1|SequenceR|10|1|LLRHRSRRAM
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 LLRHRSRRAM 10
LLRHR AM
Sbjct: 2125 LLRHRCMSAM 2134
>sp|ST_POVJC|SMALL t antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 LRHRSRR 8
LRHR+R+
Sbjct: 118 LRHRNRK 124
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 LLRHRSRRA 9
LL H SRRA
Sbjct: 2894 LLEHLSRRA 2902
Query: 1 LLRHRSRRAM 10
LLRH S+ A+
Sbjct: 1377 LLRHSSQEAL 1386
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 LLRHRSRRAM 10
LLRHR AM
Sbjct: 2125 LLRHRCVSAM 2134
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 1 LLRHRSRRA 9
+LR R RRA
Sbjct: 1 MLRVRKRRA 9
>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 LRHRSR 7
LRHR+R
Sbjct: 194 LRHRAR 199
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LRHRSRRAM 10
L HR+R A+
Sbjct: 2109 LAHRTRNAL 2117
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LRHRSRRAM 10
L HR+R A+
Sbjct: 2109 LAHRTRNAL 2117
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LRHRSRRAM 10
L HR+R A+
Sbjct: 2109 LAHRTRNAL 2117
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LRHRSRRAM 10
L HR+R A+
Sbjct: 2109 LAHRTRNAL 2117
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LRHRSRRAM 10
L HR+R A+
Sbjct: 2109 LAHRTRNAL 2117
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 LLRHRSRRAM 10
LLRHR A+
Sbjct: 2127 LLRHRCASAL 2136
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 LLRHRSRRAM 10
LLRHR A+
Sbjct: 2127 LLRHRCASAL 2136
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LLRHRSRRAM 10
LLRHR A+
Sbjct: 2125 LLRHRCVSAL 2134
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 LLRHRSRRAM 10
LLRHR A+
Sbjct: 2125 LLRHRCVNAL 2134
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LLRHRSRRAM 10
LLRHR A+
Sbjct: 2125 LLRHRCVSAL 2134
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LLRHRSRRAM 10
LLRHR A+
Sbjct: 2125 LLRHRCVSAL 2134
2|SequenceR|15|6|RLLLLLLRHR
>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LLLLLLRH 9
+L LLLRH
Sbjct: 1 MLRLLLRH 8
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 RLLLLLLRH 9
RL L++RH
Sbjct: 216 RLFQLIMRH 224
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 RLLLLLLRH 9
RL L++RH
Sbjct: 216 RLFQLIMRH 224
>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin)
Query: 2 LLLLLLRH 9
+L LLLRH
Sbjct: 1 MLRLLLRH 8
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 1 RLLLLLL 7
RLLLLL+
Sbjct: 241 RLLLLLI 247
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 2 LLLLLLRH 9
LLLL L H
Sbjct: 74 LLLLCLHH 81
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 LLLLLLRH 9
LLLL L H
Sbjct: 74 LLLLCLHH 81
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 LLLLLRH 9
LLL LRH
Sbjct: 130 LLLALRH 136
3|SequenceR|20|11|AVVLYRLLLL
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 VVLYRLLLL 10
+VLYR LLL
Sbjct: 328 LVLYRQLLL 336
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 VVLYRLLLL 10
+VLYR LLL
Sbjct: 328 LVLYRQLLL 336
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 VVLYRLLLL 10
+VLYR LLL
Sbjct: 328 LVLYRQLLL 336
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 VVLYRLLLL 10
+VLYR LLL
Sbjct: 328 LVLYRQLLL 336
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 VVLYRLLLL 10
+VLYR LLL
Sbjct: 328 LVLYRQLLL 336
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 VVLYRLLLL 10
+VLYR LLL
Sbjct: 328 LVLYRQLLL 336
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 AVVLYRLLLL 10
AVV Y LLL+
Sbjct: 1236 AVVTYFLLLV 1245
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 LYRLLLL 10
+YR+LLL
Sbjct: 1316 VYRILLL 1322
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 LYRLLLL 10
+YR+LLL
Sbjct: 1312 VYRILLL 1318
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 LYRLLLL 10
+YR+LLL
Sbjct: 1316 VYRILLL 1322
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 3 VLYRLLLL 10
++YR LLL
Sbjct: 33 IIYRFLLL 40
4|SequenceR|25|16|KHYGLAVVLY
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 KHYGLAVVL 9
+H GLA++L
Sbjct: 386 RHTGLAIIL 394
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 4 GLAVVLY 10
GLAVVL+
Sbjct: 7 GLAVVLW 13
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 4 GLAVVLY 10
GLAVVL+
Sbjct: 7 GLAVVLW 13
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 KHYGLA 6
+HYGL+
Sbjct: 433 EHYGLS 438
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 KHYGLAVVLY 10
K YG+ VL+
Sbjct: 512 KAYGIDTVLF 521
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 2 HYGLA 6
HYG+A
Sbjct: 339 HYGIA 343
5|SequenceR|30|21|SFGYAKHYGL
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 4 YAKHYGL 10
YA+HYGL
Sbjct: 543 YARHYGL 549
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 GYAKHYGL 10
G+ KHYG+
Sbjct: 801 GFYKHYGI 808
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 GYAKHYGL 10
G+ KHYG+
Sbjct: 792 GFYKHYGI 799
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 GYAKHYGL 10
G+ KHYG+
Sbjct: 793 GFYKHYGI 800
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 GYAKHYGL 10
G+ KHYG+
Sbjct: 831 GFYKHYGV 838
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 4 YAKHY 8
YAKHY
Sbjct: 179 YAKHY 183
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 4 YAKHY 8
YAKHY
Sbjct: 179 YAKHY 183
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 GYAKHYG 9
G A+HYG
Sbjct: 648 GSAQHYG 654
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 2 FGYAKHYG 9
FG A+ YG
Sbjct: 468 FGLAREYG 475
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 FGYAKHYG 9
FG A+ YG
Sbjct: 468 FGLAREYG 475
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 4 YAKHY 8
YAKHY
Sbjct: 176 YAKHY 180
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 4 YAKHY 8
YAKHY
Sbjct: 178 YAKHY 182
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 4 YAKHY 8
YA+HY
Sbjct: 256 YARHY 260
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 4 YAKHY 8
YA+HY
Sbjct: 257 YARHY 261
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 4 YAKHY 8
YA+HY
Sbjct: 256 YARHY 260
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 4 YAKHY 8
YA+HY
Sbjct: 257 YARHY 261
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 4 YAKHY 8
YA+HY
Sbjct: 257 YARHY 261
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 4 YAKHY 8
YA+HY
Sbjct: 257 YARHY 261
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 SFGYAKHYGL 10
SFG K+Y +
Sbjct: 258 SFGQEKYYDM 267
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 SFGYAKHYGL 10
SFG K+Y +
Sbjct: 258 SFGQEKYYDM 267
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 5 AKHYGL 10
A+HYG+
Sbjct: 232 ARHYGV 237
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 5 AKHYGL 10
A+HYG+
Sbjct: 232 ARHYGV 237
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 5 AKHYGL 10
A+HYG+
Sbjct: 232 ARHYGV 237
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 5 AKHYGL 10
A+HYG+
Sbjct: 232 ARHYGV 237
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 3 GYAKHYG 9
G AK+YG
Sbjct: 91 GIAKYYG 97
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 3 GYAKHYG 9
G AK+YG
Sbjct: 91 GIAKYYG 97
>sp|VE4_HPV63|PROTEIN E4|Human papillomavirus type 63
Query: 5 AKHYGL 10
A HYGL
Sbjct: 5 APHYGL 10
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 YAKHYGL 10
Y KH+G+
Sbjct: 239 YCKHWGV 245
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 YAKHYGL 10
Y KH+G+
Sbjct: 239 YCKHWGV 245
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 YAKHYGL 10
Y KH+G+
Sbjct: 239 YCKHWGV 245
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 YAKHYGL 10
Y KH+G+
Sbjct: 239 YCKHWGV 245
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 YAKHYGL 10
Y KH+G+
Sbjct: 239 YCKHWGV 245
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 4 YAKHYGL 10
Y KH+G+
Sbjct: 239 YCKHWGV 245
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 YAKHYGL 10
Y KH+G+
Sbjct: 239 YCKHWGV 245
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 SFGYAKH 7
SFG KH
Sbjct: 79 SFGKCKH 85
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SFGYAKH 7
SFG KH
Sbjct: 78 SFGKCKH 84
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 1 SFGYAKHYG 9
S GY++H G
Sbjct: 361 SNGYSEHNG 369
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 KHYGL 10
KHYG+
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 KHYGL 10
KHYG+
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 KHYGL 10
KHYG+
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 KHYGL 10
KHYG+
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 KHYGL 10
KHYG+
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 KHYGL 10
KHYG+
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 KHYGL 10
KHYG+
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 KHYGL 10
KHYG+
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 6 KHYGL 10
KHYG+
Sbjct: 1249 KHYGV 1253
6|SequenceR|35|26|QDKPASFGYA
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 QDKPASFGYA 10
+D P FGYA
Sbjct: 423 RDPPNVFGYA 432
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 4 PASFGY 9
PA+FGY
Sbjct: 1418 PAAFGY 1423
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 PASFGY 9
PA+FGY
Sbjct: 1490 PAAFGY 1495
Query: 1 QDKPASFGYA 10
+ KP FG A
Sbjct: 2988 EKKPGEFGKA 2997
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 PASFGY 9
PA+FGY
Sbjct: 1490 PAAFGY 1495
Query: 1 QDKPASFGYA 10
+ KP FG A
Sbjct: 2988 EKKPGEFGKA 2997
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 PASFGY 9
PA+FGY
Sbjct: 1490 PAAFGY 1495
Query: 1 QDKPASFGYA 10
+ KP FG A
Sbjct: 2988 EKKPGEFGKA 2997
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 PASFGY 9
PA+FGY
Sbjct: 1490 PAAFGY 1495
Query: 1 QDKPASFGYA 10
+ KP FG A
Sbjct: 2988 EKKPGEFGKA 2997
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QDKPASFGYA 10
+D+P S GY
Sbjct: 399 EDRPVSRGYG 408
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 QDKPASFGYA 10
+ KP+ FG A
Sbjct: 2948 EKKPSEFGRA 2957
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 QDKPASFGYA 10
+ KP+ FG A
Sbjct: 2959 EKKPSEFGKA 2968
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 4 PASFGY 9
PASF Y
Sbjct: 324 PASFNY 329
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 QDKPASFGYA 10
+ KP FG A
Sbjct: 2989 EKKPGEFGKA 2998
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 QDKPASFGYA 10
+ KP FG A
Sbjct: 2986 EKKPGEFGKA 2995
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 QDKPASFGYA 10
+ KP FG A
Sbjct: 2990 EKKPGEFGKA 2999
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 QDKPASFGYA 10
+ KP FG A
Sbjct: 2989 EKKPGEFGKA 2998
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 QDKPASFG 8
Q KP FG
Sbjct: 956 QGKPLEFG 963
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 QDKPASFG 8
Q KP FG
Sbjct: 956 QGKPLEFG 963
7|SequenceR|40|31|ATVVQQDKPA
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 VVQQDKPA 10
++QQ KP+
Sbjct: 3272 MIQQSKPS 3279
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 5 QQDKPA 10
QDKPA
Sbjct: 148 HQDKPA 153
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 TVVQQDK 8
TVV+QD+
Sbjct: 1051 TVVRQDR 1057
8|SequenceR|45|36|EQYEVATVVQ
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 EQYEVATVVQ 10
E+YE++ +VQ
Sbjct: 373 EEYELSFIVQ 382
9|SequenceR|50|41|CALIAEQYEV
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 3 LIAEQYE 9
+IA+QYE
Sbjct: 21 IIADQYE 27
>sp|US10_VZVD|VIRION protein US10 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 CALIAEQYE 9
CA+ E YE
Sbjct: 44 CAISTEAYE 52
10|SequenceR|55|46|KKPTKCALIA
