1|Sequence|1|10|MQVSKRMLAG
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 MQVSKRMLAG 10
++++KR LAG
Sbjct: 675 IEIAKRYLAG 684
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 MQVSKRMLAG 10
++++KR +AG
Sbjct: 675 IEIAKRYIAG 684
2|Sequence|6|15|RMLAGGVRSM
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 LAGGVRSM 10
LAGG++ +
Sbjct: 3025 LAGGIKEL 3032
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 LAGGVRSM 10
LAGG++ +
Sbjct: 2937 LAGGIKEL 2944
3|Sequence|11|20|GVRSMPSPLL
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 RSMPSPL 9
+S+PSPL
Sbjct: 344 KSVPSPL 350
>sp|C_VSIVS|PROTEIN C'|Vesicular stomatitis Indiana virus (strain
Query: 3 RSMPSPLL 10
+SMPSPL+
Sbjct: 22 KSMPSPLI 29
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 1 GVRSMPSPLL 10
GVR P PL+
Sbjct: 209 GVRQAPPPLM 218
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 1 GVRSMPSPLL 10
GVR P PL+
Sbjct: 210 GVRQAPPPLM 219
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 4 SMPSPL 9
S+PSPL
Sbjct: 337 SVPSPL 342
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 4 SMPSPL 9
S+PSPL
Sbjct: 337 SVPSPL 342
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype
Query: 1 GVRSMPSP 8
GVR P P
Sbjct: 7 GVRVFPKP 14
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 1 GVRSMPSPLL 10
G R +PSPL
Sbjct: 142 GSRVVPSPLF 151
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 VRSMPSPL 9
+RS P P+
Sbjct: 887 IRSFPDPV 894
>sp|UL10_HCMVM|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 MPSPLL 10
+PSPLL
Sbjct: 94 LPSPLL 99
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 1 GVRSMPSPLL 10
G R P PL+
Sbjct: 210 GTRQAPPPLM 219
>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 MPSPLL 10
+PSPLL
Sbjct: 94 LPSPLL 99
4|Sequence|16|25|PSPLLACWQP
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 1 PSPLLAC 7
P PLLAC
Sbjct: 540 PEPLLAC 546
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PLLACWQP 10
PLLAC P
Sbjct: 170 PLLACTDP 177
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 3 PLLACWQP 10
PLLAC P
Sbjct: 140 PLLACTDP 147
>sp|VC18_VACCC|ANKYRIN repeat protein C18/B24|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PSPLLAC 7
P PL AC
Sbjct: 119 PEPLFAC 125
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LLACWQ 9
L++CWQ
Sbjct: 276 LISCWQ 281
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 4 LLACWQ 9
L++CWQ
Sbjct: 276 LISCWQ 281
>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PLLACWQ 9
P LACW+
Sbjct: 102 PTLACWE 108
>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 PLLACWQ 9
P LACW+
Sbjct: 102 PTLACWE 108
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 PSPLLACWQP 10
P+ ACW P
Sbjct: 77 PAEARACWHP 86
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 3 PLLACW 8
P+L+CW
Sbjct: 319 PILSCW 324
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 SPLLACWQ 9
PLL CW
Sbjct: 211 KPLLDCWD 218
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 3 PLLACW 8
P+L+CW
Sbjct: 319 PILSCW 324
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 SPLLACW 8
P+L+CW
Sbjct: 318 GPVLSCW 324
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 SPLLACW 8
P+L+CW
Sbjct: 318 GPVLSCW 324
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 SPLLACW 8
P+L+CW
Sbjct: 318 GPVLSCW 324
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|VE6_HPV35|PROTEIN E6|Human papillomavirus 35
Query: 5 LACWQP 10
++CW+P
Sbjct: 137 MSCWKP 142
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 1 PSPLLAC 7
P PL AC
Sbjct: 212 PGPLYAC 218
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 833 SPLHVAWRP 841
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 4 LLACWQ 9
+L CW+
Sbjct: 748 ILKCWE 753
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 833 SPLHVAWRP 841
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 833 SPLHVAWRP 841
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 833 SPLHVAWRP 841
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 833 SPLHVAWRP 841
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 LLACWQ 9
+L CW+
Sbjct: 1071 ILKCWE 1076
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 823 SPLHVAWRP 831
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 823 SPLHVAWRP 831
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 823 SPLHVAWRP 831
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 829 SPLHVAWRP 837
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWKP 842
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 836 SPLHVAWRP 844
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWKP 842
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 836 SPLHVAWRP 844
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 823 SPLHVAWRP 831
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 829 SPLHVAWRP 837
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 836 SPLHVAWRP 844
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 836 SPLHVAWRP 844
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 829 SPLHVAWRP 837
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 823 SPLHVAWRP 831
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 836 SPLHVAWRP 844
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 834 SPLHVAWRP 842
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 836 SPLHVAWRP 844
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 823 SPLHVAWRP 831
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 833 SPLHVTWKP 841
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 2 SPLLACWQP 10
SPL W+P
Sbjct: 833 SPLHVTWKP 841
5|Sequence|21|30|ACWQPILLLV
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 ACWQPIL 7
ACW P+L
Sbjct: 82 ACWHPLL 88
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 1 ACWQPILL 8
AC QPILL
Sbjct: 119 ACRQPILL 126
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 1 ACWQPILL 8
AC QPILL
Sbjct: 119 ACRQPILL 126
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 CWQPIL 7
CW+P+L
Sbjct: 83 CWRPLL 88
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 QPILLL 9
QPILLL
Sbjct: 2567 QPILLL 2572
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 QPILLL 9
QPILLL
Sbjct: 2544 QPILLL 2549
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 QPILLL 9
QPILLL
Sbjct: 2567 QPILLL 2572
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 QPILLL 9
QPILLL
Sbjct: 2544 QPILLL 2549
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 ACWQPILLLV 10
CW +LLL+
Sbjct: 796 GCWSFVLLLM 805
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 3 WQPIL 7
WQP++
Sbjct: 374 WQPLI 378
>sp|PG141_VAR67|VIRION membrane protein OPG141|Variola virus (isolate
Query: 3 WQPILLLV 10
++P+LLLV
Sbjct: 5 YEPLLLLV 12
>sp|PG141_VACCC|VIRION membrane protein OPG141|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 WQPILLLV 10
++P+LLLV
Sbjct: 5 YEPLLLLV 12
>sp|PG141_MONPV|VIRION membrane protein OPG141|Monkeypox virus (MPXV)
Query: 3 WQPILLLV 10
++P+LLLV
Sbjct: 5 YEPLLLLV 12
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 WQPILL 8
W P+LL
Sbjct: 1318 WLPVLL 1323
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 WQPILL 8
W P+LL
Sbjct: 1317 WLPVLL 1322
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 WQPILL 8
W P+LL
Sbjct: 1318 WLPVLL 1323
6|Sequence|26|35|ILLLVLGSVL
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 ILLLVLGSVL 10
I L VLGS+L
Sbjct: 860 ICLFVLGSIL 869
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 ILLLVLGSVL 10
I LLVL S+L
Sbjct: 634 IFLLVLESIL 643
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 ILLLVLGSVL 10
I LLVL S+L
Sbjct: 634 IFLLVLESIL 643
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 ILLLVLGSVL 10
I LLVL S+L
Sbjct: 634 IFLLVLESIL 643
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 LLLVLGSVL 10
LLL +G+VL
Sbjct: 1243 LLLSIGAVL 1251
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 ILLLVLGSVL 10
+LL +L SVL
Sbjct: 3 VLLTILTSVL 12
7|Sequence|31|40|LGSVLSGSAT
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GSVLSGSAT 10
GSVLSG T
Sbjct: 5 GSVLSGKKT 13
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GSVLSGSAT 10
GSVLSG T
Sbjct: 5 GSVLSGKKT 13
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 GSVLSGSAT 10
GSVLSG T
Sbjct: 5 GSVLSGKKT 13
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 GSVLSGSAT 10
GSVLSG T
Sbjct: 5 GSVLSGKKT 13
>sp|ALT2B_EMCVR|PROTEIN 2B*|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 GSVLSGS 8
GSV++GS
Sbjct: 17 GSVINGS 23
>sp|ALT2B_EMCV|PROTEIN 2B*|Encephalomyocarditis virus
Query: 2 GSVLSGS 8
GSV++GS
Sbjct: 17 GSVINGS 23
8|Sequence|36|45|SGSATGCPPR
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 SGSATGCPP 9
+GSA+GC P
Sbjct: 1937 TGSASGCDP 1945
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1896 TGSAVGCDP 1904
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1903 TGSAVGCDP 1911
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1935 TGSAVGCDP 1943
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1903 TGSAVGCDP 1911
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1939 TGSAVGCDP 1947
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1927 TGSAVGCDP 1935
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1928 TGSAVGCDP 1936
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1945 TGSAVGCDP 1953
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1951 TGSAVGCDP 1959
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1954 TGSAVGCDP 1962
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1954 TGSAVGCDP 1962
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1947 TGSAVGCDP 1955
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1927 TGSAVGCDP 1935
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1931 TGSAVGCDP 1939
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1951 TGSAVGCDP 1959
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1938 TGSAVGCDP 1946
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1940 TGSAVGCDP 1948
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1926 TGSAVGCDP 1934
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1959 TGSAVGCDP 1967
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1925 TGSAVGCDP 1933
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1939 TGSAVGCDP 1947
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1937 TGSAVGCDP 1945
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1928 TGSAVGCDP 1936
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1951 TGSAVGCDP 1959
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1952 TGSAVGCDP 1960
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1952 TGSAVGCDP 1960
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1910 TGSAVGCDP 1918
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1929 TGSAVGCDP 1937
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1929 TGSAVGCDP 1937
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1929 TGSAVGCDP 1937
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1899 TGSAVGCNP 1907
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1870 TGSAIGCDP 1878
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 SGSATGCPPR 10
+ + T CPPR
Sbjct: 280 AANGTCCPPR 289
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 SGSATGCPPR 10
+ + +GCPPR
Sbjct: 710 ADALSGCPPR 719
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 SGSATGCPPR 10
+ + +GCPPR
Sbjct: 726 ADALSGCPPR 735
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 SATGCPPR 10
+ATGCP R
Sbjct: 447 NATGCPER 454
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1937 TGSAVGCNP 1945
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1937 TGSAVGCNP 1945
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1937 TGSAVGCNP 1945
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1937 TGSAVGCNP 1945
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 2 GSATGCPP 9
GSA GC P
Sbjct: 2039 GSAIGCDP 2046
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 SGSATGCPP 9
+GSA GC P
Sbjct: 1937 TGSAVGCNP 1945
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 GSATGCPP 9
GSA GC P
Sbjct: 2040 GSAIGCDP 2047
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 GSATGCPP 9
GSA GC P
Sbjct: 2037 GSAIGCDP 2044
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 GSATGCPP 9
GSA GC P
Sbjct: 2039 GSAIGCDP 2046
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 GSATGCPP 9
GSA GC P
Sbjct: 2039 GSAIGCDP 2046
>sp|DR3_HHV6Z|UNCHARACTERIZED protein DR3|Human herpesvirus 6B (strain Z29)
Query: 2 GSATGCP 8
G+ATGCP
Sbjct: 157 GNATGCP 163
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 6 GCPP 9
GCPP
Sbjct: 1263 GCPP 1266
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 6 GCPP 9
GCPP
Sbjct: 1286 GCPP 1289
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 6 GCPP 9
GCPP
Sbjct: 1286 GCPP 1289
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 SGSATGCPP 9
+ +AT CPP
Sbjct: 205 NAAATDCPP 213
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 6 GCPP 9
GCPP
Sbjct: 263 GCPP 266
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 6 GCPP 9
GCPP
Sbjct: 263 GCPP 266
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 6 GCPP 9
GCPP
Sbjct: 263 GCPP 266
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 GSATGCPP 9
GSA GC P
Sbjct: 2171 GSAVGCNP 2178
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GSATGCPP 9
G+A G PP
Sbjct: 459 GAANGMPP 466
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 GSATGCPP 9
G+A G PP
Sbjct: 459 GAANGMPP 466
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 GSATGCPP 9
GSA GC P
Sbjct: 2104 GSAVGCNP 2111
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 SATGCPPR 10
++TGCP R
Sbjct: 447 NSTGCPER 454
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 GSATGCPP 9
GSA GC P
Sbjct: 2100 GSAVGCNP 2107
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 SATGCPPR 10
++TGCP R
Sbjct: 448 NSTGCPER 455
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 SATGCPPR 10
++TGCP R
Sbjct: 448 NSTGCPQR 455
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 SATGCPPR 10
++TGCP R
Sbjct: 448 NSTGCPQR 455
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SATGCPPR 10
+A+GCP R
Sbjct: 448 NASGCPER 455
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SATGCPPR 10
+A+GCP R
Sbjct: 448 NASGCPER 455
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 SATGCPPR 10
++TGCP R
Sbjct: 448 NSTGCPQR 455
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 SATGCPPR 10
+A+GCP R
Sbjct: 448 NASGCPER 455
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 SATGCPPR 10
S TG PPR
Sbjct: 312 SVTGEPPR 319
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 1 SGSATGCPP 9
+ S T CPP
Sbjct: 352 AASVTSCPP 360
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 3 SATGCPPR 10
+A+GCP R
Sbjct: 448 NASGCPER 455
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 4 ATGCPPR 10
AT C PR
Sbjct: 245 ATACEPR 251
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 SGSATGCPP 9
SG+ CPP
Sbjct: 208 SGNPGDCPP 216
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ATGCP 8
ATGCP
Sbjct: 401 ATGCP 405
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ATGCP 8
ATGCP
Sbjct: 401 ATGCP 405
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SGSATGCPP 9
SGS T C P
Sbjct: 451 SGSDTICTP 459
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SGSATGCPP 9
SGS T C P
Sbjct: 451 SGSDTICTP 459
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 SATGCP 8
+ TGCP
Sbjct: 351 NTTGCP 356
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 SATGCP 8
+ TGCP
Sbjct: 351 NTTGCP 356
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 SATGCP 8
+ TGCP
Sbjct: 351 NTTGCP 356
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SGSATGCPPR 10
S +++GCP R
Sbjct: 446 SFNSSGCPER 455
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 SATGCP 8
+ TGCP
Sbjct: 351 NTTGCP 356
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 SATGCP 8
+ TGCP
Sbjct: 351 NTTGCP 356
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 SGSATGCPPR 10
S +++GCP R
Sbjct: 446 SFNSSGCPER 455
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 SGSATGCPPR 10
S +++GCP R
Sbjct: 446 SFNSSGCPER 455
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 SATGCP 8
+ TGCP
Sbjct: 351 NTTGCP 356
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 SATGCP 8
+ TGCP
Sbjct: 351 NTTGCP 356
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 5 TGCPPR 10
+GCPP
Sbjct: 658 SGCPPH 663
9|Sequence|41|50|GCPPRCECSA
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCEC A
Sbjct: 131 PRCECQA 137
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 CPPRCECSA 10
CPPR C+A
Sbjct: 679 CPPRDSCAA 687
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 2 CPPRC 6
CPP C
Sbjct: 315 CPPTC 319
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 2 CPPRC 6
CPP C
Sbjct: 315 CPPTC 319
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 2 CPPRC 6
CPP C
Sbjct: 319 CPPTC 323
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 2 CPPRC 6
CPP C
Sbjct: 319 CPPTC 323
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 2 CPPRC 6
CPP C
Sbjct: 319 CPPTC 323
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 CPPRC 6
CPP C
Sbjct: 319 CPPTC 323
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 2 CPPRC 6
CPP C
Sbjct: 319 CPPTC 323
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 2 CPPRC 6
CPP C
Sbjct: 276 CPPTC 280
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 2 CPPRC 6
CPP C
Sbjct: 315 CPPTC 319
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 2 CPPRC 6
CPP C
Sbjct: 315 CPPTC 319
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 PPRCECSA 10
PP CE A
Sbjct: 3163 PPECELEA 3170
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 CPPRCEC 8
CP RC C
Sbjct: 1027 CPHRCGC 1033
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CPPRCECSA 10
CPP C SA
Sbjct: 21 CPPSCSFSA 29
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 1 GCPPRCECSA 10
G PPR +C A
Sbjct: 246 GPPPRSDCVA 255
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PPRCEC 8
PP C C
Sbjct: 628 PPYCRC 633
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPRCEC 8
PP C C
Sbjct: 628 PPYCRC 633
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 3 PPRCEC 8
P RCEC
Sbjct: 340 PLRCEC 345
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPRCEC 8
PP C C
Sbjct: 628 PPYCRC 633
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYQA 137
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 CPPRCECSA 10
CP RC C++
Sbjct: 1169 CPERCGCTS 1177
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 PRCECSA 10
P C+C+A
Sbjct: 895 PCCDCTA 901
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYPA 137
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PRCECSA 10
PRCE A
Sbjct: 131 PRCEYPA 137
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 5 RCECSA 10
RC C+A
Sbjct: 932 RCNCNA 937
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 5 RCECSA 10
RC C+A
Sbjct: 935 RCNCNA 940
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 GCPPRCECS 9
GCP CS
Sbjct: 1176 GCPEGTVCS 1184
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 5 RCECSA 10
RC C+A
Sbjct: 935 RCNCNA 940
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 5 RCECS 9
RC CS
Sbjct: 123 RCRCS 127
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 RCECS 9
RC CS
Sbjct: 123 RCRCS 127
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 4 PRCECSA 10
P C C+A
Sbjct: 529 PNCVCTA 535
>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 CPPRC 6
C PRC
Sbjct: 142 CEPRC 146
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 2 CPPRCECSA 10
P RCEC++
Sbjct: 392 MPLRCECNS 400
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 PRCECSA 10
P C C++
Sbjct: 908 PHCNCTS 914
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 2 CPPRCECSA 10
P RCEC++
Sbjct: 392 MPLRCECNS 400
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 PRCECS 9
P C+C+
Sbjct: 900 PSCDCT 905
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 5 RCECS 9
RC CS
Sbjct: 932 RCNCS 936
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 PRCECS 9
P C+C+
Sbjct: 916 PNCDCT 921
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 GCPPRCECS 9
GCP CS
Sbjct: 1175 GCPEGTVCS 1183
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 4 PRCECSA 10
P C C++
Sbjct: 909 PHCNCTS 915
>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 2 CPPRC 6
C PRC
Sbjct: 142 CEPRC 146
>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CPPRC 6
C PRC
Sbjct: 142 CEPRC 146
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 5 RCECSA 10
RC+C++
Sbjct: 908 RCQCTS 913
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 5 RCECSA 10
RC+C++
Sbjct: 904 RCQCTS 909
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 5 RCECS 9
RC CS
Sbjct: 916 RCRCS 920
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CPPRCECSA 10
CP CSA
Sbjct: 3284 CPRHVICSA 3292
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CPPRCECSA 10
CP CSA
Sbjct: 3284 CPRHVICSA 3292
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CPPRCE 7
CP CE
Sbjct: 389 CPVECE 394
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 5 RCECS 9
RC CS
Sbjct: 906 RCRCS 910
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 2 CPPRCEC 8
P RCEC
Sbjct: 347 MPVRCEC 353
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 3 PPRCECSA 10
PPRC A
Sbjct: 322 PPRCSAEA 329
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 3 PPRCECSA 10
PPRC A
Sbjct: 320 PPRCSAEA 327
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 CPPRCEC 8
CPP EC
Sbjct: 804 CPPNREC 810
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 CPPRCEC 8
CPP EC
Sbjct: 804 CPPNREC 810
>sp|ORF5_MERS1|NON-STRUCTURAL protein ORF5|Middle East respiratory syndrome-related coronavirus
Query: 5 RCECS 9
RC CS
Sbjct: 160 RCSCS 164
10|Sequence|46|55|CECSAQDRAV
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 3 CSAQDRAV 10
CSA DRA+
Sbjct: 444 CSAADRAL 451
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 3 CSAQDRAV 10
CSA DRA+
Sbjct: 434 CSAPDRAL 441
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 1 CECSAQDRAV 10
C+C RA+
Sbjct: 392 CQCQTTGRAI 401
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 CECSAQDRAV 10
C+C RA+
Sbjct: 392 CQCQTTGRAI 401
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 ECSAQDRA 9
EC Q+RA
Sbjct: 933 ECPTQNRA 940
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 ECSAQDRA 9
EC Q+RA
Sbjct: 933 ECPTQNRA 940
>sp|VU84_HHV6U|PROTEIN U84|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ECSAQDR 8
EC QDR
Sbjct: 144 ECQRQDR 150
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 CECSAQDRAV 10
CE S DR V
Sbjct: 166 CELSMSDRYV 175
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CECSAQDRAV 10
CE S DR V
Sbjct: 166 CELSMSDRYV 175
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 ECSAQDRA 9
EC DRA
Sbjct: 928 ECPTSDRA 935
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 ECSAQD 7
EC AQD
Sbjct: 1322 ECHAQD 1327
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 ECSAQD 7
EC AQD
Sbjct: 1325 ECHAQD 1330
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 ECSAQDRA 9
EC DRA
Sbjct: 75 ECGYSDRA 82
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 ECSAQD 7
EC AQD
Sbjct: 1323 ECHAQD 1328
11|Sequence|51|60|QDRAVLCHRK
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 4 AVLCHRK 10
A LCHR+
Sbjct: 297 AALCHRE 303
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 AVLCHRK 10
A LCHR+
Sbjct: 297 AALCHRE 303
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 AVLCHRK 10
A LCHR+
Sbjct: 297 AALCHRE 303
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 AVLCHRK 10
AVLC RK
Sbjct: 2905 AVLCRRK 2911
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QDRAVLCHRK 10
+D+A L HR+
Sbjct: 202 EDKAWLVHRQ 211
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QDRAVLCHRK 10
+D+A L HR+
Sbjct: 482 EDKAWLVHRQ 491
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QDRAVLCHRK 10
+D+A L HR+
Sbjct: 482 EDKAWLVHRQ 491
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QDRAVLCHRK 10
+D+A L HR+
Sbjct: 482 EDKAWLVHRQ 491
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 QDRAVLCHRK 10
+D+A L HR+
Sbjct: 202 EDKAWLVHRQ 211
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QDRAVLCHRK 10
+D+A L HR+
Sbjct: 482 KDKAWLVHRQ 491
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 QDRAVLCHR 9
Q RA+ C +
Sbjct: 422 QSRAITCQK 430
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 1 QDRAVLCHR 9
Q RA+ C +
Sbjct: 423 QSRAITCQK 431
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 5 VLCHR 9
+LCHR
Sbjct: 542 ILCHR 546
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 5 VLCHRK 10
+LC+RK
Sbjct: 403 ILCYRK 408
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 5 VLCHRK 10
+LC+RK
Sbjct: 403 ILCYRK 408
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 QDRAVLCHRK 10
+D+A+ C R+
Sbjct: 477 KDKAISCPRQ 486
>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 91 DRAVKLYRK 99
>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|E1A_ADE04|EARLY E1A protein|Human adenovirus E serotype 4
Query: 2 DRAVLC 7
D+AVLC
Sbjct: 170 DKAVLC 175
>sp|M1_I68A6|MATRIX protein 1|Influenza A virus (strain A/Northern
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I57A5|MATRIX protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I50A0|MATRIX protein 1|Influenza A virus (strain A/Fort
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 1 QDRAVLCHR 9
QD+ V HR
Sbjct: 96 QDKTVTLHR 104
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 1 QDRAVLCHR 9
QD+ V HR
Sbjct: 96 QDKTVTLHR 104
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QDRAVLCHR 9
QD+ V HR
Sbjct: 96 QDKTVTLHR 104
>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 2 DRAVLCHRK 10
DRAV +RK
Sbjct: 94 DRAVKLYRK 102
12|Sequence|56|65|LCHRKRFVAV
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LCHRKRFVA 9
LCH K F+A
Sbjct: 141 LCHTKNFIA 149
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LCHRKRFVA 9
LCH K F+A
Sbjct: 141 LCHTKNFIA 149
>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LCHRKRF 7
+CHR RF
Sbjct: 223 VCHRVRF 229
>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LCHRKRF 7
+CHR RF
Sbjct: 223 VCHRVRF 229
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 CHRKRFVAV 10
CHR+R V
Sbjct: 186 CHRRRHTPV 194
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 CHRKRFVAV 10
CHR+R V
Sbjct: 186 CHRRRHTPV 194
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 CHRKRFVAV 10
CHR+R V
Sbjct: 186 CHRRRHTPV 194
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 LCHRKRFVA 9
LC R+ F+A
Sbjct: 2907 LCTREEFIA 2915
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 LCHRKRFVA 9
LC R+ F+A
Sbjct: 2907 LCTREEFIA 2915
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LCHRKRFVA 9
+C R+ F+A
Sbjct: 2905 MCSREEFIA 2913
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 LCHRKRFVA 9
+C R+ F+A
Sbjct: 2903 MCSREEFIA 2911
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LCHRKRFVA 9
+C R+ F+A
Sbjct: 2905 MCSREEFIA 2913
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 LCHRKRFVA 9
+C R+ F+A
Sbjct: 2905 MCSREEFIA 2913
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LCHRKRFVA 9
+C R+ F+A
Sbjct: 2905 MCSREEFIA 2913
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 LCHRKRFVA 9
+C R+ F+A
Sbjct: 2905 MCSREEFIA 2913
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 LCHRKRFVA 9
+C R+ F+A
Sbjct: 2905 MCSREEFIA 2913
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 LCHRKRFVA 9
+C R+ FVA
Sbjct: 2893 ICTREEFVA 2901
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 LCHRKRFVA 9
+C R+ F+A
Sbjct: 2913 MCTREEFIA 2921
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 LCHRKRFVA 9
LC ++ F+A
Sbjct: 2901 LCTKEEFIA 2909
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 LCHRKRFVA 9
LC ++ F+A
Sbjct: 2900 LCTKEEFIA 2908
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 LCHRKRFVA 9
LC ++ F+A
Sbjct: 2901 LCTKEEFIA 2909
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LCHRKRFVA 9
LC ++ F+A
Sbjct: 2900 LCTKEEFIA 2908
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 LCHRKRFVA 9
LC ++ F+A
Sbjct: 2900 LCTKEEFIA 2908
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 LCHRKRFVA 9
LC ++ F+A
Sbjct: 2901 LCTKEEFIA 2909
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LCHRKRFVA 9
LC ++ F+A
Sbjct: 2900 LCTKEEFIA 2908
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 LCHRKRFVA 9
LC ++ F+A
Sbjct: 2900 LCTKEEFIA 2908
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 LCHRKRFVA 9
LC ++ F+A
Sbjct: 2900 LCTKEEFIA 2908
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LCHRKRFVAV 10
L H K+FV V
Sbjct: 19 LIHCKQFVTV 28
13|Sequence|61|70|RFVAVPEGIP
>sp|PG038_VARV|EARLY protein OPG038|Variola virus
Query: 1 RFVAVPEGI 9
RFVA EG+
Sbjct: 88 RFVAAAEGV 96
>sp|PG038_VAR67|EARLY protein OPG038|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 RFVAVPEGI 9
RFVA EG+
Sbjct: 88 RFVAAAEGV 96
>sp|PG038_VACCC|EARLY protein OPG038|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RFVAVPEGI 9
RFVA EG+
Sbjct: 88 RFVAAAEGV 96
>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)
Query: 1 RFVAVPEGI 9
RFVA EG+
Sbjct: 88 RFVAAAEGV 96
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 RFVAVPEGI 9
+FV VP GI
Sbjct: 4327 KFVQVPVGI 4335
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 RFVAVPEGI 9
+FV VP GI
Sbjct: 4327 KFVQVPVGI 4335
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 FVAVPEG 8
FVA PEG
Sbjct: 5709 FVAQPEG 5715
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 2 FVAVPEGIP 10
++A P GIP
Sbjct: 716 YLAAPTGIP 724
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 RFVAVPEGIP 10
+ +AVP G P
Sbjct: 1566 QLIAVPPGKP 1575
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RFVAVPEGIP 10
R + +P+G P
Sbjct: 534 RSIVIPQGTP 543
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RFVAVPEGIP 10
R + +P+G P
Sbjct: 534 RSIVIPQGTP 543
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 AVPEGI 9
AVPEG+
Sbjct: 95 AVPEGL 100
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 5 VPEGIP 10
VP+G+P
Sbjct: 329 VPQGLP 334
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 3 VAVPEGIP 10
V VP+G P
Sbjct: 607 VKVPKGAP 614
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 5 VPEGIP 10
VP+G+P
Sbjct: 329 VPQGLP 334
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 VAVPEGIP 10
V VP+G P
Sbjct: 607 VKVPKGAP 614
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 VAVPEGIP 10
V VP+G P
Sbjct: 607 VKVPKGAP 614
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 VAVPEGIP 10
V VP+G P
Sbjct: 607 VKVPKGAP 614
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 VAVPEGIP 10
V VP+G P
Sbjct: 607 VKVPKGAP 614
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 VAVPEGIP 10
V VP+G P
Sbjct: 607 VKVPKGAP 614
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 VAVPEGIP 10
V VP+G P
Sbjct: 607 VKVPKGAP 614
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 VAVPEGIP 10
V VP+G P
Sbjct: 607 VKVPKGAP 614
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 VAVPEGIP 10
V VP+G P
Sbjct: 607 VKVPKGAP 614
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 3 VAVPEG 8
VAVP+G
Sbjct: 242 VAVPDG 247
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 PEGIP 10
PEG+P
Sbjct: 195 PEGVP 199
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 PEGIP 10
PEG+P
Sbjct: 195 PEGVP 199
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 PEGIP 10
PEG+P
Sbjct: 195 PEGVP 199
14|Sequence|66|75|PEGIPTETRL
