GTH+
Sbjct: 200 VILEGTHI 207


>sp|PGK2_METM6|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 VILVGTHL 9
VIL GTH+
Sbjct: 200 VILEGTHI 207


>sp|TRUA_PYRAR|TRNA pseudouridine synthase A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 ILVGTH 8
+LVGTH
Sbjct: 114 VLVGTH 119


>sp|RPO3_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus solfataricus (strain ATCC

Query: 1 PVILVGTH 8
P++L+GT+
Sbjct: 129 PIVLLGTN 136


>sp|IF2P_STAMF|PROBABLE translation initiation factor IF-2|Staphylothermus marinus (strain

Query: 3 ILVGTHLD 10
ILVG H+D
Sbjct: 546 ILVGRHVD 553


>sp|CBID_THEVO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LVGTHLD 10
++G+HLD
Sbjct: 361 IIGSHLD 367


>sp|MDH_METMP|MALATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 5 VGTHLD 10
+GTHLD
Sbjct: 146 LGTHLD 151


>sp|MDH_METJA|L-MALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 VGTHLD 10
+GTHLD
Sbjct: 146 LGTHLD 151




291|Sequence|1451|1460|GTHLDVSDEK

>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 THLDVSDE 9
THLD+SD+
Sbjct: 972 THLDLSDD 979


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HLDVSDEK 10
H+D+ DEK
Sbjct: 272 HIDIMDEK 279


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 GTHLDVSDE 9
GTHL+ DE
Sbjct: 106 GTHLETGDE 114


>sp|PURA_METBF|ADENYLOSUCCINATE synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTHLDV 6
GTHLDV
Sbjct: 224 GTHLDV 229


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 LDVSDEK 10
LDVSDE+
Sbjct: 515 LDVSDEE 521


>sp|PURA_METMA|ADENYLOSUCCINATE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTHLDV 6
GTHLDV
Sbjct: 224 GTHLDV 229


>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GTHLDV 6
GTHLDV
Sbjct: 224 GTHLDV 229


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 LDVSDEK 10
+DVSDEK
Sbjct: 118 IDVSDEK 124


>sp|KAE1_METS5|TRNA N6-adenosine threonylcarbamoyltransferase|Metallosphaera sedula

Query: 1 GTHLDVSD 8
G H+DV D
Sbjct: 306 GVHIDVKD 313


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 3 HLDVSDEK 10
H DVSDE+
Sbjct: 32 HPDVSDEE 39


>sp|LIPA_HALSA|LIPOYL synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 THLDVSD 8
+HLDV+D
Sbjct: 242 SHLDVAD 248


>sp|LIPA_HALS3|LIPOYL synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 THLDVSD 8
+HLDV+D
Sbjct: 242 SHLDVAD 248




292|Sequence|1456|1465|VSDEKQRKAC

>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 VSDEKQRKAC 10
V DE++ KAC
Sbjct: 387 VPDEEENKAC 396


>sp|DEOC_HALLT|DEOXYRIBOSE-PHOSPHATE aldolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VSDEKQRKAC 10
+SD+++R+AC
Sbjct: 130 LSDDEKRRAC 139


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 2 SDEKQRKAC 10
+DE Q+K C
Sbjct: 100 ADETQKKIC 108


>sp|VAPB7_ARCFU|PUTATIVE antitoxin VapB7|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VSDEKQRKAC 10
VSDEK +KA
Sbjct: 46 VSDEKVKKAL 55


>sp|DEOC_ACIB4|DEOXYRIBOSE-PHOSPHATE aldolase|Aciduliprofundum boonei (strain DSM 19572

Query: 1 VSDEKQRKAC 10
+SDE++ KAC
Sbjct: 135 LSDEEKIKAC 144




293|Sequence|1461|1470|QRKACMSKIT

***** No hits found ******


294|Sequence|1466|1475|MSKITKELLN

>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SKITKELLN 10
SKI KE+LN
Sbjct: 15 SKIAKEILN 23


>sp|RL13_ARCFU|LARGE ribosomal subunit protein uL13|Archaeoglobus fulgidus (strain

Query: 2 SKITKELLN 10
SKI K LLN
Sbjct: 31 SKIAKRLLN 39


>sp|Y1589_METAC|UPF0228 protein MA_1589|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MSKITKELL 9
MSKI KE++
Sbjct: 4 MSKINKEIV 12


>sp|APGM_SULAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 SKITKELLN 10
+KIT E+LN
Sbjct: 188 AKITAEVLN 196


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MSKITKELLN 10
+SK+TK+ LN
Sbjct: 111 LSKLTKDHLN 120




295|Sequence|1471|1480|KELLNKRGFP

>sp|SUI1_SULAC|PROTEIN translation factor SUI1 homolog|Sulfolobus acidocaldarius (strain

Query: 1 KELLNKRGFP 10
KELL K GFP
Sbjct: 82 KELLIKMGFP 91


>sp|SUI1_METTP|PROTEIN translation factor SUI1 homolog|Methanothrix thermoacetophila

Query: 1 KELLNKRGF 9
K+LL+K+GF
Sbjct: 87 KDLLSKKGF 95


>sp|ACDA2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 1 KELLNKRGFP 10
KELL K G P
Sbjct: 420 KELLEKNGIP 429


>sp|SUI1_SULTO|PROTEIN translation factor SUI1 homolog|Sulfurisphaera tokodaii (strain

Query: 1 KELLNKRGFP 10
KELL K G+P
Sbjct: 83 KELLMKMGYP 92


>sp|IDI2_METTH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ELLNKRGF 9
E LN+RGF
Sbjct: 333 EWLNQRGF 340


>sp|PDXS_META3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus aeolicus (strain

Query: 1 KELLNKRG 8
KELL KRG
Sbjct: 291 KELLAKRG 298


>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 2 ELLNKRGF 9
EL+ KRGF
Sbjct: 7 ELIRKRGF 14


>sp|ENO_HALWD|ENOLASE walsbyi (strain DSM 16790

Query: 2 ELLNKRGFP 10
E+L++RG P
Sbjct: 182 EILDERGIP 190


>sp|RL24_METST|LARGE ribosomal subunit protein uL24|Methanosphaera stadtmanae (strain

Query: 1 KELLNKRGFP 10
KE N+R FP
Sbjct: 33 KEEFNRRSFP 42


>sp|Y100_ARCFU|UPF0175 protein AF_0100|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ELLNKRGFP 10
E+L KRG P
Sbjct: 66 EILRKRGVP 74


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 2 ELLNKRGFP 10
E+LNK G P
Sbjct: 665 EVLNKLGIP 673


>sp|AROE_SACS2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 2 ELLNKRGF 9
ELLNK G+
Sbjct: 163 ELLNKNGY 170


>sp|NNRD_CENSY|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Cenarchaeum symbiosum (strain A)

Query: 1 KELLNKRGFP 10
+ LLN RG P
Sbjct: 207 RTLLNDRGAP 216


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain

Query: 1 KELLNKRGFP 10
KE+ KRG P
Sbjct: 45 KEVAAKRGIP 54


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 1 KELLNKRGFP 10
KE+ KRG P
Sbjct: 45 KEVAAKRGIP 54


>sp|AROE_SACI6|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ELLNKRGF 9
ELLNK G+
Sbjct: 163 ELLNKNGY 170


>sp|AROE_SACI4|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ELLNKRGF 9
ELLNK G+
Sbjct: 163 ELLNKNGY 170


>sp|AROE_SACI3|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.27)

Query: 2 ELLNKRGF 9
ELLNK G+
Sbjct: 163 ELLNKNGY 170


>sp|AROE_SACI2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 ELLNKRGF 9
ELLNK G+
Sbjct: 163 ELLNKNGY 170


>sp|AROE_SACI1|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 ELLNKRGF 9
ELLNK G+
Sbjct: 163 ELLNKNGY 170


>sp|SUI1_METPE|PROTEIN translation factor SUI1 homolog|Methanosphaerula palustris

Query: 1 KELLNKRGF 9
KELL K+G+
Sbjct: 87 KELLTKKGY 95


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 ELLNKRGF 9
ELLNK G+
Sbjct: 163 ELLNKNGY 170


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KELLNKRGFP 10
KELLN FP
Sbjct: 52 KELLNISDFP 61


>sp|RPO3_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermococcus kodakarensis (strain ATCC

Query: 1 KELLNKRGFP 10
KEL +RG P
Sbjct: 172 KELAERRGLP 181


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 2 ELLNKRGF 9
EL+NKRG
Sbjct: 267 ELVNKRGL 274


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 NKRGFP 10
N+RGFP
Sbjct: 35 NQRGFP 40


>sp|SUI1_ARCFU|PROTEIN translation factor SUI1 homolog|Archaeoglobus fulgidus (strain

Query: 1 KELLNKRGF 9
KELL K+GF
Sbjct: 86 KELLIKKGF 94


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KELLNKRG 8
KEL N+RG
Sbjct: 649 KELSNRRG 656


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KELLNKRGF 9
KE++ KRG+
Sbjct: 326 KEIIEKRGY 334


>sp|Y73A_ARCFU|UPF0146 protein AF_0739.1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ELLNKRGF 9
ELL +RGF
Sbjct: 31 ELLARRGF 38


>sp|SPEE_SACS2|POLYAMINE aminopropyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 KELLNKRG 8
+E+LN+RG
Sbjct: 182 REILNERG 189


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 ELLNKRGFP 10
+LLNK G P
Sbjct: 675 KLLNKLGIP 683


>sp|RRP4_NITMS|EXOSOME complex component Rrp4|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KELLNKRG 8
KE+L+K+G
Sbjct: 217 KEMLDKKG 224


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 1 KELLNKRGF 9
K LLNKRG+
Sbjct: 187 KLLLNKRGW 195


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 KELLNKRGFP 10
KE+ K GFP
Sbjct: 703 KEIARKIGFP 712


>sp|RTCA_SACI4|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 KELLNKRGFP 10
+ELL+K G P
Sbjct: 208 RELLSKLGVP 217


>sp|RTCA_SACI3|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 KELLNKRGFP 10
+ELL+K G P
Sbjct: 208 RELLSKLGVP 217


>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KELLNKRGFP 10
KEL RG P
Sbjct: 70 KELAKSRGLP 79


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 3 LLNKRGFP 10
LLNK G P
Sbjct: 56 LLNKHGVP 63


>sp|SUI1_HYPBU|PROTEIN translation factor SUI1 homolog|Hyperthermus butylicus (strain

Query: 1 KELLNKRGFP 10
KE+L + GFP
Sbjct: 86 KEILVEMGFP 95


>sp|NEP1_PYRIL|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum islandicum

Query: 3 LLNKRGF 9
LLNKRG
Sbjct: 74 LLNKRGL 80


>sp|PUR7_METS3|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KELLNKRG 8
KE++NK+G
Sbjct: 40 KEVMNKKG 47


>sp|SYY_METBF|TYROSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KELLNKRGFP 10
+ELLNK+ P
Sbjct: 21 EELLNKKKAP 30


>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 KELLNKRGFP 10
KELL+ G P
Sbjct: 139 KELLDAMGMP 148


>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 NKRGFP 10
+KRGFP
Sbjct: 169 SKRGFP 174


>sp|TRPD_SACS2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 KELLNKRGF 9
KEL+NK F
Sbjct: 137 KELVNKTNF 145


>sp|TRUD_THEON|PROBABLE tRNA pseudouridine synthase D|Thermococcus onnurineus (strain NA1)

Query: 1 KELLNKRGFP 10
+EL +K GFP
Sbjct: 151 RELRSKGGFP 160


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KELLNKRG 8
KE+LNK G
Sbjct: 249 KEILNKLG 256


>sp|NFI_THEKO|ENDONUCLEASE V|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LNKRGFP 10
LNK G+P
Sbjct: 167 LNKNGYP 173


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KELLNKRGF 9
KE LN+ GF
Sbjct: 387 KEFLNRLGF 395


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KELLNKRGF 9
KE+L KRG
Sbjct: 13 KEVLKKRGI 21




296|Sequence|1476|1485|KRGFPAIRDY

>sp|HDG_METAC|HYPOXANTHINE DNA glycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KRGFPAIRD 9
KRGFPA+ D
Sbjct: 3 KRGFPAVLD 11


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 5 PAIRDY 10
PAIRDY
Sbjct: 123 PAIRDY 128


>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KRGFPA 6
KRGFPA
Sbjct: 170 KRGFPA 175


>sp|Y1334_THEKO|UPF0200 protein TK1334|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KRGFPAI 7
KRGFP++
Sbjct: 22 KRGFPSV 28


>sp|HISX_PYRFU|HISTIDINOL dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KRGFPAIRDY 10
+RG AIR+Y
Sbjct: 16 ERGLEAIREY 25


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRGFPAIRDY 10
+RGF +R+Y
Sbjct: 251 ERGFITVRNY 260


>sp|CBID_METBU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KRGFPAI 7
K+G+PAI
Sbjct: 142 KKGYPAI 148


>sp|RL32_SACI7|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 2 RGFPAI 7
RGFPAI
Sbjct: 59 RGFPAI 64


>sp|RL32_SACI6|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 2 RGFPAI 7
RGFPAI
Sbjct: 59 RGFPAI 64


>sp|RL32_SACI4|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 2 RGFPAI 7
RGFPAI
Sbjct: 59 RGFPAI 64


>sp|RL32_SACI3|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 2 RGFPAI 7
RGFPAI
Sbjct: 59 RGFPAI 64


>sp|RL32_SACI2|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 2 RGFPAI 7
RGFPAI
Sbjct: 59 RGFPAI 64


>sp|RL32_SACI1|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 2 RGFPAI 7
RGFPAI
Sbjct: 59 RGFPAI 64


>sp|Y868_THEGJ|UPF0200 protein TGAM_0868|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KRGFPAI 7
KRGFP++
Sbjct: 22 KRGFPSV 28


>sp|FTSZ1_ARCFU|CELL division protein FtsZ 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KRGFPAIRDY 10
++G+P R Y
Sbjct: 353 RKGYPVTRKY 362


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 2 RGFPAIRD 9
RGF IRD
Sbjct: 82 RGFKVIRD 89


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 3 GFPAIRD 9
GFP I+D
Sbjct: 229 GFPKIKD 235


>sp|Y1556_METJA|UNCHARACTERIZED protein MJ1556|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRGFPAIRD 9
K G P IRD
Sbjct: 178 KYGIPIIRD 186


>sp|RNZ_SULTO|RIBONUCLEASE Z|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KRGFPAI 7
KRG PAI
Sbjct: 16 KRGLPAI 22


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KRGFPAIRDY 10
+RG A+R+Y
Sbjct: 17 RRGLEALREY 26


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KRGFPAIRD 9
+R FP IRD
Sbjct: 165 ERVFPEIRD 173


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RGFPAIRD 9
RGF A++D
Sbjct: 271 RGFAAVKD 278


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 5 PAIRDY 10
PA+RDY
Sbjct: 253 PAMRDY 258


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 PAIRDY 10
PA+RDY
Sbjct: 252 PAMRDY 257


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 PAIRDY 10
PA+RDY
Sbjct: 252 PAMRDY 257


>sp|RL32_SACS2|LARGE ribosomal subunit protein eL32|Saccharolobus solfataricus (strain

Query: 2 RGFPAI 7
RGFPAI
Sbjct: 59 RGFPAI 64


>sp|HDG_METBF|HYPOXANTHINE DNA glycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KRGFPAIRD 9
K+GFP + D
Sbjct: 3 KQGFPPVID 11




297|Sequence|1481|1490|AIRDYHFVNA

>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 1 AIRDYHFVN 9
AI DY F+N
Sbjct: 1014 AIEDYDFIN 1022


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 2 IRDYHFVNA 10
+ DYHF++A
Sbjct: 144 VDDYHFMSA 152


>sp|SYK_METHJ|LYSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IRDYHFVNA 10
+ DY FVNA
Sbjct: 444 MHDYDFVNA 452


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IRDYHFVNA 10
I DY F+NA
Sbjct: 111 IADYEFLNA 119


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 2 IRDYHFVNA 10
+ DYHF++A
Sbjct: 145 VDDYHFMSA 153


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 IRDYHFVNA 10
+RDY F NA
Sbjct: 427 MRDYDFKNA 435


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 4 DYHFVNA 10
DYHF++A
Sbjct: 146 DYHFMSA 152


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 2 IRDYHFVNA 10
+ DYHF++A
Sbjct: 144 VDDYHFMSA 152


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 2 IRDYHFVNA 10
+ DYHF++A
Sbjct: 144 VDDYHFMSA 152


>sp|Y708_METMA|UPF0284 protein MM_0708|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 YHFVNA 10
YHF+N+
Sbjct: 90 YHFINS 95


>sp|Y3887_METAC|UPF0284 protein MA_3887|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 YHFVNA 10
YHF+N+
Sbjct: 90 YHFINS 95


>sp|SYK2_METMA|LYSINE--TRNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DYHFVNA 10
DY F+NA
Sbjct: 464 DYDFINA 470


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DYHFVNA 10
DY F+NA
Sbjct: 464 DYDFINA 470


>sp|Y227_METJA|UNCHARACTERIZED protein MJ0227|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IRDYHFVNA 10
I+ +HF+NA
Sbjct: 50 IKYHHFINA 58


>sp|SYK_METMJ|LYSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 DYHFVNA 10
DY F+NA
Sbjct: 446 DYDFINA 452


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 5 YHFVNA 10
YHF+NA
Sbjct: 112 YHFMNA 117


>sp|Y1387_METJA|PUTATIVE nickel insertion protein|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IRDYHFV 8
+RD HF+
Sbjct: 265 VRDLHFI 271


>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AIRDYH 6
A RDYH
Sbjct: 531 AFRDYH 536




298|Sequence|1486|1495|HFVNATEESD

>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 1 HFVNAT 6
HFVN+T
Sbjct: 459 HFVNST 464


>sp|ASSY_HALMA|ARGININOSUCCINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HFVNATEE 8
H V+ATEE
Sbjct: 63 HVVDATEE 70


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HFVNATEESD 10
H VNA +E D
Sbjct: 518 HNVNAIDEED 527




299|Sequence|1491|1500|TEESDALAKL

***** No hits found ******


300|Sequence|1496|1505|ALAKLRKTII

***** No hits found ******


301|Sequence|1501|1510|RKTIINESLN

>sp|RPO1C_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Haloarcula marismortui (strain ATCC

Query: 1 RKTIINESLN 10
R+T+INE++N
Sbjct: 289 RETLINETMN 298


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 2 KTIINESL 9
K+IINESL
Sbjct: 14 KSIINESL 21


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KTIINESLN 10
KTI NE LN
Sbjct: 86 KTIANEGLN 94


>sp|MPTN_METJA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KTIINESLN 10
KT++ ES+N
Sbjct: 113 KTVVTESIN 121




302|Sequence|1506|1515|NESLNFKIRD

>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NESLNFKIRD 10
NE+L KIRD
Sbjct: 536 NETLGKKIRD 545


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NESLNFKIRD 10
+ES+N KIR+
Sbjct: 528 DESVNKKIRE 537


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 2 ESLNFKIR 9
ESLN KIR
Sbjct: 711 ESLNGKIR 718


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NESLNFKI 8
+ESLNF+I
Sbjct: 242 SESLNFEI 249


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NESLNFKI 8
+ESLNF+I
Sbjct: 242 SESLNFEI 249


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NESLNFKI 8
+ESLNF+I
Sbjct: 242 SESLNFEI 249


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NESLNFKI 8
+ESLNF+I
Sbjct: 242 SESLNFEI 249


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NESLNFKI 8
+ESLNF+I
Sbjct: 242 SESLNFEI 249


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 NESLNFKI 8
+ESLNF+I
Sbjct: 242 SESLNFEI 249


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NESLNFKI 8
+ESLNF+I
Sbjct: 242 SESLNFEI 249


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NESLNFKIRD 10
+E+LN KI+D
Sbjct: 555 DETLNKKIKD 564


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 2 ESLNFKIR 9
ESLN KIR
Sbjct: 707 ESLNGKIR 714


>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 SLNFKIRD 10
SLN ++RD
Sbjct: 364 SLNIRVRD 371


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 NESLNFKIRD 10
ESL KIRD
Sbjct: 533 GESLGKKIRD 542


>sp|Y1467_METJA|UNCHARACTERIZED protein MJ1467|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SLNFKIRD 10
S+NF I+D
Sbjct: 18 SINFSIKD 25




303|Sequence|1511|1520|FKIRDQLVVG

>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 1 FKIRDQL 7
FK RDQL
Sbjct: 184 FKFRDQL 190


>sp|XERA_PYRFU|TYROSINE recombinase XerA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KIRDQLVV 9
KIRD+L+V
Sbjct: 119 KIRDRLIV 126


>sp|Y577_METJA|UNIVERSAL stress protein MJ0577|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FKIRDQLVVG 10
FK++D +VVG
Sbjct: 97 FKVKDIIVVG 106


>sp|RS24_METHJ|SMALL ribosomal subunit protein eS24|Methanospirillum hungatei JF-1

Query: 4 RDQLVVG 10
+DQLV+G
Sbjct: 47 KDQLVIG 53


>sp|TYSY_METMA|PUTATIVE thymidylate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FKIRDQLV 8
FKIRD+ V
Sbjct: 145 FKIRDEKV 152


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 1 FKIRDQLVVG 10
K+RD+L+ G
Sbjct: 279 LKLRDRLIEG 288


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 1 FKIRDQLVVG 10
F + D+L+VG
Sbjct: 554 FDVEDELLVG 563


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 1 FKIRDQLV 8
FKI D+LV
Sbjct: 429 FKITDELV 436


>sp|RPIA_METVS|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus vannielii (strain ATCC 35089

Query: 3 IRDQLVVG 10
I+D++VVG
Sbjct: 30 IKDEMVVG 37




304|Sequence|1516|1525|QLVVGQLIPD

>sp|METK_HALWD|S-ADENOSYLMETHIONINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QLVVGQLIPD 10
QLV G+ IPD
Sbjct: 67 QLVAGESIPD 76


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 LVVGQLIPD 10
LV G+L+PD
Sbjct: 43 LVQGKLMPD 51


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 2 LVVGQLIPD 10
L G+LIPD
Sbjct: 53 LAKGELIPD 61


>sp|FLAB4_PYRHO|FLAGELLIN B4|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VVGQLIPD 10
++G++IPD
Sbjct: 184 IIGKVIPD 191


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 VGQLIPD 10
GQL+PD
Sbjct: 55 AGQLVPD 61


>sp|GUAAB_HALSA|GMP synthase [glutamine-hydrolyzing] subunit B|Halobacterium salinarum

Query: 1 QLVVGQLIPD 10
QLV G + PD
Sbjct: 122 QLVQGTIYPD 131


>sp|GUAAB_HALS3|GMP synthase [glutamine-hydrolyzing] subunit B|Halobacterium salinarum

Query: 1 QLVVGQLIPD 10
QLV G + PD
Sbjct: 122 QLVQGTIYPD 131




305|Sequence|1521|1530|QLIPDCYVEL

>sp|PORA_METJA|PYRUVATE synthase subunit PorA|Methanocaldococcus jannaschii (strain ATCC

Query: 3 IPDCYVE 9
+PDCY+E
Sbjct: 217 VPDCYME 223


>sp|DEOC_NATPD|DEOXYRIBOSE-PHOSPHATE aldolase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 IPDCYVE 9
+P CYVE
Sbjct: 40 VPPCYVE 46


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 LIPDCYVEL 10
L+ DCYV++
Sbjct: 171 LVDDCYVKI 179


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LIPDCYVEL 10
++PD YVE+
Sbjct: 70 ILPDIYVEI 78


>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 2 LIPDCYVEL 10
++PD YVE+
Sbjct: 68 ILPDIYVEI 76


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 2 LIPDCYVEL 10
++PD YVE+
Sbjct: 68 ILPDIYVEI 76


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 2 LIPDCYVEL 10
++PD YVE+
Sbjct: 67 ILPDIYVEI 75


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 QLIPDCYVE 9
QL+P YVE
Sbjct: 429 QLVPSGYVE 437


>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IPDCYVEL 10
+P C++EL
Sbjct: 140 LPSCFIEL 147


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 LIPDCYVEL 10
L+ DCYV++
Sbjct: 171 LVDDCYVKV 179


>sp|DYR1_HALMA|DIHYDROFOLATE reductase 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 IPDCY 7
IPDCY
Sbjct: 60 IPDCY 64


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QLIPDCYVE 9
Q +PD YVE
Sbjct: 139 QWLPDRYVE 147


>sp|PDXT_HALMA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Haloarcula marismortui (strain

Query: 2 LIPDCYVEL 10
L+PDC V L
Sbjct: 42 LVPDCDVLL 50


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 4 PDCYVEL 10
PD YVEL
Sbjct: 314 PDMYVEL 320


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 IPDCYVEL 10
+P+C VEL
Sbjct: 120 VPECEVEL 127


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 IPDCYVEL 10
+P+C VEL
Sbjct: 120 VPECEVEL 127


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 IPDCYVEL 10
+P+C VEL
Sbjct: 120 VPECEVEL 127


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 IPDCYVEL 10
+P+C VEL
Sbjct: 120 VPECEVEL 127


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 4 PDCYVEL 10
PD YVEL
Sbjct: 21 PDMYVEL 27


>sp|GUAAA_METM5|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 QLIPDCY 7
++IPDC+
Sbjct: 130 KVIPDCF 136


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 4 PDCYVE 9
P CYVE
Sbjct: 293 PGCYVE 298


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QLIPDCYVE 9
Q +PD YVE
Sbjct: 139 QPLPDRYVE 147


>sp|KHSE_METM5|HOMOSERINE kinase|Methanococcus maripaludis (strain C5 /

Query: 4 PDCYVE 9
P CYVE
Sbjct: 293 PGCYVE 298


>sp|KHSE_METMP|HOMOSERINE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 4 PDCYVE 9
P CYVE
Sbjct: 293 PGCYVE 298


>sp|RPO3_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus horikoshii (strain ATCC

Query: 1 QLIPDCYV 8
+++PD YV
Sbjct: 214 EIVPDTYV 221




306|Sequence|1526|1535|CYVELEKIIL

>sp|MOBA_THEKO|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus kodakarensis

Query: 1 CYVELEKI 8
CY+E+EK+
Sbjct: 161 CYIEIEKL 168


>sp|METE_AERPE|METHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 CYVELEKII 9
CY ELE+I+
Sbjct: 219 CYGELERIL 227


>sp|RS13_NANEQ|SMALL ribosomal subunit protein uS13|Nanoarchaeum equitans (strain

Query: 2 YVELEKII 9
YVEL K++
Sbjct: 28 YVELRKVV 35


>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 2 YVELEKII 9
+V+LEKII
Sbjct: 223 HVDLEKII 230


>sp|OGG1_ARCFU|8-OXOGUANINE DNA glycosylase/AP lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YVELEKIIL 10
Y+E+EKI++
Sbjct: 163 YLEVEKILM 171


>sp|RGYRA_METKA|REVERSE gyrase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 YVELEKII 9
Y+ELE+++
Sbjct: 344 YLELERVV 351


>sp|RRP42_THEGJ|EXOSOME complex component Rrp42|Thermococcus gammatolerans (strain DSM

Query: 3 VELEKIIL 10
VELEK+++
Sbjct: 120 VELEKLVI 127




307|Sequence|1531|1540|EKIILSERKN

>sp|ASPD_ARCFU|L-ASPARTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKIILSERKN 10
E+I+L+ RKN
Sbjct: 126 EEIVLTTRKN 135


>sp|DPHB_THEON|DIPHTHINE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 EKIILSERK 9
E+I+LSE K
Sbjct: 68 ERIVLSEAK 76




308|Sequence|1536|1545|SERKNVPIEF

>sp|HIS4_METAC|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina acetivorans

Query: 2 ERKNVPI 8
ERKN PI
Sbjct: 61 ERKNAPI 67


>sp|HIS4_METBF|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina barkeri (strain

Query: 2 ERKNVPI 8
ERKN PI
Sbjct: 61 ERKNAPI 67


>sp|KAD6_METS5|PUTATIVE adenylate kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 SERKNVPIE 9
SERKNV +E
Sbjct: 67 SERKNVVLE 75


>sp|IF2P_SULAC|PROBABLE translation initiation factor IF-2|Sulfolobus acidocaldarius

Query: 2 ERKNVPIEF 10
ER+N+PI
Sbjct: 380 ERRNIPIRL 388


>sp|SYH_NANEQ|HISTIDINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 ERKNVPIE 9
ERK +PIE
Sbjct: 387 ERKKIPIE 394


>sp|HIS4_METMA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina mazei (strain

Query: 2 ERKNVPI 8
ERKN PI
Sbjct: 61 ERKNSPI 67


>sp|SDO1_PYRHO|RIBOSOME maturation protein SDO1 homolog|Pyrococcus horikoshii (strain

Query: 2 ERKNVPIE 9
E KNVPIE
Sbjct: 34 EGKNVPIE 41


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 SERKNVPIEF 10
S+ +NVPI F
Sbjct: 118 SDEENVPIRF 127


>sp|RS9_DESA1|SMALL ribosomal subunit protein uS9|Desulfurococcus amylolyticus

Query: 5 NVPIEF 10
NVP+EF
Sbjct: 38 NVPVEF 43


>sp|Y434_METJA|GAMMA-GLUTAMYLCYCLOTRANSFERASE and putative RNase MJ0434|Methanocaldococcus jannaschii (strain

Query: 4 KNVPIEF 10
KN+P+EF
Sbjct: 53 KNLPMEF 59


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ERKNVPIE 9
+++NVPIE
Sbjct: 115 QKENVPIE 122


>sp|GCH3_METMP|GTP cyclohydrolase III|Methanococcus maripaludis (strain DSM 14266

Query: 2 ERKNVPIEF 10
E+KNVP +
Sbjct: 254 EQKNVPYNY 262


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ERKNVP 7
ERKN+P
Sbjct: 34 ERKNIP 39


>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 4 KNVPIEF 10
K++PIEF
Sbjct: 424 KDIPIEF 430


>sp|HIS2_METBU|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ERKNVPIE 9
+RKN P+E
Sbjct: 18 DRKNNPVE 25




309|Sequence|1541|1550|VPIEFPVIDR

>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 5 FPVIDR 10
FPVIDR
Sbjct: 181 FPVIDR 186


>sp|MDH_PYRIL|MALATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VPIEFPVI 8
VP+E PVI
Sbjct: 260 VPVEVPVI 267


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPIEFPVID 9
+PIE P ID
Sbjct: 246 LPIELPNID 254


>sp|DPHB_METS5|DIPHTHINE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VPIEFPVIDR 10
V + FPV+D+
Sbjct: 135 VTVTFPVLDK 144


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VPIEFPVIDR 10
+P FP++DR
Sbjct: 32 LPRRFPLLDR 41


>sp|MDH_PYRAE|MALATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VPIEFPVI 8
VP+E P+I
Sbjct: 260 VPVEVPII 267


>sp|IF5A_METJA|TRANSLATION initiation factor 5A|Methanocaldococcus jannaschii (strain ATCC

Query: 3 IEFPVIDR 10
+E P+IDR
Sbjct: 66 VEVPIIDR 73


>sp|TDXH_PYRFU|PEROXIREDOXIN furiosus (strain ATCC 43587

Query: 1 VPIEFPVI 8
V IEFPVI
Sbjct: 91 VEIEFPVI 98


>sp|MBLFP_SULTO|METALLO-BETA-LACTAMASE fold-containing protein ST1585|Sulfurisphaera tokodaii (strain

Query: 2 PIEFPVI 8
P+EFP I
Sbjct: 13 PVEFPEI 19


>sp|MDH_THETK|MALATE dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 VPIEFPVI 8
+P+E PV+
Sbjct: 260 IPVEVPVV 267


>sp|Y047_METJA|PROBABLE RNase MJ4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IEFPVID 9
IE+P++D
Sbjct: 38 IEYPILD 44


>sp|TDXH_PYRAB|PEROXIREDOXIN abyssi (strain GE5 /

Query: 1 VPIEFPVI 8
V IEFP+I
Sbjct: 91 VEIEFPII 98


>sp|TDXH_METMP|PEROXIREDOXIN maripaludis (strain DSM 14266

Query: 1 VPIEFPVI 8
V IEFP+I
Sbjct: 91 VDIEFPII 98


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 1 VPIEFPVIDR 10
V + FP++DR
Sbjct: 405 VRVGFPIMDR 414


>sp|TDXH_METVS|PEROXIREDOXIN vannielii (strain ATCC 35089

Query: 1 VPIEFPVI 8
V IEFP+I
Sbjct: 91 VDIEFPII 98


>sp|TDXH_METJA|PEROXIREDOXIN jannaschii (strain ATCC 43067

Query: 1 VPIEFPVI 8
V IEFP+I
Sbjct: 91 VEIEFPII 98


>sp|TDXH_METM5|PEROXIREDOXIN maripaludis (strain C5 /

Query: 1 VPIEFPVI 8
V IEFP+I
Sbjct: 91 VDIEFPII 98


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 1 VPIEFPVI 8
+ IEFPVI
Sbjct: 90 IEIEFPVI 97




310|Sequence|1546|1555|PVIDRKRLLQ

>sp|Y1322_METST|UPF0280 protein Msp_1322|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PVIDRKRLLQ 10
P+ID+K +L+
Sbjct: 57 PLIDKKPILK 66


>sp|Y104_SACS2|UNCHARACTERIZED aminotransferase SSO0104|Saccharolobus solfataricus (strain ATCC

Query: 4 DRKRLLQ 10
DRKRLL+
Sbjct: 191 DRKRLLE 197




311|Sequence|1551|1560|KRLLQLVREN

>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KRLLQLVREN 10
KR++++V+EN
Sbjct: 233 KRIVEMVQEN 242


>sp|RPO1C_HALMO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halococcus morrhuae (Micrococcus

Query: 1 KRLLQLVRE 9
+RLLQLV E
Sbjct: 203 RRLLQLVEE 211


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KRLLQLVRE 9
K+L+ LVRE
Sbjct: 232 KKLIDLVRE 240


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KRLLQLVR 8
KRL++LVR
Sbjct: 870 KRLVELVR 877


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 1 KRLLQLVRE 9
KRL+Q +RE
Sbjct: 31 KRLIQKIRE 39


>sp|MPTA_METS3|GTP cyclohydrolase MptA|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KRLLQLVREN 10
K+LLQL R N
Sbjct: 28 KKLLQLERNN 37


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RLLQLVREN 10
RL+QL+R+
Sbjct: 1505 RLMQLIRDG 1513


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RLLQLVREN 10
RL+QL+R+
Sbjct: 1008 RLIQLIRDG 1016


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RLLQLVREN 10
RL+QL+R+
Sbjct: 1419 RLIQLIRDG 1427


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LQLVREN 10
LQL+REN
Sbjct: 451 LQLLREN 457


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 LQLVREN 10
LQL+REN
Sbjct: 451 LQLLREN 457


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 4 LQLVREN 10
LQL+REN
Sbjct: 451 LQLLREN 457


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 4 LQLVREN 10
LQL+REN
Sbjct: 451 LQLLREN 457


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 LQLVREN 10
LQL+REN
Sbjct: 451 LQLLREN 457


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 LQLVREN 10
LQL+REN
Sbjct: 451 LQLLREN 457


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 LQLVREN 10
LQL+REN
Sbjct: 451 LQLLREN 457


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 2 RLLQLVREN 10
RL+QL+R+
Sbjct: 1008 RLIQLIRDG 1016




312|Sequence|1556|1565|LVRENQLQLD

***** No hits found ******


313|Sequence|1561|1570|QLQLDENELP

>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 1 QLQLDENELP 10
QL LDE ELP
Sbjct: 125 QLGLDEKELP 134


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 1 QLQLDENELP 10
++ LDENE+P
Sbjct: 4 KIVLDENEIP 13


>sp|CORA_METJA|COBALT/MAGNESIUM transport protein CorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QLQLDENELP 10
Q+ LDE E+P
Sbjct: 56 QIGLDEQEIP 65


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QLQLDENELP 10
++ LDENE+P
Sbjct: 15 KIILDENEMP 24


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC

Query: 1 QLQLDENELP 10
++ LDENE+P
Sbjct: 15 KIILDENEMP 24


>sp|RS6E_SULAC|SMALL ribosomal subunit protein eS6|Sulfolobus acidocaldarius (strain

Query: 1 QLQLDENELP 10
QL LD+++LP
Sbjct: 118 QLSLDQSKLP 127


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QLQLDENELP 10
++ LDE+E+P
Sbjct: 8 KIMLDESEMP 17


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LQLDENELP 10
Q+D NELP
Sbjct: 353 FQMDINELP 361


>sp|Y1337_METJA|UNCHARACTERIZED protein MJ1337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QLDENELP 10
++D+NE+P
Sbjct: 116 EIDDNEVP 123




314|Sequence|1566|1575|ENELPHAVHF

>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ELPHAVHF 10
ELP A HF
Sbjct: 38 ELPLATHF 45


>sp|DNLI2_METMA|DNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ELPHAVHF 10
ELP A HF
Sbjct: 38 ELPVATHF 45


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 ELPHAVHF 10
ELP A HF
Sbjct: 38 ELPIATHF 45


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 5 PHAVHF 10
PH VHF
Sbjct: 318 PHVVHF 323


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 1 ENELPH 6
ENE+PH
Sbjct: 117 ENEIPH 122


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 ENELPHAV 8
ENE+ HA+
Sbjct: 789 ENEMEHAI 796


>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 4 LPHAVHF 10
LP +VHF
Sbjct: 113 LPESVHF 119


>sp|GLCAE_SULTO|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NELPHAVH 9
NELP A H
Sbjct: 207 NELPEANH 214


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 6 HAVHF 10
HAVHF
Sbjct: 157 HAVHF 161


>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 HAVHF 10
HAVHF
Sbjct: 150 HAVHF 154


>sp|Y2179_THEKO|UNCHARACTERIZED protein TK2179|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 HAVHF 10
HAVHF
Sbjct: 154 HAVHF 158


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LPHAVH 9
LPH++H
Sbjct: 224 LPHSIH 229


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ELPHAVHF 10
+LPH V F
Sbjct: 416 DLPHLVRF 423




315|Sequence|1571|1580|HAVHFLNESG

>sp|OGG1_SULTO|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HAVHFLNESG 10
H +HFLNE G
Sbjct: 148 HVLHFLNEIG 157


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HAVHFLN 7
HAVHF N
Sbjct: 157 HAVHFTN 163


>sp|THII_ARCFU|PROBABLE tRNA sulfurtransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AVHFLNES 9
AVHF N++
Sbjct: 194 AVHFFNQT 201


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus (Sulfolobus

Query: 1 HAVHFLNESG 10
H V FL E G
Sbjct: 112 HVVKFLKEKG 121


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 3 VHFLNESG 10
VH LNE+G
Sbjct: 73 VHTLNENG 80


>sp|MTIP_METKA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanopyrus kandleri

Query: 1 HAVHFLNESG 10
H V+F+N G
Sbjct: 40 HRVYFINRHG 49


>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HAVHF 5
HAVHF
Sbjct: 150 HAVHF 154


>sp|Y3058_HALWD|PUTATIVE HTH-type transcriptional regulatory protein|Haloquadratum walsbyi

Query: 1 HAVHFLNESG 10
H VH L +G
Sbjct: 213 HVVHILTRAG 222


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HAVHFLN 7
HA HF N
Sbjct: 154 HATHFSN 160


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 HAVHFLNESG 10
HAV L E+G
Sbjct: 588 HAVRALREAG 597


>sp|CAS1A_METRM|CRISPR-ASSOCIATED protein Cas1 1|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 HAVHFLNESG 10
+ ++F+NE G
Sbjct: 19 NTIYFVNEKG 28




316|Sequence|1576|1585|LNESGVLLHF

>sp|PUR7_CALMQ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LNESGVLLHF 10
LNESGV HF
Sbjct: 62 LNESGVRTHF 71


>sp|KPTA1_ARCFU|PROBABLE RNA 2'-phosphotransferase 1|Archaeoglobus fulgidus (strain ATCC

Query: 4 SGVLLHF 10
SGVL HF
Sbjct: 41 SGVLRHF 47


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 4 SGVLLH 9
SGVLLH
Sbjct: 187 SGVLLH 192


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 4 SGVLLH 9
SGVLLH
Sbjct: 183 SGVLLH 188


>sp|DAPA_METMJ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NESGVLLHF 10
N SG++ HF
Sbjct: 113 NRSGLIKHF 121


>sp|DAPA_METBF|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 NESGVLLHF 10
N +G+L HF
Sbjct: 109 NPAGLLTHF 117


>sp|DAPA_METPE|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 NESGVLLHF 10
N SG++ HF
Sbjct: 113 NRSGLIKHF 121


>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ESGVLLHF 10
+ G+L+HF
Sbjct: 58 QKGILIHF 65


>sp|DAPA_METMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NESGVLLHF 10
N +G+L HF
Sbjct: 109 NPAGLLAHF 117


>sp|DAPA_METAC|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NESGVLLHF 10
N +G+L HF
Sbjct: 109 NPAGLLAHF 117




317|Sequence|1581|1590|VLLHFQDPAL

>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 3 LHFQDPAL 10
+HF+DP L
Sbjct: 56 VHFRDPGL 63


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 3 LHFQDPAL 10
LH +DP+L
Sbjct: 416 LHLEDPSL 423


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 LHFQDPAL 10
LH +DP+L
Sbjct: 418 LHLEDPSL 425


>sp|KTHY_METLZ|PROBABLE thymidylate kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 HFQDPA 9
HF+DPA
Sbjct: 147 HFEDPA 152


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LLHFQDPA 9
L+H+++PA
Sbjct: 585 LMHYRNPA 592


>sp|COFD_METBF|2-PHOSPHO-L-LACTATE transferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LLHFQD 7
+LHFQD
Sbjct: 144 ILHFQD 149


>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 1 VLLHFQDPA 9
++LH +DPA
Sbjct: 156 LVLHCEDPA 164


>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VLLHFQDPAL 10
+++H +DP L
Sbjct: 113 IMIHQKDPGL 122


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VLLHFQDPAL 10
+++H +DP L
Sbjct: 113 IMIHQKDPGL 122




318|Sequence|1586|1595|QDPALQLSDL

>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QDPALQLS 8
+DPA+Q+S
Sbjct: 192 RDPAMQIS 199


>sp|PHNC2_HALWD|PHOSPHONATES import ATP-binding protein PhnC|Haloquadratum walsbyi (strain DSM

Query: 1 QDPALQLSD 9
QDPAL L+D
Sbjct: 154 QDPALLLAD 162


>sp|MTTB_METBU|TRIMETHYLAMINE methyltransferase MttB|Methanococcoides burtonii (strain DSM 6242

Query: 1 QDPALQLSD 9
Q+P +Q+SD
Sbjct: 38 QNPGIQVSD 46


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 2 DPALQLSD 9
DPA+ LSD
Sbjct: 275 DPAIVLSD 282


>sp|SYY_SACS2|TYROSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PALQLSDL 10
PA+Q+SD+
Sbjct: 168 PAMQVSDI 175


>sp|SYY_SACI1|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 PALQLSDL 10
PA+Q+SD+
Sbjct: 163 PAMQVSDI 170


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DPALQLSD 9
DP +Q+SD
Sbjct: 39 DPGIQVSD 46


>sp|SYY_SACI7|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 PALQLSDL 10
PA+Q+SD+
Sbjct: 163 PAMQVSDI 170


>sp|SYY_SACI3|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 PALQLSDL 10
PA+Q+SD+
Sbjct: 163 PAMQVSDI 170


>sp|SYY_SACI2|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 PALQLSDL 10
PA+Q+SD+
Sbjct: 163 PAMQVSDI 170


>sp|SYY_SACI6|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 PALQLSDL 10
PA+Q+SD+
Sbjct: 163 PAMQVSDI 170


>sp|SYY_SACI4|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 PALQLSDL 10
PA+Q+SD+
Sbjct: 163 PAMQVSDI 170


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 2 DPALQLSD 9
DP +Q+SD
Sbjct: 39 DPGIQVSD 46


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 2 DPALQLSD 9
DP +Q+SD
Sbjct: 39 DPGIQVSD 46


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PALQLSDL 10
PA+Q+SD+
Sbjct: 163 PAMQVSDI 170


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 1 QDPALQLSD 9
+DPAL +SD
Sbjct: 538 KDPALIVSD 546




319|Sequence|1591|1600|QLSDLYFVEP

>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii (strain

Query: 1 QLSDLYFVE 9
+LSDLY +E
Sbjct: 337 KLSDLYLLE 345


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 1 QLSDLYFVEP 10
QL+ LY ++P
Sbjct: 556 QLTSLYLIKP 565


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QLSDLYFV 8
QLSD++F+
Sbjct: 160 QLSDVHFI 167


>sp|WTPA_THEKO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QLSDLYFVEP 10
+L+DLY+ +P
Sbjct: 174 KLADLYYGKP 183


>sp|RNH2_SULTO|RIBONUCLEASE HII|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SDLYFVE 9
+D+YFVE
Sbjct: 129 ADVYFVE 135


>sp|Y1845_ARCFU|UNCHARACTERIZED protein AF_1845|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DLYFVEP 10
D+Y +EP
Sbjct: 241 DIYIIEP 247


>sp|WTPA_PYRAB|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus abyssi (strain GE5 /

Query: 1 QLSDLYFVEP 10
+L+DLY+ +P
Sbjct: 170 KLADLYYGKP 179




320|Sequence|1596|1605|YFVEPKWLCK

>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 3 VEPKWL 8
VEP+WL
Sbjct: 228 VEPRWL 233


>sp|TRPC_AERPE|INDOLE-3-GLYCEROL phosphate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 FVEPKWLC 9
EP W C
Sbjct: 87 LTEPNWFC 94


>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 4 EPKWLC 9
+P+W+C
Sbjct: 61 DPRWIC 66


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 VEPKWL 8
V+PKWL
Sbjct: 304 VDPKWL 309


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 VEPKWL 8
V+PKWL
Sbjct: 304 VDPKWL 309


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VEPKWL 8
V+PKWL
Sbjct: 304 VDPKWL 309


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 YFVEPKW 7
+ +EPKW
Sbjct: 374 FMLEPKW 380


>sp|RS15_THEVO|SMALL ribosomal subunit protein uS15|Thermoplasma volcanium (strain

Query: 1 YFVEPKWL 8
Y VEP W+
Sbjct: 18 YGVEPNWV 25


>sp|DCD_METS5|DCTP deaminase|Metallosphaera sedula (strain ATCC 51363

Query: 1 YFVEPKWL 8
Y++E KW+
Sbjct: 10 YYLEKKWI 17


>sp|KTHY_METST|PROBABLE thymidylate kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 VEPKWLCK 10
+EP+W+ K
Sbjct: 108 IEPEWIYK 115


