IF4G1_HUMAN Blast Output
Archaea
1|Sequence|1|10|MNKAPQSTGP

***** No hits found ******


2|Sequence|6|15|QSTGPPPAPS

>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QSTGPPPAPS 10
Q TG PPAP+
Sbjct: 432 QLTGIPPAPA 441


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 STGPPPAPS 10
S GP PAPS
Sbjct: 518 SPGPLPAPS 526


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 3 TGPPPAPS 10
TG PPAP+
Sbjct: 433 TGIPPAPA 440


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 3 TGPPPAPS 10
TG PPAP+
Sbjct: 433 TGIPPAPA 440


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 QSTGPPPAPS 10
Q +G PPAP+
Sbjct: 432 QLSGIPPAPA 441


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QSTGPPPAPS 10
Q G PPAP+
Sbjct: 432 QLAGIPPAPA 441


>sp|RL10_METVS|LARGE ribosomal subunit protein uL10|Methanococcus vannielii (strain ATCC

Query: 2 STGPPPAP 9
STG PP P
Sbjct: 133 STGMPPGP 140


>sp|RL10_META3|LARGE ribosomal subunit protein uL10|Methanococcus aeolicus (strain ATCC

Query: 2 STGPPPAP 9
STG PP P
Sbjct: 132 STGMPPGP 139


>sp|RL10_METTL|LARGE ribosomal subunit protein uL10|Methanothermococcus

Query: 2 STGPPPAP 9
STG PP P
Sbjct: 133 STGMPPGP 140


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 3 TGPPPAPS 10
+G PPAP+
Sbjct: 434 SGIPPAPA 441


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 QSTGPPPA 8
++ GPPPA
Sbjct: 3 EALGPPPA 10


>sp|RL10_METMP|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain

Query: 2 STGPPPAP 9
STG PP P
Sbjct: 133 STGMPPGP 140


>sp|RL10_METVO|LARGE ribosomal subunit protein uL10|Methanococcus voltae

Query: 2 STGPPPAP 9
STG PP P
Sbjct: 133 STGMPPGP 140


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 3 TGPPPAPS 10
+G PPAP+
Sbjct: 433 SGIPPAPA 440


>sp|RL10_METM6|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C6

Query: 2 STGPPPAP 9
STG PP P
Sbjct: 133 STGMPPGP 140


>sp|RL10_METM7|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C7

Query: 2 STGPPPAP 9
STG PP P
Sbjct: 133 STGMPPGP 140


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 4 GPPPAP 9
G PPAP
Sbjct: 61 GDPPAP 66


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 5 PPPAPS 10
PPP PS
Sbjct: 43 PPPYPS 48


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 5 PPPAPS 10
PPP PS
Sbjct: 43 PPPYPS 48


>sp|RL10_METM5|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C5

Query: 2 STGPPPAP 9
STG PP P
Sbjct: 133 STGMPPGP 140


>sp|KORA_ARCFU|2-OXOGLUTARATE synthase subunit KorA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 STGPPPAPS 10
STG P APS
Sbjct: 110 STGIPTAPS 118


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 5 PPPAPS 10
PPP PS
Sbjct: 50 PPPYPS 55


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GPPPAP 9
G PPAP
Sbjct: 373 GKPPAP 378


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 STGPPPAPS 10
STG P PS
Sbjct: 292 STGVPDVPS 300




3|Sequence|11|20|PPAPSPGLPQ

>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPAPSPGLPQ 10
PPAP GLP
Sbjct: 219 PPAPKEGLPH 228


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 PAPSPGLPQ 10
P P GLPQ
Sbjct: 872 PVPFEGLPQ 880


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPAPSPGL 8
PP P PGL
Sbjct: 523 PPLPLPGL 530


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 1 PPAPSPGLPQ 10
P P P LP+
Sbjct: 426 PAEPQPKLPE 435


>sp|MRE11_METKA|DNA double-strand break repair protein|Methanopyrus kandleri (strain

Query: 2 PAPSPGLPQ 10
PAP PG P+
Sbjct: 212 PAPYPGSPE 220


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PAPSPGLPQ 10
P P+PG+P+
Sbjct: 27 PEPAPGVPK 35


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 APSPGLP 9
+P+PG+P
Sbjct: 227 SPTPGIP 233


>sp|HMDY_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 2 PAPSPGLPQ 10
PA PG PQ
Sbjct: 156 PAAVPGTPQ 164


>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PPAPSPGL 8
PPA PG+
Sbjct: 282 PPAVDPGV 289


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PAPSPGLPQ 10
P+P PG P+
Sbjct: 27 PSPQPGRPK 35


>sp|RS4E_THEAC|SMALL ribosomal subunit protein eS4|Thermoplasma acidophilum (strain

Query: 2 PAPSPGL 8
P P+PG+
Sbjct: 25 PTPNPGM 31


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 PPAPSPGLPQ 10
PPA PG P
Sbjct: 368 PPALCPGCPH 377


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PPAPSPG 7
PPAP P
Sbjct: 259 PPAPDPA 265


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPAPSPGLP 9
PP P+ LP
Sbjct: 19 PPPPARSLP 27




4|Sequence|16|25|PGLPQPAFPP

>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GLPQPAFPP 10
G+P+P PP
Sbjct: 261 GMPEPDIPP 269


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 GLPQPAFPP 10
GLPQP P
Sbjct: 877 GLPQPVLIP 885


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGLPQPAFPP 10
PG P PP
Sbjct: 722 PGYPNRGLPP 731


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 4 PQPAFP 9
PQPA P
Sbjct: 328 PQPAIP 333


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 4 PQPAFP 9
PQP FP
Sbjct: 331 PQPVFP 336


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGLPQPAFPP 10
PG P P PP
Sbjct: 113 PGHPLPWEPP 122


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGLPQPAF 8
PG P P F
Sbjct: 510 PGRPSPPF 517


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PGLPQPAF 8
PG P P F
Sbjct: 510 PGRPSPPF 517


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGLPQPAF 8
PG P P F
Sbjct: 510 PGRPSPPF 517


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGLPQPAF 8
PG P P F
Sbjct: 510 PGRPSPPF 517


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 PGLPQPAF 8
P +PQP F
Sbjct: 456 PAIPQPEF 463


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGLPQPAFPP 10
P LP+P PP
Sbjct: 30 PDLPEPLSPP 39


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 1 PGLPQPAFPP 10
P LP+P PP
Sbjct: 19 PDLPEPLAPP 28


>sp|RL10E_METS5|LARGE ribosomal subunit protein uL16|Metallosphaera sedula (strain ATCC

Query: 1 PGLPQP 6
PG+PQP
Sbjct: 24 PGVPQP 29


>sp|RL10E_SACS2|LARGE ribosomal subunit protein uL16|Saccharolobus solfataricus (strain

Query: 1 PGLPQP 6
PG+PQP
Sbjct: 24 PGIPQP 29


>sp|PUR7_NITMS|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 LPQPAFPP 10
LP+P F P
Sbjct: 117 LPEPIFDP 124


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 1 PGLPQPAFPP 10
P LP+P PP
Sbjct: 19 PDLPEPLAPP 28


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 PGLPQPAF 8
P +PQP F
Sbjct: 459 PAIPQPEF 466


>sp|PYRDB_METMA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina mazei (strain

Query: 2 GLPQPAFP 9
GLP P++P
Sbjct: 82 GLPNPSYP 89


>sp|PYRDB_METAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina acetivorans

Query: 2 GLPQPAFP 9
GLP P++P
Sbjct: 79 GLPNPSYP 86


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PGLPQPAFPP 10
P LP+P PP
Sbjct: 19 PDLPEPLAPP 28


>sp|RL10E_SACI7|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 PGLPQP 6
PG+PQP
Sbjct: 24 PGIPQP 29


>sp|RL10E_SACI6|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 PGLPQP 6
PG+PQP
Sbjct: 24 PGIPQP 29


>sp|RL10E_SACI4|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 PGLPQP 6
PG+PQP
Sbjct: 24 PGIPQP 29


>sp|RL10E_SACI3|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 PGLPQP 6
PG+PQP
Sbjct: 24 PGIPQP 29


>sp|RL10E_SACI2|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 PGLPQP 6
PG+PQP
Sbjct: 24 PGIPQP 29


>sp|RL10E_SACI1|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 PGLPQP 6
PG+PQP
Sbjct: 24 PGIPQP 29


>sp|TRPB2_PYRFU|TRYPTOPHAN synthase beta chain 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGLPQPAFPP 10
P LP+P PP
Sbjct: 19 PDLPEPLAPP 28


>sp|SLAB_ACIAM|S-LAYER protein B|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 PGLPQPAF 8
PG P+P +
Sbjct: 256 PGTPEPVY 263


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PGLPQPAF 8
PG P P F
Sbjct: 514 PGRPSPPF 521


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 3 LPQPAFPP 10
LP+P PP
Sbjct: 530 LPEPEKPP 537


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PGLPQPAF 8
PGL +P F
Sbjct: 231 PGLGEPVF 238


>sp|ACDD_METTH|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanothermobacter

Query: 1 PGLPQP 6
PGLP+P
Sbjct: 116 PGLPRP 121




5|Sequence|21|30|PAFPPGQTAP

>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AFPPGQTA 9
AFPPG A
Sbjct: 845 AFPPGHEA 852


>sp|PDAD_METKA|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 PAFPPGQTAP 10
P FPPG P
Sbjct: 54 PEFPPGSIVP 63


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AFPPGQTA 9
AFPPG A
Sbjct: 746 AFPPGHEA 753


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 2 AFPPGQTA 9
AFPPG A
Sbjct: 791 AFPPGHEA 798


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 1 PAFPPGQTA 9
PAF PG+ A
Sbjct: 509 PAFIPGRCA 517


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PAFPPGQTA 9
PAF PG+ A
Sbjct: 509 PAFIPGRCA 517


>sp|SPEB_METJA|AGMATINASE jannaschii (strain ATCC 43067

Query: 1 PAFPPGQTAP 10
PA+ PG P
Sbjct: 217 PAYAPGTGTP 226


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PAFPPGQTA 9
PAF PG+ A
Sbjct: 509 PAFIPGRCA 517


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 PAFPPGQTA 9
PAF PG+ A
Sbjct: 509 PAFIPGRCA 517


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 AFPPGQ 7
AFPPG
Sbjct: 352 AFPPGH 357


>sp|Y374_METJA|UNCHARACTERIZED protein MJ0374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PAFPPGQT 8
P+FP G T
Sbjct: 255 PSFPSGHT 262


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AFPPGQT 8
AFPPG++
Sbjct: 359 AFPPGRS 365


>sp|MCRG_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PAFPPGQT 8
P F PGQT
Sbjct: 5 PQFYPGQT 12


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 2 AFPPGQ 7
AFPPG
Sbjct: 357 AFPPGH 362


>sp|MCRZ_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 PAFPPGQT 8
P F PG+T
Sbjct: 5 PQFNPGET 12


>sp|FWDB_METMP|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 1 PAFPPGQTA 9
P + PG+TA
Sbjct: 320 PRYNPGETA 328




6|Sequence|26|35|GQTAPVVFST

>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GQTAPVVFST 10
G+ AP VF++
Sbjct: 169 GRNAPAVFTS 178


>sp|DHE4_PYRCJ|NADP(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GQTAPVVFST 10
G+ AP VF++
Sbjct: 166 GRNAPAVFTS 175


>sp|PSTA_METJA|PROBABLE phosphate transport system permease|Methanocaldococcus jannaschii

Query: 1 GQTAPVVFS 9
G+TAP++F+
Sbjct: 207 GETAPLLFT 215




7|Sequence|31|40|VVFSTPQATQ

>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 FSTPQATQ 10
FSTPQA Q
Sbjct: 363 FSTPQAAQ 370


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 FSTPQATQ 10
FSTPQA Q
Sbjct: 365 FSTPQAAQ 372


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 FSTPQATQ 10
FSTP+A Q
Sbjct: 363 FSTPEAVQ 370


>sp|PSLS_METJA|PHOSPHOSULFOLACTATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVFSTPQATQ 10
V+F PQ +Q
Sbjct: 202 VIFEAPQKSQ 211




8|Sequence|36|45|PQATQMNTPS

>sp|Y1254_METJA|UNCHARACTERIZED protein MJ1254|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PQATQMNTPS 10
PQ T + TPS
Sbjct: 190 PQGTLLVTPS 199


>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 2 QATQMNTP 9
+AT++NTP
Sbjct: 152 RATEINTP 159




9|Sequence|41|50|MNTPSQPRQH

>sp|CYNS_SULTO|CYANATE hydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MNTPSQP 7
M TP+QP
Sbjct: 73 MRTPAQP 79


>sp|QUEC_METKA|7-CYANO-7-DEAZAGUANINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 PSQPRQH 10
PS+PR H
Sbjct: 156 PSRPRLH 162


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 4 PSQPRQH 10
PS+PR+H
Sbjct: 394 PSRPRKH 400


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 MNTPSQPR 8
MNTP Q R
Sbjct: 15 MNTPEQIR 22




10|Sequence|46|55|QPRQHFYPSR

>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PRQHFYPSR 10
P++ FYP+R
Sbjct: 243 PQKKFYPAR 251


>sp|NADA_PYRAB|QUINOLINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 PRQHFYPSR 10
P + FYP+R
Sbjct: 243 PEKKFYPAR 251


>sp|NADA_THEKO|QUINOLINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PRQHFYPSR 10
P + FYP+R
Sbjct: 246 PSKKFYPAR 254


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QPRQHFYPS 9
+P HFYP+
Sbjct: 63 KPLFHFYPT 71


>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC

Query: 2 PRQHFYPSR 10
PRQ YP++
Sbjct: 46 PRQILYPAK 54


>sp|RLME_METMJ|RIBOSOMAL RNA large subunit methyltransferase|Methanoculleus marisnigri

Query: 1 QPRQHFYPSR 10
+ R+HFY R
Sbjct: 162 ETRKHFYSVR 171


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PRQHFYPSR 10
P+++ YP R
Sbjct: 437 PKEYIYPRR 445




11|Sequence|51|60|FYPSRAQPPS

>sp|RTCA_THEON|RNA 3'-terminal phosphate cyclase|Thermococcus onnurineus (strain

Query: 1 FYPSRAQP 8
FYP RA+P
Sbjct: 77 FYPGRARP 84


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YPSRAQPP 9
YP+R PP
Sbjct: 724 YPNRGLPP 731


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PSRAQPP 9
P+RA PP
Sbjct: 520 PTRASPP 526


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PSRAQPP 9
P+RA PP
Sbjct: 520 PTRASPP 526


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PSRAQPP 9
P+RA PP
Sbjct: 524 PTRASPP 530


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 3 PSRAQPP 9
P+RA PP
Sbjct: 524 PTRASPP 530


>sp|FAU1_PYRCJ|PROBABLE ribonuclease FAU-1|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YPSRAQPPS 10
+P+R +PPS
Sbjct: 416 FPARLRPPS 424


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PSRAQPP 9
P RA PP
Sbjct: 521 PGRASPP 527


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 1 FYPSRAQPPS 10
YP++A P S
Sbjct: 228 LYPAKAHPMS 237


>sp|RFCS_METVS|REPLICATION factor C small subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 YPSRAQPP 9
YPS+ PP
Sbjct: 139 YPSKIIPP 146


>sp|RFCS_METMP|REPLICATION factor C small subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 YPSRAQPP 9
YPS+ PP
Sbjct: 139 YPSKIIPP 146


>sp|RFCS_METM7|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C7 /

Query: 2 YPSRAQPP 9
YPS+ PP
Sbjct: 139 YPSKIIPP 146


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YPSRAQPP 9
YPS+ PP
Sbjct: 1670 YPSKIIPP 1677


>sp|RFCS_METM5|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C5 /

Query: 2 YPSRAQPP 9
YPS+ PP
Sbjct: 139 YPSKIIPP 146


>sp|SYFA_METVS|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 YPSRAQPPS 10
YP++A P S
Sbjct: 229 YPAKAHPMS 237


>sp|SYFA_METMP|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 YPSRAQPPS 10
YP++A P S
Sbjct: 229 YPAKAHPMS 237


>sp|RFCS_METM6|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C6 /

Query: 2 YPSRAQPP 9
YPS+ PP
Sbjct: 139 YPSKIIPP 146


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PSRAQPP 9
P RA PP
Sbjct: 522 PDRASPP 528


>sp|NADM_PYRAE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FYPSRAQPP 9
+P R QPP
Sbjct: 5 LFPGRFQPP 13


>sp|RTCA_THEGJ|RNA 3'-terminal phosphate cyclase|Thermococcus gammatolerans (strain

Query: 1 FYPSRAQP 8
F P RA+P
Sbjct: 77 FVPGRAEP 84


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 2 YPSRAQPP 9
+PS A PP
Sbjct: 352 HPSTASPP 359


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YPSRAQP 8
YPS A+P
Sbjct: 331 YPSEAKP 337


>sp|NADM_PYRAR|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FYPSRAQPP 9
+P R QPP
Sbjct: 5 LFPGRFQPP 13


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YPSRAQP 8
YPS A+P
Sbjct: 331 YPSEAKP 337


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 YPSRAQP 8
YPS A+P
Sbjct: 331 YPSEAKP 337


>sp|TRUA_METAR|TRNA pseudouridine synthase A|Methanocella arvoryzae (strain DSM 22066

Query: 1 FYPSRAQP 8
FY S+AQP
Sbjct: 14 FYGSQAQP 21




12|Sequence|56|65|AQPPSSAASR

***** No hits found ******


13|Sequence|61|70|SAASRVQSAA

***** No hits found ******


14|Sequence|66|75|VQSAAPARPG

>sp|RL10_METS3|LARGE ribosomal subunit protein uL10|Methanobrevibacter smithii (strain

Query: 2 QSAAPARPG 10
+++APA+PG
Sbjct: 104 KTSAPAKPG 112


>sp|RL10_METTH|LARGE ribosomal subunit protein uL10|Methanothermobacter

Query: 2 QSAAPARPG 10
++ APA+PG
Sbjct: 104 KTPAPAKPG 112




15|Sequence|71|80|PARPGPAAHV

>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PARPGPAAH 9
P RP P H
Sbjct: 512 PMRPAPVFH 520


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PARPGPAAH 9
P RP P H
Sbjct: 512 PMRPAPVFH 520


>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 4 PGPAAHV 10
PGP HV
Sbjct: 19 PGPLRHV 25


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PARPGPAAHV 10
P GPA H+
Sbjct: 174 PLNLGPATHI 183


>sp|RS4E_METKA|SMALL ribosomal subunit protein eS4|Methanopyrus kandleri (strain AV19

Query: 2 ARPGPAAHV 10
AR GP HV
Sbjct: 4 ARSGPKRHV 12


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 1 PARPGPAAH 9
P R GP AH
Sbjct: 175 PWRGGPVAH 183


>sp|TRUB_HALMA|PROBABLE tRNA pseudouridine synthase B|Haloarcula marismortui (strain ATCC

Query: 4 PGPAAH 9
PGP+AH
Sbjct: 45 PGPSAH 50


>sp|DNAG_METAC|DNA primase DnaG|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ARPGPAAHV 10
ARP PAA V
Sbjct: 378 ARPVPAARV 386




16|Sequence|76|85|PAAHVYPAGS

>sp|Y1435_PYRAB|UNCHARACTERIZED protein PYRAB14350|Pyrococcus abyssi (strain GE5 /

Query: 2 AAHVYPAGS 10
A H YP GS
Sbjct: 122 ALHFYPNGS 130


>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 2 AAHVYPAGS 10
A H+YP S
Sbjct: 199 AGHIYPVTS 207


>sp|HIS8_METAR|HISTIDINOL-PHOSPHATE aminotransferase|Methanocella arvoryzae (strain DSM 22066

Query: 3 AHVYPA 8
AHVYP+
Sbjct: 61 AHVYPS 66


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PAAHVYPAGS 10
PA +VY AG+
Sbjct: 282 PAGNVYQAGT 291


>sp|Y1383_THEVO|MEMO1 family protein TV1383|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PAAHVYPAGS 10
P A ++P+GS
Sbjct: 81 PYASIFPSGS 90


>sp|CMR1A_PYRFU|CRISPR system Cmr subunit Cmr1-1|Pyrococcus furiosus (strain ATCC 43587

Query: 4 HVYPAGS 10
H YP GS
Sbjct: 113 HYYPPGS 119


>sp|PGP_PYRIL|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 AAHVYPAG 9
A HV PAG
Sbjct: 141 AIHVRPAG 148


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PAAHVYPAGS 10
P+ +VY AG+
Sbjct: 284 PSGNVYEAGT 293


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 3 AHVYPAGS 10
AHV PAG
Sbjct: 185 AHVAPAGD 192




17|Sequence|81|90|YPAGSQVMMI

***** No hits found ******


18|Sequence|86|95|QVMMIPSQIS

***** No hits found ******


19|Sequence|91|100|PSQISYPASQ

>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC

Query: 1 PSQISYPA 8
P QI YPA
Sbjct: 46 PRQILYPA 53




20|Sequence|96|105|YPASQGAYYI

>sp|KDGK2_HALVD|2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 3 ASQGAYYI 10
A QGAYYI
Sbjct: 85 ARQGAYYI 92


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YPASQGAYY 9
YPA++ YY
Sbjct: 501 YPATEKLYY 509


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 2 PASQGAYY 9
PAS+GA++
Sbjct: 361 PASKGAFF 368


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YPASQGAYYI 10
YP S G +Y+
Sbjct: 379 YPYSIGGFYL 388


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 2 PASQGAYYI 10
PA G Y+I
Sbjct: 147 PADPGGYFI 155


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 PASQGAYYI 10
PA G Y+I
Sbjct: 152 PADPGGYFI 160


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 PASQGAYYI 10
PA G Y+I
Sbjct: 152 PADPGGYFI 160


>sp|TFE_PYRAR|TRANSCRIPTION factor E|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 SQGAYYI 10
++GAYYI
Sbjct: 115 TEGAYYI 121


>sp|KDGK1_HALVD|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 3 ASQGAYYI 10
A QG YY+
Sbjct: 87 ARQGVYYL 94


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 1 YPASQGAYY 9
YPA G++Y
Sbjct: 4 YPAVAGSFY 12


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 SQGAYYI 10
SQGA+Y+
Sbjct: 320 SQGAFYM 326


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 SQGAYYI 10
SQGA+Y+
Sbjct: 321 SQGAFYM 327


>sp|Y132_THEON|MEMO1 family protein TON_0132|Thermococcus onnurineus (strain NA1)

Query: 1 YPASQGAYY 9
YPA G++Y
Sbjct: 4 YPAVAGSFY 12


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 1 YPASQGAYY 9
YPA G++Y
Sbjct: 4 YPAVAGSFY 12


>sp|TFE_PYRIL|TRANSCRIPTION factor E|Pyrobaculum islandicum (strain DSM 4184

Query: 4 SQGAYYI 10
++GAYYI
Sbjct: 115 TEGAYYI 121




21|Sequence|101|110|GAYYIPGQGR

>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 YIPGQGR 10
++PGQGR
Sbjct: 361 WMPGQGR 367


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 YIPGQGR 10
++PGQGR
Sbjct: 361 WMPGQGR 367


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 3 YYIPG 7
YYIPG
Sbjct: 413 YYIPG 417


>sp|CSM5_METJA|CRISPR system Cms protein Csm5|Methanocaldococcus jannaschii (strain ATCC

Query: 3 YYIPG 7
YYIPG
Sbjct: 155 YYIPG 159


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 1 GAYYIPGQG 9
GA++ PG+G
Sbjct: 208 GAFHGPGEG 216


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 1 GAYYIPGQG 9
GA++ PG+G
Sbjct: 208 GAFHGPGEG 216


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 1 GAYYIPGQG 9
GA++ PG+G
Sbjct: 208 GAFHGPGEG 216


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 1 GAYYIPGQG 9
GA++ PG+G
Sbjct: 208 GAFHGPGEG 216


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 1 GAYYIPGQG 9
GA++ PG+G
Sbjct: 208 GAFHGPGEG 216


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 GAYYIPGQ 8
GAYY P +
Sbjct: 440 GAYYTPDE 447


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 YYIPG 7
YYIPG
Sbjct: 273 YYIPG 277


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GAYYIPGQGR 10
G YY+P + R
Sbjct: 236 GDYYVPMETR 245


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YYIPGQG 9
YYIP G
Sbjct: 319 YYIPATG 325


>sp|RNP4_METLZ|RIBONUCLEASE P protein component 4|Methanocorpusculum labreanum (strain ATCC

Query: 2 AYYIPG 7
AY+IPG
Sbjct: 67 AYFIPG 72


>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 3 YYIPGQGR 10
YY+ G GR
Sbjct: 197 YYLHGSGR 204


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 2 AYYIPGQG 9
A Y+PG+G
Sbjct: 10 APYVPGRG 17


>sp|GCH1_PYRNV|GTP cyclohydrolase 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 YIPGQG 9
YIPG G
Sbjct: 96 YIPGDG 101


>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 3 YYIPGQGR 10
YYI G+G+
Sbjct: 229 YYIFGEGK 236


>sp|TRM14_PYRFU|TRNA (guanine(6)-N2)-methyltransferase|Pyrococcus furiosus (strain

Query: 2 AYYIPGQGR 10
AYY+ +GR
Sbjct: 50 AYYVDEKGR 58


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 YYIPG 7
YYIPG
Sbjct: 276 YYIPG 280


>sp|PUS10_THEAC|TRNA pseudouridine synthase Pus10|Thermoplasma acidophilum (strain ATCC

Query: 3 YYIPGQGR 10
YY+ G GR
Sbjct: 204 YYLHGSGR 211


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GAYYIPG 7
GAY +PG
Sbjct: 26 GAYVVPG 32


>sp|CBID_METMJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GAYYIPGQG 9
G ++PG+G
Sbjct: 121 GVQFVPGEG 129


>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 1 GAYYIPGQGR 10
G Y +PG R
Sbjct: 401 GFYEVPGSAR 410


>sp|MDH_THEVO|MALATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 AYYIPG 7
AYY PG
Sbjct: 231 AYYAPG 236


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GAYYIPG 7
G Y++PG
Sbjct: 223 GPYFLPG 229




22|Sequence|106|115|PGQGRSTYVV

>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 PGQGRSTYV 9
PG G+ST+V
Sbjct: 293 PGSGKSTFV 301


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGQGRSTYV 9
PG G+ST+V
Sbjct: 26 PGSGKSTFV 34


>sp|PCNA_HALMA|DNA polymerase sliding clamp|Haloarcula marismortui (strain ATCC 43049

Query: 2 GQGRSTYVV 10
GQGR TY++
Sbjct: 232 GQGRVTYML 240


>sp|KCY_AERPE|CYTIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGQGRSTY 8
PG G+STY
Sbjct: 6 PGSGKSTY 13


>sp|KAD6_SULTO|PUTATIVE adenylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PGQGRSTYV 9
PG G+ST V
Sbjct: 9 PGSGKSTIV 17


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 GQGRSTYVV 10
QGRST++V
Sbjct: 669 AQGRSTFMV 677


>sp|Y1462_ARCFU|UNCHARACTERIZED protein AF_1462|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GQGRSTYVV 10
G+GR +Y+V
Sbjct: 24 GKGRMSYIV 32


>sp|PSTK_METJA|L-SERYL-TRNA(SEC) kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGQGRSTY 8
PG G+ST+
Sbjct: 9 PGVGKSTF 16


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PGQGRSTY 8
PG G+ST+
Sbjct: 9 PGSGKSTH 16


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 PGQGRSTY 8
PG G+ST+
Sbjct: 9 PGSGKSTH 16


>sp|KCY_SULTO|CYTIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PGQGRST 7
PG G+ST
Sbjct: 9 PGSGKST 15


>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PGQGRST 7
PG G+ST
Sbjct: 10 PGSGKST 16


>sp|KCY_HALLT|CYTIDYLATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PGQGRST 7
PG G+ST
Sbjct: 9 PGSGKST 15


>sp|Y518_METJA|ENERGY-CONVERTING hydrogenase subunit EhaL family|Methanocaldococcus jannaschii

Query: 1 PGQGRSTYVV 10
PG GR +VV
Sbjct: 72 PGYGRVEFVV 81


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PGQGRSTY 8
PG G+ST+
Sbjct: 9 PGSGKSTH 16


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PGQGRSTY 8
PG G+ST+
Sbjct: 9 PGSGKSTH 16


>sp|KCY_HALSA|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PGQGRST 7
PG G+ST
Sbjct: 9 PGSGKST 15


>sp|KCY_HALS3|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PGQGRST 7
PG G+ST
Sbjct: 9 PGSGKST 15


>sp|NTPTH_KORCO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PGQGRSTYVV 10
PG G+ST ++
Sbjct: 13 PGSGKSTCIM 22


>sp|NTPTH_METTH|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PGQGRSTYV 9
PG G+ST V
Sbjct: 9 PGSGKSTMV 17


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GQGRSTYVV 10
G GR Y+V
Sbjct: 228 GNGRDCYIV 236


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGQGRSTYV 9
PG G+ST V
Sbjct: 55 PGVGKSTLV 63


>sp|PUR5_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PGQGRSTYVV 10
PG+ + TY V
Sbjct: 203 PGESKKTYEV 212


>sp|NTPTH_METAC|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGQGRSTYV 9
PG G+ST V
Sbjct: 10 PGVGKSTVV 18




23|Sequence|111|120|STYVVPTQQY

>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 STYVVPTQQY 10
S Y++PT Y
Sbjct: 141 SPYIMPTTSY 150


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 2 TYVVPTQ 8
TY+VP Q
Sbjct: 565 TYIVPLQ 571


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 2 TYVVPTQ 8
TY+VP Q
Sbjct: 565 TYIVPLQ 571


>sp|Y399_METKA|UPF0201 protein MK0399|Methanopyrus kandleri (strain AV19 /

Query: 1 STYVVPTQ 8
+TYV PT+
Sbjct: 8 TTYVYPTE 15


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TYVVPTQQY 10
TY P++QY
Sbjct: 511 TYCSPSKQY 519


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 2 TYVVPTQQ 9
T+++PTQ+
Sbjct: 326 TFIMPTQE 333


>sp|Y104_SACS2|UNCHARACTERIZED aminotransferase SSO0104|Saccharolobus solfataricus (strain ATCC

Query: 3 YVVPTQQ 9
YV+PT Q
Sbjct: 174 YVIPTAQ 180


>sp|RS2_PYRAB|SMALL ribosomal subunit protein uS2|Pyrococcus abyssi (strain GE5 /

Query: 3 YVVPTQQY 10
Y+VP QY
Sbjct: 5 YLVPLDQY 12


>sp|Y671_SACI1|UPF0282 protein YN1551_0671|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 YVVPTQQY 10
YV+PT Y
Sbjct: 83 YVIPTDIY 90


>sp|Y2281_SACI2|UPF0282 protein LS215_2281|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 YVVPTQQY 10
YV+PT Y
Sbjct: 83 YVIPTDIY 90


>sp|Y2245_SACI7|UPF0282 protein YG5714_2245|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 YVVPTQQY 10
YV+PT Y
Sbjct: 83 YVIPTDIY 90


>sp|RS2_PYRHO|SMALL ribosomal subunit protein uS2|Pyrococcus horikoshii (strain ATCC

Query: 3 YVVPTQQY 10
Y+VP QY
Sbjct: 5 YLVPLDQY 12


>sp|Y2198_SACI3|UPF0282 protein M1627_2198|Saccharolobus islandicus (strain M.16.27)

Query: 3 YVVPTQQY 10
YV+PT Y
Sbjct: 83 YVIPTDIY 90


>sp|Y2116_SACI4|UPF0282 protein M1425_2116|Saccharolobus islandicus (strain M.14.25 /

Query: 3 YVVPTQQY 10
YV+PT Y
Sbjct: 83 YVIPTDIY 90


>sp|RS2_PYRFU|SMALL ribosomal subunit protein uS2|Pyrococcus furiosus (strain ATCC

Query: 3 YVVPTQQY 10
Y+VP QY
Sbjct: 5 YLVPLDQY 12


>sp|Y2122_SACI6|UPF0282 protein M164_2122|Saccharolobus islandicus (strain M.16.4 /

Query: 3 YVVPTQQY 10
YV+PT Y
Sbjct: 83 YVIPTDIY 90


>sp|RS2_THEKO|SMALL ribosomal subunit protein uS2|Thermococcus kodakarensis (strain

Query: 3 YVVPTQQY 10
Y+VP QY
Sbjct: 4 YLVPLDQY 11




24|Sequence|116|125|PTQQYPVQPG

>sp|SFSA_AERPE|SUGAR fermentation stimulation protein homolog|Aeropyrum pernix (strain

Query: 1 PTQQYPVQPG 10
P Q P+QPG
Sbjct: 230 PVQCPPLQPG 239


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain ATCC

Query: 5 YPVQPG 10
YP+QPG
Sbjct: 279 YPLQPG 284


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 QYPVQPG 10
Q+P+QPG
Sbjct: 17 QHPMQPG 23


>sp|Y020_PYRFU|UPF0173 protein PF0020|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PTQQYPV 7
PT QYP+
Sbjct: 105 PTSQYPL 111


>sp|Y119_PYRAB|UPF0173 protein PYRAB01190|Pyrococcus abyssi (strain GE5 /

Query: 1 PTQQYPV 7
PT QYP+
Sbjct: 105 PTSQYPL 111


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 1 PTQQYPVQP 9
PT P+QP
Sbjct: 168 PTDGSPIQP 176


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 4 QYPVQPG 10
QYPV+ G
Sbjct: 305 QYPVEDG 311




25|Sequence|121|130|PVQPGAPGFY

>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PVQPGAPGF 9
P PG+PG+
Sbjct: 15 PPLPGSPGY 23


>sp|RS19_METJA|SMALL ribosomal subunit protein uS19|Methanocaldococcus jannaschii

Query: 1 PVQPGAPG 8
PVQ GAPG
Sbjct: 132 PVQHGAPG 139


>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 1 PVQPGAPGFY 10
P+ PG G Y
Sbjct: 545 PLSPGGVGLY 554


>sp|Y1487_ARCFU|UNCHARACTERIZED protein AF_1487|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PGAPGF 9
PG PGF
Sbjct: 193 PGIPGF 198


>sp|RS6E_SACI6|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 5 GAPGFY 10
G PGFY
Sbjct: 179 GPPGFY 184


>sp|RS6E_SACI3|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 5 GAPGFY 10
G PGFY
Sbjct: 179 GPPGFY 184


>sp|RS6E_SACI2|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 5 GAPGFY 10
G PGFY
Sbjct: 179 GPPGFY 184


>sp|RS6E_SACI7|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 5 GAPGFY 10
G PGFY
Sbjct: 179 GPPGFY 184


>sp|RS6E_SACI4|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 5 GAPGFY 10
G PGFY
Sbjct: 179 GPPGFY 184


>sp|FWDD_METJA|PROTEIN FwdD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVQPGAPGFY 10
P G PGFY
Sbjct: 98 PTFKGYPGFY 107


>sp|RS3_AERPE|SMALL ribosomal subunit protein uS3|Aeropyrum pernix (strain ATCC 700893

Query: 2 VQPGAPG 8
V+PG PG
Sbjct: 185 VKPGKPG 191


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 PVQPGAPGFY 10
P PG PG++
Sbjct: 194 PWGPGRPGWH 203


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PVQPGAPGFY 10
P PG PG++
Sbjct: 195 PWGPGRPGWH 204


>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 5 GAPGFY 10
G PGFY
Sbjct: 179 GPPGFY 184


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 4 PGAPGF 9
PG+PG+
Sbjct: 18 PGSPGY 23


>sp|RS6E_AERPE|SMALL ribosomal subunit protein eS6|Aeropyrum pernix (strain ATCC 700893

Query: 1 PVQPGAPG 8
P+ PG PG
Sbjct: 170 PMHPGVPG 177


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 5 GAPGFY 10
G PGFY
Sbjct: 178 GPPGFY 183


>sp|FNO_ARCFU|F420-DEPENDENT NADP reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PVQPGAPGF 9
PV GA GF
Sbjct: 99 PVSRGAKGF 107


>sp|APGM_PYRHO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PVQPGAPG 8
P++PG P
Sbjct: 51 PIKPGQPA 58


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 1 PVQPGAP 7
P +PGAP
Sbjct: 259 PGEPGAP 265


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 1 PVQPGAP 7
P +PGAP
Sbjct: 259 PGEPGAP 265


>sp|APGM_PYRAB|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 PVQPGAPG 8
P++PG P
Sbjct: 49 PIKPGQPA 56


>sp|APGM_THEGJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus gammatolerans (strain DSM

Query: 1 PVQPGAPG 8
P++PG P
Sbjct: 50 PIKPGQPA 57


>sp|APGM_THEKO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus kodakarensis (strain ATCC

Query: 1 PVQPGAPG 8
P++PG P
Sbjct: 50 PIKPGQPA 57


>sp|DGGGP_HYPBU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 2 VQPGAPGFY 10
V PGA FY
Sbjct: 88 VSPGAARFY 96


>sp|APGM_PYRFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PVQPGAPG 8
P++PG P
Sbjct: 50 PIKPGQPA 57


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 QPGAPGFY 10
QPG P F+
Sbjct: 30 QPGRPKFF 37




26|Sequence|126|135|APGFYPGASP

>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 3 GFYPGASP 10
GF+PG +P
Sbjct: 205 GFFPGRNP 212


>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 2 PGFYP 6
PGFYP
Sbjct: 181 PGFYP 185


>sp|RS6E_SACI7|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 PGFYP 6
PGFYP
Sbjct: 181 PGFYP 185


>sp|RS6E_SACI6|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 PGFYP 6
PGFYP
Sbjct: 181 PGFYP 185


>sp|RS6E_SACI4|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 PGFYP 6
PGFYP
Sbjct: 181 PGFYP 185


>sp|RS6E_SACI3|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 PGFYP 6
PGFYP
Sbjct: 181 PGFYP 185


>sp|RS6E_SACI2|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 PGFYP 6
PGFYP
Sbjct: 181 PGFYP 185


>sp|MCRG_METVA|METHYL-COENZYME M reductase subunit gamma|Methanococcus vannielii

Query: 2 PGFYPGAS 9
P FYPGA+
Sbjct: 5 PQFYPGAT 12


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 2 PGFYP 6
PGFYP
Sbjct: 180 PGFYP 184


>sp|RS4E_KORCO|SMALL ribosomal subunit protein eS4|Korarchaeum cryptofilum (strain

Query: 1 APGFYPGA 8
APG+YP A
Sbjct: 15 APGYYPIA 22


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 2 PGFYPGASP 10
PG YP +P
Sbjct: 353 PGLYPIGNP 361


>sp|Y672_PYRHO|UPF0252 protein PH0672|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GFYPG 7
GFYPG
Sbjct: 202 GFYPG 206


>sp|CDC62_METTH|ORC1-TYPE DNA replication protein 2|Methanothermobacter thermautotrophicus

Query: 3 GFYPG 7
GFYPG
Sbjct: 227 GFYPG 231


>sp|GATD_METS5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Metallosphaera sedula (strain ATCC 51363

Query: 4 FYPGASP 10
FYPG P
Sbjct: 309 FYPGLRP 315


>sp|RS4_METST|SMALL ribosomal subunit protein uS4|Methanosphaera stadtmanae (strain

Query: 4 FYPGAS 9
FYPG+S
Sbjct: 154 FYPGSS 159


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 4 FYPGASP 10
FYPG SP
Sbjct: 322 FYPGMSP 328


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 3 GFYPGASP 10
GF+PG P
Sbjct: 206 GFFPGRDP 213


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 PGFYPGASP 10
PG++P P
Sbjct: 384 PGYFPFTEP 392


>sp|SYFA_SULAC|PHENYLALANINE--TRNA ligase alpha subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PGFYPGASP 10
PG++P P
Sbjct: 383 PGYFPFTEP 391


>sp|SYFA_ARCFU|PHENYLALANINE--TRNA ligase alpha subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGFYPGASP 10
PG++P P
Sbjct: 391 PGYFPYTEP 399


>sp|RS6E_SULAC|SMALL ribosomal subunit protein eS6|Sulfolobus acidocaldarius (strain

Query: 2 PGFYP 6
PG+YP
Sbjct: 180 PGYYP 184


>sp|SYFA_METBF|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 PGFYPGASP 10
PG++P P
Sbjct: 409 PGYFPYTEP 417


>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PGFYPG 7
P FYPG
Sbjct: 5 PQFYPG 10


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 APGFYPG 7
PGFY G
Sbjct: 358 GPGFYDG 364


>sp|MCRG_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PGFYPGAS 9
P FYPG +
Sbjct: 5 PQFYPGQT 12


>sp|SYFA_METMA|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGFYPGASP 10
PG++P P
Sbjct: 412 PGYFPYTEP 420


>sp|GATD_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcoides burtonii (strain DSM

Query: 4 FYPGASP 10
F PGA+P
Sbjct: 294 FVPGANP 300


>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix

Query: 2 PGFYPGAS 9
PG +PG +
Sbjct: 58 PGLFPGTA 65


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 APGFYPGA 8
APG PG+
Sbjct: 49 APGIIPGS 56


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 2 PGFYPGAS 9
P YPG+S
Sbjct: 788 PSSYPGSS 795


>sp|MCRG_METVO|METHYL-COENZYME M reductase subunit gamma|Methanococcus voltae

Query: 2 PGFYPGAS 9
P FYP A+
Sbjct: 5 PQFYPSAT 12


>sp|RL4_SACI6|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 APGFYPG 7
APG +PG
Sbjct: 238 APGAHPG 244


>sp|RL4_SACI4|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 APGFYPG 7
APG +PG
Sbjct: 238 APGAHPG 244


>sp|RL4_SACI3|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 APGFYPG 7
APG +PG
Sbjct: 238 APGAHPG 244


>sp|RL4_SACS2|LARGE ribosomal subunit protein uL4|Saccharolobus solfataricus (strain

Query: 1 APGFYPG 7
APG +PG
Sbjct: 238 APGAHPG 244


>sp|Y343_META3|UPF0280 protein Maeo_0343|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GFYPGASP 10
G Y G+SP
Sbjct: 121 GLYAGSSP 128


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 PGFYPGASP 10
PG++P P
Sbjct: 391 PGYFPYTEP 399


>sp|RL4_METS3|LARGE ribosomal subunit protein uL4|Methanobrevibacter smithii (strain

Query: 1 APGFYPG 7
APG +PG
Sbjct: 230 APGTHPG 236


>sp|Y1519_METMJ|UPF0280 protein Memar_1519|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GFYPGASP 10
G Y GASP
Sbjct: 120 GIYAGASP 127


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 2 PGFYPG 7
PGF PG
Sbjct: 364 PGFLPG 369


>sp|SYFA_METAC|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PGFYPGASP 10
PG++P P
Sbjct: 409 PGYFPYTEP 417


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 APGFYPG 7
APG +PG
Sbjct: 231 APGTHPG 237


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain NA1)

Query: 1 APGFYPG 7
APG +PG
Sbjct: 231 APGTHPG 237


>sp|GATD_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrobaculum aerophilum (strain ATCC

Query: 4 FYPGASP 10
FYPG P
Sbjct: 291 FYPGMHP 297


>sp|SYFA_METHJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PGFYPGASP 10
PG++P P
Sbjct: 392 PGYFPYTEP 400


>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 APGFYP 6
APGF+P
Sbjct: 192 APGFFP 197


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PGFYPGASP 10
PG++P P
Sbjct: 396 PGYFPYTEP 404




27|Sequence|131|140|PGASPTEFGT

>sp|Y296_METJA|PROBABLE metallo-hydrolase MJ0296|Methanocaldococcus jannaschii (strain ATCC

Query: 3 ASPTEFG 9
ASP EFG
Sbjct: 105 ASPKEFG 111


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GASPTEFGT 10
G +P EFGT
Sbjct: 65 GGTPLEFGT 73


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GASPTEFG 9
GAS TEFG
Sbjct: 403 GASSTEFG 410


>sp|DUT_METMA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 1 PGASPTEFG 9
P A P EFG
Sbjct: 61 PDAKPLEFG 69


>sp|IF5A_META3|TRANSLATION initiation factor 5A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PGASPTEFGT 10
PG P E G+
Sbjct: 2 PGTKPVELGS 11


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GASPTEFGT 10
GA P EFGT
Sbjct: 65 GAVPFEFGT 73


>sp|PYRDB_METTH|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanothermobacter

Query: 2 GASPTEFGT 10
GASP EF +
Sbjct: 101 GASPEEFAS 109


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GASPTEFGT 10
G P EFGT
Sbjct: 91 GGMPIEFGT 99


>sp|Y1511_METMJ|UPF0316 protein Memar_1511|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PGASPTEFG 9
PG +P FG
Sbjct: 184 PGPTPFSFG 192




28|Sequence|136|145|TEFGTYAGAY

>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TEFGTYAGAY 10
T+FG YA Y
Sbjct: 394 TDFGIYANIY 403


>sp|PYRC_SULTO|DIHYDROOROTASE tokodaii (strain DSM 16993

Query: 1 TEFGTYAG 8
T+FG Y+G
Sbjct: 109 TDFGIYSG 116


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 1 TEFGTYAG 8
T FG+YAG
Sbjct: 386 TLFGSYAG 393


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TEFGTYAGAY 10
T FG Y G++
Sbjct: 95 TNFGKYFGSF 104


>sp|RL22_METLZ|LARGE ribosomal subunit protein uL22|Methanocorpusculum labreanum

Query: 3 FGTYAGAY 10
FGT AG Y
Sbjct: 79 FGTAAGRY 86


>sp|CDC63_SULTO|ORC1-TYPE DNA replication protein 3|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EFGTYAGAY 10
E+G Y G Y
Sbjct: 220 EYGLYRGTY 228


>sp|Y138_META3|PROTEIN Maeo_0138|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EFGTYAG 8
E+GTY G
Sbjct: 133 EYGTYRG 139


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 1 TEFGTYAG 8
T FG YAG
Sbjct: 401 TAFGGYAG 408


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 1 TEFGTYAG 8
T FG YAG
Sbjct: 401 TAFGGYAG 408


>sp|Y868_THEGJ|UPF0200 protein TGAM_0868|Thermococcus gammatolerans (strain DSM 15229

Query: 2 EFGTYAGAY 10
E GT+ GA+
Sbjct: 94 EVGTFRGAF 102


>sp|Y1334_THEKO|UPF0200 protein TK1334|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EFGTYAGAY 10
E GT+ GA+
Sbjct: 94 EVGTFRGAF 102


>sp|THIM_HALWD|HYDROXYETHYLTHIAZOLE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EFGTYAG 8
EFG YAG
Sbjct: 245 EFGEYAG 251


>sp|COMD_METJA|SULFOPYRUVATE decarboxylase subunit alpha|Methanocaldococcus jannaschii (strain

Query: 3 FGTYAGAY 10
FG AGAY
Sbjct: 52 FGICAGAY 59


>sp|COFH_META3|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus aeolicus (strain ATCC

Query: 3 FGTYAGA 9
+GTY GA
Sbjct: 331 YGTYMGA 337


>sp|AGL11_HALVD|LOW-SALT glycan biosynthesis nucleotidyltransferase Agl11|Haloferax volcanii

Query: 4 GTYAGAY 10
GTY G Y
Sbjct: 286 GTYVGPY 292




29|Sequence|141|150|YAGAYYPAQG

>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 AYYPAQG 10
A+YPAQG
Sbjct: 353 AWYPAQG 359


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 1 YAGAYYPAQG 10
+AG Y+P +G
Sbjct: 238 HAGKYHPVKG 247


>sp|CAS1_METTH|CRISPR-ASSOCIATED endonuclease Cas1|Methanothermobacter thermautotrophicus (strain

Query: 1 YAGAYYPAQ 9
Y+G++YP +
Sbjct: 84 YSGSFYPRE 92


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 AYYPAQG 10
A++PAQG
Sbjct: 358 AWFPAQG 364


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 AYYPAQG 10
A++PAQG
Sbjct: 358 AWFPAQG 364


>sp|SYS_PICTO|SERINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 AYYPAQG 10
A++PAQG
Sbjct: 357 AWFPAQG 363


>sp|MSRA_METMP|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 2 AGAYYPAQ 9
AG++YPA+
Sbjct: 133 AGSFYPAE 140


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 YYPAQG 10
+YPAQG
Sbjct: 364 WYPAQG 369


>sp|Y2678_METMA|UNCHARACTERIZED serpin-like protein MM_2675|Methanosarcina mazei (strain ATCC

Query: 4 AYYPAQG 10
A+YPA G
Sbjct: 232 AFYPANG 238


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AGAYYPA 8
AGAY PA
Sbjct: 23 AGAYLPA 29


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 AGAYYPA 8
AGAY PA
Sbjct: 23 AGAYLPA 29


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 AGAYYPA 8
AGAY PA
Sbjct: 23 AGAYLPA 29


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 AGAYYPA 8
AGAY PA
Sbjct: 23 AGAYLPA 29


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AGAYYPA 8
AGAY PA
Sbjct: 23 AGAYLPA 29


>sp|AROD_METST|3-DEHYDROQUINATE dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YAGAYYPA 8
Y G Y+P+
Sbjct: 81 YEGGYFPS 88


>sp|Y1389_PYRHO|UPF0111 protein PH1389|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YAGAYYPA 8
Y GA+ PA
Sbjct: 68 YGGAFLPA 75


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 AGAYYPA 8
AGAY PA
Sbjct: 22 AGAYLPA 28


>sp|CAS1_METJA|CRISPR-ASSOCIATED endonuclease Cas1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YAGAYYPAQ 9
Y G++YP +
Sbjct: 72 YDGSFYPRE 80


>sp|RS8E_ARCFU|SMALL ribosomal subunit protein eS8|Archaeoglobus fulgidus (strain ATCC

Query: 1 YAGAYYPAQG 10
YA Y P QG
Sbjct: 60 YANVYDPKQG 69


>sp|CAS1B_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YAGAYYPAQ 9
Y G++YP +
Sbjct: 72 YIGSFYPRE 80


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YAGAYYPAQ 9
Y G++YP +
Sbjct: 72 YDGSFYPRE 80


>sp|CAS1A_METRM|CRISPR-ASSOCIATED protein Cas1 1|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 YAGAYYPAQ 9
Y G++YP +
Sbjct: 72 YNGSFYPRE 80


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 2 AGAYYPA 8
AG++YPA
Sbjct: 8 AGSFYPA 14


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 YAGAYYPAQG 10
Y G+ YP +G
Sbjct: 323 YDGSLYPVRG 332


>sp|Y1771_AERPE|MEMO1 family protein APE_1771|Aeropyrum pernix (strain ATCC 700893

Query: 1 YAGAYYPA 8
+AG +YPA
Sbjct: 8 HAGTFYPA 15


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 2 AGAYYPA 8
AG++YPA
Sbjct: 8 AGSFYPA 14


>sp|CSA5B_SACS2|CRISPR type I-A cluster 2/Apern-associated|Saccharolobus solfataricus

Query: 3 GAYYPAQG 10
G YPAQG
Sbjct: 72 GKDYPAQG 79




30|Sequence|146|155|YPAQGVQQFP

>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 1 YPAQGVQQFP 10
YP G+ FP
Sbjct: 460 YPRHGIGYFP 469


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YPAQGV 6
YPAQG+
Sbjct: 355 YPAQGM 360


>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum

Query: 1 YPAQGV 6
YPA+GV
Sbjct: 38 YPAEGV 43


>sp|TRPG_SACS2|ANTHRANILATE synthase component 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YPAQGVQQFP 10
YP GVQ P
Sbjct: 167 YPIYGVQFHP 176




31|Sequence|151|160|VQQFPTGVAP

>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PTGVAP 10
PTG+AP
Sbjct: 237 PTGIAP 242


>sp|PURE_ARCFU|PHOSPHORIBOSYLAMINOIMIDAZOLE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QFPTGVAP 10
+ P+GVAP
Sbjct: 126 RMPSGVAP 133


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei

Query: 3 QFPTGVAP 10
QFP G AP
Sbjct: 23 QFPPGTAP 30


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VQQFPTGVAP 10
V FPT +AP
Sbjct: 483 VPSFPTWLAP 492




32|Sequence|156|165|TGVAPTPVLM

>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GVAPTPVL 9
G+ PTPVL
Sbjct: 65 GIVPTPVL 72


>sp|DADD_META3|5'-DEOXYADENOSINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 TGVAPTPVLM 10
+G+AP P LM
Sbjct: 276 SGIAPIPKLM 285


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GVAPTPVL 9
G+ PTPVL
Sbjct: 65 GMVPTPVL 72


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 2 GVAPTPVL 9
G+ PTPVL
Sbjct: 65 GMVPTPVL 72


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 2 GVAPTPVL 9
G+ PTPVL
Sbjct: 65 GMVPTPVL 72


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 2 GVAPTPVL 9
G+APTP +
Sbjct: 76 GIAPTPAI 83


>sp|DADD_METJA|5'-DEOXYADENOSINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TGVAPTPVLM 10
+GVAP P L+
Sbjct: 272 SGVAPIPKLL 281


>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GVAPTPVL 9
G+APTP L
Sbjct: 72 GMAPTPAL 79


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain

Query: 2 GVAPTPVLM 10
G+AP PVL+
Sbjct: 53 GIAPKPVLL 61


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GVAPTPVL 9
G+ PTP L
Sbjct: 65 GIVPTPTL 72


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 2 GVAPTPVLM 10
G++PTP ++
Sbjct: 560 GISPTPAIV 568


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GVAPTPVL 9
GV P PVL
Sbjct: 670 GVVPDPVL 677


>sp|CHEB_HALMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Haloarcula

Query: 4 APTPVLM 10
+PTPVLM
Sbjct: 75 SPTPVLM 81


>sp|GLYA_METPE|SERINE hydroxymethyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 TGVAPTPV 8
TGV P+PV
Sbjct: 208 TGVHPSPV 215


>sp|MTAD_HALWD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TGVAPTPVLM 10
+G+AP P L+
Sbjct: 291 SGIAPIPALL 300


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VAPTPVL 9
+ PTPVL
Sbjct: 67 IVPTPVL 73


>sp|GLMM_METST|PROBABLE phosphoglucosamine mutase|Methanosphaera stadtmanae (strain ATCC

Query: 2 GVAPTPVL 9
G+ PTPV+
Sbjct: 76 GMVPTPVV 83


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 TGVAPTPV 8
TG+ P+PV
Sbjct: 207 TGIHPSPV 214


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 2 GVAPTPVL 9
G+APTP++
Sbjct: 71 GLAPTPLV 78


>sp|DNAK_THEAC|CHAPERONE protein DnaK|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TGVAPTP 7
TG+AP P
Sbjct: 436 TGIAPAP 442


>sp|DNAK_THEVO|CHAPERONE protein DnaK|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TGVAPTP 7
TG+AP P
Sbjct: 437 TGIAPAP 443


>sp|GLMM_PYRFU|PROBABLE phosphoglucosamine mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GVAPTPV 8
G+APTP+
Sbjct: 71 GLAPTPL 77


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC 700027

Query: 1 TGVAPTPV 8
TG+A TPV
Sbjct: 293 TGLAVTPV 300


>sp|GLMM_PYRHO|PROBABLE phosphoglucosamine mutase|Pyrococcus horikoshii (strain ATCC

Query: 2 GVAPTPV 8
G+APTP+
Sbjct: 71 GLAPTPL 77


>sp|CHEB_HALSA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Halobacterium

Query: 5 PTPVLM 10
PTP+LM
Sbjct: 73 PTPILM 78


>sp|CHEB_HALS3|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Halobacterium

Query: 5 PTPVLM 10
PTP+LM
Sbjct: 73 PTPILM 78


>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 2 GVAPTPV 8
G+APTP+
Sbjct: 71 GLAPTPL 77


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 2 GVAPTPV 8
G+APTP+
Sbjct: 71 GLAPTPL 77


>sp|GLMM_THEKO|PROBABLE phosphoglucosamine mutase|Thermococcus kodakarensis (strain ATCC

Query: 2 GVAPTPV 8
G+APTP+
Sbjct: 71 GLAPTPL 77


>sp|RL10_STAMF|LARGE ribosomal subunit protein uL10|Staphylothermus marinus (strain ATCC

Query: 1 TGVAPTPVL 9
TG++P P+L
Sbjct: 131 TGLSPGPIL 139


>sp|NADK_NATPD|NAD kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 VAPTPVL 9
V+PTPVL
Sbjct: 71 VSPTPVL 77


>sp|PMDHS_AERPE|PHOSPHOMEVALONATE dehydratase small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 TGVAPTPVLM 10
GVAP +LM
Sbjct: 71 NGVAPLAILM 80




33|Sequence|161|170|TPVLMNQPPQ

>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 2 PVLMNQPP 9
P+++ QPP
Sbjct: 58 PIVVGQPP 65


>sp|Y345_METJA|UNCHARACTERIZED protein MJ0345|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TPVLMNQP 8
TP+LMN P
Sbjct: 85 TPILMNTP 92


>sp|SYY1_PYRAE|TYROSINE--TRNA ligase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TPVLMNQPPQ 10
TP ++ +PPQ
Sbjct: 299 TPFIIKRPPQ 308


>sp|Y158_METJA|UPF0425 pyridoxal phosphate-dependent protein MJ0158|Methanocaldococcus

Query: 3 VLMNQPP 9
+L NQPP
Sbjct: 187 LLFNQPP 193


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 TPVLMNQPPQ 10
TPV+++ PP+
Sbjct: 450 TPVVLSLPPK 459


>sp|RL2_CALMQ|LARGE ribosomal subunit protein uL2|Caldivirga maquilingensis (strain

Query: 1 TPVLMNQPP 9
TPV N PP
Sbjct: 215 TPVKKNAPP 223


>sp|GCSH2_SULTO|PROBABLE glycine cleavage system H|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PVLMNQPP 9
PVL+NQ P
Sbjct: 97 PVLVNQDP 104




34|Sequence|166|175|NQPPQIAPKR

>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 PPQIAPKR 10
PP+I+PK+
Sbjct: 274 PPEISPKQ 281


>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 4 PQIAPKR 10
PQIAP R
Sbjct: 330 PQIAPNR 336


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 1 NQPPQIAP 8
N PP+I P
Sbjct: 404 NTPPEILP 411


>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PPQIAPKR 10
PP +APK+
Sbjct: 287 PPTVAPKQ 294


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PPQIAPKR 10
PP +APK+
Sbjct: 287 PPTVAPKQ 294


>sp|SDX_THEAC|PROBABLE sulredoxin|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 QPPQIAP 8
+PP +AP
Sbjct: 79 EPPSVAP 85


>sp|DPM1_PYRFU|DOLICHOL-PHOSPHATE mannosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QPPQIAPK 9
PP++ PK
Sbjct: 94 HPPEVIPK 101


>sp|Y326_METJA|PUTATIVE permease MJ0326|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NQPPQIAP 8
+ PP IAP
Sbjct: 223 SMPPSIAP 230


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PPQIAP 8
PP++AP
Sbjct: 283 PPEVAP 288


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PPQIAPKR 10
PP++AP +
Sbjct: 274 PPEVAPHQ 281


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QPPQIAPK 9
QPP+ PK
Sbjct: 427 QPPEPCPK 434


