IF4G1_HUMAN Blast OutputR
Viruses
1|SequenceR|10|1|PGTSQPAKNM

>sp|VF369_IIV3|PROBABLE RAD2-like endonuclease 076L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 PGTSQPAK 8
PGTS P K
Sbjct: 225 PGTSTPKK 232


>sp|TEG1_GAHVM|TEGUMENT protein UL46 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 PGTSQPAKN 9
PGT +PA++
Sbjct: 132 PGTREPARS 140


>sp|RDRP_FHV|RNA-DIRECTED RNA polymerase|Flock house virus (FHV)

Query: 1 PGTSQPAKN 9
PGTS+P N
Sbjct: 908 PGTSRPHSN 916


>sp|RDRP_BBV|RNA-DIRECTED RNA polymerase|Black beetle virus (BBV)

Query: 1 PGTSQPAKN 9
PGTS+P N
Sbjct: 908 PGTSRPHSN 916


>sp|P54_ASFWA|INNER membrane protein p54|African swine fever virus (isolate

Query: 1 PGTSQPA 7
PGTS+PA
Sbjct: 86 PGTSKPA 92


>sp|P54_ASFP4|INNER membrane protein p54|African swine fever virus (isolate

Query: 1 PGTSQPA 7
PGTS+PA
Sbjct: 86 PGTSKPA 92


>sp|P54_ASFL6|INNER membrane protein p54|African swine fever virus (isolate

Query: 1 PGTSQPA 7
PGTS+PA
Sbjct: 86 PGTSKPA 92


>sp|P54_ASFB7|INNER membrane protein p54|African swine fever virus (strain

Query: 1 PGTSQPA 7
PGTS+PA
Sbjct: 86 PGTSKPA 92


>sp|CAPSD_OASV1|CAPSID polyprotein VP86|Ovine astrovirus 1 (OAstV-1)

Query: 1 PGTSQPA 7
PG SQPA
Sbjct: 402 PGASQPA 408


>sp|P54_ASFK5|INNER membrane protein p54|African swine fever virus (isolate

Query: 1 PGTSQPA 7
PGTS+PA
Sbjct: 87 PGTSKPA 93




2|SequenceR|15|6|SPAPPPGTSQ

>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 1 SPAPPPGT 8
+P PPPGT
Sbjct: 2861 APPPPPGT 2868


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 SPAPPPGT 8
+P PPPGT
Sbjct: 2863 APPPPPGT 2870


Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1800 ATPPGTS 1806


>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)

Query: 3 APPPGTSQ 10
APPPG+S+
Sbjct: 1006 APPPGSSK 1013


>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 2 PAPPP 6
PAPPP
Sbjct: 2279 PAPPP 2283


>sp|PP220_ASFP4|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 2 PAPPP 6
PAPPP
Sbjct: 2279 PAPPP 2283


>sp|PP220_ASFM2|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 2 PAPPP 6
PAPPP
Sbjct: 2279 PAPPP 2283


>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9

Query: 2 PAPPPGTSQ 10
PA PP T+Q
Sbjct: 137 PANPPTTAQ 145


>sp|RIR2_BHV1C|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Bovine herpesvirus 1.1 (strain Cooper)

Query: 4 PPPGT 8
PPPGT
Sbjct: 279 PPPGT 283


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1 SPAPPPGTSQ 10
+P PP GT++
Sbjct: 2885 APEPPAGTAR 2894


Query: 3 APPPGTSQ 10
A PPGT++
Sbjct: 1815 ATPPGTTE 1822


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 SPAPPPGTSQ 10
+P PP GT +
Sbjct: 2852 APEPPQGTRE 2861


Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1789 ATPPGTS 1795


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1805 ATPPGTS 1811


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1805 ATPPGTS 1811


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1805 ATPPGTS 1811


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1805 ATPPGTS 1811


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1805 ATPPGTS 1811


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1805 ATPPGTS 1811


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1805 ATPPGTS 1811


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1805 ATPPGTS 1811


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1805 ATPPGTS 1811


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1818 ATPPGTS 1824


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1822 ATPPGTS 1828


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1822 ATPPGTS 1828


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 3 APPPGTSQ 10
A PPGT++
Sbjct: 1809 ATPPGTTE 1816


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 SPAPPPGT 8
+P P PGT
Sbjct: 2850 TPQPKPGT 2857


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 3 APPPGTS 9
A PPGTS
Sbjct: 1820 ATPPGTS 1826


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 SPAPPPGT 8
+P P PGT
Sbjct: 2850 TPQPKPGT 2857


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 SPAPPPGT 8
+P P PGT
Sbjct: 2850 TPQPKPGT 2857


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 SPAPPPGT 8
+P P PGT
Sbjct: 2850 TPQPKPGT 2857


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 1 SPAPPPG 7
SPA PPG
Sbjct: 1123 SPADPPG 1129


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 1 SPAPPPG 7
SPA PPG
Sbjct: 1123 SPADPPG 1129


>sp|VF232_IIV3|PUTATIVE ubiquitin thioesterase 232R|Invertebrate iridescent virus 3

Query: 4 PPPGTSQ 10
PPPG+SQ
Sbjct: 54 PPPGSSQ 60


>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)

Query: 2 PAPPPGTS 9
PA PPGT+
Sbjct: 162 PAEPPGTN 169


>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 PAPPPGTS 9
PA PPGT+
Sbjct: 162 PAEPPGTN 169


>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5

Query: 1 SPAPPPGTS 9
+P+PPP S
Sbjct: 26 APSPPPTAS 34


>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 SPAPPPGTS 9
SPAP PGT+
Sbjct: 668 SPAPRPGTT 676


>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)

Query: 1 SPAPPPGTS 9
SPAP PGT+
Sbjct: 698 SPAPRPGTT 706


>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 SPAPPPGTS 9
SPAP PGT+
Sbjct: 698 SPAPRPGTT 706


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 APPPGTSQ 10
A PPGT++
Sbjct: 1790 ATPPGTAE 1797




3|SequenceR|20|11|QPLGPSPAPP

>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 QPLGPSPAP 9
+PLGP+ AP
Sbjct: 5781 EPLGPAYAP 5789


>sp|KR74_ICHVA|PROTEIN kinase ORF74|Ictalurid herpesvirus 1 (strain Auburn)

Query: 4 GPSPAPP 10
GP PAPP
Sbjct: 412 GPGPAPP 418


>sp|ENV_CAEVG|ENVELOPE glycoprotein|Caprine arthritis encephalitis virus (strain

Query: 1 QPLGPSPAP 9
QPLG P P
Sbjct: 117 QPLGAYPDP 125


>sp|ENV_CAEVC|ENVELOPE glycoprotein|Caprine arthritis encephalitis virus (strain

Query: 1 QPLGPSPAP 9
QPLG P P
Sbjct: 120 QPLGAYPDP 128


>sp|Y102_OSHVF|UNCHARACTERIZED protein ORF102|Ostreid herpesvirus 1 (isolate France)

Query: 4 GPSPAPP 10
GP+P PP
Sbjct: 371 GPTPVPP 377


>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PLGPSPAP 9
PLG SP P
Sbjct: 455 PLGDSPQP 462


>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PLGPSPAP 9
PLG SP P
Sbjct: 455 PLGDSPQP 462


>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007

Query: 2 PLGPSPAP 9
PLG +P+P
Sbjct: 162 PLGEAPSP 169


>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New

Query: 2 PLGPSPAP 9
PLG +P+P
Sbjct: 162 PLGEAPSP 169


>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996

Query: 2 PLGPSPAP 9
PLG +P+P
Sbjct: 162 PLGEAPSP 169


>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006

Query: 2 PLGPSPAP 9
PLG +P+P
Sbjct: 162 PLGEAPSP 169


>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996

Query: 2 PLGPSPAP 9
PLG +P+P
Sbjct: 162 PLGEAPSP 169


>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40

Query: 1 QPLGPSPAPP 10
+ +GP+ APP
Sbjct: 231 ETVGPAQAPP 240


>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959

Query: 2 PLGPSPAP 9
P+G SP+P
Sbjct: 162 PIGESPSP 169


>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)

Query: 3 LGPSPAPP 10
LGP APP
Sbjct: 64 LGPPTAPP 71


>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)

Query: 1 QPLGPSPAP 9
QPL +PAP
Sbjct: 296 QPLYSAPAP 304


>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)

Query: 1 QPLGPSPAP 9
QPL +PAP
Sbjct: 296 QPLYSAPAP 304


>sp|ME53_NPVAC|EARLY 53 kDa protein|Autographa californica nuclear polyhedrosis virus

Query: 1 QPLGPSPAPP 10
QP+ SPA P
Sbjct: 56 QPMCTSPAKP 65


>sp|MVP_RRSVT|MOVEMENT and RNA silencing protein|Rice ragged stunt virus (isolate

Query: 5 PSPAPP 10
PSP PP
Sbjct: 372 PSPTPP 377


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1 QPLGPSPAP 9
QP P PAP
Sbjct: 1752 QPTKPIPAP 1760


>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 PSPAPP 10
P+PAPP
Sbjct: 292 PTPAPP 297


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2 PLGPSPAPP 10
PLG S PP
Sbjct: 1666 PLGNSDRPP 1674




4|SequenceR|25|16|PPFAPQPLGP

>sp|DPOL_VACCW|DNA polymerase|Vaccinia virus (strain Western Reserve)

Query: 1 PPFAPQPLG 9
PPF +PLG
Sbjct: 53 PPFNARPLG 61


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 PPFAPQPLG 9
PPF +PLG
Sbjct: 53 PPFNARPLG 61


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 1 PPFAPQPLG 9
PPF +PLG
Sbjct: 53 PPFNARPLG 61


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 1 PPFAPQPLG 9
PPF +P+G
Sbjct: 53 PPFNARPMG 61


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 PPFAPQPLG 9
PPF +P+G
Sbjct: 53 PPFNARPMG 61


>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 1 PPFAPQPLG 9
PPF +P+G
Sbjct: 53 PPFNARPMG 61


>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)

Query: 2 PFAPQPLG 9
PFAP P G
Sbjct: 3 PFAPVPAG 10


>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)

Query: 2 PFAPQPLG 9
PFAP P G
Sbjct: 3 PFAPVPAG 10


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 2 PFAPQP 7
PFAP+P
Sbjct: 1996 PFAPEP 2001


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 2 PFAPQP 7
PFAP+P
Sbjct: 1993 PFAPEP 1998


>sp|VP91_NPVOP|CAPSID-ASSOCIATED protein Vp91|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 PFAPQP 7
PFAPQP
Sbjct: 619 PFAPQP 624


>sp|NS1_I80AD|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Gull/Minnesota/945/1980

Query: 1 PPFAPQ 6
PPFAP+
Sbjct: 212 PPFAPK 217


>sp|NS1_I80AC|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Gull/Massachusetts/26/1980

Query: 1 PPFAPQ 6
PPFAP+
Sbjct: 212 PPFAPK 217


>sp|NS1_I78AF|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Gull/Maryland/1824/1978

Query: 1 PPFAPQ 6
PPFAP+
Sbjct: 212 PPFAPK 217


>sp|NS1_I77AF|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Gull/Maryland/704/1977

Query: 1 PPFAPQ 6
PPFAP+
Sbjct: 212 PPFAPK 217


>sp|088R_FRG3G|PUTATIVE FAD-linked sulfhydryl oxidase 088R|Frog virus 3 (isolate Goorha)

Query: 2 PFAPQPLGP 10
PF P GP
Sbjct: 25 PFGPSGFGP 33


>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 FAPQPLG 9
F PQP+G
Sbjct: 460 FKPQPVG 466


>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)

Query: 3 FAPQPLG 9
F PQP+G
Sbjct: 460 FKPQPVG 466


>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)

Query: 3 FAPQPLG 9
F PQP+G
Sbjct: 460 FKPQPVG 466


>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)

Query: 3 FAPQPLG 9
F PQP+G
Sbjct: 460 FKPQPVG 466


>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)

Query: 3 FAPQPLG 9
F PQP+G
Sbjct: 460 FKPQPVG 466


>sp|SPIKE_CVBF|SPIKE glycoprotein|Bovine coronavirus (strain F15) (BCoV)

Query: 3 FAPQPLG 9
F PQP+G
Sbjct: 460 FKPQPVG 466


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 PPFAPQPL 8
P F PQP+
Sbjct: 6622 PTFMPQPV 6629


>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 4 APQPLGP 10
AP+PL P
Sbjct: 1788 APEPLSP 1794


>sp|AKT_MLVAT|AKT kinase-transforming protein|AKT8 murine leukemia virus

Query: 1 PPFAPQ 6
PPF PQ
Sbjct: 444 PPFKPQ 449


>sp|RIR1_SUHVK|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Suid herpesvirus 1 (strain Kaplan)

Query: 1 PPFAPQPLG 9
PP AP+P G
Sbjct: 2 PPRAPRPAG 10


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 PPFAPQPL 8
P F PQP+
Sbjct: 6498 PQFMPQPV 6505


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 2 PFAPQPLGP 10
PFAP L P
Sbjct: 2129 PFAPWQLSP 2137


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 1 PPFAPQPLGP 10
PPF P GP
Sbjct: 1003 PPFFPAAQGP 1012


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 3 FAPQPLGP 10
+AP+P+GP
Sbjct: 2600 YAPRPIGP 2607


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 2 PFAPQPLGP 10
PFAP L P
Sbjct: 2129 PFAPWQLSP 2137




5|SequenceR|30|21|PATQGPPFAP

>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New

Query: 3 TQGPPFAP 10
T GPPF P
Sbjct: 209 TGGPPFTP 216


>sp|NS1_I96A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 5 GPPFAP 10
GPPF P
Sbjct: 211 GPPFTP 216


>sp|VP41_NPVOP|STRUCTURAL glycoprotein gp41|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 PATQGPPFAP 10
P+ G PFAP
Sbjct: 11 PSQSGHPFAP 20


>sp|NCAP_TAMVU|NUCLEOPROTEIN mammarenavirus (isolate Rat/United States/W

Query: 4 QGPPFAP 10
+GPPF P
Sbjct: 383 EGPPFDP 389


>sp|NS1_I80AC|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Gull/Massachusetts/26/1980

Query: 6 PPFAP 10
PPFAP
Sbjct: 212 PPFAP 216


>sp|NS1_I77AF|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Gull/Maryland/704/1977

Query: 6 PPFAP 10
PPFAP
Sbjct: 212 PPFAP 216


>sp|NS1_I78AF|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Gull/Maryland/1824/1978

Query: 6 PPFAP 10
PPFAP
Sbjct: 212 PPFAP 216


>sp|NS1_I80AD|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Gull/Minnesota/945/1980

Query: 6 PPFAP 10
PPFAP
Sbjct: 212 PPFAP 216


>sp|TERM_ADES1|PRETERMINAL protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 PATQGPPF 8
P T+ PPF
Sbjct: 67 PVTRNPPF 74


>sp|POLN_ELV|NON-STRUCTURAL replication polyprotein|Erysimum latent virus (ELV)

Query: 1 PATQGPPFAP 10
PATQ PP P
Sbjct: 611 PATQSPPSIP 620


>sp|DBH2_BPSPB|DNA-BINDING protein HU 2|Bacillus phage SPbeta (Bacillus phage

Query: 1 PATQGPPFAP 10
PAT+ P F P
Sbjct: 72 PATKAPAFKP 81


>sp|RDRP_PSVJ|RNA-DIRECTED RNA polymerase 2a|Peanut stunt virus (strain J)

Query: 1 PATQGPP 7
PA+ GPP
Sbjct: 824 PASTGPP 830


>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)

Query: 4 QGPPFAP 10
QGPP AP
Sbjct: 84 QGPPIAP 90




6|SequenceR|35|26|TSFVVPATQG

>sp|DPOL_NPVBM|DNA polymerase|Bombyx mori nuclear polyhedrosis virus

Query: 1 TSFVVPATQG 10
T+FV P +G
Sbjct: 90 TTFVAPGVEG 99


>sp|DPOL_NPVAC|DNA polymerase|Autographa californica nuclear polyhedrosis virus

Query: 1 TSFVVPATQG 10
T+FV P +G
Sbjct: 90 TTFVAPGVEG 99


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 1 TSFVVPATQ 9
T+F+ PA Q
Sbjct: 2316 TTFITPAVQ 2324


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1 TSFVVPATQ 9
T+F+ PA Q
Sbjct: 2316 TTFITPAVQ 2324


>sp|CAPS1_SPV1|CAPSID protein VP4|Sulfolobus polyhedral virus 1 (SPV1)

Query: 2 SFVVPATQ 9
S V+PATQ
Sbjct: 60 SLVIPATQ 67


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 3 FVVPATQG 10
F++P TQG
Sbjct: 634 FILPDTQG 641


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 3 FVVPATQG 10
F++P TQG
Sbjct: 634 FILPDTQG 641


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 3 FVVPATQG 10
F++P TQG
Sbjct: 634 FILPDTQG 641


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 3 FVVPATQG 10
F++P TQG
Sbjct: 634 FILPDTQG 641


>sp|SCAF_LAMBD|CAPSID assembly protease C|Escherichia phage lambda (Bacteriophage lambda)

Query: 4 VVPATQG 10
VVPAT+G
Sbjct: 330 VVPATEG 336


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 3 FVVPATQG 10
F++P TQG
Sbjct: 635 FILPDTQG 642


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 3 FVVPATQG 10
F++P TQG
Sbjct: 635 FILPDTQG 642


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 2 SFVVPATQG 10
+ VPATQG
Sbjct: 333 NITVPATQG 341




7|SequenceR|40|31|QTAQPTSFVV

>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 QTAQPTSFV 9
+TAQPT FV
Sbjct: 1991 ETAQPTVFV 1999


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1 QTAQPTSFV 9
+TAQPT FV
Sbjct: 1964 ETAQPTVFV 1972


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1 QTAQPTSFV 9
+TAQPT FV
Sbjct: 1969 ETAQPTVFV 1977


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 2 TAQPTSFVV 10
TAQPT VV
Sbjct: 548 TAQPTDHVV 556


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 2 TAQPTSFVV 10
TAQPT VV
Sbjct: 548 TAQPTDHVV 556


>sp|CAPSD_PAV|CAPSID protein alpha|Pariacoto virus (PaV)

Query: 3 AQPTSFV 9
AQPT+FV
Sbjct: 125 AQPTTFV 131




8|SequenceR|45|36|SPTNMQTAQP

>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 2 PTNMQTA 8
PTN+QTA
Sbjct: 3792 PTNVQTA 3798


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 PTNMQTA 8
PTN+QTA
Sbjct: 3792 PTNVQTA 3798


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 2 PTNMQTA 8
PTN+QTA
Sbjct: 3917 PTNVQTA 3923


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 2 PTNMQTA 8
PTN+QTA
Sbjct: 3917 PTNVQTA 3923




9|SequenceR|50|41|HQRPQSPTNM

>sp|YL007_MIMIV|UNCHARACTERIZED protein L7|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 QRPQSPTN 9
+ PQ PTN
Sbjct: 105 ETPQEPTN 112


>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 HQRPQSPT 8
HQ+P +PT
Sbjct: 120 HQKPTAPT 127


>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 HQRPQSPT 8
HQ+P +PT
Sbjct: 120 HQKPTAPT 127


>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 HQRPQSPT 8
HQ+P +PT
Sbjct: 120 HQKPTAPT 127




10|SequenceR|55|46|RSPYFHQRPQ

>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P

Query: 1 RSPYFHQRP 9
R+P HQ+P
Sbjct: 349 RTPTVHQKP 357


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 1 RSPYFH 6
R PYFH
Sbjct: 1724 RGPYFH 1729


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 YFHQRPQ 10
+FH RPQ
Sbjct: 906 HFHSRPQ 912


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 4 YFHQRPQ 10
+FH RPQ
Sbjct: 906 HFHSRPQ 912


>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United

Query: 2 SPYFHQ 7
SPYFH+
Sbjct: 327 SPYFHR 332


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 PYFHQRPQ 10
P FH +PQ
Sbjct: 241 PIFHTQPQ 248


>sp|YO22_ADEG1|UNCHARACTERIZED protein ORF22|Fowl adenovirus A serotype 1

Query: 2 SPYFHQRP 9
SP F QRP
Sbjct: 118 SPVFMQRP 125


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 5 FHQRPQ 10
FH RPQ
Sbjct: 465 FHSRPQ 470




11|SequenceR|60|51|SPPQARSPYF

>sp|VG10_ICHVA|PUTATIVE membrane protein ORF10|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 SPPQARSPY 9
SPP SPY
Sbjct: 142 SPPTMMSPY 150


>sp|VE1_COPV6|REPLICATION protein E1|Canine oral papillomavirus (strain Y62)

Query: 2 PPQARSP 8
PP+ RSP
Sbjct: 256 PPKTRSP 262


>sp|VF380_IIV6|PROBABLE serine/threonine-protein kinase 380R|Invertebrate iridescent

Query: 1 SPPQARSP 8
SPP+ +SP
Sbjct: 77 SPPKVKSP 84


>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)

Query: 2 PPQARSPYF 10
PP+AR P F
Sbjct: 3658 PPRARLPVF 3666


>sp|VFUS_VACC6|14 kDa fusion protein|Vaccinia virus (strain WR 65-16)

Query: 2 PPQARSP 8
PP+ARSP
Sbjct: 7 PPRARSP 13


>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PPQARSPY 9
PP R+PY
Sbjct: 457 PPMCRAPY 464




12|SequenceR|65|56|RSAASSPPQA

>sp|UL33_MUHVS|G-PROTEIN coupled receptor homolog M33|Murid herpesvirus 1 (strain Smith)

Query: 1 RSAASSPPQ 9
RSA++ PPQ
Sbjct: 369 RSASAPPPQ 377




13|SequenceR|70|61|AASQVRSAAS

***** No hits found ******


14|SequenceR|75|66|GPRAPAASQV

>sp|GAG_FSVHZ|GAG polyprotein|Feline sarcoma virus (strain Hardy-Zuckerman

Query: 1 GPRAPAASQV 10
GPR P AS +
Sbjct: 170 GPRTPTASPI 179


>sp|GGAG_FSVHZ|GLYCO-GAG protein|Feline sarcoma virus (strain Hardy-Zuckerman

Query: 1 GPRAPAASQV 10
GPR P AS +
Sbjct: 244 GPRTPTASPI 253


>sp|GB_HSVA1|ENVELOPE glycoprotein B|Herpesvirus ateles type 1 (strain

Query: 1 GPRAPAA 7
GPR PAA
Sbjct: 40 GPRGPAA 46




15|SequenceR|80|71|VHAAPGPRAP

>sp|NCAP_CPXVB|NUCLEOPROTEIN mammarenavirus (isolate Rat/Brasil/BeAn 119303/1970)

Query: 5 PGPRAP 10
PGPRAP
Sbjct: 339 PGPRAP 344


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 1 VHAAPGPRAP 10
VHAAPG AP
Sbjct: 282 VHAAPGALAP 291


>sp|HA70D_CBDP|HEMAGGLUTININ component HA-70 type D|Clostridium botulinum D phage (Clostridium

Query: 1 VHAAPGPRAP 10
V AP P+AP
Sbjct: 339 VSDAPSPQAP 348


>sp|HA70C_CBCP|HEMAGGLUTININ components HA-70 type C|Clostridium botulinum C phage (Clostridium

Query: 1 VHAAPGPRAP 10
V AP P+AP
Sbjct: 339 VSDAPSPQAP 348


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 VHAAPGPRAP 10
+HA P P P
Sbjct: 4592 IHAPPTPHDP 4601


>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2

Query: 1 VHAAPGPRAP 10
VHAAPG AP
Sbjct: 282 VHAAPGALAP 291


>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain

Query: 1 VHAAPGPRAP 10
++ + GPRAP
Sbjct: 301 LYLSKGPRAP 310


>sp|NCAP_PI3B|NUCLEOPROTEIN parainfluenza 3 virus (BPIV-3)

Query: 1 VHAAPGPRAP 10
++ + GPRAP
Sbjct: 301 LYLSKGPRAP 310


>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)

Query: 4 APGPRAP 10
PGPR P
Sbjct: 551 GPGPRVP 557


>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 5 PGPRAP 10
PGPR P
Sbjct: 202 PGPRTP 207


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1586 HAKPGP 1591


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1578 HAKPGP 1583


>sp|POLG_MRFVC|GENOME polyprotein|Maize rayado fino virus (isolate

Query: 4 APGPRAP 10
PGPRAP
Sbjct: 662 TPGPRAP 668


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1578 HAKPGP 1583


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1577 HAKPGP 1582


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1590 HAKPGP 1595


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1588 HAKPGP 1593


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1582 HAKPGP 1587


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1579 HAKPGP 1584


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1596 HAKPGP 1601


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1580 HAKPGP 1585


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1579 HAKPGP 1584


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1580 HAKPGP 1585


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1591 HAKPGP 1596


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1580 HAKPGP 1585


>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 282 HATPGP 287


>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1580 HAKPGP 1585


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1588 HAKPGP 1593


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1589 HAKPGP 1594


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 2 HAAPGP 7
HA PGP
Sbjct: 1580 HAKPGP 1585


>sp|KFMS_FSVMD|TYROSINE-PROTEIN kinase transforming protein fms|Feline sarcoma virus (strain

Query: 5 PGPRAP 10
PGPR P
Sbjct: 16 PGPRPP 21


>sp|GB_HSVA1|ENVELOPE glycoprotein B|Herpesvirus ateles type 1 (strain

Query: 1 VHAAPGPRAP 10
V A PGPR P
Sbjct: 35 VAAPPGPRGP 44




16|SequenceR|85|76|SGAPYVHAAP

>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 4 PYVHAAP 10
PY+HAAP
Sbjct: 2934 PYLHAAP 2940


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 4 PYVHAAP 10
PY+HAAP
Sbjct: 2934 PYLHAAP 2940


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 4 PYVHAAP 10
PY+HA+P
Sbjct: 2814 PYLHASP 2820


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 4 PYVHAAP 10
PY+HA+P
Sbjct: 2814 PYLHASP 2820


>sp|VP3_BTV11|CORE protein VP3|Bluetongue virus 11 (isolate USA)

Query: 3 APYVHA 8
APYVHA
Sbjct: 463 APYVHA 468


>sp|CAPSD_BTV13|INNER capsid protein VP3|Bluetongue virus 13 (isolate USA)

Query: 3 APYVHA 8
APYVHA
Sbjct: 463 APYVHA 468


>sp|VP3_BTV17|CORE protein VP3|Bluetongue virus 17 (isolate USA)

Query: 3 APYVHA 8
APYVHA
Sbjct: 463 APYVHA 468


>sp|VP3_BTV10|CORE protein VP3|Bluetongue virus 10 (isolate USA)

Query: 3 APYVHA 8
APYVHA
Sbjct: 463 APYVHA 468


>sp|VP3_BTV2A|CORE protein VP3|Bluetongue virus 2 (isolate USA)

Query: 3 APYVHA 8
APYVHA
Sbjct: 463 APYVHA 468


>sp|VP3_BTV1A|CORE protein VP3|Bluetongue virus 1 (isolate Australia)

Query: 3 APYVHA 8
APYVHA
Sbjct: 463 APYVHA 468


>sp|VP3_BTV1S|CORE protein VP3|Bluetongue virus 1 (isolate South

Query: 3 APYVHA 8
APYVHA
Sbjct: 463 APYVHA 468


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 2 GAPYVH 7
GAPYVH
Sbjct: 1240 GAPYVH 1245


>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)

Query: 1 SGAPYVHA 8
+G PYVHA
Sbjct: 143 NGTPYVHA 150


>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)

Query: 1 SGAPYVHA 8
+G PYVHA
Sbjct: 143 NGTPYVHA 150


>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain

Query: 1 SGAPYVHA 8
+G PYVHA
Sbjct: 143 NGTPYVHA 150


>sp|HELI_PSHV1|DNA replication helicase|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 SGAPYVHAAP 10
SG P+ AAP
Sbjct: 196 SGKPFTDAAP 205


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 3 APYVHAAP 10
APYV+A P
Sbjct: 273 APYVNAVP 280


>sp|NCAP_MUMPV|NUCLEOPROTEIN orthorubulavirus (MuV)

Query: 1 SGAPYVHA 8
+G PYVHA
Sbjct: 143 NGTPYVHA 150


>sp|NS1A_TASV1|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 1 (TAstV-1)

Query: 1 SGAPYV 6
SGAPYV
Sbjct: 647 SGAPYV 652


>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)

Query: 1 SGAPYV 6
SGAPYV
Sbjct: 647 SGAPYV 652


>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain

Query: 1 SGAPYVHA 8
+G PYVHA
Sbjct: 143 NGTPYVHA 150


>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain

Query: 1 SGAPYVHA 8
+G PYVHA
Sbjct: 143 NGTPYVHA 150


>sp|PORTL_BP44A|PORTAL protein|Staphylococcus phage 44AHJD

Query: 1 SGAPYVHAAP 10
+GAP+V +P
Sbjct: 124 NGAPFVKMSP 133


>sp|YL759_MIMIV|UNCHARACTERIZED protein L759|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 PYVHAAP 10
PYVH P
Sbjct: 54 PYVHCDP 60


>sp|RIR1_IIV3|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 SGAPYVH 7
+G PY+H
Sbjct: 287 TGEPYIH 293


>sp|CAP3_ADECR|PRE-HEXON-LINKING protein IIIa|Canine adenovirus serotype 1 (strain

Query: 1 SGAPYVHAAP 10
SG P+ H P
Sbjct: 548 SGNPFAHLRP 557


>sp|CAP3_ADECC|PRE-HEXON-LINKING protein IIIa|Canine adenovirus serotype 1 (strain

Query: 1 SGAPYVHAAP 10
SG P+ H P
Sbjct: 548 SGNPFAHLRP 557




17|SequenceR|90|81|IMMVQSGAPY

***** No hits found ******


18|SequenceR|95|86|SIQSPIMMVQ

***** No hits found ******


19|SequenceR|100|91|QSAPYSIQSP

>sp|ENLYS_BPSH5|ENDOLYSIN LysH5|Staphylococcus phage phiH5 (Bacteriophage phiH5)

Query: 1 QSAPYSIQSP 10
++AP S+QSP
Sbjct: 154 ETAPRSVQSP 163


>sp|RDRP_AHNNV|RNA-DIRECTED RNA polymerase|Atlantic halibut nervous necrosis virus

Query: 2 SAPYSIQSP 10
S+P S+QSP
Sbjct: 735 SSPASVQSP 743




20|SequenceR|105|96|IYYAGQSAPY

>sp|RDRP_SBMVA|REPLICASE polyprotein P2AB|Southern bean mosaic virus (isolate

Query: 1 IYYAGQSAPY 10
+YY QSAPY
Sbjct: 77 VYYTAQSAPY 86


>sp|P2A_SBMVA|POLYPROTEIN P2A|Southern bean mosaic virus (isolate

Query: 1 IYYAGQSAPY 10
+YY QSAPY
Sbjct: 77 VYYTAQSAPY 86


>sp|TSP_BPMU|TAIL sheath protein|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 YYAGQSAPY 10
YYAG++ PY
Sbjct: 193 YYAGETTPY 201


>sp|PRIM_SHV21|DNA primase|Saimiriine herpesvirus 2 (strain 11)

Query: 1 IYYAGQS 7
+Y+AGQS
Sbjct: 353 VYWAGQS 359




21|SequenceR|110|101|RGQGPIYYAG

>sp|V228_FOWPN|PUTATIVE ankyrin repeat protein FPV228|Fowlpox virus (strain NVSL) (FPV)

Query: 1 RGQGPIYYA 9
RG+ P+YYA
Sbjct: 291 RGKTPLYYA 299


>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)

Query: 1 RGQGPIYYA 9
RG+G IYY+
Sbjct: 57 RGRGVIYYS 65


>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2

Query: 2 GQGPIY 7
GQGP+Y
Sbjct: 285 GQGPLY 290


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 1 RGQGPIYYAG 10
+G GPI YAG
Sbjct: 467 QGWGPISYAG 476


>sp|1A_AMV|REPLICATION protein 1a|Alfalfa mosaic virus (AMV)

Query: 3 QGPIYYAG 10
+GP++Y+G
Sbjct: 457 EGPMWYSG 464


>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|RP132_VACCW|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Western Reserve)

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 4 GPIYY 8
GPIYY
Sbjct: 1003 GPIYY 1007


>sp|RP132_SHEVK|DNA-DIRECTED RNA polymerase 132 kDa|Sheeppox virus (strain KS-1) (SPPV)

Query: 4 GPIYY 8
GPIYY
Sbjct: 767 GPIYY 771


>sp|RP132_RABPU|DNA-DIRECTED RNA polymerase 132 kDa|Rabbitpox virus (strain Utrecht) (RPV)

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16) (MPXV)

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|RP132_ECTVM|DNA-DIRECTED RNA polymerase 132 kDa|Ectromelia virus (strain Moscow) (ECTV)

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|RP132_CAMPS|DNA-DIRECTED RNA polymerase 132 kDa|Camelpox virus (strain CMS)

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|RP132_CAMPM|DNA-DIRECTED RNA polymerase 132 kDa|Camelpox virus (strain M-96)

Query: 4 GPIYY 8
GPIYY
Sbjct: 1011 GPIYY 1015


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 RGQGPIYYAG 10
+G GPI Y G
Sbjct: 467 QGWGPITYGG 476


>sp|VP4_MPRVN|UNCHARACTERIZED protein VP4|Micromonas pusilla reovirus (isolate Netherlands/2005)

Query: 2 GQGPIYYAG 10
G+GP Y +G
Sbjct: 163 GRGPTYQSG 171


>sp|YO18_ADEG1|UNCHARACTERIZED protein ORF18|Fowl adenovirus A serotype 1

Query: 3 QGPIYYA 9
+GP YYA
Sbjct: 149 RGPAYYA 155


>sp|GAD1_BPSH1|GABIJA anti-defense 1|Shewanella phage 1/4

Query: 2 GQGPIYYA 9
GQG YYA
Sbjct: 112 GQGSKYYA 119


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 RGQGPIYYA 9
+G GPI YA
Sbjct: 467 QGWGPISYA 475


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 RGQGPIYYA 9
+G GPI YA
Sbjct: 467 QGWGPISYA 475


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 RGQGPIYYA 9
+G GPI YA
Sbjct: 466 QGWGPITYA 474




22|SequenceR|115|106|VVYTSRGQGP

>sp|US10_HHV2H|VIRION protein US10|Human herpesvirus 2 (strain HG52)

Query: 1 VVYTSRGQG 9
V+ TSRGQG
Sbjct: 290 VLTTSRGQG 298


>sp|MCE_MIMIV|PROBABLE mRNA-capping enzyme|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VVYTSRGQG 9
+VY +RG G
Sbjct: 124 IVYKNRGSG 132


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 1 VVYTSRGQ 8
V YT+RGQ
Sbjct: 1636 VQYTARGQ 1643




23|SequenceR|120|111|YQQTPVVYTS

>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1 YQQTPVVYTS 10
Y PV YTS
Sbjct: 1317 YDVIPVTYTS 1326


>sp|PORTL_BPE15|PORTAL protein|Salmonella phage epsilon15

Query: 1 YQQTPVVYTS 10
YQ PV+Y S
Sbjct: 120 YQSLPVMYAS 129


>sp|FIB37_BPAR1|LONG tail fiber protein Gp37|Escherichia phage AR1 (Bacteriophage AR1)

Query: 4 TPVVYTS 10
TPV+YT+
Sbjct: 183 TPVIYTN 189


>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus

Query: 4 TPVVYT 9
TPVVYT
Sbjct: 725 TPVVYT 730


>sp|Y098_OSHVF|UNCHARACTERIZED protein ORF98|Ostreid herpesvirus 1 (isolate France)

Query: 1 YQQTPVVYTS 10
Y +TP+ Y+S
Sbjct: 4 YYRTPLYYSS 13




24|SequenceR|125|116|GPQVPYQQTP

>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 1 GPQVPYQQTP 10
GPQ P ++TP
Sbjct: 1222 GPQFPLEETP 1231


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 3 QVPYQQTP 10
Q P+QQ P
Sbjct: 1304 QAPFQQNP 1311


>sp|VG430_BPPF3|PUTATIVE assembly protein ORF430|Pseudomonas phage Pf3 (Bacteriophage Pf3)

Query: 1 GPQVPYQQT 9
G ++PYQQ+
Sbjct: 279 GTELPYQQS 287


>sp|VE6_PAPVE|PROTEIN E6|European elk papillomavirus (EEPV)

Query: 1 GPQVPYQQTP 10
G + PY++TP
Sbjct: 123 GSRPPYKETP 132


>sp|VF229_IIV3|UNCHARACTERIZED protein 229L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 PQVPYQQT 9
P++P+QQT
Sbjct: 303 PKIPHQQT 310


>sp|VF171_ASFP4|UNCHARACTERIZED protein H171R|African swine fever virus (isolate

Query: 2 PQVPYQQTP 10
P +PYQQ+P
Sbjct: 85 PLLPYQQSP 93


>sp|VF171_ASFWA|UNCHARACTERIZED protein H171R|African swine fever virus (isolate

Query: 2 PQVPYQQTP 10
P +PYQQ+P
Sbjct: 85 PLLPYQQSP 93


>sp|POLS_MIDDV|STRUCTURAL polyprotein|Middelburg virus

Query: 3 QVPYQQTP 10
VPY QTP
Sbjct: 1049 HVPYTQTP 1056


>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)

Query: 3 QVPYQQTP 10
VPY QTP
Sbjct: 1036 HVPYTQTP 1043


>sp|L_SHRV|RNA-DIRECTED RNA polymerase L|Snakehead rhabdovirus (SHRV)

Query: 1 GPQVPYQQT 9
GP VPY T
Sbjct: 1144 GPLVPYYGT 1152


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 3 QVPYQQTP 10
VPY QTP
Sbjct: 1030 HVPYTQTP 1037


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 3 QVPYQQTP 10
VPY QTP
Sbjct: 1045 HVPYTQTP 1052


>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)

Query: 3 QVPYQQTP 10
VPY QTP
Sbjct: 1046 HVPYTQTP 1053


>sp|YR832_MIMIV|PUTATIVE truncated GMC-type inactive oxidoreductase|Acanthamoeba polyphaga

Query: 3 QVPYQQTP 10
+VPY QTP
Sbjct: 73 EVPYVQTP 80


>sp|VP75_ALHV1|PROBABLE membrane antigen 75|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 GPQVPYQQ 8
GP VP+ Q
Sbjct: 216 GPDVPFAQ 223


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 3 QVPYQQTP 10
VPY QTP
Sbjct: 1045 HVPYTQTP 1052


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 3 QVPYQQTP 10
VPY QTP
Sbjct: 1045 HVPYTQTP 1052




25|SequenceR|130|121|YFGPAGPQVP

>sp|RPC_BPPHC|REPRESSOR protein C|Streptomyces phage phiC31 (Bacteriophage phi-C31)

Query: 1 YFGPAGPQVP 10
Y+GPA Q P
Sbjct: 241 YWGPAAEQKP 250


>sp|MVP_AMVST|MOVEMENT protein|Alfalfa mosaic virus (strain Strasbourg)

Query: 1 YFGPAGPQVP 10
+F P GP VP
Sbjct: 250 FFIPEGPSVP 259


>sp|VG79_ICHVA|UNCHARACTERIZED protein ORF79|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 YFGPAGPQVP 10
YFGP G +P
Sbjct: 74 YFGPKGGLIP 83


>sp|COLL3_MIMIV|COLLAGEN-LIKE protein 3|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 GPAGPQVP 10
GP+GPQ P
Sbjct: 88 GPSGPQGP 95


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 GPAGPQV 9
GP GP+V
Sbjct: 4294 GPKGPEV 4300


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 GPAGPQV 9
GP GP+V
Sbjct: 4294 GPKGPEV 4300


>sp|DPOZ_BPVC8|DNA polymerase DpoZ|Vibrio phage phiVC8

Query: 1 YFGPAGPQVP 10
Y GPA Q+P
Sbjct: 361 YTGPALQQIP 370


>sp|007R_IIV3|UNCHARACTERIZED protein 007R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 YFGPAGPQ 8
YFG +GP+
Sbjct: 61 YFGISGPK 68


>sp|MVP_AMVYS|MOVEMENT protein|Alfalfa mosaic virus (strain YSMV)

Query: 2 FGPAGPQVP 10
F P GP VP
Sbjct: 251 FIPEGPSVP 259


>sp|MVP_AMVLE|MOVEMENT protein|Alfalfa mosaic virus (strain 425

Query: 2 FGPAGPQVP 10
F P GP VP
Sbjct: 251 FIPEGPSVP 259


>sp|MVP_AMV|MOVEMENT protein|Alfalfa mosaic virus (AMV)

Query: 2 FGPAGPQVP 10
F P GP VP
Sbjct: 251 FIPEGPSVP 259


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 1 YFGPAGPQ 8
+F PAGP+
Sbjct: 23 FFAPAGPR 30


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 1 YFGPAGPQ 8
+F PAGP+
Sbjct: 23 FFAPAGPR 30


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 1 YFGPAGPQ 8
+F PAGP+
Sbjct: 23 FFAPAGPR 30


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 3 GPAGPQVP 10
GP GP VP
Sbjct: 2091 GPQGPNVP 2098


>sp|GAG_SIVGB|GAG polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 2 FGPAGPQVP 10
+GP GP P
Sbjct: 436 YGPWGPSKP 444


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 3 GPAGPQVP 10
GP GP VP
Sbjct: 2091 GPQGPNVP 2098


>sp|SAK_BPP42|STAPHYLOKINASE phage 42D (Bacteriophage P42D)

Query: 1 YFGPAGP 7
YF P GP
Sbjct: 44 YFEPTGP 50




26|SequenceR|135|126|PSAGPYFGPA

>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 1 PSAGPYFGPA 10
P A PY+GP
Sbjct: 851 PRAVPYYGPG 860


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 1 PSAGPYFGPA 10
P A PY+GP
Sbjct: 851 PRAVPYYGPG 860


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1 PSAGPYFGPA 10
P A PY+GP
Sbjct: 852 PRAVPYYGPG 861


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1 PSAGPYFGP 9
PSA PYF P
Sbjct: 358 PSAFPYFHP 366


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 PSAGPYFGPA 10
P A PY+GP
Sbjct: 852 PRAVPYYGPG 861


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 5 PYFGPA 10
PYFGPA
Sbjct: 533 PYFGPA 538


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 5 PYFGPA 10
PYFGPA
Sbjct: 533 PYFGPA 538


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 5 PYFGPA 10
PYFGPA
Sbjct: 533 PYFGPA 538


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 5 PYFGPA 10
PYFGPA
Sbjct: 533 PYFGPA 538


>sp|VF136_IIV3|UNCHARACTERIZED protein 042R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 PSAGPYFGP 9
P++GP GP
Sbjct: 52 PNSGPLVGP 60


>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote

Query: 5 PYFGPA 10
PYFGPA
Sbjct: 533 PYFGPA 538


>sp|UL79_ALHV1|GENE 18 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 SAGPYFGPA 10
SAGP F P
Sbjct: 20 SAGPGFSPG 28


>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 5 PYFGPA 10
PYFGPA
Sbjct: 534 PYFGPA 539


>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 5 PYFGPA 10
PYFGPA
Sbjct: 534 PYFGPA 539


>sp|BXD_CBDP|BOTULINUM neurotoxin type D|Clostridium botulinum D phage (Clostridium

Query: 5 PYFGPA 10
PY GPA
Sbjct: 626 PYIGPA 631


>sp|BXC_CBCP|BOTULINUM neurotoxin type C|Clostridium botulinum C phage (Clostridium

Query: 5 PYFGPA 10
PY GPA
Sbjct: 630 PYIGPA 635


>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 5 PYFGPA 10
PYFGPA
Sbjct: 534 PYFGPA 539


>sp|L_WWAVU|RNA-DIRECTED RNA polymerase L|Whitewater Arroyo mammarenavirus (isolate Rat/United

Query: 4 GPYFGPA 10
GPY PA
Sbjct: 1191 GPYMSPA 1197


>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United States/W

Query: 4 GPYFGPA 10
GPY PA
Sbjct: 1192 GPYMSPA 1198


>sp|L_BCNVU|RNA-DIRECTED RNA polymerase L|Bear Canyon mammarenavirus (isolate Mouse/United

Query: 4 GPYFGPA 10
GPY PA
Sbjct: 1188 GPYMSPA 1194


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 1 PSAGPYF 7
PSA P+F
Sbjct: 1141 PSAAPFF 1147


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 1 PSAGPYF 7
PSA P+F
Sbjct: 1142 PSAAPFF 1148


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 1 PSAGPYF 7
PSA P+F
Sbjct: 1142 PSAAPFF 1148


>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)

Query: 1 PSAGPYF 7
PSA P+F
Sbjct: 1142 PSAAPFF 1148


>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 5 PYFGPA 10
PYFGP
Sbjct: 533 PYFGPG 538


>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 5 PYFGPA 10
PYFGP
Sbjct: 533 PYFGPG 538


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United States/Urbana/1960)

Query: 1 PSAGPYF 7
PSA P+F
Sbjct: 1142 PSAAPFF 1148


>sp|ENV_AVIRE|ENVELOPE glycoprotein|Avian reticuloendotheliosis virus

Query: 1 PSAGPYFG 8
PS GP FG
Sbjct: 526 PSLGPLFG 533


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 5 PYFGPA 10
PYFGP
Sbjct: 533 PYFGPG 538


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 2 SAGPYFGPA 10
+AGPY GP
Sbjct: 1438 AAGPYNGPT 1446




27|SequenceR|140|131|TGFETPSAGP

>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate

Query: 1 TGFETPSAGP 10
+GFE P +GP
Sbjct: 811 SGFEIPLSGP 820


>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains

Query: 3 FETPSAGP 10
FETP GP
Sbjct: 59 FETPKQGP 66


>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain

Query: 3 FETPSAGP 10
FETP GP
Sbjct: 59 FETPKQGP 66


>sp|DPOL_TUHV1|DNA polymerase catalytic subunit|Tupaiid herpesvirus 1 (strain 1)

Query: 4 ETPSAGP 10
ETP+AGP
Sbjct: 661 ETPAAGP 667


>sp|DPOL_TUHV2|DNA polymerase catalytic subunit|Tupaiid herpesvirus (strain 2)

Query: 4 ETPSAGP 10
ETP+AGP
Sbjct: 661 ETPAAGP 667


>sp|GE_CHV9D|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 9 (strain DHV)

Query: 2 GFETPSAGP 10
GF+TP P
Sbjct: 258 GFDTPDVKP 266


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1 TGFETPSAGP 10
TG++ S+GP
Sbjct: 1046 TGYKVQSSGP 1055


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 1 TGFETPSAGP 10
TG T S GP
Sbjct: 1204 TGLHTGSGGP 1213




28|SequenceR|145|136|YAGAYTGFET

>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 1 YAGAYTGFET 10
+ G Y+GF+T
Sbjct: 1682 FTGDYSGFDT 1691


>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain

Query: 4 AYTGFET 10
AYTGF+T
Sbjct: 436 AYTGFKT 442


>sp|YL273_MIMIV|PUTATIVE ankyrin repeat protein L273|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YAGAYTGFET 10
Y G Y+ F+T
Sbjct: 420 YKGFYSNFQT 429


>sp|TNPA_BPMU|DDE-RECOMBINASE A|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 AGAYTG 7
AGAYTG
Sbjct: 411 AGAYTG 416


>sp|SIGM1_REOVL|OUTER capsid protein sigma-1|Reovirus type 1 (strain Lang)

Query: 1 YAGAYTG 7
Y G YTG
Sbjct: 446 YGGTYTG 452


>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21

Query: 1 YAGAYTGFET 10
YAG Y F T
Sbjct: 443 YAGLYKAFST 452


>sp|VP1_SV40|MAJOR capsid protein VP1|Simian virus 40 (SV40)

Query: 1 YAGAYTGFE 9
Y G YTG E
Sbjct: 221 YFGTYTGGE 229


>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)

Query: 1 YAGAYTGFE 9
Y G YTG E
Sbjct: 221 YFGTYTGGE 229


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 GAYTGFET 10
AYTGF++
Sbjct: 1042 AAYTGFDS 1049




29|SequenceR|150|141|GQAPYYAGAY

>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 1 GQAPYYAGAY 10
G APYYAG +
Sbjct: 752 GYAPYYAGVW 761


>sp|YL633_MIMIV|PUTATIVE lectin L633|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GQAPYY 6
GQAPY+
Sbjct: 134 GQAPYF 139


>sp|BP10_BPT4|BASEPLATE wedge protein gp10|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 GQAPYYAGAY 10
G PY AGA+
Sbjct: 40 GDVPYSAGAW 49


>sp|GE_CHV9D|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 9 (strain DHV)

Query: 1 GQAPYYAG 8
GQ+ YYAG
Sbjct: 563 GQSTYYAG 570


>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 4 PYYAGAY 10
PY+ GAY
Sbjct: 1945 PYHPGAY 1951


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 GQAPYYAGAY 10
GQA +Y+G +
Sbjct: 563 GQAFFYSGGF 572


>sp|G5P_BPIKE|DNA-BINDING protein G5P|Salmonella phage IKe (Bacteriophage IKe)

Query: 1 GQAPYYAGAY 10
GQ PY AG Y
Sbjct: 53 GQQPYPAGKY 62


>sp|ENV_FENV1|ENVELOPE glycoprotein|Feline endogenous virus ECE1

Query: 1 GQAPYYAGA 9
GQ PYY A
Sbjct: 405 GQGPYYLTA 413


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 GQAPYYAGAY 10
GQA +Y+G +
Sbjct: 563 GQAFFYSGGF 572


>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)

Query: 4 PYYAGAY 10
PYY GA+
Sbjct: 308 PYYTGAH 314




30|SequenceR|155|146|PFQQVGQAPY

>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 38 PFAQTGHAP 46


>sp|VP4_ROTME|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PFQQVGQAP 9
PF Q+G AP
Sbjct: 39 PFAQIGYAP 47


>sp|VP4_ROTRA|OUTER capsid protein VP4|Rotavirus A (strain RVA/Rabbit/United

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTEO|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTE1|OUTER capsid protein VP4|Rotavirus A (strain RVA/Equine/United

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTB4|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTMB|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Mouse/United

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTF1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTTU|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Monkey/United

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTBU|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTB6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTBV|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/United

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROT46|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTPY|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTP3|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROT18|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTSS|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-SEM/G3P5B[2])

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTRH|OUTER capsid protein VP4|Rotavirus A (strain RVA/Monkey/United