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KKPTKCALI 9
K P CALI
Sbjct: 10 KPPRSCALI 18
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 3 PTKCALIA 10
P+KC LI+
Sbjct: 461 PSKCILIS 468
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 KPTKCALI 9
K KCAL+
Sbjct: 1800 KENKCALV 1807
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 KPTKCALI 9
K KCAL+
Sbjct: 1800 KENKCALV 1807
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 KPTKCALI 9
K KCAL+
Sbjct: 1800 KENKCALV 1807
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 KPTKCALI 9
K KCAL+
Sbjct: 1800 KENKCALV 1807
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 KPTKCALI 9
K KCAL+
Sbjct: 1800 KENKCALV 1807
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 KPTKCALI 9
K KCAL+
Sbjct: 1800 KENKCALV 1807
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 1 KKPTKCAL 8
K+P +CA+
Sbjct: 247 KRPRQCAV 254
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PTKCAL 8
PT CAL
Sbjct: 69 PTVCAL 74
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 1 KKPTKCAL 8
K+P +C L
Sbjct: 249 KRPRQCGL 256
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 KPTKCALI 9
KP KC L+
Sbjct: 814 KPMKCWLV 821
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 2 KPTKCAL 8
+PT CAL
Sbjct: 264 EPTGCAL 270
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 2 KPTKCAL 8
+PT CAL
Sbjct: 264 EPTGCAL 270
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKPTKC 6
+KP KC
Sbjct: 390 RKPIKC 395
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 KPTKCAL 8
KP KCA+
Sbjct: 1139 KPGKCAV 1145
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 KPTKCAL 8
KP KCA+
Sbjct: 1139 KPGKCAV 1145
11|SequenceR|60|51|RSSVTKKPTK
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 3 SVTKKPTK 10
S+TK+P K
Sbjct: 51 SITKRPNK 58
12|SequenceR|65|56|KKWELRSSVT
***** No hits found ******
13|SequenceR|70|61|VSRGLKKWEL
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 3 RGLKKWEL 10
RGL KW
Sbjct: 145 RGLNKWSF 152
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 VSRGLKKWEL 10
++RGLKK +L
Sbjct: 337 LNRGLKKSQL 346
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 VSRGLKKWEL 10
++RGLKK +L
Sbjct: 337 LNRGLKKSQL 346
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 VSRGLKKWEL 10
VS+G K W++
Sbjct: 389 VSKGSKVWKI 398
>sp|PG005_VACCC|PROTEIN OPG005|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 LKKWEL 10
LKKW+L
Sbjct: 12 LKKWKL 17
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 VSRGLKKWEL 10
+ +G K W++
Sbjct: 668 IGKGFKTWKV 677
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 VSRGLKKW 8
+S+GLKK+
Sbjct: 257 LSQGLKKY 264
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 3 RGLKKWEL 10
+GLK W++
Sbjct: 458 KGLKFWDV 465
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VSRGLKKWE 9
VSR + WE
Sbjct: 319 VSREIAAWE 327
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VSRGLKKWE 9
VSR + WE
Sbjct: 313 VSREIAAWE 321
14|SequenceR|75|66|YYVFSVSRGL
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 1 YYVFSVSRGL 10
+Y F++SRGL
Sbjct: 269 WYAFALSRGL 278
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 1 YYVFSVSRGL 10
+Y F++SRGL
Sbjct: 269 WYAFALSRGL 278
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 1 YYVFSVSRGL 10
+Y F++SRG
Sbjct: 269 WYAFALSRGF 278
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 1 YYVFSVSRGL 10
+Y F++SRG
Sbjct: 269 WYAFALSRGF 278
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 1 YYVFSVSRGL 10
+Y F++SRG
Sbjct: 269 WYAFALSRGF 278
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 1 YYVFSVSRGL 10
+Y F++SRG
Sbjct: 269 WYAFALSRGF 278
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 1 YYVFSVSRGL 10
+Y F++SRG
Sbjct: 268 WYAFALSRGF 277
>sp|HEMA_I86A0|HEMAGGLUTININ A virus (strain A/Taiwan/1/1986
Query: 1 YYVFSVSRGL 10
+Y F++SRG
Sbjct: 269 WYAFALSRGF 278
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 YYVFSVSRG 9
+Y F++SRG
Sbjct: 269 WYAFALSRG 277
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 1 YYVFSVSRGL 10
+Y F++SRG
Sbjct: 269 WYAFALSRGF 278
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 1 YYVFSVSRGL 10
+Y F++SRG
Sbjct: 269 WYAFALSRGF 278
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 1 YYVFSVSRGL 10
+Y F++SRG
Sbjct: 269 WYAFALSRGF 278
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 1 YYVFSVSRGL 10
+Y F++SRG
Sbjct: 269 WYAFALSRGF 278
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 YYVFSVSRGL 10
+Y F++SRG
Sbjct: 268 WYAFALSRGF 277
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 1 YYVFSVSRGL 10
+Y F++SRG
Sbjct: 268 WYAFALSRGF 277
>sp|US8A_HHV2H|PROTEIN US8.5|Human herpesvirus 2 (strain HG52)
Query: 1 YYVFSVSRG 9
+YV S++RG
Sbjct: 137 FYVTSIARG 145
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 2 YVFSVSRGL 10
Y F++SRG
Sbjct: 269 YAFALSRGF 277
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 YVFSVSRGL 10
Y F++SRG
Sbjct: 269 YAFALSRGF 277
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 2 YVFSVSRGL 10
Y F++SRG
Sbjct: 269 YAFALSRGF 277
>sp|US8A_HHV11|PROTEIN US8.5|Human herpesvirus 1 (strain 17)
Query: 1 YYVFSVSRG 9
+YV S++RG
Sbjct: 150 WYVTSIARG 158
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YYVFSVSRGL 10
+Y F+VS+G
Sbjct: 4788 FYDFAVSKGF 4797
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 YYVFSV 6
YYVF+V
Sbjct: 489 YYVFTV 494
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 YVFSVSR 8
Y+F VSR
Sbjct: 649 YIFDVSR 655
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 YVFSVSR 8
Y+F VSR
Sbjct: 649 YIFDVSR 655
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 YVFSVSR 8
Y+F VSR
Sbjct: 649 YIFDVSR 655
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YYVFSVSRGL 10
+Y F+VS+G
Sbjct: 4811 FYDFAVSKGF 4820
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 1 YYVFSVSRG 9
+Y F+++RG
Sbjct: 269 WYAFALNRG 277
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YYVFSVSRGL 10
YY F V RG+
Sbjct: 250 YYCFRVLRGV 259
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YYVFSVSRGL 10
YY F V RG+
Sbjct: 250 YYCFRVLRGV 259
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 FSVSRGL 10
FSV RG+
Sbjct: 161 FSVKRGI 167
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 FSVSRGL 10
FSV RG+
Sbjct: 161 FSVKRGI 167
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YYVFSVSRGL 10
Y+V +++RG+
Sbjct: 253 YFVETLARGI 262
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 2 YVFSVSRG 9
Y F+++RG
Sbjct: 270 YAFALNRG 277
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 2 YVFSVSRG 9
Y F+++RG
Sbjct: 270 YAFAMNRG 277
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 YVFSVSRG 9
Y F+++RG
Sbjct: 270 YAFAMNRG 277
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 YVFSVSRG 9
Y F+++RG
Sbjct: 270 YAFAMNRG 277
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 YYVFSVSRGL 10
YY V RGL
Sbjct: 140 YYASHVFRGL 149
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YYVFSVSRGL 10
YY V RGL
Sbjct: 140 YYASHVFRGL 149
15|SequenceR|80|71|QLTQQYYVFS
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 TQQYYVFS 10
T+ YYVF+
Sbjct: 486 TEDYYVFT 493
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 LTQQYY 7
LTQQY+
Sbjct: 626 LTQQYH 631
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 LTQQYY 7
LTQQY+
Sbjct: 626 LTQQYH 631
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 LTQQYY 7
LTQQY+
Sbjct: 626 LTQQYH 631
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 3 TQQYYVF 9
T+Q+YV+
Sbjct: 364 TKQFYVY 370
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 QQYYVF 9
QYYVF
Sbjct: 85 NQYYVF 90
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 QQYYVF 9
QYYVF
Sbjct: 85 NQYYVF 90
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 QQYYVF 9
QYYVF
Sbjct: 86 NQYYVF 91
16|SequenceR|85|76|NKFDGQLTQQ
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 NKFDGQL 7
N+FDG L
Sbjct: 18 NQFDGAL 24
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain
Query: 1 NKFDGQL 7
N+FDG L
Sbjct: 18 NQFDGAL 24
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 2 KFDGQLTQ 9
KF QLTQ
Sbjct: 481 KFSAQLTQ 488
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 NKFDGQLTQQ 10
N+FD + TQQ
Sbjct: 90 NRFDIRDTQQ 99
17|SequenceR|90|81|IMEARNKFDG
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 4 ARNKFDG 10
+RN+FDG
Sbjct: 16 SRNQFDG 22
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain
Query: 4 ARNKFDG 10
+RN+FDG
Sbjct: 16 SRNQFDG 22
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 1 IMEARNKFDG 10
I + +NKF+G
Sbjct: 24 IPDVQNKFEG 33
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 MEARNKFDG 10
+ A+N+F+G
Sbjct: 522 LAAQNRFEG 530
18|SequenceR|95|86|RINFDIMEAR
>sp|ORF9B_SARS|ORF9B protein|Severe acute respiratory syndrome coronavirus
Query: 1 RINFDIMEAR 10
R N D +EAR
Sbjct: 59 RRNLDSLEAR 68
>sp|VIL6_HHV8P|VIRAL interleukin-6 homolog|Human herpesvirus 8 type P
Query: 2 INFDIME 8
IN D+ME
Sbjct: 120 INVDVME 126
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 INFDIMEAR 10
I+ DI+EAR
Sbjct: 25 ISADILEAR 33
19|SequenceR|100|91|TVNKIRINFD
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 3 NKIRINFD 10
NK+ INFD
Sbjct: 245 NKVVINFD 252
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 3 NKIRINFD 10
NK+ +NFD
Sbjct: 245 NKVVVNFD 252
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 3 NKIRINFD 10
NK+ +NFD
Sbjct: 245 NKVVVNFD 252
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 3 NKIRINFD 10
NK+ +NFD
Sbjct: 245 NKVVVNFD 252
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 VNKIRINF 9
VNK +NF
Sbjct: 830 VNKTNVNF 837
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 TVNKIRINF 9
T+N IR+ F
Sbjct: 490 TLNCIRVRF 498
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 VNKIRINFD 10
VN++RI ++
Sbjct: 1927 VNELRIEYE 1935
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 VNKIRINFD 10
VN++RI ++
Sbjct: 1927 VNELRIEYE 1935
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 VNKIRINFD 10
+NK +NF+
Sbjct: 828 MNKANVNFE 836
20|SequenceR|105|96|GADSRTVNKI
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ADSRTVNKI 10
++SR VNKI
Sbjct: 1122 SESRIVNKI 1130
>sp|NSP3_ROTH3|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 ADSRTVNKI 10
ADSRTV K+
Sbjct: 89 ADSRTVAKL 97
21|SequenceR|110|101|ECRYKGADSR
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 2 CRYKGADSR 10
C++K +DS+
Sbjct: 133 CQWKDSDSK 141
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 2 CRYKGADSR 10
C++K +DS+
Sbjct: 32 CQWKDSDSK 40
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 CRYKG 6
C+YKG
Sbjct: 1057 CKYKG 1061
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 CRYKG 6
CRY+G
Sbjct: 139 CRYRG 143
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 CRYKG 6
CRY+G
Sbjct: 1418 CRYEG 1422
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 CRYKGADS 9
C Y GA+S
Sbjct: 153 CPYAGANS 160
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 CRYKGADS 9
C Y GAD+
Sbjct: 924 CSYCGADA 931
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 2 CRYKGADS 9
C Y GA+S
Sbjct: 153 CPYAGANS 160
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 CRYKGADS 9
C Y GA+S
Sbjct: 153 CPYAGANS 160
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 2 CRYKGADS 9
C Y GA+S
Sbjct: 153 CPYAGANS 160
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 CRYKGA 7
CRY G+
Sbjct: 139 CRYHGS 144
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CRYKG 6
CR+KG
