1|SequenceR|10|1|LAVWSVLTWM
>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)
Query: 3 VWSVLTW 9
VWS L+W
Sbjct: 943 VWSELSW 949
>sp|VP3_ROTBS|PROTEIN VP3|Rotavirus C (isolate RVC/Cow/Japan/Shintoku/1991/G2P[3]) (RV-C)
Query: 1 LAVWSVLTW 9
+ +W V TW
Sbjct: 686 MEIWDVQTW 694
>sp|Y052_OSHVF|UNCHARACTERIZED protein ORF52|Ostreid herpesvirus 1 (isolate France)
Query: 2 AVWSVLTW 9
A WSVLT+
Sbjct: 68 AYWSVLTF 75
>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 3 VWSVLTWM 10
VW LTW+
Sbjct: 1694 VWVPLTWL 1701
>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 3 VWSVLTWM 10
VW LTW+
Sbjct: 1664 VWVPLTWL 1671
>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 3 VWSVLTWM 10
VW LTW+
Sbjct: 1694 VWVPLTWL 1701
>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 3 VWSVLTWM 10
VW LTW+
Sbjct: 1694 VWVPLTWL 1701
>sp|RDRP_TYYVF|PROTEIN P1-P2|Turnip yellows virus (isolate FL-1)
Query: 4 WSVLTWM 10
WSV WM
Sbjct: 841 WSVADWM 847
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2155 IWSLMAW 2161
>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)
Query: 4 WSVLTWM 10
W LTW+
Sbjct: 928 WDELTWL 934
>sp|RDRP_PNLV|PROTEIN P2-P3|Poinsettia latent virus (isolate Euphorbia
Query: 4 WSVLTWM 10
WSV WM
Sbjct: 909 WSVSDWM 915
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2155 IWSLIAW 2161
>sp|RDRP_PLRVW|PROTEIN P1-P2|Potato leafroll virus (strain
Query: 4 WSVLTWM 10
WSV WM
Sbjct: 871 WSVAYWM 877
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 1989 IWSLIAW 1995
>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain
Query: 4 WSVLTWM 10
WSV WM
Sbjct: 871 WSVAYWM 877
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 AVWSVLTWM 10
++W+ +TWM
Sbjct: 613 SIWNNMTWM 621
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 598 IWNNMTWM 605
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2156 IWSLVAW 2162
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2156 IWSLVAW 2162
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 608 IWNNMTWM 615
2|SequenceR|15|6|VLGATLAVWS
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 1 VLGATLAVW 9
+ GAT A+W
Sbjct: 432 IQGATFALW 440
>sp|PB2_QRFVE|POLYMERASE basic protein 2|Quaranfil virus (isolate
Query: 2 LGATLAVW 9
LGAT +W
Sbjct: 450 LGATRGIW 457
3|SequenceR|20|11|CRTGAVLGAT
>sp|TOP2_ASFWA|DNA topoisomerase 2|African swine fever virus (isolate
Query: 1 CRTGAVLG 8
CRTG+V+
Sbjct: 246 CRTGSVMA 253
>sp|TOP2_ASFP4|DNA topoisomerase 2|African swine fever virus (isolate
Query: 1 CRTGAVLG 8
CRTG+V+
Sbjct: 246 CRTGSVMA 253
>sp|TOP2_ASFB7|DNA topoisomerase 2|African swine fever virus (strain
Query: 1 CRTGAVLG 8
CRTG+V+
Sbjct: 246 CRTGSVMA 253
>sp|DPO23_BPK64|PROBABLE tail spike protein|Klebsiella phage K64-1 (Bacteriophage K64-1)
Query: 2 RTGAVLGAT 10
+TGAVLG++
Sbjct: 252 QTGAVLGSS 260
>sp|ADPRM_MIMIV|PUTATIVE ADP-ribosyl glycohydrolase L543|Acanthamoeba polyphaga mimivirus
Query: 1 CRTGAVLGA 9
C TGA+ GA
Sbjct: 283 CITGALFGA 291
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 RTGAVLGAT 10
R GA+LG T
Sbjct: 3516 RDGAILGVT 3524
>sp|CAPSD_CDDV1|CAPSID protein|Chaetoceros diatodnavirus 1 (Chaetoceros setoense
Query: 1 CRTGAVLGAT 10
CRT + GAT
Sbjct: 318 CRTNSGAGAT 327
4|SequenceR|25|16|FQGDPCRTGA
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FQGDPCRTGA 10
+ GDPC GA
Sbjct: 473 YSGDPCYNGA 482
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 FQGDPCRTGA 10
+ GDPC GA
Sbjct: 473 YSGDPCYNGA 482
>sp|VL1_MMPV1|MAJOR capsid protein L1|Macaca mulata papillomavirus 1 (Rhpv
Query: 2 QGDPCRTGA 10
+G+PC TGA
Sbjct: 170 KGNPCTTGA 178
>sp|TOP2_ASFP4|DNA topoisomerase 2|African swine fever virus (isolate
Query: 1 FQGDPCRTGA 10
+ PCRTG+
Sbjct: 241 YNDKPCRTGS 250
>sp|TOP2_ASFB7|DNA topoisomerase 2|African swine fever virus (strain
Query: 1 FQGDPCRTGA 10
+ PCRTG+
Sbjct: 241 YNDKPCRTGS 250
>sp|TOP2_ASFWA|DNA topoisomerase 2|African swine fever virus (isolate
Query: 1 FQGDPCRTGA 10
+ PCRTG+
Sbjct: 241 YNEKPCRTGS 250
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 2 QGDPC 6
QGDPC
Sbjct: 445 QGDPC 449
>sp|GLYC_RSVT|PUTATIVE envelope glycoprotein|Rice stripe virus (isolate T)
Query: 1 FQGDPCRT 8
F+G+ CRT
Sbjct: 460 FEGEGCRT 467
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 FQGDPCRTG 9
F+G P +TG
Sbjct: 2021 FEGPPIKTG 2029
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 FQGDPCRTG 9
F+G P +TG
Sbjct: 2021 FEGPPIKTG 2029
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 PCRTGA 10
PC TGA
Sbjct: 466 PCETGA 471
5|SequenceR|30|21|CAVPCFQGDP
>sp|POLG_ASGVP|GENOME polyprotein|Apple stem grooving virus (strain
Query: 1 CAVPCFQGDP 10
C VP F DP
Sbjct: 1127 CHVPVFDTDP 1136
>sp|POLG_ASGVK|GENOME polyprotein|Apple stem grooving virus (strain
Query: 1 CAVPCFQGDP 10
C VP F DP
Sbjct: 1127 CHVPVFDTDP 1136
>sp|VP2_EHDV1|OUTER capsid protein VP2|Epizootic hemorrhagic disease virus 1
Query: 4 PCFQGD 9
PCF+GD
Sbjct: 576 PCFRGD 581
>sp|RDRP_CARMV|RNA-DIRECTED RNA polymerase|Carnation mottle virus (CarMV)
Query: 1 CAVPCFQGD 9
C + CF+GD
Sbjct: 492 CYLACFEGD 500
>sp|RDRP_CARMS|PROBABLE RNA-directed RNA polymerase|Carnation mottle virus (isolate
Query: 1 CAVPCFQGD 9
C + CF+GD
Sbjct: 492 CYLACFEGD 500
>sp|RIR1_ASFWA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate
Query: 3 VPCFQGD 9
+PC++GD
Sbjct: 426 IPCWEGD 432
>sp|RIR1_ASFP4|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate
Query: 3 VPCFQGD 9
+PC++GD
Sbjct: 426 IPCWEGD 432