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTP5|OUTER capsid protein VP4|Rotavirus A (strain RVA/Pig/United

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTSH|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Monkey/South

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTS1|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-Both/G3P5B[2])

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTD9|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTF6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47


>sp|VP4_ROTCU|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 1 PFQQVGQAP 9
PF Q G AP
Sbjct: 39 PFAQTGYAP 47




31|SequenceR|160|151|PAVGTPFQQV

>sp|YR350_MIMIV|PUTATIVE ATP-dependent RNA helicase R350|Acanthamoeba polyphaga mimivirus

Query: 1 PAVGTPFQ 8
PA+ TPF+
Sbjct: 253 PAINTPFE 260


>sp|VP4_ROTB9|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 PAVGTPFQQV 10
PA+G PF ++
Sbjct: 426 PAIGEPFFEI 435


>sp|STXA_BPH30|SHIGA-LIKE toxin 1 subunit A|Bacteriophage H30

Query: 2 AVGTPFQQV 10
A+GTP Q +
Sbjct: 45 AIGTPLQTI 53


>sp|STXA_BPH19|SHIGA-LIKE toxin 1 subunit A|Enterobacteria phage H19B (Bacteriophage H19B)

Query: 2 AVGTPFQQV 10
A+GTP Q +
Sbjct: 45 AIGTPLQTI 53


>sp|STXA_BP788|SHIGA toxin subunit A|Shigella phage 7888 (Shigella sonnei

Query: 2 AVGTPFQQV 10
A+GTP Q +
Sbjct: 45 AIGTPLQTI 53


>sp|CAPSH_ADEB3|HEXON protein|Bovine adenovirus B serotype 3

Query: 1 PAVGTPFQ 8
PA+G+PF
Sbjct: 649 PALGSPFD 656


>sp|CAPSH_ADEP3|HEXON protein|Porcine adenovirus A serotype 3

Query: 1 PAVGTPF 7
PA+G+PF
Sbjct: 674 PALGSPF 680


>sp|CAPSD_OASV1|CAPSID polyprotein VP86|Ovine astrovirus 1 (OAstV-1)

Query: 1 PAVGTPF 7
PAVG PF
Sbjct: 423 PAVGQPF 429


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 PAVGTPFQQ 9
PAV TP ++
Sbjct: 943 PAVNTPMEE 951




32|SequenceR|165|156|MLVPTPAVGT

>sp|RDRP_PAV|RNA-DIRECTED RNA polymerase|Pariacoto virus (PaV)

Query: 1 MLVPTPAVG 9
LVP P VG
Sbjct: 448 FLVPEPGVG 456




33|SequenceR|170|161|QPPQNMLVPT

>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993

Query: 2 PPQNMLVP 9
PP N ++P
Sbjct: 45 PPNNQVIP 52


>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PPQNMLVPT 10
PP +++VPT
Sbjct: 81 PPLSLMVPT 89


>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PPQNMLVPT 10
PP +++VPT
Sbjct: 81 PPLSLMVPT 89


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 1 QPPQNMLVP 9
+PP+N VP
Sbjct: 265 EPPKNRSVP 273


>sp|YR526_MIMIV|PUTATIVE alpha/beta hydrolase R526|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 QPPQNMLVPT 10
+P QN+++P+
Sbjct: 248 EPNQNLMIPS 257


>sp|YO15_ADEG1|UNCHARACTERIZED protein ORF15|Fowl adenovirus A serotype 1

Query: 1 QPPQNMLV 8
+PPQN+L
Sbjct: 42 RPPQNLLA 49




34|SequenceR|175|166|RKPAIQPPQN

>sp|SH_MUMP4|SMALL hydrophobic protein|Mumps virus (strain Edingburgh 4)

Query: 3 PAIQPP 8
PAIQPP
Sbjct: 2 PAIQPP 7


>sp|SH_MUMPU|SMALL hydrophobic protein|Mumps virus genotype B (strain

Query: 3 PAIQPP 8
PAIQPP
Sbjct: 2 PAIQPP 7


>sp|CEP2_EHV2|CYTOPLASMIC envelopment protein 2|Equine herpesvirus 2 (strain 86/87)

Query: 2 KPAIQPPQN 10
+PAI PQN
Sbjct: 126 EPAISAPQN 134


>sp|SH_MUMPR|SMALL hydrophobic protein|Mumps virus (strain RW) (MuV)

Query: 3 PAIQPP 8
PAIQPP
Sbjct: 2 PAIQPP 7


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1 RKPAIQPP 8
RKPA PP
Sbjct: 782 RKPATSPP 789


>sp|SH_MUMPB|SMALL hydrophobic protein|Mumps virus (strain Belfast) (MuV)

Query: 3 PAIQPP 8
PAIQPP
Sbjct: 2 PAIQPP 7


>sp|CAPSD_CVB|CAPSID protein|Chrysanthemum virus B (CVB)

Query: 2 KPAIQPPQN 10
+PA+QPP N
Sbjct: 93 RPALQPPPN 101


>sp|SH_MUMPT|SMALL hydrophobic protein|Mumps virus (strain Takahashi) (MuV)

Query: 3 PAIQPP 8
PAIQPP
Sbjct: 2 PAIQPP 7


>sp|POL_WDSV|GAG-POL polyprotein|Walleye dermal sarcoma virus (WDSV)

Query: 5 IQPPQN 10
IQPPQN
Sbjct: 549 IQPPQN 554


>sp|SH_MUMPA|SMALL hydrophobic protein|Mumps virus (strain Matsuyama) (MuV)

Query: 3 PAIQPP 8
PAIQPP
Sbjct: 2 PAIQPP 7


>sp|SH_MUMPJ|SMALL hydrophobic protein|Mumps virus genotype A (strain

Query: 3 PAIQPP 8
PAIQPP
Sbjct: 2 PAIQPP 7


>sp|SH_MUMPK|SMALL hydrophobic protein|Mumps virus (strain Kilham) (MuV)

Query: 3 PAIQPP 8
PAIQPP
Sbjct: 2 PAIQPP 7


>sp|SH_MUMPE|SMALL hydrophobic protein|Mumps virus (strain Enders) (MuV)

Query: 3 PAIQPP 8
PAIQPP
Sbjct: 2 PAIQPP 7




35|SequenceR|180|171|ITKRERKPAI

>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 3 KRERKPA 9
KRE+KPA
Sbjct: 2955 KREKKPA 2961




36|SequenceR|185|176|PDRIRITKRE

>sp|RP147_VACCW|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Western Reserve)

Query: 1 PDRIRITK 8
P RIRITK
Sbjct: 895 PSRIRITK 902


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 1 PDRIRITK 8
P RIRITK
Sbjct: 895 PSRIRITK 902


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 1 PDRIRITK 8
P RIRITK
Sbjct: 895 PSRIRITK 902


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 PDRIRITK 8
P RIRITK
Sbjct: 895 PSRIRITK 902


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 PDRIRITK 8
P RIRITK
Sbjct: 895 PSRIRITK 902


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 1 PDRIRITK 8
P RIRITK
Sbjct: 895 PSRIRITK 902


>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 PDRIRITKR 9
PDR+RIT R
Sbjct: 334 PDRVRITLR 342


>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 PDRIRITKR 9
PDR+RIT R
Sbjct: 334 PDRVRITLR 342




37|SequenceR|190|181|KGGQNPDRIR

>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 GGQNPDRIR 10
GG +PD++R
Sbjct: 598 GGNHPDQVR 606


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 GGQNPDRIR 10
GG +PD++R
Sbjct: 598 GGNHPDQVR 606


>sp|CAPSD_TPCTV|CAPSID protein|Tomato pseudo-curly top virus (TPCTV)

Query: 1 KGGQNPDRIR 10
KG + PDRI+
Sbjct: 38 KGKRKPDRIK 47


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 2 GGQNPDRIR 10
GG+NPD ++
Sbjct: 1093 GGENPDLLK 1101


>sp|ORF7_HAPV1|UNCHARACTERIZED protein 7|Halorubrum pleomorphic virus 1 (HRPV-1)

Query: 1 KGGQNPDRI 9
+G +NPDRI
Sbjct: 5 EGPENPDRI 13


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 2 GGQNPDRIR 10
GG+NPD ++
Sbjct: 1094 GGENPDLLK 1102


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 2 GGQNPDRI 9
G +NPDRI
Sbjct: 1720 GDRNPDRI 1727


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 2 GGQNPDRI 9
G +NPDRI
Sbjct: 1719 GDRNPDRI 1726


>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58

Query: 2 GGQNPDRIR 10
GQNP IR
Sbjct: 635 AGQNPRHIR 643


>sp|DCHM_BPT4|DEOXYCYTIDYLATE 5-hydroxymethyltransferase|Enterobacteria phage T4 (Bacteriophage

Query: 3 GQNPDRIR 10
GQNPD R
Sbjct: 117 GQNPDSRR 124


>sp|DCHM_BPT2|DEOXYCYTIDYLATE 5-hydroxymethyltransferase|Enterobacteria phage T2 (Bacteriophage

Query: 3 GQNPDRIR 10
GQNPD R
Sbjct: 117 GQNPDSRR 124


>sp|DCHM_BPT6|DEOXYCYTIDYLATE 5-hydroxymethyltransferase|Enterobacteria phage T6 (Bacteriophage

Query: 3 GQNPDRIR 10
GQNPD R
Sbjct: 117 GQNPDSRR 124


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 3 GQNPDR 8
G+NPDR
Sbjct: 1932 GRNPDR 1937


>sp|Y043_NPVOP|UNCHARACTERIZED 7.1 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 GGQNPDR 8
GG +PDR
Sbjct: 56 GGDDPDR 62


>sp|VF179_IIV6|UNCHARACTERIZED protein 179R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 KGGQNPDR 8
K G NPD+
Sbjct: 44 KNGTNPDK 51


>sp|CAPSD_ADVG|CAPSID protein VP1|Aleutian mink disease parvovirus (strain

Query: 4 QNPDRIR 10
+NPDRI+
Sbjct: 616 ENPDRIK 622


>sp|NSP3_ROTGA|NON-STRUCTURAL protein 3|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)

Query: 1 KGGQNPDR 8
+GG+NP R
Sbjct: 311 RGGENPRR 318


>sp|LH3_ADES1|HEXON-INTERLACING protein LH3|Snake adenovirus serotype 1 (SnAdV-1)

Query: 2 GGQNPDRI 9
GG +PDR+
Sbjct: 105 GGDSPDRL 112


>sp|GP16_BPP22|INTERNAL virion protein gp16|Salmonella phage P22 (Bacteriophage P22)

Query: 2 GGQNPDRI 9
GG NPD I
Sbjct: 261 GGYNPDDI 268


>sp|YR403_MIMIV|UNCHARACTERIZED protein R403|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GGQNPDRI 9
GGQNP ++
Sbjct: 16 GGQNPPQL 23




38|SequenceR|195|186|EETIDKGGQN

>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)

Query: 2 ETIDKGGQN 10
+TID GG N
Sbjct: 2799 DTIDAGGSN 2807


>sp|VP5_BRD|OUTER capsid protein VP5|Broadhaven virus (BRD)

Query: 1 EETIDKGGQ 9
E+T+D GG+
Sbjct: 221 EQTVDIGGE 229


>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 EETIDKGG 8
EET D+GG
Sbjct: 736 EETEDEGG 743


>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 EETIDKGGQN 10
EET + GG N
Sbjct: 733 EETEEDGGSN 742




39|SequenceR|200|191|AGSMIEETID

>sp|YL182_MIMIV|UNCHARACTERIZED protein L182|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 SMIEETID 10
+++EETID
Sbjct: 381 NLVEETID 388




40|SequenceR|205|196|TSATRAGSMI

>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 1 TSATRAGS 8
TSATR GS
Sbjct: 21 TSATRVGS 28


>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82

Query: 2 SATRAGSMI 10
SAT +GSMI
Sbjct: 292 SATPSGSMI 300


>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51

Query: 2 SATRAGSMI 10
SAT +GSMI
Sbjct: 292 SATPSGSMI 300


>sp|CAPSD_SSVN|CAPSID protein|Sugarcane streak virus (isolate South

Query: 1 TSATRAGSMI 10
TSA RAGS +
Sbjct: 28 TSAARAGSAV 37




41|SequenceR|210|201|QPPTPTSATR

>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)

Query: 1 QPPTPTSAT 9
QPPTPT+ T
Sbjct: 38 QPPTPTAET 46


>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain

Query: 1 QPPTPTSAT 9
+PPTPT A+
Sbjct: 724 KPPTPTVAS 732


>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate

Query: 1 QPPTPTSAT 9
+PPTPT A+
Sbjct: 724 RPPTPTVAS 732


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 1 QPPTPTSA 8
QPPTP SA
Sbjct: 2712 QPPTPESA 2719


>sp|TOP2_IIV3|DNA topoisomerase 2|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 QPPTPTS 7
QPP PT+
Sbjct: 118 QPPPPTT 124


>sp|VP1_POVMP|CAPSID protein VP1|Murine polyomavirus (strain P16 small-plaque)

Query: 1 QPPTPTSATR 10
QPPTP S T
Sbjct: 60 QPPTPESLTE 69


>sp|VP1_POVMC|MAJOR capsid protein VP1|Murine polyomavirus (strain Crawford

Query: 1 QPPTPTSATR 10
QPPTP S T
Sbjct: 60 QPPTPESLTE 69


>sp|VP1_POVMA|MAJOR capsid protein VP1|Murine polyomavirus (strain A2) (MPyV)

Query: 1 QPPTPTSATR 10
QPPTP S T
Sbjct: 60 QPPTPESLTE 69


>sp|VP1_POVM3|MAJOR capsid protein VP1|Murine polyomavirus (strain A3) (MPyV)

Query: 1 QPPTPTSATR 10
QPPTP S T
Sbjct: 60 QPPTPESLTE 69


>sp|VG23_ICHVA|UNCHARACTERIZED protein ORF23|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 QPPTPTS 7
QPP PTS
Sbjct: 378 QPPAPTS 384




42|SequenceR|215|206|LGGGTQPPTP

>sp|POLG_OMV|GENOME polyprotein|Ornithogalum mosaic virus

Query: 2 GGGTQPPTP 10
GG ++PP P
Sbjct: 890 GGSSRPPAP 898


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1 LGGGTQPPTP 10
LGGG PP+P
Sbjct: 35 LGGGASPPSP 44


>sp|PP62_ASFM2|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 2 GGGTQPPTP 10
GGG PP P
Sbjct: 157 GGGNDPPVP 165


>sp|PP62_ASFP4|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 2 GGGTQPPTP 10
GGG PP P
Sbjct: 157 GGGNDPPVP 165


>sp|PP62_ASFWA|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 2 GGGTQPPTP 10
GGG PP P
Sbjct: 157 GGGNDPPVP 165


>sp|PP62_ASFB7|POLYPROTEIN pp62|African swine fever virus (strain

Query: 2 GGGTQPPTP 10
GGG PP P
Sbjct: 157 GGGNDPPVP 165


>sp|289L_IIV6|PUTATIVE Bro-N domain-containing protein 289L|Invertebrate iridescent

Query: 3 GGTQPPT 9
GGT PPT
Sbjct: 73 GGTAPPT 79


>sp|MATRX_BEFVB|MATRIX protein|Bovine ephemeral fever virus (strain

Query: 1 LGGGTQPP 8
LG G++PP
Sbjct: 187 LGNGSKPP 194


>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)

Query: 1 LGGGTQPPTP 10
L G QPPTP
Sbjct: 33 LAGLRQPPTP 42


>sp|Y066_NPVLD|UNCHARACTERIZED protein in POL 5'region|Lymantria dispar multicapsid nuclear

Query: 2 GGGTQPP 8
GGG PP
Sbjct: 97 GGGAPPP 103


>sp|FIB12_BPPZA|PRENECK appendage protein|Bacillus phage PZA (Bacteriophage PZA)

Query: 1 LGGGTQPPTP 10
LG GT P P
Sbjct: 254 LGDGTTAPNP 263


>sp|FIB12_BPPH2|PRE-NECK appendage protein|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 1 LGGGTQPPTP 10
LG GT P P
Sbjct: 254 LGDGTTAPNP 263


>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)

Query: 3 GGTQPPT 9
GGT PPT
Sbjct: 53 GGTLPPT 59


>sp|GH_SUHVR|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Rice)

Query: 1 LGGGTQPPTP 10
LG G +PP P
Sbjct: 199 LGAGLEPPGP 208


>sp|POLG_PVCV2|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 1 LGGGTQPPTP 10
LG T+P TP
Sbjct: 2159 LGYSTKPSTP 2168


>sp|PP62_ASFK5|POLYPROTEIN pp62|African swine fever virus (isolate

Query: 2 GGGTQPP 8
GGG PP
Sbjct: 157 GGGNDPP 163


>sp|POLG_PVCV1|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 1 LGGGTQPPTP 10
LG T+P TP
Sbjct: 2158 LGYSTKPSTP 2167




43|SequenceR|220|211|NAQPELGGGT

>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)

Query: 1 NAQPELG 7
NA PELG
Sbjct: 744 NASPELG 750


>sp|MVP_PVYN|P3N-PIPO polyprotein|Potato virus Y (strain N)

Query: 1 NAQPELG 7
NA PELG
Sbjct: 744 NASPELG 750


>sp|DNBI_SCMVC|MAJOR DNA-binding protein|Simian cytomegalovirus (strain Colburn)

Query: 1 NAQPELGGG 9
+++PE GGG
Sbjct: 1104 DSRPECGGG 1112


>sp|VNS1_AHSV9|NON-STRUCTURAL protein NS1|African horse sickness virus 9

Query: 4 PELGGGT 10
PEL GGT
Sbjct: 358 PELTGGT 364


>sp|VNS1_AHSV|NON-STRUCTURAL protein NS1|African horse sickness virus (AHSV)

Query: 4 PELGGGT 10
PEL GGT
Sbjct: 358 PELTGGT 364


>sp|V006_FOWPN|UNCHARACTERIZED protein FPV006/FPV255|Fowlpox virus (strain NVSL) (FPV)

Query: 3 QPELGGGT 10
QPE GG T
Sbjct: 141 QPETGGET 148


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 1 NAQPELGGGT 10
N+ PE GG T
Sbjct: 814 NSDPEHGGST 823


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 AQPELGGG 9
A+PEL GG
Sbjct: 2008 AKPELEGG 2015


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 AQPELGGG 9
A+PEL GG
Sbjct: 2008 AKPELEGG 2015


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 AQPELGGG 9
A+PEL GG
Sbjct: 1978 AKPELEGG 1985


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 AQPELGGG 9
A+PEL GG
Sbjct: 2008 AKPELEGG 2015




44|SequenceR|225|216|QPTEGNAQPE

>sp|ENV_SIVMB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate MB66)

Query: 1 QPTEGNAQPE 10
+P EGN PE
Sbjct: 199 EPLEGNKPPE 208


>sp|ACPY1_BP010|ANTI-PYCSAR protein Apyc1|Bacillus phage 010DV004

Query: 2 PTEGNAQPE 10
P EG+ +PE
Sbjct: 113 PDEGSPEPE 121


>sp|VF448_ASFWA|UNCHARACTERIZED protein M448R|African swine fever virus (isolate

Query: 1 QPTEGNAQP 9
Q T+GN QP
Sbjct: 64 QETQGNTQP 72


>sp|VF448_ASFP4|PUTATIVE RNA-ligase|African swine fever virus (isolate

Query: 1 QPTEGNAQP 9
Q T+GN QP
Sbjct: 64 QETQGNTQP 72


>sp|RDRP_TMOB|REPLICASE large subunit|Tobamovirus Ob

Query: 1 QPTEGN 6
+PTEGN
Sbjct: 611 EPTEGN 616


>sp|DNBI_SUHV|MAJOR DNA-binding protein|Suid herpesvirus 1 (SuHV-1) (Pseudorabies

Query: 2 PTEGNAQP 9
PT+G+A+P
Sbjct: 726 PTKGSAEP 733


>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41

Query: 2 PTEGNAQP 9
P +GN QP
Sbjct: 559 PLKGNGQP 566




45|SequenceR|230|221|VIVAVQPTEG

>sp|POLG_OMV|GENOME polyprotein|Ornithogalum mosaic virus

Query: 1 VIVAVQPTEG 10
++VAV+PT+G
Sbjct: 719 LLVAVEPTKG 728


>sp|POL_COYMV|POLYPROTEIN P3|Commelina yellow mottle virus (CoYMV)

Query: 1 VIVAVQPTE 9
V+V +QPTE
Sbjct: 285 VVVPMQPTE 293


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 IVAVQPTE 9
IVA QPTE
Sbjct: 1113 IVAAQPTE 1120


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 IVAVQPTE 9
I+A QPTE
Sbjct: 1114 IIAAQPTE 1121


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 IVAVQPTE 9
IVA QPTE
Sbjct: 1113 IVAGQPTE 1120


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 IVAVQPTE 9
IVA QPTE
Sbjct: 1114 IVAGQPTE 1121


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 IVAVQPTE 9
IVA QPTE
Sbjct: 1115 IVAGQPTE 1122


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 IVAVQPTE 9
IVA QPTE
Sbjct: 1115 IVAGQPTE 1122


>sp|POL_SIVSP|GAG-POL polyprotein|Simian immunodeficiency virus (isolate PBj14/BCL-3)

Query: 2 IVAVQPTE 9
IVA QPTE
Sbjct: 1101 IVAGQPTE 1108


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 IVAVQPTE 9
IVA QPTE
Sbjct: 1115 IVAGQPTE 1122


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 IVAVQPTE 9
IVA QPTE
Sbjct: 1114 IVAGQPTE 1121


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 IVAVQPTE 9
IVA QPTE
Sbjct: 1115 IVAGQPTE 1122




46|SequenceR|235|226|RDDPRVIVAV

>sp|YA2_MDBVW|UNCHARACTERIZED protein A2|Microplitis demolitor bracovirus (isolate Webb)

Query: 1 RDDPRVIVAV 10
RD+ +VIVAV
Sbjct: 37 RDEKKVIVAV 46


>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus

Query: 1 RDDPRVIVAV 10
RD P V+VA+
Sbjct: 1093 RDSPHVLVAL 1102


>sp|UL01_PSHV1|UNCHARACTERIZED protein UL-1|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 RDDPRVIV 8
RDDPR ++
Sbjct: 390 RDDPRTLL 397




47|SequenceR|240|231|IAGQSRDDPR

>sp|MCE_PBCV1|MRNA-CAPPING enzyme|Paramecium bursaria Chlorella virus 1

Query: 1 IAGQSRDD 8
+ G+SRDD
Sbjct: 31 VVGESRDD 38


>sp|VL2_OVPVD|MINOR capsid protein L2|Odocoileus virginianus papillomavirus 1 (DPV)

Query: 3 GQSRDD 8
GQSRDD
Sbjct: 437 GQSRDD 442




48|SequenceR|245|236|PRDAIIAGQS

***** No hits found ******


49|SequenceR|250|241|PGPLGPRDAI

>sp|1A_BBMV|REPLICATION protein 1a|Broad bean mottle virus

Query: 4 LGPRDA 9
LGPRDA
Sbjct: 129 LGPRDA 134


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 1 PGPLGPRD 8
P P+GPRD
Sbjct: 2637 PAPVGPRD 2644


>sp|CAPSH_ADEG1|HEXON protein|Fowl adenovirus A serotype 1

Query: 3 PLGPRDAI 10
PL PR+AI
Sbjct: 128 PLAPREAI 135


>sp|036L_FRG3G|UNCHARACTERIZED protein 036L|Frog virus 3 (isolate Goorha)

Query: 2 GPLGPRDAI 10
GP+G RD+I
Sbjct: 57 GPIGTRDSI 65


>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 GPLGPRD 8
GP+GPR+
Sbjct: 115 GPIGPRE 121


>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese

Query: 2 GPLGPRDAI 10
GP PRD I
Sbjct: 528 GPFVPRDQI 536




50|SequenceR|255|246|SPSHEPGPLG

>sp|LTP_GAHVM|LARGE tegument protein deneddylase|Gallid herpesvirus 2 (strain

Query: 1 SPSHEPGPL 9
SP++EP PL
Sbjct: 3125 SPTNEPSPL 3133


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 3 SHEPGPLG 10
SH+P PLG
Sbjct: 1179 SHQPAPLG 1186


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 2 PSHEPGPLG 10
P H PGPLG
Sbjct: 897 PWHPPGPLG 905


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 2 PSHEPGPLG 10
P H PGPLG
Sbjct: 897 PWHPPGPLG 905


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 2 PSHEPGPLG 10
P H PGPLG
Sbjct: 897 PWHPPGPLG 905


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 2 PSHEPGPLG 10
P H PGPLG
Sbjct: 897 PWHPPGPLG 905


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 2 PSHEPGPLG 10
P H PGPLG
Sbjct: 897 PWHPPGPLG 905


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 2 PSHEPGPLG 10
P H PGPLG
Sbjct: 897 PWHPPGPLG 905


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 2 PSHEPGPLG 10
P H PGPLG
Sbjct: 897 PWHPPGPLG 905


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 2 PSHEPGPLG 10
P H PGPLG
Sbjct: 897 PWHPPGPLG 905


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 2 PSHEPGPLG 10
P H PGPLG
Sbjct: 897 PWHPPGPLG 905


>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 2 PSHEPGPLG 10
P EPGP G
Sbjct: 872 PGVEPGPRG 880


>sp|GLYC_GOGV|GLYCOPROTEIN 1 reptarenavirus (isolate AlRrV1/Boa/USA/BC/2009)

Query: 4 HEPGPLG 10
HEP P G
Sbjct: 384 HEPDPFG 390


>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 SHEPGPLG 10
HEPGP G
Sbjct: 460 QHEPGPAG 467


>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus

Query: 3 SHEPGP 8
SH PGP
Sbjct: 191 SHSPGP 196


>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)

Query: 2 PSHEPGPL 9
PS EP P+
Sbjct: 494 PSEEPAPV 501




51|SequenceR|260|251|SPQSESPSHE

>sp|HEPA_PSHV1|DNA helicase/primase complex-associated protein|Psittacid herpesvirus 1

Query: 2 PQSESPSHE 10
PQ +S SHE
Sbjct: 155 PQEQSGSHE 163




52|SequenceR|265|256|TPSPSSPQSE

>sp|GH_EHV2|ENVELOPE glycoprotein H|Equine herpesvirus 2 (strain 86/87)

Query: 1 TPSPSSPQ 8
TP PS+P+
Sbjct: 25 TPYPSTPE 32


>sp|GLYCO_IHNVR|GLYCOPROTEIN hematopoietic necrosis virus (strain

Query: 2 PSPSSPQS 9
P+PS+PQS
Sbjct: 491 PTPSAPQS 498


>sp|ORF29_BPKHP|COILED-COIL domain-containing protein ORF29|Helicobacter pylori bacteriophage

Query: 3 SPSSPQSE 10
+PS+P+SE
Sbjct: 26 TPSTPESE 33


>sp|GE_CHV9D|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 9 (strain DHV)

Query: 2 PSPSSP 7
PSPSSP
Sbjct: 499 PSPSSP 504


>sp|ANT_BPP1|ANTIREPRESSOR protein 1|Escherichia phage P1 (Bacteriophage P1)

Query: 1 TPSPSSPQS 9
+P+PS PQ+
Sbjct: 207 SPAPSIPQT 215




53|SequenceR|270|261|PSPSPTPSPS

>sp|NCAP_QRFVE|NUCLEOPROTEIN virus (isolate QrfV/Tick/Afghanistan/EG_T_377/1968) (QRFV)

Query: 1 PSPSPTPSPS 10
P+PS P P+
Sbjct: 5 PAPSTAPKPT 14


>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 PSPSPTPSP 9
P PS TPSP
Sbjct: 352 PRPSRTPSP 360


>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 PSPSPTPSP 9
P PS TPSP
Sbjct: 352 PRPSRTPSP 360


>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 PSPSPTPSP 9
P PS TPSP
Sbjct: 352 PRPSRTPSP 360


>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2

Query: 1 PSPSPTPS 8
PSPSPT S
Sbjct: 27 PSPSPTAS 34


>sp|UB403_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus

Query: 1 PSPSPTPSPS 10
P P P P P+
Sbjct: 6 PCPGPGPVPT 15


>sp|RDRP_TNVD|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain D)

Query: 1 PSPSPTP 7
P+P PTP
Sbjct: 279 PTPKPTP 285


>sp|DGTPH_BPPMB|DATP/DGTP diphosphohydrolase|Salmonella phage PMBT28

Query: 1 PSPSPTPSPS 10
P P+P+PS S
Sbjct: 127 PVPAPSPSRS 136


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 2 SPSPTPSP 9
+P P PSP
Sbjct: 700 APIPVPSP 707


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 SPSPTPSP 9
+P P PSP
Sbjct: 700 APIPVPSP 707


>sp|RDRP_BOTVF|RNA replication protein|Botrytis virus F (isolate Botrytis

Query: 1 PSPSPTPSPS 10
PSP+PTPS +
Sbjct: 939 PSPTPTPSDA 948


>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)

Query: 2 SPSPTPSPS 10
SPSPTP+P+
Sbjct: 416 SPSPTPNPT 424


>sp|VG66_ICHVA|UNCHARACTERIZED protein ORF66|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 PSPSPTPSP 9
P+P PT P
Sbjct: 36 PAPKPTTQP 44


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 PSPSPTPS 8
PSP P P+
Sbjct: 214 PSPGPMPA 221




54|SequenceR|275|266|GPELVPSPSP

>sp|L_SHRV|RNA-DIRECTED RNA polymerase L|Snakehead rhabdovirus (SHRV)

Query: 2 PELVPSPS 9
P++VPSPS
Sbjct: 219 PDMVPSPS 226


>sp|PG097_VARV|PROTEIN OPG097|Variola virus

Query: 2 PELVPSPSP 10
P L PSP P
Sbjct: 45 PRLQPSPPP 53


>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 PELVPSPSP 10
P L PSP P
Sbjct: 45 PRLQPSPPP 53


>sp|HEMA_I85A7|HEMAGGLUTININ A virus (strain A/Ruddy

Query: 2 PELVPSP 8
PEL PSP
Sbjct: 61 PELCPSP 67


>sp|HEMA_I80A8|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/833/1980

Query: 2 PELVPSP 8
PEL PSP
Sbjct: 61 PELCPSP 67


>sp|HEMA_I79A7|HEMAGGLUTININ A virus (strain A/Grey

Query: 2 PELVPSP 8
PEL PSP
Sbjct: 61 PELCPSP 67


>sp|HEMA_I77AG|HEMAGGLUTININ A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 2 PELVPSP 8
PEL PSP
Sbjct: 61 PELCPSP 67


>sp|HEMA_I76AK|HEMAGGLUTININ A virus (strain A/Duck/New

Query: 2 PELVPSP 8
PEL PSP
Sbjct: 61 PELCPSP 67


>sp|HEMA_I76A1|HEMAGGLUTININ A virus (strain A/Duck/Alberta/28/1976

Query: 2 PELVPSP 8
PEL PSP
Sbjct: 61 PELCPSP 67


>sp|HEMA_I75A4|HEMAGGLUTININ A virus (strain A/Chicken/Alabama/1/1975

Query: 2 PELVPSP 8
PEL PSP
Sbjct: 61 PELCPSP 67


>sp|HEMA_I56A1|HEMAGGLUTININ A virus (strain A/Duck/Czechoslovakia/1956

Query: 2 PELVPSP 8
PEL PSP
Sbjct: 61 PELCPSP 67


>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 GPELVPSPS 9
GP PSPS
Sbjct: 655 GPRRTPSPS 663


>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus

Query: 2 PELVPSPSP 10
PE++PS P
Sbjct: 193 PEIIPSSIP 201


>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 PELVPSPSP 10
PE++PS P
Sbjct: 193 PEIIPSSIP 201


>sp|PG085_VACCW|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Western Reserve)

Query: 2 PELVPSPSP 10
PE++PS P
Sbjct: 193 PEIIPSSIP 201


>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)

Query: 2 PELVPSPSP 10
PE++PS P
Sbjct: 193 PEIIPSSIP 201


>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 PELVPSPSP 10
PE++PS P
Sbjct: 193 PEIIPSSIP 201


>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)

Query: 2 PELVPSPSP 10
PE++PS P
Sbjct: 193 PEIIPSSIP 201


>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)

Query: 2 PELVPSPSP 10
PE++PS P
Sbjct: 193 PEIIPSSIP 201


>sp|GAG_VILVK|GAG polyprotein|Maedi visna virus (strain KV1772)

Query: 1 GPELVPSPSP 10
GP +VPS P
Sbjct: 431 GPRVVPSAPP 440


>sp|GAG_VILV2|GAG polyprotein|Maedi visna virus (strain 1514

Query: 1 GPELVPSPSP 10
GP +VPS P
Sbjct: 431 GPRVVPSAPP 440


>sp|GAG_VILV1|GAG polyprotein|Maedi visna virus (strain 1514

Query: 1 GPELVPSPSP 10
GP +VPS P
Sbjct: 431 GPRVVPSAPP 440


>sp|GAG_VILV|GAG polyprotein|Maedi visna virus (strain 1514)

Query: 1 GPELVPSPSP 10
GP +VPS P
Sbjct: 431 GPRVVPSAPP 440


>sp|077L_FRG3G|LCDV1 orf2-like protein|Frog virus 3 (isolate Goorha)

Query: 1 GPELVPSPSP 10
G +VP+PSP
Sbjct: 64 GRRVVPAPSP 73


>sp|GAG_OMVVS|GAG polyprotein|Ovine maedi visna related virus

Query: 1 GPELVPSPSP 10
GP +VPS P
Sbjct: 435 GPRVVPSAPP 444


>sp|VF179_IIV6|UNCHARACTERIZED protein 179R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 PELVPSPSP 10
P L+P P P
Sbjct: 565 PYLIPKPIP 573


>sp|TAPFS_BPMU|PROBABLE tail assembly protein FS-gp41|Escherichia phage Mu (Bacteriophage

Query: 1 GPELVPSPS 9
GP LV SPS
Sbjct: 72 GPVLVSSPS 80


>sp|NS1AB_MASV1|NON-STRUCTURAL polyprotein 1AB|Mink astrovirus 1 (MAstV-1)

Query: 1 GPELVPSPS 9
GP+L+P P+
Sbjct: 1291 GPDLMPVPT 1299


>sp|VG13_BPML5|GENE 13 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 PELVPSP 8
PEL PSP
Sbjct: 8 PELAPSP 14


>sp|POL2_BAMMN|GENOME polyprotein 2|Barley mild mosaic virus (strain

Query: 2 PELVPSPSP 10
PE+V SP P
Sbjct: 169 PEIVSSPVP 177


>sp|VG13_BPMD2|GENE 13 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 PELVPSP 8
PEL PSP
Sbjct: 8 PELAPSP 14


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1 GPELVPSPSP 10
PE+V +PSP
Sbjct: 1689 APEVVATPSP 1698


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 3 ELVPSPSP 10
EL+P P P
Sbjct: 142 ELIPKPEP 149


>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GPELVPSPSP 10
GP +V +P P
Sbjct: 570 GPAVVAAPGP 579


>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 GPELVPSPSP 10
GP +V +P P
Sbjct: 570 GPAVVAAPGP 579


>sp|POL2_BAMMA|GENOME polyprotein 2|Barley mild mosaic virus (strain

Query: 2 PELVPSPSP 10
PE+V SP P
Sbjct: 169 PEIVASPIP 177


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 3 ELVPSPSP 10
EL+P P P
Sbjct: 142 ELIPKPEP 149


>sp|POL2_BAMMU|GENOME polyprotein 2|Barley mild mosaic virus (strain

Query: 2 PELVPSPSP 10
PE+V SP P
Sbjct: 169 PEIVASPVP 177


>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 3 ELVPSPSP 10
EL+P P P
Sbjct: 143 ELIPKPEP 150


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 3 ELVPSPSP 10
EL+P P P
Sbjct: 143 ELIPKPEP 150


>sp|PHOSP_SHRV|PHOSPHOPROTEIN rhabdovirus (SHRV)

Query: 1 GPELVPSPS 9
G ELV SPS
Sbjct: 8 GEELVSSPS 16


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 GPELVPSPSP 10
GP+L PSP
Sbjct: 440 GPQLPRGPSP 449


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 3 ELVPSPSP 10
E++P P P
Sbjct: 142 EMIPKPEP 149




55|SequenceR|280|271|LNPESGPELV

>sp|L_PIRVV|RNA-DIRECTED RNA polymerase L|Pirital mammarenavirus (isolate

Query: 1 LNPESGPEL 9
+NP+S PEL
Sbjct: 727 VNPDSTPEL 735


>sp|POLN_ELV|NON-STRUCTURAL replication polyprotein|Erysimum latent virus (ELV)

Query: 1 LNPESGPELV 10
LNP +GPEL+
Sbjct: 411 LNPLTGPELL 420


>sp|OX2V_HHV6U|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6A (strain

Query: 1 LNPESGPELV 10
L+PE+ P L+
Sbjct: 21 LHPETSPSLI 30


>sp|YL415_MIMIV|PUTATIVE FNIP repeat-containing protein L415|Acanthamoeba polyphaga

Query: 1 LNPESGPELV 10
+NPE P++V
Sbjct: 128 INPEEIPDIV 137


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1 LNPESGPELV 10
+NPES EL+
Sbjct: 1382 INPESTLELI 1391


>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2

Query: 1 LNPESGPEL 9
L+P+SG EL
Sbjct: 683 LDPQSGEEL 691


>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5

Query: 1 LNPESGPEL 9
L+P+SG EL
Sbjct: 683 LDPQSGEEL 691


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 3 PESGPE 8
P+SGPE
Sbjct: 2374 PDSGPE 2379




56|SequenceR|285|276|ISLVALNPES

>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 2 SLVALNPES 10
SL+ALNP +
Sbjct: 292 SLIALNPSA 300




57|SequenceR|290|281|MTDGPISLVA

>sp|NS1AB_OASV1|NON-STRUCTURAL polyprotein 1AB|Ovine astrovirus 1 (OAstV-1)

Query: 1 MTDGPISLVA 10
+TDGPI + A
Sbjct: 503 ITDGPIVMTA 512


>sp|NS1A_OASV1|NON-STRUCTURAL polyprotein 1A|Ovine astrovirus 1 (OAstV-1)

Query: 1 MTDGPISLVA 10
+TDGPI + A
Sbjct: 503 ITDGPIVMTA 512


>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge

Query: 1 MTDGPIS 7
MTDGP S
Sbjct: 241 MTDGPAS 247


>sp|MVP_PZSVT|MOVEMENT protein|Pelargonium zonate spot virus (isolate

Query: 2 TDGPISLV 9
T GP+SLV
Sbjct: 288 TGGPVSLV 295




58|SequenceR|295|286|MQITTMTDGP

>sp|DARB_BPP1|DEFENSE against restriction protein B|Escherichia phage P1 (Bacteriophage

Query: 3 ITTMTDGP 10
+ T+TDGP
Sbjct: 638 LATLTDGP 645


>sp|RIR1_IIV6|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 QITTMTDG 9
+ITTM DG
Sbjct: 519 KITTMPDG 526


>sp|S1_BPMU|TAIL fiber protein S|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 MQITTMTDGP 10
+Q+T+ TD P
Sbjct: 120 VQLTSATDSP 129




59|SequenceR|300|291|SEEVSMQITT

***** No hits found ******


60|SequenceR|305|296|RSIPTSEEVS

>sp|POL2_RCMV|RNA2 polyprotein|Red clover mottle virus (RCMV)

Query: 2 SIPTSEEVS 10
++PTS+E+S
Sbjct: 325 NVPTSDEIS 333


>sp|RDRP_TMGMV|REPLICASE large subunit|Tobacco mild green mosaic virus

Query: 4 PTSEEVS 10
PTSEEV+
Sbjct: 634 PTSEEVN 640




61|SequenceR|310|301|PEGTERSIPT

>sp|VG46_ICHVA|PROBABLE major glycoprotein|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 PEGTERSIP 9
P+G R+IP
Sbjct: 678 PDGVNRTIP 686


>sp|POL2_BPMV|RNA2 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 1 PEGTERSI 8
P+GT RS+
Sbjct: 649 PQGTSRSV 656




62|SequenceR|315|306|PSLRYPEGTE

>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2 SLRYPEGT 9
SL YPEGT
Sbjct: 1630 SLDYPEGT 1637


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 1 PSLRYPEGTE 10
P YP+G E
Sbjct: 321 PEFEYPDGVE 330


>sp|NCAP_BEFVB|NUCLEOPROTEIN ephemeral fever virus (strain

Query: 1 PSLRYPEG 8
P+LR P+G
Sbjct: 36 PTLRVPQG 43


>sp|SIGM1_REOVD|OUTER capsid protein sigma-1|Reovirus type 3 (strain Dearing)

Query: 1 PSLRYP 6
P+LRYP
Sbjct: 294 PNLRYP 299


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 PSLRYPEGT 9
P L YP GT
Sbjct: 2743 PDLIYPTGT 2751


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 3 LRYPEGTE 10
+RYPE E
Sbjct: 1391 IRYPESNE 1398


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2 SLRYPEGT 9
SL YP GT
Sbjct: 1631 SLDYPRGT 1638


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 2 SLRYPEGT 9
SL YP GT
Sbjct: 1631 SLDYPRGT 1638


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 2 SLRYPEGT 9
SL YP GT
Sbjct: 1631 SLDYPRGT 1638


>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36

Query: 3 LRYPEGTE 10
+RYP+G E
Sbjct: 493 VRYPKGVE 500


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 2 SLRYPEGT 9
SL YP GT
Sbjct: 1631 SLDYPRGT 1638


>sp|STP_SHV2C|SAIMIRI transformation-associated protein|Saimiriine herpesvirus 2

Query: 1 PSLRYP 6
P+LRYP
Sbjct: 5 PNLRYP 10


>sp|RDRP_SCV23|RNA-DIRECTED RNA polymerase|Saccharomyces 23S RNA narnavirus (ScNV-23S)

Query: 3 LRYPEGTE 10
L YP+G+E
Sbjct: 441 LHYPDGSE 448




63|SequenceR|320|311|LPTPEPSLRY

>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)

Query: 2 PTPEPSLRY 10
PTP+P++R+
Sbjct: 86 PTPKPAVRF 94


>sp|NSP4_WTV|NON-STRUCTURAL protein 4|Wound tumor virus (WTV)

Query: 2 PTPEPSLRY 10
PTP SL+Y
Sbjct: 218 PTPSVSLKY 226


>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 TPEPSLRY 10
TPEP +RY
Sbjct: 128 TPEPGVRY 135


>sp|DEPOL_BPKNT|DEPOLYMERASE, capsule K1-specific|Klebsiella phage NTUH-K2044-K1-1 (Bacteriophage

Query: 1 LPTPEPSL 8
+PTP P L
Sbjct: 622 VPTPNPDL 629


>sp|DEPOL_BPK71|DEPOLYMERASE, capsule K1-specific|Klebsiella phage KpV71 (Bacteriophage KpV71)

Query: 1 LPTPEPSL 8
+PTP P L
Sbjct: 622 VPTPNPDL 629


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1 LPTPEPSLR 9
LP P+P+ R
Sbjct: 752 LPAPKPATR 760


>sp|Y016_OSHVF|UNCHARACTERIZED protein ORF16|Ostreid herpesvirus 1 (isolate France)

Query: 2 PTPEPSLRY 10
P P+P+L Y
Sbjct: 15 PNPDPALHY 23


>sp|VG36_ICHVA|UNCHARACTERIZED protein ORF36|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 PTPEPSLR 9
PTPEP+++
Sbjct: 121 PTPEPAVK 128


>sp|POLS_MIDDV|STRUCTURAL polyprotein|Middelburg virus

Query: 1 LPTPEPSLRY 10
LP PE L Y
Sbjct: 654 LPVPEEGLEY 663




64|SequenceR|325|316|LIPEALPTPE

>sp|VP5_LDCPR|PUTATIVE structural protein VP5|Lymantria dispar cypovirus 1 (isolate

Query: 1 LIPEALPTPE 10
L+ +A+PTPE
Sbjct: 44 LVKKAIPTPE 53


>sp|1A_CMVQ|REPLICATION protein 1a|Cucumber mosaic virus (strain Q)

Query: 2 IPEALPTP 9
IPE PTP
Sbjct: 547 IPEVSPTP 554


>sp|TMP_BPDP1|TAPE measure protein|Pneumococcus phage Dp-1 (Bacteriophage Dp-1)

Query: 2 IPEALPTPE 10
+PE LP P+
Sbjct: 1064 LPETLPAPD 1072


>sp|CAPSD_TTVT1|CAPSID protein|Torque teno canis virus (isolate

Query: 1 LIPEALPTPE 10
LIP PTPE
Sbjct: 503 LIPPGAPTPE 512


>sp|VNS5_MSTV|NON-STRUCTURAL protein NS5|Maize stripe virus (MStV)

Query: 1 LIPEALPTPE 10
L+P A+P P+
Sbjct: 290 LLPTAIPVPD 299


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 2 IPEALPTPE 10
+ E+LPTPE
Sbjct: 1706 VVESLPTPE 1714




65|SequenceR|330|321|TVEVELIPEA

>sp|PKG6_BPPRD|PACKAGING efficiency factor P6|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 2 VEVELIPEA 10
VEVE +PEA
Sbjct: 121 VEVEAMPEA 129




66|SequenceR|335|326|VPKSLTVEVE

>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 VPKSLTVEV 9
+PK LTVE+
Sbjct: 1314 IPKVLTVEL 1322


>sp|PG148_VACCW|DNA polymerase processivity factor component|Vaccinia virus (strain

Query: 1 VPKSLTVEVE 10
+PK L +E+E
Sbjct: 162 IPKYLEIEIE 171


>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain

Query: 1 VPKSLTVEVE 10
+PK L +E+E
Sbjct: 162 IPKYLEIEIE 171


>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain

Query: 1 VPKSLTVEVE 10
+PK L +E+E
Sbjct: 162 IPKYLEIEIE 171


>sp|VME1_WBV24|MEMBRANE protein|White bream virus (isolate Blicca

Query: 2 PKSLTVEV 9
PK LTV+V
Sbjct: 201 PKKLTVDV 208


>sp|CPRT_SBWMN|84 kDa readthrough protein|Soil-borne wheat mosaic virus (strain

Query: 2 PKSLTVEVE 10
PK++TVE E
Sbjct: 241 PKAVTVEFE 249


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 1 VPKSLTVEV 9
+PK LTVE+
Sbjct: 1314 IPKVLTVEL 1322


>sp|VG52_ALHV1|UNCHARACTERIZED gene 52 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 PKSLTVE 8
PK+LTVE
Sbjct: 3 PKNLTVE 9




67|SequenceR|340|331|FESEPVPKSL

>sp|YL788_MIMIV|PUTATIVE BTB/POZ domain-containing protein L788|Acanthamoeba polyphaga

Query: 5 PVPKSL 10
PVPKSL
Sbjct: 215 PVPKSL 220


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 4 EPVPKSL 10
EPVPK L
Sbjct: 212 EPVPKEL 218




68|SequenceR|345|336|LPSSSFESEP

>sp|PHOSP_SVCV|PHOSPHOPROTEIN viremia of carp virus

Query: 1 LPSSSFESEP 10
LP+ S+E EP
Sbjct: 97 LPTVSWEEEP 106




69|SequenceR|350|341|PTPAQLPSSS

>sp|GP2_EHV1D|GLYCOPROTEIN gp2|Equine herpesvirus 1 (strain Kentucky

Query: 1 PTPAQLPSS 9
PTP QLP+S
Sbjct: 253 PTPTQLPTS 261


>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)

Query: 1 PTPAQLPS 8
PTPA LPS
Sbjct: 804 PTPATLPS 811


>sp|L_BDVV|RNA-DIRECTED RNA polymerase L|Borna disease virus (strain V)

Query: 1 PTPAQLPS 8
PTPA LPS
Sbjct: 804 PTPATLPS 811


>sp|VP1_AQRVG|OUTER capsid protein VP1|Aquareovirus G (isolate American grass

Query: 1 PTPAQLP 7
PTPA+LP
Sbjct: 187 PTPARLP 193




70|SequenceR|355|346|THSALPTPAQ

>sp|AGNO_POVJC|AGNOPROTEIN polyomavirus (JCPyV) (JCV)

Query: 1 THSALPTP 8
T+SALP P
Sbjct: 61 TYSALPEP 68


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 1 THSALPT 7
TH+ALPT
Sbjct: 562 THAALPT 568


>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 THSALPTPAQ 10
T S+LPTPA
Sbjct: 2895 TPSSLPTPAD 2904


>sp|POLN_EPMV|NON-STRUCTURAL replication polyprotein|Eggplant mosaic virus

Query: 1 THSALPTP 8
+HS LPTP
Sbjct: 481 SHSLLPTP 488




71|SequenceR|360|351|EHIEVTHSAL

>sp|RIR2_EHV4|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Equine herpesvirus 4 (strain 1942)

Query: 1 EHIEVTHS 8
E IEVTHS
Sbjct: 104 ESIEVTHS 111


>sp|RIR2_EHV1B|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Equine herpesvirus 1 (strain Ab4p)

Query: 1 EHIEVTHS 8
E IEVTHS
Sbjct: 105 ESIEVTHS 112




72|SequenceR|365|356|VMGNPEHIEV

>sp|049R_IIV3|UNCHARACTERIZED protein 049R|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 GNPEHIE 9
GNPEH E
Sbjct: 60 GNPEHYE 66


>sp|YL200_MIMIV|UNCHARACTERIZED protein L200|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VMGNPEH 7
+ GNPEH
Sbjct: 147 INGNPEH 153


>sp|Y072_AFV1Y|UNCHARACTERIZED protein ORF72|Acidianus filamentous virus 1 (isolate

Query: 1 VMGNPEHIE 9
V NPE+IE
Sbjct: 49 VKANPEYIE 57


>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry

Query: 1 VMGNPEH 7
+MG PEH
Sbjct: 2330 IMGYPEH 2336


>sp|DPOL_ADECT|DNA polymerase|Canine adenovirus serotype 2 (strain

Query: 3 GNPEHIEV 10
GNP IEV
Sbjct: 353 GNPRFIEV 360


>sp|POLG_PVCV1|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 4 NPEHIEV 10
NPEH+++
Sbjct: 1394 NPEHLQL 1400


>sp|P1_BPPH6|MAJOR inner protein P1|Pseudomonas phage phi6 (Bacteriophage phi-6)