Sbjct: 330 CRFKG 334
>sp|PG030_MONPV|PROTEIN OPG030|Monkeypox virus (MPXV)
Query: 2 CRYKGADS 9
C+Y G D+
Sbjct: 75 CKYIGKDN 82
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CRYKG 6
CRY+G
Sbjct: 214 CRYRG 218
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CRYKG 6
CRY+G
Sbjct: 214 CRYRG 218
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 CRYKG 6
CRY+G
Sbjct: 141 CRYEG 145
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 CRYKG 6
CRY+G
Sbjct: 141 CRYEG 145
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 CRYKG 6
CRY+G
Sbjct: 141 CRYEG 145
>sp|PG030_VACCC|PROTEIN OPG030|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CRYKGADS 9
C+Y G D+
Sbjct: 71 CKYIGKDN 78
22|SequenceR|115|106|SPASVECRYK
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 1 SPASVECRY 9
+P +V CRY
Sbjct: 327 TPNTVYCRY 335
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SPASVECRYK 10
+ A + CRYK
Sbjct: 100 TSAFISCRYK 109
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SPASVECRYK 10
+ A + CRYK
Sbjct: 100 TSAFISCRYK 109
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 SPASVECRY 9
SP+S C Y
Sbjct: 1478 SPSSASCEY 1486
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 SPASVECRY 9
SP++ EC Y
Sbjct: 70 SPSAEECGY 78
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 4 SVECRYK 10
S++C+YK
Sbjct: 501 SLDCKYK 507
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 4 SVECRYK 10
S++C+YK
Sbjct: 501 SLDCKYK 507
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 SPASVECRY 9
SP++ EC Y
Sbjct: 70 SPSAEECGY 78
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 SPASVECRY 9
SP++ EC Y
Sbjct: 70 SPSAEECGY 78
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 SPASVECRY 9
SP++ EC Y
Sbjct: 70 SPSAEECGY 78
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 SPASVECRY 9
SP++ EC Y
Sbjct: 70 SPSAEECGY 78
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 5 VECRY 9
VECRY
Sbjct: 376 VECRY 380
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 4 SVECRYK 10
S++C+YK
Sbjct: 500 SLDCKYK 506
>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9
Query: 1 SPASVECR 8
SP S++CR
Sbjct: 118 SPGSLQCR 125
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 SPASVECRY 9
SP+S +C++
Sbjct: 1417 SPSSPDCKF 1425
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 VECRYK 10
++CRYK
Sbjct: 279 IKCRYK 284
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 4 SVECRYK 10
S++C+YK
Sbjct: 501 SLDCKYK 507
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate
Query: 1 SPASVECR 8
+PA +CR
Sbjct: 7 APAGAKCR 14
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 SPASVECRY 9
SP+S +C++
Sbjct: 1414 SPSSPDCKF 1422
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 SPASVECRY 9
SP + EC Y
Sbjct: 70 SPTAEECGY 78
>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 ASVECRYK 10
S+E RYK
Sbjct: 85 VSIEWRYK 92
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 VECRYK 10
++CRYK
Sbjct: 279 IKCRYK 284
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 SPASVECRY 9
SP++ EC Y
Sbjct: 70 SPSAEECGY 78
>sp|US9_HHV11|ENVELOPE protein US9|Human herpesvirus 1 (strain 17)
Query: 1 SPASVECRYK 10
SP SVE Y
Sbjct: 25 SPVSVEAYYS 34
23|SequenceR|120|111|NQGQESPASV
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 QGQESPASV 10
+ QESPA+V
Sbjct: 26 ETQESPATV 34
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 2 QGQESPASV 10
+ QESPA+V
Sbjct: 26 ETQESPATV 34
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 QGQESPAS 9
+GQE+PA+
Sbjct: 349 EGQETPAA 356
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 QGQESPAS 9
+GQE+PA+
Sbjct: 349 EGQETPAA 356
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 NQGQESPAS 9
N G+E+P S
Sbjct: 280 NNGRETPGS 288
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 NQGQESPAS 9
NQGQE+ S
Sbjct: 548 NQGQETSIS 556
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 QGQESPA 8
+G ESPA
Sbjct: 193 RGSESPA 199
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 QGQESPA 8
QGQ+SP
Sbjct: 700 QGQDSPV 706
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 QGQESPASV 10
+GQE+P ++
Sbjct: 59 EGQENPQAL 67
24|SequenceR|125|116|TDEELNQGQE
>sp|VP22_HHV2H|TEGUMENT protein VP22|Human herpesvirus 2 (strain HG52)
Query: 1 TDEELNQ 7
TDE+LN+
Sbjct: 228 TDEDLNE 234
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 TDEELNQGQ 9
T EEL +GQ
Sbjct: 1048 TVEELKRGQ 1056
>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)
Query: 1 TDEELNQ 7
TDE+LN+
Sbjct: 228 TDEDLNE 234
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 1 TDEELN 6
TDE+LN
Sbjct: 226 TDEKLN 231
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 EELNQGQ 9
EE+N+G+
Sbjct: 155 EEINEGE 161
25|SequenceR|130|121|VELTVTDEEL
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VELTVTDEEL 10
VEL +D+EL
Sbjct: 381 VELESSDDEL 390
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VELTVTDEEL 10
VEL +D+EL
Sbjct: 381 VELESSDDEL 390
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VELTVTDEEL 10
VEL +D+EL
Sbjct: 381 VELESSDDEL 390
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 1 VELTVTDE 8
VELTVT +
Sbjct: 123 VELTVTGQ 130
>sp|LHDAG_HDVTW|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 3 LTVTDEE 9
LTV DEE
Sbjct: 133 LTVEDEE 139
>sp|NP1_HBOC4|NON-STRUCTURAL protein NP-1|Human bocavirus 4 (HBoV4) (Human
Query: 5 VTDEEL 10
VTDEE+
Sbjct: 196 VTDEEM 201
>sp|NP1_HBOC2|NON-STRUCTURAL protein NP-1|Human bocavirus 2 (HBoV2) (Human
Query: 5 VTDEEL 10
VTDEE+
Sbjct: 196 VTDEEM 201
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 VELTVTDE 8
VELT+T+E
Sbjct: 115 VELTLTNE 122
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ELTVTD 7
E+TVTD
Sbjct: 142 EMTVTD 147
>sp|SHDAG_HDVTW|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 3 LTVTDEE 9
LTV DEE
Sbjct: 133 LTVEDEE 139
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 ELTVTDEEL 10
ELTV+D L
Sbjct: 1291 ELTVSDSVL 1299
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 ELTVTDEEL 10
ELTV+D L
Sbjct: 1291 ELTVSDSVL 1299
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related coronavirus
Query: 3 LTVTDEEL 10
L +TDE+L
Sbjct: 100 LNLTDEDL 107
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 VELTVTDE 8
+ELT+T+E
Sbjct: 115 LELTLTNE 122
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 VELTVTDE 8
+ELT+T+E
Sbjct: 115 LELTLTNE 122
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 VELTVTD 7
VEL VTD
Sbjct: 990 VELIVTD 996
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 2 ELTVTDEE 9
+LTV DEE
Sbjct: 227 DLTVEDEE 234
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 VELTVTD 7
VEL VTD
Sbjct: 990 VELLVTD 996
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 VELTVTD 7
VEL VTD
Sbjct: 990 VELLVTD 996
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 VELTVTD 7
VEL VTD
Sbjct: 990 VELLVTD 996
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 2 ELTVTDEE 9
+LTV DEE
Sbjct: 227 DLTVEDEE 234
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 2 ELTVTDEE 9
+LTV DEE
Sbjct: 227 DLTVEDEE 234
26|SequenceR|135|126|APAVLVELTV
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 1 APAVLVELTV 10
AP +L+ LTV
Sbjct: 249 APGMLICLTV 258
27|SequenceR|140|131|ECSPVAPAVL
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 1 ECSPVAP 7
EC P AP
Sbjct: 120 ECLPAAP 126
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 1 ECSPVAP 7
EC P AP
Sbjct: 120 ECLPAAP 126
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 ECSPVAP 7
EC P AP
Sbjct: 120 ECLPAAP 126
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 ECSPVAP 7
EC P AP
Sbjct: 120 ECLPAAP 126
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 ECSPVAP 7
EC P AP
Sbjct: 120 ECLPAAP 126
>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 ECSPVAP 7
EC P AP
Sbjct: 120 ECLPAAP 126
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 ECSPVAP 7
EC P AP
Sbjct: 120 ECLPAAP 126
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 ECSPVAP 7
EC P AP
Sbjct: 120 ECLPAAP 126
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 ECSPVAP 7
EC P AP
Sbjct: 120 ECLPAAP 126
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 ECSPVAP 7
EC P AP
Sbjct: 120 ECLPAAP 126
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 CSPVAP 7
C PVAP
Sbjct: 570 CVPVAP 575
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 CSPVAP 7
C PVAP
Sbjct: 570 CVPVAP 575
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 CSPVAP 7
C PVAP
Sbjct: 558 CVPVAP 563
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 2 CSPVAP 7
C PV+P
Sbjct: 335 CGPVSP 340
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 2 CSPVAP 7
C PV+P
Sbjct: 335 CGPVSP 340
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 CSPVAP 7
C PV+P
Sbjct: 335 CGPVSP 340
>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe
Query: 1 ECSPVAPAVL 10
E PV PAV+
Sbjct: 124 EYLPVGPAVM 133
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 2 CSPVAP 7
C PV+P
Sbjct: 335 CGPVSP 340
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 CSPVAP 7
C PV+P
Sbjct: 335 CGPVSP 340
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 2 CSPVAP 7
C PV+P
Sbjct: 315 CGPVSP 320
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 2 CSPVAP 7
C PV+P
Sbjct: 315 CGPVSP 320
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 CSPVAP 7
C PV+P
Sbjct: 315 CGPVSP 320
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 CSPVAP 7
C PV+P
Sbjct: 315 CGPVSP 320
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 CSPVAP 7
C PV+P
Sbjct: 315 CGPVSP 320
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 CSPVAPAVL 10
CS ++PA +
Sbjct: 425 CSQISPAAI 433
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 2 CSPVAP 7
C PV+P
Sbjct: 307 CGPVSP 312
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 SPVAPA 8
+PVAPA
Sbjct: 422 TPVAPA 427
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 3 SPVAPA 8
+PVAPA
Sbjct: 422 TPVAPA 427
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 SPVAPA 8
+PVAPA
Sbjct: 422 TPVAPA 427
28|SequenceR|145|136|ASSPVECSPV
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 SSPVECSPV 10
S + CSPV
Sbjct: 459 SGQISCSPV 467
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 ASSPVECSPV 10
A +P EC P+
Sbjct: 178 APAPTECPPL 187
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 1 ASSPVECSPV 10
S + CSPV
Sbjct: 458 GSGQISCSPV 467
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 2 SSPVECSPV 10
S + CSPV
Sbjct: 459 SGQISCSPV 467
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 2 SSPVECSPV 10
S + CSPV
Sbjct: 459 SGQISCSPV 467
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 SSPVECSPV 10
S + CSPV
Sbjct: 459 SGQISCSPV 467
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 SSPVECSPV 10
S PVEC V
Sbjct: 1958 SQPVECYKV 1966
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 3 SPVECS 8
SP++CS
Sbjct: 95 SPIQCS 100
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 3 SPVECSP 9
SP CSP
Sbjct: 44 SPEHCSP 50
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 3 SPVECSP 9
SP CSP
Sbjct: 73 SPEHCSP 79
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 5 VECSPV 10
V+C+PV
Sbjct: 546 VDCAPV 551
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 VECSPV 10
V+C+PV
Sbjct: 546 VDCAPV 551
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 SSPVECSPV 10
S P+E +PV
Sbjct: 565 SGPIEQNPV 573
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 SSPVECSPV 10
S P+E +PV
