HTRA2_HUMAN Blast Output
Archaea
1|Sequence|1|10|MAAPRAGRGA

>sp|RS27_METPE|SMALL ribosomal subunit protein eS27|Methanosphaerula palustris (strain

Query: 1 MAAPRAGRGA 10
+A PR GR A
Sbjct: 43 LAEPRGGRAA 52




2|Sequence|6|15|AGRGAGWSLR

>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RGAGWSLR 10
RG WS+R
Sbjct: 94 RGVTWSMR 101


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GAGWSL 9
GAGW+L
Sbjct: 220 GAGWAL 225


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus

Query: 1 AGRGAGW 7
AGRG GW
Sbjct: 67 AGRGGGW 73


>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus (strain

Query: 1 AGRGAGWSLR 10
AG G GW +R
Sbjct: 113 AGIGIGWLMR 122


>sp|RL30E_SACS2|LARGE ribosomal subunit protein eL30|Saccharolobus solfataricus (strain

Query: 3 RGAGWSL 9
+G+GW L
Sbjct: 72 KGSGWDL 78


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 2 GRGAGWSLR 10
G G G+SLR
Sbjct: 381 GAGRGFSLR 389


>sp|DTDA_AERPE|D-AMINOACYL-TRNA deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AGRGAGWSL 9
AGRGAG +L
Sbjct: 13 AGRGAGRAL 21


>sp|KHSE_PYRFU|HOMOSERINE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GRGAGW 7
GRGA W
Sbjct: 286 GRGAKW 291


>sp|PIMT_PYRFU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GRGAGWS 8
G G+GW+
Sbjct: 89 GTGSGWN 95


>sp|PIMT_PYRHO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GRGAGWS 8
G G+GW+
Sbjct: 89 GTGSGWN 95




3|Sequence|11|20|GWSLRAWRAL

>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GWSLRAWRAL 10
GW W+AL
Sbjct: 39 GWPDHQWKAL 48


>sp|MAX1_METAC|SODIUM/CALCIUM exchanger MaX1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GWSLRAWRAL 10
GW ++ W +
Sbjct: 325 GWEIKRWEGV 334


>sp|RS3A_PYRAR|SMALL ribosomal subunit protein eS1|Pyrobaculum arsenaticum (strain DSM

Query: 2 WSLRAWRAL 10
W+L+ W A+
Sbjct: 22 WALKKWFAV 30


>sp|TFE_CENSY|TRANSCRIPTION factor E|Cenarchaeum symbiosum (strain A)

Query: 1 GWSLRAWRA 9
GW + WR+
Sbjct: 74 GWFVYRWRS 82


>sp|RL39_DESA1|LARGE ribosomal subunit protein eL39|Desulfurococcus amylolyticus

Query: 1 GWSLRAWR 8
G+SLR WR
Sbjct: 38 GFSLRNWR 45


>sp|RS3A_METHJ|SMALL ribosomal subunit protein eS1|Methanospirillum hungatei JF-1

Query: 1 GWSLRAW 7
GW ++W
Sbjct: 13 GWKAKSW 19


>sp|SECD_METKA|PROTEIN-EXPORT membrane protein SecD|Methanopyrus kandleri (strain AV19 /

Query: 1 GWSLRAWRAL 10
GW WR L
Sbjct: 5 GWMKENWRLL 14




4|Sequence|16|25|AWRALGGIRW

>sp|Y1111_HALSA|UNCHARACTERIZED GTP-binding protein VNG_1111G|Halobacterium salinarum (strain ATCC

Query: 2 WRALGGIR 9
WRALG IR
Sbjct: 289 WRALGLIR 296


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AWRALGGIR 9
AWR + G+R
Sbjct: 302 AWRDIPGVR 310


>sp|RRP42_THEGJ|EXOSOME complex component Rrp42|Thermococcus gammatolerans (strain DSM

Query: 1 AWRALGGIR 9
AW LGG R
Sbjct: 50 AWVRLGGTR 58


>sp|SYP_HALLT|PROLINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 AWRALGGI 8
+WRALG +
Sbjct: 269 SWRALGAL 276


>sp|Y1296_METAC|PUTATIVE RNase MA_1296|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WRALGGIR 9
WR + G+R
Sbjct: 68 WRGIAGMR 75


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 WRALGGIR 9
WR + G+R
Sbjct: 331 WRGITGVR 338


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AWRALGGI 8
+WRALG +
Sbjct: 268 SWRALGAL 275


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AWRALGGI 8
+WRALG +
Sbjct: 265 SWRALGAL 272


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 AWRALGGI 8
AW LGG+
Sbjct: 336 AWTELGGL 343


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AWRALGGI 8
AW LGG+
Sbjct: 336 AWTELGGL 343


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 1 AWRALGGI 8
AW LGG+
Sbjct: 336 AWTELGGL 343


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 AWRALGGI 8
AW LGG+
Sbjct: 336 AWTELGGL 343


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 AWRALGGI 8
AW LGG+
Sbjct: 336 AWTELGGL 343


>sp|GFCR_METS3|TRANSCRIPTIONAL regulator GfcR|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 WRALGG 7
W++LGG
Sbjct: 56 WKSLGG 61


>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 1 AWRALGGI 8
AW LGG+
Sbjct: 341 AWTRLGGL 348


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AWRALGGI 8
+WRA+G +
Sbjct: 266 SWRAMGAL 273




5|Sequence|21|30|GGIRWGRRPR

>sp|RNZ_THEAC|RIBONUCLEASE Z|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GGIRWGRR 8
GG+R GRR
Sbjct: 196 GGVRKGRR 203


>sp|RNZ_THEVO|RIBONUCLEASE Z|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GGIRWGRR 8
GGIR GR+
Sbjct: 196 GGIRKGRK 203


>sp|PGK2_METFV|2-PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 4 RWGRRP 9
+W RRP
Sbjct: 239 KWARRP 244


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 2 GIRWG 6
G+RWG
Sbjct: 153 GVRWG 157


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 1 GGIRWGR 7
GG+ WGR
Sbjct: 76 GGVVWGR 82


>sp|RS2_META3|SMALL ribosomal subunit protein uS2|Methanococcus aeolicus (strain ATCC

Query: 2 GIRWGRR 8
G RWG+R
Sbjct: 213 GRRWGKR 219


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 1 GGIRW 5
GGIRW
Sbjct: 70 GGIRW 74


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GGIRW 5
GGIRW
Sbjct: 70 GGIRW 74


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 GGIRW 5
GGIRW
Sbjct: 70 GGIRW 74


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 1 GGIRW 5
GGIRW
Sbjct: 70 GGIRW 74


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 1 GGIRW 5
GGIRW
Sbjct: 70 GGIRW 74


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GGIRW 5
GGIRW
Sbjct: 70 GGIRW 74


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 2 GIRWGRR 8
G+ WGR+
Sbjct: 348 GVGWGRK 354


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 GGIRW 5
GGIRW
Sbjct: 70 GGIRW 74


>sp|RL24E_PYRCJ|LARGE ribosomal subunit protein eL24|Pyrobaculum calidifontis (strain

Query: 1 GGIRWGRRPR 10
+++GR PR
Sbjct: 39 SAVKYGRNPR 48


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GGIRW 5
GGIRW
Sbjct: 70 GGIRW 74


>sp|RL24E_PYRAE|LARGE ribosomal subunit protein eL24|Pyrobaculum aerophilum (strain

Query: 1 GGIRWGRRPR 10
+++GR PR
Sbjct: 39 SAVKYGRNPR 48


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 5 WGRRPR 10
WG RPR
Sbjct: 234 WGYRPR 239


>sp|Y378_METTH|UPF0104 membrane protein MTH_378|Methanothermobacter thermautotrophicus

Query: 2 GIRWG 6
G+RWG
Sbjct: 56 GLRWG 60




6|Sequence|26|35|GRRPRLTPDL

>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RRPRLTPDL 10
+RP + PDL
Sbjct: 237 KRPNIAPDL 245


>sp|GATD_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfolobus acidocaldarius (strain ATCC

Query: 3 RPRLTPD 9
RP LTPD
Sbjct: 113 RPALTPD 119


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC

Query: 3 RPRLTPDL 10
RP TPDL
Sbjct: 28 RPSYTPDL 35


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 3 RPRLTPDL 10
RP TPDL
Sbjct: 28 RPSYTPDL 35


>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 3 RPRLTPD 9
RP+++PD
Sbjct: 63 RPKISPD 69


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RRPRLTP 8
RRP LTP
Sbjct: 367 RRPHLTP 373


>sp|LYSZ_PYRAE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum aerophilum

Query: 4 PRLTPD 9
PRLTP+
Sbjct: 198 PRLTPE 203


>sp|SYH_HALMA|HISTIDINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GRRPRLTPDL 10
GR+ LTP+L
Sbjct: 69 GRKVALTPEL 78


>sp|LYSZ_PYRCJ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 4 PRLTPD 9
PRLTP+
Sbjct: 198 PRLTPE 203


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 1 GRRPRLTPD 9
G RP + PD
Sbjct: 99 GNRPHMRPD 107


>sp|SYH_NATPD|HISTIDINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GRRPRLTPDL 10
GR LTP+L
Sbjct: 69 GREVSLTPEL 78




7|Sequence|31|40|LTPDLRALLT

>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 2 TPDLRAL 8
TPDLRAL
Sbjct: 251 TPDLRAL 257


>sp|TRPC_HALVD|INDOLE-3-GLYCEROL phosphate synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 LTPDLRALL 9
L PD+RA+L
Sbjct: 8 LAPDVRAIL 16


>sp|GVPN_HALMT|GAS vesicle ATPase GvpN|Haloferax mediterranei (strain ATCC 33500

Query: 3 PDLRALLT 10
PD RA+LT
Sbjct: 213 PDFRAILT 220


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 4 DLRALLT 10
DLRAL+T
Sbjct: 68 DLRALMT 74


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 2 TPDLRALLT 10
TPD RA+ T
Sbjct: 82 TPDERAIAT 90




8|Sequence|36|45|RALLTSGTSD

>sp|Y165_METJA|UNCHARACTERIZED protein MJ0165|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ALLTSGTSD 10
+LT+GTSD
Sbjct: 128 GILTAGTSD 136


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 2 ALLTSGTS 9
ALLT+GTS
Sbjct: 612 ALLTAGTS 619


>sp|RL29_PYRFU|LARGE ribosomal subunit protein uL29|Pyrococcus furiosus (strain ATCC

Query: 1 RALLTSGTS 9
R LLT GTS
Sbjct: 29 RGLLTMGTS 37




9|Sequence|41|50|SGTSDPRARV

>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TSDPRARV 10
T DPRAR+
Sbjct: 268 TYDPRARI 275


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GTSDPRA 8
GTSDPRA
Sbjct: 128 GTSDPRA 134


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GTSDPRA 8
GTSDPRA
Sbjct: 128 GTSDPRA 134


>sp|MCRD_METVO|METHYL-COENZYME M reductase operon protein|Methanococcus voltae

Query: 2 GTSDPRAR 9
G +DPR+R
Sbjct: 137 GVTDPRSR 144


>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 TSDPRARV 10
T DPRA++
Sbjct: 263 TYDPRAKI 270


>sp|BACH_NATPH|HALORHODOPSIN pharaonis (Natronobacterium pharaonis)

Query: 2 GTSDPRARV 10
G DPRA++
Sbjct: 58 GLDDPRAKL 66


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 TSDPRARV 10
T DPRA++
Sbjct: 268 TYDPRAKI 275


>sp|TRUD_THEAC|PROBABLE tRNA pseudouridine synthase D|Thermoplasma acidophilum (strain

Query: 1 SGTSDPRAR 9
+GT D RAR
Sbjct: 75 AGTKDKRAR 83


>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 2 GTSDPR 7
GTSDPR
Sbjct: 68 GTSDPR 73




10|Sequence|46|55|PRARVTYGTP

>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PRARVTYGTP 10
PR + YG P
Sbjct: 37 PRLKPVYGKP 46


>sp|CAS5_HALVD|CRISPR-ASSOCIATED protein Cas5|Haloferax volcanii (strain ATCC 29605

Query: 1 PRARVTYG 8
P+ +VTYG
Sbjct: 204 PQGKVTYG 211


>sp|PSA_PYRHO|PROTEASOME subunit alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 RVTYGTP 10
R+TYG P
Sbjct: 102 RLTYGEP 108


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 ARVTYGTP 10
ARV YG P
Sbjct: 115 ARVFYGKP 122


>sp|PSA_PYRAB|PROTEASOME subunit alpha|Pyrococcus abyssi (strain GE5 /

Query: 4 RVTYGTP 10
R+TYG P
Sbjct: 102 RLTYGEP 108


>sp|PSA_THESM|PROTEASOME subunit alpha|Thermococcus sibiricus (strain DSM 12597

Query: 4 RVTYGTP 10
R+TYG P
Sbjct: 102 RLTYGEP 108


>sp|PSA_PYRFU|PROTEASOME subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 4 RVTYGTP 10
R+TYG P
Sbjct: 102 RLTYGEP 108


>sp|PSA_THEKO|PROTEASOME subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 RVTYGTP 10
R+TYG P
Sbjct: 102 RLTYGEP 108


>sp|PSA_THEK1|PROTEASOME subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 4 RVTYGTP 10
R+TYG P
Sbjct: 102 RLTYGEP 108


>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 RVTYGTP 10
RVT GTP
Sbjct: 344 RVTVGTP 350


>sp|PSA_THEGJ|PROTEASOME subunit alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 4 RVTYGTP 10
R+TYG P
Sbjct: 102 RLTYGEP 108




11|Sequence|51|60|TYGTPSLWAR

>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 2 YGTPSLW 8
YG+PS W
Sbjct: 334 YGSPSYW 340


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 YGTPSLWAR 10
Y PSLW R
Sbjct: 339 YQQPSLWRR 347


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YGTPSLWAR 10
Y PSLW R
Sbjct: 339 YQQPSLWRR 347


>sp|RFCL_HALMA|REPLICATION factor C large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 YGTPSLWAR 10
YG PS W++
Sbjct: 325 YGPPSYWSK 333


>sp|AROD_METB6|3-DEHYDROQUINATE dehydratase|Methanoregula boonei (strain DSM 21154

Query: 2 YGTPSLWAR 10
+G+P WA+
Sbjct: 64 FGSPEEWAK 72


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 YGTPSLWAR 10
YG PS W +
Sbjct: 326 YGPPSYWRK 334


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 YGTPSLWAR 10
YG PS W +
Sbjct: 326 YGPPSYWRK 334


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 YGTPSLWAR 10
Y PSLW +
Sbjct: 334 YQPPSLWKK 342


>sp|HIS4_METMJ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanoculleus marisnigri

Query: 2 YGTPSLWA 9
YG P+ WA
Sbjct: 28 YGDPAAWA 35


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 2 YGTPSL 7
YGTP+L
Sbjct: 88 YGTPTL 93


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 5 PSLWAR 10
PSLW R
Sbjct: 329 PSLWKR 334


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TYGTPSLW 8
TYG +LW
Sbjct: 227 TYGVTNLW 234


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 YGTPSL 7
YGTPSL
Sbjct: 83 YGTPSL 88


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TYGTPSLW 8
TYG +LW
Sbjct: 227 TYGVTNLW 234


>sp|RFCL_HALLT|REPLICATION factor C large subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 YGTPSLWA 9
YG P W+
Sbjct: 336 YGRPQFWS 343


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 GTPSLWAR 10
GTP W R
Sbjct: 699 GTPEKWLR 706


>sp|GGGPS_ARCFU|GERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TYGTPSLWA 9
TYG P L A
Sbjct: 171 TYGNPELVA 179




12|Sequence|56|65|SLWARLSVGV

>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 3 WARLSVG 9
W R+SVG
Sbjct: 350 WIRVSVG 356


>sp|RRP42_METTH|EXOSOME complex component Rrp42|Methanothermobacter thermautotrophicus

Query: 2 LWARLSVGV 10
L AR+S+GV
Sbjct: 217 LTARISIGV 225


>sp|COXX1_NATPD|PROTOHEME IX farnesyltransferase 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SLWARLSV 8
SLWA LSV
Sbjct: 267 SLWAFLSV 274




13|Sequence|61|70|LSVGVTEPRA

>sp|MCRD_METVO|METHYL-COENZYME M reductase operon protein|Methanococcus voltae

Query: 3 VGVTEPRA 10
+GVT+PR+
Sbjct: 136 LGVTDPRS 143


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 3 VGVTEPR 9
VGV EPR
Sbjct: 192 VGVAEPR 198


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VGVTEPR 9
VGV EPR
Sbjct: 112 VGVEEPR 118


>sp|AROE_HALLT|SHIKIMATE dehydrogenase (NADP(+))|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 SVGVTEPRA 10
SVG+ EP A
Sbjct: 192 SVGMDEPEA 200


>sp|MVK_SACS2|MEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LSVGVTEPRA 10
S+G+T P A
Sbjct: 245 FSLGITSPEA 254




14|Sequence|66|75|TEPRACLTSG

>sp|HEM3_METKA|PROBABLE porphobilinogen deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 EPRACLTS 9
+PR CL S
Sbjct: 103 DPRECLVS 110




15|Sequence|71|80|CLTSGTPGPR

>sp|Y309_METBU|UPF0280 protein Mbur_0309|Methanococcoides burtonii (strain DSM 6242

Query: 1 CLTSGTPGP 9
C +SGT GP
Sbjct: 145 CTSSGTVGP 153


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LTSGTPGPR 10
L G PGP+
Sbjct: 53 LVDGVPGPK 61


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 2 LTSGTPG 8
LTSG PG
Sbjct: 168 LTSGVPG 174


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 LTSGTPG 8
LTSG PG
Sbjct: 168 LTSGVPG 174


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 2 LTSGTPG 8
LTSG PG
Sbjct: 168 LTSGVPG 174


>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain DSM

Query: 2 LTSGTPG 8
LTSG PG
Sbjct: 168 LTSGVPG 174


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 2 LTSGTPG 8
LTSG PG
Sbjct: 168 LTSGVPG 174


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 2 LTSGTPG 8
LTSG PG
Sbjct: 168 LTSGVPG 174


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 2 LTSGTPG 8
LTSG PG
Sbjct: 168 LTSGVPG 174


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 2 LTSGTPG 8
LTSG PG
Sbjct: 168 LTSGVPG 174


>sp|FOLD_METHJ|BIFUNCTIONAL protein FolD|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LTSGTPGPR 10
L +G PGPR
Sbjct: 124 LVTGLPGPR 132


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 2 LTSGTPG 8
LTSG PG
Sbjct: 168 LTSGVPG 174


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 2 LTSGTPGP 9
L++G PGP
Sbjct: 32 LSAGEPGP 39