Query: 2 MGNPEHIEV 10
MG P H+ V
Sbjct: 352 MGQPSHVVV 360


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 NPEHIEV 10
NP H+EV
Sbjct: 330 NPYHVEV 336


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 NPEHIEV 10
NP H+EV
Sbjct: 330 NPYHVEV 336


>sp|POLG_PVCV2|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 4 NPEHIEV 10
NPEH+++
Sbjct: 1395 NPEHLQL 1401


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 VMGNPEHIE 9
V GNPE ++
Sbjct: 2649 VRGNPERVK 2657


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 VMGNPEHIE 9
V GNPE ++
Sbjct: 2648 VRGNPERVK 2656


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 VMGNPEHIE 9
V GNPE ++
Sbjct: 2619 VRGNPERVK 2627


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 VMGNPEHIE 9
V GNPE ++
Sbjct: 2649 VRGNPERVK 2657




73|SequenceR|370|361|LDESPVMGNP

>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 1 LDESPVM 7
LDESP+M
Sbjct: 1940 LDESPLM 1946


>sp|SCAFB_BPG4|INTERNAL scaffolding protein B|Escherichia phage G4 (Bacteriophage G4)

Query: 1 LDESPVMGNP 10
++ SPV GNP
Sbjct: 31 INGSPVSGNP 40




74|SequenceR|375|366|EVEPELDESP

>sp|MATRX_NIPAV|MATRIX protein|Nipah virus

Query: 1 EVEPELDES 9
+VEPE+DE+
Sbjct: 32 KVEPEIDEN 40


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 EVEPELDE 8
E++P+LDE
Sbjct: 1874 EIQPKLDE 1881


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 EVEPELDE 8
E++P+LDE
Sbjct: 1874 EIQPKLDE 1881


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 1 EVEPELDESP 10
+V+P+L+ESP
Sbjct: 1676 DVQPQLEESP 1685


>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 EVEPELDESP 10
E +PEL E P
Sbjct: 52 EFDPELSEPP 61


>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate

Query: 1 EVEPELDESP 10
+V+P+LD +P
Sbjct: 2428 DVKPKLDNTP 2437


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 EVEPELD 7
E+EP+LD
Sbjct: 1868 EIEPKLD 1874


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 EVEPELD 7
E+EP+LD
Sbjct: 1866 EIEPKLD 1872


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 EVEPELD 7
E+EP+LD
Sbjct: 1862 EIEPKLD 1868


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 EVEPELD 7
E+EP+LD
Sbjct: 1868 EIEPKLD 1874


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 EVEPELD 7
E+EP+LD
Sbjct: 1866 EIEPKLD 1872


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 EVEPELD 7
E+EP+LD
Sbjct: 1862 EIEPKLD 1868


>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 EVEPELDE 8
+VEPE+D+
Sbjct: 32 KVEPEIDK 39


>sp|VG01_ICHVA|UNCHARACTERIZED protein ORF1|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 EVEPELDESP 10
EVE E DE P
Sbjct: 79 EVESEADEDP 88


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 2 VEPELDE 8
+EP+LDE
Sbjct: 460 IEPQLDE 466


>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 1 EVEPELDESP 10
+V+P+LD SP
Sbjct: 1492 DVKPKLDLSP 1501


>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)

Query: 2 VEPELDE 8
+EP+LDE
Sbjct: 460 IEPQLDE 466


>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)

Query: 2 VEPELDE 8
+EP+LDE
Sbjct: 460 IEPQLDE 466


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 2 VEPELDE 8
+EP+LDE
Sbjct: 460 IEPQLDE 466




75|SequenceR|380|371|LEPSSEVEPE

>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 LEPSSEVEPE 10
LEP+ VEP+
Sbjct: 831 LEPADYVEPK 840


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 LEPSSEVEPE 10
LEP+ E PE
Sbjct: 798 LEPTKEHSPE 807


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 LEPSSEVEPE 10
LEP+ E PE
Sbjct: 798 LEPTKEHSPE 807


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 3 PSSEVEPE 10
PSSE +PE
Sbjct: 4169 PSSEKDPE 4176


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 3 PSSEVEPE 10
PSSE +PE
Sbjct: 4169 PSSEKDPE 4176


>sp|SIGM1_REOVL|OUTER capsid protein sigma-1|Reovirus type 1 (strain Lang)

Query: 2 EPSSEVEP 9
EPSS ++P
Sbjct: 401 EPSSTIDP 408


>sp|1A_OLV2I|REPLICATION protein 1a|Olive latent virus 2 (isolate

Query: 1 LEPSSEVE 8
LEP SEVE
Sbjct: 454 LEPVSEVE 461


>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38

Query: 2 EPSSEVEPE 10
EPS+ V PE
Sbjct: 219 EPSTSVSPE 227




76|SequenceR|385|376|APPPALEPSS

>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor

Query: 1 APPPALEPS 9
AP P++EP+
Sbjct: 630 APTPSVEPT 638


>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor

Query: 1 APPPALEPS 9
AP P++EP+
Sbjct: 630 APTPSVEPT 638


>sp|RAP94_VACCW|RNA polymerase-associated transcription-specificity factor

Query: 1 APPPALEPS 9
AP P++EP+
Sbjct: 630 APTPSVEPT 638


>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor

Query: 1 APPPALEPS 9
AP P++EP+
Sbjct: 630 APTPSVEPT 638


>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor

Query: 1 APPPALEPS 9
AP P++EP+
Sbjct: 630 APTPSVEPT 638


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 2 PPPALEPS 9
PPP ++P+
Sbjct: 2840 PPPVIQPA 2847


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 2 PPPALEPS 9
PPP ++P+
Sbjct: 2825 PPPVIQPA 2832


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 2 PPPALEPS 9
PPP ++P+
Sbjct: 2841 PPPVIQPA 2848


>sp|Y023_OSHVF|UNCHARACTERIZED protein ORF23|Ostreid herpesvirus 1 (isolate France)

Query: 3 PPALEPSS 10
PPA PSS
Sbjct: 1192 PPATRPSS 1199


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2 PPPALEP 8
PPP LEP
Sbjct: 1843 PPPTLEP 1849




77|SequenceR|390|381|SESPCAPPPA

>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70

Query: 1 SESPCAPPPA 10
++SPCA PP
Sbjct: 95 NKSPCAKPPG 104


>sp|ORFB_ELHVK|PROTEIN ORF B|Elephantid herpesvirus 1 (isolate Asian

Query: 5 CAPPPA 10
C PPPA
Sbjct: 305 CRPPPA 310


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 ESPCAP 7
E+PCAP
Sbjct: 1117 ETPCAP 1122


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 ESPCAP 7
E+PCAP
Sbjct: 1117 ETPCAP 1122


>sp|FUS_NPVGM|MAJOR envelope glycoprotein|Galleria mellonella nuclear polyhedrosis

Query: 4 PCAPPPA 10
PC PPA
Sbjct: 288 PCTNPPA 294


>sp|FUS_NPVAC|MAJOR envelope glycoprotein|Autographa californica nuclear polyhedrosis

Query: 4 PCAPPPA 10
PC PPA
Sbjct: 371 PCTNPPA 377


>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54

Query: 4 PCAPPP 9
PC PPP
Sbjct: 236 PCTPPP 241


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 ESPCAP 7
E+PCAP
Sbjct: 1117 ETPCAP 1122


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 ESPCAP 7
E+PCAP
Sbjct: 1117 ETPCAP 1122


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 ESPCAP 7
E+PCAP
Sbjct: 1117 ETPCAP 1122


>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)

Query: 3 SPCAPPPA 10
+PC+PP A
Sbjct: 1122 APCSPPEA 1129


>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)

Query: 4 PCAPPPA 10
PCAP P
Sbjct: 364 PCAPIPG 370


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 SESPCAPPPA 10
+ PCAP PA
Sbjct: 2066 TTGPCAPSPA 2075


>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain

Query: 3 SPCAPPP 9
S C PPP
Sbjct: 119 SECLPPP 125


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 PCAPPPA 10
PC P PA
Sbjct: 446 PCGPNPA 452


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 SESPCAPPP 9
+E PC P P
Sbjct: 2070 TEGPCVPKP 2078


>sp|Z_PARVP|RING finger protein Z|Parana mammarenavirus (isolate

Query: 2 ESPCAPP 8
ESP APP
Sbjct: 86 ESPSAPP 92


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 SESPCAPPP 9
+E PC P P
Sbjct: 2070 TEGPCVPKP 2078




78|SequenceR|395|386|AIPVPSESPC

>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann

Query: 1 AIPVPSESPC 10
+PVPSE C
Sbjct: 474 GLPVPSEMDC 483


>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)

Query: 1 AIPVPSESPC 10
+PVPSE C
Sbjct: 474 GLPVPSEMDC 483


>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 1 AIPVPSESPC 10
+PVPSE C
Sbjct: 474 GLPVPSEMDC 483


>sp|ENV_IPMAE|ENVELOPE glycoprotein|Mouse intracisternal a-particle MIAE (IAP-MIAE)

Query: 2 IPVPSESP 9
IPVP E+P
Sbjct: 345 IPVPVETP 352


>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5 PSESPC 10
PSE PC
Sbjct: 195 PSEEPC 200


>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 PSESPC 10
PSE PC
Sbjct: 195 PSEEPC 200


>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5 PSESPC 10
PSE PC
Sbjct: 195 PSEEPC 200


>sp|RDRP_CLBVS|RNA replication polyprotein|Citrus leaf blotch virus (isolate

Query: 2 IPVPSESPC 10
IP PS+ C
Sbjct: 686 IPTPSDGNC 694




79|SequenceR|400|391|PQATPAIPVP

>sp|Y457_ATV|TNPB-LIKE protein ORF457|Acidianus two-tailed virus (ATV)

Query: 1 PQATPAIP 8
P +TPAIP
Sbjct: 16 PTSTPAIP 23


>sp|CAPSD_AHV2H|CAPSID protein|Atkinsonella hypoxylon virus (isolate 2H)

Query: 1 PQATPAIPVP 10
P TP +PVP
Sbjct: 49 PHPTPNVPVP 58


>sp|RIR1_MUHVS|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Murid herpesvirus 1 (strain

Query: 2 QATPAIPVP 10
QATP+ P+P
Sbjct: 239 QATPSTPIP 247


>sp|VNS2_AQRVC|NON-STRUCTURAL protein 2|Aquareovirus C (isolate Golden shiner/USA/GSRV/1977)

Query: 1 PQATPAIPV 9
P+ TPAIPV
Sbjct: 315 PELTPAIPV 323


>sp|SF33K_ADE05|PROTEIN 33K|Human adenovirus C serotype 5

Query: 1 PQATPAIPV 9
PQA PA+PV
Sbjct: 83 PQAPPALPV 91


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 QATPAIPVP 10
Q +PAIP+P
Sbjct: 2989 QQSPAIPLP 2997


>sp|SF33K_ADE02|PROTEIN 33K|Human adenovirus C serotype 2

Query: 1 PQATPAIPV 9
PQA PA+PV
Sbjct: 82 PQAPPALPV 90


>sp|PKG2_ADE05|PACKAGING protein 2|Human adenovirus C serotype 5

Query: 1 PQATPAIPV 9
PQA PA+PV
Sbjct: 83 PQAPPALPV 91


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 2 QATPAIPVP 10
Q +PAIP+P
Sbjct: 2962 QQSPAIPLP 2970


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 2 QATPAIPVP 10
Q +PAIP+P
Sbjct: 2967 QQSPAIPLP 2975


>sp|PKG2_ADE02|PACKAGING protein 2|Human adenovirus C serotype 2

Query: 1 PQATPAIPV 9
PQA PA+PV
Sbjct: 82 PQAPPALPV 90


>sp|VP8_MYRV9|UNCHARACTERIZED protein VP8|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 1 PQATPAIPVP 10
P+A AIPVP
Sbjct: 284 PEAFLAIPVP 293




80|SequenceR|405|396|NLLEEPQATP

>sp|NS1_AEDEV|INITIATOR protein NS1|Aedes densonucleosis virus (strain GKV

Query: 2 LLEEPQATP 10
L EEP TP
Sbjct: 667 LFEEPMITP 675




81|SequenceR|410|401|PSPAGNLLEE

>sp|ITP_EHV2|INNER tegument protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 PSPAGNLLE 9
P+PA NLLE
Sbjct: 114 PAPANNLLE 122


>sp|V212_FOWPN|PROBABLE serine/threonine-protein kinase FPV212|Fowlpox virus (strain

Query: 1 PSPAGNLLEE 10
P P G LLE+
Sbjct: 10 PLPEGTLLED 19


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 PSPAGN 6
PSP+GN
Sbjct: 613 PSPSGN 618


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 PSPAGN 6
PSP+GN
Sbjct: 612 PSPSGN 617


>sp|ERBB_AVIER|TYROSINE-PROTEIN kinase transforming protein erbB|Avian erythroblastosis virus

Query: 3 PAGNLLEE 10
P GN LEE
Sbjct: 492 PTGNFLEE 499


>sp|POL2_SQMVM|RNA2 polyprotein|Squash mosaic virus (strain melon)

Query: 1 PSPAGNLLE 9
PSP NLL+
Sbjct: 879 PSPIANLLK 887


>sp|ERBB_ALV|TYROSINE-PROTEIN kinase transforming protein erbB|Avian leukosis virus (ALV)

Query: 3 PAGNLLEE 10
P GN LEE
Sbjct: 492 PTGNFLEE 499




82|SequenceR|415|406|LDVAPPSPAG

>sp|PORTL_BPAPS|PORTAL protein|Acyrthosiphon pisum secondary endosymbiont phage

Query: 3 VAPPSPAG 10
+APP+P G
Sbjct: 394 IAPPTPVG 401


>sp|VE7_HPV6B|PROTEIN E7|Human papillomavirus type 6b

Query: 1 LDVAPPSPAG 10
LD+ PP P G
Sbjct: 13 LDLQPPDPVG 22


>sp|VE7_HPV6A|PROTEIN E7|Human papillomavirus type 6a

Query: 1 LDVAPPSPAG 10
LD+ PP P G
Sbjct: 13 LDLQPPDPVG 22


>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 VAPPSPA 9
+APPSPA
Sbjct: 580 MAPPSPA 586


>sp|CPM_GLRV3|MINOR capsid protein|Grapevine leafroll-associated virus 3 (isolate

Query: 2 DVAPPSPAG 10
D APP P G
Sbjct: 28 DEAPPDPPG 36


>sp|VE7_HPV11|PROTEIN E7|Human papillomavirus 11

Query: 1 LDVAPPSPAG 10
LD+ PP P G
Sbjct: 13 LDLQPPDPVG 22


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 1 LDVAPPS 7
LDV PPS
Sbjct: 1533 LDVEPPS 1539


>sp|DARB_BPP1|DEFENSE against restriction protein B|Escherichia phage P1 (Bacteriophage

Query: 1 LDVAPPSPAG 10
LD+A PSP
Sbjct: 357 LDMAEPSPTA 366




83|SequenceR|420|411|ESVPSLDVAP

>sp|MVP_RGDV|MOVEMENT protein|Rice gall dwarf virus (RGDV)

Query: 3 VPSLDVAP 10
+P+LDV P
Sbjct: 102 IPTLDVTP 109


>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20

Query: 1 ESVPSLDVAP 10
E VP+LD P
Sbjct: 131 EEVPALDSQP 140


>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain

Query: 1 ESVPSLD 7
ESVP+LD
Sbjct: 38 ESVPNLD 44


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 1 ESVPSLDVAP 10
E P LDV+P
Sbjct: 8 EIFPKLDVSP 17


>sp|VINT_FRG3G|INTEGRASE homolog|Frog virus 3 (isolate Goorha)

Query: 2 SVPSLDVAP 10
S P+LDV P
Sbjct: 67 SCPTLDVGP 75


>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)

Query: 1 ESVPSLDVAP 10
ES+P+L AP
Sbjct: 305 ESMPTLTAAP 314


>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)

Query: 1 ESVPSLDVAP 10
ES+P+L AP
Sbjct: 305 ESMPTLTAAP 314


>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)

Query: 1 ESVPSLDVAP 10
ES+P+L AP
Sbjct: 305 ESMPTLTAAP 314


>sp|G3P_BPPF3|ATTACHMENT protein G3P|Pseudomonas phage Pf3 (Bacteriophage Pf3)

Query: 3 VPSLDVAP 10
+PSLD++P
Sbjct: 292 IPSLDLSP 299




84|SequenceR|425|416|AQEEPESVPS

***** No hits found ******


85|SequenceR|430|421|ATVEKAQEEP

>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37

Query: 1 ATVEKAQEEP 10
A VEK +E+P
Sbjct: 442 AVVEKEKEDP 451


>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17

Query: 1 ATVEKAQEEP 10
A VEK +E+P
Sbjct: 442 AVVEKEKEDP 451




86|SequenceR|435|426|PPAMSATVEK

***** No hits found ******


87|SequenceR|440|431|ASPITPPAMS

>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka

Query: 3 PITPPAMS 10
P TPPAM+
Sbjct: 144 PTTPPAMT 151


>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)

Query: 3 PITPPAMS 10
P TPPAM+
Sbjct: 144 PTTPPAMT 151


>sp|CD2H_ASFK5|CD2 homolog|African swine fever virus (isolate

Query: 3 PITPPAMS 10
P+TPP +S
Sbjct: 127 PVTPPIIS 134


>sp|VG43_ICHVA|UNCHARACTERIZED protein ORF43|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 ASPITPPA 8
A+P TPPA
Sbjct: 515 ATPGTPPA 522


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2 SPITPPA 8
SP TPPA
Sbjct: 659 SPSTPPA 665


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2 SPITPPA 8
SP TPPA
Sbjct: 659 SPSTPPA 665


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 3 PITPPAMS 10
P TPPA++
Sbjct: 466 PCTPPALN 473


>sp|DPO13_BPK64|DEPOLYMERASE, capsule K21-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 1 ASPITP 6
ASPITP
Sbjct: 634 ASPITP 639




88|SequenceR|445|436|ATAPTASPIT

>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 3 APTASPIT 10
APTASP+T
Sbjct: 448 APTASPMT 455


>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 3 APTASPIT 10
APTASP+T
Sbjct: 448 APTASPMT 455


>sp|DPO13_BPK64|DEPOLYMERASE, capsule K21-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 4 PTASPIT 10
PTASPIT
Sbjct: 632 PTASPIT 638




89|SequenceR|450|441|STASPATAPT

>sp|VP7_ROTE2|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Equine/United

Query: 2 TASPATAP 9
TA P TAP
Sbjct: 272 TADPTTAP 279


>sp|VP7_ROT18|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 2 TASPATAP 9
TA P TAP
Sbjct: 272 TADPTTAP 279


>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 2 TASPATAP 9
TA P TAP
Sbjct: 272 TADPTTAP 279


>sp|VP7_ROTD9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Dog/United

Query: 2 TASPATAP 9
TA P TAP
Sbjct: 272 TADPTTAP 279


>sp|VP7_ROTP2|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 2 TASPATAP 9
TA P TAP
Sbjct: 272 TADPTTAP 279




90|SequenceR|455|446|EEQAPSTASP

***** No hits found ******


91|SequenceR|460|451|EEEMEEEQAP

>sp|PORTL_BPHC1|PROBABLE portal protein|Haemophilus phage HP1 (strain HP1c1)

Query: 2 EEMEEEQA 9
EEMEEE A
Sbjct: 218 EEMEEEIA 225


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 EEEMEEEQ 8
EE++E+EQ
Sbjct: 3044 EEDLEDEQ 3051




92|SequenceR|465|456|EEEEEEEEME

***** No hits found ******


93|SequenceR|470|461|EGAEGEEEEE

>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 GAEGEEEEE 10
G EG E EE
Sbjct: 979 GVEGHEAEE 987


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 GAEGEEEEE 10
G EG E EE
Sbjct: 979 GVEGHEAEE 987


>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 GAEGEEEEE 10
GA+G E+EE
Sbjct: 692 GADGAEDEE 700




94|SequenceR|475|466|EAEGAEGAEG

>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 3 EGAEGAEG 10
E +EGAEG
Sbjct: 1015 EASEGAEG 1022


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 3 EGAEGAEG 10
E +EGAEG
Sbjct: 1015 EASEGAEG 1022


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 EGAEGAEG 10
E AEGAEG
Sbjct: 476 EKAEGAEG 483




95|SequenceR|480|471|GGKESEAEGA

***** No hits found ******


96|SequenceR|485|476|PLLEEGGKES

>sp|LEF1_NPVOP|LATE expression factor 1|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 3 LEEGGKE 9
LEEGG+E
Sbjct: 65 LEEGGRE 71


>sp|VP5_FDVS|UNCHARACTERIZED protein VP5|Fiji disease virus (isolate Sugarcane)

Query: 1 PLLEEGGKES 10
PLL++GG+ S
Sbjct: 643 PLLKKGGRGS 652


>sp|VF145_ASFWA|UNCHARACTERIZED protein K145R|African swine fever virus (isolate

Query: 2 LLEEGGKES 10
++EEGG+ES
Sbjct: 137 IVEEGGEES 145


>sp|VF145_ASFB7|UNCHARACTERIZED protein K145R|African swine fever virus (strain

Query: 2 LLEEGGKES 10
++EEGG+ES
Sbjct: 137 IVEEGGEES 145


>sp|VF145_ASFK5|UNCHARACTERIZED protein K145R|African swine fever virus (isolate

Query: 2 LLEEGGKES 10
++EEGG+ES
Sbjct: 137 IVEEGGEES 145


>sp|CAPSD_BPKO2|MAJOR capsid protein|Klebsiella oxytoca phage phiKO2 (Bacteriophage

Query: 3 LEEGGKES 10
L EGGKES
Sbjct: 351 LGEGGKES 358


>sp|VF145_ASFP4|UNCHARACTERIZED protein K145R|African swine fever virus (isolate

Query: 2 LLEEGGKES 10
++EEGG+ES
Sbjct: 137 IVEEGGEES 145


>sp|VF145_ASFM2|UNCHARACTERIZED protein K145R|African swine fever virus (isolate

Query: 2 LLEEGGKES 10
++EEGG+ES
Sbjct: 137 IVEEGGEES 145




97|SequenceR|490|481|PTSEPPLLEE

>sp|36014_ASFWA|PROTEIN MGF 360-14L|African swine fever virus (isolate

Query: 1 PTSEPPLLE 9
P SEP LLE
Sbjct: 112 PVSEPRLLE 120


>sp|Y051_NPVOP|UNCHARACTERIZED 36.2 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 5 PPLLEE 10
PPLLEE
Sbjct: 204 PPLLEE 209


>sp|NSP4_ROTB2|NON-STRUCTURAL glycoprotein 4|Rotavirus X (isolate

Query: 2 TSEPPLLEE 10
TSE P+L+E
Sbjct: 4 TSESPILDE 12


>sp|3608L_ASFP4|PROTEIN MGF 360-8L|African swine fever virus (isolate

Query: 1 PTSEPPLLE 9
P +EP LLE
Sbjct: 112 PVTEPRLLE 120


>sp|36014_ASFP4|PROTEIN MGF 360-14L|African swine fever virus (isolate

Query: 1 PTSEPPLLE 9
P +EP LLE
Sbjct: 112 PVTEPRLLE 120


>sp|NSP4_ROTJ1|NON-STRUCTURAL glycoprotein 4|Rotavirus X (strain

Query: 2 TSEPPLLEE 10
TSE P+L+E
Sbjct: 4 TSESPVLDE 12


>sp|REPA_MSVRA|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype D

Query: 1 PTSEPPLL 8
PTSEP LL
Sbjct: 192 PTSEPDLL 199


>sp|REPA_MSVSE|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype C

Query: 1 PTSEPPLL 8
PTSEP LL
Sbjct: 192 PTSEPDLL 199


>sp|REP_MSVSE|REPLICATION-ASSOCIATED protein|Maize streak virus genotype C

Query: 1 PTSEPPLL 8
PTSEP LL
Sbjct: 192 PTSEPDLL 199


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 PTSEPPLLE 9
P +PPLLE
Sbjct: 2292 PGYDPPLLE 2300


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 PTSEPPLLE 9
P +PPLLE
Sbjct: 2292 PGYDPPLLE 2300




98|SequenceR|495|486|LNAPIPTSEP

>sp|5057R_ASFWA|PROTEIN MGF 505-7R|African swine fever virus (isolate

Query: 2 NAPIPTSEP 10
N PIP EP
Sbjct: 186 NLPIPDPEP 194


>sp|5057R_ASFP4|PROTEIN MGF 505-7R|African swine fever virus (isolate

Query: 2 NAPIPTSEP 10
N PIP EP
Sbjct: 186 NLPIPDPEP 194


>sp|PB2_ISAV8|POLYMERASE basic protein 2|Infectious salmon anemia virus (isolate

Query: 1 LNAPIPTSEP 10
+ AP P++EP
Sbjct: 120 VGAPCPSTEP 129


>sp|P4_PCVC|UNCHARACTERIZED protein p4|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 2 NAPIPTSEP 10
NA +PT EP
Sbjct: 657 NAIVPTREP 665


>sp|Y150A_ABVP|UNCHARACTERIZED protein ORF150a|Acidianus bottle-shaped virus (isolate

Query: 2 NAPIPTSE 9
N PIPT E
Sbjct: 142 NTPIPTRE 149


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 LNAPIPTSEP 10
+++P+P EP
Sbjct: 1535 IDSPVPIKEP 1544


>sp|CAPSD_PSVJ|CAPSID protein|Peanut stunt virus (strain J)

Query: 1 LNAPIPTSE 9
LN P+P SE
Sbjct: 89 LNLPVPVSE 97


>sp|TERL_BPT3|TERMINASE, large subunit|Enterobacteria phage T3 (Bacteriophage T3)

Query: 1 LNAPIPT 7
LN P+PT
Sbjct: 30 LNLPVPT 36


>sp|TERL_BPT7|TERMINASE, large subunit|Escherichia phage T7 (Bacteriophage T7)

Query: 1 LNAPIPT 7
LN P+PT
Sbjct: 30 LNLPVPT 36




99|SequenceR|500|491|ELNQSLNAPI

>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 1 ELNQSLNAPI 10
ELN LNAP+
Sbjct: 1309 ELNGYLNAPL 1318


>sp|YL265_MIMIV|UNCHARACTERIZED protein L265|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LNQSLNAPI 10
+NQS+N P+
Sbjct: 90 MNQSMNQPM 98


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 2 LNQSLNAPI 10
LNQ+ N PI
Sbjct: 2556 LNQAFNKPI 2564


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 3 NQSLNAPI 10
N S+NAPI
Sbjct: 733 NSSVNAPI 740


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 3 NQSLNAPI 10
N S+NAPI
Sbjct: 733 NSSVNAPI 740




100|SequenceR|505|496|TAAAAELNQS

***** No hits found ******


101|SequenceR|510|501|SVAVQTAAAA

***** No hits found ******


102|SequenceR|515|506|RRKPVSVAVQ

***** No hits found ******


103|SequenceR|520|511|EKIKRRRKPV

>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42

Query: 4 KRRRKPV 10
+RRRKPV
Sbjct: 460 RRRRKPV 466


>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)

Query: 1 EKIKRRRKPV 10
EKI+RRR V
Sbjct: 393 EKIRRRRDVV 402


>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 EKIKRRR 7
EKI+RRR
Sbjct: 393 EKIRRRR 399


>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 EKIKRRRKP 9
EK+ +RRKP
Sbjct: 31 EKLHKRRKP 39


>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 EKIKRRRKP 9
EK+ +RRKP
Sbjct: 31 EKLYKRRKP 39


>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 EKIKRRRKP 9
EK+ +RRKP
Sbjct: 31 EKLYKRRKP 39


>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 EKIKRRRKP 9
EK+ +RRKP
Sbjct: 31 EKLYKRRKP 39


>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 EKIKRRRKP 9
EK+ +RRKP
Sbjct: 31 EKLYKRRKP 39


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 EKIKRRRKP 9
EK+KR KP
Sbjct: 1993 EKLKRHVKP 2001


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 EKIKRRRKP 9
EK+KR KP
Sbjct: 1991 EKLKRHVKP 1999


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 EKIKRRRKP 9
EK+KR KP
Sbjct: 1991 EKLKRHVKP 1999


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 EKIKRRRKP 9
EK+KR KP
Sbjct: 1993 EKLKRHVKP 2001


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 EKIKRRRKP 9
EK+KR KP
Sbjct: 1991 EKLKRHVKP 1999


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 EKIKRRRKP 9
EK+KR KP
Sbjct: 1991 EKLKRHVKP 1999




104|SequenceR|525|516|EKKNLEKIKR

>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 KNLEKIKR 10
K LEK+KR
Sbjct: 2450 KELEKLKR 2457


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 KNLEKIKR 10
K LEK+KR
Sbjct: 2480 KELEKLKR 2487


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 KNLEKIKR 10
K LEK+KR
Sbjct: 2480 KELEKLKR 2487


>sp|MVP_CERV|MOVEMENT protein|Carnation etched ring virus (CERV)

Query: 2 KKNLEKIK 9
KKNL+KIK
Sbjct: 101 KKNLDKIK 108




105|SequenceR|530|521|LDGVAEKKNL

>sp|VP27_HIS1I|STRUCTURAL protein 27|His1 virus (isolate Australia/Victoria) (His1V)

Query: 2 DGVAEKKNL 10
DG AE KN+
Sbjct: 415 DGYAENKNM 423




106|SequenceR|535|526|KFADLLDGVA

>sp|NCAP_CVPRM|NUCLEOPROTEIN respiratory coronavirus (strain RM4)

Query: 1 KFADLLDGV 9
KF D LDGV
Sbjct: 104 KFKDKLDGV 112


>sp|NCAP_CVPR8|NUCLEOPROTEIN respiratory coronavirus (strain 86/137004

Query: 1 KFADLLDGV 9
KF D LDGV
Sbjct: 104 KFKDKLDGV 112


>sp|NCAP_CVPPU|NUCLEOPROTEIN transmissible gastroenteritis coronavirus (strain

Query: 1 KFADLLDGV 9
KF D LDGV
Sbjct: 104 KFKDKLDGV 112


>sp|NCAP_CVPFS|NUCLEOPROTEIN transmissible gastroenteritis coronavirus (strain

Query: 1 KFADLLDGV 9
KF D LDGV
Sbjct: 104 KFKDKLDGV 112


>sp|5053R_ASFK5|PROTEIN MGF 505-3R|African swine fever virus (isolate

Query: 1 KFADLLDG 8
K+AD LDG
Sbjct: 151 KYADYLDG 158


>sp|NCAP_CVCAK|NUCLEOPROTEIN coronavirus (strain K378) (CCoV)

Query: 1 KFADLLDGV 9
KF D +DGV
Sbjct: 104 KFKDRIDGV 112


>sp|NCAP_FIPV|NUCLEOPROTEIN coronavirus (strain FIPV WSU-79/1146)

Query: 1 KFADLLDGV 9
KF D +DGV
Sbjct: 104 KFKDKIDGV 112


>sp|NCTSP_BPN4|NON-CONTRACTILE tail sheath|Enterobacteria phage N4 (Bacteriophage N4)

Query: 2 FADLLDGVA 10
FADL GVA
Sbjct: 209 FADLRTGVA 217


>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain

Query: 2 FADLLDG 8
F DLLDG
Sbjct: 596 FEDLLDG 602


>sp|GLYCO_SYNV|SPIKE glycoprotein|Sonchus yellow net virus (SYNV)

Query: 2 FADLLDGVA 10
FA+++DGV
Sbjct: 532 FAEIVDGVG 540


>sp|CAPSD_BBV|CAPSID protein alpha|Black beetle virus (BBV)

Query: 1 KFADLLDGV 9
+F+D+L+G+
Sbjct: 251 EFSDILEGI 259




107|SequenceR|540|531|APNAEKFADL

>sp|VF030_IIV3|UNCHARACTERIZED protein 106R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 PNAEKFADL 10
PN EKF DL
Sbjct: 11 PNEEKFKDL 19


>sp|VP4_ROTBU|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 3 NAEKFADL 10
N EKFADL
Sbjct: 704 NMEKFADL 711


>sp|VP4_ROTW3|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 3 NAEKFADL 10
N EKFADL
Sbjct: 704 NIEKFADL 711


>sp|VP4_ROTBV|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/United

Query: 3 NAEKFADL 10
N EKFADL
Sbjct: 704 NIEKFADL 711


>sp|VP4_ROTB9|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 NAEKFADL 10
+ EKFADL
Sbjct: 698 DVEKFADL 705




108|SequenceR|545|536|EVEPVAPNAE

>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 VEPVAPNAE 10
V PVAPN E
Sbjct: 435 VTPVAPNPE 443


>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)

Query: 2 VEPVAPNAE 10
V PVAPN E
Sbjct: 435 VTPVAPNPE 443


>sp|GH_BHV1C|ENVELOPE glycoprotein H|Bovine herpesvirus 1.1 (strain Cooper)

Query: 2 VEPVAPNAE 10
+ PVAPNA
Sbjct: 660 IVPVAPNAS 668




109|SequenceR|550|541|APPQNEVEPV

>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 1 APPQNEVEPV 10
APP E EP+
Sbjct: 1490 APPVEEAEPL 1499


>sp|VG12_BPP22|REPLICATIVE DNA helicase|Salmonella phage P22 (Bacteriophage P22)

Query: 3 PQNEVEPV 10
P+NEV+PV
Sbjct: 138 PRNEVKPV 145


>sp|GH_MEHV1|ENVELOPE glycoprotein H|Meleagrid herpesvirus 1 (MeHV-1) (Turkey

Query: 2 PPQNEVEPV 10
PP+ + EPV
Sbjct: 246 PPRQQYEPV 254


>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong

Query: 1 APPQNEVEP 9
+PP N+V P
Sbjct: 44 SPPNNQVMP 52


>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979

Query: 1 APPQNEVEP 9
+PP N+V P
Sbjct: 44 SPPNNQVMP 52


>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980

Query: 1 APPQNEVEP 9
+PP N+V P
Sbjct: 44 SPPNNQVMP 52


>sp|VE7_HPV45|PROTEIN E7|Human papillomavirus 45

Query: 3 PQNEVEPV 10
PQNE++PV
Sbjct: 17 PQNELDPV 24


>sp|VF355_IIV3|PUTATIVE CTD phosphatase-like protein 355R|Invertebrate iridescent virus 3

Query: 3 PQNEVEP 9
PQN+V+P
Sbjct: 91 PQNKVKP 97


>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993

Query: 1 APPQNEVEP 9
+PP N+V P
Sbjct: 44 SPPNNQVIP 52


>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005

Query: 4 QNEVEPV 10
QN+VEP+
Sbjct: 35 QNQVEPI 41


>sp|Y077_OSHVF|UNCHARACTERIZED protein ORF77|Ostreid herpesvirus 1 (isolate France)

Query: 3 PQNEVEP 9
P+NE++P
Sbjct: 860 PENEIKP 866


>sp|VE7_HPVME|PROTEIN E7|Human papillomavirus type ME180

Query: 3 PQNEVEPV 10
P NE+EPV
Sbjct: 17 PCNEIEPV 24




110|SequenceR|555|546|GPNSGAPPQN

>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1 GPNSGAPPQN 10
GP SG PP N
Sbjct: 1515 GPYSGNPPHN 1524


>sp|TERM_ADEG1|PRETERMINAL protein|Fowl adenovirus A serotype 1

Query: 2 PNSGAPPQN 10
PN APP N
Sbjct: 11 PNVAAPPYN 19


>sp|YO12_BPHC1|UNCHARACTERIZED 18.2 kDa protein in|Haemophilus phage HP1 (strain HP1c1)

Query: 1 GPNSGAPPQ 9
GPN PPQ
Sbjct: 123 GPNLEMPPQ 131


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 2 PNSGAPPQN 10
PN APP+N
Sbjct: 6637 PNYNAPPKN 6645


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 3 NSGAPPQ 9
N+G+PPQ
Sbjct: 3689 NNGSPPQ 3695


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 3 NSGAPPQ 9
N+G+PPQ
Sbjct: 3689 NNGSPPQ 3695


>sp|VP8_RRSVT|STRUCTURAL protein precursor VP8|Rice ragged stunt virus (isolate

Query: 1 GPNSGAPP 8
G NSG PP
Sbjct: 469 GSNSGLPP 476


>sp|GL_GPCMV|ENVELOPE glycoprotein L|Guinea pig cytomegalovirus (strain 22122)

Query: 1 GPNSGAPPQN 10
G + GAPP N
Sbjct: 171 GFDLGAPPHN 180


>sp|H962R_ASFK5|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 2 PNSGAPPQ 9
PN APP+
Sbjct: 947 PNPSAPPE 954


>sp|H962R_ASFM2|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 2 PNSGAPPQ 9
PN APP+
Sbjct: 947 PNPSAPPE 954


>sp|H962R_ASFP4|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 2 PNSGAPPQ 9
PN APP+
Sbjct: 947 PNPSAPPE 954


>sp|H962R_ASFWA|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 2 PNSGAPPQ 9
PN APP+
Sbjct: 947 PNPSAPPE 954


>sp|TNPA_BPMU|DDE-RECOMBINASE A|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 GPNSGAPPQN 10
GPN A P N
Sbjct: 416 GPNPQAKPDN 425


>sp|RDRP_PRV|RNA-DIRECTED RNA polymerase|Pieris rapae virus

Query: 2 PNSGAPPQN 10
P++G PP N
Sbjct: 933 PSTGPPPSN 941


>sp|H962R_ASFB7|PUTATIVE primase C962R|African swine fever virus (strain

Query: 2 PNSGAPPQ 9
PN APP+
Sbjct: 947 PNLSAPPE 954


>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain

Query: 4 SGAPPQ 9
SGAPPQ
Sbjct: 372 SGAPPQ 377


>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate

Query: 4 SGAPPQ 9
SGAPPQ
Sbjct: 372 SGAPPQ 377




111|SequenceR|560|551|GESEPGPNSG

>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain

Query: 2 ESEPGPN 8
ES PGPN
Sbjct: 322 ESNPGPN 328


>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate

Query: 2 ESEPGPN 8
ES PGPN
Sbjct: 322 ESNPGPN 328


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 GESEPGPNSG 10
G S+PGP+ G
Sbjct: 146 GFSDPGPDVG 155


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 GESEPGPNSG 10
G S+PGP+ G
Sbjct: 146 GFSDPGPDVG 155


>sp|RDRP_PVXX3|RNA replication protein|Potato virus X (strain X3)

Query: 1 GESEPGPNSG 10
GE+EP SG
Sbjct: 541 GEAEPNETSG 550


>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)

Query: 1 GESEPGPNSG 10
G +P PN G
Sbjct: 2816 GSIQPNPNKG 2825


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 1 GESEPGP 7
GES+P P
Sbjct: 2589 GESDPSP 2595


>sp|VG28_BPML5|MINOR tail protein Gp28|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 GESEPGPNSG 10
G+S PG N G
Sbjct: 378 GQSAPGINEG 387


>sp|VG28_BPMD2|MINOR tail protein Gp28|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 GESEPGPNSG 10
G+S PG N G
Sbjct: 378 GQSAPGINEG 387


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 GESEPGPNS 9
G+SEP P S
Sbjct: 1815 GKSEPFPES 1823


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 GESEPGPNS 9
G+SEP P S
Sbjct: 1815 GKSEPFPES 1823


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1 GESEPGPNS 9
G+SEP P S
Sbjct: 1815 GKSEPFPES 1823


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1 GESEPGPNS 9
G+SEP P S
Sbjct: 1815 GKSEPFPES 1823


>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)

Query: 1 GESEPGPN 8
G+ EP PN
Sbjct: 516 GKEEPNPN 523


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1 GESEPGPNS 9
G+SEP P S
Sbjct: 1815 GKSEPFPES 1823


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1 GESEPGPNS 9
G+SEP P S
Sbjct: 1815 GKSEPFPES 1823


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 GESEPGPNS 9
G+SEP P S
Sbjct: 1815 GKSEPFPES 1823


>sp|MVP_MYMVV|MOVEMENT protein BC1|Mungbean yellow mosaic virus (strain

Query: 5 PGPNSG 10
PGPN G
Sbjct: 187 PGPNQG 192




112|SequenceR|565|556|PPVGSGESEP

>sp|CAPSD_CLBVS|CAPSID protein|Citrus leaf blotch virus (isolate

Query: 1 PPVGSGESEP 10
P GSG SEP
Sbjct: 130 PLTGSGSSEP 139


>sp|SIGM1_REOVD|OUTER capsid protein sigma-1|Reovirus type 3 (strain Dearing)

Query: 1 PPVGSGESEP 10
PP+ +G++EP
Sbjct: 376 PPLLTGDTEP 385


>sp|UL144_HCMVO|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Toledo) (HHV-5)

Query: 1 PPVGSGE 7
PP GSG+
Sbjct: 36 PPCGSGQ 42


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 2 PVGSGESEP 10
P G GE++P
Sbjct: 2416 PFGEGEAKP 2424


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 2 PVGSGESEP 10
P G GE++P
Sbjct: 2416 PFGEGEAKP 2424


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 2 PVGSGESEP 10
P G GE++P
Sbjct: 2416 PFGDGEAKP 2424


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 2 PVGSGESEP 10
P G GE++P
Sbjct: 2416 PFGEGEAKP 2424


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2 PVGSGESEP 10
P G GE++P
Sbjct: 2416 PFGEGEAKP 2424




113|SequenceR|570|561|AEEPRPPVGS

>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United States/W

Query: 2 EEPRPPVGS 10
E PRPP+GS
Sbjct: 1702 ELPRPPLGS 1710


>sp|CAPSD_BPB03|MAJOR capsid protein|Bacillus phage B103 (Bacteriophage B103)

Query: 1 AEEPRPPVG 9
A+EP+P VG
Sbjct: 424 ADEPKPVVG 432


>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 EPRPPV 8
EPRPPV
Sbjct: 1275 EPRPPV 1280


>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 EPRPPV 8
EPRPPV
Sbjct: 1275 EPRPPV 1280


>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 EPRPPV 8
EPRPPV
Sbjct: 1275 EPRPPV 1280


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 EPRPPV 8
EPRPPV
Sbjct: 1275 EPRPPV 1280


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 3 EPRPPV 8
EPRPPV
Sbjct: 1275 EPRPPV 1280


>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 3 EPRPPV 8
EPRPPV
Sbjct: 1268 EPRPPV 1273


>sp|POLR_NORAV|REPLICATION polyprotein|Nora virus

Query: 3 EPRPP 7
EPRPP
Sbjct: 1187 EPRPP 1191


>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 2 EEPRPPV 8
+ PRPPV
Sbjct: 657 QHPRPPV 663


>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 2 EEPRPPV 8
+ PRPPV
Sbjct: 657 QHPRPPV 663


>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 2 EEPRPPV 8
+ PRPPV
Sbjct: 657 QHPRPPV 663


>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 2 EEPRPPV 8
+ PRPPV
Sbjct: 657 QHPRPPV 663


>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 2 EEPRPPV 8
+ PRPPV
Sbjct: 657 QHPRPPV 663


>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 AEEPRPPVG 9
A EPRPP G
Sbjct: 2534 AAEPRPPRG 2542


>sp|KITH_EHV2|THYMIDINE kinase|Equine herpesvirus 2 (strain 86/87)

Query: 1 AEEPRPPVG 9
EEPRP +G
Sbjct: 107 GEEPRPRLG 115


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 5 RPPVGS 10
RPPVGS
Sbjct: 196 RPPVGS 201


>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 AEEPRPP 7
AEEPR P
Sbjct: 2 AEEPRAP 8


>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)

Query: 1 AEEPRP 6
AEEPRP
Sbjct: 1750 AEEPRP 1755


>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)

Query: 1 AEEPRP 6
AEEPRP
Sbjct: 1751 AEEPRP 1756


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 5 RPPVGS 10
RPPVGS
Sbjct: 206 RPPVGS 211


>sp|POLS_BSNV|STRUCTURAL polyprotein|Blotched snakehead virus (BSNV) (Channa

Query: 3 EPRPPVGS 10
+PRPP+ S
Sbjct: 1049 QPRPPITS 1056


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 5 RPPVGS 10
RPPVGS
Sbjct: 206 RPPVGS 211




114|SequenceR|575|566|DWTEDAEEPR

>sp|X_WMHBV|PROTEIN X|Woolly monkey hepatitis B virus

Query: 2 WTEDAEEPR 10
W E EEPR
Sbjct: 118 WEEQGEEPR 126


>sp|VF717_ASFWA|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 2 WTEDAEEP 9
W D+EEP
Sbjct: 83 WNRDSEEP 90


>sp|VF717_ASFP4|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 2 WTEDAEEP 9
W D+EEP
Sbjct: 83 WNRDSEEP 90


>sp|VF717_ASFM2|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 2 WTEDAEEP 9
W D+EEP
Sbjct: 83 WNRDSEEP 90


>sp|VF717_ASFK5|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 2 WTEDAEEP 9
W D+EEP
Sbjct: 83 WNRDSEEP 90


>sp|VF717_ASFB7|UNCHARACTERIZED protein C717R|African swine fever virus (strain

Query: 2 WTEDAEEP 9
W D+EEP
Sbjct: 83 WNRDSEEP 90


>sp|NS1_PAVPN|INITIATOR protein NS1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 1 DWTEDAEEPR 10
DW+E EEP+
Sbjct: 558 DWSEKWEEPK 567


>sp|NS1_PAVPK|INITIATOR protein NS1|Porcine parvovirus (strain Kresse) (PPV)

Query: 1 DWTEDAEEPR 10
DW+E EEP+
Sbjct: 558 DWSEKWEEPK 567


>sp|PIF2_NPVAC|PER os infectivity factor 2|Autographa californica nuclear polyhedrosis

Query: 2 WTEDAEEPR 10
WT AE+PR
Sbjct: 153 WTCIAEDPR 161


>sp|NS1_PAVHH|INITIATOR protein NS1|Hamster parvovirus H1

Query: 1 DWTEDAEEPR 10
DW+ED EP+
Sbjct: 559 DWSEDWAEPK 568


>sp|NS1_PAVL3|INITIATOR protein NS1|Parvovirus LuIII

Query: 1 DWTEDAEEPR 10
DWTE+ EP+
Sbjct: 559 DWTENWAEPK 568


>sp|Y022_NPVOP|UNCHARACTERIZED 43.4 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 WTEDAEEPR 10
WT AE+PR
Sbjct: 153 WTCIAEDPR 161


>sp|P0_BWYVG|SUPPRESSOR of silencing P0|Beet western yellows virus (isolate

Query: 2 WTEDAE 7
WT DAE
Sbjct: 153 WTRDAE 158


>sp|Y022_GVXN|UNCHARACTERIZED ORF22 homolog|Xestia c-nigrum granulosis virus (XnGV)

Query: 2 WTEDAEEPR 10
WT AE+PR
Sbjct: 151 WTCIAEDPR 159


>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)

Query: 2 WTEDAEEP 9
WTE AE+P
Sbjct: 2222 WTEFAEKP 2229


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 2 WTEDAEEPR 10
WTE + PR
Sbjct: 739 WTEGSAPPR 747


>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)

Query: 2 WTEDAEEP 9
WTE AE+P
Sbjct: 2230 WTEFAEKP 2237


>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 2 WTEDAEEPR 10
WTE + PR
Sbjct: 739 WTEGSAPPR 747


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 2 WTEDAEEPR 10
WTE + PR
Sbjct: 739 WTEGSAPPR 747


>sp|POL_BLVAU|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Australian)

Query: 1 DWTEDAEEPR 10
+W + +E+PR
Sbjct: 945 NWIQSSEDPR 954


>sp|POL_BLVJ|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Japanese

Query: 1 DWTEDAEEPR 10
+W + +E+PR
Sbjct: 945 NWIQSSEDPR 954


>sp|PTASE_MBVLF|PUTATIVE serine protease|Mushroom bacilliform virus (isolate Australia/AUS

Query: 1 DWTEDA 6
DWT+DA
Sbjct: 486 DWTDDA 491




115|SequenceR|580|571|KDEKSDWTED

>sp|RUVV_FOWPN|HOLLIDAY junction resolvase|Fowlpox virus (strain NVSL) (FPV)

Query: 3 EKSDWTED 10
EKSDWT++
Sbjct: 33 EKSDWTKN 40


>sp|PHOSP_LBV|PHOSPHOPROTEIN bat virus (LBV)

Query: 1 KDEKSDWTED 10
K +KS+WT D
Sbjct: 182 KVQKSEWTRD 191


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 1 KDEKSDWTED 10
KD KSD+ D
Sbjct: 320 KDRKSDYAVD 329


>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)

Query: 1 KDEKSDWTED 10
KD KSD+ D
Sbjct: 320 KDRKSDYAVD 329


>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 1 KDEKSDWTED 10
KD KSD+ D
Sbjct: 320 KDRKSDYAVD 329




116|SequenceR|585|576|EANHIKDEKS

>sp|VE1_CRPVK|REPLICATION protein E1|Cottontail rabbit papillomavirus (strain Kansas)

Query: 3 NHIKDEKS 10
NH++DE S
Sbjct: 321 NHLQDESS 328


>sp|VLTF3_FOWPN|VIRAL late gene transcription factor|Fowlpox virus (strain NVSL) (FPV)

Query: 3 NHIKDEK 9
NHIK+EK
Sbjct: 114 NHIKEEK 120




117|SequenceR|590|581|GPQINEANHI

***** No hits found ******


118|SequenceR|595|586|EYKQEGPQIN

>sp|L_PARVP|RNA-DIRECTED RNA polymerase L|Parana mammarenavirus (isolate

Query: 2 YKQEGPQI 9
YK +GPQ+
Sbjct: 2055 YKIQGPQV 2062


>sp|L_BCNVU|RNA-DIRECTED RNA polymerase L|Bear Canyon mammarenavirus (isolate Mouse/United

Query: 2 YKQEGPQIN 10
YK +GP+ N
Sbjct: 2069 YKLQGPEYN 2077


>sp|YL309_MIMIV|UNCHARACTERIZED protein L309|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YKQEGPQI 9
YKQ+ P+I
Sbjct: 107 YKQQSPEI 114




119|SequenceR|600|591|QDSKYEYKQE

>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 1 QDSKYEYKQ 9
QDSKY+Y Q
Sbjct: 572 QDSKYQYLQ 580


>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60

Query: 2 DSKYEYKQE 10
D++Y+YKQE
Sbjct: 359 DNRYKYKQE 367


>sp|VF022_IIV6|PUTATIVE helicase 022L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 QDSKYEYKQE 10
+DS ++YK+E
Sbjct: 690 KDSSFDYKRE 699