>sp|U23_HHV6Z|PROTEIN U23|Human herpesvirus 6B (strain Z29)
Query: 1 PEGIPTET 8
P+G+PT++
Sbjct: 202 PQGLPTKS 209
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 1 PEGIPTETRL 10
P G+PT+ L
Sbjct: 15 PPGVPTDEML 24
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 1 PEGIPTETRL 10
P G+PT+ L
Sbjct: 15 PPGVPTDEML 24
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 1 PEGIPTETRL 10
P G+PT+ L
Sbjct: 15 PPGVPTDEML 24
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PEGIPTETRL 10
P G+PT+ L
Sbjct: 15 PPGVPTDEML 24
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 PEGIPTET 8
P+G+PT T
Sbjct: 330 PQGLPTTT 337
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PEGIPTETRL 10
P G+PT+ L
Sbjct: 15 PPGVPTDEML 24
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 1 PEGIPTETRL 10
P G+PT+ L
Sbjct: 15 PPGVPTDEML 24
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 PEGIPTET 8
P+G+PT T
Sbjct: 330 PQGLPTTT 337
>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38
Query: 1 PEGIPTETRL 10
PEG+ TET +
Sbjct: 411 PEGVLTETSM 420
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 4 IPTETRL 10
+PT+TRL
Sbjct: 2154 LPTQTRL 2160
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 4 IPTETRL 10
+PT+TRL
Sbjct: 2154 LPTQTRL 2160
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 4 IPTETRL 10
+PT+TRL
Sbjct: 2154 LPTQTRL 2160
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 EGIPTETRL 10
+G+P +TR+
Sbjct: 2018 DGLPKDTRI 2026
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 EGIPTETRL 10
+G+P +TR+
Sbjct: 2018 DGLPKDTRI 2026
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 EGIPTETRL 10
+G+P +TR+
Sbjct: 2018 DGLPKDTRI 2026
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 EGIPTETRL 10
+G+P +TR+
Sbjct: 2018 DGLPKDTRI 2026
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 PEGIPTE 7
P GIP+E
Sbjct: 207 PSGIPSE 213
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 EGIPTETRL 10
+G P ETR+
Sbjct: 689 DGEPAETRV 697
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 2 EGIPTETRL 10
+G P ETR+
Sbjct: 689 DGEPAETRV 697
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 EGIPTETRL 10
+G P ETR+
Sbjct: 689 DGEPAETRV 697
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 EGIPTETRL 10
+G P ETR+
Sbjct: 689 DGEPAETRV 697
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 EGIPTETRL 10
+G P ETR+
Sbjct: 689 DGEPAETRV 697
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 PEGIPTETR 9
P G PT TR
Sbjct: 793 PSGPPTSTR 801
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 EGIPTETR 9
+GIPTE +
Sbjct: 323 QGIPTELK 330
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 EGIPTETRL 10
+G+P +TR+
Sbjct: 2018 DGLPKDTRI 2026
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 EGIPTETR 9
+GIPTE +
Sbjct: 323 QGIPTELK 330
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 PEGIPT 6
PE IPT
Sbjct: 236 PESIPT 241
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 2 EGIPTET 8
+GIPT T
Sbjct: 111 DGIPTAT 117
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 2 EGIPTET 8
+GIPT T
Sbjct: 111 DGIPTAT 117
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 1 PEGIPTETRL 10
P G PT T L
Sbjct: 147 PTGSPTHTHL 156
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 1 PEGIPTET 8
P G PT T
Sbjct: 247 PRGPPTNT 254
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GIPTET 8
G+PT+T
Sbjct: 5851 GLPTQT 5856
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GIPTET 8
G+PT+T
Sbjct: 5828 GLPTQT 5833
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 1 PEGIPT 6
P GIPT
Sbjct: 118 PTGIPT 123
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 2 EGIPTETR 9
EGIPT+ +
Sbjct: 225 EGIPTDQQ 232
15|Sequence|71|80|TETRLLDLGK
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 3 TRLLDLG 9
+RLLDLG
Sbjct: 42 SRLLDLG 48
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 2 ETRLLDLGK 10
E RLL LGK
Sbjct: 411 EGRLLKLGK 419
16|Sequence|76|85|LDLGKNRIKT
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 805 LEVGKQRLK 813
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 805 LEVGKQRLK 813
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 309 LEVGKQRLK 317
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 805 LEVGKQRLK 813
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 805 LEVGKQRLK 813
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 805 LEVGKQRLK 813
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 799 LEVGKQRLK 807
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 805 LEVGKQRLK 813
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 805 LEVGKQRLK 813
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 784 LEVGKQRLK 792
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 805 LEVGKQRLK 813
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 805 LEVGKQRLK 813
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LDLGKNRIK 9
L++GK R+K
Sbjct: 805 LEVGKQRLK 813
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 1 LDLGKNRIKT 10
D KN IKT
Sbjct: 308 FDYNKNAIKT 317
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 LDLGKNRIKT 10
D KN IKT
Sbjct: 319 FDYNKNAIKT 328
17|Sequence|81|90|NRIKTLNQDE
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 NRIKTLNQD 9
NR++TL QD
Sbjct: 213 NRVETLRQD 221
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NRIKTLNQD 9
NR++TL QD
Sbjct: 213 NRVETLRQD 221
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 NRIKTLNQD 9
NR++TL QD
Sbjct: 213 NRVETLRQD 221
>sp|PG036_VACCC|PROTEIN OPG036|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NRIKTLNQDE 10
NR T+N+DE
Sbjct: 58 NRFLTMNKDE 67
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 3 IKTLNQDE 10
IKT N+DE
Sbjct: 218 IKTANEDE 225
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 IKTLNQDE 10
IKT N+DE
Sbjct: 217 IKTANEDE 224
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 1 NRIKTLN 7
NRI+TLN
Sbjct: 333 NRIQTLN 339
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 NRIKTLN 7
NRI+TLN
Sbjct: 333 NRIQTLN 339
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 NRIKTLN 7
NRI+TLN
Sbjct: 333 NRIQTLN 339
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NRIKTLN 7
NRI+TLN
Sbjct: 333 NRIQTLN 339
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 1 NRIKTLN 7
NRI+TLN
Sbjct: 333 NRIQTLN 339
18|Sequence|86|95|LNQDEFASFP
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 LNQDEFASF 9
LN DEF+ +
Sbjct: 207 LNDDEFSCY 215
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LNQDEFASF 9
LN DEF+ +
Sbjct: 207 LNDDEFSCY 215
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 1 LNQDEFASF 9
LN DEF+ +
Sbjct: 206 LNDDEFSCY 214
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 5 EFASFP 10
EF SFP
Sbjct: 444 EFTSFP 449
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 3 QDEFASF 9
+DEFA+F
Sbjct: 294 KDEFANF 300
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 NQDEFASFP 10
N+D F+ FP
Sbjct: 90 NEDLFSCFP 98
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 3 QDEFASF 9
+DEFA+F
Sbjct: 294 KDEFANF 300
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 NQDEFASFP 10
N+D F+ FP
Sbjct: 90 NEDLFSCFP 98
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 2 NQDEFASFP 10
N+D F+ FP
Sbjct: 83 NEDLFSGFP 91
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 2 NQDEFASFP 10
N+D F+ FP
Sbjct: 83 NEDLFSGFP 91
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LNQDEFASFP 10
LN D + S P
Sbjct: 2992 LNNDYYRSLP 3001
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 LNQDEFASFP 10
LN D + S P
Sbjct: 3006 LNNDYYRSLP 3015
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LNQDEFASFP 10
LN D + S P
Sbjct: 2992 LNNDYYRSLP 3001
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LNQDEFASFP 10
LN D + S P
Sbjct: 3006 LNNDYYRSLP 3015
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NQDEFASFP 10
N D+F FP
Sbjct: 293 NADKFFIFP 301
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 NQDEFASFP 10
N D+F FP
Sbjct: 293 NADKFFIFP 301
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NQDEFASFP 10
N D+F FP
Sbjct: 293 NADKFFIFP 301
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LNQDEFASFP 10
LN D + S P
Sbjct: 3030 LNNDYYRSMP 3039
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LNQDEFASFP 10
LN D + S P
Sbjct: 3050 LNNDYYRSMP 3059
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LNQDEFASFP 10
LN D + S P
Sbjct: 3030 LNNDYYRSMP 3039
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LNQDEFASFP 10
LN D + S P
Sbjct: 3050 LNNDYYRSMP 3059
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LNQDEFASFP 10
LN D + S P
Sbjct: 3080 LNNDYYRSMP 3089
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LNQDEFASFP 10
LN D + S P
Sbjct: 3080 LNNDYYRSMP 3089
19|Sequence|91|100|FASFPHLEEL
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 FPHLEE 9
FPH EE
Sbjct: 311 FPHFEE 316
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 FPHLEE 9
FPH EE
Sbjct: 311 FPHFEE 316
>sp|PG121_VAR67|MRNA-DECAPPING protein OPG121|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 PHLEEL 10
PH EEL
Sbjct: 101 PHFEEL 106
>sp|PG121_VACCC|MRNA-DECAPPING protein OPG121|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PHLEEL 10
PH EEL
Sbjct: 101 PHFEEL 106
>sp|D9_VARV|MRNA-DECAPPING protein D9|Variola virus
Query: 5 PHLEEL 10
PH EEL
Sbjct: 101 PHFEEL 106
>sp|PG121_MONPV|MRNA-DECAPPING protein OPG121|Monkeypox virus (MPXV)
Query: 5 PHLEEL 10
PH EEL
Sbjct: 101 PHFEEL 106
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 3 SFPHLEE 9
+FPHL++
Sbjct: 487 AFPHLKQ 493
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 4 FPHLEEL 10
FP++EEL
Sbjct: 1477 FPNIEEL 1483
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ASFPHL 7
A FPHL
Sbjct: 282 APFPHL 287
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ASFPHL 7
A FPHL
Sbjct: 282 APFPHL 287
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 4 FPHLEEL 10
FP++EEL
Sbjct: 1477 FPNIEEL 1483
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 FPHLEE 9
FPHL+E
Sbjct: 618 FPHLKE 623
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PHLEEL 10
PHLEE+
Sbjct: 545 PHLEEV 550
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PHLEEL 10
PHLEE+
Sbjct: 545 PHLEEV 550
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PHLEEL 10
PHLEE+
Sbjct: 545 PHLEEV 550
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 4 FPHLEE 9
FPHL E
Sbjct: 582 FPHLSE 587
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 1 FASFPHLEEL 10
+AS P+LE +
Sbjct: 367 YASIPNLEAI 376
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FASFPH 6
FAS PH
Sbjct: 321 FASAPH 326
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SFPHLE 8
+FPHL+
Sbjct: 64 AFPHLK 69
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SFPHLE 8
+FPHL+
Sbjct: 64 AFPHLK 69
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FASFPH 6
FAS PH
Sbjct: 321 FASAPH 326
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 4 FPHLE 8
FPH+E
Sbjct: 60 FPHVE 64
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ASFPHLE 8
+ FPHL+
Sbjct: 848 SQFPHLQ 854
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FASFPH 6
FAS PH
Sbjct: 321 FASAPH 326
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ASFPHLE 8
+ FPHL+
Sbjct: 865 SQFPHLQ 871
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FASFPH 6
FAS PH
Sbjct: 321 FASAPH 326
20|Sequence|96|105|HLEELELNEN
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 1649 EEMEVNE 1655
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 1641 EEVEVNE 1647
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 1651 EEVEVNE 1657
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 1639 EEVEVNE 1645
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 1644 EEVEVNE 1650
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 1632 EEVEVNE 1638
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 1633 EEVEVNE 1639
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 1631 EEVEVNE 1637
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 1633 EEVEVNE 1639
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 1633 EEVEVNE 1639
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 1635 EEVEVNE 1641
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 1630 EEVEVNE 1636
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 ELELNEN 10
ELEL EN
Sbjct: 888 ELELEEN 894
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 HLEELELNE 9
HL ELE E
Sbjct: 1442 HLTELEKEE 1450
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 HLEELELNE 9
HL ELE E
Sbjct: 1442 HLTELEKEE 1450
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 HLEELELNE 9
HL ELE E
Sbjct: 1442 HLTELEKEE 1450
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 HLEELELNE 9
HL ELE E
Sbjct: 1442 HLTELEKEE 1450
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 HLEELELNE 9
HL ELE E
Sbjct: 1442 HLTELEKEE 1450
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 HLEELELNE 9
HL ELE E
Sbjct: 1442 HLTELEKEE 1450
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 HLEELELNE 9
HL ELE E
Sbjct: 1442 HLTELEKEE 1450
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 HLEELE 6
HLE+LE
Sbjct: 326 HLEQLE 331
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 2 LEELELNE 9
+EE+EL E
Sbjct: 175 VEEIELQE 182
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 3 EELELNE 9
EE+E+NE
Sbjct: 115 EEVEVNE 121
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 LEELELN 8
+EE+ELN
Sbjct: 1306 IEEVELN 1312
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 LEELELN 8
+EE+ELN
Sbjct: 1306 IEEVELN 1312
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 HLEELE 6
HLE+LE
Sbjct: 326 HLEQLE 331
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 HLEELEL 7
H EELE+
Sbjct: 1063 HSEELEI 1069
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 HLEELEL 7
H EELE+
Sbjct: 1063 HSEELEI 1069
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 HLEELEL 7
H EELE+
Sbjct: 1059 HSEELEI 1065
21|Sequence|101|110|ELNENIVSAV
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 2 LNENIVSAV 10
LNEN++S V
Sbjct: 125 LNENVISGV 133
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 2 LNENIVSAV 10
LNEN++S V
Sbjct: 125 LNENVISGV 133
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 ENIVSAV 10
ENI+SAV
Sbjct: 1263 ENIISAV 1269
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 ENIVSAV 10
ENI+SAV
Sbjct: 1263 ENIISAV 1269
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 ENIVSAV 10
ENI+SAV
Sbjct: 1263 ENIISAV 1269
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 ELNENIVSAV 10
ELN +VS V
Sbjct: 443 ELNSGVVSEV 452
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 ELNENIVSAV 10
ELN +VS V
Sbjct: 453 ELNSGVVSEV 462
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 ELNENIV 7
+LNEN+V
Sbjct: 893 KLNENVV 899
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 ELNENIV 7
+LNEN+V
Sbjct: 893 KLNENVV 899
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 ELNENIV 7
+LNEN+V
Sbjct: 893 KLNENVV 899
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 ELNENIV 7
+LNEN+V
Sbjct: 893 KLNENVV 899
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 ELNENIV 7
+LNEN+V
Sbjct: 893 KLNENVV 899
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 ELNENIV 7
+LNEN+V
Sbjct: 893 KLNENVV 899
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 1 ELNENIVSAV 10
+++ENIVS +
Sbjct: 146 DIDENIVSTL 155
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 ELNENIVSAV 10
+++ENIVS +
Sbjct: 146 DIDENIVSTL 155
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ELNENIVSAV 10
+++ENIVS +
Sbjct: 146 DIDENIVSTL 155
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ELNENIVSAV 10
+++ENIVS +
Sbjct: 146 DIDENIVSTL 155
>sp|UL96_HHV7J|PROTEIN U68|Human herpesvirus 7 (strain JI)
Query: 2 LNENIVS 8
LN+N+VS
Sbjct: 42 LNQNLVS 48
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 1 ELNENIVSAV 10
+LN+ +VS++
Sbjct: 140 QLNDEVVSSL 149
22|Sequence|106|115|IVSAVEPGAF
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSAVEPG 8
V AVEPG
Sbjct: 1570 VIAVEPG 1576
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSAVEPG 8
V AVEPG
Sbjct: 1570 VIAVEPG 1576
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSAVEPG 8
V AVEPG
Sbjct: 1570 VIAVEPG 1576
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSAVEPG 8
V AVEPG
Sbjct: 1570 VIAVEPG 1576
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSAVEPG 8
V AVEPG
Sbjct: 1570 VIAVEPG 1576
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VSAVEPG 8
V AVEPG
Sbjct: 1572 VIAVEPG 1578
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VSAVEPG 8
V AVEPG
Sbjct: 1571 VIAVEPG 1577
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VSAVEPG 8
V AVEPG
Sbjct: 1572 VIAVEPG 1578
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 VSAVEPG 8
V A+EPG
Sbjct: 1571 VLAIEPG 1577
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 VSAVEPG 8
V A+EPG
Sbjct: 1571 VLAIEPG 1577
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 VSAVEPG 8
V A+EPG
Sbjct: 1571 VLAIEPG 1577
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 VSAVEPG 8
V A+EPG
Sbjct: 1571 VLAIEPG 1577
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 VSAVEPG 8
V A+EPG
Sbjct: 1571 VLAIEPG 1577
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 1 IVSAVEPGAF 10
+ V+PG F
Sbjct: 666 VYEVVDPGVF 675
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 IVSAVEPG 8
++SA+ PG
Sbjct: 681 VISALHPG 688
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 5 VEPGAF 10
VEPG F
Sbjct: 2093 VEPGVF 2098
23|Sequence|111|120|EPGAFNNLFN
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 EPGAFNNLFN 10
EPG NN+F+
Sbjct: 666 EPGVNNNVFS 675
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 EPGAFNNLFN 10
EPG NN+F+
Sbjct: 666 EPGVNNNVFS 675
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 EPGAFNNLFN 10
EPG NN+F+
Sbjct: 666 EPGVNNNVFS 675
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 GAFNNLF 9
GAFN+LF
Sbjct: 723 GAFNSLF 729
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 4 AFNNLFN 10
A NNLFN
Sbjct: 530 AINNLFN 536
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 EPGAFN 6
EPG FN
Sbjct: 677 EPGTFN 682
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 1 EPGAFN 6
EPG FN
Sbjct: 677 EPGTFN 682
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 EPGAFNNLFN 10
EPG NN+ +
Sbjct: 666 EPGVNNNVLS 675
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 PGAFNNLFN 10
PGA +FN
Sbjct: 1857 PGAGQRMFN 1865
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 EPGAFNNLF 9
EP AF+ +F
Sbjct: 1771 EPSAFHYVF 1779
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 EPGAFNNLF 9
EP AF+ +F
Sbjct: 1772 EPSAFHYVF 1780
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 EPGAFNNLF 9
EP AF+ +F
Sbjct: 1771 EPSAFHYVF 1779
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 EPGAFNNLF 9
EP AF+ +F
Sbjct: 1771 EPSAFHYVF 1779
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 EPGAFNNLF 9
EP AF+ +F
Sbjct: 1772 EPSAFHYVF 1780
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 EPGAFNNLF 9
EP AF+ +F
Sbjct: 1774 EPSAFHYVF 1782
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 EPGAFNNLF 9
EP AF+ +F
Sbjct: 1774 EPSAFHYVF 1782
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 PGAFNNLFN 10
P F+N+FN
Sbjct: 1533 PLQFHNIFN 1541
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 PGAFNNLFN 10
P F+N+FN
Sbjct: 1533 PLQFHNIFN 1541
>sp|VPU_HV1VI|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 PGAFNNL 8
PG NNL
Sbjct: 75 PGDINNL 81
>sp|VPU_HV193|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 PGAFNNL 8
PG NNL
Sbjct: 75 PGDINNL 81
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 EPGAFNNLF 9
+PG FN F
Sbjct: 4474 KPGHFNKEF 4482
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 GAFNNLFN 10
G F+NLF+
Sbjct: 116 GQFSNLFS 123
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 GAFNNLF 9
GAF +LF
Sbjct: 738 GAFRSLF 744
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 GAFNNLF 9
GAF +LF
Sbjct: 734 GAFRSLF 740
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 GAFNNLF 9
GAF +LF
Sbjct: 738 GAFRSLF 744
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 PGAFNNL 8
PG NNL
Sbjct: 367 PGQVNNL 373
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 GAFNNL 8
G FNNL
Sbjct: 263 GCFNNL 268
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 EPGAFNNLF 9
+PG FN F
Sbjct: 4449 KPGHFNEEF 4457
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 2 PGAFNN 7
PG+FN+
Sbjct: 107 PGSFND 112
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 PGAFNNL 8
PG NNL
Sbjct: 367 PGQVNNL 373
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 2 PGAFNN 7
PG+FN+
Sbjct: 107 PGSFND 112
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 2 PGAFNN 7
PG+FN+
Sbjct: 107 PGSFND 112
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 PGAFNNL 8
PG NNL
Sbjct: 368 PGEVNNL 374
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PGAFNNLFN 10
PG F + FN
Sbjct: 116 PGLFFDAFN 124
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 PGAFNNL 8
PG NNL
Sbjct: 369 PGRVNNL 375
24|Sequence|116|125|NNLFNLRTLG
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LFNLRTLG 10
LFNL+TLG
Sbjct: 2450 LFNLKTLG 2457
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 LFNLRTLG 10
LFNL+TLG
Sbjct: 2423 LFNLKTLG 2430
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 LFNLRTLG 10
LFNL+TLG
Sbjct: 2428 LFNLKTLG 2435
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NLFN+R L
Sbjct: 597 NLFNIRNL 604
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 NLFNLRTL 9
NL+NLR L
Sbjct: 596 NLYNLRNL 603
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 LFNLRTLG 10
LF+ RTLG
Sbjct: 626 LFSYRTLG 633
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 LFNLRTLG 10
LF+ RTLG
Sbjct: 626 LFSYRTLG 633
>sp|RDRP_I82A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 1 NLYNIRNL 8
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 3 LFNLRTLG 10
LF++R+LG
Sbjct: 613 LFSIRSLG 620
>sp|PG132_VARV|VIRION morphogenesis protein OPG132|Variola virus
Query: 1 NNLFNLRTL 9
NNL N+R L
Sbjct: 352 NNLLNMRDL 360
>sp|PG132_VAR67|VIRION morphogenesis protein OPG132|Variola virus (isolate
Query: 1 NNLFNLRTL 9
NNL N+R L
Sbjct: 352 NNLLNMRDL 360
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 NNLFNLRTL 9
+NL+N+R L
Sbjct: 596 SNLYNIRNL 604
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 NLFNLRTL 9
N++NLR L
Sbjct: 596 NIYNLRNL 603
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 NLFNLRTL 9
N++NLR L
Sbjct: 596 NIYNLRNL 603
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 NLFNLRTL 9
N++NLR L
Sbjct: 596 NIYNLRNL 603
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 NNLFNLRTL 9
+NL+N+R L
Sbjct: 596 SNLYNIRNL 604
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)
Query: 1 NNLFNLRTLG 10
NN+ LR+LG
Sbjct: 207 NNIGVLRSLG 216
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 1 NNLFNLRTL 9
+NL+N+R L
Sbjct: 596 SNLYNIRNL 604
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 1 NNLFNLRT 8
N+L NLR+
Sbjct: 474 NSLLNLRS 481
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 NNLFNLRT 8
N+L NLR+
Sbjct: 474 NSLLNLRS 481
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 1 NNLFNLRT 8
+NL NLRT
Sbjct: 438 SNLNNLRT 445
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 1 NNLFNLRT 8
+NL NLRT
Sbjct: 438 SNLNNLRT 445
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NLFNLRTL 9
NL+N+R L
Sbjct: 597 NLYNIRNL 604
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 NNLFNLR 7
NNL NLR
Sbjct: 502 NNLDNLR 508
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 NNLFNLR 7
NNL NLR
Sbjct: 502 NNLDNLR 508
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 NNLFNLR 7
NNL NLR
Sbjct: 502 NNLDNLR 508
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NLFNLRTLG 10
NLF+ RT+
Sbjct: 224 NLFHTRTVA 232
25|Sequence|121|130|LRTLGLRSNR
>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain
Query: 1 LRTLGLRSNR 10
+RT G R NR
Sbjct: 97 IRTEGSRQNR 106
>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate
Query: 1 LRTLGLRSNR 10
+RT G R NR
Sbjct: 97 IRTEGSRQNR 106
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 LRTLGLRS 8
LRTLGL +
Sbjct: 1405 LRTLGLNA 1412
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 LRTLGLRS 8
LRTLGL +
Sbjct: 1411 LRTLGLNA 1418
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LRTLGLRSN 9
LRTLGL N
Sbjct: 3284 LRTLGLAIN 3292
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LRTLGLRSN 9
LRTLGL N
Sbjct: 3284 LRTLGLAIN 3292
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 LGLRSN 9
LGLRSN
Sbjct: 236 LGLRSN 241
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 LRTLGLRSN 9
+RT GLR++
Sbjct: 587 IRTYGLRNS 595
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 LRTLGLRSN 9
+RT GLR++
Sbjct: 587 IRTYGLRNS 595
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LRTLGLRSN 9
+RT GLR++
Sbjct: 587 IRTYGLRNS 595
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LRTLGLRSN 9
+RT GLR++
Sbjct: 587 IRTYGLRNS 595
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 LRTLGLRSN 9
+RT GLR++
Sbjct: 587 IRTYGLRNS 595
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 LRTLGL 6
LRTLGL
Sbjct: 3282 LRTLGL 3287
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 LRTLGL 6
LRTLGL
Sbjct: 3286 LRTLGL 3291
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 LRTLGL 6
LRTLGL
Sbjct: 3286 LRTLGL 3291
26|Sequence|126|135|LRSNRLKLIP
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RSNRLKLIP 10
R N+LKL P
Sbjct: 139 RENKLKLFP 147
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RSNRLKLIP 10
R N+LKL P
Sbjct: 139 RENKLKLFP 147
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 1 LRSNRLK 7
LR NRLK
Sbjct: 443 LRENRLK 449
>sp|TEG3_VZVO|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RSNRLKLI 9
R NR+KL+
Sbjct: 12 RRNRVKLV 19
>sp|TEG3_VZVD|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 RSNRLKLI 9
R NR+KL+
Sbjct: 12 RRNRVKLV 19
27|Sequence|131|140|LKLIPLGVFT
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KLIPLGVFT 10
KL+PLG+ T
Sbjct: 31 KLLPLGLIT 39
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 2 KLIPLGVFT 10
KL+PLG+ T
Sbjct: 100 KLLPLGLIT 108
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KLIPLGVFT 10
KL+PLG+ T
Sbjct: 100 KLLPLGLIT 108
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 KLIPLG 7
KLIPLG
Sbjct: 161 KLIPLG 166
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LKLIPLGVF 9
L L+P GVF
Sbjct: 1426 LALLPQGVF 1434
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LKLIPLGVF 9
L L+P GVF
Sbjct: 1426 LALLPQGVF 1434
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LKLIPLGVF 9
L L+P GVF
Sbjct: 1426 LALLPQGVF 1434
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LKLIPLGVF 9
L L+P GVF
Sbjct: 1426 LALLPQGVF 1434
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LKLIPLGVF 9
L L+P GVF
Sbjct: 1426 LALLPQGVF 1434
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 2 KLIPLG 7
KLIPLG
Sbjct: 157 KLIPLG 162
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 LKLIPLGVFT 10
+KL P G +T
Sbjct: 144 IKLTPYGTYT 153
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 2 KLIPLGVF 9
+ IP GVF
Sbjct: 423 RFIPKGVF 430
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 2 KLIPLGVF 9
+ IP GVF
Sbjct: 423 RFIPKGVF 430
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 2 KLIPLGVF 9
+ IP GVF
Sbjct: 423 RFIPKGVF 430
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 2 KLIPLGVF 9
+ IP GVF
Sbjct: 423 RFIPKGVF 430
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 2 KLIPLGVF 9
+ IP GVF
Sbjct: 423 RFIPKGVF 430
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 2 KLIPLGVF 9
+ IP GVF
Sbjct: 423 RFIPKGVF 430
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 2 KLIPLGVF 9
+ IP GVF
Sbjct: 423 RFIPKGVF 430
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 KLIPLGVFT 10
KL+P VF+
Sbjct: 3519 KLLPQSVFS 3527
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 LIPLGVF 9
++PLG+F
Sbjct: 403 VLPLGLF 409
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 LIPLGVF 9
++PLG+F
Sbjct: 403 VLPLGLF 409
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 3 LIPLGVFT 10
L+P+G+F+
Sbjct: 44 LLPVGLFS 51
>sp|A18_YLDV|TRANSCRIPT termination protein A18|Yaba-like disease virus (YLDV)
Query: 3 LIPLGVFT 10
L+P+G F+
Sbjct: 44 LVPIGFFS 51
28|Sequence|136|145|LGVFTGLSNL
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 GVFTGLSNL 10
GVFTGL+N+
Sbjct: 1561 GVFTGLTNI 1569
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 GVFTGLSNL 10
GVFTGL+N+
Sbjct: 1561 GVFTGLTNI 1569
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 GVFTGLSNL 10
GVFTGL+++
Sbjct: 1561 GVFTGLTHI 1569
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 GVFTGLSNL 10
GVFTGL+++
Sbjct: 1562 GVFTGLTHI 1570
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 GVFTGLSNL 10
GVFTGL+++
Sbjct: 1565 GVFTGLTHI 1573
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 GVFTGLSNL 10
GVFTGL+++
Sbjct: 1565 GVFTGLTHI 1573
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GVFTGLSNL 10
GVFTGL+++
Sbjct: 1560 GVFTGLTHI 1568
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 GVFTGLSNL 10
GVFTGL+++
Sbjct: 1564 GVFTGLTHI 1572
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 GVFTGLSNL 10
GVFTGL+++
Sbjct: 1560 GVFTGLTHI 1568
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 GVFTGLSNL 10
GVFTGL+++
Sbjct: 1565 GVFTGLTHI 1573
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 GVFTGLSNL 10
GVFTGL+++
Sbjct: 1560 GVFTGLTHI 1568
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 GVFTGLSNL 10
GVFTG++++
Sbjct: 1558 GVFTGMTHI 1566
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 LGVFTGLSNL 10
LG+F G+ NL
Sbjct: 394 LGMFMGMFNL 403
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GVFTGL 7
G+FTGL
Sbjct: 284 GIFTGL 289
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GVFTGL 7
G+FTGL
Sbjct: 284 GIFTGL 289
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GVFTGL 7
G+FTGL
Sbjct: 284 GIFTGL 289
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LGVFTGLSNL 10
+G+ GLSNL
Sbjct: 131 MGIEYGLSNL 140
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LGVFTGLSNL 10
+G+ GLSNL
Sbjct: 131 MGIEYGLSNL 140
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 1 LGVFTGLSNL 10
+G+ GLSNL
Sbjct: 131 MGIEYGLSNL 140
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 GVFTGLSNL 10
VFTGL+++
Sbjct: 1564 AVFTGLTHI 1572
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 GVFTGLSNL 10
VFTGL+++
Sbjct: 1564 AVFTGLTHI 1572
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 GVFTGLSNL 10
VFTGL+++
Sbjct: 1564 AVFTGLTHI 1572
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 GVFTGLSNL 10
VFTGL+++
Sbjct: 1564 AVFTGLTHI 1572
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 GVFTGLSNL 10
VFTGL+++
Sbjct: 1564 AVFTGLTHI 1572
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 GVFTGLSNL 10
VFTGL+++
Sbjct: 1564 AVFTGLTHI 1572
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 GVFTGLSNL 10
VFTGL+++
Sbjct: 1564 AVFTGLTHI 1572
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VFTGLSNL 10
VFTGL+++
Sbjct: 1561 VFTGLTHI 1568
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 VFTGLSNL 10
VFTGL+++
Sbjct: 1569 VFTGLTHI 1576
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 VFTGLSNL 10
VFTGL+++
Sbjct: 1567 VFTGLTHI 1574
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 VFTGLSNL 10
VFTGL+++
Sbjct: 1567 VFTGLTHI 1574