Sbjct: 565 SGPIEQNPV 573
29|SequenceR|150|141|VTGSLASSPV
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 VTGSLASSP 9
VTG L S+P
Sbjct: 793 VTGELKSNP 801
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 1 VTGSLASSPV 10
+ GSL+ +PV
Sbjct: 252 IAGSLSGNPV 261
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 VTGSLASSPV 10
VTGS+ ++P+
Sbjct: 41 VTGSVETTPI 50
30|SequenceR|155|146|CRLEVVTGSL
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 EVVTGSL 10
EVVTGS+
Sbjct: 1153 EVVTGSM 1159
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 CRLEVV 6
CRLE++
Sbjct: 903 CRLEII 908
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 CRLEVV 6
CRLE++
Sbjct: 903 CRLEII 908
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 CRLEVV 6
CRLE++
Sbjct: 903 CRLEII 908
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CRLEVVTGS 9
CRL +GS
Sbjct: 645 CRLATASGS 653
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CRLEVVTGS 9
CRL +GS
Sbjct: 645 CRLATASGS 653
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 RLEVVTG 8
RLE++TG
Sbjct: 275 RLELLTG 281
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 RLEVVTG 8
RLE++TG
Sbjct: 275 RLELLTG 281
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RLEVVTG 8
RLE++TG
Sbjct: 275 RLELLTG 281
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 RLEVVTG 8
RLE++TG
Sbjct: 275 RLELLTG 281
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 RLEVVTG 8
RLE++TG
Sbjct: 275 RLELLTG 281
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 CRLEVVTGS 9
C EV+TG+
Sbjct: 1637 CIPEVITGA 1645
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 CRLEVVT 7
C++E++T
Sbjct: 1917 CQVEIIT 1923
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 LEVVTGS 9
LEV+TG+
Sbjct: 345 LEVITGA 351
31|SequenceR|160|151|GEKDQCRLEV
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 DQCRLE 9
D+CRLE
Sbjct: 654 DRCRLE 659
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 DQCRLE 9
D+CRLE
Sbjct: 654 DRCRLE 659
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 4 DQCRLE 9
D+CRLE
Sbjct: 654 DRCRLE 659
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 GEKDQCRL 8
G KDQC++
Sbjct: 1078 GTKDQCQI 1085
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 GEKDQCRL 8
G KDQC++
Sbjct: 1078 GTKDQCQI 1085
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 5 QCRLEV 10
+CRLE+
Sbjct: 902 RCRLEI 907
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 5 QCRLEV 10
+CRLE+
Sbjct: 902 RCRLEI 907
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 5 QCRLEV 10
+CRLE+
Sbjct: 902 RCRLEI 907
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 EKDQCR 7
+K+QCR
Sbjct: 556 KKEQCR 561
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 EKDQCR 7
+K+QCR
Sbjct: 556 KKEQCR 561
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 EKDQCR 7
+K+QCR
Sbjct: 555 KKEQCR 560
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 EKDQCR 7
+K+QCR
Sbjct: 556 KKEQCR 561
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 EKDQCR 7
+K+QCR
Sbjct: 556 KKEQCR 561
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 GEKDQCR 7
G+K+ CR
Sbjct: 749 GKKENCR 755
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 GEKDQCR 7
G+K+ CR
Sbjct: 749 GKKENCR 755
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 EKDQC 6
+KDQC
Sbjct: 498 DKDQC 502
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 EKDQC 6
+KDQC
Sbjct: 498 DKDQC 502
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 EKDQC 6
+KDQC
Sbjct: 498 DKDQC 502
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 GEKDQCRL 8
GE+D C L
Sbjct: 185 GEEDHCLL 192
>sp|MC007_MCV1|PROTEIN MC007|Molluscum contagiosum virus subtype 1
Query: 1 GEKDQCRL 8
E+DQC L
Sbjct: 94 AERDQCVL 101
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 EKDQC 6
+KDQC
Sbjct: 498 DKDQC 502
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 EKDQC 6
+KDQC
Sbjct: 498 DKDQC 502
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 EKDQC 6
+KDQC
Sbjct: 498 DKDQC 502
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 KDQCRLE 9
KDQC L+
Sbjct: 996 KDQCGLD 1002
32|SequenceR|165|156|EPAPNGEKDQ
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 PAPNGEKDQ 10
P+ NG KDQ
Sbjct: 1074 PSENGTKDQ 1082
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 PAPNGEKDQ 10
P+ NG KDQ
Sbjct: 1074 PSENGTKDQ 1082
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 PAPNGEKDQ 10
PAP GE DQ
Sbjct: 566 PAPEGEPDQ 574
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 2 PAPNGEKDQ 10
PAP GE DQ
Sbjct: 565 PAPEGEPDQ 573
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 PAPNGE 7
PAPNG+
Sbjct: 660 PAPNGK 665
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PAPNGEKD 9
P+P GE D
Sbjct: 2385 PSPGGESD 2392
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 1 EPAPNGEKD 9
+P PNG D
Sbjct: 132 QPPPNGHTD 140
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 EPAPNGEKDQ 10
+P PNG D+
Sbjct: 626 DPIPNGPPDR 635
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 EPAPNG 6
EPAP+G
Sbjct: 2370 EPAPSG 2375
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 EPAPNG 6
EPAP+G
Sbjct: 2370 EPAPSG 2375
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 EPAPNG 6
EPAP+G
Sbjct: 2370 EPAPSG 2375
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 2 PAPNGEKD 9
PAP G D
Sbjct: 4 PAPRGSPD 11
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPAPNGEKDQ 10
EP+ N E+D+
Sbjct: 259 EPSLNEEQDK 268
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPAPNGEKDQ 10
EP+ N E+D+
Sbjct: 128 EPSLNEEQDK 137
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 EPAPNG 6
EPAP G
Sbjct: 1674 EPAPAG 1679
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 APNGEK 8
APNG+K
Sbjct: 290 APNGKK 295
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 EPAPNGEKDQ 10
EP+ N E+D+
Sbjct: 79 EPSLNEEQDK 88
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 EPAPNGEKDQ 10
EP+ N E+D+
Sbjct: 79 EPSLNEEQDK 88
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 4 PNGEKDQ 10
PN EK+Q
Sbjct: 195 PNDEKEQ 201
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPAPNGEKDQ 10
EP+ N E+D+
Sbjct: 359 EPSLNEEQDK 368
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPAPNGEKDQ 10
EP+ N E+D+
Sbjct: 359 EPSLNEEQDK 368
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 PAPNGEK 8
PAP G K
Sbjct: 460 PAPTGHK 466
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPAPNGEKDQ 10
EP+ N E+D+
Sbjct: 359 EPSLNEEQDK 368
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPAPNGEKDQ 10
EP+ N E+D+
Sbjct: 359 EPSLNEEQDK 368
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 EPAPNGEKDQ 10
EP+ N E+D+
Sbjct: 359 EPSLNEEQDK 368
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EPAPNGEKDQ 10
EP+ N E+D+
Sbjct: 359 EPSLNEEQDK 368
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 2 PAPNGEKD 9
P P G+K+
Sbjct: 57 PLPGGDKE 64
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 2 PAPNGEKD 9
P P G+K+
Sbjct: 57 PLPGGDKE 64
33|SequenceR|170|161|KFWTYEPAPN
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 2 FWTYEPAP 9
+W Y P P
Sbjct: 371 YWQYSPVP 378
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FWTYEPAP 9
+W Y P P
Sbjct: 371 YWQYSPVP 378
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 FWTYEPAPN 10
FW Y+P N
Sbjct: 1907 FWVYQPLLN 1915
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 FWTYEPAPN 10
FW Y+P N
Sbjct: 1907 FWVYQPLLN 1915
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 KFWTYEPAP 9
KFW P P
Sbjct: 1306 KFWKSSPEP 1314
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 KFWTYEPAP 9
KFW P P
Sbjct: 1307 KFWRSSPEP 1315
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 YEPAPN 10
YEPAP+
Sbjct: 448 YEPAPS 453
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 YEPAPN 10
YEPAP+
Sbjct: 448 YEPAPS 453
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 KFWTYEPAPN 10
+FW E AP
Sbjct: 671 RFWAQETAPG 680
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 KFWTYEPA 8
+ W Y PA
Sbjct: 547 RHWLYSPA 554
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 KFWTYEPAPN 10
+FW E AP
Sbjct: 671 RFWAQETAPG 680
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 KFWTYEPAPN 10
+FW E AP
Sbjct: 670 RFWAQETAPG 679
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 KFWTYEPAPN 10
+FW E AP
Sbjct: 671 RFWAQETAPG 680
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 KFWTYEPAPN 10
K W+++ PN
Sbjct: 4326 KHWSFDYHPN 4335
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 KFWTYEPAPN 10
+FW E AP
Sbjct: 671 RFWAQETAPG 680
>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)
Query: 5 YEPAPN 10
Y+PAPN
Sbjct: 200 YQPAPN 205
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 2 FWTYEPAPN 10
W+ P PN
Sbjct: 233 IWSISPTPN 241
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 2 FWTYEPAPN 10
W+ P PN
Sbjct: 233 IWSISPTPN 241
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 WTYEPAPN 10
W P PN
Sbjct: 1080 WDNSPGPN 1087
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 WTYEPAPN 10
W P PN
Sbjct: 1080 WDNSPGPN 1087
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 WTYEPAPN 10
W P PN
Sbjct: 1080 WDNSPGPN 1087
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 KFWTYEPAPN 10
++W+ E AP
Sbjct: 670 RYWSQETAPG 679
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 487 WHYAPKP 493
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 2 FWTYE 6
+WTY+
Sbjct: 338 YWTYQ 342
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 2 FWTYE 6
+WTY+
Sbjct: 338 YWTYQ 342
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FWTYE 6
+WTY+
Sbjct: 338 YWTYQ 342
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 489 WHYPPKP 495
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 487 WHYPPKP 493
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 TYEPAP 9
+YEP P
Sbjct: 358 SYEPTP 363
>sp|PG170_VAR67|PROTEIN OPG170|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 WTYEP 7
WT EP
Sbjct: 104 WTMEP 108
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 487 WHYPPKP 493
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 487 WHYAPRP 493
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 487 WHYAPRP 493
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 487 WHYAPRP 493
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 487 WHYAPRP 493
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 488 WHYAPRP 494
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 487 WHYAPRP 493
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 489 WHYPPKP 495
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 487 WHYAPRP 493
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 488 WHYAPRP 494
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 488 WHYAPRP 494
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 489 WHYPPRP 495
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 487 WHYPPRP 493
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 488 WHYAPRP 494
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 489 WHYPPKP 495
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 488 WHYAPRP 494
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 487 WHYAPRP 493
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 489 WHYPPRP 495
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 WTYEPAP 9
W Y P P
Sbjct: 488 WHYAPRP 494
34|SequenceR|175|166|LRIGDKFWTY
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GDKFWTY 10