120|SequenceR|605|596|NLPKWQDSKY

>sp|POL1_BBWV2|RNA1 polyprotein|Broad bean wilt virus 2

Query: 1 NLPKWQ 6
NLPKWQ
Sbjct: 837 NLPKWQ 842


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2 LPKWQDSKY 10
LP W+D Y
Sbjct: 2306 LPSWKDPTY 2314


>sp|VPB_BPP2|REPLICATION gene B protein|Escherichia phage P2 (Bacteriophage P2)

Query: 2 LPKWQDS 8
+P+WQD+
Sbjct: 26 VPRWQDT 32


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 1 NLPKWQDSKY 10
N +W D+K+
Sbjct: 2584 NFDQWHDAKF 2593


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 NLPKWQDSKY 10
N +W D+K+
Sbjct: 2584 NFDQWHDAKF 2593


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 1 NLPKWQ 6
+LPKWQ
Sbjct: 809 SLPKWQ 814


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 3 PKWQDSK 9
P+W DS+
Sbjct: 2077 PRWNDSR 2083


>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 1 NLPKWQDS 8
NLP W+++
Sbjct: 1892 NLPSWREA 1899


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 NLPKWQDS 8
+LPKW +S
Sbjct: 2998 SLPKWLES 3005


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 NLPKWQDS 8
+LPKW +S
Sbjct: 2998 SLPKWLES 3005


>sp|YR503_MIMIV|UNCHARACTERIZED protein R503|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NLPKWQDSKY 10
+L K+QDSK+
Sbjct: 18 SLIKFQDSKF 27


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 NLPKWQDS 8
+LPKW +S
Sbjct: 2998 SLPKWLES 3005


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 NLPKWQDS 8
+LPKW +S
Sbjct: 2998 SLPKWLES 3005


>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate

Query: 1 NLPKW 5
N+PKW
Sbjct: 401 NIPKW 405


>sp|Y070_NPVAC|UNCHARACTERIZED 34.4 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 2 LPKWQDSKY 10
LPK+ D K+
Sbjct: 35 LPKFSDEKF 43


>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)

Query: 1 NLPKWQDSKY 10
N P QD+KY
Sbjct: 45 NQPPRQDNKY 54


>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)

Query: 1 NLPKWQDSK 9
+LP W+D K
Sbjct: 244 SLPAWRDRK 252


>sp|Y167_ABVP|UNCHARACTERIZED protein ORF167|Acidianus bottle-shaped virus (isolate

Query: 1 NLPKWQ 6
N PKWQ
Sbjct: 30 NTPKWQ 35




121|SequenceR|610|601|KKEELNLPKW

>sp|YR351_MIMIV|UNCHARACTERIZED protein R351|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KKEELNLPKW 10
K+ ++NLP+W
Sbjct: 123 KETKMNLPRW 132


>sp|1A_CMVQ|REPLICATION protein 1a|Cucumber mosaic virus (strain Q)

Query: 1 KKEELNLPK 9
+ +ELNLPK
Sbjct: 912 RAKELNLPK 920


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 3 EELNLPK 9
EE+NLPK
Sbjct: 800 EEMNLPK 806


>sp|GAG_MMTVG|GAG polyprotein|Mouse mammary tumor virus (strain

Query: 1 KKEELNLPKW 10
KKE+LNL W
Sbjct: 48 KKEDLNLQDW 57


>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 3 EELNLPK 9
EE+NLPK
Sbjct: 801 EEMNLPK 807


>sp|1A_CMVY|REPLICATION protein 1a|Cucumber mosaic virus (strain Y)

Query: 1 KKEELNLPK 9
+ +E+NLPK
Sbjct: 915 RAKEMNLPK 923


>sp|1A_CMVO|REPLICATION protein 1a|Cucumber mosaic virus (strain O)

Query: 1 KKEELNLPK 9
+ +E+NLPK
Sbjct: 914 RAKEMNLPK 922


>sp|1A_CMVNT|REPLICATION protein 1a|Cucumber mosaic virus (strain NT9)

Query: 1 KKEELNLPK 9
+ +E+NLPK
Sbjct: 914 RAKEMNLPK 922


>sp|1A_CMVIX|REPLICATION protein 1a|Cucumber mosaic virus (strain Ixora)

Query: 1 KKEELNLPK 9
+ +E+NLPK
Sbjct: 914 RAKEMNLPK 922


>sp|1A_CMVII|REPLICATION protein 1a|Cucumber mosaic virus (strain Iizuka)

Query: 1 KKEELNLPK 9
+ +E+NLPK
Sbjct: 914 RAKEMNLPK 922


>sp|1A_CMVFN|REPLICATION protein 1a|Cucumber mosaic virus (strain FNY)

Query: 1 KKEELNLPK 9
+ +E+NLPK
Sbjct: 914 RAKEMNLPK 922


>sp|YL128_MIMIV|PUTATIVE GMC-type oxidoreductase L128|Acanthamoeba polyphaga mimivirus

Query: 3 EELNLPKW 10
EE+++P W
Sbjct: 147 EEISIPGW 154


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 3 EELNLPKW 10
E LN+P+W
Sbjct: 85 EFLNVPEW 92


>sp|HEMA_I87A1|HEMAGGLUTININ A virus (strain A/Mallard/Ohio/556/1987

Query: 3 EELNLPKW 10
E LN+P+W
Sbjct: 85 EFLNVPEW 92


>sp|PA_THOGV|POLYMERASE acidic protein|Thogoto virus (isolate SiAr 126)

Query: 3 EELNLPKW 10
EE++LP W
Sbjct: 329 EEMSLPPW 336


>sp|HEMA_I61A0|HEMAGGLUTININ A virus (strain A/Tern/South

Query: 3 EELNLPKW 10
E LN+P+W
Sbjct: 85 EFLNVPEW 92


>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12

Query: 3 EELNLP 8
EELNLP
Sbjct: 672 EELNLP 677


>sp|HEMA_I66A0|HEMAGGLUTININ A virus (strain A/Turkey/Ontario/7732/1966

Query: 3 EELNLPKW 10
E LN+P+W
Sbjct: 85 EFLNVPEW 92


>sp|YL788_MIMIV|PUTATIVE BTB/POZ domain-containing protein L788|Acanthamoeba polyphaga

Query: 1 KKEELNLPK 9
K +LNLPK
Sbjct: 204 KANDLNLPK 212




122|SequenceR|615|606|ERDYRKKEEL

>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 ERDYRK 6
ERDYRK
Sbjct: 71 ERDYRK 76


>sp|ITP_EHV1V|INNER tegument protein|Equine herpesvirus 1 (strain V592)

Query: 2 RDYRKKEEL 10
R+Y KKE+L
Sbjct: 1000 REYLKKEDL 1008


>sp|ITP_EHV1B|INNER tegument protein|Equine herpesvirus 1 (strain Ab4p)

Query: 2 RDYRKKEEL 10
R+Y KKE+L
Sbjct: 1000 REYLKKEDL 1008


>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 ERDYRK 6
ERDYRK
Sbjct: 71 ERDYRK 76


>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 ERDYRK 6
ERDYRK
Sbjct: 71 ERDYRK 76


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 2 RDYRKKEEL 10
R YRKK +L
Sbjct: 495 RPYRKKTDL 503


>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1

Query: 2 RDYRKKEEL 10
R YRKK +L
Sbjct: 498 RPYRKKTDL 506


>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 2 RDYRKKEEL 10
R YRKK +L
Sbjct: 497 RPYRKKTDL 505


>sp|VF424_ASFP4|PROBABLE methyltransferase EP424R|African swine fever virus (isolate

Query: 3 DYRKKEEL 10
DY K+EEL
Sbjct: 236 DYNKQEEL 243


>sp|VF424_ASFWA|PROBABLE methyltransferase EP424R|African swine fever virus (isolate

Query: 3 DYRKKEEL 10
DY K+EEL
Sbjct: 236 DYNKQEEL 243


>sp|VF424_ASFM2|PROBABLE methyltransferase EP424R|African swine fever virus (isolate

Query: 3 DYRKKEEL 10
DY K+EEL
Sbjct: 236 DYNKQEEL 243


>sp|VF424_ASFK5|PROBABLE methyltransferase EP424R|African swine fever virus (isolate

Query: 3 DYRKKEEL 10
DY K+EEL
Sbjct: 236 DYNKQEEL 243


>sp|VF424_ASFB7|PROBABLE methyltransferase EP424R|African swine fever virus (strain

Query: 3 DYRKKEEL 10
DY K+EEL
Sbjct: 237 DYNKQEEL 244


>sp|PRO_SRV1|GAG-PRO polyprotein|Simian retrovirus SRV-1

Query: 2 RDYRKKEEL 10
R YRKK +L
Sbjct: 498 RPYRKKTDL 506


>sp|PRO_MPMV|GAG-PRO polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 2 RDYRKKEEL 10
R YRKK +L
Sbjct: 497 RPYRKKTDL 505


>sp|PRO_SRV2|GAG-PRO polyprotein|Simian retrovirus SRV-2

Query: 2 RDYRKKEEL 10
R YRKK +L
Sbjct: 495 RPYRKKTDL 503




123|SequenceR|620|611|FGLLFERDYR

>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2

Query: 1 FGLLFERDYR 10
G LFERD++
Sbjct: 357 LGALFERDWQ 366


>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1

Query: 1 FGLLFERDYR 10
G LFERD++
Sbjct: 357 LGALFERDWQ 366


>sp|FIBER_BPP22|TAIL spike protein|Salmonella phage P22 (Bacteriophage P22)

Query: 2 GLLFERDY 9
GLL +RDY
Sbjct: 144 GLLIDRDY 151


>sp|AC23_NPVAC|PROTEIN AC23|Autographa californica nuclear polyhedrosis virus

Query: 2 GLLFERDY 9
GL+FER Y
Sbjct: 51 GLMFERMY 58


>sp|VP3_AHSV6|CORE protein VP3|African horse sickness virus 6

Query: 2 GLLFERDYR 10
GLL E+DY+
Sbjct: 76 GLLEEKDYK 84


>sp|VP3_AHSV|CORE protein VP3|African horse sickness virus (AHSV)

Query: 2 GLLFERDYR 10
GLL E+DY+
Sbjct: 76 GLLEEKDYK 84


>sp|RPC1_BPD3|REPRESSOR protein CI|Pseudomonas phage D3 (Bacteriophage D3)

Query: 2 GLLFERDY 9
GL+F+RD+
Sbjct: 109 GLVFKRDW 116


>sp|OBP_PSHV1|REPLICATION origin-binding protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 FGLLFERDYR 10
+GLL E YR
Sbjct: 842 YGLLRENQYR 851




124|SequenceR|625|616|AFIFQFGLLF

>sp|CPM_LIYV9|MINOR capsid protein|Lettuce infectious yellows virus (isolate

Query: 2 FIFQFGLLF 10
IFQFG+ F
Sbjct: 313 LIFQFGISF 321


>sp|YL539_MIMIV|UNCHARACTERIZED protein L539|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 AFIFQFGL 8
AF+F +GL
Sbjct: 242 AFVFHYGL 249


>sp|POL2_TORVR|RNA2 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 2 FIFQFGL 8
F+FQ+GL
Sbjct: 1728 FVFQWGL 1734


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 2 FIFQFGLLF 10
F+FQ G+L+
Sbjct: 1255 FMFQAGILY 1263


>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50

Query: 2 FIFQFGLL 9
F+FQ GLL
Sbjct: 485 FLFQTGLL 492




125|SequenceR|630|621|PKQMSAFIFQ

>sp|DUT_ALHV1|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Alcelaphine herpesvirus 1

Query: 1 PKQMSAFIFQ 10
P+ ++AF+FQ
Sbjct: 236 PRILAAFLFQ 245




126|SequenceR|635|626|HPLGEPKQMS

>sp|GB_EHV1A|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain AB1)

Query: 1 HPLGEP 6
HPLG+P
Sbjct: 57 HPLGKP 62


>sp|GB_EHV1|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain HVS25A)

Query: 1 HPLGEP 6
HPLG+P
Sbjct: 57 HPLGKP 62


>sp|US33_HCMVA|UNCHARACTERIZED protein HHLF3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 HPLGEPK 7
HPLGEP+
Sbjct: 108 HPLGEPE 114


>sp|GB_EHV1D|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain Kentucky

Query: 1 HPLGEP 6
HPLG+P
Sbjct: 57 HPLGKP 62


>sp|GB_EHV1B|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain Ab4p)

Query: 1 HPLGEP 6
HPLG+P
Sbjct: 57 HPLGKP 62


>sp|GB_EHV1V|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain V592)

Query: 1 HPLGEP 6
HPLG+P
Sbjct: 57 HPLGKP 62


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 2 PLGEPKQMS 10
PL PK MS
Sbjct: 541 PLSTPKSMS 549




127|SequenceR|640|631|VVDSIHPLGE

>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 5 IHPLGE 10
IHPLG+
Sbjct: 320 IHPLGD 325


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 5 IHPLGE 10
IHPLG+
Sbjct: 320 IHPLGD 325


>sp|Y007_SIFVH|PUTATIVE helicase 7|Sulfolobus islandicus filamentous virus (isolate

Query: 1 VVDSIHPLGE 10
++D IH +G+
Sbjct: 127 IIDEIHNIGD 136


>sp|VG01_ICHVA|UNCHARACTERIZED protein ORF1|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 VVDSIHP 7
V+D +HP
Sbjct: 40 VIDDVHP 46


>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 1 VVDSIHPLGE 10
V+D ++P GE
Sbjct: 1373 VIDILNPAGE 1382




128|SequenceR|645|636|NAKDLVVDSI

>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)

Query: 3 KDLVVDSI 10
KDL VDSI
Sbjct: 185 KDLFVDSI 192


>sp|Y356_SIRV1|UNCHARACTERIZED protein 356|Sulfolobus islandicus rod-shaped virus 1

Query: 1 NAKDLVVDS 9
N KDL++DS
Sbjct: 276 NLKDLLIDS 284


>sp|TM189_MIMIV|PROBABLE fatty acid desaturase MIMI_L630|Acanthamoeba polyphaga mimivirus

Query: 3 KDLVVDS 9
KDL++DS
Sbjct: 65 KDLIIDS 71


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 NAKDLVVDS 9
N KD+VV+S
Sbjct: 1592 NVKDVVVES 1600




129|SequenceR|650|641|RLPTKNAKDL

>sp|VP7_WTV|NON-STRUCTURAL protein PNS7|Wound tumor virus (WTV)

Query: 2 LPTKNAKDL 10
LPT AKDL
Sbjct: 108 LPTSQAKDL 116


>sp|F13_FOWPN|ENVELOPE protein F13 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 2 LPTKNAKD 9
LPTK KD
Sbjct: 235 LPTKRTKD 242


>sp|POLR_NORAV|REPLICATION polyprotein|Nora virus

Query: 1 RLPTKNAKDL 10
R TKN KDL
Sbjct: 1275 RAQTKNLKDL 1284




130|SequenceR|655|646|TPDLPRLPTK

>sp|DNBI_SCMVC|MAJOR DNA-binding protein|Simian cytomegalovirus (strain Colburn)

Query: 2 PDLPRLPTK 10
P +PRLP K
Sbjct: 494 PQMPRLPKK 502


>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0

Query: 1 TPDLPRLPTK 10
TPD P P K
Sbjct: 2302 TPDFPPFPQK 2311


>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)

Query: 1 TPDLPRLPTK 10
TPD P P K
Sbjct: 2302 TPDFPPFPQK 2311


>sp|VP75_ALHV1|PROBABLE membrane antigen 75|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 PDLPRLPT 9
PDL R+PT
Sbjct: 114 PDLKRIPT 121


>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)

Query: 4 LPRLPT 9
LPRLPT
Sbjct: 2863 LPRLPT 2868


>sp|VP03_ALHV1|PROBABLE tegument protein antigen 3|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 PDLPRLPT 9
PD+ RLPT
Sbjct: 97 PDINRLPT 104


>sp|CAPSD_PYMVV|CAPSID protein|Potato yellow mosaic virus (isolate

Query: 1 TPDLPR 6
TPD+PR
Sbjct: 56 TPDVPR 61


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 PDLPRLPTK 10
PD P LPT+
Sbjct: 524 PDNPTLPTE 532


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 2 PDLPRLPTK 10
PD PR+ TK
Sbjct: 2427 PDTPRMLTK 2435


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 2 PDLPRLPTK 10
PD P LPT+
Sbjct: 524 PDNPTLPTE 532


>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 1 TPDLPRL 7
TPD+P+L
Sbjct: 339 TPDIPQL 345


>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 1 TPDLPRL 7
TPD+P+L
Sbjct: 339 TPDIPQL 345


>sp|RDRP_P1AMV|RNA replication protein|Plantago asiatica mosaic potexvirus (P1AMV)

Query: 2 PDLPRLPTK 10
PDLP PTK
Sbjct: 511 PDLPPCPTK 519


>sp|POLN_TYMVA|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 TPDLPRLPT 9
+PDLP PT
Sbjct: 130 SPDLPVFPT 138


>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 1 TPDLPRL 7
TPD+P+L
Sbjct: 339 TPDIPQL 345


>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 1 TPDLPRL 7
TPD+P+L
Sbjct: 339 TPDIPQL 345


>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 TPDLPRLPT 9
+PDLP PT
Sbjct: 130 SPDLPVFPT 138


>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus

Query: 1 TPDLPRLPT 9
+PDLP PT
Sbjct: 130 SPDLPVFPT 138


>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 1 TPDLPRL 7
TPD+P+L
Sbjct: 339 TPDIPQL 345




131|SequenceR|660|651|IGQLRTPDLP

>sp|RPB2_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 1 IGQLRTPDL 9
IGQ+RTP++
Sbjct: 892 IGQMRTPEI 900


>sp|VP61_MRDV|PROBABLE non-structural 41.0 kDa protein|Maize rough dwarf virus (MRDV)

Query: 2 GQLRTPDLP 10
G++R PD+P
Sbjct: 65 GEMRIPDIP 73


>sp|CAPSD_PYMVV|CAPSID protein|Potato yellow mosaic virus (isolate

Query: 4 LRTPDLP 10
LRTPD+P
Sbjct: 54 LRTPDVP 60


>sp|S2_DPIRV|UNCHARACTERIZED protein S2|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 1 IGQLRTPDLP 10
IGQL P LP
Sbjct: 1062 IGQLIKPSLP 1071


>sp|CAPSD_PHUV|CAPSID protein|Pepper huasteco yellow vein virus

Query: 5 RTPDLP 10
RTPD+P
Sbjct: 55 RTPDVP 60


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 IGQLRTPDL 9
+G+L+TP+L
Sbjct: 1237 LGELKTPEL 1245


>sp|NCAP_PIRYV|NUCLEOPROTEIN virus (PIRYV)

Query: 1 IGQLRTPDL 9
IGQ+RT D+
Sbjct: 391 IGQVRTRDM 399


>sp|VP7_EHDV1|CORE protein VP7|Epizootic hemorrhagic disease virus 1

Query: 1 IGQLRTPDLP 10
IG L TP++P
Sbjct: 91 IGVLATPEIP 100


>sp|VP7_BTV17|CORE protein VP7|Bluetongue virus 17 (isolate USA)

Query: 1 IGQLRTPDLP 10
IG L TP++P
Sbjct: 91 IGVLATPEIP 100


>sp|VP7_BTV13|CORE protein VP7|Bluetongue virus 13 (isolate USA)

Query: 1 IGQLRTPDLP 10
IG L TP++P
Sbjct: 91 IGVLATPEIP 100


>sp|VP7_BTV2A|CORE protein VP7|Bluetongue virus 2 (isolate USA)

Query: 1 IGQLRTPDLP 10
IG L TP++P
Sbjct: 91 IGVLATPEIP 100


>sp|VP7_BTV1A|CORE protein VP7|Bluetongue virus 1 (isolate Australia)

Query: 1 IGQLRTPDLP 10
IG L TP++P
Sbjct: 91 IGVLATPEIP 100


>sp|VP7_BTV1S|CORE protein VP7|Bluetongue virus 1 (isolate South

Query: 1 IGQLRTPDLP 10
IG L TP++P
Sbjct: 91 IGVLATPEIP 100


>sp|VP7_BTV11|CORE protein VP7|Bluetongue virus 11 (isolate USA)

Query: 1 IGQLRTPDLP 10
IG L TP++P
Sbjct: 91 IGVLATPEIP 100


>sp|VP7_BTV10|CORE protein VP7|Bluetongue virus 10 (isolate USA)

Query: 1 IGQLRTPDLP 10
IG L TP++P
Sbjct: 91 IGVLATPEIP 100




132|SequenceR|665|656|DPGCNIGQLR

>sp|MCP_GAHVM|MAJOR capsid protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 PGCNIGQLR 10
PGCN+G +R
Sbjct: 441 PGCNVGDIR 449


>sp|P21_GLRV3|PROTEIN P21|Grapevine leafroll-associated virus 3 (isolate

Query: 1 DPGCNIGQLR 10
DPG N G L+
Sbjct: 13 DPGVNTGSLK 22


>sp|SPIKE_BRV1|SPIKE glycoprotein|Breda virus 1 (BRV-1)

Query: 2 PGCNIGQ 8
PGC+IG
Sbjct: 163 PGCSIGH 169


>sp|SPIKE_BEV|SPIKE glycoprotein|Berne virus (BEV)

Query: 2 PGCNIG 7
PGC+IG
Sbjct: 163 PGCSIG 168


>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate

Query: 1 DPGCNIG 7
D GCN+G
Sbjct: 2345 DRGCNVG 2351


>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)

Query: 2 PGCNIGQL 9
P C IGQ+
Sbjct: 33 PDCEIGQM 40


>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)

Query: 2 PGCNIGQL 9
P C IGQ+
Sbjct: 33 PDCEIGQM 40


>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQIR 323


>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQIR 323


>sp|NCAP_MOKV|NUCLEOPROTEIN virus (MOKV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQIR 323


>sp|NCAP_KHUV|NUCLEOPROTEIN virus (KHUV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQIR 323


>sp|NCAP_EBLV1|NUCLEOPROTEIN bat lyssavirus 1 (strain

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQIR 323


>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQIR 323


>sp|NCAP_ARAV|NUCLEOPROTEIN virus (ARAV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQIR 323


>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQIR 323


>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQIR 323


>sp|POL2_ARMVN|RNA2 polyprotein|Arabis mosaic virus (isolate NW)

Query: 2 PGCNIGQ 8
PGC IG+
Sbjct: 874 PGCYIGE 880


>sp|NCAP_WCBV|NUCLEOPROTEIN Caucasian bat virus (WCBV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|NCAP_IRKV|NUCLEOPROTEIN virus (IRKV)

Query: 3 GCNIGQLR 10
GC +GQ+R
Sbjct: 316 GCYMGQVR 323


>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45

Query: 1 DPGCNIGQLR 10
DP C+I +L+
Sbjct: 179 DPHCSITELK 188


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 PGCNIG 7
P CNIG
Sbjct: 567 PACNIG 572


>sp|TGB1_PMTVS|MOVEMENT protein TGB1|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 1 DPGCNIGQ 8
D GCN+ Q
Sbjct: 182 DKGCNLSQ 189


>sp|HEMA_I89A7|HEMAGGLUTININ A virus (strain A/Equine/Jillin/1/1989

Query: 1 DPGCNIGQ 8
DP CN+ Q
Sbjct: 94 DPHCNVFQ 101


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 PGCNIG 7
P CN+G
Sbjct: 567 PACNVG 572




133|SequenceR|670|661|FSPTFDPGCN

>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 FSPTFDP 7
FSP FDP
Sbjct: 49 FSPEFDP 55


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 FSPTFDPGC 9
F PTFD C
Sbjct: 2494 FVPTFDKSC 2502


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 3 PTFDPGC 9
P DPGC
Sbjct: 258 PIVDPGC 264


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 3 PTFDPGC 9
P DPGC
Sbjct: 258 PIVDPGC 264


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 3 PTFDPGC 9
P DPGC
Sbjct: 258 PIVDPGC 264


>sp|PORTL_BPN4|PROBABLE portal protein|Enterobacteria phage N4 (Bacteriophage N4)

Query: 1 FSPTFDPGCN 10
F PT DP N
Sbjct: 747 FDPTRDPALN 756


>sp|VG18_ICHVA|UNCHARACTERIZED protein ORF18|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 FSPTFDPGCN 10
FSP DP N
Sbjct: 89 FSPHLDPTVN 98


>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)

Query: 4 TFDPGC 9
++DPGC
Sbjct: 1864 SYDPGC 1869


>sp|FIB12_BPPH2|PRE-NECK appendage protein|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 2 SPTFDPGCN 10
SP FDP N
Sbjct: 777 SPDFDPNKN 785


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 1 FSPTFD 6
FSPTFD
Sbjct: 2106 FSPTFD 2111


>sp|YR433_MIMIV|UNCHARACTERIZED protein R433|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FSPTFDPGCN 10
FSP F GCN
Sbjct: 23 FSPEFFYGCN 32


>sp|YR314_MIMIV|UNCHARACTERIZED protein R314|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SPTFDPGCN 10
SPT++PG N
Sbjct: 107 SPTYNPGQN 115


>sp|YR474_MIMIV|UNCHARACTERIZED protein R474|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FSPTFDPGCN 10
+ TF+P CN
Sbjct: 142 YDATFNPDCN 151


>sp|CAP8_ADES1|PRE-HEXON-LINKING protein VIII|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 FSPTFDP 7
FSP FDP
Sbjct: 257 FSPLFDP 263


>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)

Query: 3 PTFDPGCN 10
P DP CN
Sbjct: 86 PCTDPACN 93


>sp|MVP_BBMV|MOVEMENT protein|Broad bean mottle virus

Query: 1 FSPTFD 6
FSPT+D
Sbjct: 153 FSPTYD 158


>sp|RDRP_BBMV|RNA-DIRECTED RNA polymerase 2a|Broad bean mottle virus

Query: 3 PTFDPG 8
P FDPG
Sbjct: 579 PEFDPG 584


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 3 PTFDP 7
PTFDP
Sbjct: 1697 PTFDP 1701


>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 FSPTFD 6
FSPT+D
Sbjct: 719 FSPTYD 724




134|SequenceR|675|666|RGLNAFSPTF

>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 4 NAFSPTF 10
NAFSP F
Sbjct: 638 NAFSPDF 644


>sp|Y034_OSHVF|UNCHARACTERIZED protein ORF34|Ostreid herpesvirus 1 (isolate France)

Query: 2 GLNAFSPTF 10
G+N+ +PTF
Sbjct: 10 GINSVAPTF 18




135|SequenceR|680|671|TSLTTRGLNA

>sp|YR458_MIMIV|PUTATIVE ATP-dependent RNA helicase R458|Acanthamoeba polyphaga mimivirus

Query: 1 TSLTTRGLN 9
T LT+RGL+
Sbjct: 442 TDLTSRGLD 450




136|SequenceR|685|676|RPPGRTSLTT

>sp|V_NDVU2|NON-STRUCTURAL protein V|Newcastle disease virus (strain Ulster/2C)

Query: 1 RPPGRTSLTT 10
+PPGR S T+
Sbjct: 138 KPPGRASSTS 147


>sp|RDRP_AQRVA|RNA-DIRECTED RNA polymerase VP2|Aquareovirus A (isolate Chum

Query: 2 PPGRTSLTT 10
PPGRT+ T
Sbjct: 188 PPGRTNCVT 196


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2 PPGRTSLT 9
PPG+ SLT
Sbjct: 1115 PPGKGSLT 1122




137|SequenceR|690|681|GGPGGRPPGR

>sp|VP91_NPVCF|CAPSID-ASSOCIATED protein Vp91|Choristoneura fumiferana nuclear polyhedrosis virus

Query: 5 GRPPGR 10
GRPPGR
Sbjct: 155 GRPPGR 160


>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)

Query: 1 GGPGGRPP 8
GGP RPP
Sbjct: 44 GGPASRPP 51


>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)

Query: 1 GGPGGRPP 8
GGP RPP
Sbjct: 44 GGPASRPP 51


>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 GPGGRP 7
GPGGRP
Sbjct: 285 GPGGRP 290


>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)

Query: 1 GGPGGRPP 8
GGPG PP
Sbjct: 952 GGPGIGPP 959


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 1 GGPGGRP 7
GGP G+P
Sbjct: 2634 GGPSGQP 2640


>sp|VF268_IIV3|UNCHARACTERIZED protein 074L|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 PGGRPPG 9
PGG+P G
Sbjct: 308 PGGKPGG 314


>sp|VG03_EHV1V|GENE 3 protein|Equine herpesvirus 1 (strain V592)

Query: 2 GPGGRPPGR 10
G GGRPP R
Sbjct: 203 GKGGRPPAR 211


>sp|VG03_EHV1B|GENE 3 protein|Equine herpesvirus 1 (strain Ab4p)

Query: 2 GPGGRPPGR 10
G GGRPP R
Sbjct: 203 GKGGRPPAR 211


>sp|VG03_EHV1K|GENE 3 protein|Equine herpesvirus 1 (strain Kentucky

Query: 2 GPGGRPPGR 10
G GGRPP R
Sbjct: 203 GKGGRPPAR 211


>sp|PORTL_BPT5|PORTAL protein|Escherichia phage T5 (Enterobacteria phage

Query: 1 GGPGGRPPG 9
G GGRP G
Sbjct: 390 GQEGGRPKG 398


>sp|POL_BLVJ|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Japanese

Query: 1 GGPGGRPPGR 10
GGP PPGR
Sbjct: 60 GGPTSCPPGR 69


>sp|CAPSD_PAVPN|CAPSID protein VP1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 3 PGGRPPGR 10
PG +PPG+
Sbjct: 117 PGSKPPGK 124


>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73

Query: 1 GGPGGRP 7
G PGG P
Sbjct: 89 GSPGGSP 95


>sp|NS1_I24A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Japan/1924

Query: 4 GGRPP 8
GGRPP
Sbjct: 206 GGRPP 210


>sp|CAPSD_PAVPK|CAPSID protein VP1|Porcine parvovirus (strain Kresse) (PPV)

Query: 3 PGGRPPGR 10
PG +PPG+
Sbjct: 117 PGSKPPGK 124


>sp|CAPSD_PAVP9|CAPSID protein VP1|Porcine parvovirus (strain 90HS) (PPV)

Query: 3 PGGRPPGR 10
PG +PPG+
Sbjct: 117 PGSKPPGK 124


>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New

Query: 4 GGRPP 8
GGRPP
Sbjct: 209 GGRPP 213


>sp|DPOL_ASFP4|DNA polymerase beta|African swine fever virus (isolate

Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1072 GNPAGNPAG 1080


>sp|DPOL_ASFM2|DNA polymerase beta|African swine fever virus (isolate

Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1072 GNPAGNPAG 1080


Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1076 GNPAGNPAG 1084


>sp|DPOL_ASFL6|DNA polymerase beta|African swine fever virus (isolate

Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1070 GNPAGNPAG 1078


Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1074 GNPAGNPAG 1082


Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1078 GNPAGNPAG 1086


Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1082 GNPAGNPAG 1090


Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1086 GNPAGNPAG 1094


Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1090 GNPAGNPAG 1098


Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1094 GNPAGNPAG 1102


Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1098 GNPAGNPAG 1106


Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1102 GNPAGNPAG 1110


Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1106 GNPAGNPAG 1114


Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1110 GNPAGNPAG 1118


>sp|DPOL_ASFB7|DNA polymerase beta|African swine fever virus (strain

Query: 1 GGPGGRPPG 9
G P G P G
Sbjct: 1081 GNPAGNPAG 1089


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 3 PGGRPPG 9
P G+PPG
Sbjct: 828 PNGKPPG 834


>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11

Query: 1 GGPGGRPP 8
GGP RPP
Sbjct: 83 GGPAARPP 90


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 3 PGGRPPG 9
P G+PPG
Sbjct: 828 PNGKPPG 834


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 3 PGGRPPG 9
P G+PPG
Sbjct: 828 PNGKPPG 834


>sp|POL_BLVAU|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Australian)

Query: 1 GGPGGRPPGR 10
GGP PPG+
Sbjct: 60 GGPASCPPGK 69


>sp|TSP_BPTWO|TAIL sheath protein|Staphylococcus phage Twort (strain DSM

Query: 1 GGPGGRPP 8
GG G PP
Sbjct: 310 GGTNGEPP 317


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 3 PGGRPPG 9
P G+PPG
Sbjct: 828 PNGKPPG 834


>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5

Query: 3 PGGRPPGR 10
PG RPP R
Sbjct: 534 PGPRPPTR 541


>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2

Query: 3 PGGRPPGR 10
PG RPP R
Sbjct: 534 PGPRPPTR 541


>sp|VG48_EHV2|TEGUMENT protein G48|Equine herpesvirus 2 (strain 86/87)

Query: 1 GGPGGRPPG 9
G GGR PG
Sbjct: 536 GAAGGRDPG 544


>sp|PRO_BLVJ|GAG-PRO polyprotein|Bovine leukemia virus (isolate Japanese

Query: 1 GGPGGRPPGR 10
GGP PPGR
Sbjct: 60 GGPTSCPPGR 69


>sp|CVC2_PSHV1|CAPSID vertex component 2|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 GPGGRPPG 9
PG RPP
Sbjct: 467 APGSRPPA 474


>sp|GIN_BPD10|SERINE recombinase gin|Escherichia phage D108 (Bacteriophage D108)

Query: 1 GGPGGRPP 8
G GGRPP
Sbjct: 134 GRIGGRPP 141


>sp|PORTL_BPN15|PORTAL protein|Escherichia phage N15 (Bacteriophage N15)

Query: 3 PGGRP 7
PGGRP
Sbjct: 224 PGGRP 228


>sp|GAG_BLVJ|GAG polyprotein|Bovine leukemia virus (isolate Japanese

Query: 1 GGPGGRPPGR 10
GGP PPGR
Sbjct: 60 GGPTSCPPGR 69


>sp|GIN_BPMU|SERINE recombinase gin|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 GGPGGRPP 8
G GGRPP
Sbjct: 134 GRIGGRPP 141


>sp|VF337_IIV6|PUTATIVE membrane protein 337L|Invertebrate iridescent virus 6 (IIV-6)

Query: 5 GRPPGR 10
G PPGR
Sbjct: 57 GNPPGR 62


>sp|Y054_NPVOP|UNCHARACTERIZED 42.5 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 4 GGRPPG 9
GG PPG
Sbjct: 282 GGAPPG 287


>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 GGPGGRPP 8
G PG PP
Sbjct: 418 GSPGDSPP 425


>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GGPGGRPP 8
G PG PP
Sbjct: 418 GSPGDSPP 425


>sp|VP03_EHV2|PROBABLE membrane antigen 3|Equine herpesvirus 2 (strain 86/87)

Query: 2 GPGGRPP 8
GPGG+PP
Sbjct: 30 GPGGQPP 36


>sp|P1_PEMVW|PROTEIN P1|Pea enation mosaic virus-1 (strain

Query: 4 GGRPPGR 10
GGR PGR
Sbjct: 700 GGRNPGR 706


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 2 GPGGRPPGR 10
G GG PP R
Sbjct: 9 GKGGGPPRR 17


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2 GPGGRPPGR 10
G GG PP R
Sbjct: 9 GKGGGPPRR 17


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 2 GPGGRPPGR 10
G GG PP R
Sbjct: 9 GKGGGPPRR 17


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 2 GPGGRPPGR 10
G GG PP R
Sbjct: 9 GKGGGPPRR 17




138|SequenceR|695|686|GRPLEGGPGG

>sp|TGB1_LSV|MOVEMENT and silencing protein TGBp1|Lily symptomless virus (LSV)

Query: 3 PLEGGPG 9
PL+GGPG
Sbjct: 100 PLQGGPG 106


>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 GRPLEGGPGG 10
GRPL GG G
Sbjct: 1400 GRPLPGGELG 1409


>sp|PP220_ASFP4|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 GRPLEGGPGG 10
GRPL GG G
Sbjct: 1399 GRPLPGGELG 1408


>sp|PP220_ASFM2|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 GRPLEGGPGG 10
GRPL GG G
Sbjct: 1400 GRPLPGGELG 1409


>sp|PP220_ASFK5|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 GRPLEGGPGG 10
GRPL GG G
Sbjct: 1400 GRPLPGGELG 1409


>sp|PP220_ASFB7|POLYPROTEIN pp220|African swine fever virus (strain

Query: 1 GRPLEGGPGG 10
GRPL GG G
Sbjct: 1400 GRPLPGGELG 1409


>sp|UL96_EHV2|GENE 35 protein|Equine herpesvirus 2 (strain 86/87)

Query: 3 PLEGGP 8
P+EGGP
Sbjct: 123 PVEGGP 128


>sp|CAPSD_BFDV|CAPSID protein|Beak and feather disease virus

Query: 3 PLEGGP 8
PL+GGP
Sbjct: 197 PLQGGP 202


>sp|UL32_EHV1B|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 GRPLEGGPG 9
GRP +GG G
Sbjct: 259 GRPADGGGG 267


>sp|UL32_EHV1A|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain AB1)

Query: 1 GRPLEGGPG 9
GRP +GG G
Sbjct: 259 GRPADGGGG 267


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 GRPLEGGP 8
GRPL G P
Sbjct: 29 GRPLFGNP 36


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 2 RPLEGGPGG 10
R EGGPG
Sbjct: 1646 RYFEGGPGA 1654


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 1 GRPLEG 6
GRP+EG
Sbjct: 1161 GRPIEG 1166


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1 GRPLEG 6
GRP+EG
Sbjct: 1161 GRPIEG 1166


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 1 GRPLEG 6
GRP+EG
Sbjct: 1161 GRPIEG 1166


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 GRPLEGGP 8
GRPL G P
Sbjct: 29 GRPLFGDP 36


>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human

Query: 4 LEGGPGG 10
LEG PGG
Sbjct: 341 LEGQPGG 347


>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 RPLEGGPGG 10
RPL G GG
Sbjct: 410 RPLPDGTGG 418


>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 RPLEGGPGG 10
RPL G GG
Sbjct: 410 RPLPDGTGG 418


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 4 LEGGPGG 10
LEG PGG
Sbjct: 341 LEGQPGG 347


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 4 LEGGPGG 10
LEG PGG
Sbjct: 341 LEGQPGG 347


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human

Query: 4 LEGGPGG 10
LEG PGG
Sbjct: 341 LEGQPGG 347


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2394 PLEGEPG 2400


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2401 PLEGEPG 2407


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2401 PLEGEPG 2407


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2401 PLEGEPG 2407


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2394 PLEGEPG 2400


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2400 PLEGEPG 2406


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|X_GSHV|PROTEIN X|Ground squirrel hepatitis virus (strain

Query: 2 RPLEGGPGG 10
RPL G P G
Sbjct: 19 RPLRGQPSG 27


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2396 PLEGEPG 2402


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2399 PLEGEPG 2405


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2397 PLEGEPG 2403


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2394 PLEGEPG 2400


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2403 PLEGEPG 2409


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2401 PLEGEPG 2407


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2390 PLEGEPG 2396


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2398 PLEGEPG 2404


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2394 PLEGEPG 2400


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2394 PLEGEPG 2400


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2396 PLEGEPG 2402


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2400 PLEGEPG 2406


>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12

Query: 2 RPLEGGPG 9
RPL GPG
Sbjct: 70 RPLPEGPG 77


>sp|NS1_PAVBP|INITIATOR protein NS1|Bovine parvovirus 1 (BPV-1)

Query: 4 LEGGPGG 10
LEG PGG
Sbjct: 353 LEGMPGG 359


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2396 PLEGEPG 2402


>sp|MATRX_RINDR|MATRIX protein|Rinderpest virus (strain RBOK) (RDV)

Query: 1 GRPLEGGPG 9
GRP GG G
Sbjct: 203 GRPAAGGLG 211


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 3 PLEGGPG 9
PLEG PG
Sbjct: 2394 PLEGEPG 2400




139|SequenceR|700|691|GLGAPGRPLE

>sp|YO21_ADEG1|UNCHARACTERIZED protein ORF21|Fowl adenovirus A serotype 1

Query: 2 LGAPGRPL 9
LG PGRP+
Sbjct: 72 LGPPGRPV 79


>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate

Query: 1 GLGAPGRP 8
G+ PGRP
Sbjct: 532 GINIPGRP 539


>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)

Query: 1 GLGAPGRPL 9
GLGAP RP+
Sbjct: 1176 GLGAPLRPV 1184


>sp|ICP4_SUHVK|MAJOR viral transcription factor ICP4|Suid herpesvirus 1 (strain Kaplan)

Query: 1 GLGAPGRPL 9
GLGAP RP+
Sbjct: 1300 GLGAPLRPV 1308


>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)

Query: 1 GLGAPGRPL 9
GLGAP RP+
Sbjct: 1204 GLGAPLRPV 1212


>sp|ICP4_SUHVF|MAJOR viral transcription factor ICP4|Suid herpesvirus 1 (strain

Query: 1 GLGAPGRPL 9
GLGAP RP+
Sbjct: 1316 GLGAPLRPV 1324




140|SequenceR|705|696|QSRRPGLGAP

>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 3 RRPGLGAP 10
R PGLGAP
Sbjct: 261 RNPGLGAP 268


>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)

Query: 3 RRPGLGAP 10
R PGLGAP
Sbjct: 261 RNPGLGAP 268


>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)

Query: 3 RRPGLGAP 10
R PGLGAP
Sbjct: 261 RNPGLGAP 268


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 3 RRPGLGAP 10
R PGLGAP
Sbjct: 261 RNPGLGAP 268


>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)

Query: 3 RRPGLGAP 10
R PGLGAP
Sbjct: 261 RNPGLGAP 268


>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)

Query: 3 RRPGLGAP 10
R PGLGAP
Sbjct: 261 RNPGLGAP 268


>sp|ITP_PSHV1|INNER tegument protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 RRPGLG 8
RRPGLG
Sbjct: 596 RRPGLG 601


>sp|RASH_MSVHA|TRANSFORMING protein p29|Harvey murine sarcoma virus

Query: 2 SRRPGLGAP 10
+R PGL AP
Sbjct: 41 ARAPGLAAP 49


>sp|UL24_VZVO|PROTEIN UL24 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 3 RRPGLGA 9
RRP LGA
Sbjct: 237 RRPSLGA 243


>sp|UL24_VZVD|PROTEIN UL24 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 RRPGLGA 9
RRP LGA
Sbjct: 237 RRPSLGA 243




141|SequenceR|710|701|KRPGQQSRRP

>sp|VF295_IIV6|UNCHARACTERIZED protein 295L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 KRPGQQSRRP 10
KR G+QS+RP
Sbjct: 288 KREGKQSKRP 297


>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)

Query: 2 RPGQQSRRP 10
RPG +RRP
Sbjct: 4 RPGASTRRP 12


>sp|POLS_AURAV|STRUCTURAL polyprotein|Aura virus (AURAV)

Query: 2 RPGQQS 7
RPGQQS
Sbjct: 499 RPGQQS 504


>sp|US03_PSHV1|PROTEIN kinase US3 homolog|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 KRPGQQSRR 9
K+PG+Q RR
Sbjct: 363 KKPGKQLRR 371




142|SequenceR|715|706|IKRPEKRPGQ

>sp|POLS_SAV3|STRUCTURAL polyprotein|Alphavirus salmon subtype 3 (SAV3)

Query: 1 IKRPEKRPGQ 10
IK+P RPG+
Sbjct: 112 IKKPRNRPGK 121


>sp|GH_PSHV1|ENVELOPE glycoprotein H|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 IKRPEKRP 8
IK PE+RP
Sbjct: 144 IKPPEERP 151


>sp|MATRX_NDVB|MATRIX protein|Newcastle disease virus (strain Beaudette

Query: 1 IKRPEKRPG 9
+K PEK PG
Sbjct: 157 VKAPEKIPG 165


>sp|MATRX_NDVB1|MATRIX protein|Newcastle disease virus (strain Chicken/United

Query: 1 IKRPEKRPG 9
+K PEK PG
Sbjct: 157 VKAPEKIPG 165


>sp|MATRX_NDVA|MATRIX protein|Newcastle disease virus (strain

Query: 1 IKRPEKRPG 9
+K PEK PG
Sbjct: 157 VKAPEKIPG 165


>sp|POLS_SAV2|STRUCTURAL polyprotein|Alphavirus salmon subtype 2 (SAV2)

Query: 2 KRPEKRPGQ 10
K+P RPG+
Sbjct: 114 KKPRNRPGK 122


>sp|VG12_BPP22|REPLICATIVE DNA helicase|Salmonella phage P22 (Bacteriophage P22)

Query: 2 KRPEKRP 8
KRP KRP
Sbjct: 360 KRPNKRP 366


>sp|NS1_BMDNV|INITIATOR protein NS1|Bombyx mori densovirus (BmDNV) (Bombyx

Query: 2 KRPEKRPG 9
K P KRPG
Sbjct: 860 KLPTKRPG 867


>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 IKRPEKRP 8
++RP+KRP
Sbjct: 70 VRRPQKRP 77


>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 IKRPEKRP 8
++RP+KRP
Sbjct: 70 VRRPQKRP 77


>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 IKRPEKRP 8
++RP+KRP
Sbjct: 70 VRRPQKRP 77




143|SequenceR|720|711|LVTAIIKRPE

>sp|YL360_MIMIV|UNCHARACTERIZED protein L360|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LVTAIIKRP 9
L+TAI+K P
Sbjct: 12 LITAILKDP 20




144|SequenceR|725|716|IDETMLVTAI

>sp|VNS3_JDNVP|PUTATIVE non-structural protein NS3|Junonia coenia densovirus (isolate

Query: 1 IDETMLVTAI 10
+DETML+ +
Sbjct: 54 LDETMLIECV 63




145|SequenceR|730|721|AKNLKIDETM

>sp|VP1_AQRVG|OUTER capsid protein VP1|Aquareovirus G (isolate American grass

Query: 1 AKNLKIDETM 10
A+N ID+TM
Sbjct: 684 ARNAAIDQTM 693


>sp|L_TSWV1|RNA-DIRECTED RNA polymerase L|Tomato spotted wilt virus (strain

Query: 1 AKNLKIDE 8
KNLKIDE
Sbjct: 1790 TKNLKIDE 1797


>sp|YR430_MIMIV|PUTATIVE transcription factor R430|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 AKNLKIDE 8
+KNL+IDE
Sbjct: 124 SKNLQIDE 131


>sp|MVP_PVMA|P3N-PIPO polyprotein|Potato virus A (PVA)

Query: 1 AKNLKIDE 8
AKNL +DE
Sbjct: 357 AKNLNMDE 364




146|SequenceR|735|726|KWAKEAKNLK

>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1 KWAKEAK 7
KWAKEAK
Sbjct: 391 KWAKEAK 397


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1 KWAKEAK 7
KWA+EAK
Sbjct: 391 KWAREAK 397


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1 KWAKEAK 7
KWA+EA+
Sbjct: 392 KWAREAR 398


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1 KWAKEAK 7
KWA+EA+
Sbjct: 392 KWAREAR 398


>sp|RLIG_BPT4|RNA ligase 1|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 KWAKEAKN 8
KW +EAKN
Sbjct: 215 KWIEEAKN 222


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 1 KWAKEAKNLK 10
+W K+A+N +
Sbjct: 2134 RWTKDARNTQ 2143


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 1 KWAKEAKNLK 10
+W K+A+N +
Sbjct: 2134 RWTKDARNTQ 2143


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 1 KWAKEAKNLK 10
+W K+A+N +
Sbjct: 2134 RWTKDARNTQ 2143


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1 KWAKEAKNLK 10
+W K+A+N +
Sbjct: 2134 RWTKDARNTQ 2143


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 1 KWAKEAKNLK 10
+W K+A+N +
Sbjct: 2134 RWTKDARNTQ 2143




147|SequenceR|740|731|RKSSPKWAKE

>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 4 SPKWAK 9
+PKWAK
Sbjct: 5542 NPKWAK 5547


>sp|ENV_SMRVH|ENVELOPE glycoprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 3 SSPKW 7
SSPKW
Sbjct: 76 SSPKW 80


>sp|GM_SHV21|ENVELOPE glycoprotein M|Saimiriine herpesvirus 2 (strain 11)

Query: 2 KSSPKWA 8
++SPKW+
Sbjct: 176 RNSPKWS 182


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 4 SPKWAKE 10
+PKWA E
Sbjct: 2057 TPKWAPE 2063


>sp|RLIG_BPT4|RNA ligase 1|Enterobacteria phage T4 (Bacteriophage T4)

Query: 4 SPKWAKE 10
SPKW +E
Sbjct: 213 SPKWIEE 219




148|SequenceR|745|736|KDAATRKSSP

>sp|VP3_EHDVA|CORE protein VP3|Epizootic hemorrhagic disease virus 2

Query: 2 DAATRKSSP 10
DAAT K+SP
Sbjct: 6 DAATPKTSP 14


>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)

Query: 1 KDAATRKSSP 10
+D T+KSSP
Sbjct: 12 RDEDTQKSSP 21




149|SequenceR|750|741|EEGRDKDAAT

>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 2 EGRDKDAAT 10
+G DKDA T
Sbjct: 1843 DGSDKDAPT 1851


>sp|POL1_BRSV|RNA1 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 2 EGRDKDAAT 10
+G DKDA T
Sbjct: 1859 DGSDKDAPT 1867


>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain

Query: 2 EGRDKDAAT 10
+G DKDA T
Sbjct: 1861 DGSDKDAPT 1869




150|SequenceR|755|746|SGDADEEGRD

>sp|POLS_ABPVR|STRUCTURAL polyprotein|Acute bee paralysis virus (strain

Query: 4 ADEEGRD 10
AD+EGRD
Sbjct: 766 ADKEGRD 772


>sp|Z_TAMVU|RING finger protein Z|Tamiami mammarenavirus (isolate Rat/United

Query: 2 GDADEEGR 9
GD D EGR
Sbjct: 14 GDKDPEGR 21


>sp|CAPSD_REOVJ|INNER capsid protein lambda-1|Reovirus type 2 (strain D5/Jones)

Query: 1 SGDADEEGRD 10
SG+ D EG D
Sbjct: 136 SGNVDNEGGD 145


>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41

Query: 2 GDADEEGRD 10
G+ D+EGRD
Sbjct: 443 GEEDQEGRD 451


>sp|REV_HV1MN|PROTEIN Rev|Human immunodeficiency virus type 1

Query: 1 SGDADEE 7
SGD+DEE
Sbjct: 5 SGDSDEE 11


>sp|REV_HV1C4|PROTEIN Rev|Human immunodeficiency virus type 1

Query: 1 SGDADEE 7
SGD+DEE
Sbjct: 5 SGDSDEE 11




151|SequenceR|760|751|LDQTKSGDAD

>sp|RDRP_TRVPS|REPLICASE large subunit|Tobacco rattle virus (strain PSG)