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 QPPQIAPKR 10
+PP++ P R
Sbjct: 224 EPPRVLPAR 232


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PPQIAPKR 10
PP +AP R
Sbjct: 270 PPNLAPAR 277


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PPQIAP 8
PP+IAP
Sbjct: 286 PPEIAP 291


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PPQIAP 8
PP+IAP
Sbjct: 286 PPEIAP 291


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PPQIAP 8
PP++AP
Sbjct: 283 PPEVAP 288


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PPQIAP 8
PP++AP
Sbjct: 280 PPEVAP 285


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PPQIAPKR 10
PP++AP +
Sbjct: 285 PPEVAPTQ 292


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PPQIAP 8
PP+IAP
Sbjct: 286 PPEIAP 291




35|Sequence|171|180|IAPKRERKTI

>sp|COBQ_METMJ|PROBABLE cobyric acid synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IAPKRERKT 9
IA KR+RKT
Sbjct: 237 IADKRDRKT 245


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IAPKRERKT 9
IAPKRE T
Sbjct: 287 IAPKREEVT 295


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 IAPKRERKT 9
IAPKRE T
Sbjct: 294 IAPKREDVT 302


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IAPKRERKT 9
IAPKRE T
Sbjct: 317 IAPKREDVT 325


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PKRERKTI 10
PK++RK I
Sbjct: 332 PKKDRKVI 339


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 IAPKRERKT 9
IAPKR+ T
Sbjct: 284 IAPKRDEAT 292


>sp|RS19_METBF|SMALL ribosomal subunit protein uS19|Methanosarcina barkeri (strain

Query: 1 IAPKRERKTI 10
+ P RER++I
Sbjct: 37 LLPSRERRSI 46


>sp|RS6E_METAR|SMALL ribosomal subunit protein eS6|Methanocella arvoryzae (strain DSM

Query: 1 IAPKRERK 8
+APK+E+K
Sbjct: 123 LAPKKEKK 130


>sp|RS19_METM6|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 1 IAPKRERKTI 10
I P R+R+T+
Sbjct: 52 IVPSRQRRTM 61


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IAPKRE 6
IAPKRE
Sbjct: 295 IAPKRE 300


>sp|RS19_METM7|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 1 IAPKRERKTI 10
I P R+R+T+
Sbjct: 52 IVPSRQRRTM 61


>sp|RS19_METMP|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 1 IAPKRERKTI 10
I P R+R+T+
Sbjct: 52 IVPSRQRRTM 61


>sp|RS19_METMA|SMALL ribosomal subunit protein uS19|Methanosarcina mazei (strain ATCC

Query: 1 IAPKRERKTI 10
+ P RER++I
Sbjct: 37 LLPSRERRSI 46


>sp|IF2B_PYRAR|TRANSLATION initiation factor 2 subunit|Pyrobaculum arsenaticum (strain DSM

Query: 1 IAPKRERKT 9
+APK +R+T
Sbjct: 16 VAPKAQRRT 24


>sp|RS19_METM5|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 1 IAPKRERKTI 10
I P R+R+T+
Sbjct: 52 IVPSRQRRTM 61




36|Sequence|176|185|ERKTIRIRDP

>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii (strain

Query: 2 RKTIRIRDP 10
R TIR+R+P
Sbjct: 140 RFTIRVREP 148


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 KTIRIRD 9
+TIRIRD
Sbjct: 4 RTIRIRD 10


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ERKTIRIRDP 10
+ KT+ I+DP
Sbjct: 91 QNKTVYIKDP 100


>sp|RIFK_METTH|RIBOFLAVIN kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RKTIRIRD 9
RKT+++RD
Sbjct: 100 RKTLKLRD 107


>sp|DHQS_HALMA|3-DEHYDROQUINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 RKTIRIRD 9
RKT+ +RD
Sbjct: 195 RKTVEVRD 202


>sp|RL3_METMA|LARGE ribosomal subunit protein uL3|Methanosarcina mazei (strain ATCC

Query: 1 ERKTIRIRDP 10
++ IR+RDP
Sbjct: 305 SKRLIRLRDP 314


>sp|RL3_METAC|LARGE ribosomal subunit protein uL3|Methanosarcina acetivorans (strain

Query: 1 ERKTIRIRDP 10
++ IR+RDP
Sbjct: 305 SKRLIRLRDP 314


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain Fusaro

Query: 1 ERKTIRIRDP 10
++ IR+RDP
Sbjct: 305 SKRLIRLRDP 314


>sp|ENDA_ARCFU|TRNA-SPLICING endonuclease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERKTIRIRD 9
ERKTIR+ +
Sbjct: 98 ERKTIRMEE 106


>sp|HMVA_METVO|DNA-BINDING protein HmvA|Methanococcus voltae

Query: 2 RKTIRIRD 9
RKTI+ RD
Sbjct: 51 RKTIKARD 58




37|Sequence|181|190|RIRDPNQGGK

>sp|AROD_IGNH4|3-DEHYDROQUINATE dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IRDPNQGG 9
+RDP +GG
Sbjct: 63 VRDPEEGG 70


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RIRDPNQG 8
RIRDP G
Sbjct: 67 RIRDPETG 74


>sp|PYRB_HALSA|ASPARTATE carbamoyltransferase catalytic subunit|Halobacterium salinarum

Query: 2 IRDPNQGG 9
+R PNQG
Sbjct: 102 LRHPNQGA 109


>sp|SODM_HALMA|SUPEROXIDE dismutase [Mn]|Haloarcula marismortui (strain ATCC 43049

Query: 4 DPNQGGK 10
DPN GG+
Sbjct: 87 DPNGGGE 93


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 3 RDPNQGG 9
RDP +GG
Sbjct: 117 RDPKRGG 123


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RIRDPNQG 8
+++DPN G
Sbjct: 279 KLKDPNTG 286


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RIRDPNQG 8
+++DPN G
Sbjct: 702 KLKDPNTG 709


>sp|SODM_HALHI|SUPEROXIDE dismutase [Mn]|Haloarcula hispanica

Query: 4 DPNQGGK 10
DPN GG+
Sbjct: 50 DPNGGGE 56




38|Sequence|186|195|NQGGKDITEE

>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NQGGKDITEE 10
+Q GKD+ EE
Sbjct: 435 SQNGKDLLEE 444


>sp|PORA_METTM|PYRUVATE synthase subunit PorA|Methanothermobacter marburgensis (strain ATCC

Query: 3 GGKDITEE 10
GG+DIT E
Sbjct: 350 GGRDITPE 357


>sp|TRMY_PYRAB|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus abyssi

Query: 2 QGGKDITE 9
+ GKDITE
Sbjct: 138 EDGKDITE 145


>sp|HEM1_SACS2|GLUTAMYL-TRNA reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NQGGKDIT 8
N+G KD+T
Sbjct: 204 NEGAKDVT 211


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 GKDITEE 10
GK+ITEE
Sbjct: 210 GKEITEE 216


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NQGGKDI 7
N GGKDI
Sbjct: 494 NSGGKDI 500


>sp|CPS_METS3|CARBAMOYL-PHOSPHATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 QGGKDI 7
QGGKDI
Sbjct: 150 QGGKDI 155


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GKDITEE 10
G+D+TEE
Sbjct: 348 GEDLTEE 354


>sp|MRE11_PYRHO|DNA double-strand break repair protein|Pyrococcus horikoshii (strain

Query: 1 NQGGKDITEE 10
+QG +DITE+
Sbjct: 172 HQGIRDITEK 181


>sp|FUCA_METMP|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain DSM 14266

Query: 4 GKDITE 9
GKDITE
Sbjct: 153 GKDITE 158


>sp|FUCA_METM7|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain C7 /

Query: 4 GKDITE 9
GKDITE
Sbjct: 153 GKDITE 158


>sp|FUCA_METM5|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain C5 /

Query: 4 GKDITE 9
GKDITE
Sbjct: 153 GKDITE 158


>sp|Y891_STAMF|UPF0173 metal-dependent hydrolase Smar_0891|Staphylothermus marinus (strain

Query: 3 GGKDIT 8
GGKD+T
Sbjct: 129 GGKDVT 134


>sp|NADK_THEVO|NAD kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GKDITE 9
GKDITE
Sbjct: 45 GKDITE 50


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NQGGKDI 7
N GGKD+
Sbjct: 1466 NNGGKDV 1472




39|Sequence|191|200|DITEEIMSGA

>sp|CSG_HALVD|CELL surface glycoprotein|Haloferax volcanii (strain ATCC 29605

Query: 1 DITEEIMSG 9
DIT E++SG
Sbjct: 176 DITNEVLSG 184


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 DITEEIMSGA 10
D+ EE+ SGA
Sbjct: 360 DVVEELKSGA 369


>sp|NTPTH_PYRFU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ITEEIMSGA 10
IT+EI SGA
Sbjct: 38 ITQEIRSGA 46


>sp|Y1902_METTH|UPF0173 metal-dependent hydrolase MTH_1902|Methanothermobacter

Query: 1 DITEEIMSGA 10
D TEE+ SG
Sbjct: 113 DFTEEVTSGG 122


>sp|NCPP_METKA|PROBABLE inosine/xanthosine triphosphatase|Methanopyrus kandleri (strain

Query: 1 DITEEIMSG 9
D+TEE +SG
Sbjct: 110 DVTEEALSG 118


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 ITEEIMSGA 10
I EEI SGA
Sbjct: 360 IVEEIKSGA 368


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 ITEEIMSGA 10
I EEI SGA
Sbjct: 360 IVEEIKSGA 368


>sp|OTC_METAC|ORNITHINE carbamoyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DITEEIMSG 9
+IT+E+M G
Sbjct: 269 EITDEVMDG 277




40|Sequence|196|205|IMSGARTAST

>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 1 IMSGARTAS 9
+++GARTAS
Sbjct: 584 VIAGARTAS 592




41|Sequence|201|210|RTASTPTPPQ

>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 TASTPTP 8
TA TPTP
Sbjct: 45 TAMTPTP 51


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 RTASTPTPPQ 10
R TPTPP+
Sbjct: 729 RFTKTPTPPE 738


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 3 ASTPTPPQ 10
AS P PPQ
Sbjct: 409 ASVPNPPQ 416


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 2 TASTPTPPQ 10
T S P PP+
Sbjct: 12 TVSVPVPPE 20


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TASTPTP 8
TA TPTP
Sbjct: 46 TAMTPTP 52


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 1 RTASTPTPP 9
++ STP PP
Sbjct: 9 KSVSTPCPP 17


>sp|PANB_HYPBU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 5 TPTPP 9
TPTPP
Sbjct: 226 TPTPP 230


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 1 RTASTPTPP 9
++ STP PP
Sbjct: 6 KSVSTPCPP 14




42|Sequence|206|215|PTPPQTGGGL

>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 1 PTPPQTGGGL 10
PT P TGG L
Sbjct: 83 PTSPFTGGAL 92


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PTPPQTGGGL 10
PT P TGG L
Sbjct: 85 PTSPFTGGAL 94


>sp|DMO1_DESMO|HOMING endonuclease I-DmoI|Desulfurococcus mucosus (Desulfurococcus

Query: 1 PTPPQTGGG 9
P PP+ GG
Sbjct: 184 PLPPERAGG 192


>sp|HIS4_META3|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus aeolicus (strain

Query: 1 PTPPQTGGGL 10
P P + GGG+
Sbjct: 74 PVPVEVGGGV 83


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 3 PPQTGGGL 10
PP GGGL
Sbjct: 72 PPFIGGGL 79


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 3 PPQTGGGL 10
PP GGGL
Sbjct: 72 PPFLGGGL 79


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TPPQTGGGL 10
TPP GGL
Sbjct: 270 TPPGATGGL 278


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 1 PTPPQTGG 8
PT P+ GG
Sbjct: 405 PTSPRDGG 412


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 PTPPQTGGGL 10
P PP+TG L
Sbjct: 271 PLPPKTGSWL 280


>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PTPPQTGGGL 10
P PP+TG L
Sbjct: 272 PLPPKTGSWL 281


>sp|HISX_SACS2|HISTIDINOL dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PPQTGGG 9
PP GGG
Sbjct: 89 PPNIGGG 95


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 PTPPQTGGGL 10
P PP TG L
Sbjct: 586 PVPPVTGSEL 595


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 3 PPQTGGG 9
PP +GGG
Sbjct: 119 PPLSGGG 125


>sp|SYY1_PYRAE|TYROSINE--TRNA ligase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PPQTGGGL 10
PPQ GG +
Sbjct: 306 PPQYGGDI 313


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PTPPQTGGGL 10
P PP+ GGL
Sbjct: 531 PPPPKYSGGL 540


>sp|CRYD_NATPD|CRYPTOCHROME DASH|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PPQTGG 8
PP+TGG
Sbjct: 48 PPKTGG 53


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PTPPQTGGGL 10
P PP+ GGL
Sbjct: 531 PPPPKYKGGL 540


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PTPPQTGGGL 10
P PP+ GGL
Sbjct: 531 PPPPKYKGGL 540


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 1 PTPPQTGGGL 10
PTP + GGL
Sbjct: 82 PTPISSVGGL 91


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PTPPQTGGGL 10
P PP+ GGL
Sbjct: 531 PPPPKYKGGL 540




43|Sequence|211|220|TGGGLEPQAN

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 GGGLEPQAN 10
GGG EP AN
Sbjct: 4387 GGGFEPIAN 4395


Query: 2 GGGLEPQAN 10
G G EP AN
Sbjct: 5542 GSGFEPIAN 5550


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GGLEPQ 8
GGLEPQ
Sbjct: 156 GGLEPQ 161


>sp|RADA_THEVO|DNA repair and recombination protein|Thermoplasma volcanium (strain

Query: 2 GGGLEPQA 9
GGGLE QA
Sbjct: 102 GGGLETQA 109


>sp|RADA_METMJ|DNA repair and recombination protein|Methanoculleus marisnigri (strain

Query: 1 TGGGLEPQA 9
GGGLE QA
Sbjct: 93 VGGGLETQA 101


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 2 GGGLEPQA 9
GGG+E QA
Sbjct: 133 GGGIETQA 140


>sp|Y415_METJA|UNCHARACTERIZED protein MJ0415|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGGLEP 7
GGGL+P
Sbjct: 106 GGGLQP 111


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 2 GGGLEPQA 9
GGG+E QA
Sbjct: 130 GGGIETQA 137


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 2 GGGLEPQA 9
GGGLE Q+
Sbjct: 123 GGGLESQS 130


>sp|RADA_THEAC|DNA repair and recombination protein|Thermoplasma acidophilum (strain

Query: 2 GGGLEPQA 9
GGGLE QA
Sbjct: 102 GGGLETQA 109


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain ATCC

Query: 3 GGLEPQ 8
GGLEP+
Sbjct: 385 GGLEPE 390


>sp|RADA_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 2 GGGLEPQA 9
GGG+E QA
Sbjct: 91 GGGIETQA 98


>sp|RADA_METVO|DNA repair and recombination protein|Methanococcus voltae

Query: 2 GGGLEPQA 9
GGGLE Q+
Sbjct: 92 GGGLESQS 99


>sp|RADA_PICTO|DNA repair and recombination protein|Picrophilus torridus (strain ATCC

Query: 2 GGGLEPQA 9
GGGLE Q+
Sbjct: 101 GGGLETQS 108


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 GGLEPQAN 10
GG EP+ N
Sbjct: 231 GGAEPELN 238


>sp|RADA_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 2 GGGLEPQA 9
GGG+E QA
Sbjct: 129 GGGIETQA 136


>sp|RADA_METBF|DNA repair and recombination protein|Methanosarcina barkeri (strain

Query: 2 GGGLEPQA 9
GGG+E QA
Sbjct: 94 GGGIETQA 101


>sp|RADA_METMA|DNA repair and recombination protein|Methanosarcina mazei (strain ATCC

Query: 2 GGGLEPQA 9
GGG+E QA
Sbjct: 94 GGGIETQA 101


>sp|RADA_CENSY|DNA repair and recombination protein|Cenarchaeum symbiosum (strain A)

Query: 2 GGGLEPQA 9
GGG+E QA
Sbjct: 101 GGGIETQA 108


>sp|RADA_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 2 GGGLEPQA 9
GGG+E QA
Sbjct: 125 GGGIETQA 132


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 2 GGGLEPQA 9
GGG+E QA
Sbjct: 102 GGGVETQA 109


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 2 GGGLEPQA 9
GGGLE Q+
Sbjct: 94 GGGLETQS 101




44|Sequence|216|225|EPQANGETPQ

>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 1 EPQANGETPQ 10
E +A+GETPQ
Sbjct: 205 EVKADGETPQ 214


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 EPQANGETPQ 10
E ANG PQ
Sbjct: 829 EDYANGRDPQ 838


>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EPQANGETP 9
+PQ+N +TP
Sbjct: 329 DPQSNDDTP 337


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 1 EPQANGET 8
E Q NGET
Sbjct: 476 EKQVNGET 483


>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM

Query: 2 PQANGETP 9
P NG TP
Sbjct: 15 PDKNGNTP 22


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 2 PQANGETPQ 10
P NGETP
Sbjct: 490 PFVNGETPH 498




45|Sequence|221|230|GETPQVAVIV

>sp|NNR_METKA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanopyrus kandleri (strain

Query: 1 GETPQVAV 8
GETP VAV
Sbjct: 170 GETPDVAV 177


>sp|SYY_HALSA|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GETPQVAVIV 10
GETP+V+ +V
Sbjct: 144 GETPKVSHVV 153


>sp|SYY_HALS3|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GETPQVAVIV 10
GETP+V+ +V
Sbjct: 144 GETPKVSHVV 153


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 2 ETPQVAVIV 10
E P++AVIV
Sbjct: 22 ENPKLAVIV 30


>sp|DPCKG_HALS3|GTP-DEPENDENT dephospho-CoA kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GETPQVAVI 9
G+TP VAV+
Sbjct: 55 GQTPAVAVV 63


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GETPQVAVIV 10
GE P+ ++IV
Sbjct: 137 GEVPETSIIV 146


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GETPQVAVIV 10
GE P+ ++IV
Sbjct: 137 GEVPETSIIV 146


>sp|PURO_METM5|IMP cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 3 TPQVAVIV 10
TP++AV++
Sbjct: 110 TPRIAVVI 117




46|Sequence|226|235|VAVIVRPDDR

>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VAVIVRPDD 9
VAV+V PDD
Sbjct: 225 VAVVVHPDD 233


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 AVIVRPDD 9
A+IV PDD
Sbjct: 214 AIIVHPDD 221


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VAVIVRPDD 9
VAV V PDD
Sbjct: 220 VAVFVHPDD 228


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VAVIVRPDD 9
VAV V PDD
Sbjct: 220 VAVFVHPDD 228


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VAVIVRPDD 9
VAV V PDD
Sbjct: 220 VAVFVHPDD 228


>sp|AATE3_METHJ|A-TYPE ATP synthase subunit E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VAVIVRPDDR 10
+AV V PDDR
Sbjct: 122 IAVKVHPDDR 131


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VAVIVRPDD 9
VAV V PDD
Sbjct: 258 VAVFVHPDD 266


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VAVIVRPDD 9
VAVI PDD
Sbjct: 224 VAVIFHPDD 232


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VAVIVRPDD 9
VAV V PDD
Sbjct: 217 VAVFVNPDD 225


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VAVIVRPDD 9
VA+ V PDD
Sbjct: 217 VAIAVHPDD 225


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VAVIVRPDDR 10
VAV V P+D+
Sbjct: 220 VAVAVNPEDK 229


>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 IVRPDDR 10
++RPDD+
Sbjct: 10 LIRPDDK 16


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VAVIVRPDD 9
VAV V PDD
Sbjct: 240 VAVAVHPDD 248


>sp|CAS1B_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 AVIVRPDDR 10
A++VR D+R
Sbjct: 96 AIVVRKDNR 104


>sp|RLME_METMJ|RIBOSOMAL RNA large subunit methyltransferase|Methanoculleus marisnigri

Query: 4 IVRPDD 9
I+RPDD
Sbjct: 36 IIRPDD 41


>sp|RLME_METHJ|RIBOSOMAL RNA large subunit methyltransferase|Methanospirillum hungatei

Query: 4 IVRPDD 9
++RPDD
Sbjct: 36 VIRPDD 41


>sp|THSB_HALSA|THERMOSOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 VAVIVRPDDR 10
VAV V PDD+
Sbjct: 145 VAVDVDPDDK 154


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VAVIVRPDD 9
VAV V P+D
Sbjct: 220 VAVFVHPED 228


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VAVIVRPDD 9
VA++V P+D
Sbjct: 222 VAILVHPED 230


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 AVIVRPDD 9
AV V PDD
Sbjct: 256 AVAVNPDD 263


>sp|RL11_META3|LARGE ribosomal subunit protein uL11|Methanococcus aeolicus (strain

Query: 1 VAVIVRPDDR 10
V VIV DDR
Sbjct: 53 VKVIVNTDDR 62


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VAVIVRPDD 9
VAV V P+D
Sbjct: 220 VAVAVNPED 228




47|Sequence|231|240|RPDDRSQGAI

>sp|TRMY_METLZ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocorpusculum

Query: 2 PDDRSQGAI 10
PD+RS GA+
Sbjct: 82 PDERSAGAL 90


>sp|TRMY_METBU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcoides

Query: 2 PDDRSQGAI 10
PD+RS G++
Sbjct: 78 PDERSAGSL 86


>sp|TRMY_METMA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanosarcina mazei

Query: 2 PDDRSQGAI 10
PD+RS G++
Sbjct: 78 PDERSSGSL 86


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 RPDDRSQG 8
RP+D +QG
Sbjct: 703 RPNDTTQG 710


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 RPDDRSQG 8
RP+D +QG
Sbjct: 704 RPNDTNQG 711


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 RPDDRSQG 8
RP D +QG
Sbjct: 701 RPSDNTQG 708


>sp|TRMY_METAC|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanosarcina

Query: 2 PDDRSQGAI 10
PD+RS G++
Sbjct: 78 PDERSSGSL 86




48|Sequence|236|245|SQGAIIADRP

>sp|SUCD_METTH|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanothermobacter

Query: 3 GAIIADRP 10
GA++ DRP
Sbjct: 272 GAVVVDRP 279


>sp|OGT_PYRAE|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QGAIIADRP 10
+GA+ DRP
Sbjct: 117 EGALCGDRP 125


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SQGAIIADR 9
+Q AIIADR
Sbjct: 858 AQEAIIADR 866


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 1 SQGAIIADRP 10
S+G +IAD P
Sbjct: 342 SEGKVIADLP 351


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 1 SQGAIIADRP 10
S+G +IAD P
Sbjct: 342 SEGEVIADLP 351


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 5 IIADRP 10
IIADRP
Sbjct: 357 IIADRP 362




49|Sequence|241|250|IADRPGLPGP

>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 IADRPGLPG 9
+AD PGLPG
Sbjct: 3 VADVPGLPG 11


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 IADRPGLPG 9
+AD PGLPG
Sbjct: 3 VADVPGLPG 11


>sp|PTFC_HALVD|PTS system fructose-specific EIIC component|Haloferax volcanii

Query: 1 IADRPGL 7
IADRPGL
Sbjct: 88 IADRPGL 94


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IADRPGLPGP 10
I RPGLP P
Sbjct: 99 IVTRPGLPVP 108


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IADRPGLPGP 10
+A+R GLP P
Sbjct: 79 LAERAGLPTP 88


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PGLPG 9
PGLPG
Sbjct: 283 PGLPG 287


>sp|Y1213_METKA|UPF0237 protein MK1213|Methanopyrus kandleri (strain AV19 /

Query: 2 ADRPGL 7
ADRPG+
Sbjct: 11 ADRPGI 16


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 1 IADRPGLPGP 10
+ D+PG GP
Sbjct: 265 LPDKPGASGP 274


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 RPGLPGP 10
RPG P P
Sbjct: 509 RPGRPSP 515


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 RPGLPGP 10
RPG P P
Sbjct: 509 RPGRPSP 515


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 RPGLPGP 10
RPG P P
Sbjct: 509 RPGRPSP 515


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 RPGLPGP 10
RPG P P
Sbjct: 509 RPGRPSP 515


>sp|TRMBR_HALSA|HTH-TYPE sugar sensing transcriptional regulator|Halobacterium salinarum

Query: 1 IADRPGLPGP 10
IADR +P P
Sbjct: 41 IADRTDIPQP 50


>sp|GUAAB_NATPD|GMP synthase [glutamine-hydrolyzing] subunit B|Natronomonas pharaonis

Query: 1 IADRPGLPGP 10
IA+R PGP
Sbjct: 182 IAERMPFPGP 191


>sp|Y1656_ARCFU|UNCHARACTERIZED protein AF_1656|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IADRPGLP 8
I D PG+P
Sbjct: 76 IVDAPGIP 83


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 RPGLPGP 10
RPG P P
Sbjct: 513 RPGRPSP 519


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 1 IADRPGLPG 9
IA+RP L G
Sbjct: 262 IAERPALHG 270


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IADRPGLPGP 10
+A PGLP P
Sbjct: 92 VASNPGLPMP 101


>sp|PTH_HALMA|PEPTIDYL-TRNA hydrolase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IADRPGLP 8
+A+R GLP
Sbjct: 65 VAEREGLP 72


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ADRPGLPGP 10
A++P PGP
Sbjct: 474 AEKPESPGP 482


>sp|GATD_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 4 RPGLPG 9
RPG PG
Sbjct: 54 RPGTPG 59




50|Sequence|246|255|GLPGPEHSPS

>sp|KITH_PYRAE|THYMIDINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLPGPEHSP 9
G+P P HSP
Sbjct: 155 GVPAPRHSP 163


>sp|AROB_PYRCJ|3-DEHYDROQUINATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GLPGPEHSPS 10
GLP P PS
Sbjct: 37 GLPSPLEGPS 46


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLPGPEHSP 9
G+P PE P
Sbjct: 176 GMPEPEKDP 184


>sp|ENDA_SULAC|TRNA-SPLICING endonuclease|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PGPEHSP 9
PG EH+P
Sbjct: 122 PGLEHAP 128


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 LPGPEH 7
LPGP+H
Sbjct: 233 LPGPQH 238


>sp|IPK_THEAC|ISOPENTENYL phosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GLPGPEHSPS 10
GLPGP++ S
Sbjct: 57 GLPGPKNPRS 66


>sp|RISC_METTM|RIBOFLAVIN synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 GLPGPE 6
G+PGPE
Sbjct: 64 GMPGPE 69


>sp|RISC_METTH|RIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GLPGPE 6
G+PGPE
Sbjct: 64 GMPGPE 69


>sp|ARAT1_THELN|AROMATIC-AMINO-ACID aminotransferase 1|Thermococcus litoralis (strain ATCC 51850

Query: 1 GLPGPEHSP 9
GLP PE P
Sbjct: 52 GLPAPETFP 60


>sp|Y830_PYRAE|PROTEIN PAE0830|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLPGPEHSP 9
GLP PE P
Sbjct: 20 GLPVPESHP 28


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 2 LPGPEHSPS 10
+P PEH P+
Sbjct: 198 IPTPEHDPN 206


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 2 LPGPEH 7
LP PEH
Sbjct: 402 LPDPEH 407


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PGPEHSP 9
P P+H P
Sbjct: 327 PAPKHEP 333


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 GLPGPEH 7
G P PEH
Sbjct: 682 GEPAPEH 688


>sp|IDI2_IGNH4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GLPGPEH 7
G P PEH
Sbjct: 326 GSPAPEH 332


>sp|ARGB_METAC|ACETYLGLUTAMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LPGPEHSP 9
L GP+H P
Sbjct: 291 LYGPDHPP 298


>sp|AGL10_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl10|Haloferax volcanii

Query: 1 GLPGPEHS 8
LPG EH+
Sbjct: 157 ALPGKEHN 164


>sp|PYLD_METBF|PYRROLYSINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GLPGPEH 7
G PG EH
Sbjct: 157 GFPGAEH 163


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 GLPGPEHSP 9
G P P+ SP
Sbjct: 521 GAPAPQESP 529


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GLPGPEH 7
G+P PEH
Sbjct: 193 GMPYPEH 199


>sp|MUTL_HALSA|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 5 PEHSPS 10
PEHSP+
Sbjct: 353 PEHSPT 358


>sp|MUTL_HALS3|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 5 PEHSPS 10
PEHSP+
Sbjct: 353 PEHSPT 358


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LPGPEH 7
PGP+H
Sbjct: 227 FPGPQH 232


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 LPGPEH 7
PGP+H
Sbjct: 227 FPGPQH 232


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LPGPEHSPS 10
+P PEH+ S
Sbjct: 653 IPYPEHNQS 661


>sp|HMGCS_METMA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLPGPEH 7
G+P PEH
Sbjct: 193 GMPYPEH 199


>sp|HMGCS_METAC|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GLPGPEH 7
G+P PEH
Sbjct: 193 GMPYPEH 199


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GLPGPEH 7
G+P PEH
Sbjct: 193 GMPYPEH 199


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GLPGPEH 7
G+P PEH
Sbjct: 190 GIPYPEH 196


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 LPGPEHSPS 10
+P PEH+ S
Sbjct: 655 IPYPEHNQS 663




51|Sequence|251|260|EHSPSESQPS

>sp|ILVH_METTH|PROBABLE acetolactate synthase small subunit|Methanothermobacter

Query: 2 HSPSESQPS 10
H+PSES+ S
Sbjct: 98 HAPSESERS 106


>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 4 PSESQPS 10
PSESQP+
Sbjct: 128 PSESQPA 134


>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 1 EHSPSESQP 9
E PSES+P
Sbjct: 221 EAMPSESRP 229




52|Sequence|256|265|ESQPSSPSPT

>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SQPSSPSP 9
S+P+SPSP
Sbjct: 503 SRPTSPSP 510


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ESQPSSPSP 9
+S+P++PSP
Sbjct: 515 KSRPTNPSP 523


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ESQPSSPSP 9
+S+P SPSP
Sbjct: 510 KSRPLSPSP 518


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 PSSPSP 9
PSSP+P
Sbjct: 50 PSSPTP 55


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 PSSPSP 9
PSSP+P
Sbjct: 50 PSSPTP 55


>sp|Y1533_ARCFU|UNCHARACTERIZED transporter AF_1533|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QPSSPSP 9
QPSS SP
Sbjct: 233 QPSSTSP 239


>sp|TRPC_METJA|INDOLE-3-GLYCEROL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ESQPSSPS 8
E +PSSPS
Sbjct: 63 EIKPSSPS 70


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 1 ESQPSSPSP 9
+S+P+ PSP
Sbjct: 502 KSRPTRPSP 510


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ESQPSSPSP 9
+S+P +PSP
Sbjct: 511 KSRPLAPSP 519


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 ESQPSSPSP 9
+S+P PSP
Sbjct: 512 KSRPGDPSP 520


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ESQPSSPSP 9
+S+P PSP
Sbjct: 507 KSRPGRPSP 515


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PSSPSPT 10
P SP+PT
Sbjct: 546 PGSPNPT 552


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 SQPSSPSP 9
S P+ PSP
Sbjct: 503 SSPTKPSP 510


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ESQPSSPSP 9
+S+P PSP
Sbjct: 507 KSRPGRPSP 515


>sp|HAC8_HALAS|PRE-PROTEIN-C8 sp. (strain AS7092)

Query: 1 ESQPSSPSPT 10
ES PS+ +PT
Sbjct: 196 ESSPSNAAPT 205




53|Sequence|261|270|SPSPTPSPSP

>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 SPTPSPSP 10
+PTP+P P
Sbjct: 153 NPTPAPEP 160


Query: 1 SPSPTPSPS 9
+P+P P P+
Sbjct: 153 NPTPAPEPA 161


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SPSPTPSPS 9
SP P P+PS
Sbjct: 518 SPGPLPAPS 526


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 1 SPSPTPSPS 9
+P+PTPSPS
Sbjct: 439 TPTPTPSPS 447




54|Sequence|266|275|PSPSPVLEPG

>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 2 SPSPVLEPG 10
SPS +LEPG
Sbjct: 374 SPSKILEPG 382


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 PSPSPVLEPG 10
P+PSPV EPG
Sbjct: 357 PTPSPVGEPG 366


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 2 SPSPVLEPG 10
SPS +LEPG
Sbjct: 374 SPSEILEPG 382


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 2 SPSPVLEPG 10
SPS +LEPG
Sbjct: 374 SPSEILEPG 382


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 2 SPSPVLEPG 10
SPS +LEPG
Sbjct: 374 SPSEILEPG 382


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 2 SPSPVLEPG 10
SPS +LEPG
Sbjct: 374 SPSEILEPG 382


>sp|TRUD_THEON|PROBABLE tRNA pseudouridine synthase D|Thermococcus onnurineus (strain NA1)

Query: 3 PSPVLEPG 10
P P+ EPG
Sbjct: 364 PKPMAEPG 371


>sp|HPRL2_HALWD|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16790

Query: 5 PVLEPG 10
PVLEPG
Sbjct: 31 PVLEPG 36


>sp|HPRL2_HALWC|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16854

Query: 5 PVLEPG 10
PVLEPG
Sbjct: 31 PVLEPG 36


>sp|TRUD_THEKO|PROBABLE tRNA pseudouridine synthase D|Thermococcus kodakarensis (strain

Query: 3 PSPVLEPG 10
P P+ EPG
Sbjct: 364 PKPMAEPG 371


>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 1 PSPSPVLEPG 10
P SPV EPG
Sbjct: 92 PLASPVFEPG 101


>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 3 PSPVLEPG 10
P P+ EPG
Sbjct: 363 PKPMAEPG 370


>sp|HPRL1_HALVD|HGPRTASE-LIKE protein 1|Haloferax volcanii (strain ATCC 29605

Query: 5 PVLEPG 10
P+LEPG
Sbjct: 31 PMLEPG 36


>sp|TRUD_PYRAB|PROBABLE tRNA pseudouridine synthase D|Pyrococcus abyssi (strain GE5 /

Query: 3 PSPVLEPG 10
P P+ EPG
Sbjct: 356 PKPMREPG 363


>sp|HPRL_HALBP|HGPRTASE-LIKE protein|Halogeometricum borinquense (strain ATCC 700274

Query: 5 PVLEPG 10
P+LEPG
Sbjct: 31 PMLEPG 36


>sp|RRP42_PYRFU|EXOSOME complex component Rrp42|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PSPSPVLEPG 10
P SP EPG
Sbjct: 88 PLASPTFEPG 97


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PSPSPVLEP 9
P P PV P
Sbjct: 120 PMPKPVTNP 128


>sp|TRUD_PYRFU|PROBABLE tRNA pseudouridine synthase D|Pyrococcus furiosus (strain ATCC

Query: 3 PSPVLEPG 10
P P+ EPG
Sbjct: 357 PKPMREPG 364


>sp|SYD_THEAC|ASPARTATE--TRNA(ASP) ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PSPSPVLEP 9
P P PV++P
Sbjct: 100 PLPLPVVDP 108


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 2 SPSPVLEP 9
+PSP++ P
Sbjct: 242 APSPIMTP 249


>sp|SYD_THEVO|ASPARTATE--TRNA(ASP) ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PSPSPVLEP 9
P P PV++P
Sbjct: 100 PLPLPVIDP 108


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 3 PSPVLEPG 10
P P+ EPG
Sbjct: 358 PKPMREPG 365


>sp|RRP42_METTH|EXOSOME complex component Rrp42|Methanothermobacter thermautotrophicus

Query: 1 PSPSPVLEPG 10
P SP EPG
Sbjct: 89 PMASPTFEPG 98


>sp|PNPH_KORCO|PROBABLE 6-oxopurine nucleoside phosphorylase|Korarchaeum cryptofilum

Query: 2 SPSPVLEPG 10
S +P LEPG
Sbjct: 85 SINPALEPG 93




55|Sequence|271|280|VLEPGSEPNL

>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 2 LEPGSEPNL 10
L PGS PN+
Sbjct: 103 LRPGSSPNV 111


>sp|PSB1_AERPE|PROTEASOME subunit beta 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 LEPGSEPNL 10
++PG EP L
Sbjct: 109 IDPGGEPKL 117


>sp|DFX_ARCFU|DESULFOFERRODOXIN homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LEPGSEP 8
L+PG EP
Sbjct: 93 LKPGDEP 99


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 EPGSEP 8
EPGS+P
Sbjct: 215 EPGSDP 220


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 EPGSEP 8
EPGS+P
Sbjct: 230 EPGSDP 235


>sp|PYRDB_THEAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma acidophilum

Query: 2 LEPGSEPNL 10
LE GS+P+L
Sbjct: 136 LEVGSDPDL 144


>sp|SYT_PYRFU|THREONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EPGSEP 8
EPGS+P
Sbjct: 220 EPGSDP 225


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 4 PGSEPNL 10
PG +PNL
Sbjct: 174 PGKDPNL 180


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 4 PGSEPNL 10
PG +PNL
Sbjct: 174 PGKDPNL 180


>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 EPGSEP 8
EPGS+P
Sbjct: 222 EPGSDP 227


>sp|AMPPA_METMJ|AMP phosphorylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VLEPGSEPN 9
VLE +EPN
Sbjct: 341 VLEGATEPN 349


>sp|SYT_PYRHO|THREONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EPGSEP 8
EPGS+P
Sbjct: 220 EPGSDP 225


>sp|SYT_PYRAB|THREONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 EPGSEP 8
EPGS+P
Sbjct: 220 EPGSDP 225


>sp|PYRDB_THEVO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma volcanium (strain

Query: 2 LEPGSEPNL 10
LE GS+P+L
Sbjct: 136 LEVGSDPDL 144


>sp|IXTPA_METAC|DITP/XTP pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EPGSEP 8
EPG EP
Sbjct: 116 EPGKEP 121


>sp|AMPPA_METB6|AMP phosphorylase|Methanoregula boonei (strain DSM 21154

Query: 1 VLEPGSEPN 9
VLE +EPN
Sbjct: 342 VLEGATEPN 350




56|Sequence|276|285|SEPNLAVLSI

>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 1 SEPNLAVLS 9
++PNL VLS
Sbjct: 30 NQPNLRVLS 38


>sp|IF2B_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 SEPNLAVLSI 10
S PNL +LSI
Sbjct: 29 SLPNLIILSI 38




57|Sequence|281|290|AVLSIPGDTM

>sp|CSG1_HALHT|CELL surface glycoprotein 1|Haloarcula hispanica (strain ATCC 33960

Query: 2 VLSIPGD 8
VLS+PGD
Sbjct: 398 VLSVPGD 404


>sp|MRE11_SACS2|DNA double-strand break repair protein|Saccharolobus solfataricus

Query: 3 LSIPGD 8
LSIPGD
Sbjct: 80 LSIPGD 85


>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 2 VLSIPGD 8
VL++PGD
Sbjct: 399 VLTVPGD 405


>sp|Y828_METBU|UPF0210 protein Mbur_0828|Methanococcoides burtonii (strain DSM 6242

Query: 2 VLSIPGDT 9
+++IPGDT
Sbjct: 369 MIAIPGDT 376


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VLSIPGD 8
+LS+PGD
Sbjct: 302 ILSMPGD 308


>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VLSIPGDT 9
+++IPGDT
Sbjct: 370 MIAIPGDT 377


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 2 VLSIPGD 8
+LS+PGD
Sbjct: 302 ILSMPGD 308


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 2 VLSIPGD 8
+LS+PGD
Sbjct: 302 ILSMPGD 308


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 2 VLSIPGD 8
+LS+PGD
Sbjct: 302 ILSMPGD 308


>sp|PDXT_PYRNV|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum neutrophilum

Query: 1 AVLSIPG 7
AVL+IPG
Sbjct: 45 AVLAIPG 51


>sp|Y1665_METJA|UPF0210 protein MJ1665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VLSIPGDT 9
+++IPGDT
Sbjct: 374 MVAIPGDT 381


>sp|DPCKG_CALMQ|GTP-DEPENDENT dephospho-CoA kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 AVLSIPGDT 9
AVL PG+T
Sbjct: 139 AVLEAPGNT 147


>sp|Y1691_METAC|UPF0210 protein MA_1691|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VLSIPGDT 9
++++PGDT
Sbjct: 380 MIAVPGDT 387




58|Sequence|286|295|PGDTMTTIQM

>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 PGDTMT 6
PGDT+T
Sbjct: 331 PGDTVT 336


>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 2 GDTMTTI 8
GDT TTI
Sbjct: 182 GDTRTTI 188


>sp|CBIN_HALSA|COBALT transport protein CbiN|Halobacterium salinarum (strain ATCC

Query: 2 GDTMTTI 8
GDT+TTI
Sbjct: 34 GDTITTI 40


>sp|CBIN_HALS3|COBALT transport protein CbiN|Halobacterium salinarum (strain ATCC 29341

Query: 2 GDTMTTI 8
GDT+TTI
Sbjct: 34 GDTITTI 40




59|Sequence|291|300|TTIQMSVEES

***** No hits found ******


60|Sequence|296|305|SVEESTPISR

>sp|COBS_HALWD|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VEESTPIS 9
++ESTP+S
Sbjct: 173 IDESTPLS 180


>sp|LYSZ_SACI1|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 VEESTPIS 9
VEESTP++
Sbjct: 160 VEESTPLN 167


>sp|LYSZ_SACI7|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VEESTPIS 9
VEESTP++
Sbjct: 160 VEESTPLN 167


>sp|LYSZ_SACI6|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VEESTPIS 9
VEESTP++
Sbjct: 160 VEESTPLN 167


>sp|LYSZ_SACI4|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VEESTPIS 9
VEESTP++
Sbjct: 160 VEESTPLN 167


>sp|LYSZ_SACI3|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 VEESTPIS 9
VEESTP++
Sbjct: 160 VEESTPLN 167


>sp|LYSZ_SACI2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VEESTPIS 9
VEESTP++
Sbjct: 160 VEESTPLN 167




61|Sequence|301|310|TPISRETGEP

>sp|OFOB1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 2 PISRETGEP 10
PISRE G P
Sbjct: 289 PISREDGSP 297


>sp|PDXS_PYRFU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus furiosus (strain ATCC

Query: 3 ISRETGEP 10
ISRE GEP
Sbjct: 310 ISREIGEP 317


>sp|PDXS_PYRHO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus horikoshii (strain

Query: 3 ISRETGEP 10
ISRE GEP
Sbjct: 310 ISREIGEP 317


>sp|PDXS_PYRAB|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus abyssi (strain GE5 /

Query: 3 ISRETGEP 10
ISRE GEP
Sbjct: 310 ISREIGEP 317


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 1 TPISRETG 8
TP+S+ETG
Sbjct: 202 TPVSKETG 209


>sp|DCDA_ARCFU|DIAMINOPIMELATE decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TPISRETGEP 10
T I RETG P
Sbjct: 17 TEIVRETGTP 26


>sp|PGK_PICTO|PHOSPHOGLYCERATE kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 TPISRETGE 9
+P++ ETGE
Sbjct: 26 SPVNPETGE 34


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TPISRETGEP 10
T I+RE G P
Sbjct: 434 TAIAREAGAP 443


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 TPISRETGEP 10
T I+RE G P
Sbjct: 434 TAIAREAGAP 443


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TPISRETGEP 10
T I+RE G P
Sbjct: 434 TAIAREAGAP 443


>sp|PDXS_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus kodakarensis

Query: 3 ISRETGEP 10
IS+E GEP
Sbjct: 310 ISKEIGEP 317


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 ISRETGEP 10
I +ETGEP
Sbjct: 268 IKKETGEP 275


>sp|PDXS_THEON|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus onnurineus (strain

Query: 3 ISRETGEP 10
IS+E GEP
Sbjct: 310 ISKEIGEP 317


>sp|PDXS_THEGJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus gammatolerans

Query: 3 ISRETGEP 10
IS+E GEP
Sbjct: 310 ISKEIGEP 317


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 1 TPISRETGE 9
P+S ETGE
Sbjct: 205 VPVSAETGE 213


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 4 SRETGEP 10
RETGEP
Sbjct: 327 DRETGEP 333


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 2 PISRETGE 9
PIS +TGE
Sbjct: 196 PISAKTGE 203


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 1 TPISRETGEP 10
++RE GEP
Sbjct: 203 AAVAREEGEP 212


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 TPISRETGEP 10
++RE GEP
Sbjct: 203 AAVAREEGEP 212


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 2 PISRETGE 9
P+S ETGE
Sbjct: 204 PVSAETGE 211


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 2 PISRETGE 9
P+S ETGE
Sbjct: 204 PVSAETGE 211


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PISRET 7
PISRET
Sbjct: 224 PISRET 229


>sp|IF2P_IGNH4|PROBABLE translation initiation factor IF-2|Ignicoccus hospitalis (strain

Query: 1 TPISRETGE 9
PIS +TGE
Sbjct: 205 VPISAKTGE 213




62|Sequence|306|315|ETGEPYRLSP

>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ETGEPYRLS 9
ETGEPYR++
Sbjct: 309 ETGEPYRIA 317


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 ETGEPYRLS 9
ETG+PY LS
Sbjct: 112 ETGKPYGLS 120


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 ETGEPYR 7
ETGEPYR
Sbjct: 271 ETGEPYR 277


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ETGEPYR 7
ETGEP+R
Sbjct: 309 ETGEPFR 315


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ETGEPYRLSP 10
++GEPY SP
Sbjct: 187 KSGEPYWKSP 196


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 1 ETGEPYRLSP 10
ETGE YR+ P
Sbjct: 95 ETGEHYRVLP 104


>sp|METXA_HALMA|HOMOSERINE O-acetyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ETGEPY 6
ETGEPY
Sbjct: 106 ETGEPY 111


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ETGEPYRLS 9
E GEPY+++
Sbjct: 309 EKGEPYKIA 317


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 EPYRLSP 10
+PY+LSP
Sbjct: 146 DPYKLSP 152


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ETGEPYRLS 9
E GEPY+++
Sbjct: 309 ERGEPYKIA 317


>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 1 ETGEPYRLSP 10
ETGE YR+ P
Sbjct: 95 ETGEHYRVLP 104


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 1 ETGEPYRLSP 10
ETGE YR+ P
Sbjct: 95 ETGEHYRVLP 104


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 1 ETGEPYRLSP 10
ETGE YR+ P
Sbjct: 95 ETGEHYRVLP 104


>sp|NOB1_METTH|ENDORIBONUCLEASE Nob1|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ETGEPYRLSP 10
E+G+ RLSP
Sbjct: 76 ESGDIMRLSP 85


>sp|RS4E_STAMF|SMALL ribosomal subunit protein eS4|Staphylothermus marinus (strain ATCC

Query: 1 ETGEPYRLSP 10
+TGE YR+ P
Sbjct: 95 DTGETYRVIP 104


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 2 TGEPYRLSP 10
TGE YR+ P
Sbjct: 91 TGEVYRVVP 99


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GEPYRLSP 10
GEP RL+P
Sbjct: 93 GEPGRLAP 100


>sp|RS4E_PYRNV|SMALL ribosomal subunit protein eS4|Pyrobaculum neutrophilum (strain

Query: 2 TGEPYRLSP 10
TGE YR+ P
Sbjct: 91 TGEIYRVVP 99


>sp|RS4E_PYRCJ|SMALL ribosomal subunit protein eS4|Pyrobaculum calidifontis (strain

Query: 2 TGEPYRLSP 10
TGE YR+ P
Sbjct: 91 TGEIYRVVP 99


>sp|AROA_THEVO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma volcanium (strain ATCC

Query: 1 ETGEPYRLS 9
E+G YRLS
Sbjct: 85 ESGTSYRLS 93


>sp|RS4E_PYRAE|SMALL ribosomal subunit protein eS4|Pyrobaculum aerophilum (strain ATCC

Query: 2 TGEPYRLSP 10
TGE YR+ P
Sbjct: 91 TGEVYRVVP 99


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 3 GEPYRLS 9
G+P+RLS
Sbjct: 445 GDPFRLS 451


>sp|RS4E_PYRIL|SMALL ribosomal subunit protein eS4|Pyrobaculum islandicum (strain DSM

Query: 2 TGEPYRLSP 10
TGE YR+ P
Sbjct: 91 TGEIYRVVP 99


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 2 TGEPYRLS 9
TG YRLS
Sbjct: 132 TGSQYRLS 139


>sp|PDAD2_METAC|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 ETGEPYRL 8
+T EP+RL
Sbjct: 73 DTNEPHRL 80


>sp|RS4E_HYPBU|SMALL ribosomal subunit protein eS4|Hyperthermus butylicus (strain DSM

Query: 1 ETGEPYRLSP 10
+TGE YR+ P
Sbjct: 95 DTGEFYRVLP 104


>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 2 TGEPYRLS 9
TG YRLS
Sbjct: 143 TGSKYRLS 150


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TGEPYR 7
TG PYR
Sbjct: 371 TGRPYR 376


>sp|RRP4_METBU|EXOSOME complex component Rrp4|Methanococcoides burtonii (strain DSM 6242

Query: 1 ETGEPY 6
ETG PY
Sbjct: 76 ETGSPY 81


>sp|PDAD2_METMA|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Methanosarcina mazei (strain ATCC

Query: 1 ETGEPYRL 8
+T EP+RL
Sbjct: 73 DTNEPHRL 80


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 2 TGEPYRLSP 10
TG P+R+ P
Sbjct: 505 TGTPHRVVP 513


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 1 ETGEPY 6
ETG PY
Sbjct: 67 ETGNPY 72


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 1 ETGEPYRLS 9
E G PYR++
Sbjct: 316 EEGTPYRVA 324




63|Sequence|311|320|YRLSPEPTPL

>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LSPEPTPL 10
L PEPT L
Sbjct: 415 LEPEPTEL 422


>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RLSPEPTP 9
RLS EP+P
Sbjct: 14 RLSTEPSP 21


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 YRLSPEP 7
YRLSP P
Sbjct: 324 YRLSPGP 330


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 1 YRLSPEPTP 9
Y+L+ PTP
Sbjct: 253 YKLTKTPTP 261


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LSPEPTP 9
PEPTP
Sbjct: 25 FEPEPTP 31


>sp|GGGPS_PYRAB|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 SPEPTP 9
SPEP P
Sbjct: 182 SPEPVP 187


>sp|SYFA_METAC|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YRLSPEPTPL 10
YRL P PL
Sbjct: 219 YRLDIAPNPL 228




64|Sequence|316|325|EPTPLAEPIL

>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPTPLAEPIL 10
EP P +PIL
Sbjct: 171 EPNPERDPIL 180


>sp|TRUD_THEON|PROBABLE tRNA pseudouridine synthase D|Thermococcus onnurineus (strain NA1)

Query: 2 PTPLAEP 8
P P+AEP
Sbjct: 364 PKPMAEP 370


>sp|TRUD_THEKO|PROBABLE tRNA pseudouridine synthase D|Thermococcus kodakarensis (strain

Query: 2 PTPLAEP 8
P P+AEP
Sbjct: 364 PKPMAEP 370


>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 2 PTPLAEP 8
P P+AEP
Sbjct: 363 PKPMAEP 369


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EPTPLAEP 8
EPT L EP
Sbjct: 162 EPTELLEP 169


>sp|GFCR_HALVD|TRANSCRIPTIONAL regulator GfcR|Haloferax volcanii (strain ATCC 29605

Query: 1 EPTPLAEP 8
EP P AEP
Sbjct: 47 EPEPRAEP 54


>sp|R15PI_HALVD|RIBOSE 1,5-bisphosphate isomerase|Haloferax volcanii (strain ATCC 29605

Query: 1 EPTPLAEP 8
EP+P AEP
Sbjct: 316 EPSPRAEP 323


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EPTPLAEP 8
+PT LAEP
Sbjct: 194 DPTELAEP 201


>sp|MNTP_METMA|MANGANESE exporter MntP|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TPLAEPIL 10
TP+ EP++
Sbjct: 128 TPILEPVI 135


>sp|MNTP_METBF|MANGANESE exporter MntP|Methanosarcina barkeri (strain Fusaro /

Query: 3 TPLAEPIL 10
TP+ EP++
Sbjct: 128 TPILEPVI 135


>sp|MNTP_METAC|MANGANESE exporter MntP|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 TPLAEPIL 10
TP+ EP++
Sbjct: 128 TPILEPVI 135


>sp|COFC_NATPD|2-PHOSPHO-L-LACTATE guanylyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EPTPLAEPIL 10
EPT LAE +L
Sbjct: 162 EPTDLAEVLL 171


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EPTPLAEPI 9
EP PLAE I
Sbjct: 441 EPVPLAELI 449


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EPTPLAEPI 9
EP PLAE I
Sbjct: 73 EPDPLAERI 81


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 EPTPLAEP 8
+PT LAEP
Sbjct: 194 DPTELAEP 201


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 EPTPLAEP 8
+PT LAEP
Sbjct: 194 DPTELAEP 201


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 EPTPLAEP 8
+PT LAEP
Sbjct: 194 DPTELAEP 201


>sp|AROE_HALLT|SHIKIMATE dehydrogenase (NADP(+))|Halorubrum lacusprofundi (strain ATCC

Query: 1 EPTPLAEPI 9
+P PLAE I
Sbjct: 73 DPAPLAERI 81




65|Sequence|321|330|AEPILEVEVT

>sp|Y215_NITMS|MEMO1 family protein Nmar_0215|Nitrosopumilus maritimus (strain SCM1)

Query: 2 EPILEVEV 9
EPILE++V
Sbjct: 206 EPILEMDV 213


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 2 EPILEVEV 9
EPIL +EV
Sbjct: 622 EPILAIEV 629




66|Sequence|326|335|EVEVTLSKPV

>sp|RL24_METS3|LARGE ribosomal subunit protein uL24|Methanobrevibacter smithii (strain

Query: 3 EVTLSKP 9
EVTLSKP
Sbjct: 77 EVTLSKP 83


>sp|IF5A_THEAC|TRANSLATION initiation factor 5A|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VEVTLSKP 9
VE+T+SKP
Sbjct: 27 VEITMSKP 34


>sp|IF5A_THEVO|TRANSLATION initiation factor 5A|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VEVTLSKP 9
VE+T+SKP
Sbjct: 27 VEITMSKP 34


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VEVTLSKPV 10
VE+T SKP+
Sbjct: 455 VEITTSKPI 463


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VEVTLSKPV 10
VE+T SKP+
Sbjct: 455 VEITTSKPI 463


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 VEVTLSKPV 10
VE+T SKP+
Sbjct: 455 VEITTSKPI 463


>sp|AATE_THEON|A-TYPE ATP synthase subunit E|Thermococcus onnurineus (strain NA1)

Query: 1 EVEVTLSKPV 10
+VEVTL +P+
Sbjct: 152 DVEVTLGEPI 161


>sp|IF2G_HALWD|TRANSLATION initiation factor 2 subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EVEVTLSKPV 10
E EV+L +PV
Sbjct: 373 EAEVSLKRPV 382


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 EVEVTLSKPV 10
E+EV L +PV
Sbjct: 378 EIEVQLRRPV 387


>sp|IF2G_HALLT|TRANSLATION initiation factor 2 subunit|Halorubrum lacusprofundi (strain ATCC

Query: 1 EVEVTLSKPV 10
E EV+L +PV
Sbjct: 376 ECEVSLKRPV 385


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 2 VEVTLSKPV 10
VE+T SKP+
Sbjct: 455 VEITTSKPI 463


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 EVEVTLSKPV 10
E+EV L +PV
Sbjct: 377 EIEVELRRPV 386


>sp|AATE_THEKO|A-TYPE ATP synthase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 1 EVEVTLSKPV 10
EVE+T+ +P+
Sbjct: 152 EVEITVGEPI 161


>sp|ASSY_METBA|ARGININOSUCCINATE synthase|Methanosarcina barkeri

Query: 2 VEVTLSKP 9
VEVT SKP
Sbjct: 163 VEVTKSKP 170


>sp|ASSY_METBF|ARGININOSUCCINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VEVTLSKP 9
VEVT SKP
Sbjct: 163 VEVTKSKP 170


>sp|SYS2_METKA|TYPE-2 serine--tRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 EVEVTLSKPV 10
EVE+TLS+ V
Sbjct: 8 EVELTLSREV 17


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 EVEVTLSKPV 10
E EV L +PV
Sbjct: 375 ECEVALKRPV 384


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 EVEVTLSKPV 10
E EV L +PV
Sbjct: 375 ECEVALKRPV 384


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EVEVTLSKP 9
E+E+ L KP
Sbjct: 789 ELEINLGKP 797


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 2 VEVTLSKP 9
VEVT+ KP
Sbjct: 192 VEVTVEKP 199


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 EVEVTLSKPV 10
E+E+ L +PV
Sbjct: 376 EIEIKLKQPV 385


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VEVTLSKPV 10
VEVT+ KP+
Sbjct: 516 VEVTVIKPI 524


>sp|FDHD_SULTO|SULFUR carrier protein FdhD|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VEVTLSKPV 10
VEV L+KP+
Sbjct: 82 VEVRLNKPL 90




67|Sequence|331|340|LSKPVPESEF

>sp|Y2595_SACS2|UPF0310 protein SSO2595|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LSKPVPESE 9
L +P+PES+
Sbjct: 126 LKRPIPESD 134


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain ATCC

Query: 1 LSKPVPESE 9
L KPV ESE
Sbjct: 112 LVKPVSESE 120


>sp|DHYS_PYRHO|PROBABLE deoxyhypusine synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LSKPVPESEF 10
LS+P+ SEF
Sbjct: 167 LSRPLTASEF 176


>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 5 VPESEF 10
VPESEF
Sbjct: 73 VPESEF 78


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 3 KPVPES 8
KPVPES
Sbjct: 30 KPVPES 35


>sp|RS17_METMJ|SMALL ribosomal subunit protein uS17|Methanoculleus marisnigri (strain

Query: 1 LSKPVPESE 9
L P+PE+E
Sbjct: 7 LDVPIPETE 15


>sp|RS4E_PYRCJ|SMALL ribosomal subunit protein eS4|Pyrobaculum calidifontis (strain DSM

Query: 3 KPVPESE 9
KP+P SE
Sbjct: 108 KPIPSSE 114




68|Sequence|336|345|PESEFSSSPL

>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 1 PESEFS 6
PESEFS
Sbjct: 74 PESEFS 79


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 PESEFSSSPL 10
PE++F PL
Sbjct: 99 PEAKFGGKPL 108


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 ESEFSSSPL 10
E FSS PL
Sbjct: 9095 EDHFSSQPL 9103


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 3 SEFSSSPL 10
SEF+ SPL
Sbjct: 302 SEFTESPL 309


>sp|MTRE_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina barkeri (strain

Query: 3 SEFSSSPL 10
SEF+ SPL
Sbjct: 80 SEFTMSPL 87




69|Sequence|341|350|SSSPLQAPTP

>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SSPLQAPTP 10
S+P QAP P
Sbjct: 138 SAPAQAPAP 146




70|Sequence|346|355|QAPTPLASHT

***** No hits found ******


71|Sequence|351|360|LASHTVEIHE

>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 HTVEIHE 10
HTV++HE
Sbjct: 371 HTVQVHE 377


>sp|PUR1_ARCFU|AMIDOPHOSPHORIBOSYLTRANSFERASE fulgidus (strain ATCC 49558

Query: 2 ASHTVE 7
ASHTVE
Sbjct: 400 ASHTVE 405


>sp|PURA_ARCFU|ADENYLOSUCCINATE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ASHTVEI 8
A HTVEI
Sbjct: 41 AGHTVEI 47