GD FW Y
Sbjct: 2233 GDTFWRY 2239
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GDKFWTY 10
GD FW Y
Sbjct: 2233 GDTFWRY 2239
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 1 LRIGDKFWTY 10
L IG++ W+Y
Sbjct: 310 LEIGNEQWSY 319
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 1 LRIGDKFWTY 10
L IG++ W+Y
Sbjct: 310 LEIGNEQWSY 319
>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain
Query: 1 LRIGDKFWTY 10
L IG++ W+Y
Sbjct: 310 LEIGNEQWSY 319
>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)
Query: 2 RIGDKFWT 9
+IGDKF T
Sbjct: 83 KIGDKFQT 90
>sp|SPI2A_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)
Query: 2 RIGDKFWT 9
+IGDKF T
Sbjct: 73 KIGDKFQT 80
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 IGDKFWTY 10
IG+K W Y
Sbjct: 551 IGNKKWVY 558
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 LRIGDKF 7
++IGDKF
Sbjct: 367 VKIGDKF 373
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 LRIGDKFW 8
LRI + FW
Sbjct: 1489 LRIDNTFW 1496
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 5 DKFWTY 10
D FW Y
Sbjct: 1644 DNFWVY 1649
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 1 LRIGDKFWTY 10
L IG++ W Y
Sbjct: 310 LEIGNEQWRY 319
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 1 LRIGDKFWTY 10
L IG++ W Y
Sbjct: 310 LEIGNEQWRY 319
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 1 LRIGDKFWTY 10
L IG++ W Y
Sbjct: 310 LEIGNEQWRY 319
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 DKFWTY 10
D FW Y
Sbjct: 1644 DSFWVY 1649
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 DKFWTY 10
D FW Y
Sbjct: 1644 DSFWVY 1649
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 5 DKFWTY 10
D FW Y
Sbjct: 1644 DSFWVY 1649
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin)
Query: 4 GDKFWTY 10
GDK W +
Sbjct: 35 GDKLWLH 41
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169)
Query: 4 GDKFWTY 10
GDK W +
Sbjct: 35 GDKLWLH 41
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 3 IGDKFWTY 10
+ D+FW Y
Sbjct: 110 VSDEFWLY 117
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 3 IGDKFWTY 10
+GD+ W Y
Sbjct: 581 LGDERWKY 588
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 5 DKFWTY 10
DK W Y
Sbjct: 88 DKMWIY 93
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 3 IGDKFWT 9
I DK WT
Sbjct: 549 ISDKSWT 555
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GDKFWTY 10
GD+ W Y
Sbjct: 225 GDRQWLY 231
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GDKFWTY 10
GD+ W Y
Sbjct: 225 GDRQWLY 231
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GDKFWTY 10
GD+ W Y
Sbjct: 224 GDRQWLY 230
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 4 GDKFWTY 10
GD W Y
Sbjct: 241 GDSMWFY 247
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 4 GDKFWTY 10
GD W Y
Sbjct: 250 GDSMWFY 256
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 4 GDKFWTY 10
GD W Y
Sbjct: 277 GDSMWFY 283
>sp|SPI2_VARV|SERINE proteinase inhibitor 2|Variola virus
Query: 2 RIGDKFWT 9
+IGD F T
Sbjct: 83 KIGDNFQT 90
>sp|SPI2_VAR67|SERINE proteinase inhibitor 2|Variola virus (isolate
Query: 2 RIGDKFWT 9
+IGD F T
Sbjct: 83 KIGDNFQT 90
>sp|SPI2_CWPXB|SERINE proteinase inhibitor 2|Cowpox virus (strain Brighton Red)
Query: 2 RIGDKFWT 9
+IGD F T
Sbjct: 80 KIGDNFQT 87
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 4 GDKFWTY 10
GD W Y
Sbjct: 242 GDSMWFY 248
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 4 GDKFWTY 10
GD W Y
Sbjct: 266 GDSMWFY 272
>sp|SH_HRSV|SMALL hydrophobic protein|Human respiratory syncytial virus
Query: 1 LRIGDKFWTY 10
+ KFW Y
Sbjct: 8 IEFSSKFWPY 17
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 GDKFWTY 10
GD++W +
Sbjct: 744 GDRYWPW 750
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 DKFWT 9
D+FWT
Sbjct: 180 DEFWT 184
>sp|SH_HRSVB|SMALL hydrophobic protein|Human respiratory syncytial virus B
Query: 6 KFWTY 10
KFW Y
Sbjct: 13 KFWPY 17
>sp|SH_HRSVA|SMALL hydrophobic protein|Human respiratory syncytial virus A
Query: 1 LRIGDKFWTY 10
+ KFW Y
Sbjct: 8 IEFSSKFWPY 17
>sp|SH_HRSS2|SMALL hydrophobic protein|Human respiratory syncytial virus A
Query: 1 LRIGDKFWTY 10
+ KFW Y
Sbjct: 8 IEFSSKFWPY 17
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 RIGDKFW 8
RI DK W
Sbjct: 1831 RIPDKAW 1837
35|SequenceR|180|171|RPNELLRIGD
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RPNELLRIGD 10
RPN+ + +GD
Sbjct: 250 RPNQPIPVGD 259
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 RPNELLRIGD 10
RP E +RI D
Sbjct: 2068 RPEESIRIDD 2077
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RPNELLRIGD 10
RPN+ + +GD
Sbjct: 250 RPNQPIPVGD 259
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 3 NELLRIGD 10
NELLR+ D
Sbjct: 1031 NELLRVTD 1038
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 4 ELLRIG 9
ELLRIG
Sbjct: 20 ELLRIG 25
>sp|VE8E2_HPV31|PROTEIN E8^E2C|Human papillomavirus 31
Query: 2 PNELLRIGD 10
PN+LLR GD
Sbjct: 70 PNKLLR-GD 77
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 2 PNELLRIGD 10
PN+LLR GD
Sbjct: 258 PNKLLR-GD 265
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 NELLRIGD 10
+EL+R GD
Sbjct: 2024 SELIRTGD 2031
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PNELLRIGD 10
PN +L IG+
Sbjct: 40 PNRILLIGE 48
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PNELLRIGD 10
PN +L IG+
Sbjct: 40 PNRILLIGE 48
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PNELLRIGD 10
PN L +GD
Sbjct: 1243 PNSLEELGD 1251
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PNELLRIGD 10
PN L +GD
Sbjct: 1244 PNSLEELGD 1252
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PNELLRIGD 10
PN L +GD
Sbjct: 1244 PNSLEELGD 1252
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 2 PNELLRIGD 10
P +LR+GD
Sbjct: 368 PVSILRMGD 376
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 PNELLRIGD 10
P +LR+GD
Sbjct: 368 PVSILRMGD 376
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 PNELLRIGD 10
P +LR+GD
Sbjct: 368 PVSILRMGD 376
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 2 PNELLRIGD 10
P +LR+GD
Sbjct: 368 PVSILRMGD 376
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 PNELLRIGD 10
P +LR+GD
Sbjct: 368 PVSILRMGD 376
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 2 PNELLRIGD 10
P +LR+GD
Sbjct: 368 PVSILRMGD 376
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 PNELLRIG 9
P EL R+G
Sbjct: 2904 PTELNRVG 2911
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 PNELLRIG 9
P EL R+G
Sbjct: 2907 PTELNRVG 2914
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 PNELLRIG 9
P EL R+G
Sbjct: 2907 PTELNRVG 2914
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 PNELLRIG 9
P EL R+G
Sbjct: 2910 PGELNRVG 2917
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 PNELLRIGD 10
P LLRIG+
Sbjct: 146 PLRLLRIGN 154
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 PNELLRIGD 10
P LLRIG+
Sbjct: 146 PLRLLRIGN 154
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 PNELLRIGD 10
P LLRIG+
Sbjct: 146 PLRLLRIGN 154
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 4 ELLRIGD 10
EL+R GD
Sbjct: 737 ELMRTGD 743
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 ELLRIGD 10
EL+R GD
Sbjct: 744 ELMRTGD 750
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 4 ELLRIGD 10
EL+R GD
Sbjct: 737 ELMRTGD 743
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 ELLRIGD 10
EL+R GD
Sbjct: 737 ELMRTGD 743
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 4 ELLRIGD 10
EL+R GD
Sbjct: 747 ELMRTGD 753
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 4 ELLRIGD 10
EL+R GD
Sbjct: 753 ELMRTGD 759
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 4 ELLRIGD 10
EL+R GD
Sbjct: 749 ELMRTGD 755
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 4 ELLRIGD 10
EL+R GD
Sbjct: 747 ELMRTGD 753
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PNELLRIGD 10
P E R GD
Sbjct: 459 PEESFRFGD 467
36|SequenceR|185|176|SQSGLRPNEL
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 3 SGLRPNE 9
SGLRP E
Sbjct: 157 SGLRPQE 163
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 3 SGLRPNE 9
SGLRP E
Sbjct: 157 SGLRPQE 163
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 3 SGLRPNE 9
+GLRP E
Sbjct: 613 AGLRPGE 619
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 3 SGLRPNE 9
+GLRP E
Sbjct: 613 AGLRPGE 619
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 3 SGLRPNE 9
+GLRP E
Sbjct: 613 AGLRPGE 619
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 2 QSGLRP 7
Q+GLRP
Sbjct: 498 QAGLRP 503
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 3 SGLRPNEL 10
+GLRP E
Sbjct: 265 TGLRPGEF 272
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 SGLRPNE 9
SGL+P E
Sbjct: 1945 SGLQPTE 1951
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 QSGLRPNEL 10
+SG PNE
Sbjct: 304 RSGTHPNEF 312
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 QSGLRPN 8
QSGL+P+
Sbjct: 926 QSGLQPS 932
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 QSGLRPN 8
QSGL+P+
Sbjct: 926 QSGLQPS 932
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 4 GLRPNE 9
GLRP E
Sbjct: 539 GLRPKE 544
37|SequenceR|190|181|YSSNTSQSGL
***** No hits found ******
38|SequenceR|195|186|KTNMTYSSNT
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 1 KTNMTYSSNT 10
+TN+ Y +NT
Sbjct: 31 RTNIYYHANT 40
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 KTNMTYSSNT 10
+TN+ Y +NT
Sbjct: 31 RTNIYYHANT 40
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 KTNMTYSSNT 10
+TN+ Y +NT
Sbjct: 31 RTNIYYHANT 40
>sp|PG077_MONPZ|TELOMERE-BINDING protein OPG077|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 3 NMTYSSNT 10
N+T SSNT
Sbjct: 304 NITISSNT 311
>sp|PG077_MONPV|TELOMERE-BINDING protein OPG077|Monkeypox virus (MPXV)
Query: 3 NMTYSSNT 10
N+T SSNT
Sbjct: 304 NITISSNT 311
>sp|E3145_ADE05|EARLY E3 14.5 kDa protein|Human adenovirus C serotype 5
Query: 1 KTNMTYSSNT 10
+ +TY SNT
Sbjct: 54 QAKVTYDSNT 63
>sp|PG065_MONPV|RNA-BINDING protein OPG065|Monkeypox virus (MPXV)
Query: 1 KTNMTYSSN 9
++ M YSSN
Sbjct: 15 RSAMVYSSN 23
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TNMTYSSNT 10
TN TY+SN+
Sbjct: 403 TNDTYNSNS 411
39|SequenceR|200|191|QLTGTKTNMT
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 3 TGTKTNM 9
+GTKTN+
Sbjct: 55 SGTKTNI 61
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 TKTNMT 10
TKTN+T
Sbjct: 2962 TKTNLT 2967
40|SequenceR|205|196|SVTNFQLTGT
>sp|VE7_HPV57|PROTEIN E7|Human papillomavirus 57
Query: 3 TNFQLT 8
TN+QLT
Sbjct: 37 TNYQLT 42
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 3 TNFQLTG 9
+NF LTG
Sbjct: 150 SNFSLTG 156
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 3 TNFQLTG 9
+NF LTG
Sbjct: 150 SNFSLTG 156
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TNFQLTG 9
+NF LTG
Sbjct: 150 SNFSLTG 156
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 SVTNFQLTGT 10
S T+F++ GT
Sbjct: 559 SPTHFRMVGT 568
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 SVTNFQLTGT 10
S T+F++ GT
Sbjct: 559 SPTHFRMVGT 568
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 SVTNFQLTGT 10
S T+F++ GT
Sbjct: 557 SPTHFRMVGT 566
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 SVTNFQLTGT 10
S T+F++ GT
Sbjct: 559 SPTHFRMVGT 568
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 SVTNFQLTGT 10
S T+F++ GT
Sbjct: 559 SPTHFRMVGT 568
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 3 TNFQLTG 9
T+F LTG
Sbjct: 529 THFDLTG 535
41|SequenceR|210|201|GTDLKSVTNF