>sp|ALBA1_SACSH|DNA/RNA-BINDING protein Alba 1|Saccharolobus shibatae (strain ATCC 51178

Query: 2 LTSGTPGP 9
++SGTP P
Sbjct: 1 MSSGTPTP 8


>sp|ALBA1_SACS2|DNA/RNA-BINDING protein Alba 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LTSGTPGP 9
++SGTP P
Sbjct: 1 MSSGTPTP 8


>sp|ALBA1_SACI5|DNA/RNA-BINDING protein Alba 1|Saccharolobus islandicus (strain REY15A)

Query: 2 LTSGTPGP 9
++SGTP P
Sbjct: 1 MSSGTPTP 8


>sp|RL10E_THESM|LARGE ribosomal subunit protein uL16|Thermococcus sibiricus (strain DSM

Query: 5 GTPGPR 10
G PGPR
Sbjct: 25 GAPGPR 30


>sp|Y3697_METBF|UPF0280 protein Mbar_A3697|Methanosarcina barkeri (strain Fusaro /

Query: 1 CLTSGTPGP 9
C ++GT GP
Sbjct: 161 CTSAGTVGP 169


>sp|Y1297_METTP|UPF0280 protein Mthe_1297|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 CLTSGTPGP 9
C +SGT GP
Sbjct: 147 CSSSGTIGP 155


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 3 TSGTPGP 9
T+G PGP
Sbjct: 146 TTGRPGP 152


>sp|PELO_CENSY|PROTEIN pelota homolog|Cenarchaeum symbiosum (strain A)

Query: 2 LTSGTPGPR 10
L SG+PG R
Sbjct: 155 LRSGSPGKR 163


>sp|Y1715_METAC|UPF0280 protein MA_1715|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CLTSGTPGP 9
C ++GT GP
Sbjct: 161 CTSAGTVGP 169


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 SGTPGPR 10
SGT GPR
Sbjct: 474 SGTCGPR 480


>sp|Y2648_METMA|UPF0280 protein MM_2648|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CLTSGTPGP 9
C ++GT GP
Sbjct: 164 CTSAGTVGP 172


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 1 CLTSGTPGP 9
CL SG GP
Sbjct: 319 CLASGNLGP 327




16|Sequence|76|85|TPGPRAQLTA

>sp|GCH3_METST|GTP cyclohydrolase III|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TPGPRAQ 7
TPGPRA+
Sbjct: 18 TPGPRAE 24


>sp|COFE_HALSA|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC

Query: 1 TPGPRAQLTA 10
TPGPRA+ A
Sbjct: 55 TPGPRAEEIA 64


>sp|COFE_HALS3|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC

Query: 1 TPGPRAQLTA 10
TPGPRA+ A
Sbjct: 55 TPGPRAEEIA 64


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGPRAQ 7
PGPRA+
Sbjct: 28 PGPRAK 33


>sp|KTHY_METLZ|PROBABLE thymidylate kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TPGPRAQLTA 10
P P+A LTA
Sbjct: 104 VPDPKAWLTA 113


>sp|DLYKI_THEX4|D-LYXOSE ketol-isomerase|Thermofilum sp. (strain ex4484_79)

Query: 1 TPGPRAQL 8
TP PRA++
Sbjct: 106 TPNPRARI 113




17|Sequence|81|90|AQLTAVTPDT

>sp|IF5A_PYRFU|TRANSLATION initiation factor 5A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AQLTAVTPDT 10
AQ+ AVTPDT
Sbjct: 76 AQVIAVTPDT 85


>sp|IF5A_PYRAB|TRANSLATION initiation factor 5A|Pyrococcus abyssi (strain GE5 /

Query: 1 AQLTAVTPDT 10
AQ+ A+TPDT
Sbjct: 76 AQVIAITPDT 85


>sp|IF5A_THEON|TRANSLATION initiation factor 5A|Thermococcus onnurineus (strain NA1)

Query: 1 AQLTAVTPDT 10
AQ+ A+TPDT
Sbjct: 76 AQIIAMTPDT 85


>sp|IF5A_PYRHO|TRANSLATION initiation factor 5A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AQLTAVTPDT 10
AQ+ A+TPDT
Sbjct: 76 AQVIAITPDT 85


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain ATCC

Query: 1 AQLTAVTPDT 10
A +TAV PDT
Sbjct: 92 AMMTAVEPDT 101


>sp|IF5A_THESM|TRANSLATION initiation factor 5A|Thermococcus sibiricus (strain DSM 12597

Query: 1 AQLTAVTPDT 10
Q+ A+TPDT
Sbjct: 76 GQIIAITPDT 85


>sp|IF5A_THEKO|TRANSLATION initiation factor 5A|Thermococcus kodakarensis (strain ATCC

Query: 1 AQLTAVTPDT 10
Q+ A+TPDT
Sbjct: 76 GQIIAITPDT 85


>sp|IF5A_THEGJ|TRANSLATION initiation factor 5A|Thermococcus gammatolerans (strain DSM 15229

Query: 1 AQLTAVTPDT 10
Q+ A+TPDT
Sbjct: 76 GQVIAITPDT 85


>sp|HEM3_PYRIL|PROBABLE porphobilinogen deaminase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AQLTAVTPDT 10
AQ+ AV PD
Sbjct: 22 AQIKAVEPDV 31


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 AQLTAVTP 8
A+LTA+TP
Sbjct: 438 AELTAITP 445


>sp|HEM3_PYRNV|PROBABLE porphobilinogen deaminase|Pyrobaculum neutrophilum (strain DSM

Query: 1 AQLTAVTPD 9
AQ+ AV PD
Sbjct: 22 AQIKAVEPD 30




18|Sequence|86|95|VTPDTRTREA

>sp|FENR_METS5|FERREDOXIN--NADP reductase|Metallosphaera sedula (strain ATCC 51363

Query: 3 PDTRTRE 9
PD RTRE
Sbjct: 78 PDIRTRE 84


>sp|Y2678_METMA|UNCHARACTERIZED serpin-like protein MM_2675|Methanosarcina mazei (strain ATCC

Query: 1 VTPDTR 6
+TPDTR
Sbjct: 201 ITPDTR 206




19|Sequence|91|100|RTREASENSG

>sp|COFC_METMJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RTREASENSG 10
R+RE ENSG
Sbjct: 184 RSREYLENSG 193


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RTREASENS 9
+TREA +NS
Sbjct: 732 QTREAIQNS 740


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RTREASENS 9
+TREA +NS
Sbjct: 732 QTREAIQNS 740


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RTREASENS 9
+TREA +NS
Sbjct: 732 QTREAIQNS 740


>sp|GLMD_THEKO|GLUCOSAMINE-6-PHOSPHATE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TREASENSG 10
TREA +N G
Sbjct: 171 TREALKNEG 179




20|Sequence|96|105|SENSGTRSRA

***** No hits found ******


21|Sequence|101|110|TRSRAWLAVA

>sp|TSGCD_HALVD|PUTATIVE glucose ABC transporter permease|Haloferax volcanii (strain ATCC

Query: 1 TRSRAWLAVA 10
T R W+AVA
Sbjct: 222 TVGRGWIAVA 231


>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 3 SRAWLA 8
SRAW+A
Sbjct: 190 SRAWIA 195


>sp|NTPTH_IGNH4|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 SRAWLA 8
SRAWLA
Sbjct: 58 SRAWLA 63




22|Sequence|106|115|WLAVALGAGG

>sp|PSA_THESM|PROTEASOME subunit alpha|Thermococcus sibiricus (strain DSM 12597

Query: 1 WLAVALGAG 9
W AVA+G+G
Sbjct: 161 WKAVAIGSG 169


>sp|PSA_PYRHO|PROTEASOME subunit alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WLAVALGAG 9
W AVA+G+G
Sbjct: 161 WKAVAIGSG 169


>sp|PSA_PYRFU|PROTEASOME subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WLAVALGAG 9
W AVA+G+G
Sbjct: 161 WKAVAIGSG 169


>sp|PSA_PYRAB|PROTEASOME subunit alpha|Pyrococcus abyssi (strain GE5 /

Query: 1 WLAVALGAG 9
W AVA+G+G
Sbjct: 161 WKAVAIGSG 169


>sp|PSA_THEKO|PROTEASOME subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WLAVALGAG 9
W AVA+G+G
Sbjct: 161 WKAVAIGSG 169


>sp|PSA_THEK1|PROTEASOME subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 1 WLAVALGAG 9
W AVA+G+G
Sbjct: 161 WKAVAIGSG 169


>sp|PSA_THEON|PROTEASOME subunit alpha|Thermococcus onnurineus (strain NA1)

Query: 1 WLAVALGAG 9
W AVA+G+G
Sbjct: 161 WRAVAIGSG 169


>sp|PSA_THEGJ|PROTEASOME subunit alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WLAVALGAG 9
W AVA+G+G
Sbjct: 161 WKAVAIGSG 169


>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 1 WLAVALGAGG 10
WLA++LG G
Sbjct: 64 WLAMSLGKKG 73


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 1 WLAVALGAGG 10
WLA++LG G
Sbjct: 64 WLAMSLGKKG 73


>sp|PSA_SULTO|PROTEASOME subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WLAVALGAGG 10
+ AVA+G GG
Sbjct: 163 YYAVAIGQGG 172


>sp|PSA_SULAC|PROTEASOME subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WLAVALGAGG 10
+ AVA+G GG
Sbjct: 163 YYAVAIGQGG 172


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 2 LAVALGAG 9
LAVALG G
Sbjct: 379 LAVALGCG 386


>sp|PSA_HALWD|PROTEASOME subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 WLAVALGA 8
W AV++GA
Sbjct: 162 WKAVSIGA 169


>sp|PSA1_HALVD|PROTEASOME subunit alpha 1|Haloferax volcanii (strain ATCC 29605

Query: 1 WLAVALGA 8
W AV++GA
Sbjct: 162 WKAVSIGA 169


>sp|PSA_METS5|PROTEASOME subunit alpha|Metallosphaera sedula (strain ATCC 51363

Query: 3 AVALGAGG 10
AVA+G GG
Sbjct: 164 AVAIGQGG 171


>sp|PSB1_STAMF|PROTEASOME subunit beta 1|Staphylothermus marinus (strain ATCC 43588

Query: 4 VALGAGG 10
VALG+GG
Sbjct: 143 VALGSGG 149


>sp|KAE1_SACS2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 WLAVALGAG 9
++AVALG G
Sbjct: 73 YIAVALGPG 81


>sp|KAE1_SACI7|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 WLAVALGAG 9
++AVALG G
Sbjct: 73 YIAVALGPG 81


>sp|KAE1_SACI2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 WLAVALGAG 9
++AVALG G
Sbjct: 73 YIAVALGPG 81


>sp|KAE1_SACI1|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 WLAVALGAG 9
++AVALG G
Sbjct: 73 YIAVALGPG 81


>sp|KAE1_SACI6|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 WLAVALGAG 9
++AVALG G
Sbjct: 73 YIAVALGPG 81


>sp|KAE1_SACI4|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 WLAVALGAG 9
++AVALG G
Sbjct: 73 YIAVALGPG 81


>sp|KAE1_SACI3|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 WLAVALGAG 9
++AVALG G
Sbjct: 73 YIAVALGPG 81




23|Sequence|111|120|LGAGGAVLLL

>sp|Y1426_METTH|UPF0284 protein MTH_1426|Methanothermobacter thermautotrophicus (strain

Query: 1 LGAGGAVLL 9
+GAGGA+LL
Sbjct: 327 VGAGGAMLL 335


>sp|RNZ_METKA|RIBONUCLEASE Z|Methanopyrus kandleri (strain AV19 /

Query: 1 LGAGGAV 7
LG GGAV
Sbjct: 10 LGTGGAV 16


>sp|COBS1_ARCFU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGAGGAVLL 9
LG GGAV L
Sbjct: 94 LGTGGAVFL 102


>sp|RNZ_PYRAE|RIBONUCLEASE Z|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LGAGGAV 7
LG+GGAV
Sbjct: 9 LGSGGAV 15


>sp|RNZ_HALLT|RIBONUCLEASE Z|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LGAGGAV 7
LG GGAV
Sbjct: 8 LGTGGAV 14


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LGAGGAVLL 9
LG+GG +L+
Sbjct: 311 LGSGGLILV 319


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LGAGGAVLL 9
LG+GG +L+
Sbjct: 311 LGSGGLILV 319


>sp|AROE_NITMS|SHIKIMATE dehydrogenase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LGAGGA 6
LGAGGA
Sbjct: 125 LGAGGA 130


>sp|RNZ_HALVD|RIBONUCLEASE Z|Haloferax volcanii (strain ATCC 29605

Query: 1 LGAGGAV 7
LG GGAV
Sbjct: 8 LGTGGAV 14


>sp|COBS_PYRIL|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GAGGAVLLL 10
GAGGAV L
Sbjct: 39 GAGGAVYFL 47




24|Sequence|116|125|AVLLLLWGGG

>sp|THSA_THEAC|THERMOSOME subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 LLWGGG 10
LWGGG
Sbjct: 404 FLWGGG 409


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 5 LLWGGG 10
L+WGGG
Sbjct: 233 LVWGGG 238


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 5 LLWGGG 10
L+WGGG
Sbjct: 233 LVWGGG 238


>sp|THPS_SULAC|THERMOPSIN acidocaldarius (strain ATCC 33909

Query: 5 LLWGGG 10
L+WGGG
Sbjct: 260 LVWGGG 265


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LLLLWGG 9
L+ LWGG
Sbjct: 183 LMTLWGG 189


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LLLLWGG 9
L+ LWGG
Sbjct: 183 LITLWGG 189


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 5 LLWGGG 10
L WGGG
Sbjct: 233 LAWGGG 238


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 5 LLWGGG 10
L WGGG
Sbjct: 233 LAWGGG 238


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 5 LLWGGG 10
L WGGG
Sbjct: 233 LAWGGG 238


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 LLWGGG 10
+ WGGG
Sbjct: 97 VFWGGG 102


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 LLWGGG 10
+ WGGG
Sbjct: 94 VFWGGG 99


>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LLLLWGGG 10
LLLL+ GG
Sbjct: 4 LLLLYSGG 11


>sp|XERA_THEKO|TYROSINE recombinase XerA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VLLLLWGGG 10
++LLL+G G
Sbjct: 122 IVLLLYGAG 130


>sp|TBP_THEVO|TATA-BOX-BINDING protein|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VLLLLWGGG 10
V+LLL+G G
Sbjct: 146 VVLLLFGSG 154


>sp|TBP_THEAC|TATA-BOX-BINDING protein|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VLLLLWGGG 10
V+LLL+G G
Sbjct: 146 VVLLLFGSG 154


>sp|TBP_PICTO|TATA-BOX-BINDING protein|Picrophilus torridus (strain ATCC 700027

Query: 2 VLLLLWGGG 10
V+LLL+G G
Sbjct: 146 VVLLLFGSG 154


>sp|TBP_METTH|TATA-BOX-BINDING protein|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VLLLLWGGG 10
V+LLL+G G
Sbjct: 143 VVLLLFGSG 151


>sp|TBP_METST|TATA-BOX-BINDING protein|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VLLLLWGGG 10
V+LLL+G G
Sbjct: 143 VVLLLFGSG 151


>sp|TBP_METS3|TATA-BOX-BINDING protein|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 VLLLLWGGG 10
V+LLL+G G
Sbjct: 143 VVLLLFGSG 151


>sp|T1S2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii

Query: 3 LLLLWGG 9
+LLLW G
Sbjct: 85 ILLLWDG 91


>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AVLLLLWGGG 10
++LLL +GGG
Sbjct: 99 SLLLLPYGGG 108


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LLLWGGG 10
++LW GG
Sbjct: 223 IILWDGG 229


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 AVLLLLWGGG 10
++LLL +GGG
Sbjct: 102 SLLLLPYGGG 111


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 4 LLLWGGG 10
L++WGG
Sbjct: 231 LIVWGGA 237




25|Sequence|121|130|LWGGGRGPPA

>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WGGGRGP 8
WGGGR P
Sbjct: 205 WGGGRMP 211


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LWGGGRG 7
WGGG+G
Sbjct: 98 FWGGGKG 104


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LWGGGRG 7
WGGG+G
Sbjct: 95 FWGGGKG 101


>sp|THSA_THEAC|THERMOSOME subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LWGGG 5
LWGGG
Sbjct: 405 LWGGG 409


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 2 WGGGRG 7
W GGRG
Sbjct: 138 WDGGRG 143


>sp|RFRNP_AERPE|RNA-FREE ribonuclease P|Aeropyrum pernix (strain ATCC 700893

Query: 4 GGRGPPA 10
GGR PP+
Sbjct: 2 GGRPPPS 8


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GGGRGPPA 10
GGG G PA
Sbjct: 888 GGGGGKPA 895


>sp|RL4_METBU|LARGE ribosomal subunit protein uL4|Methanococcoides burtonii (strain

Query: 2 WGGGRG 7
WG GRG
Sbjct: 62 WGSGRG 67


>sp|RDFA_HALVD|ROD-DETERMINING factor A|Haloferax volcanii (strain ATCC 29605

Query: 4 GGRGP 8
GGRGP
Sbjct: 12 GGRGP 16


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GGGRGP 8
GG RGP
Sbjct: 467 GGSRGP 472


>sp|RL4_METB6|LARGE ribosomal subunit protein uL4|Methanoregula boonei (strain DSM

Query: 2 WGGGRG 7
WG GRG
Sbjct: 61 WGSGRG 66


>sp|RL4_METS3|LARGE ribosomal subunit protein uL4|Methanobrevibacter smithii (strain

Query: 2 WGGGRG 7
WG GRG
Sbjct: 61 WGSGRG 66


>sp|ARLY_PYRAR|ARGININOSUCCINATE lyase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 WGGGRG 7
W GGRG
Sbjct: 7 WIGGRG 12


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LWGGGRGP 8
L GGG GP
Sbjct: 155 LIGGGTGP 162


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 1 LWGGGRG 7
LW GGRG
Sbjct: 139 LWRGGRG 145


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GGGRGP 8
GG RGP
Sbjct: 467 GGSRGP 472


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 3 GGGRGP 8
GG RGP
Sbjct: 467 GGSRGP 472


>sp|CHED_THEKO|PROBABLE chemoreceptor glutamine deamidase CheD|Thermococcus kodakarensis

Query: 4 GGRGPPA 10
GGRG PA
Sbjct: 54 GGRGNPA 60


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 GGGRGP 8
GGGR P
Sbjct: 892 GGGRNP 897


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 WGGGRG 7
W GGRG
Sbjct: 5115 WNGGRG 5120


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 3 GGGRGP 8
GG RGP
Sbjct: 467 GGSRGP 472