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VFTGLSNL 10
VFTGL+++
Sbjct: 1561 VFTGLTHI 1568
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VFTGLSNL 10
VFTGL+++
Sbjct: 1561 VFTGLTHI 1568
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VFTGLSNL 10
VFTGL+++
Sbjct: 1561 VFTGLTHI 1568
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 VFTGLSNL 10
VFTGL+++
Sbjct: 1561 VFTGLTHI 1568
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 VFTGLSNL 10
VFTGL+++
Sbjct: 1561 VFTGLTHI 1568
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 VFTGLSNL 10
VFTGL+++
Sbjct: 1561 VFTGLTHI 1568
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VFTGLSNL 10
VFTGL+++
Sbjct: 1561 VFTGLTHI 1568
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VFTGLSNL 10
VFTGL+++
Sbjct: 1561 VFTGLTHI 1568
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 2 GVFTGLSNL 10
VFT ++NL
Sbjct: 511 AVFTAITNL 519
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 GVFTGLSNL 10
VFT ++NL
Sbjct: 510 AVFTAITNL 518
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 3 VFTGLSNL 10
++T LSNL
Sbjct: 273 IYTSLSNL 280
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 LGVFTGLSNL 10
LG++TG NL
Sbjct: 1769 LGLWTGDRNL 1778
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 GVFTGLS 8
G+F GLS
Sbjct: 714 GIFGGLS 720
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 5 TGLSNL 10
TGLSN+
Sbjct: 310 TGLSNI 315
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 5 TGLSNL 10
TGLSN+
Sbjct: 320 TGLSNI 325
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 5 TGLSNL 10
TGLSN+
Sbjct: 314 TGLSNI 319
29|Sequence|141|150|GLSNLTKLDI
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 LSNLTK 7
LSNLTK
Sbjct: 713 LSNLTK 718
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 LSNLTK 7
LSNLTK
Sbjct: 713 LSNLTK 718
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 2 LSNLTK 7
LSNLTK
Sbjct: 713 LSNLTK 718
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain
Query: 2 LSNLTKLD 9
LSNL +LD
Sbjct: 25 LSNLERLD 32
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GLSNLTKL 8
G+S++TKL
Sbjct: 5366 GVSDVTKL 5373
30|Sequence|146|155|TKLDISENKI
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 TKLDISENK 9
T LDIS NK
Sbjct: 813 TALDISSNK 821
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 TKLDISENK 9
T LD+S NK
Sbjct: 810 TALDLSSNK 818
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 TKLDISENK 9
T LD+S NK
Sbjct: 809 TALDLSSNK 817
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 TKLDISENK 9
T LD+S NK
Sbjct: 809 TALDLSSNK 817
>sp|PHOSP_ABLVH|PHOSPHOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 KLDISENK 9
KLDISE +
Sbjct: 55 KLDISEGR 62
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 TKLDISENK 9
T LD+S NK
Sbjct: 809 TALDLSSNK 817
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 KLDISE 7
KLDISE
Sbjct: 395 KLDISE 400
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 KLDISE 7
KLDISE
Sbjct: 395 KLDISE 400
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 3 LDISENKI 10
+DISEN +
Sbjct: 404 MDISENPL 411
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 3 LDISENKI 10
+DISEN +
Sbjct: 404 MDISENPL 411
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 KLDISE 7
KLDISE
Sbjct: 395 KLDISE 400
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 2 KLDISE 7
KLDISE
Sbjct: 395 KLDISE 400
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 3 LDISEN 8
LD+SEN
Sbjct: 27 LDLSEN 32
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 1 TKLDISEN 8
T +DIS+N
Sbjct: 382 TNVDISDN 389
31|Sequence|151|160|SENKIVILLD
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 SENKIVIL 8
SENKIVIL
Sbjct: 2250 SENKIVIL 2257
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 SENKIVIL 8
SENKIVIL
Sbjct: 2246 SENKIVIL 2253
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 SENKIVIL 8
SENK+VIL
Sbjct: 2247 SENKVVIL 2254
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SENKIVIL 8
SENK+VIL
Sbjct: 2246 SENKVVIL 2253
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SENKIVIL 8
SENK+VIL
Sbjct: 2246 SENKVVIL 2253
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SENKIVIL 8
SENK+VIL
Sbjct: 2246 SENKVVIL 2253
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SENKIVIL 8
SENK+VIL
Sbjct: 2246 SENKVVIL 2253
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SENKIVIL 8
SENK+VIL
Sbjct: 2246 SENKVVIL 2253
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SENKIVIL 8
SENK+VIL
Sbjct: 2246 SENKVVIL 2253
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 SENKIVIL 8
SENKIV+L
Sbjct: 2246 SENKIVVL 2253
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SENKIVIL 8
SENK+VIL
Sbjct: 2246 SENKVVIL 2253
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SENKIVIL 8
SENK+VIL
Sbjct: 2246 SENKVVIL 2253
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SENKIVIL 8
SENK+VIL
Sbjct: 2246 SENKVVIL 2253
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 SENKIVIL 8
SENKI++L
Sbjct: 2244 SENKIIVL 2251
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SENKIVIL 8
SENK+V+L
Sbjct: 2250 SENKVVVL 2257
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SENKIVIL 8
SENK+V+L
Sbjct: 2246 SENKVVVL 2253
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SENKIVIL 8
SENK+V+L
Sbjct: 2251 SENKVVVL 2258
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 SENKIVIL 8
SENK+++L
Sbjct: 2248 SENKVIVL 2255
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 SENKIVIL 8
+ENK+VIL
Sbjct: 2247 AENKVVIL 2254
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 SENKIVIL 8
SE+K+VIL
Sbjct: 2251 SESKVVIL 2258
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 SENKIVIL 8
SE+K+V+L
Sbjct: 2246 SESKVVVL 2253
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SENKIVILLD 10
+ N+I+++LD
Sbjct: 465 ASNQILVVLD 474
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 SENKIVILLD 10
+ N+I+++LD
Sbjct: 465 ASNQILVVLD 474
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate
Query: 4 KIVILLD 10
KI++LLD
Sbjct: 78 KIIVLLD 84
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 4 KIVILLD 10
KI++LLD
Sbjct: 78 KIIVLLD 84
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 4 KIVILLD 10
KI++LLD
Sbjct: 78 KIIVLLD 84
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KIVILLD 10
KI++LLD
Sbjct: 78 KIIVLLD 84
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 4 KIVILLD 10
KI++LLD
Sbjct: 78 KIIVLLD 84
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 KIVILLD 10
KI++LLD
Sbjct: 78 KIIVLLD 84
32|Sequence|156|165|VILLDYMFQD
>sp|PG029_VACCC|IFN signaling evasion protein OPG029|Vaccinia virus (strain Copenhagen)
Query: 1 VILLDYMFQD 10
+IL++Y+F D
Sbjct: 120 IILMEYIFDD 129
>sp|PG029_MONPV|IFN signaling evasion protein OPG029|Monkeypox virus (MPXV)
Query: 1 VILLDYMFQD 10
+IL++Y+F D
Sbjct: 120 IILMEYIFDD 129
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LLDYMFQD 10
LL+Y QD
Sbjct: 262 LLEYTIQD 269
33|Sequence|161|170|YMFQDLYNLK
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 MFQDLYNL 9
MF+DLY L
Sbjct: 193 MFKDLYGL 200
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 YMFQDLYNL 9
Y QDLYNL
Sbjct: 1762 YSKQDLYNL 1770
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 YMFQDLYNL 9
Y QDLYNL
Sbjct: 1762 YSKQDLYNL 1770
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 YMFQDLYNL 9
Y QDLYNL
Sbjct: 1762 YSKQDLYNL 1770
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 YMFQDLYNL 9
Y F+DL+ L
Sbjct: 208 YKFKDLFGL 216
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 3 FQDLYNLK 10
FQ+ YN+K
Sbjct: 466 FQNAYNVK 473
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 3 FQDLYNLK 10
FQ+ YN+K
Sbjct: 466 FQNAYNVK 473
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 YMFQDLYNL 9
+ F DL+NL
Sbjct: 193 FKFHDLHNL 201
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 1 YMFQDLYNL 9
+ F DL+NL
Sbjct: 192 FKFHDLHNL 200
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 YMFQDLYN 8
Y QD+YN
Sbjct: 217 YFSQDIYN 224
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 1 YMFQDLYN 8
Y+F+DL N
Sbjct: 588 YIFRDLSN 595
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 MFQDLYNL 9
+F+D+Y L
Sbjct: 203 VFKDIYGL 210
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 QDLYNLK 10
QDL+N++
Sbjct: 92 QDLFNIE 98
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 QDLYNLK 10
QDL+N++
Sbjct: 92 QDLFNIE 98
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 QDLYNLK 10
QDL+N++
Sbjct: 92 QDLFNIE 98
>sp|PG030_VACCC|PROTEIN OPG030|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FQDLYNLK 10
QDLY++K
Sbjct: 188 LQDLYHMK 195
34|Sequence|166|175|LYNLKSLEVG
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LYNLKSLEVG 10
+YNL +E G
Sbjct: 2495 MYNLWKMETG 2504
>sp|PAX_I05A1|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 NLKSLE 8
NLKSLE
Sbjct: 204 NLKSLE 209
>sp|PAX_I04A1|PROTEIN PA-X|Influenza A virus (strain A/Vietnam/1203/2004
Query: 3 NLKSLE 8
NLKSLE
Sbjct: 204 NLKSLE 209
>sp|PAX_I02A6|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 3 NLKSLE 8
NLKSLE
Sbjct: 204 NLKSLE 209
>sp|PAX_I02A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 3 NLKSLE 8
NLKSLE
Sbjct: 204 NLKSLE 209
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 YNLKSLEVG 10
YN+KSL V
Sbjct: 662 YNIKSLLVA 670
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 YNLKSLEVG 10
YN+KSL V
Sbjct: 662 YNIKSLLVA 670
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 2 YNLKSLEVG 10
YN+KSL V
Sbjct: 662 YNIKSLLVA 670
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 4 LKSLEVG 10
LKSL+VG
Sbjct: 173 LKSLKVG 179
35|Sequence|171|180|SLEVGDNDLV
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 LEVGDNDLV 10
LE+ +NDL+
Sbjct: 506 LEITENDLI 514
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 2 LEVGDNDL 9
L GDND+
Sbjct: 575 LGTGDNDI 582
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 2 LEVGDNDL 9
L GDND+
Sbjct: 575 LGTGDNDI 582
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 2 LEVGDNDL 9
L GDND+
Sbjct: 575 LGTGDNDI 582
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 LEVGDNDL 9
L GDND+
Sbjct: 575 LGTGDNDI 582
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 3 EVGDNDLV 10
+VGDN L+
Sbjct: 495 QVGDNKLL 502
>sp|NCAP_CVHNL|NUCLEOPROTEIN coronavirus NL63 (HCoV-NL63)
Query: 4 VGDNDLV 10
+GD+DLV
Sbjct: 259 MGDSDLV 265
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SLEVGDNDLV 10
SL+VG D+V
Sbjct: 1430 SLDVGFQDVV 1439
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SLEVGDNDLV 10
SL+VG D+V
Sbjct: 1596 SLDVGFQDVV 1605
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SLEVGDNDLV 10
SL+VG D+V
Sbjct: 1596 SLDVGFQDVV 1605
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SLEVGDNDLV 10
SL+VG D+V
Sbjct: 1596 SLDVGFQDVV 1605
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SLEVGDNDLV 10
SL+VG D+V
Sbjct: 1594 SLDVGFQDVV 1603
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SLEVGDNDLV 10
SL+VG D+V
Sbjct: 1596 SLDVGFQDVV 1605
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SLEVGDNDLV 10
SL+VG D+V
Sbjct: 1596 SLDVGFQDVV 1605
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SLEVGDNDLV 10
SL+VG D+V
Sbjct: 1596 SLDVGFQDVV 1605
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SLEVGDNDLV 10
SL+VG D+V
Sbjct: 1596 SLDVGFQDVV 1605
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SLEVGDNDLV 10
SL+VG D+V
Sbjct: 1596 SLDVGFQDVV 1605
36|Sequence|176|185|DNDLVYISHR
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 DNDLVYISHR 10
DN L+Y+ R
Sbjct: 559 DNSLMYLHSR 568
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 DNDLVYISHR 10
DN L+Y+ R
Sbjct: 563 DNSLLYLHSR 572
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DNDLVYI 7
DN L+Y+
Sbjct: 2223 DNQLIYV 2229
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DNDLVYI 7
DN L+Y+
Sbjct: 2223 DNQLIYV 2229
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DNDLVYI 7
DN L+Y+
Sbjct: 2223 DNQLIYV 2229
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DNDLVYI 7
DN L+Y+
Sbjct: 2223 DNQLIYV 2229
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DNDLVYI 7
DN L+Y+
Sbjct: 2223 DNQLIYV 2229
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 DNDLVY 6
DN+LVY
Sbjct: 1401 DNELVY 1406
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 DNDLVY 6
DN+LVY
Sbjct: 1401 DNELVY 1406
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 DNDLVY 6
DN+LVY
Sbjct: 1401 DNELVY 1406
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 DNDLVY 6
DN+LVY
Sbjct: 1401 DNELVY 1406
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 DNDLVY 6
DN+LVY
Sbjct: 1401 DNELVY 1406
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 1 DNDLVYIS 8
D D++Y S
Sbjct: 126 DRDMIYTS 133
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 3 DLVYISH 9
DLV+ SH
Sbjct: 477 DLVFSSH 483
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DNDLVY 6
D DLVY
Sbjct: 343 DRDLVY 348
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DNDLVY 6
D DLVY
Sbjct: 343 DRDLVY 348
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DNDLVY 6
D DLVY
Sbjct: 343 DRDLVY 348
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 DLVYISH 9
D+V+I+H
Sbjct: 179 DIVHINH 185
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 DLVYISH 9
D+V+I+H
Sbjct: 179 DIVHINH 185
37|Sequence|181|190|YISHRAFSGL
>sp|NCAP_UUKS|NUCLEOPROTEIN virus (strain S23) (UUKV)
Query: 4 HRAFSGL 10
H AF+GL
Sbjct: 155 HNAFAGL 161
>sp|UL79_HHV7J|PROTEIN U52|Human herpesvirus 7 (strain JI)
Query: 2 ISHRAFS 8
ISH AFS
Sbjct: 201 ISHGAFS 207
38|Sequence|186|195|AFSGLNSLEQ
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 2 FSGLNSLEQ 10
SG+N+LE
Sbjct: 284 LSGINNLEH 292
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 2 FSGLNSLEQ 10
SG+N+LE
Sbjct: 284 LSGINNLEH 292
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 2 FSGLNSLEQ 10
SG+N+LE
Sbjct: 284 LSGINNLEH 292
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 2 FSGLNSLEQ 10
SG+N+LE
Sbjct: 284 LSGINNLEH 292
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 2 FSGLNSLEQ 10
SG+N+LE
Sbjct: 284 LSGINNLEH 292
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 FSGLNSLEQ 10
SG+N+LE
Sbjct: 302 LSGVNNLEH 310
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 2 FSGLNSLEQ 10
SG+N+LE
Sbjct: 302 LSGVNNLEH 310
39|Sequence|191|200|NSLEQLTLEK
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LEQLTLEK 10
LE++TLEK
Sbjct: 206 LEEMTLEK 213
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LEQLTLEK 10
LE++TLEK
Sbjct: 206 LEEMTLEK 213
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 LEQLTLEK 10
LE++TLEK
Sbjct: 206 LEEMTLEK 213
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 NSLEQLTLEK 10
N+ +QL+LEK
Sbjct: 572 NNTQQLSLEK 581
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 1 NSLEQLTL 8
N+LEQ+T+
Sbjct: 192 NALEQITI 199
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 3 LEQLTLE 9
+E+LTLE
Sbjct: 200 IEELTLE 206
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 3 LEQLTLE 9
+E+LTLE
Sbjct: 199 IEELTLE 205
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 3 LEQLTLE 9
+E+LTLE
Sbjct: 200 IEELTLE 206
40|Sequence|196|205|LTLEKCNLTS
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 LTLEKCNLTS 10
L L KCN+T
Sbjct: 67 LQLGKCNITG 76
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 CNLTS 10
CNLTS
Sbjct: 181 CNLTS 185
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 CNLTS 10
CNLTS
Sbjct: 181 CNLTS 185
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 CNLTS 10
CNLTS
Sbjct: 181 CNLTS 185
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 CNLTS 10
CNLTS
Sbjct: 181 CNLTS 185
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 CNLTS 10
CNLTS
Sbjct: 181 CNLTS 185
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 6 CNLTS 10
CNLTS
Sbjct: 182 CNLTS 186
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 6 CNLTS 10
CNLTS
Sbjct: 182 CNLTS 186
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 6 CNLTS 10
CNLTS
Sbjct: 182 CNLTS 186
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 6 CNLTS 10
CNLTS
Sbjct: 182 CNLTS 186
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 6 CNLTS 10
CNLTS
Sbjct: 182 CNLTS 186
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LTLEKCNL 8
+ LEKC+L
Sbjct: 6795 MLLEKCDL 6802
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 LEKCNLTS 10
++KC +TS
Sbjct: 1484 IQKCQITS 1491
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 LEKCNLTS 10
++KC +TS
Sbjct: 1514 IQKCQITS 1521
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LTLEKCNL 8
+ LEKC+L
Sbjct: 6818 MLLEKCDL 6825
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 LEKCNLTS 10
++KC +TS
Sbjct: 1464 IQKCQITS 1471
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 LEKCNLTS 10
++KC +TS
Sbjct: 1484 IQKCQITS 1491
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 LEKCNLTS 10
++KC +TS
Sbjct: 1514 IQKCQITS 1521
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 LEKCNLTS 10
++KC +TS
Sbjct: 1464 IQKCQITS 1471
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LEKCNLT 9
+E CNLT
Sbjct: 112 VENCNLT 118
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LEKCNLT 9
+E CNLT
Sbjct: 112 VENCNLT 118
41|Sequence|201|210|CNLTSIPTEA
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CNLTSIPTE 9
CN ++P E
Sbjct: 131 CNFITVPEE 139
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CNLTSIPTE 9
CN ++P E
Sbjct: 131 CNFITVPEE 139
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 CNLTSIPTE 9
CN TS+P +
Sbjct: 95 CNFTSLPYQ 103
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 NLTSIP 7
N+TSIP
Sbjct: 141 NMTSIP 146
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 LTSIPTEA 10
LTS PT+A
Sbjct: 244 LTSTPTDA 251
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 NLTSIP 7
N+TSIP
Sbjct: 141 NMTSIP 146
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 1 CNLTSI 6
CN+TSI
Sbjct: 64 CNITSI 69
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 LTSIPTE 9
+TSIPT+
Sbjct: 2567 ITSIPTD 2573
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 LTSIPTE 9
+TSIPT+
Sbjct: 2567 ITSIPTD 2573
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NLTSIPTEA 10
N+TS+P A
Sbjct: 509 NVTSLPIAA 517
42|Sequence|206|215|IPTEALSHLH
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 PTEALSHL 9
PT+A +HL
Sbjct: 5945 PTQAPTHL 5952
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 PTEALSHL 9
PT+A +HL
Sbjct: 5922 PTQAPTHL 5929
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 PTEALSHLH 10
PTE L HL+
Sbjct: 507 PTEDLLHLN 515
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 IPTEALSH 8
IP+ A++H
Sbjct: 1038 IPSNAMTH 1045
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 IPTEALSHL 9
IP + L HL
Sbjct: 1248 IPVKGLEHL 1256
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 TEALSHL 9
TEA+SH+
Sbjct: 940 TEAISHV 946
>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39
Query: 2 PTEALSHLH 10
P E L HL+
Sbjct: 114 PAEKLRHLN 122
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IPTEALSHL 9
IPT+ L+H+
Sbjct: 15 IPTDFLTHV 23
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IPTEALSHL 9
IPT+ L+H+
Sbjct: 15 IPTDFLTHV 23
>sp|VE6_HPVME|PROTEIN E6|Human papillomavirus type ME180
Query: 2 PTEALSHLH 10
P E L HL+
Sbjct: 114 PAEKLRHLN 122
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 IPTEAL 6
+PTEAL
Sbjct: 142 VPTEAL 147
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 IPTEALSH 8
+PT+ L H
Sbjct: 2913 VPTKVLRH 2920
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 IPTEALSH 8
+PT+ L H
Sbjct: 2943 VPTKVLRH 2950
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 IPTEALSH 8
+PT+ L H
Sbjct: 2913 VPTKVLRH 2920
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 IPTEALSH 8
+PT+ L H
Sbjct: 2943 VPTKVLRH 2950
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 1 IPTEALSHL 9
+P E +SHL
Sbjct: 437 LPQEYISHL 445
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 2 PTEALSHLH 10
PT +SH++
Sbjct: 23 PTNVVSHVN 31
43|Sequence|211|220|LSHLHGLIVL
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 3 HLHGLIV 9
HLHGL V
Sbjct: 353 HLHGLPV 359
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 3 HLHGLIV 9
HLHGL V
Sbjct: 353 HLHGLPV 359
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 SHLHGLIV 9
SHL G+I+
Sbjct: 1161 SHLKGIII 1168
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1223 THLEGKIIL 1231
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1223 THLEGKIIL 1231
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1214 THLEGKIIL 1222
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1214 THLEGKIIL 1222
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1212 THLEGKIIL 1220
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1208 THLEGKIIL 1216
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1212 THLEGKIIL 1220
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1217 THLEGKIIL 1225
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1217 THLEGKIIL 1225
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1215 THLEGKIIL 1223
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1208 THLEGKIIL 1216
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1208 THLEGKIIL 1216
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1208 THLEGKIIL 1216
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SHLHGLIVL 10
+HL G I+L
Sbjct: 1209 THLEGKIIL 1217
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 SHLHGLI 8
SHL GL+
Sbjct: 1350 SHLSGLL 1356
44|Sequence|216|225|GLIVLRLRHL
>sp|ST_POVBK|SMALL t antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 LIVLRLRHL 10
L LRLRHL
Sbjct: 113 LCQLRLRHL 121
>sp|ST_POVBA|SMALL t antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 LIVLRLRHL 10
L LRLRHL
Sbjct: 113 LCQLRLRHL 121
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 5 LRLRHL 10
LRLRHL
Sbjct: 1016 LRLRHL 1021
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 LRLRHL 10
LRLRHL
Sbjct: 1016 LRLRHL 1021
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 5 LRLRHL 10
LRLRHL
Sbjct: 1016 LRLRHL 1021
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 LRLRHL 10
LRLRHL
Sbjct: 1016 LRLRHL 1021
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 5 LRLRHL 10
LRLRHL
Sbjct: 1008 LRLRHL 1013
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 5 LRLRHL 10
LRLRHL
Sbjct: 1016 LRLRHL 1021
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 5 LRLRHL 10
LRLRHL
Sbjct: 1016 LRLRHL 1021
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 5 LRLRHL 10
LRLRHL
Sbjct: 1016 LRLRHL 1021
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 5 LRLRHL 10
LRLRHL
Sbjct: 1016 LRLRHL 1021
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GLIVLRLRH 9
G IVL LRH
Sbjct: 139 GSIVLILRH 147
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GLIVLRL 7
GLIVLR+
Sbjct: 689 GLIVLRI 695
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GLIVLRL 7
GL+VLR+
Sbjct: 688 GLVVLRI 694
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GLIVLRL 7
G+IVLR+
Sbjct: 680 GIIVLRM 686
>sp|UL40_HCMVM|PROTEIN UL40|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GLIVLRLRHL 10
GL+ +R+R L
Sbjct: 26 GLLCMRIRSL 35
>sp|UL40_HCMVA|PROTEIN UL40|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GLIVLRLRHL 10
GL+ +R+R L
Sbjct: 26 GLLCMRIRSL 35
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GLIVLRL 7
G+IVLR+
Sbjct: 680 GIIVLRI 686
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GLIVLRL 7
G+IVLR+
Sbjct: 687 GIIVLRI 693
>sp|VE6_HPV38|PROTEIN E6|Human papillomavirus 38
Query: 1 GLIVLRLRH 9
GLIV+R ++
Sbjct: 95 GLIVIRCQY 103
45|Sequence|221|230|RLRHLNINAI
>sp|ST_POVBK|SMALL t antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 RLRHLN 6
RLRHLN
Sbjct: 117 RLRHLN 122
>sp|ST_POVBA|SMALL t antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 RLRHLN 6
RLRHLN
Sbjct: 117 RLRHLN 122
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 RLRHLNIN 8
++RH NIN
Sbjct: 1362 KIRHCNIN 1369
>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39
Query: 1 RLRHLN 6
+LRHLN
Sbjct: 117 KLRHLN 122
>sp|VE6_HPVME|PROTEIN E6|Human papillomavirus type ME180
Query: 1 RLRHLN 6
+LRHLN
Sbjct: 117 KLRHLN 122
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 LRHLNIN 8
+ HLNIN
Sbjct: 145 VSHLNIN 151
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 RHLNINAI 10
RHL NAI
Sbjct: 668 RHLGNNAI 675
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RHLNINAI 10
RHL NAI
Sbjct: 668 RHLGNNAI 675
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 RHLNINAI 10
RHL NAI
Sbjct: 668 RHLGNNAI 675
>sp|E312_ADE12|EARLY E3A 12.1 kDa protein|Human adenovirus A serotype 12
Query: 1 RLRHLN 6
RLRHL+
Sbjct: 10 RLRHLD 15
>sp|VE6_HPV18|PROTEIN E6|Human papillomavirus type 18
Query: 1 RLRHLN 6
+LRHLN
Sbjct: 117 KLRHLN 122
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 LRHLNINAI 10
LRH +NA+
Sbjct: 2126 LRHRCVNAL 2134
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 RLRHLNINAI 10
+LR + +NA+
Sbjct: 1414 KLRGMGVNAV 1423
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 5 LNINAI 10
LNINAI
Sbjct: 152 LNINAI 157
46|Sequence|226|235|NINAIRDYSF
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 INAIRDYSF 10
INA+ DY++
Sbjct: 1948 INALNDYNY 1956
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 INAIRDYSF 10
INA+ DY++
Sbjct: 1939 INALNDYNY 1947
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 INAIRDYSF 10
INA+ DY++
Sbjct: 1940 INALNDYNY 1948
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 NINAIRDY 8
N+N++RD+
Sbjct: 730 NVNSVRDW 737
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 NINAIRDY 8
N+N++RD+
Sbjct: 730 NVNSVRDW 737
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 NAIRDYSF 10
NA+RD++
Sbjct: 2746 NALRDFTL 2753
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 NAIRDYSF 10
NA+RD++
Sbjct: 2746 NALRDFTL 2753
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 INAIRD 7
+NAIRD
Sbjct: 1693 LNAIRD 1698
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 INAIRD 7
+NAIRD
Sbjct: 1693 LNAIRD 1698
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 INAIRD 7
+NAIRD
Sbjct: 1693 LNAIRD 1698
>sp|YVIA_VACCC|UNCHARACTERIZED 9.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 INAIRDYSF 10
++ IRD+SF
Sbjct: 1 MSLIRDFSF 9
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 1 NINAIRDYSF 10
NI+ I+D S+
Sbjct: 135 NIDKIKDVSY 144
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NINAIRDYSF 10
NI+ I+D S+
Sbjct: 135 NIDKIKDVSY 144
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NINAIRDYSF 10
NI+ I+D S+
Sbjct: 135 NIDKIKDVSY 144
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 NINAIRDYSF 10
NI+ I+D S+
Sbjct: 135 NIDKIKDVSY 144
47|Sequence|231|240|RDYSFKRLYR
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RDYSFKRLYR 10
RDY+F RL++
Sbjct: 932 RDYTFARLFQ 941
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RDYSFKRLYR 10
RDY+F RL++
Sbjct: 935 RDYTFARLFQ 944
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RDYSFKRLYR 10
RDY+F RL++
Sbjct: 936 RDYTFARLFQ 945
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 1 RDYSFKRL 8
RD+S+KRL
Sbjct: 321 RDWSYKRL 328
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 1 RDYSFKRL 8
RD+S+KRL
Sbjct: 321 RDWSYKRL 328
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 RDYSFKRLY 9
++Y+ KRLY
Sbjct: 360 KEYACKRLY 368
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 1 RDYSFKRLY 9
R+Y+F R Y
Sbjct: 348 RNYAFSRSY 356
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 1 RDYSFKRLY 9
R+Y +KR Y
Sbjct: 220 RNYDWKRSY 228
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 DYSFKRLYR 10
++SF+ +YR
Sbjct: 645 EHSFEEMYR 653
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 DYSFKRLYR 10
++SF+ +YR
Sbjct: 645 EHSFEEMYR 653
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 DYSFKRLYR 10
++SF+ +YR
Sbjct: 645 EHSFEEMYR 653
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 3 YSFKRLY 9
Y+F RLY
Sbjct: 495 YTFPRLY 501
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 3 YSFKRL 8
Y+FKRL
Sbjct: 397 YNFKRL 402
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 5 FKRLYR 10
FKRL+R
Sbjct: 571 FKRLWR 576
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 4 SFKRLYR 10
SFK LYR
Sbjct: 112 SFKILYR 118
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 SFKRLYR 10
SFK LYR
Sbjct: 112 SFKILYR 118
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 DYSFKRL 8
DY FKR+
Sbjct: 630 DYLFKRM 636
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DYSFKRL 8
DY FKR+
Sbjct: 630 DYLFKRM 636
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DYSFKRL 8
DY FKR+
Sbjct: 629 DYLFKRM 635
48|Sequence|236|245|KRLYRLKVLE
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 KRLYRLK 7
+R+YRLK
Sbjct: 1602 ERVYRLK 1608
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 LYRLKVL 9
L+RLKVL
Sbjct: 1798 LFRLKVL 1804
49|Sequence|241|250|LKVLEISHWP
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 5 EISHW 9
E+SHW
Sbjct: 1237 ELSHW 1241
>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 VLEISHWP 10
++E+SH P
Sbjct: 125 LMEVSHRP 132
>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 VLEISHWP 10
++E+SH P
Sbjct: 125 LMEVSHRP 132
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LKVLEISHW 9
L +LE HW
Sbjct: 2381 LFMLETMHW 2389
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LKVLEISHW 9
L +LE HW
Sbjct: 2401 LFMLETMHW 2409
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LKVLEISHW 9
L +LE HW
Sbjct: 2431 LFMLETMHW 2439
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LKVLEISHW 9
L +LE HW
Sbjct: 2381 LFMLETMHW 2389
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LKVLEISHW 9
L +LE HW
Sbjct: 2401 LFMLETMHW 2409
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LKVLEISHW 9
L +LE HW
Sbjct: 2431 LFMLETMHW 2439
50|Sequence|246|255|ISHWPYLDTM
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 2 SHWPYLDT 9
S WPYL +
Sbjct: 567 SRWPYLHS 574
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 WPYLDTM 10
WP+ DT+
Sbjct: 406 WPFCDTL 412
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 2 SHWPYLDT 9
S WPYL +
Sbjct: 567 SRWPYLHS 574
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 SHWPYLDT 9
+ WPYL++
Sbjct: 581 NRWPYLES 588
Query: 4 WPYLDT 9
W Y DT
Sbjct: 536 WTYFDT 541
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 2 SHWPYL 7
S WPYL
Sbjct: 574 SRWPYL 579
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 4 WPYLDT 9
WPYL++
Sbjct: 569 WPYLES 574
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 2 SHWPYLDT 9
+ WPYL++
Sbjct: 568 NRWPYLNS 575
Query: 2 SHWPYLDT 9
S W Y DT
Sbjct: 521 SCWTYFDT 528
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 4 WPYLDT 9
W YLDT
Sbjct: 522 WTYLDT 527
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 3 HWPYLDTM 10
H P+LDT
Sbjct: 757 HIPFLDTF 764
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 ISHWPYL 7
+ WPY+
Sbjct: 391 VGQWPYM 397
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 4 WPYLDT 9
W YLDT
Sbjct: 474 WIYLDT 479
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 3 HWPYLD 8
+WP+LD
Sbjct: 402 NWPWLD 407
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 HWPYLDT 9
H P+LDT
Sbjct: 1041 HIPFLDT 1047
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 2 SHWPYLDT 9
+ WPYL +
Sbjct: 576 NRWPYLTS 583
Query: 4 WPYLDT 9
W Y DT
Sbjct: 531 WSYFDT 536
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 4 WPYLDT 9
WPYL +
Sbjct: 562 WPYLHS 567
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 528 WAYMDT 533
