LIGO1_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|GALMRKSVQM

***** No hits found ******


2|SequenceR|15|6|MSRVGGALMR

***** No hits found ******


3|SequenceR|20|11|LLPSPMSRVG

>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLPSPMSRVG 10
L+P+P+S VG
Sbjct: 424 LVPNPVSTVG 433


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC

Query: 2 LPSPMSRVG 10
+P P+ RVG
Sbjct: 89 VPKPLVRVG 97


>sp|KPRS_THEKO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LPSPMSRV 9
+P+P+SR+
Sbjct: 263 IPTPVSRI 270


>sp|Y828_METBU|UPF0210 protein Mbur_0828|Methanococcoides burtonii (strain DSM 6242

Query: 1 LLPSPMSRVG 10
L+P+P +VG
Sbjct: 403 LIPAPGKKVG 412


>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 1 LLPSPMSR 8
L PSP+SR
Sbjct: 426 LEPSPLSR 433


>sp|Y3181_METBF|UPF0210 protein Mbar_A3181|Methanosarcina barkeri (strain Fusaro /

Query: 1 LLPSPMSRVG 10
++P+P RVG
Sbjct: 403 VIPAPGKRVG 412




4|SequenceR|25|16|PQWCALLPSP

>sp|Y587_METJA|UNCHARACTERIZED protein MJ0587|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CALLPSP 10
C LLP+P
Sbjct: 47 CLLLPTP 53


>sp|Y1629_ARCFU|UNCHARACTERIZED protein AF_1629|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WCALLPSP 10
WC+ P P
Sbjct: 232 WCSFTPFP 239


>sp|NCPP_METTH|PROBABLE inosine/xanthosine triphosphatase|Methanothermobacter

Query: 2 QWCAL 6
QWCA+
Sbjct: 94 QWCAI 98




5|SequenceR|30|21|VLLLIPQWCA

>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 1 VLLLIPQW 8
V+LL+P W
Sbjct: 646 VILLVPIW 653


>sp|Y826_METJA|UNCHARACTERIZED protein MJ0826|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLLLIPQW 8
VLL+IPQ+
Sbjct: 39 VLLIIPQY 46


>sp|RS15_METTP|SMALL ribosomal subunit protein uS15|Methanothrix thermoacetophila

Query: 5 IPQWC 9
+P+WC
Sbjct: 22 LPEWC 26


>sp|SECE_METMA|PROTEIN translocase subunit SecE|Methanosarcina mazei (strain ATCC

Query: 1 VLLLIPQWCA 10
+L ++PQW A
Sbjct: 61 LLTMLPQWVA 70


>sp|SECE_METBF|PROTEIN translocase subunit SecE|Methanosarcina barkeri (strain Fusaro /

Query: 1 VLLLIPQWCA 10
+L ++PQW A
Sbjct: 61 LLTMLPQWVA 70


>sp|SECE_METAC|PROTEIN translocase subunit SecE|Methanosarcina acetivorans (strain ATCC

Query: 1 VLLLIPQWCA 10
+L ++PQW +
Sbjct: 61 LLTMLPQWVS 70




6|SequenceR|35|26|LVSGLVLLLI

>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 VSGLVLLLI 10
VSG+V LLI
Sbjct: 596 VSGVVALLI 604




7|SequenceR|40|31|TASGSLVSGL

>sp|MTSA_METBA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina barkeri

Query: 1 TASGSLVSG 9
+ASG L+SG
Sbjct: 203 SASGDLISG 211


>sp|HMGCS_THEVO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TASGSLVSGL 10
T SGS+++GL
Sbjct: 267 TYSGSMMTGL 276


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TASGSLVSGL 10
T SGS+++GL
Sbjct: 267 TYSGSMMTGL 276




8|SequenceR|45|36|RPPCGTASGS

>sp|HDRC2_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 4 CGTASGS 10
CGT +GS
Sbjct: 39 CGTCTGS 45


>sp|DGGGP_METTP|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RPPCGTASGS 10
R CG ASGS
Sbjct: 237 RMLCGDASGS 246


>sp|UPP_METTH|URACIL phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 3 PCGTASG 9
P GTASG
Sbjct: 62 PLGTASG 68


>sp|HDRC_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 4 CGTASGS 10
CGT +GS
Sbjct: 44 CGTCTGS 50


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 4 CGTASGS 10
CGT +GS
Sbjct: 38 CGTCTGS 44


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 3 PCGTASGS 10
P GT SGS
Sbjct: 314 PAGTQSGS 321




9|SequenceR|50|41|ASCECRPPCG

>sp|GMHB_THEVO|PROBABLE D-glycero-D-manno-heptose-1,7-bisphosphate

Query: 2 SCECRPP 8
SC CR P
Sbjct: 95 SCNCRKP 101


>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ASCECRPP 8
A EC PP
Sbjct: 155 AETECTPP 162


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ASCECRPP 8
A EC PP
Sbjct: 155 AETECTPP 162


>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 ASCECRPP 8
A EC PP
Sbjct: 155 AETECTPP 162


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CECRPPC 9
C C PC
Sbjct: 439 CRCGTPC 445


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CECRPPC 9
C C PC
Sbjct: 440 CRCGTPC 446


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 CECRPPC 9
C C PC
Sbjct: 439 CRCGTPC 445


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 CECRPPC 9
C C PC
Sbjct: 439 CRCGTPC 445


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CECRPPC 9
C C PC
Sbjct: 439 CRCGTPC 445


>sp|PYRD_NATPD|DIHYDROOROTATE dehydrogenase (quinone)|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ASCECRPPCG 10
A+ +CR P G
Sbjct: 133 AATDCRVPVG 142


>sp|Y144_METJA|UNCHARACTERIZED protein MJ0144|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SCECRPP 8
+C CR P
Sbjct: 119 NCHCRQP 125


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 2 SCECRPPC 9
SCEC C
Sbjct: 107 SCECDGVC 114


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 5 CRPPC 9
C PPC
Sbjct: 264 CLPPC 268




10|SequenceR|55|46|VARDQASCEC

>sp|BPSA_METJA|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ARDQASCEC 10
A+D + CEC
Sbjct: 84 AKDNSVCEC 92


>sp|CHEB2_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina mazei

Query: 1 VARDQASC 8
+A DQ+SC
Sbjct: 327 IAEDQSSC 334


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 1 VARDQASCE 9
+A D+A+CE
Sbjct: 735 LAEDRAACE 743




11|SequenceR|60|51|KRHCLVARDQ

>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RHCLVARD 9
RH L+A+D
Sbjct: 144 RHLLIAKD 151




12|SequenceR|65|56|VAVFRKRHCL

>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 VAVFRKRH 8
VA+FRK H
Sbjct: 626 VAIFRKGH 633


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VAVFRKRH 8
VA+FR+ H
Sbjct: 626 VAIFREEH 633


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VAVFRKRH 8
VA+FR+ H
Sbjct: 626 VAIFREEH 633


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VAVFRKRH 8
VA+F K+H
Sbjct: 626 VAIFDKKH 633


>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VFRKRHCL 10
+F KR CL
Sbjct: 204 MFEKRRCL 211


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VFRKRHCL 10
+F KR CL
Sbjct: 204 MFEKRRCL 211


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VAVFRKRH 8
VA+F+K H
Sbjct: 620 VALFKKEH 627


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 VAVFRKRH 8
VA+F+K H
Sbjct: 623 VALFKKEH 630




13|SequenceR|70|61|PIGEPVAVFR

>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 2 IGEPVAVFR 10
+GEP+ V+R
Sbjct: 462 VGEPIVVYR 470


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 2 IGEPVAVFR 10
+GEP+ V+R
Sbjct: 462 VGEPIVVYR 470


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 2 IGEPVAVFR 10
+GEP+ V+R
Sbjct: 462 VGEPIVVYR 470


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IGEPVAVFR 10
+GEP+ V+R
Sbjct: 462 VGEPIVVYR 470


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GEPVAVFR 10
GEP+ VFR
Sbjct: 461 GEPIVVFR 468


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 2 IGEPVAVFR 10
+GEP+ V+R
Sbjct: 462 VGEPIIVYR 470


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 2 IGEPVAVFR 10
+GEP+ V+R
Sbjct: 462 VGEPIVVYR 470


>sp|Y1316_THEGJ|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 1 PIGEPVAVFR 10
PI EP+ V R
Sbjct: 181 PIAEPIDVLR 190


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 GEPVAVFR 10
GEP+ V+R
Sbjct: 460 GEPIVVYR 467


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 GEPVAVFR 10
GEP+ V+R
Sbjct: 460 GEPIVVYR 467


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 3 GEPVAVFR 10
GEP+ V+R
Sbjct: 460 GEPIVVYR 467


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 3 GEPVAVFR 10
GEP+ V+R
Sbjct: 461 GEPIVVYR 468


>sp|DEOC_AERPE|DEOXYRIBOSE-PHOSPHATE aldolase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GEPVAVFR 10
G+PV VFR
Sbjct: 177 GDPVTVFR 184


>sp|GGR_HALVD|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Haloferax volcanii (strain ATCC 29605

Query: 3 GEPVAVFR 10
G P+A+FR
Sbjct: 383 GSPLAMFR 390


>sp|AGLR_HALVD|PROBABLE flippase AglR|Haloferax volcanii (strain ATCC 29605

Query: 1 PIGEPVAV 8
PIG+P+ V
Sbjct: 434 PIGQPIEV 441


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GEPVAVFR 10
G+PV VF+
Sbjct: 82 GKPVGVFK 89


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GEPVAVFR 10
G+PV VF+
Sbjct: 82 GKPVGVFK 89


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGEPVAVFR 10
+G+P+ V+R
Sbjct: 461 VGQPIVVYR 469


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 PIGEPVAVFR 10
P GEPV + R
Sbjct: 98 PAGEPVEITR 107


>sp|TRUD_HALSA|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain ATCC

Query: 1 PIGEPVA 7
P GEPVA
Sbjct: 294 PFGEPVA 300


>sp|TRUD_HALS3|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain ATCC

Query: 1 PIGEPVA 7
P GEPVA
Sbjct: 294 PFGEPVA 300


>sp|Y2034_SULTO|UNCHARACTERIZED solute-binding protein STK_20340|Sulfurisphaera tokodaii (strain

Query: 3 GEPVAVF 9
G+PV+VF
Sbjct: 105 GQPVSVF 111


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PIGEPVAVF 9
P+GE VAV
Sbjct: 514 PLGEAVAVI 522


>sp|PURO_HALWD|IMP cyclohydrolase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IGEPVAVFR 10
IGE AV+R
Sbjct: 9 IGETTAVYR 17


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 2 IGEPVAV 8
+GEPVA+
Sbjct: 106 VGEPVAI 112


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PIGEPVAVF 9
PI EP +F
Sbjct: 606 PIAEPAQIF 614


>sp|Y132_THEON|MEMO1 family protein TON_0132|Thermococcus onnurineus (strain NA1)

Query: 2 IGEPVAVF 9
IG P+AV+
Sbjct: 81 IGSPIAVY 88


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PIGEPVAVF 9
PI EP +F
Sbjct: 606 PIAEPAQIF 614


>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM

Query: 2 IGEPVAVFR 10
IG PVAV +
Sbjct: 89 IGAPVAVMK 97




14|SequenceR|75|66|LRTETPIGEP

>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 1 LRTETPIGEP 10
+ E P+GEP
Sbjct: 361 ISVEKPVGEP 370


>sp|RS8E_HALSA|SMALL ribosomal subunit protein eS8|Halobacterium salinarum (strain

Query: 3 TETPIGEP 10
TET +GEP
Sbjct: 32 TETTVGEP 39


>sp|RS8E_HALS3|SMALL ribosomal subunit protein eS8|Halobacterium salinarum (strain

Query: 3 TETPIGEP 10
TET +GEP
Sbjct: 32 TETTVGEP 39


>sp|TYW3_METJA|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 RTETPIGE 9
+ +TPIGE
Sbjct: 145 KVDTPIGE 152


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RTETPIGEP 10
R TP+GEP
Sbjct: 93 RIFTPLGEP 101


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 2 RTETPIGEP 10
RTE +G+P
Sbjct: 354 RTEIGVGDP 362


>sp|KPTA1_ARCFU|PROBABLE RNA 2'-phosphotransferase 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 LRTETPI 7
+RT+TPI
Sbjct: 164 IRTDTPI 170


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 3 TETPIGEP 10
T +P+GEP
Sbjct: 358 TPSPVGEP 365


>sp|COPP_THEAC|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 1 LRTETPIGE 9
L+T+ P GE
Sbjct: 187 LKTQQPFGE 195


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 TPIGEP 10
TPIG+P
Sbjct: 413 TPIGDP 418




15|SequenceR|80|71|KGLDLLRTET

>sp|METAA_METII|HOMOSERINE O-acetyltransferase|Methanomassiliicoccus intestinalis (strain

Query: 3 LDLLRTET 10
+DLLRTET
Sbjct: 67 IDLLRTET 74


>sp|RIFK_THEVO|RIBOFLAVIN kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KGLDLLRTE 9
KGLDLL TE
Sbjct: 71 KGLDLLYTE 79


>sp|HAS8_HALS8|HALOCIN-S8 S8a

Query: 2 GLDLLRTET 10
G+DLLRT T
Sbjct: 133 GVDLLRTAT 141


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KGLDLLRTE 9
KGLDL+R +
Sbjct: 644 KGLDLMRRD 652


>sp|RIFK_THEAC|RIBOFLAVIN kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KGLDLLRTE 9
KGLD+L TE
Sbjct: 71 KGLDVLYTE 79


>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KGLDLLRT 8
KG DL+RT
Sbjct: 234 KGADLIRT 241


>sp|NEP1_THEON|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus onnurineus (strain

Query: 1 KGLDLLRTE 9
+GL+LLR E
Sbjct: 124 EGLELLRME 132


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 KGLDLLRTET 10
K +D+L+TE+
Sbjct: 453 KAMDMLQTES 462


>sp|GVPC_HALMT|GAS vesicle protein C|Haloferax mediterranei (strain ATCC 33500

Query: 2 GLDLLRTE 9
G+D LRTE
Sbjct: 47 GIDTLRTE 54


>sp|NEP1_THEKO|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus kodakarensis

Query: 1 KGLDLLRTE 9
+GL+LLR E
Sbjct: 124 EGLELLRIE 132


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 KGLDLLRT 8
+ LDLLRT
Sbjct: 368 RALDLLRT 375


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KGLDLLRT 8
+G+DL+RT
Sbjct: 628 RGVDLMRT 635


>sp|Y1003_ARCFU|UNCHARACTERIZED protein AF_1003|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LDLLRTE 9
+DLLRTE
Sbjct: 1 MDLLRTE 7


>sp|AATD_THEVO|A-TYPE ATP synthase subunit D|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KGLDLLR 7
KGLDLL+
Sbjct: 22 KGLDLLK 28


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KGLDLLRTET 10
+G+D++RT+
Sbjct: 1066 RGIDVIRTKV 1075




16|SequenceR|85|76|TKIRNKGLDL

>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 IRNKGLDL 10
+RNKG+D+
Sbjct: 859 LRNKGIDI 866


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 TKIRNKGLDL 10
T I KGLDL
Sbjct: 168 TDILRKGLDL 177


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KIRNKGLDL 10
K+RNKG +L
Sbjct: 762 KLRNKGYNL 770


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 2 KIRNKGLDL 10
K+RNK LD+
Sbjct: 161 KVRNKFLDI 169


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KIRNKGLD 9
KIRN G D
Sbjct: 545 KIRNAGTD 552


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KIRNKGLD 9
KIRN G D
Sbjct: 545 KIRNAGTD 552


>sp|GFCR_METST|TRANSCRIPTIONAL regulator GfcR|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TKIRNKGL 8
T++RNKGL
Sbjct: 10 TELRNKGL 17


>sp|UPP_METS5|URACIL phosphoribosyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 TKIRNKGLDL 10
TKIRNK D+
Sbjct: 176 TKIRNKYPDV 185


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KIRNKGLD 9
K+R +GLD
Sbjct: 103 KLRERGLD 110


>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KIRNKGLDL 10
K+R KG+D+
Sbjct: 388 KLREKGIDV 396




17|SequenceR|90|81|EDQNLTKIRN

>sp|Y2048_ARCFU|UNCHARACTERIZED protein AF_2048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EDQNLTKIRN 10
ED+N TK+ N
Sbjct: 279 EDKNFTKVVN 288


>sp|HMDH_SACS2|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DQNLTKIRN 10
++NL KIRN
Sbjct: 150 EENLEKIRN 158


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EDQNLT 6
EDQNLT
Sbjct: 119 EDQNLT 124


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 4 NLTKIRN 10
NLT+IRN
Sbjct: 328 NLTEIRN 334


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EDQNLTKIR 9
ED+N+ KI+
Sbjct: 97 EDENMPKIK 105




18|SequenceR|95|86|PFSAFEDQNL

>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 1 PFSAFEDQNL 10
PF AFE+ NL
Sbjct: 92 PFHAFEEANL 101


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 1 PFSAFEDQNL 10
PF AFE+ NL
Sbjct: 92 PFHAFEEANL 101


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi

Query: 1 PFSAFEDQ 8
P S FEDQ
Sbjct: 89 PLSGFEDQ 96


>sp|EF1A_METTH|ELONGATION factor 1-alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PFSAFEDQNL 10
P SAFE N+
Sbjct: 173 PLSAFEGDNI 182


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PFSAFEDQNL 10
P SAFE N+
Sbjct: 183 PISAFEGDNI 192


>sp|TRUA_METST|TRNA pseudouridine synthase A|Methanosphaera stadtmanae (strain ATCC

Query: 1 PFSAFEDQNL 10
P S FE +NL
Sbjct: 114 PISPFEKKNL 123


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 PFSAFEDQNL 10
PFS F D ++
Sbjct: 876 PFSKFSDMDV 885


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 1 PFSAFEDQNL 10
P SAFE N+
Sbjct: 173 PISAFEGDNV 182


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 1 PFSAFEDQNL 10
PFS F D ++
Sbjct: 876 PFSKFNDMDV 885


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 AFEDQNL 10
++EDQNL
Sbjct: 117 SYEDQNL 123


>sp|Y807_METJA|PUTATIVE lyase MJ0807|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFSAFEDQNL 10
PF E++NL
Sbjct: 87 PFKNIEEENL 96


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 FEDQNL 10
FEDQN+
Sbjct: 300 FEDQNI 305


>sp|MFND_METJA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SAFEDQNL 10
S FED+N+
Sbjct: 27 SGFEDKNI 34


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PFSAFEDQNL 10
P SAFE N+
Sbjct: 182 PISAFEGDNV 191




19|SequenceR|100|91|LEELHPFSAF

>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 LEELHPFS 8
LEE+ PFS
Sbjct: 241 LEEVEPFS 248


>sp|Y1408_METJA|UNCHARACTERIZED protein MJ1408|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEELHPFSAF 10
LE++HP AF
Sbjct: 144 LEQIHPEMAF 153


>sp|PSB1_HALMA|PROTEASOME subunit beta 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 LEELHPFSAF 10
+EE+HP +A
Sbjct: 81 VEEIHPTAAL 90


>sp|PSB_HALUD|PROTEASOME subunit beta|Halorhabdus utahensis (strain DSM 12940

Query: 1 LEELHPFSA 9
+EE+HP +A
Sbjct: 74 VEEIHPTAA 82


>sp|TPIS_METLZ|TRIOSEPHOSPHATE isomerase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 ELHPF 7
ELHPF
Sbjct: 47 ELHPF 51


>sp|AROD_THEON|3-DEHYDROQUINATE dehydratase|Thermococcus onnurineus (strain NA1)

Query: 1 LEELHPFS 8
LEEL PF+
Sbjct: 39 LEELEPFA 46


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LEELHPFSA 9
+EE++PF+A
Sbjct: 421 MEEVYPFNA 429


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LEELHPFSA 9
+EE++PF+A
Sbjct: 421 MEEVYPFNA 429


>sp|MTRC_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus vannielii (strain ATCC

Query: 4 LHPFSA 9
LHPF+A
Sbjct: 193 LHPFNA 198


>sp|MTRC_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain DSM

Query: 4 LHPFSA 9
LHPF+A
Sbjct: 186 LHPFNA 191


>sp|MTRC_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanosarcina mazei (strain ATCC

Query: 4 LHPFSA 9
LHPF+A
Sbjct: 181 LHPFNA 186


>sp|MTRC_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain C7

Query: 4 LHPFSA 9
LHPF+A
Sbjct: 186 LHPFNA 191


>sp|MTRC_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanopyrus kandleri (strain AV19 /

Query: 4 LHPFSA 9
LHPF+A
Sbjct: 194 LHPFNA 199


>sp|MTRC_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanosarcina barkeri (strain Fusaro

Query: 4 LHPFSA 9
LHPF+A
Sbjct: 181 LHPFNA 186


>sp|MTRC_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanosarcina acetivorans (strain

Query: 4 LHPFSA 9
LHPF+A
Sbjct: 181 LHPFNA 186


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LEELHPFSA 9
+EE++PF+A
Sbjct: 421 MEEVYPFNA 429


>sp|PSB_HALWD|PROTEASOME subunit beta|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LEELHPFSAF 10
+EE+HP A
Sbjct: 83 VEEIHPTGAL 92


>sp|PSB_HALVD|PROTEASOME subunit beta|Haloferax volcanii (strain ATCC 29605

Query: 1 LEELHPFSAF 10
+EE+HP A
Sbjct: 83 VEEIHPTGAL 92


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 1 LEELHP 6
LE+LHP
Sbjct: 691 LEQLHP 696


>sp|MTRC_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain C5

Query: 4 LHPFSA 9
LHPF+A
Sbjct: 186 LHPFNA 191


>sp|MTRC_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanocaldococcus jannaschii (strain

Query: 4 LHPFSA 9
LHPF+A
Sbjct: 188 LHPFNA 193


>sp|CS3HE_METJA|CRISPR-ASSOCIATED helicase Cas3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEELHPFSAF 10
LEE H F F
Sbjct: 117 LEETHAFLGF 126


>sp|TRPE_SACS2|ANTHRANILATE synthase component 1|Saccharolobus solfataricus (strain ATCC

Query: 3 ELHPFSAF 10
E+HP S F
Sbjct: 2 EVHPISEF 9


>sp|SYK_METMJ|LYSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LEELHPF 7
LEELH F
Sbjct: 335 LEELHAF 341


>sp|TRUA_METKA|TRNA pseudouridine synthase A|Methanopyrus kandleri (strain AV19 /

Query: 1 LEELHPFSAF 10
LE H FSAF
Sbjct: 124 LEGKHDFSAF 133




20|SequenceR|105|96|NENLELEELH

>sp|PSB2_IGNH4|PROTEASOME subunit beta 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 NENLELEEL 9
N N++LEEL
Sbjct: 156 NPNMDLEEL 164


>sp|FLAF_METVO|PUTATIVE flagella-related protein F|Methanococcus voltae

Query: 1 NENLELEEL 9
NENLEL E+
Sbjct: 50 NENLELVEI 58


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 2 ENLELEEL 9
EN ELEE+
Sbjct: 460 ENAELEEI 467