>sp|RIR1_ASFB7|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (strain
Query: 3 VPCFQGD 9
+PC++GD
Sbjct: 426 IPCWEGD 432
>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain
Query: 1 CAVPCFQGDP 10
C +P F G+P
Sbjct: 462 CKLPTFLGNP 471
>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain
Query: 1 CAVPCFQGDP 10
C +P F G+P
Sbjct: 462 CKLPTFLGNP 471
>sp|RDRP_PAV|RNA-DIRECTED RNA polymerase|Pariacoto virus (PaV)
Query: 5 CFQGDP 10
C QGDP
Sbjct: 248 CIQGDP 253
>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain
Query: 1 CAVPCFQGDP 10
C +P F G+P
Sbjct: 462 CKLPTFLGNP 471
>sp|NRAM_I91A0|NEURAMINIDASE A virus (strain A/Equine/Alaska/1/1991
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I90A1|NEURAMINIDASE A virus (strain A/Mallard/Edmonton/220/1990
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I86A3|NEURAMINIDASE A virus (strain A/Equine/Tennessee/5/1986
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|EXO2_BPR69|EXONUCLEASE subunit 2|Escherichia phage RB69 (Bacteriophage RB69)
Query: 1 CAVPCFQGDP 10
CA QGDP
Sbjct: 291 CASQLHQGDP 300
>sp|NRAM_I81A2|NEURAMINIDASE A virus (strain A/Equine/Kentucky/1/1981)
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I78AC|NEURAMINIDASE A virus (strain A/Turkey/Minnesota/501/1978
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I68A3|NEURAMINIDASE A virus (strain A/Turkey/Ontario/6118/1968
Query: 1 CAVPCF 6
C VPCF
Sbjct: 418 CTVPCF 423
>sp|GLYC_TACVF|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain Franze-Fernandez)
Query: 4 PCFQGD 9
PCF+G+
Sbjct: 216 PCFEGE 221
>sp|NRAM_I72A0|NEURAMINIDASE A virus (strain A/Equine/Algiers/1972
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I63A1|NEURAMINIDASE A virus (strain A/Turkey/Canada/1963
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I79A6|NEURAMINIDASE A virus (strain A/Equine/New
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I85A5|NEURAMINIDASE A virus (strain A/Equine/Santiago/1/1985
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I74A2|NEURAMINIDASE A virus (strain A/Duck/Memphis/928/1974
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I65A0|NEURAMINIDASE A virus (strain A/Quail/Italy/1117/1965
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|GLYC_TAMVU|PRE-GLYCOPROTEIN polyprotein GP complex|Tamiami mammarenavirus (isolate Rat/United
Query: 5 CFQGDP 10
CF+G+P
Sbjct: 132 CFEGNP 137
>sp|NRAM_I89A7|NEURAMINIDASE A virus (strain A/Equine/Jillin/1/1989
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I88A4|NEURAMINIDASE A virus (strain A/Herring
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I84A0|NEURAMINIDASE A virus (strain A/Guinea
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I72A5|NEURAMINIDASE A virus (strain A/Shearwater/Australia/1972
Query: 1 CAVPCF 6
C VPCF
Sbjct: 414 CIVPCF 419
>sp|NRAM_I72A1|NEURAMINIDASE A virus (strain A/Duck/Chabarovsk/1610/1972
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I88A1|NEURAMINIDASE A virus (strain A/Duck/Burjatia/652/1988
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I83A4|NEURAMINIDASE A virus (strain A/Turkey/Ireland/1378/1983
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I80A6|NEURAMINIDASE A virus (strain A/Duck/Hokkaido/8/1980
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I63A3|NEURAMINIDASE A virus (strain A/Duck/Ukraine/1/1963
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|GLYC_TACVT|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain TRVL 11598)
Query: 4 PCFQGD 9
PCF+G+
Sbjct: 204 PCFEGE 209
>sp|NRAM_I69A2|NEURAMINIDASE A virus (strain A/Equine/Sao
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I63A2|NEURAMINIDASE A virus (strain A/Equine/Miami/1/1963
Query: 1 CAVPCF 6
C VPCF
Sbjct: 417 CLVPCF 422
>sp|NRAM_I79A7|NEURAMINIDASE A virus (strain A/Grey
Query: 1 CAVPCF 6
C VPCF
Sbjct: 418 CTVPCF 423
>sp|GLYC_TACV5|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain V5) (TCRV)
Query: 4 PCFQGD 9
PCF+G+
Sbjct: 204 PCFEGE 209
>sp|POL2_GCMV|RNA2 polyprotein|Grapevine chrome mosaic virus (GCMV)
Query: 1 CAVPCFQ 7
CAVP F+
Sbjct: 237 CAVPSFE 243
>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)
Query: 1 CAVPCFQGDP 10
C V FQG P
Sbjct: 1407 CYVRLFQGPP 1416
6|SequenceR|35|26|GPDLCCAVPC
>sp|MVP_SCSVF|PUTATIVE movement protein|Subterranean clover stunt virus (strain
Query: 4 LCCAVP 9
LCCAVP
Sbjct: 46 LCCAVP 51
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 2 PDLCCAVP 9
P +CCA+P
Sbjct: 496 PSMCCALP 503
>sp|U6_HHV6Z|UNCHARACTERIZED protein U6|Human herpesvirus 6B (strain Z29)
Query: 2 PDLCCAVPC 10
P+L AVPC
Sbjct: 2 PNLAAAVPC 10
>sp|U6_HHV6U|UNCHARACTERIZED protein U6|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PDLCCAVPC 10
P+L AVPC
Sbjct: 16 PNLAAAVPC 24
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 GPDLCCAVP 9
GPD C +VP
Sbjct: 316 GPDGCQSVP 324
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 2 PDLCCAVP 9
P CCA+P
Sbjct: 512 PATCCALP 519
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 2 PDLCCAVP 9
P CCA+P
Sbjct: 512 PATCCALP 519
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 2 PDLCCAVPC 10
PD CAV C
Sbjct: 373 PDKECAVTC 381
>sp|VPHE_NPVLD|POLYHEDRAL envelope protein|Lymantria dispar multicapsid nuclear polyhedrosis
Query: 3 DLCCAVP 9
D CCA P
Sbjct: 108 DACCAQP 114
>sp|PLOD_MIMIV|PROCOLLAGEN lysyl hydroxylase and glycosyltransferase|Acanthamoeba polyphaga
Query: 3 DLCCAVPC 10
D C +PC
Sbjct: 320 DFCNTIPC 327