>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 5 PKWLC 9
P WLC
Sbjct: 319 PDWLC 323


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YFVEPKW 7
YF EPK+
Sbjct: 134 YFCEPKF 140


>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 4 EPKWLCK 10
EP+W+ K
Sbjct: 27 EPEWMTK 33


>sp|UPPP_PYRAE|UNDECAPRENYL-DIPHOSPHATASE aerophilum (strain ATCC 51768

Query: 1 YFVEPKWL 8
Y+V KWL
Sbjct: 100 YYVARKWL 107


>sp|PYRB_METJA|ASPARTATE carbamoyltransferase catalytic subunit|Methanocaldococcus

Query: 1 YFVEPKWL 8
YFV PK L
Sbjct: 182 YFVSPKEL 189


>sp|RS2_NITMS|SMALL ribosomal subunit protein uS2|Nitrosopumilus maritimus (strain

Query: 1 YFVEPK 6
Y++EPK
Sbjct: 110 YYIEPK 115


>sp|PGP_PYRAE|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 KWLCK 10
KWLC+
Sbjct: 156 KWLCQ 160


>sp|GGR1_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanococcoides burtonii (strain DSM 6242

Query: 3 VEPKWLC 9
++ KWLC
Sbjct: 60 LDEKWLC 66


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 VEPKW 7
+EPKW
Sbjct: 13 IEPKW 17


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 VEPKW 7
+EPKW
Sbjct: 13 IEPKW 17


>sp|RS15_THEAC|SMALL ribosomal subunit protein uS15|Thermoplasma acidophilum (strain

Query: 1 YFVEPKWL 8
Y V+P W+
Sbjct: 18 YGVQPSWI 25


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 6 KWLCK 10
KWLC+
Sbjct: 520 KWLCE 524


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 1 YFVEPKWLCK 10
Y+ +P LCK
Sbjct: 368 YYCKPDELCK 377


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 3 VEPKWL 8
+ PKWL
Sbjct: 453 ISPKWL 458


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FVEPKWLCK 10
F EPK +C+
Sbjct: 445 FSEPKVVCR 453




321|Sequence|1601|1610|KWLCKIMAQI

>sp|RUBR_PYRFU|RUBREDOXIN furiosus (strain ATCC 43587

Query: 1 KWLCKIMAQI 10
KW+CKI I
Sbjct: 3 KWVCKICGYI 12


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 2 WLCKIMAQI 10
W+C I+A I
Sbjct: 538 WICAIVAYI 546


>sp|KCY_THEVO|CYTIDYLATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WLCKIMA 8
W+CKI +
Sbjct: 86 WICKIYS 92


>sp|RUBR_PYRAB|RUBREDOXIN abyssi (strain GE5 /

Query: 1 KWLCKIMAQI 10
KW CKI I
Sbjct: 3 KWRCKICGYI 12


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WLCKI 6
W+CK+
Sbjct: 500 WMCKV 504


>sp|TRPD_METBU|ANTHRANILATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 KWLCKIMAQI 10
K LC +MA++
Sbjct: 196 KDLCNLMAEV 205




322|Sequence|1606|1615|IMAQILTVKV

***** No hits found ******


323|Sequence|1611|1620|LTVKVEGCPK

>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LTVKVEGCPK 10
L KVEG PK
Sbjct: 826 LVEKVEGAPK 835


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 VKVEGCP 9
V V+GCP
Sbjct: 26 VVVDGCP 32


>sp|Y911_METJA|MAGNESIUM-CHELATASE subunit ChlI homolog|Methanocaldococcus jannaschii (strain ATCC

Query: 5 VEGCP 9
VEGCP
Sbjct: 62 VEGCP 66


>sp|Y790_THEKO|UPF0179 protein TK0790|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LTVKVEGCP 9
+T+K+E CP
Sbjct: 91 ITLKLEDCP 99


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 KVEGCPK 10
KVEG PK
Sbjct: 145 KVEGLPK 151


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 VEGCPK 10
+EGCP+
Sbjct: 118 IEGCPE 123


>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain ATCC

Query: 5 VEGCP 9
VEGCP
Sbjct: 188 VEGCP 192


>sp|AROC_METAR|CHORISMATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LTVKVEGCP 9
L V ++GCP
Sbjct: 23 LGVVIDGCP 31


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LTVKVEGC 8
LTVK GC
Sbjct: 507 LTVKGNGC 514


>sp|Y408_ARCFU|UNCHARACTERIZED protein AF_0408|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTVKVEGCPK 10
L +VEGC K
Sbjct: 156 LDEEVEGCEK 165


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 VEGCP 9
+EGCP
Sbjct: 120 IEGCP 124


>sp|DPO4_SULTO|DNA polymerase IV|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 KVEGCPK 10
K+EG PK
Sbjct: 275 KIEGIPK 281




324|Sequence|1616|1625|EGCPKHPKGI

>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 EGCPKHPK 8
EG P+HPK
Sbjct: 436 EGGPRHPK 443


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CPKHP 7
CPKHP
Sbjct: 469 CPKHP 473


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PKHPKGI 10
PKHPK I
Sbjct: 359 PKHPKTI 365


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 2 GCPKHPKGI 10
GCP HP I
Sbjct: 226 GCPAHPDWI 234


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 5 KHPKGI 10
KHPKG+
Sbjct: 175 KHPKGV 180


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 2 GCPKHPKG 9
GCP +P+G
Sbjct: 522 GCPNYPEG 529


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 5 KHPKGI 10
+HPKGI
Sbjct: 179 RHPKGI 184


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 GCPKHPKG 9
GCP +P G
Sbjct: 521 GCPNYPAG 528


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 1 EGCPKHPKGI 10
EG PK PK +
Sbjct: 509 EGRPKDPKAV 518


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 GCPKHPKG 9
GCP +P G
Sbjct: 521 GCPNYPAG 528


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 4 PKHPKGI 10
PKHPK +
Sbjct: 397 PKHPKDL 403


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GCPKHP 7
G PKHP
Sbjct: 514 GLPKHP 519


>sp|METAA_METII|HOMOSERINE O-acetyltransferase|Methanomassiliicoccus intestinalis (strain

Query: 2 GCPKHP 7
G PKHP
Sbjct: 154 GIPKHP 159


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 5 KHPKGI 10
KHPKG+
Sbjct: 175 KHPKGV 180


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EGCPKHPKGI 10
EG PK PK +
Sbjct: 509 EGRPKDPKAV 518


>sp|Y286_KORCO|UPF0282 protein Kcr_0286|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GCPKHPK 8
G P HPK
Sbjct: 41 GLPPHPK 47


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 5 KHPKGI 10
KHPKG+
Sbjct: 171 KHPKGM 176


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 EGCPKHPKGI 10
+G P P+GI
Sbjct: 434 DGIPPAPRGI 443


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGCPKHPKGI 10
+G P P+GI
Sbjct: 434 DGIPPAPRGI 443


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 1 EGCPKHPKGI 10
+G P P+GI
Sbjct: 434 DGIPPAPRGI 443


>sp|Y2141_ARCFU|UNCHARACTERIZED protein AF_2141|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EGCPKHPK 8
EGC PK
Sbjct: 12 EGCENRPK 19


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 5 KHPKG 9
KHPKG
Sbjct: 175 KHPKG 179


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 KHPKG 9
KHPKG
Sbjct: 175 KHPKG 179


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EGCPKHPKGI 10
+G P P+GI
Sbjct: 434 DGIPPAPRGI 443


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 KHPKG 9
KHPKG
Sbjct: 175 KHPKG 179


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 KHPKGI 10
+HPKG+
Sbjct: 177 RHPKGV 182


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 2 GCPKHPKG 9
GC HP G
Sbjct: 513 GCSNHPNG 520


>sp|PNPH_PYRFU|6-OXOPURINE nucleoside phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GCPKHPKG 9
G P HP+G
Sbjct: 151 GLPYHPRG 158


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 5 KHPKG 9
KHPKG
Sbjct: 175 KHPKG 179


>sp|TFE_PYRFU|TRANSCRIPTION factor E|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GCPKHPK 8
G P HPK
Sbjct: 119 GTPGHPK 125


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EGCPKHPK 8
E C HPK
Sbjct: 335 ERCRSHPK 342


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 5 KHPKGI 10
+HPKG+
Sbjct: 177 EHPKGV 182


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 1 EGCPKHPK 8
E C HPK
Sbjct: 335 ERCRSHPK 342


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 1 EGCPKHPK 8
E C HPK
Sbjct: 335 ERCRSHPK 342


>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GCPKHP 7
CP HP
Sbjct: 22 ACPHHP 27


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EGCPKHPK 8
E C HPK
Sbjct: 335 ERCRSHPK 342


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 2 GCPKHPKGI 10
GCP HP +
Sbjct: 226 GCPCHPDWV 234


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GCPKHPKG 9
GCPK K
Sbjct: 442 GCPKDKKA 449


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 1 EGCPKHPK 8
E C HPK
Sbjct: 335 ERCRSHPK 342


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 6 HPKGI 10
HPKGI
Sbjct: 209 HPKGI 213


>sp|KORB_ARCFU|2-OXOGLUTARATE synthase subunit KorB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GCPKHPK 8
GCP H +
Sbjct: 200 GCPTHQR 206


>sp|Y975_PYRAB|UPF0200 protein PYRAB09750|Pyrococcus abyssi (strain GE5 /

Query: 2 GCPKHPKGI 10
G PK P+G+
Sbjct: 42 GIPKTPEGL 50


>sp|Y1294_PYRFU|UPF0200 protein PF1294|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GCPKHPKGI 10
G PK P+G+
Sbjct: 42 GIPKTPEGL 50


>sp|RS6E_PYRCJ|SMALL ribosomal subunit protein eS6|Pyrobaculum calidifontis (strain

Query: 1 EGCPKHP 7
EG P HP
Sbjct: 64 EGAPMHP 70


>sp|Y1008_PYRHO|UPF0200 protein PH1008|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GCPKHPKGI 10
G PK P+G+
Sbjct: 42 GIPKTPEGL 50


>sp|RS6E_PYRAE|SMALL ribosomal subunit protein eS6|Pyrobaculum aerophilum (strain ATCC

Query: 1 EGCPKHP 7
EG P HP
Sbjct: 64 EGAPMHP 70


>sp|RS6E_PYRIL|SMALL ribosomal subunit protein eS6|Pyrobaculum islandicum (strain DSM

Query: 1 EGCPKHP 7
EG P HP
Sbjct: 64 EGAPMHP 70


>sp|RS6E_PYRNV|SMALL ribosomal subunit protein eS6|Pyrobaculum neutrophilum (strain

Query: 1 EGCPKHP 7
EG P HP
Sbjct: 64 EGAPMHP 70




325|Sequence|1621|1630|HPKGIISRRD

>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 HPKGIISRR 9
HPK ++SRR
Sbjct: 376 HPKVLMSRR 384


>sp|GGR_PYRHO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HPKGIISRR 9
HPK ++SRR
Sbjct: 376 HPKVLMSRR 384


>sp|RS8_SULAC|SMALL ribosomal subunit protein uS8|Sulfolobus acidocaldarius (strain

Query: 2 PKGIISRRD 10
PKG++S RD
Sbjct: 110 PKGVMSHRD 118


>sp|LYSZ_PYRCJ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 1 HPKGIISR 8
HP G++SR
Sbjct: 55 HPGGVVSR 62


>sp|LYSZ_PYRAR|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 1 HPKGIISR 8
HP G++SR
Sbjct: 55 HPGGLVSR 62


>sp|Y3501_METJA|UNCHARACTERIZED protein MJECL01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HPKGIISRR 9
HPK IIS R
Sbjct: 186 HPKLIISLR 194


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 HPKGIISRR 9
HP GI +RR
Sbjct: 226 HPIGITNRR 234


>sp|PGMI_PYRAE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum aerophilum

Query: 1 HPKGIIS 7
HPKG++S
Sbjct: 262 HPKGVLS 268


>sp|LYSZ_PYRAE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 1 HPKGIISR 8
HP G++SR
Sbjct: 55 HPGGLVSR 62


>sp|LYSZ_PYRNV|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 1 HPKGIISR 8
HP G++SR
Sbjct: 55 HPGGLVSR 62


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKGIISRRD 10
PK +I RRD
Sbjct: 113 PKPLIKRRD 121


>sp|YR33_THEPE|UNCHARACTERIZED 33.4 kDa protein in|Thermofilum pendens

Query: 2 PKGIISRRD 10
P+GI++ RD
Sbjct: 263 PRGIVTERD 271


>sp|Y2393_ARCFU|UNCHARACTERIZED protein AF_2393|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KGIISRRD 10
KG++ RRD
Sbjct: 72 KGVVVRRD 79


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HPKGIISRR 9
HPK ++S+R
Sbjct: 378 HPKVLMSKR 386


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HPKGIISRR 9
HPK ++S+R
Sbjct: 376 HPKVLMSKR 384


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 2 PKGIIS 7
PKGIIS
Sbjct: 184 PKGIIS 189


>sp|Y525_METKA|UNCHARACTERIZED protein MK0525|Methanopyrus kandleri (strain AV19 /

Query: 2 PKGIISRRD 10
P GII+ RD
Sbjct: 47 PIGIITERD 55


>sp|RS8_METBU|SMALL ribosomal subunit protein uS8|Methanococcoides burtonii (strain DSM

Query: 2 PKGIISR 8
PKG+IS+
Sbjct: 107 PKGVISQ 113


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 1 HPKGIISRR 9
HP G SRR
Sbjct: 330 HPLGYYSRR 338


>sp|NADK_THESM|NAD kinase|Thermococcus sibiricus (strain DSM 12597

Query: 4 GIISRRD 10
GI++RRD
Sbjct: 4 GIVARRD 10


>sp|Y1188_METJA|UNCHARACTERIZED protein MJ1188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HPKGIISRRD 10
H G+++R+D
Sbjct: 200 HISGVVNRKD 209


>sp|NADK_THEON|NAD kinase|Thermococcus onnurineus (strain NA1)

Query: 4 GIISRRD 10
GI++RRD
Sbjct: 4 GIVARRD 10


>sp|RS15_PYRAE|SMALL ribosomal subunit protein uS15|Pyrobaculum aerophilum (strain ATCC

Query: 1 HPKGIISRR 9
HPK + SRR
Sbjct: 105 HPKDMASRR 113


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HPKGIIS 7
HPKG+++
Sbjct: 234 HPKGVLT 240


>sp|Y949_METPE|UPF0179 protein Mpal_0949|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 HPKGIIS 7
HP G++S
Sbjct: 111 HPDGVVS 117


>sp|RS15_PYRCJ|SMALL ribosomal subunit protein uS15|Pyrobaculum calidifontis (strain DSM

Query: 1 HPKGIISRR 9
HPK + SRR
Sbjct: 105 HPKDMASRR 113


>sp|IMDH_KORCO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 GIISRRD 10
GI++RRD
Sbjct: 131 GIVTRRD 137


>sp|RS15_PYRIL|SMALL ribosomal subunit protein uS15|Pyrobaculum islandicum (strain DSM

Query: 1 HPKGIISRR 9
HPK + SRR
Sbjct: 105 HPKDMASRR 113


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 1 HPKGIIS 7
HPKG+++
Sbjct: 235 HPKGVLT 241


>sp|NADK_PYRFU|NAD kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GIISRRD 10
GI++RRD
Sbjct: 4 GIVARRD 10


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 1 HPKGIIS 7
HPKG+++
Sbjct: 234 HPKGVLT 240


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 GIISRRD 10
GI++RRD
Sbjct: 4 GIVARRD 10


>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GIISRRD 10
GI++RRD
Sbjct: 4 GIVARRD 10


>sp|NADK_PYRAB|NAD kinase|Pyrococcus abyssi (strain GE5 /

Query: 4 GIISRRD 10
GI++RRD
Sbjct: 4 GIVARRD 10


>sp|RNP3_THEGJ|RIBONUCLEASE P protein component 3|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HPKGIISR 8
HP+ ++SR
Sbjct: 206 HPRSLLSR 213




326|Sequence|1626|1635|ISRRDVEKFL

>sp|Y294_THEVO|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma

Query: 1 ISRRDVEKFL 10
++RRDVE+++
Sbjct: 37 VARRDVERYI 46


>sp|GGR_ARCFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ISRRDVEKFL 10
ISR +EKF
Sbjct: 46 ISRESIEKFF 55


>sp|Y1095_ARCFU|PUTATIVE antitoxin AF_1095|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ISRRDVEKFL 10
++ +D+EKFL
Sbjct: 49 LTEKDIEKFL 58


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 4 RDVEKFL 10
+DVEKFL
Sbjct: 103 KDVEKFL 109


>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ISRRDVEKFL 10
+SR D+E +L
Sbjct: 306 VSREDIEGYL 315


>sp|Y1380_METJA|PUTATIVE RNase MJ1380|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ISRRDVEKFL 10
+S+RDV+ FL
Sbjct: 1 MSKRDVKAFL 10


>sp|PSA_PYRHO|PROTEASOME subunit alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ISRRDVEKFL 10
+SR ++EK+L
Sbjct: 225 LSREEIEKYL 234


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ISRRDVEKFL 10
++RRDVE+ L
Sbjct: 378 VTRRDVERRL 387


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 1 ISRRDVEKF 9
I +RD+EK+
Sbjct: 55 IIQRDIEKY 63


>sp|CBIT_SACS2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 ISRRDVEKF 9
++RR+ EKF
Sbjct: 80 LTRRNAEKF 88


>sp|MFNA_METBF|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina barkeri (strain

Query: 4 RDVEKFL 10
RD+E+FL
Sbjct: 379 RDIEEFL 385


>sp|SYP_PYRIL|PROLINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ISRRDVEK 8
+ RRD+EK
Sbjct: 356 VGRRDIEK 363


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ISRRDVEK 8
I +RDVEK
Sbjct: 356 IGKRDVEK 363


>sp|CBIT_SACI7|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 ISRRDVEKF 9
++RR+ EKF
Sbjct: 80 LTRRNAEKF 88


>sp|CBIT_SACI6|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 ISRRDVEKF 9
++RR+ EKF
Sbjct: 80 LTRRNAEKF 88


>sp|CBIT_SACI4|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 ISRRDVEKF 9
++RR+ EKF
Sbjct: 80 LTRRNAEKF 88


>sp|CBIT_SACI3|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 ISRRDVEKF 9
++RR+ EKF
Sbjct: 80 LTRRNAEKF 88


>sp|CBIT_SACI2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 ISRRDVEKF 9
++RR+ EKF
Sbjct: 80 LTRRNAEKF 88


>sp|CBIT_SACI1|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 ISRRDVEKF 9
++RR+ EKF
Sbjct: 80 LTRRNAEKF 88


>sp|PGK2_THEKO|2-PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SRRDVEKFL 10
S+RD EK++
Sbjct: 232 SQRDAEKYV 240


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 1 ISRRDVEKF 9
++R+DVEK
Sbjct: 207 LTRKDVEKL 215




327|Sequence|1631|1640|VEKFLSKKRK

>sp|Y841_METTH|UNCHARACTERIZED transporter MTH_841|Methanothermobacter thermautotrophicus (strain

Query: 1 VEKFLSKKR 9
+ KFLS+KR
Sbjct: 224 LSKFLSRKR 232


>sp|UDP_THEKO|URIDINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VEKFLSKKR 9
VEKF+S +R
Sbjct: 2 VEKFVSAER 10


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 1 VEKFLSKKRK 10
+EK+LS+K+K
Sbjct: 29 MEKYLSEKKK 38


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 1 VEKFLSKK 8
VEKFLS+K
Sbjct: 170 VEKFLSEK 177


>sp|SRP54_ACIAM|SIGNAL recognition particle 54 kDa|Acidianus ambivalens (Desulfurolobus

Query: 1 VEKFLSKK 8
VEKFLS+K
Sbjct: 173 VEKFLSEK 180


>sp|MFNA_METPE|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaerula palustris

Query: 4 FLSKKRK 10
FLSKKR+
Sbjct: 14 FLSKKRE 20


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 2 EKFLSKKRK 10
EKFL KRK
Sbjct: 587 EKFLEIKRK 595


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 VEKFLSKK 8
VEK LSKK
Sbjct: 4 VEKILSKK 11


>sp|SRP54_METS5|SIGNAL recognition particle 54 kDa|Metallosphaera sedula (strain ATCC

Query: 1 VEKFLSKK 8
VEKFLS++
Sbjct: 171 VEKFLSER 178


>sp|PURP_PYRFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EKFLSKKRK 10
EKFL KRK
Sbjct: 156 EKFLGIKRK 164


>sp|RS3_METMJ|SMALL ribosomal subunit protein uS3|Methanoculleus marisnigri (strain

Query: 1 VEKFLSKKRK 10
VEKFL+K+ K
Sbjct: 17 VEKFLTKELK 26




328|Sequence|1636|1645|SKKRKFPKNY

>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 4 RKFPKN 9
RKFPKN
Sbjct: 176 RKFPKN 181


>sp|Y834_METJA|UNCHARACTERIZED protein MJ0834|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KKRKFPKNY 10
K KFPKNY
Sbjct: 64 KMYKFPKNY 72


>sp|HEM3_METTH|PROBABLE porphobilinogen deaminase|Methanothermobacter thermautotrophicus

Query: 3 KRKFPKNY 10
KR+FP Y
Sbjct: 176 KRRFPVEY 183


>sp|ASPD_ARCFU|L-ASPARTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RKFPKN 9
+KFPKN
Sbjct: 155 QKFPKN 160


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 5 KFPKNY 10
+FPKNY
Sbjct: 395 QFPKNY 400


>sp|RNZ_SACI6|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SKKRKFP 7
SKKRK P
Sbjct: 15 SKKRKLP 21


>sp|RNZ_SACI4|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SKKRKFP 7
SKKRK P
Sbjct: 15 SKKRKLP 21


>sp|RNZ_SACI3|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 SKKRKFP 7
SKKRK P
Sbjct: 15 SKKRKLP 21


>sp|RNZ_SACS2|RIBONUCLEASE Z|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SKKRKFP 7
SKKRK P
Sbjct: 15 SKKRKLP 21


>sp|RNZ_SACI7|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SKKRKFP 7
SKKRK P
Sbjct: 15 SKKRKLP 21


>sp|RNZ_SACI2|RIBONUCLEASE Z|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SKKRKFP 7
SKKRK P
Sbjct: 15 SKKRKLP 21


>sp|RNZ_SACI1|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SKKRKFP 7
SKKRK P
Sbjct: 15 SKKRKLP 21




329|Sequence|1641|1650|FPKNYMSQYF

>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 1 FPKNYMSQYF 10
PKNY + F
Sbjct: 135 LPKNYTQEMF 144


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 3 KNYMSQYF 10
KN+ +QYF
Sbjct: 243 KNFSNQYF 250


>sp|RL3_THESM|LARGE ribosomal subunit protein uL3|Thermococcus sibiricus (strain DSM

Query: 1 FPKNYMSQYF 10
PKNY + F
Sbjct: 130 LPKNYTEEVF 139


>sp|HJE_SULAC|CROSSOVER junction endodeoxyribonuclease Hje|Sulfolobus acidocaldarius

Query: 1 FPKNYMSQYF 10
F +NY+SQ+
Sbjct: 116 FLENYISQFL 125


>sp|Y3538_METJA|UNCHARACTERIZED protein MJECL38|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NYMSQYF 10
NY+S YF
Sbjct: 47 NYLSAYF 53


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KNYMSQY 9
NY+SQY
Sbjct: 765 TNYLSQY 771




330|Sequence|1646|1655|MSQYFKLLEK

>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 MSQYFKLLEK 10
MSQYF+L +
Sbjct: 22 MSQYFELTRR 31


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 MSQYFKLLEK 10
MSQYF+L +
Sbjct: 22 MSQYFELTRR 31


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 1 MSQYFKLLEK 10
MS+Y L+EK
Sbjct: 346 MSEYLDLIEK 355


>sp|CDC62_HALSA|ORC1-TYPE DNA replication protein 2|Halobacterium salinarum (strain ATCC

Query: 2 SQYFKLLEK 10
S+Y+KLL K
Sbjct: 138 SKYYKLLWK 146


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 2 SQYFKLLEK 10
S+Y+KLL K
Sbjct: 138 SKYYKLLWK 146


>sp|PGP_METAC|PHOSPHOGLYCOLATE phosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MSQYFKL 7
+S+YFKL
Sbjct: 92 LSEYFKL 98




331|Sequence|1651|1660|KLLEKFQIAL

>sp|VHCD_METVO|F420-NON-REDUCING hydrogenase vhc iron-sulfur subunit|Methanococcus voltae

Query: 4 EKFQIAL 10
EKFQIA+
Sbjct: 114 EKFQIAM 120


>sp|FTRL_METTM|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter marburgensis

Query: 3 LEKFQIAL 10
LEKFQ+ L
Sbjct: 82 LEKFQVEL 89


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KLLEKFQI 8
+LLEKF++
Sbjct: 313 RLLEKFEV 320


>sp|RS9_HALMA|SMALL ribosomal subunit protein uS9|Haloarcula marismortui (strain ATCC

Query: 1 KLLEKFQIA 9
K+LE F+IA
Sbjct: 43 KMLEPFRIA 51


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KLLEKFQI 8
K+L++FQI
Sbjct: 31 KILQRFQI 38


>sp|KAE1_PYRCJ|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum

Query: 1 KLLEKFQIAL 10
KL+E+F ++L
Sbjct: 65 KLIEEFNVSL 74


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KLLEKFQIA 9
K+LEKF +
Sbjct: 86 KMLEKFNVG 94


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 1 KLLEKFQIA 9
K+LEKF +
Sbjct: 86 KMLEKFNVG 94


>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KLLEKFQI 8
K LEKFQ+
Sbjct: 19 KALEKFQL 26


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 2 LLEKFQIA 9
L EKFQ+A
Sbjct: 391 LKEKFQVA 398




332|Sequence|1656|1665|FQIALPIGEE

>sp|Y360_METJA|UNCHARACTERIZED protein MJ0360|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FQIALPIGEE 10
F+I PIGEE
Sbjct: 109 FKIIGPIGEE 118


>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 4 ALPIGEE 10
ALP GEE
Sbjct: 56 ALPTGEE 62


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 1 FQIALPIGEE 10
+ I LPIG++
Sbjct: 380 YTITLPIGDD 389


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 ALPIGEE 10
LP+GEE
Sbjct: 163 GLPVGEE 169


>sp|Y1056_PYRAR|UPF0282 protein Pars_1056|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 LPIGEE 10
LP+GEE
Sbjct: 4 LPVGEE 9


>sp|Y3680_PYRAE|UPF0282 protein PAE3680|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 LPIGEE 10
LP+GEE
Sbjct: 4 LPVGEE 9


>sp|GLKA_PYRHO|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus horikoshii (strain ATCC

Query: 3 IALPIGEE 10
+A+PIGE+
Sbjct: 391 LAVPIGEQ 398




333|Sequence|1661|1670|PIGEEYLLVP

>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PIGEEYLLVP 10
PI E Y+ VP
Sbjct: 408 PIAERYMFVP 417


>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PIGEEYLLVP 10
P+GE++ L P
Sbjct: 65 PLGEKFFLTP 74


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGEEYLLVP 10
+GEE +LVP
Sbjct: 112 LGEERVLVP 120


>sp|CSG_METVO|S-LAYER protein|Methanococcus voltae

Query: 2 IGEEYLLV 9
+GEEY LV
Sbjct: 250 LGEEYALV 257


>sp|Y1060_METJA|UNCHARACTERIZED protein MJ1060|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PIGEEYLLVP 10
PI E+Y +P
Sbjct: 352 PISEKYSCIP 361


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 PIGEEYLLVP 10
P GE L++P
Sbjct: 559 PAGERSLVIP 568


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 1 PIGEEYLLVP 10
P GE L++P
Sbjct: 559 PAGERSLVIP 568


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PIGEEYLLVP 10
P+GE +VP
Sbjct: 410 PVGEHTFVVP 419


>sp|NTPTH_PYRFU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PIGEEYLLVP 10
P+GE Y L P
Sbjct: 145 PLGEYYWLTP 154


>sp|NTPTH_PYRHO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PIGEEYLLVP 10
P+GE Y L P
Sbjct: 142 PLGEYYWLTP 151


>sp|DHQS_HALWD|3-DEHYDROQUINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IGEEYLLVP 10
IGE++ ++P
Sbjct: 150 IGEDWTIIP 158


>sp|TYW31_PYRHO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 IGEEYL 7
+GEEYL
Sbjct: 161 VGEEYL 166


>sp|TYW31_PYRFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 IGEEYL 7
+GEEYL
Sbjct: 161 VGEEYL 166


>sp|MTAD_HALWD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IGEEYL 7
+GEEYL
Sbjct: 201 VGEEYL 206


>sp|MTAD_HALSA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Halobacterium salinarum (strain ATCC 700922

Query: 2 IGEEYL 7
+GEEYL
Sbjct: 188 VGEEYL 193


>sp|MTAD_HALMA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IGEEYL 7
+GEEYL
Sbjct: 189 VGEEYL 194


>sp|RSAMH_PYRHO|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GEEYLLVP 10
G++YL+VP
Sbjct: 82 GDQYLVVP 89


>sp|CBIX_ARCFU|SIROHYDROCHLORIN cobaltochelatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIGEEYLLV 9
PIGE+Y +
Sbjct: 106 PIGEDYFVT 114


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 PIGEEYLLVP 10
P GE L+VP
Sbjct: 542 PAGERDLIVP 551


>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 IGEEYLL 8
IGE+YLL
Sbjct: 80 IGEKYLL 86


>sp|PGK2_METM5|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 IGEEYLL 8
IGE+YLL
Sbjct: 80 IGEKYLL 86


>sp|PGK2_METM6|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 IGEEYLL 8
IGE+YLL
Sbjct: 80 IGEKYLL 86


>sp|RS4E_PYRAE|SMALL ribosomal subunit protein eS4|Pyrobaculum aerophilum (strain ATCC

Query: 1 PIGEEYLLVP 10
P GE Y +VP
Sbjct: 90 PTGEVYRVVP 99


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PIGEEYLLVP 10
P GE L++P
Sbjct: 541 PAGERDLIIP 550


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 1 PIGEEYLLVP 10
P GE Y +VP
Sbjct: 90 PTGEVYRVVP 99


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 1 PIGEEYLLV 9
PI EEY +V
Sbjct: 404 PISEEYTVV 412


>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 PIGEEYLLV 9
P GEEYL++
Sbjct: 54 PPGEEYLIL 62


>sp|RS4E_PYRNV|SMALL ribosomal subunit protein eS4|Pyrobaculum neutrophilum (strain

Query: 1 PIGEEYLLVP 10
P GE Y +VP
Sbjct: 90 PTGEIYRVVP 99


>sp|RS4E_PYRIL|SMALL ribosomal subunit protein eS4|Pyrobaculum islandicum (strain DSM

Query: 1 PIGEEYLLVP 10
P GE Y +VP
Sbjct: 90 PTGEIYRVVP 99




334|Sequence|1666|1675|YLLVPSSLSD

>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 1 YLLVPSSL 8
Y+L+PS L
Sbjct: 71 YVLIPSGL 78


>sp|PRIL_HALSA|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 1 YLLVPSSLSD 10
YLL+ SSL D
Sbjct: 147 YLLLASSLRD 156


>sp|PRIL_HALS3|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 1 YLLVPSSLSD 10
YLL+ SSL D
Sbjct: 147 YLLLASSLRD 156




335|Sequence|1671|1680|SSLSDHRPVI

>sp|KDPA_METB6|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Methanoregula boonei (strain DSM

Query: 2 SLSDHRPV 9
+L DHRP+
Sbjct: 537 TLQDHRPL 544


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 1 SSLSDHRPV 9
SSL HRPV
Sbjct: 214 SSLPPHRPV 222


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 SSLSDHRPV 9
S +SD RPV
Sbjct: 658 SVISDRRPV 666


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SSLSDHRPV 9
S +SD RPV
Sbjct: 658 SVISDRRPV 666


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SSLSDHRPV 9
S +SD RPV
Sbjct: 658 SVISDRRPV 666


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SSLSDHRPV 9
S +SD RPV
Sbjct: 658 SVISDRRPV 666


>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide

Query: 2 SLSDHRPVI 10
S + HRPVI
Sbjct: 76 SANTHRPVI 84




336|Sequence|1676|1685|HRPVIELPHC

>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 2 RPVIELPHC 10
+PVI +P C
Sbjct: 219 KPVINIPGC 227


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 2 RPVIELPHC 10
+PVI +P C
Sbjct: 219 KPVINIPGC 227


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 2 RPVIELP 8
RPV+E+P
Sbjct: 39 RPVVEIP 45


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 2 RPVIELPH 9
RPVI PH
Sbjct: 126 RPVIVKPH 133


>sp|PURP_PYRAB|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 RPVIELPH 9
RPVI PH
Sbjct: 130 RPVIVKPH 137


>sp|MVK_PYRAB|MEVALONATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 HRPVIELP 8
H P +ELP
Sbjct: 181 HLPFVELP 188


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 RPVIELPHC 10
R V+ELP C
Sbjct: 421 RYVVELPWC 429


>sp|MVK_THESM|MEVALONATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 PVIELP 8
PV+ELP
Sbjct: 181 PVVELP 186


>sp|IF6_NATPD|TRANSLATION initiation factor 6|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PVIELP 8
PV+ELP
Sbjct: 88 PVVELP 93


>sp|RS4E_AERPE|SMALL ribosomal subunit protein eS4|Aeropyrum pernix (strain ATCC 700893

Query: 2 RPVIELP 8
RPVI LP
Sbjct: 242 RPVISLP 248


>sp|KAE1_THEON|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus onnurineus

Query: 1 HRPVIELPHC 10
++P+I + HC
Sbjct: 99 NKPIIGVNHC 108


>sp|KAE1B_METS3|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 HRPVIELPHC 10
++P+I + HC
Sbjct: 103 NKPIIGVNHC 112


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 HRPVIELPHC 10
++P+I + HC
Sbjct: 105 NKPIIGVNHC 114


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 HRPVIELPHC 10
++P+I + HC
Sbjct: 104 NKPIIGVNHC 113


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 HRPVIELPHC 10
++P+I + HC
Sbjct: 104 NKPIIGVNHC 113


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 HRPVIELPHC 10
++P+I + HC
Sbjct: 104 NKPIIGVNHC 113


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 RPVIELPHC 10
+P+I + HC
Sbjct: 105 KPIIGVNHC 113


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 RPVIELPHC 10
+P+I + HC
Sbjct: 99 KPIIGVNHC 107


>sp|HYPA_METS3|HYDROGENASE maturation factor HypA|Methanobrevibacter smithii (strain ATCC

Query: 1 HRPVIELPHC 10
+ P++E P C
Sbjct: 90 YAPIVECPKC 99


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro

Query: 2 RPVIELP 8
+PV+E+P
Sbjct: 39 KPVVEIP 45


>sp|DTDA_THEVO|D-AMINOACYL-TRNA deacylase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HRPVIELPH 9
H P+ +LP+
Sbjct: 130 HGPIFDLPN 138


>sp|KAE1_THESM|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus sibiricus

Query: 1 HRPVIELPHC 10
++P++ + HC
Sbjct: 99 NKPIVGVNHC 108


>sp|KAE1_THEKO|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus kodakarensis

Query: 1 HRPVIELPHC 10
++P++ + HC
Sbjct: 99 NKPIVGVNHC 108


>sp|KAE1_THEGJ|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus

Query: 1 HRPVIELPHC 10
++P++ + HC
Sbjct: 99 NKPIVGVNHC 108


>sp|KAE1_PYRHO|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus horikoshii

Query: 1 HRPVIELPHC 10
++P++ + HC
Sbjct: 99 NKPIVGVNHC 108


>sp|KAE1_PYRFU|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus furiosus

Query: 1 HRPVIELPHC 10
++P++ + HC
Sbjct: 99 NKPIVGVNHC 108


>sp|RL1_KORCO|LARGE ribosomal subunit protein uL1|Korarchaeum cryptofilum (strain

Query: 4 VIELPH 9
V+ELPH
Sbjct: 52 VVELPH 57


>sp|RS19_METS3|SMALL ribosomal subunit protein uS19|Methanobrevibacter smithii (strain

Query: 2 RPVIELPHC 10
RPV+ HC
Sbjct: 63 RPVVIRTHC 71


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 HRPVIELPH 9
H +ELPH
Sbjct: 83 HVKALELPH 91


>sp|RS10_SULAC|SMALL ribosomal subunit protein uS10|Sulfolobus acidocaldarius (strain

Query: 3 PVIELPH 9
PV+ LPH
Sbjct: 49 PVMRLPH 55




337|Sequence|1681|1690|ELPHCENSEI

>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ELPHCENSEI 10
E+P+CEN ++
Sbjct: 123 EIPYCENDKL 132


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 ELPHCENSEI 10
ELP+CE ++
Sbjct: 123 ELPYCERDKL 132


>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 2 LPHCENSE 9
LPH EN E
Sbjct: 171 LPHPENEE 178


>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PHCENSEI 10
PH ENS I
Sbjct: 24 PHLENSNI 31


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LPHCENSEI 10
LP+CE +I
Sbjct: 124 LPYCERDKI 132


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ELPHCENSEI 10
E+P+CE +I
Sbjct: 123 EIPYCEYDKI 132


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELPHCENSEI 10
E+P+CE ++
Sbjct: 123 EIPYCEKDKL 132


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PHCEN 7
PHCEN
Sbjct: 178 PHCEN 182


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ELPHCENSEI 10
+LP EN+EI
Sbjct: 75 DLPIVENAEI 84


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELPHCENSE 9
E+P CE++E
Sbjct: 429 EVPWCESNE 437


>sp|AROD_METS3|3-DEHYDROQUINATE dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LPHCENS 8
L HCEN+
Sbjct: 164 LSHCENT 170


>sp|AMZA_HALWD|ARCHAEMETZINCIN walsbyi (strain DSM 16790

Query: 2 LPHCENSE 9
L HC+NS+
Sbjct: 138 LEHCDNSK 145


>sp|AMZA_NATPD|ARCHAEMETZINCIN pharaonis (strain ATCC 35678

Query: 2 LPHCENS 8
L HC+NS
Sbjct: 138 LEHCDNS 144


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 PHCENSE 9
PHCE +
Sbjct: 147 PHCEEEQ 153


>sp|AMZA_AERPE|ARCHAEMETZINCIN pernix (strain ATCC 700893

Query: 2 LPHCENSE 9
L HC N E
Sbjct: 140 LDHCSNRE 147


>sp|Y949_METPE|UPF0179 protein Mpal_0949|Methanosphaerula palustris (strain ATCC

Query: 1 ELPHCENSEI 10
ELP CE ++
Sbjct: 27 ELPACEQCKV 36


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 PHCENSE 9
PHCE +
Sbjct: 147 PHCEEEQ 153




338|Sequence|1686|1695|ENSEIIIRLY

>sp|Y304_ARCFU|UNCHARACTERIZED protein AF_0304|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SEIIIRLY 10
+EII+R+Y
Sbjct: 81 AEIIVRIY 88




339|Sequence|1691|1700|IIRLYEMPYF

>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 IRLYEMPY 9
+R YE+PY
Sbjct: 313 LRRYEVPY 320


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 2 IRLYEMPY 9
+R YE+PY
Sbjct: 313 LRKYEVPY 320


>sp|OTC_SULAC|ORNITHINE carbamoyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IIRLYEMPY 9
II YE PY
Sbjct: 206 IIEFYEDPY 214


>sp|BIOB_META3|BIOTIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 LYEMPYF 10
L+E+PY+
Sbjct: 27 LWELPYY 33


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IIRLYEMPY 9
II YE PY
Sbjct: 206 IIEFYEDPY 214


>sp|PSB2_AERPE|PROTEASOME subunit beta 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 IRLYEM 7
IRLYEM
Sbjct: 88 IRLYEM 93


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina mazei

Query: 2 IRLYEMP 8
+RLYE P
Sbjct: 272 VRLYEKP 278


>sp|NADK_PICTO|NAD kinase|Picrophilus torridus (strain ATCC 700027

Query: 3 RLYEMPYF 10
RLYE YF
Sbjct: 145 RLYENNYF 152


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 5 YEMPY 9
YEMPY
Sbjct: 541 YEMPY 545


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 IIRLYEMPYF 10
I R Y+MP F
Sbjct: 445 ISRKYKMPMF 454


>sp|EPPA_METJA|PREPILIN peptidase EppA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IRLYEMPY 9
I +YE+PY
Sbjct: 144 INIYEIPY 151




340|Sequence|1696|1705|EMPYFPMGFW

>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 MPYFPMGFW 10
MP +P GFW
Sbjct: 229 MPTYPSGFW 237


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EMPYFPMGFW 10
E P F M FW
Sbjct: 328 EYPVFTMVFW 337


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 EMPYFPM 7
E+PY+P+
Sbjct: 367 EVPYYPL 373


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 1 EMPYFPMG 8
+MP++P G
Sbjct: 221 KMPFYPKG 228


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 1 EMPYFPMG 8
+MP++P G
Sbjct: 221 QMPFYPPG 228


>sp|NASC_HALMT|PROBABLE molybdenum cofactor guanylyltransferase|Haloferax mediterranei

Query: 1 EMPYFPMGF 9
+MP P GF
Sbjct: 111 DMPLVPTGF 119


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 MPYFPM 7
+PY+PM
Sbjct: 230 VPYYPM 235


>sp|Y1566_METJA|UNCHARACTERIZED protein MJ1566|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FPMGFW 10
FP+ FW
Sbjct: 415 FPLEFW 420


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 FPMGF 9
FPMGF
Sbjct: 83 FPMGF 87


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 FPMGF 9
FPMGF
Sbjct: 83 FPMGF 87


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 3 PYFPMG 8
P+FP+G
Sbjct: 208 PFFPIG 213


>sp|FWDD_METJA|PROTEIN FwdD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MPYFPMGFW 10
M Y PMG W
Sbjct: 75 MIYIPMGPW 83


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 5 FPMGF 9
FPMGF
Sbjct: 80 FPMGF 84


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EMPYFPMGFW 10
E P F + FW
Sbjct: 336 ENPVFTLVFW 345


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 FPMGF 9
FPMGF
Sbjct: 69 FPMGF 73


>sp|Y771_ARCFU|UNCHARACTERIZED protein AF_0771|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FPMGFW 10
FP+ FW
Sbjct: 151 FPLSFW 156


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 FPMGF 9
FPMGF
Sbjct: 80 FPMGF 84


>sp|Y236_THEAC|PROTEIN Ta0236|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PYFPMG 8
PY+P+G
Sbjct: 74 PYYPLG 79


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 FPMGF 9
FPMGF
Sbjct: 44 FPMGF 48




341|Sequence|1701|1710|PMGFWSRLIN

>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PMGFWSRLIN 10
P+G W RL++
Sbjct: 129 PIGSWGRLVS 138


>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PMGFWSRLIN 10
P+G W RL++
Sbjct: 129 PIGSWGRLVS 138


>sp|SPEE_THEVO|POLYAMINE aminopropyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PMGFWSRLI 9
P GFWS I
Sbjct: 227 PSGFWSFTI 235


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PMGFWS 6
P GFWS
Sbjct: 233 PSGFWS 238


>sp|SPEE_THEAC|POLYAMINE aminopropyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PMGFWS 6
P GFWS
Sbjct: 227 PSGFWS 232


>sp|RL3_NANEQ|LARGE ribosomal subunit protein uL3|Nanoarchaeum equitans (strain

Query: 2 MGFWSR 7
MGFW R
Sbjct: 14 MGFWPR 19


>sp|KHK_HALVD|KETOHEXOKINASE volcanii (strain ATCC 29605

Query: 2 MGFWSRL 8
MG+WS +
Sbjct: 183 MGYWSEM 189


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 PMGFWSRLIN 10
P+ FW LIN
Sbjct: 371 PLDFWEWLIN 380


>sp|SRP54_ARCFU|SIGNAL recognition particle 54 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 1 PMGFWSRLI 9
P GF SRL+
Sbjct: 277 PAGFVSRLL 285


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 1 PMGFWSRLI 9
P+G++SR +
Sbjct: 331 PLGYYSRRV 339


>sp|NPD_HALMA|NAD-DEPENDENT protein deacetylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PMGFWS 6
P GFW+
Sbjct: 70 PAGFWA 75


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 1 PMGFWSRLI 9
P GF SRL+
Sbjct: 281 PSGFISRLL 289


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 1 PMGFWSRLI 9
P GF SRL+
Sbjct: 281 PSGFISRLL 289


>sp|SRP54_HALLT|SIGNAL recognition particle 54 kDa|Halorubrum lacusprofundi (strain ATCC

Query: 1 PMGFWSRLI 9
P GF SRL+
Sbjct: 281 PSGFISRLL 289


>sp|DAPF_METTP|DIAMINOPIMELATE epimerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GFWSRL 8
GFW+R+
Sbjct: 117 GFWARV 122


>sp|Y761_METJA|UNCHARACTERIZED metal-dependent hydrolase MJ0761|Methanocaldococcus jannaschii

Query: 5 WSRLIN 10
W RLIN
Sbjct: 47 WDRLIN 52


>sp|CORA_METJA|COBALT/MAGNESIUM transport protein CorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PMGFW 5
P GFW
Sbjct: 290 PQGFW 294




342|Sequence|1706|1715|SRLINRLLEI

>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 2 RLINRLLEI 10
RLINR LEI
Sbjct: 176 RLINRWLEI 184


>sp|RS7_NATPD|SMALL ribosomal subunit protein uS7|Natronomonas pharaonis (strain ATCC

Query: 2 RLINRLLE 9
RLINRL++
Sbjct: 70 RLINRLMQ 77


>sp|RS7_HALWD|SMALL ribosomal subunit protein uS7|Haloquadratum walsbyi (strain DSM

Query: 2 RLINRLLE 9
RLINRL++
Sbjct: 94 RLINRLMQ 101


>sp|RS7_HALMO|SMALL ribosomal subunit protein uS7|Halococcus morrhuae (Micrococcus

Query: 2 RLINRLLE 9
RLINRL++
Sbjct: 70 RLINRLMQ 77


>sp|RS7_HALMA|SMALL ribosomal subunit protein uS7|Haloarcula marismortui (strain ATCC