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 3 GGGRGP 8
GG RGP
Sbjct: 467 GGSRGP 472


>sp|ILVD_METVS|DIHYDROXY-ACID dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GGGRGP 8
GG RGP
Sbjct: 467 GGSRGP 472


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GGGRGP 8
GG RGP
Sbjct: 467 GGSRGP 472




26|Sequence|126|135|RGPPAVLAAV

>sp|Y1595_METJA|UPF0104 membrane protein MJ1595|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PPAVLAAV 10
PP+V AAV
Sbjct: 296 PPSVAAAV 303


>sp|HTPX_PYRAE|PROTEASE HtpX homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GPPAVLAAV 10
G PA+LAAV
Sbjct: 217 GNPAILAAV 225


>sp|SUCC_PYRCJ|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum calidifontis

Query: 2 GPPAVLAA 9
GPP VL A
Sbjct: 39 GPPVVLKA 46




27|Sequence|131|140|VLAAVPSPPP

>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VLAAVPSPP 9
VLA+ P PP
Sbjct: 315 VLASRPKPP 323


>sp|Y335_METJA|UNCHARACTERIZED protein MJ0335|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLAAVPSPP 9
+LA+ P PP
Sbjct: 224 ILASAPVPP 232


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLAAVPSPP 9
+LA P+PP
Sbjct: 338 ILATRPNPP 346


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LAAVPSPP 9
LAA P PP
Sbjct: 329 LAAHPKPP 336


>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 2 LAAVPSPPP 10
+A VP PP
Sbjct: 470 MATVPDDPP 478


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 2 LAAVPSPPP 10
+A VP PP
Sbjct: 470 MATVPDDPP 478




28|Sequence|136|145|PSPPPASPRS

>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 SPPPASP 8
SPPPA+P
Sbjct: 113 SPPPANP 119


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SPPPASP 8
SPPPA+P
Sbjct: 114 SPPPANP 120


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 SPPPASP 8
SPPPA+P
Sbjct: 114 SPPPANP 120


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SPPPASP 8
+PPPA+P
Sbjct: 113 APPPANP 119


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 PPPASP 8
PPPA+P
Sbjct: 114 PPPANP 119


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 PPPASP 8
PPPA+P
Sbjct: 114 PPPANP 119


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 PPPASP 8
PPPA+P
Sbjct: 114 PPPANP 119


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 PPPASP 8
PPPA+P
Sbjct: 114 PPPANP 119


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 PPPASP 8
PPPA+P
Sbjct: 114 PPPANP 119


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SPPPASP 8
+PPPA+P
Sbjct: 113 TPPPANP 119


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PPPASP 8
PPPA+P
Sbjct: 115 PPPANP 120


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PPPASP 8
PPPA+P
Sbjct: 114 PPPANP 119


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 SPPPASP 8
+PPPA+P
Sbjct: 114 TPPPANP 120


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PPPASP 8
PPPA+P
Sbjct: 112 PPPANP 117


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SPPPASP 8
+PPPA+P
Sbjct: 114 TPPPANP 120


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PPPASP 8
PPPA+P
Sbjct: 113 PPPANP 118


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SPPPASP 8
+PPPA+P
Sbjct: 114 TPPPANP 120


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 PPPASP 8
PPPA+P
Sbjct: 113 PPPANP 118


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPPASP 8
PPPA+P
Sbjct: 98 PPPANP 103


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PPPASP 8
PPPA+P
Sbjct: 109 PPPANP 114


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PPPASP 8
PPPA+P
Sbjct: 112 PPPANP 117


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PPPASP 8
PPPA+P
Sbjct: 112 PPPANP 117


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 PPPASP 8
PPPA+P
Sbjct: 113 PPPANP 118


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PPPASP 8
PPPA+P
Sbjct: 112 PPPANP 117


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PPPASP 8
PPPA+P
Sbjct: 111 PPPANP 116


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 PPPASP 8
PPPA+P
Sbjct: 107 PPPANP 112


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PPPASP 8
PPPA+P
Sbjct: 116 PPPANP 121


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PPPASP 8
PPPA+P
Sbjct: 111 PPPANP 116


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PPPASP 8
PPPA+P
Sbjct: 112 PPPANP 117


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PPPASP 8
PPPA+P
Sbjct: 114 PPPANP 119


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PPPASP 8
PPPA+P
Sbjct: 109 PPPANP 114


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PPPASP 8
PPPA+P
Sbjct: 111 PPPANP 116


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PPPASP 8
PPPA+P
Sbjct: 109 PPPANP 114


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 PPPASP 8
PPPA+P
Sbjct: 111 PPPANP 116


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PPPASP 8
PPPA+P
Sbjct: 109 PPPANP 114


>sp|RNH2_SACS2|RIBONUCLEASE HII|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PSPPPASPRS 10
P+PPP RS
Sbjct: 182 PNPPPIIRRS 191


>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSPPPA 6
P PPPA
Sbjct: 163 PVPPPA 168


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PPPASP 8
PPPA+P
Sbjct: 109 PPPANP 114


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 2 SPPPAS 7
SPPPA+
Sbjct: 23 SPPPAA 28




29|Sequence|141|150|ASPRSQYNFI

>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 2 SPRSQYNFI 10
SP+ QYN +
Sbjct: 514 SPKKQYNML 522


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 SPRSQYNFI 10
SP QYN +
Sbjct: 514 SPSKQYNML 522


>sp|HTPX_PICTO|PROTEASE HtpX homolog|Picrophilus torridus (strain ATCC 700027

Query: 1 ASPRSQYNFI 10
SP SQY ++
Sbjct: 74 VSPMSQYGYL 83




30|Sequence|146|155|QYNFIADVVE

>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 QYNFIADVVE 10
+Y FI ++VE
Sbjct: 821 EYEFIGEIVE 830


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 YNFIADVV 9
YNF ADV+
Sbjct: 60 YNFDADVI 67


>sp|LYSY_PYRFU|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 YNFIADVV 9
YNF ADV+
Sbjct: 60 YNFDADVI 67


>sp|PURP_CALMQ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Caldivirga maquilingensis (strain

Query: 1 QYNFIADVVE 10
++NFI +V+E
Sbjct: 53 RFNFIDNVIE 62


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 2 YNFIADVVE 10
+ F+AD+V+
Sbjct: 286 FGFLADIVQ 294


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YNFIADVVE 10
Y+F DV+E
Sbjct: 687 YSFAKDVIE 695




31|Sequence|151|160|ADVVEKTAPA

>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 2 DVVEKTAP 9
DV+E+T P
Sbjct: 246 DVIERTLP 253


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DVVEKTAP 9
D+VEKT P
Sbjct: 345 DLVEKTNP 352


>sp|CAS6_HALMT|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax mediterranei (strain ATCC 33500

Query: 1 ADVVEKTAPA 10
+++VEKT P
Sbjct: 250 SNIVEKTKPG 259


>sp|HIS6_METST|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaera stadtmanae

Query: 1 ADVVEKT 7
ADV+EKT
Sbjct: 67 ADVIEKT 73


>sp|Y1902_METTH|UPF0173 metal-dependent hydrolase MTH_1902|Methanothermobacter

Query: 1 ADVVEKTAPA 10
A++VE+T+P
Sbjct: 207 AELVERTSPG 216


>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 3 VVEKTAPA 10
++EK APA
Sbjct: 335 IIEKLAPA 342


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 ADVVEKTAP 9
ADVVE AP
Sbjct: 204 ADVVEVLAP 212




32|Sequence|156|165|KTAPAVVYIE

>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 KTAPAVVYIE 10
KTAP+V++I+
Sbjct: 214 KTAPSVIFID 223


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KTAPAVVYIE 10
KTAP+V++I+
Sbjct: 214 KTAPSVIFID 223


>sp|Y651_METJA|PUTATIVE protease MJ0651|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KTAPAVVYIE 10
K P VVY+E
Sbjct: 114 KKKPVVVYVE 123


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 2 TAPAVVYIE 10
T P VV+IE
Sbjct: 92 TNPGVVFIE 100




33|Sequence|161|170|VVYIEILDRH

>sp|ENGB_HALWD|PROBABLE GTP-binding protein EngB|Haloquadratum walsbyi (strain DSM 16790

Query: 4 IEILDRH 10
+EI+DRH
Sbjct: 106 VEIIDRH 112


>sp|HBCL2_METS5|4-HYDROXYBUTYRATE--COA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 YIEILDR 9
YIEI+DR
Sbjct: 434 YIEIVDR 440


>sp|IF2B_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 3 YIEILDR 9
Y+E+LDR
Sbjct: 7 YVEMLDR 13


>sp|IF2B_SACI7|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 3 YIEILDR 9
Y+E+LDR
Sbjct: 7 YVEMLDR 13


>sp|IF2B_SACI6|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 3 YIEILDR 9
Y+E+LDR
Sbjct: 7 YVEMLDR 13


>sp|IF2B_SACI4|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 3 YIEILDR 9
Y+E+LDR
Sbjct: 7 YVEMLDR 13


>sp|IF2B_SACI3|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 3 YIEILDR 9
Y+E+LDR
Sbjct: 7 YVEMLDR 13


>sp|IF2B_SACI2|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 3 YIEILDR 9
Y+E+LDR
Sbjct: 7 YVEMLDR 13


>sp|IF2B_SACI1|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 3 YIEILDR 9
Y+E+LDR
Sbjct: 7 YVEMLDR 13


>sp|PUR5_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VYIEILD 8
+YIEILD
Sbjct: 225 IYIEILD 231


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VVYIEILDRH 10
++Y ++DRH
Sbjct: 454 IIYAAVIDRH 463


>sp|PUR5_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VYIEILD 8
+YIE+LD
Sbjct: 225 IYIEVLD 231


>sp|K6PF_PYRHO|ADP-SPECIFIC phosphofructokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VVYIEILDRH 10
+ Y+E L RH
Sbjct: 441 LTYLEFLKRH 450


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 1 VVYIEILDRH 10
V+YI + +RH
Sbjct: 552 VLYINVPERH 561


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YIEILDR 9
YIE+LD+
Sbjct: 392 YIELLDK 398


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 YIEILDR 9
Y+EILD+
Sbjct: 119 YVEILDK 125


>sp|Y1428_METMA|UPF0228 protein MM_1428|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YIEILDRH 10
++EIL RH
Sbjct: 127 FLEILKRH 134


>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VYIEILD 8
+YIE+LD
Sbjct: 225 IYIEVLD 231


>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VYIEILD 8
+Y+EILD
Sbjct: 219 IYMEILD 225




34|Sequence|166|175|ILDRHPFLGR

>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 2 LDRHPFLGR 10
+DR P++GR
Sbjct: 597 IDRVPYIGR 605


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILDR--HPFLGR 10
+LDR HP+LGR
Sbjct: 305 VLDRLGHPWLGR 316


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILDR--HPFLGR 10
+LDR HP+LGR
Sbjct: 305 VLDRFGHPWLGR 316


>sp|END4_THEVO|PROBABLE endonuclease 4|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LDRHPFLGR 10
+DRH +GR
Sbjct: 227 IDRHELIGR 235


>sp|PYRF_PYRAB|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 5 HPFLGR 10
HPF+GR
Sbjct: 85 HPFVGR 90


>sp|FAEHP_ARCFU|BIFUNCTIONAL enzyme Fae/Hps|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 HPFLGR 10
HPF+GR
Sbjct: 160 HPFVGR 165


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 2 LDRHPFLGR 10
L+ HP +GR
Sbjct: 170 LEAHPLVGR 178


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DRHPFLGR 10
DRH F GR
Sbjct: 478 DRHVFTGR 485


>sp|THIM_METHJ|HYDROXYETHYLTHIAZOLE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 HPFLGR 10
HP++GR
Sbjct: 195 HPYMGR 200


>sp|HIS5_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 1 ILDRHPFLG 9
I+D PFLG
Sbjct: 67 IMDGKPFLG 75


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 ILDRHPFLGR 10
+LDR+P + R
Sbjct: 79 VLDRYPVVAR 88


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 DRHPFLG 9
+RHP LG
Sbjct: 258 ERHPLLG 264


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 ILDRHPF 7
++D HPF
Sbjct: 29 VVDSHPF 35


>sp|PRIL_HALSA|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 4 RHPFLG 9
R+PFLG
Sbjct: 7 RYPFLG 12


>sp|PRIL_HALS3|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 4 RHPFLG 9
R+PFLG
Sbjct: 7 RYPFLG 12


>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 1 ILDRHPFLGR 10
+LDRH + R
Sbjct: 103 LLDRHEYADR 112


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus

Query: 1 ILDRHPFLG 9
+LD P+LG
Sbjct: 91 VLDVRPYLG 99


>sp|APGM_THEKO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus kodakarensis (strain ATCC

Query: 1 ILDRHP 6
+LD+HP
Sbjct: 201 VLDKHP 206


>sp|APGM_PYRFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILDRHP 6
+LD+HP
Sbjct: 201 VLDKHP 206




35|Sequence|171|180|PFLGREVPIS

>sp|GLPK_HALVD|GLYCEROL kinase|Haloferax volcanii (strain ATCC 29605

Query: 2 FLGREVPIS 10
FLG EVP++
Sbjct: 243 FLGAEVPVA 251


>sp|GLPK_HALWD|GLYCEROL kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 FLGREVPIS 10
FLG E+P++
Sbjct: 242 FLGAEIPVA 250


>sp|MTTC_METBA|TRIMETHYLAMINE corrinoid protein|Methanosarcina barkeri

Query: 3 LGREVPIS 10
LGR+VPI+
Sbjct: 128 LGRDVPIN 135


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PFLGREVPI 9
P G+EVPI
Sbjct: 281 PITGKEVPI 289


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFLGREVPI 9
P G+EVPI
Sbjct: 301 PVTGKEVPI 309


>sp|MTTC1_METMA|TRIMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LGREVPI 9
LGR+VPI
Sbjct: 128 LGRDVPI 134


>sp|MTTC1_METAC|TRIMETHYLAMINE corrinoid protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LGREVPI 9
LGR+VPI
Sbjct: 128 LGRDVPI 134


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PFLGREVPI 9
P G+E+PI
Sbjct: 282 PITGKEIPI 290


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 PFLGREVPI 9
P G+E+PI
Sbjct: 292 PITGKEIPI 300


>sp|CSG_METJA|S-LAYER protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFLGREV 7
PFLG+E+
Sbjct: 237 PFLGKEM 243


>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC

Query: 2 FLGREVPIS 10
F GRE P++
Sbjct: 51 FAGRETPLT 59


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 2 FLGREVPI 9
FLGREV +
Sbjct: 75 FLGREVEV 82


>sp|GLPK_PYRAB|GLYCEROL kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 LGREVPIS 10
LG E+P+S
Sbjct: 225 LGNEIPVS 232


>sp|RL22_METJA|LARGE ribosomal subunit protein uL22|Methanocaldococcus jannaschii

Query: 3 LGREVPIS 10
+GR +PIS
Sbjct: 22 MGRNIPIS 29


>sp|CSG_METVS|S-LAYER protein|Methanococcus vannielii (strain ATCC 35089

Query: 1 PFLGREVPI 9
PFLG+E+ +
Sbjct: 247 PFLGQEMVV 255


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FLGREVPI 9
F GRE P+
Sbjct: 58 FAGRETPL 65


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC

Query: 2 FLGREVPI 9
F GRE P+
Sbjct: 58 FAGRETPL 65


>sp|MTBC_METBA|DIMETHYLAMINE corrinoid protein|Methanosarcina barkeri

Query: 3 LGREVPI 9
+GR+VPI
Sbjct: 125 IGRDVPI 131


>sp|MTBC3_METMA|DIMETHYLAMINE corrinoid protein 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LGREVPI 9
+GR+VPI
Sbjct: 79 IGRDVPI 85


>sp|MTBC3_METAC|DIMETHYLAMINE corrinoid protein 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LGREVPI 9
+GR+VPI
Sbjct: 125 IGRDVPI 131


>sp|MTBC2_METMA|DIMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LGREVPI 9
+GR+VPI
Sbjct: 126 IGRDVPI 132


>sp|MTBC2_METAC|DIMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LGREVPI 9
+GR+VPI
Sbjct: 126 IGRDVPI 132


>sp|MTBC1_METMA|DIMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LGREVPI 9
+GR+VPI
Sbjct: 126 IGRDVPI 132


>sp|MTBC1_METAC|DIMETHYLAMINE corrinoid protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LGREVPI 9
+GR+VPI
Sbjct: 125 IGRDVPI 131


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GREVPIS 10
G+E+PIS
Sbjct: 370 GKEIPIS 376


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 3 LGREVP 8
LGREVP
Sbjct: 180 LGREVP 185


>sp|RISB_META3|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FLGREVP 8
FLG EVP
Sbjct: 29 FLGAEVP 35


>sp|COFD_METKA|2-PHOSPHO-L-LACTATE transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 PFLGREVPIS 10
PF+GRE P+S
Sbjct: 224 PFIGRE-PVS 232


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 2 FLGREVP 8
FLG EVP
Sbjct: 406 FLGPEVP 412


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 2 FLGREVP 8
FLG EVP
Sbjct: 406 FLGPEVP 412


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 1 PFLGREVP 8
PFL R VP
Sbjct: 200 PFLDRPVP 207


>sp|PYRF_HALMA|OROTIDINE 5'-phosphate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 1 PFLGRE 6
PFLGR+
Sbjct: 123 PFLGRD 128


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 PFLGREVP 8
P LG EVP
Sbjct: 166 PLLGDEVP 173


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 LGREVP 8
LGREVP
Sbjct: 246 LGREVP 251


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PFLGREVPI 9
P GREVP+
Sbjct: 289 PADGREVPV 297


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 FLGREVP 8
FLG EVP
Sbjct: 417 FLGPEVP 423


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 2 FLGREVPIS 10
FLG E PI+
Sbjct: 354 FLGLETPIN 362


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 2 FLGREVP 8
FLG EVP
Sbjct: 399 FLGPEVP 405


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 2 FLGREVPIS 10
FLG E PI+
Sbjct: 354 FLGLETPIN 362


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 FLGREVPIS 10
FLG E PI+
Sbjct: 354 FLGVETPIN 362


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 2 FLGREVP 8
LGRE+P
Sbjct: 315 ILGREIP 321




36|Sequence|176|185|EVPISNGSGF

>sp|END4_HALWD|PROBABLE endonuclease 4|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EVPISNGSGF 10
E P NG GF
Sbjct: 254 ETPNENGKGF 263


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 1 EVPISNGSG 9
E+PIS G G
Sbjct: 248 EIPISMGGG 256


>sp|PURQ_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EVPISNGSG 9
EVPI++G G
Sbjct: 136 EVPIAHGEG 144


>sp|HIS5_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 1 EVPISNGSGF 10
EV SNG+GF
Sbjct: 63 EVLRSNGTGF 72