Query: 4 TKSGDAD 10
TKSGDAD
Sbjct: 7 TKSGDAD 13


>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)

Query: 3 QTKSGDAD 10
Q KSGDAD
Sbjct: 1511 QQKSGDAD 1518


>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)

Query: 3 QTKSGDAD 10
Q KSGDAD
Sbjct: 1511 QQKSGDAD 1518


>sp|CAPSD_BPE32|MAJOR capsid protein|Escherichia phage Phieco32 (Escherichia coli

Query: 1 LDQTKSGDAD 10
+D+TK+G AD
Sbjct: 181 VDKTKNGPAD 190


>sp|MVP_MYMVV|MOVEMENT protein BC1|Mungbean yellow mosaic virus (strain

Query: 1 LDQTKSGDAD 10
LD T + DAD
Sbjct: 233 LDNTSASDAD 242




152|SequenceR|765|756|RVRRFLDQTK

>sp|CAPSD_PAVHH|CAPSID protein VP1|Hamster parvovirus H1

Query: 3 RRFLDQTK 10
+RF+DQTK
Sbjct: 65 QRFIDQTK 72


>sp|CAPSD_PAVCN|CAPSID protein VP1|Canine parvovirus type 2 (isolate

Query: 3 RRFLDQTK 10
+RF+DQTK
Sbjct: 65 QRFIDQTK 72


>sp|CAPSD_PAVCD|CAPSID protein VP1|Canine parvovirustype 2 (isolate Dog/United

Query: 3 RRFLDQTK 10
+RF+DQTK
Sbjct: 65 QRFIDQTK 72


>sp|CAPSD_PAVCB|CAPSID protein VP1|Canine parvovirus type 2 (isolate

Query: 3 RRFLDQTK 10
+RF+DQTK
Sbjct: 65 QRFIDQTK 72


>sp|CAPSD_PAVC7|CAPSID protein VP1|Canine parvovirus type 2 (strain

Query: 3 RRFLDQTK 10
+RF+DQTK
Sbjct: 65 QRFIDQTK 72


>sp|CAPSD_MUMIP|CAPSID protein VP1|Murine minute virus (strain MVM

Query: 3 RRFLDQTK 10
+RF+DQTK
Sbjct: 65 QRFIDQTK 72


>sp|CAPSD_MUMIM|CAPSID protein VP1|Murine minute virus (strain MVMi)

Query: 3 RRFLDQTK 10
+RF+DQTK
Sbjct: 65 QRFIDQTK 72


>sp|CAPSD_MEVA|CAPSID protein VP1|Mink enteritis virus (strain Abashiri)

Query: 3 RRFLDQTK 10
+RF+DQTK
Sbjct: 60 QRFIDQTK 67


>sp|CAPSD_FPV19|CAPSID protein VP1|Feline panleukopenia virus (strain 193)

Query: 3 RRFLDQTK 10
+RF+DQTK
Sbjct: 65 QRFIDQTK 72


>sp|CAPSD_FPV|CAPSID protein VP1|Feline panleukopenia virus (FPV)

Query: 3 RRFLDQTK 10
+RF+DQTK
Sbjct: 65 QRFIDQTK 72


>sp|CAPSD_PAVL3|CAPSID protein VP1|Parvovirus LuIII

Query: 3 RRFLDQTK 10
+RF+DQTK
Sbjct: 65 QRFIDQTK 72


>sp|CATV_NPVMC|VIRAL cathepsin|Mamestra configurata nucleopolyhedrovirus (MacoNPV)

Query: 1 RVRRFLDQTK 10
++ RF D TK
Sbjct: 84 KINRFADMTK 93




153|SequenceR|770|761|KNLISRVRRF

***** No hits found ******


154|SequenceR|775|766|MQPTLKNLIS

>sp|VP39_NPVLD|MAJOR capsid protein|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 1 MQPTLKNLIS 10
M P LKNLI+
Sbjct: 194 MPPFLKNLIN 203


>sp|SHUT_EHV1V|VIRION host shutoff protein|Equine herpesvirus 1 (strain V592)

Query: 4 TLKNLIS 10
TLKNL+S
Sbjct: 451 TLKNLVS 457


>sp|SHUT_EHV1B|VIRION host shutoff protein|Equine herpesvirus 1 (strain Ab4p)

Query: 4 TLKNLIS 10
TLKNL+S
Sbjct: 451 TLKNLVS 457




155|SequenceR|780|771|MLQQFMQPTL

***** No hits found ******


156|SequenceR|785|776|QTVQKMLQQF

>sp|RDRP_BMV|RNA-DIRECTED RNA polymerase 2a|Brome mosaic virus (BMV)

Query: 2 TVQKMLQQF 10
TVQ+M+QQF
Sbjct: 80 TVQQMVQQF 88


>sp|RDRP_REOVL|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 1 (strain Lang)

Query: 1 QTVQKMLQ 8
+T+QKML+
Sbjct: 751 ETIQKMLE 758


>sp|RDRP_REOVJ|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 2 (strain D5/Jones)

Query: 1 QTVQKMLQ 8
+T+QKML+
Sbjct: 751 ETIQKMLE 758




157|SequenceR|790|781|TDIALQTVQK

>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10

Query: 2 DIALQTVQK 10
D+A+QTV++
Sbjct: 81 DVAVQTVKR 89




158|SequenceR|795|786|KLREETDIAL

>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 2 LREETDIAL 10
LREE D+AL
Sbjct: 2418 LREELDVAL 2426


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 2 LREETDIAL 10
LREE D+AL
Sbjct: 2418 LREELDVAL 2426




159|SequenceR|800|791|LDIVGKLREE

>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 2 DIVGKLR 8
DI+GKLR
Sbjct: 272 DIIGKLR 278


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 IVGKLREE 10
IVGKLR++
Sbjct: 356 IVGKLRKQ 363


>sp|VIE2_MUHVS|IMMEDIATE-EARLY protein 2|Murid herpesvirus 1 (strain Smith)

Query: 1 LDIVGKLREE 10
LD+ KLR+E
Sbjct: 137 LDVAEKLRKE 146


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 2 DIVGKLRE 9
DIVG++RE
Sbjct: 225 DIVGEVRE 232


>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 1 LDIVGKLREE 10
+++ GKLR+E
Sbjct: 1734 VELFGKLRDE 1743


>sp|420R_IIV6|PUTATIVE MSV199 domain-containing protein 420R|Invertebrate iridescent virus

Query: 2 DIVGKLREE 10
DI+GK R++
Sbjct: 296 DIIGKFRDK 304


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 2 DIVGKLREE 10
D++ K+REE
Sbjct: 658 DLIDKIREE 666


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra

Query: 2 DIVGKLREE 10
D++ K+REE
Sbjct: 656 DLIDKIREE 664




160|SequenceR|805|796|AKEFILDIVG

>sp|Y32K_BNYVG|RNA-4 uncharacterized 31.9 kDa protein|Beet necrotic yellow vein mosaic

Query: 2 KEFILDIVG 10
K+FI D+VG
Sbjct: 228 KQFICDLVG 236


>sp|P31_BNYVS|31 kDa protein|Beet necrotic yellow vein virus

Query: 2 KEFILDIVG 10
K+FI D+VG
Sbjct: 228 KQFICDLVG 236


>sp|006L_IIV6|PUTATIVE KilA-N domain-containing protein 006L|Invertebrate iridescent virus

Query: 2 KEFILDI 8
KEFILDI
Sbjct: 98 KEFILDI 104


>sp|YG1_MDBVW|UNCHARACTERIZED protein G1|Microplitis demolitor bracovirus (isolate Webb)

Query: 3 EFILDIVG 10
E +LDIVG
Sbjct: 84 EILLDIVG 91


>sp|POL2_CPSMV|RNA2 polyprotein|Cowpea severe mosaic virus (strain

Query: 2 KEFILDIVG 10
KEF +DI G
Sbjct: 923 KEFSIDICG 931




161|SequenceR|810|801|NPESIAKEFI

>sp|PTP_NPVAC|TYROSINE-PROTEIN phosphatase|Autographa californica nuclear polyhedrosis virus

Query: 2 PESIAKEFI 10
PESI +EFI
Sbjct: 92 PESIVQEFI 100


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 1 NPESIAKEF 9
NPE + KEF
Sbjct: 262 NPEGLIKEF 270


>sp|SCAF_ALHV1|CAPSID scaffolding protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 NPESIAKEFI 10
NP+ KEFI
Sbjct: 435 NPDKFPKEFI 444




162|SequenceR|815|806|YAVSFNPESI

>sp|VG64_BPMD2|GENE 64 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 YAVSFNPESI 10
Y V+F P+SI
Sbjct: 122 YQVNFKPQSI 131


>sp|P1_BPPH6|MAJOR inner protein P1|Pseudomonas phage phi6 (Bacteriophage phi-6)

Query: 1 YAVSFNPESI 10
YAV+ NPE +
Sbjct: 493 YAVAHNPEVV 502


>sp|VME1_IBVG|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 SFNPES 9
SFNPES
Sbjct: 110 SFNPES 115


>sp|VME1_BC133|MEMBRANE protein|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 4 SFNPES 9
SFNPES
Sbjct: 110 SFNPES 115


>sp|VME1_BCHK5|MEMBRANE protein|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 4 SFNPES 9
SFNPES
Sbjct: 111 SFNPES 116


>sp|VME1_BCHK4|MEMBRANE protein|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 4 SFNPES 9
SFNPES
Sbjct: 110 SFNPES 115


>sp|RDRP_FXMV|RNA replication protein|Foxtail mosaic virus

Query: 1 YAVSFNPESI 10
YA+ +NP S+
Sbjct: 53 YAIPYNPYSL 62


>sp|YL223_MIMIV|UNCHARACTERIZED protein L223|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 FNPESI 10
FNPESI
Sbjct: 57 FNPESI 62


>sp|VME1_IBVK|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 SFNPES 9
SFNPES
Sbjct: 112 SFNPES 117


>sp|VME1_IBVBU|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 SFNPES 9
SFNPES
Sbjct: 112 SFNPES 117


>sp|VME1_IBVB2|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 SFNPES 9
SFNPES
Sbjct: 112 SFNPES 117


>sp|VME1_IBVBC|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 SFNPES 9
SFNPES
Sbjct: 112 SFNPES 117


>sp|VME1_IBVB|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 SFNPES 9
SFNPES
Sbjct: 112 SFNPES 117


>sp|VME1_IBVM|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 SFNPES 9
SFNPES
Sbjct: 112 SFNPES 117


>sp|VME1_IBVH5|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 SFNPES 9
SFNPES
Sbjct: 112 SFNPES 117


>sp|VME1_IBVH1|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 SFNPES 9
SFNPES
Sbjct: 112 SFNPES 117


>sp|VME1_IBVD1|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 SFNPES 9
SFNPES
Sbjct: 112 SFNPES 117


>sp|VME1_IBV41|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 SFNPES 9
SFNPES
Sbjct: 112 SFNPES 117


>sp|VME1_IBVDE|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 SFNPES 9
SFNPES
Sbjct: 112 SFNPES 117


>sp|YR722_MIMIV|UNCHARACTERIZED protein R722|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YAVSFNPE 8
+A SFNPE
Sbjct: 558 FAESFNPE 565


>sp|YR739_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus

Query: 1 YAVSFNPESI 10
+ ++ NPESI
Sbjct: 103 FGMTINPESI 112


>sp|PRIM_GAHVM|DNA primase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 YAVSFNP 7
YAVS NP
Sbjct: 277 YAVSVNP 283




163|SequenceR|820|811|RCMNAYAVSF

>sp|VG02_EHV1B|UNCHARACTERIZED gene 2 protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 RCMNAYAVS 9
RC +AYA S
Sbjct: 114 RCTDAYAES 122


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 2 CMNAYAVSF 10
C N YAV F
Sbjct: 602 CANIYAVGF 610


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 CMNAYAVSF 10
C N YAV F
Sbjct: 602 CANIYAVGF 610


>sp|VIF_SIVGB|VIRION infectivity factor|Simian immunodeficiency virus (isolate GB1)

Query: 2 CMNAYAVS 9
C++ YAVS
Sbjct: 84 CLSTYAVS 91




164|SequenceR|825|816|LAMLCRCMNA

>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain

Query: 3 MLCRCMNA 10
M+C+CM A
Sbjct: 177 MVCKCMTA 184


>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain

Query: 3 MLCRCMNA 10
M+C+CM A
Sbjct: 177 MVCKCMTA 184


>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain

Query: 3 MLCRCMNA 10
M+C+CM A
Sbjct: 177 MVCKCMTA 184


>sp|NCAP_MUMPV|NUCLEOPROTEIN orthorubulavirus (MuV)

Query: 3 MLCRCMNA 10
M+C+CM A
Sbjct: 177 MVCKCMTA 184


>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain

Query: 3 MLCRCMNA 10
M+C+CM A
Sbjct: 177 MVCKCMTA 184


>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain

Query: 3 MLCRCMNA 10
M+C+CM A
Sbjct: 177 MVCKCMTA 184


>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)

Query: 3 MLCRCMNA 10
M+C+CM A
Sbjct: 177 MVCKCMTA 184


>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)

Query: 3 MLCRCMNA 10
M+C+CM A
Sbjct: 177 MVCKCMTA 184


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1 LAMLCRCMNA 10
LA+LC+C+++
Sbjct: 1292 LALLCQCISS 1301


>sp|1A_PSVJ|REPLICATION protein 1a|Peanut stunt virus (strain J)

Query: 4 LCRCMNA 10
LCR MNA
Sbjct: 195 LCRAMNA 201


>sp|YR665_MIMIV|UNCHARACTERIZED protein R665|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LAMLCRCM 8
LAML RC+
Sbjct: 382 LAMLTRCL 389


>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)

Query: 2 AMLCRCM 8
+MLC+CM
Sbjct: 382 SMLCKCM 388


>sp|NPH2_MSEPV|RNA helicase NPH-II|Melanoplus sanguinipes entomopoxvirus (MsEPV)

Query: 1 LAMLCRCMN 9
L + CRC+N
Sbjct: 655 LNVRCRCIN 663


>sp|R1AB_CVPFS|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 5 CRCMNA 10
CRC NA
Sbjct: 486 CRCNNA 491


>sp|R1AB_CVCAI|REPLICASE polyprotein 1ab|Canine coronavirus (strain Insavc-1) (CCoV)

Query: 5 CRCMNA 10
CRC NA
Sbjct: 121 CRCNNA 126


>sp|FUS_SV41|FUSION glycoprotein F0|Simian virus 41 (SV41)

Query: 2 AMLCRCMN 9
A+LCRC +
Sbjct: 389 ALLCRCAD 396


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1 LAMLCRCMNA 10
+ MLC C+++
Sbjct: 1252 IEMLCNCISS 1261


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1 LAMLCRCMNA 10
+ MLC C+++
Sbjct: 1243 IEMLCNCISS 1252


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1 LAMLCRCMNA 10
+ MLC C+++
Sbjct: 1244 IEMLCNCISS 1253


>sp|YL122_MIMIV|PUTATIVE ankyrin repeat protein L122|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 AMLCRCMN 9
A++C C+N
Sbjct: 267 ALMCACIN 274


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 5 CRCMNA 10
CRC NA
Sbjct: 6662 CRCNNA 6667


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 5 CRCMNA 10
CRC NA
Sbjct: 6637 CRCNNA 6642


>sp|R1AB_CVPR8|REPLICASE polyprotein 1ab|Porcine respiratory coronavirus (strain 86/137004

Query: 5 CRCMNA 10
CRC NA
Sbjct: 84 CRCNNA 89




165|SequenceR|830|821|TTPVKLAMLC

>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 TTPVKLAMLC 10
T+PV LAM+C
Sbjct: 575 TSPVTLAMVC 584


>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 TTPVKLAMLC 10
T+PV LAM+C
Sbjct: 575 TSPVTLAMVC 584


>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 TTPVKLAMLC 10
T+PV LAM+C
Sbjct: 574 TSPVTLAMVC 583


>sp|CAPSD_SJNNV|CAPSID protein alpha|Striped jack nervous necrosis virus

Query: 1 TTPVKLAMLC 10
T+P +L +LC
Sbjct: 178 TSPGRLVLLC 187


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 1 TTPVKLAMLC 10
T P LA+LC
Sbjct: 726 TVPTALAVLC 735




166|SequenceR|835|826|VTPKETTPVK

>sp|ITP_GAHVM|INNER tegument protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 VTPKETTP 8
+TP+ TTP
Sbjct: 600 ITPESTTP 607


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
V+P ET PVK
Sbjct: 583 VSPIETVPVK 592


>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 VTPKETTP 8
+TPK+T P
Sbjct: 154 ITPKKTKP 161


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 585 ISPIETVPVK 594


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 590 ISPIETVPVK 599


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 588 ISPIETVPVK 597


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 591 ISPIETVPVK 600


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 587 ISPIETVPVK 596


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 594 ISPIETVPVK 603


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 584 ISPIETVPVK 593


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 582 ISPIETVPVK 591


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 593 ISPIETVPVK 602


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 589 ISPIETVPVK 598


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 593 ISPIETVPVK 602


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 599 ISPIETVPVK 608


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 589 ISPIETVPVK 598


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 589 ISPIETVPVK 598


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 590 ISPIETVPVK 599


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 599 ISPIETVPVK 608


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 586 ISPIETVPVK 595


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 586 ISPIETVPVK 595


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 584 ISPIETVPVK 593


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 601 ISPIETVPVK 610


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 601 ISPIETVPVK 610


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 589 ISPIETVPVK 598


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 589 ISPIETVPVK 598


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 586 ISPIETVPVK 595


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 589 ISPIETVPVK 598


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 589 ISPIETVPVK 598


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 589 ISPIETVPVK 598


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 588 ISPIETVPVK 597


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 595 ISPIETVPVK 604


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 601 ISPIETVPVK 610


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 584 ISPIETVPVK 593


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 584 ISPIETVPVK 593


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 VTPKETTPV 9
V PK TPV
Sbjct: 3536 VPPKRNTPV 3544


>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 VTPKETTP 8
+TPK+T P
Sbjct: 154 ITPKKTKP 161


>sp|POL_SIVEK|GAG-POL polyprotein|Simian immunodeficiency virus (isolate EK505)

Query: 1 VTPKETTPVK 10
++P ET PVK
Sbjct: 598 ISPIETIPVK 607




167|SequenceR|840|831|RFNVTVTPKE

>sp|POLG_ASGVP|GENOME polyprotein|Apple stem grooving virus (strain

Query: 2 FNVTVTPKE 10
+N+T TPKE
Sbjct: 1957 YNLTTTPKE 1965


>sp|POLG_ASGVK|GENOME polyprotein|Apple stem grooving virus (strain

Query: 2 FNVTVTPKE 10
+N+T TPKE
Sbjct: 1957 YNLTTTPKE 1965


>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 FNVTVTPK 9
FN+TV P+
Sbjct: 173 FNLTVVPR 180


>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 FNVTVTPK 9
FN+TV P+
Sbjct: 169 FNLTVVPR 176


>sp|Y115_AFV1Y|UNCHARACTERIZED protein ORF115|Acidianus filamentous virus 1 (isolate

Query: 1 RFNVTVTP 8
R NV VTP
Sbjct: 45 RLNVAVTP 52


>sp|CAPSD_BPPP4|MAJOR capsid protein|Pseudomonas phage PaMx41

Query: 2 FNVTVTPKE 10
FN T+ P+E
Sbjct: 8 FNTTLNPQE 16




168|SequenceR|845|836|NLLLKRFNVT

>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 1 NLLLKRFN 8
NLLL RFN
Sbjct: 674 NLLLNRFN 681


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 1 NLLLKRFN 8
NLLL RFN
Sbjct: 674 NLLLNRFN 681


>sp|RDRP_QRFVE|RNA-DIRECTED RNA polymerase catalytic subunit|Quaranfil virus (isolate

Query: 4 LKRFNVT 10
LKRFN T
Sbjct: 684 LKRFNAT 690


>sp|KITH_GAHVR|THYMIDINE kinase|Gallid herpesvirus 2 (strain RB-1b)

Query: 1 NLLLKRFNVT 10
N+ ++RFN+T
Sbjct: 299 NINVERFNIT 308


>sp|KITH_GAHVM|THYMIDINE kinase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 NLLLKRFNVT 10
N+ ++RFN+T
Sbjct: 299 NINVERFNIT 308


>sp|NS1_DSDNV|INITIATOR protein NS1|Diatraea saccharalis densovirus (DsDNV)

Query: 2 LLLKRFNVT 10
LLL ++N+T
Sbjct: 536 LLLSKYNIT 544


>sp|NS1_JDNVP|INITIATOR protein NS1|Junonia coenia densovirus (isolate pBRJ/1990)

Query: 2 LLLKRFNVT 10
LLL ++N+T
Sbjct: 536 LLLSKYNIT 544




169|SequenceR|850|841|EKQCRNLLLK

>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 4 CRNLLLK 10
CRNLLLK
Sbjct: 776 CRNLLLK 782


>sp|CHMA_BP201|CHIMALLIN phage 201phi2-1 (Pseudomonas chlororaphis

Query: 1 EKQCRNLLLK 10
E Q RNLL+K
Sbjct: 203 ELQLRNLLIK 212


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 QCRNLLL 9
+CRN+LL
Sbjct: 1326 ECRNILL 1332


>sp|RDRP_SCV23|RNA-DIRECTED RNA polymerase|Saccharomyces 23S RNA narnavirus (ScNV-23S)

Query: 2 KQCRNLLLK 10
++CRN +LK
Sbjct: 780 RKCRNPMLK 788


>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)

Query: 1 EKQCRNLL 8
E+QC NL+
Sbjct: 430 ERQCYNLI 437


>sp|YL540_MIMIV|PUTATIVE ATP-dependent RNA helicase L540|Acanthamoeba polyphaga mimivirus

Query: 1 EKQCRNLLLK 10
EKQ NLLL+
Sbjct: 523 EKQAANLLLE 532


>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 4 CRNLLLK 10
CR LLLK
Sbjct: 775 CRTLLLK 781




170|SequenceR|855|846|KDKEFEKQCR

>sp|P7_RGDV|PROTEIN P7|Rice gall dwarf virus (RGDV)

Query: 1 KDKEFEKQC 9
KD+EF K+C
Sbjct: 306 KDEEFFKKC 314


>sp|RPOL_BPSP6|DNA-DIRECTED RNA polymerase|Enterobacteria phage SP6 (Bacteriophage SP6)

Query: 2 DKEFEKQCR 10
D+EF+ CR
Sbjct: 476 DEEFQDMCR 484




171|SequenceR|860|851|VEDDDKDKEF

>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1 VEDDDKDKE 9
++DDD D E
Sbjct: 2385 LDDDDSDNE 2393


>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 EDDDKDKEF 10
EDDD+D +
Sbjct: 725 EDDDEDPTY 733


>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 EDDDKDKEF 10
EDDD+D +
Sbjct: 724 EDDDEDPTY 732


>sp|HBSAG_HHBV|LARGE envelope protein|Heron hepatitis B virus (HHBV)

Query: 2 EDDDKDKEF 10
E+D K KEF
Sbjct: 93 EEDKKAKEF 101


>sp|CVC1_EHV1B|CAPSID vertex component 1|Equine herpesvirus 1 (strain Ab4p)

Query: 1 VEDDDKD 7
+EDDDK+
Sbjct: 239 LEDDDKE 245


>sp|YR267_MIMIV|PUTATIVE ankyrin repeat protein R267|Acanthamoeba polyphaga mimivirus

Query: 1 VEDDDKDKEF 10
V+D D DK F
Sbjct: 81 VKDPDNDKSF 90


>sp|HELI1_HVAVE|PUTATIVE ATP-dependent RNA helicase|Heliothis virescens ascovirus 3e

Query: 2 EDDDKD 7
EDDD+D
Sbjct: 42 EDDDRD 47




172|SequenceR|865|856|QKKEFVEDDD

>sp|PORTL_LAMBD|PORTAL protein B|Escherichia phage lambda (Bacteriophage lambda)

Query: 3 KEFVEDD 9
KEF EDD
Sbjct: 116 KEFAEDD 122


>sp|MOBB_BPT4|PROBABLE mobile endonuclease B|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 KEFVEDDD 10
KEF +DDD
Sbjct: 108 KEFWKDDD 115


>sp|VF282_IIV3|PUTATIVE transcription factor 079L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 KKEFVEDDD 10
K EF++DDD
Sbjct: 165 KTEFIKDDD 173


>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)

Query: 1 QKKEFVEDDD 10
+KK + EDDD
Sbjct: 403 KKKRYREDDD 412




173|SequenceR|870|861|EDMEKQKKEF

>sp|ENV_SRV2R|ENVELOPE glycoprotein|Simian retrovirus SRV-2 (isolate 2R-18B1)

Query: 1 EDMEKQKKE 9
ED+EK++KE
Sbjct: 489 EDLEKRRKE 497


>sp|ENV_SRV2|ENVELOPE glycoprotein|Simian retrovirus SRV-2

Query: 1 EDMEKQKKE 9
ED+EK++KE
Sbjct: 489 EDLEKRRKE 497


>sp|ENV_SMRVH|ENVELOPE glycoprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 1 EDMEKQKK 8
ED+EK++K
Sbjct: 493 EDLEKRRK 500


>sp|RPOB_NPVOP|PROBABLE DNA-directed RNA polymerase subunit|Orgyia pseudotsugata

Query: 1 EDMEKQKKEF 10
+ M KQKK+F
Sbjct: 346 QKMLKQKKDF 355


>sp|VG50_BPML5|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate

Query: 1 EDMEKQKK 8
EDM KQK+
Sbjct: 323 EDMPKQKR 330


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 EDMEKQKKEF 10
E +KQKKE+
Sbjct: 165 EIRDKQKKEY 174




174|SequenceR|875|866|EATAAEDMEK

>sp|CAPSD_JDNVP|CAPSID protein VP1|Junonia coenia densovirus (isolate pBRJ/1990)

Query: 1 EATAAEDME 9
E+TA ED+E
Sbjct: 21 ESTATEDIE 29




175|SequenceR|880|871|LRGREEATAA

>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 1 LRGREEATAA 10
LR +EEATA
Sbjct: 1216 LRAQEEATAG 1225




176|SequenceR|885|876|ELEEKLRGRE

>sp|MVP_PSBMV|P3N-PIPO polyprotein|Pea seed-borne mosaic virus (strain

Query: 1 ELEEKLRGR 9
+LEEKLR R
Sbjct: 167 KLEEKLRAR 175


>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 1 ELEEKLRGR 9
+LEEKLR R
Sbjct: 167 KLEEKLRAR 175


>sp|ITP_EHV2|INNER tegument protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 ELEEKLRGR 9
ELE LRGR
Sbjct: 563 ELEAMLRGR 571


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1733 EMEEALRG 1740


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1733 EMEEALRG 1740


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1729 EMEEALRG 1736


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1704 EMEEALRG 1711


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1704 EMEEALRG 1711


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1704 EMEEALRG 1711


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1704 EMEEALRG 1711


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1704 EMEEALRG 1711


>sp|Y1940_ATV|PROTEIN ORF1940|Acidianus two-tailed virus (ATV)

Query: 1 ELEEKLRGRE 10
E+E +LRG++
Sbjct: 1622 EIETRLRGKK 1631


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1295 EMEEALRG 1302


>sp|GP59_BPT7|PROBABLE RecBCD inhibitor gp5.9|Escherichia phage T7 (Bacteriophage T7)

Query: 1 ELEEKLRG 8
ELEEKL G
Sbjct: 43 ELEEKLNG 50


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1705 EMEEALRG 1712


>sp|V59_BPT3|GENE 5.9 protein|Enterobacteria phage T3 (Bacteriophage T3)

Query: 1 ELEEKLRG 8
ELEEKL G
Sbjct: 43 ELEEKLNG 50


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1705 EMEEALRG 1712


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1705 EMEEALRG 1712


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1705 EMEEALRG 1712


>sp|RPO1_MIMIV|DNA-DIRECTED RNA polymerase subunit 1|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LEEKLRGRE 10
+ E+LRG+E
Sbjct: 333 MSERLRGKE 341


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1705 EMEEALRG 1712


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1705 EMEEALRG 1712


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 ELEEKLRG 8
E+EE LRG
Sbjct: 1705 EMEEALRG 1712




177|SequenceR|890|881|IDRAEELEEK

>sp|NS1_PAVBP|INITIATOR protein NS1|Bovine parvovirus 1 (BPV-1)

Query: 2 DRAEELEE 9
DRAEE+EE
Sbjct: 692 DRAEEIEE 699


>sp|NIFSL_ASFWA|NIFS-LIKE protein|African swine fever virus (isolate

Query: 3 RAEELEEK 10
RAEEL++K
Sbjct: 304 RAEELQKK 311


>sp|NIFSL_ASFP4|NIFS-LIKE protein|African swine fever virus (isolate

Query: 3 RAEELEEK 10
RAEEL++K
Sbjct: 305 RAEELQKK 312


>sp|NIFSL_ASFB7|NIFS-LIKE protein|African swine fever virus (strain

Query: 3 RAEELEEK 10
RAEEL++K
Sbjct: 301 RAEELQKK 308


>sp|NS1AB_ANV1|NON-STRUCTURAL polyprotein 1AB|Avian nephritis virus 1 (ANV-1)

Query: 2 DRAEELEEK 10
DRAEEL K
Sbjct: 857 DRAEELYNK 865


>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 1 IDRAEELEE 9
IDRAEE+ E
Sbjct: 681 IDRAEEIIE 689




178|SequenceR|895|886|SRRRAIDRAE

***** No hits found ******


179|SequenceR|900|891|KINGLSRRRA

>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)

Query: 1 KINGLSRRRA 10
K++ LSRRRA
Sbjct: 107 KVHALSRRRA 116


>sp|TRM1_TUHV2|TRIPARTITE terminase subunit 1|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 2 INGLSRRRA 10
ING RRRA
Sbjct: 522 INGFIRRRA 530




180|SequenceR|905|896|LEGIFKINGL

>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2 EGIFKINGL 10
E FK+NGL
Sbjct: 1093 ETYFKVNGL 1101


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2 EGIFKINGL 10
E FK+NGL
Sbjct: 1113 ETYFKVNGL 1121


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2 EGIFKINGL 10
E FK+NGL
Sbjct: 1143 ETYFKVNGL 1151


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2 EGIFKINGL 10
E FK+NGL
Sbjct: 1093 ETYFKVNGL 1101


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2 EGIFKINGL 10
E FK+NGL
Sbjct: 1113 ETYFKVNGL 1121


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2 EGIFKINGL 10
E FK+NGL
Sbjct: 1143 ETYFKVNGL 1151


>sp|VP03_EHV2|PROBABLE membrane antigen 3|Equine herpesvirus 2 (strain 86/87)

Query: 1 LEGIFKING 9
LEG+FK G
Sbjct: 549 LEGVFKTFG 557


>sp|YR390_MIMIV|UNCHARACTERIZED protein R390|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LEGIFKING 9
++GI+ ING
Sbjct: 74 IDGIYNING 82




181|SequenceR|910|901|MKLKFLEGIF

>sp|SYR_MIMIV|ARGININE--TRNA ligase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 MKLKFLEGI 9
MKL F+EGI
Sbjct: 309 MKLMFVEGI 317


>sp|YR610_MIMIV|UNCHARACTERIZED protein R610|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KLKFLEGIF 10
K+ FLEG++
Sbjct: 27 KVGFLEGVY 35


>sp|D5_FOWPN|PRIMASE D5|Fowlpox virus (strain NVSL) (FPV)

Query: 2 KLKFLEGIF 10
KL+FL G++
Sbjct: 416 KLQFLNGVY 424




182|SequenceR|915|906|IAETLMKLKF

***** No hits found ******


183|SequenceR|920|911|VCDHMIAETL

>sp|FIBD_BPBPP|TAIL fiber receptor-binding protein|Bordetella phage BPP-1

Query: 1 VCDHMIAE 8
VCDH+I E
Sbjct: 374 VCDHLILE 381


>sp|RDRP_OUMVV|RNA-DEPENDENT RNA polymerase|Ourmia melon virus (isolate Melon/Iran/VE9)

Query: 1 VCDHMIAE 8
VCDH++++
Sbjct: 427 VCDHLLSD 434


>sp|BP29_BPHC1|PUTATIVE baseplate protein gp29|Haemophilus phage HP1 (strain HP1c1)

Query: 3 DHMIAETL 10
DH+IAE L
Sbjct: 61 DHLIAEIL 68


>sp|TRM1_PSHV1|TRIPARTITE terminase subunit 1|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 VCDHMIAE 8
VCDH++ +
Sbjct: 256 VCDHLVKQ 263


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 VCDHMIAETL 10
+CDHM+ L
Sbjct: 4614 MCDHMVKSGL 4623


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 VCDHMIAETL 10
+CDHM+ L
Sbjct: 4621 MCDHMVKSGL 4630


>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate

Query: 3 DHMIAETL 10
DH+IAE L
Sbjct: 394 DHLIAEML 401


>sp|MCP_SHV21|MAJOR capsid protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 CDHMIAETL 10
CD M+A TL
Sbjct: 945 CDPMVAATL 953


>sp|P7_RGDV|PROTEIN P7|Rice gall dwarf virus (RGDV)

Query: 1 VCDHMIA 7
VC+H+IA
Sbjct: 315 VCNHIIA 321


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2 CDHMIAETL 10
CD+++AE L
Sbjct: 1092 CDNILAEAL 1100


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2 CDHMIAETL 10
CD+++AE L
Sbjct: 1092 CDNILAEAL 1100


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 CDHMIAETL 10
CDHM+ L
Sbjct: 4571 CDHMVKAGL 4579




184|SequenceR|925|916|KLLKVVCDHM

>sp|TRM1_SUHVF|TRIPARTITE terminase subunit 1|Suid herpesvirus 1 (strain Indiana-Funkhauser

Query: 1 KLLKVVCDHM 10
+LL VCDH+
Sbjct: 195 RLLGCVCDHL 204


>sp|MCP_SHV21|MAJOR capsid protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 LLKVVCDHM 10
+LK +C HM
Sbjct: 652 MLKFICTHM 660


>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 KLLKVVCDHM 10
+LL +CDH+
Sbjct: 219 RLLGCICDHV 228


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 2 LLKVVCDHM 10
L++V+C HM
Sbjct: 554 LVEVICAHM 562


>sp|DUTP_ASFWA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|African swine fever virus

Query: 3 LKVVCDHM 10
+KV C+HM
Sbjct: 53 IKVACEHM 60


>sp|DUTP_ASFP4|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|African swine fever virus

Query: 3 LKVVCDHM 10
+KV C+HM
Sbjct: 53 IKVACEHM 60


>sp|DUTP_ASFB7|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|African swine fever virus

Query: 3 LKVVCDHM 10
+KV C+HM
Sbjct: 53 IKVACEHM 60


>sp|DUTP_ASFM2|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|African swine fever virus

Query: 3 LKVVCDHM 10
+KV C+HM
Sbjct: 53 IKVACEHM 60


>sp|Y023_OSHVF|UNCHARACTERIZED protein ORF23|Ostreid herpesvirus 1 (isolate France)

Query: 1 KLLKVVCDH 9
KLL+ +CD+
Sbjct: 679 KLLEYICDY 687


Query: 1 KLLKVVCDH 9
KL+K+V DH
Sbjct: 614 KLIKLVNDH 622


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 4 KVVCDHM 10
KVVCD M
Sbjct: 1124 KVVCDMM 1130


>sp|Y148_TNAVC|UNCHARACTERIZED protein ORF148|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 1 KLLKVVCDHM 10
K+LK+V HM
Sbjct: 6 KILKIVKQHM 15




185|SequenceR|930|921|EEDHNKLLKV

>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 1 EEDHNKLLKV 10
+E+H+K++KV
Sbjct: 988 QEEHDKIMKV 997


>sp|POL_SIVTN|GAG-POL polyprotein|Simian immunodeficiency virus (isolate TAN1)

Query: 1 EEDHNKLLK 9
EE+H KL+K
Sbjct: 809 EEEHRKLIK 817


>sp|HN_PI3B|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (BPIV-3)

Query: 1 EEDHNKLL 8
E +HNKL+
Sbjct: 58 ENNHNKLM 65


>sp|P64_BYVU|64 kDa protein|Beet yellows virus (isolate Ukraine)

Query: 1 EEDHNKLLKV 10
E+D N+L+KV
Sbjct: 330 EDDSNELIKV 339


>sp|VPN7_BPPHE|TAIL fiber protein|Enterococcus phage phiEF24C (Enterococcus bacteriophage

Query: 1 EEDHNKLLK 9
+ED+N+L+K
Sbjct: 1352 KEDYNRLIK 1360


>sp|L_PIRVV|RNA-DIRECTED RNA polymerase L|Pirital mammarenavirus (isolate

Query: 1 EEDHNKLLKV 10
E+D+ KL++V
Sbjct: 116 EQDYTKLMQV 125


>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain

Query: 1 EEDHNKLL 8
+ DHN+LL
Sbjct: 474 DSDHNELL 481




186|SequenceR|935|926|LCELSEEDHN

>sp|POL_VILV2|GAG-POL polyprotein|Maedi visna virus (strain 1514

Query: 4 LSEEDHN 10
L+EE+HN
Sbjct: 1232 LAEEEHN 1238


>sp|POL_VILVK|GAG-POL polyprotein|Maedi visna virus (strain KV1772)

Query: 4 LSEEDHN 10
L+EE+HN
Sbjct: 1232 LAEEEHN 1238


>sp|POL_VILV1|GAG-POL polyprotein|Maedi visna virus (strain 1514

Query: 4 LSEEDHN 10
L+EE+HN
Sbjct: 1232 LAEEEHN 1238


>sp|POL_VILV|GAG-POL polyprotein|Maedi visna virus (strain 1514)

Query: 4 LSEEDHN 10
L+EE+HN
Sbjct: 1232 LAEEEHN 1238


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 2 CELSEEDH 9
C+L E DH
Sbjct: 326 CKLRETDH 333


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 2 CELSEEDH 9
C+L E DH
Sbjct: 326 CKLRETDH 333


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 2 CELSEEDH 9
C+L E DH
Sbjct: 326 CKLRETDH 333


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 2 CELSEEDH 9
C+L E DH
Sbjct: 326 CKLRETDH 333


>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 CELSEEDHN 10
C +S+ED N
Sbjct: 332 CNISKEDWN 340


>sp|MVP_PPVD|P3N-PIPO polyprotein|Plum pox potyvirus (strain D)

Query: 2 CELSEEDH 9
C+L E DH
Sbjct: 326 CKLRETDH 333


>sp|MVP_PPVSK|P3N-PIPO polyprotein|Plum pox potyvirus (strain SK

Query: 2 CELSEEDH 9
C+L E DH
Sbjct: 326 CKLRETDH 333


>sp|MVP_PPVNA|P3N-PIPO polyprotein|Plum pox potyvirus (isolate NAT)

Query: 2 CELSEEDH 9
C+L E DH
Sbjct: 326 CKLRETDH 333




187|SequenceR|940|931|TLLRCLCELS

>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1 TLLRCLCELS 10
T+ RC+CELS
Sbjct: 938 TMARCVCELS 947


>sp|L_SFTS|RNA-DIRECTED RNA polymerase L|Dabie bandavirus (Severe fever with

Query: 1 TLLRCLCELS 10
T+ RC+CELS
Sbjct: 938 TMARCVCELS 947


>sp|VOLD_BPP2|OLD nuclease|Escherichia phage P2 (Bacteriophage P2)

Query: 1 TLLRCLCELS 10
+LL CLC+ S
Sbjct: 557 SLLDCLCDES 566


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 LLRCLC 7
LLRC+C
Sbjct: 792 LLRCVC 797


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 LLRCLC 7
LLRC+C
Sbjct: 792 LLRCVC 797


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 LLRCLC 7
LLRC+C
Sbjct: 792 LLRCVC 797


>sp|RDRP_AMV|RNA-DIRECTED RNA polymerase 2a|Alfalfa mosaic virus (AMV)

Query: 1 TLLRCL 6
TLLRCL
Sbjct: 3 TLLRCL 8


>sp|HMUDK_BPPM6|5-HMDU DNA kinase|Pseudomonas phage M6

Query: 1 TLLRCL 6
TLLRCL
Sbjct: 16 TLLRCL 21


>sp|TERM_ADES1|PRETERMINAL protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 TLLRCLCE 8
TLLR +CE
Sbjct: 209 TLLRNICE 216


>sp|YL788_MIMIV|PUTATIVE BTB/POZ domain-containing protein L788|Acanthamoeba polyphaga

Query: 1 TLLRCLCE 8
TL+ C+CE
Sbjct: 349 TLIACVCE 356


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 2 LLRCLC 7
+LRC+C
Sbjct: 92 ILRCIC 97


>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69

Query: 1 TLLRCLCEL 9
T+ +CLC L
Sbjct: 275 TIKKCLCTL 283




188|SequenceR|945|936|DKGITTLLRC

>sp|RP132_VACCW|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Western Reserve)

Query: 2 KGITTLLRC 10
KGI T LRC
Sbjct: 1098 KGINTCLRC 1106


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 2 KGITTLLRC 10
KGI T LRC
Sbjct: 1098 KGINTCLRC 1106


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 KGITTLLRC 10
KGI T LRC
Sbjct: 1098 KGINTCLRC 1106


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2 KGITTLLRC 10
KGI T LRC
Sbjct: 1090 KGINTCLRC 1098


>sp|RP132_RABPU|DNA-DIRECTED RNA polymerase 132 kDa|Rabbitpox virus (strain Utrecht) (RPV)

Query: 2 KGITTLLRC 10
KGI T LRC
Sbjct: 1098 KGINTCLRC 1106


>sp|RP132_ECTVM|DNA-DIRECTED RNA polymerase 132 kDa|Ectromelia virus (strain Moscow) (ECTV)

Query: 2 KGITTLLRC 10
KGI T LRC
Sbjct: 1098 KGINTCLRC 1106


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 2 KGITTLLRC 10
KGI T LRC
Sbjct: 1098 KGINTCLRC 1106


>sp|HMUDK_BPPM6|5-HMDU DNA kinase|Pseudomonas phage M6

Query: 3 GITTLLRC 10
G TTLLRC
Sbjct: 13 GKTTLLRC 20


>sp|RDRP_TYYVF|PROTEIN P1-P2|Turnip yellows virus (isolate FL-1)

Query: 1 DKGITTLLR 9
DKG TLLR
Sbjct: 286 DKGDVTLLR 294


>sp|P1_TYYVF|PROTEIN P1|Turnip yellows virus (isolate FL-1)

Query: 1 DKGITTLLR 9
DKG TLLR
Sbjct: 286 DKGDVTLLR 294


>sp|TRX1_HCMVM|TRIPLEX capsid protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 GITTLLRC 10
GIT+LL C
Sbjct: 141 GITSLLTC 148


>sp|TRX1_HCMVA|TRIPLEX capsid protein 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 GITTLLRC 10
GIT+LL C
Sbjct: 141 GITSLLTC 148


>sp|TSP_BPP2|TAIL sheath protein|Escherichia phage P2 (Bacteriophage P2)

Query: 1 DKGITTLLR 9
+ G+TTL+R
Sbjct: 259 ESGVTTLIR 267


>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind

Query: 2 KGITTLLRC 10
KG L+RC
Sbjct: 33 KGFVNLMRC 41




189|SequenceR|950|941|KEFDLDKGIT

>sp|RDRP_DXV96|RNA-DIRECTED RNA polymerase|Drosophila x virus (isolate Chung/1996)

Query: 1 KEFDLDKGI 9
KE+DLDK I
Sbjct: 675 KEYDLDKAI 683


>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus

Query: 1 KEFDLDKG 8
KEFDLD G
Sbjct: 1600 KEFDLDNG 1607


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1 KEFDLDKGI 9
K F++DKGI
Sbjct: 291 KSFEIDKGI 299


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 1 KEFDLDKGIT 10
KE DLD G+T
Sbjct: 454 KEVDLDFGLT 463


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 1 KEFDLDKGIT 10
KE DLD G+T
Sbjct: 456 KEVDLDFGLT 465


>sp|1106L_ASFWA|PROTEIN MGF 110-6L|African swine fever virus (isolate

Query: 3 FDLDKGI 9
+DLDKGI
Sbjct: 85 YDLDKGI 91


>sp|1106L_ASFP4|PROTEIN MGF 110-6L|African swine fever virus (isolate

Query: 3 FDLDKGI 9
+DLDKGI
Sbjct: 85 YDLDKGI 91


>sp|1106L_ASFL5|PROTEIN MGF 110-6L|African swine fever virus (isolate

Query: 3 FDLDKGI 9
+DLDKGI
Sbjct: 85 YDLDKGI 91


>sp|1106L_ASFB7|PROTEIN MGF 110-6L|African swine fever virus (strain

Query: 3 FDLDKGI 9
+DLDKGI
Sbjct: 85 YDLDKGI 91


>sp|SPIKE_BCHK3|SPIKE glycoprotein|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 KEFDLDKGI 9
K F++DKGI
Sbjct: 295 KNFNVDKGI 303


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2 EFDLDKGIT 10
EF+++KG+T
Sbjct: 850 EFEVEKGVT 858


>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)

Query: 1 KEFDLDKGI 9
KEFDLD +
Sbjct: 35 KEFDLDSAL 43


>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)

Query: 1 KEFDLDKGI 9
KEFDLD +
Sbjct: 35 KEFDLDSAL 43


>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)

Query: 1 KEFDLDKGI 9
KEFDLD +
Sbjct: 35 KEFDLDSAL 43


>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann

Query: 1 KEFDLDKGI 9
KEFDLD +
Sbjct: 35 KEFDLDSAL 43


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2 EFDLDKGIT 10
EF+++KG+T
Sbjct: 850 EFEVEKGVT 858


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2 EFDLDKGIT 10
EF+++KG+T
Sbjct: 850 EFEVEKGVT 858


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2 EFDLDKGIT 10
EF+++KG+T
Sbjct: 850 EFEVEKGVT 858


>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)

Query: 1 KEFDLDKGI 9
KEFDLD +
Sbjct: 35 KEFDLDSAL 43


>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann

Query: 1 KEFDLDKGI 9
KEFDLD +
Sbjct: 35 KEFDLDSAL 43


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2 EFDLDKGIT 10
EF+++KG+T
Sbjct: 850 EFEVEKGVT 858


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2 EFDLDKGIT 10
EF+++KG+T
Sbjct: 850 EFEVEKGVT 858


>sp|VP4_ROTPC|OUTER capsid protein VP4|Rotavirus C (strain RVC/Pig/United

Query: 1 KEFDLDK 7
+EFD+DK
Sbjct: 661 REFDIDK 667


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 EFDLDKGIT 10
EF++DK +T
Sbjct: 873 EFEVDKDVT 881


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 EFDLDKGIT 10
EF++DK +T
Sbjct: 873 EFEVDKDVT 881


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 2 EFDLDKGIT 10
EF++DK +T
Sbjct: 873 EFEVDKDVT 881


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 EFDLDKGIT 10
EF++DK +T
Sbjct: 873 EFEVDKDVT 881


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 EFDLDKGIT 10
EF++DK +T
Sbjct: 873 EFEVDKDVT 881


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 2 EFDLDKGIT 10
EF++DK +T
Sbjct: 873 EFEVDKDVT 881




190|SequenceR|955|946|MRPKAKEFDL

>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate

Query: 1 MRPKAKEFDL 10
MRPK +FD+
Sbjct: 493 MRPKLYDFDM 502


>sp|MVP_TOMS1|MOVEMENT protein|Tomato mosaic virus (strain S-1)

Query: 2 RPKAKEFD 9
RPK K FD
Sbjct: 233 RPKPKSFD 240


>sp|MVP_TOML|MOVEMENT protein|Tomato mosaic virus (strain L)

Query: 2 RPKAKEFD 9
RPK K FD
Sbjct: 233 RPKPKSFD 240


>sp|MVP_TOMK2|MOVEMENT protein|Tomato mosaic virus (strain Kazakh

Query: 2 RPKAKEFD 9
RPK K FD
Sbjct: 233 RPKPKSFD 240


>sp|MVP_TOMK1|MOVEMENT protein|Tomato mosaic virus (strain Kazakh

Query: 2 RPKAKEFD 9
RPK K FD
Sbjct: 233 RPKPKSFD 240


>sp|TM189_MIMIV|PROBABLE fatty acid desaturase MIMI_L630|Acanthamoeba polyphaga mimivirus

Query: 1 MRPKAKEFDL 10
++P+AKE++
Sbjct: 177 VKPRAKEYEF 186


>sp|MVP_TOML2|MOVEMENT protein|Tomato mosaic virus (strain LII)

Query: 2 RPKAKEFD 9
RPK K FD
Sbjct: 233 RPKPKSFD 240


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 3 PKAKEFDL 10
PKA+ FD+
Sbjct: 220 PKARTFDI 227




191|SequenceR|960|951|NFYQDMRPKA

>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 2 FYQDMRPKA 10
FYQ +RP+
Sbjct: 779 FYQPIRPRG 787


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 2 FYQDMRPKA 10
FYQ +RP+
Sbjct: 779 FYQPIRPRG 787


>sp|VRPP_LAMBD|HELICASE loader|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 NFYQDMRPKA 10
N YQ+MR A
Sbjct: 159 NLYQNMRANA 168


>sp|VSR_MSTV|SUPPRESSOR of RNA silencing p3|Maize stripe virus (MStV)

Query: 2 FYQDMRPKA 10
+Y D++P+A
Sbjct: 107 YYSDLKPRA 115


>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10

Query: 1 NFYQDMRPKA 10
++YQD+ P A
Sbjct: 322 HYYQDLSPIA 331


>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55

Query: 1 NFYQDMRP 8
+FYQD+ P
Sbjct: 319 HFYQDISP 326


>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44

Query: 1 NFYQDMRP 8
+FYQD+ P
Sbjct: 319 HFYQDISP 326




192|SequenceR|965|956|IKEMQNFYQD

>sp|RDRP_TNVA|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain A)