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 528 WQYIDT 533
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 4 WPYLDT 9
WPYL +
Sbjct: 556 WPYLHS 561
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 4 WPYL 7
WPYL
Sbjct: 573 WPYL 576
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 523 WSYIDT 528
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 2 SHWPYLDT 9
S W Y+DT
Sbjct: 522 SCWVYMDT 529
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 528 WQYIDT 533
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 523 WTYIDT 528
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 540 WSYVDT 545
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 2 SHWPYLDT 9
S W Y+DT
Sbjct: 525 SCWVYMDT 532
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 561 WNYIDT 566
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 489 WQYIDT 494
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 3 HWPYLDTM 10
H PYL+T+
Sbjct: 362 HDPYLETV 369
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 529 WGYMDT 534
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 539 WCYIDT 544
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 542 WCYIDT 547
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 3 HWPYLDTM 10
H PYL+T+
Sbjct: 362 HDPYLETV 369
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 SHWPYL 7
SHW +L
Sbjct: 800 SHWDFL 805
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 SHWPYL 7
SHW +L
Sbjct: 800 SHWDFL 805
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 484 WLYMDT 489
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 484 WVYMDT 489
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 WPYLDTM 10
W YLD++
Sbjct: 419 WDYLDSL 425
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 1 ISHWPY 6
++HW Y
Sbjct: 56 VAHWRY 61
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 530 WIYMDT 535
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 484 WIYMDT 489
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 485 WVYMDT 490
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 530 WIYMDT 535
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 483 WIYMDT 488
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 486 WVYMDT 491
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SHWPYLD 8
SH PY++
Sbjct: 1713 SHLPYIE 1719
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 484 WVYIDT 489
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 487 WIYMDT 492
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SHWPYLD 8
SH PY++
Sbjct: 1713 SHLPYIE 1719
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SHWPYLD 8
SH PY++
Sbjct: 1713 SHLPYIE 1719
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SHWPYLD 8
SH PY++
Sbjct: 1713 SHLPYIE 1719
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SHWPYLD 8
SH PY++
Sbjct: 1713 SHLPYIE 1719
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 2 SHWPY 6
S WPY
Sbjct: 425 SWWPY 429
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 4 WPYLDT 9
W Y+DT
Sbjct: 483 WLYMDT 488
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SHWPYLD 8
SH PY++
Sbjct: 1713 SHLPYIE 1719
51|Sequence|251|260|YLDTMTPNCL
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 TMTPNC 9
T+TPNC
Sbjct: 1079 TVTPNC 1084
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 LDTMTPNC 9
++ M PNC
Sbjct: 449 MEIMCPNC 456
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 YLDTMTPNC 9
++DT+ P C
Sbjct: 703 FVDTIVPPC 711
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 1 YLDTMTPNCL 10
+L M+P CL
Sbjct: 226 WLQHMSPMCL 235
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 YLDTMTPNC 9
++DT+ P C
Sbjct: 703 FVDTIVPPC 711
>sp|NEF_HV1SC|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 YLDTMTPNCL 10
Y D +T CL
Sbjct: 203 YKDCLTSMCL 212
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 5 MTPNCL 10
+TP CL
Sbjct: 607 LTPKCL 612
52|Sequence|256|265|TPNCLYGLNL
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PTCVYGL 283
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 PNCLYGLNL 10
P C+YGL++
Sbjct: 277 PACVYGLSV 285
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 PNCLYG 7
P+CLYG
Sbjct: 240 PHCLYG 245
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 PNCLYGL 8
P C+YGL
Sbjct: 277 PACVYGL 283
>sp|VME1_CVHOC|MEMBRANE protein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 NCLYGLN 9
NC+Y LN
Sbjct: 73 NCVYALN 79
>sp|VME1_CVHN1|MEMBRANE protein|Human coronavirus HKU1 (isolate N1)
Query: 3 NCLYGLN 9
NC Y LN
Sbjct: 69 NCFYALN 75
>sp|VME1_CVHN5|MEMBRANE protein|Human coronavirus HKU1 (isolate N5)
Query: 3 NCLYGLN 9
NC Y LN
Sbjct: 69 NCFYALN 75
>sp|VME1_CVHN2|MEMBRANE protein|Human coronavirus HKU1 (isolate N2)
Query: 3 NCLYGLN 9
NC Y LN
Sbjct: 69 NCFYALN 75
>sp|GLYC_HRSV8|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 3 NCLYGLNL 10
+CLY LNL
Sbjct: 28 SCLYRLNL 35
>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 3 NCLYGLNL 10
+CLY LNL
Sbjct: 28 SCLYRLNL 35
>sp|GLYC_HRSVB|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 3 NCLYGLNL 10
+CLY LNL
Sbjct: 28 SCLYRLNL 35
>sp|GLYC_HRSV3|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 3 NCLYGLNL 10
+CLY LNL
Sbjct: 28 SCLYKLNL 35
>sp|GLYC_HRSV4|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 3 NCLYGLNL 10
+CLY LNL
Sbjct: 28 SCLYKLNL 35
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 2 PNCLYG 7
P C+YG
Sbjct: 277 PACVYG 282
>sp|GLYC_HRSV5|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 3 NCLYGLNL 10
+CLY LNL
Sbjct: 28 SCLYKLNL 35
>sp|GLYC_HRSVA|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 3 NCLYGLNL 10
+CLY LNL
Sbjct: 28 SCLYKLNL 35
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PNCLYGLN 9
P CL+G++
Sbjct: 169 PICLHGMD 176
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 TPNCLYGLNL 10
TP C LNL
Sbjct: 611 TPGCYRTLNL 620
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 TPNCLYGLNL 10
TP C LNL
Sbjct: 611 TPGCYRTLNL 620
>sp|GLYC_HRSV2|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 3 NCLYGLNL 10
+CLY LNL
Sbjct: 28 SCLYKLNL 35
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 TPNCLYGLNL 10
TP C LNL
Sbjct: 611 TPGCYRTLNL 620
>sp|GLYC_HRSV7|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 3 NCLYGLNL 10
+CLY LNL
Sbjct: 28 SCLYKLNL 35
>sp|GLYC_HRSV6|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 3 NCLYGLNL 10
+CLY LNL
Sbjct: 28 SCLYKLNL 35
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 PNCLYGLNL 10
P C YG L
Sbjct: 1176 PKCAYGRAL 1184
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 PNCLYGLNL 10
P C YG L
Sbjct: 1176 PKCAYGRAL 1184
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 PNCLYGLNL 10
P C YG L
Sbjct: 1176 PKCAYGRAL 1184
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 PNCLYGLNL 10
P C YG L
Sbjct: 1176 PKCAYGRAL 1184
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 PNCLYGLNL 10
P C YG L
Sbjct: 1176 PKCAYGRAL 1184
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 PNCLYGLNL 10
P C YG L
Sbjct: 1176 PKCAYGRAL 1184
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 PNCLYGLNL 10
P C YG L
Sbjct: 1176 PKCAYGRAL 1184
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 PNCLYGLNL 10
P C YG L
Sbjct: 1176 PKCAYGRAL 1184
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 PNCLYG 7
P CL+G
Sbjct: 574 PGCLHG 579
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 PNCLYG 7
P CL+G
Sbjct: 574 PGCLHG 579
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 2 PNCLYG 7
PN LYG
Sbjct: 196 PNILYG 201
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 TPNCLYGL 8
TP+C Y L
Sbjct: 311 TPDCTYYL 318
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 PNCLYGLNL 10
P C YG L
Sbjct: 1176 PRCAYGRAL 1184
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PNCLYGLN 9
P C YG++
Sbjct: 270 PTCPYGVD 277
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PNCLYGLN 9
P C YG++
Sbjct: 270 PTCPYGVD 277
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 TPNCLY 6
TP C Y
Sbjct: 978 TPKCFY 983
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 2 PNCLYG 7
P CL+G
Sbjct: 59 PKCLFG 64
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 NCLYGLNL 10
NC YG+ +
Sbjct: 1115 NCWYGVEV 1122
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 TPNCLY 6
TP CL+
Sbjct: 608 TPKCLF 613
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 3 NCLYG 7
NC+YG
Sbjct: 1070 NCVYG 1074
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 3 NCLYGL 8
NC++GL
Sbjct: 146 NCIFGL 151
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 1 TPNCLYGL 8
TP CL L
Sbjct: 126 TPRCLVDL 133
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1877 YGLNL 1881
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1889 YGLNL 1893
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1887 YGLNL 1891
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1879 YGLNL 1883
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1879 YGLNL 1883
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1870 YGLNL 1874
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1869 YGLNL 1873
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1873 YGLNL 1877
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 6 YGLNL 10
YGLNL
Sbjct: 1869 YGLNL 1873
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1882 YGLNL 1886
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1880 YGLNL 1884
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1881 YGLNL 1885
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1871 YGLNL 1875
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1870 YGLNL 1874
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 6 YGLNL 10
YGLNL
Sbjct: 1871 YGLNL 1875
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 6 YGLNL 10
YGLNL
Sbjct: 1871 YGLNL 1875
53|Sequence|261|270|YGLNLTSLSI
***** No hits found ******
54|Sequence|266|275|TSLSITHCNL
>sp|PG107_VACCC|PROTEIN H2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TSLSITHCNL 10
T+LS+ CNL
Sbjct: 4 TTLSVNACNL 13
>sp|H2_VACCA|LATE protein H2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TSLSITHCNL 10
T+LS+ CNL
Sbjct: 4 TTLSVNACNL 13
>sp|PG107_VAR67|LATE protein H2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 TSLSITHCNL 10
T+LS+ CNL
Sbjct: 4 TTLSVNACNL 13
>sp|PG107_MONPV|MPXVGP092 virus (MPXV)
Query: 1 TSLSITHCNL 10
T+LS+ CNL
Sbjct: 4 TTLSVNACNL 13
>sp|H2_VARV|LATE protein H2|Variola virus
Query: 1 TSLSITHCNL 10
T+LS+ CNL
Sbjct: 4 TTLSVNACNL 13
>sp|YVBD_VACCC|UNCHARACTERIZED 7.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SLSITHC 8
S+SITHC
Sbjct: 22 SVSITHC 28
>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)
Query: 1 TSLSITHC 8
TSL IT+C
Sbjct: 95 TSLVITYC 102
>sp|PG144_VARV|VIRION membrane protein OPG144 precursor|Variola virus
Query: 1 TSLSITHC 8
TSL IT+C
Sbjct: 94 TSLVITYC 101
>sp|PG144_VAR67|VIRION membrane protein OPG144 precursor|Variola virus (isolate
Query: 1 TSLSITHC 8
TSL IT+C
Sbjct: 94 TSLVITYC 101
>sp|PG144_VACCC|VIRION membrane protein OPG144 precursor|Vaccinia virus (strain
Query: 1 TSLSITHC 8
TSL IT+C
Sbjct: 94 TSLVITYC 101
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 SITHCN 9
ITHCN
Sbjct: 1152 QITHCN 1157
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 LSITHC 8
LSI HC
Sbjct: 1287 LSIIHC 1292
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 LSITHC 8
LSI HC
Sbjct: 1287 LSIIHC 1292
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 LSITHC 8
LSI HC
Sbjct: 1287 LSIIHC 1292
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 1 TSLSITHC 8
T LS+T+C
Sbjct: 171 TFLSVTYC 178
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 5 ITHCN 9
+THCN
Sbjct: 1153 LTHCN 1157
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 LSITHCNL 10
+ I HCN+
Sbjct: 1361 VKIRHCNI 1368
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 5 ITHCN 9
+THCN
Sbjct: 1174 LTHCN 1178
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 2 SLSITHCNL 10
L I HC+L
Sbjct: 55 KLVIKHCDL 63
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate
Query: 2 SLSITHCNL 10
L I HC+L
Sbjct: 52 KLVIKHCDL 60
55|Sequence|271|280|THCNLTAVPY
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 THCNLTAVPY 10
+ CN T++PY
Sbjct: 93 SQCNFTSLPY 102
>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain
Query: 3 CNLTAVP 9
CNLT VP
Sbjct: 284 CNLTGVP 290
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 HCNLTAVP 9
HCN+T P
Sbjct: 708 HCNVTDGP 715
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 THCNLTAVPY 10
+H NLTA Y
Sbjct: 82 SHINLTAKQY 91
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 1 THCNLTAVPY 10
+H NLTA Y
Sbjct: 82 SHINLTAKQY 91
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCNLT 6
HCNL+
Sbjct: 329 HCNLS 333
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCNLTAVPY 10
HCNL+ +
Sbjct: 325 HCNLSKTQW 333
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCNLT 6
HCNL+
Sbjct: 334 HCNLS 338
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 2 HCNLTAVPY 10
H NLTA Y
Sbjct: 83 HINLTAKQY 91
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCNLT 6
HCNL+
Sbjct: 342 HCNLS 346
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 2 HCNLTAVPY 10
H NLTA Y
Sbjct: 83 HINLTAKQY 91
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 CNLTAV 8
CN+TAV
Sbjct: 272 CNITAV 277
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 HCNLT 6
HCN+T
Sbjct: 692 HCNVT 696
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCNLTAV 8
+CN TAV
Sbjct: 187 NCNTTAV 193
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCNLTAV 8
+CN TAV
Sbjct: 188 NCNTTAV 194
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 3 CNLTAVP 9
C++TA+P
Sbjct: 232 CSVTAIP 238
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 3 CNLTAVP 9
C++TA+P
Sbjct: 232 CSVTAIP 238
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 HCNLTAVPY 10
+CN PY
Sbjct: 611 NCNFNLCPY 619
56|Sequence|276|285|TAVPYLAVRH
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 YLAVRH 10
Y+A+RH
Sbjct: 599 YVAIRH 604
57|Sequence|281|290|LAVRHLVYLR
>sp|E434_ADE02|EARLY 4 ORF6 protein|Human adenovirus C serotype 2
Query: 4 RHLVYLR 10
RHL+YLR
Sbjct: 184 RHLIYLR 190
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 AVRHLVY 8
AV HLVY
Sbjct: 402 AVEHLVY 408
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AVRHLVY 8
AV HLVY
Sbjct: 402 AVEHLVY 408
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 AVRHLVY 8
AV HLVY
Sbjct: 402 AVEHLVY 408
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 RHLVYLR 10
+HLVY R
Sbjct: 426 QHLVYFR 432
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 RHLVYLR 10
+HLVY R
Sbjct: 426 QHLVYFR 432
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 RHLVYLR 10
+HLVY R
Sbjct: 426 QHLVYFR 432
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 VRHLVY 8
+RH+VY
Sbjct: 2423 IRHIVY 2428
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 VRHLVY 8
+RH+VY
Sbjct: 2443 IRHIVY 2448
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 VRHLVY 8
+RH+VY
Sbjct: 2473 IRHIVY 2478
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 VRHLVY 8
+RH+VY
Sbjct: 2423 IRHIVY 2428
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 VRHLVY 8
+RH+VY
Sbjct: 2443 IRHIVY 2448
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 VRHLVY 8
+RH+VY
Sbjct: 2473 IRHIVY 2478
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 RHLVYLR 10
+HL+Y R
Sbjct: 426 QHLIYFR 432
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LAVRHLVYL 9
L+ +H+VY+
Sbjct: 5362 LSYKHIVYV 5370
>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9
Query: 4 RHLVYLR 10
RHL+Y R
Sbjct: 174 RHLIYCR 180
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 4 RHLVYLR 10
RH +Y+R
Sbjct: 175 RHFIYIR 181
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 5 HLVYL 9
HLVYL
Sbjct: 1802 HLVYL 1806
58|Sequence|286|295|LVYLRFLNLS
>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)
Query: 3 YLRFLNLS 10
+L+FLNLS
Sbjct: 34 WLKFLNLS 41
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 LVYLRFL 7
+VYLRF+
Sbjct: 30 VVYLRFV 36
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 YLRFLN 8
Y++FLN
Sbjct: 761 YMKFLN 766
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 YLRFLN 8
Y++FLN
Sbjct: 755 YMKFLN 760
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YLRFLN 8
Y++FLN
Sbjct: 755 YMKFLN 760
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 YLRFLN 8
Y++FLN
Sbjct: 755 YMKFLN 760
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 LVYLRFLNL 9
L+YL FL++
Sbjct: 4 LLYLAFLSI 12
>sp|VU25_HHV6Z|PROTEIN U25|Human herpesvirus 6B (strain Z29)
Query: 2 VYLRFLNLS 10
++RF NLS
Sbjct: 170 TFVRFCNLS 178
>sp|VU25_HHV6H|PROTEIN U25|Human herpesvirus 6B (HHV-6 variant
Query: 2 VYLRFLNLS 10
++RF NLS
Sbjct: 170 TFVRFCNLS 178
>sp|VU25_HHV6U|PROTEIN U25|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VYLRFLNLS 10
++RF NLS
Sbjct: 170 TFVRFCNLS 178
>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain
Query: 1 LVYLRFLN 8
++Y R+LN
Sbjct: 150 VLYFRYLN 157
59|Sequence|291|300|FLNLSYNPIS
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 FLNLSYNPIS 10
F+N++Y P S
Sbjct: 200 FINVAYGPAS 209
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 FLNLSYNPIS 10
F++ SY PIS
Sbjct: 1147 FMHFSYKPIS 1156
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 LNLSYNPI 9
L LSYNPI
Sbjct: 461 LVLSYNPI 468
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 2 LNLSYNPI 9
L LSYNPI
Sbjct: 461 LVLSYNPI 468
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 LNLSYNPI 9
L LSYNPI
Sbjct: 461 LVLSYNPI 468
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 NLSYNP 8
NLS+NP
Sbjct: 1949 NLSFNP 1954
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 2 LNLSYNPIS 10
+ LS+NP++
Sbjct: 222 VRLSFNPVN 230
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 LNLSYNPIS 10
L L Y P+S
Sbjct: 207 LTLDYKPLS 215
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 LNLSYNPIS 10
L L Y P+S
Sbjct: 207 LTLDYKPLS 215
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 2 LNLSYNPIS 10
+N+S NP+S
Sbjct: 404 VNVSENPLS 412
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 LNLSYNPIS 10
L L Y P+S
Sbjct: 207 LTLDYKPLS 215
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 1 FLNLSYNPI 9
FL+++ NP+
Sbjct: 846 FLHMNLNPL 854
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 6 YNPIS 10
YNPIS
Sbjct: 690 YNPIS 694
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 YNPIS 10
YNPIS
Sbjct: 690 YNPIS 694
60|Sequence|296|305|YNPISTIEGS
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 PISTIEGS 10
PIST++GS
Sbjct: 1162 PISTLKGS 1169
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 PISTIEGS 10
PIST++GS
Sbjct: 1162 PISTLKGS 1169
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 PISTIEGS 10
PIST++GS
Sbjct: 1161 PISTLKGS 1168
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 PISTIEGS 10
PIST++GS
Sbjct: 1161 PISTLKGS 1168
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 PISTIEGS 10
PIST++GS
Sbjct: 1158 PISTLKGS 1165
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 PISTIEGS 10
P++ IEGS
Sbjct: 553 PVANIEGS 560
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 PISTIEGS 10
P++ IEGS
Sbjct: 553 PVANIEGS 560
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 PISTIEGS 10
PIST++GS
Sbjct: 1161 PISTLKGS 1168
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 PISTIEGS 10
PIST++GS
Sbjct: 1159 PISTLKGS 1166
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 YNPISTIEG 9
Y+PIST +G
Sbjct: 286 YSPISTSKG 294
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 3 PISTIEGS 10
P+++IEG+
Sbjct: 552 PVASIEGT 559
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 PISTIEGS 10
P+++IEG+
Sbjct: 552 PVASIEGT 559
>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41
Query: 1 YNPISTIEG 9
Y+PIS EG
Sbjct: 180 YSPISDAEG 188
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 NPISTIEGS 10
NP+ST G+
Sbjct: 55 NPLSTTRGA 63
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 NPISTIEGS 10
NP+ST G+
Sbjct: 55 NPLSTTRGA 63
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NPISTIEGS 10
NP+ST G+
Sbjct: 55 NPLSTTRGA 63
>sp|E1A_ADE40|EARLY E1A protein|Human adenovirus F serotype 40
Query: 1 YNPISTIEG 9
Y+PIS EG
Sbjct: 175 YSPISDAEG 183
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NPISTIEGS 10
NP+ST G+
Sbjct: 55 NPLSTTRGA 63
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 2 NPISTIEGS 10
NP+ST G+
Sbjct: 55 NPLSTTRGA 63
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 PISTIEGS 10
P+ST++GS
Sbjct: 1155 PLSTLKGS 1162
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 PISTIEGS 10
P+ST++GS
Sbjct: 1161 PLSTLKGS 1168
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 PISTIEGS 10
P+ST++GS
Sbjct: 1161 PLSTLKGS 1168
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 PISTIEGS 10
P+ST++GS
Sbjct: 1161 PLSTLKGS 1168
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate
Query: 2 NPISTIEGS 10
NP+ST G+
Sbjct: 55 NPLSTTRGA 63
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 NPISTIEG 9
NPI +EG
Sbjct: 449 NPIELVEG 456
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 NPISTIEG 9
NPI +EG
Sbjct: 449 NPIELVEG 456
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 NPISTIEG 9
NPI +EG
Sbjct: 449 NPIELVEG 456
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ISTIEGS 10
+ST+EGS
Sbjct: 47 VSTLEGS 53
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ISTIEGS 10
+ST+EGS
Sbjct: 47 VSTLEGS 53
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 NPISTIE 8
NP STIE
Sbjct: 82 NPNSTIE 88
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 NPISTIE 8
NP STIE
Sbjct: 82 NPNSTIE 88
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 NPISTIE 8
NP STIE
Sbjct: 82 NPNSTIE 88
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 NPISTIEG 9
NPI +EG
Sbjct: 449 NPIDFVEG 456
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 NPISTIEG 9
NPI +EG
Sbjct: 449 NPIEFVEG 456
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 2 NPISTIEG 9
NPI +EG
Sbjct: 449 NPIEFVEG 456
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 2 NPISTIEG 9
NP+ +EG
Sbjct: 456 NPVELVEG 463
>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3
Query: 1 YNPISTIEGS 10
Y PIST G+
Sbjct: 71 YAPISTRPGT 80
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PISTIEG 9
PI TI+G
Sbjct: 1381 PIETIKG 1387
61|Sequence|301|310|TIEGSMLHEL
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
IEG M+H+
Sbjct: 141 IEGQMVHQ 148
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 TIEGSMLHEL 10
T EG +HEL
Sbjct: 184 TAEGGEIHEL 193
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 2 IEGSMLHEL 10
+EG+ +HE+
Sbjct: 403 LEGAFIHEI 411
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 IEGSMLHEL 10
+EG+ +HE+
Sbjct: 404 LEGAFIHEI 412
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 134 IQGQMVHQ 141
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 134 IQGQMVHQ 141
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 141 IQGQMVHQ 148
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IEGSMLHE 9
I+G M+H+
Sbjct: 138 IQGQMVHQ 145
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 TIEGSMLHE 9
T +G M+H+
Sbjct: 139 TAQGQMVHQ 147
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 TIEGSMLHE 9
T +G M+H+
Sbjct: 139 TAQGQMVHQ 147
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 1 TIEGSMLHEL 10
+I+G + H+L
Sbjct: 216 SIQGPLAHDL 225
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 5 SMLHEL 10
SMLH+L
Sbjct: 2119 SMLHQL 2124
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 IEGSMLHEL 10
+EG LH+L
Sbjct: 2996 VEGEGLHKL 3004
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 IEGSMLHEL 10
+EG LH+L
Sbjct: 2999 VEGEGLHKL 3007
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 IEGSMLHEL 10
+EG LH+L
Sbjct: 2998 VEGEGLHKL 3006
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 IEGSMLHEL 10
+EG LH+L
Sbjct: 2996 VEGEGLHKL 3004
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 IEGSMLHEL 10
+EG LH+L
Sbjct: 2996 VEGEGLHKL 3004
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 IEGSMLH 8
+EG++LH
Sbjct: 216 LEGAVLH 222
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 IEGSMLH 8
+EG++LH
Sbjct: 216 LEGAVLH 222
62|Sequence|306|315|MLHELLRLQE
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 2 LHELLRLQ 9
+HELLRLQ
Sbjct: 190 IHELLRLQ 197
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 2 LHELLRLQ 9
+HELLRLQ
Sbjct: 190 IHELLRLQ 197
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 LHELLRLQ 9
+HELLRLQ
Sbjct: 190 IHELLRLQ 197
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 2 LHELLRLQ 9
+HELLRLQ
Sbjct: 190 IHELLRLQ 197
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 LHELLRLQ 9
+HELLRLQ
Sbjct: 190 IHELLRLQ 197
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 LHELLRLQ 9
+HELLRLQ
Sbjct: 190 IHELLRLQ 197
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 LHELLRLQ 9
+HELLRLQ
Sbjct: 190 IHELLRLQ 197
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 LHELLRLQ 9
+HELLRLQ
Sbjct: 190 IHELLRLQ 197
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 2 LHELLRLQ 9
+HELLRLQ
Sbjct: 190 IHELLRLQ 197
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 LHELLRLQ 9
+HELLRLQ
Sbjct: 190 IHELLRLQ 197
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 LHELLRLQ 9
+HELLRLQ
Sbjct: 190 IHELLRLQ 197
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 LHELLRLQ 9
+HELL+LQ
Sbjct: 190 IHELLKLQ 197
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 2 LHELLRLQ 9
+HELL+LQ
Sbjct: 190 IHELLKLQ 197
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 LHELLRLQE 10
+H+ LRLQE
Sbjct: 553 IHDALRLQE 561
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LHELLRLQE 10
LHE +RL E
Sbjct: 420 LHEQIRLSE 428
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LHELLRLQE 10
LHE +RL E
Sbjct: 420 LHEQIRLSE 428
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 HELLRLQE 10
H LL LQE
Sbjct: 2175 HNLLPLQE 2182
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 HELLRLQE 10
H LL LQE
Sbjct: 2175 HNLLPLQE 2182
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 HELLRLQE 10
H LL LQE
Sbjct: 2176 HNLLPLQE 2183
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 HELLRLQE 10
H LL LQE
Sbjct: 2136 HNLLPLQE 2143
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 HELLRLQE 10
H LL LQE
Sbjct: 2136 HNLLPLQE 2143
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 3 HELLRLQ 9
H LLRL+
Sbjct: 529 HRLLRLE 535
63|Sequence|311|320|LRLQEIQLVG
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 4 QEIQLVG 10
QEI LVG
Sbjct: 502 QEIPLVG 508
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 4 QEIQLVG 10
QEI LVG
Sbjct: 499 QEIPLVG 505
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 287 LRMDKLQLKG 296
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 567 LRMDKLQLKG 576
>sp|KITH_YMTV5|THYMIDINE kinase|Yaba monkey tumor virus (strain
Query: 4 QEIQLVG 10
QEI+++G
Sbjct: 157 QEIEIIG 163
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 287 LRMDKLQLKG 296
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 467 LRMDKLQLKG 476
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 567 LRMDKLQLKG 576
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 567 LRMDKLQLKG 576
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 567 LRMDKLQLKG 576
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 567 LRMDKLQLKG 576
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 567 LRMDKLQLKG 576
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 567 LRMDKLQLKG 576
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 567 LRMDKLQLKG 576
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 336 LRMDKLQLKG 345
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 LRLQEIQLVG 10
LR+ ++QL G
Sbjct: 287 LRMDKLQLKG 296
64|Sequence|316|325|IQLVGGQLAV
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QLVGGQLAV 10
QLV G LA+
Sbjct: 758 QLVDGLLAI 766
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 QLVGGQL 8
++VGGQ+
Sbjct: 658 EIVGGQI 664
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 QLVGGQL 8
++VGGQ+
Sbjct: 658 EIVGGQI 664
65|Sequence|321|330|GQLAVVEPYA
>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate
Query: 2 QLAVVEPY 9
Q+AV PY
Sbjct: 54 QIAVYTPY 61
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 GQLAVVEPY 9
G+L V PY
Sbjct: 640 GRLITVNPY 648
66|Sequence|326|335|VEPYAFRGLN
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 3 PYAFRG 8
PYA RG
Sbjct: 346 PYAIRG 351
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 3 PYAFRG 8
PYA RG
Sbjct: 346 PYAIRG 351
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 PYAFRG 8
P+AF+G
Sbjct: 1069 PWAFKG 1074
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 PYAFRG 8
P+AF+G
Sbjct: 1069 PWAFKG 1074
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VEPYAFRGLN 10
V+PY F+ N
Sbjct: 326 VDPYFFQMTN 335
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VEPYAFRGLN 10
V+PY F+ N
Sbjct: 326 VDPYFFQMTN 335
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VEPYAFRGLN 10
V+PY F+ N
Sbjct: 326 VDPYFFQMTN 335
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VEPYAFRGLN 10
V+PY F+ N
Sbjct: 326 VDPYFFQMTN 335
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VEPYAFRGLN 10
V+PY F+ N
Sbjct: 326 VDPYFFQMTN 335
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VEPYAFRGLN 10
V+PY F+ N
Sbjct: 326 VDPYFFQMTN 335
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VEPYAFRGLN 10
V+PY F+ N
Sbjct: 326 VDPYFFQMTN 335
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VEPYAFRGLN 10
V+PY F+ N
Sbjct: 326 VDPYFFQMTN 335
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VEPYAFRGLN 10
V+PY F+ N
Sbjct: 326 VDPYFFQMTN 335
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VEPYAFRGLN 10
V+PY F+ N
Sbjct: 326 VDPYFFQMTN 335
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VEPYAFRGLN 10
V+PY F+ N
Sbjct: 326 VDPYFFQMTN 335
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VEPYAFRGLN 10
V+PY F+ N
Sbjct: 305 VDPYFFQMTN 314
67|Sequence|331|340|FRGLNYLRVL
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 FRGLNYLRVL 10
F+GL Y+++L
Sbjct: 2748 FQGLGYVKLL 2757
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 FRGLNYLRVL 10
F+GL Y+++L
Sbjct: 2748 FQGLGYVKLL 2757
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 1 FRGLNYLRV 9
RGL +LR+
Sbjct: 240 LRGLKHLRI 248
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 FRGLNYL 7
FRGL Y+
Sbjct: 3697 FRGLTYV 3703
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 FRGLNYL 7
FRGL Y+
Sbjct: 3697 FRGLTYV 3703
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 RGLNY 6
RGLNY
Sbjct: 2050 RGLNY 2054
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 FRGLNYLRVL 10
++G++Y R L
Sbjct: 1790 YKGISYCRYL 1799
>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)
Query: 1 FRGLNYL 7
FR +NY+
Sbjct: 201 FRSINYM 207
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 FRGLNYL 7
F GL YL
Sbjct: 531 FHGLRYL 537
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 1 FRGLNYLRV 9
F GLN++ +
Sbjct: 191 FSGLNHIMI 199
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 1 FRGLNYLRV 9
F GLN++ +
Sbjct: 191 FSGLNHIMI 199
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 1 FRGLNYLRV 9
F GLN++ +
Sbjct: 191 FSGLNHIMI 199
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 1 FRGLNYLRV 9
F GLN++ +
Sbjct: 191 FSGLNHIMI 199
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 1 FRGLNYLRV 9
F GLN++ +