>sp|PURQ_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Halobacterium salinarum (strain ATCC 700922

Query: 1 EVPISNGSG 9
E+PI++G G
Sbjct: 136 EIPIAHGEG 144


>sp|METK_SULAC|S-ADENOSYLMETHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EVPISNGSGF 10
+VP+SN + F
Sbjct: 155 QVPLSNDTSF 164


>sp|PURQ_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EVPISNGSG 9
E+PI++G G
Sbjct: 139 EIPIAHGEG 147


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EVPISNGSG 9
E+PI +G G
Sbjct: 55 EIPIIDGEG 63


>sp|METK_NATPD|S-ADENOSYLMETHIONINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EVPISNGSGF 10
+VP+SN + F
Sbjct: 153 QVPMSNDTSF 162


>sp|COFE_METMP|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VPISNGSG 9
VP +NG+G
Sbjct: 228 VPFTNGTG 235




37|Sequence|181|190|NGSGFVVAAD

>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 GSGFVVA 8
G+GFVVA
Sbjct: 1242 GAGFVVA 1248


>sp|SPEE_AERPE|POLYAMINE aminopropyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 GFVVAAD 10
GFVVA+D
Sbjct: 243 GFVVASD 249


>sp|RS6E_METBF|SMALL ribosomal subunit protein eS6|Methanosarcina barkeri (strain

Query: 1 NGSGFVVAAD 10
+GSGFV+ D
Sbjct: 57 DGSGFVMKPD 66


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 1 NGSGFVVAAD 10
NG GF + D
Sbjct: 356 NGKGFAIGCD 365


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 NGSGFVV 7
NG+GF+V
Sbjct: 521 NGAGFIV 527


>sp|RS6E_METMA|SMALL ribosomal subunit protein eS6|Methanosarcina mazei (strain ATCC

Query: 1 NGSGFVVAAD 10
+GSGFV+ D
Sbjct: 57 DGSGFVMKPD 66


>sp|RS6E_METAC|SMALL ribosomal subunit protein eS6|Methanosarcina acetivorans (strain

Query: 1 NGSGFVVAAD 10
+GSGFV+ D
Sbjct: 57 DGSGFVMKPD 66




38|Sequence|186|195|VVAADGLIVT

>sp|HIS5_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri

Query: 1 VVAADGLIV 9
++AADGLI+
Sbjct: 37 ILAADGLIL 45


>sp|OGT_METKA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 VVAADGL 7
VVAADGL
Sbjct: 101 VVAADGL 107


>sp|RNZ_METKA|RIBONUCLEASE Z|Methanopyrus kandleri (strain AV19 /

Query: 1 VVAADGLIV 9
VVA DGL+V
Sbjct: 267 VVARDGLMV 275


>sp|HIS5_METMA|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina mazei (strain

Query: 1 VVAADGLIV 9
++AADG+I+
Sbjct: 37 ILAADGIIL 45


>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 3 AADGLIV 9
AADG+IV
Sbjct: 74 AADGIIV 80


>sp|NADK_THEON|NAD kinase|Thermococcus onnurineus (strain NA1)

Query: 2 VAADGLIVT 10
+ ADGLIV+
Sbjct: 164 IRADGLIVS 172


>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VAADGLIVT 10
V ADGL+V+
Sbjct: 164 VRADGLVVS 172


>sp|NADK_PYRAB|NAD kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 VAADGLIV 9
V ADGL+V
Sbjct: 164 VRADGLVV 171


>sp|THI4_HALMA|THIAMINE thiazole synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 VAADGLIVT 10
+A DGL+VT
Sbjct: 248 LAHDGLVVT 256




39|Sequence|191|200|GLIVTNAHVV

>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GLIVTNAHVV 10
G+I+TN++++
Sbjct: 54 GMIITNSYII 63


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 1 GLIVTNAHVV 10
G+I+TN++++
Sbjct: 54 GIIITNSYII 63


>sp|ARGC_ARCFU|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IVTNAHV 9
I+TNAHV
Sbjct: 233 ILTNAHV 239


>sp|RL15E_METAR|LARGE ribosomal subunit protein eL15|Methanocella arvoryzae (strain DSM

Query: 1 GLIVTNAHV 9
G+IV AHV
Sbjct: 60 GIIVARAHV 68


>sp|MPTA_METST|GTP cyclohydrolase MptA|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 IVTNAH 8
IVTNAH
Sbjct: 246 IVTNAH 251


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLIVTNAHVV 10
G I+TNA+ V
Sbjct: 50 GQIITNAYFV 59


>sp|NFI_THEVO|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma volcanium (strain

Query: 1 GLIVTNAHV 9
G+ +TN H+
Sbjct: 91 GITITNGHI 99


>sp|RL10_METTH|LARGE ribosomal subunit protein uL10|Methanothermobacter

Query: 2 LIVTNAHVV 10
++V+N HVV
Sbjct: 151 IVVSNDHVV 159


>sp|GMSS2_HALMA|GLUTAMATE mutase sigma subunit 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 GLIVTNAHVV 10
G+I ++AHVV
Sbjct: 7 GVIGSDAHVV 16


>sp|COFH_METM6|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C6 /

Query: 3 IVTNAH 8
+VTNAH
Sbjct: 197 VVTNAH 202


>sp|COFH_METM5|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C5 /

Query: 3 IVTNAH 8
+VTNAH
Sbjct: 197 VVTNAH 202


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 GLIVTNAHV 9
G V+NAHV
Sbjct: 579 GSCVSNAHV 587


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 2 LIVTNAHVV 10
+++TNA+++
Sbjct: 55 IVITNAYII 63


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 GLIVTNAHVV 10
G V+NAH++
Sbjct: 558 GSCVSNAHIL 567


>sp|GMSS1_HALMA|GLUTAMATE mutase sigma subunit 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 GLIVTNAHVV 10
G+I ++AHVV
Sbjct: 13 GVIGSDAHVV 22




40|Sequence|196|205|NAHVVADRRR

>sp|KTHY_METMP|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NAHVVADR 8
NAHVV+DR
Sbjct: 78 NAHVVSDR 85


>sp|TOP6A_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 3 HVVADRR 9
H+ ADRR
Sbjct: 147 HITADRR 153


>sp|TOP6A_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HVVADRR 9
H+ ADRR
Sbjct: 147 HITADRR 153


>sp|TOP6A_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 HVVADRR 9
H+ ADRR
Sbjct: 147 HITADRR 153


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NAHVVADRRR 10
+AHV RRR
Sbjct: 48 SAHVAGGRRR 57


>sp|TOP6A_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 3 HVVADRR 9
H+ ADRR
Sbjct: 150 HITADRR 156


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 AHVVADR 8
+H++ADR
Sbjct: 387 SHIIADR 393




41|Sequence|201|210|ADRRRVRVRL

>sp|RS10_PYRCJ|SMALL ribosomal subunit protein uS10|Pyrobaculum calidifontis (strain

Query: 1 ADRRRVRVRL 10
A RR+VR+RL
Sbjct: 4 ASRRKVRIRL 13


>sp|RS10_PYRAE|SMALL ribosomal subunit protein uS10|Pyrobaculum aerophilum (strain

Query: 1 ADRRRVRVRL 10
A RR+VR+RL
Sbjct: 4 ASRRKVRIRL 13


>sp|RS10_PYRNV|SMALL ribosomal subunit protein uS10|Pyrobaculum neutrophilum (strain

Query: 1 ADRRRVRVRL 10
A RR+VR+RL
Sbjct: 4 ASRRKVRIRL 13


>sp|RS10_PYRIL|SMALL ribosomal subunit protein uS10|Pyrobaculum islandicum (strain DSM

Query: 1 ADRRRVRVRL 10
A RR+VR+RL
Sbjct: 4 AARRKVRIRL 13


>sp|RS10_PYRAR|SMALL ribosomal subunit protein uS10|Pyrobaculum arsenaticum (strain

Query: 1 ADRRRVRVRL 10
A RR+VR+RL
Sbjct: 4 AARRKVRIRL 13




42|Sequence|206|215|VRVRLLSGDT

>sp|RS28_THEVO|SMALL ribosomal subunit protein eS28|Thermoplasma volcanium (strain

Query: 1 VRVRLLSG 8
V+VR+LSG
Sbjct: 26 VKVRILSG 33


>sp|RS28_PICTO|SMALL ribosomal subunit protein eS28|Picrophilus torridus (strain ATCC

Query: 1 VRVRLLSG 8
V+VR+LSG
Sbjct: 26 VKVRVLSG 33




43|Sequence|211|220|LSGDTYEAVV

>sp|DPHB_METM6|DIPHTHINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 LSGDTYEAVV 10
+SG+TY AVV
Sbjct: 195 ISGETYAAVV 204


>sp|DPHB_METM7|DIPHTHINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 LSGDTYEAVV 10
+SG+TY AVV
Sbjct: 195 ISGETYAAVV 204


>sp|Y1079_METJA|UNCHARACTERIZED protein MJ1079|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSGDTYEAVV 10
L+G+ YEA+V
Sbjct: 85 LNGNGYEAIV 94


>sp|TRPE2_HALMA|ANTHRANILATE synthase component 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 LSGDTYEAVV 10
LSGD Y+ V+
Sbjct: 264 LSGDIYQGVI 273


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 2 SGDTYEAVV 10
SGD YE V+
Sbjct: 534 SGDVYEIVL 542


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 3 GDTYEAV 9
GD YEAV
Sbjct: 162 GDVYEAV 168


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 3 GDTYEAV 9
GD YEAV
Sbjct: 158 GDVYEAV 164


>sp|HEM3_NITMS|PROBABLE porphobilinogen deaminase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 SGDTYEAVV 10
SG+ Y+A+V
Sbjct: 156 SGENYDAIV 164


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GDTYEAV 9
GD YEAV
Sbjct: 358 GDRYEAV 364


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 GDTYEAV 9
GD YEAV
Sbjct: 358 GDRYEAV 364


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 1 LSGDTYEAVV 10
LSGD Y +++
Sbjct: 355 LSGDPYLSII 364


>sp|HTR1_HALSA|SENSORY rhodopsin I transducer|Halobacterium salinarum (strain ATCC 700922

Query: 2 SGDTYEAV 9
+GDT EAV
Sbjct: 229 AGDTVEAV 236


>sp|HTR1_HALS3|SENSORY rhodopsin I transducer|Halobacterium salinarum (strain ATCC 29341

Query: 2 SGDTYEAV 9
+GDT EAV
Sbjct: 229 AGDTVEAV 236


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LSGDTYEAV 9
LSG TYE +
Sbjct: 540 LSGRTYEFI 548


>sp|IF2A_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 3 GDTYEAVV 10
GD Y+A+V
Sbjct: 134 GDAYDALV 141


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 1 LSGDTYEAVV 10
LSGDT+ V
Sbjct: 306 LSGDTFSCFV 315


>sp|GATD_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcoides burtonii (strain DSM

Query: 3 GDTYEAVV 10
G+TYE +V
Sbjct: 15 GNTYEGIV 22


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 1 LSGDTYEAVV 10
LSGDT+ V
Sbjct: 306 LSGDTFSCFV 315


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 1 LSGDTYEAVV 10
LSGDT+ V
Sbjct: 306 LSGDTFSCFV 315




44|Sequence|216|225|YEAVVTAVDP

>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 1 YEAVVTAVDP 10
YEAV VDP
Sbjct: 305 YEAVAKQVDP 314


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YEAVVTAVDP 10
YEAV A DP
Sbjct: 124 YEAVKRASDP 133


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 2 EAVVTAVDP 10
EA+ +AVDP
Sbjct: 200 EAIESAVDP 208


>sp|PSB1_AERPE|PROTEASOME subunit beta 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 EAVVTAVDP 10
EA+V +DP
Sbjct: 103 EAIVGGIDP 111


>sp|PCNA_THEAC|DNA polymerase sliding clamp|Thermoplasma acidophilum (strain ATCC

Query: 5 VTAVDP 10
VTAVDP
Sbjct: 36 VTAVDP 41


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 1 YEAVVTAVDP 10
YE V AV+P
Sbjct: 330 YEVVAAAVEP 339


>sp|SUCC1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 1 YEAVVTAVDP 10
YEA +T ++P
Sbjct: 183 YEAELTEINP 192


>sp|PCNA_THEVO|DNA polymerase sliding clamp|Thermoplasma volcanium (strain ATCC

Query: 5 VTAVDP 10
VTAVDP
Sbjct: 36 VTAVDP 41




45|Sequence|221|230|TAVDPVADIA

>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 TAVDPVADI 9
TA+DPV +I
Sbjct: 319 TAIDPVMNI 327


>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 TAVDPVADI 9
TA+DPV +I
Sbjct: 319 TAIDPVMNI 327


>sp|MFNA_METMP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 TAVDPVADI 9
TA+DPV +I
Sbjct: 319 TAIDPVMNI 327


>sp|MFNA_METVS|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus vannielii

Query: 1 TAVDPVADI 9
TA+DPV +I
Sbjct: 319 TAIDPVINI 327


>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 3 VDPVADIA 10
VDP+AD+A
Sbjct: 171 VDPIADLA 178


>sp|G3P_METS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 TAVDPVADI 9
+ +DP+ADI
Sbjct: 151 STIDPIADI 159


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TAVDPVAD 8
T +DP+AD
Sbjct: 629 TEIDPIAD 636


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TAVDPVAD 8
TAVD +AD
Sbjct: 503 TAVDVIAD 510


>sp|FLAB3_NATMM|FLAGELLIN B3|Natrialba magadii (strain ATCC 43099

Query: 2 AVDPVADI 9
+ DPVADI
Sbjct: 345 SFDPVADI 352




46|Sequence|226|235|VADIATLRIQ

>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 2 ADIATLRIQ 10
ADI T+R++
Sbjct: 354 ADIPTIRVE 362




47|Sequence|231|240|TLRIQTKEPL

>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 1 TLRIQTKEPL 10
T RI+TK PL
Sbjct: 619 TYRIETKTPL 628


>sp|RS6E_NANEQ|SMALL ribosomal subunit protein eS6|Nanoarchaeum equitans (strain

Query: 2 LRIQTKEP 9
++I+TKEP
Sbjct: 20 IQIETKEP 27




48|Sequence|236|245|TKEPLPTLPL

>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 TKEPLPT 7
T EP+PT
Sbjct: 446 TDEPIPT 452


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum (strain

Query: 4 PLPTLPL 10
PLP LPL
Sbjct: 377 PLPYLPL 383


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 TKEPLPTLP 9
TKE +P LP
Sbjct: 359 TKELVPVLP 367


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEPLPTLPL 10
KEPL LP+
Sbjct: 162 KEPLKALPV 170


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 1 TKEPLPTLPL 10
T++ LPT+PL
Sbjct: 299 TQDGLPTVPL 308


>sp|HJC_METTH|CROSSOVER junction endodeoxyribonuclease Hjc|Methanothermobacter

Query: 1 TKEPLPTL 8
TK+PLP +
Sbjct: 33 TKKPLPDI 40


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 2 KEPLPTLP 9
+EPL TLP
Sbjct: 229 EEPLDTLP 236




49|Sequence|241|250|PTLPLGRSAD

>sp|CAS1A_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LPLGRSA 9
LPLGRSA
Sbjct: 82 LPLGRSA 88


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LPLGRS 8
LPLGRS
Sbjct: 97 LPLGRS 102


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 3 LPLGRSAD 10
LPLG S+D
Sbjct: 90 LPLGYSSD 97


>sp|RL37A_METST|LARGE ribosomal subunit protein eL43|Methanosphaera stadtmanae (strain

Query: 1 PTLPLGRSA 9
PT P+G+ A
Sbjct: 70 PTTPMGKVA 78




50|Sequence|246|255|GRSADVRQGE

>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 1 GRSADVR 7
GR ADVR
Sbjct: 379 GREADVR 385


>sp|GAL1_PYRHO|GALACTOKINASE horikoshii (strain ATCC 700860

Query: 1 GRSADVRQGE 10
G S +VR+GE
Sbjct: 215 GSSKEVREGE 224


>sp|RTCA_SACI7|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 5 DVRQGE 10
DVRQGE
Sbjct: 223 DVRQGE 228


>sp|RTCA_SACI4|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 5 DVRQGE 10
DVRQGE
Sbjct: 223 DVRQGE 228


>sp|RTCA_SACI3|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 5 DVRQGE 10
DVRQGE
Sbjct: 223 DVRQGE 228


>sp|RTCA_SACI2|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 5 DVRQGE 10
DVRQGE
Sbjct: 223 DVRQGE 228


>sp|RTCA_SACI1|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 5 DVRQGE 10
DVRQGE
Sbjct: 223 DVRQGE 228


>sp|RTCA_SACI6|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 5 DVRQGE 10
DVRQGE
Sbjct: 223 DVRQGE 228


>sp|PDXT_METTP|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanothrix thermoacetophila

Query: 1 GRSADVRQG 9
GR+ VRQG
Sbjct: 154 GRTVAVRQG 162


>sp|RTCA_SACS2|RNA 3'-terminal phosphate cyclase|Saccharolobus solfataricus (strain

Query: 5 DVRQGE 10
DVRQGE
Sbjct: 223 DVRQGE 228




51|Sequence|251|260|VRQGEFVVAM

>sp|LEUD1_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 VRQGEFVVA 9
V++G+FVVA
Sbjct: 46 VKKGDFVVA 54


>sp|Y1940_AERPE|UNCHARACTERIZED protein APE_1940.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 VRQGEFVVAM 10
VR+G+ VVA+
Sbjct: 93 VREGDLVVAI 102


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RQGEFVVAM 10
R+G FVVA+
Sbjct: 857 REGHFVVAV 865


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 2 RQGEFVVAM 10
R GE VVAM
Sbjct: 366 RSGETVVAM 374


>sp|Y1508_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 VRQGEFVVAM 10
+ +GEFV+ M
Sbjct: 28 IEEGEFVMIM 37


>sp|Y3508_METJA|PROBABLE helicase MJECL08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VRQGEFVV 8
+++GEFV+
Sbjct: 33 IKKGEFVI 40


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VRQGEFVV 8
VR+GE VV
Sbjct: 112 VREGELVV 119


>sp|Y1786_ARCFU|UNCHARACTERIZED protein AF_1786|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GEFVVAM 10
GEFVVA+
Sbjct: 63 GEFVVAV 69


>sp|HERA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 1 VRQGEFVVA 9
+R GE+V+A
Sbjct: 23 IRFGEYVIA 31


>sp|IF2A_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 3 QGEFVVA 9
+GEFVVA
Sbjct: 11 EGEFVVA 17


>sp|LEUD_METTH|3-ISOPROPYLMALATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 1 VRQGEFVVA 9
V+ G+F+VA
Sbjct: 47 VKPGDFIVA 55