>sp|PURP_METM7|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C7 /

Query: 1 NENLEL 6
NENLEL
Sbjct: 301 NENLEL 306


>sp|PURP_METM6|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C6 /

Query: 1 NENLEL 6
NENLEL
Sbjct: 301 NENLEL 306


>sp|PYRDB_METJA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocaldococcus jannaschii

Query: 2 ENLELEEL 9
ENL LEE+
Sbjct: 293 ENLTLEEI 300


>sp|T2M3_METJA|TYPE II restriction enzyme MjaIII|Methanocaldococcus jannaschii

Query: 1 NENLELEEL 9
NEN+ELE L
Sbjct: 82 NENMELETL 90


>sp|PGK2_PYRHO|2-PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ENLELEE 8
EN+ELEE
Sbjct: 267 ENVELEE 273


>sp|PURP_METMP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain DSM

Query: 1 NENLEL 6
NENLEL
Sbjct: 301 NENLEL 306


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 NENLELEEL 9
N LELEEL
Sbjct: 400 NLGLELEEL 408


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 NENLELEEL 9
NEN+EL L
Sbjct: 455 NENMELNAL 463




21|SequenceR|110|101|VASVINENLE

>sp|Y1498_SULAC|PARB-LIKE protein Saci_1498|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VASVINENLE 10
+ S++NEN+E
Sbjct: 21 ILSIVNENIE 30


>sp|TRM1_THEAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma acidophilum

Query: 2 ASVINENLE 10
ASVIN++ E
Sbjct: 96 ASVINDSFE 104


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 4 VINENLE 10
+INEN+E
Sbjct: 233 IINENVE 239


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 VINENLE 10
+INEN+E
Sbjct: 144 IINENVE 150




22|SequenceR|115|106|FAGPEVASVI

>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 1 FAGPEVA 7
F GPE+A
Sbjct: 29 FEGPEIA 35


>sp|G3P_METVS|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GPEVASVI 10
GP+V SVI
Sbjct: 196 GPDVVSVI 203


>sp|ENO_AERPE|ENOLASE pernix (strain ATCC 700893

Query: 1 FAGPEVASVI 10
+AGPE+ V+
Sbjct: 420 YAGPELRGVM 429


>sp|G3P_METM5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 3 GPEVASVI 10
GP+V SVI
Sbjct: 196 GPDVVSVI 203


>sp|G3P_METM7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 3 GPEVASVI 10
GP+V SVI
Sbjct: 196 GPDVVSVI 203


>sp|G3P_METM6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 3 GPEVASVI 10
GP+V SVI
Sbjct: 196 GPDVVSVI 203


>sp|G3P_METMP|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GPEVASVI 10
GP+V SVI
Sbjct: 196 GPDVVSVI 203


>sp|BACR3_HALSD|ARCHAERHODOPSIN-3 sodomense

Query: 3 GPEVAS 8
GPEVAS
Sbjct: 174 GPEVAS 179


>sp|BACR1_HALSS|ARCHAERHODOPSIN-1 sp. (strain SG1)

Query: 3 GPEVAS 8
GPEVAS
Sbjct: 176 GPEVAS 181


>sp|BACR1_HALEZ|ARCHAERHODOPSIN-1 ezzemoulense (Halorubrum chaoviator)

Query: 3 GPEVAS 8
GPEVAS
Sbjct: 176 GPEVAS 181


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 4 PEVASVI 10
PEVASV+
Sbjct: 352 PEVASVV 358


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GPEVASVI 10
GP+V SVI
Sbjct: 196 GPDVRSVI 203




23|SequenceR|120|111|NFLNNFAGPE

>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LNNFAGP 9
LNN+ GP
Sbjct: 188 LNNYGGP 194


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 5 NFAGPE 10
N+AGPE
Sbjct: 284 NYAGPE 289


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NFLNNFAGP 9
+FL +F GP
Sbjct: 128 SFLKDFKGP 136


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 3 LNNFAGP 9
+NNF GP
Sbjct: 284 INNFFGP 290


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NFLNNFAGPE 10
N NN GPE
Sbjct: 80 NISNNITGPE 89




24|SequenceR|125|116|GLTRLNFLNN

>sp|Y1078_ARCFU|UNCHARACTERIZED protein AF_1078|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TRLNFLNN 10
RLNFLN+
Sbjct: 11 KRLNFLNS 18




25|SequenceR|130|121|RNSRLGLTRL

>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RNSRLGLTR 9
RN+RLGL R
Sbjct: 529 RNARLGLVR 537


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RNSRLGL 7
RNS+LGL
Sbjct: 186 RNSKLGL 192


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 SRLGLTR 9
SRLGLTR
Sbjct: 279 SRLGLTR 285


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 3 SRLGLTRL 10
SRLGL+R+
Sbjct: 323 SRLGLSRV 330




26|SequenceR|135|126|PILKLRNSRL

>sp|REG1_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH0045|Pyrococcus horikoshii

Query: 1 PILKLRN 7
PILK+RN
Sbjct: 88 PILKMRN 94


>sp|LADH_METM7|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 PILKLRNS 8
PILK++NS
Sbjct: 374 PILKVKNS 381


>sp|REG1_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB00550|Pyrococcus abyssi

Query: 1 PILKLRN 7
PIL++RN
Sbjct: 88 PILRMRN 94


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 PILKLRN 7
P++KLRN
Sbjct: 367 PVVKLRN 373


>sp|RRP4_THEPD|EXOSOME complex component Rrp4|Thermofilum pendens (strain DSM 2475

Query: 1 PILKLRNSRL 10
P+L ++ SRL
Sbjct: 139 PVLTIKESRL 148




27|SequenceR|140|131|TFVGLPILKL

>sp|Y1495_METJA|UNCHARACTERIZED protein MJ1495|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TFVGLPILKL 10
TF+G+PI K
Sbjct: 70 TFLGIPIYKF 79


>sp|Y570_METJA|UNCHARACTERIZED protein MJ0570|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VGLPILKL 10
VG+P++KL
Sbjct: 58 VGIPLIKL 65


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FVGLPILKL 10
+VG+P+ K+
Sbjct: 81 YVGMPLCKI 89


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FVGLPILKL 10
FVG+ ++KL
Sbjct: 259 FVGIALIKL 267




28|SequenceR|145|136|LNSLGTFVGL

>sp|Y281_PYRHO|UPF0113 protein PH0281|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 SLGTFVG 9
SLGTFVG
Sbjct: 71 SLGTFVG 77


>sp|GLCT_SACS2|GLUCOSE import system permease protein|Saccharolobus solfataricus (strain

Query: 1 LNSLGTFVGL 10
LNS TFVGL
Sbjct: 38 LNSKPTFVGL 47


>sp|GCH3_METVS|GTP cyclohydrolase III|Methanococcus vannielii (strain ATCC 35089

Query: 2 NSLGTFVG 9
NS+G F+G
Sbjct: 174 NSMGFFIG 181


>sp|Y791_METB6|UPF0316 protein Mboo_0791|Methanoregula boonei (strain DSM 21154

Query: 3 SLGTFVGL 10
+LGT+VGL
Sbjct: 104 ALGTYVGL 111


>sp|F16A2_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 NSLGTFVGL 10
NS+GT +G+
Sbjct: 95 NSVGTIIGV 103


>sp|QUEC_PICTO|7-CYANO-7-DEAZAGUANINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 SLGTFVGL 10
SLGT +GL
Sbjct: 146 SLGTSIGL 153




29|SequenceR|150|141|IDLKTLNSLG

>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 3 LKTLNSLG 10
L T+NSLG
Sbjct: 210 LDTINSLG 217


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 3 LKTLNSLG 10
LK+LN+LG
Sbjct: 261 LKSLNNLG 268




30|SequenceR|155|146|IKNESIDLKT

>sp|SECF_METTH|PROTEIN-EXPORT membrane protein SecF|Methanothermobacter thermautotrophicus

Query: 3 NESIDLK 9
NES+DLK
Sbjct: 42 NESVDLK 48


>sp|ARFB_METM7|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C7 /

Query: 2 KNESIDLKT 10
KNE+IDL+
Sbjct: 179 KNEAIDLEA 187


>sp|COPP_THEAC|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 1 IKNESIDLKT 10
+KNE+ +LKT
Sbjct: 180 VKNENYNLKT 189


>sp|ARFB_METM6|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C6 /

Query: 2 KNESIDLKT 10
KNE+IDL+
Sbjct: 179 KNEAIDLEA 187


>sp|ARFB_METMP|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain DSM

Query: 2 KNESIDLKT 10
KNE+IDL+
Sbjct: 179 KNEAIDLEA 187


>sp|ARFB_METM5|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C5 /

Query: 2 KNESIDLKT 10
KNE+IDL+
Sbjct: 179 KNEAIDLEA 187


>sp|PNPH_ARCFU|PROBABLE 6-oxopurine nucleoside phosphorylase|Archaeoglobus fulgidus (strain

Query: 1 IKNESIDLK 9
IKN+SID +
Sbjct: 203 IKNQSIDYR 211


>sp|RS5_THEVO|SMALL ribosomal subunit protein uS5|Thermoplasma volcanium (strain ATCC

Query: 1 IKNESIDLK 9
IK+E ID+K
Sbjct: 46 IKDEVIDIK 54


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKNESIDLKT 10
+KN ID+KT
Sbjct: 100 LKNTKIDIKT 109


>sp|MTM6_METJA|TYPE II methyltransferase M.MjaVI|Methanocaldococcus jannaschii

Query: 1 IKNESIDL 8
+ NESIDL
Sbjct: 27 LPNESIDL 34


>sp|Y625_THEVO|UPF0147 protein TV0625|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KNESIDLK 9
+NES+DL+
Sbjct: 44 ENESLDLR 51


>sp|Y600_THEAC|UPF0147 protein Ta0600|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KNESIDLK 9
+NES+DL+
Sbjct: 43 ENESLDLR 50




31|SequenceR|160|151|DLLIVIKNES

>sp|PIMT_METTP|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DLLIVIKN 8
DLL+V KN
Sbjct: 176 DLLVVTKN 183


>sp|G3PP_PYRAB|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 DLLIVIKNES 10
DLL VI+NE+
Sbjct: 219 DLLKVIENEN 228


>sp|RS13_THEPD|SMALL ribosomal subunit protein uS13|Thermofilum pendens (strain DSM 2475

Query: 1 DLLIVIKNE 9
DLLI ++N+
Sbjct: 98 DLLITVRND 106




32|SequenceR|165|156|DQFMYDLLIV

>sp|PSB2_SULTO|PROTEASOME subunit beta 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QFMYDLL 8
QF+YDLL
Sbjct: 66 QFIYDLL 72


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FMYDLLI 9
F+YD+L+
Sbjct: 29 FLYDILV 35


>sp|PSB2_SACS2|PROTEASOME subunit beta 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QFMYDLL 8
QF+YD+L
Sbjct: 67 QFIYDVL 73


>sp|PSB2_SACI1|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 QFMYDLL 8
QF+YD+L
Sbjct: 70 QFIYDVL 76


>sp|PSB1_SACI9|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain L.D.8.5 /

Query: 2 QFMYDLL 8
QF+YD+L
Sbjct: 70 QFIYDVL 76


>sp|PSB1_SACI7|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 QFMYDLL 8
QF+YD+L
Sbjct: 70 QFIYDVL 76


>sp|PSB1_SACI6|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.16.4 /

Query: 2 QFMYDLL 8
QF+YD+L
Sbjct: 70 QFIYDVL 76


>sp|PSB1_SACI4|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.14.25 /

Query: 2 QFMYDLL 8
QF+YD+L
Sbjct: 70 QFIYDVL 76


>sp|PSB1_SACI3|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.16.27)

Query: 2 QFMYDLL 8
QF+YD+L
Sbjct: 70 QFIYDVL 76


>sp|PSB1_SACI2|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 QFMYDLL 8
QF+YD+L
Sbjct: 70 QFIYDVL 76


>sp|PSB2_SACS9|PROTEASOME subunit beta 2|Saccharolobus solfataricus (strain 98/2)

Query: 2 QFMYDLL 8
QF+YD+L
Sbjct: 70 QFIYDVL 76


>sp|Y896_ARCFU|UNCHARACTERIZED protein AF_0896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DQFMYDL 7
D+F+YDL
Sbjct: 51 DEFLYDL 57




33|SequenceR|170|161|KLNYLDQFMY

>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LNYLDQFMY 10
NY D+F+Y
Sbjct: 154 FNYPDKFLY 162


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 2 LNYLDQFM 9
L+YLD+F+
Sbjct: 230 LDYLDEFL 237


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LNYLDQFMY 10
NY D+F+Y
Sbjct: 148 FNYPDKFIY 156


>sp|GGR_THEVO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NYLDQFM 9
NYLD+F+
Sbjct: 239 NYLDRFI 245


>sp|GGR_THEAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NYLDQFM 9
NYLD+F+
Sbjct: 239 NYLDRFI 245


>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LNYLDQFM 9
++YLD+F+
Sbjct: 230 IDYLDEFL 237


>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 2 LNYLDQFM 9
++YLD+F+
Sbjct: 230 IDYLDEFL 237


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KLNYLDQFM 9
KL Y DQ+M
Sbjct: 506 KLYYKDQYM 514


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KLNYLDQFM 9
KL Y DQ+M
Sbjct: 506 KLYYKDQYM 514


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLNYLDQFM 9
KL Y DQ+M
Sbjct: 506 KLYYKDQYM 514


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KLNYLDQFM 9
KL Y DQ+M
Sbjct: 506 KLYYKDQYM 514


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KLNYLDQFM 9
KL Y DQ+M
Sbjct: 506 KLYYKDQYM 514


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KLNYLDQFM 9
KL Y DQ+M
Sbjct: 506 KLYYKDQYM 514


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KLNYLDQFM 9
KL Y DQ+M
Sbjct: 506 KLYYKDQYM 514


>sp|HIS4_THEKO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Thermococcus kodakarensis (strain

Query: 3 NYLDQFMY 10
NY+++F+Y
Sbjct: 153 NYVNRFVY 160


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 2 LNYLDQFM 9
++YLD+F+
Sbjct: 230 IDYLDEFL 237


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 KLNYLDQFMY 10
KL Y D+F Y
Sbjct: 475 KLGYGDKFNY 484


>sp|Y103_SACS2|PROTEIN SSO0103|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LNYLDQFMY 10
L YL+ F+Y
Sbjct: 186 LKYLEDFIY 194


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 LNYLDQFMY 10
L YL+ F+Y
Sbjct: 178 LKYLEDFIY 186


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LNYLDQFMY 10
L YL+ F+Y
Sbjct: 178 LKYLEDFIY 186


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LNYLDQFMY 10
L YL+ F+Y
Sbjct: 178 LKYLEDFIY 186


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LNYLDQFMY 10
L YL+ F+Y
Sbjct: 178 LKYLEDFIY 186


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LNYLDQFMY 10
L YL+ F+Y
Sbjct: 178 LKYLEDFIY 186


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LNYLDQFMY 10
L YL+ F+Y
Sbjct: 178 LKYLEDFIY 186




34|SequenceR|175|166|GVELSKLNYL

>sp|PYRH_IGNH4|URIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GVELSKLNYL 10
G+E+S+LN L
Sbjct: 65 GIEVSRLNAL 74


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVELSKLNY 9
G+EL + NY
Sbjct: 633 GIELREFNY 641


>sp|ARFB_METM6|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C6 /

Query: 3 ELSKLNY 9
ELSKLN+
Sbjct: 117 ELSKLNF 123


>sp|HOSA_SULTO|HOMOCITRATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVELSKLNYL 10
G+E+ KLN L
Sbjct: 248 GIEVVKLNKL 257


>sp|FUCA_META3|L-FUCULOSE phosphate aldolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 ELSKLNYL 10
E+S+LNY+
Sbjct: 169 EISQLNYI 176


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 1 GVELSKLNY 9
GVE+S L Y
Sbjct: 372 GVEVSDLEY 380




35|SequenceR|180|171|VLDNDGVELS

>sp|EPPA_METJA|PREPILIN peptidase EppA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLDNDGVEL 9
++D DGVE+
Sbjct: 250 IIDKDGVEV 258


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 1 VLDNDGVEL 9
V+DN GVEL
Sbjct: 221 VVDNLGVEL 229


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VLDNDGVELS 10
+ DN+GV++S
Sbjct: 172 IADNEGVKIS 181


>sp|TRUA_THEAC|TRNA pseudouridine synthase A|Thermoplasma acidophilum (strain ATCC

Query: 1 VLDNDGVE 8
+LDN GVE
Sbjct: 180 ILDNIGVE 187


>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VLDNDGVEL 9
V+D DG+E+
Sbjct: 108 VVDKDGIEI 116


>sp|Y1638_METJA|UNCHARACTERIZED protein MJ1638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLDNDGVEL 9
+L N+G+EL
Sbjct: 201 ILKNNGIEL 209


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 2 LDNDGVEL 9
L+NDG E+
Sbjct: 526 LENDGTEV 533


>sp|TRUD_THESM|PROBABLE tRNA pseudouridine synthase D|Thermococcus sibiricus (strain DSM

Query: 1 VLDNDGVELS 10
+LD +G++L+
Sbjct: 355 ILDEEGIDLN 364


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VLDNDGVEL 9
+L+N+G EL
Sbjct: 317 MLENEGAEL 325


>sp|FLAB4_NATMM|FLAGELLIN B4|Natrialba magadii (strain ATCC 43099

Query: 1 VLDNDGVELS 10
VLDND EL+
Sbjct: 183 VLDNDNGELT 192




36|SequenceR|185|176|RHSIYVLDND

>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 3 SIYVLDN 9
S+YVLDN
Sbjct: 98 SVYVLDN 104


>sp|Y889_METJA|UNCHARACTERIZED protein MJ0889|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HSIYVLDND 10
+S Y+LDND
Sbjct: 23 YSYYILDND 31


>sp|DTDA_PYRHO|D-AMINOACYL-TRNA deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 IYVLDN 9
IYVLDN
Sbjct: 176 IYVLDN 181


>sp|DMO1_DESMO|HOMING endonuclease I-DmoI|Desulfurococcus mucosus (Desulfurococcus

Query: 1 RHSIYVLD 8
RH +YVL+
Sbjct: 157 RHGVYVLN 164


>sp|DTDA_PYRAB|D-AMINOACYL-TRNA deacylase|Pyrococcus abyssi (strain GE5 /

Query: 4 IYVLDN 9
+YVLDN
Sbjct: 176 VYVLDN 181


>sp|THIM2_METST|HYDROXYETHYLTHIAZOLE kinase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 SIYVLDN 9
SIY++DN
Sbjct: 190 SIYLIDN 196




37|SequenceR|190|181|LGSFARHSIY

>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SFARHSIY 10
SFA+HS Y
Sbjct: 239 SFAKHSYY 246


>sp|DCD_STAMF|DCTP deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 3 SFARHSIY 10
+FAR+S+Y
Sbjct: 104 TFARYSLY 111


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SFARHSIY 10
SFA+HS Y
Sbjct: 256 SFAKHSHY 263


>sp|HIS7_METAC|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LGSFARHS 8
L SF+RHS
Sbjct: 40 LASFSRHS 47


>sp|HIS7_METMA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LGSFARHS 8
L SFARH+
Sbjct: 40 LSSFARHA 47


>sp|HIS7_METBF|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LGSFARHS 8
L SFARH+
Sbjct: 40 LTSFARHA 47


>sp|HIS7_METMJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LGSFARH 7
L SFARH
Sbjct: 40 LASFARH 46




38|SequenceR|195|186|QELSNLGSFA

>sp|Y356_METJA|UNCHARACTERIZED protein MJ0356|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QELSNLGSF 9
+E+SN+GSF
Sbjct: 31 KEISNVGSF 39


>sp|PELO_HALMA|PROTEIN pelota homolog|Haloarcula marismortui (strain ATCC 43049

Query: 1 QELSNLGSFA 10
Q+LSNLG A
Sbjct: 338 QQLSNLGGVA 347


>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 1 QELSNLGSFA 10
QELS LGS A
Sbjct: 206 QELSKLGSKA 215


>sp|PELO_NATPD|PROTEIN pelota homolog|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QELSNLGSFA 10
Q+L+NLG A
Sbjct: 338 QQLANLGGIA 347


>sp|DTDA_CALMQ|D-AMINOACYL-TRNA deacylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 QELSNLG 7
+ELSNLG
Sbjct: 256 KELSNLG 262


>sp|DCD_HALLT|DCTP deaminase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 ELSNLGS 8
ELSNLG+
Sbjct: 133 ELSNLGT 139


>sp|DCD_HALMA|DCTP deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ELSNLGS 8
ELSNLG+
Sbjct: 133 ELSNLGT 139


>sp|DCD_NATPD|DCTP deaminase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ELSNLGS 8
ELSNLG+
Sbjct: 133 ELSNLGT 139


>sp|DCD_HALWD|DCTP deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ELSNLGS 8
ELSNLG+
Sbjct: 133 ELSNLGT 139


>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 2 ELSNLGS 8
ELSNLG+
Sbjct: 81 ELSNLGN 87




39|SequenceR|200|191|KELTLQELSN

>sp|Y1330_METJA|UNCHARACTERIZED protein MJ1330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KELTLQELSN 10
KE+ L++LSN
Sbjct: 23 KEILLKQLSN 32


>sp|DHYS_SULTO|PROBABLE deoxyhypusine synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KELTLQEL 8
K+LTL+EL
Sbjct: 12 KDLTLEEL 19




40|SequenceR|205|196|STLNCKELTL

>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 1 STLNCKELTL 10
+ +NC E+TL
Sbjct: 107 AVVNCGEVTL 116


>sp|GUAAA_METST|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosphaera

Query: 4 NCKELTL 10
NCKE+ L
Sbjct: 60 NCKEIIL 66


>sp|NADE_META3|NH(3)-DEPENDENT NAD(+) synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LNCKELT 9
+NC+ELT
Sbjct: 1 MNCEELT 7




41|SequenceR|210|201|AETPISTLNC

>sp|BIOW_META3|6-CARBOXYHEXANOATE--COA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 PISTLNC 10
PI T+NC
Sbjct: 70 PIKTINC 76


>sp|PURP_PYRNV|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum neutrophilum (strain DSM

Query: 2 ETPISTLNC 10
E P+ TL C
Sbjct: 108 EAPVPTLGC 116


>sp|PURP_PYRIL|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 ETPISTLNC 10
E P+ TL C
Sbjct: 97 EAPVPTLGC 105


>sp|PURP_PYRCJ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum calidifontis (strain DSM

Query: 2 ETPISTLNC 10
E P+ TL C
Sbjct: 96 EAPVPTLGC 104


>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 2 ETPISTLNC 10
E P+ TL C
Sbjct: 98 EAPVPTLGC 106


>sp|PURP_PYRAE|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum aerophilum (strain ATCC

Query: 2 ETPISTLNC 10
E P+ TL C
Sbjct: 104 EAPVPTLGC 112


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ETPISTL 8
ETP+ST+
Sbjct: 193 ETPVSTI 199


>sp|Y2613_METAC|UNCHARACTERIZED serpin-like protein MA_2613/MA_2612|Methanosarcina acetivorans