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LASHTVEIH 9
LASH + +H
Sbjct: 491 LASHILNVH 499


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 ASHTVEIHE 10
A+H +E H+
Sbjct: 341 ATHLIEFHQ 349


>sp|SYFA_SULAC|PHENYLALANINE--TRNA ligase alpha subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ASHTVEIHE 10
A+H +E H+
Sbjct: 340 ATHLIEFHQ 348


>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ASHTVEIHE 10
A+H +E H+
Sbjct: 340 ATHLIEFHQ 348


>sp|SYFA_SACS2|PHENYLALANINE--TRNA ligase alpha subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ASHTVEIHE 10
A+H +E H+
Sbjct: 342 ATHLIEFHQ 350




72|Sequence|356|365|VEIHEPNGMV

>sp|COAD_PYRAE|PHOSPHOPANTETHEINE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VEIHEPNG 8
VEIH+P G
Sbjct: 79 VEIHDPYG 86


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 1 VEIHEPNG 8
V +HEP+G
Sbjct: 66 VAVHEPDG 73


>sp|SAHH_SACS2|ADENOSYLHOMOCYSTEINASE solfataricus (strain ATCC 35092

Query: 1 VEIHEPN 7
V+IHEPN
Sbjct: 114 VKIHEPN 120


>sp|Y1688_HALSA|UNCHARACTERIZED protein VNG_1688C|Halobacterium salinarum (strain ATCC 700922

Query: 1 VEIHEPNGM 9
+ +HEP GM
Sbjct: 130 ISLHEPPGM 138


>sp|RS7_THEAC|SMALL ribosomal subunit protein uS7|Thermoplasma acidophilum (strain

Query: 1 VEIHEPNGMV 10
VEIH+P GMV
Sbjct: 11 VEIHDP-GMV 19


>sp|PELO_CALMQ|PROTEIN pelota homolog|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 EIHEPNGMV 10
E+H+PN ++
Sbjct: 187 EVHKPNALI 195


Query: 1 VEIHEPNGMV 10
+E HEP G++
Sbjct: 65 LEFHEPRGVL 74


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 1 VEIHEPNGMV 10
V +H PNG++
Sbjct: 901 VRVHAPNGVL 910


>sp|PUS10_THEAC|TRNA pseudouridine synthase Pus10|Thermoplasma acidophilum (strain ATCC

Query: 3 IHEPNG 8
IH PNG
Sbjct: 179 IHRPNG 184


>sp|SRP54_HALWD|SIGNAL recognition particle 54 kDa|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VEIHEPNGMV 10
VE EPNG +
Sbjct: 276 VERFEPNGFI 285


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VEIHEPNG 8
VE+ +PNG
Sbjct: 317 VEVSKPNG 324


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VEIHEPNG 8
+EIH+P G
Sbjct: 856 MEIHKPKG 863


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 HEPNGMV 10
H P GMV
Sbjct: 179 HNPTGMV 185


>sp|RS9_ARCFU|SMALL ribosomal subunit protein uS9|Archaeoglobus fulgidus (strain ATCC

Query: 1 VEIHEP 6
VEIH+P
Sbjct: 36 VEIHQP 41


>sp|DPCKG_IGNH4|GTP-DEPENDENT dephospho-CoA kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VEIHEPNGMV 10
VE+ PNG++
Sbjct: 61 VELRAPNGVL 70


>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VEIHEPNGMV 10
+EIH NG++
Sbjct: 273 IEIHGSNGVI 282


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 HEPNGMV 10
H P GMV
Sbjct: 178 HNPTGMV 184


>sp|HMGCS_THEVO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VEIHEPNG 8
V H+PNG
Sbjct: 231 VVFHQPNG 238


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VEIHEPNG 8
V H+PNG
Sbjct: 231 VVFHQPNG 238


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 VEIHEPNG 8
V H+PNG
Sbjct: 231 VVFHQPNG 238


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC

Query: 1 VEIHEPNGMV 10
VEI PNG V
Sbjct: 29 VEIETPNGDV 38


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 1 VEIHEPNGMV 10
VEI PNG V
Sbjct: 29 VEIETPNGDV 38


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 1 VEIHEPNG 8
V+IH P G
Sbjct: 325 VKIHSPEG 332


>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 1 VEIHEPNGM 9
+++ +PNGM
Sbjct: 105 IKVWQPNGM 113


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 VEIHEPNGMV 10
V++H+ NG V
Sbjct: 258 VQVHKSNGKV 267


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 1 VEIHEPNGMV 10
+E EPNG +
Sbjct: 276 IERFEPNGFI 285


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VEIHEPNG 8
V H+PNG
Sbjct: 233 VVFHQPNG 240


>sp|HMGCS_PYRAE|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VEIHEPNG 8
V H+PNG
Sbjct: 233 VVFHQPNG 240


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 VEIHEPNG 8
VEI PNG
Sbjct: 32 VEIEMPNG 39


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VEIHEPNG 8
VEI PNG
Sbjct: 32 VEIEMPNG 39


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VEIHEPNG 8
VEI PNG
Sbjct: 32 VEIEMPNG 39


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 1 VEIHEPNG 8
VEI PNG
Sbjct: 32 VEIEMPNG 39


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15

Query: 1 VEIHEPNG 8
VEI PNG
Sbjct: 32 VEIEMPNG 39


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 VEIHEPNG 8
VEI PNG
Sbjct: 32 VEIEMPNG 39


>sp|YNI1_METIV|UNCHARACTERIZED protein in nifH2 5'region|Methanobacterium ivanovii

Query: 1 VEIHEPN 7
+E+H PN
Sbjct: 10 IEVHSPN 16


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 1 VEIHEPNG 8
VEI PNG
Sbjct: 32 VEIEMPNG 39


>sp|MTAP_PYRAE|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VEIHEPNGM 9
V+IH P G+
Sbjct: 42 VQIHTPYGL 50


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 1 VEIHEPNGM 9
+E+ P+GM
Sbjct: 176 IEVRNPHGM 184


>sp|HMGCS_PYRAR|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VEIHEPNG 8
V H+PNG
Sbjct: 232 VVFHQPNG 239


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VEIHEPNG 8
VEI PNG
Sbjct: 29 VEIETPNG 36


>sp|Y137_METJA|UNCHARACTERIZED protein MJ0137|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IHEPNGMV 10
IH P G+V
Sbjct: 101 IHTPGGLV 108


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 VEIHEPNGMV 10
V++H+ NG V
Sbjct: 258 VQVHKSNGEV 267




73|Sequence|361|370|PNGMVPSEDL

>sp|AGL9_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl9|Haloferax volcanii

Query: 3 GMVPSEDL 10
G+VP EDL
Sbjct: 281 GIVPEEDL 288


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NGMVPSEDL 10
NG VPS++L
Sbjct: 635 NGKVPSDNL 643


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PNGMVPSE 8
P G++PSE
Sbjct: 375 PTGLLPSE 382


>sp|KITH_HALWD|THYMIDINE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PNGMVPSED 9
P G++PS D
Sbjct: 104 PGGVIPSND 112


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 1 PNGMVPSED 9
P G +P+ED
Sbjct: 178 PPGFIPTED 186


>sp|Y1870_ARCFU|UNCHARACTERIZED protein AF_1870|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GMVPSEDL 10
G VPS+DL
Sbjct: 31 GYVPSKDL 38


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 PNGMVPSED 9
P G PSED
Sbjct: 307 PRGATPSED 315


>sp|RISB_PYRFU|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GMVPSED 9
G+VP+ED
Sbjct: 113 GIVPAED 119


>sp|HTPX2_METAC|PROTEASE HtpX homolog 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 VPSEDL 10
VPSEDL
Sbjct: 244 VPSEDL 249


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 2 NGMVPSED 9
N +VPSED
Sbjct: 317 NDLVPSED 324


>sp|Y1105_THEAC|UNCHARACTERIZED protein Ta1105|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PNGMVPSE 8
PNG+ P E
Sbjct: 65 PNGLPPGE 72


>sp|HIS8_METST|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GMVPSEDL 10
G++P ED+
Sbjct: 172 GLIPQEDI 179


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 2 NGMVPSEDL 10
G++PSED+
Sbjct: 122 EGVIPSEDV 130


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 3 GMVPSEDL 10
GMV SED+
Sbjct: 475 GMVTSEDI 482


>sp|AROE_METKA|SHIKIMATE dehydrogenase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 1 PNGMVPSED 9
P GM P+ED
Sbjct: 206 PVGMYPNED 214


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 1 PNGMVPSEDL 10
PNG + +DL
Sbjct: 43 PNGGISDDDL 52


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain ATCC

Query: 2 NGMVPSEDL 10
G++PSED+
Sbjct: 122 EGVIPSEDV 130


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PNGMVPSE 8
PNG+ P E
Sbjct: 29 PNGVSPEE 36


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC

Query: 1 PNGMVPSE 8
PNG+ P E
Sbjct: 34 PNGVSPEE 41


>sp|ILVC_METBU|KETOL-ACID reductoisomerase (NADP(+))|Methanococcoides burtonii (strain DSM

Query: 2 NGMVPSEDL 10
N +VPS+DL
Sbjct: 115 NQIVPSKDL 123


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 PNGMVPSE 8
PNG+ P E
Sbjct: 33 PNGVSPEE 40


>sp|DLDH2_HALMA|DIHYDROLIPOYL dehydrogenase 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 NGMVPSED 9
NG++P++D
Sbjct: 297 NGVIPTDD 304


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 1 PNGMVPSEDL 10
P GM P D+
Sbjct: 49 PEGMTPGSDV 58


>sp|QUEE_METHJ|7-CARBOXY-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NGMVPSEDL 10
NG VP +DL
Sbjct: 130 NGTVPFDDL 138




74|Sequence|366|375|PSEDLEPEVE

>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PSEDLEPEVE 10
PS +LEPEV
Sbjct: 407 PSGELEPEVR 416


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 PSEDLEPEV 9
P DLEPEV
Sbjct: 662 PYFDLEPEV 670


>sp|GATD_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 PSEDLEPEV 9
P ED+ PEV
Sbjct: 392 PLEDMLPEV 400


>sp|GATD_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 PSEDLEPEV 9
P ED+ PEV
Sbjct: 392 PLEDMLPEV 400


>sp|GATD_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain M.16.4

Query: 1 PSEDLEPEV 9
P ED+ PEV
Sbjct: 392 PLEDMLPEV 400


>sp|GATD_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain M.14.25

Query: 1 PSEDLEPEV 9
P ED+ PEV
Sbjct: 392 PLEDMLPEV 400


>sp|GATD_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 PSEDLEPEV 9
P ED+ PEV
Sbjct: 392 PLEDMLPEV 400


>sp|GATD_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 PSEDLEPEV 9
P ED+ PEV
Sbjct: 392 PLEDMLPEV 400


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 PSEDLEPEVE 10
PSED++ EVE
Sbjct: 221 PSEDVDLEVE 230


>sp|GATD_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus solfataricus (strain ATCC

Query: 1 PSEDLEPEV 9
P ED+ PEV
Sbjct: 391 PLEDMLPEV 399


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 1 PSEDLEPEV 9
P ED+ PEV
Sbjct: 401 PGEDMLPEV 409


>sp|GATD_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C5 /

Query: 1 PSEDLEPEV 9
P ED+ PEV
Sbjct: 373 PCEDMLPEV 381


>sp|D89S1_PYRHO|DAMAGE-CONTROL phosphatase PH1575|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EDLEPEVE 10
EDLE EVE
Sbjct: 119 EDLEEEVE 126


>sp|NNR_METKA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanopyrus kandleri (strain

Query: 1 PSEDLEPE 8
P+E LEPE
Sbjct: 289 PAERLEPE 296




75|Sequence|371|380|EPEVESSPEL

>sp|GATC_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit C|Halobacterium salinarum (strain ATCC

Query: 2 PEVESSPEL 10
PEV++ PEL
Sbjct: 47 PEVDAEPEL 55


>sp|GATC_HALS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Halobacterium salinarum (strain ATCC

Query: 2 PEVESSPEL 10
PEV++ PEL
Sbjct: 47 PEVDAEPEL 55


>sp|TRPF_METMP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PEVESSPEL 10
PE +SPE+
Sbjct: 105 PETSTSPEI 113


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 2 PEVESSPE 9
PEVE PE
Sbjct: 55 PEVELKPE 62




76|Sequence|376|385|SSPELAPPPA

>sp|HDRE_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina thermophila

Query: 3 PELAPPPA 10
P LAPP A
Sbjct: 220 PSLAPPAA 227


>sp|AROA_PICTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 SPELAPP 8
+P+LAPP
Sbjct: 293 NPDLAPP 299


>sp|LYSZ_PYRAR|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum arsenaticum

Query: 2 SPELAPPP 9
+ +LAPPP
Sbjct: 138 AAKLAPPP 145


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PELAPP 8
PEL PP
Sbjct: 597 PELVPP 602


>sp|HEM3_CALMQ|PROBABLE porphobilinogen deaminase|Caldivirga maquilingensis (strain ATCC

Query: 2 SPELAPP 8
SPEL PP
Sbjct: 184 SPELMPP 190


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 LAPPPA 10
+APPPA
Sbjct: 112 VAPPPA 117


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 SPELAPPP 9
SP LAPPP
Sbjct: 84 SPNLAPPP 91


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 1 SSPELAPPP 9
SSP LA PP
Sbjct: 2 SSPNLAHPP 10


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 5 LAPPPA 10
L+PPPA
Sbjct: 22 LSPPPA 27


>sp|COXX1_NATPD|PROTOHEME IX farnesyltransferase 1|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PELAPP 8
PELAPP
Sbjct: 147 PELAPP 152




77|Sequence|381|390|APPPACPSES

>sp|RL24_PICTO|LARGE ribosomal subunit protein uL24|Picrophilus torridus (strain ATCC

Query: 2 PPPACPSES 10
PPP P E+
Sbjct: 105 PPPEVPEET 113


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 PPPACPSES 10
PP CP ES
Sbjct: 305 PPALCPEES 313


>sp|RUBY_METJA|PUTATIVE rubrerythrin|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPPACPSES 10
PP CPS S
Sbjct: 183 PPEKCPSCS 191


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PPACP 7
PPACP
Sbjct: 314 PPACP 318


>sp|DNAG_METMJ|DNA primase DnaG|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PPPACPSE 9
PP A P+E
Sbjct: 284 PPSAAPAE 291


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 APPPACP 7
+P P CP
Sbjct: 630 SPSPTCP 636


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PPPACPSE 9
PPP P E
Sbjct: 409 PPPGTPQE 416


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 APPPACPSE 9
+P P CP E
Sbjct: 171 SPNPYCPDE 179


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 3 PPACPSES 10
PPA P+ES
Sbjct: 84 PPAVPAES 91




78|Sequence|386|395|CPSESPVPIA

>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 CPSESP 6
CPSE+P
Sbjct: 464 CPSETP 469


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 CPSESP 6
CPSE+P
Sbjct: 464 CPSETP 469


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 1 CPSESP 6
CPSE+P
Sbjct: 455 CPSETP 460


>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PSESPVPIA 10
P E PVP+A
Sbjct: 97 PPELPVPVA 105


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 2 PSESPVPI 9
PS +P+PI
Sbjct: 200 PSSTPLPI 207


>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 1 CPSESP 6
CPSE+P
Sbjct: 455 CPSETP 460


>sp|FEN_METB6|FLAP endonuclease 1|Methanoregula boonei (strain DSM 21154

Query: 1 CPSESPVPIA 10
CP P P+A
Sbjct: 265 CPGFDPAPVA 274


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 ESPVPIA 10
E+P+PIA
Sbjct: 167 ENPIPIA 173


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 CPSESP 6
CP+E+P
Sbjct: 466 CPTETP 471


>sp|RPO2N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 CPSESP 6
CP+E+P
Sbjct: 473 CPNETP 478


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 CPSESP 6
CP+E+P
Sbjct: 478 CPNETP 483


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 PSESPVP 8
P ESP+P
Sbjct: 525 PQESPLP 531


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 CPSESP 6
CP+E+P
Sbjct: 500 CPNETP 505


>sp|THIL_PYRCJ|THIAMINE-MONOPHOSPHATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CPSESP 6
CP ESP
Sbjct: 255 CPVESP 260


>sp|IF2B_NANEQ|TRANSLATION initiation factor 2 subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 CPSESPV 7
C SESPV
Sbjct: 129 CGSESPV 135


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi

Query: 1 CPSESPV 7
CP SPV
Sbjct: 39 CPGSSPV 45


>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 CPSESPVP 8
CP ++P+P
Sbjct: 143 CPGDTPLP 150




79|Sequence|391|400|PVPIAPTAQP

***** No hits found ******


80|Sequence|396|405|PTAQPEELLN

>sp|TRUA_METTP|TRNA pseudouridine synthase A|Methanothrix thermoacetophila (strain DSM

Query: 1 PTAQPEELL 9
PTA PE L+
Sbjct: 209 PTAPPEGLM 217


>sp|PYRH_METJA|URIDYLATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PEELLN 10
PEELLN
Sbjct: 208 PEELLN 213


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 QPEELLN 10
+PEELLN
Sbjct: 668 KPEELLN 674


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 QPEELLN 10
+PEELLN
Sbjct: 669 KPEELLN 675


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 QPEELLN 10
+PEELLN
Sbjct: 670 KPEELLN 676


>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain

Query: 1 PTAQPEELLN 10
PT P E+LN
Sbjct: 15 PTMVPPEVLN 24


>sp|COMC_METFV|L-SULFOLACTATE dehydrogenase|Methanothermus fervidus (strain ATCC 43054

Query: 1 PTAQPEELLN 10
PT P E LN
Sbjct: 206 PTTDPNEALN 215


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii

Query: 2 TAQPEELLN 10
T +PEEL+N
Sbjct: 21 TDKPEELVN 29


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 TAQPEELLN 10
TA PEE+ N
Sbjct: 236 TANPEEIKN 244


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 5 PEELLN 10
PEELLN
Sbjct: 182 PEELLN 187


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 PEELLN 10
PEELLN
Sbjct: 177 PEELLN 182


>sp|HISX_METJA|HISTIDINOL dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TAQPEELLN 10
T PEE+LN
Sbjct: 333 TKNPEEVLN 341


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TAQPEELLN 10
TA PEE+ N
Sbjct: 236 TANPEEIKN 244


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AQPEELL 9
A+PEELL
Sbjct: 676 ARPEELL 682


>sp|PDXS_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum aerophilum (strain

Query: 2 TAQPEELL 9
T +PEELL
Sbjct: 324 TLKPEELL 331


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PTAQPEELL 9
PT PEE L
Sbjct: 66 PTIMPEEAL 74


>sp|HEM3_METAR|PROBABLE porphobilinogen deaminase|Methanocella arvoryzae (strain DSM

Query: 1 PTAQPEELL 9
PT +PE L+
Sbjct: 79 PTVRPENLV 87


>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum (strain

Query: 2 TAQPEELL 9
T +PEELL
Sbjct: 325 TLKPEELL 332


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TAQPEELLN 10
T P+EL+N
Sbjct: 164 TLDPQELIN 172




81|Sequence|401|410|EELLNGAPSP

>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 2 ELLNGAPS 9
EL+NGAP+
Sbjct: 301 ELVNGAPT 308


>sp|KITH_PYRAE|THYMIDINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EELLNGAPSP 10
+ L+NG P+P
Sbjct: 150 QRLINGVPAP 159


>sp|DPS_PYRFU|DNA protection during starvation protein|Pyrococcus furiosus (strain

Query: 1 EELLNGAPS 9
EELL G PS
Sbjct: 156 EELLTGKPS 164


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 EELLNGAPSP 10
EE+L G P+P
Sbjct: 58 EEVLKGNPTP 67


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 ELLNGAPSP 10
ELLN P P
Sbjct: 211 ELLNAGPVP 219


>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 EELLNGAPSP 10
E++L+G P+P
Sbjct: 41 EDVLDGVPTP 50


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EELLNGAPSP 10
++L+NG P P
Sbjct: 174 DKLINGTPRP 183


>sp|IXTPA_KORCO|DITP/XTP pyrophosphatase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 ELLNGAPSP 10
E LNG P P
Sbjct: 68 EALNGFPGP 76


>sp|SAT_THEON|SULFATE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 ELLNGAPSP 10
ELLN P+P
Sbjct: 153 ELLNEVPNP 161


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ELLNGAPS 9
EL+ GAPS
Sbjct: 772 ELMEGAPS 779


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ELLNGAPS 9
EL+ GAPS
Sbjct: 772 ELMEGAPS 779


>sp|PDXT_KORCO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Korarchaeum cryptofilum

Query: 1 EELLNGAPS 9
+E+LNG P+
Sbjct: 71 DEILNGLPA 79


>sp|RL34_METVS|LARGE ribosomal subunit protein eL34|Methanococcus vannielii (strain

Query: 3 LLNGAPS 9
LLNG PS
Sbjct: 43 LLNGVPS 49


>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 ELLNGAPSP 10
ELLN P+P
Sbjct: 153 ELLNELPNP 161


>sp|PDXT_AERPE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Aeropyrum pernix (strain ATCC

Query: 1 EELLNGAPS 9
E++LNG P+
Sbjct: 72 EQVLNGLPA 80


>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 1 EELLNGAPSP 10
EE +GAP P
Sbjct: 271 EEKRSGAPPP 280


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ELLNGAPSP 10
EL+ G P+P
Sbjct: 158 ELIQGPPNP 166


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ELLNGAPS 9
EL+ GAPS
Sbjct: 772 ELMAGAPS 779


>sp|TRPD_METB6|ANTHRANILATE phosphoribosyltransferase|Methanoregula boonei (strain DSM 21154

Query: 3 LLNGAPSP 10
+L+GAP P
Sbjct: 279 ILDGAPGP 286


>sp|IXTPA_METKA|DITP/XTP pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 2 ELLNGAPSP 10
E LNG P P
Sbjct: 71 EALNGFPGP 79


>sp|RADB_METMP|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 EELLNG 6
EELLNG
Sbjct: 3 EELLNG 8


>sp|RADB_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 EELLNG 6
EELLNG
Sbjct: 3 EELLNG 8


>sp|RADB_METM5|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 EELLNG 6
EELLNG
Sbjct: 3 EELLNG 8


>sp|RADA_METMJ|DNA repair and recombination protein|Methanoculleus marisnigri (strain

Query: 1 EELLNGAP 8
E++LNG P
Sbjct: 152 EQMLNGLP 159




82|Sequence|406|415|GAPSPPAVDL

>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 GAPSPPAVD 9
G+ SPPAVD
Sbjct: 213 GSASPPAVD 221


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 1 GAPSPP 6
GAP+PP
Sbjct: 58 GAPNPP 63


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GAPSPPAVD 9
G+ SPPAVD
Sbjct: 219 GSASPPAVD 227


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 GAPSPPAVDL 10
G PSPP V L
Sbjct: 516 GDPSPPFVGL 525


>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GAPSPPAV 8
G+P PP V
Sbjct: 42 GSPEPPHV 49


>sp|Y288_METJA|UNCHARACTERIZED protein MJ0288|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GAPSPPAVDL 10
GA +PP +D+
Sbjct: 28 GAITPPKIDI 37


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GAPSPP 6
G PSPP
Sbjct: 511 GRPSPP 516


>sp|SECF_HALVD|PROTEIN-EXPORT membrane protein SecF|Haloferax volcanii (strain ATCC 29605

Query: 1 GAPSPPAVDL 10
GAP P VD
Sbjct: 42 GAPVNPGVDF 51


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GAPSPP 6
G PSPP
Sbjct: 511 GRPSPP 516


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GAPSPP 6
G PSPP
Sbjct: 511 GRPSPP 516


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GAPSPP 6
G PSPP
Sbjct: 511 GRPSPP 516


>sp|PCNA_METMJ|DNA polymerase sliding clamp|Methanoculleus marisnigri (strain ATCC

Query: 3 PSPPAVDL 10
P+PP +DL
Sbjct: 120 PNPPGIDL 127


>sp|Y452_METJA|UNCHARACTERIZED protein MJ0452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GAPSPPAV 8
G P PPA+
Sbjct: 9 GCPEPPAL 16


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GAPSPP 6
G PSPP
Sbjct: 515 GRPSPP 520


>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GAPSPPAVDL 10
G P+P +DL
Sbjct: 84 GTPTPAEIDL 93


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GAPSPPAVDL 10
G P+P ++DL
Sbjct: 358 GTPTPVSLDL 367


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GAPSPPA 7
G P PPA
Sbjct: 265 GIPEPPA 271


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 1 GAPSPP 6
G PSPP
Sbjct: 58 GPPSPP 63




83|Sequence|411|420|PAVDLSPVSE

>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PAVDLSPVSE 10
P VDLSP+ E
Sbjct: 210 PVVDLSPIFE 219


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 2 AVDLSPVSE 10
A+D+ PV+E
Sbjct: 90 AIDMEPVTE 98


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 AVDLSPVSE 10
AVDLSPV +
Sbjct: 234 AVDLSPVDD 242


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PAVDLSPVSE 10
PA DL PV++
Sbjct: 584 PAADLEPVAD 593


>sp|Y345_METJA|UNCHARACTERIZED protein MJ0345|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PAVDLSPVSE 10
PAVD +PV E
Sbjct: 237 PAVDGTPVYE 246


>sp|RL5_CALMQ|LARGE ribosomal subunit protein uL5|Caldivirga maquilingensis (strain

Query: 1 PAVDLSPV 8
PA+DLS +
Sbjct: 2 PAIDLSTI 9


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 3 VDLSPVSE 10
+DLSP+ E
Sbjct: 333 IDLSPLDE 340


>sp|KDPA_METB6|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Methanoregula boonei (strain DSM

Query: 1 PAVDLSPVSE 10
PA+ L PV E
Sbjct: 563 PALSLGPVVE 572


>sp|HIS4_METTH|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermobacter

Query: 2 AVDLSPVSE 10
DL PVSE
Sbjct: 176 GFDLKPVSE 184


>sp|PPS_METJA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AVDLSPVS 9
A+DL+P+S
Sbjct: 191 AIDLNPLS 198


>sp|PPS_METHJ|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AVDLSPVS 9
A+DL+P+S
Sbjct: 174 AIDLNPLS 181


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 3 VDLSPVSE 10
VDLS VSE
Sbjct: 634 VDLSEVSE 641


>sp|MTRB_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanocaldococcus jannaschii

Query: 3 VDLSPVSE 10
VD+SP+ E
Sbjct: 32 VDVSPIEE 39




84|Sequence|416|425|SPVSEPEEQA

>sp|GATD_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma acidophilum (strain ATCC

Query: 1 SPVSEPE 7
SPVS+PE
Sbjct: 91 SPVSDPE 97


>sp|Y2648_METMA|UPF0280 protein MM_2648|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PVSEPEEQA 10
PV EPEE A
Sbjct: 8 PVKEPEEPA 16


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SPVSEPEE 8
+P+ +PEE
Sbjct: 413 TPIGDPEE 420


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 SPVSEPEE 8
SP+S+PE+
Sbjct: 584 SPLSQPEQ 591




85|Sequence|421|430|PEEQAKEVTA

>sp|TRPA_HALSA|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 700922

Query: 3 EQAKEVTA 10
EQA+E+TA
Sbjct: 215 EQAREITA 222


>sp|TRPA_HALS3|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 29341

Query: 3 EQAKEVTA 10
EQA+E+TA
Sbjct: 215 EQAREITA 222


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PEEQAKEVTA 10
PEEQ KEV +
Sbjct: 61 PEEQQKEVES 70


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PEEQAKEVTA 10
PEE+ E+TA
Sbjct: 581 PEERVDELTA 590


>sp|MCRG_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PEEQAKEVT 9
PEE+ KE+T
Sbjct: 210 PEEKLKEIT 218


>sp|DNAG_DESA1|DNA primase DnaG|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 PEEQAKEVT 9
PE+ AKE+T
Sbjct: 299 PEKVAKEIT 307


>sp|COFE_ARCFU|COENZYME F420:L-glutamate ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEEQAKEVTA 10
P E+AKE+ A
Sbjct: 58 PSERAKEIAA 67


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PEEQAKEVTA 10
P E AKEV A
Sbjct: 459 PPEMAKEVAA 468


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PEEQAKEVTA 10
P E AKEV A
Sbjct: 459 PPEMAKEVAA 468


>sp|Y084_ARCFU|UNCHARACTERIZED protein AF_0084|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEEQAKE 7
P+EQAKE
Sbjct: 100 PKEQAKE 106


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 1 PEEQAKE 7
P+EQA+E
Sbjct: 557 PDEQARE 563




86|Sequence|426|435|KEVTASMAPP

>sp|MAP2_METFE|METHIONINE aminopeptidase|Methanothermus fervidus

Query: 2 EVTASMAPP 10
E+TA +PP
Sbjct: 56 EITAHYSPP 64


>sp|RS19E_SACS2|SMALL ribosomal subunit protein eS19|Saccharolobus solfataricus (strain

Query: 3 VTASMAPP 10
+TA M PP
Sbjct: 6 ITAEMVPP 13




87|Sequence|431|440|SMAPPTIPSA

>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 3 APPTIPS 9
PPTIPS
Sbjct: 568 GPPTIPS 574


>sp|CFBE_METJA|COENZYME F(430) synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SMAPPTI 7
S+APPTI
Sbjct: 142 SIAPPTI 148


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 4 PPTIPS 9
PPT+PS
Sbjct: 188 PPTVPS 193


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 4 PPTIPS 9
PPT+PS
Sbjct: 188 PPTVPS 193


>sp|G3P_METHJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 MAPPTIPS 9
+ PPTIPS
Sbjct: 185 LDPPTIPS 192


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 PPTIPS 9
PPT+PS
Sbjct: 188 PPTVPS 193


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 PPTIPS 9
PPT+PS
Sbjct: 187 PPTVPS 192


>sp|HEM3_METBF|PROBABLE porphobilinogen deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SMAPPTIPS 9
++ PPT+P+
Sbjct: 81 TIRPPTLPT 89


>sp|PIMT2_METAC|PROTEIN-L-ISOASPARTATE O-methyltransferase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 APPTIPSA 10
A PTIP A
Sbjct: 176 AAPTIPKA 183




88|Sequence|436|445|TIPSATPATA

>sp|SYH_THEVO|HISTIDINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IPSATPAT 9
IP ATP+T
Sbjct: 76 IPEATPST 83


>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IPSATPAT 9
IP ATP+T
Sbjct: 79 IPEATPST 86


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 IPSATPAT 9
IP ATP+T
Sbjct: 76 IPEATPST 83


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 TIPSATPAT 9
+IPS PAT
Sbjct: 113 SIPSCVPAT 121


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IPSATPAT 9
+PS PAT
Sbjct: 109 VPSCVPAT 116


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IPSATPAT 9
+PS PAT
Sbjct: 109 VPSCVPAT 116


>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IPSATPAT 9
+PS PAT
Sbjct: 144 VPSCVPAT 151


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IPSATPAT 9
+PS PAT
Sbjct: 109 VPSCVPAT 116


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 2 IPSATPAT 9
IPS PAT
Sbjct: 151 IPSCVPAT 158




89|Sequence|441|450|TPATAPSATS

***** No hits found ******


90|Sequence|446|455|PSATSPAQEE

***** No hits found ******


91|Sequence|451|460|PAQEEEMEEE

>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PAQEEEMEE 9
P QEE +EE
Sbjct: 109 PNQEESLEE 117


>sp|HICDH_PYRHO|ISOCITRATE/HOMOISOCITRATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PAQEEEMEE 9
P +EE++EE
Sbjct: 49 PIREEDLEE 57


>sp|RS3_THEON|SMALL ribosomal subunit protein uS3|Thermococcus onnurineus (strain NA1)

Query: 1 PAQEEEMEEE 10
P QEEE+ EE
Sbjct: 199 PIQEEEVSEE 208


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 1 PAQEEEMEE 9
P QEE++E+
Sbjct: 109 PKQEEKLEK 117




92|Sequence|456|465|EMEEEEEEEE

***** No hits found ******


93|Sequence|461|470|EEEEEGEAGE

>sp|TRM56_STAMF|TRNA (cytidine(56)-2'-O)-methyltransferase|Staphylothermus marinus

Query: 2 EEEEGEA 8
EEEEGE+
Sbjct: 177 EEEEGES 183


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 2 EEEEGEAG 9
EEEEG+AG
Sbjct: 141 EEEEGKAG 148


>sp|EF1A_METM7|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C7 /

Query: 1 EEEEEGEAG 9
E EE+G+AG
Sbjct: 45 EAEEKGKAG 53


>sp|EF1A_METM6|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C6 /

Query: 1 EEEEEGEAG 9
E EE+G+AG
Sbjct: 45 EAEEKGKAG 53




94|Sequence|466|475|GEAGEAGEAE

>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 2 EAGEAGEAE 10
EAG AG+AE
Sbjct: 298 EAGHAGDAE 306


>sp|PCNA2_PYRAE|DNA polymerase sliding clamp 2|Pyrobaculum aerophilum (strain ATCC

Query: 1 GEAGEAGEAE 10
GE G+A E E
Sbjct: 177 GEGGKAAETE 186




95|Sequence|471|480|AGEAESEKGG

>sp|PYRH_THEGJ|URIDYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 AGEAESEKGG 10
A EAES+ GG
Sbjct: 171 AMEAESKAGG 180




96|Sequence|476|485|SEKGGEELLP

>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SEKGGEEL 8
SEK GEEL
Sbjct: 278 SEKTGEEL 285


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC

Query: 2 EKGGEELLP 10
E+GG +LLP
Sbjct: 80 EEGGADLLP 88


>sp|Y1558_METJA|UPF0237 protein MJ1558|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EKGGEEL 8
EK GEEL
Sbjct: 66 EKAGEEL 72


>sp|SYD_PYRAE|ASPARTATE--TRNA(ASP) ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SEKGGEELLP 10
S +GG EL P
Sbjct: 168 STEGGAELFP 177


>sp|THIL_PYRCJ|THIAMINE-MONOPHOSPHATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GGEELLP 10
GGEE LP
Sbjct: 241 GGEEFLP 247


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 3 KGGEELLP 10
+GGE LLP
Sbjct: 389 EGGENLLP 396


>sp|DNPH1_METBU|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanococcoides

Query: 1 SEKGGEELLP 10
S +GG ++LP
Sbjct: 8 SIRGGRQMLP 17


>sp|Y1314_ARCFU|UNCHARACTERIZED protein AF_1314|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KGGEELLP 10
KGG E+LP
Sbjct: 59 KGGIEILP 66


>sp|SYH_SACI7|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 KGGEEL 8
KGGEEL
Sbjct: 54 KGGEEL 59


>sp|SYH_SACI6|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 KGGEEL 8
KGGEEL
Sbjct: 54 KGGEEL 59


>sp|SYH_SACI4|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 KGGEEL 8
KGGEEL
Sbjct: 54 KGGEEL 59


>sp|SYH_SACI2|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 KGGEEL 8
KGGEEL
Sbjct: 54 KGGEEL 59


>sp|SYH_SACI1|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 KGGEEL 8
KGGEEL
Sbjct: 54 KGGEEL 59


>sp|SYH_SACSH|HISTIDINE--TRNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 KGGEEL 8
KGGEEL
Sbjct: 54 KGGEEL 59


>sp|SMC_METJA|CHROMOSOME partition protein Smc|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SEKGGEELL 9
+EKG EE+L
Sbjct: 288 NEKGNEEVL 296


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 4 GGEELLP 10
GGE++LP
Sbjct: 227 GGEDVLP 233


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 4 GGEELLP 10
GGE++LP
Sbjct: 227 GGEDVLP 233


>sp|SYH_SACI3|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 KGGEEL 8
KGGEEL
Sbjct: 54 KGGEEL 59


>sp|SYH_METS5|HISTIDINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 SEKGGEEL 8
S KGGEEL
Sbjct: 52 SLKGGEEL 59


>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 4 GGEELLP 10
GGE++LP
Sbjct: 72 GGEKILP 78


>sp|SYH_SACS2|HISTIDINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KGGEEL 8
KGGEEL
Sbjct: 54 KGGEEL 59




97|Sequence|481|490|EELLPPESTP

>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EELLPPES 8
EEL PP++
Sbjct: 24 EELFPPQA 31


>sp|FTR_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 LPPESTP 10
+PPE TP
Sbjct: 60 VPPEETP 66


>sp|FTR_METJA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EELLPPESTP 10
E+ +PP TP
Sbjct: 57 EKYVPPSKTP 66


>sp|KTHY_METST|PROBABLE thymidylate kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EELLPPEST 9
EELL PE+T
Sbjct: 48 EELLKPEAT 56


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EELLPPEST 9
E +PPE+T
Sbjct: 128 ESTIPPETT 136


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 EELLPPEST 9
E +PPE+T
Sbjct: 128 ESTIPPETT 136


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EELLPPEST 9
E +PPE+T
Sbjct: 128 ESTIPPETT 136


>sp|SURE_METHJ|5'-NUCLEOTIDASE SurE|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 PPESTP 10
PP+STP
Sbjct: 6 PPDSTP 11


>sp|IF6_METLZ|TRANSLATION initiation factor 6|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 LLPPESTP 10
LLP STP
Sbjct: 154 LLPARSTP 161


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 5 PPESTP 10
PP STP
Sbjct: 199 PPSSTP 204


>sp|Y303_PYRFU|UPF0284 protein PF0303|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EELLPPESTP 10
EEL+ ESTP
Sbjct: 132 EELVIGESTP 141


>sp|Y688_THEON|UPF0284 protein TON_0688|Thermococcus onnurineus (strain NA1)

Query: 1 EELLPPESTP 10
EEL+ ESTP
Sbjct: 132 EELVIGESTP 141


>sp|RL18_METKA|LARGE ribosomal subunit protein uL18|Methanopyrus kandleri (strain AV19 /

Query: 1 EELLPPE 7
EE+LPPE
Sbjct: 138 EEVLPPE 144


>sp|Y853_THEKO|UPF0284 protein TK0853|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EELLPPESTP 10
EEL+ ESTP
Sbjct: 132 EELVIGESTP 141


>sp|FTR_METKA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 LPPESTP 10
+PPE TP
Sbjct: 61 VPPEETP 67


>sp|FTR_METFV|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermus fervidus (strain ATCC 43054

Query: 4 LPPESTP 10
+PP++TP
Sbjct: 60 IPPKNTP 66


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 EELLPPES 8
EEL PP++
Sbjct: 23 EELYPPQA 30


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 EELLPPES 8
EEL PP++
Sbjct: 23 EELYPPQA 30




98|Sequence|486|495|PESTPIPANL

>sp|AROE_HALLT|SHIKIMATE dehydrogenase (NADP(+))|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PESTPIPAN 9
PE+TP+PA+
Sbjct: 198 PEATPVPAD 206


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 1 PESTPIP 7
P STP+P
Sbjct: 200 PSSTPLP 206


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 3 STPIPANL 10
+TP+P NL
Sbjct: 374 NTPLPINL 381


>sp|Y3532_METJA|UNCHARACTERIZED protein MJECL32|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PESTPIPANL 10
PE+ P+ AN+
Sbjct: 319 PENKPLNANV 328


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 4 TPIPANL 10
TP+P NL
Sbjct: 381 TPLPINL 387


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TPIPANL 10
TP+P NL
Sbjct: 380 TPLPINL 386


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ESTPIPANL 10
E TP+ ANL
Sbjct: 276 EVTPLQANL 284


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ESTPIPANL 10
E TP+ ANL
Sbjct: 276 EVTPLQANL 284


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 ESTPIPANL 10
E TP+ ANL
Sbjct: 276 EVTPLQANL 284


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 ESTPIPANL 10
E TP+ ANL
Sbjct: 276 EVTPLQANL 284


>sp|Y2125_METS5|UPF0173 metal-dependent hydrolase Msed_2125|Metallosphaera sedula (strain

Query: 1 PESTPIPANL 10
PE+ IPAN+
Sbjct: 88 PEAQLIPANV 97


>sp|SSB_SACS2|SINGLE-STRANDED DNA binding protein Ssb|Saccharolobus solfataricus (strain ATCC

Query: 1 PESTPIPAN 9
PES+ IP N
Sbjct: 102 PESSQIPEN 110


>sp|AROE_THEKO|SHIKIMATE dehydrogenase (NADP(+))|Thermococcus kodakarensis (strain ATCC

Query: 4 TPIPANL 10
TP+PA L
Sbjct: 198 TPVPAEL 204


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 ESTPIPANL 10
E TP+ ANL
Sbjct: 276 EVTPLQANL 284


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 ESTPIPANL 10
E TP+ ANL
Sbjct: 276 EVTPLQANL 284


>sp|Y1031_SACS2|UNCHARACTERIZED solute-binding protein SSO1031|Saccharolobus solfataricus (strain

Query: 4 TPIPANL 10
TP+PAN+
Sbjct: 131 TPVPANV 137


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 PIPANL 10
PIPAN+
Sbjct: 698 PIPANM 703




99|Sequence|491|500|IPANLSQNLE

>sp|MPTA1_METAR|GTP cyclohydrolase MptA 1|Methanocella arvoryzae (strain DSM 22066

Query: 3 ANLSQNLE 10
ANLS+NLE
Sbjct: 61 ANLSRNLE 68


>sp|MPTA_METLZ|GTP cyclohydrolase MptA|Methanocorpusculum labreanum (strain ATCC

Query: 3 ANLSQNLE 10
ANLS+N E
Sbjct: 59 ANLSRNFE 66


>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 3 ANLSQNLE 10
ANLS+N E
Sbjct: 68 ANLSRNFE 75


>sp|MPTA_METHJ|GTP cyclohydrolase MptA|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 ANLSQNLE 10
ANLS+N E
Sbjct: 70 ANLSRNFE 77


>sp|MPTA_METMJ|GTP cyclohydrolase MptA|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 ANLSQNLE 10
ANLS+N E
Sbjct: 58 ANLSRNFE 65


>sp|PUR8_METTH|ADENYLOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PANLSQNLE 10
P N+ +NLE
Sbjct: 351 PENIKRNLE 359


>sp|MPTA_METMA|GTP cyclohydrolase MptA|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ANLSQNLE 10
ANLS+N E
Sbjct: 63 ANLSRNFE 70


>sp|MPTA_METBF|GTP cyclohydrolase MptA|Methanosarcina barkeri (strain Fusaro /

Query: 3 ANLSQNLE 10
ANLS+N E
Sbjct: 63 ANLSRNFE 70


>sp|DPHB_METHJ|DIPHTHINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IPANLSQNL 9
I ANL QNL
Sbjct: 151 ILANLKQNL 159


>sp|MPTA_METAC|GTP cyclohydrolase MptA|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ANLSQNLE 10
ANLS+N E
Sbjct: 63 ANLSRNFE 70




100|Sequence|496|505|SQNLEAAAAT

***** No hits found ******


101|Sequence|501|510|AAAATQVAVS

***** No hits found ******


102|Sequence|506|515|QVAVSVPKRR

>sp|PYRB_IGNH4|ASPARTATE carbamoyltransferase catalytic subunit|Ignicoccus hospitalis

Query: 1 QVAVSVPKR 9
QVA SVP R
Sbjct: 286 QVAASVPVR 294




103|Sequence|511|520|VPKRRRKIKE

>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VPKRRRKIKE 10
+P+RRR++KE
Sbjct: 369 LPERRRRLKE 378


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KRRRKIKE 10
KRR++IKE
Sbjct: 151 KRRKEIKE 158


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PKRRRKIKE 10
P+RRR+I E
Sbjct: 66 PERRREISE 74


>sp|PGK_PYRAE|PHOSPHOGLYCERATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PKRRRKIKE 10
P+ RR+IKE
Sbjct: 102 PEARRQIKE 110


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VPKRRRKIKE 10
+P+RR+K++E
Sbjct: 365 LPERRKKLEE 374


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 PKRRRKIKE 10
P R RKI+E
Sbjct: 389 PARARKIRE 397


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VPKRRRKIKE 10
+PK KIKE
Sbjct: 131 IPKTLEKIKE 140


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PKRRRKIK 9
P+RRRK++
Sbjct: 590 PERRRKLE 597


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 1 VPKRRRKIKE 10
+P R KIKE
Sbjct: 34 LPHREEKIKE 43


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VPKRRRKIKE 10
VP++ RKI+E
Sbjct: 372 VPEKFRKIRE 381


>sp|RL18_STAMF|LARGE ribosomal subunit protein uL18|Staphylothermus marinus (strain

Query: 1 VPKRRRK 7
VPKRRR+
Sbjct: 9 VPKRRRR 15




104|Sequence|516|525|RKIKELNKKE

>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 1 RKIKELNK 8
RKI ELNK
Sbjct: 78 RKITELNK 85


>sp|Y1756_METM5|UNCHARACTERIZED solute-binding protein MmarC5_1756|Methanococcus maripaludis

Query: 1 RKIKELNK 8
RKI ELNK
Sbjct: 81 RKITELNK 88


>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 1 RKIKELNK 8
RKI ELNK
Sbjct: 66 RKITELNK 73


>sp|Y838_METJA|UNCHARACTERIZED protein MJ0838|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKIKELNKK 9
RKIKELN K
Sbjct: 70 RKIKELNNK 78


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RKIKELNKKE 10
RKI ELNK E
Sbjct: 352 RKITELNKDE 361


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 RKIKELNK 8
RKIKELN+
Sbjct: 218 RKIKELNE 225


>sp|Y871_METJA|UNCHARACTERIZED protein MJ0871|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KIKELNKKE 10
+I +LNKKE
Sbjct: 163 EINKLNKKE 171


>sp|PFDA_IGNH4|PREFOLDIN subunit alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RKIKELNKK 9
RK++ELN+K
Sbjct: 138 RKLEELNRK 146


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 2|Methanocaldococcus

Query: 3 IKELNKKE 10
+KE+NKKE
Sbjct: 182 VKEINKKE 189


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 RKIKELNKK 9
R +KEL+KK
Sbjct: 90 RPLKELSKK 98


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KIKELNKKE 10
KIKE+NK E
Sbjct: 398 KIKEINKVE 406


>sp|Y240_METJA|PUTATIVE adenylate cyclase MJ0240|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RKIKELNKKE 10
RKI+E+ KKE
Sbjct: 106 RKIREIYKKE 115




105|Sequence|521|530|LNKKEAVGDL

>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 4 KEAVGDL 10
+EA+GDL
Sbjct: 134 REAIGDL 140


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 NKKEAVGD 9
N+KE +GD
Sbjct: 3 NRKEIIGD 10




106|Sequence|526|535|AVGDLLDAFK

>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 AVGDLLDAF 9
AVG++LD F
Sbjct: 155 AVGNMLDQF 163


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 GDLLDAFK 10
GDL+D FK
Sbjct: 139 GDLVDVFK 146


>sp|SODM_HALMA|SUPEROXIDE dismutase [Mn]|Haloarcula marismortui (strain ATCC 43049

Query: 1 AVGDLLDAF 9
A GD +DAF
Sbjct: 174 ARGDFIDAF 182


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 3 GDLLDAFK 10
GDL+ AFK
Sbjct: 119 GDLMKAFK 126


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 AVGDLLDAF 9
AVG++L+AF
Sbjct: 247 AVGEVLEAF 255


>sp|KAE1_HYPBU|TRNA N6-adenosine threonylcarbamoyltransferase|Hyperthermus butylicus

Query: 1 AVGDLLDAF 9
A+G+LLD F
Sbjct: 185 ALGNLLDTF 193


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GDLLDAFK 10
GDL+ AFK
Sbjct: 167 GDLMKAFK 174


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 3 GDLLDAFK 10
GDL+ AFK
Sbjct: 167 GDLMKAFK 174


>sp|KAE1_AERPE|TRNA N6-adenosine threonylcarbamoyltransferase|Aeropyrum pernix (strain

Query: 1 AVGDLLDAF 9
A+G+LLD F
Sbjct: 164 ALGNLLDTF 172


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 3 GDLLDAFK 10
GDL+ AFK
Sbjct: 167 GDLMKAFK 174


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 3 GDLLDAFK 10
GDL+ AFK
Sbjct: 167 GDLMKAFK 174


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 AVGDLLDA 8
A GDLLDA
Sbjct: 235 AKGDLLDA 242


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GDLLDAFK 10
GDL+ AFK
Sbjct: 167 GDLMKAFK 174


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 3 GDLLDAFK 10
GDL+ AFK
Sbjct: 167 GDLMKAFK 174


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GDLLDAFK 10
GDL+ AFK
Sbjct: 167 GDLMKAFK 174


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 1 AVGDLLDA 8
A GDLLDA
Sbjct: 235 AKGDLLDA 242


>sp|KAE1_STAMF|TRNA N6-adenosine threonylcarbamoyltransferase|Staphylothermus marinus

Query: 2 VGDLLDAF 9
+G+LLD F
Sbjct: 158 IGNLLDTF 165


>sp|PURA_NATPD|ADENYLOSUCCINATE synthetase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VGDLLDA 8
+GDLLDA
Sbjct: 146 IGDLLDA 152


>sp|KAE1_SULTO|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfurisphaera tokodaii

Query: 1 AVGDLLDAF 9
A+G++LD F
Sbjct: 158 ALGNMLDTF 166


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 2 VGDLLDAFK 10
+GD LDAF+
Sbjct: 330 LGDALDAFE 338


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 AVGDLLDA 8
A GDLLDA
Sbjct: 235 AKGDLLDA 242


>sp|AROC_THEAC|CHORISMATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AVGDLLDAF 9
AVG ++D F
Sbjct: 20 AVGSIIDGF 28


>sp|PUR7_PYRHO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GDLLDAFK 10
GDL++A+K
Sbjct: 218 GDLIEAYK 225


>sp|PCNA2_SULAC|DNA polymerase sliding clamp 2|Sulfolobus acidocaldarius (strain ATCC

Query: 3 GDLLDAF 9
GDLLD F
Sbjct: 139 GDLLDEF 145


>sp|PUR7_PYRFU|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GDLLDAFK 10
GDL++A+K
Sbjct: 214 GDLIEAYK 221


>sp|DHYS_THEAC|PROBABLE deoxyhypusine synthase|Thermoplasma acidophilum (strain ATCC

Query: 2 VGDLLDAF 9
+GDL+D F
Sbjct: 22 LGDLMDQF 29




107|Sequence|531|540|LDAFKEANPA

>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LDAFKEAN 8
LD FKEAN
Sbjct: 270 LDVFKEAN 277


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 LDAFKEAN 8
LD FKEAN
Sbjct: 270 LDVFKEAN 277


>sp|SRP54_PYRFU|SIGNAL recognition particle 54 kDa|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AFKEANP 9
AFKEA P
Sbjct: 234 AFKEATP 240


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 3 AFKEANP 9
AFKEA P
Sbjct: 234 AFKEATP 240


>sp|SRP54_PYRHO|SIGNAL recognition particle 54 kDa|Pyrococcus horikoshii (strain ATCC

Query: 3 AFKEANP 9
AFKEA P
Sbjct: 234 AFKEATP 240


>sp|MCH_METVS|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LDAFKEAN 8
L+ FKEAN
Sbjct: 270 LEVFKEAN 277


>sp|SRP54_PYRAB|SIGNAL recognition particle 54 kDa|Pyrococcus abyssi (strain GE5 /

Query: 3 AFKEANP 9
AFKEA P
Sbjct: 234 AFKEATP 240


>sp|Y1063_METPE|UPF0173 metal-dependent hydrolase Mpal_1063|Methanosphaerula palustris

Query: 2 DAFKEA 7
DAFKEA
Sbjct: 193 DAFKEA 198


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 3 AFKEANP 9
AFKEA P
Sbjct: 234 AFKEATP 240


>sp|SRP54_THEKO|SIGNAL recognition particle 54 kDa|Thermococcus kodakarensis (strain ATCC

Query: 3 AFKEANP 9
AFKEA P
Sbjct: 234 AFKEATP 240


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 LDAFKEAN 8
L+ FKEAN
Sbjct: 270 LEVFKEAN 277


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDAFKEANPA 10
L FKE NP
Sbjct: 338 LSTFKEDNPG 347


>sp|DAPA_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 LDAFKEANP 9
+ A KEANP
Sbjct: 156 ITAIKEANP 164


>sp|DAPA_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 LDAFKEANP 9
+ A KEANP
Sbjct: 156 ITAIKEANP 164


>sp|DAPA_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 LDAFKEANP 9
+ A KEANP
Sbjct: 156 ITAIKEANP 164


>sp|DAPA_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LDAFKEANP 9
+ A KEANP
Sbjct: 156 ITAIKEANP 164


>sp|DAPA_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LDAFKEANP 9
+ A KEANP
Sbjct: 156 ISAVKEANP 164


>sp|DAPA_METJA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDAFKEANP 9
+ A KEANP
Sbjct: 157 ISAVKEANP 165


>sp|TRPB_METKA|TRYPTOPHAN synthase beta chain|Methanopyrus kandleri (strain AV19 /

Query: 2 DAFKEA 7
DAFKEA
Sbjct: 32 DAFKEA 37


>sp|FKBPS_METTL|SHORT-TYPE peptidyl-prolyl cis-trans isomerase|Methanothermococcus

Query: 2 DAFKEAN 8
DAFKEA+
Sbjct: 95 DAFKEAD 101


>sp|MCH_METMJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DAFKEAN 8
D FKEAN
Sbjct: 265 DIFKEAN 271


>sp|QUEC_METB6|7-CYANO-7-DEAZAGUANINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 LDAFKEANPA 10
L+AF+EA A
Sbjct: 201 LEAFREAGAA 210


>sp|DAPA_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 AFKEANP 9
A KEANP
Sbjct: 160 AIKEANP 166


>sp|Y2678_METMA|UNCHARACTERIZED serpin-like protein MM_2675|Methanosarcina mazei (strain ATCC

Query: 1 LDAFKEAN 8
+DAF++AN
Sbjct: 334 VDAFRQAN 341




108|Sequence|536|545|EANPAVPEVE

>sp|TRPCD_ARCFU|TRYPTOPHAN biosynthesis protein TrpCD|Archaeoglobus fulgidus (strain ATCC

Query: 3 NPAVPEVE 10
NPA PEV+
Sbjct: 397 NPARPEVQ 404


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 2 ANPAVPEVE 10
A+P +PE+E
Sbjct: 112 ASPQIPEIE 120


>sp|Y034_PYRHO|UPF0284 protein PH0034|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PAVPEVE 10
PA+PEVE
Sbjct: 110 PALPEVE 116


>sp|KAE1_CALMQ|TRNA N6-adenosine threonylcarbamoyltransferase|Caldivirga maquilingensis

Query: 3 NPAVPEVE 10
NP VP +E
Sbjct: 171 NPGVPHLE 178


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 1 EANPAVPEVE 10
EA P + EVE
Sbjct: 111 EAEPKIREVE 120




109|Sequence|541|550|VPEVENQPPA

>sp|AROE_META3|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus aeolicus (strain ATCC

Query: 2 PEVENQPP 9
P V+N+PP
Sbjct: 200 PNVDNKPP 207


>sp|APGM1_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanothermobacter thermautotrophicus

Query: 2 PEVENQPP 9
P+VE +PP
Sbjct: 167 PKVEGKPP 174


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 1 VPEVENQP 8
VP VEN P
Sbjct: 301 VPSVENMP 308


>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 1 VPEVENQPP 9
+P++ N PP
Sbjct: 234 IPKIINMPP 242


>sp|SYY_METMJ|TYROSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PEVENQP 8
PEVEN P
Sbjct: 237 PEVENNP 243


>sp|APGM_PYRAB|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus abyssi (strain GE5 /

Query: 2 PEVENQPP 9
P VE +PP
Sbjct: 166 PHVEGKPP 173


>sp|PYRB_THEVO|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma volcanium

Query: 2 PEVENQPPA 10
P+V+N P A
Sbjct: 274 PDVDNMPQA 282


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 VENQPPA 10
+EN+PPA
Sbjct: 490 LENKPPA 496


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 VENQPPA 10
+EN+PPA
Sbjct: 490 LENKPPA 496


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 VENQPPA 10
+EN+PPA
Sbjct: 490 LENKPPA 496


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 VENQPPA 10
+EN+PPA
Sbjct: 490 LENRPPA 496




110|Sequence|546|555|NQPPAGSNPG

>sp|SRP54_METAC|SIGNAL recognition particle 54 kDa|Methanosarcina acetivorans (strain

Query: 2 QPPAGSNP 9
+PPAG NP
Sbjct: 64 EPPAGMNP 71


>sp|SRP54_METTP|SIGNAL recognition particle 54 kDa|Methanothrix thermoacetophila (strain

Query: 2 QPPAGSNP 9
+PPAG NP
Sbjct: 64 KPPAGMNP 71


>sp|SRP54_METMA|SIGNAL recognition particle 54 kDa|Methanosarcina mazei (strain ATCC

Query: 3 PPAGSNP 9
PPAG NP
Sbjct: 65 PPAGMNP 71


>sp|SRP54_METBF|SIGNAL recognition particle 54 kDa|Methanosarcina barkeri (strain Fusaro

Query: 3 PPAGSNP 9
PPAG NP
Sbjct: 65 PPAGMNP 71


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 2 QPPAGSNP 9
+PPAG+ P
Sbjct: 64 EPPAGTTP 71


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PPAGSNPG 10
PP G+ PG
Sbjct: 180 PPGGAEPG 187


>sp|Y1450_METJA|UNCHARACTERIZED protein MJ1450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PAGSNPG 10
P GS+PG
Sbjct: 317 PRGSHPG 323


>sp|ENDA_METMA|TRNA-SPLICING endonuclease|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PAGSNPG 10
P GS+PG
Sbjct: 106 PRGSHPG 112


>sp|ENDA_METBU|TRNA-SPLICING endonuclease|Methanococcoides burtonii (strain DSM 6242

Query: 4 PAGSNPG 10
P GS+PG
Sbjct: 103 PRGSHPG 109


>sp|ENDA_METBF|TRNA-SPLICING endonuclease|Methanosarcina barkeri (strain Fusaro /

Query: 4 PAGSNPG 10
P GS+PG
Sbjct: 103 PRGSHPG 109


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PAGSNPG 10
P GS+PG
Sbjct: 103 PRGSHPG 109


>sp|GCS2_HALWD|GLUTAMATE--CYSTEINE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NQPPAG 6
N PPAG
Sbjct: 42 NHPPAG 47


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 NQPPAGSNPG 10
N+PP G++ G
Sbjct: 451 NRPPVGTHDG 460


>sp|ENGB_HALSA|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC

Query: 1 NQPPAGSNPG 10
+Q P G PG
Sbjct: 32 HQVPTGQKPG 41


>sp|ENGB_HALS3|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC

Query: 1 NQPPAGSNPG 10
+Q P G PG
Sbjct: 32 HQVPTGQKPG 41


>sp|RL10_METKA|LARGE ribosomal subunit protein uL10|Methanopyrus kandleri (strain AV19

Query: 2 QPPAGSNP 9
QPP+G P
Sbjct: 8 QPPSGYEP 15


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 4 PAGSNPG 10
PAG+ PG
Sbjct: 296 PAGTQPG 302