Query: 2 RLINRLLE 9
RLINRL++
Sbjct: 73 RLINRLMQ 80


>sp|RS7_METLZ|SMALL ribosomal subunit protein uS7|Methanocorpusculum labreanum

Query: 2 RLINRLLE 9
RLINRL++
Sbjct: 61 RLINRLMQ 68


>sp|RS7_METB6|SMALL ribosomal subunit protein uS7|Methanoregula boonei (strain DSM

Query: 2 RLINRLLE 9
RLINRL++
Sbjct: 71 RLINRLMQ 78


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 SRLINRLLEI 10
+R+IN LLEI
Sbjct: 52 NRIINGLLEI 61


>sp|AROE_SACI6|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SRLINRLLEI 10
+R+IN LLEI
Sbjct: 52 NRIINGLLEI 61


>sp|AROE_SACI4|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 1 SRLINRLLEI 10
+R+IN LLEI
Sbjct: 52 NRIINGLLEI 61


>sp|AROE_SACI3|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.27)

Query: 1 SRLINRLLEI 10
+R+IN LLEI
Sbjct: 52 NRIINGLLEI 61


>sp|AROE_SACI2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain L.S.2.15

Query: 1 SRLINRLLEI 10
+R+IN LLEI
Sbjct: 52 NRIINGLLEI 61


>sp|AROE_SACI1|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 SRLINRLLEI 10
+R+IN LLEI
Sbjct: 52 NRIINGLLEI 61


>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 1 SRLINRLLEI 10
+ ++NRLL+I
Sbjct: 184 AEIVNRLLKI 193


>sp|SYN_PYRHO|ASPARAGINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RLINRLLE 9
+L+NR+LE
Sbjct: 370 KLLNRILE 377


>sp|SYN_PYRFU|ASPARAGINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RLINRLLE 9
+L+NR+LE
Sbjct: 370 KLLNRILE 377


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain

Query: 4 INRLLEI 10
INRL+EI
Sbjct: 53 INRLMEI 59


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SRLINRLLE 9
++L+N+LLE
Sbjct: 257 TQLVNKLLE 265


>sp|PSTB_AERPE|PHOSPHATE import ATP-binding protein PstB|Aeropyrum pernix (strain ATCC

Query: 2 RLINRLLEI 10
R+INRL+++
Sbjct: 49 RVINRLIDL 57


>sp|PSTB_SACS2|PHOSPHATE import ATP-binding protein PstB|Saccharolobus solfataricus

Query: 2 RLINRLLEI 10
+++NRL+EI
Sbjct: 54 KVLNRLIEI 62




343|Sequence|1711|1720|RLLEISPYML

>sp|AATD_SULAC|A-TYPE ATP synthase subunit D|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LEISPYML 10
LEISPY+L
Sbjct: 121 LEISPYIL 128


>sp|DNLI_THEFM|DNA ligase|Thermococcus fumicolans

Query: 2 LLEISPYML 10
LLEI PY++
Sbjct: 37 LLEIVPYLI 45


>sp|DNLI_THEKO|DNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LLEISPYML 10
LLEI PY++
Sbjct: 37 LLEIVPYLI 45


>sp|DNLI_THEON|DNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 LLEISPYML 10
LLE+ PY++
Sbjct: 40 LLEVVPYLI 48


>sp|Y1076_ARCFU|UNCHARACTERIZED protein AF_1076|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLEISPYM 9
L+EI+PY+
Sbjct: 27 LMEITPYV 34


>sp|RNP3_PYRAB|RIBONUCLEASE P protein component 3|Pyrococcus abyssi (strain GE5 /

Query: 2 LLEISPY 8
LLE SPY
Sbjct: 135 LLEASPY 141




344|Sequence|1716|1725|SPYMLSGRER

>sp|CH60_METHJ|CHAPERONIN GroEL|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SPYMLSGRER 10
SPYM++ +ER
Sbjct: 200 SPYMVTDQER 209


>sp|AATD_SULAC|A-TYPE ATP synthase subunit D|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SPYMLSGRER 10
SPY+L RE+
Sbjct: 124 SPYILKSREQ 133


>sp|PURQ_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Picrophilus torridus (strain ATCC 700027

Query: 2 PYMLSGRER 10
PY +SG ER
Sbjct: 222 PYQMSGNER 230


>sp|DAPAL_PYRHO|UNCHARACTERIZED DapA-like lyase PH0847|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PYMLSGRE 9
PYM+ G E
Sbjct: 270 PYMMDGEE 277


>sp|NADK_METMJ|NAD kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SPYMLSGR 8
+PYMLS R
Sbjct: 196 APYMLSSR 203


>sp|NADK_METLZ|NAD kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SPYMLSGR 8
+PYMLS R
Sbjct: 197 APYMLSSR 204


>sp|NADK_METPE|NAD kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 SPYMLSGR 8
+PYMLS R
Sbjct: 196 APYMLSSR 203


>sp|Y4021_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 SPYMLSGRER 10
SP+ LSG E+
Sbjct: 144 SPHTLSGGEK 153


>sp|MTHK_METTH|CALCIUM-GATED potassium channel MthK|Methanothermobacter thermautotrophicus

Query: 1 SPYMLSGR 8
SP+++SGR
Sbjct: 230 SPFVISGR 237


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 SPYMLSGRER 10
+P+MLSG ++
Sbjct: 139 APHMLSGGQK 148


>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 PYMLSGRER 10
PY LSG E+
Sbjct: 141 PYNLSGGEK 149


>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 2 PYMLSGRER 10
PY LSG E+
Sbjct: 138 PYHLSGGEK 146


>sp|TSR3_METMA|16S rRNA aminocarboxypropyltransferase|Methanosarcina mazei (strain

Query: 2 PYMLSG 7
PYML+G
Sbjct: 97 PYMLAG 102


>sp|TSR3_METAC|16S rRNA aminocarboxypropyltransferase|Methanosarcina acetivorans

Query: 2 PYMLSG 7
PYML+G
Sbjct: 98 PYMLAG 103




345|Sequence|1721|1730|SGRERALRPN

>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SGRERALRP 9
+GRE ALRP
Sbjct: 70 AGREVALRP 78


>sp|SYH_METJA|HISTIDINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GRERALRP 9
GRE ALRP
Sbjct: 72 GREMALRP 79


>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SGRERALRP 9
SGR+ ALRP
Sbjct: 69 SGRDLALRP 77


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 GRERALR 8
GRERAL+
Sbjct: 304 GRERALK 310


>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GRERALRP 9
GRE ALRP
Sbjct: 70 GRELALRP 77


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 GRERALRPN 10
GR+ ALRP+
Sbjct: 69 GRDVALRPD 77


>sp|SYH_METMA|HISTIDINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GRERALRP 9
GRE LRP
Sbjct: 70 GREMTLRP 77


>sp|DNLI_METBU|DNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SGRERALRPN 10
SGRE L+P+
Sbjct: 504 SGREIELKPD 513


>sp|Y1200_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB12000|Pyrococcus abyssi (strain GE5 /

Query: 3 RERALRP 9
RER LRP
Sbjct: 300 RERKLRP 306


>sp|GUAAA_IGNH4|GMP synthase [glutamine-hydrolyzing] subunit A|Ignicoccus hospitalis

Query: 2 GRERALRP 9
G E ALRP
Sbjct: 25 GHEAALRP 32


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 GRERALRP 9
GR+ ALRP
Sbjct: 69 GRDLALRP 76


>sp|SYH_METKA|HISTIDINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 GRERALRPN 10
GR+ ALRP
Sbjct: 75 GRKLALRPE 83




346|Sequence|1726|1735|ALRPNRMYWR

>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 3 RPNRMYWR 10
+ NR++WR
Sbjct: 395 KSNRLFWR 402


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 RPNRMY 8
RPNR+Y
Sbjct: 170 RPNRIY 175


>sp|RL3_METAC|LARGE ribosomal subunit protein uL3|Methanosarcina acetivorans (strain

Query: 1 ALRPNRMYWR 10
A P+R+ WR
Sbjct: 240 AFNPSRVSWR 249


>sp|Y3058_HALWD|PUTATIVE HTH-type transcriptional regulatory protein|Haloquadratum walsbyi

Query: 2 LRPNRMYWR 10
L+PN +Y+R
Sbjct: 85 LKPNVVYFR 93


>sp|RL10E_METJA|LARGE ribosomal subunit protein uL16|Methanocaldococcus jannaschii

Query: 1 ALRPNRMY 8
+LRPNR Y
Sbjct: 3 SLRPNRCY 10


>sp|TRET_PYRHO|TREHALOSE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PNRMYW 9
PNR +W
Sbjct: 160 PNREFW 165


>sp|RL34_HYPBU|LARGE ribosomal subunit protein eL34|Hyperthermus butylicus (strain DSM

Query: 1 ALRPNRMYW 9
A RP RMY
Sbjct: 62 AKRPERMYG 70


>sp|RL39_THESM|LARGE ribosomal subunit protein eL39|Thermococcus sibiricus (strain DSM

Query: 4 PNRMYWR 10
P R YWR
Sbjct: 39 PKRRYWR 45


>sp|RL39_PYRFU|LARGE ribosomal subunit protein eL39|Pyrococcus furiosus (strain ATCC

Query: 4 PNRMYWR 10
P R YWR
Sbjct: 39 PKRRYWR 45




347|Sequence|1731|1740|RMYWRQGIYL

>sp|PDXT_METAR|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanocella arvoryzae (strain

Query: 1 RMYWRQGI 8
R+ WR+GI
Sbjct: 56 RLAWREGI 63


>sp|Y685_PYRNV|UPF0201 protein Tneu_0685|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 WRQGI 8
WRQGI
Sbjct: 60 WRQGI 64


>sp|Y593_PYRCJ|UPF0201 protein Pcal_0593|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 WRQGI 8
WRQGI
Sbjct: 60 WRQGI 64


>sp|Y1985_PYRAR|UPF0201 protein Pars_1985|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 WRQGI 8
WRQGI
Sbjct: 60 WRQGI 64


>sp|Y1658_PYRIL|UPF0201 protein Pisl_1658|Pyrobaculum islandicum (strain DSM 4184

Query: 4 WRQGI 8
WRQGI
Sbjct: 60 WRQGI 64


>sp|PYRB_METTH|ASPARTATE carbamoyltransferase catalytic subunit|Methanothermobacter

Query: 2 MYWRQGIY 9
MY+RQ Y
Sbjct: 280 MYFRQAFY 287


>sp|Y1632_PYRAE|UPF0201 protein PAE1632|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 WRQGI 8
WRQGI
Sbjct: 60 WRQGI 64


>sp|SUCD2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Archaeoglobus fulgidus (strain

Query: 1 RMYWR 5
+MYWR
Sbjct: 107 KMYWR 111


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 3 YWRQGIYL 10
YW QG+ L
Sbjct: 416 YWTQGMPL 423


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 WRQGIYL 10
WR IYL
Sbjct: 87 WRDDIYL 93


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 WRQGIYL 10
WR IYL
Sbjct: 88 WRDDIYL 94


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 WRQGIYL 10
WR IYL
Sbjct: 87 WRDDIYL 93


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 WRQGIYL 10
WR IYL
Sbjct: 87 WRDDIYL 93


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 WRQGIYL 10
WR IYL
Sbjct: 88 WRDDIYL 94


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 WRQGIYL 10
WR IYL
Sbjct: 87 WRDDIYL 93


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 WRQGIYL 10
WR IYL
Sbjct: 88 WRDDIYL 94


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 WRQGIYL 10
WR+ +YL
Sbjct: 90 WREDLYL 96


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 WRQGIYL 10
WR IYL
Sbjct: 88 WRDDIYL 94


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 RMYWRQGIYL 10
+ Y +QGIY+
Sbjct: 182 KFYQKQGIYV 191


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 WRQGIYL 10
WR+ +YL
Sbjct: 91 WREDLYL 97


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 WRQGIYL 10
WR+ +YL
Sbjct: 90 WREDLYL 96


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RMYWRQGIYL 10
+ Y +QGIY+
Sbjct: 182 KFYQKQGIYV 191


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 WRQGIYL 10
WR+ +YL
Sbjct: 90 WREDLYL 96


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 WRQGIYL 10
WR+ +YL
Sbjct: 90 WREDLYL 96


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 WRQGIYL 10
WR+ +YL
Sbjct: 90 WREDLYL 96


>sp|ILVC_PYRNV|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum neutrophilum (strain DSM

Query: 2 MYWRQGIY 9
+ W++GIY
Sbjct: 238 LIWQRGIY 245


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 4 WRQGIYL 10
WR+ +YL
Sbjct: 89 WREDVYL 95


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 WRQGIYL 10
WR+ +YL
Sbjct: 90 WREDLYL 96


>sp|ILVC_PYRIL|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum islandicum (strain DSM 4184

Query: 2 MYWRQGIY 9
+ W++GIY
Sbjct: 238 LIWQRGIY 245


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 3 YWRQGIY 9
YW G+Y
Sbjct: 826 YWDYGLY 832


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 1 RMYWRQGIY 9
++ WR G+Y
Sbjct: 19 QIRWRNGVY 27


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 RMYWRQGIYL 10
+ Y +QGIY+
Sbjct: 182 KFYKKQGIYV 191


>sp|ILVC_PYRAE|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum aerophilum (strain ATCC

Query: 2 MYWRQGIY 9
+ W++GIY
Sbjct: 238 LIWQRGIY 245


>sp|Y637_PYRHO|UPF0111 protein PH0637|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 WRQGIYL 10
W+ G+Y+
Sbjct: 193 WKDGLYI 199


>sp|ILVC_PYRAR|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum arsenaticum (strain DSM

Query: 2 MYWRQGIY 9
+ W++GIY
Sbjct: 238 LIWQRGIY 245


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 WRQGIYL 10
WR+ +YL
Sbjct: 89 WREDLYL 95


>sp|ILVC_PYRCJ|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum calidifontis (strain DSM

Query: 2 MYWRQGIY 9
+ W++GIY
Sbjct: 238 LIWQRGIY 245




348|Sequence|1736|1745|QGIYLNWSPE

>sp|LEU1_SULTO|2-ISOPROPYLMALATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QGIYLN 6
QGIYLN
Sbjct: 341 QGIYLN 346


>sp|GLCAE_SACS2|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 IYLNW 7
IYLNW
Sbjct: 4 IYLNW 8


>sp|Y2048_ARCFU|UNCHARACTERIZED protein AF_2048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YLNWSP 9
Y+NW+P
Sbjct: 50 YVNWTP 55


>sp|Y593_PYRFU|UPF0282 protein PF0593|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QGIYLNWSPE 10
+GIY + SPE
Sbjct: 84 EGIYESSSPE 93


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 YLNWSPE 10
Y+ W PE
Sbjct: 366 YIPWEPE 372


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IYLNWSP 9
IY+ WSP
Sbjct: 353 IYICWSP 359


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 4 YLNWSPE 10
YL WS E
Sbjct: 447 YLKWSQE 453


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 LNWSPE 10
+NW PE
Sbjct: 491 INWCPE 496


>sp|Y1029_THESM|UPF0282 protein TSIB_1029|Thermococcus sibiricus (strain DSM 12597

Query: 1 QGIYLNWSPE 10
+GIY + SPE
Sbjct: 84 EGIYESSSPE 93


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 5 LNWSPE 10
+NW+PE
Sbjct: 430 VNWTPE 435


>sp|Y1661_ARCFU|UNCHARACTERIZED protein AF_1661|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GIYLNWSP 9
GIY W+P
Sbjct: 212 GIYWEWTP 219


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 QGIYLNWSPE 10
+G+ +W PE
Sbjct: 47 EGVSKSWMPE 56




349|Sequence|1741|1750|NWSPEAYCLV

>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 1 NWSPEAYCLV 10
+WSPEA+ L+
Sbjct: 94 DWSPEAFELI 103


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 1 NWSPEAYCLV 10
+W+PEA+ L+
Sbjct: 94 DWNPEAFELI 103


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 2 WSPEA 6
WSPEA
Sbjct: 456 WSPEA 460


>sp|Y1579_ARCFU|UNCHARACTERIZED protein AF_1579|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PEAYCLV 10
P A+CLV
Sbjct: 167 PSAFCLV 173


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 2 WSPEAYC 8
W P YC
Sbjct: 378 WYPTVYC 384


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 1 NWSPEAYCLV 10
+WS +AY L+
Sbjct: 94 DWSDDAYGLI 103


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NWSPEAYCLV 10
N PEAY ++
Sbjct: 141 NIDPEAYAMI 150


>sp|GLCDH_HALMA|GLUCOSE 1-dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 1 NWSPEAYCLV 10
+W P++ C++
Sbjct: 170 DWRPDSACVL 179


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NWSPEAYCL 9
NW PE L
Sbjct: 123 NWEPEVVLL 131


>sp|BIOB_NITMS|BIOTIN synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 5 EAYCLV 10
E+YCLV
Sbjct: 109 ESYCLV 114


>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NWSPEAY 7
+W P+AY
Sbjct: 234 SWLPDAY 240




350|Sequence|1746|1755|AYCLVGSEVL

>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YCLVGSEVL 10
YC GSE++
Sbjct: 431 YCRCGSEIV 439


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CLVGSEVL 10
C++GSEV+
Sbjct: 49 CVLGSEVI 56


>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 CLVGSEVL 10
CL G EVL
Sbjct: 8 CLTGGEVL 15


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YCLVGSEVL 10
Y +VGSE++
Sbjct: 285 YSMVGSEIV 293


>sp|RSAMH_METJA|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YCLVGSEVL 10
Y +VG+E+L
Sbjct: 142 YAVVGAEIL 150


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YCLVGSEVL 10
YC G+EV+
Sbjct: 432 YCRCGAEVV 440


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YCLVGSEVL 10
YC G+EV+
Sbjct: 427 YCRCGNEVV 435


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YCLVGSEVL 10
YC G+EV+
Sbjct: 425 YCRCGNEVV 433


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 YCLVGSEVL 10
YC G+EV+
Sbjct: 437 YCRCGNEVV 445


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YCLVGSE 8
YCL+G +
Sbjct: 388 YCLIGGK 394




351|Sequence|1751|1760|GSEVLDNHPE

>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GSEVLDNH 8
GSEVLD+H
Sbjct: 265 GSEVLDHH 272


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GSEVLDNH 8
GSEVLD+H
Sbjct: 265 GSEVLDHH 272


>sp|CS2H_ACIS1|CARBON disulfide hydrolase|Acidianus sp. (strain A1-3)

Query: 1 GSEVLDNHP 9
G E+L NHP
Sbjct: 154 GVEILRNHP 162


>sp|APGM1_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EVLDNHP 9
EVL+NHP
Sbjct: 199 EVLENHP 205


>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 3 EVLDNHP 9
E+LD+HP
Sbjct: 215 EILDSHP 221


>sp|Y1537_METJA|UNCHARACTERIZED protein MJ1537|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSEVLDNHPE 10
G E++ N+PE
Sbjct: 207 GKEIIKNNPE 216


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SEVLDNHP 9
+EVLD HP
Sbjct: 186 AEVLDAHP 193


>sp|APGM_METLZ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanocorpusculum labreanum (strain ATCC

Query: 2 SEVLDNHP 9
+E+L NHP
Sbjct: 203 AEILKNHP 210


>sp|CS2H_SACS2|CARBON disulfide hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SEVLDNHP 9
+E+L NHP
Sbjct: 155 AEILKNHP 162


>sp|Y482_METM7|UPF0280 protein MmarC7_0482|Methanococcus maripaludis (strain C7 /

Query: 3 EVLDNHPE 10
EVLDN P+
Sbjct: 57 EVLDNAPK 64


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GSEVLDNHPE 10
G+EV+ HP+
Sbjct: 148 GAEVVRQHPD 157


>sp|APGM_THEKO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus kodakarensis (strain ATCC

Query: 3 EVLDNHP 9
EVLD HP
Sbjct: 200 EVLDKHP 206


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 EVLDNHPE 10
++LD HPE
Sbjct: 19 QMLDKHPE 26


>sp|APGM_PYRFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EVLDNHP 9
EVLD HP
Sbjct: 200 EVLDKHP 206


>sp|RL35A_METKA|LARGE ribosomal subunit protein eL33|Methanopyrus kandleri (strain AV19

Query: 1 GSEVLDNHPE 10
G EV+ HPE
Sbjct: 42 GKEVIWKHPE 51


>sp|PGK_PYRHO|PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SEVLDNHPE 10
SE+LD H E
Sbjct: 77 SELLDQHVE 85


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GSEVLDNHP 9
GS++ D HP
Sbjct: 451 GSDIGDPHP 459


>sp|APGM_METMJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanoculleus marisnigri (strain ATCC

Query: 3 EVLDNHP 9
E+LD HP
Sbjct: 204 EILDGHP 210


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 5 LDNHPE 10
LD+HPE
Sbjct: 202 LDHHPE 207


>sp|RS4_METVS|SMALL ribosomal subunit protein uS4|Methanococcus vannielii (strain ATCC

Query: 5 LDNHPE 10
L+NHPE
Sbjct: 163 LENHPE 168


>sp|MTRH_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanothermobacter marburgensis

Query: 1 GSEVLDNHP 9
G+E +++HP
Sbjct: 297 GTEAVEDHP 305


>sp|MOBB_METJA|PUTATIVE molybdopterin-guanine dinucleotide biosynthesis

Query: 1 GSEVLDNH 8
GS+++D+H
Sbjct: 116 GSDLIDDH 123


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 SEVLDNHPE 10
+E+L+ HP+
Sbjct: 170 TEILEKHPK 178


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SEVLDNHPE 10
+EV+D+ PE
Sbjct: 272 TEVIDDFPE 280


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SEVLDNHPE 10
+E+L+ HP+
Sbjct: 170 TEILEKHPK 178


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 3 EVLDNHPE 10
EVLD PE
Sbjct: 553 EVLDKEPE 560


>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 VLDNHPE 10
+LD HPE
Sbjct: 21 LLDGHPE 27


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SEVLDNH 8
SEVL NH
Sbjct: 539 SEVLSNH 545


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 3 EVLDNHPE 10
EVL+ HP+
Sbjct: 171 EVLEKHPK 178


>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GSEVLDNH 8
G EVL++H
Sbjct: 11 GGEVLEDH 18


>sp|PHS_SACS2|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Saccharolobus

Query: 2 SEVLDNHPE 10
++ LD+HP+
Sbjct: 49 ADALDHHPD 57


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 3 EVLDNHPE 10
EVL+ HP+
Sbjct: 171 EVLEKHPK 178




352|Sequence|1756|1765|DNHPESFLKI

>sp|Y910_METJA|UNCHARACTERIZED protein MJ0910|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DNHPESFLKI 10
D P+SF+KI
Sbjct: 129 DTEPQSFIKI 138


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DNHPESFLKI 10
D+H E+F+K+
Sbjct: 52 DHHAETFIKL 61


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DNHPESFLKI 10
D+H E+F+K+
Sbjct: 52 DHHAETFVKL 61


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DNHPESFLKI 10
D+H E+F+K+
Sbjct: 52 DHHAETFVKL 61


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DNHPESFLKI 10
D+H E+F+K+
Sbjct: 53 DHHAETFVKL 62


>sp|RS4_METJA|SMALL ribosomal subunit protein uS4|Methanocaldococcus jannaschii (strain

Query: 1 DNHPE 5
DNHPE
Sbjct: 165 DNHPE 169


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DNHPESFLKI 10
D+H E+F+K+
Sbjct: 52 DHHAETFVKL 61


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 2 NHPESFLKI 10
NHPE K+
Sbjct: 486 NHPEELKKV 494


>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 DNHPESFLKI 10
D HPE +I
Sbjct: 38 DRHPEKLKRI 47


>sp|CARA_SULAC|CARBAMOYL phosphate synthase small chain|Sulfolobus acidocaldarius (strain

Query: 2 NHPESFLK 9
N+PE +LK
Sbjct: 151 NNPEEYLK 158


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DNHPESFLKI 10
D+H E+F K+
Sbjct: 46 DHHAETFPKL 55


>sp|Y1057_METJA|UNCHARACTERIZED glycosyltransferase MJ1057|Methanocaldococcus jannaschii (strain

Query: 2 NHPESFLK 9
N PE +LK
Sbjct: 18 NEPEKYLK 25




353|Sequence|1761|1770|SFLKITVPSC

>sp|DNAG_METVS|DNA primase DnaG|Methanococcus vannielii (strain ATCC 35089

Query: 1 SFLKITVPS 9
SF KIT+PS
Sbjct: 66 SFAKITLPS 74


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 1 SFLKITVPS 9
SF KIT+PS
Sbjct: 66 SFAKITLPS 74


>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 1 SFLKITVPS 9
SF KIT+PS
Sbjct: 66 SFAKITLPS 74


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 1 SFLKITVPS 9
SF KIT+PS
Sbjct: 66 SFAKITLPS 74


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 1 SFLKITVPS 9
SF KIT+PS
Sbjct: 66 SFAKITLPS 74


>sp|RS27_METB6|SMALL ribosomal subunit protein eS27|Methanoregula boonei (strain DSM

Query: 1 SFLKITVPSC 10
SFLK+ P C
Sbjct: 11 SFLKVKCPDC 20


>sp|DNAG_METJA|DNA primase DnaG|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SFLKITVPS 9
S KITVPS
Sbjct: 69 SIAKITVPS 77


>sp|RS27_METLZ|SMALL ribosomal subunit protein eS27|Methanocorpusculum labreanum

Query: 2 FLKITVPSC 10
FLK+ P C
Sbjct: 12 FLKVKCPDC 20


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 2 FLKITVPSC 10
F+K+ P C
Sbjct: 211 FVKVNYPKC 219


>sp|RS27_METMJ|SMALL ribosomal subunit protein eS27|Methanoculleus marisnigri (strain

Query: 1 SFLKITVPSC 10
+FL++ P C
Sbjct: 11 TFLRVKCPDC 20




354|Sequence|1766|1775|TVPSCRKGCI

>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 1 TVPSCRKGC 9
+V CR+GC
Sbjct: 187 SVTGCREGC 195


>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 PSCRKG 8
P CRKG
Sbjct: 75 PDCRKG 80


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 SCRKGC 9
+CR GC
Sbjct: 369 ACRNGC 374


>sp|GLCDH_METS5|GLUCOSE 1-dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VPSCRKGC 9
VP R+GC
Sbjct: 85 VPVVRRGC 92




355|Sequence|1771|1780|RKGCILLGQV

>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 2 KGCILLG 8
KGCI+LG
Sbjct: 314 KGCIILG 320


>sp|NRPR1_METMA|GLOBAL nitrogen regulator NrpRI|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GCILLGQV 10
GCI LG++
Sbjct: 264 GCITLGEI 271


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 RKGCILLGQ 9
R+GCI+ G+
Sbjct: 390 REGCIIEGE 398


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 3 GCILLGQV 10
GC+LL Q+
Sbjct: 118 GCVLLSQM 125


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 3 GCILLG 8
GC+LLG
Sbjct: 476 GCLLLG 481


>sp|Y939_METJA|UNCHARACTERIZED protein MJ0939|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KGCILL 7
KGC+LL
Sbjct: 64 KGCVLL 69


>sp|PTFC_HALVD|PTS system fructose-specific EIIC component|Haloferax volcanii (strain

Query: 3 GCILLGQV 10
CILLG +
Sbjct: 344 ACILLGSI 351


>sp|UPP_PYRAR|URACIL phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM

Query: 1 RKGCILLGQV 10
RKG + LG++
Sbjct: 29 RKGLVRLGRI 38


>sp|UPP_HALMA|URACIL phosphoribosyltransferase|Haloarcula marismortui (strain ATCC

Query: 1 RKGCILLGQV 10
RKG + LG++
Sbjct: 35 RKGLVRLGRI 44


>sp|Y1219_METJA|UNCHARACTERIZED protein MJ1219|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GCILLG 8
GC+LLG
Sbjct: 18 GCVLLG 23


>sp|UPP_HALWD|URACIL phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RKGCILLGQV 10
RKG + LG++
Sbjct: 35 RKGLVKLGRI 44


>sp|UPP_HALSA|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 RKGCILLGQV 10
RKG + LG++
Sbjct: 35 RKGLVKLGRI 44


>sp|UPP_HALS3|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 RKGCILLGQV 10
RKG + LG++
Sbjct: 35 RKGLVKLGRI 44


>sp|UPP_HALLT|URACIL phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 RKGCILLGQV 10
RKG + LG++
Sbjct: 35 RKGLVKLGRI 44


>sp|UPP_PYRAE|URACIL phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC

Query: 1 RKGCILLGQV 10
RKG + LG++
Sbjct: 29 RKGLVRLGRI 38




356|Sequence|1776|1785|LLGQVVDHID

>sp|PYRI_METJA|ASPARTATE carbamoyltransferase regulatory chain|Methanocaldococcus

Query: 3 GQVVDHID 10
G V+DHID
Sbjct: 15 GTVIDHID 22


>sp|PYRI_CENSY|ASPARTATE carbamoyltransferase regulatory chain|Cenarchaeum symbiosum

Query: 3 GQVVDHID 10
G V+DHID
Sbjct: 14 GTVIDHID 21


>sp|PYRI_METB6|ASPARTATE carbamoyltransferase regulatory chain|Methanoregula boonei

Query: 3 GQVVDHID 10
G V+DHID
Sbjct: 25 GTVIDHID 32


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 2 LGQVVDHID 10
LG+V+DH++
Sbjct: 168 LGKVIDHVN 176


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LGQVVDHID 10
LG+V+DH++
Sbjct: 168 LGKVIDHVN 176


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LGQVVDHID 10
LG+V+DH++
Sbjct: 168 LGKVIDHVN 176


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 LGQVVDHID 10
LG+V+DH++
Sbjct: 168 LGKVIDHVN 176


>sp|PYRI_NITMS|ASPARTATE carbamoyltransferase regulatory chain|Nitrosopumilus maritimus

Query: 3 GQVVDHID 10
G V+DHID
Sbjct: 14 GTVIDHID 21


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina

Query: 3 GQVVDHID 10
G V+DH+D
Sbjct: 39 GNVMDHLD 46


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LLGQVVDHI 9
LLG VV+H+
Sbjct: 248 LLGMVVEHL 256


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LLGQVVDHI 9
LLG VV+H+
Sbjct: 248 LLGMVVEHL 256


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 LGQVVDHID 10
LG+++DH++
Sbjct: 168 LGKLIDHVN 176


>sp|PYRI_METVS|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus vannielii

Query: 3 GQVVDHID 10
G V+DHI+
Sbjct: 13 GTVIDHIE 20


>sp|PYRI_ARCFU|ASPARTATE carbamoyltransferase regulatory chain|Archaeoglobus fulgidus

Query: 3 GQVVDHID 10
G V+DHI+
Sbjct: 12 GTVIDHIN 19


>sp|Y294_THEVO|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma volcanium

Query: 1 LLGQVVDHID 10
L +VDHID
Sbjct: 179 LKADIVDHID 188


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 2 LGQVVDHID 10
LG+++DH++
Sbjct: 168 LGKLIDHVN 176


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LGQVVDHID 10
LGQ ++H+D
Sbjct: 96 LGQTLNHLD 104


>sp|PYRI_THEPD|ASPARTATE carbamoyltransferase regulatory chain|Thermofilum pendens (strain

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_THEKO|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus kodakarensis

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_THEGJ|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus gammatolerans

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 12 GTVIDHI 18


>sp|PYRI_SULAC|ASPARTATE carbamoyltransferase regulatory chain|Sulfolobus acidocaldarius

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 18 GTVIDHI 24


>sp|PYRI_PYRNV|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum neutrophilum

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_PYRIL|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum islandicum

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_PYRHO|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus horikoshii

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 12 GTVIDHI 18


>sp|PYRI_PYRFU|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus furiosus (strain

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 12 GTVIDHI 18


>sp|PYRI_PYRCJ|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum calidifontis

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_PYRAR|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum arsenaticum

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_PYRAE|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum aerophilum

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_PYRAB|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus abyssi (strain

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 12 GTVIDHI 18


>sp|PYRI_METMP|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_METM6|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_METM5|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_METHJ|ASPARTATE carbamoyltransferase regulatory chain|Methanospirillum hungatei

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 18 GTVIDHI 24


>sp|PYRI_METBF|ASPARTATE carbamoyltransferase regulatory chain|Methanosarcina barkeri

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 15 GTVIDHI 21


>sp|PYRI_METAC|ASPARTATE carbamoyltransferase regulatory chain|Methanosarcina acetivorans

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 15 GTVIDHI 21


>sp|PYRI_KORCO|ASPARTATE carbamoyltransferase regulatory chain|Korarchaeum cryptofilum

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_METM7|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_METTH|ASPARTATE carbamoyltransferase regulatory chain|Methanothermobacter

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 17 GTVIDHI 23


>sp|PYRI_THEON|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus onnurineus

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 12 GTVIDHI 18


>sp|PYRI_METMA|ASPARTATE carbamoyltransferase regulatory chain|Methanosarcina mazei

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 15 GTVIDHI 21


>sp|PYRI_METS5|ASPARTATE carbamoyltransferase regulatory chain|Metallosphaera sedula

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 16 GTVIDHI 22


>sp|PYRI_METS3|ASPARTATE carbamoyltransferase regulatory chain|Methanobrevibacter smithii

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 17 GTVIDHI 23


>sp|PYRI_META3|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus aeolicus

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 20 GTVIDHI 26


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LGQVVDHID 10
LG+V+D+I+
Sbjct: 168 LGRVIDNIN 176


>sp|PYRI_THEVO|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma volcanium

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 14 GTVIDHI 20


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 LLGQVVDHID 10
L+G +++HI+
Sbjct: 767 LIGAIMEHIE 776


>sp|PYRI_PICTO|ASPARTATE carbamoyltransferase regulatory chain|Picrophilus torridus

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 13 GTVIDHI 19


>sp|PYRI_THESM|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus sibiricus

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 12 GTVIDHI 18


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 LLGQVVDHID 10
L+G +++HI+
Sbjct: 767 LIGAIMEHIE 776


>sp|APGM_PYRFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLGQVVDHID 10
++ +VDH+D
Sbjct: 325 MIKYIVDHVD 334


>sp|AATE_METS5|A-TYPE ATP synthase subunit E|Metallosphaera sedula (strain ATCC 51363

Query: 1 LLGQVVD 7
L+GQV+D
Sbjct: 7 LMGQVID 13


>sp|RL10_NATPD|LARGE ribosomal subunit protein uL10|Natronomonas pharaonis (strain

Query: 2 LGQVVDHID 10
LG++V+H++
Sbjct: 77 LGELVEHVE 85


>sp|PYRI_SULTO|ASPARTATE carbamoyltransferase regulatory chain|Sulfurisphaera tokodaii

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 17 GTVIDHI 23


>sp|PYRI_SACI7|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 18 GTVIDHI 24


>sp|PYRI_SACI6|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 18 GTVIDHI 24


>sp|PYRI_SACI4|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 18 GTVIDHI 24


>sp|PYRI_SACI3|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 18 GTVIDHI 24


>sp|PYRI_SACI2|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 18 GTVIDHI 24


>sp|PYRI_SACI1|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 18 GTVIDHI 24


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 LLGQVVDHID 10
L+G +++HI+
Sbjct: 769 LIGAIMEHIE 778


>sp|APGM_PYRAB|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 LLGQVVDHID 10
++G ++D+ID
Sbjct: 324 MIGYIIDNID 333


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 LLGQVVDHID 10
L+G V++HI+
Sbjct: 756 LIGGVMEHIE 765


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 LLGQVVDHID 10
L+G +++HI+
Sbjct: 303 LIGAIMEHIE 312


>sp|PYRI_HYPBU|ASPARTATE carbamoyltransferase regulatory chain|Hyperthermus butylicus

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 15 GTVIDHI 21


>sp|PYRI_METMJ|ASPARTATE carbamoyltransferase regulatory chain|Methanoculleus marisnigri

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 18 GTVIDHI 24


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LLGQVVDHI 9
+LG VV+H+
Sbjct: 248 ILGMVVEHL 256


>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLGQVVDHID 10
LLG+ V++ID
Sbjct: 82 LLGKRVEYID 91


>sp|CP119_SULAC|CYTOCHROME P450 119|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LLGQVVDHID 10
L+G V DH++
Sbjct: 171 LIGYVKDHLN 180


>sp|PYRI_METTP|ASPARTATE carbamoyltransferase regulatory chain|Methanothrix

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 14 GTVIDHI 20


>sp|PYRI_SACS2|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus solfataricus

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 18 GTVIDHI 24


>sp|PYRI_METPE|ASPARTATE carbamoyltransferase regulatory chain|Methanosphaerula palustris

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 18 GTVIDHI 24


>sp|PYRI_METAR|ASPARTATE carbamoyltransferase regulatory chain|Methanocella arvoryzae

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 15 GTVIDHI 21


>sp|PYRI_METLZ|ASPARTATE carbamoyltransferase regulatory chain|Methanocorpusculum

Query: 3 GQVVDHI 9
G V+DHI
Sbjct: 17 GTVIDHI 23


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 1 LLGQVVD 7
LLGQ+VD
Sbjct: 186 LLGQLVD 192




357|Sequence|1781|1790|VDHIDSLMEE

>sp|ARGB_METAC|ACETYLGLUTAMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VDHIDSLMEE 10
+D IDSL+EE
Sbjct: 232 LDQIDSLIEE 241


>sp|Y195_METB6|PUTATIVE HTH-type transcriptional regulatory protein|Methanoregula boonei

Query: 1 VDHIDSLMEE 10
V HIDS+ EE
Sbjct: 48 VTHIDSVSEE 57


>sp|Y2548_METHJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanospirillum

Query: 1 VDHIDSLMEE 10
+ HIDS+ EE
Sbjct: 48 ISHIDSISEE 57


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 2 DHIDSLMEE 10
D IDS++EE
Sbjct: 142 DEIDSVLEE 150


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 VDHIDSLMEE 10
V+ +DS+ME+
Sbjct: 299 VEEVDSVMEK 308


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 VDHIDSLMEE 10
+DH+ +L+EE
Sbjct: 237 LDHLYALLEE 246


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 1 VDHIDSLMEE 10
+DH+ MEE
Sbjct: 51 IDHLKKQMEE 60


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VDHIDSLMEE 10
++H D+L++E
Sbjct: 355 LEHFDNLLKE 364


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VDHIDSLME 9
V H+D+L+E
Sbjct: 219 VSHVDNLIE 227


>sp|PGK2_PYRAB|2-PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 VDHIDSLME 9
+ H+D +ME
Sbjct: 241 ISHLDEIME 249


>sp|PGK2_PYRFU|2-PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VDHIDSLME 9
+ H+D +ME
Sbjct: 241 ISHLDEIME 249




358|Sequence|1786|1795|SLMEEWFPGL

>sp|SYS_METST|SERINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 MEEWFPG 9
+E WFPG
Sbjct: 335 LEAWFPG 341


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 MEEWFPGL 10
M +WFPG+
Sbjct: 351 MFQWFPGV 358


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC

Query: 3 MEEWFP 8
ME+WFP
Sbjct: 10 MEKWFP 15


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 3 MEEWFPGL 10
++EW P L
Sbjct: 269 LDEWLPNL 276


>sp|RS5_METTH|SMALL ribosomal subunit protein uS5|Methanothermobacter

Query: 3 MEEWFP 8
MEEW P
Sbjct: 7 MEEWEP 12


>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 MEEWFP 8
+E WFP
Sbjct: 47 IERWFP 52


>sp|RS3_IGNH4|SMALL ribosomal subunit protein uS3|Ignicoccus hospitalis (strain

Query: 2 LMEEWF 7
++EEWF
Sbjct: 73 VLEEWF 78


>sp|SURE_ARCFU|5'-NUCLEOTIDASE SurE|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LMEEWFPGL 10
++E WF GL
Sbjct: 249 IVEGWFDGL 257


>sp|CAS1_METKA|CRISPR-ASSOCIATED endonuclease Cas1|Methanopyrus kandleri (strain AV19 /

Query: 2 LMEEW 6
LMEEW
Sbjct: 234 LMEEW 238


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 3 MEEWFP 8
+E+WFP
Sbjct: 10 IEKWFP 15


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 3 MEEWFP 8
+E WFP
Sbjct: 10 LERWFP 15


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 5 EWFPGL 10
EW+PG
Sbjct: 317 EWWPGF 322


>sp|CAS1_KORCO|CRISPR-ASSOCIATED endonuclease Cas1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 SLMEEW 6
S+MEEW
Sbjct: 186 SIMEEW 191


>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SLMEEWFP 8
S EWFP
Sbjct: 363 SYESEWFP 370




359|Sequence|1791|1800|WFPGLLEIDI

>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 1 WFPGLLEIDI 10
W PG +IDI
Sbjct: 60 WLPGQRDIDI 69


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 WFPGLLEIDI 10
W PG +IDI
Sbjct: 58 WLPGQRDIDI 67


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WFPGLLEIDI 10
W PG +IDI
Sbjct: 60 WLPGQRDIDI 69


>sp|RIFK_HALWD|RIBOFLAVIN kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 FPGLLEIDI 10
FPG L ID+
Sbjct: 134 FPGTLNIDL 142


>sp|RIFK_NATPD|RIBOFLAVIN kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FPGLLEIDI 10
FPG L +D+
Sbjct: 133 FPGTLNVDL 141


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 1 WFPGLLEIDI 10
W PG ++D+
Sbjct: 59 WLPGASDVDV 68


>sp|RIFK_STAMF|RIBOFLAVIN kinase|Staphylothermus marinus (strain ATCC 43588

Query: 2 FPGLLEIDI 10
+PG L IDI
Sbjct: 36 YPGTLNIDI 44


>sp|CBID_ARCFU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FPGLLEI 8
FPGLL+I
Sbjct: 254 FPGLLKI 260


>sp|GLNB1_METTM|NITROGEN fixation nifHD region GlnB-like|Methanothermobacter marburgensis

Query: 2 FPGLLEIDI 10
FP L +ID+
Sbjct: 25 FPALTKIDV 33


>sp|Y1567_ARCFU|UNCHARACTERIZED protein AF_1567|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WFPGLLEID 9
WF G E+D
Sbjct: 267 WFEGKYELD 275


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 1320 LPGLLELE 1327


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 3 PGLLEIDI 10
PG+ E+DI
Sbjct: 110 PGIAELDI 117


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 1495 LPGLLELE 1502


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 571 LPGLLELE 578


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 1464 LPGLLELE 1471


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 1502 LPGLLELE 1509


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 1629 LPGLLELE 1636


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 1109 LPGLLELE 1116


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 571 LPGLLELE 578


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 571 LPGLLELE 578


>sp|RIFK_HALSA|RIBOFLAVIN kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FPGLLEIDI 10
+PG L +D+
Sbjct: 135 YPGTLNVDL 143


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 571 LPGLLELE 578


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 571 LPGLLELE 578


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 572 LPGLLELE 579


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 572 LPGLLELE 579


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 2 FPGLLEID 9
PGLLE++
Sbjct: 572 LPGLLELE 579


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 WFPGLLEI 8
W+ G+L+I
Sbjct: 19 WYNGMLQI 26




360|Sequence|1796|1805|LEIDICGEGE

>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 2 EIDICGEGE 10
E+D+CG+GE
Sbjct: 509 EVDVCGDGE 517


>sp|IDI2_AERPE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LEIDICG 7
LEID CG
Sbjct: 49 LEIDFCG 55


>sp|Y1255_METJA|UNCHARACTERIZED glycosyltransferase MJ1255|Methanocaldococcus jannaschii (strain

Query: 3 IDICGEG 9
I +CGEG
Sbjct: 5 ISVCGEG 11


>sp|PRIS_METJA|DNA primase small subunit PriS|Methanocaldococcus jannaschii (strain

Query: 1 LEIDICGE 8
EI+ICG+
Sbjct: 314 FEIEICGK 321


>sp|CHEB_PYRAB|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus abyssi

Query: 2 EIDICGEG 9
E+++CGE
Sbjct: 32 ELEVCGEA 39


>sp|SURE1_PYRAE|5'-NUCLEOTIDASE SurE 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EIDICG 7
E+D+CG
Sbjct: 55 EVDLCG 60


>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus

Query: 2 EIDICGEG 9
E+++CGE
Sbjct: 32 ELEVCGEA 39


>sp|TRPD_NITMS|ANTHRANILATE phosphoribosyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 IDICGEG 9
ID+CG G
Sbjct: 77 IDMCGTG 83


>sp|Y1357_DESA1|MEMO1 family protein DKAM_1357|Desulfurococcus amylolyticus (strain DSM

Query: 2 EIDICGEG 9
+I ICG G
Sbjct: 232 DISICGPG 239


>sp|Y103_SACS2|PROTEIN SSO0103|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LEIDICGEGE 10
LEI I G G+
Sbjct: 232 LEIQIAGSGK 241


>sp|Y084_METJA|UNCHARACTERIZED ATP-binding protein MJ0084|Methanocaldococcus jannaschii

Query: 1 LEIDICGEG 9
++I ICG+G
Sbjct: 1 MKISICGKG 9


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 IDICGEG 9
+DIC +G
Sbjct: 227 VDICADG 233


>sp|Y1959_METB6|UPF0179 protein Mboo_1959|Methanoregula boonei (strain DSM 21154

Query: 4 DICGEG 9
DICG+G
Sbjct: 132 DICGKG 137


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 IDICGEG 9
+ ICG+G
Sbjct: 759 VSICGQG 765


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 2 EIDICGE 8
+IDIC E
Sbjct: 333 DIDICSE 339


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 2 EIDICGE 8
+IDIC E
Sbjct: 333 DIDICSE 339


>sp|TRPD_CENSY|ANTHRANILATE phosphoribosyltransferase|Cenarchaeum symbiosum (strain A)

Query: 3 IDICGEG 9
ID+CG G
Sbjct: 73 IDVCGTG 79




361|Sequence|1801|1810|CGEGETLLKK

>sp|KPTA2_ARCFU|PROBABLE RNA 2'-phosphotransferase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 CGEGETLLK 9
CG+GE LLK
Sbjct: 18 CGKGEVLLK 26


>sp|ASPGP_PYRCJ|PLANT-TYPE L-asparaginase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GEGETLLKK 10
GEG TLL K
Sbjct: 118 GEGATLLAK 126


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 2 GEGETLLKK 10
GEG L+KK
Sbjct: 30 GEGNELIKK 38


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 EGETLLK 9
+GETLLK
Sbjct: 819 DGETLLK 825


>sp|Y1126_METTH|UNCHARACTERIZED protein MTH_1126|Methanothermobacter thermautotrophicus (strain