>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VRQGEFVVAM 10
VR G+FVV +
Sbjct: 171 VRMGKFVVTV 180


>sp|PPS_THEON|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus onnurineus (strain NA1)

Query: 1 VRQGEFVVAM 10
VR G+FV+ +
Sbjct: 171 VRMGKFVITI 180


>sp|IF2A_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain

Query: 3 QGEFVVA 9
+GEFVVA
Sbjct: 11 EGEFVVA 17


>sp|IF2A_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 QGEFVVA 9
+GEFVVA
Sbjct: 11 EGEFVVA 17


>sp|IF2A_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 QGEFVVA 9
+GEFVVA
Sbjct: 11 EGEFVVA 17




52|Sequence|256|265|FVVAMGSPFA

>sp|HEM4_ARCFU|PUTATIVE uroporphyrinogen-III synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 FVVAMGSPFA 10
FVVA+G P A
Sbjct: 187 FVVAIGPPTA 196


>sp|MCAL_HALMA|L-MALYL-COA/BETA-METHYLMALYL-COA lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 VVAMGSPF 9
+VA+G PF
Sbjct: 210 IVAIGGPF 217




53|Sequence|261|270|GSPFALQNTI

>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 1 GSPFALQN 8
GSPFA++N
Sbjct: 265 GSPFAIRN 272


>sp|ASPD_METBU|L-ASPARTATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GSPFALQNTI 10
G+P+ +QN I
Sbjct: 155 GAPYIVQNNI 164




54|Sequence|266|275|LQNTITSGIV

>sp|RS3A_METB6|SMALL ribosomal subunit protein eS1|Methanoregula boonei (strain DSM

Query: 1 LQNTITSGIV 10
L+N IT+G+V
Sbjct: 138 LRNAITAGLV 147


>sp|AIPS_PYRHO|ARCHAETIDYLINOSITOL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LQNTITSGIV 10
LQN I +GI+
Sbjct: 47 LQNQILAGII 56


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LQNTITSGIV 10
L NT+ +G+V
Sbjct: 134 LSNTVLAGVV 143


>sp|FMDC_METBF|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanosarcina barkeri

Query: 1 LQNTITSGIV 10
++N+ITSG V
Sbjct: 259 MENSITSGEV 268




55|Sequence|271|280|TSGIVSSAQR

>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 2 SGIVSSAQR 10
SG+V++AQR
Sbjct: 199 SGMVTAAQR 207




56|Sequence|276|285|SSAQRPARDL

>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SSAQRPARDL 10
S +RPARD+
Sbjct: 367 SKLERPARDI 376


>sp|FLPA_HALLT|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halorubrum lacusprofundi (strain

Query: 3 AQRPARDL 10
A RPARDL
Sbjct: 92 APRPARDL 99


>sp|PYRC_METKA|DIHYDROOROTASE kandleri (strain AV19 /

Query: 3 AQRPARDL 10
A+RPAR+L
Sbjct: 188 AERPARNL 195


>sp|FLPA_HALWD|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloquadratum walsbyi (strain DSM

Query: 3 AQRPARDL 10
A RP RDL
Sbjct: 94 APRPVRDL 101




57|Sequence|281|290|PARDLGLPQT

>sp|Y1234_STAMF|UPF0200 protein Smar_1234|Staphylothermus marinus (strain ATCC 43588

Query: 2 ARDLGLP 8
ARDLGLP
Sbjct: 23 ARDLGLP 29


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 ARDLGLP 8
ARDLG+P
Sbjct: 163 ARDLGIP 169


>sp|RS8_METIG|SMALL ribosomal subunit protein uS8|Methanotorris igneus (Methanococcus

Query: 1 PARDLGL 7
PARD GL
Sbjct: 95 PARDFGL 101


>sp|HEM1_PYRIL|GLUTAMYL-TRNA reductase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 DLGLPQT 10
DLG+PQT
Sbjct: 261 DLGVPQT 267


>sp|NADE_HALSA|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ARDLGLPQ 9
ARDLG+P+
Sbjct: 185 ARDLGVPE 192


>sp|NADE_HALS3|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ARDLGLPQ 9
ARDLG+P+
Sbjct: 185 ARDLGVPE 192


>sp|HEM1_PYRAE|GLUTAMYL-TRNA reductase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 DLGLPQT 10
DLG+PQT
Sbjct: 261 DLGVPQT 267


>sp|RS8_METKA|SMALL ribosomal subunit protein uS8|Methanopyrus kandleri (strain AV19 /

Query: 1 PARDLGL 7
PARD GL
Sbjct: 95 PARDFGL 101


>sp|Y1395_ARCFU|UPF0200/UPF0201 protein AF_1395|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ARDLGLP 8
AR+LGLP
Sbjct: 25 ARELGLP 31


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 2 ARDLGLP 8
ARDLG+P
Sbjct: 403 ARDLGIP 409


>sp|HEM1_PYRNV|GLUTAMYL-TRNA reductase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 DLGLPQT 10
DLG+PQT
Sbjct: 261 DLGVPQT 267


>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PARDLGLP 8
PA LGLP
Sbjct: 330 PAEHLGLP 337


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ARDLGLPQ 9
+R+LGLP+
Sbjct: 19 SRELGLPE 26


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PARDLGLP 8
PA LGLP
Sbjct: 330 PAEHLGLP 337


>sp|Y1556_METMJ|UPF0200 protein Memar_1556|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ARDLGLP 8
ARDLG+P
Sbjct: 21 ARDLGIP 27


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 2 ARDLGLP 8
A+DLGLP
Sbjct: 98 AKDLGLP 104


>sp|NADE_PYRHO|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ARDLGLP 8
A+DLG+P
Sbjct: 218 AKDLGIP 224


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 PARDLGLP 8
PA LGLP
Sbjct: 330 PAEHLGLP 337


>sp|RS8_METJA|SMALL ribosomal subunit protein uS8|Methanocaldococcus jannaschii (strain

Query: 1 PARDLGL 7
PARD G+
Sbjct: 95 PARDFGI 101


>sp|RS8_ARCFU|SMALL ribosomal subunit protein uS8|Archaeoglobus fulgidus (strain ATCC

Query: 1 PARDLGL 7
PARD G+
Sbjct: 94 PARDFGI 100


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PARDLGLPQ 9
PA DL LP+
Sbjct: 378 PAEDLNLPR 386


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PARDLGLP 8
PA LGLP
Sbjct: 330 PAEHLGLP 337


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 ARDLGLPQT 10
AR+LG P+T
Sbjct: 54 ARNLGTPET 62


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 RDLGLP 8
RDLGLP
Sbjct: 325 RDLGLP 330


>sp|ASSY_NATPD|ARGININOSUCCINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PARDLGLPQT 10
P R+LGL +T
Sbjct: 142 PVRELGLTRT 151


>sp|RS8_THEPD|SMALL ribosomal subunit protein uS8|Thermofilum pendens (strain DSM 2475

Query: 1 PARDLGL 7
P+RD+GL
Sbjct: 94 PSRDVGL 100


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PARDLGLP 8
PA LGLP
Sbjct: 329 PAEHLGLP 336


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PARDLGLP 8
PA LGLP
Sbjct: 329 PAEHLGLP 336


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PARDLGLP 8
PA LGLP
Sbjct: 329 PAEHLGLP 336


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PARDLGLP 8
PA LGLP
Sbjct: 329 PAEHLGLP 336


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PARDLGLP 8
PA LGLP
Sbjct: 329 PAEHLGLP 336


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PARDLGLP 8
PA LGLP
Sbjct: 329 PAEHLGLP 336


>sp|G3P_PYRAE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ARDLGLPQ 9
ARDLG P+
Sbjct: 267 ARDLGRPR 274


>sp|GUAAB_THEKO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermococcus

Query: 2 ARDLGLPQ 9
A++LGLP+
Sbjct: 172 AKELGLPE 179


>sp|GUAAB_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus furiosus

Query: 2 ARDLGLPQ 9
A++LGLP+
Sbjct: 178 AKELGLPE 185


>sp|TF2B1_HALSA|TRANSCRIPTION initiation factor IIB 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 RDLGLP 8
RDLGLP
Sbjct: 192 RDLGLP 197


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PARDLGLPQ 9
PA DL LP+
Sbjct: 378 PAEDLQLPR 386


>sp|G3P_PYRCJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ARDLGLPQ 9
ARDLG P+
Sbjct: 267 ARDLGRPR 274


>sp|G3P_PYRAR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ARDLGLPQ 9
ARDLG P+
Sbjct: 267 ARDLGRPR 274


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ARDLGLPQT 10
A+++GLP T
Sbjct: 286 AKEVGLPTT 294


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PARDLGLPQ 9
PA DL LP+
Sbjct: 378 PAEDLHLPR 386


>sp|HEM12_PYRAR|GLUTAMYL-TRNA reductase 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 DLGLPQT 10
DLG+PQ+
Sbjct: 261 DLGVPQS 267


>sp|G3P_PYRNV|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 ARDLGLPQ 9
ARDLG P+
Sbjct: 267 ARDLGRPR 274


>sp|G1PDH_IGNH4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RDLGLPQT 10
RDL LP T
Sbjct: 295 RDLNLPTT 302


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 2 ARDLGLP 8
A+DLG+P
Sbjct: 406 AKDLGIP 412


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 2 ARDLGLP 8
A+DLG+P
Sbjct: 406 AKDLGIP 412


>sp|GUAAB_METJA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocaldococcus

Query: 2 ARDLGLPQT 10
A++LGLP +
Sbjct: 173 AKELGLPDS 181


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 2 ARDLGLPQ 9
AR LG+PQ
Sbjct: 135 ARTLGVPQ 142


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ARDLGLP 8
AR+LG+P
Sbjct: 443 ARELGIP 449


>sp|GGGPS_METLZ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 3 RDLGLPQT 10
RD GLP T
Sbjct: 55 RDAGLPLT 62


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ARDLGLPQ 9
AR LG+PQ
Sbjct: 135 ARTLGVPQ 142


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ARDLGLPQ 9
AR LG+PQ
Sbjct: 135 ARTLGVPQ 142


>sp|SYR_HALMA|ARGININE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PARDLGLPQ 9
PA DLG+ +
Sbjct: 23 PAEDLGIEE 31


>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter thermautotrophicus

Query: 2 ARDLGLPQ 9
A+D G+PQ
Sbjct: 146 AKDYGVPQ 153


>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PARDLGLPQ 9
P+R++ LP+
Sbjct: 285 PSREINLPE 293


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 3 RDLGLPQT 10
RDL LP T
Sbjct: 475 RDLNLPYT 482




58|Sequence|286|295|GLPQTNVEYI

>sp|IF2B_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 GLPQTNVE 8
GLP TN+E
Sbjct: 106 GLPDTNLE 113


>sp|IF2B_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 GLPQTNVE 8
GLP TN+E
Sbjct: 106 GLPDTNLE 113


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 2 LPQTNVE 8
LPQ NVE
Sbjct: 247 LPQNNVE 253


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLPQTNVEYI 10
G P+ +V+YI
Sbjct: 38 GFPEKSVDYI 47


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 LPQTNVEYI 10
LP+ N++Y+
Sbjct: 1087 LPEKNIDYL 1095


>sp|REG9_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1916|Pyrococcus horikoshii

Query: 1 GLPQTNVEY 9
G+P+T V Y
Sbjct: 32 GIPRTTVHY 40


>sp|REG9_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB16920|Pyrococcus abyssi

Query: 1 GLPQTNVEY 9
G+P+T V Y
Sbjct: 32 GIPRTTVHY 40


>sp|REG9_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF0250|Pyrococcus furiosus

Query: 1 GLPQTNVEY 9
G+P+T V Y
Sbjct: 32 GIPRTTVHY 40


>sp|Y1969_ARCFU|PROTEIN AF_1969|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPQTNVEY 9
LPQ VEY
Sbjct: 140 LPQVAVEY 147


>sp|Y360_CALMQ|PROTEIN Cmaq_0360|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 LPQTNVEY 9
LPQ VEY
Sbjct: 149 LPQVPVEY 156


>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 2 LPQTNVEYI 10
LPQ V+Y+
Sbjct: 231 LPQMKVDYV 239


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 2 LPQTNVEYI 10
LP++ VEY+
Sbjct: 2 LPESLVEYV 10


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLPQTNVEYI 10
G P+T +YI
Sbjct: 67 GTPETKTKYI 76


>sp|Y1654_ARCFU|UNCHARACTERIZED protein AF_1654|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPQTNVEYI 10
+P+TN+E +
Sbjct: 279 MPETNLEMV 287




59|Sequence|291|300|NVEYIQTDAA

>sp|ENGB_ARCFU|PROBABLE GTP-binding protein EngB|Archaeoglobus fulgidus (strain ATCC

Query: 2 VEYIQTDA 9
VEYI+T+A
Sbjct: 75 VEYIETNA 82


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 NVEYIQTDA 9
NVEY+Q A
Sbjct: 946 NVEYLQASA 954


>sp|CCA_HALLT|CCA-ADDING enzyme|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 EYIQTDAA 10
EY+++DAA
Sbjct: 412 EYLESDAA 419




60|Sequence|296|305|QTDAAIDFGN

>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QTDAAIDFGN 10
+TDA I F N
Sbjct: 387 ETDATISFDN 396


>sp|CCA_THEAC|CCA-ADDING enzyme|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TDAAIDFGN 10
TD A+DF N
Sbjct: 344 TDNAVDFVN 352


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 TDAAIDFGN 10
TDA I F N
Sbjct: 388 TDATISFDN 396


>sp|HISX_METTH|HISTIDINOL dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 DAAIDFGN 10
D A+DF N
Sbjct: 311 DEAVDFSN 318




61|Sequence|301|310|IDFGNSGGPL

>sp|GATB_ARCFU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Archaeoglobus fulgidus (strain ATCC

Query: 1 IDFGNSGGPL 10
ID+ SG PL
Sbjct: 145 IDYNRSGAPL 154


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DFGNSGG 8
DFG+SGG
Sbjct: 305 DFGDSGG 311


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 IDFGNSGGPL 10
ID GNSG L
Sbjct: 87 IDLGNSGTTL 96


>sp|AROA_METVS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 IDFGNSGGPL 10
ID GNSG L
Sbjct: 83 IDIGNSGTTL 92


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 IDFGNSGGPL 10
ID GNSG L
Sbjct: 87 IDIGNSGTTL 96


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IDFGNSGGPL 10
+DF GGP
Sbjct: 437 LDFEKQGGPF 446


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 4 GNSGGP 9
GN+GGP
Sbjct: 624 GNAGGP 629


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DFGNSGGP 9
DF GGP
Sbjct: 898 DFAQGGGP 905


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DFGNSGGP 9
DF GGP
Sbjct: 894 DFAQGGGP 901


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 2 DFGNSGG 8
D+G+SGG
Sbjct: 305 DYGDSGG 311


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 2 DFGNSGG 8
D+G+SGG
Sbjct: 305 DYGDSGG 311


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 1 IDFGNSGGPL 10
+D+ SG PL
Sbjct: 133 VDYNRSGTPL 142


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 1 IDFGNSGGPL 10
+D+ SG PL
Sbjct: 133 VDYNRSGTPL 142


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 1 IDFGNSGGPL 10
+D+ SG PL
Sbjct: 133 VDYNRSGTPL 142


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 1 IDFGNSGGPL 10
+D+ SG PL
Sbjct: 133 VDYNRSGTPL 142


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 1 IDFGNSGGPL 10
+D+ SG PL
Sbjct: 133 VDYNRSGTPL 142


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 1 IDFGNSGGPL 10
+D+ SG PL
Sbjct: 136 VDYNRSGTPL 145


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 1 IDFGNSGGPL 10
+D+ SG PL
Sbjct: 133 VDYNRSGTPL 142


>sp|SUI1_PYRAE|PROTEIN translation factor SUI1 homolog|Pyrobaculum aerophilum (strain

Query: 1 IDFGNS 6
+DFGNS
Sbjct: 52 VDFGNS 57


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DFGNSGGP 9
DF GGP
Sbjct: 903 DFAQGGGP 910


>sp|HEM1_HYPBU|GLUTAMYL-TRNA reductase|Hyperthermus butylicus (strain DSM 5456

Query: 1 IDFGNSGGP 9
I +GN G P
Sbjct: 148 ISYGNVGAP 156


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DFGNSGGP 9
DF GGP
Sbjct: 899 DFAQGGGP 906


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 DFGNSGGP 9
DF GGP
Sbjct: 899 DFAQGGGP 906


>sp|AROA_METM7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 IDFGNSGGPL 10
+D GNSG L
Sbjct: 83 VDIGNSGTTL 92


>sp|HIS3_NITMS|PHOSPHORIBOSYL-AMP cyclohydrolase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 IDFGNSGG 8
IDF SGG
Sbjct: 8 IDFEKSGG 15


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 1 IDFGNSGGPL 10
+D+ SG PL
Sbjct: 144 LDYNRSGTPL 153


>sp|AROA_METM5|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 IDFGNSGGPL 10
+D GNSG L
Sbjct: 83 VDIGNSGTTL 92


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 IDFGNSGGPL 10
+D GNSG L
Sbjct: 83 VDIGNSGTTL 92


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 IDFGNSGGPL 10
ID GNSG L
Sbjct: 84 IDVGNSGTTL 93


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 IDFGNSGGPL 10
+D GNSG L
Sbjct: 86 VDIGNSGTTL 95


>sp|NASB_HALMT|PROBABLE nitrate transporter|Haloferax mediterranei (strain ATCC 33500

Query: 3 FGNSGGPL 10
FGN GPL
Sbjct: 157 FGNWSGPL 164


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 IDFGNSGGPL 10
+D GNSG L
Sbjct: 83 VDIGNSGTTL 92


>sp|AROC_KORCO|CHORISMATE synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 IDFGNSGGPL 10
I FG S GP+
Sbjct: 13 ISFGESHGPV 22


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IDFGNSGG 8
ID G SGG
Sbjct: 219 IDVGGSGG 226


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 4 GNSGGP 9
GN GGP
Sbjct: 499 GNPGGP 504


>sp|DUT_METBU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanococcoides

Query: 1 IDFGNSG 7
+DF NSG
Sbjct: 51 VDFDNSG 57


>sp|IDI2_META3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IDFGNSGG 8
ID G SGG
Sbjct: 223 IDVGGSGG 230


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 1 IDFGNSGG 8
+DFG +GG
Sbjct: 118 VDFGINGG 125


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 1 IDFGNSGG 8
+DFG +GG
Sbjct: 118 VDFGINGG 125


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 4 GNSGGP 9
GN GGP
Sbjct: 501 GNPGGP 506