111|Sequence|551|560|GSNPGPESEG

>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GSNPGPESE 9
GS+P PE E
Sbjct: 291 GSDPPPEIE 299


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PGPESE 9
PGPE+E
Sbjct: 248 PGPEAE 253


>sp|DTDA_HYPBU|D-AMINOACYL-TRNA deacylase|Hyperthermus butylicus (strain DSM 5456

Query: 3 NPGPES 8
NPGPE+
Sbjct: 90 NPGPEA 95


>sp|HIS4_METAC|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina acetivorans

Query: 1 GSNPGPESE 9
G NPGP E
Sbjct: 182 GVNPGPTRE 190


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PGPESEG 10
PGP +EG
Sbjct: 118 PGPAAEG 124


>sp|Y431_NANEQ|UPF0215 protein NEQ431|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 SNPGP 6
SNPGP
Sbjct: 192 SNPGP 196


>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain ATCC

Query: 1 GSNPGPESEG 10
G++PG SEG
Sbjct: 315 GTHPGSASEG 324




112|Sequence|556|565|PESEGSGVPP

>sp|RNP4_SULAC|RIBONUCLEASE P protein component 4|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 EGSGVPP 10
EG G+PP
Sbjct: 102 EGKGIPP 108


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 1 PESEGSGV 8
P+SEGSGV
Sbjct: 844 PDSEGSGV 851


>sp|MTRD_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 1 PESEGSGVP 9
P +EG G+P
Sbjct: 122 PGTEGHGIP 130


>sp|Y521_ARCFU|UNCHARACTERIZED N-acetyltransferase AF_0521|Archaeoglobus fulgidus (strain ATCC

Query: 1 PESEGSG 7
PES GSG
Sbjct: 139 PESGGSG 145


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 1 PESEGSGV 8
PE++G G+
Sbjct: 535 PENQGKGI 542


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 1 PESEGSGV 8
PE++G G+
Sbjct: 536 PENQGKGI 543


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 2 ESEGSGVPP 10
ESEG +PP
Sbjct: 505 ESEGGDLPP 513




113|Sequence|561|570|SGVPPRPEEA

>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GVPPRPEEA 10
G+PP P+E+
Sbjct: 150 GLPPSPQES 158


>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 2 GVPPRPE 8
G PPRPE
Sbjct: 149 GCPPRPE 155


>sp|BACS1_HALSA|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 700922

Query: 1 SGVPPRPEEA 10
S PP PE+A
Sbjct: 222 SESPPAPEQA 231


>sp|BACS1_HALS3|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 29341

Query: 1 SGVPPRPEEA 10
S PP PE+A
Sbjct: 222 SESPPAPEQA 231


>sp|MBHJ_PYRFU|PROBABLE membrane-bound hydrogenase subunit mbhJ|Pyrococcus furiosus (strain

Query: 2 GVPPRPE 8
G PPRPE
Sbjct: 131 GCPPRPE 137


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 2 GVPPRPE 8
G PP PE
Sbjct: 128 GCPPSPE 134


>sp|FPOB_METMA|F(420)H(2) dehydrogenase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GVPPRPE 8
G PPRPE
Sbjct: 155 GCPPRPE 161


>sp|Y516_METJA|UNCHARACTERIZED protein MJ0516|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GVPPRPEE 9
G PPRP E
Sbjct: 116 GCPPRPSE 123


>sp|AGLI_HALVD|GLYCOSYLTRANSFERASE AglI|Haloferax volcanii (strain ATCC 29605

Query: 2 GVPPRP 7
G+PPRP
Sbjct: 242 GIPPRP 247


>sp|CBIZ_METMA|ADENOSYLCOBINAMIDE amidohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PPRPEE 9
PP PEE
Sbjct: 44 PPSPEE 49


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 4 PPRPEE 9
PPRPE+
Sbjct: 727 PPRPED 732


>sp|PURO_METKA|IMP cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 SGVPPR 6
SGVPPR
Sbjct: 85 SGVPPR 90


>sp|FRHG_METTH|COENZYME F420 hydrogenase subunit gamma|Methanothermobacter

Query: 2 GVPPRPE 8
G PP PE
Sbjct: 131 GCPPSPE 137


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SGVPPRPEE 9
SGV P PE+
Sbjct: 406 SGVAPEPED 414


>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SGVPPRP 7
SG+PPR
Sbjct: 100 SGIPPRA 106


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 3 VPPRPEE 9
+PPRP+E
Sbjct: 24 LPPRPDE 30


>sp|Y286_KORCO|UPF0282 protein Kcr_0286|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GVPPRPEE 9
G+PP P+E
Sbjct: 41 GLPPHPKE 48


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 1 SGVPPRP 7
SG+PP P
Sbjct: 433 SGIPPAP 439


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 SGVPPRP 7
SG+PP P
Sbjct: 434 SGIPPAP 440


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GVPPRPEE 9
G P +PEE
Sbjct: 402 GTPKKPEE 409


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 1 SGVPPRP 7
SG+PP P
Sbjct: 434 SGIPPAP 440


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 5 PRPEEA 10
P+PEEA
Sbjct: 476 PKPEEA 481


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 2 GVPPRPEE 9
G P +PEE
Sbjct: 402 GTPKKPEE 409


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 2 GVPPRPE 8
G+P RPE
Sbjct: 554 GLPKRPE 560




114|Sequence|566|575|RPEEADETWD

>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PEEADETWD 10
PEEA E WD
Sbjct: 225 PEEALELWD 233


>sp|Y1562_ARCFU|UNCHARACTERIZED protein AF_1562|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RPEEADETW 9
+PEE E W
Sbjct: 49 KPEELTELW 57


>sp|IF1A_METKA|TRANSLATION initiation factor 1A|Methanopyrus kandleri (strain AV19 /

Query: 2 PEEADETW 9
PE AD TW
Sbjct: 73 PERADVTW 80


>sp|KAE1_THEGJ|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus

Query: 1 RPEEADETW 9
R +E D TW
Sbjct: 316 RTDEVDVTW 324


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 2 PEEADETW 9
PEEA E W
Sbjct: 752 PEEAREAW 759


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides burtonii

Query: 1 RPEEADETW 9
RP+ D TW
Sbjct: 319 RPDTVDVTW 327


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 RPEEADETWD 10
R E D TWD
Sbjct: 168 RSGETDSTWD 177


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PEEADETW 9
PE+A E W
Sbjct: 496 PEKAKEIW 503


>sp|Y51B_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514.2|Methanocaldococcus jannaschii

Query: 1 RPEEADE 7
+PEEA+E
Sbjct: 332 KPEEAEE 338


>sp|AGOG_AERPE|N-GLYCOSYLASE/DNA lyase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RPEEADETWD 10
RPE A W
Sbjct: 215 RPEAAQRAWG 224


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 RPEEADETW 9
RP+E TW
Sbjct: 315 RPDEVSVTW 323


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PEEADETWD 10
PEE E WD
Sbjct: 225 PEENLELWD 233


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RPEEADETWD 10
RPE+A W+
Sbjct: 220 RPEKALHVWE 229


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RPEEADET 8
RP EAD+T
Sbjct: 400 RPPEADDT 407


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PEEADETWD 10
PEE E WD
Sbjct: 225 PEENLELWD 233


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PEEADETW 9
PE D+ W
Sbjct: 19 PESVDDIW 26




115|Sequence|571|580|DETWDSKEDK

>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 ETWDSKED 9
ETW+S ED
Sbjct: 176 ETWNSLED 183


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 3 TWDSKED 9
TWD+K D
Sbjct: 110 TWDAKND 116


>sp|DEOC_METAR|DEOXYRIBOSE-PHOSPHATE aldolase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DETWDSKE 8
+ETWD+ E
Sbjct: 80 EETWDAVE 87


>sp|Y441_NANEQ|PROTEIN NEQ441|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DETWDSKE 8
+E WD+KE
Sbjct: 139 EEGWDAKE 146




116|Sequence|576|585|SKEDKIHNAE

>sp|IDSA_METJA|SHORT chain isoprenyl diphosphate synthase|Methanocaldococcus

Query: 2 KEDKIHNA 9
K+DK++NA
Sbjct: 31 KDDKLYNA 38




117|Sequence|581|590|IHNAENIQPG

>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 2 HNAENIQP 9
HN +N++P
Sbjct: 277 HNVDNVKP 284


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 2 HNAENIQP 9
HN +N++P
Sbjct: 275 HNVDNVKP 282


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IHNAENIQP 9
+H+ +N+QP
Sbjct: 137 VHDLKNVQP 145


>sp|NUCS_PYRAE|ENDONUCLEASE NucS|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IHNAENIQP 9
+H AE QP
Sbjct: 65 VHEAEKAQP 73


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 1 IHNAENIQPG 10
+H+ ENI G
Sbjct: 37 VHDPENISAG 46


>sp|G1PDH_HALLT|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IHNAENIQPG 10
+ NA+ I+PG
Sbjct: 206 VENADMIRPG 215


>sp|RL4_HALSA|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain ATCC

Query: 3 NAENIQPG 10
NAE++ PG
Sbjct: 223 NAEDLAPG 230


>sp|RL4_HALS3|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain ATCC

Query: 3 NAENIQPG 10
NAE++ PG
Sbjct: 223 NAEDLAPG 230


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IHNAENIQP 9
IH+A+ ++P
Sbjct: 141 IHDADKVKP 149


>sp|RL4_HALLT|LARGE ribosomal subunit protein uL4|Halorubrum lacusprofundi (strain ATCC

Query: 3 NAENIQPG 10
NAE++ PG
Sbjct: 221 NAEDLAPG 228


>sp|IF2A_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 5 ENIQPG 10
ENI+PG
Sbjct: 171 ENIEPG 176


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 IHNAENIQPG 10
+H +N+ PG
Sbjct: 126 VHVGDNVVPG 135




118|Sequence|586|595|NIQPGEQKYE

>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IQPGEQKYE 10
I PG+QKY+
Sbjct: 220 IIPGKQKYD 228


>sp|AROA_METAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 IQPGEQKYE 10
I PG+QKY+
Sbjct: 220 IIPGKQKYD 228


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 IQPGEQKY 9
I PG QKY
Sbjct: 220 IIPGNQKY 227


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 NIQPGEQKY 9
N++PGE+ Y
Sbjct: 124 NVKPGEEVY 132


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PGEQKYE 10
PG+Q+YE
Sbjct: 702 PGKQEYE 708


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 4 PGEQKYE 10
PGE KY+
Sbjct: 464 PGESKYD 470


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 2 IQPGEQKY 9
I+PGE+ Y
Sbjct: 59 IKPGEKAY 66


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 2 IQPGEQKYE 10
+ PG +KYE
Sbjct: 1 MNPGIEKYE 9


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PGEQKY 9
PGE KY
Sbjct: 138 PGESKY 143


>sp|RL10E_HALSA|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain ATCC

Query: 1 NIQPGEQKY 9
IQPG+Q +
Sbjct: 128 RIQPGDQLF 136


>sp|RL10E_HALS3|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain ATCC

Query: 1 NIQPGEQKY 9
IQPG+Q +
Sbjct: 128 RIQPGDQLF 136


>sp|IF2A_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 NIQPGEQKYE 10
NI+PG K E
Sbjct: 172 NIEPGRVKIE 181




119|Sequence|591|600|EQKYEYKSDQ

***** No hits found ******


120|Sequence|596|605|YKSDQWKPLN

>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KSDQWKPL 9
+SDQW+PL
Sbjct: 1057 ESDQWRPL 1064


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YKSDQWKPLN 10
+KSD+ KPLN
Sbjct: 734 WKSDEGKPLN 743


>sp|Y070_ARCFU|UNCHARACTERIZED protein AF_0070|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DQWKPL 9
+QWKPL
Sbjct: 254 NQWKPL 259


>sp|RNZ_THEGJ|RIBONUCLEASE Z|Thermococcus gammatolerans (strain DSM 15229

Query: 1 YKSDQWKPLN 10
YKS +WK N
Sbjct: 299 YKSGEWKREN 308


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YKSDQWKPLN 10
+KSDQ PLN
Sbjct: 739 WKSDQGMPLN 748


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YKSDQWKPLN 10
+KSDQ PLN
Sbjct: 739 WKSDQGMPLN 748


>sp|TRM56_NITMS|TRNA (cytidine(56)-2'-O)-methyltransferase|Nitrosopumilus maritimus

Query: 4 DQWKPL 9
D WKP+
Sbjct: 64 DSWKPI 69


>sp|RL15_PYRNV|LARGE ribosomal subunit protein uL15|Pyrobaculum neutrophilum (strain

Query: 3 SDQWKPLN 10
S +W+P+N
Sbjct: 73 SIEWRPIN 80


>sp|RL15_PYRAE|LARGE ribosomal subunit protein uL15|Pyrobaculum aerophilum (strain

Query: 3 SDQWKPLN 10
S +W+P+N
Sbjct: 73 SIEWRPIN 80


>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 1 YKSDQWKPLN 10
Y +W PLN
Sbjct: 448 YDIPEWVPLN 457


>sp|TRUA_THEVO|TRNA pseudouridine synthase A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YKSDQWKPLN 10
YK +KPLN
Sbjct: 212 YKDLSFKPLN 221


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KSDQWKPL 9
+ D W+PL
Sbjct: 147 REDTWEPL 154


>sp|RL15_PYRCJ|LARGE ribosomal subunit protein uL15|Pyrobaculum calidifontis (strain

Query: 3 SDQWKPLN 10
S +W+P+N
Sbjct: 73 SVEWRPIN 80


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 3 SDQWKPLN 10
+D W PLN
Sbjct: 161 ADNWYPLN 168


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 SDQWKPLN 10
+D W PLN
Sbjct: 161 ADDWYPLN 168


>sp|RL15_PYRAR|LARGE ribosomal subunit protein uL15|Pyrobaculum arsenaticum (strain

Query: 5 QWKPLN 10
+W+P+N
Sbjct: 75 EWRPIN 80


>sp|ARGDC_STAMF|ARGININE decarboxylase proenzyme|Staphylothermus marinus (strain ATCC 43588

Query: 2 KSDQWKPLN 10
KSD W+ N
Sbjct: 95 KSDPWRAFN 103


>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KSDQWKPLN 10
++ +W+PL+
Sbjct: 14 RAQEWRPLD 22


>sp|RL15_PYRIL|LARGE ribosomal subunit protein uL15|Pyrobaculum islandicum (strain DSM

Query: 5 QWKPLN 10
+W+P+N
Sbjct: 75 EWRPIN 80




121|Sequence|601|610|WKPLNLEEKK

>sp|GATD_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus vannielii (strain ATCC

Query: 1 WKPLNLE 7
+KPLNLE
Sbjct: 70 FKPLNLE 76


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PLNLEE 8
PLNLEE
Sbjct: 267 PLNLEE 272


>sp|DTDA_META3|D-AMINOACYL-TRNA deacylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 WKPLNLEEKK 10
WK +N E+KK
Sbjct: 237 WKGINSEDKK 246


>sp|Y360_CALMQ|PROTEIN Cmaq_0360|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 WKPLNLEEKK 10
+KP NLE+ K
Sbjct: 2 FKPYNLEQGK 11


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WKPLNLEEKK 10
W+P LE+K+
Sbjct: 425 WEPYALEDKE 434


>sp|PYRI_METM7|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 1 WKPLNLEEK 9
+K LN+EEK
Sbjct: 28 YKILNIEEK 36


>sp|AROD_METST|3-DEHYDROQUINATE dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 KPLNLEE 8
KPLN+E+
Sbjct: 163 KPLNIED 169


>sp|PYRI_METMP|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 1 WKPLNLEEK 9
+K LN+EEK
Sbjct: 28 YKILNIEEK 36


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WKPLNLEE 8
+KP+NL E
Sbjct: 1508 YKPVNLSE 1515


Query: 1 WKPLNLEE 8
+KP+NL E
Sbjct: 1841 YKPVNLSE 1848


>sp|PYRI_METM6|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 1 WKPLNLEEK 9
+K LN+EEK
Sbjct: 28 YKILNIEEK 36


>sp|PYRI_METM5|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 1 WKPLNLEEK 9
+K LN+EEK
Sbjct: 28 YKILNIEEK 36


>sp|SRP54_METTH|SIGNAL recognition particle 54 kDa|Methanothermobacter thermautotrophicus

Query: 1 WKPLNLEEKK 10
W+P LE+ K
Sbjct: 138 WRPAALEQLK 147


>sp|TBP_METTH|TATA-BOX-BINDING protein|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WKPLNLE 7
KPLNLE
Sbjct: 109 GKPLNLE 115




122|Sequence|606|615|LEEKKRYDRE

>sp|RPO1C_THEON|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus onnurineus (strain NA1)

Query: 1 LEEKKRYDRE 10
L+EK RYDRE
Sbjct: 120 LDEKHRYDRE 129


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 1 LEEKKRYDRE 10
L+E+ RYDRE
Sbjct: 120 LDEEHRYDRE 129


>sp|RPO1C_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus horikoshii (strain ATCC

Query: 1 LEEKKRYDRE 10
L+E+ RYDRE
Sbjct: 122 LDEEHRYDRE 131


>sp|RPO1C_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus abyssi (strain GE5 /

Query: 1 LEEKKRYDRE 10
L+E+ RYDRE
Sbjct: 122 LDEEHRYDRE 131


>sp|XPB2_SULTO|DNA 3'-5' translocase XPB2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EEKKRYD 8
EEKKRYD
Sbjct: 249 EEKKRYD 255


>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain ATCC

Query: 1 LEEKKRYDRE 10
L+E+ RYDR+
Sbjct: 120 LDEEHRYDRD 129


>sp|RPO1C_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LEEKKRYDR 9
L+E+ RYDR
Sbjct: 122 LDEEHRYDR 130


>sp|SUI1_HYPBU|PROTEIN translation factor SUI1 homolog|Hyperthermus butylicus (strain

Query: 3 EKKRYDRE 10
EK+RY RE
Sbjct: 32 EKRRYGRE 39


>sp|RNZ_PICTO|RIBONUCLEASE Z|Picrophilus torridus (strain ATCC 700027

Query: 1 LEEKKRYD 8
+EE K+YD
Sbjct: 121 MEENKKYD 128


>sp|Y202_METJA|UNCHARACTERIZED protein MJ0202|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEEKKRYDRE 10
+EE K+YD++
Sbjct: 187 MEEIKKYDKD 196


>sp|COMB_THEVO|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma volcanium (strain

Query: 3 EKKRYDRE 10
E K YDRE
Sbjct: 159 EGKNYDRE 166


>sp|SDO1_THEKO|RIBOSOME maturation protein SDO1 homolog|Thermococcus kodakarensis (strain

Query: 1 LEEKKRY 7
LE+KKRY
Sbjct: 97 LEDKKRY 103




123|Sequence|611|620|RYDREFLLGF

>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 YDREFLLGF 10
YDREF+ F
Sbjct: 7 YDREFVRTF 15


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 RYDREFLLGF 10
R+DREF+ F
Sbjct: 5 RHDREFVRTF 14


>sp|AATF_METLZ|A-TYPE ATP synthase subunit F|Methanocorpusculum labreanum (strain ATCC

Query: 3 DREFLLGF 10
++EF+LGF
Sbjct: 8 NKEFVLGF 15


>sp|MDH_SULTO|MALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RYDREFLL 8
RY REF++
Sbjct: 131 RYSREFVI 138


>sp|DLDH2_HALMA|DIHYDROLIPOYL dehydrogenase 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 DREFLLG 9
D EFLLG
Sbjct: 409 DEEFLLG 415


>sp|FDHD_SULTO|SULFUR carrier protein FdhD|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DREFLLGF 10
D+E +LGF
Sbjct: 51 DKELVLGF 58


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 RYDREFLLGF 10
RY R F GF
Sbjct: 357 RYGRSFATGF 366


>sp|RS9_THEKO|SMALL ribosomal subunit protein uS9|Thermococcus kodakarensis (strain

Query: 1 RYDREFLLG 9
+YDR L+G
Sbjct: 101 KYDRTMLVG 109


>sp|RPO1C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 1 RYDREFL 7
RYD EF+
Sbjct: 193 RYDEEFV 199


>sp|RS9_PYRFU|SMALL ribosomal subunit protein uS9|Pyrococcus furiosus (strain ATCC

Query: 1 RYDREFLLG 9
+YDR L+G
Sbjct: 101 KYDRTMLVG 109


>sp|RS9_THESM|SMALL ribosomal subunit protein uS9|Thermococcus sibiricus (strain DSM

Query: 1 RYDREFLLG 9
+YDR L+G
Sbjct: 109 KYDRTMLVG 117


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RYDREFLLGF 10
RYD EF+ F
Sbjct: 137 RYDGEFICRF 146


>sp|RS9_PYRAB|SMALL ribosomal subunit protein uS9|Pyrococcus abyssi (strain GE5 /

Query: 1 RYDREFLLG 9
+YDR L+G
Sbjct: 101 KYDRTMLVG 109


>sp|RS9_PYRHO|SMALL ribosomal subunit protein uS9|Pyrococcus horikoshii (strain ATCC

Query: 1 RYDREFLLG 9
+YDR L+G
Sbjct: 101 KYDRTMLVG 109


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YDREFL 7
YDRE+L
Sbjct: 565 YDREYL 570


>sp|LPLAN_THEAC|LIPOATE-PROTEIN ligase A subunit 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RYDREFLLGF 10
R+DR ++G+
Sbjct: 40 RHDRSVIIGY 49


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 2 YDREFLLG 9
YDRE L+G
Sbjct: 438 YDRENLVG 445


>sp|GCH3_SACI3|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.27)

Query: 2 YDREFLL 8
YDRE+L+
Sbjct: 20 YDREWLI 26


>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YDREFLLGF 10
Y+REFL F
Sbjct: 330 YNREFLKDF 338


>sp|GCH3_SACI6|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YDREFLL 8
YDRE+L+
Sbjct: 20 YDREWLI 26


>sp|GCH3_SACI4|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YDREFLL 8
YDRE+L+
Sbjct: 20 YDREWLI 26


>sp|GCH3_SACS2|GTP cyclohydrolase III|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YDREFLL 8
YDRE+L+
Sbjct: 20 YDREWLI 26


>sp|GCH3_SACI2|GTP cyclohydrolase III|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YDREFLL 8
YDRE+L+
Sbjct: 20 YDREWLI 26


>sp|GCH3_SACI1|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YDREFLL 8
YDRE+L+
Sbjct: 20 YDREWLI 26


>sp|GCH3_SACI7|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YDREFLL 8
YDRE+L+
Sbjct: 20 YDREWLI 26




124|Sequence|616|625|FLLGFQFIFA

>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 FLLGFQFIFA 10
FL GF F++A
Sbjct: 1018 FLAGFGFLYA 1027


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 LLGFQFIFA 10
LLGF IFA
Sbjct: 70 LLGFTVIFA 78


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 LLGFQFIFA 10
LLGF IFA
Sbjct: 70 LLGFTVIFA 78


>sp|TRPD_PYRIL|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LGFQFIFA 10
+GF F+FA
Sbjct: 143 IGFAFVFA 150


>sp|GGGPS_THEPD|GERANYLGERANYLGLYCERYL phosphate synthase|Thermofilum pendens (strain DSM 2475

Query: 3 LGFQFIF 9
+GFQF++
Sbjct: 167 MGFQFVY 173


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 3 LGFQFIFA 10
+GF F+FA
Sbjct: 145 VGFAFVFA 152


>sp|TRPD_PYRAR|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 LGFQFIFA 10
+GF F+FA
Sbjct: 145 VGFAFVFA 152


>sp|TRPD_PYRAE|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LGFQFIFA 10
+GF F+FA
Sbjct: 145 VGFAFVFA 152


>sp|Y213_METKA|UPF0282 protein MK0213|Methanopyrus kandleri (strain AV19 /

Query: 1 FLLGFQF 7
+LLGF+F
Sbjct: 214 YLLGFRF 220


>sp|TRPD_AERPE|ANTHRANILATE phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LGFQFIFA 10
LGF F++A
Sbjct: 152 LGFTFLYA 159




125|Sequence|621|630|QFIFASMQKP

***** No hits found ******


126|Sequence|626|635|SMQKPEGLPH

>sp|CDC61_SULAC|ORC1-TYPE DNA replication protein 1|Sulfolobus acidocaldarius (strain ATCC

Query: 5 PEGLPH 10
PE LPH
Sbjct: 30 PEALPH 35


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SMQKPEGLPH 10
S++ PEGLP
Sbjct: 34 SIKLPEGLPQ 43


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 5 PEGLPH 10
PE LPH
Sbjct: 31 PENLPH 36


>sp|SECY_SULAC|PROTEIN translocase subunit SecY|Sulfolobus acidocaldarius (strain ATCC

Query: 5 PEGLPH 10
P+G+PH
Sbjct: 326 PQGVPH 331


>sp|RRP41_PYRHO|EXOSOME complex component Rrp41|Pyrococcus horikoshii (strain ATCC

Query: 2 MQKPEGL 8
M+KPEGL
Sbjct: 2 MEKPEGL 8


>sp|RRP41_PYRAB|EXOSOME complex component Rrp41|Pyrococcus abyssi (strain GE5 /

Query: 2 MQKPEGL 8
M+KPEGL
Sbjct: 2 MEKPEGL 8


>sp|HEM3_METAC|PROBABLE porphobilinogen deaminase|Methanosarcina acetivorans (strain ATCC

Query: 4 KPEGLP 9
+PEGLP
Sbjct: 83 RPEGLP 88


>sp|PDAD_METAR|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocella arvoryzae (strain DSM 22066

Query: 2 MQKPEGLP 9
+QK EGLP
Sbjct: 54 VQKSEGLP 61


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 MQKPEGLPH 10
M+K G PH
Sbjct: 278 MEKRHGTPH 286


>sp|SYY_THEVO|TYROSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 KPEGLPH 10
+P G+PH
Sbjct: 35 EPSGIPH 41


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 QKPEGLP 9
+KP+GLP
Sbjct: 82 EKPKGLP 88


>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 KPEGLPH 10
+P G+PH
Sbjct: 36 EPSGIPH 42


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 SMQKPEGL 8
S+QKP GL
Sbjct: 474 SIQKPGGL 481


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SMQKPEGL 8
S+QKP GL
Sbjct: 474 SIQKPGGL 481


>sp|PURE_METJA|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SMQKPEGLP 9
S+Q P G+P
Sbjct: 95 SVQMPPGIP 103


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 1 SMQKPEGL 8
S+QKP GL
Sbjct: 474 SIQKPGGL 481


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 1 SMQKPEGL 8
S+QKP GL
Sbjct: 474 SIQKPGGL 481


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SMQKPEGL 8
S+QKP GL
Sbjct: 474 SIQKPGGL 481


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PEGLPH 10
P GLPH
Sbjct: 72 PSGLPH 77


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 1 SMQKPEGL 8
S+QKP GL
Sbjct: 474 SIQKPGGL 481


>sp|RL10E_PYRAE|LARGE ribosomal subunit protein uL16|Pyrobaculum aerophilum (strain ATCC

Query: 4 KPEGLPH 10
KPE LPH
Sbjct: 142 KPEHLPH 148




127|Sequence|631|640|EGLPHISDVV

>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGLPHISD 8
EGLPHI +
Sbjct: 325 EGLPHIHE 332


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EGLPHISDV 9
EGLP++ D+
Sbjct: 722 EGLPNVDDI 730


>sp|SURE_PYRAR|5'-NUCLEOTIDASE SurE|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GLPHISDVV 10
GLPH DVV
Sbjct: 160 GLPHGVDVV 168


>sp|IF2A_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 EGLPHISDV 9
EG+ HIS+V
Sbjct: 43 EGMVHISEV 51


>sp|IF2A_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 1 EGLPHISDV 9
EG+ HIS+V
Sbjct: 38 EGMIHISEV 46


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EGLPHISDV 9
EGLPH V
Sbjct: 224 EGLPHPKSV 232


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 EGLPHISDVV 10
EGL HI VV
Sbjct: 685 EGLQHIDKVV 694


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GLPHISDVV 10
GLPHI +V
Sbjct: 228 GLPHIMPLV 236


>sp|HFLX_HYPBU|GTPASE HflX|Hyperthermus butylicus (strain DSM 5456

Query: 2 GLPHISDV 9
GLPHI+ V
Sbjct: 192 GLPHIAIV 199


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EGLPHISDVV 10
EGL HIS+ V
Sbjct: 383 EGLEHISEPV 392


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 EGLPHISDV 9
EG+P +SDV
Sbjct: 118 EGVPGLSDV 126


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EGLPHISDVV 10
EGL HIS+ V
Sbjct: 383 EGLDHISEPV 392


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 2 GLPHISDVV 10
G P I DVV
Sbjct: 229 GFPKIKDVV 237


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 EGLPH 5
EGLPH
Sbjct: 57 EGLPH 61


>sp|DAPA_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LPHISDVV 10
L HISDV+
Sbjct: 166 LSHISDVI 173


>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GLPHISDVV 10
G+PHI+ V
Sbjct: 39 GIPHIATAV 47


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 EGLPH 5
EGLPH
Sbjct: 51 EGLPH 55


>sp|IF2A_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain

Query: 1 EGLPHISDV 9
EG HIS+V
Sbjct: 38 EGFMHISEV 46


>sp|IF2A_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 1 EGLPHISDV 9
EG HIS+V
Sbjct: 38 EGFMHISEV 46


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC

Query: 1 EGLPH 5
EGLPH
Sbjct: 51 EGLPH 55


>sp|IF2A_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 1 EGLPHISDV 9
EG HIS+V
Sbjct: 38 EGFMHISEV 46


>sp|URE23_SULTO|UREASE subunit gamma/beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EGLPHISDVV 10
EG+P + D+V
Sbjct: 71 EGVPELLDLV 80


>sp|IF2A_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 EGLPHISDV 9
EG HIS+V
Sbjct: 38 EGFMHISEV 46


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 4 PHISDVV 10
PH+ DVV
Sbjct: 314 PHVDDVV 320


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EGLPHI 6
EG+PH+
Sbjct: 329 EGIPHL 334


>sp|Y920_METJA|UNCHARACTERIZED protein MJ0920|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGLPHISDVV 10
EG+P + D++
Sbjct: 170 EGIPELLDII 179


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 EGLPHISDV 9
EG PH+ V
Sbjct: 462 EGAPHVERV 470


>sp|SYY_THEVO|TYROSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GLPHISDVV 10
G+PH++ V
Sbjct: 38 GIPHVATAV 46


>sp|HISX_METMP|HISTIDINOL dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EGLPHISDVV 10
EGL ISD+V
Sbjct: 394 EGLLGISDIV 403


>sp|Y920_THESM|UPF0200 protein TSIB_0920|Thermococcus sibiricus (strain DSM 12597

Query: 2 GLPHIS 7
G+PH+S
Sbjct: 24 GIPHVS 29


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 2 GLPHISDV 9
G+P ISDV
Sbjct: 96 GVPGISDV 103


>sp|Y038_PYRAB|UPF0284 protein PYRAB00380|Pyrococcus abyssi (strain GE5 /

Query: 5 HISDVV 10
HISDVV
Sbjct: 94 HISDVV 99


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 4 PHISDVV 10
PH+ DVV
Sbjct: 314 PHLDDVV 320




128|Sequence|636|645|ISDVVLDKAN

>sp|PGP_SULTO|PHOSPHOGLYCOLATE phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ISDVVLDKAN 10
ISD+VLDK +
Sbjct: 191 ISDIVLDKED 200


>sp|CFBA_METMP|SIROHYDROCHLORIN cobaltochelatase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ISDVVLDKAN 10
I D+VLD+AN
Sbjct: 133 IIDIVLDRAN 142


>sp|PGP_METKA|PHOSPHOGLYCOLATE phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 ISDVVLDKAN 10
I+DVVLD N
Sbjct: 206 IADVVLDAEN 215


>sp|PSTOM_PYRAB|STOMATIN homolog PYRAB06580|Pyrococcus abyssi (strain GE5 /

Query: 1 ISDVVLDKAN 10
ISDV DK+N
Sbjct: 225 ISDVASDKSN 234




129|Sequence|641|650|LDKANKTPLR

>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 ANKTPLR 10
ANKTPL+
Sbjct: 98 ANKTPLK 104


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LDKANKTPLR 10
+D+A + PLR
Sbjct: 621 IDRAGRDPLR 630


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LDKANKTPLR 10
L+KA KTP R
Sbjct: 91 LEKALKTPAR 100


>sp|KHSE_NATPD|HOMOSERINE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LDKANKTPLR 10
++KAN+T +R
Sbjct: 33 IEKANRTTIR 42


>sp|RRP42_PYRAE|EXOSOME complex component Rrp42|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LDKANKTPL 9
LD+ NK PL
Sbjct: 183 LDRNNKAPL 191


>sp|CDC6K_HALMA|ORC1-TYPE DNA replication protein 11|Haloarcula marismortui (strain ATCC

Query: 1 LDKANKTPLR 10
LD+ KTP R
Sbjct: 308 LDQEGKTPAR 317


>sp|PHP_SACS2|ARYLDIALKYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 1 LDKANKTPLR 10
+DK N+T LR
Sbjct: 232 VDKRNETTLR 241


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 2 DKANKTPLR 10
DK+ KTP++
Sbjct: 439 DKSAKTPIK 447




130|Sequence|646|655|KTPLRPLDPT

>sp|APGM_THEVO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PLRPLDPT 10
P+RPLDP+
Sbjct: 175 PIRPLDPS 182


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KTPLRPLDP 9
K L+PLDP
Sbjct: 398 KAVLKPLDP 406


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 RPLDPT 10
RPLDP+
Sbjct: 506 RPLDPS 511


>sp|BRIX_METBU|PROBABLE Brix domain-containing ribosomal biogenesis|Methanococcoides

Query: 2 TPLRPLDPT 10
TPL+ L+P+
Sbjct: 87 TPLKALEPS 95


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 2 TPLRPLDPT 10
TP+RP+D T
Sbjct: 512 TPVRPVDGT 520


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PLRPLDP 9
PLRP+ P
Sbjct: 653 PLRPVKP 659


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 3 PLRPLDPT 10
P RP+D T
Sbjct: 186 PFRPVDKT 193


>sp|Y1213_ARCFU|UNCHARACTERIZED protein AF_1213|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KTPLRPL 7
KTPL PL
Sbjct: 28 KTPLSPL 34


>sp|IF2B_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 KTPLRPL 7
KTP++PL
Sbjct: 133 KTPVKPL 139


>sp|COFC_METPE|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 PLRPLDP 9
P RPL+P
Sbjct: 8 PFRPLNP 14


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 KTPLRPL 7
+TPL+PL
Sbjct: 526 RTPLKPL 532


>sp|DAPA_NATPD|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KTPLRPLDP 9
++PL PL P
Sbjct: 271 RSPLNPLQP 279


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 2 TPLRPL 7
TPLRP+
Sbjct: 300 TPLRPM 305


>sp|CBIA_HALMA|COBYRINATE a,c-diamide synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TPLRPLDP 9
TP R LDP
Sbjct: 54 TPSRTLDP 61


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LRPLDP 9
LRP+DP
Sbjct: 256 LRPVDP 261


>sp|RPO6_METJA|DNA-DIRECTED RNA polymerase subunit Rpo6|Methanocaldococcus jannaschii (strain

Query: 1 KTPLRPLDP 9
K PL+P+ P
Sbjct: 46 KVPLKPIRP 54




131|Sequence|651|660|PLDPTRLQGI

>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 PLDPTRLQ 8
PLDP+RL+
Sbjct: 493 PLDPSRLK 500


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PLDPTRLQ 8
PLDPT+ Q
Sbjct: 424 PLDPTKTQ 431


>sp|FPOJ_METMA|F(420)H(2) dehydrogenase subunit J|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PLDPTRLQGI 10
P DP+ ++GI
Sbjct: 131 PADPSNIEGI 140


>sp|CCA_PICTO|CCA-ADDING enzyme|Picrophilus torridus (strain ATCC 700027

Query: 1 PLDPTRLQG 9
P+DPTR G
Sbjct: 221 PVDPTRNAG 229


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 2 LDPTRLQGI 10
LDP L+GI
Sbjct: 211 LDPAELKGI 219


>sp|ENDA_METMA|TRNA-SPLICING endonuclease|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LDPTRLQ 8
LDP RLQ
Sbjct: 212 LDPERLQ 218


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LDPTRLQ 8
LDP RLQ
Sbjct: 209 LDPERLQ 215


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 PLDPTRLQGI 10
P DP QGI
Sbjct: 311 PPDPIMFQGI 320


>sp|SURE_AERPE|5'-NUCLEOTIDASE SurE|Aeropyrum pernix (strain ATCC 700893

Query: 1 PLDPTR 6
PLDP+R
Sbjct: 239 PLDPSR 244


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PLDPTR 6
P+DPTR
Sbjct: 430 PVDPTR 435


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LDPTRLQ 8
+DPTRL+
Sbjct: 48 IDPTRLR 54


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PLDPTR 6
P+DPTR
Sbjct: 453 PVDPTR 458


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DPTRLQ 8
DPTR+Q
Sbjct: 903 DPTRIQ 908


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PLDPTRLQ 8
PLDPT+ +
Sbjct: 444 PLDPTKTK 451


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DPTRLQ 8
DPTR+Q
Sbjct: 903 DPTRIQ 908




132|Sequence|656|665|RLQGINCGPD

>sp|SECF_PYRFU|PROTEIN-EXPORT membrane protein SecF|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LQGINCGPD 10
LQG+N PD
Sbjct: 63 LQGVNVSPD 71


>sp|Y1225_ARCFU|UNCHARACTERIZED protein AF_1225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GINCGP 9
GINC P
Sbjct: 60 GINCTP 65


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 RLQGINCGPD 10
R +GI C P+
Sbjct: 173 RSEGIECEPE 182


>sp|HIS4_METAC|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina acetivorans

Query: 2 LQGINCGP 9
+QG+N GP
Sbjct: 180 MQGVNPGP 187


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 INCGPD 10
INCG D
Sbjct: 453 INCGKD 458


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RLQGINCG 8
R++GIN G
Sbjct: 805 RIEGINIG 812


>sp|HYD2B_PYRFU|SULFHYDROGENASE 2 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GINCGPD 10
GI+C PD
Sbjct: 124 GISCMPD 130


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GINCGPD 10
GI+C PD
Sbjct: 128 GISCMPD 134


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LQGINCG 8
L G NCG
Sbjct: 21 LPGFNCG 27




133|Sequence|661|670|NCGPDFTPSF

>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 1 NCGPDFT 7
NCGP FT
Sbjct: 141 NCGPRFT 147


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GPDFTPSF 10
G DF+PSF
Sbjct: 506 GYDFSPSF 513


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 3 GPDFTPSF 10
G DF+PSF
Sbjct: 291 GYDFSPSF 298


>sp|FEN_HALSA|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 CGPDFTP 8
CG DF P
Sbjct: 223 CGTDFNP 229


>sp|FEN_HALS3|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 29341

Query: 2 CGPDFTP 8
CG DF P
Sbjct: 223 CGTDFNP 229


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NCGPDFTPSF 10
NCG TPS
Sbjct: 158 NCGKLLTPSL 167


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NCGPDFTPSF 10
NCG TPS
Sbjct: 158 NCGKLLTPSL 167


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 4 PDFTPSF 10
PDF P F
Sbjct: 56 PDFVPRF 62


>sp|DOXA_ACIAM|THIOSULFATE dehydrogenase [quinone] small subunit|Acidianus ambivalens

Query: 2 CGPDFTPS 9
CGPD P+
Sbjct: 67 CGPDAYPA 74


>sp|Y1264_HALSA|UPF0212 protein VNG_1264C|Halobacterium salinarum (strain ATCC 700922

Query: 1 NCGPDFTPSF 10
+CG D P+F
Sbjct: 52 HCGTDTEPAF 61


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 NCGPDFTP 8
N GPD P
Sbjct: 191 NAGPDLEP 198


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PDFTPS 9
P+FTPS
Sbjct: 78 PEFTPS 83


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 1 NCGPDFT 7
NC PD T
Sbjct: 30 NCKPDMT 36


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 DFTPSF 10
DFTP+F
Sbjct: 301 DFTPNF 306


>sp|F16PA_HALSA|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 700922

Query: 4 PDFTPSF 10
PD+TP+F
Sbjct: 174 PDWTPAF 180


>sp|F16PA_HALS3|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 29341

Query: 4 PDFTPSF 10
PD+TP+F
Sbjct: 174 PDWTPAF 180


>sp|TRUA_METPE|TRNA pseudouridine synthase A|Methanosphaerula palustris (strain ATCC

Query: 1 NCGPDFTPS 9
+CG FTP+
Sbjct: 224 DCGVTFTPT 232


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 1 NCGPDFTPSF 10
+CG D P F
Sbjct: 76 SCGSDDEPKF 85




134|Sequence|666|675|FTPSFANLGR

>sp|HEM1_METS5|GLUTAMYL-TRNA reductase|Metallosphaera sedula (strain ATCC 51363

Query: 1 FTPSFANLGR 10
F+P F NL R
Sbjct: 368 FSPMFQNLRR 377


>sp|Y119_PYRAB|UPF0173 protein PYRAB01190|Pyrococcus abyssi (strain GE5 /

Query: 1 FTPSFANL 8
++PSF NL
Sbjct: 129 YSPSFKNL 136


>sp|PYRDB_THEAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma acidophilum

Query: 4 SFANLGR 10
SF NLGR
Sbjct: 106 SFVNLGR 112


>sp|MRE11_PYRHO|DNA double-strand break repair protein|Pyrococcus horikoshii (strain

Query: 1 FTPSFANL 8
FTP F N+
Sbjct: 261 FTPRFVNI 268




135|Sequence|671|680|ANLGRTTLST

>sp|CBIA_METVS|COBYRINATE a,c-diamide synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LGRTTLST 10
+G+TT+ST
Sbjct: 13 VGKTTIST 20


>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 3 LGRTTLST 10
+G+TT+ST
Sbjct: 13 VGKTTIST 20


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 3 LGRTTLST 10
+G+TT+ST
Sbjct: 13 VGKTTIST 20




136|Sequence|676|685|TTLSTRGPPR

>sp|ASPD_METAC|L-ASPARTATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TLSTRGPP 9
TLSTR PP
Sbjct: 143 TLSTRKPP 150


>sp|FLPA_HALLT|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halorubrum lacusprofundi (strain

Query: 1 TTLSTRGPP 9
T L+TRGPP
Sbjct: 19 TRLATRGPP 27


>sp|ASPD_METMA|L-ASPARTATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TLSTRGPP 9
TL+TR PP
Sbjct: 143 TLTTRKPP 150


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TLSTRGPP 9
L+TRGPP
Sbjct: 133 ILNTRGPP 140


>sp|ASPD_METBF|L-ASPARTATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TLSTRGPP 9
TL+TR PP
Sbjct: 143 TLTTRKPP 150




137|Sequence|681|690|RGPPRGGPGG

>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 4 PRGGPG 9
PRGGPG
Sbjct: 96 PRGGPG 101


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 4 PRGGPG 9
PRGGPG
Sbjct: 96 PRGGPG 101


>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain DSM

Query: 4 PRGGPG 9
PRGGPG
Sbjct: 96 PRGGPG 101


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 4 PRGGPG 9
PRGGPG
Sbjct: 96 PRGGPG 101


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 4 PRGGPG 9
PRGGPG
Sbjct: 96 PRGGPG 101


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 4 PRGGPG 9
PRGGPG
Sbjct: 96 PRGGPG 101


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 4 PRGGPG 9
PRGGPG
Sbjct: 96 PRGGPG 101


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 4 PRGGPG 9
P+GGPG
Sbjct: 96 PKGGPG 101


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPPRGGPGG 10
GPP PGG
Sbjct: 13 GPPTEAPGG 21


>sp|RL30_HALMA|LARGE ribosomal subunit protein uL30|Haloarcula marismortui (strain ATCC

Query: 3 PPRGGPGG 10
PPRGG G
Sbjct: 120 PPRGGHDG 127


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 4 PRGGPG 9
PR GPG
Sbjct: 96 PRSGPG 101


>sp|RL30_HALWD|LARGE ribosomal subunit protein uL30|Haloquadratum walsbyi (strain DSM

Query: 3 PPRGGPGG 10
PPRGG G
Sbjct: 120 PPRGGHRG 127


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 PRGGPG 9
P+GGPG
Sbjct: 433 PKGGPG 438


>sp|PFDB_METTP|PREFOLDIN subunit beta|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PPRGG 7
PPRGG
Sbjct: 116 PPRGG 120


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PPRGGP 8
PPRG P
Sbjct: 409 PPRGKP 414


>sp|RL30_SACS2|LARGE ribosomal subunit protein uL30|Saccharolobus solfataricus (strain

Query: 3 PPRGGPGG 10
PPRGG G
Sbjct: 124 PPRGGFKG 131


>sp|PIP_SACS2|PROLINE iminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 GGPGG 10
GGPGG
Sbjct: 46 GGPGG 50


>sp|Y1215_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 5 RGGPG 9
RGGPG
Sbjct: 237 RGGPG 241


>sp|METXA_HALSA|HOMOSERINE O-acetyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPPRGGPGG 10
GPP GPGG
Sbjct: 91 GPPADGPGG 99


>sp|RL30_NATPD|LARGE ribosomal subunit protein uL30|Natronomonas pharaonis (strain ATCC

Query: 3 PPRGGPGG 10
PPRGG G
Sbjct: 120 PPRGGHDG 127


>sp|RL30_HALSA|LARGE ribosomal subunit protein uL30|Halobacterium salinarum (strain ATCC

Query: 3 PPRGGPGG 10
PPRGG G
Sbjct: 120 PPRGGHDG 127


>sp|RL30_HALS3|LARGE ribosomal subunit protein uL30|Halobacterium salinarum (strain ATCC

Query: 3 PPRGGPGG 10
PPRGG G
Sbjct: 120 PPRGGHDG 127


>sp|KCY_STAMF|CYTIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 2 GPPRGG 7
GPP GG
Sbjct: 8 GPPGGG 13


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 4 PRGGPGG 10
P G PGG
Sbjct: 109 PLGNPGG 115


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 PRGGPG 9
P+GGPG
Sbjct: 433 PKGGPG 438


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RGPPRGG 7
RGP +GG
Sbjct: 65 RGPTKGG 71


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 4 PRGGPG 9
P+GGPG
Sbjct: 433 PKGGPG 438


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 RGPPRGG 7
RGP +GG
Sbjct: 65 RGPTKGG 71


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 RGPPRGGPGG 10
R PP G PGG
Sbjct: 307 RTPPYGVPGG 316


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PRGGPG 9
P+GGPG
Sbjct: 433 PKGGPG 438


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 1 RGPPRGG 7
RGP +GG
Sbjct: 65 RGPTKGG 71


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 1 RGPPRGG 7
RGP +GG
Sbjct: 65 RGPTKGG 71


>sp|RL30_PICTO|LARGE ribosomal subunit protein uL30|Picrophilus torridus (strain ATCC

Query: 3 PPRGG 7
PPRGG
Sbjct: 118 PPRGG 122


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 1 RGPPRGG 7
RGP +GG
Sbjct: 65 RGPTKGG 71


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RGPPRGG 7
RGP +GG
Sbjct: 65 RGPTKGG 71


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPPRGGPG 9
PP GG G
Sbjct: 404 APPHGGAG 411


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 4 PRGGPG 9
P+GGPG
Sbjct: 436 PKGGPG 441


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 RGPPRGG 7
RGP +GG
Sbjct: 65 RGPTKGG 71


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PPRGGPG 9
PP GPG
Sbjct: 128 PPASGPG 134


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RGPPRGG 7
RGP +GG
Sbjct: 65 RGPTKGG 71


>sp|TSGBD_HALVD|GLUCOSE ABC transporter permease protein|Haloferax volcanii (strain ATCC

Query: 1 RGPPRGGPG 9
RGP +GG G
Sbjct: 167 RGPMQGGTG 175


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 4 PRGGPG 9
PRGGPG
Sbjct: 434 PRGGPG 439


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PRGGPG 9
PRGGPG
Sbjct: 433 PRGGPG 438


>sp|RL30_DESA1|LARGE ribosomal subunit protein uL30|Desulfurococcus amylolyticus (strain

Query: 3 PPRGGPGG 10
PPRGG G
Sbjct: 128 PPRGGFDG 135




138|Sequence|686|695|GGPGGELPRG

>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 3 PGGELPR 9
P G+LPR
Sbjct: 205 PSGQLPR 211


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 3 PGGELPR 9
P G+LPR
Sbjct: 205 PSGQLPR 211


>sp|RL1_PICTO|LARGE ribosomal subunit protein uL1|Picrophilus torridus (strain ATCC

Query: 2 GPGGELPR 9
GP G++PR
Sbjct: 119 GPRGKIPR 126


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PGGELPR 9
P GE+PR
Sbjct: 747 PTGEIPR 753


>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 2 GPGGELPR 9
GP GEL R
Sbjct: 30 GPKGELTR 37


>sp|RL6_IGNH4|LARGE ribosomal subunit protein uL6|Ignicoccus hospitalis (strain

Query: 2 GPGGELPR 9
GP GEL R
Sbjct: 30 GPKGELER 37


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 4 GGELPRG 10
GGE PRG
Sbjct: 385 GGENPRG 391


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PGGELPR 9
P GE+PR
Sbjct: 1380 PEGEIPR 1386


>sp|Y1038_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 1 GGPGG 5
GGPGG
Sbjct: 242 GGPGG 246


>sp|RL1_THEAC|LARGE ribosomal subunit protein uL1|Thermoplasma acidophilum (strain ATCC

Query: 2 GPGGELPR 9
GP G++PR
Sbjct: 124 GPRGKMPR 131


>sp|PIP_SACS2|PROLINE iminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GGPGG 5
GGPGG
Sbjct: 46 GGPGG 50


>sp|QUEC_PYRFU|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GGELPR 9
GGE+PR
Sbjct: 80 GGEVPR 85


>sp|NIKR_METJA|PUTATIVE nickel-responsive regulator|Methanocaldococcus jannaschii (strain

Query: 3 PGGELP 8
PGG++P
Sbjct: 135 PGGQIP 140


>sp|RL1_THEVO|LARGE ribosomal subunit protein uL1|Thermoplasma volcanium (strain ATCC

Query: 2 GPGGELPR 9
GP G++PR
Sbjct: 124 GPRGKMPR 131


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila

Query: 2 GPGGELPR 9
GP GEL R
Sbjct: 28 GPKGELSR 35


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 3 PGGELPRG 10
PGG +P G
Sbjct: 408 PGGGMPTG 415


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PGGELPR 9
P GE+PR
Sbjct: 374 PTGEIPR 380


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 4 GGELPRG 10
GGE+P G
Sbjct: 404 GGEIPSG 410


>sp|RL6_THEON|LARGE ribosomal subunit protein uL6|Thermococcus onnurineus (strain

Query: 2 GPGGELPR 9
GP GEL R
Sbjct: 30 GPKGELER 37


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 4 GGELPRG 10
GGE+P G
Sbjct: 405 GGEIPAG 411


>sp|RL6_PYRFU|LARGE ribosomal subunit protein uL6|Pyrococcus furiosus (strain ATCC

Query: 2 GPGGELPR 9
GP GEL R
Sbjct: 30 GPKGELER 37


>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans

Query: 1 GGPGGELP 8
GG GELP
Sbjct: 19 GGQPGELP 26


>sp|RL6_THEKO|LARGE ribosomal subunit protein uL6|Thermococcus kodakarensis (strain

Query: 2 GPGGELPR 9
GP GEL R
Sbjct: 30 GPKGELQR 37


>sp|DPS_PYRFU|DNA protection during starvation protein|Pyrococcus furiosus (strain

Query: 4 GGELPRG 10
GGELPR
Sbjct: 78 GGELPRD 84


>sp|SRP54_METTH|SIGNAL recognition particle 54 kDa|Methanothermobacter thermautotrophicus

Query: 1 GGPGGELPR 9
GGP G+L R
Sbjct: 430 GGPMGQLMR 438


>sp|RL6_THEGJ|LARGE ribosomal subunit protein uL6|Thermococcus gammatolerans (strain

Query: 2 GPGGELPR 9
GP GEL R
Sbjct: 30 GPKGELER 37




139|Sequence|691|700|ELPRGPAGLG

>sp|HEM1_PYRAE|GLUTAMYL-TRNA reductase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LPRGPAGLG 10
+ RGPAGLG
Sbjct: 147 ISRGPAGLG 155


>sp|HEM12_PYRAR|GLUTAMYL-TRNA reductase 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LPRGPAGLG 10
+ RGPAGLG
Sbjct: 147 ISRGPAGLG 155


>sp|PYRD_HALSA|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC

Query: 1 ELPRGPAGLG 10
E+PR AGLG
Sbjct: 72 EIPRALAGLG 81


>sp|PYRD_HALS3|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC

Query: 1 ELPRGPAGLG 10
E+PR AGLG
Sbjct: 72 EIPRALAGLG 81


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 1 ELPRGPAGLG 10
E+PRGP G+G
Sbjct: 456 EVPRGP-GIG 464


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 3 PRGPAGLG 10
P GP G+G
Sbjct: 218 PMGPTGIG 225


>sp|HEM1_PYRIL|GLUTAMYL-TRNA reductase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LPRGPAGLG 10
+ RGP GLG
Sbjct: 147 ISRGPRGLG 155


>sp|HEM11_PYRAR|GLUTAMYL-TRNA reductase 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LPRGPAGLG 10
+ RGP GLG
Sbjct: 145 ISRGPRGLG 153


>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LPRGPAGLG 10
+ RGP GLG
Sbjct: 142 ISRGPRGLG 150


>sp|HEM1_PYRNV|GLUTAMYL-TRNA reductase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LPRGPAGLG 10
+ RGP GLG
Sbjct: 147 ISRGPRGLG 155


>sp|HEM12_PYRCJ|GLUTAMYL-TRNA reductase 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LPRGPAGLG 10
+ RGP GLG
Sbjct: 147 ISRGPRGLG 155


>sp|RFCS_METS3|REPLICATION factor C small subunit|Methanobrevibacter smithii (strain ATCC

Query: 5 GPAGLG 10
GPAG+G
Sbjct: 43 GPAGVG 48


>sp|RFCS_METTH|REPLICATION factor C small subunit|Methanothermobacter thermautotrophicus

Query: 5 GPAGLG 10
GPAG+G
Sbjct: 46 GPAGVG 51


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 5 GPAGLG 10
GPAG+G
Sbjct: 55 GPAGVG 60


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 5 GPAGLG 10
GPAG+G
Sbjct: 51 GPAGVG 56


>sp|RFCS_NATPD|REPLICATION factor C small subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 5 GPAGLG 10
GPAG+G
Sbjct: 52 GPAGVG 57


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 5 GPAGLG 10
GPAG+G
Sbjct: 50 GPAGVG 55


>sp|ASORS_PYRFU|ALIPHATIC sulfonate oxidoreductase, polyferredoxin-like subunit|Pyrococcus

Query: 1 ELPRGPAGLG 10
++PR PAG G
Sbjct: 104 KVPRIPAGKG 113


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 5 GPAGLG 10
GPAG+G
Sbjct: 55 GPAGIG 60


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 5 GPAGLG 10
GPAG+G
Sbjct: 50 GPAGVG 55




140|Sequence|696|705|PAGLGPRRSQ

>sp|PGMI_THEVO|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma volcanium

Query: 1 PAGLGPRRS 9
P+GL PR S
Sbjct: 116 PSGLQPRSS 124


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PAGLGPRR 8
PA +GPRR
Sbjct: 13 PAEMGPRR 20


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PAGLGPRR 8
PA +GPRR
Sbjct: 13 PAEMGPRR 20


>sp|GUAAA_METBU|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcoides

Query: 3 GLGPRRS 9
GLGPR S
Sbjct: 117 GLGPRTS 123


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 1 PAGLGPRRSQ 10
P LGP +SQ
Sbjct: 275 PVWLGPLKSQ 284


>sp|GUAAA_METTH|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothermobacter

Query: 3 GLGPRRS 9
GLGPR S
Sbjct: 115 GLGPRMS 121


>sp|SRP54_METTP|SIGNAL recognition particle 54 kDa|Methanothrix thermoacetophila (strain

Query: 1 PAGLGPR 7
PAG+ PR
Sbjct: 66 PAGMNPR 72


>sp|SRP54_METMA|SIGNAL recognition particle 54 kDa|Methanosarcina mazei (strain ATCC

Query: 1 PAGLGPR 7
PAG+ PR
Sbjct: 66 PAGMNPR 72


>sp|SRP54_METBF|SIGNAL recognition particle 54 kDa|Methanosarcina barkeri (strain Fusaro

Query: 1 PAGLGPR 7
PAG+ PR
Sbjct: 66 PAGMNPR 72


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 PAGLGPR 7
PA LGP+
Sbjct: 275 PANLGPK 281


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC

Query: 1 PAGLGPRRSQ 10
P G PRR++
Sbjct: 81 PEGFNPRRAK 90


>sp|SRP54_METAC|SIGNAL recognition particle 54 kDa|Methanosarcina acetivorans (strain

Query: 1 PAGLGPR 7
PAG+ PR
Sbjct: 66 PAGMNPR 72


>sp|TRUA_PYRAR|TRNA pseudouridine synthase A|Pyrobaculum arsenaticum (strain DSM

Query: 1 PAGLGPRRSQ 10
P G PRR++
Sbjct: 81 PEGFNPRRAK 90


>sp|TRUA_PYRNV|TRNA pseudouridine synthase A|Pyrobaculum neutrophilum (strain DSM

Query: 1 PAGLGPRRSQ 10
P G PRR++
Sbjct: 81 PEGFNPRRAR 90


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain

Query: 1 PAGLGPR 7
PAG+ PR
Sbjct: 66 PAGVSPR 72




141|Sequence|701|710|PRRSQQGPRK

>sp|RS9_THESM|SMALL ribosomal subunit protein uS9|Thermococcus sibiricus (strain DSM

Query: 1 PRRSQQGPR 9
P RS +GPR
Sbjct: 127 PNRSTKGPR 135


>sp|RS9_THEKO|SMALL ribosomal subunit protein uS9|Thermococcus kodakarensis (strain

Query: 1 PRRSQQGPR 9
P RS +GPR
Sbjct: 119 PNRSTKGPR 127


>sp|RS9_PYRFU|SMALL ribosomal subunit protein uS9|Pyrococcus furiosus (strain ATCC

Query: 1 PRRSQQGPR 9
P RS +GPR
Sbjct: 119 PNRSTKGPR 127


>sp|RS9_PYRAB|SMALL ribosomal subunit protein uS9|Pyrococcus abyssi (strain GE5 /

Query: 1 PRRSQQGPR 9
P RS +GPR
Sbjct: 119 PNRSTKGPR 127


>sp|RS9_METJA|SMALL ribosomal subunit protein uS9|Methanocaldococcus jannaschii (strain

Query: 1 PRRSQQGPR 9
P RS +GPR
Sbjct: 120 PSRSTKGPR 128


>sp|RS9_PYRHO|SMALL ribosomal subunit protein uS9|Pyrococcus horikoshii (strain ATCC

Query: 1 PRRSQQGPR 9
P RS +GPR
Sbjct: 119 PNRSTKGPR 127


>sp|RS4_STAMF|SMALL ribosomal subunit protein uS4|Staphylothermus marinus (strain