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 GPDLCCAVP 9
G D+ CA+P
Sbjct: 678 GEDIFCAMP 686
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 GPDLCCAVP 9
G D+ CA+P
Sbjct: 678 GEDIFCAMP 686
>sp|PG136_VACCW|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Western
Query: 1 GPDLCCAVP 9
G D+ CA+P
Sbjct: 677 GEDIFCAMP 685
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 1 GPDLCCAVP 9
G D+ CA+P
Sbjct: 677 GEDIFCAMP 685
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 GPDLCCAVP 9
G D+ CA+P
Sbjct: 677 GEDIFCAMP 685
>sp|VG61_BPML5|GENE 61 protein|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 1 GPDLCCAVP 9
G D+C A P
Sbjct: 89 GADICLAFP 97
>sp|POL_SIVG1|GAG-POL polyprotein|Simian immunodeficiency virus agm.grivet (isolate
Query: 3 DLCCAVPC 10
+LCC + C
Sbjct: 80 NLCCVIWC 87
>sp|002L_FRG3G|UNCHARACTERIZED protein 002L|Frog virus 3 (isolate Goorha)
Query: 2 PDLCCAVPC 10
PD C VPC
Sbjct: 201 PDQCWYVPC 209
>sp|GAG_SIVG1|GAG polyprotein|Simian immunodeficiency virus agm.grivet (isolate
Query: 3 DLCCAVPC 10
+LCC + C
Sbjct: 80 NLCCVIWC 87
7|SequenceR|40|31|SYSAGGPDLC
>sp|SPIKE_IBVM|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SYSAGGPDLC 10
+YS GGP LC
Sbjct: 372 AYSYGGPSLC 381
>sp|SPIKE_IBVB|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SYSAGGPDLC 10
+YS GGP LC
Sbjct: 372 AYSYGGPSLC 381
>sp|DPOL_EHV1V|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain V592)
Query: 1 SYSAGGPD 8
SY AGGPD
Sbjct: 557 SYYAGGPD 564
>sp|DPOL_EHV1B|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain Ab4p)
Query: 1 SYSAGGPD 8
SY AGGPD
Sbjct: 557 SYYAGGPD 564
>sp|SPIKE_IBVK|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SYSAGGPDLC 10
+YS GGP LC
Sbjct: 372 AYSYGGPLLC 381
>sp|SPIKE_IBVD2|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SYSAGGPDLC 10
+YS GP LC
Sbjct: 373 AYSYNGPSLC 382
>sp|SPIKE_IBV6|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SYSAGGPDLC 10
+YS GP LC
Sbjct: 373 AYSYNGPSLC 382
>sp|Y047_OSHVF|UNCHARACTERIZED protein ORF47|Ostreid herpesvirus 1 (isolate France)
Query: 4 AGGPDL 9
AGGPDL
Sbjct: 405 AGGPDL 410
>sp|SPIKE_IBVU2|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SYSAGGPDLC 10
+YS GP LC
Sbjct: 355 AYSYNGPSLC 364
>sp|SPIKE_IBVU3|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SYSAGGPDLC 10
+YS GP LC
Sbjct: 355 AYSYNGPSLC 364
>sp|VG58_SHV21|GENE 58 protein|Saimiriine herpesvirus 2 (strain 11)
Query: 5 GGPDLC 10
GGP LC
Sbjct: 328 GGPKLC 333
>sp|SPIKE_IBVU1|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SYSAGGPDLC 10
+YS GP LC
Sbjct: 355 AYSYNGPPLC 364
>sp|SPIKE_IBVD3|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 SYSAGGPDLC 10
+YS GP LC
Sbjct: 373 AYSYNGPPLC 382
>sp|ENLYS_METM2|PSEUDOMUREIN endoisopeptidase|Methanobacterium phage psiM2 (PsiM2)
Query: 2 YSAGGPDL 9
YS GGP +
Sbjct: 117 YSGGGPSV 124
>sp|POL1_BAYMY|GENOME polyprotein 1|Barley yellow mosaic virus (isolate
Query: 1 SYSAGGPDLC 10
SYSA DLC
Sbjct: 1679 SYSAYYKDLC 1688
>sp|POL1_BAYMJ|GENOME polyprotein 1|Barley yellow mosaic virus (strain
Query: 1 SYSAGGPDLC 10
SYSA DLC
Sbjct: 1679 SYSAYYKDLC 1688
>sp|POL1_BAYMG|GENOME polyprotein 1|Barley yellow mosaic virus (isolate
Query: 1 SYSAGGPDLC 10
SYSA DLC
Sbjct: 1680 SYSAYYKDLC 1689
>sp|DPOLA_BPPM6|DNA-DIRECTED DNA polymerase|Pseudomonas phage M6
Query: 1 SYSAGGPDLC 10
SY GG +C
Sbjct: 472 SYGMGGAKMC 481
8|SequenceR|45|36|LPRCCSYSAG
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 1 LPRCCSYSAG 10
LPR C+Y+ G
Sbjct: 390 LPRGCTYTFG 399
>sp|POLG_BSTV1|GENOME polyprotein|Brome streak virus (strain 11-Cal)
Query: 2 PRCCSYS 8
P+CCS S
Sbjct: 136 PKCCSAS 142
>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore
Query: 5 CSYSAG 10
CSYSAG
Sbjct: 186 CSYSAG 191
>sp|YL594_MIMIV|UNCHARACTERIZED protein L594|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 LPRCCSY 7
L RCC Y
Sbjct: 333 LGRCCGY 339
>sp|VL1_BPV4|MAJOR capsid protein L1|Bos taurus papillomavirus 4 (Bovine
Query: 3 RCCSYSAG 10
RCCS +G
Sbjct: 59 RCCSQMSG 66
>sp|SPIKE_BRV1|SPIKE glycoprotein|Breda virus 1 (BRV-1)
Query: 1 LPRCCSYS 8
LP CC Y+
Sbjct: 354 LPDCCLYT 361
>sp|UL30_HCMVA|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPRCCSYS 8
LP CC S
Sbjct: 100 LPNCCQVS 107
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PRCCSYSAG 10
P CS+SAG
Sbjct: 22 PPSCSFSAG 30
9|SequenceR|50|41|PWKDLLPRCC
>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)
Query: 2 WKDLLPRCC 10
W +++P CC
Sbjct: 1960 WSEIMPVCC 1968
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 WKDLLPRC 9
WK LL RC
Sbjct: 1123 WKQLLSRC 1130
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 WKDLLPRC 9
WK LL RC
Sbjct: 1124 WKQLLSRC 1131
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 2 WKDLLPRC 9
WK LL RC
Sbjct: 1123 WKQLLSRC 1130
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 WKDLLPRC 9
WK LL RC
Sbjct: 1123 WKQLLSRC 1130
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 WKDLLPRC 9
WK LL RC
Sbjct: 1121 WKQLLSRC 1128
>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 2 WKDLLPR 8
WK+L PR
Sbjct: 415 WKELTPR 421
>sp|RNL1_NPVAC|PUTATIVE bifunctional polynucleotide kinase/RNA ligase|Autographa
Query: 1 PWKDLLPRC 9
PWK L RC
Sbjct: 335 PWKCLAYRC 343
>sp|RDRP_PVXHB|RNA replication protein|Potato virus X (strain HB)
Query: 1 PWKDLLPR 8
PWK LP+
Sbjct: 618 PWKHWLPQ 625
>sp|ORF3_TTVG1|UNCHARACTERIZED ORF3 protein|Torque teno midi virus 1
Query: 3 KDLLPRC 9
K LLPRC
Sbjct: 155 KTLLPRC 161