Query: 3 EGETLLK 9
+GETLLK
Sbjct: 168 KGETLLK 174


>sp|PMDHS_METMA|PHOSPHOMEVALONATE dehydratase small subunit|Methanosarcina mazei (strain ATCC

Query: 1 CGEGETLLKK 10
C EGE L+ +
Sbjct: 15 CAEGEVLISR 24


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 1 CGEGETLLK 9
CG GE L++
Sbjct: 24 CGPGEVLVR 32


>sp|DNLI_NANEQ|DNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 EGETLLKK 10
EGE L+KK
Sbjct: 345 EGEQLMKK 352


>sp|DAPA_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CGEGETLLKK 10
C E E +LK+
Sbjct: 280 CDENEVILKE 289




362|Sequence|1806|1815|TLLKKWALYS

>sp|KTHY_PYRCJ|PROBABLE thymidylate kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LLKKWAL 8
LLK+WAL
Sbjct: 41 LLKEWAL 47


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 TLLKKWALYS 10
T+L+ WAL S
Sbjct: 433 TILRTWALPS 442


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 TLLKKWALYS 10
T+L+ WAL S
Sbjct: 433 TILRTWALPS 442


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 TLLKKWALYS 10
T+L+ WAL S
Sbjct: 450 TILRTWALPS 459


>sp|Y047_METJA|PROBABLE RNase MJ4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TLLKKWAL 8
T+L+ WAL
Sbjct: 404 TILRNWAL 411


>sp|T2M2_METJA|TYPE II restriction enzyme MjaII|Methanocaldococcus jannaschii (strain

Query: 2 LLKKWALYS 10
+L++W LYS
Sbjct: 305 ILQEWRLYS 313


>sp|KTHY_PYRAE|PROBABLE thymidylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LLKKWAL 8
L+K+WAL
Sbjct: 42 LIKEWAL 48


>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 1 TLLKKWALY 9
TLLKK LY
Sbjct: 267 TLLKKVKLY 275


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 KKWALYS 10
K WALY+
Sbjct: 71 KPWALYT 77




363|Sequence|1811|1820|WALYSFNDGE

>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain ATCC

Query: 1 WALYSFNDGE 10
W LY DG+
Sbjct: 232 WILYEIEDGD 241


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 1 WALYSFNDGE 10
W LY DG+
Sbjct: 232 WILYEIEDGD 241


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 1 WALYSFNDGE 10
+ LYS +DGE
Sbjct: 53 YGLYSQDDGE 62


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WALYSFNDGE 10
W L F DGE
Sbjct: 207 WTLIYFADGE 216


>sp|PURO_METTH|IMP cyclohydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ALYSFNDGE 10
A +FNDGE
Sbjct: 185 AAAAFNDGE 193


>sp|PORB_METBF|PYRUVATE synthase subunit PorB|Methanosarcina barkeri (strain Fusaro /

Query: 1 WALYSFNDGE 10
W +Y +GE
Sbjct: 234 WPMYEMENGE 243


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 WALYSFNDGE 10
W L F +GE
Sbjct: 462 WKLMGFGEGE 471


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 WALYSFNDGE 10
W L F DGE
Sbjct: 207 WTLIYFVDGE 216


>sp|RS27A_PYRFU|SMALL ribosomal subunit protein eS31|Pyrococcus furiosus (strain ATCC

Query: 1 WALYSFNDGE 10
W LY DG+
Sbjct: 5 WKLYEIKDGK 14




364|Sequence|1816|1825|FNDGEEHQKI

>sp|Y1007_METMA|UPF0215 protein MM_1007|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FNDGEEHQKI 10
F+DGEE KI
Sbjct: 120 FSDGEERWKI 129


>sp|RS19_METAR|SMALL ribosomal subunit protein uS19|Methanocella arvoryzae (strain DSM

Query: 4 GEEHQKI 10
GEEHQK+
Sbjct: 54 GEEHQKL 60


>sp|NADC_METJA|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 1 FNDGEE 6
FNDGEE
Sbjct: 68 FNDGEE 73


>sp|Y2201_ARCFU|UNCHARACTERIZED protein AF_2201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FNDGEEHQKI 10
+ DGEE +KI
Sbjct: 40 YVDGEEMEKI 49


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 FNDGEEHQKI 10
F D EEH ++
Sbjct: 70 FTDLEEHSRL 79


Query: 1 FNDGEE 6
FN+GEE
Sbjct: 189 FNEGEE 194


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GEEHQK 9
GEEH+K
Sbjct: 167 GEEHKK 172


>sp|DAPA_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 EEHQKI 10
EEHQK+
Sbjct: 55 EEHQKV 60


>sp|LEU1_METKA|PROBABLE 2-isopropylmalate synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 DGEEHQ 8
DGEEH+
Sbjct: 405 DGEEHE 410


>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 NDGEEHQ 8
+DGE+H+
Sbjct: 2 SDGEDHE 8


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 2 NDGEEHQK 9
NDGEE +K
Sbjct: 188 NDGEELKK 195




365|Sequence|1821|1830|EHQKILLDDL

>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 EHQKILLDDL 10
E+QK L+DD+
Sbjct: 237 EYQKALVDDV 246


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 EHQKILLDDL 10
E+QK L+DD+
Sbjct: 237 EYQKALVDDV 246


>sp|Y553_METJA|ACYLPHOSPHATASE-LIKE protein MJ0553|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EHQKILLD 8
EH+KILLD
Sbjct: 123 EHKKILLD 130


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 1 EHQKILLDDL 10
+HQ L+DD+
Sbjct: 236 DHQAALIDDV 245


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 HQKILLDDL 10
H K+L+DDL
Sbjct: 868 HNKMLVDDL 876


>sp|THII_SULTO|PROBABLE tRNA sulfurtransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HQKILLDDL 10
H+KI+LD++
Sbjct: 204 HKKIVLDEV 212


>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HQKILLDDL 10
HQK LDD+
Sbjct: 173 HQKFTLDDV 181


>sp|TPIS_METS5|TRIOSEPHOSPHATE isomerase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EHQKILLD 8
E QK+LLD
Sbjct: 209 EPQKVLLD 216


>sp|RS17E_NATPD|SMALL ribosomal subunit protein eS17|Natronomonas pharaonis (strain

Query: 1 EHQKILLDDL 10
EH K L+D+L
Sbjct: 28 EHNKELVDEL 37


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 1 EHQKILLDD 9
EH KI+++D
Sbjct: 72 EHYKIIVED 80


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EHQKILLDDL 10
+H K L++DL
Sbjct: 329 KHYKFLMNDL 338


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius (strain

Query: 1 EHQKILLDDL 10
+HQ ++DDL
Sbjct: 182 DHQMAIVDDL 191


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EHQKILLDD 9
EH+K +DD
Sbjct: 169 EHKKYSIDD 177


>sp|LYSK_SULAC|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EHQKILLDDL 10
+H+KI LD++
Sbjct: 319 DHEKISLDEI 328


>sp|NEP1_ARCFU|RIBOSOMAL RNA small subunit methyltransferase|Archaeoglobus fulgidus

Query: 3 QKILLDD 9
+KILLDD
Sbjct: 37 EKILLDD 43


>sp|RADA_SULTO|DNA repair and recombination protein|Sulfurisphaera tokodaii (strain

Query: 1 EHQKILLDDL 10
+HQ ++DDL
Sbjct: 185 DHQMAIVDDL 194


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 1 EHQKILLDD 9
EH K L+DD
Sbjct: 174 EHAKELIDD 182


>sp|FPOK_METMA|F(420)H(2) dehydrogenase subunit K|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HQKILLDDL 10
H KI LD+L
Sbjct: 89 HDKINLDEL 97




366|Sequence|1826|1835|LLDDLMKKAE

>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LLDDLMKKAE 10
L++D+MKKAE
Sbjct: 263 LVNDVMKKAE 272


>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 LLDDLMKKAE 10
L DDL+KK E
Sbjct: 29 LTDDLLKKTE 38


>sp|TRMBR_THELN|HTH-TYPE sugar sensing transcriptional regulator|Thermococcus litoralis

Query: 2 LDDLMKKAE 10
L+D+MKK E
Sbjct: 88 LEDIMKKLE 96


>sp|TRMBR_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus

Query: 2 LDDLMKKAE 10
L+D+MKK E
Sbjct: 88 LEDIMKKLE 96


>sp|Y1134_METJA|UNCHARACTERIZED protein MJ1134|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLDDLMKKA 9
LLDDLMK+
Sbjct: 170 LLDDLMKEG 178


>sp|PELO_METTP|PROTEIN pelota homolog|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LLDDLMKK 8
L+DDLMK+
Sbjct: 257 LMDDLMKE 264


>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LLDDLMKKAE 10
L+D+LMK+++
Sbjct: 211 LMDELMKESQ 220




367|Sequence|1831|1840|MKKAEEGDLL

>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 KAEEGDLL 10
+AEEGDLL
Sbjct: 548 RAEEGDLL 555


>sp|CHEB_METBF|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanosarcina barkeri

Query: 1 MKKAEEGDLL 10
+K+AEEGD++
Sbjct: 229 VKEAEEGDII 238


>sp|CHEB_PYRAB|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus abyssi

Query: 1 MKKAEEGDLL 10
+K+AEEGD++
Sbjct: 221 VKEAEEGDVV 230


>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus horikoshii

Query: 1 MKKAEEGDLL 10
+K+AEEGD++
Sbjct: 221 VKEAEEGDVV 230


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 MKKAEEGD 8
MKK EEGD
Sbjct: 257 MKKYEEGD 264


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 MKKAEEGDLL 10
+ K EEGD+L
Sbjct: 360 ISKVEEGDIL 369


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 MKKAEEGD 8
MKK EEGD
Sbjct: 237 MKKLEEGD 244


>sp|CHEB2_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina mazei

Query: 1 MKKAEEGDLL 10
+K+A+EGD++
Sbjct: 232 VKEAQEGDIM 241


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 MKKAEEGDLL 10
++K+EEGD++
Sbjct: 318 LQKSEEGDVI 327


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 1 MKKAEEGDLL 10
+ K EEGDL+
Sbjct: 320 LAKNEEGDLI 329


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 KKAEEGDLL 10
+K EEGD+L
Sbjct: 130 EKVEEGDVL 138


>sp|RL21_METS3|LARGE ribosomal subunit protein eL21|Methanobrevibacter smithii (strain

Query: 1 MKKAEEGDLL 10
++K EEGDL+
Sbjct: 31 LQKFEEGDLV 40


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 MKKAEEGDL 9
+KKAE GD+
Sbjct: 381 IKKAEVGDI 389


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 MKKAEEGDL 9
+KKAE GD+
Sbjct: 381 IKKAEVGDI 389


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 MKKAEEGDL 9
+KKAE GD+
Sbjct: 381 IKKAEVGDI 389


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 MKKAEEGDL 9
+KKAE GD+
Sbjct: 381 IKKAEVGDI 389


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 MKKAEEGDLL 10
+K+A E DLL
Sbjct: 165 LKRAHEKDLL 174


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 1 MKKAEEGDL 9
+KKAE GD+
Sbjct: 381 IKKAEVGDV 389


>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 1 MKKAEEGDL 9
+KKAE GD+
Sbjct: 381 IKKAEVGDV 389


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 MKKAEEGDL 9
+KKA +GDL
Sbjct: 429 VKKAADGDL 437


>sp|RL1_CENSY|LARGE ribosomal subunit protein uL1|Cenarchaeum symbiosum (strain A)

Query: 1 MKKAEEGD 8
+KKA+EGD
Sbjct: 11 IKKAKEGD 18


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 1 MKKAEEGDL 9
+KKAE GD+
Sbjct: 939 IKKAEVGDV 947


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KKAEEGDLL 10
KK E+GD+L
Sbjct: 401 KKMEKGDVL 409


>sp|IF2P_ARCFU|PROBABLE translation initiation factor IF-2|Archaeoglobus fulgidus (strain

Query: 1 MKKAEEGDL 9
+KKAE GD+
Sbjct: 384 IKKAEVGDV 392




368|Sequence|1836|1845|EGDLLVNPDQ

>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 2 GDLLVNPDQ 10
GD+++NPD+
Sbjct: 682 GDVVMNPDK 690


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GDLLVNPDQ 10
GD+++NPD+
Sbjct: 675 GDVVMNPDR 683


>sp|DPCKG_DESA1|GTP-DEPENDENT dephospho-CoA kinase|Desulfurococcus amylolyticus (strain DSM

Query: 1 EGDLLVNPDQ 10
+GDL V+PD+
Sbjct: 22 QGDLYVSPDR 31


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 2 GDLLVNPDQ 10
GD+++NPD+
Sbjct: 682 GDVVMNPDR 690


>sp|HYPA_ARCFU|HYDROGENASE maturation factor HypA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LLVNPDQ 10
LL+NP+Q
Sbjct: 37 LLINPEQ 43


>sp|DGGGP_PYRHO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DLLVNPDQ 10
D+LVNP++
Sbjct: 242 DVLVNPEK 249


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DLLVNPDQ 10
D+L++PD+
Sbjct: 246 DILIDPDR 253


>sp|DCD_HALLT|DCTP deaminase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EGDLLVNP 8
EGDL+V P
Sbjct: 14 EGDLVVEP 21


>sp|GVPG_HALMT|GAS vesicle protein G|Haloferax mediterranei (strain ATCC 33500

Query: 3 DLLVNP 8
DLLVNP
Sbjct: 6 DLLVNP 11


>sp|Y1705_METHJ|UPF0173 metal-dependent hydrolase Mhun_1705|Methanospirillum hungatei

Query: 1 EGDLLVNPD 9
EG++ V PD
Sbjct: 27 EGEIRVTPD 35


>sp|RISC_ARCFU|RIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DLLVNPDQ 10
DLLVNP +
Sbjct: 125 DLLVNPKR 132


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGDLLVNPD 9
E D+L+ PD
Sbjct: 75 ESDMLLKPD 83


>sp|Y034_METJA|IRON-SULFUR cluster assembly SufBD family|Methanocaldococcus jannaschii (strain

Query: 1 EGDLLVNP 8
+GD+LV P
Sbjct: 143 DGDILVKP 150


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EGDLLVNPD 9
EGD ++ PD
Sbjct: 514 EGDYILMPD 522


>sp|THIOL_METTH|ACETYL-COA acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 EGDLLVNP 8
+GD+ VNP
Sbjct: 316 DGDIPVNP 323


>sp|PELO_DESA1|PROTEIN pelota homolog|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 GDLLVNPD 9
GDLL PD
Sbjct: 294 GDLLHEPD 301


>sp|COFD_METVS|2-PHOSPHO-L-LACTATE transferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GDLLVNPD 9
GDL ++PD
Sbjct: 41 GDLYLSPD 48




369|Sequence|1841|1850|VNPDQPRLTI

>sp|GLMD_THEKO|GLUCOSAMINE-6-PHOSPHATE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VNPDQPRL 8
+NPDQPR
Sbjct: 312 LNPDQPRF 319


>sp|TFE_PYRHO|TRANSCRIPTION factor E|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NPDQPRLT 9
NPD P+LT
Sbjct: 118 NPDHPKLT 125


>sp|GLMS_SULAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfolobus acidocaldarius (strain

Query: 1 VNPDQPR 7
+NPD+PR
Sbjct: 575 LNPDKPR 581


>sp|T1MH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 1 VNPDQPRLTI 10
+ PD PRL I
Sbjct: 340 IKPDDPRLRI 349


>sp|TFE_PYRAB|TRANSCRIPTION factor E|Pyrococcus abyssi (strain GE5 /

Query: 2 NPDQPRLT 9
NP+ P+LT
Sbjct: 118 NPEHPKLT 125


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 2 NPDQPR 7
NPD+PR
Sbjct: 584 NPDRPR 589


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 2 NPDQPR 7
NPD+PR
Sbjct: 584 NPDRPR 589


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 2 NPDQPR 7
NPD+PR
Sbjct: 584 NPDRPR 589


>sp|SYFB_AERPE|PHENYLALANINE--TRNA ligase beta subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 VNPDQPRLTI 10
VNPD+P + I
Sbjct: 45 VNPDRPDMYI 54


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VNPDQPRLT 9
VNP PR T
Sbjct: 358 VNPTAPRTT 366


>sp|IF6_HALLT|TRANSLATION initiation factor 6|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VNPDQPRLTI 10
V+PD PR +I
Sbjct: 112 VHPDLPRESI 121


>sp|Y36K_HALSN|UNCHARACTERIZED 36 kDa protein|Halobacterium sp. (strain GN101)

Query: 1 VNPDQPR 7
V+P+QPR
Sbjct: 308 VDPEQPR 314


>sp|KDPA_THEAC|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma acidophilum (strain

Query: 1 VNPDQPRLT 9
VNP+ R+T
Sbjct: 464 VNPESSRIT 472


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 VNPDQPR 7
VNP+ PR
Sbjct: 214 VNPNDPR 220


>sp|RIB7_METJA|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DQPRLTI 10
D PRLT+
Sbjct: 61 DDPRLTV 67


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VNPDQPRLTI 10
++P++P+L +
Sbjct: 352 IDPEEPKLAV 361


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 1 VNPDQPR 7
V+PD PR
Sbjct: 233 VHPDMPR 239


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 VNPDQP 6
+NPD+P
Sbjct: 56 INPDRP 61


>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 1 VNPDQPRLTI 10
+NPD P + I
Sbjct: 219 LNPDNPPIII 228


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VNPDQPRLTI 10
+ P++P+L +
Sbjct: 351 IEPEEPKLAV 360


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 1 VNPDQPRLTI 10
+ P++P+L +
Sbjct: 351 IKPEEPKLAV 360


>sp|RIB7_ARCFU|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DQPRLTI 10
D PRLT+
Sbjct: 56 DDPRLTV 62


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 VNPDQPRLTI 10
+ P++P+L +
Sbjct: 351 IEPEEPKLAV 360


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 1 VNPDQP 6
+NPD+P
Sbjct: 56 INPDRP 61


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VNPDQP 6
+NPD+P
Sbjct: 51 INPDRP 56


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 1 VNPDQP 6
+NPD+P
Sbjct: 56 INPDRP 61


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VNPDQPRLTI 10
+ P++P+L +
Sbjct: 351 IEPEEPKLAV 360


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 1 VNPDQP 6
+NPD+P
Sbjct: 56 INPDRP 61


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VNPDQPRLTI 10
+ P++P+L +
Sbjct: 351 IEPEEPKLAV 360


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 VNPDQP 6
+NPD+P
Sbjct: 56 INPDRP 61




370|Sequence|1846|1855|PRLTIPISQI

>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LTIPISQI 10
LTIP++QI
Sbjct: 254 LTIPVTQI 261


>sp|Y585_METJA|UNCHARACTERIZED protein MJ0585|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PRLTIPIS 8
P +TIPIS
Sbjct: 180 PLITIPIS 187


>sp|TRPD_METMJ|ANTHRANILATE phosphoribosyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 1 PRLTIPISQI 10
P LT+P++++
Sbjct: 198 PCLTLPVARV 207




371|Sequence|1851|1860|PISQIAPDLI

>sp|RIBL_HALMD|FAD synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 PISQIAPDLI 10
PI QI PD+I
Sbjct: 80 PIEQIEPDVI 89


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ISQIAPDLI 10
+S+I PDLI
Sbjct: 168 LSEITPDLI 176


>sp|RIBL_HALJB|FAD synthase|Halalkalicoccus jeotgali (strain DSM 18796

Query: 1 PISQIAPDLI 10
PI +I PD+I
Sbjct: 78 PIEEIDPDVI 87


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 ISQIAPDLI 10
+SQI+PD++
Sbjct: 234 LSQISPDIV 242


>sp|RIBL_FERPA|FAD synthase|Ferroglobus placidus (strain DSM 10642

Query: 1 PISQIAPDLI 10
PI +I PD+I
Sbjct: 78 PIEKIKPDVI 87


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PISQIAPDLI 10
PI++I PD+I
Sbjct: 78 PIAEIRPDII 87


>sp|RIBL_METEZ|FAD synthase|Methanohalobium evestigatum (strain ATCC BAA-1072

Query: 1 PISQIAPDLI 10
PI I PD+I
Sbjct: 89 PIKNIKPDVI 98


>sp|RIBL_HALVD|FAD synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 PISQIAPDLI 10
PI +I PD+I
Sbjct: 78 PIEEIDPDVI 87


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ISQIAPDL 9
+SQI+PD+
Sbjct: 234 LSQISPDI 241


>sp|RIBL_NATMM|FAD synthase|Natrialba magadii (strain ATCC 43099

Query: 1 PISQIAPDLI 10
PI +I PD+I
Sbjct: 83 PIERIDPDVI 92


>sp|DNLI2_METMA|DNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ISQIAPDL 9
+SQI+PD+
Sbjct: 234 LSQISPDI 241


>sp|RIBL_HALLT|FAD synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PISQIAPDLI 10
PI ++ PD+I
Sbjct: 78 PIQRLDPDVI 87


>sp|HEM2_METTH|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermobacter thermautotrophicus (strain

Query: 2 ISQIAPDLI 10
IS APDL+
Sbjct: 315 ISHFAPDLL 323


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM

Query: 2 ISQIAPDLI 10
+ ++APDL+
Sbjct: 22 VVEVAPDLV 30


>sp|KADL_METTH|ADENYLATE kinase homolog MTH_1663|Methanothermobacter thermautotrophicus

Query: 1 PISQIAPDLI 10
P+ I+PD+I
Sbjct: 100 PVDIISPDII 109




372|Sequence|1856|1865|APDLILADLP

>sp|PANB_SACI7|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 2 PDLILADLP 10
P LI+AD+P
Sbjct: 78 PQLIVADMP 86


>sp|PANB_SACI6|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4

Query: 2 PDLILADLP 10
P LI+AD+P
Sbjct: 78 PQLIVADMP 86


>sp|PANB_SACI4|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 2 PDLILADLP 10
P LI+AD+P
Sbjct: 78 PQLIVADMP 86


>sp|PANB_SACI3|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 2 PDLILADLP 10
P LI+AD+P
Sbjct: 78 PQLIVADMP 86


>sp|PANB_SACI2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 2 PDLILADLP 10
P LI+AD+P
Sbjct: 78 PQLIVADMP 86


>sp|PANB_SACI1|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 2 PDLILADLP 10
P LI+AD+P
Sbjct: 78 PQLIVADMP 86


>sp|PANB_SULTO|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 2 PDLILADLP 10
P LI+AD+P
Sbjct: 78 PQLIVADMP 86


>sp|PANB_SACS2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 PDLILADLP 10
P LI++D+P
Sbjct: 78 PQLIVSDMP 86


>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PDLILADL 9
PD+I++DL
Sbjct: 100 PDIIVSDL 107


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PDLILADLP 10
PD+ + D+P
Sbjct: 550 PDICIGDIP 558


>sp|PANB_PYRHO|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 4 LILADLP 10
L+LAD+P
Sbjct: 79 LVLADMP 85


>sp|PANB_PYRFU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LILADLP 10
L+LAD+P
Sbjct: 79 LVLADMP 85


>sp|TRMY_THEKO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 1 APDLILADLP 10
+PD L DLP
Sbjct: 14 SPDFSLKDLP 23


>sp|PANB_PYRAB|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 LILADLP 10
L+LAD+P
Sbjct: 79 LVLADMP 85


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 2 PDLILAD 8
PDLIL D
Sbjct: 457 PDLILID 463


>sp|PHNC1_HALWD|PHOSPHONATES import ATP-binding protein PhnC|Haloquadratum walsbyi (strain DSM

Query: 2 PDLILADLP 10
P L+LAD P
Sbjct: 158 PSLLLADEP 166


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 APDLILADL 9
+PD++ ADL
Sbjct: 10 SPDVVRADL 18


>sp|TRMY_METTP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanothrix

Query: 2 PDLILADLP 10
PD L DLP
Sbjct: 15 PDFSLEDLP 23


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 3 DLILADL 9
DLILAD+
Sbjct: 403 DLILADI 409


>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 APDLILADL 9
+PD++ ADL
Sbjct: 10 SPDVVKADL 18


>sp|PANB_THEKO|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 LILADLP 10
L+LAD+P
Sbjct: 79 LVLADMP 85


>sp|SYR_HALSA|ARGININE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PDLILADLP 10
PD ILAD+
Sbjct: 122 PDTILADVS 130


>sp|PHNC_HALSA|PHOSPHONATES import ATP-binding protein PhnC|Halobacterium salinarum (strain

Query: 2 PDLILADLP 10
P+L+LAD P
Sbjct: 157 PNLLLADEP 165




373|Sequence|1861|1870|LADLPRNIML

>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain ATCC

Query: 1 LADLPRNIML 10
LAD PR++ L
Sbjct: 659 LADRPRHVFL 668


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 1 LADLPRNIML 10
LAD PR++ L
Sbjct: 590 LADRPRHVFL 599


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain ATCC

Query: 1 LADLPRNIML 10
LAD PR++ L
Sbjct: 482 LADRPRHVFL 491


>sp|Y007_METJA|PUTATIVE dehydratase subunit MJ0007|Methanocaldococcus jannaschii (strain

Query: 3 DLPRNI 8
DLPRN+
Sbjct: 68 DLPRNL 73


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LADLPRNIML 10
L +LP NI++
Sbjct: 154 LRELPENILI 163


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 3 DLPRNIML 10
D+PRNI +
Sbjct: 33 DIPRNIRI 40


>sp|TPIS_METTH|TRIOSEPHOSPHATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LADLPRNIML 10
LAD PR+ +L
Sbjct: 214 LADSPRDALL 223




374|Sequence|1866|1875|RNIMLNNDEL

>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NIMLNNDEL 10
NI+LNND++
Sbjct: 52 NILLNNDKI 60


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 1 RNIMLNND 8
RN+MLN D
Sbjct: 92 RNVMLNFD 99


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NIMLNNDEL 10
N+ML+NDE+
Sbjct: 385 NLMLSNDEV 393


>sp|RS4E_SULAC|SMALL ribosomal subunit protein eS4|Sulfolobus acidocaldarius (strain

Query: 1 RNIMLNNDEL 10
RNI+L +EL
Sbjct: 140 RNILLKGEEL 149


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 NIMLNNDEL 10
NI+L+ND++
Sbjct: 52 NILLDNDKI 60




375|Sequence|1871|1880|NNDELEFEQA

>sp|COME_METTH|SULFOPYRUVATE decarboxylase subunit beta|Methanothermobacter thermautotrophicus

Query: 3 DELEFEQA 10
D+L FEQA
Sbjct: 134 DDLNFEQA 141


>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 2 NDELEFE 8
NDELE E
Sbjct: 378 NDELEVE 384




376|Sequence|1876|1885|EFEQAPEFLL

>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 EFEQAPEFLL 10
+FE PEFLL
Sbjct: 169 KFEITPEFLL 178


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 5 APEFLL 10
APEFLL
Sbjct: 690 APEFLL 695


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 5 APEFLL 10
APEFLL
Sbjct: 690 APEFLL 695


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 5 APEFLL 10
APEFLL
Sbjct: 691 APEFLL 696


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 5 APEFLL 10
APEFLL
Sbjct: 691 APEFLL 696


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 5 APEFLL 10
APEFLL
Sbjct: 691 APEFLL 696


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 5 APEFLL 10
APEFLL
Sbjct: 691 APEFLL 696


>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EFEQAPEFLL 10
+FEQ+P+ +L
Sbjct: 140 DFEQSPDAIL 149


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 5 APEFLL 10
APEFLL
Sbjct: 691 APEFLL 696


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 1 EFEQAPEFLL 10
E E PE+LL
Sbjct: 185 EIELTPEYLL 194


>sp|CPGS_METS3|CYCLIC 2,3-diphosphoglycerate synthetase|Methanobrevibacter smithii

Query: 1 EFEQAPEFLL 10
+ E PEFLL
Sbjct: 186 QLEITPEFLL 195


>sp|LEUD2_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 EFEQAPEFLL 10
+FE P FLL
Sbjct: 133 QFEPLPGFLL 142


>sp|SPH3_HALVD|SMC-LIKE protein Sph3|Haloferax volcanii (strain ATCC 29605

Query: 2 FEQAPEFLL 10
FEQ P FL+
Sbjct: 618 FEQYPTFLV 626


>sp|ADH_THEBA|ALCOHOL dehydrogenase|Thermococcus barophilus

Query: 2 FEQAPEFLL 10
FE APEF +
Sbjct: 167 FEIAPEFAI 175




377|Sequence|1881|1890|PEFLLGDGSF

>sp|CSL4_SACS2|EXOSOME complex component Csl4|Saccharolobus solfataricus (strain ATCC

Query: 2 EFLLGDGSF 10
EF+ GDG++
Sbjct: 19 EFMTGDGTY 27


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 PEFLLGDGSF 10
P+FL GDG +
Sbjct: 629 PKFLQGDGGW 638


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 PEFLLGDGSF 10
P+FL GDG +
Sbjct: 336 PKFLQGDGGW 345


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 FLLGDGS 9
F+LGDGS
Sbjct: 59 FVLGDGS 65


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PEFLLGDGSF 10
P FL+G G F
Sbjct: 193 PLFLIGQGIF 202


>sp|DNAG_PYRNV|DNA primase DnaG|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PEFLLGDG 8
P+FL G+G
Sbjct: 340 PDFLTGEG 347


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 2 EFLLGDGSF 10
EFL+ DG F
Sbjct: 275 EFLVEDGEF 283


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 4 LLGDGSF 10
L GDGSF
Sbjct: 249 LTGDGSF 255


>sp|CAS6L_PYRFU|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6|Pyrococcus

Query: 1 PEFLLGDGSF 10
PEF +GD F
Sbjct: 98 PEFKIGDVGF 107


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FLLGDG 8
F+LGDG
Sbjct: 334 FMLGDG 339


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 FLLGDG 8
F+LGDG
Sbjct: 339 FMLGDG 344


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 FLLGDG 8
F+LGDG
Sbjct: 347 FMLGDG 352


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 1 PEFLLGDGSF 10
P+FL DG +
Sbjct: 337 PKFLQADGGY 346


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PEFLLGDG 8
P+F++G G
Sbjct: 208 PDFMVGSG 215


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 PEFLLGDG 8
PE + GDG
Sbjct: 572 PELVAGDG 579


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 PEFLLGDG 8
PE + GDG
Sbjct: 572 PELVAGDG 579


>sp|SIHH_METTH|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PEFLLGDGS 9
PE L+ DG+
Sbjct: 118 PEILIDDGA 126


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FLLGDG 8
F+LGDG
Sbjct: 347 FMLGDG 352


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 FLLGDG 8
F+LGDG
Sbjct: 943 FILGDG 948


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 FLLGDG 8
F+LGDG
Sbjct: 341 FMLGDG 346


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FLLGDG 8
F+LGDG
Sbjct: 349 FMLGDG 354


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 FLLGDGSF 10
F+ GDG F
Sbjct: 446 FIAGDGCF 453


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 FLLGDG 8
F+LGDG
Sbjct: 347 FMLGDG 352


>sp|1A1D_PYRAB|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus abyssi

Query: 2 EFLLGDG 8
EFLLGD
Sbjct: 59 EFLLGDA 65


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 3 FLLGDGSF 10
+++GDG F
Sbjct: 281 YIIGDGHF 288


>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 3 FLLGDG 8
FL+GDG
Sbjct: 107 FLMGDG 112




378|Sequence|1886|1895|GDGSFGSVYR

>sp|RIFK_METST|RIBOFLAVIN kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GDGSFGSV 8
G+GSFG V
Sbjct: 65 GNGSFGDV 72


>sp|MAP2_METJA|METHIONINE aminopeptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DGSFGSVYR 10
DG+ G++Y+
Sbjct: 201 DGNLGNIYK 209


>sp|DHYS_THEVO|PROBABLE deoxyhypusine synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DGSFGS 7
DGSFGS
Sbjct: 193 DGSFGS 198


>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GDGSFGSV 8
G G+FGSV
Sbjct: 116 GQGNFGSV 123


>sp|PIMT_METB6|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 GDGSFG 6
GDG+FG
Sbjct: 136 GDGTFG 141


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 3 GSFGSVYR 10
G FG VYR
Sbjct: 11 GRFGDVYR 18


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 3 GSFGSVYR 10
G FG VYR
Sbjct: 11 GRFGDVYR 18


>sp|DHYS_THEAC|PROBABLE deoxyhypusine synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DGSFGS 7
DGSFGS
Sbjct: 193 DGSFGS 198


>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 1 GDGSFGSV 8
G G+FGSV
Sbjct: 116 GQGNFGSV 123


>sp|COFE_ARCFU|COENZYME F420:L-glutamate ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDGSFGSVYR 10
G+GS +YR
Sbjct: 225 GEGSMEEIYR 234


>sp|IF6_THEAC|TRANSLATION initiation factor 6|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GDGSFGSVY 9
G +FGS+Y
Sbjct: 177 GTANFGSIY 185


>sp|IF6_THEVO|TRANSLATION initiation factor 6|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GDGSFGSVY 9
G +FGS+Y
Sbjct: 179 GTANFGSIY 187


>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GDGSFGSVY 9
GDG FGS +
Sbjct: 250 GDGRFGSKF 258


>sp|SPSS_METVS|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DGSFGSV 8
DGS+G+V
Sbjct: 166 DGSYGNV 172




379|Sequence|1891|1900|GSVYRAAYEG

>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SVYRAAYE 9
S+YR AYE
Sbjct: 40 SIYRLAYE 47


>sp|GPDA_ARCFU|NADP(+)-DEPENDENT glycerol-3-phosphate dehydrogenase|Archaeoglobus fulgidus (strain

Query: 2 SVYRAAYEG 10
S+YR YEG
Sbjct: 313 SIYRVLYEG 321


>sp|DNAG_HYPBU|DNA primase DnaG|Hyperthermus butylicus (strain DSM 5456

Query: 1 GSVYRAAYEG 10
G VY AY+G
Sbjct: 375 GKVYAVAYDG 384


>sp|GLK_AERPE|GLUCOKINASE pernix (strain ATCC 700893

Query: 2 SVYRAAYEG 10
S+YRAA EG
Sbjct: 204 SLYRAALEG 212


>sp|Y692_METTH|UNCHARACTERIZED protein MTH_692|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SVYRAAYEG 10
SV+RA +EG
Sbjct: 240 SVFRAMHEG 248


>sp|Y1628_METJA|UNCHARACTERIZED protein MJ1628|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSVYRAAYE 9
G +Y+A YE
Sbjct: 92 GRIYKALYE 100


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 RAAYEG 10
RAAYEG
Sbjct: 203 RAAYEG 208


>sp|PGP_METHJ|PHOSPHOGLYCOLATE phosphatase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GSVYRAAYEG 10
G VYR ++G
Sbjct: 67 GGVYRIGFQG 76




380|Sequence|1896|1905|AAYEGEEVAV

>sp|Y2264_ARCFU|PUTATIVE esterase AF_2264|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AAYEGEEV 8
AAYEGE++
Sbjct: 101 AAYEGEKL 108


>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 YEGEEVA 9
+EGEEVA
Sbjct: 338 FEGEEVA 344


>sp|Y1677_METJA|UPF0056 membrane protein MJ1677|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AAYEGEEVAV 10
AAYE +E+A+
Sbjct: 105 AAYEIDEIAL 114


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 2 AYEGEEVAV 10
AY G+EV V
Sbjct: 26 AYPGDEVEV 34


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 1 AAYEGEEVAV 10
AY+G VAV
Sbjct: 232 TAYQGSNVAV 241


>sp|IDI2_IGNH4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AAYEGEE 7
AAYEG+E
Sbjct: 299 AAYEGKE 305




381|Sequence|1901|1910|EEVAVKIFNK

>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EEVAVKIFNK 10
EE+ VK+F++
Sbjct: 321 EEIPVKVFDR 330


>sp|Y685_METJA|UNCHARACTERIZED ATP-binding protein MJ0685|Methanocaldococcus jannaschii (strain

Query: 1 EEVAVKIFNK 10
EE+A KI NK
Sbjct: 242 EEIAEKIINK 251


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 1 EEVAVKIFN 9
EEV VKIF+
Sbjct: 421 EEVDVKIFS 429




382|Sequence|1906|1915|KIFNKHTSLR

>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KIFNKHTSLR 10
KIF+KH ++R
Sbjct: 100 KIFDKHLAVR 109


>sp|GGR3_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 3|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KIFNKHTSL 9
K+F+KH ++
Sbjct: 103 KVFDKHMTM 111


>sp|GGR_METS3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KIFNKHTSL 9
K+F+KH ++
Sbjct: 101 KVFDKHMAM 109


>sp|GGR2_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KIFNKHTSL 9
K+F+KH ++
Sbjct: 101 KVFDKHMAM 109


>sp|GGR1_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KIFNKHTSL 9
K+F+KH ++
Sbjct: 99 KVFDKHMAM 107


>sp|Y1401_SACS2|PUTATIVE CRISPR-associated protein SSO1401|Saccharolobus solfataricus

Query: 4 NKHTSLR 10
N HTSLR
Sbjct: 225 NSHTSLR 231


>sp|Y1514_METVS|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus vannielii

Query: 1 KIFNKHTSL 9
KIFN H+ L
Sbjct: 277 KIFNSHSLL 285




383|Sequence|1911|1920|HTSLRLLRQE

>sp|PURP_PYRNV|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum neutrophilum (strain DSM

Query: 1 HTSLRLLR 8
HT+L++LR
Sbjct: 31 HTALQILR 38


>sp|PURP_PYRIL|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum islandicum (strain DSM

Query: 1 HTSLRLLR 8
HT+L++LR
Sbjct: 20 HTALQILR 27


>sp|PURP_PYRCJ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum calidifontis (strain DSM

Query: 1 HTSLRLLR 8
HT+L++LR
Sbjct: 21 HTALQILR 28


>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 1 HTSLRLLR 8
HT+L++LR
Sbjct: 21 HTALQILR 28


>sp|PURP_PYRAE|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum aerophilum (strain ATCC

Query: 1 HTSLRLLR 8
HT+L++LR
Sbjct: 27 HTALQILR 34


>sp|DPHB_HALLT|DIPHTHINE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HTSLRLLRQE 10
HT LRL +E
Sbjct: 92 HTDLRLRAEE 101




384|Sequence|1916|1925|LLRQELVVLC

>sp|AROE_PYRAB|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 1 LLRQELVVL 9
LLR+EL+V+
Sbjct: 195 LLRRELIVM 203


>sp|AROE_THEKO|SHIKIMATE dehydrogenase (NADP(+))|Thermococcus kodakarensis (strain ATCC

Query: 1 LLRQELVVL 9
LLR++LVV+
Sbjct: 204 LLRRDLVVM 212




385|Sequence|1921|1930|LVVLCHLHHP

>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus

Query: 4 LCHLHHP 10
LCHLH P
Sbjct: 36 LCHLHDP 42


>sp|SFSA_SULTO|SUGAR fermentation stimulation protein homolog|Sulfurisphaera tokodaii

Query: 4 LCHLHHP 10
+CHLH P
Sbjct: 30 ICHLHDP 36


>sp|Y1105_METKA|PUTATIVE nickel insertion protein|Methanopyrus kandleri (strain AV19 /

Query: 4 LCHLH 8
LCHLH
Sbjct: 114 LCHLH 118


>sp|SFSA_METST|SUGAR fermentation stimulation protein homolog|Methanosphaera

Query: 2 VVLCHLHHP 10
+ L HLH P
Sbjct: 29 ITLAHLHDP 37


>sp|SFSA_SACS2|SUGAR fermentation stimulation protein homolog|Saccharolobus

Query: 3 VLCHLHHP 10
+L HLH P
Sbjct: 53 ILVHLHDP 60


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 4 LCHLHH 9
LCH+H+
Sbjct: 383 LCHMHN 388


>sp|DCDB_METVS|DCTP deaminase, dUMP-forming|Methanococcus vannielii (strain ATCC

Query: 2 VVLCHLHH 9
+++C LHH
Sbjct: 65 IMVCPLHH 72


>sp|TBP_PYRWO|TATA-BOX-BINDING protein|Pyrococcus woesei

Query: 3 VLCHLHHP 10
++CHL P
Sbjct: 46 IICHLDDP 53


>sp|TBP_PYRFU|TATA-BOX-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VLCHLHHP 10
++CHL P
Sbjct: 46 IICHLDDP 53


>sp|SFSA_THEAC|SUGAR fermentation stimulation protein homolog|Thermoplasma acidophilum

Query: 4 LCHLHHP 10
L HLH P
Sbjct: 30 LAHLHDP 36


>sp|SFSA_SACI6|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 4 LCHLHHP 10
L HLH P
Sbjct: 54 LAHLHDP 60


>sp|SFSA_SACI4|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 4 LCHLHHP 10
L HLH P
Sbjct: 54 LAHLHDP 60


>sp|SFSA_SACI3|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 4 LCHLHHP 10
L HLH P
Sbjct: 54 LAHLHDP 60


>sp|SFSA_SACI2|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 4 LCHLHHP 10
L HLH P
Sbjct: 54 LAHLHDP 60


>sp|GATD_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain DSM

Query: 4 LCHLH 8
+CHLH
Sbjct: 226 VCHLH 230


>sp|GATD_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C7 /

Query: 4 LCHLH 8
+CHLH
Sbjct: 226 VCHLH 230


>sp|GATD_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C6 /

Query: 4 LCHLH 8
+CHLH
Sbjct: 226 VCHLH 230


>sp|GATD_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C5 /

Query: 4 LCHLH 8
+CHLH
Sbjct: 226 VCHLH 230


>sp|SFSA_THEVO|SUGAR fermentation stimulation protein homolog|Thermoplasma volcanium

Query: 2 VVLCHLHHP 10
+V HLH P
Sbjct: 28 IVEAHLHDP 36


>sp|Y3117_METAC|UPF0228 protein MA_3117|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VVLCHLH 8
VV+C++H
Sbjct: 132 VVVCYIH 138


>sp|FLPA_METHJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanospirillum hungatei JF-1

Query: 1 LVVLCHLH 8
+ LCH+H
Sbjct: 34 VAALCHIH 41




386|Sequence|1926|1935|HLHHPSLISL

>sp|RL15E_METHJ|LARGE ribosomal subunit protein eL15|Methanospirillum hungatei JF-1

Query: 3 HHPSLIS 9
HHPS+I+
Sbjct: 138 HHPSIIN 144


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LHHPSLIS 9
LH+PSLI+
Sbjct: 379 LHNPSLIA 386


>sp|ARTA_NATPD|ARCHAEOSORTASE A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LHHPSL 7
LHHPS+
Sbjct: 301 LHHPSV 306


>sp|RL15E_METAR|LARGE ribosomal subunit protein eL15|Methanocella arvoryzae (strain DSM

Query: 3 HHPSLIS 9
HHPS+ S
Sbjct: 138 HHPSIAS 144


>sp|GLCAE_SACS2|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HLHHPSLISL 10
++H PSL+S+
Sbjct: 214 YVHGPSLVSV 223


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LHHPSLISL 10
L HPS++S+
Sbjct: 325 LQHPSVLSV 333


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HLHHPSLISL 10
HL H S +SL
Sbjct: 776 HLKHDSYVSL 785


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 HLHHPSLI 8
HL PSLI
Sbjct: 417 HLEDPSLI 424


>sp|RL15E_METMJ|LARGE ribosomal subunit protein eL15|Methanoculleus marisnigri (strain

Query: 3 HHPSLIS 9
HHPS+ S
Sbjct: 138 HHPSIKS 144


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 HLHHPSLI 8
HL PSLI
Sbjct: 419 HLEDPSLI 426


>sp|RL15E_METB6|LARGE ribosomal subunit protein eL15|Methanoregula boonei (strain DSM

Query: 3 HHPSLIS 9
HHPS+ S
Sbjct: 138 HHPSIQS 144


>sp|HEM3_METTH|PROBABLE porphobilinogen deaminase|Methanothermobacter thermautotrophicus

Query: 3 HHPSL 7
HHPSL
Sbjct: 212 HHPSL 216


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 2 LHHPSLIS 9
L+HPS+I+
Sbjct: 327 LNHPSVIA 334


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LHHPSLIS 9
L+HPS+I+
Sbjct: 327 LNHPSVIA 334


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LHHPSLIS 9
L+HPS+I+
Sbjct: 327 LNHPSVIA 334


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LHHPSLISL 10
L HP LISL
Sbjct: 67 LVHPLLISL 75


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 HLHHPSLI 8
HL HP I
Sbjct: 615 HLEHPETI 622


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 2 LHHPSLISL 10
L +PSL+SL
Sbjct: 349 LSNPSLVSL 357




387|Sequence|1931|1940|SLISLLAAGI

***** No hits found ******


388|Sequence|1936|1945|LAAGIRPRML

>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LAAGIRP 7
LA+GIRP
Sbjct: 231 LASGIRP 237


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 1 LAAGIRPRML 10
LAAGI PR +
Sbjct: 199 LAAGIPPRKM 208


>sp|ENDA_HALVD|TRNA-SPLICING endonuclease|Haloferax volcanii (strain ATCC 29605

Query: 1 LAAGIRPRML 10
LA G+R RM+
Sbjct: 310 LAGGVRKRMV 319


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LAAGIRPRML 10
LAAG RP +L
Sbjct: 98 LAAGKRPTLL 107


>sp|Y1771_AERPE|MEMO1 family protein APE_1771|Aeropyrum pernix (strain ATCC 700893

Query: 3 AGIRPRML 10
AG++PR+L
Sbjct: 251 AGVKPRVL 258


>sp|RL3_SULTO|LARGE ribosomal subunit protein uL3|Sulfurisphaera tokodaii (strain DSM

Query: 2 AAGIRPR 8
+AG+RPR
Sbjct: 13 SAGVRPR 19


>sp|ENDA_HALSA|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 700922

Query: 1 LAAGIRPRML 10
LA G+R RM+
Sbjct: 313 LAHGVRKRMV 322


>sp|ENDA_HALS3|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 29341

Query: 1 LAAGIRPRML 10
LA G+R RM+
Sbjct: 313 LAHGVRKRMV 322


>sp|RL3_METS5|LARGE ribosomal subunit protein uL3|Metallosphaera sedula (strain ATCC

Query: 2 AAGIRPR 8
+AG+RPR
Sbjct: 13 SAGLRPR 19


>sp|RL3_SULAC|LARGE ribosomal subunit protein uL3|Sulfolobus acidocaldarius (strain

Query: 2 AAGIRPR 8
+AG+RPR
Sbjct: 13 SAGLRPR 19


>sp|RL3_SACS2|LARGE ribosomal subunit protein uL3|Saccharolobus solfataricus (strain