Query: 1 AETPISTLN 9
A TPI+T+N
Sbjct: 21 AVTPINTIN 29


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ETPISTLNC 10
E P+ LNC
Sbjct: 13 ERPVVLLNC 21


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AETPISTLN 9
A+TPI +N
Sbjct: 568 ADTPIEVIN 576


>sp|COBS_METKA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 TPISTLNC 10
+P++TL C
Sbjct: 187 SPVATLTC 194


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 TPISTLNC 10
TP+S + C
Sbjct: 248 TPVSVIEC 255




42|SequenceR|215|206|HLHSLAETPI

>sp|TRUA_THEAC|TRNA pseudouridine synthase A|Thermoplasma acidophilum (strain ATCC

Query: 1 HLHSLAETP 9
++HS AE P
Sbjct: 84 YVHSYAEVP 92


>sp|LEU1_SULTO|2-ISOPROPYLMALATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HLHSLAETPI 10
H+H + E P+
Sbjct: 298 HVHGVIENPL 307


>sp|LEU1_SULAC|2-ISOPROPYLMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HLHSLAETPI 10
H+H + E P+
Sbjct: 298 HVHGVIENPM 307




43|SequenceR|220|211|LVILGHLHSL

>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VILGHLH 8
+ILGH+H
Sbjct: 60 LILGHMH 66


>sp|G1PDH_CALMQ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Caldivirga maquilingensis (strain ATCC

Query: 1 LVILGHLHS 9
L+I GH+HS
Sbjct: 37 LIITGHIHS 45


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VILGHLH 8
+ILGH H
Sbjct: 55 IILGHAH 61


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VILGHLH 8
+ILGH H
Sbjct: 55 IILGHAH 61


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VILGHLH 8
+ILGH H
Sbjct: 55 IILGHAH 61


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VILGHLH 8
+ILGH H
Sbjct: 55 IILGHAH 61


>sp|MTSB_METBA|METHYLATED-THIOL--CORRINOID protein MtsB|Methanosarcina barkeri

Query: 1 LVILGHLHSL 10
LVI+G LH +
Sbjct: 151 LVIVGDLHDI 160


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 LVILGHLHS 9
+ I GH+HS
Sbjct: 425 IFITGHIHS 433


>sp|MRE11_SULAC|DNA double-strand break repair protein|Sulfolobus acidocaldarius

Query: 1 LVILGHLHS 9
L +GHLHS
Sbjct: 182 LYAVGHLHS 190


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 4 LGHLHS 9
LGHLH+
Sbjct: 197 LGHLHA 202


>sp|GATD_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 4 LGHLHS 9
LGH+HS
Sbjct: 333 LGHVHS 338


>sp|GATD_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 4 LGHLHS 9
LGH+HS
Sbjct: 333 LGHVHS 338


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VILGHLH 8
+ILGH H
Sbjct: 70 IILGHAH 76


>sp|PELO_HALWD|PROTEIN pelota homolog|Haloquadratum walsbyi (strain DSM 16790

Query: 4 LGHLHSL 10
LGH H+L
Sbjct: 97 LGHYHTL 103


>sp|NADM_AERPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LGHLHSL 10
LGHLH++
Sbjct: 15 LGHLHTI 21


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LVILGHLHSL 10
++I GH H+L
Sbjct: 251 IMITGHQHAL 260


>sp|Y388_METJA|UNCHARACTERIZED protein MJ0388|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ILGHLHSL 10
ILG LH L
Sbjct: 124 ILGELHEL 131


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 5 GHLHS 9
GHLHS
Sbjct: 46 GHLHS 50


>sp|MRE11_THEVO|DNA double-strand break repair protein|Thermoplasma volcanium (strain

Query: 2 VILGHLHSL 10
+ +GHLH
Sbjct: 189 IAMGHLHDF 197


>sp|MRE11_THEAC|DNA double-strand break repair protein|Thermoplasma acidophilum (strain

Query: 2 VILGHLHSL 10
+ +GHLH
Sbjct: 185 IAMGHLHDF 193


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain

Query: 2 VILGHLH 8
+ILGH H
Sbjct: 58 LILGHAH 64


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VILGHLH 8
+ILGH H
Sbjct: 58 LILGHAH 64


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 2 VILGHLH 8
+ILGH H
Sbjct: 65 LILGHAH 71


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 ILGHLHSL 10
I GH+H L
Sbjct: 21 IAGHVHEL 28


>sp|GSA_METMJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VILGHLH 8
+ILGH H
Sbjct: 58 LILGHAH 64


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VILGHLH 8
+ILGH H
Sbjct: 58 LILGHAH 64


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VILGHLHS 9
V++GH++S
Sbjct: 189 VVIGHVYS 196


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 2 VILGHLH 8
V++GH H
Sbjct: 246 VVIGHAH 252




44|SequenceR|225|216|LHRLRLVILG

>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 LHRLRLVI 8
LHR+RL I
Sbjct: 353 LHRIRLQI 360


>sp|RPO3_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo3|Aeropyrum pernix (strain ATCC 700893

Query: 2 HRLRLVIL 9
HRL LV+L
Sbjct: 66 HRLGLVVL 73


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 LHRLRLVI 8
LHR+RL I
Sbjct: 353 LHRIRLQI 360


>sp|NCPP_METJA|PROBABLE inosine/xanthosine triphosphatase|Methanocaldococcus jannaschii

Query: 2 HRLRLVILG 10
H+LR+V +G
Sbjct: 4 HKLRIVAVG 12


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 2 HRLRLVILG 10
HR RL++ G
Sbjct: 212 HRYRLIVNG 220




45|SequenceR|230|221|IANINLHRLR

>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 2 ANINLHRLR 10
AN+ LHRLR
Sbjct: 112 ANVLLHRLR 120


>sp|TRM1_PYRNV|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum neutrophilum

Query: 2 ANINLHRLR 10
AN+ LHRL+
Sbjct: 110 ANVLLHRLK 118


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 2 ANINLHRLR 10
AN+ LH+LR
Sbjct: 114 ANVLLHKLR 122


>sp|PSB_ACIB4|PROTEASOME subunit beta|Aciduliprofundum boonei (strain DSM 19572

Query: 2 ANINLHRLR 10
A INL+R+R
Sbjct: 68 AEINLYRIR 76


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IANINLHRLR 10
+ NIN+ R+R
Sbjct: 353 VTNINIERIR 362


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 2 ANINLHRLR 10
AN+ LH+LR
Sbjct: 110 ANVLLHKLR 118


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 IANINLHR 8
IA+IN+H+
Sbjct: 272 IAHINIHK 279


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 3 NINLHR 8
NIN+HR
Sbjct: 175 NINVHR 180


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IANINLH 7
IAN++LH
Sbjct: 2 IANVDLH 8


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 2 ANINLHRLR 10
AN+ LH+L+
Sbjct: 112 ANVLLHKLK 120




46|SequenceR|235|226|FSYDRIANIN

>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 1 FSYDRIANIN 10
FS+D++AN++
Sbjct: 123 FSFDKVANLS 132


>sp|MFNA_METBF|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina barkeri (strain

Query: 1 FSYDRIANI 9
FS+D++AN+
Sbjct: 137 FSFDKVANM 145


>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix thermoacetophila

Query: 1 FSYDRIANI 9
FS+D+IA++
Sbjct: 122 FSFDKIADL 130


>sp|GLMM_PYRHO|PROBABLE phosphoglucosamine mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FSYDRIANIN 10
FSY+RI I+
Sbjct: 388 FSYERIITID 397


>sp|HEM1_PICTO|GLUTAMYL-TRNA reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 FSYDRIANIN 10
+SYD I N+N
Sbjct: 210 YSYDSIKNLN 219


>sp|PHOU_ARCFU|PHOSPHATE-SPECIFIC transport system accessory protein|Archaeoglobus fulgidus (strain

Query: 2 SYDRIANI 9
SY+RIA+I
Sbjct: 87 SYERIADI 94


>sp|PANB_METS5|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 3 YDRIANI 9
Y+R+ANI
Sbjct: 120 YERVANI 126


>sp|PYRK_METMA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina mazei

Query: 2 SYDRIA 7
SYDRIA
Sbjct: 172 SYDRIA 177


>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 1 FSYDRIANI 9
FS+D++A++
Sbjct: 137 FSFDKVADM 145


>sp|MFNA_METAC|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina acetivorans

Query: 1 FSYDRIANI 9
FS+D++A++
Sbjct: 137 FSFDKVADM 145


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FSYDRI 6
FSYDR+
Sbjct: 204 FSYDRL 209


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SYDRIANIN 10
+Y+R NIN
Sbjct: 73 NYERFMNIN 81


>sp|Y1283_METJA|UNCHARACTERIZED protein MJ1283|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSYDRIANI 9
F YDR N+
Sbjct: 164 FVYDRFGNL 172




47|SequenceR|240|231|RYLRKFSYDR

>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 1 RYLRKFSYD 9
RY+ KF++D
Sbjct: 162 RYISKFAFD 170


>sp|HACA_METAC|PROBABLE methanogen homoaconitase large subunit|Methanosarcina acetivorans

Query: 2 YLRKFSYD 9
YL +F+YD
Sbjct: 265 YLEEFTYD 272


>sp|DPCKG_IGNH4|GTP-DEPENDENT dephospho-CoA kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 YLRKFSYD 9
+LR+F YD
Sbjct: 156 FLREFDYD 163


>sp|PIMT_METJA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RYLRKFSYD 9
R LRK YD
Sbjct: 120 RTLRKLGYD 128


>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei (strain

Query: 2 YLRKFSYD 9
YL++F YD
Sbjct: 232 YLKEFVYD 239


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RYLRKFSY 8
YL+KFSY
Sbjct: 384 NYLKKFSY 391


>sp|GLMM_PYRHO|PROBABLE phosphoglucosamine mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 RKFSYDR 10
R+FSY+R
Sbjct: 386 REFSYER 392


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 4 RKFSYDR 10
R+FSY+R
Sbjct: 386 REFSYER 392


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YLRKFSYD 9
YL+KF Y+
Sbjct: 1000 YLKKFDYN 1007


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YLRKFSYD 9
YL+KF Y+
Sbjct: 1000 YLKKFDYN 1007


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YLRKFSYD 9
YL+KF Y+
Sbjct: 1000 YLKKFDYN 1007


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YLRKFSYD 9
YL+KF Y+
Sbjct: 1000 YLKKFDYN 1007


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YLRKFSYD 9
YL+KF Y+
Sbjct: 1000 YLKKFDYN 1007


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YLRKFSYD 9
YL+KF Y+
Sbjct: 1000 YLKKFDYN 1007


>sp|IF2G_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 5 KFSYDR 10
K+SYDR
Sbjct: 278 KYSYDR 283


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 2 YLRKFSYD 9
YL+KF Y+
Sbjct: 1000 YLKKFDYN 1007


>sp|LEUD2_METKA|3-ISOPROPYLMALATE dehydratase small subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 1 RYLRKFSYD 9
R LR+ SYD
Sbjct: 23 RCLRRVSYD 31


>sp|AATC_HALLT|A-TYPE ATP synthase subunit C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RYLRKF 6
RYLRKF
Sbjct: 95 RYLRKF 100


>sp|AATC_HALVD|A-TYPE ATP synthase subunit C|Haloferax volcanii (strain ATCC 29605

Query: 1 RYLRKF 6
RYLRKF
Sbjct: 95 RYLRKF 100


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RYLRKFSYD 9
YLRKF ++
Sbjct: 198 EYLRKFGFE 206


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YLRKFSYD 9
YLRKF ++
Sbjct: 198 YLRKFGFE 205


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 YLRKFSYD 9
YLRKF ++
Sbjct: 199 YLRKFGFE 206


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 YLRKFSYD 9
YLRKF ++
Sbjct: 200 YLRKFGFE 207


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 2 YLRKFSYDR 10
Y RK Y+R
Sbjct: 523 YYRKLGYER 531


>sp|AATC_HALWD|A-TYPE ATP synthase subunit C|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RYLRKF 6
RYLRKF
Sbjct: 94 RYLRKF 99




48|SequenceR|245|236|ELVKLRYLRK

>sp|QUEE_THEAC|7-CARBOXY-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 LRYLRK 10
LRYLRK
Sbjct: 133 LRYLRK 138




49|SequenceR|250|241|PWHSIELVKL

>sp|RL18_SULAC|LARGE ribosomal subunit protein uL18|Sulfolobus acidocaldarius (strain

Query: 3 HSIELVK 9
HSIELVK
Sbjct: 63 HSIELVK 69


>sp|RL22_THEKO|LARGE ribosomal subunit protein uL22|Thermococcus kodakarensis (strain

Query: 1 PWHSIELVK 9
P HS+EL++
Sbjct: 30 PKHSVELLR 38


>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PWHSIELVKL 10
PW ++EL +L
Sbjct: 384 PWLALELPRL 393


>sp|Y1542_METKA|UPF0173 metal-dependent hydrolase MK1542|Methanopyrus kandleri (strain AV19

Query: 2 WHSIELVK 9
WHS E+V+
Sbjct: 108 WHSSEIVE 115


>sp|NDK_THEVO|NUCLEOSIDE diphosphate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 HSIELVKL 10
H+IE+V+L
Sbjct: 79 HAIEIVRL 86


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 1 PWHSIELVK 9
PW +EL++
Sbjct: 346 PWFQLELIE 354


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PWHSIEL 7
PW +EL
Sbjct: 52 PWEGVEL 58


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PWHSIEL 7
PW +EL
Sbjct: 52 PWEGVEL 58


>sp|AMTAB_ARCFU|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Archaeoglobus

Query: 2 WHSIELVK 9
W S EL+K
Sbjct: 304 WKSYELIK 311


>sp|HIS5_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 2 WHSIELVK 9
W+S+++VK
Sbjct: 116 WNSVKIVK 123


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PWHSIEL 7
PW +EL
Sbjct: 52 PWEGVEL 58


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PWHSIEL 7
PW +EL
Sbjct: 52 PWEGVEL 58


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 WHSIELVK 9
W S EL+K
Sbjct: 432 WESFELIK 439


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 WHSIELVK 9
W S EL+K
Sbjct: 432 WESFELIK 439


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 WHSIELVK 9
W S EL+K
Sbjct: 432 WESFELIK 439


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 WHSIELVK 9
W S EL+K
Sbjct: 432 WESFELIK 439


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 WHSIELVK 9
W S EL+K
Sbjct: 432 WESFELIK 439


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 WHSIELVK 9
W S EL+K
Sbjct: 432 WESFELIK 439


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 3 HSIELVKL 10
H +EL+KL
Sbjct: 364 HIVELIKL 371




50|SequenceR|255|246|MTDLYPWHSI

>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 MTDLYPWHSI 10
M D++P+HS+
Sbjct: 347 MVDVFPYHSM 356


>sp|PURQ_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MTDLYPWH 8
+TD YPW+
Sbjct: 189 VTDEYPWN 196


>sp|PURQ_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MTDLYPWH 8
+TD YPW+
Sbjct: 188 VTDEYPWN 195


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 2 TDLYPWH 8
T LYPW+
Sbjct: 56 TTLYPWY 62


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 4 LYPWHSI 10
LY WH I
Sbjct: 157 LYVWHEI 163


>sp|PURP_METS5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Metallosphaera sedula (strain ATCC

Query: 3 DLYPWHS 9
+L+PW S
Sbjct: 94 NLFPWES 100


>sp|KDPC_METPE|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Methanosphaerula palustris (strain ATCC

Query: 1 MTDLYPWH 8
+TDL P+H
Sbjct: 163 VTDLMPFH 170


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 2 TDLYPWH 8
T L+PW+
Sbjct: 53 TSLHPWY 59


>sp|PNCB_METMA|NICOTINATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 PWHS 9
PWHS
Sbjct: 111 PWHS 114


>sp|Y856_METJA|UNCHARACTERIZED protein MJ0856|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MTDLYPWHSI 10
++DL WH +
Sbjct: 138 LSDLGEWHGV 147


>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 6 PWHS 9
PWHS
Sbjct: 111 PWHS 114


>sp|T1M2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 4 LYPWHSI 10
LY WH +
Sbjct: 158 LYVWHEV 164


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MTDLYPWHSI 10
+TDL W+ +
Sbjct: 247 LTDLLEWYGV 256


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YPWHSI 10
Y WHSI
Sbjct: 133 YIWHSI 138




51|SequenceR|260|251|LCNPTMTDLY

>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 1 LCNPTMTDL 9
L NP+M DL
Sbjct: 406 LLNPSMADL 414


>sp|PTH_METBF|PEPTIDYL-TRNA hydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PTMTDLY 10
PT+ DLY
Sbjct: 57 PTLNDLY 63


>sp|EI2BL_PYRHO|PUTATIVE translation initiation factor eIF-2B|Pyrococcus horikoshii

Query: 3 NPTMTDLY 10
NP+M LY
Sbjct: 59 NPSMASLY 66


>sp|EI2BL_PYRFU|PUTATIVE translation initiation factor eIF-2B|Pyrococcus furiosus (strain

Query: 3 NPTMTDLY 10
NP+M LY
Sbjct: 59 NPSMASLY 66


>sp|EI2BL_PYRAB|PUTATIVE translation initiation factor eIF-2B|Pyrococcus abyssi (strain

Query: 3 NPTMTDLY 10
NP+M LY
Sbjct: 59 NPSMASLY 66


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 3 NPTMTDLY 10
NP +DLY
Sbjct: 95 NPLQSDLY 102


>sp|NUCS_SACS2|ENDONUCLEASE NucS|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LCNPTMTDLY 10
L NP+ T++Y
Sbjct: 5 LLNPSNTEIY 14


>sp|NUCS_SACI7|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LCNPTMTDLY 10
L NP+ T++Y
Sbjct: 5 LLNPSNTEIY 14


>sp|NUCS_SACI4|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LCNPTMTDLY 10
L NP+ T++Y
Sbjct: 5 LLNPSNTEIY 14


>sp|NUCS_SACI3|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LCNPTMTDLY 10
L NP+ T++Y
Sbjct: 5 LLNPSNTEIY 14


>sp|NUCS_SACI2|ENDONUCLEASE NucS|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LCNPTMTDLY 10
L NP+ T++Y
Sbjct: 5 LLNPSNTEIY 14


>sp|NUCS_SACI1|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LCNPTMTDLY 10
L NP+ T++Y
Sbjct: 5 LLNPSNTEIY 14


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 3 NPTMTDL 9
NPT TD+
Sbjct: 8193 NPTATDI 8199


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LCNPTMTD 8
LC T+TD
Sbjct: 359 LCEATLTD 366




52|SequenceR|265|256|LNLGYLCNPT

>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LNLGYLCNPT 10
L GY NPT
Sbjct: 316 LGFGYTANPT 325


>sp|KTHY_METVS|PROBABLE thymidylate kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LNLGYLCNPT 10
LN Y C PT
Sbjct: 26 LNAEYTCEPT 35


>sp|IF6_HALLT|TRANSLATION initiation factor 6|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 NLGYLCNP 9
N G LC+P
Sbjct: 151 NTGVLCHP 158


>sp|COXX_KORCO|PROTOHEME IX farnesyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LNLGYLCNP 9
L L YL NP
Sbjct: 103 LGLSYLINP 111


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 2 NLGYLC 7
+LGYLC
Sbjct: 353 SLGYLC 358


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 1 LNLGYLCNPT 10
L GY NP+
Sbjct: 316 LGFGYTANPS 325


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NLGYLCNPT 10
N G+L NP+
Sbjct: 79 NRGFLINPS 87


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 LNLGYLCNP 9
L +GY C P
Sbjct: 229 LRIGYACVP 237


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GYLCNPT 10
GY+ NPT
Sbjct: 1681 GYIINPT 1687


>sp|CSA1_SACS2|CRISPR-ASSOCIATED exonuclease Csa1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LNLGYLCNPT 10
++ GYLC T
Sbjct: 224 IDFGYLCYVT 233




53|SequenceR|270|261|ISLSTLNLGY

>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 ISLSTLNLG 9
I STLNLG
Sbjct: 341 IKKSTLNLG 349


>sp|Y452_PYRFU|UPF0216 protein PF0452|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ISLSTLNLGY 10
+ LSTL+ GY
Sbjct: 72 LELSTLDRGY 81




54|SequenceR|275|266|LNCHTISLST

>sp|MCR_SULTO|MALONYL-COA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LNCHTISL 8
LN HTISL
Sbjct: 126 LNPHTISL 133


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNCHTISLST 10
L CH IS+++
Sbjct: 182 LGCHVISVNS 191


>sp|CDC6A_HALSA|ORC1-TYPE DNA replication protein 10|Halobacterium salinarum (strain ATCC

Query: 1 LNCHTISLS 9
LNC T+S S
Sbjct: 93 LNCKTLSSS 101


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 3 CHTISL 8
CHT+S+
Sbjct: 516 CHTLSI 521


>sp|GMHA_THEAC|PROBABLE phosphoheptose isomerase|Thermoplasma acidophilum (strain ATCC

Query: 1 LNCHTISLS 9
+ CHTI+ +
Sbjct: 130 IGCHTIAFT 138




55|SequenceR|280|271|YPVATLNCHT

>sp|COBS_METKA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 PVATLNC 8
PVATL C
Sbjct: 188 PVATLTC 194


>sp|MFND_METJA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YPVATLNCHT 10
YPV L C +
Sbjct: 121 YPVKNLGCSS 130


>sp|MFND_METFA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus fervens (strain DSM 4213

Query: 1 YPVATLNCHT 10
YPV L C +
Sbjct: 105 YPVKNLGCSS 114


>sp|HCGF_METVS|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus vannielii

Query: 3 VATLNCHT 10
VATL C T
Sbjct: 4 VATLECFT 11


>sp|BTUCA_HALSA|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 1 YPVATLNCHT 10
Y +AT N HT
Sbjct: 173 YAIATKNGHT 182


>sp|BTUCA_HALS3|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 1 YPVATLNCHT 10
Y +AT N HT
Sbjct: 173 YAIATKNGHT 182




56|SequenceR|285|276|HRVALYPVAT

>sp|RL23_METKA|LARGE ribosomal subunit protein uL23|Methanopyrus kandleri (strain AV19

Query: 1 HRVALYPVAT 10
H V LYPVAT
Sbjct: 13 HDVLLYPVAT 22


>sp|GCK_SULTO|GLYCERATE 2-kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HRVALYPVAT 10
HR LY +AT
Sbjct: 329 HRFKLYAIAT 338


>sp|Y662_METJA|UNCHARACTERIZED protein MJ0662|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RVALYPVA 9
R+A+YP+A
Sbjct: 8 RLAIYPIA 15


>sp|PYRK_THEVO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma volcanium

Query: 3 VALYPVA 9
V+LYP+A
Sbjct: 104 VSLYPIA 110




57|SequenceR|290|281|RLYVLHRVAL

>sp|T1M2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 1 RLYVLHRVA 9
+LYV H VA
Sbjct: 157 KLYVWHEVA 165


>sp|R15PI_PYRHO|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus horikoshii (strain ATCC

Query: 3 YVLHRV 8
YV+HRV
Sbjct: 77 YVMHRV 82


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RLYVLH 6
RLY+LH
Sbjct: 654 RLYILH 659