>sp|RDRP_PVXCP|RNA replication protein|Potato virus X (strain CP)
Query: 1 PWKDLLPR 8
PWK LP+
Sbjct: 618 PWKHWLPQ 625
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 2 WKDLLPRCC 10
W+DL+ R C
Sbjct: 310 WRDLVKRRC 318
>sp|REP_PCV2|REPLICATION-ASSOCIATED protein|Porcine circovirus 2 (PCV2)
Query: 1 PWKDLLPRC 9
PW DLL C
Sbjct: 222 PWDDLLRLC 230
>sp|REP_PCV1|REPLICATION-ASSOCIATED protein|Porcine circovirus 1 (PCV1)
Query: 1 PWKDLLPRC 9
PW DLL C
Sbjct: 219 PWDDLLRLC 227
>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)
Query: 2 WKDLLPRCC 10
W+DL+ R C
Sbjct: 310 WRDLVKRRC 318
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 WKDLLPR 8
WKDLL +
Sbjct: 1992 WKDLLKK 1998
>sp|COAT_TRVPS|COAT protein|Tobacco rattle virus (strain PSG)
Query: 2 WKDLLPR 8
WKDLL +
Sbjct: 29 WKDLLKK 35
>sp|COAT_TRVPL|COAT protein|Tobacco rattle virus (strain PLB)
Query: 2 WKDLLPR 8
WKDLL +
Sbjct: 29 WKDLLKK 35
>sp|CAPSD_TRVPP|CAPSID protein|Tobacco rattle virus (isolate PpK20)
Query: 2 WKDLLPR 8
WKDLL +
Sbjct: 29 WKDLLKK 35
>sp|HBSAG_WHV6|LARGE envelope protein|Woodchuck hepatitis B virus (isolate
Query: 2 WKDLLPRC 9
WK LLP C
Sbjct: 168 WKGLLPVC 175
>sp|HBSAG_GSHV|LARGE envelope protein|Ground squirrel hepatitis virus (strain
Query: 2 WKDLLPRC 9
WK LLP C
Sbjct: 304 WKGLLPVC 311
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 1 PWKDLLPR 8
P+K LLPR
Sbjct: 557 PYKCLLPR 564
>sp|VF257_ASFB7|TRANSMEMBRANE protein C257L|African swine fever virus (strain
Query: 2 WKDLLP 7
WKDL+P
Sbjct: 228 WKDLIP 233
>sp|VF257_ASFK5|TRANSMEMBRANE protein C257L|African swine fever virus (isolate
Query: 2 WKDLLP 7
WKDL+P
Sbjct: 228 WKDLIP 233
10|SequenceR|55|46|RSLTTPWKDL
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 LTTPWKD 9
+ TPWKD
Sbjct: 66 MNTPWKD 72
>sp|P7_RGDV|PROTEIN P7|Rice gall dwarf virus (RGDV)
Query: 3 LTTPWKDL 10
L TP+KDL
Sbjct: 234 LNTPFKDL 241
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 SLTTPWKDL 10
+L PW+DL
Sbjct: 81 TLEAPWQDL 89
>sp|MATRX_RINDR|MATRIX protein|Rinderpest virus (strain RBOK) (RDV)
Query: 2 SLTTPWKDL 10
SL TPWK +
Sbjct: 120 SLLTPWKKI 128
>sp|NS1AB_TASV2|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 2 (TAstV-2)
Query: 3 LTTPWK 8
L TPWK
Sbjct: 1190 LVTPWK 1195
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 RSLTTPW 7
R +TTPW
Sbjct: 217 RCVTTPW 223
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 RSLTTPWKD 9
LTT WKD
Sbjct: 716 EGLTTVWKD 724
>sp|DPOL_ADEG1|DNA polymerase|Fowl adenovirus A serotype 1
Query: 6 PWKDL 10
PWKDL
Sbjct: 1043 PWKDL 1047
11|SequenceR|60|51|PGGLHRSLTT
>sp|CAPSD_DSDNV|CAPSID protein VP1|Diatraea saccharalis densovirus (DsDNV)
Query: 2 GGLHRSLTT 10
G LHR LTT
Sbjct: 435 GNLHRLLTT 443
>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is
Query: 2 GGLHRSL 8
GG HRSL
Sbjct: 621 GGSHRSL 627
12|SequenceR|65|56|ADVQCPGGLH
>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)
Query: 2 DVQCPGGLH 10
D+ CP GLH
Sbjct: 525 DLLCPCGLH 533
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 492 AFITCPGDLH 501
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 491 AFITCPGDLH 500
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 491 AFITCPGDLH 500
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 492 AFITCPGDLH 501
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 491 AFITCPGDLH 500
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 491 AFITCPGDLH 500
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VQCPGGLH 10
V CP G+H
Sbjct: 1133 VHCPDGIH 1140
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VQCPGGLH 10
V CP G+H
Sbjct: 1133 VHCPDGIH 1140
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VQCPGGLH 10
V CP G+H
Sbjct: 1133 VHCPDGIH 1140
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VQCPGGLH 10
V CP G+H
Sbjct: 1133 VHCPDGIH 1140
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VQCPGGLH 10
V CP G+H
Sbjct: 1133 VHCPDGIH 1140
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 491 AFLTCPGDLH 500
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 491 AFLTCPGDLH 500
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 5 CPGGL 9
CPGGL
Sbjct: 147 CPGGL 151
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 5 CPGGL 9
CPGGL
Sbjct: 147 CPGGL 151
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ADVQCP 6
+D+QCP
Sbjct: 64 SDIQCP 69
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ADVQCP 6
+D+QCP
Sbjct: 64 SDIQCP 69
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ADVQCP 6
+D+QCP
Sbjct: 64 SDIQCP 69
>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)
Query: 4 QCPGGL 9
+CPGG+
Sbjct: 1527 ECPGGI 1532
>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)
Query: 4 QCPGGL 9
+CPGG+
Sbjct: 1527 ECPGGI 1532
>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 4 QCPGGL 9
+CPGG+
Sbjct: 1527 ECPGGI 1532
>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 4 QCPGGL 9
+CPGG+
Sbjct: 1527 ECPGGI 1532
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 4 QCPGGL 9
+CPGG+
Sbjct: 1573 ECPGGI 1578
>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)
Query: 4 QCPGGL 9
+CPGG+
Sbjct: 1527 ECPGGI 1532
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 4 QCPGGL 9
+CPGG+
Sbjct: 1527 ECPGGI 1532
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 4 QCPGGL 9
+CPGG+
Sbjct: 1527 ECPGGI 1532
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 4 QCPGGL 9
+CPGG+
Sbjct: 1527 ECPGGI 1532
>sp|VP4_ROTB5|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 VQCPGG 8