Query: 2 AAGIRPR 8
+AG+RPR
Sbjct: 13 SAGLRPR 19


>sp|RL3_SACI6|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 AAGIRPR 8
+AG+RPR
Sbjct: 13 SAGLRPR 19


>sp|RL3_SACI4|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 AAGIRPR 8
+AG+RPR
Sbjct: 13 SAGLRPR 19


>sp|RL3_SACI7|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 AAGIRPR 8
+AG+RPR
Sbjct: 13 SAGLRPR 19


>sp|RL3_SACI2|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 AAGIRPR 8
+AG+RPR
Sbjct: 13 SAGLRPR 19


>sp|RL3_SACI1|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 AAGIRPR 8
+AG+RPR
Sbjct: 13 SAGLRPR 19


>sp|RL3_SACI3|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 AAGIRPR 8
+AG+RPR
Sbjct: 13 SAGLRPR 19


>sp|ENDA_NATPD|TRNA-SPLICING endonuclease|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LAAGIRPRML 10
LA G+R RM+
Sbjct: 307 LAHGVRKRMV 316




389|Sequence|1941|1950|RPRMLVMELA

***** No hits found ******


390|Sequence|1946|1955|VMELASKGSL

>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VMELASKGS 9
VMELAS G+
Sbjct: 459 VMELASFGN 467


>sp|HEM1_PYRNV|GLUTAMYL-TRNA reductase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 MELASKG 8
MELAS+G
Sbjct: 187 MELASRG 193


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 2 MELASKGSL 10
+ELAS+G+L
Sbjct: 511 LELASEGNL 519


>sp|RRP41_ARCFU|EXOSOME complex component Rrp41|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MELASKGSL 10
+ELA KG+L
Sbjct: 219 IELAKKGAL 227


>sp|1A1D_PYRAB|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus abyssi

Query: 1 VMELASKGSL 10
+M+LA KG L
Sbjct: 294 LMDLAKKGDL 303


>sp|TMBL2_THEKO|DNA-BINDING HTH-type transcriptional repressor TrmBL2|Thermococcus kodakarensis

Query: 1 VMELASKGSL 10
+ME A KG L
Sbjct: 193 IMEYAKKGKL 202




391|Sequence|1951|1960|SKGSLDRLLQ

>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SKGSLDRL 8
+KG LDRL
Sbjct: 180 TKGQLDRL 187


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 2 KGSLDRLLQ 10
KG++DR L+
Sbjct: 387 KGAIDRALE 395


>sp|RFCS_HALMA|REPLICATION factor C small subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 SKGSLDRLL 9
S+ +LDRLL
Sbjct: 254 SRATLDRLL 262


>sp|RIFK_METBU|RIBOFLAVIN kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KGSLDRLL 9
+GS+DRL+
Sbjct: 48 EGSIDRLI 55


>sp|FEN_PYRCJ|FLAP endonuclease 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GSLDRLLQ 10
GSL++LLQ
Sbjct: 261 GSLEKLLQ 268




392|Sequence|1956|1965|DRLLQQDKAS

***** No hits found ******


393|Sequence|1961|1970|QDKASLTRTL

***** No hits found ******


394|Sequence|1966|1975|LTRTLQHRIA

***** No hits found ******


395|Sequence|1971|1980|QHRIALHVAD

>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QHRIALHVAD 10
QH+I L++AD
Sbjct: 14 QHKILLNIAD 23


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QHRIALHVAD 10
QH++ +VAD
Sbjct: 14 QHKVMFNVAD 23


>sp|RL34_THEPD|LARGE ribosomal subunit protein eL34|Thermofilum pendens (strain DSM

Query: 3 RIALHVAD 10
R+ALHV D
Sbjct: 22 RLALHVID 29


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HRIALHVAD 10
+RIA H+ D
Sbjct: 350 YRIAAHIGD 358


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 RIALHVAD 10
RIA HV D
Sbjct: 349 RIAAHVGD 356


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RIALHVAD 10
RIA H AD
Sbjct: 352 RIAAHAAD 359


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RIALHVAD 10
RIA HV D
Sbjct: 349 RIAAHVGD 356


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 RIALHVAD 10
RIA HV D
Sbjct: 349 RIAAHVGD 356


>sp|Y3527_METJA|UNCHARACTERIZED protein MJECL27|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HRIALHVAD 10
H++ LH+A+
Sbjct: 110 HKVRLHLAN 118


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RIALHVAD 10
RIA HV D
Sbjct: 349 RIAAHVGD 356


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 HRIALHVAD 10
+RIA H AD
Sbjct: 344 YRIAAHSAD 352


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 RIALHVAD 10
RIA HV D
Sbjct: 349 RIAAHVGD 356




396|Sequence|1976|1985|LHVADGLRYL

>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 ADGLRYL 10
ADG RYL
Sbjct: 46 ADGTRYL 52


>sp|Y1076_METJA|UNCHARACTERIZED ATP-binding protein MJ1076|Methanocaldococcus jannaschii (strain

Query: 4 ADGLRYL 10
ADG++YL
Sbjct: 258 ADGIKYL 264


>sp|MPTA_ARCFU|GTP cyclohydrolase MptA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VADGLRYL 10
V DG+RY+
Sbjct: 250 VEDGVRYM 257


>sp|HIS1_NATPD|ATP phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 ADGLRYL 10
ADG RYL
Sbjct: 206 ADGKRYL 212


>sp|DPCKG_CENSY|GTP-DEPENDENT dephospho-CoA kinase|Cenarchaeum symbiosum (strain A)

Query: 1 LHVADGLRY 9
+HV G+RY
Sbjct: 133 IHVDAGIRY 141


>sp|TRPD_METLZ|ANTHRANILATE phosphoribosyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 3 VADGLRY 9
+ADG++Y
Sbjct: 307 IADGIKY 313


>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 2 HVADGLR 8
HV DGLR
Sbjct: 252 HVMDGLR 258


>sp|HIS1_HALLT|ATP phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 4 ADGLRYL 10
ADG RYL
Sbjct: 217 ADGRRYL 223


>sp|CAPPA_HALSA|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 2 HVADGLRYL 10
H+AD RY
Sbjct: 420 HLADAARYF 428


>sp|CAPPA_HALS3|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 2 HVADGLRYL 10
H+AD RY
Sbjct: 420 HLADAARYF 428


>sp|TYW2_PYRHO|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 1 LHVADGLRY 9
+HV +G++Y
Sbjct: 91 VHVENGIKY 99




397|Sequence|1981|1990|GLRYLHSAMI

>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GLRYLHSAM 9
GLRY+H M
Sbjct: 291 GLRYIHVLM 299


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLRYLHSAM 9
GLRY+H M
Sbjct: 291 GLRYVHILM 299


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GLRYLHSAM 9
GLRY+H M
Sbjct: 291 GLRYVHILM 299


>sp|DCD_PYRCJ|DCTP deaminase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GLRYLHSAMI 10
G+R+LH +I
Sbjct: 139 GMRFLHLVLI 148


>sp|AROK_THEKO|SHIKIMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GLRYLHSAMI 10
G+R LHS+ +
Sbjct: 152 GMRVLHSSKV 161


>sp|EF1B_THEVO|ELONGATION factor 1-beta|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GLRYLHSAMI 10
GL+Y+H +I
Sbjct: 47 GLKYIHLEVI 56


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GLRYLHSA 8
GLR LH A
Sbjct: 659 GLRQLHDA 666


>sp|PSA_METB6|PROTEASOME subunit alpha|Methanoregula boonei (strain DSM 21154

Query: 1 GLRYLHSA 8
GL+ LHSA
Sbjct: 194 GLKALHSA 201


>sp|DCD_PYRNV|DCTP deaminase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GLRYLHSAMI 10
G+R+LH ++
Sbjct: 139 GMRFLHLILV 148


>sp|DCD_PYRIL|DCTP deaminase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GLRYLHSAMI 10
G+R+LH ++
Sbjct: 139 GMRFLHLILV 148




398|Sequence|1986|1995|HSAMIIYRDL

>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HSAMIIYRDL 10
HS M+I+R L
Sbjct: 62 HSPMVIFRGL 71


>sp|TRPC_METTM|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 1 HSAMIIYR 8
HSA+ IYR
Sbjct: 162 HSAIDIYR 169


>sp|Y1052_THEAC|UNCHARACTERIZED solute-binding protein Ta1052|Thermoplasma acidophilum (strain ATCC

Query: 2 SAMIIYRDL 10
SA I+Y+DL
Sbjct: 99 SAPILYQDL 107


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 1 HSAMIIYRDL 10
HS M+I R L
Sbjct: 65 HSPMVILRGL 74


>sp|ENDA_METTH|TRNA-SPLICING endonuclease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 HSAMIIYRDL 10
+S ++YRDL
Sbjct: 77 YSKYLVYRDL 86




399|Sequence|1991|2000|IYRDLKPHNV

>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IYRDLKPH 8
+ RDL+PH
Sbjct: 493 VVRDLRPH 500


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 3 RDLKPH 8
RD+KPH
Sbjct: 580 RDIKPH 585


>sp|PCNA3_AERPE|DNA polymerase sliding clamp 3|Aeropyrum pernix (strain ATCC 700893

Query: 3 RDLKPHN 9
RDL+PH+
Sbjct: 147 RDLEPHS 153


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IYRDLKPHNV 10
+Y+DLK N+
Sbjct: 337 LYKDLKARNI 346


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RDLKPHNV 10
RD+KPH V
Sbjct: 578 RDVKPHLV 585


>sp|CDC61_SACS2|ORC1-TYPE DNA replication protein 1|Saccharolobus solfataricus (strain ATCC

Query: 1 IYRDLKPHNV 10
+YR+ KP+N+
Sbjct: 50 LYREEKPNNI 59


>sp|CFBD_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 1 IYRDLKPHNV 10
I RDLK H V
Sbjct: 256 ITRDLKAHGV 265


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IYRDLKPHNV 10
+YR+LK N+
Sbjct: 337 LYRELKERNI 346


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RDLKPH 8
R+LKPH
Sbjct: 504 RELKPH 509


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 RDLKPH 8
R+LKPH
Sbjct: 504 RELKPH 509


>sp|SYR_METAC|ARGININE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RDLKPH 8
R+LKPH
Sbjct: 502 RELKPH 507


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 RDLKPH 8
RD+KPH
Sbjct: 561 RDVKPH 566


>sp|OTC_IGNH4|ORNITHINE carbamoyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RDLKPHNV 10
RDL+P+ V
Sbjct: 246 RDLRPYQV 253


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 RDLKPHNV 10
R+LKPH +
Sbjct: 493 RELKPHQL 500


>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IYRDLKPH 8
I RDL PH
Sbjct: 97 IERDLLPH 104


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 LKPHNV 10
KPHNV
Sbjct: 54 FKPHNV 59


>sp|PSA_METJA|PROTEASOME subunit alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DLKPHNV 10
D+KP NV
Sbjct: 204 DIKPENV 210


>sp|GCH1_HYPBU|GTP cyclohydrolase 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 IYRDLKPHNV 10
+YR ++PH +
Sbjct: 175 VYRIIEPHRL 184


>sp|SPEH_ARCFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IYRDLKPHNV 10
+Y+ PH V
Sbjct: 44 VYKQFNPHGV 53


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IYRDLKP 7
+YR LKP
Sbjct: 375 VYRTLKP 381


>sp|SRP54_PYRAB|SIGNAL recognition particle 54 kDa|Pyrococcus abyssi (strain GE5 /

Query: 1 IYRDLKPHNV 10
I ++KPH V
Sbjct: 207 ISNEIKPHEV 216


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DLKPH 8
DLKPH
Sbjct: 566 DLKPH 570


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IYRDLKPHNV 10
++ D+KP N+
Sbjct: 457 VHLDVKPQNI 466


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IYRDLKPH 8
IY+D KP+
Sbjct: 88 IYKDNKPY 95


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 1 IYRDLKPH 8
IY+D KP+
Sbjct: 88 IYKDNKPY 95


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IYRDLKPHNV 10
+Y++LK N+
Sbjct: 337 LYKELKERNI 346


>sp|G3PP_METKA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 2 YRDLKPHN 9
Y+D++P N
Sbjct: 201 YQDMEPRN 208


>sp|HIS8_PYRFU|HISTIDINOL-PHOSPHATE aminotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IYRDLKPHNV 10
+YR L P+N+
Sbjct: 226 LYRILPPYNL 235




400|Sequence|1996|2005|KPHNVLLFTL

>sp|CDC61_AERPE|ORC1-TYPE DNA replication protein 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 KPHNVLLFTL 10
KP N LL+ L
Sbjct: 51 KPSNALLYGL 60


>sp|NTPTH_METKA|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanopyrus kandleri (strain AV19 /

Query: 2 PHNVLL 7
PHNV+L
Sbjct: 2 PHNVVL 7


>sp|RL23_METKA|LARGE ribosomal subunit protein uL23|Methanopyrus kandleri (strain AV19

Query: 2 PHNVLLF 8
PH+VLL+
Sbjct: 12 PHDVLLY 18


>sp|SYD_PYRAE|ASPARTATE--TRNA(ASP) ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KPHNVLLFTL 10
+P N+++FT+
Sbjct: 130 RPRNLVVFTV 139




401|Sequence|2001|2010|LLFTLYPNAA

>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLFTLYPNAA 10
LLF LYP++A
Sbjct: 23 LLFQLYPSSA 32


>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 4 TLYPNAA 10
TLYP AA
Sbjct: 325 TLYPKAA 331


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 TLYPNAA 10
TLYP AA
Sbjct: 325 TLYPKAA 331




402|Sequence|2006|2015|YPNAAIIAKI

>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 2 PNAAIIAKI 10
PNA ++AKI
Sbjct: 504 PNARVLAKI 512


>sp|AATC_METST|A-TYPE ATP synthase subunit C|Methanosphaera stadtmanae (strain ATCC

Query: 1 YPNAAIIAKI 10
YPNA + AKI
Sbjct: 51 YPNARVRAKI 60


>sp|PIMT_METTH|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothermobacter thermautotrophicus

Query: 3 NAAIIAKI 10
NAA+IA+I
Sbjct: 89 NAAVIAEI 96


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 YPNAAIIAKI 10
YP A I AKI
Sbjct: 315 YPIAKIAAKI 324




403|Sequence|2011|2020|IIAKIADYGI

>sp|PELO_HALMA|PROTEIN pelota homolog|Haloarcula marismortui (strain ATCC 43049

Query: 2 IAKIADYG 9
+AK ADYG
Sbjct: 280 VAKAADYG 287


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 1 IIAKIADYG 9
++AKI DYG
Sbjct: 13 LLAKIGDYG 21


>sp|PURE_ARCFU|PHOSPHORIBOSYLAMINOIMIDAZOLE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIAKIADYGI 10
I +K+AD+GI
Sbjct: 45 IASKLADFGI 54


>sp|RS4_METBF|SMALL ribosomal subunit protein uS4|Methanosarcina barkeri (strain

Query: 1 IIAKIADYGI 10
I+AK+ YGI
Sbjct: 81 ILAKLIRYGI 90


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 IAKIADYGI 10
+AK+ +YG+
Sbjct: 150 VAKVPNYGV 158


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 IAKIADYGI 10
+AK+ +YG+
Sbjct: 150 VAKVPNYGV 158


>sp|RL18_THEVO|LARGE ribosomal subunit protein uL18|Thermoplasma volcanium (strain

Query: 1 IIAKIADYGI 10
IIA+IA+Y +
Sbjct: 36 IIAQIAEYSV 45


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IIAKIADY 8
+I KIADY
Sbjct: 107 LIGKIADY 114


>sp|CDC62_THEAC|ORC1-TYPE DNA replication protein 2|Thermoplasma acidophilum (strain ATCC

Query: 1 IIAKIADYGI 10
++ ++ADYG+
Sbjct: 343 LLTELADYGL 352


>sp|PYRE_HYPBU|OROTATE phosphoribosyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 IAKIADYGI 10
+ ++ADYG+
Sbjct: 155 VERLADYGV 163




404|Sequence|2016|2025|ADYGIAQYCC

>sp|RPO10_METPE|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanosphaerula palustris (strain

Query: 2 DYGIAQYCC 10
D G+ QYCC
Sbjct: 36 DLGLTQYCC 44


>sp|RPO10_METB6|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanoregula boonei (strain DSM

Query: 2 DYGIAQYCC 10
D GI +YCC
Sbjct: 36 DLGITRYCC 44


>sp|RPO10_NANEQ|DNA-DIRECTED RNA polymerase subunit Rpo10|Nanoarchaeum equitans (strain

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGLERYCC 45


>sp|RPO10_METTP|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanothrix thermoacetophila

Query: 2 DYGIAQYCC 10
D GI +YCC
Sbjct: 35 DLGIERYCC 43


>sp|RPO10_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermoplasma acidophilum (strain

Query: 2 DYGIAQYCC 10
D GI +YCC
Sbjct: 46 DLGIERYCC 54


>sp|RPO10_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfurisphaera tokodaii (strain DSM

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVKRYCC 45


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 1 ADYGIAQYCC 10
AD G+A CC
Sbjct: 66 ADAGLAAECC 75


>sp|RPO10_METJA|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocaldococcus jannaschii

Query: 2 DYGIAQYCC 10
D GI +YCC
Sbjct: 37 DLGIKKYCC 45


>sp|RPO10_STAMF|DNA-DIRECTED RNA polymerase subunit Rpo10|Staphylothermus marinus (strain ATCC

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVKRYCC 45


>sp|RPO10_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermoplasma volcanium (strain ATCC

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 46 DLGVERYCC 54


>sp|RPO10_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus shibatae (strain ATCC

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVKRYCC 45


>sp|RPO10_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVKRYCC 45


>sp|RPO10_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVKRYCC 45


>sp|RPO10_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVKRYCC 45


>sp|RPO10_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVKRYCC 45


>sp|RPO10_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVKRYCC 45


>sp|RPO10_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVKRYCC 45


>sp|RPO10_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus solfataricus (strain

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVKRYCC 45


>sp|RPO10_METVS|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcus vannielii (strain ATCC

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVTKYCC 45


>sp|RPO10_METAR|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocella arvoryzae (strain DSM

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 45 DLGVERYCC 53


>sp|RPO10_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum aerophilum (strain ATCC

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVTRYCC 45


>sp|SYH_NATPD|HISTIDINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ADYGIAQYC 9
AD+G+ ++C
Sbjct: 250 ADFGVREFC 258


>sp|RPO10_METMJ|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanoculleus marisnigri (strain

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 36 DLGLERYCC 44


>sp|RPO10_METBF|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanosarcina barkeri (strain

Query: 2 DYGIAQYCC 10
D GI +YCC
Sbjct: 36 DLGITRYCC 44


>sp|RPO10_METAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanosarcina acetivorans (strain

Query: 2 DYGIAQYCC 10
D GI +YCC
Sbjct: 36 DLGITRYCC 44


>sp|RPO10_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo10|Picrophilus torridus (strain ATCC

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 47 DLGVKRYCC 55


>sp|RPO10_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum arsenaticum (strain DSM

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGLVRYCC 45


>sp|RS7_METTH|SMALL ribosomal subunit protein uS7|Methanothermobacter

Query: 2 DYGIAQYCC 10
D G+A+Y C
Sbjct: 17 DMGLAKYIC 25


>sp|RPO10_METMA|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanosarcina mazei (strain ATCC

Query: 2 DYGIAQYCC 10
D GI +YCC
Sbjct: 36 DLGITRYCC 44


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 1 ADYGIAQ 7
AD+G+AQ
Sbjct: 236 ADFGVAQ 242


>sp|RPO10_THEON|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermococcus onnurineus (strain NA1)

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVERYCC 45


>sp|RPO10_METHJ|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanospirillum hungatei JF-1

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 36 DLGMDRYCC 44


>sp|RFRNP_STAMF|RNA-FREE ribonuclease P|Staphylothermus marinus (strain ATCC 43588

Query: 2 DYGIAQ 7
DYG+AQ
Sbjct: 127 DYGVAQ 132


>sp|RPO10_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermococcus kodakarensis (strain

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGVERYCC 45


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YGIAQYCC 10
YGI CC
Sbjct: 185 YGIDTICC 192


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DYGIAQY 8
DYGIA Y
Sbjct: 604 DYGIAIY 610


>sp|RPO10_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrococcus furiosus (strain ATCC

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGLERYCC 45


>sp|RPO10_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrococcus abyssi (strain GE5 /

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGLERYCC 45


>sp|RPO10_HALWD|DNA-DIRECTED RNA polymerase subunit Rpo10|Haloquadratum walsbyi (strain DSM

Query: 2 DYGIAQYCC 10
D GI ++CC
Sbjct: 38 DLGIKRHCC 46


>sp|RPO10_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrococcus horikoshii (strain ATCC

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 37 DLGLERYCC 45


>sp|RPO10_METTH|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanothermobacter

Query: 2 DYGIAQYCC 10
D G+ +YCC
Sbjct: 36 DLGLKRYCC 44


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 DYGIAQYC 9
DY I YC
Sbjct: 180 DYKIVPYC 187


>sp|HCY_NATPH|HALOCYANIN pharaonis (Natronobacterium pharaonis)

Query: 2 DYGIAQYCC 10
D G+A Y C
Sbjct: 140 DEGVALYVC 148




405|Sequence|2021|2030|AQYCCRMGIK

>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AQYCCRMGIK 10
A YC R GI+
Sbjct: 246 ADYCSREGIE 255


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 AQYCCRMGIK 10
+Q C R+G+K
Sbjct: 366 SQECTRLGMK 375


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QYCCRMGIK 10
Q C R+G+K
Sbjct: 367 QECTRLGMK 375


>sp|HISX_PYRFU|HISTIDINOL dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AQYCCRMGI 9
A YC R GI
Sbjct: 245 ADYCNREGI 253


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 QYCCRMG 8
QYC R+G
Sbjct: 269 QYCDRVG 275


>sp|RPO10_METPE|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanosphaerula palustris (strain

Query: 1 AQYCCR 6
QYCCR
Sbjct: 40 TQYCCR 45


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 3 YCCRMGIK 10
YCC M ++
Sbjct: 432 YCCYMDVR 439




406|Sequence|2026|2035|RMGIKTSEGT

>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RMGIKTSEGT 10
R+GI+TS+ T
Sbjct: 120 RVGIRTSDTT 129


>sp|Y1463_THESM|UPF0127 protein TSIB_1463|Thermococcus sibiricus (strain DSM 12597

Query: 1 RMGIKTSEGT 10
++GIK S GT
Sbjct: 132 KIGIKNSNGT 141


>sp|PSA_AERPE|PROTEASOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 2 MGIKTSEG 9
+GIKT+EG
Sbjct: 42 LGIKTNEG 49


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 RMGIKTSE 8
+MGI TSE
Sbjct: 350 KMGISTSE 357


>sp|PSB1_DESA1|PROTEASOME subunit beta 1|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 MGIKTSEG 9
+G+KTSEG
Sbjct: 11 IGLKTSEG 18


>sp|PSA_METS3|PROTEASOME subunit alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 MGIKTSEG 9
+GIK SEG
Sbjct: 39 IGIKCSEG 46


>sp|PSB2_PYRCJ|PROTEASOME subunit beta 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 MGIKTSEG 9
+GIKT EG
Sbjct: 12 VGIKTKEG 19


>sp|PSB_HALVD|PROTEASOME subunit beta|Haloferax volcanii (strain ATCC 29605

Query: 2 MGIKTSEG 9
+GIKT EG
Sbjct: 53 VGIKTEEG 60


>sp|IF2G_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6 /

Query: 1 RMGIKTSEG 9
R GIK +EG
Sbjct: 253 RPGIKVTEG 261


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7 /

Query: 1 RMGIKTSEG 9
R GIK +EG
Sbjct: 253 RPGIKVTEG 261


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 1 RMGIKTSEG 9
R GIK +EG
Sbjct: 253 RPGIKVTEG 261


>sp|PSA_METMJ|PROTEASOME subunit alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 MGIKTSEGT 10
+GIK SEG
Sbjct: 39 VGIKCSEGV 47




407|Sequence|2031|2040|TSEGTPGFRA

>sp|Y1949_ARCFU|UNCHARACTERIZED protein AF_1949|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EGTPGFRA 10
+GTPGF A
Sbjct: 141 KGTPGFEA 148


>sp|Y544_METTH|UPF0145 protein MTH_544|Methanothermobacter thermautotrophicus (strain

Query: 1 TSEGTPGFRA 10
TS PG+RA
Sbjct: 12 TSNYVPGYRA 21


>sp|Y583_METTM|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 2 SEGTPG 7
SEGTPG
Sbjct: 219 SEGTPG 224


>sp|DUT_METTH|PROBABLE deoxyuridine 5'-triphosphate

Query: 1 TSEGTPGFRA 10
T+ G PGFR
Sbjct: 99 TAVGDPGFRG 108


>sp|DUT_METKA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanopyrus

Query: 1 TSEGTPGFRA 10
T+ G PGFR
Sbjct: 103 TALGDPGFRG 112


>sp|FTHS_THEVO|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TSEGTPGF 8
T+EG P F
Sbjct: 245 TTEGVPAF 252


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TSEGTPGF 8
T EGTP F
Sbjct: 277 TIEGTPAF 284


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 EGTPGFRA 10
EG P FRA
Sbjct: 179 EGDPEFRA 186


>sp|ILVC_NATPD|KETOL-ACID reductoisomerase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 3 EGTPGFRA 10
EGTPG A
Sbjct: 146 EGTPGLLA 153


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TSEGTPGF 8
T+EG P F
Sbjct: 245 TTEGVPAF 252


>sp|RS6E_PYRAR|SMALL ribosomal subunit protein eS6|Pyrobaculum arsenaticum (strain DSM

Query: 2 SEGTPGFR 9
+EG PG+R
Sbjct: 82 AEGPPGYR 89


>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 3 EGTPGFRA 10
EGTPG A
Sbjct: 168 EGTPGLVA 175




408|Sequence|2036|2045|PGFRAPEVAR

>sp|Y1514_ARCFU|UNCHARACTERIZED protein AF_1514|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GFRAPEV 8
G+RAPEV
Sbjct: 45 GYRAPEV 51


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 PGFRAPEVA 9
PGFR PE A
Sbjct: 427 PGFREPEKA 435


>sp|GGGPS_THEPD|GERANYLGERANYLGLYCERYL phosphate synthase|Thermofilum pendens (strain DSM 2475

Query: 2 GFRAPEVAR 10
G R+PEVA+
Sbjct: 204 GIRSPEVAK 212


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 1 PGFRAP 6
PGFR P
Sbjct: 416 PGFREP 421


>sp|ALDC_METMA|ALPHA-ACETOLACTATE decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GFRAPEVAR 10
GFR PE +
Sbjct: 212 GFRTPEYVK 220


>sp|GGGPS_METKA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 GFRAPEVAR 10
G R+PE AR
Sbjct: 198 GIRSPETAR 206


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 2 GFRAPEVAR 10
GF APEV R
Sbjct: 50 GFMAPEVRR 58


>sp|GGGPS_KORCO|GERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GFRAPEVAR 10
G R+PE+ R
Sbjct: 201 GLRSPELVR 209


>sp|RL32_NANEQ|LARGE ribosomal subunit protein eL32|Nanoarchaeum equitans (strain

Query: 1 PGFRAPEVAR 10
PG+R+P R
Sbjct: 69 PGYRSPRKVR 78


>sp|KAE1B_METLZ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GFRAPEVAR 10
G+R PE+ R
Sbjct: 361 GYRVPELDR 369




409|Sequence|2041|2050|PEVARGNVIY

>sp|MOAC_ARCFU|PROBABLE cyclic pyranopterin monophosphate synthase|Archaeoglobus fulgidus

Query: 2 EVARGNVI 9
EVA+GNVI
Sbjct: 46 EVAKGNVI 53


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PEVARGN 7
PE+A+GN
Sbjct: 58 PEIAKGN 64


>sp|CPGS_METST|CYCLIC 2,3-diphosphoglycerate synthetase|Methanosphaera stadtmanae (strain

Query: 1 PEVARGNVIY 10
PE+ RG+ I+
Sbjct: 182 PEIVRGDKIH 191


>sp|HUTI_THEAC|IMIDAZOLONEPROPIONASE acidophilum (strain ATCC 25905

Query: 3 VARGNVIY 10
++RGN++Y
Sbjct: 390 ISRGNILY 397


>sp|RL2_ARCFU|LARGE ribosomal subunit protein uL2|Archaeoglobus fulgidus (strain ATCC

Query: 2 EVARGNVIY 10
E+A GN+ Y
Sbjct: 87 EIASGNITY 95


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 2 EVARGNVI 9
EVA GNVI
Sbjct: 129 EVAAGNVI 136


>sp|Y376_METTP|UPF0282 protein Mthe_0376|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PEVARGNVIY 10
P++ RG ++Y
Sbjct: 84 PDLYRGKIVY 93


>sp|UPPS_PYRAE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrobaculum

Query: 1 PEVARGNVIY 10
PEV R +++Y
Sbjct: 215 PEVEREDLVY 224


>sp|CSL4_ARCFU|EXOSOME complex component Csl4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEVARGNVI 9
PE+ +G+V+
Sbjct: 53 PEIVKGDVV 61


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PEVARGNVIY 10
PE+ RG + Y
Sbjct: 361 PELLRGKIRY 370


>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 EVARGNVIY 10
E+ RG V+Y
Sbjct: 308 ELERGGVVY 316




410|Sequence|2046|2055|GNVIYNQQAD

>sp|IF5A_NANEQ|TRANSLATION initiation factor 5A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GNVIYNQQ 8
GN IYN+Q
Sbjct: 14 GNYIYNEQ 21


>sp|Y1458_METJA|UNCHARACTERIZED protein MJ1458|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNVIYNQQ 8
GN+ Y QQ
Sbjct: 28 GNITYTQQ 35


>sp|SYY_METMA|TYROSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GNVIYNQQAD 10
GN++YN ++
Sbjct: 273 GNLVYNSYSE 282


>sp|GGGPS_ARCFU|GERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GNVIYNQQAD 10
GNVIY + D
Sbjct: 215 GNVIYEKGID 224


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 3 VIYNQQA 9
VIYN+QA
Sbjct: 206 VIYNKQA 212


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GNVIYNQQAD 10
G V+Y ++AD
Sbjct: 446 GEVVYLERAD 455


>sp|PFDA_METM7|PREFOLDIN subunit alpha|Methanococcus maripaludis (strain C7 /

Query: 4 IYNQQAD 10
+YNQQ D
Sbjct: 14 VYNQQVD 20




411|Sequence|2051|2060|NQQADVYSFG

>sp|GCK_SULTO|GLYCERATE 2-kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 QADVYSFG 10
+ D YSFG
Sbjct: 263 RGDAYSFG 270


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NQQADVYSF 9
N+ ADVY++
Sbjct: 20 NKTADVYTY 28




412|Sequence|2056|2065|VYSFGLLLYD

>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VYSFGLLLYD 10
VY F L+LY+
Sbjct: 347 VYLFDLMLYE 356


>sp|KHSE_SACI7|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YSFGLLLY 9
YSF +LL+
Sbjct: 166 YSFNILLF 173


>sp|KHSE_SACI6|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YSFGLLLY 9
YSF +LL+
Sbjct: 166 YSFNILLF 173


>sp|KHSE_SACI4|HOMOSERINE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YSFGLLLY 9
YSF +LL+
Sbjct: 166 YSFNILLF 173


>sp|KHSE_SACI3|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 YSFGLLLY 9
YSF +LL+
Sbjct: 166 YSFNILLF 173


>sp|KHSE_SACI2|HOMOSERINE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YSFGLLLY 9
YSF +LL+
Sbjct: 166 YSFNILLF 173


>sp|KHSE_SACI1|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YSFGLLLY 9
YSF +LL+
Sbjct: 166 YSFNILLF 173


>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 2 YSFGLLLYD 10
+SFG LYD
Sbjct: 229 FSFGKGLYD 237




413|Sequence|2061|2070|LLLYDILTTG

>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 2 LLYDILTTG 10
L YD+LT G
Sbjct: 202 LAYDVLTLG 210


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LYDILTTG 10
LYD+ TTG
Sbjct: 117 LYDLDTTG 124


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 LLLYDIL 7
+LLYDIL
Sbjct: 343 VLLYDIL 349


>sp|KPRS_THEAC|RIBOSE-PHOSPHATE pyrophosphokinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LLLYDILTTG 10
L+L DI++TG
Sbjct: 207 LILDDIISTG 216


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 LLLYDILT 8
L LYD+LT
Sbjct: 123 LKLYDLLT 130


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 LLYDILTTG 10
++ DILTTG
Sbjct: 98 IVRDILTTG 106


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 4 YDILTTG 10
YDI+ TG
Sbjct: 341 YDIVVTG 347


>sp|COFC_HALWD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LLYDILTT 9
+LYD+++T
Sbjct: 32 MLYDVIST 39


>sp|HPRL2_HALMA|HGPRTASE-LIKE protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 LLLYDILTTG 10
L+L D+L+TG
Sbjct: 118 LVLDDVLSTG 127


>sp|HPRL2_HALJB|HGPRTASE-LIKE protein 2|Halalkalicoccus jeotgali (strain DSM 18796

Query: 1 LLLYDILTTG 10
L+L D+L+TG
Sbjct: 118 LVLDDVLSTG 127


>sp|HPRL_HALMD|HGPRTASE-LIKE protein|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 LLLYDILTTG 10
L+L D+L+TG
Sbjct: 118 LVLDDVLSTG 127




414|Sequence|2066|2075|ILTTGGRIVE

>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 ILTTGGRIVE 10
I +TGG IVE
Sbjct: 133 ITSTGGEIVE 142


>sp|3MGH_METMJ|PUTATIVE 3-methyladenine DNA glycosylase|Methanoculleus marisnigri (strain

Query: 2 LTTGGRIVE 10
+TT GRIVE
Sbjct: 30 VTTAGRIVE 38


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILTTGGRIVE 10
I +TGG IVE
Sbjct: 133 ITSTGGEIVE 142


>sp|PSTB1_HALSA|PHOSPHATE import ATP-binding protein PstB|Halobacterium salinarum (strain

Query: 1 ILTTGGRIVE 10
+ TGG++VE
Sbjct: 247 VFLTGGKLVE 256


>sp|GLCAE_SULTO|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ILTTGGRIVE 10
++T+GG+I E
Sbjct: 97 VITSGGKIEE 106


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 1 ILTTGGRIVE 10
I +TGG I+E
Sbjct: 133 ITSTGGDIIE 142


>sp|RL39_METKA|LARGE ribosomal subunit protein eL39|Methanopyrus kandleri (strain AV19

Query: 1 ILTTGGRIVE 10
+ TGGR+++
Sbjct: 28 VAKTGGRVID 37


>sp|PGMI_PYRAE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum aerophilum

Query: 2 LTTGGRIVE 10
+TTGGR+ +
Sbjct: 112 ITTGGRLAQ 120


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LTTGGRIV 9
+TTGGR++
Sbjct: 423 VTTGGRVL 430


>sp|PGMI_AERPE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Aeropyrum pernix (strain

Query: 2 LTTGGRIVE 10
+T+GGR++E
Sbjct: 109 VTSGGRLLE 117


>sp|BIOB_META3|BIOTIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LTTGGRIVE 10
LTT GR +E
Sbjct: 303 LTTNGRNIE 311


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 2 LTTGGRIVE 10
+T+GGR+ E
Sbjct: 105 ITSGGRLSE 113


>sp|PSTB1_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain ATCC

Query: 1 ILTTGGRIVE 10
+ TGG +VE
Sbjct: 265 VFLTGGELVE 274


>sp|THSB_DESM0|CHAPERONIN subunit beta|Desulfurococcus mucosus (strain ATCC 35584

Query: 3 TTGGRIV 9
TGGRIV
Sbjct: 328 ATGGRIV 334


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 1 ILTTGGRIV 9
+L GGR+V
Sbjct: 297 VLEAGGRVV 305


>sp|DHYS_SACI7|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 ILTTGGRI 8
I+TTGG I
Sbjct: 87 IVTTGGTI 94


>sp|DHYS_SACI4|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ILTTGGRI 8
I+TTGG I
Sbjct: 87 IVTTGGTI 94


>sp|DHYS_SACI3|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 ILTTGGRI 8
I+TTGG I
Sbjct: 87 IVTTGGTI 94


>sp|DHYS_SACI2|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 ILTTGGRI 8
I+TTGG I
Sbjct: 87 IVTTGGTI 94


>sp|DHYS_SACI1|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 ILTTGGRI 8
I+TTGG I
Sbjct: 87 IVTTGGTI 94


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 ILTTGGRIV 9
+L GGR+V
Sbjct: 297 VLEAGGRVV 305


>sp|DHYS_SACI6|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ILTTGGRI 8
I+TTGG I
Sbjct: 87 IVTTGGTI 94


>sp|PSTB3_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain ATCC

Query: 1 ILTTGGRIVE 10
+ TGG +VE
Sbjct: 241 VFLTGGNLVE 250


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILTTGGRIV 9
+L +GGR+V
Sbjct: 464 LLESGGRVV 472


>sp|RL37A_ARCFU|LARGE ribosomal subunit protein eL43|Archaeoglobus fulgidus (strain

Query: 2 LTTGGRIVE 10
+T GG+IVE
Sbjct: 71 VTPGGKIVE 79


>sp|CBIT_SACS2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 ILTTGGRIV 9
I+ GGRIV
Sbjct: 134 IINKGGRIV 142


>sp|PSTB2_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain ATCC

Query: 1 ILTTGGRIVE 10
+ TGG +VE
Sbjct: 279 VFLTGGELVE 288


>sp|DPO4_METMJ|DNA polymerase IV|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LTTGGRIV 9
+TTG RIV
Sbjct: 1 MTTGSRIV 8




415|Sequence|2071|2080|GRIVEGLKFP

>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GRIVEGLKFP 10
GR+ EG+ FP
Sbjct: 486 GRLSEGINFP 495


>sp|HIS6_NITMS|IMIDAZOLE glycerol phosphate synthase subunit|Nitrosopumilus maritimus

Query: 1 GRIVEGLKF 9
GR+V+GL F
Sbjct: 15 GRVVKGLNF 23


>sp|HIS6_THEON|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus onnurineus

Query: 1 GRIVEGLKF 9
GR+V+G+KF
Sbjct: 15 GRVVKGIKF 23


>sp|HIS6_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 1 GRIVEGLKF 9
GR+V+G+KF
Sbjct: 15 GRVVKGIKF 23


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 1 GRIVEGLKFP 10
GRIVE KFP
Sbjct: 197 GRIVEIKKFP 206


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 1 GRIVEGLKFP 10
GRIVE KFP
Sbjct: 197 GRIVEIKKFP 206


>sp|HIS6_THEGJ|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus gammatolerans

Query: 1 GRIVEGLKF 9
GR+V+G+KF
Sbjct: 15 GRVVKGIKF 23


>sp|HIS6_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 1 GRIVEGLKF 9
GR+V+G+KF
Sbjct: 15 GRVVKGIKF 23


>sp|RS4E_METS3|SMALL ribosomal subunit protein eS4|Methanobrevibacter smithii (strain

Query: 1 GRIVEGLKFP 10
GR+++ KFP
Sbjct: 75 GRVIKDYKFP 84


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 1 GRIVEGLKF 9
GR+V+G KF
Sbjct: 15 GRVVKGTKF 23


>sp|HIS6_METS3|IMIDAZOLE glycerol phosphate synthase subunit|Methanobrevibacter smithii

Query: 1 GRIVEGLKF 9
GR+V+G++F
Sbjct: 19 GRVVKGVEF 27


>sp|HIS6_METST|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaera stadtmanae

Query: 1 GRIVEGLKF 9
GR+V+G++F
Sbjct: 19 GRVVKGVEF 27


>sp|ARGC_METTH|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RIVEGLKFP 10
R VEGL FP
Sbjct: 322 REVEGLDFP 330


>sp|HIS6_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 1 GRIVEGLKF 9
GR+V+G++F
Sbjct: 19 GRVVKGVEF 27


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 1 GRIVEGLKFP 10
GRIVE +FP
Sbjct: 197 GRIVEIKRFP 206


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GRIVEGLK 8
GR+ EGLK
Sbjct: 262 GRVSEGLK 269


>sp|HIS6_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 1 GRIVEGLKF 9
GR+V+G++F
Sbjct: 16 GRVVKGVRF 24


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GRIVEGLKF 9
G IV+GLK+
Sbjct: 125 GAIVKGLKY 133


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GRIVEGLK 8
GRI+ G+K
Sbjct: 436 GRIINGMK 443


>sp|HIS6_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 1 GRIVEGLKF 9
GR+V+G+ F
Sbjct: 15 GRVVKGVNF 23


>sp|HIS6_METLZ|IMIDAZOLE glycerol phosphate synthase subunit|Methanocorpusculum labreanum

Query: 1 GRIVEGLKF 9
GR+V+G+ F
Sbjct: 16 GRVVKGVNF 24


>sp|FLPA_SULAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfolobus acidocaldarius

Query: 1 GRIVEGLKF 9
G IV+GLK+
Sbjct: 63 GAIVKGLKY 71


>sp|DHE2_HALSI|NAD-SPECIFIC glutamate dehydrogenase A|Halobacterium salinarum (Halobacterium

Query: 3 IVEGLKFP 10
IVE LK+P
Sbjct: 48 IVERLKYP 55


>sp|HIS6_IGNH4|IMIDAZOLE glycerol phosphate synthase subunit|Ignicoccus hospitalis (strain

Query: 1 GRIVEGLKF 9
GR+V+G+ F
Sbjct: 16 GRVVKGVSF 24


>sp|Y796_METKA|UPF0288 protein MK0796|Methanopyrus kandleri (strain AV19 /

Query: 1 GRIVEGL 7
GR+VEGL
Sbjct: 481 GRVVEGL 487


>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 RIVEGLKFP 10
+I++GL FP
Sbjct: 49 KILDGLVFP 57


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GRIVEGLKFP 10
GR+V G ++P
Sbjct: 142 GRVVRGEEYP 151


>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus

Query: 1 GRIVEGLKF 9
GR+V+G F
Sbjct: 15 GRVVKGTNF 23


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GRIVEGLKF 9
GR++EG+++
Sbjct: 337 GRVIEGVEW 345


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 1 GRIVEGLKFP 10
GR+ +GL+ P
Sbjct: 360 GRVYDGLEVP 369


>sp|HIS6_METM5|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 GRIVEGLKF 9
GR+V+G F
Sbjct: 15 GRVVKGTNF 23


>sp|HIS6_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii

Query: 1 GRIVEGLKF 9
GR+V+G+ F
Sbjct: 15 GRVVKGVNF 23


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GRIVEGLKFP 10
GR+ +GL+ P
Sbjct: 360 GRVYDGLEVP 369


>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RIVEGLKFP 10
RI +GLK P
Sbjct: 348 RIPKGLKIP 356


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 RIVEGLKFP 10
++ EGL FP
Sbjct: 684 KLAEGLGFP 692


>sp|HIS6_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 GRIVEGLKF 9
GR+V+G F
Sbjct: 15 GRVVKGTNF 23


>sp|HIS6_METM7|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 GRIVEGLKF 9
GR+V+G F
Sbjct: 15 GRVVKGTNF 23


>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GRIVEGLKF 9
G + EGLK+
Sbjct: 295 GSLAEGLKY 303


>sp|IDI2_NATPD|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RIVEGLKFP 10
R+V+GL P
Sbjct: 184 RVVDGLSVP 192


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 GRIVEGLK 8
GRI++G++
Sbjct: 411 GRIIQGMR 418


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 GRIVEGLKFP 10
G+IV+ LK P
Sbjct: 154 GKIVKKLKHP 163


>sp|HIS6_METS5|IMIDAZOLE glycerol phosphate synthase subunit|Metallosphaera sedula (strain

Query: 1 GRIVEGLKF 9
G++V+G++F
Sbjct: 15 GKVVKGVRF 23


>sp|HIS6_METVS|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus vannielii

Query: 1 GRIVEGLKF 9
GR+V+G F
Sbjct: 15 GRVVKGTNF 23


>sp|HIS6_METHJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanospirillum hungatei

Query: 1 GRIVEGLKF 9
GR+V+G F
Sbjct: 16 GRVVKGTNF 24


>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 1 GRIVEGLKFP 10
G+IVE +FP
Sbjct: 197 GKIVEVRQFP 206


>sp|HIS6_METM6|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 GRIVEGLKF 9
GR+V+G F
Sbjct: 15 GRVVKGTNF 23


>sp|RL4_THEAC|LARGE ribosomal subunit protein uL4|Thermoplasma acidophilum (strain ATCC

Query: 2 RIVEGLKFP 10
R EGLK P
Sbjct: 134 RFKEGLKLP 142




416|Sequence|2076|2085|GLKFPNEFDE

>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 LKFPNEFDE 10
++ PNEFDE
Sbjct: 260 IEVPNEFDE 268


>sp|CS3HD_SACS2|CRISPR-ASSOCIATED endonuclease Cas3-HD|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KFPNEFDE 10
KFP+ FDE
Sbjct: 139 KFPDNFDE 146


>sp|BPL_METJA|PUTATIVE biotin ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLKFPNEF 8
GLKFPN+
Sbjct: 89 GLKFPNDI 96


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GLKFPNEFDE 10
GLK P E+DE
Sbjct: 454 GLKDPVEYDE 463


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 LKFPNEFD 9
++ PNEFD
Sbjct: 257 IEVPNEFD 264


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 2 LKFPNEFD 9
++ PNEFD
Sbjct: 258 IEVPNEFD 265


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 2 LKFPNEFD 9
L F NEFD
Sbjct: 514 LSFDNEFD 521


>sp|RS17E_PYRFU|SMALL ribosomal subunit protein eS17|Pyrococcus furiosus (strain ATCC

Query: 3 KFPNEF 8
K+PNEF
Sbjct: 19 KYPNEF 24


>sp|RS17E_METHJ|SMALL ribosomal subunit protein eS17|Methanospirillum hungatei JF-1

Query: 3 KFPNEFDE 10
KF N+FDE
Sbjct: 22 KFTNDFDE 29


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 LKFPNEFD 9
++ PNEFD
Sbjct: 261 IEVPNEFD 268


>sp|RL10_IGNH4|LARGE ribosomal subunit protein uL10|Ignicoccus hospitalis (strain

Query: 1 GLKFPNEFDE 10
G++ P E DE
Sbjct: 80 GIEMPKEMDE 89


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 2 LKFPNEFDE 10
++ PN FDE
Sbjct: 267 IEMPNYFDE 275


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GLKFPNEF 8
GL+ P+EF
Sbjct: 399 GLELPDEF 406