62|Sequence|306|315|SGGPLVNLDG

>sp|TRM14_PYRFU|TRNA (guanine(6)-N2)-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 2 GGPLVNLD 9
G PLVNLD
Sbjct: 154 GTPLVNLD 161


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 SGGPLVNLDG 10
S G LVNLDG
Sbjct: 240 SYGNLVNLDG 249


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SGGPLVNLD 9
SG P++NLD
Sbjct: 53 SGHPVINLD 61


>sp|CH60_METHJ|CHAPERONIN GroEL|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SGGPLVNLDG 10
+GGP+V DG
Sbjct: 43 AGGPVVTNDG 52


>sp|BIOW_META3|6-CARBOXYHEXANOATE--COA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GGPLVNLDG 10
G P++NL+G
Sbjct: 114 GAPILNLNG 122


>sp|PUR7_METKA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 GGPLVNLD 9
G P+VN+D
Sbjct: 129 GDPMVNMD 136


>sp|Y898_METM5|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 2 GGPLVNLDG 10
GG VN+DG
Sbjct: 117 GGFFVNIDG 125


>sp|Y678_METMP|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 2 GGPLVNLDG 10
GG VN+DG
Sbjct: 117 GGFFVNIDG 125


>sp|Y210_METM6|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 2 GGPLVNLDG 10
GG VN+DG
Sbjct: 117 GGFFVNIDG 125


>sp|Y1702_METM7|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 2 GGPLVNLDG 10
GG VN+DG
Sbjct: 117 GGFFVNIDG 125


>sp|Y1514_METVS|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus vannielii

Query: 2 GGPLVNLDG 10
GG VN+DG
Sbjct: 117 GGFFVNIDG 125


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC

Query: 3 GPLVNLDG 10
P++N+DG
Sbjct: 53 APMINVDG 60


>sp|COFD_METTH|2-PHOSPHO-L-LACTATE transferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 SGGPLVNLDG 10
S GP++N++G
Sbjct: 199 SIGPIINMEG 208


>sp|COFD_NATPD|2-PHOSPHO-L-LACTATE transferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SGGPLVNLDG 10
S GP+V LDG
Sbjct: 227 SIGPMVALDG 236


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SGGPLVNLDG 10
SG P V++DG
Sbjct: 220 SGKPPVSIDG 229


>sp|NADK_METMA|NAD kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SGGPLVN 7
+GGP++N
Sbjct: 197 AGGPIIN 203


>sp|NADK_METAC|NAD kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SGGPLVN 7
+GGP++N
Sbjct: 183 AGGPIIN 189


>sp|Y1320_NATPD|PUTATIVE HTH-type transcriptional regulatory protein|Natronomonas pharaonis

Query: 2 GGPLVNLDG 10
GG VN+DG
Sbjct: 121 GGLYVNIDG 129


>sp|FEN_METMA|FLAP endonuclease 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GGPLVNLDG 10
G PLVN G
Sbjct: 44 GSPLVNSQG 52


>sp|QUEC_THEKO|7-CYANO-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GPLVNLD 9
PL+NLD
Sbjct: 167 APLINLD 173


>sp|RNP2_META3|RIBONUCLEASE P protein component 2|Methanococcus aeolicus (strain ATCC

Query: 1 SGGPLVNL 8
SGG +VNL
Sbjct: 27 SGGEVVNL 34


>sp|Y3058_HALWD|PUTATIVE HTH-type transcriptional regulatory protein|Haloquadratum walsbyi

Query: 2 GGPLVNLDG 10
GG VN+DG
Sbjct: 121 GGLYVNIDG 129


>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 3 GPLVNLDG 10
GPL+ LDG
Sbjct: 17 GPLMVLDG 24


>sp|PYRH_METLZ|URIDYLATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SGGPLVNLDG 10
SG PLV +DG
Sbjct: 196 SGIPLVVIDG 205


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 1 SGGPLVNL 8
SG PLVN+
Sbjct: 160 SGNPLVNV 167


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SGGPLVNL 8
SG PLVN+
Sbjct: 160 SGNPLVNV 167


>sp|RPIA_METVS|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus vannielii (strain ATCC 35089

Query: 1 SGGPLVNLD 9
SG PL++LD
Sbjct: 78 SGIPLISLD 86


>sp|DPCKG_PYRAR|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GGPLVNLDG 10
GG L+ +DG
Sbjct: 110 GGVLIKVDG 118


>sp|RPIA_METMP|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain DSM 14266

Query: 1 SGGPLVNLD 9
SG PL++LD
Sbjct: 78 SGIPLISLD 86


>sp|PYRH_METMJ|URIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SGGPLVNLDG 10
SG PL+ LDG
Sbjct: 195 SGIPLLVLDG 204


>sp|Y3946_HALS3|PUTATIVE HTH-type transcriptional regulatory protein|Halobacterium salinarum

Query: 2 GGPLVNLDG 10
GG VN+DG
Sbjct: 121 GGLYVNIDG 129


>sp|Y2112_HALSA|PUTATIVE HTH-type transcriptional regulatory protein|Halobacterium salinarum

Query: 2 GGPLVNLDG 10
GG VN+DG
Sbjct: 121 GGLYVNIDG 129




63|Sequence|311|320|VNLDGEVIGV

>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 NLDGEVIGV 10
NLDGE++GV
Sbjct: 1280 NLDGEILGV 1288


>sp|HIS3_METMA|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NLDGEVIG 9
NLDGEV+G
Sbjct: 103 NLDGEVVG 110


>sp|HIS3_METBF|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 2 NLDGEVIG 9
NL+GEV+G
Sbjct: 110 NLEGEVVG 117


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VNLDGEVIGV 10
V LDGEVI V
Sbjct: 293 VILDGEVIAV 302


>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 VNLDGEVIGV 10
V LDGEVI +
Sbjct: 291 VILDGEVIAI 300


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 VNLDGEVIGV 10
V LDGEVI +
Sbjct: 290 VILDGEVIAI 299


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNLDGEVI 8
VN+DGE+I
Sbjct: 21 VNVDGEII 28


>sp|NTPPA_PYRAB|DTTP/UTP pyrophosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 VNLDGEVIG 9
V LDGEV+G
Sbjct: 68 VVLDGEVLG 76


>sp|PYRB_SULAC|ASPARTATE carbamoyltransferase catalytic subunit|Sulfolobus acidocaldarius

Query: 1 VNLDGEVIG 9
+NL G+VIG
Sbjct: 61 INLGGDVIG 69


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 VNLDGEVIG 9
V+L+G+VIG
Sbjct: 467 VSLEGKVIG 475


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 LDGEVIGV 10
+DGEV+GV
Sbjct: 542 IDGEVVGV 549


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 VNLDGEVIGV 10
V LDGE +GV
Sbjct: 546 VVLDGESVGV 555


>sp|NAT_SULAC|N-ALPHA-ACETYLTRANSFERASE acidocaldarius (strain ATCC 33909

Query: 2 NLDGEVIG 9
+L+GEV+G
Sbjct: 58 DLEGEVVG 65


>sp|NAT_SULTO|N-ALPHA-ACETYLTRANSFERASE tokodaii (strain DSM 16993

Query: 3 LDGEVIG 9
+DGEV+G
Sbjct: 58 VDGEVVG 64


>sp|NADA_THEGJ|QUINOLINATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VNLDGEVI 8
VN+D EVI
Sbjct: 49 VNVDAEVI 56


>sp|ARSM_HALSA|ARSENITE methyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VNLDGEVIGV 10
V DG VIGV
Sbjct: 225 VGPDGHVIGV 234


>sp|SPEE1_HYPBU|POLYAMINE aminopropyltransferase 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 VNLDGEVIGV 10
V++DGEV+ V
Sbjct: 109 VDIDGEVVRV 118


>sp|Y756_METJA|UNCHARACTERIZED protein MJ0756|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNLDGEVIGV 10
+ +DG+++GV
Sbjct: 61 LEIDGKIVGV 70


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 LDGEVIGV 10
LDGEV+ V
Sbjct: 301 LDGEVVAV 308


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 2 NLDGEVIGV 10
N+D E+IG+
Sbjct: 290 NIDSEIIGL 298


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VNLDGEVIGV 10
V +DGEVI +
Sbjct: 290 VIIDGEVIAI 299


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNLDGEVIG 9
+N DG VIG
Sbjct: 134 INDDGSVIG 142


>sp|COFF_METJA|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanocaldococcus jannaschii

Query: 3 LDGEVIG 9
+DGEV+G
Sbjct: 192 VDGEVVG 198


>sp|CBID_METJA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VNLDGEVIG 9
+N+ GEV+G
Sbjct: 347 INMKGEVLG 355


>sp|RPO3_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum neutrophilum (strain DSM

Query: 1 VNLDGEV 7
VN DGEV
Sbjct: 99 VNADGEV 105


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 NLDGEVIGV 10
+LDGEV+ +
Sbjct: 93 DLDGEVVAL 101


>sp|COFF_METMP|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanococcus maripaludis

Query: 3 LDGEVIG 9
+DGEV+G
Sbjct: 189 IDGEVVG 195


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LDGEVIGV 10
+DGEVI V
Sbjct: 292 VDGEVIAV 299


>sp|RL2_METAC|LARGE ribosomal subunit protein uL2|Methanosarcina acetivorans (strain

Query: 2 NLDGEVIGV 10
+L GEV+G+
Sbjct: 38 SLRGEVVGI 46


>sp|PDXT_SULAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfolobus acidocaldarius

Query: 1 VNLDGEVIGV 10
+NL GEVI V
Sbjct: 26 LNLTGEVIAV 35


>sp|RLME_METMJ|RIBOSOMAL RNA large subunit methyltransferase|Methanoculleus marisnigri

Query: 4 DGEVIGV 10
DG VIGV
Sbjct: 62 DGRVIGV 68


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 4 DGEVIGV 10
DGEVIG+
Sbjct: 269 DGEVIGI 275


>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LDGEVIGV 10
LDGEV+ V
Sbjct: 300 LDGEVVAV 307


>sp|DNLI_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 LDGEVIGV 10
LDGEV+ V
Sbjct: 342 LDGEVVAV 349


>sp|LEU1_METJA|2-ISOPROPYLMALATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNLDGEVIGV 10
+NLD E+ G+
Sbjct: 83 LNLDAEICGL 92


>sp|AROE_PYRAB|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 1 VNLDGEVIG 9
+NL+G +IG
Sbjct: 87 INLEGSLIG 95




64|Sequence|316|325|EVIGVNTMKV

>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 1 EVIGVNTMKV 10
EV+G+N KV
Sbjct: 92 EVLGINAEKV 101


>sp|Y1212_ARCFU|UNCHARACTERIZED protein AF_1212|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVIGVNTMKV 10
+ +GVNT+KV
Sbjct: 38 KALGVNTVKV 47


>sp|KPYK_THELN|PYRUVATE kinase|Thermococcus litoralis (strain ATCC 51850

Query: 1 EVIGVNTMKV 10
+ +G NTM++
Sbjct: 462 KTVGTNTMRI 471




65|Sequence|321|330|NTMKVTAGIS

>sp|Y539_PYRAB|MEMO1 family protein PYRAB05390|Pyrococcus abyssi (strain GE5 /

Query: 1 NTMKVTAGIS 10
N+ K+TAG++
Sbjct: 34 NSRKITAGVA 43


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 3 MKVTAGI 9
MKVTAG+
Sbjct: 206 MKVTAGL 212


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 1 NTMKVTAGIS 10
NT+ +T G+S
Sbjct: 710 NTIGITGGVS 719


>sp|MCH_METMJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NTMKVTAGI 9
+T K+TAGI
Sbjct: 198 DTKKITAGI 206


>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 1 NTMKVTAGI 9
N KVTAGI
Sbjct: 217 NNEKVTAGI 225


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NTMKVTAG 8
+T+K+TAG
Sbjct: 14 STVKITAG 21




66|Sequence|326|335|TAGISFAIPS

>sp|RL18_IGNH4|LARGE ribosomal subunit protein uL18|Ignicoccus hospitalis (strain KIN4/I

Query: 2 AGISFAIP 9
AGI +A+P
Sbjct: 97 AGIQYAVP 104


>sp|RL18_STAMF|LARGE ribosomal subunit protein uL18|Staphylothermus marinus (strain ATCC

Query: 2 AGISFAIP 9
AGI +A+P
Sbjct: 97 AGIKYAVP 104


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 2 AGISFAIP 9
AG+SF+ P
Sbjct: 277 AGVSFSTP 284


>sp|PDAD_METM5|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain C5 /

Query: 2 AGISFAIPS 10
AGIS AIP
Sbjct: 90 AGISVAIPK 98


>sp|PDAD_METM6|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain C6 /

Query: 2 AGISFAIPS 10
AGIS AIP
Sbjct: 90 AGISVAIPK 98


>sp|PDAD_METVS|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus vannielii (strain ATCC 35089

Query: 2 AGISFAIPS 10
AGIS AIP
Sbjct: 90 AGISVAIPK 98


>sp|PDAD_METMP|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain DSM

Query: 2 AGISFAIPS 10
AGIS AIP
Sbjct: 90 AGISVAIPK 98


>sp|PDAD_METM7|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain C7 /

Query: 2 AGISFAIPS 10
AGIS A+P
Sbjct: 90 AGISVAVPK 98




67|Sequence|331|340|FAIPSDRLRE

>sp|VORB_METTH|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter thermautotrophicus

Query: 1 FAIPSDRLRE 10
F PSDR+RE
Sbjct: 283 FPFPSDRIRE 292


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 1 FAIPSDRLRE 10
F PS+R+RE
Sbjct: 283 FPFPSERIRE 292


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IPSDRLRE 10
+P+D+LRE
Sbjct: 395 VPADKLRE 402


>sp|RNP1_THEVO|RIBONUCLEASE P protein component 1|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PSDRLRE 10
P DRLRE
Sbjct: 72 PEDRLRE 78


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 1 FAIPSDRLR 9
F IP DRL+
Sbjct: 247 FVIPEDRLQ 255


>sp|PDAD_PICTO|PYRUVOYL-DEPENDENT arginine decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 FAIPSDR 7
+A+PSDR
Sbjct: 90 YAVPSDR 96


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 AIPSDRLR 9
A+P DRLR
Sbjct: 255 AVPVDRLR 262


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FAIPSDRLRE 10
IP DRL E
Sbjct: 506 LGIPKDRLEE 515


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FAIPSDRL 8
F++PSD++
Sbjct: 187 FSVPSDKV 194


>sp|RNP1_THEAC|RIBONUCLEASE P protein component 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PSDRLRE 10
P DRLRE
Sbjct: 71 PEDRLRE 77


>sp|Y1199_ARCFU|UNCHARACTERIZED protein AF_1199|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IPSDRLRE 10
+P+D++RE
Sbjct: 344 VPTDKIRE 351


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 3 IPSDRLRE 10
+P D+LRE
Sbjct: 332 VPEDKLRE 339


>sp|NADA_PYRAE|QUINOLINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AIPSDR 7
AIPSDR
Sbjct: 134 AIPSDR 139


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 1 FAIPSDRLRE 10
+A+P D+L E
Sbjct: 379 YAVPRDKLIE 388


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 FAIPSDRLRE 10
F IP+D+L +
Sbjct: 570 FTIPNDQLEK 579


>sp|FTSZ1_ARCFU|CELL division protein FtsZ 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IPSDRLRE 10
IP+DRL E
Sbjct: 195 IPNDRLLE 202


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 4 PSDRLRE 10
PSDR+R+
Sbjct: 351 PSDRIRK 357


>sp|MRE11_HALVD|DNA double-strand break repair protein|Haloferax volcanii (strain ATCC

Query: 1 FAIPSDRLRE 10
FA P D +RE
Sbjct: 314 FADPDDAVRE 323


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 IPSDRLRE 10
IP D LRE
Sbjct: 354 IPQDALRE 361


>sp|Y1195_METTH|UNCHARACTERIZED protein MTH_1195|Methanothermobacter thermautotrophicus (strain

Query: 4 PSDRLRE 10
PS+R+RE
Sbjct: 96 PSERIRE 102




68|Sequence|336|345|DRLREFLHRG

>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DRLREFLHR 9
D +REF HR
Sbjct: 16 DEVREFWHR 24


>sp|EF1A_PYRWO|ELONGATION factor 1-alpha|Pyrococcus woesei

Query: 1 DRLREFLHRG 10
DRLRE RG
Sbjct: 61 DRLREERERG 70


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 1 DRLREFLH 8
D LRE++H
Sbjct: 87 DSLREYIH 94


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DRLREFLH 8
+RLRE LH
Sbjct: 128 ERLREVLH 135


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 DRLREFLHRG 10
DR+RE++ G
Sbjct: 355 DRMREYIENG 364


>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DRLREFLHR 9
+RLREF+ +
Sbjct: 277 ERLREFIKK 285


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 DRLREFLHRG 10
D+L EF+ RG
Sbjct: 518 DKLVEFVARG 527


>sp|CDC6_METLZ|ORC1-TYPE DNA replication protein|Methanocorpusculum labreanum (strain ATCC

Query: 1 DRLREFLHR 9
D+LR+ LH+
Sbjct: 228 DQLRDILHQ 236


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RLREFLHRG 10
RLREF+ G
Sbjct: 27 RLREFVKSG 35


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 1 DRLREF 6
DRLREF
Sbjct: 238 DRLREF 243


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RLREFLHRG 10
RLREF+ G
Sbjct: 27 RLREFVKAG 35


>sp|Y1329_PYRAE|PUTATIVE esterase PAE1329|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DRLREFLHR 9
+++ EFLH+
Sbjct: 14 EKVNEFLHK 22


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 RLREFLH 8
+LR+FLH
Sbjct: 65 QLRDFLH 71


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RLREFLHRG 10
RLREF+ G
Sbjct: 27 RLREFVKSG 35


>sp|SYD_THEVO|ASPARTATE--TRNA(ASP) ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LREFLH 8
+REFLH
Sbjct: 143 IREFLH 148


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RLREFLHRG 10
RLREF+ G
Sbjct: 27 RLREFVRGG 35


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DRLREFLHRG 10
D+LR F++ G
Sbjct: 562 DKLRRFIYDG 571




69|Sequence|341|350|FLHRGEKKNS

>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 LHRGEKKNS 10
LHRGEK S
Sbjct: 132 LHRGEKTKS 140


>sp|ARGC_METLZ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LHRGEKKNS 10
LHR E KN+
Sbjct: 127 LHRNEVKNA 135


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLHRGEKKN 9
F+H GEKK+
Sbjct: 214 FVHPGEKKH 222


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LHRGEK 7
LH+GEK
Sbjct: 290 LHKGEK 295


>sp|LYSY_PICTO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 LHRGEKKNS 10
HR E KNS
Sbjct: 133 FHRNEIKNS 141