Query: 1 IKEMQNFYQ 9
I MQNFYQ
Sbjct: 625 IPVMQNFYQ 633


>sp|BP06_BPT4|BASEPLATE wedge protein gp6|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 IKEMQNFYQ 9
++E+QNFY+
Sbjct: 485 VREVQNFYK 493


>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto

Query: 2 KEMQNFYQD 10
KE QN YQ+
Sbjct: 202 KEQQNLYQN 210


>sp|RDRP_PVXCP|RNA replication protein|Potato virus X (strain CP)

Query: 1 IKEMQNFYQD 10
++EM NF+ D
Sbjct: 445 VEEMNNFFDD 454


>sp|Y2_CYLCV|UNCHARACTERIZED protein 2|Cestrum yellow leaf curling virus

Query: 1 IKEMQNFYQD 10
+KEMQ F D
Sbjct: 190 VKEMQTFLND 199


>sp|RDRP_PVXHB|RNA replication protein|Potato virus X (strain HB)

Query: 1 IKEMQNFYQD 10
++EM NF+ D
Sbjct: 445 VEEMNNFFDD 454


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 1 IKEMQNFYQD 10
++EM+NF D
Sbjct: 217 LREMKNFESD 226


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 1 IKEMQNFYQ 9
+KEM FYQ
Sbjct: 1685 LKEMTRFYQ 1693


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 1 IKEMQNFYQ 9
+KEM FYQ
Sbjct: 1685 LKEMTRFYQ 1693


>sp|L_AMPV1|RNA-DIRECTED RNA polymerase L|Avian metapneumovirus (isolate Canada

Query: 1 IKEMQNFYQD 10
+KE++N Y+D
Sbjct: 775 LKEIRNAYKD 784




193|SequenceR|970|961|KKEKIIKEMQ

>sp|MYBE_AVILE|P135GAG-MYB-ETS-TRANSFORMING protein|Avian leukemia virus E26

Query: 1 KKEKIIKEMQ 10
+KEK IKE++
Sbjct: 105 EKEKRIKELE 114


>sp|NS2A_CVMJH|NON-STRUCTURAL protein 2a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 KEKIIKEMQ 10
+EK IKEMQ
Sbjct: 138 EEKEIKEMQ 146




194|SequenceR|975|966|IRSSTKKEKI

>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52

Query: 2 RSSTKKEKI 10
R+STKK+K+
Sbjct: 519 RTSTKKKKV 527


>sp|VG23_SHV21|UNCHARACTERIZED gene 23 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 IRSSTKKEKI 10
+RSSTKK KI
Sbjct: 6 LRSSTKKVKI 15




195|SequenceR|980|971|QLMFRIRSST

***** No hits found ******


196|SequenceR|985|976|LDLVDQLMFR

>sp|P4A_FOWPN|MAJOR core protein 4a precursor|Fowlpox virus (strain NVSL) (FPV)

Query: 1 LDLVDQLMFR 10
LD +DQ +FR
Sbjct: 310 LDYIDQFVFR 319


>sp|YR831_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R831|Acanthamoeba polyphaga

Query: 1 LDLVDQLMFR 10
D DQL+FR
Sbjct: 1205 FDRTDQLIFR 1214


>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)

Query: 1 LDLVDQLMFR 10
LDL DQ M R
Sbjct: 387 LDLTDQTMHR 396


>sp|Y004_OSHVF|UNCHARACTERIZED protein ORF4|Ostreid herpesvirus 1 (isolate France)

Query: 1 LDLVDQLMFR 10
LDL++Q FR
Sbjct: 136 LDLINQQFFR 145


>sp|YLF2_BPN4|UNCHARACTERIZED protein Gp2|Enterobacteria phage N4 (Bacteriophage N4)

Query: 2 DLVDQLM 8
DL+DQLM
Sbjct: 112 DLLDQLM 118


>sp|R1A_LIYV9|REPLICASE polyprotein 1a|Lettuce infectious yellows virus (isolate

Query: 2 DLVDQLM 8
DLVDQL+
Sbjct: 943 DLVDQLL 949


>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 2 DLVDQLM 8
DLVDQL+
Sbjct: 943 DLVDQLL 949




197|SequenceR|990|981|WNSGRLDLVD

>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus

Query: 1 WNSGRLDLVD 10
+N GR+D++D
Sbjct: 137 YNGGRIDMID 146


>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 WNSGRLDLVD 10
+N GR+D++D
Sbjct: 137 YNGGRIDMID 146


>sp|PG085_VACCW|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Western Reserve)

Query: 1 WNSGRLDLVD 10
+N GR+D++D
Sbjct: 137 YNGGRIDMID 146


>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 WNSGRLDLVD 10
+N GR+D++D
Sbjct: 137 YNGGRIDMID 146


>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)

Query: 1 WNSGRLDLVD 10
+N GR+D++D
Sbjct: 137 YNGGRIDMID 146


>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)

Query: 1 WNSGRLDLVD 10
+N GR+D++D
Sbjct: 137 YNGGRIDMID 146


>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)

Query: 1 WNSGRLDLVD 10
+N GR+D++D
Sbjct: 137 YNGGRIDMID 146


>sp|YL344_MIMIV|UNCHARACTERIZED WD repeat-containing protein L344|Acanthamoeba polyphaga mimivirus

Query: 1 WNSGRLDLVD 10
WNS L+L+D
Sbjct: 481 WNSKTLNLID 490


>sp|DPOL_TNAVC|DNA polymerase|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 1 WNSGRLD 7
WNS R D
Sbjct: 316 WNSSRFD 322


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2 NSGRLDLV 9
N+GR DLV
Sbjct: 1207 NAGRYDLV 1214


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 2 NSGRLDLV 9
N+GR DLV
Sbjct: 1210 NAGRYDLV 1217


>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)

Query: 1 WNSGRLDLVD 10
+N GR+D+++
Sbjct: 138 YNGGRIDMLN 147


>sp|YL089_MIMIV|PUTATIVE BTB/POZ domain-containing protein L89|Acanthamoeba polyphaga

Query: 2 NSGRLDLVD 10
NSG +DL D
Sbjct: 298 NSGYIDLFD 306


>sp|RIR1_MIMIV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WNSGRLDLV 9
WNS +DL+
Sbjct: 723 WNSEMVDLI 731


>sp|YR784_MIMIV|PUTATIVE ankyrin repeat protein R784|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 GRLDLVD 10
GRLD++D
Sbjct: 139 GRLDIID 145


>sp|YR875_MIMIV|PUTATIVE ankyrin repeat protein R875|Acanthamoeba polyphaga mimivirus

Query: 3 SGRLDLV 9
SGRLD+V
Sbjct: 88 SGRLDIV 94




198|SequenceR|995|986|GRRPVWNSGR

>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 4 PVWNSGR 10
P+WN GR
Sbjct: 163 PLWNRGR 169


>sp|RDRP_RDVF|RNA-DIRECTED RNA polymerase P1|Rice dwarf virus (isolate Fujian)

Query: 3 RPVWNSG 9
RPVW SG
Sbjct: 179 RPVWLSG 185


>sp|RDRP_RDVA|RNA-DIRECTED RNA polymerase P1|Rice dwarf virus (isolate Akita)

Query: 3 RPVWNSG 9
RPVW SG
Sbjct: 179 RPVWLSG 185


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 2 RRPVWN 7
R PVWN
Sbjct: 5723 RNPVWN 5728


>sp|TOP2_IIV3|DNA topoisomerase 2|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 GRRPVWNSGR 10
G+ VWN G+
Sbjct: 95 GKTSVWNDGQ 104


>sp|VPB_ARV|PROTEIN beta|Adelaide River virus (ARV)

Query: 1 GRRPVWNSGR 10
G R V+N GR
Sbjct: 59 GERTVYNHGR 68


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4 PVWNSG 9
PVWNS
Sbjct: 5838 PVWNSA 5843


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4 PVWNSG 9
PVWNS
Sbjct: 5858 PVWNSA 5863


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4 PVWNSG 9
PVWNS
Sbjct: 5888 PVWNSA 5893


>sp|RNC_FRG3G|PUTATIVE ribonuclease 3|Frog virus 3 (isolate Goorha)

Query: 1 GRRPVWN 7
GRR +WN
Sbjct: 23 GRRDLWN 29


>sp|FIB12_BPB03|PRE-NECK appendage protein|Bacillus phage B103 (Bacteriophage B103)

Query: 1 GRRPVWN 7
G RP WN
Sbjct: 796 GERPEWN 802


>sp|VPP_BPP2|TERMINASE, ATPase subunit|Escherichia phage P2 (Bacteriophage P2)

Query: 1 GRRPVW 6
G RPVW
Sbjct: 407 GSRPVW 412


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 5 VWNSG 9
VWNSG
Sbjct: 2731 VWNSG 2735


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 5 VWNSG 9
VWNSG
Sbjct: 2738 VWNSG 2742


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 5 VWNSG 9
VWNSG
Sbjct: 2731 VWNSG 2735


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 5 VWNSG 9
VWNSG
Sbjct: 2738 VWNSG 2742


>sp|008L_IIV3|UNCHARACTERIZED protein 008L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 GRRPVWNSGR 10
G+ +W+SGR
Sbjct: 206 GQSVMWDSGR 215


>sp|VPB_BP186|LATE control gene B protein|Escherichia phage 186 (Bacteriophage 186)

Query: 1 GRRPVW 6
G+RP+W
Sbjct: 66 GQRPLW 71


>sp|TOP2_MIMIV|DNA topoisomerase 2|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GRRPVWNSG 9
G+ VWN+G
Sbjct: 103 GQISVWNNG 111


>sp|LYSB_BPML5|ENDOLYSIN B|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 GRRPVW 6
G+RP+W
Sbjct: 208 GQRPIW 213


>sp|O22R_FRG3G|PUTATIVE helicase 022R|Frog virus 3 (isolate Goorha)

Query: 2 RRPVWNS 8
R+P WN+
Sbjct: 288 RKPAWNT 294


>sp|POL2_RRVC|RNA2 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 4 PVWNSGR 10
P W SGR
Sbjct: 129 PEWESGR 135




199|SequenceR|1000|991|KPGQDGRRPV

>sp|NCAP_IBVVI|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 1 KPGQDGRRPV 10
KPG+ GR+PV
Sbjct: 78 KPGKSGRKPV 87


>sp|NCAP_IBVV1|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 1 KPGQDGRRPV 10
KPG+ GR+PV
Sbjct: 79 KPGKGGRKPV 88


>sp|NCAP_IBVM|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 1 KPGQDGRRPV 10
KPG+ GR+PV
Sbjct: 78 KPGKGGRKPV 87


>sp|NCAP_IBVBU|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 1 KPGQDGRRPV 10
KPG+ GR+PV
Sbjct: 78 KPGKGGRKPV 87


>sp|NCAP_IBVBC|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 1 KPGQDGRRPV 10
KPG+ GR+PV
Sbjct: 78 KPGKGGRKPV 87


>sp|NCAP_IBVB|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 1 KPGQDGRRPV 10
KPG+ GR+PV
Sbjct: 78 KPGKGGRKPV 87


>sp|NCAP_IBVSA|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 1 KPGQDGRRPV 10
KPG+ GR+PV
Sbjct: 78 KPGKGGRKPV 87


>sp|NCAP_CVTNC|NUCLEOPROTEIN coronavirus (strain NC95) (TCoV)

Query: 1 KPGQDGRRPV 10
KPG+ GR+PV
Sbjct: 78 KPGKGGRKPV 87


>sp|NCAP_IBVH5|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 1 KPGQDGRRPV 10
KPG+ GR+PV
Sbjct: 78 KPGKGGRKPV 87


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 1 KPGQDGRR 8
KPG DG R
Sbjct: 300 KPGVDGER 307


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 1 KPGQDGRR 8
KPG DG R
Sbjct: 300 KPGVDGER 307


>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka

Query: 1 KPGQDGRRPV 10
KPG RPV
Sbjct: 53 KPGMSQTRPV 62


>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 1 KPGQDGRRPV 10
KPG RPV
Sbjct: 53 KPGMSQTRPV 62


>sp|VNS1_BMDNV|PUTATIVE non-structural protein|Bombyx mori densovirus (BmDNV) (Bombyx

Query: 2 PGQDGRRP 9
PG+DG P
Sbjct: 12 PGKDGLNP 19


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1 KPGQDGRRPV 10
KPG+ GR V
Sbjct: 4 KPGKPGRNRV 13


>sp|NCAP_IBVDE|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 1 KPGQDGRRPV 10
KP + GR+PV
Sbjct: 78 KPSKGGRKPV 87


>sp|NCAP_IBVK|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 1 KPGQDGRRPV 10
KP + GR+PV
Sbjct: 78 KPSKGGRKPV 87


>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40

Query: 2 PGQDGRRPV 10
P +DG+ PV
Sbjct: 45 PPEDGKEPV 53


>sp|NCAP_CVTMI|NUCLEOPROTEIN coronavirus (strain Minnesota) (TCoV)

Query: 1 KPGQDGRRPV 10
KP + GR+PV
Sbjct: 78 KPSKGGRKPV 87


>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43

Query: 2 PGQDGRRPV 10
PGQD R V
Sbjct: 165 PGQDNRENV 173


>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7

Query: 2 PGQDGRRPV 10
PGQD R V
Sbjct: 137 PGQDSRENV 145




200|SequenceR|1005|996|IQDITKPGQD

>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)

Query: 1 IQDITKP 7
+QD+TKP
Sbjct: 729 LQDVTKP 735


>sp|YL285_MIMIV|UNCHARACTERIZED protein L285|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 ITKPGQ 9
+TKPGQ
Sbjct: 68 VTKPGQ 73


>sp|VG02_GAHVM|UNCHARACTERIZED gene 2 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 IQDITKPGQD 10
++ T+PGQD
Sbjct: 51 LRTATRPGQD 60


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 4 ITKPGQD 10
ITKPG D
Sbjct: 379 ITKPGPD 385


>sp|CPM_LIYV9|MINOR capsid protein|Lettuce infectious yellows virus (isolate

Query: 3 DITKPGQ 9
DI+KPG+
Sbjct: 250 DISKPGE 256




201|SequenceR|1010|1001|EAEKHIQDIT

>sp|DPOL_HPBDW|PROTEIN P|Duck hepatitis B virus (isolate

Query: 1 EAEKHIQDI 9
EAEKH++++
Sbjct: 17 EAEKHLREL 25


>sp|DPOL_HPBDC|PROTEIN P|Duck hepatitis B virus (strain

Query: 1 EAEKHIQDI 9
EAEKH++++
Sbjct: 17 EAEKHLREL 25


>sp|DPOL_HPBDB|PROTEIN P|Duck hepatitis B virus (isolate

Query: 1 EAEKHIQDI 9
EAEKH++++
Sbjct: 17 EAEKHLREL 25


>sp|DPOL_DHBVQ|PROTEIN P|Duck hepatitis B virus (isolate

Query: 1 EAEKHIQDI 9
EAEKH++++
Sbjct: 17 EAEKHLREL 25




202|SequenceR|1015|1006|RHEEMEAEKH

***** No hits found ******


203|SequenceR|1020|1011|VKIHERHEEM

>sp|POLG_MNV1|GENOME polyprotein|Norovirus (isolate Mouse/NoV/United

Query: 3 IHERHEE 9
+HERH++
Sbjct: 695 VHERHDD 701


>sp|P2_RDVF|MINOR outer capsid protein P2|Rice dwarf virus (isolate Fujian)

Query: 3 IHERHEEM 10
+H RHE M
Sbjct: 192 VHVRHENM 199


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 1 VKIHERHEEM 10
VKI RH +M
Sbjct: 1041 VKIRARHHKM 1050


>sp|YL520_MIMIV|PUTATIVE BTB/POZ domain-containing protein L520|Acanthamoeba polyphaga

Query: 1 VKIHERHE 8
+++HERH+
Sbjct: 688 LQVHERHQ 695


>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978

Query: 1 VKIHERHEE 9
+K+HE +EE
Sbjct: 354 IKVHEGYEE 362


>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 KIHERHEEM 10
K+HE EEM
Sbjct: 135 KVHEPFEEM 143


>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 1 VKIHERHEE 9
+K+HE +EE
Sbjct: 354 IKVHEGYEE 362


>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977

Query: 1 VKIHERHEE 9
+K+HE +EE
Sbjct: 354 IKVHEGYEE 362


>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 KIHERHEEM 10
K+HE EEM
Sbjct: 135 KVHEPFEEM 143


>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4 HERHEEM 10
HERH E+
Sbjct: 182 HERHREL 188


>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 1 VKIHERHEE 9
+K+HE +EE
Sbjct: 354 IKVHEGYEE 362


>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 HERHEEM 10
HERH E+
Sbjct: 182 HERHREL 188


>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978

Query: 1 VKIHERHEE 9
+K+HE +EE
Sbjct: 354 IKVHEGYEE 362


>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978

Query: 1 VKIHERHEE 9
+K+HE +EE
Sbjct: 354 IKVHEGYEE 362


>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 HERHEEM 10
HERH E+
Sbjct: 182 HERHREL 188


>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 1 VKIHERHEE 9
+K+HE +EE
Sbjct: 354 IKVHEGYEE 362




204|SequenceR|1025|1016|AMLQQVKIHE

***** No hits found ******


205|SequenceR|1030|1021|KDSGKAMLQQ

***** No hits found ******


206|SequenceR|1035|1026|PGGRRKDSGK

>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 GGRRKDSG 9
GGR+++SG
Sbjct: 474 GGRKQNSG 481


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 PGGRRKD 7
PGG+RK+
Sbjct: 2055 PGGQRKE 2061


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 3 GRRKDSGK 10
GRRKD K
Sbjct: 26 GRRKDKDK 33




207|SequenceR|1040|1031|IPPGPPGGRR

>sp|LTP_ALHV1|LARGE tegument protein deneddylase|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 PPGPPG 7
PPGPPG
Sbjct: 2447 PPGPPG 2452


>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36

Query: 2 PPGPPGGR 9
PPG PGG+
Sbjct: 202 PPGSPGGQ 209


>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47

Query: 2 PPGPPGGR 9
PPG PGG+
Sbjct: 203 PPGSPGGQ 210


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 2 PPGPPGGR 9
PP PPG R
Sbjct: 2864 PPPPPGTR 2871


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 2 PPGPPGGR 9
PP PPG R
Sbjct: 2862 PPPPPGTR 2869


>sp|YR338_MIMIV|UNCHARACTERIZED protein R338|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PPGPP 6
PPGPP
Sbjct: 262 PPGPP 266


>sp|GH_SUHVK|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Kaplan)

Query: 2 PPGPPGGR 9
PPGPP GR
Sbjct: 205 PPGPPAGR 212


>sp|GH_SUHVN|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain NIA-3)

Query: 2 PPGPPGGR 9
PPGPP GR
Sbjct: 205 PPGPPAGR 212


>sp|GH_SUHVR|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Rice)

Query: 2 PPGPPGGR 9
PPGPP GR
Sbjct: 205 PPGPPAGR 212


>sp|GB_MUHVS|ENVELOPE glycoprotein B|Murid herpesvirus 1 (strain Smith)

Query: 2 PPGPPGGRR 10
PPG PG R
Sbjct: 836 PPGAPGLHR 844


>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5

Query: 2 PPGPPGGR 9
PPG PGG+
Sbjct: 203 PPGSPGGQ 210


>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 2 PPGPP 6
PPGPP
Sbjct: 1967 PPGPP 1971


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 PPGPPGGRR 10
P G PGG R
Sbjct: 6705 PQGNPGGNR 6713


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 PPGPPGGRR 10
P G PGG R
Sbjct: 6701 PQGNPGGNR 6709


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 2 PPGPPGGRR 10
P G PGG R
Sbjct: 6649 PQGNPGGNR 6657


>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19

Query: 2 PPGPPGGRR 10
PP PGG+R
Sbjct: 203 PPDSPGGQR 211


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 IPPGPP 6
IPP PP
Sbjct: 1951 IPPNPP 1956


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 IPPGPP 6
IPP PP
Sbjct: 1951 IPPNPP 1956


>sp|VF268_IIV3|UNCHARACTERIZED protein 074L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 IPPGPPGG 8
+ P PPGG
Sbjct: 770 VTPSPPGG 777


>sp|CPM_GLRV3|MINOR capsid protein|Grapevine leafroll-associated virus 3 (isolate

Query: 2 PPGPPG 7
PP PPG
Sbjct: 31 PPDPPG 36


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 3 PGPPGGRR 10
PG P GRR
Sbjct: 5 PGGPAGRR 12


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 IPPGPP 6
IPP PP
Sbjct: 1951 IPPNPP 1956


>sp|PA_I83A5|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPEGPPCSQR 279


>sp|PA_I80AD|POLYMERASE acidic protein|Influenza A virus (strain A/Gull/Minnesota/945/1980

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPEGPPCSQR 279


>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPEGPPCSQR 279


>sp|PA_I78AC|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPEGPPCSQR 279


>sp|PA_I77AF|POLYMERASE acidic protein|Influenza A virus (strain A/Gull/Maryland/704/1977

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPEGPPCSQR 279


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I80A6|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hokkaido/8/1980

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I79A1|POLYMERASE acidic protein|Influenza A virus (strain A/Pintail/Alberta/119/1979

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I49A1|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Germany/1949

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 266 LPDGPPCSQR 275


>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 263 LPDGPPCSQR 272


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12

Query: 2 PPGPPGGR 9
PPG PG R
Sbjct: 203 PPGSPGQR 210


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 3 PGPPGGRR 10
PG PGG R
Sbjct: 5 PGRPGGNR 12


>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I85A7|POLYMERASE acidic protein|Influenza A virus (strain A/Ruddy

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 1 IPPGPPGG 8
IPP PP G
Sbjct: 68 IPPPPPNG 75


>sp|PA_I34A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fowl

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 263 LPDGPPCSQR 272


>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I80A8|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I66A1|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Wisconsin/1/1966

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I83A4|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Ireland/1378/1983

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I56A1|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Czechoslovakia/1956

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 247 LPDGPPCSQR 256


>sp|PA_I68A3|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Ontario/6118/1968

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 IPPGPP 6
+PP PP
Sbjct: 1951 VPPNPP 1956


>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24

Query: 2 PPGPPGGRR 10
PP PGG R
Sbjct: 203 PPDSPGGSR 211


>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|PA_I56A2|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/England/1/1956

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)

Query: 2 PPGPPG 7
PP PPG
Sbjct: 598 PPAPPG 603


>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New

Query: 1 IPPGPPGGRR 10
+P GPP +R
Sbjct: 270 LPDGPPCSQR 279


>sp|KITH_FHV1|THYMIDINE kinase|Feline herpesvirus 1 (FeHV-1) (Feline

Query: 1 IPPGPPGG 8
+P PPGG
Sbjct: 166 LPREPPGG 173


>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2 PPGPPGGRR 10
P GPPG R
Sbjct: 332 PTGPPGSIR 340


>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 2 PPGPPGGRR 10
P GPPG R
Sbjct: 332 PTGPPGSIR 340


>sp|PEBPH_MIMIV|PHOSPHATIDYLETHANOLAMINE-BINDING protein homolog R644|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PPGPPGG 8
PP PP G
Sbjct: 78 PPSPPKG 84


>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14

Query: 2 PPGPPGGR 9
PP PGG+
Sbjct: 203 PPESPGGQ 210


>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)

Query: 2 PPGPPGGR 9
PPGPP GR
Sbjct: 14 PPGPPIGR 21


>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2 PPGPPGGRR 10
P GPPG R
Sbjct: 332 PTGPPGSIR 340


>sp|GLYCO_DMSVA|GLYCOPROTEIN melanogaster sigma virus (isolate

Query: 2 PPGPPG 7
PP PPG
Sbjct: 294 PPCPPG 299


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 3 PGPPG 7
PGPPG
Sbjct: 612 PGPPG 616


>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)

Query: 2 PPGPPGG 8
P PPGG
Sbjct: 67 PTAPPGG 73


>sp|VE8E2_HPV47|PROTEIN E8^E2C|Human papillomavirus 47

Query: 2 PPGPPGGR 9
PPG PGG+
Sbjct: 12 PPGSPGGQ 19


>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b

Query: 2 PPGPPG 7
PPG PG
Sbjct: 203 PPGSPG 208


>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 1 IPPGPPG 7
+PP PPG
Sbjct: 145 LPPVPPG 151


>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7

Query: 3 PGPPGG 8
PGP GG
Sbjct: 70 PGPSGG 75


>sp|V_PHODV|NON-STRUCTURAL protein V|Phocine distemper virus (PDV)

Query: 1 IPPGPPGGR 9
+P GPP R
Sbjct: 131 VPAGPPSNR 139


>sp|VE8E2_HPV05|PROTEIN E8^E2C|Human papillomavirus 5

Query: 1 IPPGPPGGR 9
PPG PGG+
Sbjct: 11 TPPGSPGGQ 19


>sp|CAPSD_SHVX|CAPSID protein|Shallot virus X (ShVX)

Query: 3 PGPPGGRR 10
P PPGG R
Sbjct: 203 PAPPGGMR 210


>sp|J_SPV4|DNA binding protein ORF8|Spiroplasma virus 4 (SpV4)

Query: 1 IPPGPPGGRR 10
+P P GGRR
Sbjct: 28 MPSNPRGGRR 37


>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1

Query: 4 GPPGGR 9
GPPGG+
Sbjct: 64 GPPGGK 69


>sp|PHOSP_PHODV|PHOSPHOPROTEIN distemper virus (PDV)

Query: 1 IPPGPPGGR 9
+P GPP R
Sbjct: 131 VPAGPPSNR 139


>sp|GLYCO_SIGMA|SPIKE glycoprotein|Sigma virus

Query: 2 PPGPPG 7
PP PPG
Sbjct: 279 PPCPPG 284


>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21

Query: 2 PPGPPGGR 9
PP PGG+
Sbjct: 203 PPDSPGGQ 210


>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20

Query: 2 PPGPPGGR 9
PP PGG+
Sbjct: 203 PPDSPGGQ 210


>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 GPPGGRR 10
GPPGG R
Sbjct: 10 GPPGGWR 16


>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4 GPPGGRR 10
GPPGG R
Sbjct: 10 GPPGGWR 16


>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4 GPPGGRR 10
GPPGG R
Sbjct: 10 GPPGGWR 16


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 PPGPPGGRR 10
P PP G+R
Sbjct: 124 PTAPPSGKR 132


>sp|YR403_MIMIV|UNCHARACTERIZED protein R403|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 PGPPGG 8
PGP GG
Sbjct: 191 PGPTGG 196


>sp|COAT_TRVTC|COAT protein|Tobacco rattle virus (strain TCM)

Query: 5 PPGGR 9
PPGGR
Sbjct: 194 PPGGR 198


>sp|ENV_MLVFP|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 2 PPGPP 6
PPGPP
Sbjct: 101 PPGPP 105


>sp|ENV_MLVFF|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate

Query: 2 PPGPP 6
PPGPP
Sbjct: 101 PPGPP 105


>sp|GH_EHV1B|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain Ab4p)

Query: 2 PPGPPGG 8
PPGP G
Sbjct: 290 PPGPHAG 296


>sp|GH_EHV1|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain HVS25A)

Query: 2 PPGPPGG 8
PPGP G
Sbjct: 290 PPGPHAG 296




208|SequenceR|1045|1036|PLGRSIPPGP

>sp|VE2_BPV3|REGULATORY protein E2|Bovine papillomavirus type 3

Query: 1 PLGRSIPPGP 10
P+ S+PPGP
Sbjct: 198 PVTSSLPPGP 207


>sp|ITP_GAHVM|INNER tegument protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 LGRSIPPGP 10
+GR IPP P
Sbjct: 484 IGRCIPPIP 492


>sp|TOP2_ASFWA|DNA topoisomerase 2|African swine fever virus (isolate

Query: 2 LGRSIPPGP 10
LG+S P GP
Sbjct: 452 LGKSNPSGP 460


>sp|TOP2_ASFP4|DNA topoisomerase 2|African swine fever virus (isolate

Query: 2 LGRSIPPGP 10
LG+S P GP
Sbjct: 452 LGKSNPSGP 460


>sp|TOP2_ASFM2|DNA topoisomerase 2|African swine fever virus (isolate

Query: 2 LGRSIPPGP 10
LG+S P GP
Sbjct: 451 LGKSNPSGP 459


>sp|TOP2_ASFK5|DNA topoisomerase 2|African swine fever virus (isolate

Query: 2 LGRSIPPGP 10
LG+S P GP
Sbjct: 452 LGKSNPSGP 460


>sp|TOP2_ASFB7|DNA topoisomerase 2|African swine fever virus (strain

Query: 2 LGRSIPPGP 10
LG+S P GP
Sbjct: 452 LGKSNPSGP 460


>sp|UL79_EHV2|GENE 18 protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 LGRSIPP 8
LGR +PP
Sbjct: 72 LGRKVPP 78


>sp|YR707_MIMIV|UNCHARACTERIZED protein R707|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PLGRSIPP 8
P G+ IPP
Sbjct: 129 PYGQKIPP 136


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 1 PLGRSIPPGP 10
P+ R++P GP
Sbjct: 1152 PVVRAVPEGP 1161


>sp|BP44_BPMU|BASEPLATE hub protein gp44|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 LGRSIPPG 9
LG ++PPG
Sbjct: 35 LGVNVPPG 42


>sp|MYC_AVIMH|VIRAL myc transforming protein|Avian retrovirus MH2

Query: 1 PLGRSIPPG 9
PLGR PPG
Sbjct: 198 PLGRRGPPG 206


>sp|VP6_ROTBB|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Cow/United

Query: 1 PLGRSIPPG 9
P+G PPG
Sbjct: 356 PIGPVFPPG 364


>sp|VG39_ICHVA|UNCHARACTERIZED protein ORF39|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 LGRSIPPG 9
G+++PPG
Sbjct: 310 FGKTVPPG 317


>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P

Query: 4 RSIPPG 9
RS+PPG
Sbjct: 32 RSVPPG 37


>sp|MYC_AVIME|VIRAL myc transforming protein|Avian retrovirus MH2E21

Query: 1 PLGRSIPPG 9
PLGR PPG
Sbjct: 198 PLGRRGPPG 206


>sp|FII_LAMBD|HEAD-TAIL connector protein FII|Escherichia phage lambda (Bacteriophage

Query: 2 LGRSIPPG 9
LGR +PP
Sbjct: 105 LGRGVPPA 112


>sp|ENV_SMRVH|ENVELOPE glycoprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 1 PLGRSIPPGP 10
PL RS P GP
Sbjct: 212 PLARSKPRGP 221




209|SequenceR|1050|1041|GDDVLPLGRS

>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 GDDVLPL 7
GDD+LPL
Sbjct: 3849 GDDLLPL 3855


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 2 DDVLPLGRS 10
DDVL LGR+
Sbjct: 1808 DDVLRLGRA 1816


>sp|YL152_MIMIV|UNCHARACTERIZED protein L152|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GDDVLP 6
GDDV+P
Sbjct: 136 GDDVMP 141


>sp|RP147_FOWPN|DNA-DIRECTED RNA polymerase 147 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 3 DVLPLGRS 10
D++PL RS
Sbjct: 618 DIIPLSRS 625




210|SequenceR|1055|1046|VTNWGGDDVL

>sp|POL2_TOTV|RNA2 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 VTNWGGDDVL 10
+TNW G ++L
Sbjct: 858 ITNWNGKNLL 867


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 TNWGGDDVL 10
+ WGGD +L
Sbjct: 3054 SQWGGDPIL 3062


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 TNWGGDDVL 10
+ WGGD +L
Sbjct: 3054 SQWGGDPIL 3062


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 2 TNWGGDDVL 10
+ WGGD +L
Sbjct: 3054 SQWGGDPIL 3062


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 2 TNWGGDDVL 10
+ WGGD +L
Sbjct: 3054 SQWGGDPIL 3062


>sp|ENV_SIVGB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate GB1)

Query: 1 VTNWGGDDV 9
VTN+ GDDV
Sbjct: 203 VTNFRGDDV 211


>sp|Y67_BPT3|UNCHARACTERIZED gene 6.7 protein|Enterobacteria phage T3 (Bacteriophage T3)

Query: 4 WGGDD 8
WGGDD
Sbjct: 34 WGGDD 38


>sp|FIBER_BPK1E|TAIL spike protein|Escherichia phage K1E (Bacteriophage K1E)

Query: 1 VTNWGGDDV 9
V NW DD+
Sbjct: 465 VNNWNADDI 473


>sp|PG200_VACCW|PROTEIN OPG200|Vaccinia virus (strain Western Reserve)

Query: 2 TNWGGDD 8
T WGG+D
Sbjct: 113 TYWGGED 119


>sp|PG200_VARV|PROTEIN OPG200|Variola virus

Query: 2 TNWGGDD 8
T WGG+D
Sbjct: 113 TYWGGED 119


>sp|PG200_VAR67|PROTEIN OPG200|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 TNWGGDD 8
T WGG+D
Sbjct: 113 TYWGGED 119


>sp|PG200_VACCC|PROTEIN OPG200|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 TNWGGDD 8
T WGG+D
Sbjct: 113 TYWGGED 119


>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 TNWGGDDV 9
+ WGG DV
Sbjct: 385 SGWGGPDV 392


>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 TNWGGDDV 9
+ WGG DV
Sbjct: 385 SGWGGPDV 392


>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 TNWGGDDV 9
+ WGG DV
Sbjct: 385 SGWGGPDV 392


>sp|PG200_MONPV|PROTEIN OPG200|Monkeypox virus (MPXV)

Query: 2 TNWGGDD 8
T WGG+D
Sbjct: 113 TYWGGED 119


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4 WGGDDVL 10
WGGD L
Sbjct: 472 WGGDKTL 478


>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)

Query: 4 WGGDDVL 10
WG DD L
Sbjct: 499 WGHDDTL 505


>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5

Query: 2 TNWGGD 7
++WGGD
Sbjct: 117 SHWGGD 122


>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2

Query: 2 TNWGGD 7
++WGGD
Sbjct: 117 SHWGGD 122


>sp|POLG_CYVV|GENOME polyprotein|Clover yellow vein virus

Query: 1 VTNWGGDDVL 10
+ WG DD+L
Sbjct: 40 IEAWGYDDLL 49


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4 WGGDDVL 10
WGGD+ L
Sbjct: 464 WGGDNPL 470


>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)

Query: 4 WGGDDV 9
WGG D+
Sbjct: 508 WGGTDI 513


>sp|VF224_IIV3|PROBABLE cysteine proteinase 024R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 TNWGGDD 8
+ WGGDD
Sbjct: 359 STWGGDD 365


>sp|PHOSP_RINDR|PHOSPHOPROTEIN virus (strain RBOK) (RDV)

Query: 1 VTNWGGDD 8
V WGGD+
Sbjct: 139 VEVWGGDE 146


>sp|FIBER_BPK1F|TAIL spike protein|Escherichia phage K1F (Bacteriophage K1F)

Query: 1 VTNWGGDDV 9
V NW DD+
Sbjct: 675 VNNWNADDI 683


>sp|YR481_MIMIV|UNCHARACTERIZED protein R481|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VTNWGGDDVL 10
+ WG D+++
Sbjct: 667 IVKWGNDNIM 676


>sp|PHOSP_RINDK|PHOSPHOPROTEIN virus (strain Kabete O)

Query: 4 WGGDD 8
WGGD+
Sbjct: 142 WGGDE 146


>sp|Y013_NPVAC|UNCHARACTERIZED 38.7 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 3 NWGGDDV 9
NW GD V
Sbjct: 91 NWDGDQV 97




211|SequenceR|1060|1051|GKSIPVTNWG

>sp|RDRP_BBMV|RNA-DIRECTED RNA polymerase 2a|Broad bean mottle virus

Query: 1 GKSIPVTNW 9
G +P+TNW
Sbjct: 500 GFPVPLTNW 508


>sp|RIR1_ALHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 SIPVTNW 9
SIP+T W
Sbjct: 567 SIPITEW 573


>sp|Y06K_BPT4|UNCHARACTERIZED 25.0 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 GKSIPVTNWG 10
GKSI VTN+
Sbjct: 95 GKSIAVTNFA 104


>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 1 GKSIPVTNW 9
GK +PV W
Sbjct: 1038 GKEVPVGGW 1046


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 GKSIPVTNW 9
GK +PV W
Sbjct: 1038 GKEVPVGGW 1046


>sp|VG65_ICHVA|UNCHARACTERIZED protein ORF65|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 GKSIPVTNWG 10
GK+ PVT +G
Sbjct: 324 GKTAPVTTFG 333


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 3 SIPVTNWG 10
S+PVTN G
Sbjct: 811 SVPVTNSG 818


>sp|MATA2_BPSP|MATURATION protein A2|Enterobacteria phage SP (Bacteriophage SP)

Query: 1 GKSIPVTNW 9
G+ +PV +W
Sbjct: 317 GRLVPVKDW 325


>sp|RDRP_CCMV|RNA-DIRECTED RNA polymerase 2a|Cowpea chlorotic mottle virus (CCMV)

Query: 1 GKSIPVTNW 9
G P+TNW
Sbjct: 500 GFPAPLTNW 508


>sp|RDRP_BMV|RNA-DIRECTED RNA polymerase 2a|Brome mosaic virus (BMV)

Query: 1 GKSIPVTNW 9
G P+TNW
Sbjct: 489 GFPAPLTNW 497


>sp|CAPSH_ADEM1|HEXON protein|Murine adenovirus A serotype 1

Query: 3 SIPVTNWG 10
SIP NW
Sbjct: 622 SIPARNWA 629


>sp|CAPSH_ADECR|HEXON protein|Canine adenovirus serotype 1 (strain

Query: 3 SIPVTNWG 10
SIP NW
Sbjct: 618 SIPARNWA 625


>sp|CAPSH_ADECC|HEXON protein|Canine adenovirus serotype 1 (strain

Query: 3 SIPVTNWG 10
SIP NW
Sbjct: 618 SIPARNWA 625


>sp|Y208_AFV2P|UNCHARACTERIZED protein ORF208|Acidianus filamentous virus 2 (isolate

Query: 4 IPVTNWG 10
IP NWG
Sbjct: 100 IPAVNWG 106


>sp|SPIKE_ADEM1|FIBER protein|Murine adenovirus A serotype 1

Query: 5 PVTNWG 10
PVT WG
Sbjct: 455 PVTYWG 460




212|SequenceR|1065|1056|DIPRSGKSIP

>sp|DNBI_TUHV2|MAJOR DNA-binding protein|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 2 IPRSGKSIP 10
IPR GK +P
Sbjct: 777 IPRGGKGLP 785


>sp|EXO_LAMBD|EXONUCLEASE phage lambda (Bacteriophage lambda)

Query: 3 PRSGKSIP 10
PRSGK P
Sbjct: 44 PRSGKKWP 51


>sp|RECR_BPP1|RECOMBINASE cre|Escherichia phage P1 (Bacteriophage P1)

Query: 1 DIPRSGKSIP 10
D+ R+G SIP
Sbjct: 298 DMARAGVSIP 307


>sp|MOTB_BPT4|TRANSCRIPTION regulatory protein motB|Enterobacteria phage T4 (Bacteriophage

Query: 2 IPRSGKSIP 10
IP+ GKS P
Sbjct: 47 IPKDGKSKP 55


>sp|G1P_BPPHL|GENE 1 protein|Xanthomonas phage phiLf (Bacteriophage phi-Lf)

Query: 2 IPRSGKS 8
+PR+GKS
Sbjct: 8 VPRAGKS 14


>sp|VG15_BPPH8|REPLICATION protein 15|Enterobacteria phage phi80 (Bacteriophage phi-80)

Query: 3 PRSGKSIP 10
P++GKS P
Sbjct: 130 PKTGKSFP 137


>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69

Query: 1 DIPRSGKSI 9
DIP+SG+++
Sbjct: 169 DIPQSGEAL 177


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1372 EIPFYGKAIP 1381


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1372 EIPFYGKAIP 1381


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1372 EIPFYGKAIP 1381


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1372 EIPFYGKAIP 1381


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1372 EIPFYGKAIP 1381


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1 DIPRSGKSI 9
D+PR G+++
Sbjct: 156 DVPRGGRAV 164


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1 DIPRSGKSI 9
D+PR G+++
Sbjct: 156 DVPRGGRAV 164


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1372 EIPFYGKAIP 1381


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1372 EIPFYGKAIP 1381


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1372 EIPFYGKAIP 1381


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1372 EIPFYGKAIP 1381


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1372 EIPFYGKAIP 1381


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1377 EIPFYGKAIP 1386


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1378 EIPFYGKAIP 1387


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1372 EIPFYGKAIP 1381


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1376 EIPFYGKAIP 1385


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1376 EIPFYGKAIP 1385


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1376 EIPFYGKAIP 1385


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1376 EIPFYGKAIP 1385


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1378 EIPFYGKAIP 1387


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1 DIPRSGKSIP 10
+IP GK+IP
Sbjct: 1372 EIPFYGKAIP 1381




213|SequenceR|1070|1061|TLRSTDIPRS

>sp|CAPSD_ABMVW|CAPSID protein|Abutilon mosaic virus (isolate West

Query: 1 TLRSTDIPR 9
TLR+ D+PR
Sbjct: 53 TLRTADVPR 61


>sp|CAPSD_PYMVV|CAPSID protein|Potato yellow mosaic virus (isolate

Query: 1 TLRSTDIPR 9
TLR+ D+PR
Sbjct: 53 TLRTPDVPR 61


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 2 LRSTDIPR 9
L STD+PR
Sbjct: 3962 LTSTDLPR 3969


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 2 LRSTDIPR 9
L STD+PR
Sbjct: 4087 LTSTDLPR 4094


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 LRSTDIPR 9
L STD+PR
Sbjct: 3962 LTSTDLPR 3969


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 2 LRSTDIPR 9
L STD+PR
Sbjct: 4087 LTSTDLPR 4094


>sp|HELI_PSHV1|DNA replication helicase|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 LRSTDIPR 9
LR TD+PR
Sbjct: 729 LRETDMPR 736


>sp|CAPSD_TMOV|CAPSID protein|Tomato mottle virus (isolate Florida)

Query: 1 TLRSTDIPR 9
TLR+TD+ R
Sbjct: 53 TLRTTDVAR 61




214|SequenceR|1075|1066|PKTIKTLRST

>sp|VG55_BPMD2|GENE 55 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 PKTIKTLRS 9
PK +KT+RS
Sbjct: 102 PKDVKTVRS 110


>sp|YL076_MIMIV|PUTATIVE BTB/POZ domain-containing protein L76|Acanthamoeba polyphaga

Query: 2 KTIKTLRST 10
KTI+T++ST
Sbjct: 456 KTIRTIKST 464


>sp|DPOL2_BPKIM|DEPOLYMERASE 1, capsule K47-specific|Klebsiella phage vB_KpnP_IME205

Query: 2 KTIKTLRS 9
KT+KT+RS
Sbjct: 99 KTVKTVRS 106




215|SequenceR|1080|1071|SDISGPKTIK

>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3 ISGPKTIK 10
I GP+TIK
Sbjct: 3534 IGGPRTIK 3541


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 ISGPKTIK 10
I GP+TIK
Sbjct: 3534 IGGPRTIK 3541


>sp|KFMS_FSVMD|TYROSINE-PROTEIN kinase transforming protein fms|Feline sarcoma virus (strain

Query: 2 DISGPKTI 9
DISGP T+
Sbjct: 232 DISGPATL 239


>sp|NCAP_RINDR|NUCLEOPROTEIN virus (strain RBOK) (RDV)

Query: 2 DISGPK 7
DISGPK
Sbjct: 63 DISGPK 68


>sp|NCAP_RINDU|NUCLEOPROTEIN virus (strain Kuwait 82/1)

Query: 2 DISGPK 7
DISGPK
Sbjct: 63 DISGPK 68


>sp|NCAP_RINDL|NUCLEOPROTEIN virus (strain L) (RDV)

Query: 2 DISGPK 7
DISGPK
Sbjct: 63 DISGPK 68


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 3 ISGPKT 8
ISGPKT
Sbjct: 2050 ISGPKT 2055




216|SequenceR|1085|1076|FLQNNSDISG

>sp|V243_FOWPN|PUTATIVE ankyrin repeat protein FPV243|Fowlpox virus (strain NVSL) (FPV)

Query: 1 FLQNNSDIS 9
FL+NN+DI+
Sbjct: 45 FLENNADIN 53


>sp|GB_PSHV1|ENVELOPE glycoprotein B|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 NNSDISG 10
NNSD+ G
Sbjct: 594 NNSDVGG 600


>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 FLQNNSDISG 10
F+ NN+ +SG
Sbjct: 116 FVNNNTQLSG 125


>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)

Query: 1 FLQNNSDISG 10
F+ NN+ +SG
Sbjct: 116 FVNNNTQLSG 125




217|SequenceR|1090|1081|RGGPAFLQNN

>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 3 GPAFLQNN 10
GPA L NN
Sbjct: 1900 GPAALSNN 1907




218|SequenceR|1095|1086|KGWSLRGGPA

>sp|FIBER_LAMBD|TAIL fiber protein|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 KGWSLRGGPA 10
+GW+++G PA
Sbjct: 576 RGWTIKGKPA 585


>sp|SPIKE_IBVB|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 GWSLRGG 8
GW L+GG
Sbjct: 39 GWHLQGG 45


>sp|172L_IIV6|PUTATIVE helicase 172L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 KGWSLRGG 8
K W +RGG
Sbjct: 61 KTWGVRGG 68


>sp|GAG_EIAVY|GAG polyprotein|Equine infectious anemia virus (strain

Query: 1 KGWSLRGGP 9
KG +L+GGP
Sbjct: 368 KGGALKGGP 376


>sp|GAG_EIAVC|GAG polyprotein|Equine infectious anemia virus (isolate

Query: 1 KGWSLRGGP 9
KG +L+GGP
Sbjct: 368 KGGALKGGP 376


>sp|GAG_EIAV9|GAG polyprotein|Equine infectious anemia virus (isolate

Query: 1 KGWSLRGGP 9
KG +L+GGP
Sbjct: 368 KGGALKGGP 376


>sp|POLR_NORAV|REPLICATION polyprotein|Nora virus

Query: 3 WSLRGGP 9
WSL G P
Sbjct: 1710 WSLSGSP 1716


>sp|TERM_ADECR|PRETERMINAL protein|Canine adenovirus serotype 1 (strain

Query: 1 KGWSLR 6
+GWSLR
Sbjct: 18 EGWSLR 23


>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka

Query: 2 GWSLRGGP 9
GW L GP
Sbjct: 17 GWGLHRGP 24


>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)

Query: 2 GWSLRGGP 9
GW L GP
Sbjct: 17 GWGLHRGP 24


>sp|L_AMPV1|RNA-DIRECTED RNA polymerase L|Avian metapneumovirus (isolate Canada

Query: 2 GWSLRGG 8
GW RGG
Sbjct: 1467 GWGSRGG 1473


>sp|SPIKE_IBVU2|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 GWSLRGG 8
GW L GG
Sbjct: 21 GWHLHGG 27


>sp|SPIKE_IBVU1|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 GWSLRGG 8
GW L GG
Sbjct: 21 GWHLHGG 27


>sp|SPIKE_IBVM|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 GWSLRGG 8
GW L GG
Sbjct: 39 GWHLHGG 45


>sp|SPIKE_IBVK|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 GWSLRGG 8
GW L GG
Sbjct: 39 GWHLHGG 45


>sp|SPIKE_IBVD3|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 GWSLRGG 8
GW L GG
Sbjct: 39 GWHLHGG 45


>sp|SPIKE_IBVD2|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 GWSLRGG 8
GW L GG
Sbjct: 39 GWHLHGG 45


>sp|SPIKE_IBV6|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 GWSLRGG 8
GW L GG
Sbjct: 39 GWHLHGG 45


>sp|GD_SUHVR|ENVELOPE glycoprotein D|Suid herpesvirus 1 (strain Rice)

Query: 1 KGWSLRGGPA 10
KG+ L GGPA
Sbjct: 382 KGYRLLGGPA 391


>sp|SPIKE_IBVU3|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 2 GWSLRGG 8
GW L GG
Sbjct: 21 GWHLHGG 27


>sp|G9P_BPM13|TAIL virion protein G9P|Enterobacteria phage M13 (Bacteriophage M13)

Query: 2 GWSLRGG 8
GW LR G
Sbjct: 14 GWCLRSG 20


>sp|G9P_BPFD|TAIL virion protein G9P|Enterobacteria phage fd (Bacteriophage fd)

Query: 2 GWSLRGG 8
GW LR G
Sbjct: 14 GWCLRSG 20


>sp|G9P_BPF1|TAIL virion protein G9P|Enterobacteria phage f1 (Bacteriophage f1)

Query: 2 GWSLRGG 8
GW LR G
Sbjct: 14 GWCLRSG 20


>sp|CAPSD_TASV2|CAPSID polyprotein VP90|Turkey astrovirus 2 (TAstV-2)

Query: 2 GWSLRGG 8
GW L+GG
Sbjct: 346 GWLLKGG 352




219|SequenceR|1100|1091|GGSSGKGWSL

>sp|TOP2_MIMIV|DNA topoisomerase 2|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 SSGKGWSL 10
+ GKGWS+
Sbjct: 589 NDGKGWSI 596


>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate

Query: 1 GGSSGKGW 8
G+SGK W
Sbjct: 1692 AGASGKSW 1699


>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate

Query: 1 GGSSGKGWSL 10
GGS G+G S
Sbjct: 716 GGSKGRGASF 725


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 GSSGKGWSL 10
G + KGWSL
Sbjct: 1021 GYTSKGWSL 1029


>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)

Query: 1 GGSSGKGW 8
GG GK W
Sbjct: 936 GGRKGKTW 943


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 2 GSSGKGW 8
G+SGK W
Sbjct: 2508 GTSGKRW 2514


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3232 SQGAGWSL 3239


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3232 SQGAGWSL 3239


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3232 SQGAGWSL 3239


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3232 SQGAGWSL 3239


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3232 SQGAGWSL 3239


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3229 SQGAGWSL 3236


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3229 SQGAGWSL 3236


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3232 SQGAGWSL 3239


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3229 SQGAGWSL 3236


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3229 SQGAGWSL 3236


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3229 SQGAGWSL 3236


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3229 SQGAGWSL 3236


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3231 SQGAGWSL 3238


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3231 SQGAGWSL 3238


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3231 SQGAGWSL 3238


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3231 SQGAGWSL 3238


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3231 SQGAGWSL 3238


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3232 SQGAGWSL 3239


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3233 SQGAGWSL 3240


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3233 SQGAGWSL 3240


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3266 SPGSGWSL 3273


>sp|NCAP_SENDZ|NUCLEOPROTEIN virus (strain Z) (SeV)