>sp|DNAG_METAR|DNA primase DnaG|Methanocella arvoryzae (strain DSM 22066

Query: 5 PNEFDE 10
P+EFDE
Sbjct: 390 PSEFDE 395


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 2 LKFPNEFDE 10
++ PN FDE
Sbjct: 266 IEMPNYFDE 274


>sp|GUAAA_METTH|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothermobacter

Query: 3 KFPNEFD 9
K P+EFD
Sbjct: 132 KLPDEFD 138


>sp|Y1344_THEGJ|UPF0212 protein TGAM_1344|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GLKFPNEFD 9
GL+ P+EF+
Sbjct: 120 GLEVPDEFE 128


>sp|RS17E_PYRAB|SMALL ribosomal subunit protein eS17|Pyrococcus abyssi (strain GE5 /

Query: 3 KFPNEF 8
K+PNEF
Sbjct: 19 KYPNEF 24


>sp|RS17E_PYRHO|SMALL ribosomal subunit protein eS17|Pyrococcus horikoshii (strain ATCC

Query: 3 KFPNEF 8
K+PNEF
Sbjct: 19 KYPNEF 24


>sp|T2M1_METJA|TYPE II restriction enzyme MjaI|Methanocaldococcus jannaschii (strain

Query: 3 KFPNEFDE 10
K+PN DE
Sbjct: 85 KYPNAIDE 92


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LKFPNEFD 9
LK+PNE D
Sbjct: 281 LKYPNEGD 288


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKFPNEFDE 10
L+ PN FDE
Sbjct: 74 LQAPNVFDE 82


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 LKFPNEFDE 10
LKF +EF++
Sbjct: 926 LKFADEFEQ 934


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain ATCC

Query: 1 GLKFPNEFD 9
GLK +EFD
Sbjct: 132 GLKIGDEFD 140


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LKFPNEFDE 10
LKF +EF++
Sbjct: 407 LKFADEFED 415


>sp|Y512_METJA|UNCHARACTERIZED protein MJ0512|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLKFPNEFDE 10
G+K+P E E
Sbjct: 85 GVKYPREIPE 94


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LKFPNEFDE 10
+ PNE DE
Sbjct: 454 FEIPNEIDE 462


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 2 LKFPNEF 8
L+FP EF
Sbjct: 139 LRFPKEF 145




417|Sequence|2081|2090|NEFDELEIQG

>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EFDELEIQG 10
EFDE EI+G
Sbjct: 316 EFDEPEIEG 324


>sp|RS12_METHJ|SMALL ribosomal subunit protein uS12|Methanospirillum hungatei JF-1

Query: 1 NEFDELEIQG 10
+E DE+EI+G
Sbjct: 93 DEHDEVEIEG 102


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NEFDELEIQ 9
NE+DEL IQ
Sbjct: 314 NEWDELPIQ 322


>sp|RS12_METB6|SMALL ribosomal subunit protein uS12|Methanoregula boonei (strain DSM

Query: 1 NEFDELEIQG 10
+E DE+EI+G
Sbjct: 93 DEHDEVEIEG 102


>sp|RS12_METMJ|SMALL ribosomal subunit protein uS12|Methanoculleus marisnigri (strain

Query: 1 NEFDELEIQG 10
+E DE+EI+G
Sbjct: 93 DEHDEVEIEG 102


>sp|RS12_THEPD|SMALL ribosomal subunit protein uS12|Thermofilum pendens (strain DSM 2475

Query: 1 NEFDELEIQG 10
NE DE+ I+G
Sbjct: 98 NEHDEVVIEG 107


>sp|RL2_METJA|LARGE ribosomal subunit protein uL2|Methanocaldococcus jannaschii

Query: 3 FDELEIQG 10
FDELE +G
Sbjct: 33 FDELEKKG 40


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 2 EFDELEIQG 10
EFD++EI G
Sbjct: 337 EFDDIEIYG 345


>sp|Y1281_ARCFU|UNCHARACTERIZED protein AF_1281|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NEFDELEI 8
NEF++LE+
Sbjct: 9 NEFEDLEL 16




418|Sequence|2086|2095|LEIQGKLPDP

>sp|TRPB2_METTM|TRYPTOPHAN synthase beta chain 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 LEIQGKLPD 9
LEI+G+LPD
Sbjct: 213 LEIEGELPD 221


>sp|GCH1L_HALSA|GTP cyclohydrolase 1 type 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 IQGKLPDP 10
+QG+LPDP
Sbjct: 134 LQGQLPDP 141


>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 1 LEIQGKLPD 9
LE++G+LPD
Sbjct: 215 LEVEGELPD 223


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 4 QGKLPDP 10
+GKLPDP
Sbjct: 194 EGKLPDP 200


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 3 IQGKLPDP 10
I+G++PDP
Sbjct: 238 IKGRIPDP 245


>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LEIQGKLPD 9
LE +G+LPD
Sbjct: 216 LEKEGRLPD 224


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 4 QGKLPDP 10
+G+LPDP
Sbjct: 195 EGELPDP 201


>sp|TRPB_META3|TRYPTOPHAN synthase beta chain|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LEIQGKLPDP 10
LE +G+LPD
Sbjct: 214 LEAEGRLPDS 223


>sp|TRPB1_PYRFU|TRYPTOPHAN synthase beta chain 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LEIQGKLPD 9
LE +G+LPD
Sbjct: 212 LEAEGQLPD 220


>sp|RL1_NANEQ|LARGE ribosomal subunit protein uL1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LEIQGKLPDP 10
L I+GK+P+P
Sbjct: 116 LGIRGKMPNP 125


>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LEIQGKLPD 9
LE +G+LPD
Sbjct: 228 LEKEGRLPD 236


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 1 LEIQGKLPD 9
E++GKLP+
Sbjct: 162 FEVEGKLPE 170


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 LEIQGKLPD 9
E++GKLP+
Sbjct: 162 FEVEGKLPE 170


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LEIQGKLPD 9
+E +G+LPD
Sbjct: 223 MEKEGRLPD 231


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LEIQGKLPD 9
+E +G+LPD
Sbjct: 223 MEKEGRLPD 231


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 QGKLPDP 10
QGK+P+P
Sbjct: 405 QGKIPEP 411


>sp|EPPA_METJA|PREPILIN peptidase EppA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEIQGKLPD 9
L ++GK+PD
Sbjct: 301 LYMEGKIPD 309


>sp|FEN_METTH|FLAP endonuclease 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LEIQGKLPDP 10
L + GKL DP
Sbjct: 188 LTLSGKLEDP 197


>sp|RL29_SULTO|LARGE ribosomal subunit protein uL29|Sulfurisphaera tokodaii (strain

Query: 2 EIQGKLPD 9
E+QGKL D
Sbjct: 28 ELQGKLND 35


>sp|IXTPA_PYRHO|DITP/XTP pyrophosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IQGKLPDP 10
++GK+P+P
Sbjct: 53 LKGKVPEP 60


>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IQGKLPDP 10
+QGK+ DP
Sbjct: 404 LQGKITDP 411


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 2 EIQGKLPD 9
+I GK+PD
Sbjct: 247 KISGKIPD 254


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 QGKLPDP 10
QG++P+P
Sbjct: 167 QGEMPEP 173


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 1 LEIQGKLPDP 10
+EI+ +PDP
Sbjct: 344 IEIRTHVPDP 353


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 1 LEIQGKLPD 9
LEI G+ PD
Sbjct: 247 LEIAGETPD 255


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LEIQGKLPDP 10
L++ G+L DP
Sbjct: 177 LDVDGQLKDP 186




419|Sequence|2091|2100|KLPDPVKEYG

>sp|RPO1C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter

Query: 2 LPDPVKEY 9
LP+PV EY
Sbjct: 19 LPNPVTEY 26


>sp|AGL14_HALVD|PROBABLE low-salt glycan biosynthesis reductase|Haloferax volcanii (strain

Query: 3 PDPVKEYG 10
P P++EYG
Sbjct: 129 PAPIQEYG 136


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLPDPVKEY 9
K PDPV+E+
Sbjct: 819 KWPDPVEEW 827


>sp|PRIS_METST|DNA primase small subunit PriS|Methanosphaera stadtmanae (strain ATCC

Query: 1 KLPDPVKEYG 10
KLPD EYG
Sbjct: 180 KLPDLSNEYG 189


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PDPVKEYG 10
P P KEYG
Sbjct: 36 PPPRKEYG 43


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 1 KLPDPVKE 8
KLPDP+ +
Sbjct: 103 KLPDPIAD 110


>sp|PYRB_METHJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanospirillum hungatei

Query: 1 KLPDPVKEY 9
+ PDP K Y
Sbjct: 226 RFPDPAKFY 234


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PDPVKEYG 10
PD +K+YG
Sbjct: 448 PDHIKKYG 455


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 KLPDPVKEYG 10
LPD +KE G
Sbjct: 334 NLPDNIKEKG 343


>sp|PYLS_METMA|PYRROLYSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LPDPVK 7
LPDP+K
Sbjct: 316 LPDPIK 321


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 KLPDPVKEYG 10
KL +P+K YG
Sbjct: 1264 KLLEPLKTYG 1273


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KLPDPVKEYG 10
K P+P + YG
Sbjct: 447 KAPEPEQSYG 456


>sp|TPIS_PYRWO|TRIOSEPHOSPHATE isomerase|Pyrococcus woesei

Query: 2 LPDPVKEYG 10
LP+ VKE G
Sbjct: 80 LPEAVKEAG 88


>sp|TPIS_PYRFU|TRIOSEPHOSPHATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LPDPVKEYG 10
LP+ VKE G
Sbjct: 80 LPEAVKEAG 88


>sp|RL22_CALMQ|LARGE ribosomal subunit protein uL22|Caldivirga maquilingensis (strain

Query: 1 KLPDPVKEY 9
K P P+KE+
Sbjct: 69 KAPIPIKEF 77


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 2 LPDPVKEY 9
LPD VK++
Sbjct: 8 LPDEVKQF 15


>sp|GLNA_HALVD|GLUTAMINE synthetase|Haloferax volcanii (strain ATCC 29605

Query: 3 PDPVKE 8
PDPV+E
Sbjct: 377 PDPVRE 382


>sp|TPIS_PYRHO|TRIOSEPHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LPDPVKEYG 10
LP+ VKE G
Sbjct: 79 LPEAVKEAG 87


>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LPDPVK 7
LPDP+K
Sbjct: 305 LPDPIK 310


>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 2 LPDPVK 7
LPDP+K
Sbjct: 340 LPDPIK 345


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KLPDPVKEYG 10
+LP+P+K+ G
Sbjct: 4 ELPEPLKKDG 13


>sp|TPIS_PYRAB|TRIOSEPHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 LPDPVKEYG 10
LP+ VKE G
Sbjct: 79 LPEAVKEAG 87


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 KLPDPVKEY 9
KLPDP K +
Sbjct: 196 KLPDPSKYF 204


>sp|PYLS_METBF|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LPDPVKEY 9
LPDP+K +
Sbjct: 281 LPDPIKIF 288


>sp|PORB_METBF|PYRUVATE synthase subunit PorB|Methanosarcina barkeri (strain Fusaro /

Query: 1 KLPDPVKEY 9
K P PV+EY
Sbjct: 251 KNPRPVEEY 259


>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus torridus

Query: 1 KLPDPVKE 8
KLPD +KE
Sbjct: 125 KLPDYLKE 132


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KLPDPVKE 8
K+PDP +E
Sbjct: 226 KIPDPAEE 233


>sp|Y754_METJA|UNCHARACTERIZED protein MJ0754|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPDPVK 7
+PDPVK
Sbjct: 70 IPDPVK 75


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLPDPVKEY 9
K+PD V EY
Sbjct: 320 KIPDLVDEY 328


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LPDPVK 7
+PDPVK
Sbjct: 558 IPDPVK 563


>sp|Y635_METJA|UNCHARACTERIZED protein MJ0635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DPVKEYG 10
+PV+EYG
Sbjct: 125 NPVEEYG 131




420|Sequence|2096|2105|VKEYGCAPWP

>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 3 EYGCAPW 9
EYGC P+
Sbjct: 14 EYGCDPY 20


>sp|ILVC3_SACS2|PUTATIVE ketol-acid reductoisomerase 3|Saccharolobus solfataricus (strain

Query: 1 VKEYGCAP 8
VKEYG +P
Sbjct: 214 VKEYGVSP 221


>sp|ILVC2_SACS2|PUTATIVE ketol-acid reductoisomerase 2|Saccharolobus solfataricus (strain

Query: 1 VKEYGCAP 8
VKEYG +P
Sbjct: 214 VKEYGVSP 221


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VKEYGCA-PWP 10
VKE GCA P P
Sbjct: 535 VKEIGCALPAP 545


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VKEYGCAPW 9
+KE G APW
Sbjct: 331 LKEEGMAPW 339


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GCAPWP 10
GC+ WP
Sbjct: 999 GCSNWP 1004


>sp|TYW2_METJA|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 2 KEYGC 6
KEYGC
Sbjct: 64 KEYGC 68


>sp|TRPF_METVS|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KEYGC 6
KEYGC
Sbjct: 92 KEYGC 96


>sp|THIM_METLZ|HYDROXYETHYLTHIAZOLE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KEYGC 6
KEYGC
Sbjct: 156 KEYGC 160


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KEYGC 6
KEYGC
Sbjct: 37 KEYGC 41


>sp|GCH3_PYRIL|GTP cyclohydrolase III|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KEYGC 6
KEYGC
Sbjct: 150 KEYGC 154


>sp|ASPD_METBU|L-ASPARTATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KEYGC 6
KEYGC
Sbjct: 112 KEYGC 116


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VKEYGCAP 8
VKEYG P
Sbjct: 724 VKEYGFVP 731


>sp|GGGPS_THESM|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VKEYGCAPWP 10
VK YG P P
Sbjct: 120 VKHYGIEPIP 129


>sp|GGGPS_PYRAB|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VKEYGCAPWP 10
VK YG P P
Sbjct: 121 VKRYGLEPIP 130


>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 1 VKEYGCAPW 9
++E+G PW
Sbjct: 30 LREWGHIPW 38


>sp|GGGPS_THEGJ|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VKEYGCAPWP 10
VK YG P P
Sbjct: 120 VKRYGIEPIP 129


>sp|Y1363_METJA|UNCHARACTERIZED protein MJ1363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKEYGCAPWP 10
VK GCAP P
Sbjct: 124 VKVPGCAPRP 133


>sp|GGGPS_THEKO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VKEYGCAPWP 10
VK YG P P
Sbjct: 120 VKRYGIEPIP 129


>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 2 KEYGCAPW 9
+E+G PW
Sbjct: 31 REWGFIPW 38


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 2 KEYGCAPW 9
+E+G PW
Sbjct: 31 REWGYIPW 38


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 2 KEYGCAPW 9
+E+G PW
Sbjct: 31 REWGYIPW 38


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 3 EYGCAP 8
+YGC P
Sbjct: 20 DYGCPP 25


>sp|FRHB_METJA|COENZYME F420 hydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 VKEYGC 6
V+EYGC
Sbjct: 94 VREYGC 99


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 4 YGCAP 8
YGCAP
Sbjct: 27 YGCAP 31


>sp|Y1571_AERPE|UNCHARACTERIZED protein APE_1571.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 KEYGCAPWP 10
+EYG WP
Sbjct: 456 EEYGGKQWP 464


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii

Query: 3 EYGCAPW 9
+YGC P+
Sbjct: 29 DYGCNPY 35


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 5 GCAPWP 10
GC+ WP
Sbjct: 632 GCSNWP 637


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 2 KEYGCAP 8
KEY C P
Sbjct: 266 KEYPCCP 272


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GCAPWP 10
GC+ WP
Sbjct: 627 GCSNWP 632


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 VKEYGCA 7
++ YGCA
Sbjct: 6 IENYGCA 12


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 VKEYGCA 7
++ YGCA
Sbjct: 6 IENYGCA 12




421|Sequence|2101|2110|CAPWPMVEKL

>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 3 PWPMVEK 9
PWP++EK
Sbjct: 50 PWPIIEK 56


>sp|IF2P_PYRCJ|PROBABLE translation initiation factor IF-2|Pyrobaculum calidifontis

Query: 3 PWPMVEKL 10
PWP VEK
Sbjct: 50 PWPAVEKF 57


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PWPMVEKL 10
P+PMVEK+
Sbjct: 304 PYPMVEKV 311


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PWPMVEKL 10
P+PMVEK+
Sbjct: 305 PYPMVEKV 312


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PWPMVEKL 10
P+PMVEK+
Sbjct: 305 PYPMVEKV 312


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PWPMVEKL 10
P+PMVEK+
Sbjct: 305 PYPMVEKV 312


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PWPMVEKL 10
P+PMVEK+
Sbjct: 305 PYPMVEKV 312


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PWPMVEKL 10
P+PMVEK+
Sbjct: 305 PYPMVEKV 312


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 PWPMVEKL 10
P+PMVEK+
Sbjct: 305 PYPMVEKV 312


>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 APWPMVEKL 10
+PWP VE+L
Sbjct: 270 SPWPEVERL 278


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 3 PWPMVEK 9
P+P+VEK
Sbjct: 301 PYPLVEK 307


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WPMVE 8
WPMVE
Sbjct: 568 WPMVE 572


>sp|MTHZ_METTF|TYPE II methyltransferase M.MthZI|Methanothermobacter

Query: 3 PWPMVE 8
P+PMVE
Sbjct: 31 PYPMVE 36


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 3 PWPMVEK 9
PW +VEK
Sbjct: 145 PWSVVEK 151


>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PWPMV 7
PWP++
Sbjct: 132 PWPLI 136


>sp|SELD_METJA|SELENIDE, water dikinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PWPMV 7
PWP++
Sbjct: 146 PWPLI 150


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 3 PWPMVEKL 10
PW VEK
Sbjct: 49 PWSAVEKF 56


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum

Query: 3 PWPMVEKL 10
PW VEK
Sbjct: 49 PWQAVEKF 56


>sp|Y281_PYRHO|UPF0113 protein PH0281|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 WPMVEKL 10
W +VEKL
Sbjct: 59 WKLVEKL 65


>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum

Query: 3 PWPMVEK 9
PW VEK
Sbjct: 48 PWQAVEK 54


>sp|RL15E_DESA1|LARGE ribosomal subunit protein eL15|Desulfurococcus amylolyticus (strain

Query: 3 PWPMVEKL 10
PW + EKL
Sbjct: 209 PWQIAEKL 216




422|Sequence|2106|2115|MVEKLIKQCL

>sp|MFNB_METMA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MVEKLIKQC 9
+VEKL+ +C
Sbjct: 224 LVEKLVAEC 232


>sp|MFNB_METBF|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 MVEKLIKQC 9
+VEKL+ +C
Sbjct: 224 LVEKLVAEC 232


>sp|MFNB_METAC|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MVEKLIKQC 9
+VEKL+ +C
Sbjct: 224 LVEKLVAEC 232


>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MVEKLIKQCL 10
MV+K +++CL
Sbjct: 60 MVDKEVEECL 69


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 4 KLIKQCL 10
+LIKQC+
Sbjct: 312 RLIKQCI 318


>sp|Y1361_METLZ|UPF0147 protein Mlab_1361|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 EKLIKQCL 10
E +IKQC+
Sbjct: 21 EDMIKQCI 28


>sp|ACKA_METTE|ACETATE kinase|Methanosarcina thermophila

Query: 2 VEKLIKQCL 10
VEK IK C
Sbjct: 109 VEKAIKDCF 117


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 MVEKLIKQCL 10
M+E++I CL
Sbjct: 461 MLEEVINDCL 470


>sp|MFNB_META3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 MVEKLIKQC 9
+VE+L+K C
Sbjct: 226 LVEELVKLC 234


>sp|Y618_METJA|UPF0235 protein MJ0618|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MVEKLIKQC 9
M+EK+IK+
Sbjct: 1 MIEKIIKES 9




423|Sequence|2111|2120|IKQCLKENPQ

>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 1 IKQCLKENPQ 10
IK+ LK NP+
Sbjct: 376 IKELLKANPK 385


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 1 IKQCLKENPQ 10
+KQ ++ENP+
Sbjct: 399 VKQAIEENPK 408


>sp|IDI2_THEON|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus onnurineus (strain NA1)

Query: 1 IKQCLKENPQ 10
I+ CLK N Q
Sbjct: 18 IEHCLKRNVQ 27


>sp|IDI2_THEKO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IKQCLKENPQ 10
I+ CLK N Q
Sbjct: 18 IEHCLKRNVQ 27


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IKQCLKENP 9
+ Q LKENP
Sbjct: 199 VNQRLKENP 207


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 2 KQCLKENPQ 10
K+C+KE P+
Sbjct: 484 KKCVKECPE 492


>sp|ASPD_METM6|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 1 IKQCLKENP 9
IK C++ NP
Sbjct: 229 IKTCVENNP 237


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IKQCLKENPQ 10
+K+ L+ENP+
Sbjct: 239 LKRILRENPE 248


>sp|ASPD_METM7|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 IKQCLKENP 9
IK C++ NP
Sbjct: 229 IKTCVENNP 237


>sp|ASPD_METM5|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 IKQCLKENP 9
IK C++ NP
Sbjct: 229 IKTCVENNP 237


>sp|ASPD_METMP|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IKQCLKENP 9
IK C++ NP
Sbjct: 229 IKTCVENNP 237


>sp|Y642_METJA|UNCHARACTERIZED protein MJ0642|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKQCLKENPQ 10
IK+ LK NP
Sbjct: 267 IKELLKNNPH 276


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IKQCLKENPQ 10
IK+ +K NP+
Sbjct: 376 IKELIKHNPK 385


>sp|AMT2_ARCFU|AMMONIUM transporter Amt2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QCLKENPQ 10
+ LKENP+
Sbjct: 27 ETLKENPE 34


>sp|RL18E_METB6|LARGE ribosomal subunit protein eL18|Methanoregula boonei (strain DSM

Query: 1 IKQCLKENPQ 10
I+Q LK+NP+
Sbjct: 104 IEQLLKDNPK 113


>sp|SYH_NANEQ|HISTIDINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IKQCLKENPQ 10
I + LKENP+
Sbjct: 208 IIELLKENPE 217


>sp|HIS6_METS3|IMIDAZOLE glycerol phosphate synthase subunit|Methanobrevibacter smithii

Query: 1 IKQCLKEN 8
+KQ LKEN
Sbjct: 261 VKQYLKEN 268


>sp|ASPD_METVS|L-ASPARTATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IKQCLKENP 9
IK C++ NP
Sbjct: 229 IKTCVENNP 237


>sp|MTRA_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 1 IKQCLKENP 9
IK+CL ++P
Sbjct: 149 IKECLSKDP 157


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IKQCLKENPQ 10
+++ L+ENP+
Sbjct: 233 LRKILRENPE 242


>sp|ILVC_METM6|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 1 IKQCLKE 7
IK CLKE
Sbjct: 93 IKPCLKE 99


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKQCLKEN 8
IKQ +KEN
Sbjct: 313 IKQAIKEN 320


>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IKQCLKENP 9
IK+ +K NP
Sbjct: 376 IKELIKRNP 384


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IKQCLKE 7
IKQC+K+
Sbjct: 314 IKQCIKD 320


>sp|HIS2_METJA|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKQCLKENPQ 10
IKQ +KE P+
Sbjct: 10 IKQRIKEKPE 19


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 2 KQCLKEN 8
K+C++EN
Sbjct: 65 KECIEEN 71


>sp|RL18E_ARCFU|LARGE ribosomal subunit protein eL18|Archaeoglobus fulgidus (strain ATCC

Query: 1 IKQCLKENPQ 10
I++ LKENP+
Sbjct: 100 IEELLKENPK 109


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 IKQCLKENPQ 10
+KQ L+E P+
Sbjct: 155 VKQILEEKPR 164


>sp|Y491_METJA|UNCHARACTERIZED protein MJ0491|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKQCLKENP 9
I + LKENP
Sbjct: 100 INEILKENP 108


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 IKQCLKENPQ 10
I C+ ENP+
Sbjct: 203 ILPCINENPR 212




424|Sequence|2116|2125|KENPQERPTS

>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ENPQERP 8
ENP+ERP
Sbjct: 132 ENPEERP 138


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 1 KENPQERPTS 10
KE P+ER T+
Sbjct: 18 KEEPKERKTT 27


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NPQERPT 9
NPQE PT
Sbjct: 840 NPQEIPT 846


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KENPQER 7
K NP+ER
Sbjct: 346 KHNPEER 352


>sp|Y1384_THEVO|PROTEIN TV1384|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NPQERPTS 10
NP+ERP +
Sbjct: 118 NPEERPKA 125


>sp|COFD_NATPD|2-PHOSPHO-L-LACTATE transferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ENPQERPT 9
E P ERPT
Sbjct: 295 ETPLERPT 302


>sp|R15PI_METJA|RIBOSE 1,5-bisphosphate isomerase|Methanocaldococcus jannaschii (strain

Query: 1 KENPQER 7
+ENP+ER
Sbjct: 86 EENPKER 92


>sp|Y687_METJA|UNCHARACTERIZED protein MJ0687|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KENPQER 7
KENP+E+
Sbjct: 150 KENPEEK 156




425|Sequence|2121|2130|ERPTSAQVFD

>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 3 PTSAQVFD 10
PTS ++FD
Sbjct: 225 PTSVEIFD 232


>sp|ENGB_METMA|PROBABLE GTP-binding protein EngB|Methanosarcina mazei (strain ATCC

Query: 2 RPTSAQVFD 10
RPT AQV D
Sbjct: 49 RPTHAQVSD 57


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 ERPTSAQVF 9
ERPT ++F
Sbjct: 102 ERPTREEIF 110




426|Sequence|2126|2135|AQVFDILNSA

>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 QVFDILNSA 10
+VFD+LNS+
Sbjct: 201 KVFDVLNSS 209


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 QVFDILNSA 10
+VFD+LNS+
Sbjct: 201 KVFDVLNSS 209


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 2 QVFDILNSA 10
+VFD+LNS+
Sbjct: 201 KVFDVLNSS 209


>sp|APGM_SACS2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus solfataricus (strain ATCC

Query: 2 QVFDILNSA 10
+VFD+LNS+
Sbjct: 201 KVFDVLNSS 209


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 QVFDILNSA 10
+VFD+LNS+
Sbjct: 201 KVFDVLNSS 209


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 QVFDILNSA 10
+VFD+LNS+
Sbjct: 201 KVFDVLNSS 209


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 QVFDILNSA 10
+VFD+LNS+
Sbjct: 201 KVFDVLNSS 209


>sp|Y1598_METJA|UPF0284 protein MJ1598|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AQVFDILNS 9
+ VFD+LN+
Sbjct: 203 SSVFDVLNA 211




427|Sequence|2131|2140|ILNSAELVCL

>sp|TF2B5_HALSA|TRANSCRIPTION initiation factor IIB 5|Halobacterium salinarum (strain ATCC

Query: 3 NSAELVC 9
NSAE VC
Sbjct: 33 NSAETVC 39




428|Sequence|2136|2145|ELVCLTRRIL

>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 ELVCLTRRIL 10
E +C+ +RIL
Sbjct: 774 ETICMIKRIL 783




429|Sequence|2141|2150|TRRILLPKNV

>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 1 TRRILLPKNV 10
T RI++P NV
Sbjct: 146 THRIMIPPNV 155


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 2 RRILLPK 8
RRILLP+
Sbjct: 140 RRILLPE 146


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TRRILLPKN 9
T R+LLPK+
Sbjct: 449 TGRVLLPKS 457


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 RRILLPKNV 10
RRILL +NV
Sbjct: 587 RRILLIRNV 595


>sp|RL3_METMJ|LARGE ribosomal subunit protein uL3|Methanoculleus marisnigri (strain

Query: 1 TRRILLPKN 9
+RRI +PKN
Sbjct: 111 SRRINVPKN 119


>sp|UPPS_PYRFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus furiosus

Query: 2 RRILLPKNV 10
R+ LLPKNV
Sbjct: 131 RKELLPKNV 139


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ILLPKNV 10
++LPKNV
Sbjct: 39 VVLPKNV 45


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 RILLPKNV 10
RIL+P NV
Sbjct: 149 RILIPPNV 156


>sp|IF6_SULTO|TRANSLATION initiation factor 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 ILLPKNV 10
ILLP+NV
Sbjct: 69 ILLPRNV 75


>sp|REG2_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH0061|Pyrococcus horikoshii

Query: 3 RILLPKNV 10
R+LLPK++
Sbjct: 107 RLLLPKDI 114


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 2 RRILLPKNV 10
++ILLP N+
Sbjct: 164 KKILLPSNM 172


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RRILLPKNV 10
RRI++PK V
Sbjct: 300 RRIIIPKVV 308




430|Sequence|2146|2155|LPKNVIVECM

>sp|CBID_PICTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 3 KNVIVECM 10
KN+I+ CM
Sbjct: 242 KNIIIACM 249


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LPKNVIVE 8
+P+N++VE
Sbjct: 1 MPRNIVVE 8


>sp|G1PDH_THEPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermofilum pendens (strain DSM 2475

Query: 1 LPKNVIVE 8
LPK V+VE
Sbjct: 5 LPKRVVVE 12


>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LPKNVIVE 8
+P+N++VE
Sbjct: 1 MPRNIVVE 8


>sp|Y224_METKA|UPF0284 protein MK0224|Methanopyrus kandleri (strain AV19 /

Query: 2 PKNVIVEC 9
PK+V+ EC
Sbjct: 360 PKDVLREC 367


>sp|RL6_SACS2|LARGE ribosomal subunit protein uL6|Saccharolobus solfataricus (strain

Query: 1 LPKNVIVE 8
+PKNV+V+
Sbjct: 12 IPKNVVVD 19


>sp|G1PDH_HALSA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC

Query: 1 LPKNVIV 7
LP+NV+V
Sbjct: 10 LPRNVVV 16


>sp|G1PDH_HALS3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC

Query: 1 LPKNVIV 7
LP+NV+V
Sbjct: 10 LPRNVVV 16


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 1 LPKNVIV 7
LP+NV+V
Sbjct: 10 LPRNVVV 16


>sp|TRUA_NANEQ|TRNA pseudouridine synthase A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LPKNVIV 7
LPKNVI+
Sbjct: 46 LPKNVIL 52


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain

Query: 1 LPKNVIVEC 9
LPK ++ C
Sbjct: 80 LPKGTVINC 88


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PKNVIVE 8
PKNVI++
Sbjct: 503 PKNVIIK 509


>sp|Y1498_SULAC|PARB-LIKE protein Saci_1498|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LPKNVIVE 8
+PKNV+++
Sbjct: 161 VPKNVVID 168


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 3 KNVIVEC 9
KN IV+C
Sbjct: 224 KNAIVQC 230




431|Sequence|2151|2160|IVECMVATHH

>sp|TRPC_METJA|INDOLE-3-GLYCEROL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VECMVATH 9
+EC+V TH
Sbjct: 169 LECLVETH 176


>sp|Y753_METJA|UNCHARACTERIZED protein MJ0753|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IVECMV 6
IVECM+
Sbjct: 151 IVECMI 156


>sp|MFNA_META3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus aeolicus (strain

Query: 3 ECMVATHH 10
ECM TH+
Sbjct: 306 ECMDKTHY 313


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IVECMVATHH 10
+++C V+ HH
Sbjct: 305 LIKCGVSFHH 314


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 2 VECMVATH 9
++C+VA H
Sbjct: 62 IDCVVAVH 69


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IVECMVATH 9
IVECM TH
Sbjct: 194 IVECMHRTH 202


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 IVECMVATH 9
IVECM TH
Sbjct: 194 IVECMHRTH 202


>sp|TRMY_ARCFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Archaeoglobus fulgidus

Query: 3 ECMVATHH 10
+C+V HH
Sbjct: 274 QCVVIAHH 281




432|Sequence|2156|2165|VATHHNSRNA

>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 1 VATHHNSRNA 10
+ATHH R++
Sbjct: 529 IATHHAVRSS 538


>sp|MER_METJA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VATHHNSRN 9
+ H+N+RN
Sbjct: 33 ITDHYNNRN 41


>sp|MER_ARCFU|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VATHHNSRN 9
+ H+N+RN
Sbjct: 33 ITDHYNNRN 41


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VATHHNS 7
V THHN+
Sbjct: 475 VITHHNA 481




433|Sequence|2161|2170|NSRNASIWLG

>sp|FLPA_METTP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanothrix thermoacetophila

Query: 2 SRNASIWL 9
SRNASI+L
Sbjct: 147 SRNASIYL 154


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 2 SRNASIWLG 10
+RN +IW G
Sbjct: 458 ARNLNIWTG 466


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 SRNASIWLG 10
+R ASI+LG
Sbjct: 293 AREASIYLG 301


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SRNASIWL 9
SRN +IW+
Sbjct: 348 SRNWAIWI 355


>sp|HAH4_HALMT|HALOCIN-H4 mediterranei (strain ATCC 33500

Query: 2 SRNASIWLG 10
SRN S W+G
Sbjct: 149 SRNDSDWVG 157


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 NSRNASIWLG 10
N+R + WLG
Sbjct: 183 NAREMADWLG 192


>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 NSRNASIWLG 10
+SRNA W+
Sbjct: 24 SSRNADHWIA 33


>sp|PSTB_METMP|PHOSPHATE import ATP-binding protein PstB|Methanococcus maripaludis (strain

Query: 1 NSRNASIWLG 10
NS++ + W G
Sbjct: 6 NSKDVNFWYG 15




434|Sequence|2166|2175|SIWLGCGHTD

>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 IWLGCGHTD 10
IW GHTD
Sbjct: 781 IWEAIGHTD 789


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 CGHTD 10
CGHTD
Sbjct: 383 CGHTD 387


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 6 CGHTD 10
CGHTD
Sbjct: 305 CGHTD 309


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 CGHTD 10
CGHTD
Sbjct: 305 CGHTD 309


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 WLGCGHTD 10
WLG G TD
Sbjct: 162 WLGIGITD 169


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 WLGCGHTD 10
WLG G TD
Sbjct: 161 WLGLGITD 168


>sp|TH11_HALSA|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 2 IWLGCG 7
+WL CG
Sbjct: 84 VWLSCG 89


>sp|TH11_HALS3|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 2 IWLGCG 7
+WL CG
Sbjct: 84 VWLSCG 89


>sp|LIPA_PICTO|LIPOYL synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 SIWLGCGHTD 10
SI LG G TD
Sbjct: 196 SIMLGLGETD 205


>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IWLGCGHT 9
+W+GC T
Sbjct: 266 VWIGCDGT 273


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IWLGCGHTD 10
IW GH D
Sbjct: 782 IWEAMGHKD 790


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 WLGC 6
WLGC
Sbjct: 168 WLGC 171


>sp|Y1374_METJA|UNCHARACTERIZED protein MJ1374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IWLGCG 7
I+LGCG
Sbjct: 6 IFLGCG 11


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IWLGCGHTD 10
IW GH D
Sbjct: 782 IWEAMGHED 790


>sp|Y606_METJA|UNCHARACTERIZED protein MJ0606|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WLGCG 7
WLGCG
Sbjct: 67 WLGCG 71


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 1 SIWLGC 6
+IW GC
Sbjct: 462 NIWTGC 467


>sp|PYRB_PYRCJ|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum calidifontis

Query: 1 SIWLGCGHTD 10
+IW GH D
Sbjct: 142 TIWREFGHVD 151


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SIWLGCGHTD 10
S+ CG+TD
Sbjct: 17 SLLKACGYTD 26


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SIWLGCGHTD 10
S+ CG+TD
Sbjct: 17 SLLKACGYTD 26


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 4 LGCGH 8
+GCGH
Sbjct: 27 VGCGH 31


>sp|HIS4_METLZ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocorpusculum labreanum

Query: 3 WLGCG 7
WL CG
Sbjct: 91 WLNCG 95


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 IWLGCGHTD 10
IW+ G TD
Sbjct: 494 IWMMLGETD 502




435|Sequence|2171|2180|CGHTDRGQLS

>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CGHTDRGQL 9
C HTDR Q+
Sbjct: 233 CDHTDRPQI 241


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 2 GHTDRGQL 9
GH+DR QL
Sbjct: 577 GHSDRKQL 584


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GHTDRGQL 9
GH+DR QL
Sbjct: 576 GHSDRKQL 583


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 2 GHTDRGQL 9
GH+DR QL
Sbjct: 578 GHSDRRQL 585


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GHTDRGQL 9
GH+DR QL
Sbjct: 579 GHSDRRQL 586


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 CGHTD 5
CGHTD
Sbjct: 305 CGHTD 309


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CGHTD 5
CGHTD
Sbjct: 305 CGHTD 309


>sp|HEM1_AERPE|GLUTAMYL-TRNA reductase|Aeropyrum pernix (strain ATCC 700893

Query: 4 TDRGQLS 10
+DRGQLS
Sbjct: 383 SDRGQLS 389


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 2 GHTDRGQLS 10
GH+ R Q+S
Sbjct: 578 GHSSRSQIS 586


>sp|COBQ_METMJ|PROBABLE cobyric acid synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GHTDRGQLS 10
G T+RG LS
Sbjct: 397 GETERGDLS 405


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 HTDRGQL 9
H++RGQL
Sbjct: 268 HSERGQL 274


>sp|RKD3_PYRCJ|ARCADIN-3 calidifontis (strain DSM 21063

Query: 2 GHTDRGQLS 10
G+TD G+L+
Sbjct: 13 GNTDEGKLA 21


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 13 GHVDHGKTS 21


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 24 GHVDHGKTS 32


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 12 GHVDHGKTS 20


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 12 GHVDHGKTS 20


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 16 GHVDHGKTS 24


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 12 GHVDHGKTS 20


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 12 GHVDHGKTS 20


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 12 GHVDHGKTS 20


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 14 GHVDHGKTS 22


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 27 GHVDHGKTS 35


>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 16 GHVDHGKTS 24


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 15 GHVDHGKTS 23


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 20 GHVDHGKTS 28


>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 12 GHVDHGKTS 20


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 22 GHVDHGKTS 30


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 22 GHVDHGKTS 30


>sp|IF2P_HALMA|PROBABLE translation initiation factor IF-2|Haloarcula marismortui (strain

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 23 GHVDHGKTS 31


>sp|IF2P_HALLT|PROBABLE translation initiation factor IF-2|Halorubrum lacusprofundi

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 19 GHVDHGKTS 27


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 18 GHVDHGKTS 26


>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 15 GHVDHGKTS 23


>sp|IF2G_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 15 GHVDHGKTS 23


>sp|IF2G_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 15 GHVDHGKTS 23


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 HTDRGQLS 10
+T+RGQ+S
Sbjct: 703 NTERGQIS 710


>sp|IF2G_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 15 GHVDHGKTS 23


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 15 GHVDHGKTS 23


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 2 GHTDRGQLS 10
GH D G+ S
Sbjct: 15 GHVDHGKTS 23


>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 3 HTDRGQL 9
H+D GQL
Sbjct: 276 HSDNGQL 282


>sp|G3P_HALSA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GHTDRGQLS 10
G TDRG ++
Sbjct: 173 GQTDRGPIN 181


>sp|G3P_HALS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GHTDRGQLS 10
G TDRG ++
Sbjct: 173 GQTDRGPIN 181




436|Sequence|2176|2185|RGQLSFLDLN

>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 QLSFLDL 9
QLSFLDL
Sbjct: 180 QLSFLDL 186


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RGQLSFLDLN 10
R ++SF+DLN
Sbjct: 26 RDKISFVDLN 35


>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RGQLSFLDL 9
RG+L +LDL
Sbjct: 359 RGKLRYLDL 367


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RGQLSFLDLN 10
R QLSF +LN
Sbjct: 42 RDQLSFNNLN 51


>sp|NCPP_PYRNV|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum neutrophilum (strain

Query: 1 RGQLSFLDLN 10
RG+++ LDLN
Sbjct: 147 RGRVTRLDLN 156


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 1 RGQLSFLD 8
RGQL F D
Sbjct: 263 RGQLRFYD 270


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GQLSFLDLN 10
G+L+FL LN
Sbjct: 573 GRLTFLPLN 581


>sp|Y452_PYRAB|UNCHARACTERIZED lipoprotein PYRAB04520|Pyrococcus abyssi (strain GE5 /

Query: 1 RGQLSFLDL 9
RG LSF D+
Sbjct: 47 RGDLSFNDM 55


>sp|Y1714_PYRHO|UNCHARACTERIZED lipoprotein PH1714|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RGQLSFLDL 9
RG LSF D+
Sbjct: 48 RGDLSFNDM 56


>sp|Y1695_PYRFU|UNCHARACTERIZED lipoprotein PF1695|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RGQLSFLDL 9
RG LSF D+
Sbjct: 44 RGDLSFNDM 52


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GQLSFLDLN 10
GQ+ +LDL+
Sbjct: 277 GQMMYLDLS 285


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RGQLSFLDL 9
RG++ +LDL
Sbjct: 365 RGKIRYLDL 373




437|Sequence|2181|2190|FLDLNTEGYT

>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLDLNTEGYT 10
F+D++TEG T
Sbjct: 106 FVDVDTEGKT 115


>sp|Y441_METJA|PROBABLE membrane transporter protein MJ0441|Methanocaldococcus jannaschii

Query: 1 FLDLNTEGY 9
+L NTEGY
Sbjct: 204 YLTANTEGY 212


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 1 FLDLNTEGY 9
+LDLN +GY
Sbjct: 68 WLDLNDDGY 76


>sp|Y392_METJA|ZINC metalloprotease MJ0392|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FLDLNTEGY 9
F D+N GY
Sbjct: 115 FFDININGY 123


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 3 DLNTEGYT 10
++N EGYT
Sbjct: 59 NINVEGYT 66


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 2 LDLNTEGY 9
L LN EGY
Sbjct: 784 LKLNVEGY 791


>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 2 LDLNTEGY 9
L LN EGY
Sbjct: 226 LKLNVEGY 233


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FLDLNTEGY 9
+LDL+ EG+
Sbjct: 281 YLDLSDEGF 289


>sp|DPM1L_HALVD|DOLICHYL-PHOSPHATE hexose transferase HVO_1613|Haloferax volcanii (strain ATCC 29605

Query: 1 FLDLNTEGY 9
FLDL +GY
Sbjct: 101 FLDLINDGY 109


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 FLDLNTEGY 9
FLDL +GY
Sbjct: 108 FLDLYNKGY 116


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 2 LDLNTEGY 9
L LN EGY
Sbjct: 226 LALNVEGY 233


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 LDLNTEGY 9
L LN EGY
Sbjct: 226 LALNVEGY 233


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 LDLNTEGY 9
L LN EGY
Sbjct: 226 LALNVEGY 233


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 LDLNTEGY 9
L LN EGY
Sbjct: 226 LALNVEGY 233


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 LDLNTEGY 9
L LN EGY
Sbjct: 226 LALNVEGY 233


>sp|Y1548_ARCFU|UNCHARACTERIZED protein AF_1548|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLDLNTEGYT 10
FLD+ G+T
Sbjct: 63 FLDVEKHGFT 72


>sp|TRM56_METMP|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 1 FLDLNTEGYT 10
FLD TEG T
Sbjct: 144 FLDRFTEGKT 153


>sp|TRM56_METM5|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 1 FLDLNTEGYT 10
FLD TEG T
Sbjct: 144 FLDRLTEGKT 153


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LDLNTEGY 9
+D+N +GY
Sbjct: 548 IDVNNDGY 555


>sp|TRM56_METM7|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 1 FLDLNTEGYT 10
FLD TEG T
Sbjct: 144 FLDRLTEGKT 153


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLDLNTEG 8
FLD+ TEG
Sbjct: 511 FLDVLTEG 518


>sp|TRM56_METM6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 1 FLDLNTEGYT 10
FLD TEG T
Sbjct: 144 FLDRLTEGKT 153




438|Sequence|2186|2195|TEGYTSEEVA

>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TEGYTSEEVA 10
T+GYTSEE+A
Sbjct: 40 TKGYTSEEIA 49


>sp|TRPD_PYRAB|ANTHRANILATE phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 TEGYTSEEVA 10
T+GYT+EE+A
Sbjct: 40 TKGYTAEEIA 49


>sp|TRPD_THEKO|ANTHRANILATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 TEGYTSEEVA 10
T+GYT EE+A
Sbjct: 42 TKGYTGEELA 51


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 2 EGYTSEEVA 10
EGYT E+VA
Sbjct: 35 EGYTIEQVA 43


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 TEGYTSEEVA 10
T+G+T+ E+A
Sbjct: 40 TKGFTANEIA 49


>sp|TRPD_METKA|ANTHRANILATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 EGYTSEEV 9
+GYTSEE+
Sbjct: 45 KGYTSEEL 52


>sp|HMD_METTL|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermococcus thermolithotrophicus

Query: 1 TEGYTSEE 8
+EGY SEE
Sbjct: 215 SEGYASEE 222


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TEGYTSEEV 9
TEGYT+ ++
Sbjct: 306 TEGYTASDI 314


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 GYTSEEV 9
GYT EEV
Sbjct: 52 GYTDEEV 58


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 EGYTSEEVA 10
EG T+EEVA
Sbjct: 217 EGKTAEEVA 225


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 EGYTSEEVA 10
EG T+EEVA
Sbjct: 217 EGKTAEEVA 225


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 2 EGYTSEEVA 10
EG+T +E+A
Sbjct: 430 EGFTVDEIA 438


>sp|EF1B_THEKO|ELONGATION factor 1-beta|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EGYTSEEVA 10
EGY+ +EVA
Sbjct: 63 EGYSFDEVA 71


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 EGYTSEEV 9
EGY EEV
Sbjct: 227 EGYADEEV 234


>sp|EF1B_THEON|ELONGATION factor 1-beta|Thermococcus onnurineus (strain NA1)

Query: 2 EGYTSEEVA 10
EGY+ +EVA
Sbjct: 63 EGYSYDEVA 71


>sp|EF1B_PYRHO|ELONGATION factor 1-beta|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EGYTSEEVA 10
EGY+ +EVA
Sbjct: 63 EGYSFDEVA 71


>sp|HMD_METTH|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 EGYTSEE 8
EGY SEE
Sbjct: 218 EGYASEE 224


>sp|HMD_METTF|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus

Query: 2 EGYTSEE 8
EGY SEE
Sbjct: 218 EGYASEE 224


>sp|EF1B_PYRAB|ELONGATION factor 1-beta|Pyrococcus abyssi (strain GE5 /

Query: 2 EGYTSEEVA 10
EGY+ +EVA
Sbjct: 63 EGYSFDEVA 71


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 TEGYTSEEVA 10
T+G T++E+A
Sbjct: 40 TKGVTADEIA 49