70|Sequence|346|355|EKKNSSSGIS

***** No hits found ******


71|Sequence|351|360|SSGISGSQRR

>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 1 SSGISGSQRR 10
SSG+S +QRR
Sbjct: 591 SSGVSETQRR 600


>sp|TRPD_NITMS|ANTHRANILATE phosphoribosyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 SSGISGS 7
SSGISGS
Sbjct: 115 SSGISGS 121


>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 2 SGISGSQRR 10
+GISGS R+
Sbjct: 4 TGISGSPRK 12




72|Sequence|356|365|GSQRRYIGVM

>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GSQRRYIGVM 10
G +RYIG++
Sbjct: 369 GRAKRYIGIL 378


>sp|PYRH_METMJ|URIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GSQRRYIGV 9
G RRYIGV
Sbjct: 46 GEARRYIGV 54


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 2 SQRRYIGVM 10
S+RRY+G++
Sbjct: 185 SRRRYLGMV 193


>sp|Y2518_PYRAE|UPF0248 protein PAE2518|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GSQRRYI 7
GSQ RYI
Sbjct: 49 GSQERYI 55




73|Sequence|361|370|YIGVMMLTLS

***** No hits found ******


74|Sequence|366|375|MLTLSPSILA

***** No hits found ******


75|Sequence|371|380|PSILAELQLR

***** No hits found ******


76|Sequence|376|385|ELQLREPSFP

>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 2 LQLREPSFP 10
L+LR P++P
Sbjct: 472 LELRGPNYP 480


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 2 LQLREPSFP 10
L+LR P++P
Sbjct: 471 LELRGPNYP 479


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 5 REPSFP 10
REP+FP
Sbjct: 342 REPTFP 347


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 2 LQLREPSFP 10
L+LR P++P
Sbjct: 468 LELRGPNYP 476


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 2 LQLREPSFP 10
L+LR P++P
Sbjct: 468 LELRGPNYP 476


>sp|CAS8_THETK|CRISPR system associated protein Cas8|Thermoproteus tenax (strain ATCC

Query: 1 ELQLREPSFP 10
E++ R PS+P
Sbjct: 297 EIKYRAPSWP 306


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 LQLREPSFP 10
L+LR P++P
Sbjct: 471 LELRGPNYP 479


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LQLREPSFP 10
L+LR P++P
Sbjct: 471 LELRGPNYP 479


>sp|RRP4_METAC|EXOSOME complex component Rrp4|Methanosarcina acetivorans (strain ATCC

Query: 1 ELQLREPSF 9
EL LR+PS
Sbjct: 124 ELALRDPSL 132


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ELQLREPSFP 10
E+Q+R P P
Sbjct: 391 EVQVRRPEIP 400


>sp|AATC_METTH|A-TYPE ATP synthase subunit C|Methanothermobacter thermautotrophicus

Query: 5 REPSFP 10
REP FP
Sbjct: 371 REPGFP 376


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 1 ELQLREP 7
EL+LREP
Sbjct: 356 ELELREP 362


>sp|RL32_METMA|LARGE ribosomal subunit protein eL32|Methanosarcina mazei (strain ATCC

Query: 1 ELQLREPSF 9
EL+L +PSF
Sbjct: 86 ELELVDPSF 94




77|Sequence|381|390|EPSFPDVQHG

>sp|RPO3_METKA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanopyrus kandleri (strain AV19 /

Query: 1 EPSFPD 6
EP+FPD
Sbjct: 124 EPAFPD 129


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 EPSFPDV 7
EP++PDV
Sbjct: 368 EPTYPDV 374


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EPSFPDVQH 9
E FPDV++
Sbjct: 218 EEEFPDVRY 226


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 EPSFPDVQH 9
E FPDV++
Sbjct: 213 EEEFPDVRY 221


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EPSFPDVQ 8
EPSF D++
Sbjct: 117 EPSFEDIK 124


>sp|UPP_METTH|URACIL phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 4 FPDVQHG 10
FP+ +HG
Sbjct: 97 FPEAEHG 103


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 1 EPSFPDVQHG 10
EP PD+ G
Sbjct: 59 EPGAPDIDEG 68


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 3 SFPDVQHG 10
+FP QHG
Sbjct: 226 TFPGPQHG 233


>sp|URE3_NATPD|UREASE subunit gamma|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EPSFPD 6
EP FPD
Sbjct: 83 EPMFPD 88


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 SFPDVQHG 10
+FP QHG
Sbjct: 226 TFPGPQHG 233


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EPSFPDV 7
EP +PDV
Sbjct: 362 EPQYPDV 368


>sp|RL21_AERPE|LARGE ribosomal subunit protein eL21|Aeropyrum pernix (strain ATCC

Query: 2 PSFPD 6
PSFPD
Sbjct: 48 PSFPD 52


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EPSFPDV 7
EP +PDV
Sbjct: 369 EPRYPDV 375


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PSFPDV 7
P+FPDV
Sbjct: 825 PAFPDV 830




78|Sequence|386|395|DVQHGVLIHK

>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DVQHGVLIHK 10
D + GV+IHK
Sbjct: 443 DKRAGVIIHK 452


>sp|IF6_THEAC|TRANSLATION initiation factor 6|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 HGVLIHK 10
HG +IHK
Sbjct: 106 HGAIIHK 112


>sp|RS8_STAMF|SMALL ribosomal subunit protein uS8|Staphylothermus marinus (strain ATCC

Query: 4 HGVLIHK 10
HGVL HK
Sbjct: 111 HGVLSHK 117


>sp|IF6_THEVO|TRANSLATION initiation factor 6|Thermoplasma volcanium (strain ATCC 51530

Query: 4 HGVLIHK 10
HG +IHK
Sbjct: 108 HGAIIHK 114




79|Sequence|391|400|VLIHKVILGS

>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VLIHKVILGS 10
V+IH ILGS
Sbjct: 457 VIIHTAILGS 466


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VLIHKVILGS 10
V+IH ILGS
Sbjct: 457 VIIHTAILGS 466


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VLIHKVILGS 10
V+IH ILGS
Sbjct: 456 VIIHTAILGS 465


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VLIHKVILGS 10
V+IH ILGS
Sbjct: 456 VIIHTAILGS 465


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VLIHKVILGS 10
V+IH ILGS
Sbjct: 461 VIIHTAILGS 470


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 VLIHKVILGS 10
V+IH I+GS
Sbjct: 455 VIIHTAIIGS 464


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VLIHKVILGS 10
V+IH I+GS
Sbjct: 455 VIIHTAIIGS 464


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VLIHKVILGS 10
+++H ILGS
Sbjct: 485 IILHNAILGS 494


>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 LIHKVILGS 10
+IH+ +LGS
Sbjct: 308 IIHRALLGS 316


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VLIHKVILGS 10
V+IH ++GS
Sbjct: 460 VIIHTALIGS 469


>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VLIHKVILG 9
VL+H+ ++G
Sbjct: 220 VLLHQTVIG 228


>sp|TRPB_PYRAE|TRYPTOPHAN synthase beta chain|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VLIHKVILG 9
VL+H+ ++G
Sbjct: 220 VLLHQTVIG 228


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 1 VLIHKVILG 9
VL+H+ ++G
Sbjct: 232 VLLHQTVIG 240


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLIHKVILG 9
VL+H+ ++G
Sbjct: 237 VLLHQTVIG 245


>sp|TRPB2_AERPE|TRYPTOPHAN synthase beta chain 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLIHKVILG 9
VL+H+ ++G
Sbjct: 239 VLLHQTVIG 247




80|Sequence|396|405|VILGSPAHRA

>sp|AATE_METB6|A-TYPE ATP synthase subunit E|Methanoregula boonei (strain DSM 21154

Query: 2 ILGSPAH 8
ILG PAH
Sbjct: 144 ILGEPAH 150


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 1 VILGSPAH 8
+ILG P H
Sbjct: 218 IILGGPGH 225


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LGSPAH 8
LG+PAH
Sbjct: 688 LGTPAH 693


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 3 LGSPAH 8
LG+PAH
Sbjct: 557 LGTPAH 562


>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VILGSPAH 8
++LG+P H
Sbjct: 175 IVLGNPVH 182


>sp|ISF2_METJA|IRON-SULFUR flavoprotein MJ1083|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VILGSPAH 8
+ILGSP +
Sbjct: 78 IILGSPVY 85


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LGSPAH 8
LG+PAH
Sbjct: 222 LGTPAH 227


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LGSPAH 8
LG+PAH
Sbjct: 219 LGTPAH 224


>sp|RL2_METS3|LARGE ribosomal subunit protein uL2|Methanobrevibacter smithii (strain

Query: 4 GSPAHR 9
G+PAHR
Sbjct: 13 GTPAHR 18




81|Sequence|401|410|PAHRAGLRPG

>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 1 PAHRAGLRPG 10
P +R+G+RPG
Sbjct: 110 PLYRSGMRPG 119


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AHRAGLR 8
AHRAG+R
Sbjct: 163 AHRAGVR 169


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PAHRAGLRP 9
P RAG RP
Sbjct: 182 PEFRAGTRP 190


>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PAHRAGLRP 9
P R G+RP
Sbjct: 253 PPFRGGMRP 261


>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 PAHRAGLRP 9
P R G+RP
Sbjct: 253 PPFRGGMRP 261


>sp|GUAAB_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus abyssi

Query: 4 RAGLRP 9
RAGLRP
Sbjct: 222 RAGLRP 227


>sp|GUAAB_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus horikoshii

Query: 4 RAGLRP 9
RAGLRP
Sbjct: 222 RAGLRP 227


>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 2 AHRAGLRPG 10
HR G RPG
Sbjct: 27 CHREGERPG 35


>sp|RL22_PICTO|LARGE ribosomal subunit protein uL22|Picrophilus torridus (strain ATCC

Query: 2 AHRAGLRPG 10
+HR G+ PG
Sbjct: 67 SHRKGIGPG 75


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 2 AHRAGLR 8
AHRAG++
Sbjct: 733 AHRAGIK 739


>sp|TRPB1_AERPE|TRYPTOPHAN synthase beta chain 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PAHRAGLR 8
P+H AGLR
Sbjct: 327 PSHAAGLR 334


>sp|RL22_THEAC|LARGE ribosomal subunit protein uL22|Thermoplasma acidophilum (strain

Query: 2 AHRAGLRPG 10
+HR G+ PG
Sbjct: 69 SHRPGVGPG 77


>sp|TRPB_PYRAR|TRYPTOPHAN synthase beta chain|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PAHRAGLR 8
P H AGLR
Sbjct: 317 PVHAAGLR 324


>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PAHRAGLR 8
P H AGLR
Sbjct: 317 PVHAAGLR 324


>sp|Y688_THEON|UPF0284 protein TON_0688|Thermococcus onnurineus (strain NA1)

Query: 4 RAGLRPG 10
RAG++PG
Sbjct: 182 RAGIKPG 188


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC

Query: 5 AGLRPG 10
AG+RPG
Sbjct: 62 AGIRPG 67




82|Sequence|406|415|GLRPGDVILA

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 GLRPGDVI 8
GL+PGDVI
Sbjct: 31 GLKPGDVI 38


>sp|MJK2_METJA|PROBABLE potassium channel protein 2|Methanocaldococcus jannaschii (strain

Query: 2 LRPGDVILA 10
L+PGDVI A
Sbjct: 314 LKPGDVIYA 322


>sp|DGGGP_METS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LRPGDVILA 10
+RPG+VI+A
Sbjct: 8 IRPGNVIMA 16


>sp|PCNA2_AERPE|DNA polymerase sliding clamp 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 LRPGDVILA 10
++PGDV+L+
Sbjct: 182 MKPGDVLLS 190


>sp|LEUD_PYRHO|3-ISOPROPYLMALATE dehydratase small subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 LRPGDVILA 10
+RPGDV++A
Sbjct: 49 VRPGDVVVA 57


>sp|GLYA_METMA|SERINE hydroxymethyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LRPGDVILA 10
L+PGD IL+
Sbjct: 106 LQPGDTILS 114


>sp|LEUD1_PYRFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus furiosus (strain ATCC

Query: 2 LRPGDVILA 10
++PGD+I+A
Sbjct: 49 MKPGDIIVA 57


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 3 RPGDVILA 10
RPGDV++A
Sbjct: 81 RPGDVVVA 88


>sp|DHQS_METHJ|3-DEHYDROQUINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GLRPGDVIL 9
L+PGDV+L
Sbjct: 299 SLKPGDVVL 307


>sp|WTPC_PYRAB|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus abyssi (strain GE5 /

Query: 1 GLRPGDVILA 10
G+RP D+IL+
Sbjct: 266 GVRPEDIILS 275


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LRPGDVILA 10
L+PGD I++
Sbjct: 106 LKPGDTIMS 114


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 RPGDVILA 10
RPGD ILA
Sbjct: 284 RPGDRILA 291


>sp|RPO5_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus kodakarensis (strain

Query: 1 GLRPGDVI 8
G +PGDVI
Sbjct: 54 GAKPGDVI 61


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GLRPGDVI 8
G +PGDVI
Sbjct: 305 GTQPGDVI 312


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 3 RPGDVILA 10
RPGDVI A
Sbjct: 116 RPGDVITA 123


>sp|RPO5_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo5|Pyrococcus furiosus (strain ATCC

Query: 1 GLRPGDVI 8
G +PGDVI
Sbjct: 54 GAKPGDVI 61


>sp|LEUD1_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 2 LRPGDVILA 10
++PGD+I+A
Sbjct: 49 MKPGDIIVA 57


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 PGDVILA 10
PGDV+LA
Sbjct: 110 PGDVMLA 116


>sp|ARSM_METAC|ARSENITE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LRPGDVIL 9
L+PGD++L
Sbjct: 71 LKPGDIVL 78


>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 2 LRPGDVI 8
LRPGDV+
Sbjct: 30 LRPGDVV 36


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 1 GLRPGDVIL 9
G+RPGD ++
Sbjct: 115 GMRPGDFVV 123


>sp|WTPC_THEKO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Thermococcus kodakarensis (strain

Query: 1 GLRPGDVILA 10
G+RP D++L+
Sbjct: 267 GIRPEDIVLS 276


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 2 LRPGDVILA 10
+RPGDVI+
Sbjct: 111 VRPGDVIVG 119


>sp|RPO5_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo5|Sulfolobus acidocaldarius (strain

Query: 1 GLRPGDVI 8
G +PGD+I
Sbjct: 56 GAKPGDII 63


>sp|IF1A_SULAC|TRANSLATION initiation factor 1A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LRPGDVILA 10
+R GDV+LA
Sbjct: 60 IREGDVVLA 68


>sp|PELO_IGNH4|PROTEIN pelota homolog|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GLRPGDVILA 10
LRPGD++ A
Sbjct: 29 ALRPGDLVRA 38


>sp|RPO5_META3|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus aeolicus (strain ATCC

Query: 1 GLRPGDVI 8
G +PGDV+
Sbjct: 48 GAKPGDVV 55


>sp|LEUD2_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 LRPGDVILA 10
RPGD I+A
Sbjct: 50 FRPGDFIVA 58


>sp|RPO5_NITMS|DNA-DIRECTED RNA polymerase subunit Rpo5|Nitrosopumilus maritimus (strain

Query: 1 GLRPGDVI 8
G++PGD+I
Sbjct: 55 GVKPGDMI 62


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 LRPGDVILA 10
L+PGD +LA
Sbjct: 371 LKPGDKVLA 379


>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LRPGDVILA 10
L+PGD +LA
Sbjct: 346 LKPGDRVLA 354


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 LRPGDVILA 10
L+PGD I++
Sbjct: 106 LQPGDTIMS 114


>sp|RPO5_THECE|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus celer

Query: 1 GLRPGDVI 8
G +PGDV+
Sbjct: 54 GAKPGDVL 61


>sp|Y364_METJA|UNCHARACTERIZED protein MJ0364|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLRPGDVI 8
GLR GDV+
Sbjct: 34 GLRVGDVV 41


>sp|RPO5_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo5|Pyrococcus horikoshii (strain ATCC

Query: 1 GLRPGDVI 8
G +PGD+I
Sbjct: 54 GAKPGDII 61


>sp|RPO5_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo5|Pyrococcus abyssi (strain GE5 /

Query: 1 GLRPGDVI 8
G +PGD+I
Sbjct: 54 GAKPGDII 61


>sp|RNZ_THEGJ|RIBONUCLEASE Z|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GLRPGDVI 8
GLRPG ++
Sbjct: 164 GLRPGPIL 171


>sp|RPO5_THEON|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus onnurineus (strain NA1)

Query: 1 GLRPGDVI 8
G +PGDV+
Sbjct: 54 GAKPGDVL 61


>sp|RPO5_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermococcus gammatolerans (strain

Query: 1 GLRPGDVI 8
G +PGDVI
Sbjct: 54 GAKPGDVI 61


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LRPGDVIL 9
L+PGD +L
Sbjct: 97 LKPGDTVL 104


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii

Query: 2 LRPGDVIL 9
+ PGDV+L
Sbjct: 83 ISPGDVVL 90


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LRPGDVI 8
L+PGD++
Sbjct: 535 LKPGDIV 541


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 RPGDVILA 10
+PG+V+LA
Sbjct: 346 QPGEVVLA 353


>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LRPGDVIL 9
+ PGD+IL
Sbjct: 448 VNPGDIIL 455


>sp|RPO5_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo5|Sulfurisphaera tokodaii (strain DSM

Query: 1 GLRPGDVI 8
G +PGD+I
Sbjct: 56 GAKPGDII 63


>sp|HACB2_METAC|METHANOGEN homoaconitase small subunit 2|Methanosarcina acetivorans (strain

Query: 3 RPGDVILA 10
+PGD+I+A
Sbjct: 52 KPGDIIVA 59


>sp|T1S2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 2 LRPGDVILA 10
L+ GD++LA
Sbjct: 284 LKSGDIVLA 292


>sp|TOP6A_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLRPGDVI 8
G+RP D++
Sbjct: 280 GIRPTDIV 287


>sp|PUR5_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LRPGDVILA 10
+RPGD +L
Sbjct: 163 IRPGDYVLG 171


>sp|HACB_METMA|METHANOGEN homoaconitase small subunit|Methanosarcina mazei (strain ATCC

Query: 3 RPGDVILA 10
+PGD+I+A
Sbjct: 53 KPGDIIVA 60


>sp|NADC_ARCFU|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 2 LRPGDVIL 9
++PGDV++
Sbjct: 53 IKPGDVVM 60


>sp|HACB1_METAC|METHANOGEN homoaconitase small subunit 1|Methanosarcina acetivorans (strain

Query: 3 RPGDVILA 10
+PGD+I+A
Sbjct: 53 KPGDIIVA 60


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LRPGDVILA 10
L+P DVIL+
Sbjct: 866 LKPQDVILS 874