V CPGG
Sbjct: 378 VMCPGG 383
>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)
Query: 4 QCPGGL 9
+CPGG+
Sbjct: 1573 ECPGGI 1578
>sp|CATV_NPVEP|VIRAL cathepsin|Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)
Query: 2 DVQCPGGL 9
DV C GGL
Sbjct: 171 DVGCEGGL 178
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 ADVQCPGG 8
ADV+ PGG
Sbjct: 554 ADVELPGG 561
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 ADVQCPGG 8
ADV+ PGG
Sbjct: 554 ADVELPGG 561
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ADVQCPGGLH 10
AD CPGG +
Sbjct: 1301 ADGGCPGGAY 1310
>sp|CATV_NPVAP|VIRAL cathepsin|Antheraea pernyi nuclear polyhedrosis virus
Query: 2 DVQCPGGL 9
DV C GGL
Sbjct: 172 DVGCDGGL 179
>sp|VP2_POVM3|MINOR capsid protein VP2|Murine polyomavirus (strain A3) (MPyV)
Query: 4 QCPGGLH 10
Q PGG H
Sbjct: 274 QAPGGAH 280
>sp|REEP_CSIV|REPEAT element protein|Campoletis sonorensis ichnovirus (CsIV)
Query: 4 QCPGGLH 10
+C GG+H
Sbjct: 137 RCSGGIH 143
>sp|ORF32_VZVO|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Oka vaccine)
Query: 5 CPGGLH 10
CPGG H
Sbjct: 89 CPGGRH 94
>sp|ORF32_VZVD|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 CPGGLH 10
CPGG H
Sbjct: 89 CPGGRH 94
>sp|VF199_ASFWA|INNER membrane protein E199L|African swine fever virus (isolate
Query: 4 QCPGGL 9
QCP GL
Sbjct: 112 QCPSGL 117
>sp|VF199_ASFK5|INNER membrane protein E199L|African swine fever virus (isolate
Query: 4 QCPGGL 9
QCP GL
Sbjct: 112 QCPSGL 117
>sp|VF199_ASFP4|INNER membrane protein E199L|African swine fever virus (isolate
Query: 4 QCPGGL 9
QCP GL
Sbjct: 112 QCPSGL 117
>sp|VF199_ASFM2|INNER membrane protein E199L|African swine fever virus (isolate
Query: 4 QCPGGL 9
QCP GL
Sbjct: 112 QCPSGL 117
>sp|VF199_ASFB7|INNER membrane protein E199L|African swine fever virus (strain
Query: 4 QCPGGL 9
QCP GL
Sbjct: 112 QCPSGL 117
13|SequenceR|70|61|GASCHADVQC
>sp|YL594_MIMIV|UNCHARACTERIZED protein L594|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 CHADVQC 10
CH D++C
Sbjct: 141 CHCDIEC 147
>sp|REP_PASVK|REPLICATION-ASSOCIATED protein|Panicum streak virus (isolate Kenya)
Query: 4 CHADVQC 10
CHA +QC
Sbjct: 68 CHALLQC 74
>sp|REPA_PASVK|REPLICATION-ASSOCIATED protein A|Panicum streak virus (isolate Kenya)
Query: 4 CHADVQC 10
CHA +QC
Sbjct: 68 CHALLQC 74
>sp|RDRP_PSVJ|RNA-DIRECTED RNA polymerase 2a|Peanut stunt virus (strain J)
Query: 1 GASCHADV 8
GA CHA +
Sbjct: 710 GAECHASL 717
>sp|VP6_MPRVN|UNCHARACTERIZED protein VP6|Micromonas pusilla reovirus (isolate
Query: 1 GASCHADVQ 9
G C ADVQ
Sbjct: 59 GTLCSADVQ 67
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 GASCHADVQC 10
G CH V C
Sbjct: 5 GCVCHLGVYC 14
14|SequenceR|75|66|FICSHGASCH
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 FICSHGASCH 10
F+CS+ A+CH
Sbjct: 817 FVCSNYAACH 826
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 FICSHGASCH 10
F+CS+ A+CH
Sbjct: 817 FVCSNYAACH 826
>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate
Query: 3 CSHGASC 9
CSHG+ C
Sbjct: 384 CSHGSEC 390
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 FICSHGASCH 10
F+CS+ A+CH
Sbjct: 821 FVCSNYAACH 830
>sp|VG75_ICHVA|UNCHARACTERIZED protein ORF75|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 FICSHG--ASC 9
++CSHG ASC
Sbjct: 138 YLCSHGVTASC 148
>sp|CAPSD_BPE32|MAJOR capsid protein|Escherichia phage Phieco32 (Escherichia coli
Query: 1 FICSHGA 7
F+C+HG
Sbjct: 169 FLCAHGG 175
>sp|UL15B_PSHV1|LARGE terminase protein homolog UL15b|Psittacid herpesvirus 1 (isolate
Query: 1 FICSHGA 7
+ CSHGA
Sbjct: 434 YFCSHGA 440
>sp|SHUT_ADEGX|SHUTOFF protein|Fowl adenovirus C serotype 10
Query: 1 FICSHGA 7
F+C+HG
Sbjct: 577 FLCNHGG 583
>sp|ENV_THOGV|ENVELOPE glycoprotein|Thogoto virus (isolate SiAr 126)
Query: 3 CSHGASCH 10
CS+G CH
Sbjct: 106 CSYGDICH 113
>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 ICSHGA 7
IC HGA
Sbjct: 174 ICQHGA 179
>sp|ORF3_TTVT1|UNCHARACTERIZED ORF2 protein|Torque teno canis virus (isolate
Query: 4 SHGASCH 10
SHG CH
Sbjct: 43 SHGLWCH 49
>sp|SPIKE_CVMJH|SPIKE glycoprotein|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 FICSHGASC 9
F+C A+C
Sbjct: 689 FVCGDNAAC 697
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 FICSHG 6
F CSHG
Sbjct: 5047 FCCSHG 5052
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 FICSHG 6
F CSHG
Sbjct: 5067 FCCSHG 5072
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 FICSHG 6
F CSHG
Sbjct: 5097 FCCSHG 5102
15|SequenceR|80|71|TGSVTFICSH
>sp|CAPSD_MPRVN|MAJOR inner capsid protein VP3|Micromonas pusilla reovirus (isolate
Query: 1 TGSVTFIC 8
TG+V+FIC
Sbjct: 670 TGAVSFIC 677
>sp|CAPSD_BPE32|MAJOR capsid protein|Escherichia phage Phieco32 (Escherichia coli
Query: 1 TGSVTFICSH 10
TG+ F+C+H
Sbjct: 164 TGAFQFLCAH 173
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 1 TGSVTFICSH 10
TG VT CSH
Sbjct: 145 TGGVTAACSH 154
>sp|YIM2_BPPH1|UNCHARACTERIZED immunity region protein 2|Bacillus phage phi105 (Bacteriophage
Query: 5 TFICSH 10
TF+CSH
Sbjct: 73 TFVCSH 78
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 5 TFICSH 10
TF+C+H
Sbjct: 217 TFVCNH 222
16|SequenceR|85|76|PCCSSTGSVT
>sp|POL2_TRSV|RNA2 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)
Query: 2 CCSSTGSV 9
CC+STG V
Sbjct: 227 CCASTGEV 234
>sp|VF050_IIV3|UNCHARACTERIZED protein 094L|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 PCCSSTGS 8
P C++TGS
Sbjct: 425 PICATTGS 432
>sp|CAPSD_RCNMV|CAPSID protein|Red clover necrotic mosaic virus