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 GTDLKSVTN 9
GTDL ++TN
Sbjct: 567 GTDLVNITN 575
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GTDLKSVTNF 10
G LKS+T+F
Sbjct: 393 GQGLKSLTSF 402
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TDLKSVTN 9
TDL++ TN
Sbjct: 137 TDLRNTTN 144
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TDLKSVTN 9
TDL++ TN
Sbjct: 131 TDLRNATN 138
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 GTDLKSVTN 9
GTD ++TN
Sbjct: 567 GTDQANITN 575
42|SequenceR|215|206|ECSYEGTDLK
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 2 CSYEGTDL 9
C+Y GTD+
Sbjct: 198 CTYHGTDI 205
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 CSYEGTDL 9
C+Y GTD+
Sbjct: 198 CTYHGTDV 205
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 SYEGTDL 9
SYEG+D+
Sbjct: 501 SYEGSDV 507
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ECSYEGTD 8
+ YEGTD
Sbjct: 603 QVKYEGTD 610
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ECSYEGTD 8
+ YEGTD
Sbjct: 603 QVKYEGTD 610
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ECSYEGTD 8
+ YEGTD
Sbjct: 603 QVKYEGTD 610
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ECSYEGTDL 9
+CSY+G L
Sbjct: 254 DCSYQGGGL 262
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 CSYEGTDLK 10
CSYE D++
Sbjct: 349 CSYESFDVE 357
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ECSYEGTD 8
+ YEGTD
Sbjct: 603 QVKYEGTD 610
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ECSYEGTD 8
+ YEGTD
Sbjct: 603 QVKYEGTD 610
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 2 CSYEGT 7
CS++GT
Sbjct: 322 CSFQGT 327
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 2 CSYEGT 7
CS++GT
Sbjct: 322 CSFQGT 327
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 2 CSYEGT 7
CS++GT
Sbjct: 322 CSFQGT 327
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 ECSYEGTD 8
E SY G+D
Sbjct: 547 ELSYSGSD 554
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 ECSYEGTD 8
E SY G+D
Sbjct: 619 ELSYSGSD 626
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 ECSYEGTD 8
E SY G+D
Sbjct: 619 ELSYSGSD 626
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 ECSYEGTD 8
E SY G+D
Sbjct: 619 ELSYSGSD 626
>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe
Query: 1 ECSYEGTD 8
E +YEG D
Sbjct: 27 ELAYEGLD 34
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 SYEGTDL 9
+YEG+D+
Sbjct: 501 AYEGSDV 507
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 SYEGTDL 9
+YEG+D+
Sbjct: 501 AYEGSDV 507
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 SYEGTDL 9
+YEG+D+
Sbjct: 501 AYEGSDV 507
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 SYEGTDL 9
+YEG+D+
Sbjct: 501 AYEGSDV 507
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 SYEGTDL 9
+YEG+D+
Sbjct: 501 AYEGSDV 507
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 2 CSYEGT 7
CSY GT
Sbjct: 153 CSYSGT 158
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 ECSYEGTD 8
E SY G+D
Sbjct: 619 ELSYSGSD 626
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 ECSYEGTD 8
E SY G+D
Sbjct: 619 ELSYSGSD 626
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 ECSYEGTD 8
E SY G+D
Sbjct: 619 ELSYSGSD 626
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 2 CSYEGTD 8
C+Y G D
Sbjct: 461 CTYSGLD 467
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 SYEGTDLK 10
S+EG D K
Sbjct: 2522 SFEGYDFK 2529
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 SYEGTD 8
SYEG D
Sbjct: 111 SYEGKD 116
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 CSYEGTD 8
CSY G D
Sbjct: 924 CSYCGAD 930
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 3 SYEGTD 8
SYEG D
Sbjct: 119 SYEGKD 124
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 3 SYEGTD 8
SYEG D
Sbjct: 119 SYEGKD 124
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 SYEGTD 8
SYEG D
Sbjct: 119 SYEGKD 124
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SYEGTD 8
SYEG D
Sbjct: 119 SYEGKD 124
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 4 YEGTDL 9
YE TDL
Sbjct: 1960 YEATDL 1965
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 ECSYEGTD 8
+C+ GTD
Sbjct: 263 QCASRGTD 270
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 3 SYEGTD 8
SYEG D
Sbjct: 119 SYEGKD 124
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 3 SYEGTD 8
SYEG D
Sbjct: 119 SYEGKD 124
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 3 SYEGTD 8
SYEG D
Sbjct: 119 SYEGKD 124
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 3 SYEGTD 8
SYEG D
Sbjct: 119 SYEGKD 124
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 SYEGTDLK 10
S+EG D K
Sbjct: 2522 SFEGYDFK 2529
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 SYEGTDLK 10
+Y+G D+K
Sbjct: 843 NYKGNDIK 850
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 SYEGTDLK 10
+Y+G D+K
Sbjct: 843 NYKGNDIK 850
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CSYEGTD 8
C Y TD
Sbjct: 327 CKYNATD 333
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SYEGTDLK 10
++ GTD+K
Sbjct: 388 TWNGTDIK 395
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ECSYEG 6
+C+Y+G
Sbjct: 76 DCAYDG 81
43|SequenceR|220|211|VSNRAECSYE
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 3 NRAECSY 9
+RAECS+
Sbjct: 500 SRAECSF 506
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NRAECS 8
N+AECS
Sbjct: 368 NKAECS 373
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NRAECS 8
N+AECS
Sbjct: 368 NKAECS 373
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 SNRAECSYE 10
S A CSY+
Sbjct: 259 SKSASCSYQ 267
>sp|M21_HMPVC|PROTEIN M2-1|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 VSNRAECSYE 10
+S +A C YE
Sbjct: 1 MSRKAPCKYE 10
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 NRAECS 8
N+AEC+
Sbjct: 346 NKAECA 351
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VSNRAECSYE 10
VS ++CSY+
Sbjct: 249 VSGFSDCSYQ 258
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 NRAECS 8
N+AEC+
Sbjct: 346 NKAECA 351
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 NRAECS 8
N+AEC+
Sbjct: 346 NKAECA 351
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 SNRAEC 7
SNRA C
Sbjct: 6148 SNRATC 6153
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 SNRAEC 7
SNRA C
Sbjct: 6198 SNRATC 6203
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 NRAECS 8
N+AEC+
Sbjct: 346 NKAECA 351
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 6 ECSYE 10
EC+YE
Sbjct: 745 ECTYE 749
44|SequenceR|225|216|CRRYGVSNRA
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRYGV 6
C+ YGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRYGV 6
C+ YGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRYGV 6
C+ YGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRYGV 6
C+ YGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRYGV 6
C+ YGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRYGV 6
C+ YGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRYGV 6
C+ YGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRYGV 6
C+ YGV
Sbjct: 1248 CKHYGV 1253
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRRYGV 6
C+ YGV
Sbjct: 1248 CKHYGV 1253
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CRRYG 5
CR YG
Sbjct: 67 CRHYG 71
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CRRYG 5
CR YG
Sbjct: 67 CRHYG 71
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CRRYG 5
CR YG
Sbjct: 67 CRHYG 71
45|SequenceR|230|221|MRKGPCRRYG
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 GPCRRYG 10
GPCRR G
Sbjct: 408 GPCRRLG 414
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 2 RKGPCRRYG 10
R+ P RRYG
Sbjct: 146 RRDPTRRYG 154
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 KGPCR 7
KGPCR
Sbjct: 237 KGPCR 241
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 4 GPCRR 8
GPCRR
Sbjct: 417 GPCRR 421
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 4 GPCRR 8
GPCRR
Sbjct: 417 GPCRR 421
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 1 MRKGPCRRY 9
+R GPC Y
Sbjct: 311 IRSGPCALY 319
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 4 GPCRR 8
GPCRR
Sbjct: 417 GPCRR 421
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RKGPCRRY 9
R GP RRY
Sbjct: 446 RYGPVRRY 453
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RKGPCRRY 9
R GP RRY
Sbjct: 446 RYGPVRRY 453
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 4 GPCRRYG 10
GPC YG
Sbjct: 339 GPCDEYG 345
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 1 MRKGPCRRY 9
M +G CR Y
Sbjct: 77 MDEGKCRTY 85
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 1 MRKGPCRRY 9
M +G CR Y
Sbjct: 77 MDEGKCRTY 85
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 MRKGPCRRYG 10
M + CR YG
Sbjct: 62 MLRAYCRHYG 71
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 MRKGPCRRYG 10
M + CR YG
Sbjct: 62 MLRAYCRHYG 71
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 MRKGPCRRYG 10
M + CR YG
Sbjct: 62 MLRAYCRHYG 71
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 RKGPCR 7
R GPCR
Sbjct: 783 RLGPCR 788
>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 3 KGPCR 7
KGPCR
Sbjct: 211 KGPCR 215
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 RKGPCRRYG 10
RKG + YG
Sbjct: 849 RKGDIKSYG 857
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 GPCR 7
GPCR
Sbjct: 621 GPCR 624
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 GPCR 7
GPCR
Sbjct: 622 GPCR 625
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 GPCR 7
GPCR
Sbjct: 619 GPCR 622
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RKGPC 6
R+GPC
Sbjct: 536 RRGPC 540
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 PCRRY 9
PC RY
Sbjct: 473 PCNRY 477
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 GPCR 7
GPCR
Sbjct: 620 GPCR 623
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 GPCR 7
GPCR
Sbjct: 282 GPCR 285
>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 GPCR 7
GPCR
Sbjct: 282 GPCR 285
>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 GPCR 7
GPCR
Sbjct: 282 GPCR 285
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 4 GPCR 7
GPCR
Sbjct: 292 GPCR 295
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 PCRRY 9
PC RY
Sbjct: 472 PCNRY 476
>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 GPCR 7
GPCR
Sbjct: 282 GPCR 285
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 4 GPCR 7
GPCR
Sbjct: 282 GPCR 285
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 GPCR 7
GPCR
Sbjct: 293 GPCR 296
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RKGPC 6
R+GPC
Sbjct: 536 RRGPC 540
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 4 GPCR 7
GPCR
Sbjct: 292 GPCR 295
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 5 PCRRY 9
PC RY
Sbjct: 471 PCNRY 475
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 4 GPCR 7
GPCR
Sbjct: 292 GPCR 295
>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 GPCR 7
GPCR
Sbjct: 293 GPCR 296
>sp|HBSAG_HBVCJ|LARGE envelope protein|Hepatitis B virus genotype C
Query: 4 GPCR 7
GPCR
Sbjct: 293 GPCR 296
46|SequenceR|235|226|LDDVQMRKGP
>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DVQMRK 8
DVQMR+
Sbjct: 225 DVQMRR 230
>sp|VP30_EBOZM|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 DDVQMRKGP 10
DD Q +GP
Sbjct: 132 DDFQQEEGP 140
>sp|VP30_EBOZ5|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 DDVQMRKGP 10
DD Q +GP
Sbjct: 132 DDFQQEEGP 140
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 LDDVQM 6