Sbjct: 191 FSGLNHIMI 199
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 1 FRGLNYLRV 9
F GLN++ +
Sbjct: 191 FSGLNHIMI 199
68|Sequence|336|345|YLRVLNVSGN
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 1 YLRVLNVSG 9
+ RVLN+SG
Sbjct: 278 FARVLNLSG 286
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 1 YLRVLNVSG 9
+ RVLN+SG
Sbjct: 278 FARVLNLSG 286
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 1 YLRVLNVSG 9
+ RVLN+SG
Sbjct: 278 FARVLNLSG 286
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 1 YLRVLNVSG 9
+ RVLN+SG
Sbjct: 278 FARVLNLSG 286
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 1 YLRVLNVSG 9
+ RVLN+SG
Sbjct: 278 FARVLNLSG 286
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 YLRVLNVSG 9
+ R+LN+SG
Sbjct: 296 FARLLNLSG 304
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 YLRVLNVSG 9
+ R+LN+SG
Sbjct: 296 FARLLNLSG 304
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 YLRVLNVSG 9
+ R+LN+SG
Sbjct: 296 FARLLNLSG 304
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 YLRVLNVSG 9
+ R+LN+SG
Sbjct: 296 FARLLNLSG 304
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 1 YLRVLNVSG 9
+ R+LN+SG
Sbjct: 296 FARLLNLSG 304
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 1 YLRVLNVSG 9
+ R+LN+SG
Sbjct: 296 FARLLNLSG 304
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 YLRVLNVSG 9
+ R+LN+SG
Sbjct: 296 FARLLNLSG 304
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 4 VLNVSGN 10
VLN+SG+
Sbjct: 1161 VLNISGS 1167
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 VLNVSGN 10
VLN+SG+
Sbjct: 1161 VLNISGS 1167
69|Sequence|341|350|NVSGNQLTTL
>sp|SCP_HHV8P|SMALL capsomere-interacting protein|Human herpesvirus 8 type P
Query: 2 VSGNQLTTL 10
VSG+ +TTL
Sbjct: 122 VSGSSITTL 130
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 VSGNQLTTL 10
+ GNQ+TT+
Sbjct: 1862 LKGNQITTI 1870
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 VSGNQLTTL 10
V+GN +TTL
Sbjct: 387 VTGNNMTTL 395
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 VSGNQLTTL 10
+ GNQ+TT+
Sbjct: 1871 LKGNQITTI 1879
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 VSGNQLTT 9
+ GNQ+TT
Sbjct: 1863 LKGNQITT 1870
>sp|UL60_HCMVA|UNCHARACTERIZED protein UL60|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NVSGNQLTT 9
N GN LTT
Sbjct: 65 NPRGNALTT 73
70|Sequence|346|355|QLTTLEESVF
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 QLTTLEESVF 10
Q +LEESVF
Sbjct: 1797 QPLSLEESVF 1806
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 TLEESVF 10
TLE+SVF
Sbjct: 1786 TLEDSVF 1792
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 TTLEESVF 10
TTLEE+ F
Sbjct: 1217 TTLEETKF 1224
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 TTLEESVF 10
TTLEE+ F
Sbjct: 1217 TTLEETKF 1224
71|Sequence|351|360|EESVFHSVGN
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 SVFHSVGN 10
+VFH GN
Sbjct: 1084 TVFHGAGN 1091
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 SVFHSVGN 10
+VFH GN
Sbjct: 1084 TVFHGAGN 1091
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1759 EPSVFHEV 1766
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1757 EPSVFHDV 1764
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1765 EPSVFHQV 1772
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 2 ESVFHSVGN 10
++VFH+V N
Sbjct: 232 DTVFHNVSN 240
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1757 EPSVFHDV 1764
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1757 EPSVFHDV 1764
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1757 EPSVFHDV 1764
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1757 EPSVFHQV 1764
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1751 EPSVFHQV 1758
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1749 EPSVFHQV 1756
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1757 EPSVFHDV 1764
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1749 EPSVFHQV 1756
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1749 EPSVFHQV 1756
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1760 EPSVFHQV 1767
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1748 EPSVFHQV 1755
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1746 EPSVFHQV 1753
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 4 VFHSVGN 10
V H+VGN
Sbjct: 321 VLHTVGN 327
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1757 EPSVFHQV 1764
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1779 EPSVFHHV 1786
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1759 EPSVFHQV 1766
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1767 EPSVFHQV 1774
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 SVFHSVGN 10
SV H +GN
Sbjct: 5893 SVIHDIGN 5900
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1748 EPSVFHQV 1755
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1755 EPSVFHQV 1762
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 ESVFHSVGN 10
++VFH V N
Sbjct: 2602 KTVFHPVNN 2610
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 ESVFHSVGN 10
++VFH V N
Sbjct: 2602 KTVFHPVNN 2610
>sp|MATRX_CHAV|MATRIX protein|Chandipura virus (strain I653514) (CHPV)
Query: 4 VFHSVG 9
VFHS+G
Sbjct: 144 VFHSLG 149
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1758 EPSVFHHV 1765
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 EESVFHSV 8
E SVFH V
Sbjct: 1747 EPSVFHHV 1754
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 SVFHSVGN 10
+V+H GN
Sbjct: 1084 TVYHGAGN 1091
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 SVFHSVGN 10
+V+H GN
Sbjct: 1084 TVYHGAGN 1091
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 SVFHSVGN 10
+V+H GN
Sbjct: 1084 TVYHGAGN 1091
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 SVFHSVGN 10
+V+H GN
Sbjct: 1084 TVYHGAGN 1091
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 SVFHSVG 9
SVF S+G
Sbjct: 321 SVFQSIG 327
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 SVFHSV 8
S+FHSV
Sbjct: 1814 SLFHSV 1819
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 SVFHSV 8
S+FHSV
Sbjct: 1814 SLFHSV 1819
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 EESVFH 6
E+S+FH
Sbjct: 1875 EQSIFH 1880
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 VFHSVGN 10
V H +GN
Sbjct: 6253 VLHDIGN 6259
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 VFHSVGN 10
V H +GN
Sbjct: 6230 VLHDIGN 6236
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 1 EESVFHSVGN 10
E+SV ++ GN
Sbjct: 159 EDSVNYATGN 168
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 EESVFHSV 8
+ SVFH V
Sbjct: 1730 QPSVFHDV 1737
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 1 EESVFHSVGN 10
EES HSV N
Sbjct: 341 EESPPHSVVN 350
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EESVFHSVGN 10
EES HSV N
Sbjct: 341 EESPPHSVVN 350
72|Sequence|356|365|HSVGNLETLI
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 3 VGNLET 8
VGNLET
Sbjct: 286 VGNLET 291
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 4 GNLETLI 10
GN ETLI
Sbjct: 5 GNCETLI 11
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GNLETLI 10
GN ETLI
Sbjct: 5 GNCETLI 11
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 4 GNLETLI 10
GN+ET+I
Sbjct: 60 GNVETII 66
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 4 GNLETLI 10
GN+ET+I
Sbjct: 60 GNVETII 66
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 HSVGNLETL 9
H + NL++L
Sbjct: 491 HGINNLDSL 499
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 HSVGNLETL 9
H + NL++L
Sbjct: 491 HGINNLDSL 499
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 4 GNLETL 9
GNL+TL
Sbjct: 346 GNLQTL 351
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 341 GNLQTL 346
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 4 GNLETL 9
GNL+TL
Sbjct: 340 GNLQTL 345
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 4 GNLETL 9
GNL+TL
Sbjct: 339 GNLQTL 344
>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 11 GNLQTL 16
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 11 GNLQTL 16
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 HSVGNLETLI 10
++VG L+T+I
Sbjct: 463 NAVGTLDTVI 472
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 HSVGNLETLI 10
++VG L+T+I
Sbjct: 463 NAVGTLDTVI 472
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 4 GNLETL 9
GNL+TL
Sbjct: 347 GNLQTL 352
73|Sequence|361|370|LETLILDSNP
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 4 LILDSNP 10
L++DSNP
Sbjct: 752 LVMDSNP 758
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ETLILDSNP 10
+TL++ SNP
Sbjct: 321 QTLLVQSNP 329
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ETLILDSNP 10
+TL++ SNP
Sbjct: 321 QTLLVQSNP 329
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 2 ETLILDSNP 10
ET+I DS P
Sbjct: 621 ETIICDSEP 629
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 2 ETLILDSNP 10
ET+I DS P
Sbjct: 621 ETIICDSEP 629
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 2 ETLILDSNP 10
ET+I DS P
Sbjct: 620 ETIICDSEP 628
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 2 ETLILDSNP 10
ET+I DS P
Sbjct: 620 ETIICDSEP 628
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 4 LILDSN 9
LILDSN
Sbjct: 244 LILDSN 249
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 TLILDSNP 10
T+I +SNP
Sbjct: 2496 TIIRNSNP 2503
>sp|SHDAG_HDVP1|SMALL delta antigen|Hepatitis delta virus genotype III
Query: 2 ETLILDSNP 10
ET+ +DS P
Sbjct: 76 ETMEVDSGP 84
>sp|LHDAG_HDVP1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 2 ETLILDSNP 10
ET+ +DS P
Sbjct: 76 ETMEVDSGP 84
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 2 ETLILDSNP 10
ETL LDS P
Sbjct: 295 ETLSLDSIP 303
74|Sequence|366|375|LDSNPLACDC
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 4 NPLACD 9
NPL+CD
Sbjct: 470 NPLSCD 475
>sp|US32_HCMVA|UNCHARACTERIZED protein HHRF7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DSNPLACDC 10
DS+ L CDC
Sbjct: 18 DSHGLWCDC 26
>sp|US32_HCMVM|PROTEIN US32|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DSNPLACDC 10
DS+ L CDC
Sbjct: 18 DSHGLWCDC 26
>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19
Query: 1 LDSNPLACD 9
+D NPLA D
Sbjct: 404 IDENPLAED 412
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 1 LDSNPLACD 9
+D NPLA D
Sbjct: 404 VDENPLAED 412
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 1 LDSNPLACD 9
+D NP+ CD
Sbjct: 58 MDLNPVLCD 66
>sp|IR04_HCMVA|UNCHARACTERIZED protein IRL4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 NPLACDC 10
NP C C
Sbjct: 147 NPQGCSC 153
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 1 LDSNPL 6
+DSNPL
Sbjct: 754 MDSNPL 759
>sp|PAX_I57A3|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 LDSNPLA 7
+DSNP A
Sbjct: 234 MDSNPTA 240
>sp|PAX_I57A2|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 LDSNPLA 7
+DSNP A
Sbjct: 234 MDSNPTA 240
>sp|PAX_I57A1|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 LDSNPLA 7
+DSNP A
Sbjct: 234 MDSNPTA 240
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 LDSNPLACDC 10
LD N ++ DC
Sbjct: 500 LDGNVVSVDC 509
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 DSNPLAC 8
D+N LAC
Sbjct: 119 DTNKLAC 125
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LDSNPLACD 9
LD NPL D
Sbjct: 87 LDMNPLGSD 95
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 3 SNPLACD 9
S+P+ CD
Sbjct: 258 SDPVGCD 264
>sp|VE8E2_HPV54|PROTEIN E8^E2C|Human papillomavirus type 54
Query: 3 SNPLACD 9
S+P+ CD
Sbjct: 66 SDPVGCD 72
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 1 LDSNPLACD 9
+D NPL+ D
Sbjct: 406 VDENPLSED 414
>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14
Query: 1 LDSNPLACD 9
+D NPL+ D
Sbjct: 405 VDENPLSED 413
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 3 SNPLACD 9
S P+ACD
Sbjct: 113 SLPVACD 119
>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P
Query: 1 LDSNPLACDC 10
L+S P DC
Sbjct: 135 LESEPPTADC 144
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 LDSNPLACDC 10
+ S P+ DC
Sbjct: 599 ITSTPIVVDC 608
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DSNPLACD 9
DS+ ++CD
Sbjct: 105 DSSEVSCD 112
>sp|ORF3_TTVG1|UNCHARACTERIZED ORF3 protein|Torque teno midi virus 1
Query: 2 DSNPLACDC 10
DS+ CDC
Sbjct: 30 DSHDSWCDC 38
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 2 DSNPLAC 8
D+N LAC
Sbjct: 119 DTNKLAC 125
75|Sequence|371|380|LACDCRLLWV
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 ACDCRLLW 9
AC C+ LW
Sbjct: 462 ACLCQYLW 469
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 ACDCRLLW 9
AC C+ LW
Sbjct: 462 ACLCQYLW 469
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 ACDCRLLW 9
AC C+ LW
Sbjct: 463 ACLCQYLW 470
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 ACDCRLLW 9
AC C+ LW
Sbjct: 463 ACLCQYLW 470
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 ACDCRLLW 9
AC C+ LW
Sbjct: 463 ACLCQYLW 470
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 2 ACDCRLLWV 10
ACD ++WV
Sbjct: 124 ACDFLVIWV 132
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 2 ACDCRLLWV 10
ACD ++WV
Sbjct: 124 ACDFLVIWV 132
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 2 ACDCRLLWV 10
ACD ++WV
Sbjct: 124 ACDFLVIWV 132
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 ACDCRLLWV 10
ACD ++WV
Sbjct: 124 ACDFLVIWV 132
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 2 ACDCRLLWV 10
ACD ++WV
Sbjct: 124 ACDFLVIWV 132
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 ACDCRLLWV 10
ACD ++WV
Sbjct: 124 ACDFLVIWV 132
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 2 ACDCRLLWV 10
ACD ++WV
Sbjct: 124 ACDFLVIWV 132
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 1 LACDCRLLWV 10
L C CRLL V
Sbjct: 60 LHCLCRLLKV 69
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 1 LACDCRLLWV 10
L C CRLL V
Sbjct: 60 LHCLCRLLKV 69
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 1 LACDCRLL 8
L DCRLL
Sbjct: 437 LQSDCRLL 444
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LACDCRLL 8
L DCRLL
Sbjct: 721 LQSDCRLL 728
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 2 ACDCRLLWV 10
ACD ++WV
Sbjct: 123 ACDFLVVWV 131
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 2 ACDCRLLW 9
ACD RLL+
Sbjct: 197 ACDPRLLF 204
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 LACDCRLLW 9
L C R++W
Sbjct: 1660 LCCSARMVW 1668
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 LACDCRLLW 9
L C R++W
Sbjct: 1660 LCCSARMVW 1668
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 2 ACDCRLLW 9
AC C LW
Sbjct: 465 ACLCLYLW 472
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 4 DCRLL 8
DCRLL
Sbjct: 1462 DCRLL 1466
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LACDC 5
+ACDC
Sbjct: 86 IACDC 90
>sp|BDLF3_EBVB9|GLYCOPROTEIN BDLF3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LACDCRLLW 9
L C+ L+W
Sbjct: 16 LICETSLIW 24
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 LACDCRLL 8
L CDC L
Sbjct: 263 LPCDCDWL 270
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 1 LACDCRLL 8
L CDC L
Sbjct: 225 LPCDCDWL 232
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 LACDCRLL 8
L CDC L
Sbjct: 260 LPCDCDWL 267
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 LACDCRLL 8
L CDC L
Sbjct: 288 LPCDCDWL 295
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 LACDCRLL 8
L CDC L
Sbjct: 288 LPCDCDWL 295
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 LACDCRLL 8
L+C CR+
Sbjct: 669 LSCICRIF 676
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 LACDCRLL 8
L+C CR+
Sbjct: 669 LSCICRIF 676
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 LACDCRLL 8
L+C CR+
Sbjct: 669 LSCICRIF 676
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 LACDCRLL 8
L+C CR+
Sbjct: 669 LSCICRIF 676
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 LACDCRLL 8
L+C CR+
Sbjct: 669 LSCICRIF 676
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 LACDCRLL 8
L C C+LL
Sbjct: 668 LLCVCKLL 675
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 LACDCRLL 8
L C C+LL
Sbjct: 668 LLCVCKLL 675
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 LACDCRLL 8
L C C+LL
Sbjct: 668 LLCVCKLL 675
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 5 CRLLWV 10
C L+WV
Sbjct: 1220 CLLVWV 1225
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 5 CRLLWV 10
C L+WV
Sbjct: 1220 CLLVWV 1225
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LACDCRLLW 9
LA CR LW
Sbjct: 824 LAGACRGLW 832
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 2 ACDC 5
ACDC
Sbjct: 88 ACDC 91
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 CDCRLLWV 10
CD +WV
Sbjct: 190 CDVEEVWV 197
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LACDC 5
++CDC
Sbjct: 1132 MSCDC 1136
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 2 ACDCRLLWV 10
ACD RL+ V
Sbjct: 1049 ACDRRLIVV 1057
76|Sequence|376|385|RLLWVFRRRW
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 LWVFRR 8
LW FR+
Sbjct: 420 LWAFRK 425
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 LWVFRR 8
LW FR+
Sbjct: 420 LWAFRK 425
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 LWVFRR 8
LW FR+
Sbjct: 420 LWAFRK 425
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 WVFRRRW 10
W F R+W
Sbjct: 1586 WKFDRKW 1592
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 206 WLVHRQW 212
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 206 WLVHRQW 212
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 WVFRRRW 10
W F R+W
Sbjct: 1587 WRFDRKW 1593
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 3 LWVFRRRW 10
+W F +W
Sbjct: 316 VWYFEDKW 323
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 WVFRRRW 10
W F R+W
Sbjct: 1587 WRFDRKW 1593
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 WVFRRRW 10
W F R+W
Sbjct: 1587 WRFDRKW 1593
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 WVFRRRW 10
W F R+W
Sbjct: 1587 WRFDRKW 1593
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 255 WLVHRQW 261
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 4 WVFRR 8
W+F+R
Sbjct: 148 WIFKR 152
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 4 WVFRR 8
W+F+R
Sbjct: 148 WIFKR 152
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 LWVFRRR 9
LW FR +
Sbjct: 421 LWAFRTK 427
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 LWVFRRR 9
LW FR +
Sbjct: 421 LWAFRTK 427
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 386 WLVHRQW 392
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 RLLWV 5
RLLWV
Sbjct: 1250 RLLWV 1254
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 RLLWV 5
RLLWV
Sbjct: 1250 RLLWV 1254
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 RLLWV 5
RLLWV
Sbjct: 1250 RLLWV 1254
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 RLLWV 5
RLLWV
Sbjct: 1250 RLLWV 1254
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 RLLWV 5
RLLWV
Sbjct: 1250 RLLWV 1254
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 488 WIVDRQW 494
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 486 WLVHRQW 492
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 206 WLVHRQW 212
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 488 WIVDRQW 494
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 488 WIVDRQW 494
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 488 WIVDRQW 494
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 488 WIVDRQW 494
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 488 WIVDRQW 494
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 488 WIVDRQW 494
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 488 WIVDRQW 494
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 488 WIVDRQW 494
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 4 WVFRR 8
W+FR+
Sbjct: 388 WIFRK 392
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 WVFRRRW 10
W+ R+W
Sbjct: 488 WIVDRQW 494
77|Sequence|381|390|FRRRWRLNFN
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FRRRWR 6
+RRRWR
Sbjct: 234 YRRRWR 239
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FRRRWR 6
+RRRWR
Sbjct: 235 YRRRWR 240
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FRRRWR 6
+RRRWR
Sbjct: 235 YRRRWR 240
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 RRRWRLNFN 10
++RW +N+N
Sbjct: 395 KKRWSVNYN 403
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 FRRRWRLN 8
+RRRW N
Sbjct: 6 YRRRWYSN 13
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 WRLNFN 10
WR+ FN
Sbjct: 2214 WRMKFN 2219
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 WRLNFN 10
WR+ FN
Sbjct: 2214 WRMKFN 2219
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 FRRRWR 6
+RRWR
Sbjct: 65 LKRRWR 70
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RRRWRL 7
+RRW+L
Sbjct: 164 QRRWKL 169
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RRRWRL 7
+RRW+L
Sbjct: 164 QRRWKL 169
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RRRWRL 7
+RRW+L
Sbjct: 164 QRRWKL 169
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 FRRRWRLNF 9
F RR LNF
Sbjct: 511 FNRRLLLNF 519
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FRRRWRL 7
RRRWRL
Sbjct: 42 IRRRWRL 48
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FRRRWRL 7
RRRWRL
Sbjct: 42 IRRRWRL 48
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 RRRWRLNFN 10
RR++ LNF+
Sbjct: 263 RRQYLLNFD 271
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 5 WRLNFN 10
WR NF+
Sbjct: 2259 WRYNFD 2264
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 WRLNFN 10
WR NF+
Sbjct: 2259 WRYNFD 2264
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 RRRWRLNFN 10
RR++ LNF+
Sbjct: 263 RRQYLLNFD 271
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 FRRRWRLNF 9
F RR LNF
Sbjct: 512 FNRRLLLNF 520
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 FRRRWRLNF 9
F RR LNF
Sbjct: 512 FNRRLLLNF 520
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 FRRRWRLNF 9
F RR LNF
Sbjct: 512 FNRRLLLNF 520
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 FRRRWRLNF 9
++ +W +NF
Sbjct: 446 YKAKWVMNF 454
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FRRRWR 6
++RRW+
Sbjct: 688 YQRRWK 693
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 FRRRWRLNF 9
F RR LNF
Sbjct: 510 FNRRLLLNF 518
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 FRRRWRLNF 9
F RR LNF
Sbjct: 510 FNRRLLLNF 518
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 RRRWRLNF 9
R+RWR N+
Sbjct: 169 RKRWRSNY 176
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 RRRWRLNFN 10
R W +NF+
Sbjct: 1859 RVAWEMNFD 1867
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 3 RRWRLNFN 10
R WR+N N
Sbjct: 167 RIWRINMN 174
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FRRRWR 6
++RRW+
Sbjct: 687 YQRRWK 692
>sp|US20_HCMVM|MEMBRANE protein US20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RRRWR 6
RRRW+
Sbjct: 140 RRRWK 144
>sp|VE4_HPV47|PROTEIN E4|Human papillomavirus 47
Query: 4 RWRLNFN 10
RW NF+
Sbjct: 203 RWESNFD 209
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 FRRRW 5
FR RW
Sbjct: 1234 FRNRW 1238
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 RRRWR 6
RRRW+
Sbjct: 228 RRRWK 232
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RRRWR 6
RRRW+
Sbjct: 228 RRRWK 232
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 RWRLNF 9
+W +NF
Sbjct: 658 KWEINF 663
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 FRRRWR 6
F+R WR
Sbjct: 571 FKRLWR 576
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 FRRRWRLNFN 10
F R+W+ + +
Sbjct: 112 FERKWKADMS 121
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 5 WRLNF 9
W+LNF
Sbjct: 413 WQLNF 417
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 5 WRLNF 9
W+LNF
Sbjct: 413 WQLNF 417
78|Sequence|386|395|RLNFNRQQPT
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 1 RLNFNRQQPT 10
R+ F+R +PT
Sbjct: 50 RVTFHRVKPT 59
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 RLNFNRQQPT 10
R+ F+R +PT
Sbjct: 51 RVTFHRVKPT 60
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 RLNFNRQQPT 10
R F R+ PT
Sbjct: 1876 RKTFEREYPT 1885
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 RLNFNRQQPT 10
R F R+ PT
Sbjct: 1876 RKTFEREYPT 1885
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RLNFNRQQPT 10
R F R+ PT
Sbjct: 1876 RKTFEREYPT 1885
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 RLNFNRQQPT 10
R F R+ PT
Sbjct: 1876 RKTFEREYPT 1885
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 RLNFNRQQPT 10
R F R+ PT
Sbjct: 1876 RKTFEREYPT 1885
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 2 LNFNRQQPT 10
+NF++ +PT
Sbjct: 752 INFDQAKPT 760
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 2 LNFNRQQPT 10
+NF++ +PT
Sbjct: 751 INFDQAKPT 759
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 2 LNFNRQQPT 10
+NF++ +PT
Sbjct: 751 INFDQAKPT 759
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 LNFNRQQPT 10
+NF++ +PT
Sbjct: 751 INFDQAKPT 759
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 LNFNRQQPT 10
+NF++ +PT
Sbjct: 752 INFDQAKPT 760
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 LNFNRQQPT 10
+NF++ +PT
Sbjct: 751 INFDQAKPT 759
79|Sequence|391|400|RQQPTCATPE
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 4 PTCATPE 10
P C TPE
Sbjct: 26 PVCPTPE 32
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 4 PTCATPE 10
P C TPE
Sbjct: 26 PVCPTPE 32
>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RQQPTC 6
RQQP C
Sbjct: 219 RQQPVC 224
>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RQQPTC 6
RQQP C
Sbjct: 219 RQQPVC 224
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 2 QQPTCATPE 10
Q+PT A PE
Sbjct: 588 QKPTHALPE 596
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 3 QPTCATPE 10
+ TC+ PE
Sbjct: 541 KTTCSNPE 548
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 2 QQPTCATPE 10
Q P C PE
Sbjct: 27 QIPKCPDPE 35
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 2 QQPTCATPE 10
Q P C PE
Sbjct: 27 QIPKCPDPE 35
>sp|VE7_HPV42|PROTEIN E7|Human papillomavirus 42
Query: 4 PTCATP 9
PTC TP
Sbjct: 17 PTCETP 22
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 QQPTCATPE 10
Q CA PE
Sbjct: 359 HQSPCAIPE 367
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 QQPTCATPE 10
Q CA PE
Sbjct: 359 HQSPCAIPE 367
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 4 PTCATPE 10
PT TPE
Sbjct: 153 PTATTPE 159
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 4 PTCATPE 10
PT TPE
Sbjct: 153 PTATTPE 159
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 4 PTCATPE 10
PT TPE
Sbjct: 153 PTATTPE 159
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 4 PTCATPE 10
PT TPE
Sbjct: 153 PTATTPE 159
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 QPTCATPE 10
Q CA PE
Sbjct: 351 QSPCAMPE 358
80|Sequence|396|405|CATPEFVQGK
>sp|E4RF2_ADE02|EARLY 4 ORF2 protein|Human adenovirus C serotype 2
Query: 1 CATPEFVQ 8
C PEF+Q
Sbjct: 122 CEEPEFLQ 129
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 CATPEF 6
CA PEF
Sbjct: 363 CAIPEF 368
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 CATPEF 6
CA PEF
Sbjct: 363 CAIPEF 368
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 CATPEF 6
CA PEF
Sbjct: 363 CAIPEF 368
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 CATPEF 6
CA PEF
Sbjct: 363 CAIPEF 368
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 CATPEF 6
CA PEF
Sbjct: 364 CALPEF 369
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 CATPEF 6
CA PEF
Sbjct: 364 CALPEF 369
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 CATPEF 6
CA PEF
Sbjct: 353 CAMPEF 358
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 PEFVQGK 10
PEF+ GK
Sbjct: 2115 PEFLSGK 2121
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 CATPEF 6
CA PEF
Sbjct: 353 CAMPEF 358
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 CATPEF 6
CA PEF
Sbjct: 354 CAMPEF 359
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 1 CATPEFVQG 9
CA EF++G
Sbjct: 455 CALKEFLKG 463
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 CATPEFVQG 9
C TP V+G
Sbjct: 934 CGTPALVEG 942
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 CATPEFVQG 9
C TP V+G
Sbjct: 934 CGTPALVEG 942
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 CATPEFVQG 9
C TP V+G
Sbjct: 934 CGTPALVEG 942
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 CATPEFVQG 9
C TP V+G
Sbjct: 934 CGTPALVEG 942
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 CATPEFVQG 9
C TP V+G
Sbjct: 934 CGTPALVEG 942
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 CATPEFVQG 9
C TP V+G
Sbjct: 934 CGTPALVEG 942
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 CATPEFVQG 9
C TP V+G
Sbjct: 934 CGTPALVEG 942
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 CATPEFVQG 9
C TP V+G
Sbjct: 934 CGTPALVEG 942
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 CATPEFVQG 9
C TP V+G
Sbjct: 934 CGTPALVEG 942
>sp|PHOSP_ISFV|PHOSPHOPROTEIN virus (ISFV)
Query: 3 TPEFV 7
TPEFV
Sbjct: 285 TPEFV 289
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 1 CATPEFVQG 9
CA EF++G
Sbjct: 460 CAFKEFLKG 468
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 ATPEFV 7
ATPE++
Sbjct: 684 ATPEYI 689
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 CATPEF 6
CA P+F
Sbjct: 353 CAMPQF 358
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 CATPEFV 7
CA P FV
Sbjct: 218 CAPPGFV 224
>sp|C_HENDH|PROTEIN C|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 CATPEFVQ 8
C TPE Q
Sbjct: 85 CQTPELGQ 92
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 1 CATPEFVQG 9
CA F+QG
Sbjct: 468 CALKSFLQG 476
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 5 EFVQGK 10
EFV+GK
Sbjct: 203 EFVKGK 208
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 CATPEFV 7
C TPE +
Sbjct: 131 CVTPELI 137
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CATPEF 6
CA P+F
Sbjct: 353 CALPQF 358
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 5 EFVQGK 10
EFV+GK
Sbjct: 203 EFVKGK 208
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 CATPEF 6
CA PE+
Sbjct: 354 CAMPEY 359
81|Sequence|401|410|FVQGKEFKDF
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 KEFKDF 10
KEFKDF
Sbjct: 2082 KEFKDF 2087
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 KEFKDF 10
KEFKDF
Sbjct: 2082 KEFKDF 2087
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 KEFKDF 10
KEFKDF
Sbjct: 2082 KEFKDF 2087
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 KEFKDF 10
KEFKDF
Sbjct: 2082 KEFKDF 2087
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 KEFKDF 10
KEFKDF
Sbjct: 2082 KEFKDF 2087
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 FVQGKEFKDF 10
+ QG+ +DF
Sbjct: 6305 YTQGRNLQDF 6314
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 FVQGKEFKDF 10
F Q ++ +DF
Sbjct: 6623 FTQSRDLEDF 6632
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 KEFKDF 10
KEFK+F
Sbjct: 1673 KEFKEF 1678
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 KEFKDF 10
KEFK+F
Sbjct: 2083 KEFKEF 2088
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 KEFKDF 10
KEFK+F
Sbjct: 2083 KEFKEF 2088
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 KEFKDF 10
KEFK+F
Sbjct: 2083 KEFKEF 2088
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 5 KEFKDF 10
KEFK+F
Sbjct: 2083 KEFKEF 2088
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 KEFKDF 10
KEFK+F
Sbjct: 2083 KEFKEF 2088
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 KEFKDF 10
KEFK+F
Sbjct: 2083 KEFKEF 2088
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 5 KEFKDF 10
KEFKD+
Sbjct: 624 KEFKDY 629
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 2 VQGKEFKD 9
V+G EF+D
Sbjct: 108 VRGHEFED 115
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 4 GKEFKDF 10