Query: 3 CSSTGSVT 10
CS+TGSVT
Sbjct: 267 CSTTGSVT 274
17|SequenceR|90|81|VAEPFPCCSS
>sp|RDRP_ACLSA|RNA-DIRECTED RNA polymerase|Apple chlorotic leaf spot virus
Query: 1 VAEPFPC 7
+AEP PC
Sbjct: 656 IAEPVPC 662
>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)
Query: 4 PFPCCSS 10
PFPC S+
Sbjct: 635 PFPCVSN 641
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 4 PFPCCSS 10
PFPC S+
Sbjct: 214 PFPCMSN 220
>sp|DUHM_BPPM6|DEOXYURIDYLATE hydroxymethyltransferase|Pseudomonas phage M6
Query: 1 VAEPFPCCSS 10
+AEP+P S+
Sbjct: 248 IAEPYPLMST 257
>sp|GPB_BPPM2|UNCHARACTERIZED protein Gp-b*|Pseudoalteromonas phage PM2 (Bacteriophage PM2)
Query: 1 VAEPFPCC 8
+ PFPCC
Sbjct: 15 ILSPFPCC 22
>sp|NS5B_IBVB|HOST translation inhibitor 5b|Avian infectious bronchitis virus
Query: 2 AEPFPCCSS 10
AEP P C+S
Sbjct: 37 AEPCPACTS 45
>sp|NS5B_IBVK|HOST translation inhibitor 5b|Avian infectious bronchitis virus
Query: 2 AEPFPCCSS 10
AEP P C+S
Sbjct: 37 AEPCPACTS 45
>sp|REP_CLVN|REPLICATION-ASSOCIATED protein|African cassava mosaic virus (isolate
Query: 4 PFPCCS 9
PFPC S
Sbjct: 182 PFPCSS 187
>sp|REP_CLVK|REPLICATION-ASSOCIATED protein|African cassava mosaic virus (isolate
Query: 4 PFPCCS 9
PFPC S
Sbjct: 182 PFPCSS 187
>sp|Y149_NPVAC|UNCHARACTERIZED 12.4 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 4 PFPCC 8
P PCC
Sbjct: 92 PLPCC 96
>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain
Query: 3 EPFPCCS 9
EPFP C+
Sbjct: 151 EPFPGCT 157
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 2 AEPFPCCSS 10
A+ + CCSS
Sbjct: 337 ADLYECCSS 345
>sp|CAPSD_SMSV1|CAPSID protein VP1|San Miguel sea lion virus
Query: 4 PFPCCSS 10
PF CC S
Sbjct: 56 PFNCCFS 62
>sp|CAPSD_VESVA|CAPSID protein VP1|Vesicular exanthema of swine virus
Query: 4 PFPCCSS 10
PF CC S
Sbjct: 56 PFNCCFS 62
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VAEPFPCCS 9
+ PFP C+
Sbjct: 641 IITPFPACT 649
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 VAEPFPCCS 9
+ PFP C+
Sbjct: 641 IITPFPACT 649
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VAEPFPCCS 9
+ PFP C+
Sbjct: 641 IITPFPACT 649
18|SequenceR|95|86|GDGCAVAEPF
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 GCAVAEPF 10
GCA+ +PF
Sbjct: 1223 GCAILQPF 1230
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GCAVAEPF 10
GC+VA PF
Sbjct: 636 GCSVAYPF 643
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 GDGCAVAEP 9
GD C VA P
Sbjct: 3172 GDDCVVAAP 3180
>sp|RDRP_P1AMV|RNA replication protein|Plantago asiatica mosaic potexvirus (P1AMV)
Query: 1 GDGCAVAE 8
GD CA+A+
Sbjct: 1256 GDDCAIAQ 1263
>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus
Query: 2 DGCAVAEPF 10
DG AV +PF
Sbjct: 1575 DGPAVEDPF 1583
>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22
Query: 1 GDGCAVAEPF 10
GD V EPF
Sbjct: 386 GDSSVVQEPF 395
>sp|Y059_OSHVF|UNCHARACTERIZED protein ORF59|Ostreid herpesvirus 1 (isolate France)
Query: 1 GDGCA 5
GDGCA
Sbjct: 555 GDGCA 559
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2386 GSACRVADPL 2395
>sp|DNBI_EHV2|MAJOR DNA-binding protein|Equine herpesvirus 2 (strain 86/87)
Query: 1 GDGCAVAEPF 10
GD C V+ P+
Sbjct: 757 GDSCVVSGPY 766
>sp|VP10_WTV|NON-STRUCTURAL protein Pns10|Wound tumor virus (WTV)
Query: 3 GCAVAEPF 10
GCA+A F
Sbjct: 4 GCAIARAF 11
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 1055 GSACRVADPL 1064
>sp|DNBI_PSHV1|MAJOR DNA-binding protein|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 GDGCAVAEPF 10
G+GCA +P
Sbjct: 231 GEGCAYPKPL 240
19|SequenceR|100|91|PCCHHGDGCA
>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)
Query: 2 CCHHGD 7
CCHHG+
Sbjct: 1199 CCHHGE 1204
>sp|DNLI_ASFB7|DNA ligase|African swine fever virus (strain
Query: 3 CHHGDGC 9
C GDGC
Sbjct: 160 CQQGDGC 166
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CCHHGD 7
CC HGD
Sbjct: 5048 CCSHGD 5053
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 CCHHGD 7
CC HGD
Sbjct: 5068 CCSHGD 5073
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CCHHGD 7
CC HGD
Sbjct: 5098 CCSHGD 5103
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 2 CCHHGDGCA 10
CC H GCA
Sbjct: 317 CCVHDAGCA 325
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 CCHH 5
CCHH
Sbjct: 190 CCHH 193
>sp|A28_FOWPN|ENVELOPE protein A28 homolog|Fowlpox virus (strain NVSL) (FPV)
Query: 1 PCCHHGDGCA 10
PC +G+G A
Sbjct: 123 PCAEYGEGSA 132
>sp|THY_BPT5|PROBABLE thymidylate synthase|Escherichia phage T5 (Enterobacteria phage
Query: 1 PCCHHGDGC 9
P CH+G C
Sbjct: 154 PPCHYGFQC 162
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PCCHHGDGC 9
PCC GC
Sbjct: 895 PCCDCTAGC 903
>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus
Query: 4 HHGDGC 9
HH +GC
Sbjct: 1556 HHANGC 1561
>sp|Y111_OSHVF|PUTATIVE transmembrane protein ORF111|Ostreid herpesvirus 1 (isolate
Query: 1 PCCHHGDGC 9
P C+H GC
Sbjct: 31 PACNHMGGC 39
>sp|NS1_ISAV8|NON-STRUCTURAL protein 1|Infectious salmon anemia virus (isolate
Query: 1 PCCHHGDGC 9
P +H DGC
Sbjct: 220 PSVYHSDGC 228
>sp|DPOL_WMHBV|PROTEIN P|Woolly monkey hepatitis B virus
Query: 1 PCCHHG 6
PC HHG
Sbjct: 339 PCQHHG 344
>sp|YL732_MIMIV|UNCHARACTERIZED protein L732|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 PCCHH 5
P CHH
Sbjct: 143 PSCHH 147
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 2 CCHHGDGCA 10
CC H GC
Sbjct: 293 CCFHDVGCG 301
>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain
Query: 2 CCHHGDGCA 10
C HH CA
Sbjct: 2228 CPHHSATCA 2236