+DDVQM
Sbjct: 1595 VDDVQM 1600
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LDDVQM 6
LDDV+M
Sbjct: 1914 LDDVEM 1919
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LDDVQM 6
LDDV+M
Sbjct: 1934 LDDVEM 1939
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LDDVQM 6
LDDV+M
Sbjct: 1964 LDDVEM 1969
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LDDVQM 6
LDDV+M
Sbjct: 1914 LDDVEM 1919
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LDDVQM 6
LDDV+M
Sbjct: 1934 LDDVEM 1939
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LDDVQM 6
LDDV+M
Sbjct: 1964 LDDVEM 1969
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 LDDVQM 6
LDDVQ+
Sbjct: 1595 LDDVQL 1600
47|SequenceR|240|231|IGSINLDDVQ
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 5 NLDDVQ 10
NLDD+Q
Sbjct: 49 NLDDIQ 54
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 5 NLDDVQ 10
NLDD+Q
Sbjct: 49 NLDDIQ 54
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 3 SINLDD 8
SINLDD
Sbjct: 1131 SINLDD 1136
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 IGSINLD 7
IG++NLD
Sbjct: 1604 IGAVNLD 1610
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GSINLDD 8
G +NLDD
Sbjct: 43 GGLNLDD 49
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GSINLDD 8
G +NLDD
Sbjct: 43 GGLNLDD 49
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 INLDDVQ 10
+NLDD Q
Sbjct: 247 LNLDDAQ 253
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 INLDDVQ 10
+NLDD Q
Sbjct: 247 LNLDDAQ 253
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 INLDDVQ 10
+NLDD Q
Sbjct: 247 LNLDDAQ 253
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 1 IGSINLDDV 9
+GSI D+V
Sbjct: 364 LGSIQFDEV 372
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 4 INLDDVQ 10
+NLDDV+
Sbjct: 399 MNLDDVE 405
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 3 SINLDDVQ 10
S NL+D+Q
Sbjct: 461 SFNLNDLQ 468
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 3 SINLDDVQ 10
S NL+D+Q
Sbjct: 461 SFNLNDLQ 468
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 3 SINLDD 8
+INLDD
Sbjct: 110 TINLDD 115
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 4 INLDDVQ 10
IN+DD++
Sbjct: 192 INIDDIK 198
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 4 INLDDVQ 10
IN+DD++
Sbjct: 194 INIDDIK 200
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 3 SINLDD 8
+INLDD
Sbjct: 110 TINLDD 115
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 2 GSINLDD 8
G+I LDD
Sbjct: 335 GAIKLDD 341
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 2 GSINLDD 8
G+I LDD
Sbjct: 336 GAIKLDD 342
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 4 INLDDVQ 10
+N+DDV+
Sbjct: 435 LNMDDVK 441
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 NLDDVQ 10
NL+DVQ
Sbjct: 476 NLEDVQ 481
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 NLDDVQ 10
NL+DVQ
Sbjct: 476 NLEDVQ 481
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GSINLDDV 9
GS++ DD+
Sbjct: 255 GSLDTDDI 262
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 4 INLDDVQ 10
IN+DD++
Sbjct: 195 INIDDIK 201
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 4 INLDDVQ 10
IN+DD++
Sbjct: 195 INIDDIK 201
48|SequenceR|245|236|VVAAIIGSIN
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VVAAIIGSIN 10
VVA ++G +N
Sbjct: 237 VVAIVLGGVN 246
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VVAAIIGSIN 10
VVA ++G +N
Sbjct: 237 VVAIVLGGVN 246
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VVAAIIGSIN 10
VVA ++G +N
Sbjct: 236 VVAIVLGGVN 245
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VVAAIIGSIN 10
VVA ++G +N
Sbjct: 236 VVAIVLGGVN 245
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VVAAIIGSIN 10
VVA ++G +N
Sbjct: 237 VVAIVLGGVN 246
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VVAAIIGSIN 10
VVA ++G +N
Sbjct: 237 VVAIVLGGVN 246
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 VVAAIIGSIN 10
VVA ++G +N
Sbjct: 223 VVAIVLGGVN 232
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 VVAAIIGSIN 10
VVA ++G +N
Sbjct: 222 VVAIVLGGVN 231
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VVAAIIGSIN 10
VVA IIG I+
Sbjct: 562 VVAVIIGVIS 571
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 VAAIIGS 8
VAA++GS
Sbjct: 65 VAAVVGS 71
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 2 VAAIIGSI 9
+AA++G+I
Sbjct: 398 IAALVGAI 405
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 2 VAAIIGSI 9
+AA++G+I
Sbjct: 397 IAALVGAI 404
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 VVAAIIGSI 9
+ A+IGS+
Sbjct: 1834 ITGAVIGSV 1842
49|SequenceR|250|241|VLAVVVVAAI
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 LAVVVVAAI 10
+ VVV+AAI
Sbjct: 816 IGVVVIAAI 824
50|SequenceR|255|246|GCVSIVLAVV
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 1 GCVSIVLAVV 10
GC+ +VLAVV
Sbjct: 540 GCLPVVLAVV 549
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GCVSIV 6
GCVSI+
Sbjct: 1682 GCVSII 1687
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 GCVSIV 6
GCVSI+
Sbjct: 1682 GCVSII 1687
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 GCVSIV 6
GC+SIV
Sbjct: 3485 GCLSIV 3490
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 2 CVSIVLAV 9
CV IVL+V
Sbjct: 11 CVIIVLSV 18
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 CVSIVLAVV 10
CVSIV + V
Sbjct: 526 CVSIVPSTV 534
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GCVSIV 6
GC+SI+
Sbjct: 1682 GCISII 1687
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GCVSIV 6
GC+SI+
Sbjct: 1682 GCISII 1687
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GCVSIVLA 8
GCV VLA
Sbjct: 151 GCVGGVLA 158
51|SequenceR|260|251|YCVGLGCVSI
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 YCVGLGCVSI 10
YC+ GCVSI
Sbjct: 1677 YCLATGCVSI 1686
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 YCVGLGCVSI 10
YC+ GCVSI
Sbjct: 1677 YCLATGCVSI 1686
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 YCVGLGCVSI 10
YC+ GC+SI
Sbjct: 1677 YCLATGCISI 1686
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 YCVGLGCVSI 10
YC+ GC+SI
Sbjct: 1677 YCLATGCISI 1686
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 YCVGLGCVSI 10
YC+ +GCV I
Sbjct: 1681 YCLSVGCVVI 1690
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 YCVGLGCVSI 10
YC+ +GCV I
Sbjct: 1679 YCLSVGCVVI 1688
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 YCVGLGCVSI 10
YC+ +GCV I
Sbjct: 1674 YCLSVGCVVI 1683
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 YCVGLGCVSI 10
YC+ +GCV I
Sbjct: 1679 YCLSVGCVVI 1688
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 YCVGLGCVSI 10
YC+ +GCV I
Sbjct: 1677 YCLSVGCVVI 1686
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 YCVGLGCVSI 10
YC+ +GCV I
Sbjct: 1678 YCLSVGCVVI 1687
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 YCVGLGCVSI 10
YC+ GCV I
Sbjct: 1677 YCLATGCVCI 1686
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 YCVGLGCVSI 10
YC+ +GCV +
Sbjct: 1675 YCLSVGCVVV 1684
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 YCVGLGCVSI 10
YC+ +GCV I
Sbjct: 1678 YCLTVGCVVI 1687
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 YCVGLGCVSI 10
YC+ GCV I
Sbjct: 1673 YCLSTGCVVI 1682
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 YCVGLGCVSI 10
YC+ GCV I
Sbjct: 1673 YCLSTGCVVI 1682
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 YCVGLGCVSI 10
YC+ GCV I
Sbjct: 1673 YCLSTGCVVI 1682
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 YCVGLGCV 8
YC+ GCV
Sbjct: 1677 YCLATGCV 1684
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 YCVGLGCVSI 10
YC+ GC +I
Sbjct: 888 YCLSPGCTTI 897
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 3 VGLGCV 8
+GLGCV
Sbjct: 45 LGLGCV 50
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 YCVGLGC 7
YCV GC
Sbjct: 880 YCVSAGC 886
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 YCVGLGCVSI 10
+ +GL C+SI
Sbjct: 1135 FSLGLLCISI 1144
Query: 2 CVGLG 6
CVG+G
Sbjct: 283 CVGIG 287
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 YCVGLGCVSI 10
+ +GL C+SI
Sbjct: 1134 FSLGLLCISI 1143
Query: 2 CVGLG 6
CVG+G
Sbjct: 283 CVGIG 287
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 YCVGLGCVSI 10
YC+ GC ++
Sbjct: 888 YCLSPGCTTV 897
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVGLGCVSI 10
CV L C S+
Sbjct: 122 CVTLDCSSV 130
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVGLGCVSI 10
CV L C ++
Sbjct: 125 CVTLNCTNV 133
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVGLGCVSI 10
CV L C ++
Sbjct: 122 CVTLNCTNV 130
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVGLGCVSI 10
CV + CV +
Sbjct: 127 CVQMNCVDL 135
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVGLGCV 8
CV L C+
Sbjct: 125 CVTLNCI 131
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVGLGCV 8
CV L C+
Sbjct: 125 CVTLNCI 131
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVGLGCV 8
CV L C+
Sbjct: 125 CVTLNCI 131
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 YCVGLGCVSI 10
+C G G VS+
Sbjct: 1630 HCAGGGGVSV 1639
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVGLGCV 8
CV L C+
Sbjct: 125 CVTLNCI 131
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 CVGLGCVSI 10
CV L C+ +
Sbjct: 125 CVTLNCIDV 133
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVGLGCVSI 10
CV L C +
Sbjct: 127 CVTLNCTDV 135
>sp|UL10_HCMVM|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CVGLG 6
CVG+G
Sbjct: 63 CVGIG 67
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 CVGLG 6
CVG+G
Sbjct: 283 CVGIG 287
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVGLGCVSI 10
CV L C ++
Sbjct: 125 CVTLNCTNL 133
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVGLGCVSI 10
CV L C ++
Sbjct: 125 CVTLNCTNL 133
52|SequenceR|265|256|GKRQAYCVGL
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 RQAYCVGL 10
RQA+C GL
Sbjct: 1715 RQAFCAGL 1722
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 4 QAYCVG 9
QAYCVG
Sbjct: 1243 QAYCVG 1248
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 QAYCVG 9
QAYC+G
Sbjct: 1247 QAYCIG 1252
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 QAYCVG 9
+AYCVG
Sbjct: 1243 EAYCVG 1248
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 1 GKRQAYC 7
GKR+ YC
Sbjct: 317 GKRKLYC 323
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RQAYC 7
RQAYC
Sbjct: 338 RQAYC 342
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RQAYC 7
RQAYC
Sbjct: 315 RQAYC 319
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RQAYC 7
RQAYC
Sbjct: 313 RQAYC 317
>sp|VE8E2_HPV28|PROTEIN E8^E2C|Human papillomavirus 28
Query: 1 GKRQAYC 7
GKR+ YC
Sbjct: 117 GKRKLYC 123
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 QAYCVG 9
+AYC+G
Sbjct: 1244 EAYCIG 1249
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 4 QAYCVGL 10
+AYC G+
Sbjct: 1233 EAYCTGM 1239
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 RQAYC 7
R+AYC
Sbjct: 535 REAYC 539
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 GKRQAYC 7
GK QA C
Sbjct: 388 GKNQALC 394
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 GKRQAYCVGL 10
GK YC L
Sbjct: 143 GKHMGYCAEL 152
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 AYCVGL 10
++CVGL
Sbjct: 2150 SFCVGL 2155
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 AYCVGL 10
++CVGL
Sbjct: 2150 SFCVGL 2155
53|SequenceR|270|261|EKSFYGKRQA
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 KSFYGKR 8
++FYG+R
Sbjct: 7 QTFYGRR 13
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 KSFYGKR 8