Query: 1 GGSSGKGWS 9
GG SG+ W+
Sbjct: 442 GGDSGERWA 450


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 3 SSGKGWSL 10
S G GWSL
Sbjct: 3264 SPGSGWSL 3271


>sp|NCAP_SENDE|NUCLEOPROTEIN virus (strain Enders) (SeV)

Query: 1 GGSSGKGWS 9
GG SG+ W+
Sbjct: 442 GGESGERWA 450




220|SequenceR|1105|1096|PKAGSGGSSG

***** No hits found ******


221|SequenceR|1110|1101|SAADSPKAGS

***** No hits found ******


222|SequenceR|1115|1106|PRAAESAADS

>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 1 PRAAESAADS 10
PRA ++AADS
Sbjct: 2164 PRAFQNAADS 2173




223|SequenceR|1120|1111|LTSTAPRAAE

>sp|RDRP_PVXHB|RNA replication protein|Potato virus X (strain HB)

Query: 2 TSTAPRAAE 10
TSTAPR E
Sbjct: 486 TSTAPREPE 494


>sp|RDRP_PVXCP|RNA replication protein|Potato virus X (strain CP)

Query: 2 TSTAPRAAE 10
TSTAPR E
Sbjct: 486 TSTAPREPE 494




224|SequenceR|1125|1116|ASFRNLTSTA

***** No hits found ******


225|SequenceR|1130|1121|VAQQLASFRN

***** No hits found ******


226|SequenceR|1135|1126|TSETPVAQQL

>sp|VP3_EHDV1|CORE protein VP3|Epizootic hemorrhagic disease virus 1

Query: 1 TSETPVAQQL 10
T TP AQQL
Sbjct: 326 TGSTPTAQQL 335


>sp|VP3_BTV17|CORE protein VP3|Bluetongue virus 17 (isolate USA)

Query: 1 TSETPVAQQL 10
T TP AQQL
Sbjct: 328 TGSTPTAQQL 337


>sp|VP3_BTV1S|CORE protein VP3|Bluetongue virus 1 (isolate South

Query: 1 TSETPVAQQL 10
T TP AQQL
Sbjct: 328 TGSTPTAQQL 337


>sp|VP3_BTV11|CORE protein VP3|Bluetongue virus 11 (isolate USA)

Query: 1 TSETPVAQQL 10
T TP AQQL
Sbjct: 328 TGSTPTAQQL 337


>sp|CAPSD_BTV13|INNER capsid protein VP3|Bluetongue virus 13 (isolate USA)

Query: 1 TSETPVAQQL 10
T TP AQQL
Sbjct: 328 TGSTPTAQQL 337


>sp|VP3_EHDVA|CORE protein VP3|Epizootic hemorrhagic disease virus 2

Query: 1 TSETPVAQQL 10
T TP AQQL
Sbjct: 326 TGSTPTAQQL 335


>sp|VP3_BTV10|CORE protein VP3|Bluetongue virus 10 (isolate USA)

Query: 1 TSETPVAQQL 10
T TP AQQL
Sbjct: 328 TGSTPTAQQL 337


>sp|VP3_BTV2A|CORE protein VP3|Bluetongue virus 2 (isolate USA)

Query: 1 TSETPVAQQL 10
T TP AQQL
Sbjct: 328 TGSTPTAQQL 337


>sp|VP3_BTV1A|CORE protein VP3|Bluetongue virus 1 (isolate Australia)

Query: 1 TSETPVAQQL 10
T TP AQQL
Sbjct: 328 TGSTPTAQQL 337


>sp|SF33K_ADE41|PROTEIN 33K|Human adenovirus F serotype 41

Query: 3 ETPVAQQL 10
+TPVAQ+L
Sbjct: 144 DTPVAQEL 151


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SETPVAQQL 10
SE+P+ QQ+
Sbjct: 1099 SESPIVQQI 1107




227|SequenceR|1140|1131|VRRNDTSETP

>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 1 VRRNDTSETP 10
V R+D +ETP
Sbjct: 949 VERDDRAETP 958


>sp|FP_NPVLD|FP protein|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 2 RRNDTSE 8
RRND+SE
Sbjct: 166 RRNDSSE 172




228|SequenceR|1145|1136|SSRQVVRRND

***** No hits found ******


229|SequenceR|1150|1141|RERSLSSRQV

>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 RERSLSSRQ 9
RERSL SR+
Sbjct: 1861 RERSLLSRE 1869


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 RERSLSSRQ 9
RERSL SR+
Sbjct: 1861 RERSLLSRE 1869




230|SequenceR|1155|1146|GAKEGRERSL

>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 GAKEGRERS 9
GA+EGR RS
Sbjct: 1259 GAQEGRYRS 1267


>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 GAKEGRERSL 10
GAK RER L
Sbjct: 12 GAKRSRERDL 21


>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GAKEGRERSL 10
GAK RER L
Sbjct: 12 GAKRSRERDL 21




231|SequenceR|1160|1151|RDGRDGAKEG

>sp|DUT_MUHVS|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Murid herpesvirus 1 (strain

Query: 1 RDGRDGAKEG 10
R GRD + EG
Sbjct: 373 RSGRDSSNEG 382


>sp|CAPSD_BPAL3|CAPSID protein F|Escherichia phage alpha3 (Bacteriophage alpha-3)

Query: 1 RDGRDGAK 8
RDGR G K
Sbjct: 336 RDGRSGIK 343


>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4 RDGAKE 9
RDGAKE
Sbjct: 444 RDGAKE 449




232|SequenceR|1165|1156|ESRELRDGRD

>sp|YR403_MIMIV|UNCHARACTERIZED protein R403|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SRELRDGRD 10
SR+ RD RD
Sbjct: 81 SRDSRDSRD 89


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 ESRELRDGRD 10
+SR R+GRD
Sbjct: 2090 DSRMFREGRD 2099




233|SequenceR|1170|1161|RDGGRESREL

>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 RDGGRESREL 10
R GGRE R+L
Sbjct: 612 RYGGREFRDL 621


>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RDGGRES 7
RDGG ES
Sbjct: 433 RDGGNES 439




234|SequenceR|1175|1166|DLRDGRDGGR

>sp|VG87_GAHVM|UNCHARACTERIZED gene 87 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 DLRDGRDG 8
D RDG+DG
Sbjct: 27 DGRDGKDG 34


>sp|RIR1_MUHVS|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Murid herpesvirus 1 (strain

Query: 2 LRDGRDGGR 10
R GRD GR
Sbjct: 367 FRAGRDSGR 375




235|SequenceR|1180|1171|PTRARDLRDG

>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)

Query: 2 TRARDLRDG 10
TR+ D RDG
Sbjct: 194 TRSADFRDG 202


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 1 PTRARDLRD 9
PT ARD RD
Sbjct: 2507 PTAARDPRD 2515


>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)

Query: 2 TRARDLRDG 10
TR+ D RDG
Sbjct: 199 TRSADFRDG 207




236|SequenceR|1185|1176|SRKTAPTRAR

***** No hits found ******


237|SequenceR|1190|1181|VEKSFSRKTA

***** No hits found ******


238|SequenceR|1195|1186|RSREEVEKSF

>sp|YL357_MIMIV|UNCHARACTERIZED protein L357|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RSREEVEKSF 10
RSREE+EK +
Sbjct: 59 RSREEIEKLY 68


>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 1 RSREEVEK 8
RSRE+VEK
Sbjct: 1890 RSREKVEK 1897


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 1 RSREEVEK 8
RSRE+VEK
Sbjct: 1896 RSREKVEK 1903


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 RSREEVEKSF 10
RS+EE++K F
Sbjct: 1265 RSKEELKKCF 1274


>sp|5054R_ASFM2|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 2 SREEVEK 8
SREE+EK
Sbjct: 285 SREEIEK 291




239|SequenceR|1200|1191|QSPRERSREE

>sp|IBMP_CERV|TRANSACTIVATOR/VIROPLASMIN protein|Carnation etched ring virus (CERV)

Query: 2 SPRERSREE 10
SP+ER++E+
Sbjct: 424 SPKERTKED 432




240|SequenceR|1205|1196|RLGEPQSPRE

>sp|DPOL_OSHVF|DNA polymerase|Ostreid herpesvirus 1 (isolate France)

Query: 2 LGEPQSPRE 10
+G+PQ P+E
Sbjct: 87 VGDPQGPKE 95


>sp|VF295_IIV3|UNCHARACTERIZED protein 016R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 RLGEPQSP 8
RLG+PQ P
Sbjct: 62 RLGQPQVP 69


>sp|ORF1_SPV1R|UNCHARACTERIZED protein ORF1|Spiroplasma virus SpV1-R8A2 B (SpV1)

Query: 3 GEPQSP 8
GEPQ+P
Sbjct: 249 GEPQTP 254


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 1 RLGEPQSP 8
R+G PQ+P
Sbjct: 709 RVGSPQNP 716


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 2 LGEPQSPRE 10
+G+PQ+P E
Sbjct: 1027 VGKPQTPAE 1035


>sp|SCAF_EHV2|CAPSID scaffolding protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 LGEPQSPR 9
+GEPQ+P+
Sbjct: 551 VGEPQAPQ 558




241|SequenceR|1210|1201|LSAAKRLGEP

>sp|INTG_BPPF1|PUTATIVE integrase|Pseudomonas phage Pf1 (Bacteriophage Pf1)

Query: 4 AKRLGEP 10
AKRLG P
Sbjct: 86 AKRLGNP 92




242|SequenceR|1215|1206|DRDETLSAAK

>sp|V155_FOWPN|PUTATIVE ankyrin repeat protein FPV115|Fowlpox virus (strain NVSL) (FPV)

Query: 1 DRDETLS 7
D+DETLS
Sbjct: 465 DKDETLS 471




243|SequenceR|1220|1211|ADRGRDRDET

>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 DRGRDR 7
DRGRDR
Sbjct: 1068 DRGRDR 1073


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 DRGRDR 7
DRGRDR
Sbjct: 1069 DRGRDR 1074




244|SequenceR|1225|1216|AERKVADRGR

>sp|GP_SFTS|ENVELOPMENT polyprotein|Dabie bandavirus (Severe fever with

Query: 3 RKVADRGR 10
RK+ DRGR
Sbjct: 507 RKLMDRGR 514


>sp|VNUN_BPHK0|TRANSCRIPTION termination factor nun|Escherichia phage HK022 (Bacteriophage

Query: 3 RKVADRG 9
RKV+DRG
Sbjct: 18 RKVSDRG 24


>sp|VCG3_NPVOP|ZINC finger protein CG30|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 3 RKVADRGR 10
RK+A RGR
Sbjct: 49 RKIAQRGR 56




245|SequenceR|1230|1221|VPPLAAERKV

>sp|TEG5_BHV1P|TEGUMENT protein UL47|Bovine herpesvirus 1.1 (strain P8-2)

Query: 2 PPLAAERKV 10
PPLA +R+V
Sbjct: 680 PPLAGKRRV 688


>sp|TEG5_BHV1C|TEGUMENT protein UL47|Bovine herpesvirus 1.1 (strain Cooper)

Query: 2 PPLAAERKV 10
PPLA +R+V
Sbjct: 677 PPLAGKRRV 685




246|SequenceR|1235|1226|AKLPSVPPLA

>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 606 APVPTIPPL 614


>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 593 APVPTIPPL 601


>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 593 APVPTIPPL 601


>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 593 APVPTIPPL 601


>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 593 APVPTIPPL 601


>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 593 APVPTIPPL 601


>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 605 APVPTIPPL 613


>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 599 APVPTIPPL 607


>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 593 APVPTIPPL 601


>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 593 APVPTIPPL 601


>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 599 APVPTIPPL 607


>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 606 APVPTIPPL 614


>sp|VP8_RRSVT|STRUCTURAL protein precursor VP8|Rice ragged stunt virus (isolate

Query: 2 KLPSVPP 8
+LPS+PP
Sbjct: 293 ELPSIPP 299


>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 592 APVPTIPPL 600


>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 592 APVPTIPPL 600


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 592 APVPTIPPL 600


>sp|CD2H_ASFB7|CD2 homolog|African swine fever virus (strain

Query: 3 LPSVPPLA 10
LP++PPL+
Sbjct: 382 LPNIPPLS 389


>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)

Query: 1 AKLPSVPPL 9
A +P++PPL
Sbjct: 592 APVPTIPPL 600


>sp|CD2H_ASFP4|CD2 homolog|African swine fever virus (isolate

Query: 3 LPSVPPLA 10
LP++PPL+
Sbjct: 384 LPNIPPLS 391


>sp|VG11_ALHV1|UNCHARACTERIZED gene 11 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 LPSVPPLA 10
LP+ PPLA
Sbjct: 53 LPTCPPLA 60


>sp|RDRP_SCVLA|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-A

Query: 1 AKLPSVPPLA 10
+K S+PP+A
Sbjct: 1468 SKFMSIPPMA 1477


>sp|Y120_OSHVF|UNCHARACTERIZED protein ORF120|Ostreid herpesvirus 1 (isolate France)

Query: 1 AKLPSVPP 8
AKL S+PP
Sbjct: 26 AKLDSMPP 33


>sp|DPOL_BPAPS|PROBABLE DNA polymerase|Acyrthosiphon pisum secondary endosymbiont phage

Query: 1 AKLPSVPP 8
A LP++PP
Sbjct: 477 AALPNIPP 484


>sp|CD2H_ASFWA|CD2 homolog|African swine fever virus (isolate

Query: 3 LPSVPPLA 10
LP++PPL+
Sbjct: 361 LPNIPPLS 368


>sp|CD2H_ASFM2|CD2 homolog|African swine fever virus (isolate

Query: 3 LPSVPPLA 10
LP++PPL+
Sbjct: 355 LPNIPPLS 362




247|SequenceR|1240|1231|EESLAAKLPS

>sp|SCAF_BPMD2|PROBABLE capsid assembly scaffolding protein|Mycobacterium phage D29

Query: 1 EESLAAKLPS 10
E SLAAK+PS
Sbjct: 94 ETSLAAKVPS 103


>sp|RIR1_EHV2|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 2 (strain 86/87)

Query: 1 EESLAAKLP 9
EE LAAKLP
Sbjct: 289 EEFLAAKLP 297


>sp|TEG1_GAHVM|TEGUMENT protein UL46 homolog|Gallid herpesvirus 2 (strain

Query: 1 EESLAAKLPS 10
E+SL KLPS
Sbjct: 41 EDSLIEKLPS 50




248|SequenceR|1245|1236|KKELEEESLA

>sp|VP6_AHSV3|PROTEIN VP6|African horse sickness virus 3

Query: 1 KKELEEESLA 10
K+ELE+ S+A
Sbjct: 17 KRELEQRSIA 26




249|SequenceR|1250|1241|IIAKSKKELE

>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 IAKSKKELE 10
+AK +KELE
Sbjct: 1131 VAKKQKELE 1139


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 2 IAKSKKELE 10
+AK +KELE
Sbjct: 1104 VAKKQKELE 1112


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 2 IAKSKKELE 10
+AK +KELE
Sbjct: 1109 VAKKQKELE 1117


>sp|IBMP_FMVD|TRANSACTIVATOR/VIROPLASMIN protein|Figwort mosaic virus (strain DxS)

Query: 2 IAKSKKEL 9
IAK+KKEL
Sbjct: 358 IAKTKKEL 365




250|SequenceR|1255|1246|HLYEEIIAKS

>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 HLYEEIIAKS 10
H+Y+ ++AKS
Sbjct: 1761 HMYQRLVAKS 1770


>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 HLYEEIIAK 9
H+Y+E++AK
Sbjct: 199 HVYKEVLAK 207


>sp|DUHM_BPPM6|DEOXYURIDYLATE hydroxymethyltransferase|Pseudomonas phage M6

Query: 1 HLYEEIIAK 9
H YEE++ K
Sbjct: 215 HAYEEVLNK 223


>sp|GLYC_BCNVU|PRE-GLYCOPROTEIN polyprotein GP complex|Bear Canyon mammarenavirus (isolate

Query: 1 HLYEEIIAK 9
HL EI+AK
Sbjct: 399 HLVSEILAK 407




251|SequenceR|1260|1251|KMDNLHLYEE

>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1 KMDNLHLYEE 10
++D+L LYEE
Sbjct: 2074 RIDDLELYEE 2083


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 1 KMDNLHLYE 9
K+D +H+YE
Sbjct: 329 KIDGVHIYE 337


>sp|LYSB_BPMD2|ENDOLYSIN B|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 KMDNLHLYE 9
K D+LH YE
Sbjct: 172 KEDDLHEYE 180


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 KMDNLHL 7
K+DNLH+
Sbjct: 401 KIDNLHV 407


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 KMDNLHL 7
K+DNLH+
Sbjct: 400 KIDNLHV 406


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1 KMDNLHL 7
K+DNLH+
Sbjct: 399 KIDNLHV 405


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 DNLHLYE 9
D+LHLY+
Sbjct: 1818 DSLHLYK 1824


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 DNLHLYE 9
D+LHLY+
Sbjct: 1816 DSLHLYK 1822


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 DNLHLYE 9
D+LHLY+
Sbjct: 1816 DSLHLYK 1822


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 DNLHLYE 9
D+LHLY+
Sbjct: 1818 DSLHLYK 1824


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 DNLHLYE 9
D+LHLY+
Sbjct: 1816 DSLHLYK 1822


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 DNLHLYE 9
D+LHLY+
Sbjct: 1816 DSLHLYK 1822


>sp|YL573_MIMIV|UNCHARACTERIZED protein L573|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 MDNLHLYEE 10
MDN HL E
Sbjct: 1 MDNTHLIES 9




252|SequenceR|1265|1256|CQVAEKMDNL

>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)

Query: 2 QVAEKMDNL 10
Q++EKM NL
Sbjct: 177 QLSEKMQNL 185


>sp|T2C2_PBCV1|TYPE II restriction enzyme CviAII|Paramecium bursaria Chlorella virus 1

Query: 1 CQVAEKMDN 9
C V+EK DN
Sbjct: 113 CVVSEKKDN 121




253|SequenceR|1270|1261|ALEQVCQVAE

>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus

Query: 1 ALEQVCQVAE 10
ALE C++AE
Sbjct: 538 ALEASCELAE 547


>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate

Query: 1 ALEQVCQVAE 10
ALE C++AE
Sbjct: 538 ALEASCELAE 547


>sp|RIR1_VACCW|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Western Reserve)

Query: 1 ALEQVCQVAE 10
ALE C++AE
Sbjct: 538 ALEASCELAE 547


>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 ALEQVCQVAE 10
ALE C++AE
Sbjct: 538 ALEASCELAE 547


>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1 ALEQVCQVAE 10
ALE C++AE
Sbjct: 538 ALEASCELAE 547


>sp|LMBD2_REOVD|OUTER capsid protein lambda-2|Reovirus type 3 (strain Dearing)

Query: 1 ALEQVCQVA 9
ALE++C+ A
Sbjct: 965 ALEKICRTA 973




254|SequenceR|1275|1266|LLSPSALEQV

>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 LSPSALEQV 10
SP+A+EQV
Sbjct: 376 FSPAAIEQV 384


>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 LSPSALEQV 10
SP+A+EQV
Sbjct: 375 FSPAAIEQV 383


>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 LSPSALEQV 10
SP+A+EQV
Sbjct: 376 FSPAAIEQV 384


>sp|AN_PSHV1|ALKALINE nuclease|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 LSPSALEQV 10
LSPS +EQ+
Sbjct: 98 LSPSDIEQI 106


>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)

Query: 1 LLSPSALE 8
LL+PSALE
Sbjct: 353 LLNPSALE 360




255|SequenceR|1280|1271|RVFIFLLSPS

>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3

Query: 2 VFIFLLSPS 10
+FI+ LSPS
Sbjct: 4 IFIYGLSPS 12


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 2 VFIFLLSPS 10
+F FLL PS
Sbjct: 5133 MFAFLLDPS 5141




256|SequenceR|1285|1276|SEVGHRVFIF

>sp|DPOL_HVAVE|DNA polymerase|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 1 SEVGHRVFI 9
SEVG R FI
Sbjct: 127 SEVGKRAFI 135


>sp|L_LBVAV|RNA-DIRECTED RNA polymerase L|Lettuce big-vein associated virus (isolate

Query: 2 EVGHRVFI 9
+VGH+VF+
Sbjct: 1231 QVGHKVFM 1238


>sp|DPOL_SFAVA|DNA polymerase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 1 SEVGHRVFI 9
SEVG R F+
Sbjct: 136 SEVGKRAFV 144




257|SequenceR|1290|1281|SRELTSEVGH

>sp|NS1AB_ANV1|NON-STRUCTURAL polyprotein 1AB|Avian nephritis virus 1 (ANV-1)

Query: 2 RELTSEVGH 10
RELT E+G
Sbjct: 134 RELTDELGQ 142


>sp|NS1A_ANV1|NON-STRUCTURAL polyprotein 1A|Avian nephritis virus 1 (ANV-1)

Query: 2 RELTSEVGH 10
RELT E+G
Sbjct: 134 RELTDELGQ 142




258|SequenceR|1295|1286|ERAIASRELT

***** No hits found ******


259|SequenceR|1300|1291|LQGMHERAIA

***** No hits found ******


260|SequenceR|1305|1296|LLQHLLQGMH

>sp|NS7B_CVCAK|NON-STRUCTURAL protein 7b|Canine coronavirus (strain K378) (CCoV)

Query: 2 LQHLLQGMH 10
+QHL++G H
Sbjct: 154 MQHLVEGRH 162




261|SequenceR|1310|1301|LHGACLLQHL

>sp|CPRT_SBWMN|84 kDa readthrough protein|Soil-borne wheat mosaic virus (strain

Query: 2 HGACLLQH 9
HG C++QH
Sbjct: 524 HGTCIIQH 531


>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 2 HGACLLQH 9
HG CL++H
Sbjct: 224 HGPCLIRH 231


>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 2 HGACLLQH 9
HG CL++H
Sbjct: 224 HGPCLIRH 231


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 1 LHGACLLQHL 10
+H ACL Q+L
Sbjct: 459 IHDACLCQYL 468


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 LHGACLLQHL 10
+H ACL Q+L
Sbjct: 459 IHDACLCQYL 468


>sp|DPOL_VACCW|DNA polymerase|Vaccinia virus (strain Western Reserve)

Query: 1 LHGACLLQHL 10
+H ACL Q+L
Sbjct: 460 IHDACLCQYL 469


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LHGACLLQHL 10
+H ACL Q+L
Sbjct: 460 IHDACLCQYL 469


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 1 LHGACLLQHL 10
+H ACL Q+L
Sbjct: 460 IHDACLCQYL 469


>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 1 LHGACLLQHL 10
+H ACL Q+L
Sbjct: 460 IHDACLCQYL 469


>sp|RIR1_PSHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 LHGACLLQ 8
H ACLLQ
Sbjct: 540 FHTACLLQ 547


>sp|ENV_FENV1|ENVELOPE glycoprotein|Feline endogenous virus ECE1

Query: 1 LHGACLLQHL 10
+ G C+L HL
Sbjct: 627 MFGPCILNHL 636


>sp|L_BRSVA|RNA-DIRECTED RNA polymerase L|Bovine respiratory syncytial virus (strain

Query: 1 LHGACLLQ 8
LHG C+L+
Sbjct: 312 LHGDCILK 319


>sp|RDRP_POLVP|RNA-DIRECTED RNA polymerase|Pothos latent virus (isolate Pigeonpea/India)

Query: 1 LHGACLLQH 9
++ CLLQH
Sbjct: 221 VYXGCLLQH 229


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 1 LHGACLLQH 9
L G C+L+H
Sbjct: 105 LKGTCVLKH 113


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 1 LHGACLLQH 9
L G C+L+H
Sbjct: 105 LKGTCVLKH 113


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 1 LHGACLLQH 9
L G C+L+H
Sbjct: 105 LKGTCVLKH 113


>sp|YL112_MIMIV|PUTATIVE ankyrin repeat protein L112|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LHGACLLQHL 10
L+GAC+ H+
Sbjct: 225 LYGACINGHI 234


>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)

Query: 1 LHGACLLQHL 10
+HG L QHL
Sbjct: 391 VHGQTLEQHL 400


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 2 HGACLLQH 9
HG+C+ H
Sbjct: 631 HGSCISAH 638


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 1 LHGACLLQHL 10
LH ACL +L
Sbjct: 462 LHDACLCLYL 471




262|SequenceR|1315|1306|YQATSLHGAC

>sp|MODB_BPT4|NAD--PROTEIN ADP-ribosyltransferase modB|Enterobacteria phage T4 (Bacteriophage

Query: 4 TSLHGAC 10
TSLH AC
Sbjct: 102 TSLHTAC 108


>sp|NEC2_ALHV1|NUCLEAR egress protein 2|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 QATSLHGAC 10
Q+TSL G C
Sbjct: 225 QSTSLTGRC 233


>sp|YR614_MIMIV|PUTATIVE band 7 family protein|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YQATSLHGA 9
YQ T++H A
Sbjct: 137 YQVTNIHDA 145


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1 YQATSLHG 8
YQA ++HG
Sbjct: 2303 YQAPTVHG 2310




263|SequenceR|1320|1311|YLGQYYQATS

>sp|VP43_NPVAC|43 kDa protein|Autographa californica nuclear polyhedrosis virus

Query: 1 YLGQYYQAT 9
Y+GQYY ++
Sbjct: 302 YIGQYYTSS 310


>sp|DNBI_EHV2|MAJOR DNA-binding protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 YLGQYY 6
Y+GQYY
Sbjct: 1048 YMGQYY 1053


>sp|POLG_PVCV2|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 1 YLGQYYQATS 10
Y G+ YQ TS
Sbjct: 1175 YAGEQYQITS 1184


>sp|POLG_PVCV1|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 1 YLGQYYQATS 10
Y G+ YQ TS
Sbjct: 1174 YAGEQYQITS 1183


>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 YLGQYY 6
YLG+YY
Sbjct: 1039 YLGEYY 1044




264|SequenceR|1325|1316|LELIEYLGQY

>sp|POL2_APMV|RNA2 polyprotein|Andean potato mottle virus (APMV)

Query: 3 LIEYLGQY 10
+IEYLG+Y
Sbjct: 317 VIEYLGRY 324


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 2 ELIEYLGQY 10
E +EY+G Y
Sbjct: 835 EFVEYIGPY 843


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 ELIEYLGQY 10
E +EY+G Y
Sbjct: 835 EFVEYIGPY 843


>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 ELIEYLGQY 10
ELIEY+ Q+
Sbjct: 327 ELIEYVDQF 335


>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)

Query: 2 ELIEYLGQY 10
ELIEY+ Q+
Sbjct: 327 ELIEYVDQF 335


>sp|VG55_ICHVA|UNCHARACTERIZED protein ORF55|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 ELIEYLGQY 10
ELI+Y+ QY
Sbjct: 290 ELIDYIVQY 298


>sp|YL122_MIMIV|PUTATIVE ankyrin repeat protein L122|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LELIEYLGQY 10
L++I+YLG Y
Sbjct: 601 LDIIDYLGVY 610


>sp|006R_FRG3G|UNCHARACTERIZED protein 006R|Frog virus 3 (isolate Goorha)

Query: 2 ELIEYLGQY 10
E+IEYLG +
Sbjct: 57 EIIEYLGPW 65


>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 LELIEYLGQ 9
LEL++YL Q
Sbjct: 101 LELLDYLRQ 109


>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 LELIEYLGQ 9
LEL++YL Q
Sbjct: 101 LELLDYLRQ 109


>sp|DPOL_ABVP|DNA polymerase|Acidianus bottle-shaped virus (isolate Italy/Pozzuoli)

Query: 2 ELIEYLGQY 10
++IEY+G Y
Sbjct: 550 KIIEYVGNY 558


>sp|5056R_ASFP4|PROTEIN MGF 505-6R|African swine fever virus (isolate

Query: 1 LELIEYLGQ 9
E+IE++GQ
Sbjct: 177 FEIIEWIGQ 185


>sp|5057R_ASFM2|PROTEIN MGF 505-7R|African swine fever virus (isolate

Query: 2 ELIEYLGQ 9
E+IE++GQ
Sbjct: 178 EIIEWIGQ 185


>sp|5057R_ASFB7|PROTEIN MGF 505-7R|African swine fever virus (strain

Query: 1 LELIEYLGQ 9
E+IE++GQ
Sbjct: 177 FEIIEWIGQ 185




265|SequenceR|1330|1321|EMDEALELIE

***** No hits found ******


266|SequenceR|1335|1326|HPIDIEMDEA

>sp|EX0N_IIV3|PUTATIVE exonuclease 059L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 HPIDIEMD 8
HPI+I+MD
Sbjct: 498 HPIEIKMD 505


>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 IDIEMDEA 10
+DIE DEA
Sbjct: 214 VDIEADEA 221


>sp|YL137_MIMIV|UNCHARACTERIZED protein L137|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 HPIDIEM 7
HP D+EM
Sbjct: 628 HPRDVEM 634


>sp|EXO2_BPR69|EXONUCLEASE subunit 2|Escherichia phage RB69 (Bacteriophage RB69)

Query: 1 HPIDIEMDE 9
+PIDI++D+
Sbjct: 20 NPIDIQLDK 28


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 HPIDIEMDE 9
HP + MDE
Sbjct: 75 HPRQVPMDE 83


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)

Query: 1 HPIDIEMDE 9
HP + MDE
Sbjct: 75 HPRQVPMDE 83




267|SequenceR|1340|1331|LYLWVHPIDI

>sp|NEEDL_BPKVM|PROTEIN Gp5|Vibrio phage KVP40 (isolate Vibrio

Query: 3 LWVHPI 8
LWVHP+
Sbjct: 52 LWVHPM 57


>sp|CAPSD_AQRVG|INNER capsid protein VP3|Aquareovirus G (isolate American grass

Query: 4 WVHPIDI 10
W++PID+
Sbjct: 1046 WIYPIDV 1052


>sp|LT_POVLY|LARGE T antigen|B-lymphotropic polyomavirus (LPV)

Query: 1 LYLWVHPID 9
L LW +P+D
Sbjct: 640 LLLWYNPVD 648


>sp|RDRP_BOOLV|RNA-DIRECTED RNA polymerase|Boolarra virus (BoV)

Query: 4 WVHPI 8
WVHP+
Sbjct: 215 WVHPV 219


>sp|RDRP_BBV|RNA-DIRECTED RNA polymerase|Black beetle virus (BBV)

Query: 4 WVHPI 8
WVHP+
Sbjct: 215 WVHPV 219


>sp|RDRP_FHV|RNA-DIRECTED RNA polymerase|Flock house virus (FHV)

Query: 4 WVHPI 8
WVHP+
Sbjct: 215 WVHPV 219


>sp|REXA_LAMBD|PROTEIN rexA|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 YLWVHPID 9
YL++H ID
Sbjct: 43 YLYIHKID 50


>sp|REXA_BP434|PROTEIN rexA|Enterobacteria phage 434 (Bacteriophage 434)

Query: 2 YLWVHPID 9
YL++H ID
Sbjct: 43 YLYIHKID 50


>sp|ENLYS_BP263|ENDOLYSIN 2638A|Staphylococcus phage 2638A

Query: 3 LWVHPID 9
LW HP D
Sbjct: 245 LWYHPTD 251


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 1 LYLWVH 6
LYLW H
Sbjct: 469 LYLWSH 474


>sp|RPC_BP163|REPRESSOR protein C|Rhizobium phage 16-3 (Bacteriophage 16-3)

Query: 3 LWVHP 7
+WVHP
Sbjct: 188 VWVHP 192


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 3 LWVHP 7
LW+HP
Sbjct: 668 LWLHP 672


>sp|VP7_RRSVT|MICROTUBULE-ASSOCIATED protein VP7|Rice ragged stunt virus (isolate

Query: 1 LYLWVHPIDI 10
L+ +VHP D+
Sbjct: 97 LHYYVHPADM 106


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 3 LWVHPI 8
LW HPI
Sbjct: 62 LWNHPI 67


>sp|POL_IPMAI|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 3 LWVHP 7
LW+HP
Sbjct: 273 LWIHP 277


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 3 LWVHPI 8
LW HPI
Sbjct: 62 LWNHPI 67


Query: 3 LWVHP 7
LW+HP
Sbjct: 668 LWLHP 672


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 3 LWVHPI 8
LW HPI
Sbjct: 62 LWNHPI 67


Query: 3 LWVHP 7
LW+HP
Sbjct: 668 LWLHP 672


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 4 WVHPI 8
W+HPI
Sbjct: 695 WMHPI 699


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 1 LYLWVHPI 8
L LW HP+
Sbjct: 357 LRLWGHPL 364


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 1 LYLWVHPI 8
L LW HP+
Sbjct: 357 LRLWGHPL 364


>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)

Query: 3 LWVHPI 8
+W HPI
Sbjct: 361 IWAHPI 366


>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2

Query: 3 LWVHPID 9
+W++PID
Sbjct: 58 IWLNPID 64


>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 4 WVHPIDI 10
W HP D+
Sbjct: 1744 WAHPSDL 1750


>sp|DGTPH_BPS2L|DATP/DGTP diphosphohydrolase|Cyanophage S-2L (Cyanobacteria phage S-2L)

Query: 4 WVHPID 9
W+HP++
Sbjct: 15 WIHPLN 20


>sp|VPRL_CAEVC|PROBABLE Vpr-like protein|Caprine arthritis encephalitis virus (strain

Query: 2 YLWVHP 7
++W+HP
Sbjct: 63 WMWIHP 68


>sp|POL_IPMA|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 3 LWVHP 7
LW+HP
Sbjct: 354 LWIHP 358


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 2 YLWVHPI 8
Y+W+H I
Sbjct: 217 YIWLHQI 223


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1 LYLWVHP 7
L+ W+HP
Sbjct: 692 LFNWLHP 698


>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2

Query: 3 LWVHPID 9
+W++PID
Sbjct: 58 IWLNPID 64


>sp|CAPSD_AQRVC|INNER capsid protein VP3|Aquareovirus C (isolate Golden

Query: 4 WVHPIDI 10
WV+P D+
Sbjct: 1045 WVYPSDV 1051


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 3 LWVHPIDI 10
+W HP D+
Sbjct: 1714 VWEHPSDL 1721




268|SequenceR|1345|1336|TVLEALYLWV

>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 TVLEALYLW 9
T L +LYLW
Sbjct: 770 TKLSSLYLW 778


>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 TVLEALYLW 9
T L +LYLW
Sbjct: 770 TKLSSLYLW 778


>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 TVLEALYLW 9
T L +LYLW
Sbjct: 770 TKLSSLYLW 778


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 2 VLEALYLWV 10
VL +LY W+
Sbjct: 1288 VLSSLYYWI 1296


>sp|PTPJ4_MDBVW|PROBABLE tyrosine phosphatase protein J4|Microplitis demolitor bracovirus

Query: 4 EALYLWV 10
+ALY+W+
Sbjct: 284 QALYVWI 290


>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 LEALYLW 9
+ ALYLW
Sbjct: 774 ISALYLW 780


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 1 TVLEALYLW 9
T ALYLW
Sbjct: 776 TKTSALYLW 784


>sp|50511_ASFK5|PROTEIN MGF 505-11L|African swine fever virus (isolate

Query: 2 VLEALYLWV 10
+LE L LWV
Sbjct: 70 ILETLVLWV 78


>sp|DUHM_BPSP1|DEOXYURIDYLATE hydroxymethyltransferase|Bacillus phage SP01 (Bacteriophage SP01)

Query: 1 TVLEALYLWV 10
T+LEA+ W+
Sbjct: 200 TILEAMATWL 209




269|SequenceR|1350|1341|EQLIPTVLEA

>sp|VL2_PAPVE|MINOR capsid protein L2|European elk papillomavirus (EEPV)

Query: 2 QLIPTVLE 9
+LIPTVLE
Sbjct: 352 ELIPTVLE 359


>sp|POL2_TORVR|RNA2 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 2 QLIPTVLEA 10
+++P VLEA
Sbjct: 713 EMVPAVLEA 721




270|SequenceR|1355|1346|MPVGGEQLIP

>sp|HLOAD_BPT4|DNA helicase assembly protein|Enterobacteria phage T4 (Bacteriophage

Query: 1 MPVGGEQLI 9
MP GGE+ I
Sbjct: 6 MPAGGERYI 14


>sp|FIBER_BPSFV|TAIL spike protein|Shigella phage Sf6 (Shigella flexneri

Query: 1 MPVGGEQLIP 10
+P GGE IP
Sbjct: 190 LPSGGELFIP 199


>sp|HEPA_GAHVM|DNA helicase/primase complex-associated protein|Gallid herpesvirus 2

Query: 2 PVGGEQLIP 10
PV GE+ IP
Sbjct: 151 PVSGERSIP 159


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 2 PVGGEQLIP 10
PV GE++IP
Sbjct: 2932 PVLGERVIP 2940


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 2 PVGGEQLIP 10
PV GE++IP
Sbjct: 3022 PVLGERVIP 3030


>sp|VF232_IIV3|PUTATIVE ubiquitin thioesterase 232R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 MPVGGEQLIP 10
+ VGG QL+P
Sbjct: 779 ISVGGSQLVP 788


>sp|RDRP_THOGV|RNA-DIRECTED RNA polymerase catalytic subunit|Thogoto virus (isolate SiAr 126)

Query: 1 MPVGGEQ 7
+PVGGE+
Sbjct: 273 VPVGGEE 279


>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain

Query: 1 MPVGGEQ 7
+PVGGE+
Sbjct: 274 VPVGGEE 280




271|SequenceR|1360|1351|RFLEGMPVGG

>sp|RIP_ATV|RNAP inhibitory protein|Acidianus two-tailed virus (ATV)

Query: 1 RFLEGMPVGG 10
R+LEG P G
Sbjct: 62 RYLEGSPYDG 71


>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16

Query: 1 RFLEGMP 7
RFL+G+P
Sbjct: 462 RFLQGIP 468


>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky

Query: 1 RFLEGMPVGG 10
R+LEG P G
Sbjct: 77 RYLEGHPSAG 86


>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 272 GLPVGG 277


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 272 GLPVGG 277


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 272 GLPVGG 277


>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I86A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I83A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I83A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I83A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I80AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I80A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I80A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I79A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Grey

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I78AC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I77AF|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I68A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I66A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I66A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I56A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I56A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I49A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 5 GMPVGG 10
G+PVGG
Sbjct: 270 GLPVGG 275


>sp|VG58_BPMD2|GENE 58 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 RFLEGMPVGG 10
R EG+ VGG
Sbjct: 78 RIAEGLSVGG 87




272|SequenceR|1365|1356|PKTIERFLEG

>sp|RIP_ATV|RNAP inhibitory protein|Acidianus two-tailed virus (ATV)

Query: 2 KTIERFLEG 10
KTI R+LEG
Sbjct: 58 KTIRRYLEG 66


>sp|Y113_OSHVF|UNCHARACTERIZED protein ORF113|Ostreid herpesvirus 1 (isolate France)

Query: 2 KTIERFLEG 10
+TI RF EG
Sbjct: 100 RTIHRFTEG 108


>sp|VG50_BPML5|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate

Query: 1 PKTIERFLEG 10
P+T+ER ++G
Sbjct: 32 PETVERVVDG 41


>sp|RDRP_SCPMV|REPLICASE polyprotein P2AB|Southern cowpea mosaic virus (SCPMV)

Query: 1 PKTIERFL 8
PKT+ RFL
Sbjct: 850 PKTLYRFL 857


>sp|REP1_FBNC1|PARA-REP C1|Faba bean necrotic yellows C1

Query: 2 KTIERFLE 9
KT+ER+LE
Sbjct: 104 KTMERYLE 111


>sp|VG50_BPMD2|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate

Query: 1 PKTIERFLEG 10
P+T+ER + G
Sbjct: 33 PETVERVVSG 42


>sp|YL113_MIMIV|UNCHARACTERIZED protein L113|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PKTIERFL 8
PK +ERF+
Sbjct: 111 PKCLERFI 118


>sp|247L_IIV6|UNCHARACTERIZED protein 247L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 KTIERFLE 9
KTIE F+E
Sbjct: 74 KTIEEFIE 81




273|SequenceR|1370|1361|GLPRLPKTIE

>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)

Query: 1 GLPRLPKTIE 10
G PR+ KT+E
Sbjct: 131 GAPRMQKTVE 140


>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1

Query: 2 LPRLPKTI 9
LPR P TI
Sbjct: 189 LPRFPSTI 196


>sp|YR366_MIMIV|PUTATIVE ATP-dependent RNA helicase R366|Acanthamoeba polyphaga mimivirus

Query: 3 PRLPKTIE 10
PR+P T+E
Sbjct: 703 PRVPPTVE 710


>sp|L_PIRVV|RNA-DIRECTED RNA polymerase L|Pirital mammarenavirus (isolate

Query: 1 GLPRLPKTI 9
G P LPKT+
Sbjct: 1691 GAPILPKTV 1699


>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)

Query: 2 LPRLPKTIE 10
LPRLP ++E
Sbjct: 177 LPRLPSSLE 185


>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 2 LPRLPKTI 9
LPRLPK +
Sbjct: 273 LPRLPKIL 280


>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)

Query: 2 LPRLPKTIE 10
LPRLP ++E
Sbjct: 177 LPRLPSSLE 185


>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)

Query: 2 LPRLPKTIE 10
LPRLP ++E
Sbjct: 177 LPRLPSSLE 185


>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 3 PRLPKTIE 10
PR+P T+E
Sbjct: 628 PRVPDTVE 635


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 3 PRLPKTI 9
P LPKT+
Sbjct: 1014 PNLPKTV 1020




274|SequenceR|1375|1366|LSAAKGLPRL

>sp|AN_SHV21|SHUTOFF alkaline exonuclease|Saimiriine herpesvirus 2 (strain 11)

Query: 3 AAKGLPRL 10
AAKG+P+L
Sbjct: 89 AAKGVPKL 96


>sp|Y01A_BPT4|UNCHARACTERIZED 12.1 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 LSAAKGLPRL 10
L+ KG+PRL
Sbjct: 48 LALGKGIPRL 57


>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)

Query: 5 KGLPRL 10
KGLPRL
Sbjct: 699 KGLPRL 704


>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 KGLPRL 10
KGLPRL
Sbjct: 699 KGLPRL 704


>sp|CAPSD_JDNVP|CAPSID protein VP1|Junonia coenia densovirus (isolate pBRJ/1990)

Query: 2 SAAKGLPRL 10
SAA GLP L
Sbjct: 51 SAAVGLPEL 59




275|SequenceR|1380|1371|LIELLLSAAK

***** No hits found ******


276|SequenceR|1385|1376|KCLLGLIELL

>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)

Query: 2 CLLGLIELL 10
C+ GLIE+L
Sbjct: 468 CMAGLIEIL 476


>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)

Query: 2 CLLGLIELL 10
C+ GLIE+L
Sbjct: 467 CMAGLIEIL 475


>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)

Query: 2 CLLGLIELL 10
C+ GLIE+L
Sbjct: 468 CMAGLIEIL 476




277|SequenceR|1390|1381|KPGMSKCLLG

>sp|VF203_IIV6|UNCHARACTERIZED protein 203L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 KPGMSKCL 8
KPG+ KCL
Sbjct: 148 KPGVLKCL 155


>sp|PRIM_SUHVK|DNA primase|Suid herpesvirus 1 (strain Kaplan)

Query: 1 KPGMSKCLLG 10
+PG++ CL G
Sbjct: 64 RPGVTFCLTG 73


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 1 KPGMSKCLLG 10
+PG+S+ LLG
Sbjct: 775 EPGVSRELLG 784


>sp|Y061_OSHVF|UNCHARACTERIZED protein ORF61|Ostreid herpesvirus 1 (isolate France)

Query: 2 PGMSKC 7
PGMS C
Sbjct: 349 PGMSSC 354


>sp|UL52_EHV4|DNA helicase/primase complex protein|Equine herpesvirus 4 (strain

Query: 1 KPGMSKCLL 9
KP +S CLL
Sbjct: 86 KPSVSFCLL 94


>sp|PRIM_EHV1V|DNA primase|Equine herpesvirus 1 (strain V592)

Query: 1 KPGMSKCLL 9
KP +S CLL
Sbjct: 86 KPSVSFCLL 94


>sp|PRIM_EHV1B|DNA primase|Equine herpesvirus 1 (strain Ab4p)

Query: 1 KPGMSKCLL 9
KP +S CLL
Sbjct: 86 KPSVSFCLL 94


>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain

Query: 1 KPGMSKC 7
+PG+ KC
Sbjct: 459 RPGLGKC 465


>sp|VG78_ICHVA|PUTATIVE zinc-binding protein ORF78|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 PGMSKCLL 9
PGM CLL
Sbjct: 281 PGMDMCLL 288


>sp|VF219_IIV6|UNCHARACTERIZED protein 219L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 PGMSKCLL 9
PG+ CLL
Sbjct: 319 PGVDNCLL 326




278|SequenceR|1395|1386|LTGVKKPGMS

>sp|V002_FOWPN|UNCHARACTERIZED protein FPV002/FPV259|Fowlpox virus (strain NVSL) (FPV)

Query: 1 LTGVKKPG 8
LTGV++PG
Sbjct: 140 LTGVREPG 147


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 LTGVKKP 7
L+GVKKP
Sbjct: 2041 LSGVKKP 2047


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 LTGVKKP 7
L+GVKKP
Sbjct: 2041 LSGVKKP 2047


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 LTGVKKP 7
L+GVKKP
Sbjct: 2041 LSGVKKP 2047


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 LTGVKKP 7
L+GVKKP
Sbjct: 2041 LSGVKKP 2047


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 LTGVKKP 7
L+GVKKP
Sbjct: 2041 LSGVKKP 2047


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 LTGVKKP 7
L+GVKKP
Sbjct: 2041 LSGVKKP 2047


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 LTGVKKP 7
L+GVKKP
Sbjct: 2041 LSGVKKP 2047


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 LTGVKKP 7
L+GVKKP
Sbjct: 2041 LSGVKKP 2047


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 LTGVKKP 7
L+GVKKP
Sbjct: 2041 LSGVKKP 2047


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 LTGVKKP 7
L+GVKKP
Sbjct: 2041 LSGVKKP 2047


>sp|US04_HCMVA|UNCHARACTERIZED protein US4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 TGVKKPGMS 10
TG+ KPG+S
Sbjct: 14 TGISKPGLS 22


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 2 TGVKKPGMS 10
TGVK+P +S
Sbjct: 477 TGVKRPAVS 485


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 2 TGVKKPGMS 10
TGVK+P +S
Sbjct: 477 TGVKRPAVS 485


>sp|YR513_MIMIV|UNCHARACTERIZED protein R513|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LTGVKKPG 8
LTG+ KPG
Sbjct: 14 LTGILKPG 21


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 LTGVKKPG 8
LTG KKP
Sbjct: 1944 LTGYKKPA 1951


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 LTGVKKPG 8
LTG KKP
Sbjct: 1944 LTGYKKPA 1951


>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)

Query: 2 TGVKKPGMS 10
TGV KPG S
Sbjct: 202 TGVGKPGDS 210


>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 2 TGVKKPGMS 10
TG+K+P +S
Sbjct: 478 TGIKRPAVS 486




279|SequenceR|1400|1391|GAERWLTGVK

>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 1 GAERWLTGV 9
GA++W T V
Sbjct: 1049 GADKWATAV 1057


>sp|PRO_SMRVH|GAG-PRO polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 2 AERWLT 7
+ERWLT
Sbjct: 409 SERWLT 414


>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 2 AERWLT 7
+ERWLT
Sbjct: 409 SERWLT 414


>sp|GAG_SMRVH|GAG polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 2 AERWLT 7
+ERWLT
Sbjct: 409 SERWLT 414


>sp|AP3A_SARS2|ORF3A protein|Severe acute respiratory syndrome coronavirus

Query: 3 ERWLTGVK 10
E+W +GVK
Sbjct: 191 EKWESGVK 198


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 2 AERWLTGVK 10
+ERW GV+
Sbjct: 1326 SERWAAGVE 1334


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 GAERWLTG 8
G + WLTG
Sbjct: 342 GNDSWLTG 349


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related

Query: 1 GAERWLTG 8
G + WLTG
Sbjct: 342 GNDSWLTG 349


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 3 ERWLTGVK 10
E W TG+K
Sbjct: 826 ETWYTGMK 833


>sp|LMBD2_REOVJ|OUTER capsid protein lambda-2|Reovirus type 2 (strain D5/Jones)

Query: 2 AERWLTGVK 10
++ W+TGV+
Sbjct: 873 SDGWITGVR 881


>sp|LMBD2_REOVD|OUTER capsid protein lambda-2|Reovirus type 3 (strain Dearing)

Query: 2 AERWLTGVK 10
++ W+TGV+
Sbjct: 874 SDGWITGVR 882


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 3 ERWLTGVK 10
+ WLTG K
Sbjct: 2076 DMWLTGCK 2083


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3 ERWLTGVK 10
+ WLTG K
Sbjct: 2076 DMWLTGCK 2083




280|SequenceR|1405|1396|EKWSLGAERW

>sp|VC13_SWPVK|PROTEIN C13|Swinepox virus (strain Kasza) (SWPV)

Query: 1 EKWSLGAERW 10
E WS G ++W
Sbjct: 366 ESWSPGEQQW 375


>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)

Query: 1 EKWSLGAER 9
++WSL AER
Sbjct: 225 DRWSLVAER 233


>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)

Query: 1 EKWSLGAER 9
++WSL AER
Sbjct: 225 DRWSLVAER 233


>sp|GP_HAZVJ|ENVELOPMENT polyprotein|Hazara virus (isolate JC280)

Query: 2 KWSLGAE 8
+WSLG+E
Sbjct: 855 QWSLGSE 861


>sp|VPN7_BPPHE|TAIL fiber protein|Enterococcus phage phiEF24C (Enterococcus bacteriophage

Query: 3 WSLGAERW 10
W+LG RW
Sbjct: 1423 WNLGFGRW 1430


>sp|HSP7L_MIMIV|HEAT shock protein 70 homolog|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 WSLGAERW 10
+ LG+E+W
Sbjct: 203 YGLGSEKW 210


>sp|VMT9_MYXVL|KELCH repeat protein M-T9|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 EKWSLGAERW 10
E W G E W
Sbjct: 339 EYWQPGMEEW 348