>sp|PUR5_METM6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LRPGDVILA 10
++PGDVI+
Sbjct: 166 VKPGDVIVG 174


>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLRPGDVIL 9
GLRP D+++
Sbjct: 118 GLRPLDIVV 126


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LRPGDVIL 9
L+PGD+++
Sbjct: 606 LKPGDLVV 613


>sp|AMPPA_THEPD|AMP phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 2 LRPGDVI 8
LRPGD++
Sbjct: 342 LRPGDLV 348


>sp|LEUC_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase large subunit|Methanocaldococcus jannaschii (strain

Query: 2 LRPGDVILA 10
+ PGD+++A
Sbjct: 19 VSPGDIVMA 27


>sp|TOP6A_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 GLRPGDVI 8
G+RP D++
Sbjct: 286 GIRPQDIV 293


>sp|TOP6A_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 GLRPGDVI 8
G+RP D++
Sbjct: 286 GIRPQDIV 293


>sp|APGM_PYRCJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum calidifontis (strain DSM

Query: 2 LRPGDVIL 9
LRPGDV
Sbjct: 85 LRPGDVAF 92


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 2 LRPGDVILA 10
L+PGD I+
Sbjct: 106 LKPGDTIMG 114


>sp|TOP6A_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 GLRPGDVI 8
G+RP D++
Sbjct: 288 GIRPEDIV 295


>sp|PELO_PICTO|PROTEIN pelota homolog|Picrophilus torridus (strain ATCC 700027

Query: 2 LRPGDVI 8
L PGD+I
Sbjct: 29 LNPGDII 35


>sp|APGM_PYRNV|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LRPGDVIL 9
LRPGDV
Sbjct: 85 LRPGDVAF 92


>sp|SPT5_PYRFU|TRANSCRIPTION elongation factor Spt5|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLRPGDVI 8
GL PGD++
Sbjct: 91 GLEPGDLV 98


>sp|SPT5_THEKO|TRANSCRIPTION elongation factor Spt5|Thermococcus kodakarensis (strain ATCC

Query: 1 GLRPGDVI 8
G PGD++
Sbjct: 92 GFEPGDIV 99


>sp|RPO5_METBU|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcoides burtonii (strain DSM

Query: 1 GLRPGDVI 8
G PGDV+
Sbjct: 51 GAEPGDVV 58


>sp|RNZ_METAC|RIBONUCLEASE Z|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LRPGDVI 8
L+PGDV+
Sbjct: 118 LKPGDVV 124


>sp|PAND_PYRIL|ASPARTATE 1-decarboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RPGDVIL 9
RPG+V+L
Sbjct: 62 RPGEVVL 68


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC

Query: 2 LRPGDVILA 10
++PG+++LA
Sbjct: 20 VKPGEIVLA 28


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus (strain

Query: 1 GLRPGDVILA 10
G+RP DV L+
Sbjct: 275 GIRPEDVKLS 284


>sp|COFC_HALWD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 RPGDVILA 10
R GD++LA
Sbjct: 208 REGDIVLA 215


>sp|TOP6A_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLRPGDVI 8
GL+P D++
Sbjct: 289 GLQPSDIV 296


>sp|TOP6A_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 GLRPGDVI 8
GL+P D++
Sbjct: 289 GLQPSDIV 296


>sp|TOP6A_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GLRPGDVI 8
GL+P D++
Sbjct: 293 GLQPSDIV 300


>sp|WTPC_PYRFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus furiosus (strain ATCC

Query: 1 GLRPGDVILA 10
G+RP D++++
Sbjct: 266 GIRPEDILIS 275


>sp|PUR5_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PGDVILA 10
PGDVIL
Sbjct: 161 PGDVILG 167


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LRPGDVILA 10
+ PGDV+ A
Sbjct: 30 ITPGDVVYA 38


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GLRPGDVI 8
G +PGD+I
Sbjct: 138 GAKPGDII 145


>sp|PUR7_METBF|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GLRPGDVILA 10
G R G++ILA
Sbjct: 180 GRRNGEIILA 189


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 2 LRPGDVI 8
LRPGD +
Sbjct: 121 LRPGDYV 127


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 GLRPGDVI 8
GL+ GDV+
Sbjct: 92 GLKKGDVV 99


>sp|RPO5_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo5|Archaeoglobus fulgidus (strain ATCC

Query: 1 GLRPGDVI 8
G +PGD++
Sbjct: 50 GAKPGDIV 57


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 GLRPGDVIL 9
L+P DVIL
Sbjct: 208 ALKPDDVIL 216


>sp|SRP54_SACI6|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain M.16.4

Query: 1 GLRPGDVIL 9
L+P DVIL
Sbjct: 208 ALKPDDVIL 216


>sp|SRP54_SACI4|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 GLRPGDVIL 9
L+P DVIL
Sbjct: 208 ALKPDDVIL 216


>sp|SRP54_SACI3|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 GLRPGDVIL 9
L+P DVIL
Sbjct: 208 ALKPDDVIL 216


>sp|RS17_ARCFU|SMALL ribosomal subunit protein uS17|Archaeoglobus fulgidus (strain

Query: 3 RPGDVI 8
RPGD++
Sbjct: 79 RPGDIV 84


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RPGDVILA 10
+PGD ILA
Sbjct: 284 KPGDHILA 291


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GLRPGDVI 8
G RPGD++
Sbjct: 154 GARPGDLV 161


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GLRPGDVILA 10
GLRPG V A
Sbjct: 222 GLRPGSVADA 231


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GLRPGDVILA 10
GLRPG V A
Sbjct: 222 GLRPGSVADA 231


>sp|SRP54_SACI7|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 GLRPGDVIL 9
L+P DVIL
Sbjct: 208 ALKPDDVIL 216


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 GLRPGDVIL 9
L+P DVIL
Sbjct: 208 ALKPDDVIL 216


>sp|HMGCS_THEVO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 RPGDVILA 10
+PGD ILA
Sbjct: 284 KPGDHILA 291


>sp|RL10_SACS2|LARGE ribosomal subunit protein uL10|Saccharolobus solfataricus (strain

Query: 3 RPGDVILA 10
+PGDVI A
Sbjct: 167 KPGDVIPA 174


>sp|KAE1_SACI1|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 GLRPGDVI 8
G++PGD++
Sbjct: 39 GMKPGDLL 46


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GLRPGDVIL 9
GLRPG+ ++
Sbjct: 55 GLRPGEPVV 63


>sp|RPO5_THEPD|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermofilum pendens (strain DSM 2475

Query: 3 RPGDVIL 9
+PGDVI+
Sbjct: 54 KPGDVIM 60


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LRPGDVIL 9
++PGDV++
Sbjct: 427 IKPGDVVI 434


>sp|KAE1_SACI6|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 GLRPGDVI 8
G++PGD++
Sbjct: 39 GMKPGDLL 46


>sp|KAE1_SACI4|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 GLRPGDVI 8
G++PGD++
Sbjct: 39 GMKPGDLL 46


>sp|KAE1_SACI3|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 GLRPGDVI 8
G++PGD++
Sbjct: 39 GMKPGDLL 46


>sp|KAE1_SACI7|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 GLRPGDVI 8
G++PGD++
Sbjct: 39 GMKPGDLL 46


>sp|KAE1_SACI2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 GLRPGDVI 8
G++PGD++
Sbjct: 39 GMKPGDLL 46


>sp|SRP54_SACS2|SIGNAL recognition particle 54 kDa|Saccharolobus solfataricus (strain ATCC

Query: 2 LRPGDVIL 9
L+P DVIL
Sbjct: 209 LKPDDVIL 216


>sp|KAE1_SACS2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 GLRPGDVI 8
G++PGD++
Sbjct: 39 GMKPGDLL 46


>sp|RRP4_KORCO|EXOSOME complex component Rrp4|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LRPGDVILA 10
L+ GDVILA
Sbjct: 111 LKIGDVILA 119


>sp|PGK_METKA|PHOSPHOGLYCERATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 LRPGDVIL 9
L PG+VIL
Sbjct: 105 LEPGEVIL 112


>sp|RIFK_PYRAR|RIBOFLAVIN kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GLRPGDVI 8
GLR GDV+
Sbjct: 197 GLRDGDVV 204


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 2 LRPGDVILA 10
++PGDV++
Sbjct: 262 VKPGDVVVG 270


>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 4 PGDVILA 10
PGDV++A
Sbjct: 111 PGDVMIA 117


>sp|PUR7_METMA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLRPGDVILA 10
G R G+++LA
Sbjct: 180 GRREGEIVLA 189


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LRPGDVIL 9
++PGDV++
Sbjct: 427 IKPGDVVV 434


>sp|THIL_PYRCJ|THIAMINE-MONOPHOSPHATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 RPGDVIL 9
RPGDV++
Sbjct: 139 RPGDVLV 145


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LRPGDVILA 10
+RPGD ++
Sbjct: 169 IRPGDAVIG 177


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LRPGDVIL 9
++PGDV++
Sbjct: 427 IKPGDVVV 434


>sp|RPO5_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo5|Pyrobaculum aerophilum (strain ATCC

Query: 1 GLRPGDVI 8
G +PGDV+
Sbjct: 47 GAKPGDVL 54


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 2 LRPGDVIL 9
L PGDVI+
Sbjct: 314 LYPGDVII 321


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLRPGDVILA 10
G RPG +LA
Sbjct: 273 GTRPGASVLA 282


>sp|THIL_METKA|THIAMINE-MONOPHOSPHATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 RPGDVI 8
RPGDV+
Sbjct: 156 RPGDVV 161


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GLRPGD 6
GL+PGD
Sbjct: 463 GLKPGD 468


>sp|RPO5_HYPBU|DNA-DIRECTED RNA polymerase subunit Rpo5|Hyperthermus butylicus (strain DSM

Query: 1 GLRPGDVI 8
G +PGD++
Sbjct: 55 GAKPGDIV 62


>sp|MFNA_PYRAB|PROBABLE L-aspartate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 GLRPGDVILA 10
G RPG +LA
Sbjct: 274 GTRPGASVLA 283


>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LRPGDVIL 9
+RPGD ++
Sbjct: 170 IRPGDAVI 177


>sp|LEUD_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase small subunit|Methanocaldococcus jannaschii (strain

Query: 2 LRPGDVILA 10
++PGD+I+
Sbjct: 51 VKPGDIIVG 59


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 GLRPGDVIL 9
G+RPG+ ++
Sbjct: 60 GIRPGEPVI 68


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 3 RPGDVIL 9
RPGDV++
Sbjct: 186 RPGDVLV 192


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RPGDVIL 9
RPGD+I+
Sbjct: 182 RPGDLIV 188


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 3 RPGDVI 8
RPGD++
Sbjct: 314 RPGDIV 319




83|Sequence|411|420|DVILAIGEQM

>sp|HTR1_HALSA|SENSORY rhodopsin I transducer|Halobacterium salinarum (strain ATCC 700922

Query: 1 DVILAIGEQM 10
DVI IGEQ
Sbjct: 328 DVITDIGEQT 337


>sp|HTR1_HALS3|SENSORY rhodopsin I transducer|Halobacterium salinarum (strain ATCC 29341

Query: 1 DVILAIGEQM 10
DVI IGEQ
Sbjct: 328 DVITDIGEQT 337




84|Sequence|416|425|IGEQMVQNAE

>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 IGEQMVQNA 9
+GE++V+NA
Sbjct: 508 VGEELVRNA 516


>sp|SYS_SULAC|SERINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 EQMVQNAE 10
E+M++NAE
Sbjct: 321 EEMIENAE 328


>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 GEQMVQNAE 10
GE ++ NAE
Sbjct: 383 GESIIHNAE 391


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IGEQMVQN 8
+ E+MVQN
Sbjct: 801 VAEEMVQN 808


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 1 IGEQMVQNAE 10
IGE+ ++NAE
Sbjct: 186 IGEEDIKNAE 195




85|Sequence|421|430|VQNAEDVYEA

>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VQNAEDVYEA 10
+QNAE++++A
Sbjct: 324 LQNAEEIFQA 333


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 2 QNAEDVYEA 10
++AEDV+EA
Sbjct: 80 EDAEDVHEA 88


>sp|SYS_PICTO|SERINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 VQNAEDVYEA 10
V+N+ED+Y++
Sbjct: 321 VRNSEDIYKS 330


>sp|GCSH_THEAC|PROBABLE glycine cleavage system H|Thermoplasma acidophilum (strain ATCC

Query: 1 VQNAEDVY 8
V++AEDVY
Sbjct: 65 VKSAEDVY 72


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QNAEDVYE 9
++AED+YE
Sbjct: 238 EDAEDIYE 245


>sp|MFNB_ARCFU|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VQNAEDVYE 9
V+NAE+ YE
Sbjct: 92 VKNAEEAYE 100


>sp|GCSH_THEVO|PROBABLE glycine cleavage system H|Thermoplasma volcanium (strain ATCC

Query: 1 VQNAEDVY 8
V++AEDVY
Sbjct: 63 VKSAEDVY 70


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 VQNAEDVYE 9
+QNAE++++
Sbjct: 324 IQNAEEIFQ 332


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 1 VQNAEDV 7
VQNAED+
Sbjct: 120 VQNAEDL 126


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 4 AEDVYEA 10
AED YEA
Sbjct: 66 AEDTYEA 72


>sp|G3P_METST|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 QNAEDVYE 9
QN D+YE
Sbjct: 93 QNKTDIYE 100


>sp|Y408_ARCFU|UNCHARACTERIZED protein AF_0408|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NAEDVYEA 10
+AE+VYEA
Sbjct: 243 DAEEVYEA 250




86|Sequence|426|435|DVYEAVRTQS

>sp|Y939_AERPE|UPF0248 protein APE_0939|Aeropyrum pernix (strain ATCC 700893

Query: 1 DVYEAVR 7
D+YEAVR
Sbjct: 7 DIYEAVR 13


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DVYEAVR 7
DVY AVR
Sbjct: 317 DVYNAVR 323


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DVYEAVRTQS 10
DVYEAV S
Sbjct: 165 DVYEAVGAYS 174


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 DVYEAV 6
DVYEAV
Sbjct: 159 DVYEAV 164


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DVYEAV 6
DVYEAV
Sbjct: 163 DVYEAV 168


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DVYEAVRTQ 9
D YE +RTQ
Sbjct: 325 DEYERLRTQ 333


>sp|SURE_METAR|5'-NUCLEOTIDASE SurE|Methanocella arvoryzae (strain DSM 22066

Query: 2 VYEAVRT 8
VYEAVR+
Sbjct: 21 VYEAVRS 27


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 DVYEAVRT 8
D++E VRT
Sbjct: 495 DIFEEVRT 502


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 DVYEAVRTQ 9
D YE +RTQ
Sbjct: 325 DEYERLRTQ 333




87|Sequence|431|440|VRTQSQLAVQ

***** No hits found ******


88|Sequence|436|445|QLAVQIRRGR

>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 2 LAVQIRRGR 10
LAV+ +RGR
Sbjct: 1005 LAVETKRGR 1013


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LAVQIRRG 9
LAV++RRG
Sbjct: 570 LAVKVRRG 577


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 2 LAVQIRRG 9
LAV++RRG
Sbjct: 570 LAVKVRRG 577


>sp|PSB_METPE|PROTEASOME subunit beta|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 QIRRGR 10
QIRRGR
Sbjct: 76 QIRRGR 81




89|Sequence|441|450|IRRGRETLTL

>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 IRRGRETLTL 10
IR G +T+T+
Sbjct: 226 IREGADTMTM 235




90|Sequence|446|458|ETLTLYVTPEVTE

>sp|COFD_METKA|2-PHOSPHO-L-LACTATE transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 ETLTLYVTPEV 11
E L LYV+P+V
Sbjct: 39 EILGLYVSPDV 49


>sp|RFRNP_AERPE|RNA-FREE ribonuclease P|Aeropyrum pernix (strain ATCC 700893

Query: 3 LTLYVTPEV 11
LT+Y+TP V
Sbjct: 53 LTVYITPSV 61


>sp|Y1354_METJA|UNCHARACTERIZED protein MJ1354|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TLTLYVTPEVT 12
TLTLY+ P ++
Sbjct: 96 TLTLYLVPNLS 106


>sp|PCNA3_AERPE|DNA polymerase sliding clamp 3|Aeropyrum pernix (strain ATCC 700893

Query: 3 LTLYVTPEV 11
LT YV+P++
Sbjct: 240 LTFYVSPKI 248


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 6 YVTPEVTE 13
YVTPE+ E
Sbjct: 515 YVTPELKE 522


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 6 YVTPEVTE 13
YVTPE+ E
Sbjct: 515 YVTPELKE 522


>sp|FEN_SULAC|FLAP endonuclease 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ETLTLYVTPEVTE 13
E L++TPEV +
Sbjct: 280 EIRKLFITPEVKK 292


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain DSM

Query: 5 LYVTPEVTE 13
+Y+TPE+ E
Sbjct: 443 IYITPELME 451


>sp|PCNA_METKA|DNA polymerase sliding clamp|Methanopyrus kandleri (strain AV19 /

Query: 3 LTLYVTPEVTE 13
LT Y+ P V E
Sbjct: 243 LTFYLAPRVEE 253


>sp|PAIA_THEAC|SPERMIDINE N(1)-acetyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 ETLTLYVTPEVT 12
E L LY+ PE T
Sbjct: 88 ELLRLYLKPEYT 99


>sp|HMD_METVS|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 5 LYVTPEVTE 13
L++ PEVTE
Sbjct: 51 LHLIPEVTE 59


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 3 LTLYVTPEVTE 13
+TLY EVT+
Sbjct: 209 ITLYTYSEVTD 219


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 3 LTLYVTPEVTE 13
+TLY EVT+
Sbjct: 209 ITLYTYSEVTD 219


>sp|RF1_THEVO|PEPTIDE chain release factor subunit|Thermoplasma volcanium (strain ATCC

Query: 1 ETLTLYVTPE 10
E ++LY+ PE
Sbjct: 31 ELISLYIPPE 40


>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 YVTPEVTE 13
Y TPEV E
Sbjct: 55 YTTPEVLE 62


>sp|FLAA_METVO|FLAGELLIN A|Methanococcus voltae

Query: 1 ETLTLYVTP 9
+ LT+YVTP
Sbjct: 77 DRLTIYVTP 85


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 ETLTLYVTPE 10
E +T+Y+ PE
Sbjct: 28 ELITIYIPPE 37


>sp|IF6_THEPD|TRANSLATION initiation factor 6|Thermofilum pendens (strain DSM 2475

Query: 1 ETLTLYVTPEV 11
E ++LY TP +
Sbjct: 5 EAISLYGTPNI 15






THE END