58|SequenceR|295|286|SLNLFRLYVL

>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 SLNLFRLYV 9
S +LFRLY+
Sbjct: 668 SADLFRLYI 676


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SLNLFRLYVL 10
SLNL R YV+
Sbjct: 1400 SLNLTRSYVI 1409


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FRLYVL 10
FRLYVL
Sbjct: 609 FRLYVL 614


>sp|Y495_ARCFU|UNCHARACTERIZED protein AF_0495|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SLNLFRLYVL 10
+LN+F LY L
Sbjct: 46 TLNVFNLYSL 55


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii

Query: 1 SLNLFRLYV 9
SLNL LYV
Sbjct: 10 SLNLVDLYV 18




59|SequenceR|300|291|SIPNYSLNLF

>sp|Y545_METJA|UNCHARACTERIZED protein MJ0545|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IPNYSLN 8
IPNY+LN
Sbjct: 21 IPNYALN 27


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SIPNYSLNLF 10
+ PNY+LN++
Sbjct: 834 ATPNYNLNIY 843


Query: 1 SIPNYSLNLF 10
S+PN + NL+
Sbjct: 911 SVPNVTANLY 920


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 SIPNYSLNLF 10
++ NYSLN+
Sbjct: 211 NVKNYSLNML 220


>sp|WECBH_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase homolog|Methanococcus maripaludis (strain DSM 14266

Query: 3 PNYSLNL 9
PNY+LN+
Sbjct: 55 PNYNLNI 61


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IPNYSLNLF 10
+P YS NL+
Sbjct: 499 MPTYSSNLY 507




60|SequenceR|305|296|SGEITSIPNY

>sp|LIVF_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus

Query: 2 GEITSIP 8
GEITS+P
Sbjct: 63 GEITSLP 69


>sp|REG4_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF0864|Pyrococcus furiosus

Query: 4 ITSIPN 9
ITSIPN
Sbjct: 132 ITSIPN 137


>sp|Y1796_ARCFU|UNCHARACTERIZED protein AF_1796|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SGEITSIPN 9
SGE TS+ N
Sbjct: 86 SGETTSVVN 94


>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus torridus

Query: 2 GEITSIPNY 10
G+I+ +P+Y
Sbjct: 121 GDISKLPDY 129


>sp|RS6E_METKA|SMALL ribosomal subunit protein eS6|Methanopyrus kandleri (strain AV19

Query: 2 GEITSIPNY 10
GEI +P Y
Sbjct: 40 GEIVGLPGY 48




61|SequenceR|310|301|LEHLMSGEIT

>sp|TRPD_THEAC|ANTHRANILATE phosphoribosyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 LEHLMSG 7
LEH+MSG
Sbjct: 303 LEHIMSG 309


>sp|MDH_AERPE|MALATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LEHLMSGE 8
LEHLMS E
Sbjct: 190 LEHLMSKE 197


>sp|KDGA_SULTO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EHLMSGEIT 10
EH+ SG+++
Sbjct: 211 EHITSGQVS 219




62|SequenceR|315|306|EQLRLLEHLM

>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 EQLRLLEHL 9
+Q RLLEHL
Sbjct: 1412 KQKRLLEHL 1420


>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 1 EQLRLLEH 8
+QLRL+EH
Sbjct: 93 KQLRLVEH 100


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 QLRLLEHL 9
Q RLL+HL
Sbjct: 127 QRRLLDHL 134


>sp|METXA_HALVD|HOMOSERINE O-acetyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 2 QLRLLEHL 9
Q RLL+HL
Sbjct: 136 QRRLLDHL 143


>sp|METXA_HALPT|HOMOSERINE O-acetyltransferase|Haloferax prahovense (strain DSM 18310

Query: 2 QLRLLEHL 9
Q RLL+HL
Sbjct: 136 QRRLLDHL 143


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 QLRLLEHL 9
Q RLL+HL
Sbjct: 147 QRRLLDHL 154


>sp|METXA_HALGM|HOMOSERINE O-acetyltransferase|Haloferax gibbonsii (strain ATCC 33959

Query: 2 QLRLLEHL 9
Q RLL+HL
Sbjct: 136 QRRLLDHL 143


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EQLRLLEHLM 10
EQ+ L++H M
Sbjct: 97 EQVELIQHSM 106


>sp|RL22_STAMF|LARGE ribosomal subunit protein uL22|Staphylothermus marinus (strain ATCC

Query: 3 LRLLEHL 9
LRLLEH+
Sbjct: 95 LRLLEHV 101




63|SequenceR|320|311|GVLQIEQLRL

>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC

Query: 1 GVLQIEQLR 9
GV+QIE++R
Sbjct: 24 GVMQIEEMR 32




64|SequenceR|325|316|VALQGGVLQI

>sp|KDPC_THEAC|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VALQGGVLQI 10
+ LQG ++QI
Sbjct: 130 IPLQGAIIQI 139


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ALQGGVL 8
A+QGGVL
Sbjct: 350 AIQGGVL 356


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 2 ALQGGVL 8
A+QGGVL
Sbjct: 350 AIQGGVL 356


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ALQGGVL 8
A+QGGVL
Sbjct: 350 AIQGGVL 356


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 2 ALQGGVL 8
A+QGGVL
Sbjct: 349 AVQGGVL 355


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 2 ALQGGVL 8
A+QGGVL
Sbjct: 349 AVQGGVL 355


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 ALQGGVL 8
A+QGGVL
Sbjct: 350 AVQGGVL 356


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 LQGGVLQI 10
LQGG+L++
Sbjct: 514 LQGGLLRV 521


>sp|PDXT_IGNH4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Ignicoccus hospitalis (strain

Query: 1 VALQGGVLQ 9
+ALQGGV++
Sbjct: 6 LALQGGVVE 14


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ALQGGVL 8
A+QGGVL
Sbjct: 355 AIQGGVL 361




65|SequenceR|330|321|AYPEVVALQG

>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AYPEVVALQG 10
+YPEVV + G
Sbjct: 130 SYPEVVKMLG 139


>sp|Y967_METTH|PUTATIVE HTH-type transcriptional regulatory protein|Methanothermobacter

Query: 2 YPEVVALQG 10
YPE++A +G
Sbjct: 115 YPEIIADRG 123


>sp|TKSU_THEKO|TK-SUBTILISIN kodakarensis (strain ATCC BAA-918

Query: 1 AYPEVVAL 8
AYPEV+A+
Sbjct: 299 AYPEVIAV 306


>sp|RIBL_METJA|FAD synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YPEVVALQG 10
YPE+V +G
Sbjct: 114 YPEIVRFRG 122


>sp|RIBL_METSF|FAD synthase|Methanocaldococcus sp. (strain FS406-22)

Query: 2 YPEVVALQG 10
YPE+V +G
Sbjct: 116 YPEIVRFRG 124


>sp|Y1545_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1545|Methanocaldococcus

Query: 3 PEVVALQG 10
P VV LQG
Sbjct: 195 PRVVVLQG 202


>sp|MPTA_METBF|GTP cyclohydrolase MptA|Methanosarcina barkeri (strain Fusaro /

Query: 1 AYPEVVALQG 10
AY E VAL G
Sbjct: 301 AYAERVALMG 310


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YPEVVALQG 10
YP+VVA+ G
Sbjct: 6 YPKVVAVIG 14




66|SequenceR|335|326|NLGRFAYPEV

>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LGRFAYPEV 10
LGRFA+P+
Sbjct: 378 LGRFAFPDT 386


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LGRFAYPEV 10
LGRFA+P+
Sbjct: 378 LGRFAFPDT 386


>sp|FPOO_METMA|F(420)H(2) dehydrogenase subunit O|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LGRFAYPE 9
L RFAYPE
Sbjct: 23 LLRFAYPE 30


>sp|METK_METM6|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 LGRFAYPEV 10
+G +AYPEV
Sbjct: 67 VGGYAYPEV 75


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NLGRFAYP 8
N RFAYP
Sbjct: 947 NKARFAYP 954


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LGRFAYPEV 10
+GR+ YP+V
Sbjct: 43 VGRYGYPKV 51


>sp|NFI_PICTO|BIFUNCTIONAL methyltransferase/endonuclease|Picrophilus torridus (strain ATCC

Query: 1 NLGRFAYPEV 10
NLG+ YPE+
Sbjct: 272 NLGKDHYPEI 281


>sp|METK_METMP|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LGRFAYPEV 10
+G +AYPE+
Sbjct: 67 VGGYAYPEL 75


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 LGRFAYPEV 10
+G +AYPE+
Sbjct: 67 VGGYAYPEL 75


>sp|METK_METM5|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 LGRFAYPEV 10
+G +AYPE+
Sbjct: 67 VGGYAYPEL 75


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NLGRFAYP 8
N GR +YP
Sbjct: 619 NAGRLSYP 626


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NLGRFAYP 8
N GR +YP
Sbjct: 601 NAGRLSYP 608


>sp|Y1314_ARCFU|UNCHARACTERIZED protein AF_1314|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NLGRFAYPE 9
+L +FAYP+
Sbjct: 155 DLVKFAYPD 163


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 2 LGRFAYPEV 10
LG+F +P++
Sbjct: 64 LGQFGFPDL 72


>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 1 NLGRFAYP 8
N G FA+P
Sbjct: 268 NFGGFAFP 275


>sp|TRPB1_AERPE|TRYPTOPHAN synthase beta chain 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 NLGRFAYPEV 10
N G F YP +
Sbjct: 261 NFGGFTYPMI 270


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LGRFAYPEV 10
+GR YP+V
Sbjct: 48 VGRVGYPKV 56


>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NLGRFAYP 8
N G F YP
Sbjct: 262 NFGGFTYP 269




67|SequenceR|340|331|LVRLYNLGRF

>sp|EI2BL_PYRHO|PUTATIVE translation initiation factor eIF-2B|Pyrococcus horikoshii

Query: 1 LVRLYNLGRF 10
+ LYNL RF
Sbjct: 62 MASLYNLARF 71


>sp|EI2BL_PYRAB|PUTATIVE translation initiation factor eIF-2B|Pyrococcus abyssi (strain

Query: 1 LVRLYNLGRF 10
+ LYNL RF
Sbjct: 62 MASLYNLARF 71


>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 VRLYNLG 8
VR+YN+G
Sbjct: 3 VRVYNIG 9


>sp|Y103_METJA|UNCHARACTERIZED protein MJ0103|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVRLYNLGR 9
L R+Y LGR
Sbjct: 311 LCRVYQLGR 319


>sp|DHYS_PYRFU|PROBABLE deoxyhypusine synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LYNLGRF 10
+Y LGRF
Sbjct: 178 IYELGRF 184


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 LVRLYNLGRF 10
LVRLY L F
Sbjct: 810 LVRLYGLEPF 819


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 LVRLYNLGRF 10
+VRL LG F
Sbjct: 471 MVRLMGLGNF 480


>sp|FTSZ2_HALVD|CELL division protein FtsZ 2|Haloferax volcanii (strain ATCC 29605

Query: 3 RLYNLG 8
RLYN+G
Sbjct: 49 RLYNIG 54


>sp|FTSZ2_HALSA|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC

Query: 3 RLYNLG 8
RLYN+G
Sbjct: 48 RLYNIG 53


>sp|FTSZ2_HALS3|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC

Query: 3 RLYNLG 8
RLYN+G
Sbjct: 48 RLYNIG 53


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 LYNLGR 9
+YNLGR
Sbjct: 484 IYNLGR 489


>sp|RNZ_THEAC|RIBONUCLEASE Z|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RLYNLGRF 10
R Y+LG+F
Sbjct: 125 RTYDLGKF 132




68|SequenceR|345|336|NGSVNLVRLY

>sp|PYRI_METKA|ASPARTATE carbamoyltransferase regulatory chain|Methanopyrus kandleri

Query: 1 NGSVNLVRLY 10
N +VN+VR Y
Sbjct: 78 NATVNIVRDY 87


>sp|PDAD_THESM|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 GSVNLVRL 9
G+VNLV+L
Sbjct: 35 GNVNLVKL 42


>sp|PDAD_THEKO|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermococcus kodakarensis (strain ATCC

Query: 2 GSVNLVRL 9
G+VNLV+L
Sbjct: 35 GNVNLVKL 42


>sp|PDAD_PYRHO|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GSVNLVRL 9
G+VNLV+L
Sbjct: 35 GNVNLVKL 42


>sp|PDAD_PYRFU|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GSVNLVRL 9
G+VNLV+L
Sbjct: 35 GNVNLVKL 42


>sp|PDAD_PYRAB|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 GSVNLVRL 9
G+VNLV+L
Sbjct: 35 GNVNLVKL 42


>sp|PDAD_METJA|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GSVNLVRL 9
G+VNL+R+
Sbjct: 44 GNVNLIRI 51


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 SVNLVRLY 10
S NLVR+Y
Sbjct: 194 SKNLVRIY 201


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 1 NGSVNLVRLY 10
NG + VR+Y
Sbjct: 178 NGEIKEVRMY 187


>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 1 NGSVNLVRL 9
N +VN++RL
Sbjct: 128 NSNVNIIRL 136


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 NGSVNLVRL 9
GSVN VRL
Sbjct: 259 EGSVNEVRL 267


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 NLVRLY 10
NLVRLY
Sbjct: 297 NLVRLY 302




69|SequenceR|350|341|LTTLQNGSVN

>sp|PATS_METJA|SOLUBLE P-type ATPase-like phosphatase|Methanocaldococcus jannaschii

Query: 1 LTTLQNGSVN 10
+ TLQNG+V+
Sbjct: 225 VVTLQNGNVS 234


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 LTTLQNGSV 9
+T +QNG+V
Sbjct: 504 ITLIQNGAV 512


>sp|SLAB_SACS2|S-LAYER protein B|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LQNGSVN 10
+QNG+VN
Sbjct: 161 MQNGTVN 167




70|SequenceR|355|346|FVSEELTTLQ

>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FVSEELTTLQ 10
FVSE TTL+
Sbjct: 122 FVSETTTTLK 131


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 FVSEELTT 8
FVSEEL T
Sbjct: 136 FVSEELET 143


>sp|FLAH_METJA|ARCHAEAL flagellar ATP-binding protein FlaH|Methanocaldococcus jannaschii

Query: 1 FVSEELTTLQ 10
+VS +LTTL+
Sbjct: 60 YVSTQLTTLE 69




71|SequenceR|360|351|NGVSHFVSEE

>sp|SFSA_THEVO|SUGAR fermentation stimulation protein homolog|Thermoplasma volcanium

Query: 4 SHFVSEE 10
SHFVS+E
Sbjct: 85 SHFVSQE 91


>sp|PGP_METTP|PHOSPHOGLYCOLATE phosphatase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GVSHFVSE 9
GV HFV+E
Sbjct: 54 GVRHFVAE 61


>sp|OFOB_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Saccharolobus solfataricus (Sulfolobus

Query: 2 GVSHFVS 8
GV HFVS
Sbjct: 97 GVGHFVS 103


>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GVSHFVSE 9
G+SH V+E
Sbjct: 122 GISHVVTE 129


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GVSHFVSEE 10
GVSH + E+
Sbjct: 1007 GVSHLIDEK 1015


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GVSHFVSEE 10
G+S+F+S+E
Sbjct: 208 GMSNFISDE 216




72|SequenceR|365|356|ILTELNGVSH

>sp|RS13_HALMA|SMALL ribosomal subunit protein uS13|Haloarcula marismortui (strain

Query: 2 LTELNGVSH 10
LTELNG+ H
Sbjct: 41 LTELNGIGH 49


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILTELNGV 8
+LTEL+G+
Sbjct: 245 LLTELDGI 252


>sp|PDXT_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus solfataricus

Query: 2 LTELNGVS 9
L ELNGV+
Sbjct: 160 LAELNGVT 167


>sp|PDXT_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 LTELNGVS 9
L ELNGV+
Sbjct: 160 LAELNGVT 167


>sp|PDXT_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 LTELNGVS 9
L ELNGV+
Sbjct: 160 LAELNGVT 167


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 2 LTELNGVS 9
LTE++G+S
Sbjct: 69 LTEIDGIS 76


>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 LTELNGVS 9
L ELNGV+
Sbjct: 160 LAELNGVT 167


>sp|PDXT_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 LTELNGVS 9
L ELNGV+
Sbjct: 160 LAELNGVT 167


>sp|PDXT_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 LTELNGVS 9
L ELNGV+
Sbjct: 160 LAELNGVT 167


>sp|PDXT_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 LTELNGVS 9
L ELNGV+
Sbjct: 160 LAELNGVT 167




73|SequenceR|370|361|PNSDLILTEL

>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 3 SDLILTEL 10
+DL+LTEL
Sbjct: 398 ADLMLTEL 405


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 2 NSDLILTEL 10
N DL+ TEL
Sbjct: 144 NKDLVETEL 152




74|SequenceR|375|366|CDCALPNSDL

>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 2 DCALPNSDL 10
DCA+P ++L
Sbjct: 318 DCAIPEAEL 326


>sp|NDK_METST|NUCLEOSIDE diphosphate kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CDCALPNSDL 10
CD LP+ D+
Sbjct: 138 CDYELPDEDI 147


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 DCALPNSD 9
DCAL +SD
Sbjct: 187 DCALLDSD 194


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 2 DCALPNSD 9
DCAL +SD
Sbjct: 187 DCALLDSD 194


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 2 DCALPNSD 9
DCAL +SD
Sbjct: 187 DCALLDSD 194


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 DCALPNSD 9
DCAL +SD
Sbjct: 187 DCALLDSD 194


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 DCALPNSD 9
DCAL +SD
Sbjct: 187 DCALLDSD 194


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 DCALPNSD 9
DCAL +SD
Sbjct: 187 DCALLDSD 194


>sp|RPIA_HALMA|RIBOSE-5-PHOSPHATE isomerase A|Haloarcula marismortui (strain ATCC 43049

Query: 2 DCALPNSDL 10
DC +P +DL
Sbjct: 67 DCGIPLADL 75


>sp|RS5_METBU|SMALL ribosomal subunit protein uS5|Methanococcoides burtonii (strain DSM

Query: 1 CDCALPNS 8
C C LP++
Sbjct: 122 CGCGLPHT 129


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 3 CALPNSDL 10
C +P++DL
Sbjct: 318 CTIPSTDL 325


>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 3 CALPNSD 9
C++P+SD
Sbjct: 40 CSIPDSD 46




75|SequenceR|380|371|VWLLRCDCAL

>sp|RIBA_ARCFU|GTP cyclohydrolase-2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LRCDCA 9
LRCDC
Sbjct: 243 LRCDCG 248


>sp|RIBA_THEVO|GTP cyclohydrolase-2|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LRCDC 8
LRCDC
Sbjct: 61 LRCDC 65


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VWLLRC 6
VW LRC
Sbjct: 544 VWALRC 549


>sp|RIBA_PICTO|GTP cyclohydrolase-2|Picrophilus torridus (strain ATCC 700027

Query: 4 LRCDC 8
+RCDC
Sbjct: 61 MRCDC 65


>sp|IF2B_METB6|TRANSLATION initiation factor 2 subunit|Methanoregula boonei (strain DSM 21154

Query: 1 VWLLRCD 7
V LLRCD
Sbjct: 119 VLLLRCD 125


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain ATCC

Query: 4 LRCDCA 9
LRC+C+
Sbjct: 139 LRCECS 144


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 2 WLLRCDCA 9
+ LRC+C
Sbjct: 19 YTLRCECG 26


>sp|RS8E_PICTO|SMALL ribosomal subunit protein eS8|Picrophilus torridus (strain ATCC

Query: 3 LLRCDCA 9
LLRCD A
Sbjct: 56 LLRCDYA 62


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LLRCDCA 9
+++CDC
Sbjct: 521 IMKCDCG 527


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VWLLRCDCAL 10
+W +C+ AL
Sbjct: 213 IWCPKCETAL 222


>sp|IF2B_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 WLLRCD 7
W+L+C+
Sbjct: 121 WILKCE 126


>sp|PA84_METTH|PROTEIN MTH_1184|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LLRCDCA 9
+ RCDC
Sbjct: 4 IFRCDCG 10


>sp|NTPTH_IGNH4|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VWLLRCDC 8
WL R DC
Sbjct: 60 AWLARVDC 67


>sp|Y3503_METJA|UNCHARACTERIZED protein MJECL03|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WLLRCDCAL 10
W+++CD L
Sbjct: 14 WIIKCDLEL 22




76|SequenceR|385|376|WRRRFVWLLR

>sp|DEGLY_THEKO|DEGLYCASE TK1284|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WRRRFVWLLR 10
W R FV LLR
Sbjct: 157 WMREFVKLLR 166


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 WRRRFV 6
WRRRF+
Sbjct: 275 WRRRFL 280


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 WRRRFVW 7
W R FVW
Sbjct: 233 WDRFFVW 239


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 1 WRRRFVWLLR 10
WR VW +R
Sbjct: 205 WRSLIVWKMR 214


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 1 WRRRFVWLLR 10
+RRRFV LR
Sbjct: 168 FRRRFVETLR 177


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 RRRFVW 7
+RRF+W
Sbjct: 168 QRRFIW 173


>sp|UPPP_METST|UNDECAPRENYL-DIPHOSPHATASE stadtmanae (strain ATCC 43021

Query: 3 RRFVWLL 9
+RF WL+
Sbjct: 94 KRFAWLI 100


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 1 WRRRFVWL 8
W RF W+
Sbjct: 287 WDYRFTWI 294


>sp|T1214_ARCFU|PROBABLE transposase for insertion sequence|Archaeoglobus fulgidus (strain

Query: 2 RRRFVWLLR 10
+RRF WL+R
Sbjct: 287 KRRFGWLIR 295


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 WRRRFVWL 8
WR R WL
Sbjct: 136 WRHRPEWL 143


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 3 RRFVWLLR 10
R+FVW L+
Sbjct: 634 RKFVWKLK 641


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WRRRFVWLL 9
W R FV++L
Sbjct: 247 WPRNFVYML 255




77|SequenceR|390|381|NFNLRWRRRF

>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FNLRWRRRF 10
F+L WRR F
Sbjct: 150 FSLDWRRNF 158


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 FNLRWRRRF 10
F+L WRR F
Sbjct: 150 FSLDWRRNF 158


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 FNLRWRRRF 10
F+L WRR F
Sbjct: 150 FSLDWRRNF 158


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FNLRWRRRF 10
F+L WRR F
Sbjct: 140 FSLDWRRNF 148


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FNLRWRRRF 10
F+L WRR F
Sbjct: 147 FSLDWRRNF 155


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 FNLRWRRRF 10
+++ WRRRF
Sbjct: 151 YSIDWRRRF 159


>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 2 FNLRWRR 8
FN+RW+R
Sbjct: 307 FNIRWKR 313


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NFNLRWRR 8
NF +RWR+
Sbjct: 678 NFRVRWRK 685


>sp|MRE11_PYRHO|DNA double-strand break repair protein|Pyrococcus horikoshii (strain

Query: 2 FNLRWRRRF 10
FN++WR+ F
Sbjct: 305 FNIKWRKPF 313


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 FNLRWRRRF 10
+++ WRR+F
Sbjct: 135 YSIDWRRKF 143