GKEF D
Sbjct: 411 GKEFNDL 417
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GKEFKDF 10
G+EF+D
Sbjct: 615 GREFRDL 621
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 5 KEFKDF 10
K FKDF
Sbjct: 2110 KSFKDF 2115
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 5 KEFKDF 10
K FKDF
Sbjct: 2114 KSFKDF 2119
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FVQGKEFKDF 10
+ QG+ DF
Sbjct: 6276 YTQGRNLSDF 6285
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 1 FVQGKEFK 8
F +GKEF+
Sbjct: 72 FQKGKEFE 79
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GKEFKD 9
GKE KD
Sbjct: 784 GKELKD 789
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 QGKEFKD 9
QGK KD
Sbjct: 1471 QGKNIKD 1477
82|Sequence|406|415|EFKDFPDVLL
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 1 EFKDFPDVLL 10
EFK +PD L
Sbjct: 472 EFKAYPDGFL 481
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 FKDFPDVL 9
F DF DVL
Sbjct: 1804 FGDFDDVL 1811
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EFKDF 5
EFKDF
Sbjct: 2083 EFKDF 2087
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EFKDF 5
EFKDF
Sbjct: 2083 EFKDF 2087
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EFKDF 5
EFKDF
Sbjct: 2083 EFKDF 2087
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EFKDF 5
EFKDF
Sbjct: 2083 EFKDF 2087
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EFKDF 5
EFKDF
Sbjct: 2083 EFKDF 2087
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 EFKDFPDVLL 10
+F FP VLL
Sbjct: 321 KFVSFPAVLL 330
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 5 FPDVL 9
FPDVL
Sbjct: 151 FPDVL 155
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 5 FPDVL 9
FPDVL
Sbjct: 151 FPDVL 155
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 5 FPDVL 9
FPDVL
Sbjct: 151 FPDVL 155
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 5 FPDVL 9
FPDVL
Sbjct: 151 FPDVL 155
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 5 FPDVL 9
FPDVL
Sbjct: 151 FPDVL 155
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 FKDFPD 7
F DFP+
Sbjct: 270 FSDFPE 275
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 2 FKDFPDVLL 10
F DFP + L
Sbjct: 34 FTDFPGIRL 42
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 EFKDFPDV 8
EF+D P++
Sbjct: 331 EFEDLPNL 338
83|Sequence|411|420|PDVLLPNYFT
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PDVLLPNYFT 10
P V LP YFT
Sbjct: 164 PPVQLPQYFT 173
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 PDVLLPNYFT 10
P V LP YFT
Sbjct: 164 PPVQLPQYFT 173
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 PDVLLPNYFT 10
P V LP YFT
Sbjct: 164 PPVQLPQYFT 173
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 PDVLLPNYFT 10
P V LP YFT
Sbjct: 164 PPVQLPQYFT 173
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 PDVLLPNYFT 10
P V LP YFT
Sbjct: 164 PPVQLPQYFT 173
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 PDVLLPNYFT 10
P V LP YFT
Sbjct: 164 PPVQLPQYFT 173
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 PDVLLP 6
PDV+LP
Sbjct: 2762 PDVILP 2767
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 PDVLLP 6
PDV+LP
Sbjct: 2762 PDVILP 2767
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 1 PDVLLP 6
PD LLP
Sbjct: 472 PDTLLP 477
>sp|HEX8_ADE03|HEXON-ASSOCIATED protein|Human adenovirus B serotype 3
Query: 1 PDVLLPNY 8
PD +PN+
Sbjct: 117 PDEFIPNF 124
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 1 PDVLLPNY 8
PD++LP++
Sbjct: 404 PDIILPSH 411
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 PDVLLPN 7
P+V++PN
Sbjct: 107 PNVIMPN 113
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 DVLLPNYFT 10
D +LPN+++
Sbjct: 594 DFILPNHYS 602
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 DVLLPNYFT 10
D +LPN+++
Sbjct: 594 DFILPNHYS 602
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 PDVLLPNYFT 10
PD L N+F+
Sbjct: 802 PDTKLENFFS 811
>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12
Query: 1 PDVLLPNY 8
PD +PN+
Sbjct: 215 PDAFIPNF 222
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 PDVLLP 6
P+VLLP
Sbjct: 194 PEVLLP 199
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 VLLPNYF 9
VLLP YF
Sbjct: 258 VLLPCYF 264
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 VLLPNYF 9
VLLP YF
Sbjct: 258 VLLPCYF 264
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PDVLLP 6
P+VLLP
Sbjct: 194 PEVLLP 199
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 3 VLLPNYFT 10
+++PNY T
Sbjct: 301 LIIPNYIT 308
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PDVLLP 6
P+VLLP
Sbjct: 194 PEVLLP 199
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PDVLLP 6
P+VLLP
Sbjct: 194 PEVLLP 199
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 DVLLPNY 8
DVLL NY
Sbjct: 555 DVLLGNY 561
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PDVLLP 6
P+VLLP
Sbjct: 194 PEVLLP 199
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PDVLLP 6
P+VLLP
Sbjct: 194 PEVLLP 199
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 PDVLLP 6
P+VLLP
Sbjct: 194 PEVLLP 199
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DVLLPN 7
+VLLPN
Sbjct: 74 EVLLPN 79
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 PDVLLP 6
P+VLLP
Sbjct: 194 PEVLLP 199
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 PDVLLP 6
P+VLLP
Sbjct: 194 PEVLLP 199
>sp|CAP8_ADE02|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 2
Query: 1 PDVLLPNY 8
PD +PN+
Sbjct: 209 PDQFIPNF 216
>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3
Query: 1 PDVLLP 6
PD+LLP
Sbjct: 413 PDILLP 418
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2239 VLLPNVHT 2246
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2239 VLLPNVHT 2246
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2240 VLLPNVHT 2247
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 4 LLPNYF 9
LLPN++
Sbjct: 171 LLPNFY 176
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 DVLLPNYFT 10
DV+LP F+
Sbjct: 760 DVILPGEFS 768
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2228 VLLPNIHT 2235
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2200 VLLPNVHT 2207
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 PDVLLPN 7
P+V++PN
Sbjct: 107 PNVIMPN 113
>sp|CAP8_ADE05|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 5
Query: 1 PDVLLPNY 8
PD +PN+
Sbjct: 209 PDQFIPNF 216
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 DVLLPNYFT 10
DV+LP F+
Sbjct: 760 DVILPGEFS 768
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2222 VLLPNIHT 2229
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2214 VLLPNIHT 2221
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2200 VLLPNIHT 2207
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2196 VLLPNIHT 2203
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2222 VLLPNIHT 2229
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2203 VLLPNIHT 2210
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2200 VLLPNVHT 2207
>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41
Query: 4 LLPNYFT 10
+LP++FT
Sbjct: 3 MLPDFFT 9
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2223 VLLPNIHT 2230
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 1 PDVLLPN 7
PD++LP+
Sbjct: 413 PDIILPS 419
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 1 PDVLLPN 7
PDV+LP
Sbjct: 404 PDVVLPT 410
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PDVLLPNYF 9
P V L NYF
Sbjct: 46 PSVRLLNYF 54
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PDVLLPNYF 9
P V L NYF
Sbjct: 46 PSVRLLNYF 54
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PDVLLPNYF 9
P V L NYF
Sbjct: 46 PSVRLLNYF 54
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 1 PDVLLPNYF 9
P V L NYF
Sbjct: 46 PSVRLLNYF 54
>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180
Query: 1 PDVLLP 6
PDV+LP
Sbjct: 410 PDVVLP 415
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 1 PDVLLPN 7
PDV+LP
Sbjct: 414 PDVVLPT 420
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 PDVLLPN 7
PDV+LP
Sbjct: 409 PDVVLPT 415
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2241 VLLPNIHT 2248
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2163 VLLPNIHT 2170
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 VLLPNYFT 10
VLLPN T
Sbjct: 2239 VLLPNIHT 2246
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 1 PDVLLPNYFT 10
P V PNY T
Sbjct: 399 PSVQTPNYNT 408
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 1 PDVLLPNY 8
PDV LP +
Sbjct: 414 PDVELPQF 421
84|Sequence|416|425|PNYFTCRRAR
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 NYFTCRRAR 10
NY C RAR
Sbjct: 202 NYGRCTRAR 210
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 NYFTCRRAR 10
+YF RRA+
Sbjct: 558 DYFNMRRAK 566
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 NYFTCRR 8
N+F+C R
Sbjct: 947 NFFSCSR 953
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PNYFTC 6
P YFTC
Sbjct: 32 PTYFTC 37
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 PNYFTC 6
P YFTC
Sbjct: 32 PTYFTC 37
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 NYFTCRRAR 10
+YF RRA+
Sbjct: 558 DYFNMRRAK 566
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 1 PNYFTCRRAR 10
P YF C +++
Sbjct: 187 PEYFRCGKSK 196
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 3 YFTCRRA 9
+++CRRA
Sbjct: 250 WYSCRRA 256
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 3 YFTCRRA 9
+++CRRA
Sbjct: 250 WYSCRRA 256
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 3 YFTCRRA 9
+++CRRA
Sbjct: 250 WYSCRRA 256
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 3 YFTCRRA 9
YF CR A
Sbjct: 36 YFVCRNA 42
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 NYFTCRR 8
NY +C R
Sbjct: 941 NYLSCSR 947
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 NYFTCRR 8
NY +C R
Sbjct: 941 NYLSCSR 947
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 PNYFTCRRAR 10
PN TCR A
Sbjct: 439 PNRHTCRLAH 448
>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 2 NYFTC 6
NYF C
Sbjct: 144 NYFVC 148
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 2 NYFTCR 7
N+F CR
Sbjct: 323 NFFECR 328
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 2 NYFTCR 7
N+F CR
Sbjct: 323 NFFECR 328
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 PNYFTCRRAR 10
PN TC +R
Sbjct: 6168 PNRATCYNSR 6177
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 2 NYFTCR 7
N+F CR
Sbjct: 320 NFFECR 325
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 2 NYFTCR 7
N+F CR
Sbjct: 320 NFFECR 325
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 3 YFTCRRA 9
+F CRR+
Sbjct: 27 HFKCRRS 33
>sp|AP3A_SARS2|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 2 NYFTC 6
NYF C
Sbjct: 144 NYFLC 148
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 NYFTCRRAR 10
NYFT +R
Sbjct: 444 NYFTAEVSR 452
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 PNYFTCRRA 9
PNY RRA
Sbjct: 189 PNYTNFRRA 197
>sp|VIF_HV1MV|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 NYFTC 6
+YFTC
Sbjct: 110 HYFTC 114
>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PNYFTCRRA 9
PNY RRA
Sbjct: 189 PNYTNFRRA 197
>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)
Query: 1 PNYFTCRRA 9
PNY RRA
Sbjct: 189 PNYTNFRRA 197
85|Sequence|421|430|CRRARIRDRK
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 CRRARIR 7
C++ARIR
Sbjct: 239 CKKARIR 245
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 CRRARIRD 8
CR A++RD
Sbjct: 2726 CRAAKLRD 2733
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 CRRARIRD 8
CR A++RD
Sbjct: 2722 CRAAKLRD 2729
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 CRRARIRD 8
CR A++RD
Sbjct: 2723 CRAAKLRD 2730
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 CRRARIRD 8
CR A++RD
Sbjct: 2726 CRAAKLRD 2733
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 CRRARIRD 8
CR A I+D
Sbjct: 2730 CRAANIKD 2737
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 CRRARIRD 8
CR A I+D
Sbjct: 2731 CRAANIKD 2738
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CRRARIR 7
CR+ R+R
Sbjct: 461 CRKPRVR 467
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 RRARIRDRK 10
+ ARI D+K
Sbjct: 3998 KEARINDKK 4006
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 RRARIRDRK 10
+ ARI D+K
Sbjct: 4036 KEARINDKK 4044
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 RRARIRDRK 10
+ ARI D+K
Sbjct: 4056 KEARINDKK 4064
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 RRARIRDRK 10
+ ARI D+K
Sbjct: 4086 KEARINDKK 4094
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 RRARIRDRK 10
+ ARI D+K
Sbjct: 3998 KEARINDKK 4006
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 RRARIRDRK 10
+ ARI D+K
Sbjct: 4036 KEARINDKK 4044
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 RRARIRDRK 10
+ ARI D+K
Sbjct: 4056 KEARINDKK 4064
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 RRARIRDRK 10
+ ARI D+K
Sbjct: 4086 KEARINDKK 4094
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 1 CRRARIRDR 9
C R R+ DR
Sbjct: 299 CFRYRLNDR 307
86|Sequence|426|435|IRDRKAQQVF
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 IRDRKAQQVF 10
+R+RK +VF
Sbjct: 392 LRNRKKSKVF 401
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 DRKAQQVF 10
DRK +VF
Sbjct: 92 DRKLSEVF 99
87|Sequence|431|440|AQQVFVDEGH
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 3 QVFVDEGH 10
Q F D GH
Sbjct: 369 QTFADSGH 376
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AQQVFVDEGH 10
AQQ D GH
Sbjct: 115 AQQAAADTGH 124
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AQQVFVDEGH 10
AQQ D GH
Sbjct: 115 AQQAAADTGH 124
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AQQVFVDEGH 10
AQQ D GH
Sbjct: 115 AQQAAADTGH 124
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AQQVFVDEGH 10
AQQ D GH
Sbjct: 115 AQQAAADTGH 124
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AQQVFVDEGH 10
AQQ D GH
Sbjct: 115 AQQAAADTGH 124
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 FVDEGH 10
+VDEGH
Sbjct: 799 YVDEGH 804
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 FVDEGH 10
+VDEGH
Sbjct: 799 YVDEGH 804
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 FVDEGH 10
+VDEGH
Sbjct: 799 YVDEGH 804
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AQQVFVDEGH 10
AQQ D GH
Sbjct: 115 AQQAAADTGH 124
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AQQVFVDEGH 10
AQQ D GH
Sbjct: 115 AQQAAADTGH 124
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AQQVFVDEGH 10
AQQ D GH
Sbjct: 115 AQQAAADTGH 124
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AQQVFVDEGH 10
AQQ D GH
Sbjct: 115 AQQAAADTGH 124
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AQQVFVDEGH 10
AQQ D GH
Sbjct: 115 AQQAAADTGH 124
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 AQQVFVDEGH 10
A+ F+DE H
Sbjct: 2806 AETWFLDENH 2815
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 2 QQVFVDEGH 10
+QV+ D GH
Sbjct: 488 EQVWSDFGH 496
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 AQQVFVDEGH 10
A FV+E H
Sbjct: 329 ASSTFVEEEH 338
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 AQQVFVDEGH 10
A FV+E H
Sbjct: 329 ASSTFVEEEH 338
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 2 QQVFVDEGH 10
QQ V+ GH
Sbjct: 145 QQTQVEHGH 153
88|Sequence|436|445|VDEGHTVQFV
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 1 VDEGHTVQFV 10
VD+GH V V
Sbjct: 86 VDDGHFVNIV 95
>sp|M2_I81A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 1 VDEGHTVQFV 10
VD+GH V V
Sbjct: 86 VDDGHFVNIV 95
>sp|M2_I67A2|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 VDEGHTVQFV 10
VD+GH V V
Sbjct: 86 VDDGHFVNIV 95
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 DEGHTVQF 9
DEGH V++
Sbjct: 144 DEGHQVKW 151
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 2 DEGHTVQ 8
DEGH V+
Sbjct: 281 DEGHRVR 287
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 3 EGHTVQF 9
+G+T+QF
Sbjct: 838 DGYTIQF 844
>sp|NSP4_ROTB2|NON-STRUCTURAL glycoprotein 4|Rotavirus X (isolate
Query: 2 DEGHTVQF 9
DEG VQ+
Sbjct: 203 DEGSVVQY 210
>sp|VHR2_YMTV5|PROBABLE host range protein 2|Yaba monkey tumor virus (strain
Query: 1 VDEGHTVQFV 10
VD+G+T F+
Sbjct: 126 VDQGNTYMFI 135
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VDEGH 5
VDEGH
Sbjct: 800 VDEGH 804
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VDEGH 5
VDEGH
Sbjct: 800 VDEGH 804
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VDEGH 5
VDEGH
Sbjct: 800 VDEGH 804
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 244 LDRPHTPQFL 253
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 245 LDRPHTPQFL 254
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 245 LDRPHTPQFL 254
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 244 LDRPHTPQFL 253
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 244 LDRPHTPQFL 253
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 244 LDRPHTPQFL 253
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 245 LDRPHTPQFL 254
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 245 LDRPHTPQFL 254
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 245 LDRPHTPQFL 254
>sp|VHR2_YLDV|PROBABLE host range protein 2|Yaba-like disease virus (YLDV)
Query: 1 VDEGHTVQFV 10
VD+G+T F+
Sbjct: 126 VDQGNTYMFI 135
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 244 LDRPHTPQFL 253
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 244 LDRPHTPQFL 253
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 244 LDRPHTPQFL 253
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 245 LDRPHTPQFL 254
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 245 LDRPHTPQFL 254
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 VDEGHTVQFV 10
+D HT QF+
Sbjct: 245 LDRPHTPQFL 254
>sp|NSP4_ROTJ1|NON-STRUCTURAL glycoprotein 4|Rotavirus X (strain
Query: 2 DEGHTVQF 9
DEG VQ+
Sbjct: 203 DEGSVVQY 210
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 DEGHTV 7
DEG+TV
Sbjct: 555 DEGYTV 560
>sp|M2_I88A5|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I82A7|MATRIX protein 2|Influenza A virus (strain A/Swine/Hong
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I78A3|MATRIX protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I77A9|MATRIX protein 2|Influenza A virus (strain A/Equine/New
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I59A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I54A1|MATRIX protein 2|Influenza A virus (strain A/Swine/May/1954
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I37A0|MATRIX protein 2|Influenza A virus (strain A/Swine/29/1937
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I33A0|MATRIX protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I18A0|MATRIX protein 2|Influenza A virus (strain A/Brevig
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I05A1|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I03A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I02A7|MATRIX protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 84 VDDGHFV 90
>sp|M2_I02A6|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I02A5|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I02A1|MATRIX protein 2|Influenza A virus (strain A/Guinea
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 79 VDDGHFV 85
>sp|M2_I02A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I01A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I01A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 89 VDDGHFV 95
>sp|M2_I01A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I00A0|MATRIX protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I000F|MATRIX protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 DEGHTV 7
DEG+TV
Sbjct: 555 DEGYTV 560
>sp|M2_I85A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I02A4|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I02A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I01A0|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I96A0|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I97A1|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I97A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 VDEGHTVQ 8
+DEGH +
Sbjct: 1742 LDEGHNAK 1749
>sp|M2_I02A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|M2_I03A0|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 1 VDEGHTV 7
VD+GH V
Sbjct: 86 VDDGHFV 92
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 2 DEGHT 6
D+GHT
Sbjct: 590 DDGHT 594
89|Sequence|441|450|TVQFVCRADG
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 TVQFVCRADG 10
T Q++C ADG
Sbjct: 116 TDQYLCGADG 125
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 TVQFVCRADG 10
T Q++C ADG
Sbjct: 116 TDQYLCGADG 125
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QFVCRAD 9
Q++CR D
Sbjct: 368 QYICRRD 374
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QFVCRAD 9
Q++CR D
Sbjct: 368 QYICRRD 374
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QFVCRAD 9
Q++CR D
Sbjct: 368 QYICRRD 374
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QFVCRAD 9
Q++CR D
Sbjct: 368 QYICRRD 374
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 QFVCRAD 9
Q++CR D
Sbjct: 368 QYICRRD 374
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 3 QFVCR 7
QFVCR
Sbjct: 101 QFVCR 105
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 5 VCRADG 10
VCR DG
Sbjct: 1416 VCRLDG 1421
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 5 VCRADG 10
VCR DG
Sbjct: 1416 VCRLDG 1421
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 VQFVCRAD 9
+ F CR D
Sbjct: 270 LSFTCRCD 277
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 VQFVCRAD 9
V+F C AD
Sbjct: 341 VEFNCTAD 348
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 VQFVCRAD 9
V+F C AD
Sbjct: 341 VEFNCTAD 348
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 VQFVCRAD 9
V+F C AD
Sbjct: 341 VEFNCTAD 348
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 VQFVCRAD 9
+ F CR D
Sbjct: 270 LSFTCRCD 277
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 VQFVCRAD 9
+ F CR D
Sbjct: 270 LSFTCRCD 277
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 VQFVCRAD 9
+ F CR D
Sbjct: 270 LSFTCRCD 277
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 VQFVCRAD 9
+ F CR D
Sbjct: 270 LSFTCRCD 277
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 VQFVCRAD 9
V+F C AD
Sbjct: 341 VEFNCTAD 348
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 2 VQFVCRAD 9
V+F C AD
Sbjct: 119 VKFDCNAD 126
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 VQFVCRAD 9
V+F C AD
Sbjct: 342 VEFNCTAD 349
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 VQFVCRAD 9
V+F C AD
Sbjct: 342 VEFNCTAD 349
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 QFVCRADG 10
Q++C DG
Sbjct: 200 QYMCGVDG 207
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 3 QFVCRADG 10
Q++C DG
Sbjct: 200 QYMCGVDG 207
90|Sequence|446|455|CRADGDPPPA
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 DGDPPPA 10
DGDP PA
Sbjct: 2420 DGDPKPA 2426
>sp|PG061_VARV|PROTEIN OPG061|Variola virus
Query: 4 DGDPP 8
DGDPP
Sbjct: 106 DGDPP 110
>sp|PG061_VAR67|PROTEIN OPG061|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 DGDPP 8
DGDPP
Sbjct: 106 DGDPP 110
>sp|PG061_VACCP|PROTEIN OPG061|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 DGDPP 8
DGDPP
Sbjct: 106 DGDPP 110
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 CRADGD 6
CR DGD
Sbjct: 1417 CRLDGD 1422
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 CRADGDPP 8
CR G PP
Sbjct: 57 CRLSGIPP 64
>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 RADGDPPP 9
RA G PPP
Sbjct: 21 RASGSPPP 28
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 4 DGDPPP 9
D DPPP
Sbjct: 733 DADPPP 738
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 1 CRADGDPP 8
CR G PP
Sbjct: 59 CRLKGIPP 66
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 1 CRADGDPPP 9
C A G PPP
Sbjct: 148 CLATGRPPP 156
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 RADGDPPP 9
R DG P P
Sbjct: 2947 RGDGTPHP 2954
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 RADGDPPP 9
R DG P P
Sbjct: 2967 RGDGTPHP 2974
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 RADGDPPP 9
R DG P P
Sbjct: 2997 RGDGTPHP 3004
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 RADGDPPP 9
R DG P P
Sbjct: 2947 RGDGTPHP 2954
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 RADGDPPP 9
R DG P P
Sbjct: 2967 RGDGTPHP 2974
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 RADGDPPP 9
R DG P P
Sbjct: 2997 RGDGTPHP 3004
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 ADGDPPP 9
ADG P P
Sbjct: 2910 ADGSPQP 2916
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 ADGDPPP 9
ADG P P
Sbjct: 2910 ADGSPQP 2916
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 CRADGDP 7
C ADG P
Sbjct: 121 CGADGKP 127
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 CRADGDP 7
C ADG P
Sbjct: 121 CGADGKP 127
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 RADGDPPPA 10
R DG PPA
Sbjct: 1190 RYDGTIPPA 1198
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 RADGDPPPA 10
R DG PPA
Sbjct: 1169 RYDGTIPPA 1177
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 RADGDPPPA 10
R DG PPA
Sbjct: 1171 RYDGTIPPA 1179
>sp|PG061_VACCC|PROTEIN OPG061|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 DGDPP 8
DG+PP
Sbjct: 106 DGNPP 110
>sp|PG061_MONPV|PROTEIN OPG061|Monkeypox virus (MPXV)
Query: 4 DGDPP 8
DG+PP
Sbjct: 106 DGNPP 110
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 CRADGDPPPA 10
C A+GD P A
Sbjct: 2220 CTANGDHPDA 2229
>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 DGDPPP 9
D DPPP
Sbjct: 62 DDDPPP 67
>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DGDPPP 9
D DPPP
Sbjct: 62 DDDPPP 67
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 DPPPA 10
DPPP
Sbjct: 606 DPPPG 610
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 DPPPA 10
DPPP
Sbjct: 606 DPPPG 610
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 DPPPA 10
DPPP
Sbjct: 606 DPPPG 610
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 3 ADGDPPP 9
A GDP P
Sbjct: 289 ASGDPTP 295
Query: 1 CRADGDPP 8
CR D PP
Sbjct: 310 CRPDRCPP 317
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 6 DPPP 9
DPPP
Sbjct: 415 DPPP 418
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 DGDPPP 9
DG+P P
Sbjct: 2421 DGEPKP 2426
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 5 GDPPP 9
G PPP
Sbjct: 336 GSPPP 340
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 2 RADGDPPP 9
RA G PPP
Sbjct: 973 RAGGGPPP 980
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 5 GDPPP 9
G PPP
Sbjct: 336 GSPPP 340
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 CRADGD 6
CR DG+
Sbjct: 1417 CRLDGE 1422
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CRADGDPP 8
C A G PP
Sbjct: 194 CEAIGRPP 201
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 6 DPPPA 10
DPPP
Sbjct: 13 DPPPG 17
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 6 DPPPA 10
DPPP
Sbjct: 13 DPPPG 17
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CRADGDPP 8
C A G PP
Sbjct: 194 CEAIGRPP 201
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 6 DPPPA 10
DPPP
Sbjct: 13 DPPPG 17
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 6 DPPPA 10
DPPP
Sbjct: 13 DPPPG 17
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 DPPPA 10
DPPP
Sbjct: 13 DPPPG 17
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 6 DPPPA 10
DPPP
Sbjct: 13 DPPPG 17
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 CRADGDPPP 9
RA GDP P
Sbjct: 1931 LRAGGDPGP 1939
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 CRADGDP 7
C+ DG P
Sbjct: 599 CKTDGRP 605
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 1 CRADGDPPP 9
C+A G PP
Sbjct: 19 CKASGTCPP 27
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 6 DPPP 9
DPPP
Sbjct: 384 DPPP 387
91|Sequence|451|460|DPPPAILWLS
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 PPAILWLS 10
PP+++WL+
Sbjct: 1265 PPSLVWLA 1272
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 2 PPPAILWL 9
PPP++ WL
Sbjct: 155 PPPSLPWL 162
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 PPAILWLS 10
PP++ W+S
Sbjct: 1288 PPSLAWVS 1295
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 PPAILWLS 10
PP++ W+S
Sbjct: 1288 PPSLAWVS 1295
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 PPPAILWL 9
PP A+ W
Sbjct: 316 PPAALFWF 323
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 2 PPPAILWLS 10
PPP I W S
Sbjct: 1260 PPPQIRWAS 1268
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1445 PPPAI 1449
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 PPPAILWLS 10
PP ++W S
Sbjct: 544 PPKNLIWTS 552
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 PPPAILWLS 10
PP ++W S
Sbjct: 544 PPKNLIWTS 552
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1465 PPPAI 1469
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1455 PPPAI 1459
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 PPPAILWLS 10
PP ++W S
Sbjct: 544 PPKDLIWTS 552
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1456 PPPAI 1460
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1446 PPPAI 1450
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1457 PPPAI 1461
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1446 PPPAI 1450
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1449 PPPAI 1453
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1444 PPPAI 1448
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1455 PPPAI 1459
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 PPPAI 6
PPPAI
Sbjct: 1447 PPPAI 1451
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1447 PPPAI 1451
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1418 PPPAI 1422
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1458 PPPAI 1462
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1425 PPPAI 1429
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 PPPAI 6
PPPAI
Sbjct: 1421 PPPAI 1425
>sp|LHDAG_HDVV2|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 2 PPPAILWL 9
PPP W+
Sbjct: 201 PPPGYYWV 208
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 PPPAI 6
PPPAI
Sbjct: 1432 PPPAI 1436
>sp|LHDAG_HDVP1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 2 PPPAILWL 9
PPP W+
Sbjct: 201 PPPGYYWV 208
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 PPPAILW 8
PP ++W
Sbjct: 479 PPKRLIW 485
>sp|LHDAG_HDVV1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 2 PPPAILWL 9
PPP W+
Sbjct: 201 PPPGYYWV 208
>sp|LHDAG_HDVV3|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 2 PPPAILWL 9
PPP W+
Sbjct: 201 PPPGYYWV 208
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 PPPAILWL 9
PP LWL
Sbjct: 1840 PPLGKLWL 1847
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 PPPAILWL 9
PP LWL
Sbjct: 1839 PPLGKLWL 1846
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 4 PAILWLS 10
PA++WL
Sbjct: 1677 PAVIWLE 1683
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 2 PPPAILW 8
PPP + W
Sbjct: 154 PPPNVTW 160
92|Sequence|456|465|ILWLSPRKHL
>sp|UL56_HHV1E|PROTEIN UL56|Human herpesvirus 1 (strain HFEM)
Query: 1 ILWLSPRKHL 10
++W PR HL
Sbjct: 40 LIWTPPRTHL 49
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WLSPRK 8
WL+P+K
Sbjct: 956 WLNPKK 961
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WLSPRK 8
WL+P+K
Sbjct: 956 WLNPKK 961
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WLSPRK 8
WL+P+K
Sbjct: 956 WLNPKK 961
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WLSPRK 8
WL+P+K
Sbjct: 956 WLNPKK 961
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WLSPRK 8
WL+P+K
Sbjct: 956 WLNPKK 961