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 3 CHHGDGCA 10
C+H GCA
Sbjct: 384 CNHKPGCA 391
>sp|YR868_MIMIV|PUTATIVE ankyrin repeat protein R868|Acanthamoeba polyphaga mimivirus
Query: 3 CHHG 6
CHHG
Sbjct: 24 CHHG 27
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 CHHG 6
CHHG
Sbjct: 996 CHHG 999
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 CHHG 6
CHHG
Sbjct: 996 CHHG 999
>sp|IORF_CVTKE|PROTEIN I|Turkey enteric coronavirus (TCoV) (TCV)
Query: 2 CCHHG 6
CCH G
Sbjct: 99 CCHDG 103
>sp|IORF_CVPIA|PROTEIN I|Porcine hemagglutinating encephalomyelitis virus (strain
Query: 2 CCHHG 6
CCH G
Sbjct: 99 CCHDG 103
>sp|IORF_CVP67|PROTEIN I|Porcine hemagglutinating encephalomyelitis virus (strain
Query: 2 CCHHG 6
CCH G
Sbjct: 99 CCHDG 103
>sp|IORF_CVHOC|PROTEIN I|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CCHHG 6
CCH G
Sbjct: 99 CCHDG 103
>sp|IORF_CVBQ|PROTEIN I|Bovine coronavirus (strain Quebec) (BCoV)
Query: 2 CCHHG 6
CCH G
Sbjct: 99 CCHDG 103
>sp|IORF_CVBOK|PROTEIN I|Bovine coronavirus (strain OK-0514) (BCoV)
Query: 2 CCHHG 6
CCH G
Sbjct: 99 CCHDG 103
>sp|IORF_CVBM|PROTEIN I|Bovine coronavirus (strain Mebus) (BCoV)
Query: 2 CCHHG 6
CCH G
Sbjct: 99 CCHDG 103
>sp|IORF_CVBLY|PROTEIN I|Bovine coronavirus (strain LY-138) (BCoV)
Query: 2 CCHHG 6
CCH G
Sbjct: 99 CCHDG 103
>sp|IORF_CVBLU|PROTEIN I|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 2 CCHHG 6
CCH G
Sbjct: 99 CCHDG 103
>sp|IORF_CVBLS|PROTEIN I|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)
Query: 2 CCHHG 6
CCH G
Sbjct: 99 CCHDG 103
>sp|IORF_CVBF|PROTEIN I|Bovine coronavirus (strain F15) (BCoV)
Query: 2 CCHHG 6
CCH G
Sbjct: 99 CCHDG 103
>sp|YL128_MIMIV|PUTATIVE GMC-type oxidoreductase L128|Acanthamoeba polyphaga mimivirus
Query: 1 PCCHHG 6
P CH+G
Sbjct: 23 PACHNG 28
>sp|VH22_MYXVL|PROBABLE host range protein 2-2|Myxoma virus (strain Lausanne) (MYXV)
Query: 1 PCCHHGDGC 9
PC H GC
Sbjct: 24 PCHGHSCGC 32
>sp|HN_SENDZ|HEMAGGLUTININ-NEURAMINIDASE virus (strain Z) (SeV)
Query: 4 HHGDGCA 10
HH DG A
Sbjct: 145 HHADGIA 151
>sp|RDRP_BYDVR|PUTATIVE RNA-directed RNA polymerase|Barley yellow dwarf virus (isolate
Query: 3 CHHGDGC 9
C++GD C
Sbjct: 658 CNNGDDC 664
>sp|RDRP_BYDVP|PUTATIVE RNA-directed RNA polymerase|Barley yellow dwarf virus (isolate
Query: 3 CHHGDGC 9
C++GD C
Sbjct: 658 CNNGDDC 664
>sp|RDRP_BYDVM|PUTATIVE RNA-directed RNA polymerase|Barley yellow dwarf virus (isolate
Query: 3 CHHGDGC 9
C++GD C
Sbjct: 658 CNNGDDC 664
>sp|YR787_MIMIV|PUTATIVE ankyrin repeat protein R787|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 CHHG 6
CHHG
Sbjct: 223 CHHG 226
>sp|DPOL_HBVCP|PROTEIN P|Chimpanzee hepatitis B virus (isolate
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 340 PCTEHGE 346
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCAEHGE 357
20|SequenceR|105|96|CHFGRPCCHH
>sp|VGLN_ARV|NON-STRUCTURAL glycoprotein|Adelaide River virus (ARV)
Query: 2 HFGRPCCHH 10
HFG+ CH+
Sbjct: 388 HFGKGSCHY 396
>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus
Query: 2 HFGRPCC 8
H G PCC
Sbjct: 91 HVGGPCC 97
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 CHFGRPC 7
C GRPC
Sbjct: 581 CVIGRPC 587
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CHFGRPC 7
C GRPC
Sbjct: 581 CVIGRPC 587
>sp|PG117_VACCW|UNCOATING factor OPG117|Vaccinia virus (strain Western Reserve)
Query: 1 CHFGRPC 7
C GRPC
Sbjct: 581 CVIGRPC 587
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CHFGRPC 7
C GRPC
Sbjct: 581 CVIGRPC 587
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 CHFGRPC 7
C GRPC
Sbjct: 581 CVIGRPC 587
>sp|VE7_BPV1|PROTEIN E7|Bovine papillomavirus type 1
Query: 1 CHFGRP 6
CHFGRP
Sbjct: 45 CHFGRP 50
>sp|VE7_BPV2|PROTEIN E7|Bos taurus papillomavirus 2 (Bovine
Query: 1 CHFGRP 6
CHFGRP
Sbjct: 45 CHFGRP 50
>sp|012L_FRG3G|UNCHARACTERIZED protein 012L|Frog virus 3 (isolate Goorha)
Query: 1 CHFGRP 6
CH GRP
Sbjct: 126 CHVGRP 131
>sp|HN_SENDZ|HEMAGGLUTININ-NEURAMINIDASE virus (strain Z) (SeV)
Query: 2 HFGRPCCHH 10
HFG+ C H
Sbjct: 538 HFGKGYCFH 546
>sp|HN_SENDO|HEMAGGLUTININ-NEURAMINIDASE virus (strain Ohita) (SeV)
Query: 2 HFGRPCCHH 10
HFG+ C H
Sbjct: 538 HFGKGYCFH 546
>sp|HN_SENDH|HEMAGGLUTININ-NEURAMINIDASE virus (strain Harris) (SeV)
Query: 2 HFGRPCCHH 10
HFG+ C H
Sbjct: 539 HFGKGYCFH 547
>sp|HN_SENDF|HEMAGGLUTININ-NEURAMINIDASE virus (strain Fushimi) (SeV)
Query: 2 HFGRPCCHH 10
HFG+ C H
Sbjct: 538 HFGKGYCFH 546
>sp|HN_SENDA|HEMAGGLUTININ-NEURAMINIDASE virus (strain Hamamatsu) (SeV)
Query: 2 HFGRPCCHH 10
HFG+ C H
Sbjct: 538 HFGKGYCFH 546
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 CHFGRPCCHH 10
CH G C H+
Sbjct: 8 CHLGVYCVHN 17
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 2 HFGRPCCHH 10
HFG+ C H
Sbjct: 538 HFGKGYCFH 546
>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)
Query: 3 FGRPCC 8
FGRP C
Sbjct: 2591 FGRPVC 2596
>sp|RYK_AVIR3|TYROSINE-PROTEIN kinase transforming protein RYK|Avian retrovirus RPL30
Query: 4 GRPCCHH 10
PCC H
Sbjct: 365 AEPCCSH 371
>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)
Query: 3 FGRPCC 8
FGRP C
Sbjct: 2473 FGRPAC 2478
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 3 FGRPCC 8
FGRP C
Sbjct: 2591 FGRPVC 2596
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 3 FGRPCC 8
FGRP C
Sbjct: 2473 FGRPAC 2478
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 CHFGRPCCHH 10
C GR C H
Sbjct: 636 CFLGRAACVH 645