>sp|11011_ASFM2|PROTEIN MGF 360-3L|African swine fever virus (isolate

Query: 1 EKWSLGAERW 10
EKW G + W
Sbjct: 113 EKWGGGGDYW 122


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 EKWSLGA 7
E WS+GA
Sbjct: 250 ESWSVGA 256


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 EKWSLGA 7
E WS+GA
Sbjct: 250 ESWSVGA 256


>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)

Query: 1 EKWSLGAERW 10
E+W G + W
Sbjct: 93 EEWQFGGQGW 102


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 EKWSLGAERW 10
++W++ RW
Sbjct: 2070 DEWAIAGPRW 2079


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 EKWSLGAERW 10
++W++ RW
Sbjct: 2073 DEWAIAGPRW 2082


>sp|G3P_BPPHL|ATTACHMENT protein G3P|Xanthomonas phage phiLf (Bacteriophage phi-Lf)

Query: 3 WSLGAERW 10
+SLGA +W
Sbjct: 321 FSLGASKW 328




281|SequenceR|1410|1401|GEPLFEKWSL

>sp|Y028_OSHVF|UNCHARACTERIZED protein ORF28|Ostreid herpesvirus 1 (isolate France)

Query: 1 GEPLFEKWSL 10
G+PL +KW +
Sbjct: 730 GKPLSQKWDM 739


>sp|YL887_MIMIV|PUTATIVE JmjC domain-containing protein L887|Acanthamoeba polyphaga

Query: 3 PLFEKWS 9
PLF KWS
Sbjct: 290 PLFPKWS 296


>sp|RIR1_ALHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 EPLFEKWSL 10
EPL EK+SL
Sbjct: 657 EPLKEKYSL 665


>sp|VF717_ASFK5|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 1 GEPLFEKW 8
G P F KW
Sbjct: 22 GSPSFRKW 29


>sp|VF717_ASFM2|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 1 GEPLFEKW 8
G P F KW
Sbjct: 22 GSPSFRKW 29


>sp|VF717_ASFB7|UNCHARACTERIZED protein C717R|African swine fever virus (strain

Query: 1 GEPLFEKW 8
G P F KW
Sbjct: 22 GSPSFRKW 29


>sp|VF717_ASFWA|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 1 GEPLFEKW 8
G P F KW
Sbjct: 22 GSPSFRKW 29


>sp|VF717_ASFP4|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 1 GEPLFEKW 8
G P F KW
Sbjct: 22 GSPSFRKW 29


>sp|EXLYS_BPDPK|PEPTIDOGLYCAN hydrolase gp181|Pseudomonas phage phiKZ

Query: 2 EPLFEKW 8
+P+FE W
Sbjct: 1440 KPIFEAW 1446


>sp|YR400_MIMIV|PUTATIVE serine/threonine-protein kinase R400|Acanthamoeba polyphaga

Query: 2 EPLFEKW 8
+PLFEK+
Sbjct: 417 DPLFEKY 423


>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)

Query: 4 LFEKW 8
LFEKW
Sbjct: 354 LFEKW 358


>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)

Query: 4 LFEKW 8
LFEKW
Sbjct: 638 LFEKW 642


>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 LFEKW 8
LFEKW
Sbjct: 638 LFEKW 642


>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 3 PLFEKWSL 10
P+F+ W+L
Sbjct: 93 PVFDNWAL 100


>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 EPLFEKWSL 10
EP+ WSL
Sbjct: 445 EPVINAWSL 453


>sp|RDRP_BPMX1|RNA-DIRECTED RNA polymerase subunit beta|Qbeta virus (strain MX1)

Query: 1 GEPLFEKWSL 10
G L+E WSL
Sbjct: 507 GSYLYELWSL 516


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 3 PLFEKWSL 10
PL +KW +
Sbjct: 2302 PLLQKWQM 2309


>sp|VG43_ICHVA|UNCHARACTERIZED protein ORF43|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 PLFEKW 8
P+F KW
Sbjct: 729 PIFNKW 734


>sp|POLN_ABPVR|REPLICASE polyprotein|Acute bee paralysis virus (strain

Query: 2 EPLFEKWS 9
E +F+KWS
Sbjct: 1866 EYVFDKWS 1873




282|SequenceR|1415|1406|AGIDQGEPLF

>sp|L_TACVF|RNA-DIRECTED RNA polymerase L|Tacaribe virus (strain Franze-Fernandez) (TCRV)

Query: 3 IDQGEPL 9
+DQGEPL
Sbjct: 2073 VDQGEPL 2079


>sp|VE1_PAPVE|REPLICATION protein E1|European elk papillomavirus (EEPV)

Query: 4 DQGEPLF 10
D GEPLF
Sbjct: 557 DTGEPLF 563


>sp|VE1_OVPVD|REPLICATION protein E1|Odocoileus virginianus papillomavirus 1 (DPV)

Query: 4 DQGEPLF 10
D GEP+F
Sbjct: 559 DNGEPMF 565


>sp|CAPSD_AAV2S|CAPSID protein VP1|Adeno-associated virus 2 (isolate Srivastava/1982)

Query: 2 GIDQGEPL 9
G+D+GEP+
Sbjct: 58 GLDKGEPV 65


>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)

Query: 1 AGIDQGEPLF 10
AGI +G+P F
Sbjct: 307 AGISRGKPNF 316


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 2 GIDQGEP 8
G+D+G+P
Sbjct: 1774 GVDKGQP 1780


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 2 GIDQGEP 8
G+D+G+P
Sbjct: 1774 GVDKGQP 1780


>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 4 DQGEPL 9
DQGEP+
Sbjct: 1331 DQGEPI 1336


>sp|CAPSD_MUMIP|CAPSID protein VP1|Murine minute virus (strain MVM

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 26 LDQGEP 31


>sp|CAPSD_MUMIM|CAPSID protein VP1|Murine minute virus (strain MVMi)

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 26 LDQGEP 31


>sp|CAPSD_PAVPN|CAPSID protein VP1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 25 LDQGEP 30


>sp|CAPSD_PAVHH|CAPSID protein VP1|Hamster parvovirus H1

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 26 LDQGEP 31


>sp|CAPSD_PAVPK|CAPSID protein VP1|Porcine parvovirus (strain Kresse) (PPV)

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 25 LDQGEP 30


>sp|CAPSD_PAVP9|CAPSID protein VP1|Porcine parvovirus (strain 90HS) (PPV)

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 25 LDQGEP 30


>sp|CAPSD_PAVCN|CAPSID protein VP1|Canine parvovirus type 2 (isolate

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 26 LDQGEP 31


>sp|CAPSD_PAVCD|CAPSID protein VP1|Canine parvovirustype 2 (isolate Dog/United

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 26 LDQGEP 31


>sp|CAPSD_PAVCB|CAPSID protein VP1|Canine parvovirus type 2 (isolate

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 26 LDQGEP 31


>sp|CAPSD_MEVA|CAPSID protein VP1|Mink enteritis virus (strain Abashiri)

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 21 LDQGEP 26


>sp|CAPSD_FPV19|CAPSID protein VP1|Feline panleukopenia virus (strain 193)

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 26 LDQGEP 31


>sp|CAPSD_PAVC7|CAPSID protein VP1|Canine parvovirus type 2 (strain

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 26 LDQGEP 31


>sp|CAPSD_FPV|CAPSID protein VP1|Feline panleukopenia virus (FPV)

Query: 3 IDQGEP 8
+DQGEP
Sbjct: 26 LDQGEP 31




283|SequenceR|1420|1411|QEAVFAGIDQ

>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 2 EAVFAGID 9
EA+F GID
Sbjct: 1420 EAIFQGID 1427


>sp|CAPSD_SHVX|CAPSID protein|Shallot virus X (ShVX)

Query: 1 QEAVFAGID 9
+EA FAG D
Sbjct: 184 EEAKFAGFD 192




284|SequenceR|1425|1416|TYEVKQEAVF

>sp|GP_BUNGE|ENVELOPMENT polyprotein|Bunyavirus germiston

Query: 1 TYEVKQEAV 9
TY++KQE V
Sbjct: 707 TYQLKQEWV 715


>sp|VPR_SIVTN|PROTEIN Vpr|Simian immunodeficiency virus (isolate TAN1)

Query: 3 EVKQEAV 9
E+KQEAV
Sbjct: 25 EIKQEAV 31


>sp|PORTL_BPAPS|PORTAL protein|Acyrthosiphon pisum secondary endosymbiont phage

Query: 2 YEVKQEAV 9
YEVK+E+V
Sbjct: 230 YEVKKESV 237




285|SequenceR|1430|1421|SEEGLTYEVK

>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 1 SEEGLTYEVK 10
S+EGL YE++
Sbjct: 744 SQEGLLYELE 753


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 1 SEEGLTYEVK 10
S+EGL YE++
Sbjct: 744 SQEGLLYELE 753


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 1 SEEGLTYEVK 10
S+EGL YE++
Sbjct: 744 SQEGLLYELE 753


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 1 SEEGLTYEVK 10
S+EGL YE++
Sbjct: 744 SQEGLLYELE 753


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 1 SEEGLTYEVK 10
S+EGL YE++
Sbjct: 744 SQEGLLYELE 753


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 1 SEEGLTYEVK 10
S+EGL YE++
Sbjct: 744 SQEGLLYELE 753


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 1 SEEGLTYEVK 10
S+EGL YE++
Sbjct: 744 SQEGLLYELE 753


>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 1 SEEGLTYE 8
S EGLTYE
Sbjct: 427 SGEGLTYE 434


>sp|CAPSP_ADES1|PENTON protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 2 EEGLTYEVK 10
E GLTY V+
Sbjct: 264 ENGLTYHVQ 272


>sp|POL1_BAMMN|GENOME polyprotein 1|Barley mild mosaic virus (strain

Query: 1 SEEGLTYE 8
SE GLTYE
Sbjct: 1878 SELGLTYE 1885


>sp|VG41_BPMD2|GENE 41 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 SEEGLTYEV 9
+EEG+T++V
Sbjct: 26 AEEGITFQV 34


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 1 SEEGLTYEVK 10
S EGL YE++
Sbjct: 745 SREGLLYELE 754


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 SEEGLTYEVK 10
S EGL YE++
Sbjct: 745 SHEGLLYELE 754


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 1 SEEGLTYEVK 10
S EGL YE++
Sbjct: 744 SREGLLYELE 753


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 3 EGLTYEVK 10
EGL YE K
Sbjct: 475 EGLVYEAK 482


>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 3 EGLTYEVK 10
EGL YE K
Sbjct: 475 EGLVYEAK 482


>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3

Query: 1 SEEGLTYEVK 10
+E+G T EVK
Sbjct: 88 TEDGTTLEVK 97


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 3 EGLTYEVK 10
EGL YE K
Sbjct: 474 EGLMYEAK 481


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 3 EGLTYEVK 10
EGL YE K
Sbjct: 474 EGLMYEAK 481


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 3 EGLTYEVK 10
EGL YE K
Sbjct: 474 EGLMYEAK 481


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 3 EGLTYEVK 10
EGL YE K
Sbjct: 474 EGLMYEAK 481


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 3 EGLTYEVK 10
EGL YE K
Sbjct: 474 EGLMYEAK 481




286|SequenceR|1435|1426|QGPAESEEGL

>sp|015R_FRG3G|UNCHARACTERIZED protein 015R|Frog virus 3 (isolate Goorha)

Query: 2 GPAESEEGL 10
GP++ EEGL
Sbjct: 299 GPSDDEEGL 307


>sp|IBMP_CYLCV|TRANSACTIVATOR/VIROPLASMIN protein|Cestrum yellow leaf curling virus

Query: 2 GPAESEEGL 10
GP SEEGL
Sbjct: 511 GPQTSEEGL 519


>sp|GP6_BPHK7|HEAD completion protein gp6|Enterobacteria phage HK97 (Bacteriophage

Query: 1 QGPAESEEG 9
+G AESEEG
Sbjct: 99 RGKAESEEG 107


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 1 QGPAESEEGL 10
+ PA EEGL
Sbjct: 22 ENPAAEEEGL 31




287|SequenceR|1440|1431|SPLARQGPAE

>sp|CAPSH_ADEG1|HEXON protein|Fowl adenovirus A serotype 1

Query: 2 PLARQGP 8
P++RQGP
Sbjct: 772 PMSRQGP 778


>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)

Query: 2 PLARQGPAE 10
PL R GPAE
Sbjct: 742 PLTRFGPAE 750


>sp|E1BS_ADES7|E1B protein, small T-antigen|Simian adenovirus serotype 7 (SAdV-7)

Query: 1 SPLARQG 7
+PLARQG
Sbjct: 145 APLARQG 151




288|SequenceR|1445|1436|RNLEESPLAR

>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 RNLEESPL 8
+NLEESP+
Sbjct: 379 KNLEESPI 386


>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)

Query: 1 RNLEESPL 8
+NLEESP+
Sbjct: 379 KNLEESPI 386


>sp|TGB1_PMV|MOVEMENT and silencing protein TGBp1|Papaya mosaic potexvirus (PMV)

Query: 3 LEESPLAR 10
LEE PLAR
Sbjct: 42 LEEQPLAR 49


>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24

Query: 2 NLEESPLA 9
N+EE+PLA
Sbjct: 401 NIEENPLA 408




289|SequenceR|1450|1441|LKELQRNLEE

>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 LKELQRNL 8
L+E+QRNL
Sbjct: 281 LREVQRNL 288


>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 LKELQRNL 8
L+E+QRNL
Sbjct: 281 LREVQRNL 288


>sp|ENV_BAEVM|ENVELOPE glycoprotein|Baboon endogenous virus (strain M7)

Query: 1 LKELQRNLEE 10
+K +QR LEE
Sbjct: 176 IKSVQRKLEE 185


>sp|MVP_TSWV1|MOVEMENT protein|Tomato spotted wilt virus (strain

Query: 1 LKELQRNLE 9
LKEL NLE
Sbjct: 271 LKELSSNLE 279


>sp|RDRP_TBSVC|RNA-DIRECTED RNA polymerase|Tomato bushy stunt virus (strain

Query: 1 LKELQRNLEE 10
LK++QR L E
Sbjct: 638 LKQIQRTLPE 647




290|SequenceR|1455|1446|SGEKLLKELQ

>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 1 SGEKLLKEL 9
SGE ++KEL
Sbjct: 1028 SGEDVIKEL 1036


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 1 SGEKLLKEL 9
SGE ++KEL
Sbjct: 1028 SGEDVIKEL 1036


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 2 GEKLLKELQ 10
G +LLKEL+
Sbjct: 482 GSELLKELE 490


>sp|YL357_MIMIV|UNCHARACTERIZED protein L357|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 SGEKLLKE 8
SGEK++KE
Sbjct: 220 SGEKVMKE 227




291|SequenceR|1460|1451|VRQNSSGEKL

>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain

Query: 1 VRQNSSGEKL 10
V QNS G KL
Sbjct: 28 VEQNSEGNKL 37


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 2 RQNSSGEKL 10
RQ+SSG K+
Sbjct: 296 RQSSSGHKV 304




292|SequenceR|1465|1456|EIWDFVRQNS

>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 2 IWDFVRQNS 10
+WD +RQ+S
Sbjct: 666 LWDIIRQDS 674


>sp|YL446_MIMIV|UNCHARACTERIZED protein L446|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EIWDFV 6
EIWDF+
Sbjct: 112 EIWDFI 117


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 EIWDFVRQNS 10
E+ DFVR N+
Sbjct: 2431 EVLDFVRMNN 2440


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 EIWDFVRQN 9
E WDF + N
Sbjct: 2122 EYWDFYKTN 2130


>sp|Y038_NPVOP|UNCHARACTERIZED 24.3 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 EIWDFVRQ 8
E +DFVRQ
Sbjct: 168 EFFDFVRQ 175


>sp|YR659_MIMIV|PUTATIVE EGF-like domain-containing protein R659|Acanthamoeba polyphaga

Query: 1 EIWDFVRQNS 10
EIW VRQ +
Sbjct: 484 EIWSNVRQGT 493


>sp|VIF_BIV29|VIRION infectivity factor|Bovine immunodeficiency virus (strain R29)

Query: 3 WDFVRQ 8
W+FVRQ
Sbjct: 44 WEFVRQ 49


>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 EIWDFV 6
++WDFV
Sbjct: 60 DVWDFV 65


>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)

Query: 1 EIWDFVRQ 8
++W+F+R+
Sbjct: 610 QMWNFIRE 617


>sp|YR455_MIMIV|UNCHARACTERIZED protein R455|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 IWDFVRQNS 10
+WDF QN+
Sbjct: 34 VWDFAGQNN 42


>sp|DPOL_ADEB2|DNA polymerase|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus

Query: 1 EIWDFVRQN 9
E++D+VRQ+
Sbjct: 480 EMYDYVRQS 488


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 IWDFVRQN 9
+WD+ R N
Sbjct: 6517 LWDYERSN 6524


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 IWDFVRQN 9
+WD+ R N
Sbjct: 6608 LWDYERSN 6615


>sp|Y043_SFAVA|UNCHARACTERIZED protein ORF43|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 1 EIWDFVRQ 8
++WD+V Q
Sbjct: 158 KLWDYVNQ 165


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 3 WDFVRQNS 10
WD+ +NS
Sbjct: 88 WDYATENS 95




293|SequenceR|1470|1461|ESLNAEIWDF

>sp|ETF2_FOWPN|EARLY transcription factor 82 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 1 ESLNAEIWD 9
ESLN IWD
Sbjct: 225 ESLNLSIWD 233


>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1

Query: 1 ESLNAEIWD 9
E+LN IWD
Sbjct: 223 EALNLSIWD 231


>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41

Query: 1 ESLNAEIW 8
ESL+A++W
Sbjct: 402 ESLDAKVW 409


>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40

Query: 1 ESLNAEIW 8
ESL+A++W
Sbjct: 387 ESLDAKVW 394


>sp|GE_SUHVR|ENVELOPE glycoprotein E|Suid herpesvirus 1 (strain Rice)

Query: 2 SLNAEIWDF 10
S +AE+WD
Sbjct: 40 SPSAEVWDL 48


>sp|TUBE_BPT5|TAIL tube protein pb6|Escherichia phage T5 (Enterobacteria phage

Query: 1 ESLNAEIWDF 10
+SLNA W F
Sbjct: 63 DSLNAAEWSF 72


>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)

Query: 4 NAEIWDF 10
NA++W+F
Sbjct: 146 NAQMWNF 152


>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)

Query: 4 NAEIWDF 10
NA++W+F
Sbjct: 146 NAQMWNF 152


>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 NAEIWDF 10
NA++W+F
Sbjct: 146 NAQMWNF 152


>sp|FUS_NPVCF|MAJOR envelope glycoprotein|Choristoneura fumiferana nuclear polyhedrosis

Query: 3 LNAEIWDF 10
LNA++W F
Sbjct: 473 LNAKLWSF 480




294|SequenceR|1475|1466|SVIQQESLNA

***** No hits found ******


295|SequenceR|1480|1471|RVLTNSVIQQ

>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 3 LTNSVIQQ 10
LTNS+IQ+
Sbjct: 1699 LTNSIIQR 1706


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 3 LTNSVIQQ 10
LTNS+IQ+
Sbjct: 1699 LTNSIIQR 1706




296|SequenceR|1485|1476|ATMLARVLTN

***** No hits found ******


297|SequenceR|1490|1481|ASYCVATMLA

>sp|YL334_MIMIV|UNCHARACTERIZED protein L334|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 YCVATML 9
YC+ TML
Sbjct: 179 YCIFTML 185


>sp|UDPE_NPVLD|ECDYSTEROID UDP-glucosyltransferase|Lymantria dispar multicapsid nuclear

Query: 1 ASYCVATMLA 10
A YC++ +LA
Sbjct: 477 AEYCMSDLLA 486




298|SequenceR|1495|1486|TEFIIASYCV

>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2

Query: 1 TEFIIASYC 9
+E IASYC
Sbjct: 46 SELCIASYC 54


>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1

Query: 2 EFIIASYC 9
E IASYC
Sbjct: 47 ELCIASYC 54




299|SequenceR|1500|1491|DVRLPTEFII

>sp|NCAP_CVCBG|NUCLEOPROTEIN coronavirus (strain BGF10) (CCoV)

Query: 1 DVRLPTEF 8
DV++P+EF
Sbjct: 142 DVKVPSEF 149


>sp|NCAP_CVCAI|NUCLEOPROTEIN coronavirus (strain Insavc-1) (CCoV)

Query: 1 DVRLPTEF 8
DV++P+EF
Sbjct: 142 DVKVPSEF 149


>sp|VP4_ROTRH|OUTER capsid protein VP4|Rotavirus A (strain RVA/Monkey/United

Query: 4 LPTEFII 10
LPT+FII
Sbjct: 333 LPTDFII 339


>sp|YL484_MIMIV|PUTATIVE ankyrin repeat protein L484|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 RLPTEFI 9
R+PTEFI
Sbjct: 756 RIPTEFI 762


>sp|VP4_ROTB5|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTD9|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTF6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTBC|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTRF|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTS4|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-4F/G3P6[1]) (RV-A)

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTAP|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/South/Africa/Offal

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTSF|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-FEM/G3P6[1]) (RV-A)

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTBN|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTEO|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTE1|OUTER capsid protein VP4|Rotavirus A (strain RVA/Equine/United

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROTME|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 333 LPTDFVI 339


>sp|VP4_ROT46|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 LPTEFII 10
LPT+F+I
Sbjct: 335 LPTDFVI 341




300|SequenceR|1505|1496|KLVAVDVRLP

>sp|Y345_AFV2P|UNCHARACTERIZED protein ORF345|Acidianus filamentous virus 2 (isolate

Query: 1 KLVAVDVRLP 10
KL+AVD R P
Sbjct: 281 KLIAVDTRDP 290


>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])

Query: 1 KLVAVDVRLP 10
K+ A+DV LP
Sbjct: 383 KMTAMDVELP 392


>sp|PURZ_BPPMB|N6-SUCCINO-2-AMINO-2'-DEOXYADENYLATE synthase|Salmonella phage PMBT28

Query: 3 VAVDVRLP 10
VAVDV LP
Sbjct: 221 VAVDVNLP 228


>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

Query: 1 KLVAVDVRLP 10
KL A+D+ LP
Sbjct: 383 KLTAMDLELP 392


>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 1 KLVAVDVRLP 10
KL A+D+ LP
Sbjct: 383 KLTAMDLELP 392


>sp|VP3_ROTP5|PROTEIN VP3|Rotavirus A (strain RVA/Pig/United States/OSU/1977/G5P9[7])

Query: 1 KLVAVDVRLP 10
KL A+D+ LP
Sbjct: 383 KLTAMDLELP 392


>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])

Query: 1 KLVAVDVRLP 10
KL A+D+ LP
Sbjct: 383 KLTAMDLELP 392


>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)

Query: 1 KLVAVDVRLP 10
KL A+D+ LP
Sbjct: 383 KLTAMDLELP 392


>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])

Query: 1 KLVAVDVRLP 10
KL A+D+ LP
Sbjct: 383 KLTAMDLELP 392


>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])

Query: 1 KLVAVDVRLP 10
KL A+D+ LP
Sbjct: 383 KLTAMDLELP 392


>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

Query: 1 KLVAVDVRLP 10
KL A+D+ LP
Sbjct: 383 KLTAMDLELP 392


>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])

Query: 1 KLVAVDVRLP 10
KL A+D+ LP
Sbjct: 383 KLTAMDLELP 392


>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])

Query: 1 KLVAVDVRLP 10
KL A+D+ LP
Sbjct: 383 KLTAMDLELP 392


>sp|VP3_ROTEL|PROTEIN VP3|Rotavirus A (isolate RVA/Equine/United

Query: 1 KLVAVDVRLP 10
K+ A+D+ LP
Sbjct: 383 KMTAMDIELP 392


>sp|VP3_ROTCC|PROTEIN VP3|Rotavirus A (strain RVA/Chicken/Ireland/Ch2/1979/G7P[X]) (RV-A)

Query: 1 KLVAVDVRLP 10
K+ A+D+ LP
Sbjct: 380 KITAMDIELP 389




301|SequenceR|1510|1501|LKARAKLVAV

>sp|GI_EHV1D|ENVELOPE glycoprotein I|Equine herpesvirus 1 (strain Kentucky

Query: 1 LKARAKLVAV 10
LKAR K+VA+
Sbjct: 311 LKARNKIVAM 320


>sp|GI_EHV1B|ENVELOPE glycoprotein I|Equine herpesvirus 1 (strain Ab4p)

Query: 1 LKARAKLVAV 10
LKAR K+VA+
Sbjct: 311 LKARNKIVAM 320


>sp|GI_EHV1A|ENVELOPE glycoprotein I|Equine herpesvirus 1 (strain AB1)

Query: 1 LKARAKLVAV 10
LKAR K+VA+
Sbjct: 311 LKARNKIVAM 320




302|SequenceR|1515|1506|LYKQLLKARA

>sp|GLYC_WWAVU|PRE-GLYCOPROTEIN polyprotein GP complex|Whitewater Arroyo mammarenavirus (isolate

Query: 2 YKQLLKAR 9
YKQ++K+R
Sbjct: 236 YKQMIKSR 243




303|SequenceR|1520|1511|KQEDCLYKQL

>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 QEDCLYK 8
QEDCLY+
Sbjct: 142 QEDCLYE 148


>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 QEDCLYK 8
QEDCLY+
Sbjct: 143 QEDCLYE 149


>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 QEDCLYK 8
QEDCLY+
Sbjct: 143 QEDCLYE 149


>sp|CHLE_MIMIV|PROBABLE cholinesterase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 EDCLYKQL 10
EDCLY +
Sbjct: 102 EDCLYTNV 109


>sp|POL1_BBWV2|RNA1 polyprotein|Broad bean wilt virus 2

Query: 3 EDCLY 7
EDCLY
Sbjct: 240 EDCLY 244


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 1 KQEDCLYKQL 10
++ DC+YK L
Sbjct: 1104 ERSDCVYKIL 1113


>sp|PTPH_MIMIV|PUTATIVE tyrosine-protein phosphatase R622|Acanthamoeba polyphaga mimivirus

Query: 4 DCLYKQL 10
+CLYKQ
Sbjct: 99 NCLYKQF 105




304|SequenceR|1525|1516|LAQLEKQEDC

>sp|YR22_TORVR|UNCHARACTERIZED protein in RNA2|Tomato ringspot virus (isolate raspberry)

Query: 4 LEKQEDC 10
LEK+EDC
Sbjct: 97 LEKREDC 103


>sp|VP10_RBSDV|PROTEIN S10|Rice black streaked dwarf virus

Query: 1 LAQLEKQEDC 10
LA+L+K +DC
Sbjct: 471 LAKLDKIDDC 480


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 2 AQLEKQE 8
AQ+EKQE
Sbjct: 1186 AQIEKQE 1192


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 2 AQLEKQE 8
AQ+EKQE
Sbjct: 1186 AQIEKQE 1192


>sp|CP80_BP186|UNCHARACTERIZED 8.5 kDa protein in|Escherichia phage 186 (Bacteriophage 186)

Query: 1 LAQLEKQED 9
LAQL +QED
Sbjct: 7 LAQLREQED 15




305|SequenceR|1530|1521|AQLAYLAQLE

>sp|TMP_LAMBD|TAPE measure protein|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 QLAYLAQLE 10
Q+AY+AQL+
Sbjct: 252 QIAYVAQLQ 260




306|SequenceR|1535|1526|LTVVLAQLAY

***** No hits found ******


307|SequenceR|1540|1531|NPPQELTVVL

***** No hits found ******


308|SequenceR|1545|1536|FMRLLNPPQE

>sp|RASH_RRASV|TRANSFORMING protein p29|Rasheed rat sarcoma virus

Query: 2 MRLLNPPQE 10
+R LNPP E
Sbjct: 227 LRKLNPPDE 235


>sp|RASH_MSVNS|GTPASE HRas|Murine sarcoma virus NS.C58

Query: 2 MRLLNPPQE 10
+R LNPP E
Sbjct: 168 LRKLNPPDE 176


>sp|RASH_MSVMO|GTPASE HRas|Moloney murine sarcoma virus (MoMSV)

Query: 2 MRLLNPPQE 10
+R LNPP E
Sbjct: 168 LRKLNPPDE 176


>sp|GG_SUHVR|ENVELOPE glycoprotein G|Suid herpesvirus 1 (strain Rice)

Query: 2 MRLLNPP 8
MRLL+PP
Sbjct: 68 MRLLDPP 74


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 FMRLLNPP 8
F LLNPP
Sbjct: 213 FKHLLNPP 220


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 FMRLLNPPQE 10
F LL+PP E
Sbjct: 208 FKHLLHPPSE 217


>sp|RASH_MSVHA|TRANSFORMING protein p29|Harvey murine sarcoma virus

Query: 2 MRLLNPPQE 10
+R LNPP E
Sbjct: 220 LRKLNPPDE 228


>sp|VP8_HAPV1|VIRION protein 8|Halorubrum pleomorphic virus 1 (HRPV-1)

Query: 3 RLLNPPQ 9
R+LNPP+
Sbjct: 10 RILNPPK 16


>sp|RIR2_VACCW|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Western Reserve)

Query: 1 FMRLLNPPQE 10
F LL+PP E
Sbjct: 208 FKHLLHPPSE 217


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 FMRLLNPPQE 10
F LL+PP E
Sbjct: 208 FKHLLHPPSE 217


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 FMRLLNPPQE 10
F LL+PP E
Sbjct: 208 FKHLLHPPSE 217


>sp|YR569_MIMIV|UNCHARACTERIZED exonuclease R569|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FMRLLNPPQ 9
F +LLNP Q
Sbjct: 253 FYKLLNPQQ 261


>sp|CAP9_ADE40|HEXON-INTERLACING protein IX|Human adenovirus F serotype 40

Query: 2 MRLLNPP 8
M LLNPP
Sbjct: 122 MALLNPP 128


>sp|CAPSD_RRSVT|INNER capsid protein VP3|Rice ragged stunt virus (isolate

Query: 1 FMRLLNPPQE 10
F R+L+P QE
Sbjct: 389 FGRMLSPQQE 398




309|SequenceR|1550|1541|YLADFFMRLL

>sp|YL690_MIMIV|UNCHARACTERIZED protein L690|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YLADFFMR 8
YLADFF R
Sbjct: 188 YLADFFQR 195


>sp|YR648_MIMIV|UNCHARACTERIZED protein R648|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YLADFF 6
YLADFF
Sbjct: 214 YLADFF 219


>sp|Y05F_BPT4|UNCHARACTERIZED 36.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 YLADFFM 7
YLADF M
Sbjct: 300 YLADFIM 306


>sp|RDRP_AQRVA|RNA-DIRECTED RNA polymerase VP2|Aquareovirus A (isolate Chum

Query: 2 LADFFMR 8
+ADFF+R
Sbjct: 670 MADFFLR 676




310|SequenceR|1555|1546|VVDEDYLADF

>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 VVDEDYLADF 10
V DEDY+ DF
Sbjct: 179 VPDEDYVVDF 188


>sp|PG047_VACCW|IMMUNE evasion protein OPG047|Vaccinia virus (strain Western Reserve)

Query: 1 VVDEDYLADF 10
V DEDY+ DF
Sbjct: 179 VPDEDYVVDF 188


>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)

Query: 1 VVDEDYLADF 10
V DEDY+ DF
Sbjct: 179 VPDEDYVVDF 188


>sp|RDRP_RDVF|RNA-DIRECTED RNA polymerase P1|Rice dwarf virus (isolate Fujian)

Query: 2 VDEDYLADF 10
+DED LADF
Sbjct: 1364 IDEDKLADF 1372


>sp|RDRP_RDVA|RNA-DIRECTED RNA polymerase P1|Rice dwarf virus (isolate Akita)

Query: 2 VDEDYLADF 10
+DED LADF
Sbjct: 1364 IDEDKLADF 1372


>sp|POL2_BRSV|RNA2 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 2 VDEDYLADF 10
V ED LADF
Sbjct: 293 VSEDTLADF 301


>sp|PRO_SRV2|GAG-PRO polyprotein|Simian retrovirus SRV-2

Query: 1 VVDEDYLADF 10
V+D DY +F
Sbjct: 697 VIDNDYTGEF 706


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 1 VVDEDYLADF 10
V+D DY +F
Sbjct: 697 VIDNDYTGEF 706


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 1 VVDEDY 6
VVDEDY
Sbjct: 2697 VVDEDY 2702


>sp|VMF7_MYXVU|MF7 protein|Myxoma virus (strain Uriarra) (MYXV)

Query: 2 VDEDYLADF 10
VD+ YLADF
Sbjct: 100 VDKGYLADF 108


>sp|VMF7_MYXVL|MF7 protein|Myxoma virus (strain Lausanne) (MYXV)

Query: 2 VDEDYLADF 10
VD+ YLADF
Sbjct: 100 VDKGYLADF 108


>sp|U23_HHV6Z|PROTEIN U23|Human herpesvirus 6B (strain Z29)

Query: 3 DEDYLADF 10
DE+Y DF
Sbjct: 236 DEEYFKDF 243


>sp|YR831_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R831|Acanthamoeba polyphaga

Query: 1 VVDEDYLAD 9
++D DY+AD
Sbjct: 1333 IIDIDYMAD 1341


>sp|DUT_VACCW|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain

Query: 1 VVDEDY 6
V+DEDY
Sbjct: 83 VIDEDY 88


>sp|DUT_VACCP|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain L-IVP)

Query: 1 VVDEDY 6
V+DEDY
Sbjct: 83 VIDEDY 88


>sp|DUT_VACCC|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain

Query: 1 VVDEDY 6
V+DEDY
Sbjct: 83 VIDEDY 88


>sp|DUT_VACCA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain

Query: 1 VVDEDY 6
V+DEDY
Sbjct: 83 VIDEDY 88


>sp|DUT_ORFN2|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Orf virus (strain NZ2) (OV

Query: 1 VVDEDY 6
V+DEDY
Sbjct: 83 VIDEDY 88


>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /

Query: 1 VVDEDY 6
V+DEDY
Sbjct: 83 VIDEDY 88


>sp|DUT_CAMPS|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Camelpox virus (strain CMS)

Query: 1 VVDEDY 6
V+DEDY
Sbjct: 83 VIDEDY 88


>sp|DUT_CAMPM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Camelpox virus (strain M-96)

Query: 1 VVDEDY 6
V+DEDY
Sbjct: 83 VIDEDY 88


>sp|NS7A_BCHK9|NON-STRUCTURAL protein 7a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 VVDEDY 6
VVDEDY
Sbjct: 180 VVDEDY 185


>sp|VP5_AQRVG|MICROTUBULE-ASSOCIATED protein VP5|Aquareovirus G (isolate American grass

Query: 1 VVDEDYLAD 9
+VD D+L D
Sbjct: 436 IVDSDHLGD 444


>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)

Query: 1 VVDEDY 6
V+DEDY
Sbjct: 87 VIDEDY 92


>sp|DUT_RABPU|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Rabbitpox virus (strain

Query: 1 VVDEDY 6
V+DEDY
Sbjct: 83 VIDEDY 88


>sp|YR727_MIMIV|UNCHARACTERIZED protein R727|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 VDEDYLADF 10
V ++YLAD+
Sbjct: 197 VTDEYLADY 205


>sp|DUT_VARV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus

Query: 1 VVDEDY 6
V+DEDY
Sbjct: 83 VIDEDY 88


>sp|DUT_VAR67|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus (isolate

Query: 1 VVDEDY 6
V+DEDY
Sbjct: 83 VIDEDY 88


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 VVDEDYLADF 10
V +DYL DF
Sbjct: 2358 VAFQDYLRDF 2367


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1 VVDEDYLADF 10
V +DYL DF
Sbjct: 2331 VAFQDYLRDF 2340


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1 VVDEDYLADF 10
V +DYL DF
Sbjct: 2336 VAFQDYLRDF 2345


>sp|GL_HHV7J|ENVELOPE glycoprotein L|Human herpesvirus 7 (strain JI)

Query: 1 VVDEDYLADF 10
++DED+L F
Sbjct: 80 LIDEDFLETF 89


>sp|Y06C_BPT4|UNCHARACTERIZED 8.5 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 VDEDYLADF 10
VD+DY+ F
Sbjct: 37 VDKDYIGTF 45


>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 DEDYLADF 10
DE+Y DF
Sbjct: 173 DEEYFKDF 180


>sp|Y8K6_BPP22|UNCHARACTERIZED 8.6 kDa protein in|Salmonella phage P22 (Bacteriophage P22)

Query: 2 VDEDYLAD 9
VDEDY+ D
Sbjct: 9 VDEDYIVD 16




311|SequenceR|1560|1551|FADEKVVDED

>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 FADEKVVD 8
F DEK+VD
Sbjct: 923 FEDEKLVD 930


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1 FADEKVVD 8
F DEK+VD
Sbjct: 923 FEDEKLVD 930


>sp|PKG2_ADEB3|PACKAGING protein 2|Bovine adenovirus B serotype 3

Query: 1 FADEKVVDED 10
F DE V +ED
Sbjct: 77 FTDEDVEEED 86


>sp|CAP3_ADECR|PRE-HEXON-LINKING protein IIIa|Canine adenovirus serotype 1 (strain

Query: 1 FADEKVVDED 10
F +EK +D+D
Sbjct: 438 FLEEKFIDDD 447


>sp|CAP3_ADECC|PRE-HEXON-LINKING protein IIIa|Canine adenovirus serotype 1 (strain

Query: 1 FADEKVVDED 10
F +EK +D+D
Sbjct: 438 FLEEKFIDDD 447




312|SequenceR|1565|1556|SEWSYFADEK

>sp|ORF4B_BCHK4|NON-STRUCTURAL protein ORF4b|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 SEWSYFADEK 10
SEW +F D K
Sbjct: 175 SEWPFFTDVK 184


>sp|P22_ASFM2|INNER membrane protein p22|African swine fever virus (isolate

Query: 3 WSYFADEK 10
W YF DEK
Sbjct: 132 WEYFGDEK 139


>sp|VG75_EHV2|PROBABLE membrane antigen 75|Equine herpesvirus 2 (strain 86/87)

Query: 1 SEWSYFADEK 10
+ W+ FADE+
Sbjct: 1003 NSWTSFADEQ 1012


>sp|P22_ASFK5|INNER membrane protein p22|African swine fever virus (isolate

Query: 3 WSYFADEK 10
W YF DEK
Sbjct: 136 WEYFGDEK 143


>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 1 SEWSYFADEK 10
S W+YF D K
Sbjct: 1735 STWNYFVDLK 1744


>sp|YR738_MIMIV|PUTATIVE BTB/POZ domain-containing protein R738|Acanthamoeba polyphaga

Query: 2 EWSYFA 7
EWSYFA
Sbjct: 340 EWSYFA 345


>sp|SUNS_BPSPB|GLYCOSYLTRANSFERASE SunS|Bacillus phage SPbeta (Bacillus phage

Query: 1 SEWSYFAD 8
SEW YF D
Sbjct: 129 SEWIYFID 136


>sp|DPOL2_BPK32|DEPOLYMERASE 2, capsule K21-specific|Klebsiella phage KP32 (Bacteriophage KP32)

Query: 1 SEWSYF 6
++WSYF
Sbjct: 143 TQWSYF 148


>sp|POL_FIVPE|POL polyprotein|Feline immunodeficiency virus (isolate Petaluma)

Query: 1 SEWSYFADEK 10
++W Y+ D+K
Sbjct: 1066 AQWIYYKDQK 1075


>sp|POL_FIVSD|POL polyprotein|Feline immunodeficiency virus (strain San

Query: 1 SEWSYFADEK 10
++W Y+ D+K
Sbjct: 1066 AQWIYYKDQK 1075


>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)

Query: 2 EWSYFAD 8
EW++F+D
Sbjct: 218 EWNFFSD 224


>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)

Query: 2 EWSYFAD 8
EW++F+D
Sbjct: 218 EWNFFSD 224


>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 EWSYFAD 8
EW++F+D
Sbjct: 218 EWNFFSD 224


>sp|POL_FIVT2|POL polyprotein|Feline immunodeficiency virus (isolate TM2)

Query: 2 EWSYFADEK 10
+W Y+ D+K
Sbjct: 1067 QWLYYKDQK 1075


>sp|VG58_SHV21|GENE 58 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 EWSYFAD 8
EWSY+ +
Sbjct: 71 EWSYYIE 77


>sp|EXLYS_BPP22|HEAD-TO-TAIL adapter gp4|Salmonella phage P22 (Bacteriophage P22)

Query: 1 SEWSYFADEK 10
+EW YF E+
Sbjct: 144 NEWHYFPGEQ 153


>sp|CAPSH_ADES1|HEXON protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 SEWSYFA 7
S W YFA
Sbjct: 326 SRWHYFA 332


>sp|TSP_BPT4|TAIL sheath protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 WSYFADEK 10
W +FAD +
Sbjct: 359 WDFFADRE 366


>sp|P22_ASFB7|INNER membrane protein p22|African swine fever virus (strain

Query: 3 WSYFADEK 10
W Y DEK
Sbjct: 138 WEYVGDEK 145




313|SequenceR|1570|1561|APDKSSEWSY

>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)

Query: 2 PDKSSEWSY 10
PD +S+WSY
Sbjct: 108 PDDTSDWSY 116


>sp|DPOZ_BPSHA|DNA polymerase DpoZ|Acinetobacter phage SH-Ab 15497

Query: 2 PDKSSEWSY 10
PD+ +WSY
Sbjct: 373 PDRGQKWSY 381


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 5 SSEWSY 10
SSEW+Y
Sbjct: 3547 SSEWAY 3552


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 5 SSEWSY 10
SSEW+Y
Sbjct: 3547 SSEWAY 3552


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 PDKSSEW 8
PD SSEW
Sbjct: 192 PDLSSEW 198


>sp|DPOZ_BPPMB|DNA polymerase DpoZ|Salmonella phage PMBT28

Query: 2 PDKSSEWSY 10
PD+ +W+Y
Sbjct: 372 PDEGQQWTY 380


>sp|REP_BPI22|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage I2-2 (Bacteriophage I2-2)

Query: 1 APDKSSEW 8
APD S EW
Sbjct: 25 APDGSVEW 32


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 PDKSSEW 8
PD SSEW
Sbjct: 192 PDLSSEW 198


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 PDKSSEW 8
PD SSEW
Sbjct: 192 PDLSSEW 198


>sp|YR355_MIMIV|PUTATIVE thiol protease R355|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 APDKSSEW 8
P KS+EW
Sbjct: 106 GPSKSTEW 113


>sp|POL_AVIRE|GAG-POL polyprotein|Avian reticuloendotheliosis virus

Query: 1 APDKSSEWS 9
APD EW+
Sbjct: 1126 APDNQEEWT 1134


>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)

Query: 3 DKSSEWSY 10
D SSEW Y
Sbjct: 275 DMSSEWVY 282


>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 APDKSSEWSY 10
AP+ WSY
Sbjct: 67 APEHVHRWSY 76


>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 APDKSSEWSY 10
AP+ WSY
Sbjct: 67 APEHVHRWSY 76


>sp|HFT_BPCA1|HEAD fiber trimeric protein|Bacteroides phage crAss001 (Bacteroides

Query: 1 APDKSSEWSY 10
APD +S W Y
Sbjct: 13 APDINSVWLY 22




314|SequenceR|1575|1566|KGQQEAPDKS

>sp|VP9_MYRV9|UNCHARACTERIZED protein VP9|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 1 KGQQEAPDK 9
KGQ APD+
Sbjct: 20 KGQNGAPDE 28




315|SequenceR|1580|1571|KLAVGKGQQE

>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus

Query: 2 LAVGKGQQ 9
L VGKGQ+
Sbjct: 11 LQVGKGQE 18


>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate

Query: 2 LAVGKGQQ 9
L VGKGQ+
Sbjct: 11 LQVGKGQE 18


>sp|ETF2_VACCW|EARLY transcription factor 82 kDa|Vaccinia virus (strain Western

Query: 2 LAVGKGQQ 9
L VGKGQ+
Sbjct: 11 LQVGKGQE 18


>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)

Query: 2 LAVGKGQQ 9
L VGKGQ+
Sbjct: 11 LQVGKGQE 18


>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)

Query: 2 LAVGKGQQ 9
L VGKGQ+
Sbjct: 11 LQVGKGQE 18


>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2 LAVGKGQQ 9
L VGKGQ+
Sbjct: 11 LQVGKGQE 18


>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)

Query: 2 LAVGKGQQ 9
L VGKGQ+
Sbjct: 11 LQVGKGQE 18




316|SequenceR|1585|1576|FATVSKLAVG

***** No hits found ******


317|SequenceR|1590|1581|RLWKFFATVS

>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 2 LWKFFATV 9
LW+FF+T+
Sbjct: 1969 LWQFFSTI 1976


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 2 LWKFFATV 9
LW+FF+T+
Sbjct: 1969 LWQFFSTI 1976


>sp|VP7_APRVF|UNCHARACTERIZED protein VP7|Aedes pseudoscutellaris reovirus (isolate France)

Query: 2 LWKFFATVS 10
WKFF +++
Sbjct: 113 FWKFFTSIN 121


>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1

Query: 1 RLWKFF 6
RLW+FF
Sbjct: 599 RLWEFF 604


>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 3 WKFFATVS 10
WKFF T +
Sbjct: 137 WKFFETFT 144


>sp|Y494R_PBCV1|PUTATIVE transcription factor A494R|Paramecium bursaria Chlorella virus 1

Query: 3 WKFFATV 9
W+F ATV
Sbjct: 354 WEFIATV 360


>sp|Y072_OSHVF|UNCHARACTERIZED protein ORF72|Ostreid herpesvirus 1 (isolate France)

Query: 3 WKFFAT 8
WK+F+T
Sbjct: 156 WKYFST 161




318|SequenceR|1599|1586|NHDSEEEAERLWKF

>sp|NS1A_MASV1|NON-STRUCTURAL polyprotein 1A|Mink astrovirus 1 (MAstV-1)

Query: 1 NHDSEEEAERLW 12
+HDS+EE +R W
Sbjct: 738 DHDSDEEIDRDW 749


>sp|NS1AB_MASV1|NON-STRUCTURAL polyprotein 1AB|Mink astrovirus 1 (MAstV-1)

Query: 1 NHDSEEEAERLW 12
+HDS+EE +R W
Sbjct: 738 DHDSDEEIDRDW 749


>sp|NCAP_SYNV|NUCLEOPROTEIN yellow net virus (SYNV)

Query: 3 DSEEEAERLWKF 14
D+ AERLWK+
Sbjct: 315 DNGHNAERLWKY 326


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 3 DSEEEAERLWKF 14
DS+EE ERL F
Sbjct: 1037 DSKEEDERLAAF 1048


>sp|POLA_CHPVE|POLYPROTEIN p69|Cryphonectria hypovirus 1 (strain EP713)

Query: 3 DSEEEAERLW 12
D+E E RLW
Sbjct: 320 DTEAECRRLW 329


>sp|POLA_CHPVU|POLYPROTEIN p69|Cryphonectria hypovirus 1 (strain Euro7)

Query: 3 DSEEEAERLW 12
D+E E RLW
Sbjct: 320 DTEAECRRLW 329


>sp|YL207_MIMIV|PUTATIVE helicase L207/L206|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 EEEAERLWK 13
+EE ERLW+
Sbjct: 413 KEECERLWR 421


>sp|RPO5_FOWPN|DNA-DIRECTED RNA polymerase 30 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 3 DSEEEAERLWKF 14
+SEEEA++L K+
Sbjct: 12 NSEEEAQKLLKW 23


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 3 DSEEEAERL 11
DS+ EAERL
Sbjct: 2157 DSDLEAERL 2165


>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 4 SEEEAERL 11
SEEEAERL
Sbjct: 155 SEEEAERL 162


>sp|VF124_ASFM2|UNCHARACTERIZED protein H124R|African swine fever virus (isolate

Query: 4 SEEEAERLW 12
SEEE E+ W
Sbjct: 98 SEEELEQYW 106


>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)

Query: 1 NHDSEEEAERLW 12
+ DSE+E LW
Sbjct: 159 DSDSEDEHRDLW 170


>sp|VF184_IIV6|PUTATIVE helicase 184R|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 DSEEEAERLWK 13
D EEEA WK
Sbjct: 343 DCEEEALEAWK 353


>sp|YL191_MIMIV|UNCHARACTERIZED protein L191|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 HDSEEEAERLWKF 14
H++ E ++W+F
Sbjct: 243 HEASNEVRKVWEF 255


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 4 SEEEAERLWK 13
+EE+ R+W+
Sbjct: 1400 TEEQLHRIWR 1409


>sp|V143_NPVOP|ATP-DEPENDENT DNA helicase P143|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 HDSEEEA 8
HD EEEA
Sbjct: 72 HDDEEEA 78


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 4 SEEEAERLWK 13
+EE+ R+W+
Sbjct: 1399 TEEQLHRIWR 1408


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 4 SEEEAERLWK 13
+EE+ R+W+
Sbjct: 1398 TEEQLHRIWR 1407


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 4 SEEEAERLWK 13
+EE+ R+W+
Sbjct: 1419 TEEQLHRIWR 1428


>sp|ST_POVK6|SMALL t antigen|KI polyomavirus (isolate Stockholm 60)

Query: 2 HDSEEEAERLWK 13
HD EE + +W+
Sbjct: 70 HDLNEEEDNIWQ 81


>sp|ST_POVK3|SMALL t antigen|KI polyomavirus (isolate Stockholm 380)

Query: 2 HDSEEEAERLWK 13
HD EE + +W+
Sbjct: 70 HDLNEEEDNIWQ 81


>sp|FIBER_BPK1F|TAIL spike protein|Escherichia phage K1F (Bacteriophage K1F)

Query: 3 DSEEEAERL 11
DSE+EA R+
Sbjct: 131 DSEDEARRI 139


>sp|ST_POVKI|SMALL t antigen|KI polyomavirus (isolate Stockholm 350)

Query: 2 HDSEEEAERLWK 13
HD EE + +W+
Sbjct: 70 HDLNEEEDNIWQ 81


>sp|RDRP_FHV|RNA-DIRECTED RNA polymerase|Flock house virus (FHV)

Query: 2 HDSEEEA 8
HDSEE A
Sbjct: 870 HDSEESA 876


>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 2 HDSEEEAERLWKF 14
HD E LW+F
Sbjct: 202 HDDEHGETLLWRF 214


>sp|RDRP_BBV|RNA-DIRECTED RNA polymerase|Black beetle virus (BBV)

Query: 2 HDSEEEA 8
HDSEE A
Sbjct: 870 HDSEESA 876




THE END