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WLSPRK 8
WL+P+K
Sbjct: 956 WLNPKK 961
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WLSPRK 8
WL+P+K
Sbjct: 956 WLNPKK 961
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WLSPRK 8
WL+P+K
Sbjct: 956 WLNPKK 961
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WLSPRK 8
WL+P+K
Sbjct: 950 WLNPKK 955
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 WLSPRK 8
WL+P+K
Sbjct: 956 WLNPKK 961
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 LSPRKH 9
LSPR+H
Sbjct: 293 LSPRRH 298
Query: 3 WLSPR 7
WL+PR
Sbjct: 602 WLNPR 606
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 3 WLSPRKH 9
+L PR+H
Sbjct: 358 YLKPRRH 364
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 ILWLSPRKH 9
I +L+P KH
Sbjct: 204 IFFLTPHKH 212
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 ILWLSPRKH 9
I +L+P KH
Sbjct: 204 IFFLTPHKH 212
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 ILWLSPRKH 9
I +L+P KH
Sbjct: 204 IFFLTPHKH 212
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 3 WLSPRKH 9
W+SP H
Sbjct: 375 WISPPSH 381
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LWLSPRKH 9
LW+S +KH
Sbjct: 913 LWVSIQKH 920
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WLSPR 7
WL+PR
Sbjct: 602 WLTPR 606
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WLSPR 7
WL+PR
Sbjct: 602 WLTPR 606
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WLSPR 7
WL+PR
Sbjct: 602 WLTPR 606
Query: 4 LSPRKHL 10
SPR+H+
Sbjct: 293 FSPRRHV 299
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WLSPR 7
WL+PR
Sbjct: 602 WLTPR 606
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 WLSPR 7
WL+PR
Sbjct: 603 WLTPR 607
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WLSPR 7
WL+PR
Sbjct: 602 WLTPR 606
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 ILWLSP 6
+ WLSP
Sbjct: 1188 VTWLSP 1193
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 WLSPR 7
WL+PR
Sbjct: 606 WLTPR 610
>sp|YEC4_EBVB9|UNCHARACTERIZED protein EC-RF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ILWLSPRKHL 10
+L L PR H+
Sbjct: 195 VLVLQPRGHV 204
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 WLSPR 7
WL+PR
Sbjct: 600 WLTPR 604
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 WLSPR 7
WL+PR
Sbjct: 603 WLTPR 607
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 WLSPR 7
WL+PR
Sbjct: 606 WLTPR 610
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 WLSPR 7
WL+PR
Sbjct: 606 WLTPR 610
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 WLSPR 7
WL+PR
Sbjct: 603 WLTPR 607
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WLSPR 7
WL+PR
Sbjct: 602 WLTPR 606
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 WLSPR 7
WL+PR
Sbjct: 610 WLTPR 614
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 WLSPR 7
WL+PR
Sbjct: 608 WLTPR 612
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WLSPR 7
WL+PR
Sbjct: 602 WLTPR 606
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 WLSPR 7
WL+PR
Sbjct: 606 WLTPR 610
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 WLSPR 7
WL+PR
Sbjct: 604 WLTPR 608
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 WLSPR 7
WL+PR
Sbjct: 608 WLTPR 612
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 WLSPR 7
WL+PR
Sbjct: 606 WLTPR 610
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 WLSPR 7
WL+PR
Sbjct: 607 WLTPR 611
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 WLSPR 7
WL+PR
Sbjct: 607 WLTPR 611
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 WLSPR 7
WL+PR
Sbjct: 602 WLTPR 606
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 WLSPR 7
WL+PR
Sbjct: 606 WLTPR 610
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ILWLSPRKHL 10
+ +L+P KH+
Sbjct: 556 LAYLNPSKHM 565
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ILWLSPRKHL 10
+ +L+P KH+
Sbjct: 556 LAYLNPSKHM 565
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 ILWLSPRK 8
I W+ P K
Sbjct: 1734 IQWMKPNK 1741
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LWLSPRKHL 10
+W PR H+
Sbjct: 149 MWCQPRYHI 157
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 WLSPR 7
WL+PR
Sbjct: 602 WLTPR 606
>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LWLSPRKHL 10
+W PR H+
Sbjct: 149 MWCQPRYHI 157
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 5 SPRKHL 10
SPR HL
Sbjct: 104 SPRHHL 109
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 5 SPRKHL 10
SPR HL
Sbjct: 104 SPRHHL 109
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 2 LWLSPR 7
+WL PR
Sbjct: 21 VWLPPR 26
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 2 LWLSP 6
+WLSP
Sbjct: 414 IWLSP 418
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 2 LWLSP 6
+WLSP
Sbjct: 414 IWLSP 418
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 2 LWLSP 6
+WLSP
Sbjct: 414 IWLSP 418
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 2 LWLSPR 7
+WL PR
Sbjct: 21 VWLPPR 26
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 LWLSPRKH 9
+WL R+H
Sbjct: 960 VWLKVREH 967
93|Sequence|461|470|PRKHLVSAKS
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 PRKHLVS 7
PR+HL++
Sbjct: 132 PRQHLIN 138
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 PRKHLVSA 8
P KH VSA
Sbjct: 209 PHKHRVSA 216
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 PRKHLVSA 8
P KH VSA
Sbjct: 209 PHKHRVSA 216
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 PRKHLVSA 8
P KH VSA
Sbjct: 209 PHKHRVSA 216
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 PRKHLVSA 8
P KHLV +
Sbjct: 1104 PEKHLVRS 1111
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 RKHLVSA 8
+KH+VSA
Sbjct: 1170 KKHIVSA 1176
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 RKHLVSA 8
+KH+VSA
Sbjct: 1170 KKHIVSA 1176
94|Sequence|466|475|VSAKSNGRLT
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 1 VSAKSNGRL 9
VSAK GRL
Sbjct: 397 VSAKHTGRL 405
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 VSAKSNGRL 9
+ KSNGRL
Sbjct: 1114 IPIKSNGRL 1122
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 AKSNGRLT 10
K NGRLT
Sbjct: 1914 GKDNGRLT 1921
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 AKSNGRLT 10
K NGRLT
Sbjct: 1916 GKDNGRLT 1923
>sp|VE8E2_HPV08|PROTEIN E8^E2C|Human papillomavirus type 8
Query: 1 VSAKSNGRL 9
VSAK GRL
Sbjct: 206 VSAKHTGRL 214
>sp|X_HBVG3|PROTEIN X|Hepatitis B virus genotype G
Query: 1 VSAKSNGR 8
VSA+S+GR
Sbjct: 21 VSAESSGR 28
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 AKSNGRLT 10
+ NGRLT
Sbjct: 1916 GRDNGRLT 1923
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 3 AKSNGRLT 10
+ NGRLT
Sbjct: 1916 GRDNGRLT 1923
>sp|YVFE_VACCC|UNCHARACTERIZED 7.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KSNGRLT 10
KSNGRL+
Sbjct: 60 KSNGRLS 66
>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka
Query: 3 AKSNGRLT 10
A+S+GR+T
Sbjct: 72 AQSSGRVT 79
>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 AKSNGRLT 10
A+S+GR+T
Sbjct: 72 AQSSGRVT 79
95|Sequence|471|480|NGRLTVFPDG
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NGRLTVFPDG 10
NG TV+P G
Sbjct: 433 NGNKTVYPSG 442
>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United
Query: 1 NGRLTVFP 8
NG+LT+ P
Sbjct: 15 NGQLTILP 22
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 GRLTVFP 8
G LTVFP
Sbjct: 249 GNLTVFP 255
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 NGRLTVFPD 9
+GR TV PD
Sbjct: 2736 SGRSTVVPD 2744
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 GRLTVFP 8
G LT+FP
Sbjct: 250 GNLTIFP 256
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 GRLTVFP 8
G LT+FP
Sbjct: 252 GNLTIFP 258
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 GRLTVFP 8
G LT+FP
Sbjct: 250 GNLTIFP 256
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 GRLTVFP 8
G LT+FP
Sbjct: 250 GNLTIFP 256
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 GRLTVFP 8
G LT+FP
Sbjct: 249 GNLTIFP 255
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 GRLTVFP 8
G LT+FP
Sbjct: 250 GNLTIFP 256
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 GRLTVFP 8
G LT+FP
Sbjct: 249 GNLTIFP 255
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 GRLTVFP 8
G LT+FP
Sbjct: 249 GNLTIFP 255
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 GRLTVFP 8
G LT+FP
Sbjct: 251 GNLTIFP 257
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 GRLTVFP 8
G LT+FP
Sbjct: 251 GNLTIFP 257
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 GRLTVFP 8
G LT+FP
Sbjct: 249 GNLTIFP 255
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 GRLTVFP 8
G LT+FP
Sbjct: 251 GNLTIFP 257
>sp|VU84_HHV6U|PROTEIN U84|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 RLTVFPD 9
RLTVF D
Sbjct: 111 RLTVFTD 117
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 NGRLTVFPD 9
NG+ V PD
Sbjct: 191 NGKTKVIPD 199
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 NGRLTV 6
NGRLTV
Sbjct: 1917 NGRLTV 1922
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NGRLTVFPDG 10
NG ++VF +G
Sbjct: 40 NGNISVFVNG 49
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 NGRLTV 6
NGRLTV
Sbjct: 1919 NGRLTV 1924
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 NGRLTV 6
NGRLTV
Sbjct: 1919 NGRLTV 1924
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 NGRLTV 6
NGRLTV
Sbjct: 1919 NGRLTV 1924
>sp|UL140_HCMVM|PROTEIN UL140|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NGRLTVFPDG 10
NG TV P G
Sbjct: 7 NGTTTVHPHG 16
>sp|PG142_VARV|CORE protein OPG142|Variola virus
Query: 1 NGRLTVFPD 9
+GR+ V PD
Sbjct: 22 SGRVIVMPD 30
>sp|PG142_VAR67|CORE protein OPG142|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 NGRLTVFPD 9
+GR+ V PD
Sbjct: 22 SGRVIVMPD 30
>sp|PG142_VACCC|CORE protein OPG142|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NGRLTVFPD 9
+GR+ V PD
Sbjct: 22 SGRVIVMPD 30
>sp|PG142_VACCA|CORE protein OPG142|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NGRLTVFPD 9
+GR+ V PD
Sbjct: 22 SGRVIVMPD 30
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 NGRLTVFP 8
N +LT FP
Sbjct: 1673 NPKLTAFP 1680
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 GRLTVFP 8
GR T FP
Sbjct: 77 GRFTSFP 83
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 LTVFPDG 10
LTV+P G
Sbjct: 164 LTVYPHG 170
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 LTVFPDG 10
LTV+P G
Sbjct: 164 LTVYPHG 170
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 LTVFPDG 10
LTV+P G
Sbjct: 164 LTVYPHG 170
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 LTVFPDG 10
LTV+P G
Sbjct: 164 LTVYPHG 170
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 LTVFPDG 10
LTV+P G
Sbjct: 164 LTVYPHG 170
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 LTVFPDG 10
LTV+P G
Sbjct: 164 LTVYPHG 170
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 LTVFPDG 10
LTV+P G
Sbjct: 164 LTVYPHG 170
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 LTVFPDG 10
LTV+P G
Sbjct: 164 LTVYPHG 170
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 LTVFPDG 10
LTV+P G
Sbjct: 164 LTVYPHG 170
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 LTVFPDG 10
LTV+P G
Sbjct: 164 LTVYPHG 170
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 LTVFPDG 10
LTV+P G
Sbjct: 164 LTVYPHG 170
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 LTVFPDG 10
LTV+P G
Sbjct: 143 LTVYPHG 149
>sp|PG142_MONPV|CORE protein OPG142|Monkeypox virus (MPXV)
Query: 1 NGRLTVFPD 9
+GR+ + PD
Sbjct: 22 SGRVIIMPD 30
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 NGRLTVFPDG 10
NG LT+F +G
Sbjct: 563 NGSLTLFWNG 572
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 2 GRLTVFPDG 10
GRL + DG
Sbjct: 234 GRLAISSDG 242
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 NGRLTV 6
NG+LTV
Sbjct: 741 NGKLTV 746
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 2 GRLTVFPDG 10
GR FPDG
Sbjct: 74 GRDFKFPDG 82
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 2 GRLTVFPDG 10
GR FPDG
Sbjct: 74 GRDFKFPDG 82
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 NGRLTVFPDG 10
NG++TV G
Sbjct: 301 NGQITVLQPG 310
96|Sequence|476|485|VFPDGTLEVR
>sp|PG138_VARV|25 kDa core protein OPG138|Variola virus
Query: 4 DGTLEVR 10
DG LEVR
Sbjct: 126 DGQLEVR 132
>sp|PG138_VAR67|25 kDa core protein OPG138|Variola virus (isolate
Query: 4 DGTLEVR 10
DG LEVR
Sbjct: 126 DGQLEVR 132
>sp|PG138_VACCC|25 kDa core protein OPG138|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 DGTLEVR 10
DG LEVR
Sbjct: 129 DGQLEVR 135
>sp|PG138_VACCA|25 kDa core protein OPG138|Vaccinia virus (strain Ankara) (VACV)
Query: 4 DGTLEVR 10
DG LEVR
Sbjct: 124 DGQLEVR 130
>sp|PG138_MONPV|25 kDa core protein OPG138|Monkeypox virus (MPXV)
Query: 4 DGTLEVR 10
DG LEVR
Sbjct: 127 DGQLEVR 133
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 VFPDGTL 7
+FPDG +
Sbjct: 427 IFPDGCM 433
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 163 LPDGDYDVR 171
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 154 LPDGDYDVR 162
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 154 LPDGDYDVR 162
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 154 LPDGDYDVR 162
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 155 LPDGDYDVR 163
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 155 LPDGDYDVR 163
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 162 LPDGDYDVR 170
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 163 LPDGDYDVR 171
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 155 LPDGDYDVR 163
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 163 LPDGDYDVR 171
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 163 LPDGDYDVR 171
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 163 LPDGDYDVR 171
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 165 LPDGDYDVR 173
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 FPDGTLEVR 10
PDG +VR
Sbjct: 169 LPDGDYDVR 177
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 3 PDGTLE 8
P+GTLE
Sbjct: 405 PNGTLE 410
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 3 PDGTLE 8
P+GTLE
Sbjct: 407 PNGTLE 412
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 3 PDGTLE 8
P+GTLE
Sbjct: 406 PNGTLE 411
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 1 VFPDGTL 7
V P+GTL
Sbjct: 186 VMPNGTL 192
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 3 PDGTLE 8
P+GTLE
Sbjct: 405 PNGTLE 410
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 3 PDGTLE 8
P+GTLE
Sbjct: 405 PNGTLE 410
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 3 PDGTLE 8
P+GTLE
Sbjct: 407 PNGTLE 412
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 2 FPDGTL 7
PDGTL
Sbjct: 87 LPDGTL 92
>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 FPDGTL 7
+PDGT+
Sbjct: 173 YPDGTI 178
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 2 FPDGTL 7
+PDGT+
Sbjct: 165 YPDGTI 170
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 VFPDGT 6
+FP GT
Sbjct: 739 IFPSGT 744
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 VFPDGT 6
+FP GT
Sbjct: 739 IFPSGT 744
>sp|E306_ADE35|EARLY E3 6.4 kDa protein|Human adenovirus B serotype 35
Query: 2 FPDGTLEV 9
FP GTL +
Sbjct: 28 FPSGTLSL 35
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VFPDGTL 7
+FP+GT+
Sbjct: 780 LFPNGTV 786
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VFPDGTL 7
+FP+GT+
Sbjct: 780 LFPNGTV 786
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 3 PDGTLE 8
P GTLE
Sbjct: 435 PSGTLE 440
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 3 PDGTLE 8
P GTLE
Sbjct: 97 PSGTLE 102
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 3 PDGTLE 8
P GTLE
Sbjct: 409 PSGTLE 414
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 3 PDGTLE 8
P GTLE
Sbjct: 408 PSGTLE 413
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 VFPDGTLE 8
+ P+GT+E
Sbjct: 250 ITPEGTVE 257
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 3 PDGTLE 8
P GTLE
Sbjct: 409 PSGTLE 414
97|Sequence|481|490|TLEVRYAQVQ
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 TLEVRYAQ 8
T+E RY Q
Sbjct: 618 TIETRYVQ 625
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 TLEVRYA 7
T+EV+YA
Sbjct: 617 TVEVQYA 623
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 TLEVRYA 7
T+EV+YA
Sbjct: 617 TVEVQYA 623
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 TLEVRYA 7
T+EV+YA
Sbjct: 613 TVEVQYA 619
98|Sequence|486|495|YAQVQDNGTY
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 YAQVQDNGTY 10
YAQ DN Y
Sbjct: 569 YAQFSDNSGY 578
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 YAQVQDNGTY 10
YA+V +G+Y
Sbjct: 2094 YAEVTQHGSY 2103
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 YAQVQDNGTY 10
YA+V +G+Y
Sbjct: 2094 YAEVTQHGSY 2103
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 QVQDNGT 9
+VQD+GT
Sbjct: 1422 EVQDDGT 1428
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 QVQDNGT 9
+VQD+GT
Sbjct: 1421 EVQDDGT 1427
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 QVQDNGT 9
+VQD+GT
Sbjct: 1422 EVQDDGT 1428
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 YAQVQDNGTY 10
YA+V +G+Y
Sbjct: 2094 YAEVTRHGSY 2103
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 YAQVQDNGT 9
YAQ Q N T
Sbjct: 174 YAQSQTNNT 182
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 YAQVQDNGT 9
YAQ Q N T
Sbjct: 174 YAQSQTNNT 182
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 YAQVQDNGT 9
YAQ Q N T
Sbjct: 173 YAQSQTNNT 181
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 YAQVQDNGT 9
YAQ Q N T
Sbjct: 173 YAQSQTNNT 181
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 5 QDNGTY 10
QDNG Y
Sbjct: 428 QDNGLY 433
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 QDNGTY 10
QDNG Y
Sbjct: 428 QDNGLY 433
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 YAQVQDNGTY 10
Y Q+QD Y
Sbjct: 386 YVQIQDKRIY 395
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YAQVQDNGTY 10
Y Q+QD Y
Sbjct: 386 YVQIQDKRIY 395
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 5 QDNGTY 10
QDNG Y
Sbjct: 144 QDNGLY 149
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 YAQVQDNGTY 10
Y Q DN Y
Sbjct: 569 YTQFSDNSGY 578
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 YAQVQDNGTY 10
Y Q DN Y
Sbjct: 569 YTQFSDNSGY 578
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 YAQVQDNG 8
+AQ+ D G
Sbjct: 1210 FAQINDGG 1217
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 YAQVQDNGT 9
YAQ Q N T
Sbjct: 173 YAQSQINNT 181
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 YAQVQDNGT 9
YAQ Q N T
Sbjct: 173 YAQSQINNT 181
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 4 VQDNGTY 10
+Q+NG Y
Sbjct: 207 IQENGFY 213
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 1 YAQVQDNGTY 10
YA V D G Y
Sbjct: 251 YAMVGDVGKY 260
99|Sequence|491|500|DNGTYLCIAA
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 DNGTYLC 7
DNG Y+C
Sbjct: 1964 DNGHYVC 1970
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 1 DNGTYLCI 8
DNGT +C+
Sbjct: 284 DNGTVMCV 291
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 1 DNGTYLCI 8
D G YLCI
Sbjct: 103 DEGCYLCI 110
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 1 DNGTYLCI 8
D+G Y+CI
Sbjct: 93 DSGIYICI 100
>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DNGTYLCI 8
D+G Y+CI
Sbjct: 58 DSGLYVCI 65
>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DNGTYLCI 8
D+G Y+CI
Sbjct: 58 DSGLYVCI 65
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DNGTYLCI 8
D+G Y+CI
Sbjct: 93 DSGIYICI 100
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 NGTYLCIAA 10
NG+YL +A+
Sbjct: 809 NGSYLVLAS 817
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 GTYLCI 8
G YLCI
Sbjct: 485 GVYLCI 490
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 DNGTYLCIAA 10
D+G Y C+ A
Sbjct: 644 DDGNYYCLRA 653
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NGTYLCI 8
NG Y+C+
Sbjct: 108 NGDYICL 114
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 GTYLCI 8
G YLCI
Sbjct: 485 GIYLCI 490
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 GTYLCI 8
G YLCI
Sbjct: 485 GIYLCI 490
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 GTYLCI 8
G YLCI
Sbjct: 485 GIYLCI 490
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 GTYLCI 8
G YLCI
Sbjct: 485 GIYLCI 490
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 4 TYLCIA 9
TYLC A
Sbjct: 587 TYLCTA 592
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 GTYLCIA 9
G+Y+C A
Sbjct: 868 GSYVCFA 874
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 GTYLCIA 9
G+Y+C A
Sbjct: 868 GSYVCFA 874
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 4 TYLCIA 9
TYLC A
Sbjct: 587 TYLCTA 592
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 4 TYLCIA 9
TYLC A
Sbjct: 587 TYLCTA 592
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 4 TYLCIA 9
TYLC A
Sbjct: 587 TYLCTA 592
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 2 NGTYLCI 8
+G YLC+
Sbjct: 356 SGLYLCV 362
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 2 NGTYLCI 8
+G YLC+
Sbjct: 354 SGLYLCV 360
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 4 TYLCI 8
TYLCI
Sbjct: 205 TYLCI 209
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 4 TYLCIA 9
TYLC A
Sbjct: 587 TYLCTA 592
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 TYLCIA 9
TYLC A
Sbjct: 587 TYLCTA 592
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 4 TYLCIA 9
TYLC A
Sbjct: 587 TYLCTA 592
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 4 TYLCIA 9
TYLC A
Sbjct: 587 TYLCTA 592
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 4 TYLCIA 9
TYLC A
Sbjct: 587 TYLCTA 592
>sp|VU51_HHV6Z|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6B (strain Z29)
Query: 4 TYLCI 8
TYLCI
Sbjct: 205 TYLCI 209
>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39
Query: 1 DNGTYL 6
DN TYL
Sbjct: 357 DNNTYL 362
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 DNGTYLCIAA 10
D GT+ C A
Sbjct: 630 DTGTFKCSAG 639
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 NGTYLCIAA 10
NGTY C A
Sbjct: 538 NGTYNCTDA 546
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 NGTYLCIAA 10
NG+YL +++
Sbjct: 809 NGSYLVLSS 817
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 1 DNGTYLCI 8
D GT +C+
Sbjct: 284 DTGTVMCV 291
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 1 DNGTYLCI 8
D GT +C+
Sbjct: 284 DTGTVMCV 291
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 3 GTYLCI 8
G YLC+
Sbjct: 350 GLYLCV 355
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 1 DNGTYLCI 8
D GT +C+
Sbjct: 284 DTGTVMCV 291
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GTYLCI 8
GTY C+
Sbjct: 136 GTYTCV 141
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GTYLCI 8
GTY C+
Sbjct: 136 GTYTCV 141
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 1 DNGTYLCI 8
D GT +C+
Sbjct: 284 DTGTVMCV 291
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 1 DNGTYLCI 8
D GT +C+
Sbjct: 284 DTGTVMCV 291
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 1 DNGTYLCI 8
D GT +C+
Sbjct: 284 DTGTVMCV 291
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 1 DNGTYLCI 8
D GT +C+
Sbjct: 284 DTGTVMCV 291
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 NGTYLCI 8
+GTY C+
Sbjct: 742 SGTYYCV 748
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 DNGTYLCI 8
D GT +C+
Sbjct: 284 DTGTVMCV 291
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 DNGTYLCI 8
D GT +C+
Sbjct: 284 DTGTVMCV 291
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 1 DNGTYLCI 8
D GT +C+
Sbjct: 284 DTGTVMCV 291
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 NGTYLCI 8
+GTY C+
Sbjct: 742 SGTYYCV 748
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 NGTYLCIA 9
+G Y C++
Sbjct: 909 SGVYFCVS 916
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGTYLC 7
NGT LC
Sbjct: 227 NGTGLC 232
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 1 DNGTYLCI 8
DNG +C+
Sbjct: 147 DNGGTVCV 154
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 1 DNGTYLCI 8
DNG +C+
Sbjct: 147 DNGGTVCV 154
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 3 GTYLCI 8
G YLCI
Sbjct: 243 GYYLCI 248
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 2 NGTYL 6
NGTYL
Sbjct: 264 NGTYL 268
100|Sequence|496|505|LCIAANAGGN
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LCIAANAG 8
LCI AN G
Sbjct: 206 LCITANQG 213
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 1 LCIAANAGG 9
LC+ AN G
Sbjct: 203 LCVTANQGA 211
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 LCIAANAGG 9
LC+ AN G
Sbjct: 204 LCVTANQGA 212
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 LCIAANAGG 9
LC+ AN G
Sbjct: 204 LCVTANQGA 212
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 LCIAANAGG 9
LC+ AN G
Sbjct: 208 LCVTANQGA 216
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 LCIAANAGG 9
LC+ AN G
Sbjct: 208 LCVTANQGA 216
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 LCIAANA 7
+C+AANA
Sbjct: 273 VCLAANA 279
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 LCIAANA 7
+C+AANA
Sbjct: 273 VCLAANA 279
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 LCIAANA 7
+C+AANA
Sbjct: 273 VCLAANA 279
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 LCIAANA 7
+C+AANA
Sbjct: 273 VCLAANA 279
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 2 CIAANAGGN 10
CI +N G N
Sbjct: 320 CIESNPGPN 328
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 2 CIAANAGGN 10
CI +N G N
Sbjct: 320 CIESNPGPN 328
>sp|VE7_HPV41|PROTEIN E7|Human papillomavirus type 41
Query: 1 LCIAANAG 8
+C+A+N G
Sbjct: 72 VCVASNTG 79
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 LCIAANAGG 9
+C A+N GG
Sbjct: 1034 VCAASNLGG 1042
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 CIAANAG 8
C+ +NAG
Sbjct: 2700 CVESNAG 2706
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 CIAANAG 8
C+ +NAG
Sbjct: 2700 CVESNAG 2706
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 CIAANAGGN 10
C+ GGN
Sbjct: 326 CVCYETGGN 334
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 CIAANAGGN 10
C+ GGN
Sbjct: 326 CVCYETGGN 334
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 2 CIAANAGGN 10
C+AA GG+
Sbjct: 299 CLAAIDGGD 307
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 2 CIAANAGGN 10
C+AA GG+
Sbjct: 299 CLAAIDGGD 307
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 2 CIAANAGGN 10
C+AA GG+
Sbjct: 299 CLAALDGGD 307
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 CIAANAG 8
C+A N G
Sbjct: 1065 CLAVNTG 1071
101|Sequence|501|510|NAGGNDSMPA
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NAGGNDSM 8
N GGND++
Sbjct: 6631 NVGGNDAL 6638
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NAGGNDSM 8
N GGND++
Sbjct: 401 NTGGNDTI 408
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NAGGNDSM 8
N GGND++
Sbjct: 419 NTGGNDTI 426
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NAGGNDSM 8
N GGND++
Sbjct: 414 NTGGNDTI 421
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 NAGGND 6
N+GGND
Sbjct: 781 NSGGND 786
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 NAGGNDSMP 9
N GG S+P
Sbjct: 207 NEGGRPSLP 215
>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 NAGGNDSMP 9
N GG S+P
Sbjct: 207 NEGGRPSLP 215
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 1 NAGGNDSMP 9
N GG S+P
Sbjct: 207 NEGGRPSLP 215
>sp|KITH_YMTV5|THYMIDINE kinase|Yaba monkey tumor virus (strain
Query: 5 NDSMPA 10
NDS+PA
Sbjct: 57 NDSVPA 62
102|Sequence|506|515|DSMPAHLHVR
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 1 DSMPAHLHV 9
+SMP H HV
Sbjct: 227 ESMPYHGHV 235
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 3 MPAHLHVR 10
+P H H+R
Sbjct: 444 IPTHRHIR 451
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SMPAHLHVR 10
S+P+HL VR
Sbjct: 821 SVPSHLPVR 829
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SMPAHLHVR 10
S+P+HL VR
Sbjct: 823 SVPSHLPVR 831
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 SMPAHLHVR 10
S+P+HL VR
Sbjct: 821 SVPSHLPVR 829
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SMPAHLHVR 10
S+P+HL VR
Sbjct: 823 SVPSHLPVR 831
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SMPAHLHVR 10
S+P+HL VR
Sbjct: 823 SVPSHLPVR 831
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SMPAHLHVR 10
S+P+HL VR
Sbjct: 821 SVPSHLPVR 829
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 SMPAHLHVR 10
S+P+HL VR
Sbjct: 816 SVPSHLPVR 824
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 SMPAHLHVR 10
S+P+HL VR
Sbjct: 816 SVPSHLPVR 824
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 SMPAHLHVR 10
S+P+HL VR
Sbjct: 821 SVPSHLPVR 829
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 SMPAHLHVR 10
S+P+HL VR
Sbjct: 823 SVPSHLPVR 831
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 4 PAHLHVR 10
P H H+R
Sbjct: 448 PTHRHIR 454
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 5 AHLHV 9
AHLHV
Sbjct: 403 AHLHV 407
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 3 MPAHLHVR 10
+P H H++
Sbjct: 458 IPTHRHIK 465
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 DSMPAHL 7
+ MP+HL
Sbjct: 1749 EGMPSHL 1755
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 3 MPAHLHVR 10
+P H H++
Sbjct: 458 IPTHRHIK 465
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 SMPAHLH 8
S+P H H
Sbjct: 209 SIPVHAH 215
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 SMPAHLH 8
S+P H H
Sbjct: 209 SIPVHAH 215
103|Sequence|511|520|HLHVRSYSPD
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 LHVRSYSPD 10
LH+RS SP+
Sbjct: 1335 LHLRSTSPN 1343
Query: 3 HVRSYSPD 10
H+RS SP+
Sbjct: 172 HLRSVSPE 179
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 LHVRSYSP 9
LH+ SY+P
Sbjct: 1856 LHILSYTP 1863
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HLHVRSYSPD 10
H+ +RS+SP+
Sbjct: 412 HITLRSFSPN 421
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 HLHVRSYSPD 10
H+ +RS+SP+
Sbjct: 412 HITLRSFSPN 421
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 HLHVRSYSPD 10
H+ +RS+SP+
Sbjct: 412 HITLRSFSPN 421
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 HLHVRSYSPD 10
H HV +Y P+
Sbjct: 831 HSHVTNYMPE 840
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 1 HLHVRSYSP 9
H H R ++P
Sbjct: 539 HQHCREFAP 547
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 LHVRSYSPD 10
+HV+S PD
Sbjct: 1478 VHVKSDDPD 1486
>sp|NS1_I57A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 HVRSYSPD 10
HVR PD
Sbjct: 17 HVRKQVPD 24
>sp|NS1_I57A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 HVRSYSPD 10
HVR PD
Sbjct: 17 HVRKQVPD 24
>sp|NS1_I57A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 HVRSYSPD 10
HVR PD
Sbjct: 17 HVRKQVPD 24
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 HVRSYSPD 10
H R+YSP+
Sbjct: 1039 HDRAYSPE 1046
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 HVRSY 7
HVRSY
Sbjct: 1292 HVRSY 1296
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 HVRSY 7
HVRSY
Sbjct: 1292 HVRSY 1296
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 HVRSYSP 9
HV++Y P
Sbjct: 812 HVKAYVP 818
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 LHVRSY 7
LH+R+Y
Sbjct: 1472 LHIRNY 1477
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 3 HVRSYSP 9
HVR+ SP
Sbjct: 457 HVRAQSP 463
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 HVRSYSP 9
HVR+ SP
Sbjct: 457 HVRAQSP 463
104|Sequence|516|525|SYSPDWPHQP
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 YSPDWPHQP 10
+S DWPH P
Sbjct: 840 FSLDWPHAP 848
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 2 YSPDWPHQ 9
YSP+W H+
Sbjct: 620 YSPEWGHE 627
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SYSPDWPHQP 10
+Y PDW +P
Sbjct: 116 AYGPDWMARP 125