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FNLRWRRRF 10
+++ WRR+F
Sbjct: 140 YSIDWRRKF 148


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FNLRWRRRF 10
F L WRR F
Sbjct: 145 FALDWRRNF 153


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FNLRWRRRF 10
+++ WRR+F
Sbjct: 140 YSIDWRRKF 148


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FNLRWRRRF 10
+++ WRR+F
Sbjct: 140 YSIDWRRKF 148


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FNLRWRRRF 10
FN+R++ RF
Sbjct: 386 FNIRYKERF 394


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 FNLRWRRRF 10
+++ WRR+F
Sbjct: 140 YSIDWRRKF 148


>sp|FEN_PYRFU|FLAP endonuclease 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NFNLRWR 7
N+NL WR
Sbjct: 287 NYNLVWR 293


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NLRWRRRF 10
NL W R+F
Sbjct: 376 NLDWERQF 383


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 NLRWRRRF 10
NL W R+F
Sbjct: 377 NLNWARQF 384


>sp|NADA_PYRAE|QUINOLINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LRWRRR 9
L WRRR
Sbjct: 94 LEWRRR 99


>sp|Y605_METJA|PUTATIVE toxin MJ0605|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NFNLRWR 7
++NLRW+
Sbjct: 93 SYNLRWK 99


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 6 WRRRF 10
WRRRF
Sbjct: 275 WRRRF 279


>sp|CAS1B_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 RWRRRF 10
RWRRR
Sbjct: 120 RWRRRL 125


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 FNLRWRRRF 10
+NL W R+F
Sbjct: 377 WNLDWDRQF 385


>sp|COBD_PYRAB|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus abyssi (strain GE5

Query: 5 RWRRR 9
RWRRR
Sbjct: 40 RWRRR 44


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 FNLRWRRRF 10
+++ WRR F
Sbjct: 133 YSIDWRREF 141


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FNLRWRRRF 10
+ + WRR+F
Sbjct: 195 YMIDWRRKF 203


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 FNLRWRRRF 10
+++ WRR F
Sbjct: 141 YSIDWRREF 149


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FNLRWRRRF 10
+++ W RRF
Sbjct: 154 YSIDWTRRF 162


>sp|CMR5_PYRFU|CRISPR system Cmr subunit Cmr5|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LRWRRRF 10
L W RRF
Sbjct: 147 LNWMRRF 153




78|SequenceR|395|386|TPQQRNFNLR

>sp|Y3016_METHJ|DNA-BINDING protein Mhun_3016|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TPQQRNFNLR 10
TP +R FN+R
Sbjct: 98 TPAKREFNIR 107


>sp|Y1482_METLZ|DNA-BINDING protein Mlab_1482|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TPQQRNFNLR 10
PQ++ FN+R
Sbjct: 98 VPQKKEFNIR 107


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 1 TPQQRNFNL 9
TP QR F +
Sbjct: 379 TPHQREFQI 387




79|SequenceR|400|391|EPTACTPQQR

>sp|RNZ_SACI6|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EPTACT 6
EP+ACT
Sbjct: 227 EPSACT 232


>sp|RNZ_SACI4|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EPTACT 6
EP+ACT
Sbjct: 227 EPSACT 232


>sp|RNZ_SACI3|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 EPTACT 6
EP+ACT
Sbjct: 227 EPSACT 232


>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PTACTPQQ 9
PT+ TPQ+
Sbjct: 67 PTSSTPQK 74


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 EPTACTPQQ 9
EP A TPQ+
Sbjct: 188 EPMAYTPQE 196


>sp|SPEE_PYRNV|POLYAMINE aminopropyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PTACTPQQ 9
PTA TP++
Sbjct: 249 PTALTPEE 256


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 EPTACTPQQ 9
EP TPQQ
Sbjct: 188 EPMTYTPQQ 196




80|SequenceR|405|396|KGQVFEPTAC

>sp|HIS1_METMA|ATP phosphoribosyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 KGQVFEPT 8
KG+++EPT
Sbjct: 9 KGRLYEPT 16


>sp|HIS1_METBF|ATP phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KGQVFEPT 8
KG+++EPT
Sbjct: 9 KGRLYEPT 16


>sp|PRIL_METBF|DNA primase large subunit PriL|Methanosarcina barkeri (strain Fusaro /

Query: 2 GQVFEPTAC 10
G V++P AC
Sbjct: 293 GNVYKPPAC 301


>sp|AROA_METAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 KGQVFEPTA 9
KG+VF P++
Sbjct: 11 KGEVFAPSS 19


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 4 VFEPTA 9
VFEPTA
Sbjct: 162 VFEPTA 167


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 4 VFEPTA 9
VFEPTA
Sbjct: 162 VFEPTA 167


>sp|PUR7_SULTO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KGQVFEP 7
+G+VFEP
Sbjct: 107 EGEVFEP 113


>sp|HIS1_METAR|ATP phosphoribosyltransferase|Methanocella arvoryzae (strain DSM

Query: 1 KGQVFEP 7
KG+V+EP
Sbjct: 9 KGRVYEP 15


>sp|Y2125_METS5|UPF0173 metal-dependent hydrolase Msed_2125|Metallosphaera sedula (strain

Query: 2 GQVFEP 7
GQVF+P
Sbjct: 150 GQVFQP 155




81|SequenceR|410|401|FDKFEKGQVF

>sp|MTMC1_METAC|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DKFEKGQVF 10
DKFE +VF
Sbjct: 53 DKFEAAEVF 61


>sp|RS3_AERPE|SMALL ribosomal subunit protein uS3|Aeropyrum pernix (strain ATCC 700893

Query: 1 FDKFEKGQVF 10
F+KF+ G+V+
Sbjct: 145 FEKFKAGKVY 154


>sp|MTMC2_METMA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DKFEKGQVF 10
DKFE ++F
Sbjct: 53 DKFEAAEIF 61


>sp|MTMC2_METAC|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DKFEKGQVF 10
DKFE ++F
Sbjct: 53 DKFEAAEIF 61


>sp|MTMC1_METMA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DKFEKGQVF 10
DKFE ++F
Sbjct: 53 DKFEAAEIF 61


>sp|MDH_METJA|L-MALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KFEKGQVF 10
KFE+ QVF
Sbjct: 137 KFERNQVF 144


>sp|MTMC1_METBA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina barkeri

Query: 2 DKFEKGQVF 10
DKFE ++F
Sbjct: 53 DKFEAAEIF 61


>sp|MTTC2_METAC|TRIMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DKFEKGQVF 10
D+FE+G +F
Sbjct: 54 DQFEQGTLF 62


>sp|COAD_METTH|PHOSPHOPANTETHEINE adenylyltransferase|Methanothermobacter thermautotrophicus

Query: 1 FDKFEKGQ 8
FD+F KG
Sbjct: 14 FDRFHKGH 21


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FDKFEKGQV 9
+KFE+G+V
Sbjct: 378 LEKFERGEV 386


>sp|PDXT_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Metallosphaera sedula (strain

Query: 1 FDKFEKGQV 9
FDK KG+V
Sbjct: 23 FDKIGKGEV 31


>sp|G3P_PYRIL|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FDKFEKGQV 9
FDKF+K +
Sbjct: 57 FDKFKKAGI 65


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 2 DKFEKGQVF 10
D+ E+GQV+
Sbjct: 57 DEMEQGQVY 65


>sp|Y600_METMP|PROBABLE minor pilin MMP0600|Methanococcus maripaludis (strain DSM 14266

Query: 3 KFEKGQV 9
KF KGQ+
Sbjct: 3 KFSKGQI 9


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 1 FDKFEKGQVF 10
++F+KG+VF
Sbjct: 65 LEEFKKGRVF 74


>sp|RL31_METLZ|LARGE ribosomal subunit protein eL31|Methanocorpusculum labreanum

Query: 3 KFEKGQV 9
KFE GQV
Sbjct: 74 KFEDGQV 80


>sp|RL31_METMJ|LARGE ribosomal subunit protein eL31|Methanoculleus marisnigri (strain

Query: 3 KFEKGQV 9
KFE GQV
Sbjct: 74 KFEDGQV 80


>sp|MTMC2_METBA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina barkeri

Query: 2 DKFEKGQVF 10
DKFE ++F
Sbjct: 53 DKFEAAEIF 61




82|SequenceR|415|406|LLVDPFDKFE

>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LVDPFDKFE 10
LVD FD+FE
Sbjct: 352 LVDEFDRFE 360


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 5 PFDKFE 10
PFDKF+
Sbjct: 357 PFDKFK 362


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 5 PFDKFE 10
PFDKF+
Sbjct: 357 PFDKFK 362


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 5 PFDKFE 10
PFDKF+
Sbjct: 357 PFDKFK 362


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 5 PFDKFE 10
PFDKF+
Sbjct: 358 PFDKFK 363


>sp|RL15E_NANEQ|LARGE ribosomal subunit protein eL15|Nanoarchaeum equitans (strain

Query: 1 LLVDPFD 7
+LVDPF+
Sbjct: 129 ILVDPFN 135


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 5 PFDKFE 10
PFDKF+
Sbjct: 360 PFDKFK 365


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 5 PFDKF 9
PFDKF
Sbjct: 359 PFDKF 363


>sp|DCDB_METPE|DCTP deaminase, dUMP-forming|Methanosphaerula palustris (strain ATCC

Query: 2 LVDPFDK 8
++DP+DK
Sbjct: 49 VIDPYDK 55


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 5 PFDKF 9
PFDKF
Sbjct: 359 PFDKF 363


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 5 PFDKFE 10
PFDKF+
Sbjct: 358 PFDKFK 363


>sp|Y2300_METMA|UPF0173 metal-dependent hydrolase MM_2300|Methanosarcina mazei (strain

Query: 1 LLVDPF 6
LL+DPF
Sbjct: 22 LLIDPF 27


>sp|DCDB_METB6|DCTP deaminase, dUMP-forming|Methanoregula boonei (strain DSM 21154

Query: 2 LVDPFDK 8
++DP+DK
Sbjct: 49 VIDPYDK 55


>sp|Y1308_METAC|UPF0173 metal-dependent hydrolase MA_1308|Methanosarcina acetivorans

Query: 1 LLVDPF 6
LL+DPF
Sbjct: 22 LLIDPF 27


>sp|Y3514_METJA|UNCHARACTERIZED protein MJECL14|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLVDPFDK 8
LLVD FDK
Sbjct: 161 LLVDDFDK 168


>sp|TR112_HALVD|METHYLTRANSFERASE activator Trm112|Haloferax volcanii (strain ATCC 29605

Query: 1 LLVDPFDKFE 10
+L DP DK E
Sbjct: 8 ILCDPLDKSE 17


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 VDPFDKFE 10
VD FD+FE
Sbjct: 352 VDEFDRFE 359


>sp|Y3716_METBF|UPF0173 metal-dependent hydrolase Mbar_A3716|Methanosarcina barkeri

Query: 1 LLVDPF 6
LL+DPF
Sbjct: 22 LLIDPF 27


>sp|Y2513_HALS3|UPF0173 metal-dependent hydrolase OE_2513F|Halobacterium salinarum

Query: 1 LLVDPF 6
LLVDPF
Sbjct: 20 LLVDPF 25


>sp|Y1038_HALSA|UPF0173 metal-dependent hydrolase VNG_1038C|Halobacterium salinarum

Query: 1 LLVDPF 6
LLVDPF
Sbjct: 20 LLVDPF 25


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 5 PFDKF 9
PFDKF
Sbjct: 359 PFDKF 363


>sp|EF1A_NANEQ|ELONGATION factor 1-alpha|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LLVDPFDK 8
++++PFDK
Sbjct: 393 VVIEPFDK 400


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VDPFDK 8
VDPFD+
Sbjct: 769 VDPFDE 774


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 1 LLVDPFDK 8
LLVD FDK
Sbjct: 212 LLVDDFDK 219


>sp|GLPB_HALSA|PROBABLE anaerobic glycerol-3-phosphate dehydrogenase

Query: 2 LVDPFD 7
+VDPFD
Sbjct: 60 VVDPFD 65


>sp|GLPB_HALS3|PROBABLE anaerobic glycerol-3-phosphate dehydrogenase

Query: 2 LVDPFD 7
+VDPFD
Sbjct: 60 VVDPFD 65


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 1 LLVDPFDK 8
LLVD FDK
Sbjct: 224 LLVDDFDK 231


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LLVDPFDKF 9
LL+D + KF
Sbjct: 864 LLIDAYSKF 872


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 1 LLVDPFDK 8
LLVD FDK
Sbjct: 203 LLVDDFDK 210


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LVDPFDKFE 10
LVD FD+ E
Sbjct: 353 LVDEFDRME 361


>sp|Y2132_NATPD|UPF0173 metal-dependent hydrolase NP_2132A|Natronomonas pharaonis (strain

Query: 1 LLVDPF 6
LL+DPF
Sbjct: 20 LLIDPF 25


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LLVDPFDK 8
+L+DP DK
Sbjct: 223 ILIDPVDK 230




83|SequenceR|420|411|TFYNPLLVDP

>sp|AROB_THEAC|3-DEHYDROQUINATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TFYNPLLV 8
TFYNP L+
Sbjct: 155 TFYNPYLI 162


>sp|AROB_THEVO|3-DEHYDROQUINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TFYNPLLV 8
TFYNP +V
Sbjct: 155 TFYNPYMV 162


>sp|RL15E_METTH|LARGE ribosomal subunit protein eL15|Methanothermobacter

Query: 2 FYNPLLVDP 10
FY +LVDP
Sbjct: 126 FYEVILVDP 134


>sp|AROB_PICTO|3-DEHYDROQUINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 TFYNPLL 7
TFYNP L
Sbjct: 143 TFYNPKL 149


>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 TFYNPLLVDP 10
T Y+PL ++P
Sbjct: 46 TLYDPLRINP 55


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FYNPLLVDP 10
F NP+L+ P
Sbjct: 70 FMNPILLKP 78


>sp|AROB_AERPE|3-DEHYDROQUINATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TFYNP--LLVDP 10
TF+NP +LV+P
Sbjct: 156 TFHNPRMVLVEP 167


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 2 FYNPLL 7
FYNPL+
Sbjct: 27 FYNPLM 32


>sp|RS24_AERPE|SMALL ribosomal subunit protein eS24|Aeropyrum pernix (strain ATCC

Query: 2 FYNPLL 7
FYNPL+
Sbjct: 26 FYNPLV 31


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 FYNPLL 7
FYNP++
Sbjct: 67 FYNPMM 72


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 FYNPLL 7
FYNP++
Sbjct: 67 FYNPMM 72


>sp|TRM10_SULAC|TRNA (adenine(9)-N1)-methyltransferase|Sulfolobus acidocaldarius (strain

Query: 4 NPLLVDP 10
NP+++DP
Sbjct: 154 NPVILDP 160


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 NPLLVD 9
NPLL+D
Sbjct: 68 NPLLID 73


>sp|TRM1_METM6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 2 FYNPLL 7
FYNP++
Sbjct: 26 FYNPMM 31


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 2 FYNPLLV 8
FYNP +V
Sbjct: 35 FYNPRMV 41


>sp|TRPA_PYRFU|TRYPTOPHAN synthase alpha chain|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TFYNPL 6
T+YNP+
Sbjct: 87 TYYNPI 92


>sp|TRM1_META3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus aeolicus

Query: 2 FYNPLL 7
FYNP++
Sbjct: 26 FYNPIM 31


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TFYNPLLVD 9
T Y+PLL++
Sbjct: 131 TTYHPLLIN 139


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 TFYNPLLV 8
+F++PLLV
Sbjct: 255 SFFSPLLV 262


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 3 YNPLLVD 9
Y PLLVD
Sbjct: 199 YYPLLVD 205


>sp|TRPA_METVO|TRYPTOPHAN synthase alpha chain|Methanococcus voltae

Query: 1 TFYNPL 6
T+YNP+
Sbjct: 106 TYYNPI 111


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 3 YNPLLVD 9
Y PLLVD
Sbjct: 198 YYPLLVD 204


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YNPLLVD 9
Y PLLVD
Sbjct: 198 YYPLLVD 204


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 2 FYNPLLV 8
FY P+LV
Sbjct: 85 FYEPILV 91


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FYNPLLVD 9
F NP+++D
Sbjct: 670 FRNPIIID 677


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YNPLLVD 9
Y PLLVD
Sbjct: 198 YYPLLVD 204


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 3 YNPLLVD 9
Y PLLVD
Sbjct: 198 YYPLLVD 204




84|SequenceR|425|416|RARRCTFYNP

>sp|DPCKG_METMJ|GTP-DEPENDENT dephospho-CoA kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RARRCTFYNP 10
RARR T NP
Sbjct: 74 RARRLTVKNP 83


>sp|RS7_AERPE|SMALL ribosomal subunit protein uS7|Aeropyrum pernix (strain ATCC 700893

Query: 2 ARRCTFYNP 10
AR+C F NP
Sbjct: 159 ARQCAFNNP 167


>sp|RS7_PYRIL|SMALL ribosomal subunit protein uS7|Pyrobaculum islandicum (strain DSM

Query: 2 ARRCTFYNP 10
AR C+F NP
Sbjct: 178 ARTCSFNNP 186


>sp|RS7_CALMQ|SMALL ribosomal subunit protein uS7|Caldivirga maquilingensis (strain

Query: 2 ARRCTFYNP 10
AR C+F NP
Sbjct: 178 ARACSFNNP 186


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 5 CTFYNP 10
CT+Y+P
Sbjct: 57 CTYYDP 62


>sp|RS7_PYRNV|SMALL ribosomal subunit protein uS7|Pyrobaculum neutrophilum (strain DSM

Query: 2 ARRCTFYNP 10
AR C+F NP
Sbjct: 178 ARACSFNNP 186


>sp|RS7_PYRAE|SMALL ribosomal subunit protein uS7|Pyrobaculum aerophilum (strain ATCC

Query: 2 ARRCTFYNP 10
AR C+F NP
Sbjct: 177 ARACSFNNP 185


>sp|DNLI_META3|DNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ARRCTFYN 9
A+RC YN
Sbjct: 209 AQRCDIYN 216


>sp|Y737_METJA|UNCHARACTERIZED protein MJ0737|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ARRCTFYN 9
+CTFY+
Sbjct: 26 GEKCTFYD 33




85|SequenceR|430|421|KRDRIRARRC

>sp|COBS_PYRIL|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RDRIRARR 9
RDR RARR
Sbjct: 80 RDRERARR 87




86|SequenceR|435|426|FVQQAKRDRI

***** No hits found ******


87|SequenceR|440|431|HGEDVFVQQA

>sp|RL18_THEVO|LARGE ribosomal subunit protein uL18|Thermoplasma volcanium (strain ATCC

Query: 1 HGEDVF 6
HGEDVF
Sbjct: 124 HGEDVF 129


>sp|RL18_THEAC|LARGE ribosomal subunit protein uL18|Thermoplasma acidophilum (strain

Query: 1 HGEDVF 6
HGEDVF
Sbjct: 127 HGEDVF 132


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GEDVFVQ 8
GEDVFV+
Sbjct: 170 GEDVFVE 176


>sp|G3P_ARCFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GEDVFVQQA 10
G D+FV QA
Sbjct: 291 GNDLFVTQA 299


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii (strain

Query: 1 HGEDVFVQ 8
HG DV+V+
Sbjct: 263 HGADVYVR 270


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 1 HGEDVFV 7
HGEDV+
Sbjct: 356 HGEDVYA 362


>sp|RIBL_HALMD|FAD synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 HGEDVFV 7
H ED+FV
Sbjct: 73 HAEDIFV 79


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 1 HGEDVFV 7
HGEDV+
Sbjct: 422 HGEDVYA 428


>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain ATCC

Query: 1 HGEDVFV 7
HGEDV+
Sbjct: 494 HGEDVYA 500


>sp|RIBL_HALLT|FAD synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HGEDVFV 7
H EDVFV
Sbjct: 71 HPEDVFV 77


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain ATCC

Query: 1 HGEDVFV 7
HGEDV+
Sbjct: 317 HGEDVYA 323




88|SequenceR|445|436|VFQVTHGEDV

>sp|RL18_THEAC|LARGE ribosomal subunit protein uL18|Thermoplasma acidophilum (strain

Query: 3 QVTHGEDV 10
+V HGEDV
Sbjct: 124 EVPHGEDV 131


>sp|RL18_THEVO|LARGE ribosomal subunit protein uL18|Thermoplasma volcanium (strain ATCC

Query: 4 VTHGEDV 10
+ HGEDV
Sbjct: 122 IPHGEDV 128


>sp|RS10_AERPE|SMALL ribosomal subunit protein uS10|Aeropyrum pernix (strain ATCC

Query: 1 VFQVTHGE 8
VF++ HGE
Sbjct: 50 VFRLPHGE 57


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 4 VTHGEDV 10
VTH EDV
Sbjct: 890 VTHHEDV 896


>sp|CBIT_HALSA|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 FQVTHGEDV 10
FQV+HG ++
Sbjct: 152 FQVSHGYEL 160


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 THGEDV 10
THGED+
Sbjct: 190 THGEDI 195


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FQVTHGEDV 10
F T+GED+
Sbjct: 199 FNGTYGEDI 207


>sp|RL18_PYRCJ|LARGE ribosomal subunit protein uL18|Pyrobaculum calidifontis (strain DSM

Query: 3 QVTHGEDV 10
+V HGE+V
Sbjct: 129 EVPHGEEV 136


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FQVTHGED 9
+ VT+GED
Sbjct: 637 YAVTYGED 644


>sp|Y065_METJA|UNCHARACTERIZED protein MJ0065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFQVTHGEDV 10
VF+ HG DV
Sbjct: 159 VFRKVHGVDV 168


>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 1 VFQVTHGEDV 10
V VTHG D+
Sbjct: 260 VAAVTHGADL 269


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 VTHGED 9
+THG+D
Sbjct: 276 ITHGDD 281


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 1 VFQVTHGEDV 10
V VTHG D+
Sbjct: 260 VAAVTHGADL 269


>sp|Y215_METTH|UNCHARACTERIZED protein MTH_215|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VFQVTHGEDV 10
V THG D+
Sbjct: 192 VINETHGRDI 201


>sp|SYP_PYRNV|PROLINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 VTHGED 9
+THG+D
Sbjct: 275 ITHGDD 280


>sp|TRUB_THEON|PROBABLE tRNA pseudouridine synthase B|Thermococcus onnurineus (strain NA1)

Query: 1 VFQVTHGEDV 10
V VTHG D+
Sbjct: 260 VAAVTHGADL 269


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 FQVTHGEDV 10
+ THG DV
Sbjct: 444 YAATHGADV 452


>sp|SYP_PYRIL|PROLINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 VTHGED 9
+THG+D
Sbjct: 276 ITHGDD 281




89|SequenceR|450|441|GDARCVFQVT

>sp|Y1460_METJA|UNCHARACTERIZED protein MJ1460|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDARCVFQV 9
G +CVF+V
Sbjct: 146 GKDKCVFEV 154


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 GDARCVFQVT 10
G+A C+F T
Sbjct: 621 GNAVCIFNFT 630