++FYG+R
Sbjct: 7 QTFYGRR 13
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 KSFYGKR 8
++FYG+R
Sbjct: 7 QTFYGRR 13
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 KSFYGKR 8
++FYG+R
Sbjct: 7 QTFYGRR 13
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 KSFYGKR 8
++FYG+R
Sbjct: 7 QTFYGRR 13
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 4 FYGKRQA 10
FYG R+A
Sbjct: 241 FYGNRRA 247
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 2 KSFYG 6
KSFYG
Sbjct: 654 KSFYG 658
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 2 KSFYG 6
KSFYG
Sbjct: 658 KSFYG 662
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KSFYG 6
KSFYG
Sbjct: 658 KSFYG 662
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 4 FYGKRQ 9
FYG+R+
Sbjct: 249 FYGRRE 254
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 4 FYGKRQ 9
F+GKR+
Sbjct: 245 FFGKRE 250
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 4 FYGKRQ 9
F+GKR+
Sbjct: 250 FFGKRE 255
54|SequenceR|275|266|KQFSTEKSFY
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 1 KQFSTEKSFY 10
++F+T+ S+Y
Sbjct: 347 QRFTTDDSYY 356
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 TEKSFY 10
TE+SFY
Sbjct: 5369 TEESFY 5374
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 TEKSFY 10
TE+SFY
Sbjct: 5319 TEESFY 5324
55|SequenceR|280|271|SSSNSKQFST
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 2 SSNSKQFST 10
+SN+K+F+T
Sbjct: 552 ASNTKRFAT 560
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 3 SNSKQFS 9
SN+K+FS
Sbjct: 548 SNTKRFS 554
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 SSSNSK 6
SSSNSK
Sbjct: 658 SSSNSK 663
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 3 SNSKQFST 10
SNS +FST
Sbjct: 294 SNSDRFST 301
56|SequenceR|285|276|MTTAKSSSNS
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 MTTAKSSSNS 10
+TTAKS++N+
Sbjct: 390 LTTAKSTNNT 399
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 1 MTTAKSSSNS 10
+TTAK SN+
Sbjct: 51 VTTAKEQSNN 60
57|SequenceR|290|281|FDNESMTTAK
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 FDNESMTT 8
+DNES+ T
Sbjct: 98 YDNESLNT 105
>sp|PG005_MONPV|PROTEIN OPG005|Monkeypox virus (MPXV)
Query: 3 NESMTTAK 10
N+SM TAK
Sbjct: 94 NDSMKTAK 101
58|SequenceR|298|286|IIFSKTHKFDNES
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 IFSKTHKFDNES 13
+FS+TH+F +S
Sbjct: 647 VFSRTHEFFQKS 658
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 IFSKTHKFDNES 13
+FS+TH+F +S
Sbjct: 647 VFSRTHEFFQKS 658
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 IFSKTHKFDNES 13
+FS+TH+F +S
Sbjct: 647 VFSRTHEFFQKS 658
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 IFSKTHKFDNES 13
+FS+TH+F +S
Sbjct: 647 VFSRTHEFFQKS 658
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 IFSKTHKFDNES 13
+FS+TH+F +S
Sbjct: 647 VFSRTHEFFQKS 658
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 IFSKTHKFDNES 13
+FS+TH+F +S
Sbjct: 647 VFSRTHEFFQKS 658
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 IFSKTHKFDNES 13
+FS+TH+F +S
Sbjct: 647 VFSRTHEFFQKS 658
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 IIFSKTHK 8
IIFSK HK
Sbjct: 777 IIFSKVHK 784
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 IFSKTHKFDNES 13
+FS+TH+F +S
Sbjct: 648 VFSRTHEFFQKS 659
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 IFSKTHKFDNES 13
+FS+TH+F +S
Sbjct: 647 VFSRTHEFFQKS 658
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 IFSKTHKFDNES 13
+FS+TH+F S
Sbjct: 648 VFSRTHEFFQRS 659
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 IFSKTHKF 9
+FS+TH+F
Sbjct: 647 VFSRTHEF 654
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 IFSKTHKF 9
+FS+TH+F
Sbjct: 647 VFSRTHEF 654
>sp|PHOSP_RABVI|PHOSPHOPROTEIN virus (strain India) (RABV)
Query: 3 FSKTHKFDNES 13
FSK HKF + S
Sbjct: 209 FSKKHKFPSRS 219
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IIFSKTHKFDN 11
I+FS+ +FDN
Sbjct: 2088 IVFSRQVQFDN 2098
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IIFSKTHKFDNES 13
++FS K DN++
Sbjct: 4016 MLFSMVRKLDNQA 4028
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 5 KTHKFDN 11
KTHK DN
Sbjct: 876 KTHKVDN 882
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IIFSKTHKFDNES 13
++FS K DN++
Sbjct: 4016 MLFSMVRKLDNQA 4028
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 IIFSKTHKFDNES 13
++FS K DN++
Sbjct: 4074 MLFSMVRKLDNQA 4086
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 IIFSKTHKFDNES 13
+IFS +K D E+
Sbjct: 2022 VIFSYKYKLDMEA 2034
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 IIFSKTHKFDNES 13
++FS K DN++
Sbjct: 4054 MLFSMVRKLDNQA 4066
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 IIFSKTHKFDNES 13
++FS K DN++
Sbjct: 4104 MLFSMVRKLDNQA 4116
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 IIFSKTHKFDNES 13
++FS K DN++
Sbjct: 4074 MLFSMVRKLDNQA 4086
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 IIFSKTHKFDNES 13
++FS K DN++
Sbjct: 4054 MLFSMVRKLDNQA 4066
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 IIFSKTHKFDNES 13
++FS K DN++
Sbjct: 4104 MLFSMVRKLDNQA 4116
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 4 SKTHKFDNE 12
+K+H++ NE
Sbjct: 301 TKSHRYKNE 309
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 IIFSKTHKFDN 11
II++ + +FDN
Sbjct: 191 IIYATSVRFDN 201
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 IIFSKTHKFDN 11
II++ + +FDN
Sbjct: 191 IIYATSVRFDN 201
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 IIFSKTHKFDNE 12
IIFS+T D E
Sbjct: 364 IIFSRTSGGDAE 375
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 IIFSKTHKF 9
+IF +T KF
Sbjct: 1016 LIFDRTRKF 1024
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 IIFSKTHKF 9
+IF +T KF
Sbjct: 1016 LIFDRTRKF 1024
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 IIFSKTHKF 9
+IF +T KF
Sbjct: 1016 LIFDRTRKF 1024
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 IIFSKTHKF 9
+IF +T KF
Sbjct: 1016 LIFDRTRKF 1024
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 IIFSKTHKF 9
+IF +T KF
Sbjct: 1016 LIFDRTRKF 1024
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 SKTHKF 9
SKTHK+
Sbjct: 355 SKTHKY 360
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 SKTHKF 9
SKTHK+
Sbjct: 370 SKTHKY 375
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IIFSKTHKFDNES 13
II S+T K DN++
Sbjct: 230 IIHSRTIKTDNDT 242
>sp|PHOSP_RABVP|PHOSPHOPROTEIN virus (strain Pasteur vaccins
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 209 FSKKYKFPSRS 219
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 IIFSKTHKF 9
I+F TH F
Sbjct: 93 IVFHNTHLF 101
>sp|PHOSP_RABVM|PHOSPHOPROTEIN virus (strain PM) (RABV)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 209 FSKKYKFPSRS 219
>sp|PHOSP_RABVE|PHOSPHOPROTEIN virus (strain ERA) (RABV)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 209 FSKKYKFPSRS 219
>sp|PHOSP_RABVH|PHOSPHOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 209 FSKKYKFPSRS 219
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FSKTHKFDN 11
KTH+ DN
Sbjct: 737 MKKTHQVDN 745
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 IIFSKTHKF 9
I+F +TH F
Sbjct: 563 IVFLQTHIF 571
>sp|PHOSP_RABVS|PHOSPHOPROTEIN virus (strain SAD B19)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 209 FSKKYKFPSRS 219
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 209 FSKKYKFPSRS 219
>sp|PHOSP_RABVB|PHOSPHOPROTEIN virus (strain silver-haired bat-associated)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 209 FSKKYKFPSRS 219
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 209 FSKKYKFPSRS 219
>sp|PG114_MONPV|CORE protein OPG114|Monkeypox virus (MPXV)
Query: 2 IFSKTHKFDNES 13
I+ +FDN+S
Sbjct: 48 IYKTMARFDNKS 59
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 209 FSKKYKFPSRS 219
>sp|PHOSP_LBV|PHOSPHOPROTEIN bat virus (LBV)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 210 FSKKYKFPSRS 220
>sp|PG114_VACCC|CORE protein D2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IFSKTHKFDNES 13
I+ +FDN+S
Sbjct: 48 IYKTMARFDNKS 59
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 IFSKTHKFD 10
+F+KTH +
Sbjct: 2153 LFAKTHNLN 2161
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 IFSKTHKFD 10
+F+KTH +
Sbjct: 2153 LFAKTHNLN 2161
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 IFSKTHKFD 10
+F+KTH +
Sbjct: 2145 LFAKTHNLN 2153
>sp|PG114_VARV|CORE protein D2|Variola virus
Query: 2 IFSKTHKFDNES 13
I+ +FDN+S
Sbjct: 48 IYKTMARFDNKS 59
>sp|PG114_VAR67|CORE protein D2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 IFSKTHKFDNES 13
I+ +FDN+S
Sbjct: 48 IYKTMARFDNKS 59
>sp|PHOSP_RABVN|PHOSPHOPROTEIN virus (strain Nishigahara RCEH)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 209 FSKKYKFPSRS 219
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IIFSKTHKFDN 11
I+FS+ + DN
Sbjct: 2088 IVFSRQVQIDN 2098
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 3 FSKTHKFDNE 12
F HK DNE
Sbjct: 478 FEFYHKCDNE 487
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 IIFSKTHKFDNE 12
+ F K+ K+D E
Sbjct: 144 LTFKKSSKYDLE 155
>sp|PHOSP_ABLVB|PHOSPHOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 209 FSKKYKFPSRS 219
>sp|C22L_VACCC|TRUNCATED CrmB protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IIFSKTH 7
I+FSK H
Sbjct: 103 IVFSKDH 109
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 FSKTHKFDNE 12
F HK DNE
Sbjct: 482 FEFYHKCDNE 491
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 3 FSKTHKFDNE 12
F HK DNE
Sbjct: 482 FEFYHKCDNE 491
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 FSKTHKF 9
SK+HKF
Sbjct: 251 LSKSHKF 257
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 3 FSKTHKFDNE 12
F HK DNE
Sbjct: 482 FEFYHKCDNE 491
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 3 FSKTHKFDNE 12
F HK DNE
Sbjct: 481 FEFYHKCDNE 490
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IIFSKTHKFDN 11
I+FS+ + DN
Sbjct: 2087 IVFSRDVQIDN 2097
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IIFSKTHKFDN 11
I+FS+ + DN
Sbjct: 2087 IVFSRDVQIDN 2097
>sp|PHOSP_ABLVH|PHOSPHOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 209 FSKKYKFPSRS 219
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 IIFSKTHKFDNE 12
+ F K+ K+D E
Sbjct: 158 LAFKKSSKYDLE 169
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 IIFSKTHKFDNE 12
+ F K+ K+D E
Sbjct: 158 LAFKKSSKYDLE 169
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IIFSKTHKFDN 11
I+FS+ + DN
Sbjct: 2087 IVFSRDVQIDN 2097
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IIFSKTHKFDN 11
I+FS+ + DN
Sbjct: 2087 IVFSRDVQIDN 2097
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IIFSKTHKFDN 11
I+FS+ + DN
Sbjct: 2087 IVFSRDVQIDN 2097
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IIFSKTHKFDN 11
I+FS+ + DN
Sbjct: 1921 IVFSRDVQIDN 1931
>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)
Query: 3 FSKTHKFDNES 13
FSK +KF + S
Sbjct: 210 FSKKYKFPSRS 220
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 FSKTHKFDNE 12
F HK DNE
Sbjct: 484 FEFYHKCDNE 493
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 FSKTHKFDNE 12
F HK DNE
Sbjct: 484 FEFYHKCDNE 493
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 3 FSKTHKFDNE 12
F HK DNE
Sbjct: 484 FEFYHKCDNE 493
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 3 FSKTHKFDNE 12
F HK DNE
Sbjct: 481 FEFYHKCDNE 490
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 3 FSKTHKFDNE 12
F HK DNE
Sbjct: 484 FEFYHKCDNE 493
THE END