Query: 1 PRRSQQGPR 9
PR+ +GPR
Sbjct: 7 PRKKWEGPR 15




142|Sequence|706|715|QGPRKEPRKI

>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 GPRKEPRKI 10
GP ++PRK+
Sbjct: 42 GPEQDPRKV 50


>sp|AGL12_HALVD|LOW-SALT glycan biosynthesis protein Agl12|Haloferax volcanii (strain ATCC

Query: 2 GPRKEPRKI 10
GPR+ P K+
Sbjct: 178 GPRQHPEKL 186


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GPRKEPRKI 10
GP EPRK+
Sbjct: 37 GPDGEPRKV 45


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GPRKEPRKI 10
GP EPRK+
Sbjct: 37 GPDGEPRKV 45


>sp|NUSA_THECE|PROBABLE transcription termination protein NusA|Thermococcus celer

Query: 2 GPRKEPRKI 10
GPR++PR I
Sbjct: 111 GPREKPRAI 119


>sp|Y697_METVS|MEMO1 family protein Mevan_0697|Methanococcus vannielii (strain ATCC

Query: 1 QGPRKEPRKI 10
+GP+K P K+
Sbjct: 31 RGPKKLPSKL 40


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PRKEPRKI 10
P EPRK+
Sbjct: 139 PEAEPRKV 146


>sp|Y851_PICTO|UPF0179 protein PTO0851|Picrophilus torridus (strain ATCC 700027

Query: 5 KEPRKI 10
KEPRKI
Sbjct: 116 KEPRKI 121


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GPRKEPRKI 10
GP EPR++
Sbjct: 37 GPDGEPRRV 45


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GPRKEPRKI 10
GP EPR++
Sbjct: 37 GPDGEPRRV 45


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GPRKEPRKI 10
GP EPR++
Sbjct: 37 GPDGEPRRV 45




143|Sequence|711|720|EPRKIIATVL

>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EPRKIIAT 8
EPR I+AT
Sbjct: 340 EPRSILAT 347


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 1 EPRKIIATV 9
EPRKI+ ++
Sbjct: 397 EPRKILESI 405


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 1 EPRKIIATV 9
EPRKI+ ++
Sbjct: 394 EPRKILNSI 402




144|Sequence|716|725|IATVLMTEDI

>sp|FOLD1_HALMA|BIFUNCTIONAL protein FolD 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 IATVLMTED 9
+ATVLM+ED
Sbjct: 34 LATVLMSED 42


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 IATVLMTED 9
+ATVLM++D
Sbjct: 34 LATVLMSDD 42


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ATVLMTED 9
+ VLMTED
Sbjct: 323 SNVLMTED 330


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ATVLMTED 9
+ VLMTED
Sbjct: 325 SNVLMTED 332


>sp|FOLD_HALWD|BIFUNCTIONAL protein FolD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IATVLMTED 9
+ATVLM +D
Sbjct: 50 LATVLMNDD 58


>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 1 IATVLMTED 9
I T+L TED
Sbjct: 430 IETILSTED 438


>sp|FOLD_NATPD|BIFUNCTIONAL protein FolD|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IATVLMTED 9
+ATVLM +D
Sbjct: 34 LATVLMGDD 42




145|Sequence|721|730|MTEDIKLNKA

>sp|RL31_METB6|LARGE ribosomal subunit protein eL31|Methanoregula boonei (strain DSM

Query: 2 TEDIKLNK 9
TED+KL+K
Sbjct: 43 TEDVKLDK 50


>sp|TRM5B_PYRAB|TRNA (guanine(37)-N(1))-methyltransferase Trm5b|Pyrococcus abyssi

Query: 1 MTEDIKLNK 9
+ E+IKLNK
Sbjct: 220 LEENIKLNK 228


>sp|RL31_METMJ|LARGE ribosomal subunit protein eL31|Methanoculleus marisnigri (strain

Query: 2 TEDIKLNKA 10
+ED+KL+K+
Sbjct: 43 SEDVKLDKS 51




146|Sequence|726|735|KLNKAEKAWK

>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KLNKAEKAW 9
K+ KAEK W
Sbjct: 553 KIRKAEKEW 561


>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 KLNKAEKAW 9
K+ KAEK W
Sbjct: 554 KIRKAEKEW 562


>sp|SYT_THEKO|THREONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KLNKAEKAW 9
K+ KAEK W
Sbjct: 553 KIRKAEKEW 561


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLNKAEKAWK 10
+L +A+K+W+
Sbjct: 749 ELGEADKSWR 758


>sp|MSRB_METMA|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina mazei (strain

Query: 1 KLNKAEKAWK 10
K+ K+E+ WK
Sbjct: 5 KIEKSEEDWK 14




147|Sequence|731|740|EKAWKPSSKR

>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KAWKPSSKR 10
K WKP ++R
Sbjct: 517 KTWKPPARR 525


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EKAWKPSSK 9
EK WKP+ K
Sbjct: 205 EKDWKPNVK 213


>sp|Y1063_METJA|UNCHARACTERIZED protein MJ1063|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKAWKPSSKR 10
EKAWK + ++
Sbjct: 144 EKAWKNAKEK 153


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 EKAWKP 6
EK WKP
Sbjct: 763 EKNWKP 768


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 3 AWKPSSKR 10
A+KPSS R
Sbjct: 197 AYKPSSPR 204


>sp|MTD_METB6|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoregula

Query: 2 KAWKP 6
KAWKP
Sbjct: 56 KAWKP 60


>sp|KDGK2_HALVD|2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 2 KAWKPSSKR 10
K W PS R
Sbjct: 171 KLWSPSDAR 179




148|Sequence|736|745|PSSKRTAADK

>sp|BACR1_HALWD|BACTERIORHODOPSIN-I walsbyi (strain DSM 16790

Query: 1 PSSKRTAAD 9
PS++ TAAD
Sbjct: 246 PSAQETAAD 254


>sp|BACR1_HALWC|BACTERIORHODOPSIN-I walsbyi (strain DSM 16854

Query: 1 PSSKRTAAD 9
PS++ TAAD
Sbjct: 246 PSAQETAAD 254




149|Sequence|741|750|TAADKDRGEE

>sp|CAS6B_METJA|CRISPR-ASSOCIATED endoribonuclease Cas6 2|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DKDRGE 9
DKDRGE
Sbjct: 124 DKDRGE 129


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 ADKDRGEE 10
ADK+RGE+
Sbjct: 392 ADKNRGEK 399


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AADKDRGEE 10
AA +DRG+E
Sbjct: 366 AAPRDRGKE 374


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AADKDRGEE 10
AA +DRG+E
Sbjct: 366 AAPRDRGKE 374




150|Sequence|746|755|DRGEEDADGS

>sp|DNLI_PYRHO|DNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DRGEEDAD 8
D+G EDAD
Sbjct: 533 DKGPEDAD 540


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DRGEEDAD 8
D+G EDAD
Sbjct: 533 DKGPEDAD 540


>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 1 DRGEEDAD 8
D+G EDAD
Sbjct: 533 DKGPEDAD 540


>sp|DNLI_PYRFU|DNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DRGEEDAD 8
D+G EDAD
Sbjct: 533 DKGPEDAD 540


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DRGEEDADG 9
+R EED DG
Sbjct: 142 ERIEEDVDG 150




151|Sequence|751|760|DADGSKTQDL

>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ADGSKTQDL 10
ADGSK +DL
Sbjct: 42 ADGSKIRDL 50


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ADGSKTQDL 10
A+GSK +DL
Sbjct: 42 ANGSKIKDL 50


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ADGSKTQDL 10
A+GSK +DL
Sbjct: 42 ANGSKIRDL 50


>sp|HIS1_METMA|ATP phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DADGSKTQDL 10
D+D K QDL
Sbjct: 101 DSDFEKAQDL 110




152|Sequence|756|765|KTQDLFRRVR

>sp|KITH_HALSA|THYMIDINE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KTQDLFRRVR 10
KT++L RR+R
Sbjct: 21 KTEELLRRLR 30


>sp|KITH_HALS3|THYMIDINE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 KTQDLFRRVR 10
KT++L RR+R
Sbjct: 21 KTEELLRRLR 30


>sp|KITH_HALWD|THYMIDINE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 KTQDLFRRVR 10
KT++L RR+R
Sbjct: 21 KTEELLRRLR 30


>sp|RACD_THEK8|ASPARTATE racemase|Thermococcus sp. (strain KS-8)

Query: 2 TQDLFRRV 9
T DLFRR+
Sbjct: 17 TADLFRRI 24


>sp|CIMA_METJA|(R)-CITRAMALATE synthase CimA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KTQDLFRRV 9
K+Q+LF+++
Sbjct: 173 KSQELFKKI 181


>sp|CIMA_METTH|PUTATIVE (R)-citramalate synthase CimA|Methanothermobacter

Query: 1 KTQDLFRRVR 10
K ++FRRV+
Sbjct: 337 KLMEIFRRVK 346


>sp|DNLI1_THEPD|DNA ligase 1|Thermofilum pendens (strain DSM 2475

Query: 3 QDLFRRVR 10
Q+L RRVR
Sbjct: 286 QELLRRVR 293




153|Sequence|761|770|FRRVRSILNK

>sp|RSMA_METAC|PROBABLE ribosomal RNA small subunit|Methanosarcina acetivorans (strain

Query: 4 VRSILNK 10
VRSILNK
Sbjct: 2 VRSILNK 8


>sp|PELO_STAMF|PROTEIN pelota homolog|Staphylothermus marinus (strain ATCC 43588

Query: 2 RRVRSILNK 10
RRV SILN+
Sbjct: 307 RRVSSILNE 315


>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 1 FRRVRSILNK 10
F RV S+LN+
Sbjct: 144 FERVWSVLNE 153


>sp|RL13_PICTO|LARGE ribosomal subunit protein uL13|Picrophilus torridus (strain ATCC

Query: 1 FRRVRSILNK 10
F R+ S +NK
Sbjct: 109 FERIESAMNK 118




154|Sequence|766|775|SILNKLTPQM

>sp|EF1B_PYRNV|ELONGATION factor 1-beta|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SILNKLTPQ 9
S++NKL+P+
Sbjct: 26 SVINKLSPK 34


>sp|EF1B_PYRAR|ELONGATION factor 1-beta|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ILNKLTPQ 9
I+NKL+P+
Sbjct: 27 IINKLSPK 34




155|Sequence|771|780|LTPQMFQQLM

>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 2 TPQMFQQLM 10
+PQ+F+QLM
Sbjct: 187 SPQLFKQLM 195


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TPQMFQQLM 10
+PQ+F+QLM
Sbjct: 187 SPQLFKQLM 195


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 TPQMFQQLM 10
+PQ+F+QLM
Sbjct: 187 SPQLFKQLM 195


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 TPQMFQQLM 10
+PQ+F+QL+
Sbjct: 187 SPQLFKQLV 195


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 TPQMFQQLM 10
+PQ+F+Q++
Sbjct: 195 SPQLFKQIL 203


>sp|SYDND_METMA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TPQMFQQLM 10
+PQ+F+Q++
Sbjct: 196 SPQLFKQIL 204


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 186 SPQLYKQMM 194


>sp|SYDND_METAC|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TPQMFQQLM 10
+PQ+F+Q++
Sbjct: 196 SPQLFKQIL 204


>sp|SYDND_METMP|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 196 SPQLYKQMM 204


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 186 SPQLYKQMM 194


>sp|SYDND_METM5|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C5 /

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 196 SPQLYKQMM 204


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 190 SPQLYKQMM 198


>sp|SYDND_METM6|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C6 /

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 196 SPQLYKQMM 204


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 190 SPQLYKQIM 198


>sp|SYDND_METM7|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C7 /

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 196 SPQLYKQMM 204


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 190 SPQLYKQMM 198


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TPQMFQQLM 10
+PQ+F+Q++
Sbjct: 196 SPQLFKQIL 204


>sp|SYDND_META3|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 196 SPQLYKQMM 204


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 190 SPQLYKQIM 198


>sp|SYDND_METVS|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 196 SPQLYKQMM 204


>sp|SYDND_METST|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 197 SPQLYKQMM 205


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 TPQMFQQLM 10
+PQ+++Q+M
Sbjct: 195 SPQLYKQIM 203


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TPQMFQQLM 10
+PQ++++LM
Sbjct: 187 SPQLYKELM 195




156|Sequence|776|785|FQQLMKQVTQ

>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 FQQLMKQVT 9
FQ+L+KQ T
Sbjct: 192 FQELVKQAT 200




157|Sequence|781|790|KQVTQLAIDT

***** No hits found ******


158|Sequence|786|795|LAIDTEERLK

>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AIDTEERLK 10
A+D EERLK
Sbjct: 454 AVDDEERLK 462


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LAIDTEERL 9
+ +DTEERL
Sbjct: 81 IGLDTEERL 89


>sp|BIOW_METIM|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus infernus (strain DSM 11812

Query: 3 IDTEERLK 10
IDT ERLK
Sbjct: 129 IDTSERLK 136


>sp|MNTP_METB6|MANGANESE exporter MntP|Methanoregula boonei (strain DSM 21154

Query: 1 LAIDTEERL 9
LAI T ERL
Sbjct: 22 LAIGTSERL 30


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DTEERLK 10
D+EERLK
Sbjct: 472 DSEERLK 478


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 IDTEERLK 10
+D EERLK
Sbjct: 1 MDVEERLK 8


>sp|RL10_ARCFU|LARGE ribosomal subunit protein uL10|Archaeoglobus fulgidus (strain ATCC

Query: 1 LAIDTEERLK 10
LAIDTE+ L+
Sbjct: 204 LAIDTEKVLE 213


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AIDTEERLK 10
A+D+ ERLK
Sbjct: 771 ALDSYERLK 779




159|Sequence|791|800|EERLKGVIDL

>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 ERLKGVID 9
ER+KG+ID
Sbjct: 590 ERVKGMID 597


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 RLKGVIDL 10
R+KGV+D+
Sbjct: 585 RVKGVVDM 592


>sp|OTC_ARCFU|ORNITHINE carbamoyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EERLKGVI 8
EER KGV+
Sbjct: 27 EERYKGVV 34


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ERLKGVI 8
ERLKGV+
Sbjct: 346 ERLKGVV 352


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 RLKGVID 9
R+KGVID
Sbjct: 573 RVKGVID 579


>sp|RL18_METMJ|LARGE ribosomal subunit protein uL18|Methanoculleus marisnigri (strain

Query: 1 EERLKG 6
EERLKG
Sbjct: 140 EERLKG 145


>sp|DHQS_KORCO|3-DEHYDROQUINATE synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 EERLKGVID 9
+ERLKG +D
Sbjct: 36 KERLKGYLD 44


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 2 ERLKGVIDL 10
ERL G IDL
Sbjct: 289 ERLTGHIDL 297


>sp|IF6_METMP|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain DSM 14266

Query: 2 ERLKGVIDL 10
ER+K V+D+
Sbjct: 36 ERMKNVLDI 44


>sp|IF6_METM7|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C7 /

Query: 2 ERLKGVIDL 10
ER+K V+D+
Sbjct: 36 ERMKNVLDI 44


>sp|IF6_METM6|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C6 /

Query: 2 ERLKGVIDL 10
ER+K V+D+
Sbjct: 36 ERMKNVLDI 44


>sp|IF6_METM5|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C5 /

Query: 2 ERLKGVIDL 10
ER+K V+D+
Sbjct: 36 ERMKNVLDI 44


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EERLKGVID 9
EE++K V+D
Sbjct: 46 EEKMKRVVD 54


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 ERLKGVID 9
+R+KGV+D
Sbjct: 590 DRVKGVLD 597


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EERLKGVID 9
EE+L G++D
Sbjct: 61 EEKLYGILD 69


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EERLKGVID 9
EE+L G++D
Sbjct: 61 EEKLYGILD 69


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EERLKG 6
EERLKG
Sbjct: 185 EERLKG 190




160|Sequence|796|805|GVIDLIFEKA

>sp|MOBA_METAC|PROBABLE molybdenum cofactor guanylyltransferase|Methanosarcina acetivorans

Query: 2 VIDLIFEKA 10
++DL+FEKA
Sbjct: 125 IVDLLFEKA 133


>sp|MOBA_METMA|PROBABLE molybdenum cofactor guanylyltransferase|Methanosarcina mazei

Query: 2 VIDLIFEKA 10
++DL+FEKA
Sbjct: 125 IVDLLFEKA 133


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 3 IDLIFEK 9
IDLIFEK
Sbjct: 71 IDLIFEK 77


>sp|ILVC_METST|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 2 VIDLIFEKA 10
++DLI+EK
Sbjct: 234 IVDLIYEKG 242


>sp|ILVC_SULTO|KETOL-ACID reductoisomerase (NADP(+))|Sulfurisphaera tokodaii (strain DSM

Query: 2 VIDLIFEKA 10
++DLI+EK
Sbjct: 235 IVDLIYEKG 243


>sp|ILVC_METKA|KETOL-ACID reductoisomerase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 2 VIDLIFEKA 10
++DLI+EK
Sbjct: 235 IVDLIYEKG 243


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 1 GVIDLIFEKA 10
GVI++++EK
Sbjct: 338 GVIEILYEKG 347


>sp|ILVC_IGNAA|KETOL-ACID reductoisomerase (NAD(P)(+))|Ignisphaera aggregans (strain DSM

Query: 2 VIDLIFEKA 10
++DLI+EK
Sbjct: 235 IVDLIYEKG 243


>sp|ILVC_SULAC|KETOL-ACID reductoisomerase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 2 VIDLIFEKA 10
++DL++EK
Sbjct: 235 IVDLVYEKG 243


>sp|URED_HALMA|UREASE accessory protein UreD|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVIDLIFEK 9
GV++L FE+
Sbjct: 30 GVLELTFER 38


>sp|RNP4_METLZ|RIBONUCLEASE P protein component 4|Methanocorpusculum labreanum (strain ATCC

Query: 3 IDLIFEKA 10
+D++FE+A
Sbjct: 18 VDILFERA 25


>sp|CFBA_METBU|SIROHYDROCHLORIN cobaltochelatase|Methanococcoides burtonii (strain DSM 6242

Query: 4 DLIFEKA 10
DL+FE+A
Sbjct: 121 DLVFERA 127


>sp|ILVC_METTH|KETOL-ACID reductoisomerase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 2 VIDLIFEKA 10
++DLI+E+
Sbjct: 234 IVDLIYERG 242


>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VIDLIFEKA 10
V+D++F KA
Sbjct: 119 VLDMVFTKA 127


>sp|HEM1_THEAC|GLUTAMYL-TRNA reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VIDLIFEKA 10
V+ LIF+KA
Sbjct: 116 VLSLIFQKA 124


>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 2 VIDLIFEKA 10
++DL++EK
Sbjct: 238 LVDLVYEKG 246


>sp|ILVC_SACI7|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 VIDLIFEKA 10
++DL++EK
Sbjct: 238 LVDLVYEKG 246


>sp|ILVC_SACI6|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.16.4

Query: 2 VIDLIFEKA 10
++DL++EK
Sbjct: 238 LVDLVYEKG 246


>sp|ILVC_SACI4|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 2 VIDLIFEKA 10
++DL++EK
Sbjct: 238 LVDLVYEKG 246


>sp|ILVC_SACI3|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 VIDLIFEKA 10
++DL++EK
Sbjct: 238 LVDLVYEKG 246


>sp|ILVC_SACI2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 VIDLIFEKA 10
++DL++EK
Sbjct: 238 LVDLVYEKG 246


>sp|ILVC_SACI1|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 VIDLIFEKA 10
++DL++EK
Sbjct: 238 LVDLVYEKG 246


>sp|ILVC_METVS|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus vannielii (strain ATCC

Query: 2 VIDLIFEKA 10
++DLI++K
Sbjct: 234 IVDLIYQKG 242


>sp|ILVC_METJA|KETOL-ACID reductoisomerase (NADP(+))|Methanocaldococcus jannaschii (strain

Query: 2 VIDLIFEKA 10
++DLI++K
Sbjct: 235 IVDLIYQKG 243


>sp|ILVC_METMP|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain DSM

Query: 2 VIDLIFEKA 10
++DLI++K
Sbjct: 234 IVDLIYQKG 242


>sp|ILVC_METM7|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 2 VIDLIFEKA 10
++DLI++K
Sbjct: 234 IVDLIYQKG 242


>sp|ILVC_METM5|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C5 /

Query: 2 VIDLIFEKA 10
++DLI++K
Sbjct: 234 IVDLIYQKG 242


>sp|ILVC_METM6|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 2 VIDLIFEKA 10
++DLI++K
Sbjct: 234 IVDLIYQKG 242


>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVIDLIFEKA 10
G ID++F K+
Sbjct: 115 GQIDIVFRKS 124




161|Sequence|801|810|IFEKAISEPN

>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FEKAISEPN 10
FE+ + EPN
Sbjct: 582 FERVLQEPN 590


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 IFEKAISEP 9
+FE ++SEP
Sbjct: 274 VFETSVSEP 282


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 2 FEKAISEPN 10
FE+ +S PN
Sbjct: 391 FERIVSSPN 399


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 FEKAISEP 9
FEKA+ P
Sbjct: 83 FEKAVGSP 90


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 4 KAISEPN 10
KAI EPN
Sbjct: 482 KAIGEPN 488


>sp|HISX_METMA|HISTIDINOL dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FEKAISE 8
FEKA+SE
Sbjct: 71 FEKALSE 77


>sp|Y539_THEKO|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 1 IFEKAISEP 9
IF++A++EP
Sbjct: 177 IFDEALAEP 185


>sp|RL18A_HALMD|LARGE ribosomal subunit protein eL20|Halomicrobium mukohataei (strain

Query: 2 FEKAISEPN 10
FEK + PN
Sbjct: 19 FEKTVEAPN 27




162|Sequence|806|815|ISEPNFSVAY

>sp|MOAA_SULAC|PROBABLE GTP 3',8-cyclase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ISEPNFSVAY 10
I EPNF Y
Sbjct: 298 IREPNFRFRY 307


>sp|NPPNK_METMP|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanococcus maripaludis (strain DSM

Query: 1 ISEPNFSVAY 10
+S PN S AY
Sbjct: 464 VSTPNGSTAY 473


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 1 ISEPNFSVAY 10
+S P F+ AY
Sbjct: 353 VSVPRFAAAY 362


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 1 ISEPNFSV 8
+SEP +SV
Sbjct: 395 VSEPQYSV 402




163|Sequence|811|820|FSVAYANMCR

>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum (strain

Query: 1 FSVAYANMCR 10
F+V + N CR
Sbjct: 162 FTVPFVNGCR 171


>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii (strain

Query: 1 FSVAYANMC 9
F+V+Y +C
Sbjct: 111 FNVSYVGLC 119




164|Sequence|816|825|ANMCRCLMAL

>sp|COBQ_METB6|PROBABLE cobyric acid synthase|Methanoregula boonei (strain DSM 21154

Query: 1 ANMCRCLM 8
A +CRCL+
Sbjct: 19 AAICRCLV 26


>sp|CDC61_THEAC|PUTATIVE ORC1-type DNA replication protein|Thermoplasma acidophilum (strain

Query: 2 NMCRCLMA 9
++CRCL A
Sbjct: 263 SICRCLSA 270


>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 2 NMCRCLMAL 10
++CRC+ AL
Sbjct: 350 SVCRCVEAL 358


>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 2 NMCRCLMAL 10
++CRC+ AL
Sbjct: 350 SVCRCVEAL 358


>sp|MFNA_METMP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 2 NMCRCLMAL 10
++CRC+ AL
Sbjct: 350 SVCRCVDAL 358


>sp|MFNA_META3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus aeolicus (strain

Query: 2 NMCRCLMAL 10
++C+C+ AL
Sbjct: 356 SICKCVKAL 364




165|Sequence|821|830|CLMALKVPTT

>sp|G3P_HALMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 3 MALKVPTT 10
M +KVPTT
Sbjct: 208 MGMKVPTT 215


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 ALKVPTT 10
ALK+PTT
Sbjct: 212 ALKIPTT 218


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 4 ALKVPTT 10
ALK+PTT
Sbjct: 212 ALKIPTT 218


>sp|G3P_METST|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 MALKVPTT 10
MAL VPTT
Sbjct: 210 MALLVPTT 217


>sp|G3P_METS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 MALKVPTT 10
MAL VPTT
Sbjct: 211 MALLVPTT 218


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 3 MALKVPTT 10
MAL VPTT
Sbjct: 211 MALLVPTT 218


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 3 MALKVPTT 10
MAL VPTT
Sbjct: 211 MALLVPTT 218


>sp|G3P_THEVO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 MALKVPTT 10
+A+KVPTT
Sbjct: 208 VAIKVPTT 215


>sp|G3P2_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina barkeri (strain Fusaro /

Query: 4 ALKVPTT 10
A+KVPTT
Sbjct: 212 AIKVPTT 218


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 ALKVPTT 10
A+K+PTT
Sbjct: 212 AMKIPTT 218


>sp|G3P_PICTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 3 MALKVPTT 10
+ALK PTT
Sbjct: 208 VALKAPTT 215




166|Sequence|826|835|KVPTTEKPTV

>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 KVPTTEKP 8
KVP +EKP
Sbjct: 130 KVPHSEKP 137


>sp|RL44E_HALSA|LARGE ribosomal subunit protein eL42|Halobacterium salinarum (strain

Query: 1 KVPTTEKPT 9
KVP KPT
Sbjct: 55 KVPVGNKPT 63


>sp|ENGB_HALSA|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC

Query: 1 KVPTTEKPTV 10
+VPT +KP V
Sbjct: 33 QVPTGQKPGV 42


>sp|ENGB_HALS3|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC

Query: 1 KVPTTEKPTV 10
+VPT +KP V
Sbjct: 33 QVPTGQKPGV 42


>sp|RL44E_HALMA|LARGE ribosomal subunit protein eL42|Haloarcula marismortui (strain

Query: 1 KVPTTEKPT 9
KVP +KPT
Sbjct: 54 KVPGGDKPT 62


>sp|RL44E_NATPD|LARGE ribosomal subunit protein eL42|Natronomonas pharaonis (strain

Query: 1 KVPTTEKPT 9
KVP +KPT
Sbjct: 55 KVPGGDKPT 63


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 3 PTTEKP 8
PTTE+P
Sbjct: 458 PTTEEP 463




167|Sequence|831|840|EKPTVTVNFR

>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EKPTVTVNFR 10
EKP TV FR
Sbjct: 333 EKPNYTVEFR 342


>sp|DTDA_META3|D-AMINOACYL-TRNA deacylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EKPTVTVN 8
EKPT+TV+
Sbjct: 68 EKPTLTVH 75


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EKPTVTVNFR 10
E P+ +NFR
Sbjct: 612 EDPSCKINFR 621


>sp|RL15_PYRAR|LARGE ribosomal subunit protein uL15|Pyrobaculum arsenaticum (strain

Query: 3 PTVTVNFR 10
PT+TV +R
Sbjct: 70 PTITVEWR 77


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 EKPTVTVN 8
+ PTVT+N
Sbjct: 7046 KTPTVTIN 7053


>sp|REG4_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB09690|Pyrococcus abyssi

Query: 1 EKPTVTVNFR 10
+KP TV+FR
Sbjct: 33 KKPESTVHFR 42


>sp|REG4_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF0864|Pyrococcus furiosus

Query: 1 EKPTVTVNFR 10
+KP T++FR
Sbjct: 33 KKPESTIHFR 42


>sp|REG4_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1013|Pyrococcus horikoshii

Query: 1 EKPTVTVNFR 10
+KP TV+FR
Sbjct: 33 KKPESTVHFR 42


>sp|RL44E_ARCFU|LARGE ribosomal subunit protein eL42|Archaeoglobus fulgidus (strain

Query: 1 EKPTVTVNFR 10
+KPT VN R
Sbjct: 59 DKPTKRVNIR 68




168|Sequence|836|845|TVNFRKLLLN

>sp|ASPD_METHJ|L-ASPARTATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 NFRKLLLN 10
NFRK+LL+
Sbjct: 97 NFRKILLD 104


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 4 FRKLLLN 10
FRKLLLN
Sbjct: 185 FRKLLLN 191


>sp|CDC62_SULAC|ORC1-TYPE DNA replication protein 2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 TVNFRKLLLN 10
TV+FR L+LN
Sbjct: 44 TVSFRDLILN 53




169|Sequence|841|850|KLLLNRCQKE

>sp|Y351_METJA|UNCHARACTERIZED protein MJ0351|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLLLNRCQ 8
+LL+NRCQ
Sbjct: 50 RLLVNRCQ 57


>sp|KTHY_METS3|PROBABLE thymidylate kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KLLLNRCQKE 10
K +NRC KE
Sbjct: 126 KTSVNRCSKE 135




170|Sequence|846|855|RCQKEFEKDK

>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KEFEKD 9
KEFEKD
Sbjct: 369 KEFEKD 374


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 5 EFEKDK 10
EFEKDK
Sbjct: 199 EFEKDK 204


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 KEFEKD 9
KEFEKD
Sbjct: 369 KEFEKD 374


>sp|METK_PYRAB|S-ADENOSYLMETHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 KEFEKD 9
KEFEKD
Sbjct: 369 KEFEKD 374


>sp|HCGF_METMP|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 4 KEFEKD 9
KEFEKD
Sbjct: 27 KEFEKD 32


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CQKEFE 7
C+KEFE
Sbjct: 463 CEKEFE 468


>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 3 QKEFEKDK 10
+K+FEK+K
Sbjct: 32 RKQFEKEK 39


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RCQKEFEKDK 10
R +KE EK+K
Sbjct: 206 RLKKELEKEK 215




171|Sequence|851|860|FEKDKDDDEV

>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 1 FEKDKDDDEV 10
FEK KD DEV
Sbjct: 82 FEKIKDKDEV 91


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC

Query: 2 EKDKDDDEV 10
EKD DDE+
Sbjct: 34 EKDMTDDEI 42


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 1 FEKDKDDDEV 10
F KD+D DE+
Sbjct: 72 FPKDRDLDEI 81


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FEKDKDDDEV 10
FEKD+ DDE+
Sbjct: 47 FEKDEMDDEL 56




172|Sequence|856|865|DDDEVFEKKQ

>sp|Y1644_METJA|UNCHARACTERIZED protein MJ1644|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDDEVFEK 8
+DDEVF+K
Sbjct: 50 NDDEVFKK 57


>sp|GCH1_SACS2|GTP cyclohydrolase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DDDEVFEKKQ 10
DD EV+EK Q
Sbjct: 67 DDGEVYEKNQ 76


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 1 DDDEVFEKK 9
D DE FEKK
Sbjct: 95 DSDEYFEKK 103


>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC

Query: 3 DEVFEKKQ 10
D +FE+KQ
Sbjct: 13 DSIFERKQ 20


>sp|RS5_METS3|SMALL ribosomal subunit protein uS5|Methanobrevibacter smithii (strain

Query: 1 DDDEVFEK 8
D DE+FEK
Sbjct: 25 DIDEIFEK 32




173|Sequence|861|870|FEKKQKEMDE

>sp|NQOR_METAC|NAD(P)H dehydrogenase (quinone)|Methanosarcina acetivorans (strain ATCC

Query: 2 EKKQKEMDE 10
EK+Q MDE
Sbjct: 155 EKRQTRMDE 163


>sp|Y933_METJA|UNCHARACTERIZED membrane protein MJ0933|Methanocaldococcus jannaschii (strain

Query: 2 EKKQKEMDE 10
+KK K+MDE
Sbjct: 76 KKKAKKMDE 84


>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EKKQKEMDE 10
E+K KEMD+
Sbjct: 107 EEKHKEMDK 115


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FEKKQKEMDE 10
FEK +E+DE
Sbjct: 481 FEKLSRELDE 490


>sp|PSTB_PYRFU|PHOSPHATE import ATP-binding protein PstB|Pyrococcus furiosus (strain ATCC

Query: 3 KKQKEMDE 10
K QKE+DE
Sbjct: 117 KSQKELDE 124


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 EKKQKEMDE 10
E+K KE D+
Sbjct: 107 ERKHKEQDQ 115




174|Sequence|866|875|KEMDEAATAE

***** No hits found ******


175|Sequence|871|880|AATAEERGRL

>sp|RPO1C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 2 ATAEERG 8
ATAEERG
Sbjct: 29 ATAEERG 35


>sp|RPO1C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 2 ATAEERG 8
ATAEERG
Sbjct: 29 ATAEERG 35


>sp|IF2B_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 1 AATAEERGRL 10
+A +ERGRL
Sbjct: 68 SANIDERGRL 77




176|Sequence|876|885|ERGRLKEELE

>sp|IDI2_PYRNV|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GRLKEELE 10
GRLKEE+E
Sbjct: 304 GRLKEEIE 311


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ERGRLKEELE 10
E GRLK+ELE
Sbjct: 203 EIGRLKKELE 212


>sp|Y79B_METJA|UNCHARACTERIZED protein MJ0795.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERGRLKEELE 10
++GRLK+E++
Sbjct: 59 DKGRLKKEVK 68


>sp|AATD_METKA|A-TYPE ATP synthase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 1 ERGRLKEELE 10
ER +LKEELE
Sbjct: 210 ERKKLKEELE 219


>sp|IDI2_PYRAR|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GRLKEELE 10
GRL+EE+E
Sbjct: 302 GRLREEIE 309


>sp|CPGS_PYRAB|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 RGRLKEEL 9
RGRL+EE+
Sbjct: 357 RGRLREEM 364


>sp|THIM_ARCFU|HYDROXYETHYLTHIAZOLE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RLKEELE 10
RLKEELE
Sbjct: 5 RLKEELE 11


>sp|IDI2_PYRIL|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GRLKEELE 10
GRL+EE+E
Sbjct: 304 GRLREEIE 311


>sp|RS2_NITMS|SMALL ribosomal subunit protein uS2|Nitrosopumilus maritimus (strain

Query: 1 ERGRLKEE 8
E+G LKEE
Sbjct: 180 EKGELKEE 187


>sp|DMRX_METJA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanocaldococcus jannaschii (strain ATCC

Query: 4 RLKEELE 10
RLKEE+E
Sbjct: 31 RLKEEIE 37


>sp|OGG1_SACS2|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus solfataricus (strain ATCC

Query: 3 GRLKEELE 10
GRLKEE++
Sbjct: 98 GRLKEEIK 105


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RGRLKEELE 10
RG++ EELE
Sbjct: 131 RGKIYEELE 139


>sp|CDC68_HALSA|ORC1-TYPE DNA replication protein 8|Halobacterium salinarum (strain ATCC

Query: 1 ERGRLKEELE 10
ERGR+K+ ++
Sbjct: 287 ERGRIKDSIK 296


>sp|Y1567_METJA|UNCHARACTERIZED protein MJ1567|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERGRLKE 7
E GRLKE
Sbjct: 124 ENGRLKE 130




177|Sequence|881|890|KEELEEARDI

>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 KEELEEARDI 10
KEELE+AR+I
Sbjct: 156 KEELEKAREI 165


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 2 EELEEARDI 10
EEL+E RDI
Sbjct: 453 EELDELRDI 461


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EELEEARD 9
E LEEARD
Sbjct: 414 ESLEEARD 421


>sp|COBD_METTH|PROBABLE cobalamin biosynthesis protein CobD|Methanothermobacter

Query: 1 KEELEEAR 8
KE++E+AR
Sbjct: 103 KEDIEDAR 110


>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 4 LEEARDI 10
L+EARDI
Sbjct: 129 LQEARDI 135


>sp|HMGCS_METS3|HYDROXYMETHYLGLUTARYL-COA synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EELEEARDI 10
EE++E RD+
Sbjct: 309 EEIKEKRDL 317


>sp|GCH3_METM6|GTP cyclohydrolase III|Methanococcus maripaludis (strain C6 /

Query: 1 KEELEEARDI 10
K+E+EE +D+
Sbjct: 249 KQEIEERKDV 258




178|Sequence|886|895|EARDIARRRS

>sp|Y1775_ARCFU|PUTATIVE aminohydrolase AF_1775|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EARDIARRR 9
E R+IARRR
Sbjct: 166 EVREIARRR 174


>sp|SUCC_METTH|SUCCINATE--COA ligase [ADP-forming] subunit beta|Methanothermobacter

Query: 1 EARDIARR 8
EAR+IAR+
Sbjct: 150 EAREIARK 157




179|Sequence|891|900|ARRRSLGNIK

>sp|NADE_THEKO|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RRSLGNI 9
+RSLGNI
Sbjct: 104 KRSLGNI 110


>sp|NADE_PYRFU|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RRSLGNI 9
R+SLGNI
Sbjct: 100 RKSLGNI 106


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 4 RSLGNIK 10
RS+GN+K
Sbjct: 58 RSMGNVK 64




180|Sequence|896|905|LGNIKFIGEL

>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LGNIKFIGEL 10
L NIKF+GE+
Sbjct: 466 LFNIKFVGEI 475


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGNIKFIGEL 10
+G+I+FIGE+
Sbjct: 819 IGSIEFIGEV 828


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGNIKFIGEL 10
+G I+FIGE+
Sbjct: 819 VGEIEFIGEI 828


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LGNIKFIG 8
+GN++FIG
Sbjct: 821 VGNVEFIG 828


>sp|RS4E_PYRCJ|SMALL ribosomal subunit protein eS4|Pyrobaculum calidifontis (strain DSM

Query: 2 GNIKFIGEL 10
GNI F+G+
Sbjct: 186 GNIGFVGQF 194


>sp|RS3_THEAC|SMALL ribosomal subunit protein uS3|Thermoplasma acidophilum (strain ATCC

Query: 2 GNIKFIGE 9
GN+K+ GE
Sbjct: 148 GNVKYSGE 155


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 GNIKFIGE 9
GN+K GE
Sbjct: 368 GNVKIFGE 375


>sp|RS3_THEVO|SMALL ribosomal subunit protein uS3|Thermoplasma volcanium (strain ATCC

Query: 2 GNIKFIGE 9
GN+K+ GE
Sbjct: 148 GNVKYSGE 155


>sp|GLPK_PYRAB|GLYCEROL kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 GNIKFIGE 9
GNIK IG+
Sbjct: 24 GNIKGIGQ 31




181|Sequence|901|910|FIGELFKLKM

>sp|RL15E_NANEQ|LARGE ribosomal subunit protein eL15|Nanoarchaeum equitans (strain

Query: 1 FIGELFKLKM 10
F+GEL+K ++
Sbjct: 17 FLGELYKQRI 26


>sp|AATB_METLZ|A-TYPE ATP synthase subunit B|Methanocorpusculum labreanum (strain ATCC

Query: 1 FIGELFKL 8
F+GE FK+
Sbjct: 70 FLGETFKM 77


>sp|PYRK_PYRFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus furiosus

Query: 1 FIGELFKLK 9
F ELFKLK
Sbjct: 62 FTNELFKLK 70


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 1 FIGELFKLKM 10
IGELFK+ +
Sbjct: 138 LIGELFKIDV 147


>sp|Y1254_IGNH4|UPF0173 metal-dependent hydrolase Igni_1254|Ignicoccus hospitalis (strain

Query: 1 FIGELFKLKM 10
FIGEL+ K+
Sbjct: 153 FIGELYAPKV 162


>sp|IF6_SULAC|TRANSLATION initiation factor 6|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IGELFKLKM 10
+ ELFK+K+
Sbjct: 172 LSELFKVKL 180




182|Sequence|906|915|FKLKMLTEAI

>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 KLKMLTEAI 10
KLKM+TE++
Sbjct: 387 KLKMITESV 395


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 2 KLKMLTEAI 10
KL+M+TE++
Sbjct: 385 KLRMITESV 393




183|Sequence|911|920|LTEAIMHDCV

>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LTEAIMHDCV 10
LT IM++CV
Sbjct: 291 LTSGIMYECV 300


>sp|MDH_HALMA|MALATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LTEAIMHD 8
+ EAI+HD
Sbjct: 233 MVEAILHD 240


>sp|AOCD_METMP|ORNITHINE cyclodeaminase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LTEAIMHDCV 10
L E IM+ C+
Sbjct: 296 LKEGIMYQCI 305


>sp|GVPL_HALMT|GAS vesicle protein L|Haloferax mediterranei (strain ATCC 33500

Query: 4 AIMHDC 9
A++HDC
Sbjct: 103 AVVHDC 108


>sp|GVPL1_HALSA|GAS vesicle protein L1|Halobacterium salinarum (strain ATCC 700922

Query: 4 AIMHDC 9
A++HDC
Sbjct: 61 AVVHDC 66


>sp|MDH_HALVD|MALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 LTEAIMHD 8
+ EA++HD
Sbjct: 233 MVEAVLHD 240


>sp|GVPL2_HALSA|GAS vesicle protein L2|Halobacterium salinarum (strain ATCC 700922

Query: 4 AIMHDC 9
A++HDC
Sbjct: 53 AVVHDC 58


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 LTEAIMHDCV 10
L + IM++C+
Sbjct: 292 LKDGIMYECI 301




184|Sequence|916|925|MHDCVVKLLK

>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 MHDCVVKLLK 10
MH+ +VKLLK
Sbjct: 87 MHEIIVKLLK 96


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 DCVVKLLK 10
+CVV++LK
Sbjct: 439 ECVVRILK 446


>sp|IDI2_NATPD|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 HDCVV 6
HDCVV
Sbjct: 269 HDCVV 273


>sp|RNZ_METTH|RIBONUCLEASE Z|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 MHDCVVKL 8
+H+C++K+
Sbjct: 97 LHECIMKM 104


>sp|IDI2_HALSA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 2 HDCVV 6
HDCV+
Sbjct: 269 HDCVI 273


>sp|KAE1_PYRIL|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum islandicum

Query: 2 HDCVVKLL 9
HD VVK++
Sbjct: 272 HDAVVKIV 279




185|Sequence|921|930|VKLLKNHDEE

>sp|RUVB_METHJ|HOLLIDAY junction branch migration complex|Methanospirillum hungatei JF-1

Query: 6 NHDEE 10
NHDEE
Sbjct: 10 NHDEE 14


>sp|PURP_PYRAE|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum aerophilum (strain ATCC

Query: 2 KLLKNHDEE 10
+LLKN+D E
Sbjct: 9 QLLKNYDLE 17


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VKLLKNHDEE 10
V +L+NH EE
Sbjct: 415 VAILENHQEE 424


>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKLLKNHDEE 10
VKLLK H E
Sbjct: 251 VKLLKKHGRE 260


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKLLKNHDEE 10
V +L+NH EE
Sbjct: 415 VAILENHQEE 424


>sp|KADA_METTH|ADENYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VKLLKNHDEE 10
VK++KNH+ +
Sbjct: 163 VKIVKNHNNQ 172


>sp|RLME_METVS|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus vannielii (strain

Query: 1 VKLLKNHDE 9
VKLLK DE
Sbjct: 217 VKLLKPQDE 225


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 VKLLKNHD 8
VK+ KNHD
Sbjct: 127 VKIKKNHD 134


>sp|Y602_METJA|UNCHARACTERIZED protein MJ0602|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLKNHDEE 10
+LKN DEE
Sbjct: 225 ILKNFDEE 232


>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain ATCC

Query: 3 LLKNHDEE 10
LL NHD+E
Sbjct: 617 LLFNHDDE 624


>sp|TBP_PYRIL|TATA-BOX-BINDING protein|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VKLLKNHDEE 10
VKLL++H E
Sbjct: 83 VKLLRDHGAE 92


>sp|TBP_PYRNV|TATA-BOX-BINDING protein|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VKLLKNH 7
VKLLK+H
Sbjct: 83 VKLLKDH 89


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 1 VKLLKNHDEE 10
K+LK DEE
Sbjct: 153 AKMLKEQDEE 162


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLKNHDEE 10
L+KN DEE
Sbjct: 819 LIKNADEE 826


>sp|TBP_PYRAE|TATA-BOX-BINDING protein|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VKLLKNH 7
VKLLK+H
Sbjct: 83 VKLLKDH 89


>sp|CYDE_METJA|L-CYSTEINE desulfidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LKNHDEE 10
+K HDEE
Sbjct: 249 IKGHDEE 255




186|Sequence|926|935|NHDEESLECL

>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HDEESLEC 9
H EE LEC
Sbjct: 459 HGEEILEC 466


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 2 HDEESLECL 10
HD+ LEC+
Sbjct: 219 HDDGKLECV 227


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HDEESLECL 10
+DE+S++CL
Sbjct: 1147 YDEKSIDCL 1155


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 4 EESLECL 10
EE++ECL
Sbjct: 31 EEAVECL 37




187|Sequence|931|940|SLECLCRLLT

>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 2 LECLCRLLT 10
+ C C+LLT
Sbjct: 498 IPCYCKLLT 506


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LECLCRLL 9
LECL RLL
Sbjct: 308 LECLERLL 315


>sp|H669_METJA|PROBABLE ATP-dependent RNA helicase MJ0669|Methanocaldococcus jannaschii

Query: 2 LECLCRLL 9
E LCRLL
Sbjct: 227 FEALCRLL 234


>sp|SERC_METMA|PHOSPHOSERINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LECLC 6
LECLC
Sbjct: 355 LECLC 359


>sp|SERC_METAC|PHOSPHOSERINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LECLC 6
LECLC
Sbjct: 355 LECLC 359


>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 4 CLCRLLT 10
CLC L T
Sbjct: 208 CLCNLAT 214




188|Sequence|936|945|CRLLTTIGKD

>sp|Y1566_METJA|UNCHARACTERIZED protein MJ1566|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RLLTTIGKD 10
RLLTTI +D
Sbjct: 347 RLLTTISED 355


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CRLLTTIGKD 10
C+LL GKD
Sbjct: 469 CKLLKKSGKD 478


>sp|YHIT_SACS2|UNCHARACTERIZED HIT-like protein SSO2163|Saccharolobus solfataricus (strain ATCC

Query: 2 RLLTTIGK 9
R+LT IGK
Sbjct: 80 RILTNIGK 87


>sp|Y2657_METHJ|UPF0210 protein Mhun_2657|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 RLLTTIGKD 10
RL+ IGKD
Sbjct: 403 RLIPVIGKD 411


>sp|Y1030_METLZ|UPF0210 protein Mlab_1030|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 RLLTTIGKD 10
RL+ IGKD
Sbjct: 403 RLIPVIGKD 411


>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RLLTTIGKD 10
RL+ IGKD
Sbjct: 403 RLIPVIGKD 411




189|Sequence|941|950|TIGKDLDFEK

>sp|Y1020_METJA|UNCHARACTERIZED protein MJ1020|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGKDLDFEK 10
+G+D+DFE+
Sbjct: 1 MGRDMDFEE 9


>sp|ACDD_METKA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanopyrus kandleri

Query: 1 TIGKDLDFEK 10
+I +D+DFE+
Sbjct: 233 SINEDMDFER 242


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 2 IGKDLDFE 9
IGKDLD++
Sbjct: 79 IGKDLDYK 86


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IGKDLDFE 9
IG DLD E
Sbjct: 1021 IGNDLDLE 1028


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GKDLDFEK 10
KDL+FEK
Sbjct: 628 AKDLNFEK 635


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TIGKDLDF 8
TIGKD+ F
Sbjct: 559 TIGKDVPF 566


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TIGKDLDFEK 10
T+ +D+DF+K
Sbjct: 347 TLAEDIDFKK 356


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 4 KDLDFEK 10
KDLDF K
Sbjct: 2 KDLDFSK 8


>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 3 GKDLDFEK 10
G DLDF++
Sbjct: 158 GNDLDFQE 165


>sp|Y853_THEKO|UPF0284 protein TK0853|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TIGKDLDFEK 10
T DLDF K
Sbjct: 272 TYAADLDFSK 281


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 GKDLDFEK 10
G DL FEK
Sbjct: 287 GSDLGFEK 294


>sp|ENO_PYRFU|ENOLASE furiosus (strain ATCC 43587

Query: 3 GKDLDFEK 10
G DLDF++
Sbjct: 158 GNDLDFQE 165


>sp|Y1150_METTH|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 3 GKDLDFEK 10
G+D+D EK
Sbjct: 20 GEDIDLEK 27


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 TIGKDLDFE 9
T+ KD+ FE
Sbjct: 408 TVSKDMSFE 416


>sp|Y727_METJA|UNCHARACTERIZED protein MJ0727|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGKDLDF 8
+GKD+DF
Sbjct: 11 MGKDIDF 17


>sp|TRM5B_METJA|TRNA (guanine(37)-N(1))-methyltransferase Trm5b|Methanocaldococcus

Query: 1 TIGKDLD 7
TIGKD D
Sbjct: 291 TIGKDFD 297


>sp|Y688_THEON|UPF0284 protein TON_0688|Thermococcus onnurineus (strain NA1)

Query: 1 TIGKDLDFEK 10
T DLDF K
Sbjct: 272 TYAADLDFSK 281


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IGKDLDFEK 10
IGKD D K
Sbjct: 479 IGKDFDITK 487


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KDLDFEK 10
KD D+EK
Sbjct: 601 KDFDYEK 607


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 KDLDFEK 10
KD D+EK
Sbjct: 601 KDFDYEK 607




190|Sequence|946|955|LDFEKAKPRM

>sp|NADE_METAC|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDFEKAKPRM 10
+DFEKA+ R+
Sbjct: 1 MDFEKAQNRI 10


>sp|CDPAS_METST|CDP-ARCHAEOL synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LDFEKAKP 8
L+FE+ KP
Sbjct: 124 LNFERGKP 131


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 LDFEKAKP 8
DFEK KP
Sbjct: 145 FDFEKVKP 152


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 LDFEKAKPRM 10
++FE+ PRM
Sbjct: 267 INFEEISPRM 276


>sp|GGR2_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DFEKAKPR 9
DFE+ PR
Sbjct: 365 DFEEVNPR 372


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 DFEKAK 7
DFEKAK
Sbjct: 92 DFEKAK 97


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 2 DFEKAKPRM 10
DF+ A+P M
Sbjct: 613 DFDSAEPEM 621


>sp|Y856_PYRHO|UNCHARACTERIZED protein PH0856|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FEKAKPRM 10
FEK KP +
Sbjct: 141 FEKGKPNL 148


>sp|COABC_THEKO|COENZYME A biosynthesis bifunctional protein|Thermococcus kodakarensis

Query: 2 DFEKAKPRM 10
DF K PRM
Sbjct: 378 DFAKKLPRM 386


>sp|RL10E_METST|LARGE ribosomal subunit protein uL16|Methanosphaera stadtmanae (strain

Query: 2 DFEKAK 7
DFEKAK
Sbjct: 129 DFEKAK 134


>sp|Y574_METTH|UNCHARACTERIZED protein MTH_574|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DFEKAKPRM 10
D EKA P M
Sbjct: 160 DIEKANPLM 168


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 2 DFEKAKPRM 10
DF KAK R+
Sbjct: 491 DFAKAKRRL 499


>sp|Y1211_METJA|UNCHARACTERIZED protein MJ1211|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDFEKAKPR 9
+DF+KAK +
Sbjct: 61 IDFDKAKEK 69


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDFEKAKP 8
DF+K KP
Sbjct: 145 FDFDKVKP 152




191|Sequence|951|960|AKPRMDQYFN

>sp|AMT1_METJA|AMMONIUM transporter Amt1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PRMDQYFN 10
PR+D+Y N
Sbjct: 174 PRIDKYIN 181


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1

Query: 3 PRMDQYFN 10
PRM +Y++
Sbjct: 6 PRMQEYYD 13




192|Sequence|956|965|DQYFNQMEKI

>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 QYFNQMEK 9
+YFN MEK
Sbjct: 138 EYFNAMEK 145


>sp|Y3501_METJA|UNCHARACTERIZED protein MJECL01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DQYFNQMEKI 10
++YFN +EKI
Sbjct: 157 EEYFNNIEKI 166


>sp|QUEC_PICTO|7-CYANO-7-DEAZAGUANINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 QYFNQMEK 9
+YFN+ME+
Sbjct: 136 EYFNKMEE 143


>sp|QUEE_METJA|7-CARBOXY-7-DEAZAGUANINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YFNQMEKI 10
YFN++EKI
Sbjct: 42 YFNRVEKI 49


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 QYFNQMEKI 10
+YF+++EKI
Sbjct: 8 EYFDKLEKI 16


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 QYFNQMEKI 10
+YF+++EKI
Sbjct: 8 EYFDKLEKI 16


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 QYFNQMEKI 10
+YF+++EKI
Sbjct: 8 EYFDKLEKI 16


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 QYFNQMEKI 10
+YF+++EKI
Sbjct: 8 EYFDKLEKI 16


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 QYFNQMEKI 10
+YF+++EKI
Sbjct: 8 EYFDKLEKI 16


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 QYFNQMEKI 10
+YF+++EKI
Sbjct: 8 EYFDKLEKI 16


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 QYFNQMEKI 10
+YF+++EKI
Sbjct: 8 EYFDKLEKI 16


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QYFNQMEKI 10
+YF+++EKI
Sbjct: 8 EYFDKLEKI 16


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 QYFNQMEKI 10
+YF+++EKI
Sbjct: 8 EYFDRLEKI 16


>sp|PYRDB_METJA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocaldococcus jannaschii

Query: 1 DQYFNQMEKI 10
D+Y ++EK+
Sbjct: 81 DEYLEEIEKV 90


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QYFNQMEKI 10
+YF+++EKI
Sbjct: 8 EYFDKLEKI 16


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 QYFNQMEKI 10
+YF+++EKI
Sbjct: 8 EYFDRLEKI 16


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QYFNQMEKI 10
+YF+++EKI
Sbjct: 8 EYFDRLEKI 16


>sp|Y1345_METJA|TPR repeat-containing protein MJ1345|Methanocaldococcus jannaschii

Query: 1 DQYFNQMEK 9
D+YF+ +EK
Sbjct: 17 DEYFDALEK 25




193|Sequence|961|970|QMEKIIKEKK

>sp|GGGPS_PYRAR|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QMEKIIKEKK 10
QMEK++K+ K
Sbjct: 52 QMEKVVKDIK 61


>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 1 QMEKIIKEKK 10
+MEK++KEKK
Sbjct: 378 RMEKVLKEKK 387


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 1 QMEKIIKEKK 10
QMEK + EKK
Sbjct: 28 QMEKYLSEKK 37


>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 QMEKIIKEKK 10
+MEK+++EKK
Sbjct: 378 RMEKVLREKK 387


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QMEKIIKEKK 10
Q E+I+KEKK
Sbjct: 166 QGEEIVKEKK 175


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QMEKIIKE 8
MEKIIKE
Sbjct: 70 DMEKIIKE 77


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QMEKIIKE 8
++EKI+KE
Sbjct: 290 ELEKILKE 297


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QMEKIIKE 8
++EKI+KE
Sbjct: 290 ELEKILKE 297




194|Sequence|966|975|IKEKKTSSRI

***** No hits found ******


195|Sequence|971|980|TSSRIRFMLQ

>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TSSRIRFMLQ 10
+ SRIRFM Q
Sbjct: 244 SQSRIRFMSQ 253


>sp|ASPG_PYRFU|L-ASPARAGINASE furiosus (strain ATCC 43587

Query: 1 TSSRIRFMLQ 10
TSS I FML+
Sbjct: 89 TSSMISFMLR 98




196|Sequence|976|985|RFMLQDVLDL

>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 1 RFMLQD 6
RFMLQD
Sbjct: 480 RFMLQD 485


>sp|COFC_HALLT|2-PHOSPHO-L-LACTATE guanylyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RFMLQDVL 8
R MLQDVL
Sbjct: 30 RTMLQDVL 37


>sp|RS4_METTH|SMALL ribosomal subunit protein uS4|Methanothermobacter

Query: 4 LQDVLDL 10
L+DVLDL
Sbjct: 89 LEDVLDL 95


>sp|ACDE1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Archaeoglobus

Query: 3 MLQDVLD 9
MLQ+VLD
Sbjct: 176 MLQEVLD 182


>sp|RFRNP_METMP|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain DSM 14266

Query: 2 FMLQDVLDL 10
F+LQ+ LDL
Sbjct: 211 FILQEYLDL 219


>sp|RFRNP_METM6|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C6 /

Query: 2 FMLQDVLDL 10
F+LQ+ LDL
Sbjct: 211 FILQEYLDL 219




197|Sequence|981|990|DVLDLRGSNW

>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 5 LRGSNW 10
+RGSNW
Sbjct: 243 IRGSNW 248


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 3 LDLRGSNW 10
LDLR NW
Sbjct: 33 LDLRRFNW 40


>sp|CSA1_SACS2|CRISPR-ASSOCIATED exonuclease Csa1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 DLRGSNW 10
+LRG NW
Sbjct: 25 ELRGWNW 31


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DVLDLRGS 8
D+LDLR S
Sbjct: 302 DLLDLRAS 309


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DVLDLRGS 8
D+LDLR S
Sbjct: 302 DLLDLRAS 309


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 5 LRGSNW 10
L+G+NW
Sbjct: 337 LKGANW 342


>sp|THSB_SULAC|CHAPERONIN subunit beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VLDLRGSNW 10
V +LRG W
Sbjct: 192 VAELRGDKW 200


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 2 VLDLRGSNW 10
V +LRG W
Sbjct: 191 VAELRGDKW 199


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VLDLRGSNW 10
V +LRG W
Sbjct: 191 VAELRGDKW 199


>sp|DHQS_METST|3-DEHYDROQUINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DVLDLRGSNW 10
D + L+G NW
Sbjct: 103 DYVILKGKNW 112


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DVLDLRG 7
D+LD+RG
Sbjct: 651 DLLDIRG 657


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VLDLRGSNW 10
V +LRG W
Sbjct: 192 VAELRGDRW 200


>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 1 DVLDLRGSNW 10
+ LD+ SNW
Sbjct: 107 NYLDVSASNW 116


>sp|RRP4_METBU|EXOSOME complex component Rrp4|Methanococcoides burtonii (strain DSM 6242

Query: 1 DVLDLRGSNW 10
+V+D+ SNW
Sbjct: 64 NVIDVTPSNW 73


>sp|SURE_METKA|5'-NUCLEOTIDASE SurE|Methanopyrus kandleri (strain AV19 /

Query: 5 LRGSNW 10
+RG+NW
Sbjct: 159 IRGANW 164


>sp|NADM_PICTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 5 LRGSNW 10
+RG NW
Sbjct: 135 IRGENW 140




198|Sequence|986|995|RGSNWVPRRG

>sp|EI2BL_PYRAB|PUTATIVE translation initiation factor eIF-2B|Pyrococcus abyssi (strain

Query: 1 RGSNWVPRRG 10
RG+ W+ R+G
Sbjct: 19 RGATWLARKG 28


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 RGSNWV 6
RGSNWV
Sbjct: 244 RGSNWV 249


>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RGSNWVPRR 9
RG NW+ R+
Sbjct: 414 RGKNWLKRK 422


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 RGSNWVPRR 9
RG NW+ R+
Sbjct: 444 RGKNWLKRK 452


>sp|EI2BL_PYRFU|PUTATIVE translation initiation factor eIF-2B|Pyrococcus furiosus (strain

Query: 1 RGSNWVPRRG 10
RG++W+ ++G
Sbjct: 19 RGASWMAKKG 28


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 4 NWVPRRG 10
NWV +RG
Sbjct: 10 NWVKKRG 16