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GDARCV 6
GDA+C+
Sbjct: 225 GDAKCI 230




90|SequenceR|455|446|APPPDGDARC

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PPPDGDAR 9
PPPD +AR
Sbjct: 634 PPPDKEAR 641


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 2 PPPDG 6
PPPDG
Sbjct: 646 PPPDG 650


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 APPPDGDAR 9
APPPD + R
Sbjct: 524 APPPDREGR 532


>sp|RL18_METAC|LARGE ribosomal subunit protein uL18|Methanosarcina acetivorans (strain

Query: 1 APPPDGD 7
AP PDGD
Sbjct: 50 APTPDGD 56


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 5 DGDARC 10
DGDA+C
Sbjct: 224 DGDAKC 229


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PPPDGDAR 9
PPPD AR
Sbjct: 654 PPPDKTAR 661


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPPDGDAR 9
PPPD AR
Sbjct: 622 PPPDKKAR 629


>sp|RS2_SACS2|SMALL ribosomal subunit protein uS2|Saccharolobus solfataricus (strain

Query: 3 PPDGD 7
PPDGD
Sbjct: 213 PPDGD 217


>sp|RL18_METMA|LARGE ribosomal subunit protein uL18|Methanosarcina mazei (strain ATCC

Query: 1 APPPDGD 7
AP P+GD
Sbjct: 50 APTPEGD 56


>sp|RL18_METBF|LARGE ribosomal subunit protein uL18|Methanosarcina barkeri (strain

Query: 1 APPPDGD 7
AP P+GD
Sbjct: 50 APTPEGD 56


>sp|TFE_NATPD|TRANSCRIPTION factor E|Natronomonas pharaonis (strain ATCC 35678

Query: 1 APPPDGD 7
A PPDG+
Sbjct: 29 AAPPDGE 35


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 1 APPPDGD 7
A PPDG+
Sbjct: 29 AAPPDGE 35


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 PPPDGD 7
P PDGD
Sbjct: 87 PAPDGD 92


>sp|TFE_HALWD|TRANSCRIPTION factor E|Haloquadratum walsbyi (strain DSM 16790

Query: 1 APPPDGD 7
A PPDG+
Sbjct: 29 AAPPDGE 35


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 1 APPPDGD 7
A PPDG+
Sbjct: 29 AAPPDGE 35


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PPDGDARC 10
PPD RC
Sbjct: 512 PPDQAVRC 519


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 4 PDGDAR 9
PDG+AR
Sbjct: 41 PDGEAR 46


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 PDGDARC 10
PDGD+R
Sbjct: 304 PDGDSRV 310


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 APPPDGD 7
APP DG+
Sbjct: 317 APPGDGE 323


>sp|POK_METHJ|PANTOATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PPPDGD 7
P PDGD
Sbjct: 159 PGPDGD 164


>sp|RS2_STAMF|SMALL ribosomal subunit protein uS2|Staphylothermus marinus (strain ATCC

Query: 3 PPDGD 7
PPDGD
Sbjct: 202 PPDGD 206




91|SequenceR|460|451|SLWLIAPPPD

>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM

Query: 5 IAPPPD 10
+APPPD
Sbjct: 66 LAPPPD 71


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC

Query: 5 IAPPPD 10
+APPPD
Sbjct: 66 LAPPPD 71


Query: 3 WLIAPPP 9
WL+ P P
Sbjct: 151 WLVVPQP 157


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 5 IAPPPD 10
+APPPD
Sbjct: 68 LAPPPD 73


Query: 3 WLIAPPP 9
WL+ P P
Sbjct: 153 WLVVPQP 159


>sp|Y2132_ARCFU|UNCHARACTERIZED protein AF_2132|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LWLIAPPPD 10
WL+A PP+
Sbjct: 22 FWLLAVPPE 30


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 2 LWLIAPP 8
LW I PP
Sbjct: 105 LWAIVPP 111


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 LWLIAPP 8
LW I PP
Sbjct: 105 LWAIVPP 111


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 LWLIAPP 8
LW I PP
Sbjct: 105 LWAIVPP 111


>sp|RL18_METAC|LARGE ribosomal subunit protein uL18|Methanosarcina acetivorans (strain

Query: 4 LIAPPPD 10
LIAP PD
Sbjct: 48 LIAPTPD 54


>sp|Y011_METJA|UNCHARACTERIZED protein MJ0011|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LIAPPPD 10
++APPP+
Sbjct: 53 VVAPPPE 59


>sp|LEUC_SULAC|3-ISOPROPYLMALATE dehydratase large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 5 IAPPPD 10
+APPPD
Sbjct: 66 LAPPPD 71


>sp|KCY_METS3|CYTIDYLATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LWLIAP 7
LWL+AP
Sbjct: 94 LWLMAP 99


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 LWLIAPP 8
LW I PP
Sbjct: 108 LWAIIPP 114


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LWLIAPP 8
LW I PP
Sbjct: 108 LWAIIPP 114


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LIAPPP 9
L+APPP
Sbjct: 33 LLAPPP 38


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 3 WLIAPPP 9
WL+ P P
Sbjct: 150 WLVVPTP 156


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 WLIAPPP 9
WL+ P P
Sbjct: 150 WLVVPAP 156


>sp|BACS2_NATPH|SENSORY rhodopsin-2|Natronomonas pharaonis (Natronobacterium pharaonis)

Query: 2 LWLIAPP 8
+WL+ PP
Sbjct: 177 IWLLGPP 183


>sp|BRP_HALSA|PROBABLE beta-carotene 15,15'-dioxygenase Brp|Halobacterium salinarum

Query: 2 LWLIAPPP 9
LWL++P P
Sbjct: 310 LWLLSPQP 317


>sp|BRP_HALS3|PROBABLE beta-carotene 15,15'-dioxygenase Brp|Halobacterium salinarum

Query: 2 LWLIAPPP 9
LWL++P P
Sbjct: 310 LWLLSPQP 317




92|SequenceR|465|456|LHKRPSLWLI

>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 4 RPSLWLI 10
RPSLW+I
Sbjct: 401 RPSLWII 407


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 LHKRPSLW 8
L KRP LW
Sbjct: 359 LSKRPLLW 366


>sp|HYD2B_PYRFU|SULFHYDROGENASE 2 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LHKRPSLWLI 10
LH+ P WL+
Sbjct: 151 LHELPDGWLV 160


>sp|UVRC_METMP|UVRABC system protein C|Methanococcus maripaludis (strain DSM 14266

Query: 1 LHKRPSL 7
+HKRP L
Sbjct: 149 MHKRPCL 155


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HKRPSLW 8
+++PSLW
Sbjct: 339 YQQPSLW 345


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 HKRPSLW 8
+++PSLW
Sbjct: 339 YQQPSLW 345


>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 1 LHKRPSLWL 9
L RP WL
Sbjct: 90 LEARPDFWL 98


>sp|MPTA_THEKO|GTP cyclohydrolase MptA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HKRPSLWL 9
HKR +W+
Sbjct: 101 HKRAEVWI 108


>sp|MPTA_PYRFU|GTP cyclohydrolase MptA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HKRPSLWL 9
HKR +W+
Sbjct: 101 HKRAEVWI 108


>sp|AMZA_AERPE|ARCHAEMETZINCIN pernix (strain ATCC 700893

Query: 5 PSLWL 9
PSLWL
Sbjct: 33 PSLWL 37


>sp|RTCA_KORCO|RNA 3'-terminal phosphate cyclase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LHKRPSLWLI 10
LH ++WL+
Sbjct: 310 LHAESNIWLV 319


>sp|MPTA_PYRHO|GTP cyclohydrolase MptA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HKRPSLWL 9
HKR +W+
Sbjct: 104 HKRAEVWI 111


>sp|MPTA_PYRAB|GTP cyclohydrolase MptA|Pyrococcus abyssi (strain GE5 /

Query: 2 HKRPSLWL 9
HKR +W+
Sbjct: 101 HKRAEVWI 108


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LHKRPSLWL 9
L K PS+WL
Sbjct: 220 LGKYPSVWL 228


>sp|Y1419_METJA|UPF0147 protein MJ1419|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LHKRPSLWLI 10
LH R +W I
Sbjct: 76 LHTRTQIWSI 85




93|SequenceR|470|461|SKASVLHKRP

>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 3 ASVLHKRP 10
A VLH+RP
Sbjct: 316 AVVLHRRP 323


>sp|HCGB_METMP|PYRIDINOL guanylyltransferase HcgB|Methanococcus maripaludis (strain DSM

Query: 1 SKASVLHKRP 10
S +S++HK P
Sbjct: 128 SPSSIIHKNP 137




94|SequenceR|475|466|TLRGNSKASV

>sp|Y1321_PYRHO|UPF0252 protein PH1321|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TLRGNS 6
TLRGNS
Sbjct: 169 TLRGNS 174




95|SequenceR|480|471|GDPFVTLRGN

>sp|RPIA_THEAC|RIBOSE-5-PHOSPHATE isomerase A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GDPFVTLRGN 10
G+PFVT GN
Sbjct: 166 GEPFVTDNGN 175


>sp|SUMT_METJA|UROPORPHYRINOGEN-III C-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GDPFVTLRG 9
GDPFV RG
Sbjct: 89 GDPFVFGRG 97


>sp|PURO_METMP|IMP cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GDPFVTLR 8
G+PFVT R
Sbjct: 15 GNPFVTYR 22


>sp|PURO_METM7|IMP cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 GDPFVTLR 8
G+PFVT R
Sbjct: 15 GNPFVTYR 22


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 1 GDPFVTLRGN 10
GD FVT GN
Sbjct: 275 GDVFVTTTGN 284


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 1 GDPFVTLRGN 10
GD FVT GN
Sbjct: 275 GDVFVTTTGN 284


>sp|SUMT_METIV|UROPORPHYRINOGEN-III C-methyltransferase|Methanobacterium ivanovii

Query: 1 GDPFVTLRG 9
GDPFV RG
Sbjct: 86 GDPFVFGRG 94


>sp|SAHH_SULAC|ADENOSYLHOMOCYSTEINASE acidocaldarius (strain ATCC 33909

Query: 1 GDPFVTLRGN 10
GD FVT GN
Sbjct: 260 GDIFVTATGN 269


>sp|SAHH_SACS2|ADENOSYLHOMOCYSTEINASE solfataricus (strain ATCC 35092

Query: 1 GDPFVTLRGN 10
GD FVT GN
Sbjct: 262 GDIFVTATGN 271


>sp|SAHH_PYRFU|ADENOSYLHOMOCYSTEINASE furiosus (strain ATCC 43587

Query: 1 GDPFVTLRGN 10
GD FVT GN
Sbjct: 266 GDIFVTATGN 275


>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 1 GDPFVTLRGN 10
GD FVT GN
Sbjct: 267 GDIFVTATGN 276


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DPFVTLRG 9
DPF LRG
Sbjct: 232 DPFEALRG 239


>sp|SIHH_METMA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GDPFVTLRGN 10
GD FVT GN
Sbjct: 259 GDLFVTATGN 268


>sp|PURO_METVS|IMP cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GDPFVTLR 8
G PFVT R
Sbjct: 15 GKPFVTYR 22


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DPFVTLR 8
DPF TLR
Sbjct: 232 DPFETLR 238


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 DPFVTLR 8
DPF TLR
Sbjct: 231 DPFETLR 237


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DPFVTLR 8
DPF TLR
Sbjct: 231 DPFETLR 237


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DPFVTLR 8
DPF TLR
Sbjct: 231 DPFETLR 237


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DPFVTLR 8
DPF TLR
Sbjct: 231 DPFETLR 237


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 DPFVTLR 8
DPF TLR
Sbjct: 231 DPFETLR 237


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DPFVTLR 8
DPF TLR
Sbjct: 231 DPFETLR 237


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DPFVTLR 8
DPF TLR
Sbjct: 231 DPFETLR 237


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 1 GDPFVTLRGN 10
GD F+T GN
Sbjct: 264 GDVFITATGN 273


>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 GDPFVTLRGN 10
GD F+T GN
Sbjct: 268 GDIFITATGN 277


>sp|SAHH_ARCFU|ADENOSYLHOMOCYSTEINASE fulgidus (strain ATCC 49558

Query: 1 GDPFVTLRGN 10
GD F+T GN
Sbjct: 251 GDIFITATGN 260


>sp|SAHH_PYRAE|ADENOSYLHOMOCYSTEINASE aerophilum (strain ATCC 51768

Query: 1 GDPFVTLRGN 10
GD F+T GN
Sbjct: 284 GDIFITATGN 293


>sp|IF2P_THEVO|PROBABLE translation initiation factor IF-2|Thermoplasma volcanium (strain

Query: 1 GDPFVTLRGN 10
G P + ++GN
Sbjct: 323 GSPLIVVKGN 332


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 1 GDPFVTLR 8
G+PF T+R
Sbjct: 83 GNPFETIR 90


>sp|SUMT_METBF|S-ADENOSYL-L-METHIONINE-DEPENDENT uroporphyrinogen III methyltransferase|Methanosarcina barkeri

Query: 1 GDPFVTLRG 9
GDP+V RG
Sbjct: 92 GDPYVFGRG 100


>sp|Y1321_PYRHO|UPF0252 protein PH1321|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 VTLRGN 10
VTLRGN
Sbjct: 168 VTLRGN 173


>sp|SAHH_HALSA|ADENOSYLHOMOCYSTEINASE salinarum (strain ATCC 700922

Query: 1 GDPFVTLRGN 10
GD F+T GN
Sbjct: 270 GDVFLTTTGN 279


>sp|SAHH_HALS3|ADENOSYLHOMOCYSTEINASE salinarum (strain ATCC 29341

Query: 1 GDPFVTLRGN 10
GD F+T GN
Sbjct: 270 GDVFLTTTGN 279


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 2 DPFVTL 7
DPFVT+
Sbjct: 326 DPFVTM 331


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GDPFVTLRGN 10
G+ FVT GN
Sbjct: 259 GEIFVTTTGN 268


>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PFVTLRGN 10
PF T+RG+
Sbjct: 31 PFYTVRGS 38




96|SequenceR|485|476|RVELTGDPFV

>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 1 RVELTGDPFV 10
R+EL G PF+
Sbjct: 287 RIELEGKPFL 296


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 3 ELTGDPFV 10
ELTG PF+
Sbjct: 164 ELTGKPFL 171


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 3 ELTGDPFV 10
ELTG PF+
Sbjct: 164 ELTGKPFL 171


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 1 RVELTGDP 8
R+E+TG+P
Sbjct: 166 RIEVTGEP 173


>sp|NADM_CALMQ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RVELTGDPFV 10
+V TG+PFV
Sbjct: 97 QVAYTGNPFV 106


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LTGDPFV 10
LTG PFV
Sbjct: 265 LTGHPFV 271


>sp|AROK_PYRAB|SHIKIMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 ELTGDPF 9
E+TG+PF
Sbjct: 69 EVTGEPF 75


>sp|RS3A_METJA|SMALL ribosomal subunit protein eS1|Methanocaldococcus jannaschii

Query: 3 ELTGDP 8
+LTGDP
Sbjct: 61 DLTGDP 66


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 VELTGDP 8
+ LTGDP
Sbjct: 185 IHLTGDP 191


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 VELTGDP 8
VE+ GDP
Sbjct: 216 VEINGDP 222


>sp|Y194_PYRAB|UPF0146 protein PYRAB01940|Pyrococcus abyssi (strain GE5 /

Query: 2 VELTGDP 8
V LTGDP
Sbjct: 105 VPLTGDP 111


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 4 LTGDPFV 10
L+G+PFV
Sbjct: 416 LSGEPFV 422


>sp|Y2394_METBU|MEMO1 family protein Mbur_2394|Methanococcoides burtonii (strain DSM 6242

Query: 3 ELTGDPFV 10
++TGDP V
Sbjct: 248 DVTGDPMV 255


>sp|Y1545_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1545|Methanocaldococcus

Query: 2 VELTGDPF 9
+E+TGD F
Sbjct: 154 LEMTGDDF 161


>sp|RIFK_HALMA|RIBOFLAVIN kinase|Haloarcula marismortui (strain ATCC 43049

Query: 2 VELTGD 7
VELTGD
Sbjct: 160 VELTGD 165


>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RVELTGDP 8
R+E+T DP
Sbjct: 110 RIEVTRDP 117




97|SequenceR|490|481|QVQAYRVELT

>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QVQAYRVEL 9
Q+ AYR+EL
Sbjct: 149 QMNAYRMEL 157


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QVQAYRVEL 9
Q+ AYR+EL
Sbjct: 149 QMNAYRMEL 157


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 3 QAYRVELT 10
+ YRVE+T
Sbjct: 157 ETYRVEIT 164


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 QVQAYRVEL 9
+++AY +EL
Sbjct: 361 EIEAYEIEL 369


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QVQAYRVEL 9
+++AY +EL
Sbjct: 361 EIEAYEIEL 369




98|SequenceR|495|486|YTGNDQVQAY

>sp|GPMA_METPE|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 3 GNDQVQAY 10
G DQVQA+
Sbjct: 106 GKDQVQAW 113


>sp|Y896_ARCFU|UNCHARACTERIZED protein AF_0896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YTGNDQVQAY 10
Y G+D +Q Y
Sbjct: 175 YRGDDAIQIY 184


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 YTGNDQVQA 9
Y GND+V+
Sbjct: 476 YFGNDEVKG 484


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 1 YTGNDQV 7
+TGND++
Sbjct: 166 FTGNDEI 172


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 YTGNDQV 7
+TGND++
Sbjct: 166 FTGNDEI 172




99|SequenceR|500|491|AAICLYTGND

>sp|IF5A_HYPBU|TRANSLATION initiation factor 5A|Hyperthermus butylicus (strain DSM 5456

Query: 2 AICLYTGN 9
A+CL++GN
Sbjct: 46 AVCLFSGN 53


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 CLYTGN 9
C+YTGN
Sbjct: 477 CIYTGN 482


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 4 CLYTGND 10
C+Y GND
Sbjct: 474 CIYFGND 480


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 2 AICLYTGND 10
A+ LYTGN+
Sbjct: 414 ALKLYTGNE 422


>sp|MIG_AERPE|THYMINE-DNA glycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 3 ICLYTGND 10
IC+Y ND
Sbjct: 216 ICIYYNND 223


>sp|HEM1_METHJ|GLUTAMYL-TRNA reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AICLYTGND 10
+CLYT +D
Sbjct: 290 GVCLYTIDD 298


>sp|PURP_METMP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain DSM

Query: 4 CLYTG 8
CLYTG
Sbjct: 330 CLYTG 334


>sp|PURP_METM7|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C7 /

Query: 4 CLYTG 8
CLYTG
Sbjct: 330 CLYTG 334


>sp|PURP_METM6|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C6 /

Query: 4 CLYTG 8
CLYTG
Sbjct: 330 CLYTG 334


>sp|PURP_METM5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C5 /

Query: 4 CLYTG 8
CLYTG
Sbjct: 330 CLYTG 334


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 ICLYTGND 10
+CL TG+D
Sbjct: 370 MCLKTGDD 377


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 2 AICLYTGN 9
++C+ TGN
Sbjct: 416 SVCMATGN 423


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ICLYTGN 9
+C+Y GN
Sbjct: 541 MCIYEGN 547


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 3 ICLYTG 8
IC YTG
Sbjct: 219 ICCYTG 224


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 3 ICLYTG 8
IC YTG
Sbjct: 220 ICCYTG 225


>sp|CPGS_METST|CYCLIC 2,3-diphosphoglycerate synthetase|Methanosphaera stadtmanae (strain

Query: 4 CLYTGND 10
C+Y G+D
Sbjct: 116 CMYKGSD 122


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 AAICLYTGN 9
AA+ +Y GN
Sbjct: 261 AAVAIYGGN 269




100|SequenceR|505|496|NGGANAAICL

>sp|QUEC_META3|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NGGANAAICL 10
+GG ++A+C+
Sbjct: 8 SGGLDSAVCM 17


>sp|GCK_SULTO|GLYCERATE 2-kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GGANAAICL 10
GG N +CL
Sbjct: 309 GGRNGEVCL 317


>sp|AROE_METM7|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 1 NGGANAAICL 10
+GGA+ A+C
Sbjct: 131 SGGASRAVCF 140


>sp|HPRL1_HALMA|HGPRTASE-LIKE protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 GGANAAIC 9
GG AAIC
Sbjct: 126 GGTMAAIC 133


>sp|RLME_METBU|RIBOSOMAL RNA large subunit methyltransferase|Methanococcoides burtonii

Query: 2 GGANAAIC 9
GGA+ IC
Sbjct: 101 GGADVVIC 108


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NGGANAAICL 10
NGG A +C+
Sbjct: 134 NGGKVADVCM 143


>sp|HPRL2_HALWD|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GGANAAIC 9
GG AAIC
Sbjct: 126 GGTLAAIC 133


>sp|HPRL2_HALWC|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16854

Query: 2 GGANAAIC 9
GG AAIC
Sbjct: 126 GGTLAAIC 133


>sp|HPRL2_HALVD|HGPRTASE-LIKE protein 2|Haloferax volcanii (strain ATCC 29605

Query: 2 GGANAAIC 9
GG AAIC
Sbjct: 126 GGTLAAIC 133


>sp|HPRL2_HALTV|HGPRTASE-LIKE protein 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 GGANAAIC 9
GG AAIC
Sbjct: 126 GGTLAAIC 133


>sp|HPRL1_HALJB|HGPRTASE-LIKE protein 1|Halalkalicoccus jeotgali (strain DSM 18796

Query: 2 GGANAAIC 9
GG AAIC
Sbjct: 126 GGTLAAIC 133




101|SequenceR|510|501|APMSDNGGAN

>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 APMSDNG 7
AP+ DNG
Sbjct: 357 APIDDNG 363


>sp|RNP3_HALS3|RIBONUCLEASE P protein component 3|Halobacterium salinarum (strain ATCC 29341

Query: 1 APMSDNGGAN 10
APM+D G N
Sbjct: 105 APMADGGDVN 114


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PMSDNGG 8
PMS NGG
Sbjct: 299 PMSINGG 305


>sp|PYRH_HALWD|URIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 APMSDNGGAN 10
APMS + GA+
Sbjct: 172 APMSRDAGAS 181


>sp|PYRH_HALLT|URIDYLATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PMSDNGGAN 10
PMS N GA+
Sbjct: 173 PMSRNAGAS 181


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 APMSDNG 7
AP+S+NG
Sbjct: 177 APLSENG 183


>sp|HPPA_PYRAE|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Pyrobaculum aerophilum (strain

Query: 1 APMSDNGGA 9
P+SDN G
Sbjct: 442 GPVSDNAGG 450




102|SequenceR|515|506|RVHLHAPMSD

>sp|CIMA_METAC|PUTATIVE (R)-citramalate synthase CimA|Methanosarcina acetivorans (strain

Query: 2 VHLHAPMSD 10
+HL AP+SD
Sbjct: 81 IHLVAPVSD 89


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 3 HLHAPMSD 10
HL AP+SD
Sbjct: 209 HLRAPISD 216


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 3 HLHAPMS 9
H H PMS
Sbjct: 57 HTHVPMS 63


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 3 HLHAPMS 9
H H PMS
Sbjct: 57 HTHVPMS 63