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 TEGYTSEEVA 10
T+G T++E+A
Sbjct: 40 TKGVTADEIA 49


>sp|HMD_METJA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EGYTSEE 8
EGY SEE
Sbjct: 216 EGYASEE 222


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TEGYTSEEV 9
EG+TS++V
Sbjct: 118 VEGFTSKDV 126




439|Sequence|2191|2200|SEEVADSRIL

>sp|RL3_HALSA|LARGE ribosomal subunit protein uL3|Halobacterium salinarum (strain ATCC

Query: 1 SEEVADSRIL 10
+EE+AD R++
Sbjct: 132 TEEIADIRVI 141


>sp|RL3_HALS3|LARGE ribosomal subunit protein uL3|Halobacterium salinarum (strain ATCC

Query: 1 SEEVADSRIL 10
+EE+AD R++
Sbjct: 132 TEEIADIRVI 141


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 2 EEVADSRIL 10
EEVAD R L
Sbjct: 182 EEVADQRPL 190


>sp|CMR6_PYRFU|CRISPR system Cmr subunit Cmr6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SEEVADSRIL 10
+EE+AD IL
Sbjct: 245 AEEIADKPIL 254


>sp|IDSA_METTM|SHORT chain isoprenyl diphosphate synthase|Methanothermobacter

Query: 3 EVADSRIL 10
EVAD RI+
Sbjct: 13 EVADKRIM 20




440|Sequence|2196|2205|DSRILCLALV

>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DSRILCLA 8
DSRI CL+
Sbjct: 85 DSRICCLS 92




441|Sequence|2201|2210|CLALVHLPVE

>sp|TRPD_HALLT|ANTHRANILATE phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 3 ALVHLPVE 10
+L H+PVE
Sbjct: 206 SLAHMPVE 213


>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 ALVHLPV 9
AL HLPV
Sbjct: 400 ALTHLPV 406


>sp|KHSE_META3|HOMOSERINE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LALVHLPVE 10
L ++H+PVE
Sbjct: 168 LEIIHIPVE 176


>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LVHLPVE 10
LVH P+E
Sbjct: 9 LVHTPIE 15


>sp|ILVH_ARCFU|PROBABLE acetolactate synthase small subunit|Archaeoglobus fulgidus

Query: 1 CLALVHLPVE 10
CL VH P E
Sbjct: 86 CLIRVHAPPE 95


>sp|ILVH_METTH|PROBABLE acetolactate synthase small subunit|Methanothermobacter

Query: 1 CLALVHLPVE 10
C+ VH P E
Sbjct: 93 CMVKVHAPSE 102


>sp|KHSE_METVS|HOMOSERINE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LALVHLPVE 10
L ++H+PVE
Sbjct: 159 LEVLHIPVE 167




442|Sequence|2206|2215|HLPVEKESWI

>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 1 HLPVEKESW 9
H VEK +W
Sbjct: 58 HFTVEKTNW 66


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 1 HLPVEKESW 9
H VEK +W
Sbjct: 58 HFTVEKTNW 66


>sp|AATE_SACI7|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 LPVEKESWI 10
L VEKE WI
Sbjct: 74 LLVEKEYWI 82


>sp|AATE_SACI6|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LPVEKESWI 10
L VEKE WI
Sbjct: 74 LLVEKEYWI 82


>sp|AATE_SACI4|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LPVEKESWI 10
L VEKE WI
Sbjct: 74 LLVEKEYWI 82


>sp|AATE_SACI3|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain M.16.27)

Query: 2 LPVEKESWI 10
L VEKE WI
Sbjct: 74 LLVEKEYWI 82


>sp|AATE_SACI2|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain L.S.2.15

Query: 2 LPVEKESWI 10
L VEKE WI
Sbjct: 74 LLVEKEYWI 82


>sp|AATE_SACI1|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 LPVEKESWI 10
L VEKE WI
Sbjct: 74 LLVEKEYWI 82


>sp|SUCC_METJA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Methanocaldococcus jannaschii

Query: 2 LPVEKESWI 10
LP+EKE ++
Sbjct: 92 LPIEKEYYV 100


>sp|COXX2_CENSY|PROTOHEME IX farnesyltransferase 2|Cenarchaeum symbiosum (strain A)

Query: 3 PVEKESWI 10
P EK +W+
Sbjct: 279 PTEKAAWV 286


>sp|AATE_SACS2|A-TYPE ATP synthase subunit E|Saccharolobus solfataricus (strain ATCC

Query: 2 LPVEKESWI 10
L VEKE WI
Sbjct: 74 LLVEKEYWI 82


>sp|THI4_PYRAR|THIAMINE thiazole synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 HLPVEKESW 9
LP EK +W
Sbjct: 187 QLPGEKSAW 195


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain

Query: 1 HLPVEKESW 9
H +EK +W
Sbjct: 58 HFTLEKRNW 66


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii

Query: 1 HLPVEKESW 9
H +EK +W
Sbjct: 57 HFTLEKRNW 65


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HLPVEKESWI 10
H +EK SWI
Sbjct: 489 HAVLEKGSWI 498


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PVEKESWI 10
P+EK+ W+
Sbjct: 509 PLEKQYWM 516


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 VEKESW 9
VEKE W
Sbjct: 979 VEKEEW 984


>sp|Y657_ARCFU|UNCHARACTERIZED protein AF_0657|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EKESWI 10
EK+SWI
Sbjct: 40 EKKSWI 45


>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus (strain

Query: 1 HLPVEKESWI 10
+LP EK+SWI
Sbjct: 439 YLP-EKKSWI 447


>sp|RS8_METKA|SMALL ribosomal subunit protein uS8|Methanopyrus kandleri (strain AV19

Query: 3 PVEKESW 9
PV+K+ W
Sbjct: 80 PVKKDEW 86


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LPVEKESW 9
L +EKE W
Sbjct: 211 LDLEKEKW 218




443|Sequence|2211|2220|KESWIVSGTQ

>sp|GAD_PICTO|D-GLUCONATE/D-GALACTONATE dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 3 SWIVSGT 9
SW+VSGT
Sbjct: 383 SWVVSGT 389


>sp|LIVH_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 3 SWIVSG 8
SWI+SG
Sbjct: 203 SWILSG 208


>sp|Y748_METKA|UPF0212 protein MK0748|Methanopyrus kandleri (strain AV19 /

Query: 4 WIVSGT 9
WIV+GT
Sbjct: 68 WIVAGT 73


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 KESWIVS 7
+ESW+VS
Sbjct: 359 RESWMVS 365


>sp|OFOA1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Sulfurisphaera tokodaii (strain

Query: 3 SWIVSGTQ 10
SW++ G Q
Sbjct: 4 SWVIGGAQ 11


>sp|OFOA_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Sulfolobus sp

Query: 3 SWIVSGTQ 10
SW++ G Q
Sbjct: 4 SWVIGGAQ 11


>sp|ACDD2_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 KESWIVS 7
+ESW+VS
Sbjct: 358 RESWMVS 364


>sp|ACDD1_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 KESWIVS 7
+ESW+VS
Sbjct: 358 RESWMVS 364


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 SWIVSGTQ 10
SWI GTQ
Sbjct: 132 SWIYIGTQ 139


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SWIVSGTQ 10
SWI GTQ
Sbjct: 132 SWIYIGTQ 139


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus

Query: 3 SWIVSGTQ 10
SW++ G Q
Sbjct: 4 SWMIGGAQ 11




444|Sequence|2216|2225|VSGTQSGTLL

>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SGTQSGT 8
+GTQSGT
Sbjct: 303 AGTQSGT 309


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 2 SGTQSGTLL 10
SGTQSG +
Sbjct: 313 SGTQSGEVF 321


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 1 VSGTQSGT 8
++GT SGT
Sbjct: 295 IAGTSSGT 302




445|Sequence|2221|2230|SGTLLVINTE

>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 2 GTLLVINTE 10
G LLV+NTE
Sbjct: 383 GWLLVLNTE 391


>sp|Y1395_METJA|UNCHARACTERIZED protein MJ1395|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TLLVINTE 10
TLL+IN E
Sbjct: 87 TLLIINAE 94


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GTLLVINTE 10
GTL VI+TE
Sbjct: 13 GTLEVIDTE 21


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 1 SGTLLVINTE 10
+G++L+I+TE
Sbjct: 317 NGSILIISTE 326


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain C5

Query: 1 SGTLLVINTE 10
+GTL+ NTE
Sbjct: 302 TGTLIGYNTE 311


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 1 SGTLLVINTE 10
+G +L+I+TE
Sbjct: 317 NGNILIISTE 326




446|Sequence|2226|2235|VINTEDGKKR

>sp|RS4E_CALMQ|SMALL ribosomal subunit protein eS4|Caldivirga maquilingensis (strain

Query: 1 VINTEDGK 8
V+N EDGK
Sbjct: 159 VVNLEDGK 166


>sp|PELO_THEVO|PROTEIN pelota homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 2 INTEDGKK 9
I++EDGKK
Sbjct: 233 ISSEDGKK 240


>sp|MFNA_METBF|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina barkeri (strain

Query: 4 TEDGKK 9
TEDGKK
Sbjct: 117 TEDGKK 122


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 VINTEDGKK 9
+INT GKK
Sbjct: 553 IINTSSGKK 561


>sp|RL6_METMP|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 INTEDGK 8
I+TEDGK
Sbjct: 46 ISTEDGK 52


>sp|RL6_METM7|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 INTEDGK 8
I+TEDGK
Sbjct: 46 ISTEDGK 52


>sp|RL6_METM6|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 INTEDGK 8
I+TEDGK
Sbjct: 46 ISTEDGK 52


>sp|PYRB_THEPD|ASPARTATE carbamoyltransferase catalytic subunit|Thermofilum pendens (strain

Query: 1 VINTEDGKK 9
VIN DGK+
Sbjct: 132 VINAGDGKR 140


>sp|RL6_METM5|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 INTEDGK 8
I+TEDGK
Sbjct: 46 ISTEDGK 52


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VINTEDGKK 9
VIN ED +K
Sbjct: 962 VINPEDAEK 970


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 INTEDGKK 9
INTED K+
Sbjct: 598 INTEDAKE 605


>sp|RS7_METBU|SMALL ribosomal subunit protein uS7|Methanococcoides burtonii (strain DSM

Query: 2 INTEDGKKR 10
IN +DGK+R
Sbjct: 172 INRKDGKER 180


>sp|PYRB_HYPBU|ASPARTATE carbamoyltransferase catalytic subunit|Hyperthermus butylicus

Query: 1 VINTEDGKK 9
VIN DGK+
Sbjct: 129 VINAGDGKQ 137


>sp|PYRB_METS5|ASPARTATE carbamoyltransferase catalytic subunit|Metallosphaera sedula

Query: 1 VINTEDGKK 9
VIN DGK+
Sbjct: 117 VINAGDGKR 125


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 VINTEDGKK 9
+INT +GK+
Sbjct: 997 IINTSEGKQ 1005


>sp|SYFA_SULAC|PHENYLALANINE--TRNA ligase alpha subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 TEDGKKR 10
TE+GKKR
Sbjct: 61 TEEGKKR 67


>sp|PSB_METST|PROTEASOME subunit beta|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 INTEDGKK 9
I TE+GKK
Sbjct: 153 ITTEEGKK 160


>sp|SODF_SULAC|SUPEROXIDE dismutase [Fe]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VINTEDGKKR 10
V+N +D +KR
Sbjct: 195 VVNWDDAEKR 204


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 2 INTEDGKKR 10
I TE G+KR
Sbjct: 35 IETESGEKR 43


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 INTEDGKKR 10
I TE G+KR
Sbjct: 35 IETESGEKR 43


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 2 INTEDGKKR 10
I TE G+KR
Sbjct: 35 IETESGEKR 43


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM

Query: 2 INTEDGKKR 10
I TE G+KR
Sbjct: 33 IETESGEKR 41


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 2 INTEDGKKR 10
I TE G+KR
Sbjct: 32 IETESGEKR 40


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 2 INTEDGKKR 10
I TE G+KR
Sbjct: 33 IETESGEKR 41


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 2 INTEDGKKR 10
I TE G+KR
Sbjct: 33 IETESGEKR 41


>sp|SYY_METMJ|TYROSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VINTEDGKK 9
+IN DGKK
Sbjct: 200 IINGLDGKK 208


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VINTEDGKK 9
+ NTE+G+K
Sbjct: 128 IYNTEEGEK 136




447|Sequence|2231|2240|DGKKRHTLEK

>sp|VORB_PYRHO|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus horikoshii (strain ATCC

Query: 2 GKKRHTLEK 10
G KRH LEK
Sbjct: 164 GGKRHLLEK 172


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 2 GKKRHTLEK 10
G KRH LEK
Sbjct: 164 GGKRHFLEK 172


>sp|ARGB_METS3|ACETYLGLUTAMATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DGKKRHTL 8
DG+K+H+L
Sbjct: 269 DGRKKHSL 276


>sp|GLCD2_PICTO|GLUCOSE/GALACTOSE 1-dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 DGKKRHTL 8
DG KRH L
Sbjct: 304 DGAKRHYL 311


>sp|PUR7_METMJ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DGKKRHTLE 9
DG+K+ TLE
Sbjct: 36 DGEKKDTLE 44


>sp|VORB_PYRFU|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GKKRHTLEK 10
G +RH LEK
Sbjct: 164 GGRRHFLEK 172


>sp|LIPA_SACS2|LIPOYL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KKRHTLEK 10
KKR+TLE+
Sbjct: 235 KKRYTLEE 242


>sp|PUR7_METTH|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DGKKRHTLE 9
DG+K+ TLE
Sbjct: 38 DGEKKDTLE 46


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 KKRHTLEK 10
K RH LEK
Sbjct: 391 KNRHVLEK 398




448|Sequence|2236|2245|HTLEKMTDSV

>sp|RPIA_METTH|RIBOSE-5-PHOSPHATE isomerase A|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 HTLEKMTDS 9
HTLEK+ DS
Sbjct: 103 HTLEKIVDS 111


>sp|RS3A_HALMA|SMALL ribosomal subunit protein eS1|Haloarcula marismortui (strain ATCC

Query: 1 HTLEKMTDSV 10
HT E++ DSV
Sbjct: 149 HTFEQLIDSV 158


>sp|FEN_PYRNV|FLAP endonuclease 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 TLEKMTDSV 10
+LEKM D+V
Sbjct: 262 SLEKMLDTV 270


>sp|MTD_META3|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 3 LEKMTDSV 10
LEK TDSV
Sbjct: 248 LEKATDSV 255


>sp|NADA_METTH|QUINOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 HTLEKMTDSV 10
HTLEK+ +S+
Sbjct: 266 HTLEKVKNSL 275


>sp|SYFB_THEAC|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HTLEKMTDSV 10
H LEK DS+
Sbjct: 136 HDLEKTGDSI 145


>sp|RPIA_METVS|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus vannielii (strain ATCC 35089

Query: 1 HTLEKMTD 8
HT+EK+ D
Sbjct: 116 HTMEKIVD 123


>sp|RPIA_METM7|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C7 /

Query: 1 HTLEKMTD 8
HT+EK+ D
Sbjct: 116 HTMEKIVD 123


>sp|RPIA_METM5|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C5 /

Query: 1 HTLEKMTD 8
HT+EK+ D
Sbjct: 116 HTMEKIVD 123


>sp|RPIA_METM6|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C6 /

Query: 1 HTLEKMTD 8
HT+EK+ D
Sbjct: 116 HTMEKIVD 123


>sp|RPIA_METMP|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain DSM 14266

Query: 1 HTLEKMTD 8
HT+EK+ D
Sbjct: 116 HTMEKIVD 123


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 TLEKMTDSV 10
TL+ MTD V
Sbjct: 984 TLQTMTDKV 992


>sp|THSG_SACSH|CHAPERONIN subunit gamma|Saccharolobus shibatae (strain ATCC 51178

Query: 1 HTLEKMTDSV 10
HTLEK+ + V
Sbjct: 163 HTLEKIINLV 172


>sp|THSG_SACS2|CHAPERONIN subunit gamma|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HTLEKMTDSV 10
HTLEK+ + V
Sbjct: 163 HTLEKIINLV 172




449|Sequence|2241|2250|MTDSVTCLYC

>sp|Y1987_ARCFU|UNCHARACTERIZED protein AF_1987|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TDSVTCLYC 10
+D +TCL C
Sbjct: 95 SDKLTCLAC 103


>sp|RNP4_METKA|RIBONUCLEASE P protein component 4|Methanopyrus kandleri (strain AV19 /

Query: 4 SVTCLYC 10
SVTCL C
Sbjct: 93 SVTCLEC 99


>sp|RNP4_SULTO|RIBONUCLEASE P protein component 4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 6 TCLYC 10
TCLYC
Sbjct: 85 TCLYC 89


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 MTDSVTCLY 9
+ DSV C+Y
Sbjct: 81 LEDSVYCIY 89


>sp|MOAA_METTM|PROBABLE GTP 3',8-cyclase|Methanothermobacter marburgensis (strain ATCC

Query: 4 SVTCLYC 10
+V+C+YC
Sbjct: 23 NVSCIYC 29


>sp|PYRI_HALMA|ASPARTATE carbamoyltransferase regulatory chain|Haloarcula marismortui

Query: 3 DSVTCLYC 10
D V C YC
Sbjct: 133 DGVRCEYC 140


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 SVTCLYC 10
+++C+YC
Sbjct: 41 NLSCMYC 47


>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 SVTCLYC 10
+++C+YC
Sbjct: 41 NLSCMYC 47


>sp|RNP4_THEVO|RIBONUCLEASE P protein component 4|Thermoplasma volcanium (strain ATCC 51530

Query: 4 SVTCLYC 10
+VTCL C
Sbjct: 82 TVTCLEC 88


>sp|MOAA_METTH|PROBABLE GTP 3',8-cyclase|Methanothermobacter thermautotrophicus (strain

Query: 4 SVTCLYC 10
+V C+YC
Sbjct: 23 NVNCIYC 29


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DSVTCLYC 10
++ TC++C
Sbjct: 268 ENYTCIFC 275




450|Sequence|2246|2255|TCLYCNSFSK

>sp|RNP4_METM6|RIBONUCLEASE P protein component 4|Methanococcus maripaludis (strain C6 /

Query: 1 TCLYCNSFSK 10
TCL CNS ++
Sbjct: 93 TCLECNSITR 102


>sp|RNP4_METM5|RIBONUCLEASE P protein component 4|Methanococcus maripaludis (strain C5 /

Query: 1 TCLYCNSFSK 10
TCL CNS ++
Sbjct: 93 TCLECNSITR 102


>sp|PYRI_METB6|ASPARTATE carbamoyltransferase regulatory chain|Methanoregula boonei (strain

Query: 2 CLYCNS 7
CLYC+S
Sbjct: 149 CLYCDS 154


>sp|RNP4_METM7|RIBONUCLEASE P protein component 4|Methanococcus maripaludis (strain C7 /

Query: 1 TCLYCNSFSK 10
TCL CNS ++
Sbjct: 93 TCLECNSITR 102


>sp|PYRI_PICTO|ASPARTATE carbamoyltransferase regulatory chain|Picrophilus torridus (strain

Query: 2 CLYCN 6
CLYCN
Sbjct: 134 CLYCN 138


>sp|RNP4_METMP|RIBONUCLEASE P protein component 4|Methanococcus maripaludis (strain DSM 14266

Query: 1 TCLYCNSFSK 10
TCL CNS ++
Sbjct: 93 TCLECNSITR 102


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 2 CLYCNSFS 9
CL C SF+
Sbjct: 188 CLMCQSFA 195


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 2 CLYCNSFS 9
CL C SF+
Sbjct: 193 CLMCQSFA 200


>sp|Y1302_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1302|Methanocaldococcus jannaschii

Query: 2 CLYCNSF 8
CLYC+ F
Sbjct: 103 CLYCHDF 109


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CLYCNS 7
C++CNS
Sbjct: 171 CIHCNS 176


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CLYCNS 7
C++CNS
Sbjct: 171 CIHCNS 176


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 CLYCNS 7
C++CNS
Sbjct: 171 CIHCNS 176


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 CLYCNS 7
C++CNS
Sbjct: 171 CIHCNS 176


>sp|COFH_HALSA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Halobacterium salinarum (strain ATCC

Query: 2 CLYCN 6
CL+CN
Sbjct: 92 CLFCN 96


>sp|COFH_HALMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Haloarcula marismortui (strain ATCC

Query: 2 CLYCN 6
CL+CN
Sbjct: 100 CLFCN 104


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 LYCNSFSK 10
L CN FSK
Sbjct: 134 LSCNYFSK 141


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TCLYCNS 7
TC YC S
Sbjct: 142 TCPYCES 148


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 TCLYCNS 7
TC YC S
Sbjct: 142 TCPYCGS 148


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TCLYCNS 7
TC YC S
Sbjct: 670 TCPYCGS 676


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TCLYCNS 7
TC YC S
Sbjct: 671 TCPYCGS 677


>sp|PYRI_METMJ|ASPARTATE carbamoyltransferase regulatory chain|Methanoculleus marisnigri

Query: 2 CLYCN 6
CLYC+
Sbjct: 139 CLYCD 143


>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CLYCNSFS 9
CL C++FS
Sbjct: 223 CLACHAFS 230


>sp|DHYS_THEAC|PROBABLE deoxyhypusine synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 YCNSFS 9
YC SFS
Sbjct: 105 YCGSFS 110


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 CLYCNSFSK 10
C YC+S ++
Sbjct: 154 CPYCSSIAR 162


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TCLYCNSF 8
TC YC +
Sbjct: 56 TCTYCTYY 63


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TCLYCNSF 8
TC YC +
Sbjct: 56 TCTYCTYY 63


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TCLYCNSF 8
TC YC +
Sbjct: 53 TCTYCTYY 60


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TCLYCNSFSK 10
TC YC + ++
Sbjct: 166 TCPYCGAHAR 175


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TCLYCNS 7
+C+YC++
Sbjct: 43 SCMYCHN 49


>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TCLYCNS 7
+C+YC++
Sbjct: 43 SCMYCHN 49


>sp|RNP4_SULTO|RIBONUCLEASE P protein component 4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TCLYC 5
TCLYC
Sbjct: 85 TCLYC 89


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 2 CLYCNSFSK 10
C YC F K
Sbjct: 35 CKYCLPFKK 43


>sp|RNP4_SACS2|RIBONUCLEASE P protein component 4|Saccharolobus solfataricus (strain ATCC

Query: 1 TCLYCN 6
TCL CN
Sbjct: 82 TCLICN 87




451|Sequence|2251|2260|NSFSKQSKQK

>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SFSKQSKQK 10
+FSK SKQK
Sbjct: 457 TFSKLSKQK 465




452|Sequence|2256|2265|QSKQKNFLLV

***** No hits found ******


453|Sequence|2261|2270|NFLLVGTADG

>sp|NADE_SULAC|NH(3)-DEPENDENT NAD(+) synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NFLLVGTAD 9
N+L+VGT D
Sbjct: 136 NYLVVGTGD 144


>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NFLLVGTAD 9
N+L++GT D
Sbjct: 136 NYLVIGTGD 144


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 NFLLVGTADG 10
+FL+VG DG
Sbjct: 264 DFLVVGNPDG 273


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 NFLLVGTADG 10
+FL+VG DG
Sbjct: 264 DFLVVGNPDG 273


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 NFLLVGTADG 10
+FL+VG DG
Sbjct: 264 DFLVVGNPDG 273


>sp|Y1141_METJA|UNCHARACTERIZED protein MJ1141|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLLVGTAD 9
FLL+GT D
Sbjct: 66 FLLIGTED 73


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 1 NFLLVGTAD 9
N+++VGT D
Sbjct: 138 NYIVVGTGD 146


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NFLLVGTADG 10
NF++VG A G
Sbjct: 273 NFMVVGDAAG 282


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 NFLLVGTADG 10
NF++VGT G
Sbjct: 544 NFIVVGTGCG 553


>sp|HIS8_METS3|HISTIDINOL-PHOSPHATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NFLLVGTAD 9
NF+L+G D
Sbjct: 303 NFMLIGIKD 311


>sp|NADE_SACS2|NH(3)-DEPENDENT NAD(+) synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NFLLVGTAD 9
++L+VGT D
Sbjct: 135 DYLVVGTGD 143


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 4 LVGTADG 10
LVG ADG
Sbjct: 337 LVGAADG 343


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 4 LVGTADG 10
LVG ADG
Sbjct: 337 LVGAADG 343


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 NFLLVGTA 8
NF+L+G A
Sbjct: 109 NFVLIGVA 116


>sp|GLCD2_PICTO|GLUCOSE/GALACTOSE 1-dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 NFLLVGTADG 10
N LVG+ DG
Sbjct: 296 NISLVGSVDG 305


>sp|Y692_ARCFU|UNCHARACTERIZED protein AF_0692|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FLLVGTADG 10
FLL GTA G
Sbjct: 291 FLLAGTAYG 299


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NFLLVGTAD 9
NF LV T D
Sbjct: 37 NFYLVATTD 45


>sp|Y352_METJA|UNCHARACTERIZED protein MJ0352|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NFLLVGTAD 9
N ++VGTA+
Sbjct: 179 NIVMVGTAE 187


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 NFLLVGTADG 10
N+++VGT G
Sbjct: 544 NYIVVGTGCG 553




454|Sequence|2266|2275|GTADGKLAIF

>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 2 TADGKLAIF 10
T GKLA+F
Sbjct: 110 TTSGKLALF 118


>sp|MOAA_SULTO|PROBABLE GTP 3',8-cyclase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TADGKL 7
TADGKL
Sbjct: 253 TADGKL 258


>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TADGKL 7
TADGKL
Sbjct: 278 TADGKL 283


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 2 TADGKLAIF 10
T DGK+ +F
Sbjct: 449 TVDGKVKLF 457


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 2 TADGKLAIF 10
T GKLA+F
Sbjct: 110 TTAGKLALF 118


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTADGKL 7
GT DGK+
Sbjct: 611 GTVDGKI 617


>sp|GATE_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 1 GTADGKL 7
GT DGK+
Sbjct: 611 GTVDGKI 617




455|Sequence|2271|2280|KLAIFEDKTV

>sp|PSA_PYRAB|PROTEASOME subunit alpha|Pyrococcus abyssi (strain GE5 /

Query: 2 LAIFEDK 8
+AIFEDK
Sbjct: 174 MAIFEDK 180


>sp|Y160_METLZ|PUTATIVE HTH-type transcriptional regulatory protein|Methanocorpusculum

Query: 2 LAIFEDKTV 10
A+FE+KT+
Sbjct: 240 FAMFENKTI 248


>sp|R15PI_METJA|RIBOSE 1,5-bisphosphate isomerase|Methanocaldococcus jannaschii (strain

Query: 1 KLAIFEDK 8
++A+FEDK
Sbjct: 254 EVAVFEDK 261




456|Sequence|2276|2285|EDKTVKLKGA

>sp|PRNK_PYRFU|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PF0112|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EDKTVKLK 8
EDKT+KLK
Sbjct: 176 EDKTIKLK 183


>sp|PYRF_SACS2|OROTIDINE 5'-phosphate decarboxylase|Saccharolobus solfataricus (strain ATCC

Query: 1 EDKTVKLKGA 10
EDK +K KGA
Sbjct: 208 EDKVMKCKGA 217


>sp|SRP19_METKA|SIGNAL recognition particle 19 kDa|Methanopyrus kandleri (strain AV19 /

Query: 1 EDKTVKLKG 9
E TVKLKG
Sbjct: 3 ETPTVKLKG 11




457|Sequence|2281|2290|KLKGAAPLKI

>sp|RPO3_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma acidophilum (strain ATCC

Query: 1 KLKGAAP 7
KLKGA P
Sbjct: 189 KLKGACP 195


>sp|QUEE_THEKO|7-CARBOXY-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LKGAAPLKI 10
LKG APL I
Sbjct: 203 LKGLAPLVI 211


>sp|PUR5_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LKGAAPLKI 10
LKG P+K+
Sbjct: 307 LKGKVPVKV 315


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KLKGAAPLK 9
KL G+AP K
Sbjct: 318 KLSGSAPTK 326




458|Sequence|2286|2295|APLKILNIGN

>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PLKILNIG 9
PLKI NIG
Sbjct: 115 PLKIANIG 122


>sp|IF6_META3|TRANSLATION initiation factor 6|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PLKILNIGN 10
P+K LNIGN
Sbjct: 45 PVKALNIGN 53


>sp|IDI2_THEVO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PLKILNIG 9
P+KI NIG
Sbjct: 115 PIKIANIG 122


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LKILNIGN 10
+++LNIGN
Sbjct: 415 MRMLNIGN 422


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LKILNIGN 10
LKIL +GN
Sbjct: 408 LKILGVGN 415


>sp|IF2B_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 5 ILNIGN 10
ILNIGN
Sbjct: 35 ILNIGN 40


>sp|IF2B_METS5|TRANSLATION initiation factor 2 subunit|Metallosphaera sedula (strain ATCC

Query: 3 LKILNIGN 10
L I+N+GN
Sbjct: 34 LSIINVGN 41


>sp|THIM_METVS|HYDROXYETHYLTHIAZOLE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LKILNIGN 10
LK+L+IGN
Sbjct: 107 LKLLDIGN 114


>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 2 PLKILNI 8
P+KI+NI
Sbjct: 29 PIKIINI 35


>sp|FAEHP_METB6|BIFUNCTIONAL enzyme Fae/Hps|Methanoregula boonei (strain DSM 21154

Query: 1 APLKILNIGN 10
A +KIL+ GN
Sbjct: 231 ADMKILDTGN 240


>sp|FAEHP_METPE|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 APLKILNIGN 10
A +KIL+ GN
Sbjct: 231 ADMKILDTGN 240


>sp|FAEHP_METHJ|BIFUNCTIONAL enzyme Fae/Hps|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 APLKILNIGN 10
A +KIL+ GN
Sbjct: 231 ADMKILDTGN 240


>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KILNIGN 10
K+LN+GN
Sbjct: 299 KVLNVGN 305




459|Sequence|2291|2300|LNIGNVSTPL

>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 2 NIGNVSTP 9
NIG+++TP
Sbjct: 308 NIGDMNTP 315


>sp|G1PDH_HALSA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC 700922

Query: 1 LNIGNVSTP 9
LN+G VS P
Sbjct: 111 LNVGFVSVP 119


>sp|G1PDH_HALS3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC 29341

Query: 1 LNIGNVSTP 9
LN+G VS P
Sbjct: 111 LNVGFVSVP 119


>sp|Y294_THEVO|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma volcanium

Query: 1 LNIGNVSTPL 10
L+IGN+S+ L
Sbjct: 142 LSIGNISSYL 151


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NIGNVSTP 9
NIG+V TP
Sbjct: 835 NIGSVKTP 842


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LNIGNVSTP 9
LN GN TP
Sbjct: 476 LNFGNPETP 484


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans (strain

Query: 2 NIGNVSTPL 10
NIGNVS L
Sbjct: 397 NIGNVSREL 405


>sp|MTAA_METBA|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri

Query: 3 IGNVSTPL 10
+GN+S+P
Sbjct: 280 VGNISSPF 287


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NIGNVSTP 9
NIG+V TP
Sbjct: 460 NIGSVKTP 467


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GNVSTPL 10
GNV+TP+
Sbjct: 306 GNVNTPI 312


>sp|MTAA_METBF|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri (strain Fusaro /

Query: 3 IGNVSTPL 10
+GN+S+P
Sbjct: 280 VGNISSPF 287


>sp|DAPB_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LNIGNVSTPL 10
+ IGN+ PL
Sbjct: 50 IGIGNIGAPL 59




460|Sequence|2296|2305|VSTPLMCLSE

>sp|TRPA_HALVD|TRYPTOPHAN synthase alpha chain|Haloferax volcanii (strain ATCC 29605

Query: 1 VSTPLMCLS 9
VS PL+C++
Sbjct: 84 VSVPLVCMT 92




461|Sequence|2301|2310|MCLSESTNST

>sp|KHSE_HALSA|HOMOSERINE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 MCLSESTNST 10
+CL E+T ST
Sbjct: 160 VCLPETTVST 169


>sp|KHSE_HALS3|HOMOSERINE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 MCLSESTNST 10
+CL E+T ST
Sbjct: 160 VCLPETTVST 169




462|Sequence|2306|2315|STNSTERNVM

>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TNSTERNV 9
TNSTE+N+
Sbjct: 51 TNSTEKNL 58


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TNSTERNV 9
+N+TERN+
Sbjct: 131 SNATERNL 138




463|Sequence|2311|2320|ERNVMWGGCG

>sp|RNP2_METS3|RIBONUCLEASE P protein component 2|Methanobrevibacter smithii (strain ATCC

Query: 3 NVMWGGC 9
N++W GC
Sbjct: 34 NIVWNGC 40


>sp|Y938_METJA|UPF0014 membrane protein MJ0938|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ERNVMWG 7
ER+++WG
Sbjct: 155 ERDILWG 161


>sp|FLPA_PYRNV|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum neutrophilum (strain

Query: 1 ERNVMWGG 8
ER V WGG
Sbjct: 43 ERLVKWGG 50


>sp|HIS7_CALMQ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 NVMWG 7
NVMWG
Sbjct: 152 NVMWG 156


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ERNVMWGG 8
E NV+WG
Sbjct: 316 EANVIWGA 323


>sp|TRM56_METLZ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocorpusculum

Query: 1 ERNVMWGGC 9
E NV W C
Sbjct: 65 ENNVKWKSC 73


>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 6 WGGC 9
WGGC
Sbjct: 282 WGGC 285


>sp|Y1574_ARCFU|UNCHARACTERIZED protein AF_1574|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERNVMWGG 8
+R ++WGG
Sbjct: 254 QRAIVWGG 261


>sp|TRM14_METJA|TRNA (guanine(6)-N2)-methyltransferase|Methanocaldococcus jannaschii

Query: 1 ERNVMWGG 8
E NVM+GG
Sbjct: 364 EFNVMFGG 371


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RNVMWG----GC 9
RN+ WG GC
Sbjct: 229 RNIKWGVPIPGC 240


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 RNVMWG----GC 9
RN+ WG GC
Sbjct: 229 RNIKWGVPIPGC 240


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 RNVMWG----GC 9
RN+ WG GC
Sbjct: 229 RNIKWGVPIPGC 240


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 ERNVMWG 7
E N+ WG
Sbjct: 591 ENNIFWG 597


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 ERNVMWG 7
E N+ WG
Sbjct: 591 ENNIFWG 597


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 ERNVMWG 7
E N+ WG
Sbjct: 591 ENNIFWG 597


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 ERNVMWG 7
E N+ WG
Sbjct: 591 ENNIFWG 597


>sp|Y1962_ARCFU|UNCHARACTERIZED protein AF_1962|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 WGGCG 10
WG CG
Sbjct: 23 WGKCG 27


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 1 ERNVMWG 7
ER+ MWG
Sbjct: 511 ERHAMWG 517


>sp|GCH1L_ARCFU|GTP cyclohydrolase 1 type 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VMWGGCG 10
++WGG G
Sbjct: 66 LIWGGIG 72


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 1 ERNVMWGG 8
E NV+WG
Sbjct: 209 EPNVVWGA 216


>sp|Y576_METJA|UNCHARACTERIZED transporter MJ0576|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NVMWGG 8
N+ WGG
Sbjct: 109 NMFWGG 114




464|Sequence|2316|2325|WGGCGTKIFS

>sp|Y1962_ARCFU|UNCHARACTERIZED protein AF_1962|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WGGCGTKIF 9
WG CG K+
Sbjct: 23 WGKCGLKLL 31


>sp|RS3A_METVS|SMALL ribosomal subunit protein eS1|Methanococcus vannielii (strain ATCC

Query: 2 GGCGTKIFS 10
GG G+KI+S
Sbjct: 170 GGVGSKIYS 178


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GGCGTKI 8
G CGTKI
Sbjct: 9 GQCGTKI 15


>sp|CETZ_PYRHO|TUBULIN-LIKE protein CetZ|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GGCGTKI 8
G CGTKI
Sbjct: 9 GQCGTKI 15


>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GGCGTKI 8
G CGTKI
Sbjct: 9 GQCGTKI 15


>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GGCGTKIFS 10
GG GTKI +
Sbjct: 142 GGSGTKILA 150


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 WGGCGT 6
W CGT
Sbjct: 251 WASCGT 256


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 1 WGGCGTK 7
+G CGTK
Sbjct: 362 YGRCGTK 368


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GGCGTKI 8
GCG KI
Sbjct: 243 AGCGVKI 249


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 GCGTKIFS 10
GCG +FS
Sbjct: 796 GCGDYLFS 803


>sp|RS3A_METMP|SMALL ribosomal subunit protein eS1|Methanococcus maripaludis (strain DSM

Query: 2 GGCGTKIF 9
GG G+KI+
Sbjct: 170 GGLGSKIY 177


>sp|RS3A_METM7|SMALL ribosomal subunit protein eS1|Methanococcus maripaludis (strain C7

Query: 2 GGCGTKIF 9
GG G+KI+
Sbjct: 170 GGLGSKIY 177


>sp|RS3A_METM6|SMALL ribosomal subunit protein eS1|Methanococcus maripaludis (strain C6

Query: 2 GGCGTKIF 9
GG G+KI+
Sbjct: 170 GGLGSKIY 177


>sp|RS3A_METM5|SMALL ribosomal subunit protein eS1|Methanococcus maripaludis (strain C5

Query: 2 GGCGTKIF 9
GG G+KI+
Sbjct: 170 GGLGSKIY 177




465|Sequence|2321|2330|TKIFSFSNDF

>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 1 TKIFSFSNDF 10
T +FSF ND+
Sbjct: 209 TPVFSFYNDY 218


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 IFSFSNDF 10
IF F+N+F
Sbjct: 377 IFRFTNEF 384


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TKIFSFSNDF 10
K +SFSN+F
Sbjct: 66 AKEYSFSNEF 75




466|Sequence|2326|2335|FSNDFTIQKL

>sp|LYSX_SACS2|ALPHA-AMINOADIPATE--LYSW ligase LysX|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FSNDFTI 7
FSNDFTI
Sbjct: 31 FSNDFTI 37


>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 1 FSNDFTI 7
FSNDF I
Sbjct: 150 FSNDFKI 156


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 SNDFTIQK 9
S++FT+QK
Sbjct: 500 SHEFTVQK 507




467|Sequence|2331|2340|TIQKLIETRT

>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 1 TIQKLIETRT 10
T+QK++ +RT
Sbjct: 192 TVQKMVNSRT 201


>sp|NFI_NANEQ|BIFUNCTIONAL methyltransferase-like/endonuclease|Nanoarchaeum equitans (strain

Query: 3 QKLIETRT 10
+KLIET+T
Sbjct: 152 KKLIETKT 159


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 1 TIQKLIETR 9
TI++L+E+R
Sbjct: 986 TIEELVESR 994


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 3 QKLIETRT 10
+KL+ETRT
Sbjct: 759 EKLLETRT 766


>sp|RLME_METBF|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina barkeri

Query: 1 TIQKLIET 8
TIQK+I+T
Sbjct: 90 TIQKIIKT 97


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain ATCC

Query: 2 IQKLIETR 9
IQKLIE++
Sbjct: 157 IQKLIESK 164




468|Sequence|2336|2345|IETRTSQLFS

***** No hits found ******


469|Sequence|2341|2350|SQLFSYAAFS

***** No hits found ******


470|Sequence|2346|2355|YAAFSDSNII

>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 YAAFSDSNII 10
YA+F D+++I
Sbjct: 153 YASFEDADLI 162




471|Sequence|2351|2360|DSNIITVVVD

>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 SNIITVVVD 10
SN++TVV+D
Sbjct: 336 SNVVTVVID 344


>sp|RADB_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 1 DSNIITVVVD 10
DSN VVVD
Sbjct: 103 DSNFALVVVD 112


>sp|ACDE_METJA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanocaldococcus

Query: 2 SNIITVVVD 10
SN++T+ +D
Sbjct: 109 SNVVTISID 117


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 NIITVVVD 10
N+I +VVD
Sbjct: 429 NVINIVVD 436


>sp|HFLX_METJA|GTPASE HflX|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DSNIITVVVD 10
DS++I +VVD
Sbjct: 258 DSDLILIVVD 267




472|Sequence|2356|2365|TVVVDTALYI

>sp|IXTPA_PYRAE|DITP/XTP pyrophosphatase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VVVDTALYI 10
VV DT LYI
Sbjct: 62 VVDDTGLYI 70




473|Sequence|2361|2370|TALYIAKQNS

>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ALYIAKQNS 10
LY+A QN+
Sbjct: 860 GLYVASQNT 868


>sp|SYH_PYRCJ|HISTIDINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 TALYIAKQ 8
TA+YIA++
Sbjct: 347 TAIYIARE 354


>sp|HYPA_METAR|HYDROGENASE maturation factor HypA|Methanocella arvoryzae (strain DSM 22066

Query: 1 TALYIAKQNS 10
TAL AKQN+
Sbjct: 13 TALETAKQNN 22




474|Sequence|2366|2375|AKQNSPVVEV

>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 2 KQNSPVVEV 10
K+NSPV+ V
Sbjct: 103 KENSPVISV 111


>sp|PDXT_METB6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoregula boonei (strain

Query: 3 QNSPVVEV 10
++SPV+EV
Sbjct: 30 EDSPVIEV 37


>sp|HIS4_METMA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina mazei (strain

Query: 2 KQNSPVVE 9
++NSP++E
Sbjct: 62 RKNSPIIE 69


>sp|NADK_SACI7|NAD kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 KQNSPVVEV 10
KQN PV+ V
Sbjct: 53 KQNKPVIAV 61


>sp|NADK_SACI6|NAD kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KQNSPVVEV 10
KQN PV+ V
Sbjct: 53 KQNKPVIAV 61


>sp|NADK_SACI4|NAD kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KQNSPVVEV 10
KQN PV+ V
Sbjct: 53 KQNKPVIAV 61


>sp|NADK_SACI3|NAD kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 KQNSPVVEV 10
KQN PV+ V
Sbjct: 53 KQNKPVIAV 61


>sp|NADK_SACI2|NAD kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 KQNSPVVEV 10
KQN PV+ V
Sbjct: 53 KQNKPVIAV 61


>sp|NADK_SACI1|NAD kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 KQNSPVVEV 10
KQN PV+ V
Sbjct: 53 KQNKPVIAV 61




475|Sequence|2371|2380|PVVEVWDKKT

>sp|MTHZ_METTF|TYPE II methyltransferase M.MthZI|Methanothermobacter

Query: 1 PVVEVWDK 8
P+VE+WD+
Sbjct: 33 PMVEIWDR 40


>sp|GYAR_AERPE|GLYOXYLATE reductase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VEVWDK 8
VEVWDK
Sbjct: 26 VEVWDK 31


>sp|SYH_NANEQ|HISTIDINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PVVEVWD 7
P+VE WD
Sbjct: 41 PIVEYWD 47


>sp|PUR7_METB6|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 VEVWDKKT 10
+ +WDKKT
Sbjct: 198 MRLWDKKT 205


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 2 VVEVWDKK 9
VV +WD+K
Sbjct: 474 VVSLWDEK 481


>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 1 PVVEVWDK 8
P++E+WD+
Sbjct: 38 PMIEMWDE 45


>sp|PMDHS_ARCFU|PHOSPHOMEVALONATE dehydratase small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PVVEVWDKK 9
P+VEV D+K
Sbjct: 100 PLVEVRDEK 108


>sp|PUR7_METAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 WDKKT 10
WDKKT
Sbjct: 200 WDKKT 204


>sp|PUR7_METMA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 WDKKT 10
WDKKT
Sbjct: 200 WDKKT 204


>sp|PUR7_METBF|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 6 WDKKT 10
WDKKT
Sbjct: 200 WDKKT 204


>sp|Y1499_SULAC|PROBABLE glycosyltransferase Saci_1499|Sulfolobus acidocaldarius (strain

Query: 5 VWDKK 9
+WDKK
Sbjct: 73 IWDKK 77


>sp|Y373_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 2 VVEVWDKK 9
+V++WDK+
Sbjct: 130 LVKLWDKR 137


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VEVWDKKT 10
VE+WD T
Sbjct: 114 VEIWDLTT 121


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 1 PVVEVWDKK 9
P++ VWD +
Sbjct: 326 PLIAVWDPR 334




476|Sequence|2376|2385|WDKKTEKLCG

>sp|AMZA_HALSA|ARCHAEMETZINCIN salinarum (strain ATCC 700922

Query: 2 DKKTEKLCG 10
D+K E LCG
Sbjct: 158 DRKEENLCG 166


>sp|AMZA_HALS3|ARCHAEMETZINCIN salinarum (strain ATCC 29341

Query: 2 DKKTEKLCG 10
D+K E LCG
Sbjct: 158 DRKEENLCG 166


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WDKKTEKLC 9
W++ TEK C
Sbjct: 187 WERITEKTC 195


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WDKKTEKLCG 10
W +KT K+CG
Sbjct: 15 WIRKTCKVCG 24


>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KTEKLCG 10
+TEK+CG
Sbjct: 284 RTEKVCG 290


>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 4 KTEKLCG 10
+TEK+CG
Sbjct: 284 RTEKVCG 290


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WDKKTEKL 8
WD TE+L
Sbjct: 454 WDNATEQL 461


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WDKKTEKL 8
WD TE+L
Sbjct: 454 WDNATEQL 461


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WDKKTEKLC 9
WDK EKL
Sbjct: 380 WDKMIEKLI 388


>sp|RPIA_PICTO|RIBOSE-5-PHOSPHATE isomerase A|Picrophilus torridus (strain ATCC 700027

Query: 3 KKTEKLC 9
KK+E+LC
Sbjct: 55 KKSEELC 61


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 WDKKTEKLCG 10
W K+T +CG
Sbjct: 17 WIKRTCPVCG 26


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 WDKKTEKLC 9
W EKLC
Sbjct: 178 WSSIAEKLC 186


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 1 WDKKTEKL 8
WDK EK+
Sbjct: 10 WDKPGEKV 17


>sp|Y3997_METAC|UPF0288 protein MA_3997|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WDKKTEKLC 9
W++ EK C
Sbjct: 187 WEQLAEKTC 195


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 1 WDKKTEKL 8
W KK EK+
Sbjct: 329 WTKKEEKV 336


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WDKKTEKLC 9
W+++T K C
Sbjct: 157 WEEETIKYC 165