>sp|DNLI_METBU|DNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 RGSNWVPRR 9
RG NW+ ++
Sbjct: 427 RGKNWLKKK 435


>sp|DNLI2_METMA|DNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RGSNWVPRR 9
RG NW+ ++
Sbjct: 425 RGKNWLKKK 433


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 RGSNWVPRR 9
RG NW+ ++
Sbjct: 425 RGKNWLKKK 433


>sp|UPPP_SACI6|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain M.16.4 /

Query: 4 NWVPRRG 10
N++PR+G
Sbjct: 137 NYIPRKG 143


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RGSNWVPRR 9
RG NW+ ++
Sbjct: 425 RGKNWLKKK 433


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RGSNWVP 7
RGS+W P
Sbjct: 270 RGSHWGP 276


>sp|COBD_METTP|PROBABLE cobalamin biosynthesis protein CobD|Methanothrix thermoacetophila

Query: 4 NWVPRR 9
NW+P R
Sbjct: 217 NWIPAR 222


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RGSNWVPRR 9
RG +W+ R+
Sbjct: 421 RGKDWLKRK 429


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RGSNWVPRR 9
RG +W+ R+
Sbjct: 421 RGKDWLKRK 429


>sp|COFD_METMP|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain DSM 14266

Query: 5 WVPRRG 10
WV RRG
Sbjct: 157 WVSRRG 162


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 RGSNWV 6
RG NW+
Sbjct: 405 RGKNWI 410


>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GSNWVPRRG 10
G WV R G
Sbjct: 258 GERWVSREG 266


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RGSNWVPR 8
R NW PR
Sbjct: 177 RNVNWCPR 184


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RGSNWVPR 8
R NW PR
Sbjct: 177 RSVNWCPR 184


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RGS---NWVPRRG 10
RGS NW PR G
Sbjct: 173 RGSRVVNWCPRCG 185


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RGSNWVPR 8
R NW PR
Sbjct: 177 RSVNWCPR 184


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RGSNWVPR 8
R NW PR
Sbjct: 177 RSVNWCPR 184


>sp|IF1A_METTH|TRANSLATION initiation factor 1A|Methanothermobacter thermautotrophicus

Query: 3 SNWVPRRG 10
SNW+ R+G
Sbjct: 88 SNWLERKG 95




199|Sequence|991|1000|VPRRGDQGPK

>sp|RDFA_HALVD|ROD-DETERMINING factor A|Haloferax volcanii (strain ATCC 29605

Query: 1 VPRRGDQGPK 10
V RRG +GPK
Sbjct: 8 VSRRGGRGPK 17


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 GDQGP 9
GDQGP
Sbjct: 221 GDQGP 225




200|Sequence|996|1005|DQGPKTIDQI

>sp|EPDA_METMP|MINOR structural pilin EpdA|Methanococcus maripaludis (strain DSM 14266

Query: 1 DQGPKTIDQI 10
D+G +T+D+I
Sbjct: 38 DEGTRTLDKI 47


>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 1 DQGPKTID 8
D+ PKT+D
Sbjct: 320 DKAPKTLD 327


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DQGPKTIDQI 10
D G K +DQI
Sbjct: 315 DYGKKYVDQI 324


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 4 PKTIDQI 10
PKT+D+I
Sbjct: 19 PKTLDEI 25


>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GPKTIDQ 9
GPK ID+
Sbjct: 266 GPKVIDE 272


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 3 GPKTIDQI 10
GPKTI Q+
Sbjct: 44 GPKTIIQV 51


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 3 GPKTIDQI 10
GPKTI Q+
Sbjct: 44 GPKTIIQV 51


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 1 DQGPKTIDQI 10
D PKT+D +
Sbjct: 321 DLAPKTMDYV 330


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DQGPKTIDQI 10
D PKT+D +
Sbjct: 321 DLAPKTMDYV 330




201|Sequence|1001|1010|TIDQIHKEAE

>sp|Y070_ARCFU|UNCHARACTERIZED protein AF_0070|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IDQIHK 7
IDQIHK
Sbjct: 58 IDQIHK 63


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TIDQIHKEAE 10
TID I+ EAE
Sbjct: 267 TIDWINPEAE 276


>sp|AATE_THEGJ|A-TYPE ATP synthase subunit E|Thermococcus gammatolerans (strain DSM

Query: 2 IDQIHKEAE 10
I +IH+EAE
Sbjct: 8 IQEIHREAE 16


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TIDQIHKEAE 10
TID I+ EAE
Sbjct: 263 TIDWINPEAE 272


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TIDQIHKEAE 10
TID I+ EAE
Sbjct: 257 TIDWINPEAE 266


>sp|SERB_METJA|PHOSPHOSERINE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TIDQIHKEA 9
TID+I +EA
Sbjct: 21 TIDEIAREA 29


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 IDQIHKEAE 10
IDQ+ +EAE
Sbjct: 486 IDQMQEEAE 494


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TIDQIHKEAE 10
TID I+ EAE
Sbjct: 263 TIDWINPEAE 272


>sp|TRPD_PICTO|ANTHRANILATE phosphoribosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 TIDQIHKEAE 10
T+D+I EAE
Sbjct: 214 TMDEISPEAE 223


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TIDQIHKEAE 10
TID+ H EAE
Sbjct: 47 TIDEWHLEAE 56




202|Sequence|1006|1015|HKEAEMEEHR

>sp|HEM1_METKA|GLUTAMYL-TRNA reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 HKEAEMEE 8
HKEAE+EE
Sbjct: 11 HKEAEVEE 18


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 HKEAEMEEHR 10
KEA+ +EH+
Sbjct: 16 QKEADRQEHK 25


>sp|MOAA_METMP|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HKEAEMEEH 9
HKE EEH
Sbjct: 28 HKEGRNEEH 36


>sp|MOAA_METM6|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C6 /

Query: 1 HKEAEMEEH 9
HKE EEH
Sbjct: 28 HKEGRNEEH 36




203|Sequence|1011|1020|MEEHREHIKV

>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 MEEHREH 7
+EEHREH
Sbjct: 281 LEEHREH 287


>sp|TRPD_METB6|ANTHRANILATE phosphoribosyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 MEEHREHIK 9
M EH H+K
Sbjct: 62 MREHTVHVK 70


>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 HREHIKV 10
H EHI+V
Sbjct: 55 HAEHIRV 61


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 MEEHREHIK 9
+EE RE++K
Sbjct: 166 LEEAREYVK 174


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MEEHRE 6
+EEHRE
Sbjct: 348 LEEHRE 353


>sp|CAS4_SACS2|CRISPR-ASSOCIATED exonuclease Cas4|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MEEHREHIK 9
+EEH H+K
Sbjct: 11 LEEHLSHVK 19




204|Sequence|1016|1025|EHIKVQQLMA

>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 1 EHIKVQQLM 9
EH K+QQ+M
Sbjct: 183 EHPKLQQIM 191


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 EHIKVQQLMA 10
+H K +Q+MA
Sbjct: 638 QHFKTEQIMA 647


>sp|METXA_METVS|HOMOSERINE O-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EHIKVQQLM 9
E+IK+ Q+M
Sbjct: 432 ENIKISQMM 440




205|Sequence|1021|1030|QQLMAKGSDK

>sp|CBIX_SACS2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LMAKGSDK 10
L+AKG+DK
Sbjct: 53 LLAKGADK 60


>sp|HIS6_METPE|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaerula palustris

Query: 1 QQLMAKGSDK 10
QQL+ G+DK
Sbjct: 91 QQLLRAGADK 100


>sp|HIS6_METB6|IMIDAZOLE glycerol phosphate synthase subunit|Methanoregula boonei (strain

Query: 1 QQLMAKGSDK 10
QQ++ G+DK
Sbjct: 91 QQILRAGADK 100




206|Sequence|1026|1035|KGSDKRRGGP

>sp|NEP1_THEVO|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma volcanium

Query: 2 GSDKRRGGP 10
G KRRG P
Sbjct: 55 GESKRRGRP 63


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 KGSDKRRGG 9
+GSDKR G
Sbjct: 480 RGSDKRGGA 488




207|Sequence|1031|1040|RRGGPPGPPI

>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 4 GPPGPPI 10
GPP PPI
Sbjct: 58 GPPNPPI 64


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus

Query: 1 RRGGPPGPPI 10
R G PGPPI
Sbjct: 35 RIQGRPGPPI 44


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 2 RGGPPGPPI 10
+GGP G PI
Sbjct: 127 QGGPTGSPI 135


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 2 RGGPPGPPI 10
+GGP G PI
Sbjct: 127 QGGPTGSPI 135


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 2 RGGPPGPPI 10
+GGP G PI
Sbjct: 127 QGGPTGSPI 135


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 2 RGGPPGPPI 10
+GGP G PI
Sbjct: 127 QGGPTGSPI 135


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 2 RGGPPGPPI 10
+GGP G PI
Sbjct: 127 QGGPTGSPI 135


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 2 RGGPPGPPI 10
+GGP G PI
Sbjct: 127 QGGPTGSPI 135


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 2 RGGPPGPPI 10
+GGP G PI
Sbjct: 127 QGGPTGSPI 135


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RGGPPGPPI 10
+GGP G PI
Sbjct: 127 QGGPTGSPI 135


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 RRGGPPGPP 9
R+G PP PP
Sbjct: 720 RKGLPPSPP 728


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RRGGPPGPP 9
R+G PP PP
Sbjct: 724 RKGLPPEPP 732


>sp|TTDA_METJA|PUTATIVE L(+)-tartrate dehydratase subunit alpha|Methanocaldococcus

Query: 3 GGPPGPPI 10
GG P PPI
Sbjct: 178 GGKPCPPI 185


>sp|RL10_PICTO|LARGE ribosomal subunit protein uL10|Picrophilus torridus (strain ATCC

Query: 5 PPGPPI 10
PPGP I
Sbjct: 127 PPGPKI 132


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 4 GPPGPP 9
GPP PP
Sbjct: 58 GPPSPP 63


>sp|G3P_NATPD|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RRGGPPG 7
RRGG PG
Sbjct: 168 RRGGDPG 174


>sp|RL10_THEVO|LARGE ribosomal subunit protein uL10|Thermoplasma volcanium (strain ATCC

Query: 3 GGPPGP 8
G PPGP
Sbjct: 125 GFPPGP 130


>sp|Y620_PYRFU|UPF0251 protein PF0620|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RGGPPGPPI 10
R GPP PPI
Sbjct: 30 RFGPPKPPI 38


>sp|KAE1B_METLZ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 RRGGPPGPPI 10
RRGG P P I
Sbjct: 387 RRGGVPVPVI 396


>sp|RL10_THEAC|LARGE ribosomal subunit protein uL10|Thermoplasma acidophilum (strain

Query: 3 GGPPGP 8
G PPGP
Sbjct: 125 GFPPGP 130


>sp|TH11_HALSA|PROBABLE transposase for insertion sequence|Halobacterium salinarum (strain

Query: 2 RGGPPGPPI 10
RG PG PI
Sbjct: 319 RGDNPGSPI 327


>sp|TH11_HALS3|PROBABLE transposase for insertion sequence|Halobacterium salinarum (strain

Query: 2 RGGPPGPPI 10
RG PG PI
Sbjct: 319 RGDNPGSPI 327


>sp|TRMY_PYRAB|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus abyssi

Query: 4 GPPGPP 9
GPP PP
Sbjct: 58 GPPDPP 63


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain

Query: 3 GGPPGPPI 10
G PPG P+
Sbjct: 31 GDPPGDPV 38


>sp|TRMY_THEON|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 4 GPPGPP 9
GPP PP
Sbjct: 58 GPPNPP 63


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GGPPGPPI 10
GGP PP+
Sbjct: 334 GGPVNPPL 341


>sp|TRMY_PYRFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus furiosus

Query: 4 GPPGPP 9
GPP PP
Sbjct: 58 GPPDPP 63


>sp|TBPD_HALSA|TATA-BOX-BINDING protein D|Halobacterium salinarum (strain ATCC 700922

Query: 5 PPGPPI 10
PP PP+
Sbjct: 94 PPSPPV 99


>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 1 RRGGPPGPPI 10
RRGGP P+
Sbjct: 236 RRGGPGRVPL 245


>sp|G3P_HALSA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RRGGPPG 7
RRGG PG
Sbjct: 167 RRGGDPG 173


>sp|G3P_HALS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RRGGPPG 7
RRGG PG
Sbjct: 167 RRGGDPG 173


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 2 RGGPPGPPI 10
RGG P P +
Sbjct: 29 RGGDPKPEV 37


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 RRGGPPG 7
R+G PPG
Sbjct: 335 RKGKPPG 341




208|Sequence|1036|1045|PGPPISRGLP

>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GPPISRGLP 10
GPP + G+P
Sbjct: 48 GPPTTNGMP 56


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 3 PPISRGLP 10
PP RGLP
Sbjct: 437 PPAPRGLP 444


>sp|DNAK_METTP|CHAPERONE protein DnaK|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PPISRGLP 10
PP RG+P
Sbjct: 438 PPAPRGIP 445


>sp|DNAK_METAR|CHAPERONE protein DnaK|Methanocella arvoryzae (strain DSM 22066

Query: 3 PPISRGLP 10
PP RG+P
Sbjct: 434 PPAPRGIP 441


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 3 PPISRGLP 10
PP RG+P
Sbjct: 437 PPAPRGIP 444


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PPISRGLP 10
PP RG+P
Sbjct: 437 PPAPRGIP 444


>sp|ACYP_SULTO|ACYLPHOSPHATASE tokodaii (strain DSM 16993

Query: 2 GPPISR 7
GPP+SR
Sbjct: 64 GPPLSR 69


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GPPISRGLP 10
GPP + G P
Sbjct: 49 GPPTANGRP 57


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GPPISRGLP 10
GPP + G P
Sbjct: 49 GPPTANGRP 57


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 GPPISRGLP 10
GPP + G P
Sbjct: 50 GPPTANGRP 58


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 3 PPISRGLP 10
PP RG+P
Sbjct: 437 PPAPRGIP 444


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PPISRGLP 10
PP RG+P
Sbjct: 437 PPAPRGIP 444


>sp|RNZ_SULTO|RIBONUCLEASE Z|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GPPISRGLP 10
G P RGLP
Sbjct: 12 GAPNKRGLP 20


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GPPISRGLP 10
G P RGLP
Sbjct: 12 GAPNKRGLP 20


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 3 PPISRGLP 10
PPI GLP
Sbjct: 196 PPIDAGLP 203


>sp|HPRL1_NATMM|HGPRTASE-LIKE protein 1|Natrialba magadii (strain ATCC 43099

Query: 4 PISRGLP 10
PIS GLP
Sbjct: 25 PISDGLP 31


>sp|CDPAS_SACS2|CDP-ARCHAEOL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GPPISRGLP 10
GP I RG P
Sbjct: 24 GPFIKRGTP 32


>sp|CDPAS_SACI7|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GPPISRGLP 10
GP I RG P
Sbjct: 24 GPFIKRGTP 32


>sp|CDPAS_SACI6|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GPPISRGLP 10
GP I RG P
Sbjct: 24 GPFIKRGTP 32


>sp|CDPAS_SACI4|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GPPISRGLP 10
GP I RG P
Sbjct: 24 GPFIKRGTP 32


>sp|CDPAS_SACI3|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GPPISRGLP 10
GP I RG P
Sbjct: 24 GPFIKRGTP 32


>sp|CDPAS_SACI2|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GPPISRGLP 10
GP I RG P
Sbjct: 24 GPFIKRGTP 32


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 3 PPISRGLP 10
PP RG+P
Sbjct: 439 PPAPRGVP 446


>sp|CDPAS_SACI1|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GPPISRGLP 10
GP I RG P
Sbjct: 24 GPFIKRGTP 32


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 3 PPISRGLP 10
PP RG+P
Sbjct: 437 PPAPRGVP 444


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 3 PPISRGLP 10
PP RG+P
Sbjct: 441 PPAPRGVP 448


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 PPISRGLP 10
PP RG+P
Sbjct: 442 PPAPRGVP 449


>sp|RS4E_DESA1|SMALL ribosomal subunit protein eS4|Desulfurococcus amylolyticus

Query: 1 PGP-PISRGLP 10
PGP PISR LP
Sbjct: 34 PGPHPISRSLP 44


>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 2 GPPISRGLP 10
G P RGLP
Sbjct: 12 GAPSRRGLP 20


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 3 PPISRGLP 10
PP RG+P
Sbjct: 440 PPAPRGIP 447


>sp|RRP4_KORCO|EXOSOME complex component Rrp4|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PGPPISRG 8
PG P++RG
Sbjct: 16 PGQPLARG 23


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GPPISRGLP 10
G P S+G+P
Sbjct: 157 GVPFSQGIP 165


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 2 GPPISRGLP 10
G P S+G+P
Sbjct: 161 GVPTSKGIP 169




209|Sequence|1041|1050|SRGLPLVDDG

>sp|SPSS_METJA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SRGLPLV 7
SRGLP+V
Sbjct: 255 SRGLPIV 261


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 LPLVDDG 10
+P+VDDG
Sbjct: 405 IPIVDDG 411


>sp|M556_METJA|METHYLATED protein MJ0556|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GLPLVDD 9
G+P+VDD
Sbjct: 56 GMPVVDD 62


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 SRGLPLVDD 9
+RG+PL DD
Sbjct: 370 TRGMPLSDD 378


>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RGLPLVD 8
RG PL+D
Sbjct: 120 RGFPLID 126


>sp|ARGJ_METJA|GLUTAMATE N-acetyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GLPLVDDG 10
G+PL D+G
Sbjct: 346 GIPLADEG 353


>sp|HERA_SACS2|DNA double-strand break repair helicase|Saccharolobus solfataricus

Query: 1 SRGLPLVDD 9
+RG P++DD
Sbjct: 46 TRGSPMLDD 54


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GLPLVDD 9
G PLVDD
Sbjct: 272 GAPLVDD 278


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SRGLPLVD 8
+R LPLVD
Sbjct: 23 ARSLPLVD 30


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SRGLPLVD 8
+R LPLVD
Sbjct: 23 ARSLPLVD 30


>sp|Y1141_METJA|UNCHARACTERIZED protein MJ1141|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SRGLPLVDDG 10
S+G PL+ DG
Sbjct: 187 SQGQPLLRDG 196


>sp|Y525_METKA|UNCHARACTERIZED protein MK0525|Methanopyrus kandleri (strain AV19 /

Query: 2 RGLPLVDD 9
R LP+VDD
Sbjct: 102 RRLPIVDD 109


>sp|Y1508_SULAC|PROTEIN Saci_1508|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RGLPLVDD 9
RGLPL ++
Sbjct: 110 RGLPLTEE 117


>sp|THTR_HALVD|PUTATIVE thiosulfate sulfurtransferase|Haloferax volcanii (strain ATCC 29605

Query: 2 RGLPLVD 8
+GLPLVD
Sbjct: 166 KGLPLVD 172


>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii

Query: 1 SRGLPLVDD 9
+ G PLVDD
Sbjct: 46 TTGSPLVDD 54


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RGLPLVDD 9
RG PL DD
Sbjct: 638 RGKPLADD 645


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 3 GLPLVDD 9
G+P+VDD
Sbjct: 482 GVPVVDD 488


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GLPLVDD 9
GLP VDD
Sbjct: 723 GLPNVDD 729


>sp|Y51B_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514.2|Methanocaldococcus

Query: 1 SRGLPLVDDG 10
++ LP++D+G
Sbjct: 76 NKKLPVIDEG 85


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RGLPLVDD 9
RG+PL +D
Sbjct: 152 RGIPLAND 159


>sp|TYW3_ARCFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 RGLPLVDDG 10
+GL LVDD
Sbjct: 149 KGLMLVDDA 157


>sp|ARCC_HALSA|CARBAMATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GLPLVDDG 10
G+P+V+DG
Sbjct: 186 GVPVVEDG 193


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RGLPLVDD 9
RG+PL +D
Sbjct: 152 RGVPLAND 159


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 2 RGLPLV 7
RGLPLV
Sbjct: 35 RGLPLV 40


>sp|TSR3_VULDI|16S rRNA aminocarboxypropyltransferase|Vulcanisaeta distributa

Query: 1 SRGLPLVD 8
SRGL L+D
Sbjct: 63 SRGLSLID 70


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GLPLVDD 9
GLP+V+D
Sbjct: 126 GLPVVED 132




210|Sequence|1046|1055|LVDDGGWNTV

>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VDDGGW 7
VDDGGW
Sbjct: 269 VDDGGW 274


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 DGGWNTV 10
DGGWN V
Sbjct: 344 DGGWNRV 350


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 DGGWNTV 10
DGGWN V
Sbjct: 344 DGGWNRV 350


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 4 DGGWNTV 10
DGGWN V
Sbjct: 344 DGGWNRV 350


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 4 DGGWNTV 10
DGGWN V
Sbjct: 345 DGGWNRV 351


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 DGGWNTV 10
DGGWN V
Sbjct: 344 DGGWNRV 350


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 DGGWNTV 10
DGGWN V
Sbjct: 344 DGGWNRV 350


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 3 DDGGW 7
DDGGW
Sbjct: 208 DDGGW 212


>sp|RL3_NATPD|LARGE ribosomal subunit protein uL3|Natronomonas pharaonis (strain ATCC

Query: 1 LVDDGGWNTV 10
LVDDGG +TV
Sbjct: 181 LVDDGGEHTV 190


>sp|PDAD_METAR|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocella arvoryzae (strain DSM 22066

Query: 3 DDGGWNTV 10
D+G W TV
Sbjct: 151 DEGNWTTV 158


>sp|NADM_METTH|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 LVDDGGWNTV 10
++DDG W ++
Sbjct: 136 MLDDGDWRSL 145


>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 LVDDGGW 7
LVDDGG+
Sbjct: 281 LVDDGGF 287


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 LVDDGGWNTV 10
L+ GGW V
Sbjct: 212 LIKSGGWKNV 221


>sp|T2M3_METJA|TYPE II restriction enzyme MjaIII|Methanocaldococcus jannaschii (strain

Query: 1 LVDDGGWNT 9
+ D GWNT
Sbjct: 250 ITDGKGWNT 258


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 LVDDGGWNTV 10
L DGGW V
Sbjct: 339 LQGDGGWERV 348


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 LVDDGGWNTV 10
L DGGW V
Sbjct: 632 LQGDGGWERV 641


>sp|HIS5_PICTO|IMIDAZOLE glycerol phosphate synthase subunit|Picrophilus torridus (strain

Query: 6 GWNTV 10
GWNTV
Sbjct: 107 GWNTV 111


>sp|HIS51_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 6 GWNTV 10
GWNTV
Sbjct: 121 GWNTV 125


>sp|Y725_METJA|UNCHARACTERIZED protein MJ0725|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DGGWNTV 10
+ GWNTV
Sbjct: 197 EDGWNTV 203


>sp|RS8_SACS2|SMALL ribosomal subunit protein uS8|Saccharolobus solfataricus (strain

Query: 2 VDDGGWNTV 10
+DDG W +
Sbjct: 53 IDDGRWGKI 61


>sp|RS8_SACI7|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 2 VDDGGWNTV 10
+DDG W +
Sbjct: 53 IDDGRWGKI 61


>sp|RS8_SACI6|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 2 VDDGGWNTV 10
+DDG W +
Sbjct: 53 IDDGRWGKI 61


>sp|RS8_SACI4|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 2 VDDGGWNTV 10
+DDG W +
Sbjct: 53 IDDGRWGKI 61


>sp|RS8_SACI3|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 2 VDDGGWNTV 10
+DDG W +
Sbjct: 53 IDDGRWGKI 61


>sp|RS8_SACI2|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 2 VDDGGWNTV 10
+DDG W +
Sbjct: 53 IDDGRWGKI 61


>sp|RS8_SACI1|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 2 VDDGGWNTV 10
+DDG W +
Sbjct: 53 IDDGRWGKI 61


>sp|RS8_METS5|SMALL ribosomal subunit protein uS8|Metallosphaera sedula (strain ATCC

Query: 2 VDDGGWNTV 10
+DDG W +
Sbjct: 53 IDDGRWGKI 61


>sp|RS8_IGNH4|SMALL ribosomal subunit protein uS8|Ignicoccus hospitalis (strain

Query: 2 VDDGGWNTV 10
+DDG W +
Sbjct: 53 IDDGRWGKI 61


>sp|RS8_HYPBU|SMALL ribosomal subunit protein uS8|Hyperthermus butylicus (strain DSM

Query: 2 VDDGGWNTV 10
+DDG W +
Sbjct: 53 IDDGRWGKI 61


>sp|HIS5_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 6 GWNTV 10
GWNTV
Sbjct: 118 GWNTV 122


>sp|RS8_DESA1|SMALL ribosomal subunit protein uS8|Desulfurococcus amylolyticus

Query: 2 VDDGGWNTV 10
+DDG W +
Sbjct: 53 IDDGRWGKI 61


>sp|RS8_STAMF|SMALL ribosomal subunit protein uS8|Staphylothermus marinus (strain

Query: 2 VDDGGWNTV 10
+DDG W +
Sbjct: 53 IDDGRWGKI 61


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 3 DDGGW 7
D+GGW
Sbjct: 230 DEGGW 234


>sp|SRP19_METBF|SIGNAL recognition particle 19 kDa|Methanosarcina barkeri (strain Fusaro

Query: 1 LVDDGGWNTV 10
LVDD G TV
Sbjct: 71 LVDDNGPKTV 80


>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC

Query: 2 VDDGGWNTV 10
+D GGW V
Sbjct: 55 LDKGGWADV 63


>sp|SDX_SACS2|PROBABLE sulredoxin|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DDGGW 7
D+GGW
Sbjct: 100 DNGGW 104


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 3 DDGGWNTV 10
+DG WN V
Sbjct: 365 EDGFWNLV 372


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 DDGGWN 8
+D GWN
Sbjct: 258 NDNGWN 263


>sp|RIFK_HALSA|RIBOFLAVIN kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LVDDGGWNTV 10
LV DG W TV
Sbjct: 66 LVSDGQWITV 75


>sp|PDAD_NITMS|PYRUVOYL-DEPENDENT arginine decarboxylase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 DGGWNTV 10
DG W TV
Sbjct: 169 DGKWTTV 175


>sp|MPCT_HALS3|TRANSDUCER protein MpcT|Halobacterium salinarum (strain ATCC 29341

Query: 2 VDDGGW 7
V DGGW
Sbjct: 609 VSDGGW 614


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC

Query: 1 LVDDGGWNTV 10
L +D GW+ V
Sbjct: 57 LANDAGWDVV 66


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 LVDDGGWNTV 10
L +D GW+ V
Sbjct: 57 LANDAGWDVV 66


>sp|RS8_AERPE|SMALL ribosomal subunit protein uS8|Aeropyrum pernix (strain ATCC

Query: 2 VDDGGW 7
+DDG W
Sbjct: 53 IDDGRW 58


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 LVDDGGW 7
LV DG W
Sbjct: 1195 LVGDGNW 1201


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 LVDDGGW 7
LV DG W
Sbjct: 1226 LVGDGNW 1232


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 LVDDGGW 7
LV DG W
Sbjct: 1051 LVGDGNW 1057


>sp|ENO_METLZ|ENOLASE labreanum (strain ATCC 43576

Query: 3 DDGGW 7
D+GGW
Sbjct: 193 DEGGW 197


>sp|DHQS_METAC|3-DEHYDROQUINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DDGGW 7
D+GGW
Sbjct: 11 DEGGW 15


>sp|DHQS_METBF|3-DEHYDROQUINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DDGGW 7
D+GGW
Sbjct: 11 DEGGW 15


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VDDGGWN 8
DDGGW
Sbjct: 328 TDDGGWE 334


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 2 VDDGGWN 8
DDGGW
Sbjct: 328 TDDGGWE 334


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 3 DDGGW 7
D+GGW
Sbjct: 199 DEGGW 203


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 2 VDDGGW 7
+DDG W
Sbjct: 404 LDDGSW 409


>sp|FER1_HALMA|FERREDOXIN-1 marismortui (strain ATCC 43049

Query: 1 LVDDGGWN 8
+VDD GW+
Sbjct: 11 VVDDNGWD 18


>sp|DHQS_METMA|3-DEHYDROQUINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DDGGW 7
D+GGW
Sbjct: 11 DEGGW 15


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 3 DDGGW 7
D+GGW
Sbjct: 199 DEGGW 203


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 3 DDGGW 7
D+GGW
Sbjct: 191 DEGGW 195




211|Sequence|1051|1060|GWNTVPISKG

>sp|GPMA_METVS|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC

Query: 1 GWNTVPISKG 10
GW VP+SKG
Sbjct: 22 GWVDVPLSKG 31


>sp|END4_THEVO|PROBABLE endonuclease 4|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WNTVPISK 9
WN+ PIS+
Sbjct: 49 WNSTPISE 56


>sp|LEUC1_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 3 NTVPISKG 10
NTVPISK
Sbjct: 280 NTVPISKA 287


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 NTVPISKG 10
NTVPISK
Sbjct: 281 NTVPISKA 288


>sp|PSLS_METTH|PHOSPHOSULFOLACTATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GWNTVPISK 9
GW T+P+ +
Sbjct: 50 GWGTLPLHR 58


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 2 WNTVPISKG 10
W+++PI +G
Sbjct: 44 WDSLPIGEG 52


>sp|RLME_HALLT|RIBOSOMAL RNA large subunit methyltransferase|Halorubrum lacusprofundi

Query: 1 GWNTVPISKG 10
G NT P++ G
Sbjct: 193 GLNTAPVAAG 202


>sp|FLPA_META3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus aeolicus (strain

Query: 1 GWNTVPISKG 10
G T+PI KG
Sbjct: 67 GLKTMPIKKG 76


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GWNTVPI 7
GW +PI
Sbjct: 546 GWKEIPI 552


>sp|RL24_METVS|LARGE ribosomal subunit protein uL24|Methanococcus vannielii (strain

Query: 1 GWNTVPISKG 10
G N +P+ KG
Sbjct: 41 GKNALPVKKG 50


>sp|RL24_METVA|LARGE ribosomal subunit protein uL24|Methanococcus vannielii

Query: 1 GWNTVPISKG 10
G N +P+ KG
Sbjct: 41 GKNALPVKKG 50


>sp|RL2_METPE|LARGE ribosomal subunit protein uL2|Methanosphaerula palustris (strain

Query: 3 NTVPISK 9
NT+PISK
Sbjct: 93 NTLPISK 99


>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 TVPISKG 10
T+PI KG
Sbjct: 118 TIPIKKG 124


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GWNTVPISKG 10
GW+ + I+KG
Sbjct: 154 GWSLLGIAKG 163


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WNTVPISKG 10
WNT ++KG
Sbjct: 171 WNTEYLAKG 179


>sp|GPMA_METMA|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GWNTVPISK 9
GW +P+S+
Sbjct: 25 GWIDIPLSR 33


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WNTVPISKG 10
W VP+ +G
Sbjct: 201 WRPVPLKEG 209


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WNTVPISKG 10
W VP+ +G
Sbjct: 201 WRPVPLKEG 209


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WNTVPISK 9
W+ +P++K
Sbjct: 119 WHVIPVAK 126




212|Sequence|1056|1065|PISKGSRPID

>sp|DLDH_HALSA|DIHYDROLIPOYL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ISKGSRPID 10
+S GSRPI+
Sbjct: 147 VSTGSRPIE 155


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC

Query: 1 PISKGSRPID 10
P +GSRP++
Sbjct: 48 PAVRGSRPLN 57


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 ISKGSRPID 10
I+ GSRPI+
Sbjct: 147 IATGSRPIE 155


>sp|CDC66_HALSA|ORC1-TYPE DNA replication protein 6|Halobacterium salinarum (strain ATCC

Query: 1 PISKGSRPID 10
P +GSRP++
Sbjct: 48 PAVRGSRPLN 57


>sp|UBIX_PYRAB|FLAVIN prenyltransferase UbiX|Pyrococcus abyssi (strain GE5 /

Query: 1 PISKGSRPID 10
PI+ GS P D
Sbjct: 62 PIASGSYPFD 71


>sp|UBIX_PYRHO|FLAVIN prenyltransferase UbiX|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PISKGSRPID 10
PI+ GS P D
Sbjct: 62 PIASGSYPFD 71


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 2 ISKGSRPI 9
ISKG++PI
Sbjct: 108 ISKGAKPI 115


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ISKGSRPI 9
ISKG++PI
Sbjct: 108 ISKGAKPI 115


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 ISKGSRPI 9
ISKG++PI
Sbjct: 108 ISKGAKPI 115


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ISKGSRPI 9
ISKG++PI
Sbjct: 108 ISKGAKPI 115


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ISKGSRPI 9
ISKG++PI
Sbjct: 108 ISKGAKPI 115


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 ISKGSRPI 9
ISKG++PI
Sbjct: 108 ISKGAKPI 115


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 ISKGSRPI 9
ISKG++PI
Sbjct: 108 ISKGAKPI 115


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ISKGSRPI 9
ISKG++PI
Sbjct: 108 ISKGAKPI 115


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 SKGSRPI 9
SKG+RPI
Sbjct: 109 SKGARPI 115


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 2 ISKGSRPI 9
ISKG++PI
Sbjct: 108 ISKGAKPI 115


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ISKGSRPI 9
I+KGS P+
Sbjct: 182 ITKGSHPV 189


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 ISKGSRPI 9
I+KGS P+
Sbjct: 182 ITKGSHPV 189


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 ISKGSRPI 9
I+KGS P+
Sbjct: 182 ITKGSHPV 189


>sp|RPO1N_HALMO|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halococcus morrhuae (Micrococcus

Query: 1 PISKGSRPID 10
P S G+ PID
Sbjct: 333 PSSHGAAPID 342


>sp|FLAA_METVO|FLAGELLIN A|Methanococcus voltae

Query: 3 SKGSRPID 10
S GS+P+D
Sbjct: 86 SPGSKPVD 93


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 1 PISKGSRPI 9
PI +GSR +
Sbjct: 244 PIKRGSRAV 252


>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ISKGSRPID 10
+SKG+ P D
Sbjct: 121 VSKGTTPTD 129




213|Sequence|1061|1070|SRPIDTSRLT

>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SRPIDTSRL 9
+RPIDT RL
Sbjct: 1001 TRPIDTGRL 1009


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SRPIDTSRL 9
+RPIDT RL
Sbjct: 1412 TRPIDTGRL 1420


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SRPIDTSRL 9
+RPIDT RL
Sbjct: 1498 TRPIDTGRL 1506


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 SRPIDTSRL 9
+RPIDT RL
Sbjct: 1001 TRPIDTGRL 1009


>sp|PUS10_THEAC|TRNA pseudouridine synthase Pus10|Thermoplasma acidophilum (strain ATCC

Query: 2 RPIDTSRL 9
RPID SRL
Sbjct: 286 RPIDESRL 293


>sp|LRS14_SACS2|HTH-TYPE transcriptional regulator lrs14|Saccharolobus solfataricus (strain

Query: 2 RPIDTSRLT 10
+PID R+T
Sbjct: 92 KPIDADRIT 100




214|Sequence|1066|1075|TSRLTKITKP

***** No hits found ******


215|Sequence|1071|1080|KITKPGSIDS

>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KITKPGSID 9
KITKP S++
Sbjct: 407 KITKPNSLN 415


>sp|KAD6_METBF|PUTATIVE adenylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 4 KPGSID 9
KPGSID
Sbjct: 171 KPGSID 176


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 KITKPGSID 9
KITKPG D
Sbjct: 126 KITKPGIQD 134


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KITKPGSI 8
+++KPGS+
Sbjct: 294 RVSKPGSV 301


>sp|RS3_METKA|SMALL ribosomal subunit protein uS3|Methanopyrus kandleri (strain AV19 /

Query: 2 ITKPGSI 8
+TKPG+I
Sbjct: 178 VTKPGAI 184


>sp|CBID_METS3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 KITKPG 6
KITKPG
Sbjct: 105 KITKPG 110




216|Sequence|1076|1085|GSIDSNNQLF

>sp|Y1987_ARCFU|UNCHARACTERIZED protein AF_1987|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GSIDSNNQL 9
GS+DS N+L
Sbjct: 149 GSVDSINKL 157


>sp|TKSU_THEKO|TK-SUBTILISIN kodakarensis (strain ATCC BAA-918

Query: 1 GSIDSNNQL 9
G+IDSN+ +
Sbjct: 307 GAIDSNDNI 315




217|Sequence|1081|1090|NNQLFAPGGR

>sp|DHQS_KORCO|3-DEHYDROQUINATE synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 NNQLFAPGGR 10
+N L APGG+
Sbjct: 222 SNYLLAPGGK 231


>sp|ARLY_PYRAR|ARGININOSUCCINATE lyase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 NQLFAPGGR 10
N L+A GGR
Sbjct: 218 NTLYASGGR 226


>sp|KAE1B_METLZ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 QLFAPG 8
QLFAPG
Sbjct: 328 QLFAPG 333


>sp|HISX_METMA|HISTIDINOL dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 FAPGGR 10
+APGGR
Sbjct: 129 YAPGGR 134


>sp|HISX_METBF|HISTIDINOL dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 5 FAPGGR 10
+APGGR
Sbjct: 129 YAPGGR 134


>sp|HISX_METAC|HISTIDINOL dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 FAPGGR 10
+APGGR
Sbjct: 129 YAPGGR 134


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii

Query: 1 NNQLFAPGGR 10
N Q+ +P GR
Sbjct: 6 NKQIISPTGR 15


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NNQLFAPGGR 10
NN F P GR
Sbjct: 82 NNARFFPDGR 91


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NNQLFAPGGR 10
N ++PGG+
Sbjct: 92 NKDAYSPGGK 101




218|Sequence|1086|1095|APGGRLSWGK

>sp|Y104_SACS2|UNCHARACTERIZED aminotransferase SSO0104|Saccharolobus solfataricus (strain ATCC

Query: 1 APGGRLSW 8
APG RL W
Sbjct: 245 APGLRLGW 252


>sp|PSTB_PYRAE|PHOSPHATE import ATP-binding protein PstB|Pyrobaculum aerophilum (strain ATCC

Query: 1 APGGRLSWGK 10
AP G+LS G+
Sbjct: 142 APAGKLSGGQ 151


>sp|XDH1_HALVD|D-XYLOSE 1-dehydrogenase [NADP(+)] 1|Haloferax volcanii (strain ATCC 29605

Query: 3 GGRLSWG 9
G RLSWG
Sbjct: 295 GFRLSWG 301


>sp|RIB7_METJA|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GGRLSWG 9
GG L+WG
Sbjct: 156 GGTLNWG 162


>sp|RL22_PYRAE|LARGE ribosomal subunit protein uL22|Pyrobaculum aerophilum (strain

Query: 1 APGGRLSWGK 10
AP R+SW K
Sbjct: 36 APEQRMSWKK 45


>sp|RL22_PYRCJ|LARGE ribosomal subunit protein uL22|Pyrobaculum calidifontis (strain

Query: 1 APGGRLSWGK 10
AP R+SW K
Sbjct: 35 APEQRMSWKK 44


>sp|ARAT1_THELN|AROMATIC-AMINO-ACID aminotransferase 1|Thermococcus litoralis (strain ATCC 51850

Query: 1 APGGRLSW 8
APG R+ W
Sbjct: 261 APGFRIGW 268


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGGRLSWG 9
PGG +WG
Sbjct: 182 PGGTEAWG 189


>sp|RL22_PYRAR|LARGE ribosomal subunit protein uL22|Pyrobaculum arsenaticum (strain

Query: 1 APGGRLSWGK 10
AP R+SW K
Sbjct: 36 APEQRMSWKK 45


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 APGGRLSW 8
A GG+L+W
Sbjct: 209 AGGGKLTW 216


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 APGGRLSW 8
A GG+L+W
Sbjct: 209 AGGGKLTW 216


>sp|Y672_PYRHO|UPF0252 protein PH0672|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGGRLSW 8
PGG + W
Sbjct: 58 PGGTIEW 64


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 APGGRLSW 8
A GG+L+W
Sbjct: 209 AGGGKLTW 216


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 APGGRLSW 8
A GG+L+W
Sbjct: 205 AGGGKLTW 212


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 APGGRLSWG 9
+ GGR WG
Sbjct: 689 STGGRAFWG 697


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 APGGRLSWG 9
+ GGR WG
Sbjct: 689 STGGRAFWG 697


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 APGGRLSWG 9
+ GGR WG
Sbjct: 689 STGGRAFWG 697


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 APGGRLSWG 9
+ GGR WG
Sbjct: 689 STGGRAFWG 697


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 APGGRLSWG 9
+ GGR WG
Sbjct: 689 STGGRAFWG 697


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 APGGRLSWG 9
+ GGR WG
Sbjct: 689 STGGRAFWG 697


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 APGGRLSWG 9
+ GGR WG
Sbjct: 689 STGGRAFWG 697


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 APGGRLSWG 9
+ GGR WG
Sbjct: 689 STGGRAFWG 697


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 2 PGGRLSWGK 10
PGGR W K
Sbjct: 367 PGGREIWLK 375


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GGRLSWG 9
GG L+WG
Sbjct: 229 GGCLAWG 235


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 2 PGGRLSWGK 10
PGGR W K
Sbjct: 370 PGGREIWLK 378


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PGGRLSW 8
PGG + W
Sbjct: 132 PGGTVGW 138


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GGRLSW 8
GG+L+W
Sbjct: 205 GGKLTW 210


>sp|Y2166_ARCFU|UNCHARACTERIZED protein AF_2166|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GGRLSWG 9
GG +SWG
Sbjct: 64 GGLVSWG 70


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GGRLSWG 9
GG L WG
Sbjct: 227 GGALVWG 233




219|Sequence|1091|1100|LSWGKGSSGG

>sp|Y623_METJA|PROBABLE metallophosphoesterase MJ0623|Methanocaldococcus jannaschii

Query: 3 WGKGSSGG 10
WG+G +GG
Sbjct: 8 WGRGRTGG 15


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 3 WGKGSSGG 10
WGKG G
Sbjct: 447 WGKGKRAG 454


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 WGKGSSG 9
WG+G+ G
Sbjct: 30 WGRGADG 36


>sp|DNLI_METKA|DNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 WGKGSSGG 10
WGKG G
Sbjct: 440 WGKGKRKG 447


>sp|Y4660_METAC|UPF0200 protein MA_4660|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LSWGKGSS 8
LSWG G +
Sbjct: 145 LSWGMGEA 152


>sp|Y38K_THETE|UNCHARACTERIZED 38 kDa protein in|Thermoproteus tenax

Query: 1 LSWGKGSSG 9
L+WG GS+G
Sbjct: 99 LAWGLGSAG 107


>sp|Y975_METBF|UPF0200 protein Mbar_A0975|Methanosarcina barkeri (strain Fusaro /

Query: 1 LSWGKGSS 8
LSWG G +
Sbjct: 144 LSWGMGEA 151


>sp|GUAAA_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit A|Archaeoglobus fulgidus

Query: 4 GKGSSGG 10
GKGS GG
Sbjct: 89 GKGSMGG 95


>sp|Y1313_METMA|UPF0200 protein MM_1313|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LSWGKGSS 8
LSWG G +
Sbjct: 145 LSWGMGEA 152


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 LSWGKGSS 8
+S+GKG+S
Sbjct: 349 ISYGKGAS 356


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 1 LSWGKGSS 8
+S+GKG+S
Sbjct: 355 ISYGKGAS 362


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LSWGKGSS 8
+S+GKG+S
Sbjct: 356 ISYGKGAS 363


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LSWGKGSS 8
+S+GKG+S
Sbjct: 357 ISYGKGAS 364


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LSWGKGSS 8
+S+GKG+S
Sbjct: 354 ISYGKGAS 361


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LSWGKGSS 8
+S+GKG+S
Sbjct: 355 ISYGKGAS 362


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 LSWGKGSS 8
+S+GKG+S
Sbjct: 355 ISYGKGAS 362


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 WGKGSSGG 10
+GKG GG
Sbjct: 455 YGKGKRGG 462


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 WGKGSSGG 10
+GKG GG
Sbjct: 455 YGKGKRGG 462


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 WGKGSSGG 10
+GKG GG
Sbjct: 455 YGKGKRGG 462


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 WGKGSSGG 10
+GKG GG
Sbjct: 455 YGKGKRGG 462


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 WGKGSSGG 10
+GKG GG
Sbjct: 455 YGKGKRGG 462


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 WGKGSSGG 10
+GKG GG
Sbjct: 455 YGKGKRGG 462


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 WGKGSSGG 10
+GKG GG
Sbjct: 455 YGKGKRGG 462


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 WGKGSSGG 10
+GKG GG
Sbjct: 455 YGKGKRGG 462


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 WGKGSSGG 10
+GKG GG
Sbjct: 456 YGKGKRGG 463


>sp|SUCC_METTH|SUCCINATE--COA ligase [ADP-forming] subunit beta|Methanothermobacter

Query: 1 LSWGKGSSGG 10
L+ G+G +GG
Sbjct: 49 LTGGRGKAGG 58


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 1 LSWGKGSS 8
+S+GKG+S
Sbjct: 350 ISYGKGAS 357


>sp|SPSS1_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LSWGKGSS 8
+SWG G S
Sbjct: 37 ISWGDGYS 44


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSWGKG 6
LSWG G
Sbjct: 213 LSWGAG 218




220|Sequence|1096|1105|GSSGGSGAKP

>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 SGGSGAKP 10
SGG G KP
Sbjct: 887 SGGGGGKP 894


>sp|NDK_THEAC|NUCLEOSIDE diphosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GSSGGSGAKP 10
GS+ GS A+P
Sbjct: 90 GSTDGSKAQP 99


>sp|RRP41_HYPBU|EXOSOME complex component Rrp41|Hyperthermus butylicus (strain DSM 5456

Query: 3 SGGSGAKP 10
+GG+G KP
Sbjct: 2 AGGAGEKP 9


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 1 GSSGGSGAKP 10
G GG+GA P
Sbjct: 346 GLRGGTGAAP 355


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 1 GSSGGSGAKP 10
G GG+GA P
Sbjct: 345 GYKGGTGAAP 354




221|Sequence|1101|1110|SGAKPSDAAS

>sp|DHYS_SULTO|PROBABLE deoxyhypusine synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SGAKPSDAAS 10
SGAKP +A S
Sbjct: 272 SGAKPREAIS 281


>sp|DHYS_SACS2|PROBABLE deoxyhypusine synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 SGAKPSDAAS 10
SGAKP +A S
Sbjct: 273 SGAKPREAIS 282


>sp|DHYS_SACI6|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SGAKPSDAAS 10
SGAKP +A S
Sbjct: 273 SGAKPREAIS 282


>sp|DHYS_SACI7|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SGAKPSDAAS 10
SGAKP +A S
Sbjct: 273 SGAKPREAIS 282


>sp|DHYS_SACI4|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SGAKPSDAAS 10
SGAKP +A S
Sbjct: 273 SGAKPREAIS 282


>sp|DHYS_SACI3|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 SGAKPSDAAS 10
SGAKP +A S
Sbjct: 273 SGAKPREAIS 282


>sp|DHYS_SACI2|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SGAKPSDAAS 10
SGAKP +A S
Sbjct: 273 SGAKPREAIS 282


>sp|DHYS_SACI1|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SGAKPSDAAS 10
SGAKP +A S
Sbjct: 273 SGAKPREAIS 282


>sp|GATE_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 2 GAKPSDAAS 10
G KPS AAS
Sbjct: 493 GVKPSLAAS 501


>sp|GATE_THEGJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus gammatolerans (strain DSM

Query: 2 GAKPSDAAS 10
G KPS AAS
Sbjct: 493 GVKPSLAAS 501


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 2 GAKPSDAAS 10
G KPS AAS
Sbjct: 496 GVKPSLAAS 504


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GAKPSDAAS 10
G KPS AAS
Sbjct: 492 GVKPSLAAS 500


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 2 GAKPSDAAS 10
G KPS AAS
Sbjct: 496 GVKPSLAAS 504


>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 1 SGAKPSDAAS 10
SGA PS+ S
Sbjct: 296 SGAPPSEGVS 305


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 SGAKPSDAAS 10
SGA PS+ S
Sbjct: 296 SGAPPSEGVS 305


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SGAKPSDAAS 10
SGA PS+ S
Sbjct: 296 SGAPPSEGVS 305


>sp|DHYS_PYRFU|PROBABLE deoxyhypusine synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SGAKPSDAAS 10
SGA PS+ S
Sbjct: 296 SGAPPSEGVS 305


>sp|DHYS_PYRAB|PROBABLE deoxyhypusine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 SGAKPSDAAS 10
SGA PS+ S
Sbjct: 295 SGAPPSEGVS 304


>sp|SURE_METB6|5'-NUCLEOTIDASE SurE|Methanoregula boonei (strain DSM 21154

Query: 2 GAKPSDAA 9
G KP+DAA
Sbjct: 69 GGKPTDAA 76


>sp|IF5A_METM5|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C5 /

Query: 1 SGAKPSDAAS 10
+G KPSD S
Sbjct: 2 AGTKPSDLGS 11


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 SGAKPSDAAS 10
SGA P+DA +
Sbjct: 226 SGADPNDATT 235




222|Sequence|1106|1115|SDAASEAARP

***** No hits found ******


223|Sequence|1111|1120|EAARPATSTL

***** No hits found ******


224|Sequence|1116|1125|ATSTLNRFSA

***** No hits found ******


225|Sequence|1121|1130|NRFSALQQAV

***** No hits found ******


226|Sequence|1126|1135|LQQAVPTEST

>sp|SECF_HALWD|PROTEIN-EXPORT membrane protein SecF|Haloquadratum walsbyi (strain DSM 16790

Query: 3 QAVPTEST 10
QAVPT +T
Sbjct: 81 QAVPTANT 88




227|Sequence|1131|1140|PTESTDNRRV

>sp|GPGS_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 TESTDNR 8
TESTDNR
Sbjct: 299 TESTDNR 305


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 1 PTESTDNR 8
P ES DNR
Sbjct: 447 PDESRDNR 454




228|Sequence|1136|1145|DNRRVVQRSS

>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DNRRVVQRSS 10
DN RV+ RSS
Sbjct: 85 DNSRVIVRSS 94




229|Sequence|1141|1150|VQRSSLSRER

***** No hits found ******


230|Sequence|1146|1155|LSRERGEKAG

>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 ERGEKAG 10
ERGEKAG
Sbjct: 50 ERGEKAG 56


>sp|Y383_PYRFU|UNCHARACTERIZED protein PF0383|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LSRERGEKA 9
+S ERGEKA
Sbjct: 96 ISNERGEKA 104


>sp|Y1969_ARCFU|PROTEIN AF_1969|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSRERGEKA 9
L+RE GEKA
Sbjct: 5 LTREEGEKA 13


>sp|POK_METHJ|PANTOATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LSRERGEKAG 10
LSRE EK+G
Sbjct: 215 LSREFAEKSG 224


>sp|NTPTH_METS5|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Metallosphaera sedula (strain ATCC 51363

Query: 3 RERGEKAG 10
RERGE+ G
Sbjct: 49 RERGERTG 56


>sp|FEN_ARCFU|FLAP endonuclease 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSRERGEKA 9
SRER EKA
Sbjct: 310 FSRERVEKA 318


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 2 SRERGEKA 9
SRERGE A
Sbjct: 194 SRERGELA 201




231|Sequence|1151|1160|GEKAGDRGDR

>sp|G3P_METM7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 GEKAGDRGD 9
GEKAGD D
Sbjct: 111 GEKAGDAQD 119


>sp|G3P_METM6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 1 GEKAGDRGD 9
GEKAGD D
Sbjct: 111 GEKAGDAQD 119


>sp|G3P_METM5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 GEKAGDRGD 9
GEKAGD D
Sbjct: 111 GEKAGDAQD 119


>sp|G3P_METMP|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GEKAGDRGD 9
GEKAGD D
Sbjct: 111 GEKAGDAQD 119


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 GEKAGDRGD 9
EKAG RGD
Sbjct: 449 AEKAGLRGD 457


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 2 EKAGDR 7
EKAGDR
Sbjct: 570 EKAGDR 575


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 2 EKAGDR 7
EKAGDR
Sbjct: 576 EKAGDR 581


>sp|TRPF_HALLT|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 EKAGDRGDR 10
E+AGD DR
Sbjct: 146 ERAGDLADR 154




232|Sequence|1156|1165|DRGDRLERSE

>sp|SYP_METKA|PROLINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 RGDRLERSE 10
RGDRLE SE
Sbjct: 15 RGDRLEFSE 23


>sp|IMDH_NITMS|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 RGDRLERSE 10
+GD LERSE
Sbjct: 223 KGDFLERSE 231


>sp|TRPA_HALMA|TRYPTOPHAN synthase alpha chain|Haloarcula marismortui (strain ATCC 43049

Query: 2 RGDRLER 8
+GDRLER
Sbjct: 171 KGDRLER 177


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DRGDRLE 7
DRGDR++
Sbjct: 259 DRGDRVQ 265


>sp|TRPA_NATPD|TRYPTOPHAN synthase alpha chain|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GDRLER 8
GDRLER
Sbjct: 156 GDRLER 161




233|Sequence|1161|1170|LERSERGGDR

>sp|DHYS_PYRAE|PROBABLE deoxyhypusine synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LERSERGGDR 10
L R++RGG R
Sbjct: 183 LARTKRGGSR 192


>sp|Y1005_METKA|PUTATIVE HTH-type transcriptional regulatory protein|Methanopyrus kandleri

Query: 1 LERSERGGDR 10
L R+E GGDR
Sbjct: 216 LARAEEGGDR 225




234|Sequence|1166|1175|RGGDRGDRLD

>sp|Y1212_ARCFU|UNCHARACTERIZED protein AF_1212|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GGDRGDRL 9
GGDR D L
Sbjct: 258 GGDRSDLL 265


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RGGDRGDRL 9
+GG+ G+RL
Sbjct: 102 KGGEAGERL 110


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RGGDRGDRL 9
+GG+ G+RL
Sbjct: 102 KGGEEGERL 110




235|Sequence|1171|1180|GDRLDRARTP

>sp|SPSS_META3|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GDRLDRARTP 10
G RLD+ TP
Sbjct: 56 GGRLDKVETP 65


>sp|DGGGP_METLZ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GDRLDRART 9
GDRL ART
Sbjct: 181 GDRLGGART 189


>sp|SPSS_METM5|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C5 /

Query: 3 RLDRARTP 10
RLDR TP
Sbjct: 55 RLDRIETP 62


>sp|APGM_PYRIL|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DRLDRARTP 10
+RLD+A TP
Sbjct: 322 ERLDKALTP 330


>sp|DGGGP_METBU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GDRLDRART 9
GD+ D ART
Sbjct: 189 GDKKDGART 197




236|Sequence|1176|1185|RARTPATKRS

>sp|GLNA_HALVD|GLUTAMINE synthetase|Haloferax volcanii (strain ATCC 29605

Query: 2 ARTPATKR 9
ARTPA R
Sbjct: 336 ARTPAASR 343


>sp|GLNA3_HALMT|GLUTAMINE synthetase 3|Haloferax mediterranei (strain ATCC 33500

Query: 2 ARTPATKR 9
ARTPA R
Sbjct: 336 ARTPAASR 343




237|Sequence|1181|1190|ATKRSFSKEV

>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 3 KRSFSKEV 10
+RSF KEV
Sbjct: 189 RRSFDKEV 196


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 3 KRSFSKEV 10
+RSF KEV
Sbjct: 188 RRSFDKEV 195




238|Sequence|1186|1195|FSKEVEERSR

>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FSKEVEERSR 10
F KE EER R
Sbjct: 231 FEKEAEERRR 240


>sp|OTC_PYRCJ|ORNITHINE carbamoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FSKEVEERSR 10
F KE EER R
Sbjct: 231 FEKEAEERRR 240


>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FSKEVEERSR 10
F KE EER R
Sbjct: 231 FEKEAEERRR 240


>sp|BUD32_ARCFU|PROBABLE serine/threonine-protein kinase BUD32 homolog|Archaeoglobus

Query: 2 SKEVEERSR 10
+KE+EER R
Sbjct: 179 AKEIEERGR 187


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 1 FSKEVEERSR 10
F +EVEER R
Sbjct: 238 FKREVEERFR 247


>sp|Y1114_METJA|UNCHARACTERIZED protein MJ1114|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSKEVEERSR 10
FS+E+EE R
Sbjct: 163 FSEEIEEGIR 172


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 KEVEERSR 10
KEVE+R+R
Sbjct: 539 KEVEKRAR 546


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 KEVEERSR 10
KEVE+R+R
Sbjct: 538 KEVEKRAR 545


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 KEVEERSR 10
KEVE+R+R
Sbjct: 536 KEVEKRAR 543


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 KEVEERSR 10
KEVE+R+R
Sbjct: 534 KEVEKRAR 541


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 FSKEVEERSR 10
+ KEVE+R R
Sbjct: 536 YIKEVEKRGR 545




239|Sequence|1191|1200|EERSRERPSQ

>sp|COXX_HYPBU|PROTOHEME IX farnesyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 ERSRERP 8
ER+R+RP
Sbjct: 76 ERTRDRP 82




240|Sequence|1196|1205|ERPSQPEGLR

>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ERPSQPEGL 9
ERP+ PEG+
Sbjct: 1952 ERPTMPEGV 1960


>sp|DEOC_THEAC|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ERPSQPEGLR 10
+RP PE LR
Sbjct: 219 KRPIDPEKLR 228


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ERPSQPEG 8
ERP PEG
Sbjct: 360 ERPVHPEG 367


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 4 SQPEGL 9
SQPEGL
Sbjct: 202 SQPEGL 207


>sp|RNZ_METKA|RIBONUCLEASE Z|Methanopyrus kandleri (strain AV19 /

Query: 2 RPSQPEGLR 10
RP+ PE +R
Sbjct: 193 RPADPENVR 201




241|Sequence|1201|1210|PEGLRKAASL

>sp|RIFK_METHJ|RIBOFLAVIN kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PEGLRKAASL 10
PEGLRK SL
Sbjct: 200 PEGLRKRFSL 209


>sp|CPGS_THESM|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus sibiricus (strain

Query: 1 PEGLRKAA 8
PEGL KAA
Sbjct: 336 PEGLEKAA 343


>sp|PGK_AERPE|PHOSPHOGLYCERATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PEGLRKAASL 10
PE LR ASL
Sbjct: 103 PEALRTVASL 112


>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PEGLRKAAS 9
PEGLR+ A
Sbjct: 27 PEGLRREAE 35


>sp|UPPS_THEKO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermococcus

Query: 1 PEGLRKAA 8
PE +RKAA
Sbjct: 136 PENVRKAA 143


>sp|AROE_METAC|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 1 PEGLRKA 7
PE LRKA
Sbjct: 41 PENLRKA 47


>sp|RFRNP_AERPE|RNA-FREE ribonuclease P|Aeropyrum pernix (strain ATCC 700893

Query: 2 EGLRKAA 8
EGLR+AA
Sbjct: 179 EGLRRAA 185




242|Sequence|1206|1215|KAASLTEDRD

>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain

Query: 2 AASLTEDRD 10
AA LTED D
Sbjct: 53 AAELTEDAD 61




243|Sequence|1211|1220|TEDRDRGRDA

>sp|HTPX_THESM|PROTEASE HtpX homolog|Thermococcus sibiricus (strain DSM 12597

Query: 4 RDRGRDA 10
RDR RDA
Sbjct: 175 RDRDRDA 181


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 4 RDRGRD 9
RD+GRD
Sbjct: 668 RDKGRD 673