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 3 HLHAPMS 9
H H PMS
Sbjct: 57 HTHVPMS 63


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 3 HLHAPMS 9
H H PMS
Sbjct: 57 HTHVPMS 63


>sp|RS17_SULAC|SMALL ribosomal subunit protein uS17|Sulfolobus acidocaldarius (strain

Query: 1 RVHLHAP 7
R+H+H P
Sbjct: 76 RIHVHIP 82


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 2 VHLHAPM 8
+H HAP+
Sbjct: 277 LHFHAPL 283


>sp|Y1311_METJA|UNCHARACTERIZED protein MJ1311|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LHAPMSD 10
+HAP SD
Sbjct: 77 VHAPFSD 83


>sp|RS17_SULTO|SMALL ribosomal subunit protein uS17|Sulfurisphaera tokodaii (strain

Query: 1 RVHLHAP 7
R+H+H P
Sbjct: 76 RIHVHIP 82


>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 3 HLHAPMS 9
H H PMS
Sbjct: 57 HTHIPMS 63


>sp|COBS_PYRAE|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 HLHAPM 8
HLH+P+
Sbjct: 112 HLHSPL 117


>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 2 VHLHAPMSD 10
VHL P+SD
Sbjct: 96 VHLVVPVSD 104


>sp|RS17_SACS2|SMALL ribosomal subunit protein uS17|Saccharolobus solfataricus (strain

Query: 1 RVHLHAP 7
R+H H P
Sbjct: 76 RIHAHVP 82


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 2 VHLHAPMSD 10
VHL P+SD
Sbjct: 96 VHLVVPVSD 104


>sp|CIMA_METMA|PUTATIVE (R)-citramalate synthase CimA|Methanosarcina mazei (strain ATCC

Query: 2 VHLHAPMSD 10
+HL P+SD
Sbjct: 81 IHLVVPVSD 89




103|SequenceR|520|511|DPSYSRVHLH

>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DPSYSRVH 8
DPSYS+ H
Sbjct: 180 DPSYSQYH 187


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DPSYSRV 7
DPSY+R+
Sbjct: 45 DPSYARM 51


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 SRVHLH 10
SRVHLH
Sbjct: 511 SRVHLH 516


>sp|Y2425_METAR|PROTEIN UNCMA_24250|Methanocella arvoryzae (strain DSM 22066

Query: 1 DPSYSRVH 8
DP + RVH
Sbjct: 82 DPRFPRVH 89


>sp|COXX_HYPBU|PROTOHEME IX farnesyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 DPSYSR 6
DP+YSR
Sbjct: 265 DPNYSR 270


>sp|ARLY_METST|ARGININOSUCCINATE lyase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DPSYSRVHL 9
DPS+ +H+
Sbjct: 76 DPSFEDIHM 84


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DPSYSRVHL 9
+P+Y+ +HL
Sbjct: 498 NPNYATIHL 506


>sp|RL24_NANEQ|LARGE ribosomal subunit protein uL24|Nanoarchaeum equitans (strain

Query: 1 DPSYSRVHL 9
DP Y RV+L
Sbjct: 84 DPKYYRVYL 92


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DPSYSR 6
DP+YSR
Sbjct: 145 DPTYSR 150


>sp|Y1602_METBF|UNCHARACTERIZED protein Mbar_A1602|Methanosarcina barkeri (strain Fusaro /

Query: 1 DPSYSRVHL 9
D S+S++H+
Sbjct: 360 DQSFSKIHV 368




104|SequenceR|525|516|PQHPWDPSYS

>sp|RS4_ARCFU|SMALL ribosomal subunit protein uS4|Archaeoglobus fulgidus (strain ATCC

Query: 1 PQHPWDPS 8
P HPWD +
Sbjct: 14 PTHPWDKA 21


>sp|RS4_METBU|SMALL ribosomal subunit protein uS4|Methanococcoides burtonii (strain

Query: 1 PQHPW 5
PQHPW
Sbjct: 14 PQHPW 18


>sp|RS4_PICTO|SMALL ribosomal subunit protein uS4|Picrophilus torridus (strain ATCC

Query: 1 PQHPWD 6
P+HPW+
Sbjct: 14 PRHPWE 19


>sp|RS4_THEAC|SMALL ribosomal subunit protein uS4|Thermoplasma acidophilum (strain

Query: 1 PQHPWD 6
P+HPW+
Sbjct: 14 PRHPWE 19


>sp|RS4_THEVO|SMALL ribosomal subunit protein uS4|Thermoplasma volcanium (strain ATCC

Query: 1 PQHPWD 6
P+HPW+
Sbjct: 14 PRHPWE 19


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PWDPS 8
PWDPS
Sbjct: 142 PWDPS 146


>sp|RS4_METJA|SMALL ribosomal subunit protein uS4|Methanocaldococcus jannaschii

Query: 1 PQHPW 5
P HPW
Sbjct: 15 PNHPW 19


>sp|COFG_METPE|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PQHPW 5
P+HPW
Sbjct: 272 PEHPW 276


>sp|RS4_METMA|SMALL ribosomal subunit protein uS4|Methanosarcina mazei (strain ATCC

Query: 1 PQHPW 5
P+HPW
Sbjct: 14 PRHPW 18


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PWDPS 8
PWDPS
Sbjct: 142 PWDPS 146


>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PQHPW 5
P+HPW
Sbjct: 272 PEHPW 276


>sp|RS4_METTH|SMALL ribosomal subunit protein uS4|Methanothermobacter

Query: 1 PQHPWD 6
P HPW+
Sbjct: 14 PPHPWN 19


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 2 QHPWDPS 8
Q PW PS
Sbjct: 479 QKPWSPS 485


>sp|SFSA_METTH|SUGAR fermentation stimulation protein homolog|Methanothermobacter

Query: 1 PQHPWDPSYS 10
P H DP +S
Sbjct: 188 PNHEMDPEFS 197


>sp|RS4_METAC|SMALL ribosomal subunit protein uS4|Methanosarcina acetivorans (strain

Query: 1 PQHPW 5
P+HPW
Sbjct: 14 PKHPW 18


>sp|FAEHP_METMJ|BIFUNCTIONAL enzyme Fae/Hps|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 QHPWDPSY 9
Q WDP Y
Sbjct: 167 QRLWDPPY 174


>sp|FAEHP_METB6|BIFUNCTIONAL enzyme Fae/Hps|Methanoregula boonei (strain DSM 21154

Query: 2 QHPWDPSY 9
Q WDP Y
Sbjct: 167 QRLWDPPY 174


>sp|RS4_THEKO|SMALL ribosomal subunit protein uS4|Thermococcus kodakarensis (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PSHPW 18


>sp|PURQ_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QHPWDPSYS 10
++PW+P+ S
Sbjct: 192 EYPWNPNGS 200


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 1 PQHPW 5
P+HPW
Sbjct: 272 PEHPW 276


>sp|RS4_METBF|SMALL ribosomal subunit protein uS4|Methanosarcina barkeri (strain

Query: 1 PQHPW 5
P+HPW
Sbjct: 14 PRHPW 18


>sp|RS4_THEON|SMALL ribosomal subunit protein uS4|Thermococcus onnurineus (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PSHPW 18


>sp|RS4_STAMF|SMALL ribosomal subunit protein uS4|Staphylothermus marinus (strain

Query: 1 PQHPW 5
P+HPW
Sbjct: 14 PRHPW 18


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 1 PQHPW 5
P+HPW
Sbjct: 221 PKHPW 225


>sp|DUT_AERPE|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Aeropyrum pernix

Query: 5 WDPSYS 10
WDP Y+
Sbjct: 106 WDPGYT 111


>sp|RS4_THESM|SMALL ribosomal subunit protein uS4|Thermococcus sibiricus (strain DSM

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PSHPW 18


>sp|RS4_METST|SMALL ribosomal subunit protein uS4|Methanosphaera stadtmanae (strain

Query: 1 PQHPWD 6
P HPW+
Sbjct: 14 PSHPWN 19


>sp|GLMU_METMP|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain DSM 14266

Query: 3 HPWD 6
HPWD
Sbjct: 212 HPWD 215


>sp|GLMU_METM7|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C7 /

Query: 3 HPWD 6
HPWD
Sbjct: 212 HPWD 215


>sp|GLMU_METM5|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C5 /

Query: 3 HPWD 6
HPWD
Sbjct: 212 HPWD 215


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 1 PQHPW 5
PQ+PW
Sbjct: 222 PQNPW 226


>sp|RS4_THEGJ|SMALL ribosomal subunit protein uS4|Thermococcus gammatolerans (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PSHPW 18


>sp|GLCT_SACS2|GLUCOSE import system permease protein|Saccharolobus solfataricus (strain

Query: 1 PQHPWDPSYS 10
PQ PW S S
Sbjct: 139 PQFPWLSSTS 148


>sp|RRP4_SULAC|EXOSOME complex component Rrp4|Sulfolobus acidocaldarius (strain ATCC

Query: 2 QHPWDPSY 9
Q PW P Y
Sbjct: 27 QVPWSPYY 34


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 QHPWDPS 8
+HPW P+
Sbjct: 3 KHPWLPN 9


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 3 HPWDPSYS 10
HPW P+ S
Sbjct: 4 HPWLPNIS 11


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC

Query: 1 PQHPW 5
P+HPW
Sbjct: 14 PKHPW 18


>sp|RRP4_SULTO|EXOSOME complex component Rrp4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QHPWDPSY 9
Q PW P Y
Sbjct: 26 QIPWSPYY 33


>sp|Y101_ARCFU|UNCHARACTERIZED protein AF_0101|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PWDPSY 9
PW+P Y
Sbjct: 176 PWEPRY 181


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 QHPWDPS 8
+HPW P+
Sbjct: 3 KHPWLPN 9


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 QHPWDPS 8
+HPW P+
Sbjct: 3 KHPWLPN 9


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 QHPWDPS 8
+HPW P+
Sbjct: 3 KHPWLPN 9


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 QHPWDPS 8
+HPW P+
Sbjct: 3 KHPWLPN 9


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 QHPWDPS 8
+HPW P+
Sbjct: 3 KHPWLPN 9


>sp|RS4_HYPBU|SMALL ribosomal subunit protein uS4|Hyperthermus butylicus (strain DSM

Query: 1 PQHPW 5
P+HPW
Sbjct: 14 PKHPW 18


>sp|PURQ_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 QHPWDPSYS 10
++PW+P+ S
Sbjct: 191 EYPWNPNGS 199


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 QHPWDPS 8
+HPW P+
Sbjct: 3 KHPWLPN 9


>sp|RS4_METMP|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PNHPW 18


>sp|RS4_METVS|SMALL ribosomal subunit protein uS4|Methanococcus vannielii (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PNHPW 18


>sp|RS4_METS3|SMALL ribosomal subunit protein uS4|Methanobrevibacter smithii (strain

Query: 1 PQHPWD 6
P HPW+
Sbjct: 14 PPHPWN 19


>sp|RS4_METM6|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PNHPW 18


>sp|RS4_METM5|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PNHPW 18


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum

Query: 2 QHPWDPS 8
+HPW P+
Sbjct: 2 EHPWIPN 8


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PQHPWDPSY 9
P +DPSY
Sbjct: 74 PAEAFDPSY 82


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PQHPWDPS 8
PQ P+ PS
Sbjct: 358 PQEPYQPS 365


>sp|RS4_NANEQ|SMALL ribosomal subunit protein uS4|Nanoarchaeum equitans (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 11 PSHPW 15


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 3 HPWDPSYS 10
HP PSY+
Sbjct: 390 HPLKPSYT 397


>sp|RS4_METAR|SMALL ribosomal subunit protein uS4|Methanocella arvoryzae (strain DSM

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PNHPW 18


>sp|HMEC_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus fulgidus

Query: 3 HPWDPS 8
+PWDP+
Sbjct: 278 NPWDPA 283


>sp|RS4_METM7|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PNHPW 18


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PWDP 7
PWDP
Sbjct: 353 PWDP 356


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 1 PQHPWDPS 8
PQ P DPS
Sbjct: 385 PQEPGDPS 392


>sp|RS4_THEPD|SMALL ribosomal subunit protein uS4|Thermofilum pendens (strain DSM

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PSHPW 18


>sp|RS4_META3|SMALL ribosomal subunit protein uS4|Methanococcus aeolicus (strain ATCC

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PNHPW 18


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 4 PWDP 7
PWDP
Sbjct: 148 PWDP 151


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 3 HPWDPS 8
HPW P+
Sbjct: 4 HPWLPN 9


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 3 HPWDPS 8
HPW P+
Sbjct: 4 HPWIPN 9


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 HPWDPSY 9
HPW SY
Sbjct: 256 HPWQTSY 262


>sp|FAEHP_METTP|BIFUNCTIONAL enzyme Fae/Hps|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 WDPSY 9
WDP Y
Sbjct: 170 WDPPY 174


>sp|FAEHP_METHJ|BIFUNCTIONAL enzyme Fae/Hps|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 WDPSY 9
WDP Y
Sbjct: 170 WDPPY 174


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 PWDPSY 9
PWDP +
Sbjct: 572 PWDPKW 577


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PWDPSY 9
PWDP +
Sbjct: 519 PWDPEW 524


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 PWDPSY 9
PWDP +
Sbjct: 519 PWDPEW 524


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 3 HPWD 6
HPWD
Sbjct: 709 HPWD 712


>sp|RS4_METKA|SMALL ribosomal subunit protein uS4|Methanopyrus kandleri (strain AV19

Query: 1 PQHPWD 6
P+HPW+
Sbjct: 14 PRHPWE 19


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 PWDPSY 9
PWDP +
Sbjct: 519 PWDPEW 524


>sp|RS4_SACI7|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PGHPW 18


>sp|RS4_SACI6|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PGHPW 18


>sp|RS4_SACI4|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PGHPW 18


>sp|RS4_SACI3|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PGHPW 18


>sp|RS4_SACI2|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PGHPW 18


>sp|RS4_SACI1|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PGHPW 18


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PWDPSY 9
PWDP +
Sbjct: 519 PWDPDW 524


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PWDPSY 9
PWDP +
Sbjct: 519 PWDPDW 524


>sp|RS4_PYRFU|SMALL ribosomal subunit protein uS4|Pyrococcus furiosus (strain ATCC

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PPHPW 18


>sp|RS4_PYRAB|SMALL ribosomal subunit protein uS4|Pyrococcus abyssi (strain GE5 /

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PPHPW 18


>sp|RS4_PYRHO|SMALL ribosomal subunit protein uS4|Pyrococcus horikoshii (strain ATCC

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PPHPW 18


>sp|RS4_SULAC|SMALL ribosomal subunit protein uS4|Sulfolobus acidocaldarius (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PSHPW 18


>sp|HMEC_ARCPA|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus profundus

Query: 3 HPWDPS 8
+PWDP+
Sbjct: 280 NPWDPN 285


>sp|FAEHP_METBF|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina barkeri (strain Fusaro /

Query: 5 WDPSY 9
WDP Y
Sbjct: 170 WDPPY 174


>sp|SURE_AERPE|5'-NUCLEOTIDASE SurE|Aeropyrum pernix (strain ATCC 700893

Query: 3 HPWDPS 8
HP DPS
Sbjct: 238 HPLDPS 243


>sp|FAEHP_METAC|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 WDPSY 9
WDP Y
Sbjct: 170 WDPPY 174


>sp|FAEHP_METMA|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 WDPSY 9
WDP Y
Sbjct: 170 WDPPY 174


>sp|FAEHP_ARCFU|BIFUNCTIONAL enzyme Fae/Hps|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WDPSY 9
WDP Y
Sbjct: 171 WDPPY 175


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PQHPWDPSY 9
P H +D SY
Sbjct: 171 PPHEFDSSY 179


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 PWDPSY 9
PWDP +
Sbjct: 503 PWDPDW 508


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 PWDP 7
PWDP
Sbjct: 353 PWDP 356


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 3 HPWDPS 8
HPW P+
Sbjct: 4 HPWLPN 9


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 4 PWDP 7
PWDP
Sbjct: 351 PWDP 354


>sp|RS4_SACS2|SMALL ribosomal subunit protein uS4|Saccharolobus solfataricus (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PGHPW 18


>sp|RS4_IGNH4|SMALL ribosomal subunit protein uS4|Ignicoccus hospitalis (strain

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PGHPW 18


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 4 PWDP 7
PWDP
Sbjct: 351 PWDP 354


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PWDP 7
PWDP
Sbjct: 351 PWDP 354


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PQHPWD 6
P+HP+D
Sbjct: 470 PKHPYD 475


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PWDP 7
PWDP
Sbjct: 351 PWDP 354


>sp|RS4_SULTO|SMALL ribosomal subunit protein uS4|Sulfurisphaera tokodaii (strain DSM

Query: 1 PQHPW 5
P HPW
Sbjct: 14 PGHPW 18


>sp|SEPS_METKA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 PWDPS 8
PW+PS
Sbjct: 363 PWEPS 367


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 PWDP 7
PWDP
Sbjct: 351 PWDP 354


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PQHPWDPSY 9
P HP P Y
Sbjct: 427 PYHPSHPEY 435


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PQHPWDPSYS 10
P WD SYS
Sbjct: 429 PSINWDESYS 438


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 700922

Query: 1 PQHPWDPSYS 10
P WD SYS
Sbjct: 427 PAINWDESYS 436


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 1 PQHPWDPSYS 10
P WD SYS
Sbjct: 427 PAINWDESYS 436




105|SequenceR|530|521|AFTKNPQHPW

>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 NPQHPW 10
NP+HPW
Sbjct: 271 NPEHPW 276


>sp|COFG_METPE|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 NPQHPW 10
NP+HPW
Sbjct: 271 NPEHPW 276


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 5 NPQHPW 10
NP+HPW
Sbjct: 271 NPEHPW 276


>sp|RBL_METAC|RIBULOSE bisphosphate carboxylase|Methanosarcina acetivorans (strain ATCC

Query: 1 AFTKNPQH 8
AFT+NP+H
Sbjct: 276 AFTRNPRH 283


>sp|RS4_METBU|SMALL ribosomal subunit protein uS4|Methanococcoides burtonii (strain

Query: 6 PQHPW 10
PQHPW
Sbjct: 14 PQHPW 18


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AFTKNPQH 8
AFT+NP+H
Sbjct: 279 AFTRNPKH 286


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AFTKNPQH 8
AFT+NP+H
Sbjct: 284 AFTRNPRH 291


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 AFTKNPQH 8
AFT+NP+H
Sbjct: 283 AFTRNPKH 290


>sp|RBL_METBF|RIBULOSE bisphosphate carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AFTKNPQH 8
A+T+NP+H
Sbjct: 276 AYTRNPRH 283


>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AFTKNPQH 8
A+T+NP+H
Sbjct: 276 AYTRNPRH 283


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 1 AFTKNPQH 8
AFT+NP H
Sbjct: 287 AFTRNPYH 294


>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 NPQHP 9
NPQHP
Sbjct: 195 NPQHP 199


>sp|MTRD_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanocaldococcus jannaschii (strain

Query: 3 TKNPQHPW 10
TK+PQ P+
Sbjct: 120 TKDPQKPY 127


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 AFTKNPQHP 9
A+T+N +HP
Sbjct: 274 AYTENIKHP 282


>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 5 NPQHPW 10
NP+ PW
Sbjct: 304 NPEAPW 309


>sp|RS4_PYRFU|SMALL ribosomal subunit protein uS4|Pyrococcus furiosus (strain ATCC

Query: 5 NPQHP 9
NPQHP
Sbjct: 162 NPQHP 166


>sp|RS4_PYRAB|SMALL ribosomal subunit protein uS4|Pyrococcus abyssi (strain GE5 /

Query: 5 NPQHP 9
NPQHP
Sbjct: 162 NPQHP 166


>sp|RS4_PYRHO|SMALL ribosomal subunit protein uS4|Pyrococcus horikoshii (strain ATCC

Query: 5 NPQHP 9
NPQHP
Sbjct: 162 NPQHP 166


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 NPQHPW 10
NP+ PW
Sbjct: 271 NPEAPW 276


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 TKNPQHPW 10
TK+P PW
Sbjct: 211 TKSPNTPW 218


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 5 NPQHPW 10
NP+ PW
Sbjct: 304 NPEAPW 309


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 5 NPQHPW 10
NP+ PW
Sbjct: 304 NPEAPW 309


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 5 NPQHPW 10
NP+ PW
Sbjct: 304 NPEAPW 309


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 1 AFTKNPQHPW 10
A+ K+P PW
Sbjct: 116 AWPKSPVAPW 125


>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 NPQHPW 10
NP+ PW
Sbjct: 267 NPESPW 272


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 2 FTKNPQH 8
FT+NP H
Sbjct: 288 FTRNPYH 294


>sp|CBID_METBF|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 4 KNPQHP 9
K+P+HP
Sbjct: 299 KDPEHP 304


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 5 NPQHPW 10
NP+ PW
Sbjct: 282 NPEAPW 287


>sp|TFE_PYRAB|TRANSCRIPTION factor E|Pyrococcus abyssi (strain GE5 /

Query: 5 NPQHP 9
NP+HP
Sbjct: 118 NPEHP 122


>sp|THIL_NITMS|THIAMINE-MONOPHOSPHATE kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 FTKNPQH 8
FT NP+H
Sbjct: 257 FTINPKH 263


>sp|KTHY_METBU|PROBABLE thymidylate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 FTKNPQHPW 10
FTK P W
Sbjct: 34 FTKEPTTSW 42


>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 2 FTKNPQHP 9
++NP HP
Sbjct: 197 LSENPDHP 204


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 2 FTKNPQHP 9
TK P HP
Sbjct: 482 LTKTPLHP 489


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 2 FTKNPQHP 9
TK P HP
Sbjct: 482 LTKTPLHP 489


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 KNPQHP 9
KNP HP
Sbjct: 208 KNPYHP 213


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 NPQHPW 10
NP+ PW
Sbjct: 309 NPEAPW 314


>sp|YC9A_METJA|UNCHARACTERIZED protein MJ1292.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 NPQHPW 10
NP PW
Sbjct: 144 NPSDPW 149


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 3 TKNPQHP 9
TK P HP
Sbjct: 483 TKTPLHP 489


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 TKNPQHP 9
TK P HP
Sbjct: 483 TKTPLHP 489


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 3 TKNPQHP 9
TK P HP
Sbjct: 488 TKTPLHP 494


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 FTKNPQHP 9
F +NP++P
Sbjct: 375 FNQNPEYP 382


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AFTKNPQHPW 10
A TK P PW
Sbjct: 92 AATKKPLPPW 101


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FTKNPQ 7
FTKNP+
Sbjct: 333 FTKNPK 338


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 KNPQHPW 10
K+P+ PW
Sbjct: 195 KSPETPW 201


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 5 NPQHPW 10
NP H W
Sbjct: 207 NPDHRW 212


>sp|COFG_METKA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanopyrus kandleri (strain AV19 /

Query: 5 NPQHPW 10
NP+ PW
Sbjct: 277 NPEAPW 282


>sp|TRPB2_PYRFU|TRYPTOPHAN synthase beta chain 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FTKNPQHP 9
++NP HP
Sbjct: 194 LSENPNHP 201