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 DKKTEK 7
DKKTEK
Sbjct: 551 DKKTEK 556


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 WDKKTEKLC 9
W+ +T +LC
Sbjct: 154 WEDETIRLC 162




477|Sequence|2381|2390|EKLCGLIDCV

>sp|RS2_THEPD|SMALL ribosomal subunit protein uS2|Thermofilum pendens (strain DSM

Query: 2 KLCGLIDC 9
K CGL+ C
Sbjct: 90 KFCGLVGC 97


>sp|TRPF_METTP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KLCGLID 8
K+CGL+D
Sbjct: 5 KICGLMD 11


>sp|Y2093_ARCFU|UNCHARACTERIZED protein AF_2093|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CGLIDC 9
C LIDC
Sbjct: 53 CSLIDC 58


>sp|LEU1_METKA|PROBABLE 2-isopropylmalate synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 KLCGLIDCV 10
++CGL CV
Sbjct: 69 EICGLARCV 77


>sp|KORB_METTH|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter thermautotrophicus

Query: 1 EKLCGLID 8
EK+C ++D
Sbjct: 262 EKICSMVD 269


>sp|Y645_METJA|UNCHARACTERIZED protein MJ0645|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LCGLIDCV 10
+CGLID +
Sbjct: 111 ICGLIDGI 118


>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EKLCGL 6
EK+CGL
Sbjct: 286 EKVCGL 291


>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 1 EKLCGL 6
EK+CGL
Sbjct: 286 EKVCGL 291


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 1 EKLCGLIDCV 10
+ +CGL+D V
Sbjct: 40 KSICGLMDPV 49


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 KLCGLIDC 9
K CG++ C
Sbjct: 362 KACGVVPC 369


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 1 EKLCGLIDCV 10
+KLC +ID V
Sbjct: 346 KKLCDIIDEV 355




478|Sequence|2386|2395|LIDCVHFLRE

>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 DCVHFLRE 10
DC+H++ E
Sbjct: 171 DCIHYIYE 178


>sp|GLKA_PYRHO|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus horikoshii (strain ATCC

Query: 3 DCVHFLRE 10
DC+H++ E
Sbjct: 176 DCIHYIYE 183


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IDCVHFLRE 10
++CV FL+E
Sbjct: 186 MECVSFLKE 194


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LIDCVHFL 8
+I C+HF+
Sbjct: 435 MISCMHFM 442


>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 VHFLRE 10
VHF+RE
Sbjct: 542 VHFIRE 547


>sp|HTAXP_HALS3|HEAT repeat-containing taxis protein OE_2401F|Halobacterium salinarum

Query: 1 LIDCVH 6
L+DC+H
Sbjct: 162 LVDCLH 167


>sp|PGP_METKA|PHOSPHOGLYCOLATE phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 2 IDCVHFLRE 10
+ C+ +LRE
Sbjct: 22 LKCIRYLRE 30


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 3 DCVHFLRE 10
+C++FLR+
Sbjct: 468 ECLNFLRQ 475


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DCVHFLRE 10
+C++FLR+
Sbjct: 468 ECLNFLRQ 475


>sp|Y560_METJA|UNCHARACTERIZED protein MJ0560|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIDCVHF 7
LIDC+ F
Sbjct: 68 LIDCIDF 74


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DCVHFLRE 10
+C++FL E
Sbjct: 540 NCIYFLEE 547


>sp|LEU1_METKA|PROBABLE 2-isopropylmalate synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 IDCVH 6
+DCVH
Sbjct: 89 VDCVH 93


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LIDCVHF 7
L+DC++F
Sbjct: 472 LVDCLNF 478


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 1 LIDCVHF 7
L+DC++F
Sbjct: 478 LVDCLNF 484


>sp|Y427_METJA|UNCHARACTERIZED protein MJ0427|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIDCVHFL 8
L +C+HFL
Sbjct: 13 LKECIHFL 20


>sp|ENGB_HALMA|PROBABLE GTP-binding protein EngB|Haloarcula marismortui (strain ATCC 43049

Query: 2 IDCVHFLRE 10
++ HFLRE
Sbjct: 122 VEMFHFLRE 130




479|Sequence|2391|2400|HFLREVMVKE

>sp|ENGB_HALMA|PROBABLE GTP-binding protein EngB|Haloarcula marismortui (strain ATCC 43049

Query: 1 HFLREVMVK 9
HFLREV V+
Sbjct: 126 HFLREVGVE 134


>sp|Y1119_ARCFU|UNCHARACTERIZED protein AF_1119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HFLREVMVK 9
H+++EV VK
Sbjct: 54 HYVKEVKVK 62


>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 HFLREVM 7
HF+REV+
Sbjct: 127 HFMREVL 133


>sp|GCH3_METTH|GTP cyclohydrolase III|Methanothermobacter thermautotrophicus (strain

Query: 1 HFLREVMVKE 10
HFL + ++KE
Sbjct: 163 HFLMKKLIKE 172


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 2 FLREVMVKE 10
FLREV+ E
Sbjct: 942 FLREVLADE 950


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HFLREVMVK 9
H LRE MVK
Sbjct: 445 HKLREKMVK 453


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 3 LREVMVKE 10
LRE +VKE
Sbjct: 121 LRETLVKE 128


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 3 LREVMVKE 10
LRE +VKE
Sbjct: 121 LRETLVKE 128


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 3 LREVMVKE 10
LRE +VKE
Sbjct: 121 LRETLVKE 128




480|Sequence|2396|2405|VMVKENKESK

>sp|COBS_THEON|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus onnurineus (strain NA1)

Query: 1 VMVKENKESK 10
VMVK N+E K
Sbjct: 76 VMVKGNRERK 85


>sp|Y855_METJA|UNCHARACTERIZED protein MJ0855|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VMVKENKESK 10
V+VK+NKE K
Sbjct: 163 VVVKDNKECK 172


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VMVKENKESK 10
+M++E ESK
Sbjct: 213 IMIREGSESK 222


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 2 MVKENKESK 10
++ ENKE+K
Sbjct: 467 LINENKETK 475




481|Sequence|2401|2410|NKESKHKMSY

>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 ESKHKMSY 10
+ KHK+SY
Sbjct: 665 DGKHKLSY 672


>sp|DGGGP_METST|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NKESKHKMS 9
+KES HK+S
Sbjct: 245 SKESMHKIS 253


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 NKESKHKMS 9
N+E+ H+MS
Sbjct: 18 NREALHQMS 26




482|Sequence|2406|2415|HKMSYSGRVK

>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain

Query: 1 HKMSYSGRV 9
H MS SGR+
Sbjct: 52 HAMSLSGRL 60


>sp|COBS_METKA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 SYSGRV 9
SYSGRV
Sbjct: 157 SYSGRV 162


>sp|DHQS_ARCFU|3-DEHYDROQUINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KMSYSGRVK 10
+ SY GRVK
Sbjct: 244 RKSYVGRVK 252


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HKMSYSGRVK 10
H + YSG+++
Sbjct: 27 HMLGYSGKIR 36




483|Sequence|2411|2420|SGRVKTLCLQ

>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 RVKTLCL 9
RVKT+C+
Sbjct: 361 RVKTICV 367


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 SGRVKTL 7
SGRV+TL
Sbjct: 360 SGRVRTL 366


>sp|TRMY_THEGJ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 1 SGRVKTLC 8
SGR+ LC
Sbjct: 26 SGRIDVLC 33


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 RVKTLC 8
RVKT+C
Sbjct: 432 RVKTMC 437


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SGRVKTL 7
+GRVKTL
Sbjct: 371 AGRVKTL 377


>sp|TRMY_METTP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanothrix

Query: 1 SGRVKTLC 8
SGR+ LC
Sbjct: 26 SGRIDVLC 33


>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GRVKTLCL 9
GR+K +C+
Sbjct: 330 GRIKAVCV 337




484|Sequence|2416|2425|TLCLQKNTAL

>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 TLCLQKNT 8
T+CLQK T
Sbjct: 671 TVCLQKVT 678


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 1 TLCLQKNTAL 10
T C Q NTA+
Sbjct: 218 TDCAQANTAM 227




485|Sequence|2421|2430|KNTALWIGTG

>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 2 NTALWIGTG 10
NTA++IG G
Sbjct: 224 NTAMFIGGG 232


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 6 WIGTG 10
WIGTG
Sbjct: 620 WIGTG 624


>sp|Y1064_METJA|UNCHARACTERIZED acetyltransferase MJ1064|Methanocaldococcus jannaschii (strain ATCC

Query: 5 LWIGTG 10
+WIGTG
Sbjct: 166 VWIGTG 171


>sp|NFI_THEPD|ENDONUCLEASE V|Thermofilum pendens (strain DSM 2475

Query: 2 NTALWI 7
NTA+WI
Sbjct: 186 NTAVWI 191


>sp|TH11_HALSA|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 1 KNTALWIGTG 10
+NT +W+ G
Sbjct: 80 RNTVVWLSCG 89


>sp|TH11_HALS3|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 1 KNTALWIGTG 10
+NT +W+ G
Sbjct: 80 RNTVVWLSCG 89


>sp|RL31_PYRAE|LARGE ribosomal subunit protein eL31|Pyrobaculum aerophilum (strain

Query: 2 NTALW 6
NTALW
Sbjct: 58 NTALW 62


>sp|OTC_HALWD|ORNITHINE carbamoyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 TALWIGTG 10
T +WIG G
Sbjct: 150 TVVWIGDG 157


>sp|ARLY_PYRIL|ARGININOSUCCINATE lyase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KNTALWIGTG 10
+ TA W+G G
Sbjct: 91 EETAGWVGLG 100


>sp|AGOG_METKA|N-GLYCOSYLASE/DNA lyase|Methanopyrus kandleri (strain AV19 /

Query: 2 NTALWIGT 9
++ LW+GT
Sbjct: 209 DSILWVGT 216


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 NTALWIGT 9
+ LW+GT
Sbjct: 159 SNTLWVGT 166


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KNTALWIGT 9
KNT L +GT
Sbjct: 111 KNTTLPVGT 119


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 4 ALWIGT 9
ALW GT
Sbjct: 77 ALWFGT 82


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 ALWIGT 9
A+W+GT
Sbjct: 77 AIWLGT 82




486|Sequence|2426|2435|WIGTGGGHIL

>sp|DMRX_METJA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanocaldococcus jannaschii (strain ATCC

Query: 1 WIGTGGGHIL 10
W TG GH+L
Sbjct: 13 WCITGAGHLL 22


>sp|DTDA_THEON|D-AMINOACYL-TRNA deacylase|Thermococcus onnurineus (strain NA1)

Query: 2 IGTGGGH 8
IG GGGH
Sbjct: 191 IGIGGGH 197


>sp|DTDA_PICTO|D-AMINOACYL-TRNA deacylase|Picrophilus torridus (strain ATCC 700027

Query: 2 IGTGGGH 8
IG GGGH
Sbjct: 174 IGIGGGH 180


>sp|DTDA_METMP|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IGTGGGH 8
IG GGGH
Sbjct: 176 IGIGGGH 182


>sp|DTDA_METM7|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C7 /

Query: 2 IGTGGGH 8
IG GGGH
Sbjct: 176 IGIGGGH 182


>sp|DTDA_METM5|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C5 /

Query: 2 IGTGGGH 8
IG GGGH
Sbjct: 176 IGIGGGH 182


>sp|DTDA_THEAC|D-AMINOACYL-TRNA deacylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WIGTGGGH 8
++G GGGH
Sbjct: 174 FVGVGGGH 181


>sp|DTDA_METVS|D-AMINOACYL-TRNA deacylase|Methanococcus vannielii (strain ATCC 35089

Query: 2 IGTGGGH 8
IG GGGH
Sbjct: 176 IGLGGGH 182


>sp|RNZ_SULTO|RIBONUCLEASE Z|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WIGTGGG 7
+IGTGGG
Sbjct: 6 FIGTGGG 12


>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 1 WIGTGGG 7
+IGTGGG
Sbjct: 6 FIGTGGG 12


>sp|DTDA_HALMA|D-AMINOACYL-TRNA deacylase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IGTGGGH 8
+G GGGH
Sbjct: 195 LGVGGGH 201


>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GTGGGH 8
G+GGGH
Sbjct: 440 GSGGGH 445


>sp|DTDA_THEKO|D-AMINOACYL-TRNA deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IGTGGGH 8
+G GGGH
Sbjct: 191 VGIGGGH 197


>sp|RTCA_DESA1|RNA 3'-terminal phosphate cyclase|Desulfurococcus amylolyticus

Query: 2 IGTGGGHIL 10
IG GGG IL
Sbjct: 10 IGEGGGQIL 18


>sp|DTDA_DESA1|D-AMINOACYL-TRNA deacylase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 IGTGGGH 8
IG GGGH
Sbjct: 190 IGIGGGH 196


>sp|DTDA_PYRFU|D-AMINOACYL-TRNA deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IGTGGGH 8
+G GGGH
Sbjct: 189 LGIGGGH 195


>sp|DTDA_PYRAB|D-AMINOACYL-TRNA deacylase|Pyrococcus abyssi (strain GE5 /

Query: 2 IGTGGGH 8
+G GGGH
Sbjct: 191 LGIGGGH 197


>sp|DTDA_METTP|D-AMINOACYL-TRNA deacylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IGTGGGH 8
+G GGGH
Sbjct: 181 LGIGGGH 187


>sp|HCY_NATPH|HALOCYANIN pharaonis (Natronobacterium pharaonis)

Query: 1 WIGTGGGH 8
W G GG H
Sbjct: 103 WTGDGGAH 110


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 2 IGTGGGHIL 10
IG GGG IL
Sbjct: 8 IGEGGGQIL 16


>sp|GUAAB_PICTO|GMP synthase [glutamine-hydrolyzing] subunit B|Picrophilus torridus

Query: 1 WIGTGGG 7
WI +GGG
Sbjct: 130 WIESGGG 136


>sp|GATD_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma volcanium (strain ATCC

Query: 2 IGTGGGHI 9
+GTG GHI
Sbjct: 304 MGTGLGHI 311


>sp|DMRX_METMA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WIGTGGGHIL 10
W TG GH L
Sbjct: 8 WGITGAGHFL 17


>sp|TRPD_PICTO|ANTHRANILATE phosphoribosyltransferase|Picrophilus torridus (strain ATCC

Query: 2 IGTGGGH 8
+GTGG H
Sbjct: 74 VGTGGDH 80


>sp|DTDA_PYRHO|D-AMINOACYL-TRNA deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IGTGGGH 8
+G GGGH
Sbjct: 193 LGIGGGH 199


>sp|PGK_METKA|PHOSPHOGLYCERATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 5 GGGHIL 10
GGGHI+
Sbjct: 356 GGGHII 361


>sp|RTCA_SULTO|RNA 3'-terminal phosphate cyclase|Sulfurisphaera tokodaii (strain DSM

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 9 GEGGGQIL 16


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GTGGGH 8
G GGGH
Sbjct: 397 GNGGGH 402


>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 3 GTGGGH 8
G GGGH
Sbjct: 195 GVGGGH 200


>sp|ARLY_PYRCJ|ARGININOSUCCINATE lyase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 WIGTGG 6
WIG GG
Sbjct: 7 WIGGGG 12


>sp|QUEC_METB6|7-CYANO-7-DEAZAGUANINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 IGTGGGHIL 10
IG G GH+
Sbjct: 110 IGIGAGHLF 118


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 TGGGHI 9
+GGGHI
Sbjct: 116 SGGGHI 121


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 4 TGGGHI 9
+GGGHI
Sbjct: 122 SGGGHI 127


>sp|GPMI_HALMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IGTGGGHIL 10
IG GGH L
Sbjct: 437 IGAAGGHAL 445


>sp|G1PDH_METB6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoregula boonei (strain DSM 21154

Query: 2 IGTGGGHIL 10
IG GGG ++
Sbjct: 102 IGVGGGRVI 110


>sp|DTDA_THEGJ|D-AMINOACYL-TRNA deacylase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 IGTGGGH 8
+G GGGH
Sbjct: 192 LGIGGGH 198


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 GTGGGHIL 10
G GGHI+
Sbjct: 33 GVAGGHIV 40


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 4 TGGGHI 9
+GGGHI
Sbjct: 116 SGGGHI 121


>sp|SYH_PYRAR|HISTIDINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 WIGTGGG 7
W+ GGG
Sbjct: 287 WLAVGGG 293


>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WIGTGG 6
W+G GG
Sbjct: 86 WLGNGG 91


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 GTGGGHIL 10
G GGHI+
Sbjct: 33 GIAGGHIV 40


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 2 IGTGGGHIL 10
+G GGG I+
Sbjct: 92 LGVGGGSII 100


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 GGGHI 9
GGGHI
Sbjct: 361 GGGHI 365


>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GGGHI 9
GGGHI
Sbjct: 354 GGGHI 358


>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 GGGHI 9
GGGHI
Sbjct: 361 GGGHI 365


>sp|GATD_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina acetivorans (strain ATCC

Query: 3 GTGGGHI 9
GTG GHI
Sbjct: 327 GTGLGHI 333


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 2 IGTGGGHIL 10
IG GGG ++
Sbjct: 103 IGVGGGRVI 111


>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 2 IGTGGGHIL 10
+G GGGH +
Sbjct: 97 MGIGGGHFV 105


>sp|GATD_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrobaculum aerophilum (strain ATCC

Query: 3 GTGGGHI 9
GTG GH+
Sbjct: 315 GTGFGHV 321


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IGTGGGHIL 10
IG GGG ++
Sbjct: 102 IGVGGGRVI 110


>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 WIGTGGGHIL 10
W+G GG +L
Sbjct: 63 WLGRLGGSVL 72


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GTGGGH 8
G GGGH
Sbjct: 277 GAGGGH 282


>sp|RTCA_SULAC|RNA 3'-terminal phosphate cyclase|Sulfolobus acidocaldarius (strain

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 9 GEGGGQIL 16


>sp|DTDA_THEVO|D-AMINOACYL-TRNA deacylase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WIGTGGGH 8
++ GGGH
Sbjct: 174 FVAVGGGH 181


>sp|GATD_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma acidophilum (strain ATCC

Query: 2 IGTGGGHI 9
+GTG GH+
Sbjct: 304 LGTGLGHM 311


>sp|Y611_METJA|PUTATIVE zinc metalloprotease MJ0611|Methanocaldococcus jannaschii (strain

Query: 1 WIGTGGGHI 9
WIG G HI
Sbjct: 138 WIGIFGFHI 146


>sp|RTCA_PYRAE|RNA 3'-terminal phosphate cyclase|Pyrobaculum aerophilum (strain ATCC

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 10 GEGGGQIL 17


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 9 GEGGGQIL 16


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 3 GTGGGHI 9
GTG GH+
Sbjct: 346 GTGLGHV 352


>sp|GATD_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanobrevibacter smithii (strain ATCC

Query: 3 GTGGGHI 9
GTG GH+
Sbjct: 334 GTGLGHV 340


>sp|GATD_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 3 GTGGGHI 9
GTG GH+
Sbjct: 328 GTGLGHV 334


>sp|GATD_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcoides burtonii (strain DSM

Query: 3 GTGGGHI 9
GTG GH+
Sbjct: 318 GTGLGHV 324


>sp|GATD_HALWD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GTGGGHI 9
GTG GH+
Sbjct: 346 GTGLGHV 352


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 2 IGTGGGHIL 10
+G GGG IL
Sbjct: 8 MGEGGGQIL 16


>sp|GATD_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 3 GTGGGHI 9
GTG GH+
Sbjct: 321 GTGFGHV 327


>sp|DPHB_AERPE|DIPHTHINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GTGGGH 8
G GGGH
Sbjct: 219 GAGGGH 224


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 3 GTGGGH 8
G GGGH
Sbjct: 275 GAGGGH 280


>sp|G1PDH_METPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaerula palustris (strain ATCC

Query: 2 IGTGGGHIL 10
IG GGG ++
Sbjct: 102 IGVGGGRVI 110


>sp|RTCA_PYRNV|RNA 3'-terminal phosphate cyclase|Pyrobaculum neutrophilum (strain

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 10 GEGGGQIL 17


>sp|GATD_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 3 GTGGGHI 9
GTG GH+
Sbjct: 330 GTGLGHV 336


>sp|GATD_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 3 GTGGGHI 9
GTG GH+
Sbjct: 330 GTGLGHV 336


>sp|RIB7_SACS2|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Saccharolobus solfataricus (strain ATCC

Query: 5 GGGHIL 10
GGGH++
Sbjct: 144 GGGHLI 149


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 3 GTGGGHI 9
GTG GH+
Sbjct: 323 GTGLGHV 329


>sp|FRHD_METTH|COENZYME F420 hydrogenase subunit delta|Methanothermobacter

Query: 3 GTGGGHIL 10
GTGG H +
Sbjct: 49 GTGGPHFV 56


>sp|RTCA_SACS2|RNA 3'-terminal phosphate cyclase|Saccharolobus solfataricus (strain

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 9 GEGGGQIL 16


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GTGGGH 8
G GGGH
Sbjct: 277 GAGGGH 282


>sp|FKBPL_METTH|LONG-TYPE peptidyl-prolyl cis-trans isomerase|Methanothermobacter

Query: 5 GGGHIL 10
GGGH++
Sbjct: 51 GGGHLI 56


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 1 WIGTGGGHIL 10
W+ T G H++
Sbjct: 101 WLHTRGRHVI 110


>sp|RTCA_SACI4|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 9 GEGGGQIL 16


>sp|RTCA_SACI3|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 9 GEGGGQIL 16


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro /

Query: 3 GTGGGHI 9
GTG GH+
Sbjct: 327 GTGLGHV 333


>sp|RTCA_SACI7|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 9 GEGGGQIL 16


>sp|RTCA_SACI6|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 9 GEGGGQIL 16


>sp|RTCA_SACI2|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 9 GEGGGQIL 16


>sp|RTCA_SACI1|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 9 GEGGGQIL 16


>sp|G1PDH_METST|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaera stadtmanae (strain ATCC

Query: 2 IGTGGGHIL 10
+G GGG ++
Sbjct: 89 LGVGGGKVI 97


>sp|G1PDH_METS3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanobrevibacter smithii (strain ATCC

Query: 2 IGTGGGHIL 10
+G GGG ++
Sbjct: 89 LGVGGGKVI 97


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain

Query: 2 IGTGGGHIL 10
+G GGG IL
Sbjct: 10 MGEGGGQIL 18


>sp|RTCA_ARCFU|RNA 3'-terminal phosphate cyclase|Archaeoglobus fulgidus (strain ATCC

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 9 GEGGGQIL 16


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 3 GTGGGHI 9
GTG GH+
Sbjct: 348 GTGLGHV 354


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 11 GEGGGQIL 18


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 3 GTGGGHIL 10
G GGG IL
Sbjct: 10 GEGGGQIL 17




487|Sequence|2431|2440|GGHILLLDLS

>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGHILLLDL 9
GGH+ +LD+
Sbjct: 150 GGHVCVLDV 158


Query: 1 GGHILLLDLS 10
GG++ LLD++
Sbjct: 687 GGYVYLLDIN 696


>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 1 GGHILLLDL 9
G HI LLDL
Sbjct: 17 GCHISLLDL 25


>sp|VHUG_METJA|F420-NON-REDUCING hydrogenase vhu subunit G|Methanocaldococcus jannaschii (strain

Query: 1 GGHILLLDL 9
G HI LLDL
Sbjct: 18 GCHISLLDL 26


>sp|GLYA_METPE|SERINE hydroxymethyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 HILLLDLS 10
H++L+DLS
Sbjct: 312 HLILIDLS 319


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 1 GGHILLLDLS 10
GG IL LDLS
Sbjct: 94 GGKILKLDLS 103


>sp|SELB_METJA|SELENOCYSTEINE-SPECIFIC elongation factor|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGHILLLDL 9
G H+L+LDL
Sbjct: 105 GEHLLVLDL 113


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GHILLLDLS 10
GH+ L+D+S
Sbjct: 293 GHVDLIDVS 301


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GHILLLD 8
GH+LLL+
Sbjct: 25 GHLLLLE 31




488|Sequence|2436|2445|LLDLSTRRLI

>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LDLSTRRLI 10
LD+ TRR+I
Sbjct: 159 LDIDTRRII 167


>sp|DHA_METMP|ALANINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LLDLSTRRL 9
+LD++TRRL
Sbjct: 196 ILDVNTRRL 204


>sp|BRP_HALSA|PROBABLE beta-carotene 15,15'-dioxygenase Brp|Halobacterium salinarum

Query: 3 DLSTRRLI 10
D++TRRL+
Sbjct: 188 DIATRRLV 195


>sp|BRP_HALS3|PROBABLE beta-carotene 15,15'-dioxygenase Brp|Halobacterium salinarum

Query: 3 DLSTRRLI 10
D++TRRL+
Sbjct: 188 DIATRRLV 195


>sp|HTR6_HALS3|TRANSDUCER protein Htr6|Halobacterium salinarum (strain ATCC 29341

Query: 2 LDLSTRRL 9
+DLSTRR+
Sbjct: 338 VDLSTRRI 345


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 LDLSTRRLI 10
+DLST+++I
Sbjct: 1 MDLSTKKVI 9




489|Sequence|2441|2450|TRRLIRVIYN

>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RRLIRVIYN 10
RRLIR I+N
Sbjct: 1162 RRLIRAIFN 1170


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LIRVIYN 10
LIRV YN
Sbjct: 767 LIRVFYN 773


>sp|TLDD_SACS2|ZINC metalloprotease TldD homolog|Saccharolobus solfataricus (strain

Query: 5 IRVIYN 10
IRVIYN
Sbjct: 47 IRVIYN 52


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RRLIRVIYN 10
+RLI VI+N
Sbjct: 410 KRLIEVIHN 418




490|Sequence|2446|2455|RVIYNFCNSV

>sp|Y1339_METJA|UNCHARACTERIZED protein MJ1339|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IYNFCN 8
+YNFCN
Sbjct: 123 VYNFCN 128


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 3 IYNFCNS 9
IYN CNS
Sbjct: 727 IYNICNS 733


>sp|MTSB_METMA|METHYLATED-THIOL--CORRINOID protein MtsB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RVIYNFCNSV 10
R + FCNSV
Sbjct: 237 RFVETFCNSV 246


>sp|PURQ_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Halobacterium salinarum (strain ATCC 700922

Query: 1 RVIYNFCNS 9
RV++ +CN+
Sbjct: 161 RVLFRYCNA 169


>sp|PROB_NATPD|GLUTAMATE 5-kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 NFCNSV 10
NFCN+V
Sbjct: 137 NFCNTV 142


>sp|TRPG_SACS2|ANTHRANILATE synthase component 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RVIYNFCNSV 10
+++YNF N V
Sbjct: 186 KILYNFLNRV 195


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IYNFCNS 9
IY+FC S
Sbjct: 321 IYDFCQS 327


>sp|PURQ_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RVIYNFCNS 9
RVI+ +C++
Sbjct: 161 RVIFRYCDA 169


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 YNFCNSV 10
Y+FCN++
Sbjct: 519 YDFCNNL 525


>sp|Y1627_METJA|UPF0179 protein MJ1627|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YNFCNS 9
Y+FCNS
Sbjct: 108 YSFCNS 113


>sp|TRPD_METST|ANTHRANILATE phosphoribosyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 RVIYNFCNSV 10
++IYN N+V
Sbjct: 281 QIIYNILNNV 290


>sp|Y1497_METJA|UNCHARACTERIZED metallohydrolase MJ1497|Methanocaldococcus jannaschii (strain ATCC

Query: 3 IYNFC 7
IYNFC
Sbjct: 122 IYNFC 126




491|Sequence|2451|2460|FCNSVRVMMT

***** No hits found ******


492|Sequence|2456|2465|RVMMTAQLGS

>sp|ENO_THEKO|ENOLASE kodakarensis (strain ATCC BAA-918

Query: 2 VMMTAQLGS 10
VM+T +LGS
Sbjct: 300 VMITKELGS 308




493|Sequence|2461|2470|AQLGSLKNVM

>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 1 AQLGSLKNV 9
A+LG+L+NV
Sbjct: 103 AELGALRNV 111


>sp|RIBL_METSF|FAD synthase|Methanocaldococcus sp. (strain FS406-22)

Query: 1 AQLGSLKN 8
A LGSLKN
Sbjct: 72 AVLGSLKN 79


>sp|RIBL_METJA|FAD synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AQLGSLKN 8
A LGSLKN
Sbjct: 70 AILGSLKN 77


>sp|RIBL_METFA|FAD synthase|Methanocaldococcus fervens (strain DSM 4213

Query: 1 AQLGSLKN 8
A LGSLKN
Sbjct: 71 AILGSLKN 78




494|Sequence|2466|2475|LKNVMLVLGY

>sp|HTR4_HALSA|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 700922

Query: 2 KNVMLVLG 9
+NV+L+LG
Sbjct: 296 ENVLLILG 303


>sp|HTR4_HALS3|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 29341

Query: 2 KNVMLVLG 9
+NV+L+LG
Sbjct: 296 ENVLLILG 303


>sp|K6PF_METJA|BIFUNCTIONAL ADP-specific glucokinase/phosphofructokinase|Methanocaldococcus

Query: 1 LKNVMLVLGY 10
+ NV+ +LGY
Sbjct: 303 IANVLHILGY 312




495|Sequence|2471|2480|LVLGYNRKNT

>sp|Y3409_METJA|UNCHARACTERIZED protein MJECS09|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVLGYNRKNT 10
L+LGYNR N
Sbjct: 144 LILGYNRINV 153


>sp|TRPC_THEAC|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LVLGYNRKN 9
++LGYNR++
Sbjct: 168 VILGYNRRD 176


>sp|TRPC_PICTO|INDOLE-3-GLYCEROL phosphate synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 LVLGYNRKN 9
+++GYNR+N
Sbjct: 171 VIIGYNRRN 179


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LVLGYNRKNT 10
++ GY+RK T
Sbjct: 227 VIFGYSRKGT 236


>sp|APT_CENSY|ADENINE phosphoribosyltransferase|Cenarchaeum symbiosum (strain A)

Query: 2 VLGYNRKN 9
+ GYNRK+
Sbjct: 159 IAGYNRKS 166


>sp|RL1_METTP|LARGE ribosomal subunit protein uL1|Methanothrix thermoacetophila

Query: 2 VLGYNRKN 9
+LG NRKN
Sbjct: 87 LLGENRKN 94


>sp|Y1038_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 LVLGYNRKNT 10
L GY+RK T
Sbjct: 105 LNFGYSRKET 114


>sp|SYFA_PYRAB|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 LVLGYNRK 8
+ LGYN K
Sbjct: 1 MTLGYNEK 8


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LVLGYN 6
L+LGYN
Sbjct: 890 LILGYN 895


>sp|TRPC_THEVO|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LVLGYNRKN 9
+++GYNR++
Sbjct: 168 VMIGYNRRD 176




496|Sequence|2476|2485|NRKNTEGTQK

>sp|MTAP_NITMS|S-METHYL-5'-THIOADENOSINE phosphorylase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 KNTEGTQK 10
KN EGT+K
Sbjct: 230 KNVEGTKK 237


>sp|LEU3_METJA|3-ISOPROPYLMALATE/3-METHYLMALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RKNTEGTQK 10
R+NTEG K
Sbjct: 112 RENTEGLYK 120


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 NRKNTEGT 8
NR+N +GT
Sbjct: 422 NRQNEDGT 429




497|Sequence|2481|2490|EGTQKQKEIQ

>sp|RNZ_PICTO|RIBONUCLEASE Z|Picrophilus torridus (strain ATCC 700027

Query: 1 EGTQKQ 6
EGTQKQ
Sbjct: 41 EGTQKQ 46


>sp|RNZ_THEAC|RIBONUCLEASE Z|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EGTQKQ 6
EGTQKQ
Sbjct: 41 EGTQKQ 46


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 1 EGTQKQKEI 9
EG ++QKE+
Sbjct: 148 EGNEEQKEL 156


>sp|RNZ_THEVO|RIBONUCLEASE Z|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EGTQKQ 6
EGTQKQ
Sbjct: 41 EGTQKQ 46


>sp|RPO11_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermoplasma acidophilum (strain

Query: 2 GTQKQKEIQ 10
GTQ QKE Q
Sbjct: 91 GTQFQKEFQ 99


>sp|KTHY2_SULTO|PROBABLE thymidylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EGTQKQKEIQ 10
+GT+ KEIQ
Sbjct: 189 DGTKTPKEIQ 198




498|Sequence|2486|2495|QKEIQSCLTV

>sp|SIHH_METJA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEIQSCLT 9
KE+++C+T
Sbjct: 311 KEVRNCVT 318




499|Sequence|2491|2500|SCLTVWDINL

>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 2 CLTVWDIN 9
C T WD++
Sbjct: 258 CCTAWDVS 265


>sp|MOAC_SACS2|PROBABLE cyclic pyranopterin monophosphate synthase|Saccharolobus

Query: 1 SCLTVWDI 8
S LT+WD+
Sbjct: 112 SLLTIWDM 119


>sp|MOAC_METLZ|PROBABLE cyclic pyranopterin monophosphate synthase|Methanocorpusculum

Query: 1 SCLTVWDI 8
S LT+WD+
Sbjct: 120 SLLTIWDM 127


>sp|Y337_METJA|UNCHARACTERIZED protein MJ0337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SCLTVWDINL 10
S TV+DINL
Sbjct: 71 SPFTVFDINL 80


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 CLTVWDIN 9
C+T WD++
Sbjct: 685 CVTRWDLS 692


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 5 VWDIN 9
VWDIN
Sbjct: 438 VWDIN 442


>sp|MOAC_METMA|PROBABLE cyclic pyranopterin monophosphate synthase|Methanosarcina mazei

Query: 3 LTVWDI 8
LTVWD+
Sbjct: 122 LTVWDM 127


>sp|MOAC_METAC|PROBABLE cyclic pyranopterin monophosphate synthase|Methanosarcina

Query: 3 LTVWDI 8
LTVWD+
Sbjct: 125 LTVWDM 130


>sp|MOAC_AERPE|PROBABLE cyclic pyranopterin monophosphate synthase|Aeropyrum pernix (strain

Query: 3 LTVWDI 8
LTVWD+
Sbjct: 113 LTVWDM 118


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 3 LTVWDIN 9
LT WDI+
Sbjct: 425 LTAWDIS 431


>sp|HISX_PYRFU|HISTIDINOL dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LTVWD 7
LTVWD
Sbjct: 329 LTVWD 333


>sp|MOAC_THEON|PROBABLE cyclic pyranopterin monophosphate synthase|Thermococcus onnurineus

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 121 LTIWDM 126


>sp|MOAC_THEKO|PROBABLE cyclic pyranopterin monophosphate synthase|Thermococcus

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 121 LTIWDM 126


>sp|MOAC_SULTO|PROBABLE cyclic pyranopterin monophosphate synthase|Sulfurisphaera tokodaii

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 113 LTIWDM 118


>sp|MOAC_SULAC|PROBABLE cyclic pyranopterin monophosphate synthase|Sulfolobus

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 108 LTIWDM 113


>sp|MOAC_PYRFU|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrococcus furiosus

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 120 LTIWDM 125


>sp|MOAC_PYRAE|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrobaculum aerophilum

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 216 LTIWDM 221


>sp|MOAC_PYRAB|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrococcus abyssi

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 122 LTIWDM 127


>sp|MOAC_METPE|PROBABLE cyclic pyranopterin monophosphate synthase|Methanosphaerula

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 121 LTIWDM 126


>sp|MOAC_METJA|PROBABLE cyclic pyranopterin monophosphate synthase|Methanocaldococcus

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 119 LTIWDM 124


>sp|MOAC_METHJ|PROBABLE cyclic pyranopterin monophosphate synthase|Methanospirillum

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 121 LTIWDM 126


>sp|MOAC_METBU|PROBABLE cyclic pyranopterin monophosphate synthase|Methanococcoides

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 121 LTIWDM 126


>sp|MOAC_METB6|PROBABLE cyclic pyranopterin monophosphate synthase|Methanoregula boonei

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 121 LTIWDM 126


>sp|MOAC_ARCFU|PROBABLE cyclic pyranopterin monophosphate synthase|Archaeoglobus fulgidus

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 120 LTIWDM 125


>sp|MOAC_METTH|PROBABLE cyclic pyranopterin monophosphate synthase|Methanothermobacter

Query: 3 LTVWDI 8
LT+WD+
Sbjct: 124 LTIWDM 129


>sp|MPTA_THEAC|GTP cyclohydrolase MptA|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LTVWDI 8
+TVWD+
Sbjct: 191 ITVWDL 196


>sp|Y1134_METJA|UNCHARACTERIZED protein MJ1134|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LTVWDINL 10
L WD+N+
Sbjct: 24 LNPWDVNI 31


>sp|NEP1_THEVO|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma volcanium (strain

Query: 3 LTVWDINL 10
LT+W + L
Sbjct: 202 LTIWSVGL 209




500|Sequence|2496|2505|WDINLPHEVQ

>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WDINLPHEVQ 10
WD NLP E +
Sbjct: 160 WDENLPEEFK 169


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 1 WDINLP 6
WD NLP
Sbjct: 732 WDFNLP 737


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM

Query: 2 DINLPHEVQ 10
D NLP EV+
Sbjct: 80 DANLPEEVE 88


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 4 NLPHEV 9
N+PHEV
Sbjct: 157 NVPHEV 162


>sp|SURE_METBU|5'-NUCLEOTIDASE SurE|Methanococcoides burtonii (strain DSM 6242

Query: 2 DINLPHEVQ 10
+IN+PH V+
Sbjct: 176 NINIPHFVE 184


>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DINLPHEV 9
D+NLP+++
Sbjct: 278 DMNLPYDI 285


>sp|TF2B2_HALSA|TRANSCRIPTION initiation factor IIB 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 DINLPHEVQ 10
D++LP EV+
Sbjct: 246 DLDLPDEVE 254


>sp|HIS1_SULAC|ATP phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 WDINLPHEVQ 10
WD N P +++
Sbjct: 100 WDYNSPDQIK 109


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 WDINLPHEVQ 10
W++N P E++
Sbjct: 483 WEVNHPEELK 492


>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 1 WDINLPHEV 9
W ++LP E+
Sbjct: 172 WALDLPEEI 180


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 4 NLPHEVQ 10
NLPHE +
Sbjct: 315 NLPHEAR 321


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 1 WDINLPHEV 9
W + LP E+
Sbjct: 173 WALQLPEEI 181


>sp|TRM56_METS5|TRNA (cytidine(56)-2'-O)-methyltransferase|Metallosphaera sedula

Query: 1 WDINLPH 7
+ INLPH
Sbjct: 83 YGINLPH 89


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 1 WDINLPHEV 9
W++N P E+
Sbjct: 496 WEVNEPEEL 504


>sp|ENGB_HALLT|PROBABLE GTP-binding protein EngB|Halorubrum lacusprofundi (strain ATCC

Query: 4 NLPHEVQ 10
N+PH+V+
Sbjct: 117 NIPHDVE 123




501|Sequence|2501|2510|PHEVQNLEKH

>sp|TMG10_PYRAB|TRNA (guanine(10)-N2)-dimethyltransferase|Pyrococcus abyssi (strain GE5

Query: 2 HEVQNLEK 9
HEV+NLEK
Sbjct: 98 HEVKNLEK 105


>sp|IMDH_KORCO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PHEVQNLEK 9
PH+V+ LEK
Sbjct: 465 PHDVKPLEK 473


>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PHEVQNL 7
PHEV+N+
Sbjct: 12 PHEVENI 18


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 1 PHEVQNLEK 9
PH ++ LEK
Sbjct: 460 PHYIEKLEK 468


>sp|Y1581_ARCFU|UNCHARACTERIZED protein AF_1581|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PHEVQNLEK 9
PH+V+N+ K
Sbjct: 45 PHKVRNVGK 53


>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HEVQNLEKH 10
HE+ + KH
Sbjct: 164 HEINTVRKH 172


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PHEVQN 6
PHE++N
Sbjct: 7 PHEIEN 12


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 1 PHEVQNLEK 9
P E+++LEK
Sbjct: 144 PEEIKDLEK 152




502|Sequence|2506|2515|NLEKHIEVRK

>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 1 NLEKHIEVRK 10
NL+ H+EVRK
Sbjct: 223 NLDSHLEVRK 232


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 NLEKHIEVR 9
+LEKH+E R
Sbjct: 794 DLEKHVETR 802


>sp|PDXT_METAR|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanocella arvoryzae (strain

Query: 1 NLEKHIEVRK 10
N+E+H+E K
Sbjct: 11 NVEEHVEAMK 20


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LEKHIEVRK 10
LEK +E+RK
Sbjct: 35 LEKKLELRK 43


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 EKHIEVRK 10
E+H++VRK
Sbjct: 122 ERHLDVRK 129


>sp|HIS6_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii (strain

Query: 2 LEKHIEVR 9
LEK IEVR
Sbjct: 241 LEKGIEVR 248


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LEKHIEVRK 10
L+KH+E+ K
Sbjct: 54 LKKHVEIDK 62


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NLEKHIEVRK 10
+LEK IEV K
Sbjct: 403 DLEKRIEVEK 412


>sp|Y730_METJA|UNCHARACTERIZED protein MJ0730|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KHIEVRK 10
KHIEV+K
Sbjct: 178 KHIEVKK 184


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 LEKHIEVR 9
LEK IEVR
Sbjct: 715 LEKAIEVR 722


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 2 LEKHIEVRK 10
EKH EVR+
Sbjct: 478 FEKHPEVRR 486




503|Sequence|2511|2520|IEVRKELAEK

>sp|LEUD2_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 IEVRKELAEK 10
IEVR E AEK
Sbjct: 39 IEVRPEFAEK 48


>sp|GLYA_ARCFU|SERINE hydroxymethyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IEVRKELAEK 10
I RKELAEK
Sbjct: 249 IASRKELAEK 258


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 1 IEVRKELAE 9
IEV +ELAE
Sbjct: 94 IEVDRELAE 102


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 VRKELAEK 10
VR+ELA+K
Sbjct: 208 VREELAQK 215


>sp|RL7A_PYRFU|LARGE ribosomal subunit protein eL8|Pyrococcus furiosus (strain ATCC

Query: 2 EVRKELAEK 10
EV KELAEK
Sbjct: 10 EVPKELAEK 18


>sp|RL7A_PYRHO|LARGE ribosomal subunit protein eL8|Pyrococcus horikoshii (strain ATCC

Query: 2 EVRKELAEK 10
EV KELAEK
Sbjct: 10 EVPKELAEK 18


>sp|RL7A_PYRAB|LARGE ribosomal subunit protein eL8|Pyrococcus abyssi (strain GE5 /

Query: 2 EVRKELAEK 10
EV KELAEK
Sbjct: 10 EVPKELAEK 18


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IEVRKELAEK 10
+++RK+LAEK
Sbjct: 399 LKLRKDLAEK 408


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EVRKELAE 9
EVRK LAE
Sbjct: 167 EVRKGLAE 174


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IEVRKELAEK 10
I +RK LAEK
Sbjct: 78 IRLRKPLAEK 87


>sp|Y818_PYRAE|MEMO1 family protein PAE0818|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IEVRKELAE 9
+EV +ELAE
Sbjct: 108 VEVDRELAE 116


>sp|FNO_METTH|F420-DEPENDENT NADP reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IEVRKELAEK 10
+EV ELAEK
Sbjct: 175 LEVAAELAEK 184


>sp|Y1105_PYRIL|MEMO1 family protein Pisl_1105|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IEVRKELAEK 10
+E+ ELAEK
Sbjct: 108 VEIDGELAEK 117




504|Sequence|2516|2527|ELAEKMRRTSVE

>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 ELAEKMRRT 9
E+AEK+RRT
Sbjct: 470 EVAEKLRRT 478


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ELAEKMRRTSVE 12
ELA K+RR +E
Sbjct: 48 ELAGKLRRAPIE 59


>sp|LEUD2_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 ELAEKMRRTSV 11
E AEK+RR V
Sbjct: 44 EFAEKVRRGDV 54


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ELAEKMRRT 9
E+ EKM+RT
Sbjct: 169 EVVEKMKRT 177


>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 2 LAEKMRRTSVE 12
L+EK+RR ++E
Sbjct: 221 LSEKVRRRAIE 231


>sp|TF2B_PYRWO|TRANSCRIPTION initiation factor IIB|Pyrococcus woesei

Query: 2 LAEKMRRTSVE 12
L+EK+RR ++E
Sbjct: 221 LSEKVRRRAIE 231


>sp|TF2B_PYRFU|TRANSCRIPTION initiation factor IIB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LAEKMRRTSVE 12
L+EK+RR ++E
Sbjct: 221 LSEKVRRRAIE 231


>sp|TF2B_PYRAB|TRANSCRIPTION initiation factor IIB|Pyrococcus abyssi (strain GE5 /

Query: 2 LAEKMRRTSVE 12
L+EK+RR ++E
Sbjct: 221 LSEKVRRRAIE 231


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LAEKMRRTSVE 12
L+EK+RR ++E
Sbjct: 221 LSEKVRRRAIE 231


>sp|CDC61_SACS2|ORC1-TYPE DNA replication protein 1|Saccharolobus solfataricus (strain ATCC

Query: 1 ELAEKMRRTSVE 12
E+AE+M+ T V+
Sbjct: 261 EIAERMKDTKVK 272


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 2 LAEKMRRTSV 11
L +K+RRT+V
Sbjct: 32 LLDKIRRTAV 41


>sp|RNP1_METMA|RIBONUCLEASE P protein component 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ELAEKMRRTSV 11
EL+EK RR+ +
Sbjct: 73 ELSEKGRRSDI 83


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 1 ELAEKMRRTSV 11
ELA K+R ++V
Sbjct: 39 ELANKLRASTV 49


>sp|PYRB_SULTO|ASPARTATE carbamoyltransferase catalytic subunit|Sulfurisphaera tokodaii

Query: 1 ELAEKMRRTS 10
ELA+K+R S
Sbjct: 20 ELADKLRNMS 29


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LAEKMRRTSVE 12
LAEK ++ SVE
Sbjct: 310 LAEKGQKLSVE 320


>sp|Y3997_METAC|UPF0288 protein MA_3997|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LAEKMRRTSVE 12
LAEK ++ SVE
Sbjct: 310 LAEKGQKLSVE 320


>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ELAEKMRRTSV 11
++AEKM+R V
Sbjct: 187 DIAEKMKRKKV 197


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 LAEKMRRTSVE 12
LAE++RR V+
Sbjct: 383 LAEELRRAGVK 393






THE END