>sp|LYSX_SACS2|ALPHA-AMINOADIPATE--LYSW ligase LysX|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EDRDRG 7
ED+DRG
Sbjct: 233 EDKDRG 238




244|Sequence|1216|1225|RGRDAVKREA

>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RGRDAVKRE 9
RG D VKRE
Sbjct: 429 RGSDLVKRE 437


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RGRDAVKRE 9
RG D VKRE
Sbjct: 429 RGSDLVKRE 437


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GRDAVKREA 10
G +AVKREA
Sbjct: 147 GAEAVKREA 155


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 RGRDAVKR 8
RGRDA++R
Sbjct: 68 RGRDALER 75


>sp|RL13_METBF|LARGE ribosomal subunit protein uL13|Methanosarcina barkeri (strain

Query: 1 RGRDAVKR 8
RGRDA+ R
Sbjct: 87 RGRDAMSR 94


>sp|G1PDH_PYRFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GRDAVKREA 10
GRD + REA
Sbjct: 327 GRDGLTREA 335


>sp|RL13_METAC|LARGE ribosomal subunit protein uL13|Methanosarcina acetivorans (strain

Query: 1 RGRDAVKR 8
RGRDA+ R
Sbjct: 90 RGRDAMSR 97


>sp|RL13_METMA|LARGE ribosomal subunit protein uL13|Methanosarcina mazei (strain ATCC

Query: 1 RGRDAVKR 8
RGRDA+ R
Sbjct: 87 RGRDAMSR 94


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 2 GRDAVKRE 9
GRD ++RE
Sbjct: 829 GRDGIRRE 836


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 RGRDAVKRE 9
RG D V+RE
Sbjct: 429 RGSDLVRRE 437


>sp|RL13_PYRIL|LARGE ribosomal subunit protein uL13|Pyrobaculum islandicum (strain DSM

Query: 1 RGRDAVKR 8
RGR A+KR
Sbjct: 108 RGRSALKR 115


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RGRDAVKRE 9
RG D V+RE
Sbjct: 429 RGSDLVRRE 437




245|Sequence|1221|1230|VKREAALPPV

>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VKREAALP 8
VKRE ALP
Sbjct: 349 VKREKALP 356


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKREAALP 8
VKRE ALP
Sbjct: 78 VKREIALP 85


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KREAALPP 9
++EAALPP
Sbjct: 5 EKEAALPP 12


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KREAALPP 9
++EAALPP
Sbjct: 5 EKEAALPP 12


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KREAALPP 9
++EAALPP
Sbjct: 5 EKEAALPP 12


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EAALPPV 10
EAA+PP+
Sbjct: 114 EAAMPPL 120


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 3 REAALPPV 10
REA LPP+
Sbjct: 306 READLPPL 313


>sp|RS15_THEPD|SMALL ribosomal subunit protein uS15|Thermofilum pendens (strain DSM 2475

Query: 2 KREAALPP 9
KRE LPP
Sbjct: 128 KREGILPP 135




246|Sequence|1226|1235|ALPPVSPLKA

>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 ALPPVSPLK 9
++PPV PL+
Sbjct: 480 SVPPVKPLR 488


>sp|COFC_META3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ALPPVSPLKA 10
AL PVSPL A
Sbjct: 4 ALIPVSPLNA 13


>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LPPVSPL 8
LPP SP+
Sbjct: 215 LPPTSPI 221


>sp|COFC_METM6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 ALPPVSPL 8
AL PVSPL
Sbjct: 4 ALIPVSPL 11


>sp|COFC_METM5|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 ALPPVSPL 8
AL PVSPL
Sbjct: 4 ALIPVSPL 11


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 2 LPPVSPLK 9
+PP+ PL+
Sbjct: 481 VPPIRPLR 488


>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 2 LPPVSPL 8
LPP SP+
Sbjct: 214 LPPTSPV 220


>sp|TF2B_METS3|TRANSCRIPTION initiation factor IIB|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LPPVSPL 8
LPP SP+
Sbjct: 214 LPPTSPV 220


>sp|COFC_METM7|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 ALPPVSPL 8
AL PVSPL
Sbjct: 4 ALIPVSPL 11


>sp|COFC_METMP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ALPPVSPL 8
AL PVSPL
Sbjct: 4 ALIPVSPL 11


>sp|COFC_METVS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ALPPVSPL 8
AL PVSPL
Sbjct: 4 ALIPVSPL 11


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 2 LPPVSPLK 9
+PP+ PL+
Sbjct: 483 VPPIKPLR 490


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PPVSPLK 9
PP+SPL+
Sbjct: 273 PPLSPLE 279


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC

Query: 2 LPPVSPLK 9
L PV PLK
Sbjct: 6 LKPVDPLK 13


>sp|FAU1_PYRAR|PROBABLE ribonuclease FAU-1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PPVSPLKA 10
PP+ PLK
Sbjct: 132 PPIGPLKG 139


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LPPVSPL 8
LPPV PL
Sbjct: 207 LPPVEPL 213


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LPPVSPL 8
LPPV PL
Sbjct: 207 LPPVEPL 213


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LPPVSPL 8
LPPV PL
Sbjct: 207 LPPVEPL 213


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LPPVSPL 8
LPPV PL
Sbjct: 207 LPPVEPL 213


>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PPVSPLKA 10
PPV PL+
Sbjct: 131 PPVGPLRG 138




247|Sequence|1231|1240|SPLKAALSEE

>sp|G1PDH_IGNH4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SPLKAALSEE 10
SPL ALSE+
Sbjct: 212 SPLLKALSED 221




248|Sequence|1236|1245|ALSEEELEKK

>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LSEEELEKK 10
+SEEELEK+
Sbjct: 517 VSEEELEKR 525


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LSEEELEKK 10
+SEEELEK+
Sbjct: 513 VSEEELEKR 521


>sp|Y130_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 1 ALSEEELEKK 10
LSEEE+EK+
Sbjct: 105 GLSEEEVEKR 114


>sp|RS13_NANEQ|SMALL ribosomal subunit protein uS13|Nanoarchaeum equitans (strain

Query: 1 ALSEEELEK 9
+LS+EELEK
Sbjct: 59 SLSDEELEK 67


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LSEEELEK 9
LSEEE+EK
Sbjct: 485 LSEEEIEK 492


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ALSEEELE 8
ALS EELE
Sbjct: 2 ALSREELE 9


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LSEEELEKK 10
++EEELEK+
Sbjct: 513 VTEEELEKR 521


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LSEEELEKK 10
+SEEELE++
Sbjct: 513 VSEEELEQR 521


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALSEEELEK 9
ALSEE+L+K
Sbjct: 100 ALSEEDLKK 108


>sp|ECFA_METMP|ENERGY-COUPLING factor transporter ATP-binding protein|Methanococcus maripaludis

Query: 1 ALSEEELEKK 10
LS+EE+EK+
Sbjct: 110 GLSKEEIEKR 119


>sp|PSB_ACIB4|PROTEASOME subunit beta|Aciduliprofundum boonei (strain DSM 19572

Query: 2 LSEEELEKK 10
LS+EE+EK+
Sbjct: 195 LSQEEVEKR 203


>sp|RS13_THEPD|SMALL ribosomal subunit protein uS13|Thermofilum pendens (strain DSM

Query: 1 ALSEEELEK 9
LSEEE+EK
Sbjct: 54 TLSEEEVEK 62


>sp|CAS5C_SACS2|CRISPR-ASSOCIATED protein Cas5 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ALSEEELEK 9
++S+EELEK
Sbjct: 127 SMSKEELEK 135


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ALSEEELEK 9
ALSEE+L+K
Sbjct: 210 ALSEEDLDK 218


>sp|SRP54_METTH|SIGNAL recognition particle 54 kDa|Methanothermobacter thermautotrophicus

Query: 1 ALSEEELEK 9
+++EEELEK
Sbjct: 376 SMTEEELEK 384


>sp|CAS5A_SACS2|CRISPR system aCascade subunit Cas5|Saccharolobus solfataricus (strain

Query: 1 ALSEEELEK 9
++S+EELEK
Sbjct: 127 SISKEELEK 135


>sp|AROC_HALMA|CHORISMATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LSEEELEK 9
LSEEE++K
Sbjct: 36 LSEEEIQK 43


>sp|GATE_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 2 LSEEELEK 9
LSEEE+EK
Sbjct: 568 LSEEEVEK 575


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LSEEELEKK 10
+S+EELE++
Sbjct: 517 VSDEELERR 525


>sp|MDH_ARCFU|MALATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LSEEELEK 9
LS+EE+EK
Sbjct: 270 LSDEEIEK 277




249|Sequence|1241|1250|ELEKKSKAII

>sp|Y22B_METJA|UNCHARACTERIZED protein MJ0226.2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELEKKSKAII 10
+LE+K+K II
Sbjct: 35 KLERKNKEII 44


>sp|EF1B_THEKO|ELONGATION factor 1-beta|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ELEKKSKAII 10
ELE+K KA+I
Sbjct: 23 ELEEKLKAVI 32


>sp|EF1B_PYRAB|ELONGATION factor 1-beta|Pyrococcus abyssi (strain GE5 /

Query: 1 ELEKKSKAII 10
ELE+K KA+I
Sbjct: 23 ELEEKLKAVI 32


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ELEKKSKAI 9
+LEK+S+AI
Sbjct: 257 DLEKRSEAI 265


>sp|EF1B_PYRFU|ELONGATION factor 1-beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELEKKSKAII 10
ELE+K KA+I
Sbjct: 23 ELEEKLKALI 32


>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 2 LEKKSKAI 9
LEKK KAI
Sbjct: 303 LEKKMKAI 310




250|Sequence|1246|1255|SKAIIEEYLH

>sp|Y1624_METJA|UPF0292 protein MJ1624|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SKAIIEEYLH 10
+KAIIEE+ H
Sbjct: 83 AKAIIEEFRH 92


>sp|RS3_METTP|SMALL ribosomal subunit protein uS3|Methanothrix thermoacetophila

Query: 1 SKAIIEEYL 9
+KA+++EYL
Sbjct: 13 TKALVDEYL 21


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KAIIEEY 8
KA+IEEY
Sbjct: 99 KAVIEEY 105


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KAIIEEYL 9
KA++EEY+
Sbjct: 99 KAVMEEYM 106


>sp|PURP_METMP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain DSM

Query: 1 SKAIIEEYL 9
SKA IEEY+
Sbjct: 194 SKAHIEEYV 202


>sp|FRHB_METVO|COENZYME F420 hydrogenase subunit beta|Methanococcus voltae

Query: 2 KAIIEEY 8
KAI+EEY
Sbjct: 142 KAIVEEY 148


>sp|THI4_METBU|THIAMINE thiazole synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SKAIIEEY 8
S+AIIEE+
Sbjct: 9 SRAIIEEF 16


>sp|G1PDH_THEPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermofilum pendens (strain DSM 2475

Query: 3 AIIEEYLH 10
AII YLH
Sbjct: 270 AIIASYLH 277


>sp|THI4_METTP|THIAMINE thiazole synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SKAIIEEYL 9
++AI+E YL
Sbjct: 9 TRAIVESYL 17


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KAIIEEYL 9
K +IEEY+
Sbjct: 99 KTVIEEYM 106


>sp|HEM3_SULTO|PROBABLE porphobilinogen deaminase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KAIIEEYLH 10
K IEEY H
Sbjct: 260 KITIEEYFH 268


>sp|THI4_PYRAB|THIAMINE thiazole synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 SKAIIEEY 8
S+AIIE Y
Sbjct: 8 SRAIIESY 15


>sp|Y745_PYRAE|PROTEIN PAE0745|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SKAIIEEYL 9
++A++E+YL
Sbjct: 17 ARAVVEKYL 25


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 2 KAIIEEY 8
K IIEEY
Sbjct: 558 KVIIEEY 564


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 4 IIEEYLH 10
+IE+YLH
Sbjct: 203 LIEKYLH 209


>sp|ILVC_PYRAE|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum aerophilum (strain ATCC

Query: 2 KAIIEEYL 9
KA+ EEYL
Sbjct: 135 KAVREEYL 142




251|Sequence|1251|1260|EEYLHLNDMK

>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EYLHLNDMK 10
EY+HLND K
Sbjct: 207 EYIHLNDSK 215


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EEYLHLNDMK 10
EE+ HL+D+K
Sbjct: 272 EEFPHLDDLK 281


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 1 EEYLHLNDMK 10
EE+ HL+D+K
Sbjct: 271 EEFPHLDDIK 280


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 1 EEYLHLNDMK 10
EE+ HL+D+K
Sbjct: 271 EEFPHLDDIK 280


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 EEYLHLNDMK 10
EE+ HL+D+K
Sbjct: 271 EEFPHLDDIK 280


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 EEYLHLNDMK 10
EE+ HL+D+K
Sbjct: 271 EEFPHLDDIK 280


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 EEYLHLNDMK 10
EE+ HL+D+K
Sbjct: 271 EEFPHLDDIK 280


>sp|PURQ_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Picrophilus torridus (strain ATCC 700027

Query: 2 EYLHLNDM 9
EY+H+ND+
Sbjct: 32 EYVHINDL 39


>sp|Y1497_METJA|UNCHARACTERIZED metallohydrolase MJ1497|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EEYLHLNDM 9
EEYL+LND
Sbjct: 322 EEYLNLNDF 330


>sp|END4_METLZ|PROBABLE endonuclease 4|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 LHLNDMK 10
+HLNDMK
Sbjct: 214 IHLNDMK 220


>sp|END4_HALSA|PROBABLE endonuclease 4|Halobacterium salinarum (strain ATCC 700922

Query: 2 EYLHLNDMK 10
+Y+HLND K
Sbjct: 206 QYVHLNDSK 214


>sp|END4_HALS3|PROBABLE endonuclease 4|Halobacterium salinarum (strain ATCC 29341

Query: 2 EYLHLNDMK 10
+Y+HLND K
Sbjct: 206 QYVHLNDSK 214


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 EYLHLNDM 9
EY ++NDM
Sbjct: 43 EYFYINDM 50


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 1 EEYLHLND 8
EEY+H+ D
Sbjct: 438 EEYMHVYD 445


>sp|END4_CENSY|PROBABLE endonuclease 4|Cenarchaeum symbiosum (strain A)

Query: 4 LHLNDMK 10
LHLND K
Sbjct: 213 LHLNDAK 219


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EEYLHLNDMK 10
EE+ HL D++
Sbjct: 273 EEFPHLEDIR 282


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 EEYLHLNDM 9
E LHL DM
Sbjct: 408 ERILHLGDM 416


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YLHLND 8
+LHLND
Sbjct: 184 WLHLND 189


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 1 EEYLHLNDMK 10
E LHL DMK
Sbjct: 264 EGTLHLEDMK 273


>sp|Y1942_ARCFU|UNCHARACTERIZED protein AF_1942|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YLHLND 8
YLH ND
Sbjct: 62 YLHTND 67


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 4 LHLNDMK 10
LHLND K
Sbjct: 213 LHLNDAK 219


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 4 LHLNDMK 10
LHL DMK
Sbjct: 267 LHLKDMK 273


>sp|YPZ11_METTF|UNCHARACTERIZED protein ORF11'|Methanothermobacter thermautotrophicus

Query: 3 YLHLND 8
Y+HLND
Sbjct: 65 YMHLND 70


>sp|END4_METPE|PROBABLE endonuclease 4|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 LHLNDMK 10
+HLND K
Sbjct: 216 IHLNDAK 222


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 4 LHLNDMK 10
LHL DMK
Sbjct: 267 LHLEDMK 273


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 4 LHLNDMK 10
LHL DMK
Sbjct: 267 LHLEDMK 273


>sp|DCD_SACS2|DCTP deaminase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EEYLHLND 8
EEY+ LN+
Sbjct: 81 EEYIELNN 88


>sp|PURQ_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EYLHLNDM 9
+++H+ND+
Sbjct: 33 DFIHINDL 40


>sp|HIS4_METJA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocaldococcus jannaschii

Query: 2 EYLHLNDM 9
EYLH+ D+
Sbjct: 45 EYLHIIDL 52


>sp|SFSA_PYRAE|SUGAR fermentation stimulation protein homolog|Pyrobaculum aerophilum

Query: 1 EEYLHLND 8
E Y+H++D
Sbjct: 37 ESYVHIHD 44




252|Sequence|1256|1265|LNDMKEAVQC

>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 LNDMKEAVQC 10
ND+K++V C
Sbjct: 1095 FNDIKDSVSC 1104


>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 3 DMKEAVQ 9
D+KEAVQ
Sbjct: 94 DLKEAVQ 100


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 NDMKEA 7
NDMKEA
Sbjct: 623 NDMKEA 628


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 LNDMKEAVQ 9
L ++KEAVQ
Sbjct: 136 LEELKEAVQ 144


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 LNDMKEAVQ 9
L ++KEAVQ
Sbjct: 136 LEELKEAVQ 144


>sp|TSR3_SACI3|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus (strain

Query: 1 LNDMKEAVQ 9
L++MKEA++
Sbjct: 114 LDEMKEAIK 122


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 DMKEAVQC 10
DM EA++C
Sbjct: 347 DMPEAMKC 354




253|Sequence|1261|1270|EAVQCVQELA

>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 EAVQCVQELA 10
EAV+C+ EL
Sbjct: 32 EAVECLVELG 41


>sp|AATF_METJA|A-TYPE ATP synthase subunit F|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EAVQCVQELA 10
EAV+ + ELA
Sbjct: 31 EAVKAINELA 40




254|Sequence|1266|1275|VQELASPSLL

>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 1 VQELASPSLL 10
V+EL +P LL
Sbjct: 378 VEELKNPELL 387




255|Sequence|1271|1280|SPSLLFIFVR

>sp|MAP2_PYRHO|METHIONINE aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PSLLFIFVR 10
P+L++++VR
Sbjct: 202 PTLIYMYVR 210


>sp|MAP2_PYRFU|METHIONINE aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PSLLFIFVR 10
P+L++++VR
Sbjct: 202 PTLIYMYVR 210


>sp|MAP2_PYRAB|METHIONINE aminopeptidase|Pyrococcus abyssi (strain GE5 /

Query: 2 PSLLFIFVR 10
P+L++++VR
Sbjct: 202 PTLIYMYVR 210




256|Sequence|1276|1285|FIFVRHGVES

>sp|PANB_SULAC|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 IFVRHGVES 10
+FVRHG +S
Sbjct: 104 LFVRHGADS 112


>sp|Y906_METJA|UNCHARACTERIZED protein MJ0906|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FVRHGVE 9
F++HGVE
Sbjct: 67 FIKHGVE 73


>sp|ARGB_METLZ|ACETYLGLUTAMATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 VRHGVE 9
VRHGVE
Sbjct: 256 VRHGVE 261


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 2 IFVRHGVES 10
I V+HG+ES
Sbjct: 252 ITVKHGMES 260


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 2 IFVRHGVE 9
IFVR GV+
Sbjct: 102 IFVRRGVK 109


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 3 FVRHGVE 9
F RHG+E
Sbjct: 402 FFRHGLE 408


>sp|HIS1_THEKO|ATP phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 IFVRHGVE 9
++V HGVE
Sbjct: 50 VYVEHGVE 57


>sp|RISB_THEGJ|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 FVRHGVE 9
F RHGVE
Sbjct: 40 FERHGVE 46


>sp|RISB_PYRFU|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FVRHGVE 9
F RHGVE
Sbjct: 40 FKRHGVE 46


>sp|RISB_THEON|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Thermococcus onnurineus (strain NA1)

Query: 3 FVRHGVE 9
F RHGVE
Sbjct: 40 FERHGVE 46




257|Sequence|1281|1290|HGVESTLERS

>sp|TMBL1_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 1 HGVESTLERS 10
HG E+T++R+
Sbjct: 117 HGFENTIDRA 126


>sp|PSB1_HALTV|PROTEASOME subunit beta 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 HGVESTLER 9
HG++S +ER
Sbjct: 205 HGIKSAVER 213


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GVESTLER 9
GVEST+ R
Sbjct: 155 GVESTIAR 162


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GVESTLER 9
GVEST+ R
Sbjct: 155 GVESTIAR 162


>sp|GGR_PYRHO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GVESTLER 9
GVEST+ R
Sbjct: 153 GVESTIAR 160


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 GVESTLER 9
GVEST+ R
Sbjct: 153 GVESTIAR 160


>sp|RL6_THEON|LARGE ribosomal subunit protein uL6|Thermococcus onnurineus (strain

Query: 2 GVESTLERS 10
GVE T+ER+
Sbjct: 16 GVEVTIERN 24


>sp|PGK2_METMP|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GVESTLERS 10
G+ES ++RS
Sbjct: 184 GIESIIDRS 192


>sp|PGK2_METVS|2-PHOSPHOGLYCERATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GVESTLERS 10
G+ES ++RS
Sbjct: 185 GIESIIDRS 193


>sp|PGK2_METM6|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 GVESTLERS 10
G+ES ++RS
Sbjct: 185 GIESIIDRS 193


>sp|PGK2_METM5|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 GVESTLERS 10
G+ES ++RS
Sbjct: 185 GIESIIDRS 193


>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 GVESTLERS 10
G+ES ++RS
Sbjct: 185 GIESIIDRS 193




258|Sequence|1286|1295|TLERSAIARE

***** No hits found ******


259|Sequence|1291|1300|AIAREHMGQL

>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 AREHMGQL 10
AR HMG+L
Sbjct: 481 ARSHMGRL 488


>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 AREHMGQL 10
AR H+GQ+
Sbjct: 242 ARPHLGQI 249


>sp|SUCC_HALLT|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halorubrum lacusprofundi (strain

Query: 1 AIAREHM 7
AIAREH+
Sbjct: 135 AIAREHV 141


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 AREHMGQL 10
AR H+GQ+
Sbjct: 242 ARPHLGQV 249


>sp|SUCC_HALMA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Haloarcula marismortui (strain

Query: 1 AIAREHM 7
AIAREH+
Sbjct: 135 AIAREHI 141


>sp|PIMT_PYRNV|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 EHMGQL 10
EHMGQ+
Sbjct: 175 EHMGQI 180


>sp|RLME_CENSY|RIBOSOMAL RNA large subunit methyltransferase|Cenarchaeum symbiosum (strain

Query: 4 REHMGQL 10
REHMG +
Sbjct: 162 REHMGHM 168


>sp|IDI2_METBF|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 3 AREHMGQL 10
A EH+G+L
Sbjct: 239 ASEHLGEL 246




260|Sequence|1296|1305|HMGQLLHQLL

>sp|PIMT_PYRNV|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 HMGQLLHQL 9
HMGQ+L+++
Sbjct: 176 HMGQILYKV 184


>sp|SRP54_METM5|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C5 /

Query: 1 HMGQLLHQLL 10
MGQ++ QL+
Sbjct: 438 QMGQIMRQLM 447


>sp|SRP54_METMP|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain DSM

Query: 1 HMGQLLHQLL 10
MGQ++ QL+
Sbjct: 438 QMGQIMRQLM 447


>sp|SRP54_METM6|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C6 /

Query: 1 HMGQLLHQLL 10
MGQ++ QL+
Sbjct: 438 QMGQIMRQLM 447


>sp|SRP54_METVS|SIGNAL recognition particle 54 kDa|Methanococcus vannielii (strain ATCC

Query: 2 MGQLLHQLL 10
MGQ++ QL+
Sbjct: 439 MGQIMRQLM 447


>sp|SRP54_METM7|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C7 /

Query: 1 HMGQLLHQLL 10
MGQ++ QL+
Sbjct: 438 QMGQIMRQLM 447


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 HMGQLLHQL 9
H+G+ LH++
Sbjct: 36 HVGEYLHRV 44




261|Sequence|1301|1310|LHQLLCAGHL

>sp|TRPG2_HALMA|ANTHRANILATE synthase component II|Haloarcula marismortui (strain ATCC 43049

Query: 2 HQLLCAGH 9
HQ LCA H
Sbjct: 79 HQALCAAH 86


>sp|GPMI_HALMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloarcula marismortui (strain ATCC 43049

Query: 2 HQLLCAGH 9
H L+CA H
Sbjct: 443 HALICADH 450


>sp|NUCS_METTH|ENDONUCLEASE NucS|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LHQLLCAGH 9
+H L+ AGH
Sbjct: 124 VHDLMVAGH 132




262|Sequence|1306|1315|CAGHLSTAQY

>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 1 CAGHLST 7
C GH+ST
Sbjct: 188 CPGHVST 194


>sp|COFH_METAR|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocella arvoryzae (strain DSM

Query: 1 CAGHLSTAQY 10
C G LST+++
Sbjct: 178 CPGKLSTSEW 187


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 CAGHLSTAQY 10
C GH+S Y
Sbjct: 473 CVGHVSPEAY 482


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 1 CAGHLSTAQY 10
C GH+S Y
Sbjct: 477 CIGHISPEAY 486


>sp|Y268_ARCFU|UNCHARACTERIZED protein AF_0268|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AGHLSTAQY 10
+GH+S A+Y
Sbjct: 19 SGHVSIARY 27


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 2 AGHLSTAQ 9
AGH+ TA+
Sbjct: 113 AGHIETAE 120




263|Sequence|1311|1320|STAQYYQGLY

>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 STAQYYQGLY 10
S ++YY+ LY
Sbjct: 397 SISEYYKNLY 406


>sp|SYS_CENSY|SERINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 TAQYYQGL 9
T ++YQGL
Sbjct: 302 TEEFYQGL 309


>sp|AROK_METJA|SHIKIMATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 STAQYYQGL 9
+TA YY G+
Sbjct: 140 ATASYYGGI 148


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 QYYQGL 9
+YYQGL
Sbjct: 209 EYYQGL 214


>sp|Y2248_HALVD|UNCHARACTERIZED motility-related protein HVO_2248|Haloferax volcanii (strain ATCC

Query: 2 TAQYYQGLY 10
TA Y++GL+
Sbjct: 105 TAYYFEGLW 113




264|Sequence|1316|1325|YQGLYEILEL

>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 1 YQGLYEILE 9
Y+GLYE++E
Sbjct: 222 YKGLYEVVE 230


>sp|Y739_SACI1|MEMO1 family protein YN1551_0739|Saccharolobus islandicus (strain

Query: 1 YQGLYEILE 9
Y+GLYE++E
Sbjct: 222 YKGLYEVVE 230


>sp|Y2134_SACI3|MEMO1 family protein M1627_2134|Saccharolobus islandicus (strain M.16.27)

Query: 1 YQGLYEILE 9
Y+GLYE++E
Sbjct: 222 YKGLYEVVE 230


>sp|Y2061_SACI6|MEMO1 family protein M164_2061|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YQGLYEILE 9
Y+GLYE++E
Sbjct: 222 YKGLYEVVE 230


>sp|Y2054_SACI4|MEMO1 family protein M1425_2054|Saccharolobus islandicus (strain M.14.25

Query: 1 YQGLYEILE 9
Y+GLYE++E
Sbjct: 222 YKGLYEVVE 230


>sp|Y2219_SACI2|MEMO1 family protein LS215_2219|Saccharolobus islandicus (strain L.S.2.15

Query: 1 YQGLYEILE 9
Y+GLYE++E
Sbjct: 222 YKGLYEVVE 230


>sp|Y066_SACS2|MEMO1 family protein SSO0066|Saccharolobus solfataricus (strain ATCC

Query: 1 YQGLYEILE 9
Y+GLYE++E
Sbjct: 222 YRGLYEVVE 230


>sp|Y2139_METS5|MEMO1 family protein Msed_2139|Metallosphaera sedula (strain ATCC 51363

Query: 1 YQGLYEILE 9
Y+GLY+++E
Sbjct: 220 YKGLYKVVE 228


>sp|PNPH_KORCO|PROBABLE 6-oxopurine nucleoside phosphorylase|Korarchaeum cryptofilum

Query: 3 GLYEILE 9
GLYE+LE
Sbjct: 11 GLYELLE 17


>sp|FAEHP_METST|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 QGLYEILEL 10
QG+Y IL++
Sbjct: 278 QGIYSILDM 286


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 QGLYEILEL 10
QG+Y IL++
Sbjct: 275 QGIYSILDM 283


>sp|WECB_METJA|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QGLYEILEL 10
+G++EI+E+
Sbjct: 223 EGIFEIIEI 231


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YQGLYEILEL 10
YQG EIL++
Sbjct: 311 YQGRLEILKV 320


>sp|DNAG_METVS|DNA primase DnaG|Methanococcus vannielii (strain ATCC 35089

Query: 1 YQGLYEILE 9
Y G+ EILE
Sbjct: 353 YNGVKEILE 361


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 1 YQGLYEILEL 10
++ LYE LE+
Sbjct: 572 FETLYEFLEI 581




265|Sequence|1321|1330|EILELAEDME

>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EILELAEDM 9
EI+ELA DM
Sbjct: 260 EIIELARDM 268


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EILELAED 8
E+LELAE+
Sbjct: 300 EVLELAEN 307


>sp|PYRB_IGNH4|ASPARTATE carbamoyltransferase catalytic subunit|Ignicoccus hospitalis

Query: 1 EILELAEDME 10
+I ELAED+E
Sbjct: 17 KIFELAEDIE 26


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 EILELAEDME 10
EI+E A DM+
Sbjct: 260 EIMEFARDMK 269


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EILELAEDM 9
EI+ELA+D+
Sbjct: 260 EIMELAKDL 268


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LELAEDME 10
+ELAE+ME
Sbjct: 468 VELAEEME 475


>sp|G3P_SULAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EILELAEDM 9
EI+E+A D+
Sbjct: 263 EIMEIARDL 271


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 2 ILELAEDME 10
IL LAE+ME
Sbjct: 22 ILNLAEEME 30


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 EILELAEDME 10
E +ELAED E
Sbjct: 121 ESIELAEDRE 130


>sp|PIMT_METMA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EILELAE 7
EILELAE
Sbjct: 97 EILELAE 103


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EILELAEDM 9
E+L+ AEDM
Sbjct: 312 ELLQQAEDM 320




266|Sequence|1326|1335|AEDMEIDIPH

>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EDMEIDIP 9
ED+EID+P
Sbjct: 221 EDLEIDLP 228


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 3 DMEIDIPH 10
DME DI H
Sbjct: 267 DMEFDIAH 274


>sp|PCNA_PYRFU|DNA polymerase sliding clamp|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AEDMEIDIPH 10
E+ME+D+P
Sbjct: 118 VEEMEVDLPE 127


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 1 AEDMEIDI 8
AED+E+DI
Sbjct: 315 AEDLEMDI 322


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AEDMEIDI 8
AEDME++I
Sbjct: 317 AEDMEMEI 324


>sp|AGOG_THEKO|N-GLYCOSYLASE/DNA lyase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 MEIDIP 9
MEIDIP
Sbjct: 189 MEIDIP 194


>sp|RTCB_METTH|TRNA-SPLICING ligase RtcB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AEDMEIDI 8
AEDME++I
Sbjct: 317 AEDMEMEI 324


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 EDMEIDIP 9
ED+E++IP
Sbjct: 30 EDLEVEIP 37


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 3 DMEIDIP 9
D+EI+IP
Sbjct: 447 DLEIEIP 453


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 EDMEIDIP 9
ED+++DIP
Sbjct: 30 EDIKVDIP 37


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 EDMEIDIP 9
ED +DIP
Sbjct: 133 EDFTVDIP 140


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AEDMEIDIP 9
AE++ +DIP
Sbjct: 530 AEELGVDIP 538


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 EDMEIDIP 9
ED+++DIP
Sbjct: 30 EDVDVDIP 37


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AEDMEIDIP 9
+ MEID+P
Sbjct: 458 TKGMEIDVP 466


>sp|TRPA_HALMA|TRYPTOPHAN synthase alpha chain|Haloarcula marismortui (strain ATCC 43049

Query: 2 EDMEIDIP 9
ED+++D+P
Sbjct: 80 EDLDVDVP 87




267|Sequence|1331|1340|IDIPHVWLYL

>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DIPHVWLY 9
DIPH+++Y
Sbjct: 556 DIPHLYIY 563


>sp|SYW_SACS2|TRYPTOPHAN--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IDIPHVWLY 9
ID+P WLY
Sbjct: 300 IDVPFQWLY 308


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IDIPHVWLY 9
+DIP V+LY
Sbjct: 138 LDIPAVYLY 146


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IDIPHVWLYL 10
ID+PHV Y+
Sbjct: 411 IDLPHVIRYV 420


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HVWLYL 10
HVW+YL
Sbjct: 400 HVWIYL 405


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IDIPHVWLY 9
ID+PHV Y
Sbjct: 392 IDLPHVVKY 400


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 IDIPHVWLY 9
+D+P V+LY
Sbjct: 138 LDLPAVYLY 146


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IDIPHVWLY 9
+D+P V+LY
Sbjct: 138 LDLPAVYLY 146


>sp|RS4E_METS5|SMALL ribosomal subunit protein eS4|Metallosphaera sedula (strain ATCC

Query: 1 IDIPHVWLYL 10
I IPH LYL
Sbjct: 85 IAIPHADLYL 94


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 2 DIPHVW 7
DIP +W
Sbjct: 118 DIPEIW 123


>sp|SURE2_PYRAE|5'-NUCLEOTIDASE SurE 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IDIPHVW 7
I+IP VW
Sbjct: 156 INIPSVW 162


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IDIPHVWLYL 10
ID+ WLY+
Sbjct: 301 IDVAFQWLYM 310


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 IPHVWLY 9
IP VW Y
Sbjct: 102 IPKVWRY 108


>sp|ILVC_PYRCJ|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum calidifontis (strain DSM

Query: 4 PHVW 7
PHVW
Sbjct: 87 PHVW 90


>sp|G1PDH_IGNH4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PHVW 7
PHVW
Sbjct: 43 PHVW 46


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IDIPHVWLY 9
+D+P V++Y
Sbjct: 138 LDLPAVYMY 146


>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IDIPHVWLYL 10
ID+ WLY+
Sbjct: 301 IDVSFQWLYM 310


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DIPHVWLY 9
D+P V+LY
Sbjct: 160 DLPSVFLY 167


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DIPHVWLY 9
D+P V+LY
Sbjct: 149 DLPSVFLY 156


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IDIPHVWLY 9
ID+PH+ Y
Sbjct: 417 IDLPHLIRY 425


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IDIPHVWL 8
+D P++W
Sbjct: 344 VDSPYIWF 351


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 2 DIPHVWLY 9
D+P +W Y
Sbjct: 43 DLPGMWRY 50


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IDIPHVWLY 9
+D+P +++Y
Sbjct: 136 LDLPSIYIY 144


>sp|VHOC_METMA|F420 non-reducing hydrogenase I cytochrome|Methanosarcina mazei (strain

Query: 4 PHVWLY 9
PHVW Y
Sbjct: 219 PHVWKY 224


>sp|RL2_HYPBU|LARGE ribosomal subunit protein uL2|Hyperthermus butylicus (strain DSM

Query: 4 PHVW 7
PHVW
Sbjct: 183 PHVW 186


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IDIPHVW 7
+D P VW
Sbjct: 381 VDYPEVW 387


>sp|Y436_PYRFU|KELCH domain-containing protein PF0436|Pyrococcus furiosus (strain ATCC

Query: 1 IDIPHVWL 8
+D+P +W+
Sbjct: 102 VDVPALWI 109




268|Sequence|1336|1345|VWLYLAELVT

>sp|RL18E_AERPE|LARGE ribosomal subunit protein eL18|Aeropyrum pernix (strain ATCC

Query: 1 VWLYLAELV 9
VWL +AEL+
Sbjct: 29 VWLRVAELL 37


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 WLYLAELVT 10
W Y AEL+T
Sbjct: 317 WKYHAELIT 325


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 WLYLAELVT 10
W Y AEL+T
Sbjct: 317 WKYHAELIT 325


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 WLYLAELVT 10
W Y AEL+T
Sbjct: 317 WKYHAELIT 325


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 WLYLAELVT 10
W Y AEL+T
Sbjct: 317 WKYHAELIT 325


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 WLYLAELVT 10
W Y AEL+T
Sbjct: 317 WKYHAELIT 325


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 WLYLAELVT 10
W Y AEL+T
Sbjct: 317 WKYHAELIT 325


>sp|Y1797_METTH|PROBABLE S-adenosyl-L-methionine-binding protein

Query: 2 WLYLAE 7
WL+LAE
Sbjct: 61 WLHLAE 66


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WLYLAELV 9
W+YL L+
Sbjct: 2748 WIYLGSLI 2755


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WLYLAELVT 10
W Y +EL+T
Sbjct: 317 WKYHSELIT 325




269|Sequence|1341|1350|AELVTPILQE

>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 3 LVTPILQE 10
LVTP+L+E
Sbjct: 77 LVTPVLEE 84


>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AELVTPILQE 10
E+VTP+ +E
Sbjct: 36 GEIVTPMFEE 45


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ELVTPILQE 10
ELV PI+Q+
Sbjct: 286 ELVDPIVQK 294


>sp|HEM3_METBU|PROBABLE porphobilinogen deaminase|Methanococcoides burtonii (strain DSM

Query: 1 AELVTPILQE 10
A+LVT +L+E
Sbjct: 15 ADLVTKMLEE 24




270|Sequence|1346|1355|PILQEGGVPM

>sp|PDXS_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus solfataricus

Query: 1 PILQEGGVPM 10
PI Q+GGV M
Sbjct: 56 PIFQKGGVVM 65


>sp|PDXS_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus

Query: 1 PILQEGGVPM 10
PI Q+GGV M
Sbjct: 56 PIFQKGGVVM 65


>sp|PDXS_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus

Query: 1 PILQEGGVPM 10
PI Q+GGV M
Sbjct: 56 PIFQKGGVVM 65


>sp|PDXS_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus

Query: 1 PILQEGGVPM 10
PI Q+GGV M
Sbjct: 56 PIFQKGGVVM 65


>sp|PDXS_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus

Query: 1 PILQEGGVPM 10
PI Q+GGV M
Sbjct: 56 PIFQKGGVVM 65


>sp|PDXS_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus

Query: 1 PILQEGGVPM 10
PI Q+GGV M
Sbjct: 56 PIFQKGGVVM 65


>sp|PDXS_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus

Query: 1 PILQEGGVPM 10
PI Q+GGV M
Sbjct: 56 PIFQKGGVVM 65


>sp|PDXS_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfurisphaera tokodaii

Query: 1 PILQEGGVPM 10
PI Q+GGV M
Sbjct: 34 PIFQKGGVVM 43


>sp|PDXS_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Metallosphaera sedula (strain

Query: 1 PILQEGGVPM 10
PI Q+GGV M
Sbjct: 55 PIFQKGGVVM 64


>sp|PDXS_SULAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfolobus acidocaldarius

Query: 1 PILQEGGVPM 10
PI Q+GGV M
Sbjct: 54 PIFQKGGVIM 63


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 2 ILQEGGVPM 10
IL +GG PM
Sbjct: 393 ILDDGGTPM 401


>sp|PURP_PYRIL|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 ILQEGGVP 9
+LQ GG+P
Sbjct: 121 LLQRGGIP 128


>sp|AK_METJA|PROBABLE aspartokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PILQEGGVPM 10
P+L+EG +P+
Sbjct: 180 PLLKEGIIPV 189


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ILQEGGVPM 10
IL +GGVP+
Sbjct: 138 ILNQGGVPL 146


>sp|COAD_METJA|PHOSPHOPANTETHEINE adenylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PILQEGGVPM 10
PIL E G P+
Sbjct: 120 PILAEDGKPI 129


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 2 ILQEGGVP 9
I +EGG+P
Sbjct: 540 IAKEGGIP 547


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 2 ILQEGGVP 9
I +EGG+P
Sbjct: 541 IAKEGGIP 548


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 2 ILQEGGVP 9
I +EGG+P
Sbjct: 540 IAKEGGIP 547


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LQEGGVPM 10
L EGGVP+
Sbjct: 670 LFEGGVPL 677


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LQEGGVPM 10
L EGGVP+
Sbjct: 670 LFEGGVPL 677


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LQEGGVPM 10
+QEGG P+
Sbjct: 68 IQEGGTPL 75


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 2 ILQEGGVP 9
I +EGG+P
Sbjct: 540 IAKEGGIP 547


>sp|CAS5_THETK|CRISPR-ASSOCIATED protein Cas5|Thermoproteus tenax (strain ATCC 35583

Query: 1 PILQEGGV 8
P+++EGGV
Sbjct: 193 PVVEEGGV 200


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 PILQEGGVPM 10
P Q+GG P+
Sbjct: 225 PYYQKGGTPL 234


>sp|SUCC_IGNH4|SUCCINATE--COA ligase [ADP-forming] subunit beta|Ignicoccus hospitalis (strain

Query: 2 ILQEGGVPM 10
IL+E G+P+
Sbjct: 350 ILKEAGIPL 358


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 PILQEGGVPM 10
P Q+GG P+
Sbjct: 225 PYYQKGGTPL 234


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LQEGGVPM 10
+ +GGVPM
Sbjct: 667 IYQGGVPM 674


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 LQEGGVPM 10
+ +GGVPM
Sbjct: 682 IYQGGVPM 689


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LQEGGVPM 10
+ +GGVPM
Sbjct: 680 IYQGGVPM 687


>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 2 ILQEGGVPM 10
+L+E G+P+
Sbjct: 122 LLEEAGIPI 130


>sp|PUR7_METTH|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ILQEGGVP 9
+L+E GVP
Sbjct: 62 VLEEAGVP 69


>sp|YPV8_METTF|UNCHARACTERIZED protein ORF8|Methanothermobacter thermautotrophicus

Query: 1 PILQEGGVPM 10
PI GG PM
Sbjct: 50 PIYLSGGTPM 59


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 PILQEGGVP 9
P+L++ GVP
Sbjct: 508 PVLEKLGVP 516




271|Sequence|1351|1360|GGVPMGELFR

>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GGVPMGELFR 10
GGVP G++ R
Sbjct: 694 GGVPPGKMIR 703


>sp|PUR5_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 GVPMGELFR 10
GVP+ E+FR
Sbjct: 274 GVPLDEMFR 282


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GGVPMGELFR 10
GG+P GE R
Sbjct: 706 GGIPPGETLR 715


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GGVPMGELFR 10
GG+P GE R
Sbjct: 701 GGIPAGEQIR 710


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GGVPMGELFR 10
GGVP GE R
Sbjct: 694 GGVPPGEKIR 703


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GVPMGELFR 10
GVP+ E+FR
Sbjct: 274 GVPLEEMFR 282


>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 2 GVPMGELF 9
GVP+GEL
Sbjct: 2 GVPIGELL 9


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GGVPMGELFR 10
GGVP GE R
Sbjct: 694 GGVPPGEKIR 703


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GGVPMGELFR 10
GG+P GE R
Sbjct: 702 GGIPAGEQIR 711


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GGVPMGELFR 10
GG+P GE R
Sbjct: 702 GGIPAGEQIR 711


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GVPMGELFR 10
GVP+ E+FR
Sbjct: 274 GVPLEEMFR 282


>sp|SLAB_ACIAM|S-LAYER protein B|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 GGVPMGEL 8
GVP+GEL
Sbjct: 80 AGVPVGEL 87


>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GVPMGELFR 10
GVP+ E+FR
Sbjct: 275 GVPLEEMFR 283


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GVPMGELFR 10
GVP+ E+FR
Sbjct: 275 GVPLEEMFR 283


>sp|FEN_PYRAB|FLAP endonuclease 1|Pyrococcus abyssi (strain GE5 /

Query: 2 GVPMGEL 8
GVP+GEL
Sbjct: 2 GVPIGEL 8


>sp|Y1177_METJA|PUTATIVE transport protein MJ1177|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GVPMGELF 9
GVP ELF
Sbjct: 218 GVPYAELF 225


>sp|HEM1_METHJ|GLUTAMYL-TRNA reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GVPMGELFR 10
VPM +L+R
Sbjct: 220 AVPMADLYR 228


>sp|GFCR_METVS|TRANSCRIPTIONAL regulator GfcR|Methanococcus vannielii (strain ATCC 35089

Query: 2 GVPMGELFR 10
GVP+ LFR
Sbjct: 189 GVPVHHLFR 197


>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GGVPMGELF 9
G+P+GE F
Sbjct: 62 AGLPLGEKF 70


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GVPMGELF 9
G+P+GE F
Sbjct: 64 GLPLGERF 71


>sp|PXPA_THEON|5-OXOPROLINASE subunit A|Thermococcus onnurineus (strain NA1)

Query: 3 VPMGELFR 10
VPMGE R
Sbjct: 248 VPMGEFIR 255


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 VPMGEL 8
+PMGEL
Sbjct: 114 IPMGEL 119


>sp|COME_METMP|SULFOPYRUVATE decarboxylase subunit beta|Methanococcus maripaludis (strain DSM

Query: 2 GVPMGELFR 10
G+P ELF+
Sbjct: 26 GIPSKELFK 34


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 1 GGVPMGELF 9
GGVP G+ F
Sbjct: 401 GGVPSGDDF 409


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GVPMGELFR 10
GVP E+FR
Sbjct: 31 GVPYYEIFR 39


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GGVPMGELFR 10
GGVP GE R
Sbjct: 694 GGVPPGEKIR 703


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 GVPMGELFR 10
GVP E+FR
Sbjct: 31 GVPYYEVFR 39


>sp|PUR5_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGVPMGELFR 10
G VP E+FR
Sbjct: 277 GNVPDEEMFR 286


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 GGVPMGELF 9
G VP+ E+F
Sbjct: 672 GSVPVAEMF 680


>sp|FLAH_METJA|ARCHAEAL flagellar ATP-binding protein FlaH|Methanocaldococcus jannaschii

Query: 1 GGVPMGEL 8
GG+P G L
Sbjct: 22 GGIPHGSL 29


>sp|FEN_PYRFU|FLAP endonuclease 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GVPMGEL 8
GVP+GE+
Sbjct: 2 GVPIGEI 8


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GGVPMGELF 9
GGVP+G +
Sbjct: 410 GGVPIGPVL 418


>sp|RNZ_NITMS|RIBONUCLEASE Z|Nitrosopumilus maritimus (strain SCM1)

Query: 2 GVPMGELF 9
G+P GEL+
Sbjct: 164 GIPEGELW 171


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GGVPMGELF 9
G VP+ ELF
Sbjct: 666 GRVPVAELF 674


>sp|KGSDH_HALVD|ALPHA-KETOGLUTARATE semialdehyde dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 GGVPMGE 7
GGVP GE
Sbjct: 351 GGVPEGE 357


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 1 GGVPMGEL 8
GGVP G L
Sbjct: 279 GGVPFGYL 286


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 GGVPMGEL 8
GGVP G L
Sbjct: 279 GGVPFGYL 286


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 GGVPMG 6
GGVP+G
Sbjct: 410 GGVPVG 415


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GGVPMGELFR 10
GGVPM + R
Sbjct: 683 GGVPMSKDIR 692


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GGVPMGELFR 10
GG+P G+ R
Sbjct: 697 GGIPPGQNIR 706


>sp|SODM_HALMA|SUPEROXIDE dismutase [Mn]|Haloarcula marismortui (strain ATCC 43049

Query: 1 GGVPMGELF 9
GG P GEL
Sbjct: 91 GGEPEGELL 99


>sp|FEN_PYRHO|FLAP endonuclease 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GVPMGEL 8
GVP+G+L
Sbjct: 2 GVPIGDL 8


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GGVPMG 6
GG+PMG
Sbjct: 263 GGLPMG 268


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 GGVPMGEL 8
GGVP G L
Sbjct: 282 GGVPFGVL 289


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 1 GGVPMGEL 8
GGVP G L
Sbjct: 282 GGVPFGFL 289


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GGVPMGEL 8
GG PMG +
Sbjct: 263 GGFPMGAI 270


>sp|RS6E_ARCFU|SMALL ribosomal subunit protein eS6|Archaeoglobus fulgidus (strain ATCC

Query: 1 GGVPMGELFR 10
G VP+ E+F+
Sbjct: 116 GKVPLEEIFK 125


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGVPMG 6
GGVP+G
Sbjct: 256 GGVPIG 261


>sp|RNZ_CENSY|RIBONUCLEASE Z|Cenarchaeum symbiosum (strain A)

Query: 2 GVPMGELF 9
GVP GEL+
Sbjct: 164 GVPEGELW 171


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GGVPMGELFR 10
GGVP G R
Sbjct: 694 GGVPPGSRIR 703


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GGVPMGEL 8
GG PMG +
Sbjct: 263 GGFPMGAI 270


>sp|YPV8_METTF|UNCHARACTERIZED protein ORF8|Methanothermobacter thermautotrophicus

Query: 1 GGVPMG 6
GG PMG
Sbjct: 55 GGTPMG 60


>sp|GLNB1_METTL|NITROGEN fixation nifHD region GlnB-like|Methanothermococcus

Query: 1 GGVPMGELF 9
GG+ +GE+F
Sbjct: 40 GGLKVGEIF 48




272|Sequence|1356|1365|GELFREITKP

>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 1 GELFREITK 9
ELFRE+TK
Sbjct: 2 AELFREVTK 10


>sp|KCY_METMJ|CYTIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GELFREITK 9
GE+FR++ K
Sbjct: 32 GEVFRQLAK 40


>sp|IDI2_NATPD|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GELFREITKP 10
GELFRE P
Sbjct: 248 GELFREWGVP 257


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM

Query: 1 GELFREITK 9
ELF+E+TK
Sbjct: 2 SELFKEMTK 10


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GELFREITKP 10
E FRE+T+P
Sbjct: 992 SEEFRELTEP 1001


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 GELFREITK 9
GEL REI K
Sbjct: 869 GELMREIGK 877


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 1 GELFREITK 9
GEL REI K
Sbjct: 104 GELAREIAK 112


>sp|G1PDH_NITMS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GELFREITKP 10
GE +TKP
Sbjct: 30 GEFLHNLTKP 39


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GELFREITK 9
G+LFR I K
Sbjct: 106 GDLFRNIRK 114


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 FREITKP 10
FRE+T+P
Sbjct: 995 FRELTEP 1001


>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 1 GELFREITK 9
G+L REITK
Sbjct: 268 GKLEREITK 276


>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GELFREITK 9
G+L REITK
Sbjct: 233 GKLEREITK 241


>sp|Y002_METJA|UNCHARACTERIZED protein MJ0002|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GELFREITKP 10
G+ RE+ KP
Sbjct: 69 GKFLRELLKP 78


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GELFREIT 8
GEL +EIT
Sbjct: 723 GELIKEIT 730


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GELFREITKP 10
G+L+R T P
Sbjct: 199 GDLYRRSTNP 208


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 ELFREITK 9
++FREIT+
Sbjct: 266 QMFREITE 273


>sp|GFCR_ARCFU|TRANSCRIPTIONAL regulator GfcR|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 FREITKP 10
+RE+TKP
Sbjct: 54 WRELTKP 60


>sp|KCY_METAC|CYTIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GELFREITK 9
GE+FR + K
Sbjct: 32 GEIFRRMAK 40


>sp|RNZ_METJA|RIBONUCLEASE Z|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LFREITKP 10
+F+EI KP
Sbjct: 151 IFKEIKKP 158


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GELFREITKP 10
G+ RE+ KP
Sbjct: 311 GKWLREVVKP 320




273|Sequence|1361|1370|EITKPLRPLG

>sp|DGGGP_METVS|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ITKPLRPL 9
I KP RP+
Sbjct: 68 INKPFRPI 75


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 4 KPLRPLG 10
KPLRP+G
Sbjct: 261 KPLRPIG 267


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 ITKPLRPL 9
IT+P++PL
Sbjct: 119 ITRPMQPL 126


>sp|DGGGP_SULTO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EITKPLRPL 9
+I KP RPL
Sbjct: 66 KINKPNRPL 74


>sp|DGGGP_META3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EITKPLRPL 9
+I KP RPL
Sbjct: 69 KINKPNRPL 77


>sp|DGGGP_SACS2|DIGERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EITKPLRPL 9
+I KP RP+
Sbjct: 66 KINKPYRPI 74


>sp|DGGGP_HALWD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EITKPLRPL 9
+I +P+RP+
Sbjct: 72 KINRPMRPI 80


>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 1 EITKPLR 7
E+TKP+R
Sbjct: 199 ELTKPMR 205


>sp|DGGGP_SULAC|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EITKPLRPL 9
+I KP RPL
Sbjct: 65 KINKPERPL 73


>sp|DGGGP_METJA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ITKPLRPL 9
I KP RPL
Sbjct: 72 INKPSRPL 79


>sp|DNLI_THEON|DNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 EITKPLRPL 9
+I KP+RP+
Sbjct: 220 QIGKPIRPM 228


>sp|RS3_METS5|SMALL ribosomal subunit protein uS3|Metallosphaera sedula (strain ATCC

Query: 2 ITKPLRPL 9
ITKPLR +
Sbjct: 183 ITKPLRTI 190


>sp|DNLI_THEKO|DNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EITKPLRPL 9
+I KP+RP+
Sbjct: 217 QIGKPIRPM 225


>sp|Y1940_AERPE|UNCHARACTERIZED protein APE_1940.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 ITKPLRPLG 10
I +PL PLG
Sbjct: 166 IHEPLAPLG 174


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 1 EITKPLRPLG 10
EITK L P+G
Sbjct: 168 EITKLLTPIG 177


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KPLRPL 9
KP+RPL
Sbjct: 288 KPMRPL 293


>sp|Y1864_ARCFU|UNCHARACTERIZED protein AF_1864|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EITKPLRP 8
EI KP++P
Sbjct: 17 EIEKPIKP 24


>sp|DGGGP_THEPD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermofilum pendens (strain DSM 2475

Query: 2 ITKPLRPL 9
I+KP RPL
Sbjct: 75 ISKPWRPL 82


>sp|Y3531_METJA|PUTATIVE antitoxin MJECL31|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ITKPLRPL 9
+ KPL+PL
Sbjct: 13 VLKPLKPL 20


>sp|DNLI_THEFM|DNA ligase|Thermococcus fumicolans

Query: 1 EITKPLRPL 9
++ KP+RP+
Sbjct: 217 QVGKPVRPM 225




274|Sequence|1366|1375|LRPLGKAASL

>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RPLGKAAS 9
+PLGKA S
Sbjct: 1256 KPLGKAKS 1263


>sp|KORC_METTM|2-OXOGLUTARATE synthase subunit KorC|Methanothermobacter marburgensis (strain

Query: 4 LGKAASL 10
LGKAASL
Sbjct: 22 LGKAASL 28


>sp|KORC_METTH|2-OXOGLUTARATE synthase subunit KorC|Methanothermobacter thermautotrophicus

Query: 4 LGKAASL 10
LGKAASL
Sbjct: 25 LGKAASL 31




275|Sequence|1371|1380|KAASLLLEIL

>sp|Y935_METJA|UNCHARACTERIZED protein MJ0935|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KAASLLLEIL 10
KA SLLLEIL
Sbjct: 115 KAISLLLEIL 124


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 KAASLLLEI 9
KAA +LLE+
Sbjct: 182 KAAKILLEL 190




276|Sequence|1376|1385|LLEILGLLCK

***** No hits found ******


277|Sequence|1381|1390|GLLCKSMGPK

>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 1 GLLCKSMGP 9
G++CKS+GP
Sbjct: 415 GVMCKSIGP 423


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii

Query: 1 GLLCKSMG 8
GL+CK+ G
Sbjct: 59 GLVCKTCG 66


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LCKSMGPK 10
+C+SMG K
Sbjct: 625 MCRSMGAK 632


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GLLCKS 6
GL+CKS
Sbjct: 401 GLICKS 406


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLLCKS 6
GL+CKS
Sbjct: 401 GLICKS 406


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GLLCKS 6
GL+CKS
Sbjct: 401 GLICKS 406


>sp|TBP_METVS|TATA-BOX-BINDING protein|Methanococcus vannielii (strain ATCC 35089

Query: 1 GLLCKSMGPK 10
GL+C+ PK
Sbjct: 41 GLVCRLSDPK 50


>sp|TBP_METTL|TATA-BOX-BINDING protein|Methanothermococcus thermolithotrophicus

Query: 1 GLLCKSMGPK 10
GL+C+ PK
Sbjct: 41 GLVCRLSDPK 50


>sp|TBP_METM7|TATA-BOX-BINDING protein|Methanococcus maripaludis (strain C7 /

Query: 1 GLLCKSMGPK 10
GL+C+ PK
Sbjct: 41 GLVCRLSDPK 50


>sp|TBP_META3|TATA-BOX-BINDING protein|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GLLCKSMGPK 10
GL+C+ PK
Sbjct: 41 GLVCRLSDPK 50




278|Sequence|1386|1395|SMGPKKVGTL

>sp|Y1691_METM7|UPF0305 protein MmarC7_1691|Methanococcus maripaludis (strain C7 /

Query: 1 SMGPKKVG 8
SMG KK+G
Sbjct: 86 SMGSKKMG 93


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GPKKVGTL 10
GP KVG L
Sbjct: 298 GPPKVGAL 305




279|Sequence|1391|1400|KVGTLWREAG

>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KVGTLWREAG 10
K+ TLW +AG
Sbjct: 750 KLFTLWNQAG 759


>sp|IDI2_HALSA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KVGTLWREAG 10
++GTL+RE G
Sbjct: 246 QIGTLFREWG 255


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 3 GTLWRE 8
GT WRE
Sbjct: 299 GTFWRE 304


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VGTLWREAG 10
V T W EAG
Sbjct: 41 VATAWSEAG 49


>sp|RL32_METVS|LARGE ribosomal subunit protein eL32|Methanococcus vannielii (strain

Query: 1 KVGTLWR 7
++GT+WR
Sbjct: 31 RIGTMWR 37


>sp|RL32_METVA|LARGE ribosomal subunit protein eL32|Methanococcus vannielii

Query: 1 KVGTLWR 7
++GT+WR
Sbjct: 31 RIGTMWR 37


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain

Query: 1 KVGTLW 6
K+GT+W
Sbjct: 6 KIGTMW 11


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 1 KVGTLW 6
K+GT+W
Sbjct: 6 KIGTMW 11


>sp|MTAA_METBF|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri (strain Fusaro /

Query: 1 KVGTLWREA 9
KVG W EA
Sbjct: 38 KVGAAWPEA 46


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 TLWREAG 10
TLW +AG
Sbjct: 771 TLWSQAG 777


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 4 TLWREAG 10
T+W++AG
Sbjct: 197 TMWKKAG 203


>sp|Y1266_PYRAB|UPF0251 protein PYRAB12660|Pyrococcus abyssi (strain GE5 /

Query: 3 GTLWR 7
GTLWR
Sbjct: 73 GTLWR 77


>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GTLWREA 9
GT+W++A
Sbjct: 473 GTIWKKA 479


>sp|LEUC_NATPD|3-ISOPROPYLMALATE dehydratase large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KVGTLWREAG 10
+ G WREAG
Sbjct: 398 EAGFDWREAG 407


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 5 LWREAG 10
LWRE G
Sbjct: 529 LWREGG 534