106|SequenceR|535|526|QNSIFAFTKN

***** No hits found ******


107|SequenceR|540|531|EGEGPQNSIF

>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GPQNSIF 10
GP+NSIF
Sbjct: 138 GPKNSIF 144


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GPQNSIF 10
GP+NSIF
Sbjct: 137 GPKNSIF 143


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 4 GPQNSIF 10
GP+NSIF
Sbjct: 134 GPRNSIF 140


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GPQNSIF 10
GP+NS+F
Sbjct: 139 GPKNSVF 145


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EGEGPQNSIF 10
EG+ P NSI+
Sbjct: 206 EGKNPANSIW 215


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 4 GPQNSIF 10
GP+NS+F
Sbjct: 137 GPKNSVF 143


>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGEGPQNSIF 10
EG+ P NSI+
Sbjct: 206 EGKNPANSIW 215


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GPQNSIF 10
GP NSIF
Sbjct: 134 GPTNSIF 140


>sp|LIVG_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 2 GEGPQNSIF 10
GE P NS+F
Sbjct: 111 GESPLNSLF 119


>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 EGEGPQNSIF 10
EG+ P NSI+
Sbjct: 206 EGKNPANSIW 215


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 3 EGPQNSI 9
EGP NSI
Sbjct: 624 EGPSNSI 630


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EGEGPQ 6
EGEGP+
Sbjct: 340 EGEGPE 345


>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain ATCC

Query: 1 EGEGPQNSIF 10
EGEGP F
Sbjct: 216 EGEGPDGKTF 225




108|SequenceR|545|536|RTSNAEGEGP

>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 4 NAEGEGP 10
NAE EGP
Sbjct: 105 NAEAEGP 111


>sp|FTSZ1_HALSA|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 RTSNAEGEGP 10
R AEG+GP
Sbjct: 362 RNEAAEGDGP 371


>sp|FTSZ1_HALS3|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 RTSNAEGEGP 10
R AEG+GP
Sbjct: 362 RNEAAEGDGP 371




109|SequenceR|550|541|FPVTARTSNA

>sp|ACDD_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit delta|Archaeoglobus fulgidus

Query: 1 FPVTARTSNA 10
FP+++ T+NA
Sbjct: 361 FPISSGTTNA 370


>sp|ACDD2_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 FPVTARTSNA 10
FP+++ T+NA
Sbjct: 345 FPMSSGTTNA 354


>sp|ACDD1_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 FPVTARTSNA 10
FP+++ T+NA
Sbjct: 345 FPMSSGTTNA 354


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 FPVTARTSNA 10
FP+++ T+NA
Sbjct: 346 FPMSSGTTNA 355


>sp|ACDD_METMA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina mazei

Query: 1 FPVTARTSNA 10
FP+++ T+NA
Sbjct: 345 FPMSSGTTNA 354


>sp|ACDD1_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 FPVTARTSNA 10
FP+++ T+NA
Sbjct: 345 FPMSSGTTNA 354




110|SequenceR|555|546|KIDFPFPVTA

>sp|IDI2_THEKO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KIDFPFPVTA 10
K +FP+P+ A
Sbjct: 193 KAEFPYPIIA 202


>sp|IDI2_THEON|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus onnurineus (strain NA1)

Query: 1 KIDFPFPVTA 10
K +FP+P+ A
Sbjct: 193 KAEFPYPIIA 202


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 3 DFPFP 7
DFPFP
Sbjct: 12 DFPFP 16


>sp|FAU1_HALMA|PROBABLE ribonuclease FAU-1|Haloarcula marismortui (strain ATCC 43049

Query: 1 KIDFPFPVT 9
+ DFPF VT
Sbjct: 299 ETDFPFAVT 307


>sp|Y094_METJA|UNCHARACTERIZED protein MJ0094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIDFPFP 7
KID P+P
Sbjct: 169 KIDIPYP 175


>sp|TDXH_THEVO|PEROXIREDOXIN volcanium (strain ATCC 51530

Query: 2 IDFPFPVTA 10
ID PFP+ A
Sbjct: 89 IDIPFPIIA 97


>sp|Y1255_METJA|UNCHARACTERIZED glycosyltransferase MJ1255|Methanocaldococcus jannaschii (strain

Query: 3 DFPFPVT 9
DFP P T
Sbjct: 157 DFPLPYT 163


>sp|AHBD_METBF|ADOMET-DEPENDENT heme synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KIDFPFPV 8
K DFPF +
Sbjct: 145 KADFPFQI 152


>sp|TDXH1_PICTO|PEROXIREDOXIN 1|Picrophilus torridus (strain ATCC 700027

Query: 1 KIDFPFPVTA 10
KID FP+ A
Sbjct: 92 KIDIKFPIIA 101


>sp|RL10E_METKA|LARGE ribosomal subunit protein uL16|Methanopyrus kandleri (strain AV19 /

Query: 2 IDFPFPVT 9
+ FPFP T
Sbjct: 154 MKFPFPFT 161


>sp|TDXH1_THEAC|PEROXIREDOXIN 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KIDFPFPV 8
KI+ PFP+
Sbjct: 94 KIEVPFPI 101


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 3 DFPFPVTA 10
D P PVTA
Sbjct: 67 DLPQPVTA 74


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 3 DFPFPVTA 10
D P PVTA
Sbjct: 67 DLPQPVTA 74


>sp|PYRD_HALMA|DIHYDROOROTATE dehydrogenase (quinone)|Haloarcula marismortui (strain ATCC 43049

Query: 2 IDFPFPV 8
+D PFPV
Sbjct: 135 VDAPFPV 141


>sp|Y1969_ARCFU|PROTEIN AF_1969|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IDFPFPV 8
I FP+PV
Sbjct: 59 IGFPYPV 65


>sp|NFI_SULAC|ENDONUCLEASE V|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KIDFPF 6
K+DFP+
Sbjct: 65 KVDFPY 70


>sp|RSMA_ARCFU|PROBABLE ribosomal RNA small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 KIDFPF 6
K+DFP+
Sbjct: 88 KVDFPY 93




111|SequenceR|560|551|AIILTKIDFP

>sp|CSA2B_SACS2|CRISPR-ASSOCIATED aCascade subunit Cas7/Csa2 2|Saccharolobus solfataricus (strain

Query: 1 AIILTKIDFP 10
++++TK DFP
Sbjct: 249 SLVVTKTDFP 258


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 4 LTKIDFP 10
LTKI FP
Sbjct: 13 LTKIQFP 19


>sp|FTSY_SULAC|SIGNAL recognition particle receptor FtsY|Sulfolobus acidocaldarius

Query: 1 AIILTKID 8
A+ILTK+D
Sbjct: 316 AVILTKVD 323


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 IILTKIDFP 10
IIL KID P
Sbjct: 412 IILEKIDAP 420


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 IILTKIDFP 10
++LT DFP
Sbjct: 528 VVLTAPDFP 536


>sp|Y061_SULTO|PUTATIVE esterase STK_00610|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AIILTKIDF 9
II+T IDF
Sbjct: 49 GIIMTAIDF 57


>sp|PROF_THOAA|THOR profilin|Thorarchaeota archaeon (strain AB_25)

Query: 2 IILTKID 8
+ILTKID
Sbjct: 87 LILTKID 93


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC

Query: 2 IILTKIDF 9
I+L K+DF
Sbjct: 25 IVLAKVDF 32


>sp|FTSY_METJA|SIGNAL recognition particle receptor FtsY|Methanocaldococcus jannaschii

Query: 1 AIILTKID 8
IILTK+D
Sbjct: 345 GIILTKVD 352




112|SequenceR|565|556|FGMTTAIILT

>sp|RL5_THEVO|LARGE ribosomal subunit protein uL5|Thermoplasma volcanium (strain ATCC

Query: 1 FGMTTAIIL 9
FGM AI+L
Sbjct: 119 FGMDVAIVL 127


>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 1 FGMTTAIIL 9
+GM TA++L
Sbjct: 221 YGMLTAVLL 229




113|SequenceR|570|561|GLFSIFGMTT

>sp|Y601_METMP|PROBABLE minor pilin MMP0601|Methanococcus maripaludis (strain DSM 14266

Query: 1 GLFSIFGM 8
G FS+FG+
Sbjct: 146 GFFSLFGL 153


>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter thermautotrophicus

Query: 1 GLFSIFGMT 9
GLF+IF MT
Sbjct: 99 GLFAIFQMT 107




114|SequenceR|575|566|CFLVVGLFSI

>sp|Y687_METJA|UNCHARACTERIZED protein MJ0687|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLVVGLF 8
FL+VG+F
Sbjct: 11 FLIVGVF 17


>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 CFLVVGL 7
CFL +GL
Sbjct: 93 CFLALGL 99


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 CFLVVGL 7
CFL +GL
Sbjct: 93 CFLALGL 99


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 CFLVVGL 7
CFL +GL
Sbjct: 96 CFLAMGL 102


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 CFLVVGLFSI 10
C L++G++ I
Sbjct: 633 CILILGIYPI 642




115|SequenceR|580|571|FLLVLCFLVV

>sp|Y1070_METJA|UNCHARACTERIZED protein MJ1070|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLVLCFLV 9
LL++CFL+
Sbjct: 146 LLIICFLI 153


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FLLVLCFLVV 10
FLL CFL V
Sbjct: 227 FLLYSCFLSV 236


>sp|MTRA_METST|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosphaera stadtmanae (strain

Query: 1 FLLVLCFLVV 10
F+L L FL++
Sbjct: 235 FILTLVFLII 244


>sp|Y433_METJA|UNCHARACTERIZED protein MJ0433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLLVLCFLV 9
FL+ LCFL+
Sbjct: 164 FLVALCFLI 172




116|SequenceR|585|576|GRSWLFLLVL

>sp|Y505_METJA|UNCHARACTERIZED protein MJ0505|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RSWLFLLV 9
RS+LFL+V
Sbjct: 68 RSYLFLIV 75


>sp|Y35K_HALSI|UNCHARACTERIZED 36 kDa protein|Halobacterium salinarum (Halobacterium halobium)

Query: 1 GRSWLFLLVL 10
GR W +L +L
Sbjct: 135 GREWEYLAIL 144


>sp|GCSH1_SULAC|PROBABLE glycine cleavage system H|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GRSWLFLL 8
GR W+F L
Sbjct: 104 GRGWIFKL 111


>sp|SDO1_PYRAB|RIBOSOME maturation protein SDO1 homolog|Pyrococcus abyssi (strain GE5 /

Query: 3 SWLFLL 8
SWLFL+
Sbjct: 199 SWLFLI 204


>sp|LEUD1_METKA|3-ISOPROPYLMALATE dehydratase small subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 1 GRSWLF 6
GR+W+F
Sbjct: 7 GRAWVF 12


>sp|RNP1_THEKO|RIBONUCLEASE P protein component 1|Thermococcus kodakarensis (strain ATCC

Query: 1 GRSWLF 6
GR+W+F
Sbjct: 25 GRAWIF 30


>sp|RNP1_PYRAB|RIBONUCLEASE P protein component 1|Pyrococcus abyssi (strain GE5 /

Query: 1 GRSWLF 6
GR+W+F
Sbjct: 25 GRTWIF 30


>sp|RNP1_PYRHO|RIBONUCLEASE P protein component 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GRSWLF 6
GR+W+F
Sbjct: 25 GRTWIF 30


>sp|RNP1_PYRFU|RIBONUCLEASE P protein component 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GRSWLF 6
GR+W+F
Sbjct: 25 GRTWIF 30




117|SequenceR|590|581|KTNGKGRSWL

>sp|COFE_HALMA|COENZYME F420:L-glutamate ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 KTNGKGRS 8
K NG+GRS
Sbjct: 43 KANGRGRS 50


>sp|HEM1_METHJ|GLUTAMYL-TRNA reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 KGRSW 9
KGRSW
Sbjct: 257 KGRSW 261


>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KTNGKGRSW 9
K +G+GR W
Sbjct: 65 KWHGEGRPW 73


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KTNGKGRSW 9
K +G+GR W
Sbjct: 65 KWHGEGRPW 73


>sp|Y870_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 TNGKGRSWL 10
TNG G+S L
Sbjct: 372 TNGSGKSTL 380


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 TNGKGRSWL 10
TNG G+S L
Sbjct: 347 TNGSGKSTL 355


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KTNGKGRSWL 10
+ +G+G +WL
Sbjct: 869 EADGRGYAWL 878


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 GKGRSWL 10
G G+SW+
Sbjct: 428 GDGKSWI 434


>sp|RS9_AERPE|SMALL ribosomal subunit protein uS9|Aeropyrum pernix (strain ATCC

Query: 4 GKGRSWL 10
G+GR W+
Sbjct: 25 GRGRVWI 31


>sp|PUR7_PYRAB|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 KTNGKGRSWL 10
K KG+ WL
Sbjct: 35 KAKFKGKGWL 44


>sp|UDGA_SULTO|TYPE-4 uracil-DNA glycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GKGRSW 9
GK RSW
Sbjct: 203 GKNRSW 208


>sp|PUR7_THESM|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KTNGKGRSWL 10
K KG+ WL
Sbjct: 39 KAQFKGKGWL 48


>sp|PUR7_PYRHO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KTNGKGRSWL 10
K KG+ WL
Sbjct: 39 KARFKGKGWL 48




118|SequenceR|595|586|IEINHKTNGK

>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IEINHKTNGK 10
+ +N+KT+GK
Sbjct: 17 VGVNYKTSGK 26


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 EINHKTNGK 10
EIN +T+GK
Sbjct: 594 EINEQTSGK 602


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 1 IEINHKTNG 9
I+IN K NG
Sbjct: 96 IQINAKNNG 104


>sp|GUAAA_METMJ|GMP synthase [glutamine-hydrolyzing] subunit A|Methanoculleus

Query: 2 EINHKTNGK 10
E++H NG+
Sbjct: 164 EVSHTVNGR 172


>sp|SFSA_THEAC|SUGAR fermentation stimulation protein homolog|Thermoplasma acidophilum

Query: 2 EINHKTNGK 10
++ H TNG+
Sbjct: 213 DVGHGTNGR 221


>sp|Y643_PYRHO|UNCHARACTERIZED protein PH0643|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IEINHKTNGK 10
+EI K NGK
Sbjct: 149 LEIGLKVNGK 158


>sp|Y1397_PYRAB|UNCHARACTERIZED protein PYRAB13970|Pyrococcus abyssi (strain GE5 /

Query: 1 IEINHKTNGK 10
+EI K NGK
Sbjct: 144 LEIGLKVNGK 153


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 2 EINHKTN 8
E+N KTN
Sbjct: 59 EVNEKTN 65


>sp|LEU1_PYRAB|2-ISOPROPYLMALATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 IEINHKTNGK 10
+EI H T+GK
Sbjct: 391 VEIIHVTSGK 400


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IEINHKTNGK 10
IE+N+K GK
Sbjct: 367 IELNYKLVGK 376


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 5 HKTNGK 10
HK+NGK
Sbjct: 261 HKSNGK 266




119|SequenceR|600|591|RPVYEIEINH

>sp|MPTA_METTP|GTP cyclohydrolase MptA|Methanothrix thermoacetophila (strain DSM

Query: 1 RPVYEIE 7
RPVYEIE
Sbjct: 78 RPVYEIE 84


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 VYEIEINH 10
VYEIE+N+
Sbjct: 364 VYEIELNY 371


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 VYEIEINH 10
VYEIE+N+
Sbjct: 364 VYEIELNY 371


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 VYEIEINH 10
VYEIE+N+
Sbjct: 364 VYEIELNY 371


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RPVYEIEINH 10
RP+ E E++H
Sbjct: 409 RPLTEAELDH 418


>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain

Query: 2 PVYEIEINH 10
P+Y+ EIN+
Sbjct: 82 PLYDFEINN 90


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RPVYEIEINH 10
RP+ E E++H
Sbjct: 291 RPLTEAELDH 300


>sp|MPTA_METMA|GTP cyclohydrolase MptA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PVYEIE 7
PVYEIE
Sbjct: 83 PVYEIE 88


>sp|TRUB_METM7|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C7

Query: 1 RPVYEIEI 8
R +YEIEI
Sbjct: 137 RKIYEIEI 144


>sp|RPO1C_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Haloarcula marismortui (strain ATCC

Query: 1 RPVYEIEINH 10
R +E+ +NH
Sbjct: 344 RAAFEVTVNH 353


>sp|MPTA_METBF|GTP cyclohydrolase MptA|Methanosarcina barkeri (strain Fusaro /

Query: 2 PVYEIE 7
PVYEIE
Sbjct: 83 PVYEIE 88


>sp|MPTA_METAC|GTP cyclohydrolase MptA|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PVYEIE 7
PVYEIE
Sbjct: 83 PVYEIE 88


>sp|MPTA2_METAR|GTP cyclohydrolase MptA 2|Methanocella arvoryzae (strain DSM 22066

Query: 2 PVYEIE 7
PVYEIE
Sbjct: 78 PVYEIE 83


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC

Query: 1 RPVYEIEINH 10
+ +YE+ +NH
Sbjct: 13 KEIYELTVNH 22


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 1 RPVYEIEINH 10
R +E+ +NH
Sbjct: 338 RAAFEVTVNH 347


>sp|MPTA_METBU|GTP cyclohydrolase MptA|Methanococcoides burtonii (strain DSM 6242

Query: 2 PVYEIE 7
PVYEIE
Sbjct: 83 PVYEIE 88


>sp|TRUB_METM5|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C5

Query: 1 RPVYEIEI 8
R +YEIEI
Sbjct: 137 RKIYEIEI 144


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 1 RPVYEIEIN 9
RP Y IE++
Sbjct: 253 RPQYRIEVD 261


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C6

Query: 1 RPVYEIEI 8
R +YEIEI
Sbjct: 137 RKIYEIEI 144


>sp|TRUB_METMP|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain DSM

Query: 1 RPVYEIEI 8
R +YEIEI
Sbjct: 137 RKIYEIEI 144


>sp|UPP_THESM|URACIL phosphoribosyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 2 PVYEIEINH 10
P +EIE+N+
Sbjct: 116 PKFEIEMNY 124


>sp|RPO1C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 1 RPVYEIEINH 10
R +E+ +NH
Sbjct: 344 RAAFEVTVNH 353


>sp|RPO1C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 1 RPVYEIEINH 10
R +E+ +NH
Sbjct: 344 RAAFEVTVNH 353


>sp|EF2_KORCO|ELONGATION factor 2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PVYEIEIN 9
P+YEI+++
Sbjct: 631 PIYEIQVS 638


>sp|UPP_THEGJ|URACIL phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 PVYEIEINH 10
P +EIE+N+
Sbjct: 116 PKFEIEMNY 124


>sp|UPP_PYRFU|URACIL phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PVYEIEINH 10
P +EIE+N+
Sbjct: 116 PKFEIEMNY 124


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 2 PVYEIEINH 10
P EIE++H
Sbjct: 862 PYKEIEVSH 870


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 1 RPVYEIEINH 10
R +E+ +NH
Sbjct: 335 RAAFEVTVNH 344


>sp|RPO1C_HALMO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halococcus morrhuae (Micrococcus

Query: 1 RPVYEIEINH 10
R +E+ +NH
Sbjct: 335 RAAFEVTVNH 344




120|SequenceR|605|596|GADSKRPVYE

>sp|MSRA_METMA|PEPTIDE methionine sulfoxide reductase MsrA|Methanosarcina mazei (strain

Query: 1 GADSKRPVYE 10
G KRP YE
Sbjct: 83 GGHFKRPTYE 92


>sp|PURA_HALSA|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 3 DSKRPVYE 10
D+KR +YE
Sbjct: 164 DAKRAIYE 171


>sp|PURA_HALS3|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 3 DSKRPVYE 10
D+KR +YE
Sbjct: 164 DAKRAIYE 171


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GADSKRPVYE 10
G +SK+PV +
Sbjct: 71 GIESKKPVVQ 80


>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 1 GADSKRPVYE 10
G D+ +P++E
Sbjct: 332 GIDTVKPIFE 341


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GADSKRP 7
G+D KRP
Sbjct: 339 GSDDKRP 345




121|SequenceR|610|601|DASSIGADSK

***** No hits found ******


122|SequenceR|620|606|IMKMNFKRPADASSI

>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IMKMNFKRPADA 12
+M+ FKR +DA
Sbjct: 429 LMEYEFKRASDA 440


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KMNFKRPADASSI 15
KMNF+ DA+ I
Sbjct: 470 KMNFETHGDAAVI 482


>sp|FDHC_METFO|PROBABLE formate transporter|Methanobacterium formicicum

Query: 2 MKMNFKRPADAS 13
M +FK PAD +
Sbjct: 1 MASSFKSPADTA 12


>sp|CAS1_METKA|CRISPR-ASSOCIATED endonuclease Cas1|Methanopyrus kandleri (strain AV19 /

Query: 3 KMNFKRPADASSI 15
++ F RP ASSI
Sbjct: 97 RLAFARPLIASSI 109


>sp|RL15_METMA|LARGE ribosomal subunit protein uL15|Methanosarcina mazei (strain ATCC

Query: 3 KMNFKRPADAS 13
K FKRP + S
Sbjct: 51 KHGFKRPVEVS 61


>sp|FDHC_METTF|PROBABLE formate transporter|Methanothermobacter thermautotrophicus

Query: 2 MKMNFKRPADAS 13
M +FK PAD +
Sbjct: 1 MGSSFKSPADTA 12


>sp|SECD_METTH|PROTEIN-EXPORT membrane protein SecD|Methanothermobacter thermautotrophicus

Query: 1 IMKMNFKRPADASSI 15
++++ +RP DA+++
Sbjct: 44 LIQIQLERPVDAATM 58


>sp|RL15_HALLT|LARGE ribosomal subunit protein uL15|Halorubrum lacusprofundi (strain

Query: 3 KMNFKRPADASS 14
K FKRP A +
Sbjct: 49 KYGFKRPESAQT 60


>sp|IF5A_NATPD|TRANSLATION initiation factor 5A|Natronomonas pharaonis (strain ATCC 35678

Query: 3 KMNFKRPADA 12
K NF +P DA
Sbjct: 54 KRNFTQPVDA 63


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 7 KRPADASSI 15
KRP DA+++
Sbjct: 575 KRPEDATTV 583


>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 FKRPADASSI 15
F PA ASSI
Sbjct: 339 FVEPASASSI 348


>sp|Y816_METJA|UNCHARACTERIZED protein MJ0816|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 FKRPADAS 13
FK P DAS
Sbjct: 282 FKEPTDAS 289


>sp|KPRS_AERPE|RIBOSE-PHOSPHATE pyrophosphokinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IMKMNFKRPADASSI 15
I+ +F+RPA S +
Sbjct: 60 IVVQSFERPASRSLV 74




123|SequenceR|620|611|IMKMNFKRPA

>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IMKMNFKRP 9
I++ NFK P
Sbjct: 849 ILQANFKNP 857


>sp|RL24_PYRHO|LARGE ribosomal subunit protein uL24|Pyrococcus horikoshii (strain

Query: 2 MKMNFKRP 9
MKMN K+P
Sbjct: 1 MKMNSKQP 8




THE END