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SYSPDWPHQP 10
+Y PDW +P
Sbjct: 116 AYGPDWMARP 125
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SYSPDWPHQP 10
+Y PDW +P
Sbjct: 116 AYGPDWMARP 125
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 PDWPH 8
PDW H
Sbjct: 96 PDWTH 100
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PDWPH 8
P WPH
Sbjct: 91 PYWPH 95
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PDWPH 8
P WPH
Sbjct: 91 PYWPH 95
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 SYSPDW 6
SY P+W
Sbjct: 150 SYLPEW 155
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 SYSPDWPHQP 10
+ +PDW H P
Sbjct: 37 TRNPDWDHNP 46
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 SYSPDWPHQP 10
+ +PDW H P
Sbjct: 37 TRNPDWDHNP 46
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 SYSPDWPHQP 10
+ +PDW H P
Sbjct: 37 TRNPDWDHNP 46
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 SYSPDW 6
S SPDW
Sbjct: 612 SLSPDW 617
>sp|VU26_HHV7J|PROTEIN U26|Human herpesvirus 7 (strain JI)
Query: 2 YSPDWPHQ 9
Y P+ P+Q
Sbjct: 167 YKPNGPYQ 174
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YSPDWPHQ 9
Y+PD HQ
Sbjct: 799 YTPDKKHQ 806
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 DWPH 8
+WPH
Sbjct: 1184 EWPH 1187
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 YSPDW 6
YS DW
Sbjct: 246 YSKDW 250
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 SYSPDWPHQ 9
S+S DW ++
Sbjct: 672 SFSDDWANR 680
105|Sequence|521|530|WPHQPNKTFA
>sp|PROF_VACCA|PROFILIN virus (strain Ankara) (VACV)
Query: 5 PNKTFA 10
PN+TFA
Sbjct: 36 PNRTFA 41
>sp|PROF_VACCT|PROFILIN virus (strain Tian Tan)
Query: 5 PNKTFA 10
PN+TFA
Sbjct: 36 PNRTFA 41
>sp|PROF_VACCC|PROFILIN virus (strain Copenhagen) (VACV)
Query: 5 PNKTFA 10
PN+TFA
Sbjct: 36 PNRTFA 41
>sp|PROF_CWPXB|PROFILIN virus (strain Brighton Red)
Query: 5 PNKTFA 10
PN+TFA
Sbjct: 36 PNRTFA 41
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 PHQPNKT 8
PHQ +KT
Sbjct: 3325 PHQTDKT 3331
>sp|PROF_VARV|PROFILIN virus
Query: 5 PNKTFA 10
PN+TFA
Sbjct: 36 PNRTFA 41
>sp|PROF_VAR67|PROFILIN virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 PNKTFA 10
PN+TFA
Sbjct: 36 PNRTFA 41
>sp|PROF_MONPZ|PROFILIN virus (strain Zaire-96-I-16) (MPXV)
Query: 5 PNKTFA 10
PN+TFA
Sbjct: 36 PNRTFA 41
>sp|PROF_MONPV|PROFILIN virus (MPXV)
Query: 5 PNKTFA 10
PN+TFA
Sbjct: 36 PNRTFA 41
>sp|PROF_CWPXG|PROFILIN virus (strain GRI-90 /
Query: 5 PNKTFA 10
PN+TFA
Sbjct: 36 PNRTFA 41
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 PHQPNK 7
PH+P K
Sbjct: 1439 PHKPGK 1444
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 WPHQPNK 7
W H PNK
Sbjct: 42 WDHNPNK 48
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 WPHQPNK 7
W H PNK
Sbjct: 42 WDHNPNK 48
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 WPHQPNK 7
W H PNK
Sbjct: 42 WDHNPNK 48
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PHQPNKTFA 10
PH PN + +
Sbjct: 337 PHLPNDSLS 345
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PHQPNKTFA 10
PH PN + +
Sbjct: 337 PHLPNDSLS 345
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 WPHQPNKT 8
W H +KT
Sbjct: 1772 WAHHKSKT 1779
106|Sequence|526|535|NKTFAFISNQ
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 1 NKTFAFIS 8
NKT +FIS
Sbjct: 245 NKTLSFIS 252
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 NKTFAFISN 9
NK+ F+SN
Sbjct: 286 NKSMIFVSN 294
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NKTFAFISNQ 10
N+T+ FIS +
Sbjct: 307 NETYHFISKE 316
>sp|YVAP_VACCC|UNCHARACTERIZED 9.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TFAFISNQ 10
+F+FISN
Sbjct: 12 SFSFISNH 19
107|Sequence|531|540|FISNQPGEGE
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 FISNQPGE 8
FIS+ PGE
Sbjct: 292 FISDTPGE 299
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 1 FISNQPGE 8
F+S+ PGE
Sbjct: 292 FVSDTPGE 299
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 FISNQPGEG 9
F+ QPG G
Sbjct: 4600 FVITQPGSG 4608
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 3 SNQPGEG 9
SN PG G
Sbjct: 279 SNNPGRG 285
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 ISNQPGEG 9
I QPG+G
Sbjct: 31 IVRQPGDG 38
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 FISNQPGE 8
F SN+PG+
Sbjct: 920 FESNRPGQ 927
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 4 NQPGEG 9
N PGEG
Sbjct: 197 NPPGEG 202
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 4 NQPGEG 9
N PGEG
Sbjct: 197 NPPGEG 202
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 1 FISNQPGE 8
F+S PG+
Sbjct: 288 FVSTTPGQ 295
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 ISNQPGEG 9
+ N+PG+G
Sbjct: 158 LRNRPGKG 165
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 ISNQPGEG 9
+ N+PG+G
Sbjct: 158 LRNRPGKG 165
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 SNQPGEGE 10
S QPG G+
Sbjct: 280 SQQPGTGD 287
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 SNQPGEGE 10
S QPG G+
Sbjct: 280 SQQPGTGD 287
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 SNQPGEGE 10
S QPG G+
Sbjct: 280 SQQPGTGD 287
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 QPGEG 9
QPG+G
Sbjct: 34 QPGDG 38
108|Sequence|536|545|PGEGEANSTR
>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human
Query: 1 PGEGEANSTR 10
PG+GE + R
Sbjct: 238 PGQGETSQVR 247
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 PGEGEA 6
P EGEA
Sbjct: 1119 PSEGEA 1124
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PGEGEANS 8
PG GEA S
Sbjct: 233 PGAGEAAS 240
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 GEGEANST 9
EGEAN T
Sbjct: 856 AEGEANLT 863
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PGEGEANS 8
PG GEA S
Sbjct: 233 PGAGEAAS 240
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 GEGEANST 9
EGEAN T
Sbjct: 856 AEGEANLT 863
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 GEGEANST 9
EGEAN T
Sbjct: 856 AEGEANLT 863
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 EGEANST 9
EGEAN T
Sbjct: 856 EGEANLT 862
109|Sequence|541|550|ANSTRATVPF
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 STRATVPF 10
STR T+P
Sbjct: 1312 STRKTIPL 1319
Query: 1 ANSTRATVP 9
AN+ +TVP
Sbjct: 3279 ANAINSTVP 3287
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NSTRATVP 9
N+TR ++P
Sbjct: 299 NNTRKSIP 306
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 ANSTRATVP 9
AN T AT+P
Sbjct: 603 ANETGATLP 611
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 ANSTRATVP 9
AN T AT+P
Sbjct: 603 ANETGATMP 611
110|Sequence|546|555|ATVPFPFDIK
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 4 PFPFD 8
PFPFD
Sbjct: 560 PFPFD 564
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 4 PFPFD 8
PFPFD
Sbjct: 584 PFPFD 588
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 VPFPFDIK 10
VP PFD +
Sbjct: 839 VPQPFDFR 846
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 VPFPFDIK 10
VP PFD +
Sbjct: 839 VPQPFDFR 846
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 VPFPFDIK 10
VP PFD +
Sbjct: 841 VPQPFDFR 848
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 VPFPFDIK 10
VP PFD +
Sbjct: 839 VPQPFDFR 846
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 VPFPFDIK 10
VP PFD +
Sbjct: 839 VPQPFDFR 846
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 VPFPFDIK 10
VP PFD +
Sbjct: 845 VPQPFDFR 852
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 4 PFPFDI 9
PFP DI
Sbjct: 237 PFPIDI 242
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 PFPFDI 9
PFP DI
Sbjct: 237 PFPIDI 242
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PFPFDI 9
PFP DI
Sbjct: 237 PFPIDI 242
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 ATVPFPFD 8
A+ PFP D
Sbjct: 2064 ASYPFPID 2071
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 ATVPFPFD 8
A+ PFP D
Sbjct: 2064 ASYPFPID 2071
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 ATVPFPFD 8
A+ PFP D
Sbjct: 2064 ASYPFPID 2071
>sp|PG039_MONPV|INTERFERON antagonist OPG039|Monkeypox virus (MPXV)
Query: 1 ATVPFPFDI 9
+ +P PFD+
Sbjct: 149 SEIPSPFDL 157
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 ATVPFPFD 8
A+ PFP D
Sbjct: 2064 ASYPFPID 2071
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 ATVPFPFD 8
A+ PFP D
Sbjct: 2064 ASYPFPID 2071
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 2 TVPFPFDIK 10
++P+ +D+K
Sbjct: 707 SIPYEYDVK 715
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 TVPFPFDI 9
++P PFD+
Sbjct: 220 SLPQPFDV 227
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 2 TVPFPFDIK 10
++P+ +D+K
Sbjct: 707 SIPYEYDVK 715
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 2 TVPFPFDIK 10
++P+ +D+K
Sbjct: 707 SIPYEYDVK 715
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 3 VPFPFDIK 10
+P PFD +
Sbjct: 839 IPQPFDFR 846
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 FPFDIK 10
PFDIK
Sbjct: 197 LPFDIK 202
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 5 FPFDIK 10
PFDIK
Sbjct: 197 LPFDIK 202
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 2 TVPFPFDIK 10
++P+ +D+K
Sbjct: 707 SIPYEYDVK 715
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 FPFDIK 10
PFDIK
Sbjct: 197 LPFDIK 202
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 2 TVPFPFDIK 10
++P+ +D+K
Sbjct: 707 SIPYEYDVK 715
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 5 FPFDIK 10
PFDIK
Sbjct: 197 LPFDIK 202
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 VPFPFD 8
+PFP D
Sbjct: 589 IPFPLD 594
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 2 TVPFPFDIK 10
++P+ +D+K
Sbjct: 707 SIPYEYDVK 715
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 5 FPFDIK 10
PFDIK
Sbjct: 197 LPFDIK 202
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 5 FPFDIK 10
PFDIK
Sbjct: 499 LPFDIK 504
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 5 FPFDIK 10
PFDIK
Sbjct: 499 LPFDIK 504
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 5 FPFDIK 10
PFDIK
Sbjct: 499 LPFDIK 504
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 5 FPFDIK 10
PFDIK
Sbjct: 499 LPFDIK 504
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 5 FPFDIK 10
PFDIK
Sbjct: 499 LPFDIK 504
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 VPFPFD 8
+PFP D
Sbjct: 589 IPFPLD 594
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 5 FPFDIK 10
PFDIK
Sbjct: 499 LPFDIK 504
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 5 FPFDIK 10
PFDIK
Sbjct: 497 LPFDIK 502
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 5 FPFDIK 10
PFDIK
Sbjct: 497 LPFDIK 502
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 3 VPFPFDIK 10
+P+ +D+K
Sbjct: 708 IPYEYDVK 715
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 3 VPFPFDIK 10
+P+ +D+K
Sbjct: 708 IPYEYDVK 715
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 3 VPFPFDIK 10
+P+ +D+K
Sbjct: 708 IPYEYDVK 715
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 3 VPFPFDIK 10
+P+ +D+K
Sbjct: 708 IPYTYDVK 715
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 3 VPFPFDIK 10
+P+ +D+K
Sbjct: 708 IPYEYDVK 715
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 3 VPFPFDIK 10
+P+ +D+K
Sbjct: 708 IPYKYDVK 715
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 ATVPFP 6
ATVP P
Sbjct: 567 ATVPLP 572
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 4 PFPFDIK 10
P+P D+K
Sbjct: 269 PYPADLK 275
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 5 FPFDIK 10
FP+DI+
Sbjct: 130 FPYDIE 135
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 5 FPFDIK 10
FP+DI+
Sbjct: 130 FPYDIE 135
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 4 PFPFDIK 10
P+P D+K
Sbjct: 269 PYPADLK 275
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 TVPFPFD 8
T PF FD
Sbjct: 180 TTPFMFD 186
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 TVPFPFD 8
T PF FD
Sbjct: 181 TTPFMFD 187
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 TVPFPFDI 9
TVP P D+
Sbjct: 154 TVPPPIDL 161
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TVPFPFDI 9
TVP P D+
Sbjct: 154 TVPPPIDL 161
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TVPFPFDI 9
TVP P D+
Sbjct: 155 TVPPPIDL 162
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 5 FPFDIK 10
FPFD K
Sbjct: 237 FPFDAK 242
111|Sequence|551|560|PFDIKTLIIA
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PFDIKTLIIA 10
P D++TL+ A
Sbjct: 98 PLDLRTLLQA 107
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PFDIKTLIIA 10
P D++TL+ A
Sbjct: 98 PLDLRTLLQA 107
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DIKTLII 9
D+KT+II
Sbjct: 1386 DVKTMII 1392
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 3 DIKTLII 9
D+KT+II
Sbjct: 1400 DVKTMII 1406
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 PFDIKT 6
PF++KT
Sbjct: 275 PFEVKT 280
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 1 PFDIKTL 7
PF +KTL
Sbjct: 447 PFKLKTL 453
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 PFDIKTL 7
PF +KTL
Sbjct: 447 PFKLKTL 453
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 1 PFDIKTL 7
PF +KTL
Sbjct: 447 PFKLKTL 453
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 1 PFDIKTL 7
PF +KTL
Sbjct: 447 PFKLKTL 453
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 1 PFDIKTL 7
PF +KTL
Sbjct: 447 PFKLKTL 453
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 2 FDIKTL 7
+DIKTL
Sbjct: 661 YDIKTL 666
112|Sequence|556|565|TLIIATTMGF
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 2 LIIATTM 8
LIIATT+
Sbjct: 689 LIIATTL 695
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 2 LIIATTM 8
LIIATT+
Sbjct: 684 LIIATTL 690
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 LIIATTM 8
LIIATT+
Sbjct: 689 LIIATTL 695
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 LIIATTM 8
LIIATT+
Sbjct: 689 LIIATTL 695
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 TLIIATTMGF 10
TL++AT++ F
Sbjct: 2194 TLVLATSLIF 2203
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 TLIIATTM 8
+LIIATT+
Sbjct: 1935 SLIIATTV 1942
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 IATTMGF 10
+ATT GF
Sbjct: 6452 VATTAGF 6458
113|Sequence|561|570|TTMGFISFLG
>sp|CEP1_HHV7J|CYTOPLASMIC envelopment protein 1|Human herpesvirus 7 (strain JI)
Query: 2 TMGFISFLG 10
T+GF+ F+G
Sbjct: 73 TLGFLGFIG 81
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 GFISFLG 10
GFIS++G
Sbjct: 1928 GFISYVG 1934
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 GFISFLG 10
GFIS++G
Sbjct: 1928 GFISYVG 1934
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 GFISFLG 10
GFIS++G
Sbjct: 1928 GFISYVG 1934
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 TTMGFISFLG 10
T GF SFL
Sbjct: 395 TAFGFASFLA 404
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 5 FISFLG 10
FI+FLG
Sbjct: 460 FITFLG 465
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 TMGFISFL 9
T+GF SF+
Sbjct: 1267 TLGFGSFM 1274
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 TMGFISFL 9
T+GF SF+
Sbjct: 1267 TLGFGSFM 1274
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 TTMGFISFL 9
TT+G SFL
Sbjct: 2295 TTLGVESFL 2303
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 3 MGFISFLG 10
+GF+ F G
Sbjct: 125 LGFLCFFG 132
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 4 GFISFLG 10
GF+ +LG
Sbjct: 794 GFVGYLG 800
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 TMGFISFLG 10
T G I FLG
Sbjct: 793 TPGTIKFLG 801
114|Sequence|566|575|ISFLGVVLFC
>sp|LMP1_EBVB9|LATENT membrane protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FLGVVLF 9
FLG+VLF
Sbjct: 106 FLGIVLF 112
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ISFLGVVLFC 10
I FLG+++ C
Sbjct: 18 ILFLGILIIC 27
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ISFLGVVLFC 10
I FLG+++ C
Sbjct: 18 ILFLGILIIC 27
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 SFLGVVLFC 10
S+ G+VL C
Sbjct: 1994 SYFGLVLVC 2002
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 SFLGVVLFC 10
S+ G+VL C
Sbjct: 1994 SYFGLVLVC 2002
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 FLGVVLFC 10
FLG+++ C
Sbjct: 20 FLGILIIC 27
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 FLGVVLFC 10
FLG+++ C
Sbjct: 20 FLGILIIC 27
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 FLGVVLFC 10
FLG+++ C
Sbjct: 20 FLGILIIC 27
>sp|LMP1_EBVR|LATENT membrane protein 1|Epstein-Barr virus (strain Raji) (HHV-4)
Query: 3 FLGVVLF 9
+LG+VLF
Sbjct: 106 YLGIVLF 112
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 FLGVVLF 9
+LG+VLF
Sbjct: 106 YLGIVLF 112
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 3 FLGVVLF 9
+LG+VLF
Sbjct: 106 YLGIVLF 112
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FLGVVLF 9
+LG+VLF
Sbjct: 106 YLGIVLF 112
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 SFLGVVLF 9
+FLGV+++
Sbjct: 764 TFLGVIMY 771
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 ISFLGVVLF 9
I+F+G+V F
Sbjct: 610 IAFIGLVQF 618
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 FLGVVLFC 10
FLG FC
Sbjct: 960 FLGTAGFC 967
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 FLGVVLFC 10
FLG FC
Sbjct: 960 FLGTAGFC 967
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 FLGVVLFC 10
FLG FC
Sbjct: 960 FLGTAGFC 967
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 FLGVVLFC 10
FLG ++ C
Sbjct: 20 FLGTLIIC 27
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ISFLGVVLFC 10
I LG+++ C
Sbjct: 18 IMLLGILMIC 27
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ISFLGVVLFC 10
I LG+++ C
Sbjct: 19 IMLLGILMIC 28
115|Sequence|571|580|VVLFCLVLLF
>sp|U91_HHV6Z|PROTEIN U91|Human herpesvirus 6B (strain Z29)
Query: 1 VVLFCLVLLF 10
++LFC++++F
Sbjct: 106 ILLFCIMMIF 115
>sp|IL10H_EBVG|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VVLFCLVLLF 10
V L CLVLL+
Sbjct: 7 VTLQCLVLLY 16
>sp|IL10H_EBVB9|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VVLFCLVLLF 10
V L CLVLL+
Sbjct: 7 VTLQCLVLLY 16
>sp|IL10H_EBVA8|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VVLFCLVLLF 10
V L CLVLL+
Sbjct: 7 VTLQCLVLLY 16
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VVLFCLVLLF 10
VVL CLV+
Sbjct: 548 VVLLCLVIFL 557
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VVLFCLVLLF 10
VVL CLV+
Sbjct: 548 VVLLCLVIFL 557
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 VVLFCLVLL 9
VVL CL +L
Sbjct: 47 VVLMCLCIL 55
>sp|U91_HHV6U|UNCHARACTERIZED protein U91|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VLFCLVLLF 10
+L CL+L+F
Sbjct: 16 ILACLLLIF 24
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 3 LFCLVL 8
+FCLVL
Sbjct: 10 IFCLVL 15
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 3 LFCLVL 8
+FCLVL
Sbjct: 10 IFCLVL 15
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 3 LFCLVL 8
+FCLVL
Sbjct: 10 IFCLVL 15
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 3 LFCLVL 8
+FCLVL
Sbjct: 10 IFCLVL 15
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 3 LFCLVL 8
+FCLVL
Sbjct: 10 IFCLVL 15
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 3 LFCLVL 8
+FCLVL
Sbjct: 10 IFCLVL 15
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 2 VLFCLVLLF 10
+L CL +LF
Sbjct: 252 MLICLTVLF 260
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 VLFCL 6
VLFCL
Sbjct: 150 VLFCL 154
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 VVLFCLVLL 9
VVL CL+ L
Sbjct: 2258 VVLGCLMFL 2266
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 2 VLFCLVLLF 10
+LF +LLF
Sbjct: 15 ILFIYILLF 23
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 2 VLFCLVLLF 10
+LF +LLF
Sbjct: 15 ILFIYILLF 23
>sp|PG038_VACCC|EARLY protein OPG038|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VVLFCLVLL 9
V+LFC+ L
Sbjct: 6 VLLFCIASL 14
>sp|PG038_VARV|EARLY protein OPG038|Variola virus
Query: 1 VVLFCLVLL 9
V+LFC+ L
Sbjct: 6 VLLFCIASL 14
>sp|PG038_VAR67|EARLY protein OPG038|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 VVLFCLVLL 9
V+LFC+ L
Sbjct: 6 VLLFCIASL 14
>sp|U17_HHV6U|PROTEIN U17|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VLFCLVLLF 10
VL+C++L+F
Sbjct: 85 VLWCVILVF 93
>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)
Query: 1 VVLFCLVLL 9
V+LFC+ L
Sbjct: 6 VLLFCIASL 14
116|Sequence|576|585|LVLLFLWSRG
>sp|UL20_HHV11|PROTEIN UL20|Human herpesvirus 1 (strain 17)
Query: 2 VLLFLWS 8
V+LFLWS
Sbjct: 64 VILFLWS 70
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 LLFLWSRG 10
L+FLW+ G
Sbjct: 2201 LIFLWAGG 2208
117|Sequence|581|590|LWSRGKGNTK
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 LWSRGKGNTK 10
L S GKGN K
Sbjct: 766 LESDGKGNVK 775
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 LWSRGKG 7
LWS G+G
Sbjct: 158 LWSEGEG 164
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 RGKGNT 9
RG+GNT
Sbjct: 44 RGRGNT 49
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 LWSRGKG 7
LWS G+G
Sbjct: 158 LWSEGEG 164
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 LWSRGKG 7
LWS G+G
Sbjct: 158 LWSEGEG 164
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 LWSRGKG 7
LWS G+G
Sbjct: 158 LWSEGEG 164
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 LWSRGKG 7
LWS G+G
Sbjct: 158 LWSEGEG 164
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 WSRGKGNT 9
W RGK T
Sbjct: 1349 WIRGKAKT 1356
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 LWSRGKG 7
LWS G+G
Sbjct: 158 LWSEGEG 164
>sp|NS1_I03A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 4 RGKGNT 9
RG+GNT
Sbjct: 44 RGRGNT 49
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 LWSRGKG 7
LWS G+G
Sbjct: 158 LWSEGEG 164
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 RGKGNT 9
RG+GNT
Sbjct: 44 RGRGNT 49
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 4 RGKGNT 9
RG+GNT
Sbjct: 44 RGRGNT 49
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 LWSRGKG 7
LWS G+G
Sbjct: 158 LWSEGEG 164
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 LWSRGKG 7
LWS G+G
Sbjct: 158 LWSEGEG 164
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 4 RGKGNT 9
RG+GNT
Sbjct: 27 RGRGNT 32
>sp|NS1_I02A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 RGKGNT 9
RG+GNT
Sbjct: 44 RGRGNT 49
>sp|NS1_I02A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 RGKGNT 9
RG+GNT
Sbjct: 44 RGRGNT 49
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 4 RGKGNT 9
RG+GNT
Sbjct: 44 RGRGNT 49
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 RGKGNT 9
RG+GNT
Sbjct: 44 RGRGNT 49
>sp|NS1_I89A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/352/1989
Query: 4 RGKGNT 9
RG+GNT
Sbjct: 44 RGRGNT 49
>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 4 RGKGNT 9
RG+GNT
Sbjct: 40 RGRGNT 45
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 2 WSRGKG 7
W RGKG
Sbjct: 326 WIRGKG 331
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 2 WSRGKGNTK 10
WSR NTK
Sbjct: 368 WSRICQNTK 376
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 2 WSRGKGNTK 10
WSR NTK
Sbjct: 368 WSRICQNTK 376
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 WSRGKGNTK 10
WSR NTK
Sbjct: 368 WSRICQNTK 376
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 2 WSRGKGNTK 10
WSR NTK
Sbjct: 368 WSRICQNTK 376
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 WSRGKGNTK 10
WSR NTK
Sbjct: 368 WSRICQNTK 376
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 2 WSRGKGNTK 10
WSR NTK
Sbjct: 368 WSRICQNTK 376
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LWSRGKGN 8
LW RG+ N
Sbjct: 458 LWVRGEDN 465
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 2 WSRGKG 7
W RGKG
Sbjct: 131 WIRGKG 136
118|Sequence|586|595|KGNTKHNIEI
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GNTKHNIE 9
GNTK NIE
Sbjct: 57 GNTKSNIE 64
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GNTKHNIE 9
GNTK NIE
Sbjct: 57 GNTKSNIE 64
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate
Query: 2 GNTKHNIE 9
GNTK NIE
Sbjct: 57 GNTKSNIE 64
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 2 GNTKHNIE 9
GNTK NIE
Sbjct: 57 GNTKSNIE 64
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 3 NTKHNI 8
NT HNI
Sbjct: 265 NTSHNI 270
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 KGNTKHN 7
KG KHN
Sbjct: 451 KGTPKHN 457
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 KGNTKH 6
KG TKH
Sbjct: 941 KGKTKH 946
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 KGNTKH 6
KG TKH
Sbjct: 941 KGKTKH 946
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 KGNTKH 6
KG TKH
Sbjct: 942 KGKTKH 947
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 KGNTKH 6
KG TKH
Sbjct: 668 KGKTKH 673
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 KGNTKH 6
KG TKH
Sbjct: 668 KGKTKH 673
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 KGNTKH 6
KG TKH
Sbjct: 667 KGKTKH 672
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 KGNTKH 6
KG TKH
Sbjct: 667 KGKTKH 672
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 KGNTKH 6
KG TKH
Sbjct: 667 KGKTKH 672
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 KGNTKHN 7
KG KHN
Sbjct: 455 KGTPKHN 461
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 KGNTKH 6
KG TKH
Sbjct: 667 KGKTKH 672
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 KGNTKH 6
KG TKH
Sbjct: 667 KGKTKH 672
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 KGNTKH 6
KG TKH
Sbjct: 667 KGKTKH 672
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 1 KGNTKHN 7
KG KHN
Sbjct: 451 KGTPKHN 457
>sp|VE7_HPV5B|PROTEIN E7|Human papillomavirus type 5b
Query: 1 KGNTKHN 7
+GN KH+
Sbjct: 95 RGNCKHD 101
>sp|VE7_HPV05|PROTEIN E7|Human papillomavirus 5
Query: 1 KGNTKHN 7
+GN KH+
Sbjct: 95 RGNCKHD 101
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 2 GNTKHNIEI 10
G T HN+ +
Sbjct: 409 GRTGHNVHL 417
>sp|VE6_HPV33|PROTEIN E6|Human papillomavirus 33
Query: 4 TKHNIEI 10
T HNIE+
Sbjct: 22 TIHNIEL 28
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 KGNTKHNI 8
KG++KH I
Sbjct: 1388 KGSSKHII 1395
119|Sequence|591|600|HNIEIEYVPR
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NIEIEYVPR 10
++EIE+ PR
Sbjct: 190 SLEIEFTPR 198
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 2 NIEIEYVPR 10
++EIE+ PR
Sbjct: 190 SLEIEFTPR 198
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 2 NIEIEYVPR 10
++EIE+ PR
Sbjct: 190 SLEIEFTPR 198
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 2 NIEIEYVPR 10
++EIE+ PR
Sbjct: 190 SLEIEFTPR 198
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 2 NIEIEYVPR 10
++EIE+ PR
Sbjct: 190 SLEIEFTPR 198
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 2 NIEIEYVPR 10
++EIE+ PR
Sbjct: 190 SLEIEFTPR 198
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NIEIEYVPR 10
++EIE+ PR
Sbjct: 190 SLEIEFTPR 198
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 2 NIEIEYVPR 10
++EIE+ PR
Sbjct: 190 SLEIEFTPR 198
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 IEIEYVPR 10
+ IEY+PR
Sbjct: 213 VTIEYLPR 220
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 IEIEYVPR 10
+ IEY+PR
Sbjct: 213 VTIEYLPR 220
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 HNIEIEYVPR 10
+N+E Y+PR
Sbjct: 2138 NNLENSYIPR 2147
>sp|B8_HHV6Z|PROTEIN B8|Human herpesvirus 6B (strain Z29)
Query: 1 HNIEIEYVPR 10
H ++ ++VPR
Sbjct: 226 HKVKDQWVPR 235
Query: 1 HNIEIEYVPR 10
H ++ ++VPR
Sbjct: 121 HTVKGQWVPR 130
Query: 1 HNIEIEYVPR 10
H ++ ++VPR
Sbjct: 86 HKVKGQWVPR 95
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 IEIEYVPR 10
+EI Y PR
Sbjct: 1924 LEISYAPR 1931
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 IEIEYVPR 10
+EI Y PR
Sbjct: 1918 LEISYAPR 1925
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 IEIEYVPR 10
+EI Y PR
Sbjct: 1918 LEISYAPR 1925
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 IEIEYVPR 10
+EI Y PR
Sbjct: 1910 LEISYAPR 1917
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 1 HNIEIEY 7
HN++I Y
Sbjct: 297 HNLDINY 303
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 1 HNIEIEY 7
HN++I Y
Sbjct: 295 HNLDINY 301
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 1 HNIEIEYV 8
HN +++YV
Sbjct: 350 HNSQVKYV 357
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 NIEIEYV 8
N+E++YV
Sbjct: 527 NVELQYV 533
Query: 2 NIEIEYVP 9
NIE +Y P
Sbjct: 1002 NIEYQYPP 1009
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 NIEIEYVP 9
NIE +Y P
Sbjct: 1002 NIEYQYPP 1009
120|Sequence|596|605|EYVPRKSDAG
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 EYVPRKSDAG 10
++VPR SD+
Sbjct: 633 DFVPRSSDSA 642
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 4 PRKSDA 9
PRKSDA
Sbjct: 237 PRKSDA 242
>sp|VU26_HHV7J|PROTEIN U26|Human herpesvirus 7 (strain JI)
Query: 2 YVPRKS 7
Y+PRKS
Sbjct: 200 YLPRKS 205
>sp|VE8E2_HPV04|PROTEIN E8^E2C|Human papillomavirus 4
Query: 4 PRKSDA 9
PRKSDA
Sbjct: 45 PRKSDA 50
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 5 RKSDAG 10
RK+DAG
Sbjct: 185 RKNDAG 190
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 2 YVPRKSD 8
Y+P KSD
Sbjct: 284 YLPAKSD 290
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 YVPRKS 7
+VPRKS
Sbjct: 755 HVPRKS 760
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 5 RKSDAG 10
RK+DAG
Sbjct: 185 RKNDAG 190
121|Sequence|601|610|KSDAGISSAD
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 SDAGISSA 9
+D+GISSA
Sbjct: 2301 TDSGISSA 2308
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 SDAGISSA 9
+D+GISSA
Sbjct: 2301 TDSGISSA 2308
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11])
Query: 2 SDAGISSAD 10
SD+GIS +
Sbjct: 478 SDSGISDVE 486
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 KSDAGISSA 9
KSD +SSA
Sbjct: 453 KSDLSVSSA 461
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SDAGISSAD 10
+ AG+SS+D
Sbjct: 390 ATAGVSSSD 398
122|Sequence|606|620|ISSADAPRKFNMKMI
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 DAPRKFNMKMI 15
D PRK+ KMI
Sbjct: 522 DLPRKWKPKMI 532
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 7 PRKFNMKM 14
P KFN++M
Sbjct: 302 PEKFNVRM 309
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 1 ISSADAPRKFNMKM 14
++ + PR+ MKM
Sbjct: 62 LTRGNKPRRMMMKM 75
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 1 ISSADAPRKFNMKM 14
++ + PR+ MKM
Sbjct: 62 LTRGNKPRRMMMKM 75
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 7 PRKFNMKM 14
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 7 PRKFNMKM 14
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 7 PRKFNMKM 14
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 7 PRKFNMKM 14
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 7 PRKFNMKM 14
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 7 PRKFNMKM 14
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 7 PRKFNMKM 14
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 7 PRKFNMKM 14
P KFN +M
Sbjct: 302 PEKFNARM 309
123|Sequence|611|620|APRKFNMKMI
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 2 PRKFNMKM 9
P KFN++M
Sbjct: 302 PEKFNVRM 309
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PRKFNMKMI 10
PRK+ KMI
Sbjct: 524 PRKWKPKMI 532
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 2 PRKFNMKM 9
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 2 PRKFNMKM 9
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 2 PRKFNMKM 9
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 2 PRKFNMKM 9
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 2 PRKFNMKM 9
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 2 PRKFNMKM 9
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PRKFNMKM 9
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 2 PRKFNMKM 9
P KFN +M
Sbjct: 302 PEKFNARM 309
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PRKFNMKMI 10
PR++ KMI
Sbjct: 533 PRRWKPKMI 541
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 2 PRKFNMKM 9
PR+ MKM
Sbjct: 68 PRRMMMKM 75