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 KVGTLWREAG 10
+ G WREAG
Sbjct: 398 EAGFEWREAG 407


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KVGTLWREAG 10
KVG W E G
Sbjct: 870 KVGESWNELG 879


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VGTLWREAG 10
+ T W EAG
Sbjct: 40 IATAWSEAG 48


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VGTLWREAG 10
+ T W EAG
Sbjct: 40 IATAWSEAG 48


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 VGTLWREAG 10
+ T W EAG
Sbjct: 40 IATAWSEAG 48


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VGTLWREAG 10
+ T W EAG
Sbjct: 40 IATAWSEAG 48


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VGTLWREAG 10
+ T W EAG
Sbjct: 40 IATAWSEAG 48


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 VGTLWREAG 10
+ T W EAG
Sbjct: 40 IATAWSEAG 48


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VGTLWREAG 10
+ T W EAG
Sbjct: 40 IATAWSEAG 48


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VGTLWR 7
VGT WR
Sbjct: 340 VGTCWR 345




280|Sequence|1396|1405|WREAGLSWKE

>sp|LEUC_NATPD|3-ISOPROPYLMALATE dehydratase large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WREAGLSWKE 10
++EAG W+E
Sbjct: 396 FKEAGFDWRE 405


>sp|ILVC_METST|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 2 REAGLSWKE 10
RE G SWK+
Sbjct: 47 REGGKSWKK 55


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 REAGLSWKE 10
RE G+SWKE
Sbjct: 79 RELGVSWKE 87


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 WREAGLSWKE 10
++EAG W+E
Sbjct: 396 FKEAGFEWRE 405


>sp|LEUC_HALLT|3-ISOPROPYLMALATE dehydratase large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 3 EAGLSWKE 10
EAG W+E
Sbjct: 398 EAGFDWRE 405


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 REAGLSW 8
REAG+ W
Sbjct: 534 REAGMDW 540


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 REAGLSW 8
REAG+ W
Sbjct: 536 REAGMDW 542


>sp|LYSZ_PYRFU|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrococcus furiosus

Query: 1 WREAGLS 7
WRE G+S
Sbjct: 18 WRENGIS 24


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 REAGLSW 8
REAG+ W
Sbjct: 539 REAGMDW 545


>sp|FEN_METPE|FLAP endonuclease 1|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 REAGLSWK 9
REAG+ W+
Sbjct: 100 REAGVQWE 107


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 GLSWKE 10
GLSWK+
Sbjct: 186 GLSWKD 191


>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain

Query: 1 WREAGLSWK 9
W E+G WK
Sbjct: 69 WEESGGGWK 77


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WREAGLSWK 9
W +A SWK
Sbjct: 629 WEDAKFSWK 637


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WREAGLSWK 9
W +A SWK
Sbjct: 567 WEDAKFSWK 575


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WREAGLSWK 9
W +A SWK
Sbjct: 627 WEDAKFSWK 635


>sp|GYAR_PYRFU|GLYOXYLATE reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WREAGLSW 8
W+ G++W
Sbjct: 131 WKRKGIAW 138


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 GLSWKE 10
GLSWK+
Sbjct: 428 GLSWKK 433


>sp|Y1267_ARCFU|UNCHARACTERIZED protein AF_1267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 REAGLSWKE 10
RE G+ WK
Sbjct: 26 RECGIIWKN 34


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 REAGLSWKE 10
RE G+ W++
Sbjct: 268 RETGIKWED 276


>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WREAGLSWKE 10
W + +WKE
Sbjct: 357 WEDRHRAWKE 366


>sp|GYAR_THEON|GLYOXYLATE reductase|Thermococcus onnurineus (strain NA1)

Query: 1 WREAGLSW 8
W++ G++W
Sbjct: 131 WKKRGVAW 138


>sp|TRMY_ARCFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Archaeoglobus fulgidus

Query: 3 EAGLSWKE 10
E G SWK+
Sbjct: 186 ECGKSWKK 193




281|Sequence|1401|1410|LSWKEFLPEG

>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 WKEFLPEG 10
W+++LP+G
Sbjct: 424 WEQYLPDG 431


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 2 SWKEFLP 8
SW EF+P
Sbjct: 39 SWTEFIP 45


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 4 KEFLPEG 10
+EF+PEG
Sbjct: 537 REFMPEG 543


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 4 KEFLPEG 10
+EF+PEG
Sbjct: 537 REFMPEG 543


>sp|AROB_PYRIL|3-DEHYDROQUINATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LSWKEFLPE 9
LSW E LPE
Sbjct: 148 LSWLETLPE 156


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 3 WKEFLPEG 10
W ++LP+G
Sbjct: 429 WMQYLPDG 436


>sp|BIOB_CENSY|BIOTIN synthase|Cenarchaeum symbiosum (strain A)

Query: 2 SWKEFLPEG 10
+W+E PEG
Sbjct: 109 AWREPTPEG 117


>sp|AGOG_PYRAB|N-GLYCOSYLASE/DNA lyase|Pyrococcus abyssi (strain GE5 /

Query: 1 LSWKEFLPEG 10
L++KEFLP
Sbjct: 79 LAYKEFLPNS 88


>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SWKEFLPE 9
SW+E PE
Sbjct: 129 SWEEITPE 136


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LSWKEFLPE 9
L WK LPE
Sbjct: 325 LEWKGLLPE 333


>sp|MAP2_THEKO|METHIONINE aminopeptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KEFLPEG 10
++FLPEG
Sbjct: 242 QDFLPEG 248


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 LSWKEFLPEG 10
+ WK+F EG
Sbjct: 200 IEWKDFTDEG 209


>sp|LYSK_SULAC|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LSWKEFLPE 9
L K+FLPE
Sbjct: 10 LKIKQFLPE 18


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 LSWKEF 6
L WKEF
Sbjct: 209 LGWKEF 214


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 LSWKEF 6
L WKEF
Sbjct: 209 LGWKEF 214


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 LSWKEF 6
L WKEF
Sbjct: 211 LGWKEF 216


>sp|Y21B_METJA|UNCHARACTERIZED protein MJ0210.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SWKEF 6
SWKEF
Sbjct: 130 SWKEF 134


>sp|PTH_SACS2|PEPTIDYL-TRNA hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LSWKEFLPE 9
L WKE+L E
Sbjct: 40 LRWKEWLNE 48


>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 EFLPEG 10
EF+PEG
Sbjct: 117 EFVPEG 122


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 4 KEFLPEG 10
+EF+P+G
Sbjct: 538 REFMPDG 544


>sp|AGL11_HALVD|LOW-SALT glycan biosynthesis nucleotidyltransferase Agl11|Haloferax volcanii

Query: 2 SWKEFLPEG 10
S +FLPEG
Sbjct: 336 SADDFLPEG 344


>sp|TSR3_METKA|16S rRNA aminocarboxypropyltransferase|Methanopyrus kandleri (strain

Query: 4 KEFLPEG 10
+EFLP+G
Sbjct: 162 EEFLPDG 168


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 LSWKEF 6
L WKEF
Sbjct: 208 LGWKEF 213


>sp|CSG_METSC|CELL surface glycoprotein|Methanothermus sociabilis

Query: 1 LSWKEFLPEG 10
+ W + +PEG
Sbjct: 421 VRWDKIVPEG 430


>sp|CSG_METFV|CELL surface glycoprotein|Methanothermus fervidus (strain ATCC 43054

Query: 1 LSWKEFLPEG 10
+ W + +PEG
Sbjct: 421 VRWDKIVPEG 430


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 SWKEFLPE 9
SW++ LPE
Sbjct: 540 SWEKELPE 547


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LSWKEF 6
SWKEF
Sbjct: 366 FSWKEF 371


>sp|PORD_PYRAB|PYRUVATE synthase subunit PorD|Pyrococcus abyssi (strain GE5 /

Query: 2 SWKEFLPE 9
SW+ F PE
Sbjct: 40 SWRVFRPE 47


>sp|PORD_PYRFU|PYRUVATE synthase subunit PorD|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SWKEFLPE 9
SW+ F PE
Sbjct: 40 SWRVFKPE 47


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 5 EFLPEG 10
EF+PEG
Sbjct: 71 EFIPEG 76


>sp|NADM_METVS|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 3 WKEFLPE 9
W+ F+PE
Sbjct: 139 WEHFVPE 145


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 2 SWKEFL 7
+WKEFL
Sbjct: 198 NWKEFL 203


>sp|PORD_PYRHO|PYRUVATE synthase subunit PorD|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SWKEFLPE 9
SW+ F PE
Sbjct: 40 SWRVFKPE 47


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 KEFLPEG 10
KEFLP G
Sbjct: 527 KEFLPAG 533


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSWKEFLPEG 10
++W +LP+G
Sbjct: 248 ITWLGYLPDG 257


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LSWKEFLPE 9
L WK LPE
Sbjct: 327 LEWKGLLPE 335


>sp|NADM_META3|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 WKEFLPEG 10
WK +P G
Sbjct: 139 WKHLIPNG 146


>sp|NADM_METLZ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 SWKEFLPE 9
+W+E++P+
Sbjct: 139 AWEEYVPK 146


>sp|AGOG_PYRHO|N-GLYCOSYLASE/DNA lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SWKEFLPEG 10
++KEFLP
Sbjct: 80 AYKEFLPNS 88


>sp|PSTS_METJA|PHOSPHATE-BINDING protein PstS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WKEFLPEG 10
WK+FL G
Sbjct: 115 WKKFLSTG 122


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 SWKEFLPEG 10
++KE LPEG
Sbjct: 940 NFKETLPEG 948


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SWKEFLPEG 10
++KE LPEG
Sbjct: 940 NFKETLPEG 948


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SWKEFLPEG 10
++KE LPEG
Sbjct: 940 NFKETLPEG 948




282|Sequence|1406|1415|FLPEGQDIGA

>sp|MAP2_THEKO|METHIONINE aminopeptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FLPEGQ 6
FLPEGQ
Sbjct: 244 FLPEGQ 249


>sp|IXTPA_THEAC|DITP/XTP pyrophosphatase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FLPEGQD 7
F+PEG D
Sbjct: 145 FIPEGSD 151


>sp|SOR_PYRFU|SUPEROXIDE reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FLPEGQD 7
FLPEG++
Sbjct: 56 FLPEGEN 62


>sp|IXTPA_METKA|DITP/XTP pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 FLPEGQD 7
F+PEG+D
Sbjct: 147 FIPEGED 153


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PEGQDI 8
P+GQDI
Sbjct: 502 PQGQDI 507


>sp|MAP2_THEON|METHIONINE aminopeptidase|Thermococcus onnurineus (strain NA1)

Query: 1 FLPEGQ 6
F+PEGQ
Sbjct: 244 FMPEGQ 249


>sp|HIS5_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii

Query: 1 FLPEGQD 7
FLPEG +
Sbjct: 31 FLPEGDE 37


>sp|RL7A_CENSY|LARGE ribosomal subunit protein eL8|Cenarchaeum symbiosum (strain A)

Query: 1 FLPEGQDIG 9
F+P QD+G
Sbjct: 79 FVPSKQDLG 87


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PEGQDIGA 10
PEGQ+I +
Sbjct: 379 PEGQEIAS 386


>sp|EF1B_NITMS|ELONGATION factor 1-beta|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LPEGQDI 8
LPEG D+
Sbjct: 11 LPEGTDV 17




283|Sequence|1411|1420|QDIGAFVAEQ

>sp|Y094_METJA|UNCHARACTERIZED protein MJ0094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QDIGAFVAEQ 10
+DIG FV ++
Sbjct: 26 EDIGGFVIQE 35


>sp|KPRS_METS3|RIBOSE-PHOSPHATE pyrophosphokinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 QDIGAFVAEQ 10
QD+ A VAE+
Sbjct: 9 QDLAAHVAEE 18




284|Sequence|1416|1425|FVAEQKVEYT

>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM 6242

Query: 1 FVAEQKVE 8
F+AE+K+E
Sbjct: 325 FIAERKME 332


>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 1 FVAEQKVEYT 10
FV+ ++EYT
Sbjct: 37 FVSGDQIEYT 46


>sp|AATE_DESSY|A-TYPE ATP synthase subunit E|Desulfurococcus sp. (strain SY)

Query: 3 AEQKVEY 9
AEQK++Y
Sbjct: 15 AEQKIQY 21




285|Sequence|1421|1430|KVEYTLGEES

>sp|NEP1_PYRAE|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum aerophilum (strain

Query: 2 VEYTLGEES 10
V Y+LGEES
Sbjct: 192 VVYSLGEES 200


>sp|RL2_METJA|LARGE ribosomal subunit protein uL2|Methanocaldococcus jannaschii

Query: 1 KVEYTLGEE 9
KVEY GEE
Sbjct: 61 KVEYETGEE 69


>sp|MTRG_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit G|Methanothermobacter marburgensis

Query: 1 KVEYTLGEES 10
KVE+T+GE S
Sbjct: 32 KVEFTVGEYS 41


>sp|MTRG_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit G|Methanothermobacter

Query: 1 KVEYTLGEES 10
KVE+T+GE S
Sbjct: 32 KVEFTVGEYS 41


>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 1 KVEYTLGEE 9
K+ +TLGEE
Sbjct: 386 KLPHTLGEE 394


>sp|RL5_CALMQ|LARGE ribosomal subunit protein uL5|Caldivirga maquilingensis (strain

Query: 2 VEYTLGEES 10
V++TL EES
Sbjct: 110 VDFTLREES 118


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 KVEYTLGEE 9
KV+Y++GE+
Sbjct: 1108 KVDYSIGEK 1116


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KVEYTLGEES 10
+++Y+LG E+
Sbjct: 329 EIDYSLGSET 338


>sp|RIB7_METTH|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Methanothermobacter thermautotrophicus

Query: 1 KVEYTLGEE 9
K YTLGE+
Sbjct: 199 KRSYTLGED 207




286|Sequence|1426|1435|LGEESEAPGQ

>sp|Y1002_PYRHO|UPF0282 protein PH1002|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GEESEAPG 9
GEE E PG
Sbjct: 290 GEEVEVPG 297




287|Sequence|1431|1440|EAPGQRALPS

>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 3 PGQRALPS 10
PG+RALPS
Sbjct: 101 PGKRALPS 108


>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 1 EAPGQRALPS 10
+ PG+RA+ S
Sbjct: 94 DGPGERAIGS 103


>sp|AATB_METB6|A-TYPE ATP synthase subunit B|Methanoregula boonei (strain DSM 21154

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 264 EVPGRRGYP 272


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 271 EVPGRRGYP 279


>sp|NADA_METB6|QUINOLINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 245 ECPGKRCFP 253


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 267 EVPGRRGYP 275


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 271 EVPGRRGYP 279


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 264 EVPGRRGYP 272


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 267 EVPGRRGYP 275


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 264 EVPGRRGYP 272


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 269 EVPGRRGYP 277


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 264 EVPGRRGYP 272


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 265 EVPGRRGYP 273


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 266 EVPGRRGYP 274


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 265 EVPGRRGYP 273


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 266 EVPGRRGYP 274


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 265 EVPGRRGYP 273


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 265 EVPGRRGYP 273


>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 270 EVPGRRGYP 278


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 269 EVPGRRGYP 277


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 267 EVPGRRGYP 275


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 267 EVPGRRGYP 275


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 269 EVPGRRGYP 277


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 267 EVPGRRGYP 275


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 271 EVPGRRGYP 279


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 264 EVPGRRGYP 272


>sp|AATB_METM7|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C7 /

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 271 EVPGRRGYP 279


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 271 EVPGRRGYP 279


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 700922

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 272 EVPGRRGYP 280


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 272 EVPGRRGYP 280


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 271 EVPGRRGYP 279


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 271 EVPGRRGYP 279


>sp|AATB_METLZ|A-TYPE ATP synthase subunit B|Methanocorpusculum labreanum (strain ATCC

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 264 EVPGRRGYP 272


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 272 EVPGRRGYP 280


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 790 EVPGRRGYP 798


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 264 EVPGRRGYP 272


>sp|AATB_METM6|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C6 /

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 271 EVPGRRGYP 279


>sp|AATB_METM5|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C5 /

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 271 EVPGRRGYP 279


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 273 EVPGRRGYP 281


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 269 EVPGRRGYP 277


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 272 EVPGRRGYP 280


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EAPGQRALP 9
E PG+R P
Sbjct: 272 EVPGRRGYP 280




288|Sequence|1436|1445|RALPSEELNR

>sp|SPEE_PYRAR|POLYAMINE aminopropyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RALPSEELNR 10
RALP+EE+++
Sbjct: 250 RALPAEEVDK 259


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LPSEELNR 10
LP EELNR
Sbjct: 443 LPKEELNR 450


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 ALPSEELNR 10
ALP+EEL +
Sbjct: 571 ALPTEELEK 579


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.16.4

Query: 2 ALPSEELNR 10
ALP+EEL +
Sbjct: 571 ALPTEELEK 579


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.14.25

Query: 2 ALPSEELNR 10
ALP+EEL +
Sbjct: 571 ALPTEELEK 579


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 ALPSEELNR 10
ALP+EEL +
Sbjct: 571 ALPTEELEK 579


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 ALPSEELNR 10
ALP+EEL +
Sbjct: 571 ALPTEELEK 579


>sp|AATC_ARCFU|A-TYPE ATP synthase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ALPSEELNR 10
LPSEE+ R
Sbjct: 329 GLPSEEIER 337


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LPSEELNR 10
LP +ELNR
Sbjct: 444 LPKDELNR 451


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LPSEELNR 10
LP EEL R
Sbjct: 442 LPEEELKR 449


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 3 LPSEELN 9
+PS+ELN
Sbjct: 17 MPSDELN 23


>sp|ACDD_METTH|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanothermobacter

Query: 2 ALPSEELN 9
ALP+EE N
Sbjct: 55 ALPAEEFN 62


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LPSEELNR 10
LP EEL R
Sbjct: 442 LPDEELKR 449


>sp|NPD_PYRHO|NAD-DEPENDENT protein deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LPSEELN 9
LPS+ELN
Sbjct: 168 LPSKELN 174


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 ALPSEELNR 10
ALP+EEL +
Sbjct: 571 ALPTEELEK 579




289|Sequence|1441|1450|EELNRQLEKL

>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EELNRQLEK 9
EELNRQLE+
Sbjct: 556 EELNRQLEE 564


>sp|TRPB1_PYRAB|TRYPTOPHAN synthase beta chain 1|Pyrococcus abyssi (strain GE5 /

Query: 1 EELNRQLE 8
EE NRQL+
Sbjct: 33 EEFNRQLD 40


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EELNRQLEKL 10
EE RQLEKL
Sbjct: 1177 EERTRQLEKL 1186


>sp|PUR8_METTH|ADENYLOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EELNRQLEKL 10
+E++RQLE+L
Sbjct: 168 DEIHRQLERL 177


>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EELNRQLEK 9
EEL R+LE+
Sbjct: 35 EELKRELER 43


>sp|GATC_METS5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Metallosphaera sedula (strain ATCC

Query: 1 EELNRQLEKL 10
EEL R+LEKL
Sbjct: 7 EELMRKLEKL 16


>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain

Query: 2 ELNRQLEKL 10
E++RQL+KL
Sbjct: 45 EISRQLDKL 53


>sp|TRPB1_PYRFU|TRYPTOPHAN synthase beta chain 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EELNRQL 7
EE NRQL
Sbjct: 33 EEFNRQL 39


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EELNRQLEK 9
EE+ R+LEK
Sbjct: 11 EEVMRELEK 19


>sp|KORB_METJA|2-OXOGLUTARATE synthase subunit KorB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EELNRQLEKL 10
EEL++ +EKL
Sbjct: 258 EELHKLIEKL 267


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 1 EELNRQLEK 9
EE+NR LEK
Sbjct: 563 EEINRLLEK 571


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EELNRQLEKL 10
EE RQLEK+
Sbjct: 1588 EERTRQLEKI 1597


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 EELNRQLEKL 10
EE RQLEK+
Sbjct: 1177 EERTRQLEKI 1186


>sp|ARGB_METMP|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ELNRQLEKL 10
E+NR +EK+
Sbjct: 66 EINRAMEKM 74


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LNRQLEKL 10
LNR++EKL
Sbjct: 270 LNREIEKL 277


>sp|ARGB_METM5|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 ELNRQLEKL 10
E+NR +EK+
Sbjct: 66 EINRAMEKM 74


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 1 EELNRQLEKL 10
EEL R+LEK+
Sbjct: 367 EELKRKLEKV 376


>sp|ARGB_METM7|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 ELNRQLEKL 10
E+NR +EK+
Sbjct: 66 EINRAMEKM 74


>sp|RS10_NANEQ|SMALL ribosomal subunit protein uS10|Nanoarchaeum equitans (strain

Query: 1 EELNRQLEKL 10
EELNR +EK+
Sbjct: 14 EELNRVVEKI 23


>sp|EF1A_PYRFU|ELONGATION factor 1-alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EELNRQLEKL 10
EE+ Q+EKL
Sbjct: 157 EEVKAQVEKL 166


>sp|ARGB_METM6|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 ELNRQLEKL 10
E+NR +EK+
Sbjct: 66 EINRAMEKM 74


>sp|EF1A_PYRWO|ELONGATION factor 1-alpha|Pyrococcus woesei

Query: 1 EELNRQLEKL 10
EE+ Q+EKL
Sbjct: 159 EEVKAQVEKL 168




290|Sequence|1446|1455|QLEKLLKEGS

>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLEKLLKEGS 10
+L K+LK+GS
Sbjct: 399 KLSKMLKQGS 408


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 1 QLEKLLKEGS 10
+LE+LLKE S
Sbjct: 169 RLERLLKERS 178


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 1 QLEKLLKEGS 10
+LEK +KEG
Sbjct: 205 ELEKFIKEGD 214


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QLEKLLKEG 9
++EK LKEG
Sbjct: 250 EIEKYLKEG 258


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EKLLKEGS 10
E+LLKEG+
Sbjct: 812 ERLLKEGA 819


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EKLLKEG 9
E+LLKEG
Sbjct: 375 ERLLKEG 381


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 2 LEKLLKEG 9
L KLLKEG
Sbjct: 314 LVKLLKEG 321


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QLEKLLKE 8
+LEK+LKE
Sbjct: 290 ELEKILKE 297


>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 1 QLEKLLKEG 9
QLE ++KEG
Sbjct: 150 QLEDMIKEG 158


>sp|Y210_METM6|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 2 LEKLLKEG 9
EK+LKEG
Sbjct: 202 FEKILKEG 209


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QLEKLLKE 8
+LEK+LKE
Sbjct: 290 ELEKILKE 297


>sp|Y1702_METM7|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 2 LEKLLKEG 9
EK+LKEG
Sbjct: 202 FEKILKEG 209


>sp|Y1514_METVS|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus vannielii

Query: 2 LEKLLKEG 9
EK+LKEG
Sbjct: 202 FEKILKEG 209


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 2 LEKLLKEGS 10
LE +LKEGS
Sbjct: 1558 LEAILKEGS 1566


>sp|Y678_METMP|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 2 LEKLLKEG 9
EK+LKEG
Sbjct: 202 FEKILKEG 209


>sp|HIS6_IGNH4|IMIDAZOLE glycerol phosphate synthase subunit|Ignicoccus hospitalis (strain

Query: 1 QLEKLLKEGS 10
+EKLLK G+
Sbjct: 89 HIEKLLKAGA 98


>sp|GCH3_METTH|GTP cyclohydrolase III|Methanothermobacter thermautotrophicus (strain

Query: 2 LEKLLKEGS 10
++KL+KEG+
Sbjct: 166 MKKLIKEGA 174


>sp|RL10_META3|LARGE ribosomal subunit protein uL10|Methanococcus aeolicus (strain

Query: 2 LEKLLKEG 9
L+KLLKEG
Sbjct: 20 LKKLLKEG 27


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QLEKLLKE 8
+LEKLLK+
Sbjct: 290 ELEKLLKD 297


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QLEKLLKE 8
+LEKLLK+
Sbjct: 290 ELEKLLKD 297


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 2 LEKLLKEGS 10
+EKL +EGS
Sbjct: 359 VEKLSREGS 367


>sp|NITR_PYRAB|NITRILASE abyssi (strain GE5 /

Query: 3 EKLLKEGS 10
EKL+KE S
Sbjct: 24 EKLIKEAS 31




291|Sequence|1451|1460|LKEGSSNQRV

***** No hits found ******


292|Sequence|1456|1465|SNQRVFDWIE

>sp|DMSB_HALSA|PUTATIVE dimethyl sulfoxide reductase iron-sulfur|Halobacterium salinarum

Query: 2 NQRVFDWIE 10
N RVF+W E
Sbjct: 116 NARVFNWDE 124


>sp|Y980_PYRAB|UPF0282 protein PYRAB09800|Pyrococcus abyssi (strain GE5 /

Query: 2 NQRVFDWI 9
N R DWI
Sbjct: 190 NDRAIDWI 197


>sp|NARC_HALMT|PROBABLE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 SNQRVFDWI 9
+ RV+DW+
Sbjct: 14 AGNRVYDWM 22


>sp|DGGGP_THEPD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermofilum pendens (strain DSM 2475

Query: 3 QRVFDWI 9
QRV DW+
Sbjct: 11 QRVADWL 17


>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 QRVFDWI 9
QRV DW+
Sbjct: 205 QRVHDWL 211


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 NQRVFDW 8
NQ FDW
Sbjct: 252 NQNRFDW 258


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NQRVFDWI 9
N+R++ W+
Sbjct: 345 NKRIYKWL 352




293|Sequence|1461|1470|FDWIEANLSE

>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 2 DWIEANL 8
DW++ANL
Sbjct: 227 DWLKANL 233


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 2 DWIEANLSE 10
DWI+ NL++
Sbjct: 136 DWIQYNLAK 144


>sp|SYH_METS5|HISTIDINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 WIEANLSE 10
WIE+N E
Sbjct: 23 WIESNFRE 30


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDWIEAN 7
DWI+AN
Sbjct: 613 LDWIKAN 619


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 2 DWIEANLS 9
D IEANLS
Sbjct: 245 DQIEANLS 252


>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DWIEA 6
DWIEA
Sbjct: 149 DWIEA 153


>sp|TRUA_METMJ|TRNA pseudouridine synthase A|Methanoculleus marisnigri (strain ATCC

Query: 2 DWIEANLS 9
DW EAN +
Sbjct: 42 DWREANFA 49


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DWIEANLSE 10
DW N+SE
Sbjct: 443 DWFAENVSE 451


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FDWIEANL 8
WIE NL
Sbjct: 256 LQWIEGNL 263


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDWIEANLS 9
+DWI N+S
Sbjct: 2508 WDWIGTNIS 2516




294|Sequence|1466|1475|ANLSEQQIVS

>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ANLSEQQIVS 10
+NLSE +I+S
Sbjct: 254 SNLSELKIIS 263




295|Sequence|1471|1480|QQIVSNTLVR

***** No hits found ******


296|Sequence|1476|1485|NTLVRALMTA

***** No hits found ******


297|Sequence|1481|1490|ALMTAVCYSA

>sp|Y1590_CALMQ|MEMO1 family protein Cmaq_1590|Caldivirga maquilingensis (strain ATCC

Query: 1 ALMTAVCYS 9
A+MTA+ YS
Sbjct: 238 AIMTAIVYS 246




298|Sequence|1486|1495|VCYSAIIFET

>sp|MFNC_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate transaminase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CYSAIIFE 9
CYSAI F+
Sbjct: 201 CYSAIEFD 208


>sp|IXTPA_METKA|DITP/XTP pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 3 YSAIIFET 10
YSA +F+T
Sbjct: 80 YSAYVFDT 87




299|Sequence|1491|1500|IIFETPLRVD

>sp|RL4_HALMA|LARGE ribosomal subunit protein uL4|Haloarcula marismortui (strain ATCC

Query: 2 IFETPLRVD 10
+FETP+R D
Sbjct: 21 VFETPVRSD 29


>sp|RL4_HALWD|LARGE ribosomal subunit protein uL4|Haloquadratum walsbyi (strain DSM

Query: 2 IFETPLRVD 10
+FETP R D
Sbjct: 21 VFETPYRPD 29


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IIFETPLRVD 10
I+FETP VD
Sbjct: 297 IVFETPDVVD 306


>sp|LIPB2_PICTO|PROBABLE octanoyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 1 IIFETPL 7
IIFETP+
Sbjct: 32 IIFETPM 38


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 2 IFETPLRVD 10
+F+TP R D
Sbjct: 21 VFQTPFRPD 29


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IIFETPLRV 9
+ FE PL+V
Sbjct: 346 VTFEVPLKV 354


>sp|RL4_HALSA|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain

Query: 2 IFETPLRVD 10
+FE P+R D
Sbjct: 21 VFEEPVRPD 29


>sp|RL4_HALS3|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain

Query: 2 IFETPLRVD 10
+FE P+R D
Sbjct: 21 VFEEPVRPD 29


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 2 IFETPLRVD 10
+F TP R D
Sbjct: 21 VFSTPFRPD 29


>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IIFETP 6
IIFETP
Sbjct: 233 IIFETP 238


>sp|GCH1_SULTO|GTP cyclohydrolase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 ETPLRV 9
ETPLRV
Sbjct: 36 ETPLRV 41


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 2 IFETPLRVD 10
+F TP R D
Sbjct: 21 VFSTPFRPD 29




300|Sequence|1496|1505|PLRVDVAVLK

>sp|RRP4_THEPD|EXOSOME complex component Rrp4|Thermofilum pendens (strain DSM 2475

Query: 1 PLRVDVAVL 9
P RV++AVL
Sbjct: 201 PQRVEIAVL 209


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 PLRVDVAVLK 10
PL +DV+ L+
Sbjct: 145 PLNIDVSYLR 154


>sp|RRP41_PYRAB|EXOSOME complex component Rrp41|Pyrococcus abyssi (strain GE5 /

Query: 1 PLRVDVAVLK 10
P++++V VLK
Sbjct: 28 PIKMEVGVLK 37


>sp|PYRH_CENSY|URIDYLATE kinase|Cenarchaeum symbiosum (strain A)

Query: 2 LRVDVAVLK 10
LR DV VLK
Sbjct: 203 LRADVNVLK 211


>sp|RRP41_THEON|EXOSOME complex component Rrp41|Thermococcus onnurineus (strain NA1)

Query: 1 PLRVDVAVLK 10
P++++V VLK
Sbjct: 28 PIKMEVGVLK 37


>sp|RRP41_THEKO|EXOSOME complex component Rrp41|Thermococcus kodakarensis (strain ATCC

Query: 1 PLRVDVAVLK 10
P++++V VLK
Sbjct: 28 PIKMEVGVLK 37




301|Sequence|1501|1510|VAVLKARAKL

***** No hits found ******


302|Sequence|1506|1515|ARAKLLQKYL

>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 2 RAKLLQKYL 10
RAK L+KYL
Sbjct: 85 RAKNLEKYL 93


>sp|GSA_ARCFU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AKLLQKYL 10
AKL+QKY
Sbjct: 95 AKLIQKYF 102


>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 1 ARAKLLQKYL 10
A AKLLQK L
Sbjct: 319 AVAKLLQKQL 328


>sp|PGK_SACS2|PHOSPHOGLYCERATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 AKLLQKYL 10
AKL+ KYL
Sbjct: 79 AKLISKYL 86


>sp|CFBE_METJA|COENZYME F(430) synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RAKLLQKY 9
RAK+L KY
Sbjct: 235 RAKILDKY 242


>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC

Query: 2 RAKLLQKYL 10
RAK L++YL
Sbjct: 80 RAKRLEEYL 88


>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RAKLLQKY 9
+AKLLQ+Y
Sbjct: 56 KAKLLQEY 63




303|Sequence|1511|1520|LQKYLCDEQK

>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 LQKYLCDEQK 10
LQ+Y+ DE+K
Sbjct: 175 LQRYVFDEEK 184


>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 LQKYLCDEQK 10
LQ+Y+ DE+K
Sbjct: 175 LQRYVFDEEK 184


>sp|ARSR_HALSA|PUTATIVE arsenical resistance operon repressor|Halobacterium salinarum

Query: 1 LQKYLCDEQ 9
LQ+YL DE+
Sbjct: 7 LQRYLTDER 15


>sp|HJC_PYRFU|CROSSOVER junction endodeoxyribonuclease Hjc|Pyrococcus furiosus (strain

Query: 2 QKYLCDEQK 10
+KYLC E K
Sbjct: 40 KKYLCIEVK 48


>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 3 KYLCDEQ 9
K+LCDE
Sbjct: 302 KFLCDEH 308


>sp|RL7A_AERPE|LARGE ribosomal subunit protein eL8|Aeropyrum pernix (strain ATCC

Query: 5 LCDEQK 10
LCDE+K
Sbjct: 69 LCDEKK 74


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 3 KYLCDEQ 9
K+LCDE
Sbjct: 302 KFLCDEH 308


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 3 KYLCDEQ 9
K+LCDE
Sbjct: 302 KFLCDEH 308


>sp|FEN_PYRFU|FLAP endonuclease 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KYLCDEQ 9
K+LCDE
Sbjct: 302 KFLCDEH 308


>sp|FEN_THEKO|FLAP endonuclease 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KYLCDEQ 9
K+LCDE
Sbjct: 302 KFLCDEH 308


>sp|RL7A_STAMF|LARGE ribosomal subunit protein eL8|Staphylothermus marinus (strain

Query: 5 LCDEQK 10
LCDE+K
Sbjct: 70 LCDEKK 75


>sp|RFRNP_ARCFU|RNA-FREE ribonuclease P|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LQKYLCDEQ 9
L++Y CDE+
Sbjct: 63 LKRYGCDEE 71


>sp|PGP_METS3|PHOSPHOGLYCOLATE phosphatase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 KYLCDE 8
KYLC+E
Sbjct: 167 KYLCNE 172


>sp|FEN_PYRHO|FLAP endonuclease 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KYLCDEQ 9
K+LCDE
Sbjct: 302 KFLCDEH 308


>sp|RL7A_DESA1|LARGE ribosomal subunit protein eL8|Desulfurococcus amylolyticus

Query: 5 LCDEQK 10
LCDE+K
Sbjct: 70 LCDEKK 75


>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LQKYLCDEQ 9
LQ+Y+ DE+
Sbjct: 176 LQRYIYDEK 184


>sp|Y653_METJA|UNCHARACTERIZED protein MJ0653|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KYLCD 7
+YLCD
Sbjct: 179 RYLCD 183




304|Sequence|1516|1525|CDEQKELQAL

>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 2 DEQKELQAL 10
DE+KE++AL
Sbjct: 180 DERKEIEAL 188


>sp|KADA_SACS2|ADENYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DEQKELQAL 10
++Q+ELQAL
Sbjct: 63 EKQRELQAL 71


>sp|KADA_SACI7|ADENYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DEQKELQAL 10
++Q+ELQAL
Sbjct: 63 EKQRELQAL 71


>sp|KADA_SACI6|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DEQKELQAL 10
++Q+ELQAL
Sbjct: 63 EKQRELQAL 71


>sp|KADA_SACI4|ADENYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DEQKELQAL 10
++Q+ELQAL
Sbjct: 63 EKQRELQAL 71


>sp|KADA_SACI3|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 DEQKELQAL 10
++Q+ELQAL
Sbjct: 63 EKQRELQAL 71


>sp|KADA_SACI2|ADENYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DEQKELQAL 10
++Q+ELQAL
Sbjct: 63 EKQRELQAL 71


>sp|KADA_SACI1|ADENYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DEQKELQAL 10
++Q+ELQAL
Sbjct: 63 EKQRELQAL 71


>sp|COFC_METMS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 CDEQKELQA 9
CD +KE++A
Sbjct: 56 CDVKKEVKA 64




305|Sequence|1521|1530|ELQALYALQA

***** No hits found ******


306|Sequence|1526|1535|YALQALVVTL

>sp|EF1B_METBF|ELONGATION factor 1-beta|Methanosarcina barkeri (strain Fusaro /

Query: 1 YALQALVVTL 10
+ L+AL+VTL
Sbjct: 47 FGLKALIVTL 56


>sp|EF1B_METAC|ELONGATION factor 1-beta|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YALQALVVTL 10
+ L+AL+VTL
Sbjct: 47 FGLKALIVTL 56


>sp|EF1B_METMA|ELONGATION factor 1-beta|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YALQALVVTL 10
+ L+AL+VTL
Sbjct: 47 FGLKALIVTL 56




307|Sequence|1531|1540|LVVTLEQPPN

>sp|QUED_HALS3|PROBABLE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Halobacterium salinarum

Query: 2 VVTLEQPP 9
VV LEQPP
Sbjct: 104 VVVLEQPP 111


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 VTLEQPPN 10
+ LE+PPN
Sbjct: 28 IKLEEPPN 35


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 VTLEQPPN 10
+ LE+PPN
Sbjct: 28 IILEEPPN 35


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 4 TLEQPPN 10
TLE+PP+
Sbjct: 106 TLEKPPD 112


>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VVTLEQPPN 10
V+T+E+ PN
Sbjct: 159 VITIEKNPN 167


>sp|PGP_HALMA|PHOSPHOGLYCOLATE phosphatase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LVVTLEQP 8
LVV+L+QP
Sbjct: 117 LVVSLDQP 124


>sp|Y701_ARCFU|UNCHARACTERIZED protein AF_0701|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VVTLEQPPN 10
V+ LE+P N
Sbjct: 25 VIVLEEPKN 33


>sp|PTFA_HALVD|PTS system fructose-specific EIIA component|Haloferax volcanii

Query: 2 VVTLEQPP 9
+++LE+PP
Sbjct: 14 LISLEEPP 21




308|Sequence|1536|1545|EQPPNLLRMF

>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EQPPNLLRMF 10
E PP+ LR+F
Sbjct: 608 EVPPDSLRLF 617


>sp|TRUD_NATPD|PROBABLE tRNA pseudouridine synthase D|Natronomonas pharaonis (strain ATCC

Query: 1 EQPPNLLRMF 10
E P NL RMF
Sbjct: 268 ELPSNLQRMF 277


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EQPPNLLR 8
E PP LLR
Sbjct: 297 EMPPTLLR 304


>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EQPPNLL 7
E+PP+LL
Sbjct: 63 EEPPDLL 69


>sp|HPRT_METKA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 EQPPNLLR 8
E PP LLR
Sbjct: 31 ELPPELLR 38


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 1 EQPPNLLRMF 10
E P +L++MF
Sbjct: 164 ENPGDLMKMF 173


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 1 EQPPNLLRM 9
E+PPN+ M
Sbjct: 354 EEPPNVSTM 362


>sp|TRUD_METAC|PROBABLE tRNA pseudouridine synthase D|Methanosarcina acetivorans (strain

Query: 3 PPNLLRMF 10
P NL RMF
Sbjct: 265 PKNLYRMF 272


>sp|TH11_HALSA|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 2 QPPNLLRMF 10
+PP L+R F
Sbjct: 53 EPPELMRGF 61


>sp|TH11_HALS3|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 2 QPPNLLRMF 10
+PP L+R F
Sbjct: 53 EPPELMRGF 61


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 PPNLLRMF 10
PPN L+M
Sbjct: 325 PPNTLKML 332


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 3 PPNLLRMF 10
P NL RMF
Sbjct: 262 PQNLYRMF 269


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PPNLLRMF 10
PPN L+M
Sbjct: 325 PPNTLKML 332


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 QPPNLLR 8
QPP +LR
Sbjct: 346 QPPKILR 352


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain Fusaro

Query: 3 PPNLLRMF 10
P NL RMF
Sbjct: 262 PKNLYRMF 269


>sp|RL31_THEON|LARGE ribosomal subunit protein eL31|Thermococcus onnurineus (strain

Query: 1 EQPPNLLRM 9
E+PPN LR+
Sbjct: 64 EKPPNKLRV 72


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 1 EQPPNLLR 8
E PP +LR
Sbjct: 193 EMPPEILR 200




309|Sequence|1541|1550|LLRMFFDALY

>sp|PYRE_THEKO|OROTATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 LLRMFFD 7
L+RMFFD
Sbjct: 8 LIRMFFD 14


>sp|TRPD_METTM|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter marburgensis (strain

Query: 2 LRMFFDAL 9
LRMF D L
Sbjct: 280 LRMFMDVL 287


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 5 FFDALY 10
F+DALY
Sbjct: 30 FYDALY 35


>sp|Y1134_METJA|UNCHARACTERIZED protein MJ1134|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLRMFFDALY 10
LLRM +ALY
Sbjct: 63 LLRMKSEALY 72




310|Sequence|1546|1555|FDALYDEDVV

>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 FDALYDEDVV 10
+DALYD D+V
Sbjct: 31 YDALYDSDLV 40


>sp|FTR_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 FDALYDED 8
FDAL DED
Sbjct: 105 FDALDDED 112


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 FDALYDE 7
FDA+YDE
Sbjct: 377 FDAVYDE 383


>sp|PYRH_PYRCJ|URIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DALYDED 8
DA+YD+D
Sbjct: 136 DAVYDDD 142


>sp|DPHB_THEVO|DIPHTHINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FDALYDEDVV 10
FDAL D+V
Sbjct: 20 FDALRTSDIV 29


>sp|KHSE_THEVO|HOMOSERINE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FDALYDE 7
FDA YD+
Sbjct: 28 FDAFYDQ 34


>sp|ASSY_METBA|ARGININOSUCCINATE synthase|Methanosarcina barkeri

Query: 2 DALYDEDVV 10
+ALY ED+V
Sbjct: 355 NALYSEDLV 363


>sp|ASSY_METAC|ARGININOSUCCINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DALYDEDVV 10
+ALY ED+V
Sbjct: 354 NALYSEDLV 362


>sp|ASSY_METMA|ARGININOSUCCINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DALYDEDVV 10
+ALY ED+V
Sbjct: 354 NALYSEDLV 362


>sp|Y1201_ARCFU|UNCHARACTERIZED protein AF_1201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DALYDEDVV 10
+ L+DEDV+
Sbjct: 125 EGLFDEDVI 133


>sp|T2M2_METJA|TYPE II restriction enzyme MjaII|Methanocaldococcus jannaschii (strain

Query: 1 FDALYDEDV 9
FD + DED+
Sbjct: 23 FDTISDEDI 31


>sp|ASSY_METBF|ARGININOSUCCINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DALYDEDVV 10
+ALY ED+V
Sbjct: 354 NALYSEDLV 362


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 FDALYDEDV 9
FD +Y EDV
Sbjct: 350 FDLMYYEDV 358


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FDALYDEDV 9
FD +Y EDV
Sbjct: 350 FDLMYYEDV 358


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FDALYDEDV 9
FD +Y EDV
Sbjct: 350 FDLMYYEDV 358


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FDALYDEDV 9
FD +Y EDV
Sbjct: 350 FDLMYYEDV 358


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FDALYDEDV 9
FD +Y EDV
Sbjct: 350 FDLMYYEDV 358


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FDALYDEDV 9
FD +Y EDV
Sbjct: 350 FDLMYYEDV 358


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FDALYDEDV 9
FD +Y EDV
Sbjct: 350 FDLMYYEDV 358


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FDALYDEDV 9
FD +Y EDV
Sbjct: 350 FDLMYYEDV 358


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DALYDEDVV 10
DA+Y+E++V
Sbjct: 357 DAIYNEEMV 365


>sp|UVRC_METMP|UVRABC system protein C|Methanococcus maripaludis (strain DSM 14266

Query: 2 DALYDEDVV 10
D Y+EDV+
Sbjct: 235 DVKYNEDVI 243


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 LYDEDVV 10
LY+EDVV
Sbjct: 344 LYEEDVV 350




311|Sequence|1551|1560|DEDVVKEDAF

>sp|TDH_PYRHO|L-THREONINE 3-dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DEDVVKE 7
+EDVVKE
Sbjct: 221 EEDVVKE 227


>sp|TDH_PYRFU|L-THREONINE 3-dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DEDVVKE 7
+EDVVKE
Sbjct: 221 EEDVVKE 227


>sp|TDH_PYRAB|L-THREONINE 3-dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 DEDVVKE 7
+EDVVKE
Sbjct: 221 EEDVVKE 227


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DEDVVKEDAF 10
+EDVV+E+A
Sbjct: 428 EEDVVEEEAL 437


>sp|RS3_METJA|SMALL ribosomal subunit protein uS3|Methanocaldococcus jannaschii (strain

Query: 1 DEDVVKEDA 9
DE ++KEDA
Sbjct: 190 DEIIIKEDA 198


>sp|MPTA_THEVO|GTP cyclohydrolase MptA|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EDVVKEDAF 10
EDVV+E AF
Sbjct: 230 EDVVREVAF 238




312|Sequence|1556|1565|KEDAFYSWES

>sp|Y79B_METJA|UNCHARACTERIZED protein MJ0795.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 AFYSWE 9
AFYSWE
Sbjct: 135 AFYSWE 140


>sp|Y1571_PYRHO|PUTATIVE transport protein PH1571|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DAFYSWES 10
DAF+SW S
Sbjct: 94 DAFFSWLS 101


>sp|COFD_METJA|2-PHOSPHO-L-LACTATE transferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KEDAFYSWE 9
KED FY+ E
Sbjct: 71 KEDTFYTHE 79


>sp|PURQ_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothrix thermoacetophila (strain DSM

Query: 2 EDAFYSWE 9
E AF++W+
Sbjct: 225 ERAFFAWQ 232


>sp|GFCR_METVS|TRANSCRIPTIONAL regulator GfcR|Methanococcus vannielii (strain ATCC 35089

Query: 1 KEDAFYSWES 10
K D F W+S
Sbjct: 56 KADIFLEWDS 65


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EDAFYSWES 10
EDA +SW+S
Sbjct: 628 EDAKFSWKS 636


>sp|RS8_NITMS|SMALL ribosomal subunit protein uS8|Nitrosopumilus maritimus (strain

Query: 1 KEDAFYSWE 9
K D F +WE
Sbjct: 82 KTDEFNNWE 90


>sp|AROB_PYRAE|3-DEHYDROQUINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EDAFYSW 8
++ FYSW
Sbjct: 174 DEEFYSW 180


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KEDAFYSWES 10
K DA SWE+
Sbjct: 386 KSDATISWEN 395


>sp|EF1A_CALMQ|ELONGATION factor 1-alpha|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KEDAFYSW 8
KED Y+W
Sbjct: 60 KEDFKYAW 67


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC

Query: 2 EDAFYSW 8
EDAF++W
Sbjct: 50 EDAFWAW 56


>sp|YC4B_METJA|UNCHARACTERIZED protein MJ1249.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 AFYSWE 9
AFY+WE
Sbjct: 135 AFYNWE 140


>sp|Y27B_METJA|UNCHARACTERIZED protein MJ0275.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EDAFYSWE 9
++ FYSW+
Sbjct: 77 DNEFYSWD 84


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain DSM

Query: 3 DAFYSWE 9
DA+Y W+
Sbjct: 210 DAYYIWK 216


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 3 DAFYSWE 9
DA+Y W+
Sbjct: 210 DAYYIWK 216


>sp|GFO6_HALMA|D-XYLOSE 1-dehydrogenase [NADP(+)]|Haloarcula marismortui (strain ATCC 43049

Query: 2 EDAFYSWE 9
E AFY W+
Sbjct: 283 EPAFYPWD 290


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EDAFYSWES 10
EDA +SW++
Sbjct: 630 EDAKFSWKA 638




313|Sequence|1561|1570|YSWESSKDPA

>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 YSWESSKDPA 10
Y WE +K PA
Sbjct: 334 YEWELTKSPA 343


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 1 YSWESSKDPA 10
Y WE +K PA
Sbjct: 329 YEWELTKSPA 338


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 1 YSWESSKDPA 10
Y WE +K PA
Sbjct: 329 YEWELTKSPA 338


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 SWESSKDPA 10
SWESS++ A
Sbjct: 936 SWESSEEGA 944


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SWESSKDPA 10
SWESS++ A
Sbjct: 936 SWESSEEGA 944


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 YSWESSKDPA 10
Y WE K PA
Sbjct: 318 YEWELEKSPA 327


>sp|KAD6_METKA|PUTATIVE adenylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 WESSKDPA 10
WE DPA
Sbjct: 64 WEPESDPA 71


>sp|Y1360_METJA|UNCHARACTERIZED protein MJ1360|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YSWESSKDP 9
Y W KDP
Sbjct: 43 YLWTGKKDP 51


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 2 SWESSKDP 9
SWE + DP
Sbjct: 521 SWELNYDP 528


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 YSWESSKDPA 10
Y WE K P
Sbjct: 328 YEWEPEKGPG 337


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 YSWESSKDPA 10
Y WE K P
Sbjct: 329 YEWEPEKGPG 338




314|Sequence|1566|1575|SKDPAEQQGK

>sp|RRP4_THEVO|EXOSOME complex component Rrp4|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DPAEQQGK 10
DP E QGK
Sbjct: 15 DPVEVQGK 22




315|Sequence|1571|1580|EQQGKGVALK

>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 1 EQQGKGVA 8
E QGKG+
Sbjct: 537 ENQGKGIG 544


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 1 EQQGKGVA 8
E QGKG+
Sbjct: 536 ENQGKGIG 543


>sp|YPZ3_METTF|UNCHARACTERIZED protein ORF3'|Methanothermobacter thermautotrophicus

Query: 2 QQGKGVALK 10
++GK VA+K
Sbjct: 32 EEGKSVAIK 40


>sp|YPV3_METTF|UNCHARACTERIZED protein ORF3|Methanothermobacter thermautotrophicus

Query: 2 QQGKGVALK 10
++GK VA+K
Sbjct: 12 EEGKSVAIK 20




316|Sequence|1576|1585|GVALKSVTAF

***** No hits found ******


317|Sequence|1581|1590|SVTAFFKWLR

>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 SVTAFFKWL 9
+VTAFFK+L
Sbjct: 22 AVTAFFKYL 30


>sp|PDXT_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum calidifontis (strain

Query: 1 SVTAFFKWL 9
+ TAF KWL
Sbjct: 185 TTTAFHKWL 193


>sp|FLAD_METJA|PUTATIVE flagella-related protein D|Methanocaldococcus jannaschii (strain

Query: 1 SVTAFFKWL 9
S+T FKWL
Sbjct: 234 SMTLVFKWL 242


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 AFFKWLR 10
AF+KW++
Sbjct: 530 AFYKWIK 536


>sp|IXTPA_PYRHO|DITP/XTP pyrophosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SVTAFFKWLR 10
++ AFF+WL+
Sbjct: 172 ALKAFFEWLK 181


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 SVTAFFKWL 9
+VTA FK+L
Sbjct: 22 AVTALFKYL 30


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 SVTAFFKWL 9
+VTA FK+L
Sbjct: 24 AVTALFKYL 32


>sp|Y384_ARCFU|UPF0252 protein AF_0384|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FFKWLR 10
F KWLR
Sbjct: 183 FIKWLR 188


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 5 FFKWLR 10
F+KWL+
Sbjct: 182 FYKWLK 187


>sp|RL10E_SACS2|LARGE ribosomal subunit protein uL16|Saccharolobus solfataricus (strain

Query: 1 SVTAFFKWL 9
S T+FF W+
Sbjct: 79 SETSFFMWI 87


>sp|RL10E_SACI7|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 SVTAFFKWL 9
S T+FF W+
Sbjct: 79 SETSFFMWI 87


>sp|RL10E_SACI6|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 SVTAFFKWL 9
S T+FF W+
Sbjct: 79 SETSFFMWI 87


>sp|RL10E_SACI4|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 SVTAFFKWL 9
S T+FF W+
Sbjct: 79 SETSFFMWI 87


>sp|RL10E_SACI3|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 SVTAFFKWL 9
S T+FF W+
Sbjct: 79 SETSFFMWI 87


>sp|RL10E_SACI2|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 SVTAFFKWL 9
S T+FF W+
Sbjct: 79 SETSFFMWI 87


>sp|RL10E_SACI1|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 SVTAFFKWL 9
S T+FF W+
Sbjct: 79 SETSFFMWI 87


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 2 VTAFFKWL 9
VTAF K+L
Sbjct: 89 VTAFLKYL 96


>sp|HTPX_METKA|PROTEASE HtpX homolog|Methanopyrus kandleri (strain AV19 /

Query: 4 AFFKWLR 10
FF WLR
Sbjct: 25 GFFLWLR 31


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 FFKWLR 10
FKWLR
Sbjct: 303 LFKWLR 308


>sp|IXTPA_ARCFU|DITP/XTP pyrophosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FFKWLR 10
FF+WL+
Sbjct: 172 FFRWLK 177


>sp|Y1151_METJA|UNCHARACTERIZED protein MJ1151|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FFKWLR 10
+FKWL+
Sbjct: 90 YFKWLK 95


>sp|Y521_ARCFU|UNCHARACTERIZED N-acetyltransferase AF_0521|Archaeoglobus fulgidus (strain ATCC

Query: 2 VTAFFKWL 9
V +FKWL
Sbjct: 36 VKNYFKWL 43




318|Sequence|1586|1599|FKWLREAEEESDHN

>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FKWLRE 6
FKWLRE
Sbjct: 304 FKWLRE 309


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KWLREAEEESD 12
K LREAE+E+D
Sbjct: 212 KILREAEKEAD 222


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 3 WLREAEEESDH 13
W+ E EE DH
Sbjct: 252 WIAEKLEEGDH 262


>sp|GCH1L_HALSA|GTP cyclohydrolase 1 type 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 WLREAE 8
WLREAE
Sbjct: 185 WLREAE 190


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FKWLREAEEES 11
+ WL EAEE S
Sbjct: 12 YPWLIEAEEYS 22


>sp|CAS1B_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 8 EEESDHN 14
+EESDHN
Sbjct: 269 KEESDHN 275


>sp|HIS6_METB6|IMIDAZOLE glycerol phosphate synthase subunit|Methanoregula boonei (strain

Query: 2 KWLREAEE 9
+W +EAEE
Sbjct: 172 RWAKEAEE 179


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 3 WLREAEEESDH 13
W+ E EE DH
Sbjct: 253 WISEKIEEGDH 263


>sp|BAX1_SULTO|ENDONUCLEASE Bax1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FKWLREAE 8
+KWLRE E
Sbjct: 365 YKWLRELE 372


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FKWLREAEEE 10
KWLRE E
Sbjct: 495 LKWLRENTPE 504


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 2 KWLREAEE 9
+W++EAEE
Sbjct: 40 EWIKEAEE 47


>sp|LEUC_NATPD|3-ISOPROPYLMALATE dehydratase large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FKWLREAEEESD 12
++WLRE + +D
Sbjct: 241 YEWLRETDAFAD 252


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FKWLREAEEESD 12
KWL+ E+D
Sbjct: 472 LKWLKNNSNEND 483


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 FKWLREAE 8
KWLREA+
Sbjct: 493 LKWLREAK 500


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KWLREAEEESDH 13
K LR E+E DH
Sbjct: 27 KILRVEEKEHDH 38


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FKWLREAEEESD 12
++LRE EE+D
Sbjct: 221 LEFLREITEEND 232


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 4 LREAEEESDH 13
LREA E DH
Sbjct: 39 LREAVREHDH 48


>sp|HIS6_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri (strain

Query: 2 KWLREAEE 9
+W R+AEE
Sbjct: 177 QWARKAEE 184


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 4 LREAEEESDHN 14
LR+AEE D N
Sbjct: 108 LRKAEELLDQN 118


>sp|HIS6_METPE|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaerula palustris

Query: 2 KWLREAEE 9
+W+++AEE
Sbjct: 172 RWVQDAEE 179


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 3 WLREAEEE 10
WL E+E+E
Sbjct: 62 WLSESEDE 69


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 2 KWLREAEEE 10
KW++E EE+
Sbjct: 275 KWVKEIEEK 283


>sp|METE_SULTO|METHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KWLREA 7
KWLREA
Sbjct: 19 KWLREA 24


>sp|THS_METMP|CHAPERONIN subunit|Methanococcus maripaludis (strain DSM 14266

Query: 4 LREAEEESDHN 14
LR+AEE D N
Sbjct: 104 LRKAEELLDQN 114


>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FKWLREAE 8
KWLREA+
Sbjct: 489 LKWLREAK 496


>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 3 WLREAEEESD 12
W R+A+ +SD
Sbjct: 322 WKRKAKSQSD 331


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KWLREAEEE 10
KW R+ +EE
Sbjct: 425 KWRRKKDEE 433


>sp|THSA_THEKO|CHAPERONIN subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LREAEEESDHN 14
LR+AEE D N
Sbjct: 108 LRKAEELLDQN 118


>sp|THSA_THEK1|CHAPERONIN subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 4 LREAEEESDHN 14
LR+AEE D N
Sbjct: 108 LRKAEELLDQN 118


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KWLREAEE 9
+WL EA+E
Sbjct: 40 EWLEEAQE 47


>sp|NADE_METJA|NH(3)-DEPENDENT NAD(+) synthetase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KWLREAEEESDHN 14
K++RE EE++ N
Sbjct: 16 KFIREKVEEANAN 28


>sp|SYY_PICTO|TYROSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 FKWLREAEEESDH 13
F W E E+SD+
Sbjct: 106 FVWASELVEKSDY 118


>sp|THS_METTL|CHAPERONIN subunit|Methanothermococcus thermolithotrophicus

Query: 4 LREAEEESDHN 14
LR+AEE D N
Sbjct: 106 LRKAEELLDQN 116


>sp|TLDD_SACS2|ZINC metalloprotease TldD homolog|Saccharolobus solfataricus (strain

Query: 1 FKWLREAEE 9
FK++++AEE
Sbjct: 2 FKYIKKAEE 10


>sp|HEM11_PYRAR|GLUTAMYL-TRNA reductase 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 WLREAEEESD 12
W + AEEE +
Sbjct: 325 WFKIAEEEGE 334


>sp|THSB_THEK8|CHAPERONIN subunit beta|Thermococcus sp. (strain KS-8)

Query: 4 LREAEEESDHN 14
LR+AEE D N
Sbjct: 108 LRKAEELLDQN 118


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LREAEEESDHN 14
LR+AEE D N
Sbjct: 107 LRKAEELLDQN 117


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 1 FKWLREAEEESD 12
K+LR+ E+SD
Sbjct: 952 LKYLRDVLEDSD 963


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FKWLREAE 8
+WLREA+
Sbjct: 489 LRWLREAK 496


>sp|HERA_SULAC|DNA double-strand break repair helicase|Sulfolobus acidocaldarius

Query: 2 KWLREAEEESDHN 14
+W R EEE H+
Sbjct: 477 EWKRAKEEEIVHS 489


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KWLREAEE 9
+W++EAE+
Sbjct: 39 EWIKEAED 46


>sp|THSB_THEKO|CHAPERONIN subunit beta|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LREAEEESDHN 14
LR+AEE D N
Sbjct: 108 LRKAEELLDQN 118


>sp|THSB_THEK1|CHAPERONIN subunit beta|Thermococcus sp. (strain JCM 11816

Query: 4 LREAEEESDHN 14
LR+AEE D N
Sbjct: 108 LRKAEELLDQN 118


>sp|HEM1_HALMA|GLUTAMYL-TRNA reductase|Haloarcula marismortui (strain ATCC 43049

Query: 2 KWLREAEEESD 12
K LR+A EE D
Sbjct: 384 KSLRDAAEEDD 394






THE END