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 CHFGRPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 CHFGRPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 CHFGRPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 CHFGRPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HFGRPCCHH 10
H G PC ++
Sbjct: 39 HLGYPCVYY 47
>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HFGRPCCHH 10
H G PC ++
Sbjct: 39 HLGYPCVYY 47
>sp|E316_ADE03|EARLY E3 16 kDa glycoprotein|Human adenovirus B serotype 3
Query: 1 CHFGRPCCHH 10
C+ PCC +
Sbjct: 123 CYLYTPCCAY 132
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 PCCH 9
PCCH
Sbjct: 27 PCCH 30
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 PCCH 9
PCCH
Sbjct: 27 PCCH 30
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 PCCH 9
PCCH
Sbjct: 27 PCCH 30
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 3 FGRPCCHH 10
FG CHH
Sbjct: 136 FGTMWCHH 143
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 FGRPCCHH 10
FG CHH
Sbjct: 136 FGTMWCHH 143
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FGRPCCHH 10
FG CHH
Sbjct: 136 FGTMWCHH 143
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FGRPCCHH 10
FG CHH
Sbjct: 136 FGTMWCHH 143
>sp|IKBG1_MDBVW|I-KAPPA-B like protein G1|Microplitis demolitor bracovirus (isolate Webb)
Query: 2 HFGRPCCH 9
H GR C H
Sbjct: 55 HEGRQCTH 62
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 3 FGRPCCHH 10
FG C HH
Sbjct: 493 FGHLCKHH 500
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 FGRPCCHH 10
FG C HH
Sbjct: 493 FGHLCKHH 500
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 4 GRPCC 8
G PCC
Sbjct: 528 GNPCC 532
>sp|P69_TYMVA|69 kDa protein|Turnip yellow mosaic virus (isolate
Query: 3 FGRPCCH 9
GRPC H
Sbjct: 9 IGRPCTH 15
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 4 GRPCC 8
G PCC
Sbjct: 532 GNPCC 536
>sp|P69_TYMVC|69 kDa protein|Turnip yellow mosaic virus (isolate
Query: 4 GRPCCH 9
GRPC H
Sbjct: 10 GRPCTH 15
>sp|P69_TYMV|69 kDa protein|Turnip yellow mosaic virus
Query: 4 GRPCCH 9
GRPC H
Sbjct: 10 GRPCTH 15
>sp|GP_PHV|ENVELOPMENT polyprotein|Prospect Hill virus (PHV)
Query: 1 CHFGRP 6
CHFG P
Sbjct: 873 CHFGDP 878
21|SequenceR|110|101|RGDASCHFGR
>sp|DPO21_BPK64|DEPOLYMERASE, capsule KN5-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)
Query: 6 CHFGR 10
CHFGR
Sbjct: 957 CHFGR 961
>sp|HELI_ICHVA|PROBABLE ATP-dependent helicase 25|Ictalurid herpesvirus 1 (strain Auburn)
Query: 2 GDASCHFG 9
G ASC FG
Sbjct: 324 GSASCRFG 331
>sp|FIBER_BPSFV|TAIL spike protein|Shigella phage Sf6 (Shigella flexneri
Query: 4 ASCHFGR 10
+SCHF R
Sbjct: 333 SSCHFSR 339
>sp|VMT8_MYXVL|KELCH repeat protein M-T8|Myxoma virus (strain Lausanne) (MYXV)
Query: 3 DASCHFG 9
D SCHF
Sbjct: 497 DVSCHFA 503
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 4 ASCHFG 9
ASCHFG
Sbjct: 584 ASCHFG 589
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 4 ASCHFG 9
ASCHFG
Sbjct: 584 ASCHFG 589
>sp|PCNA_NPVAC|PROBABLE DNA polymerase sliding clamp|Autographa californica nuclear
Query: 2 GDASCHFGR 10
GD CHF +
Sbjct: 202 GDYLCHFAK 210
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 RGDASCH 7
RGD CH
Sbjct: 2021 RGDGICH 2027
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 1 RGDASC 6
RGDA+C
Sbjct: 316 RGDANC 321
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 RGDASCHFGR 10
R DA+C+F R
Sbjct: 643 RLDAACNFTR 652
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 1 RGDASC 6
RGDA+C
Sbjct: 313 RGDANC 318
>sp|VE7_BPV1|PROTEIN E7|Bovine papillomavirus type 1
Query: 5 SCHFGR 10
CHFGR
Sbjct: 44 PCHFGR 49
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 GDASCH 7
GD++CH
Sbjct: 390 GDSNCH 395
>sp|VE7_BPV2|PROTEIN E7|Bos taurus papillomavirus 2 (Bovine
Query: 5 SCHFGR 10
CHFGR
Sbjct: 44 PCHFGR 49
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 4 ASCHFG 9
++CHFG
Sbjct: 863 STCHFG 868
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 4 ASCHFG 9
++CHFG
Sbjct: 864 STCHFG 869
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 4 ASCHFG 9
++CHFG
Sbjct: 863 STCHFG 868
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 4 ASCHFG 9
++CHFG
Sbjct: 863 STCHFG 868
22|SequenceR|115|106|RQFCSRGDAS
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 FCSRGDAS 10
FC+RGD S
Sbjct: 196 FCARGDHS 203
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FCSRGDAS 10
FC+RGD S
Sbjct: 196 FCARGDHS 203
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FCSRGDAS 10
FC+RGD S
Sbjct: 196 FCARGDHS 203
>sp|VBET_BPP4|PROTEIN beta|Enterobacteria phage P4 (Bacteriophage P4)
Query: 2 QFCSRGD 8
+FCSR D
Sbjct: 96 EFCSRND 102
23|SequenceR|120|111|SNNGSRQFCS
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 NNGSRQFCS 10
NNG +FCS
Sbjct: 5171 NNGPHEFCS 5179
>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)
Query: 2 NNGSRQFCS 10
NNG +FCS
Sbjct: 5171 NNGPHEFCS 5179
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 2 NNGSRQFCS 10
NNG +FCS
Sbjct: 5171 NNGPHEFCS 5179
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 2 NNGSRQFCS 10
NNG +FCS
Sbjct: 5171 NNGPHEFCS 5179
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 2 NNGSRQFCS 10
NNG +FCS
Sbjct: 5171 NNGPHEFCS 5179
>sp|Y098_NPVOP|UNCHARACTERIZED 36.0 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 3 NGSRQFC 9
NGS QFC
Sbjct: 47 NGSAQFC 53
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 2 NNGSRQFC 9
NNG+ +FC
Sbjct: 3149 NNGTVEFC 3156
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 2 NNGSRQFC 9
NNG+ +FC
Sbjct: 3149 NNGTVEFC 3156
Query: 2 NNGSRQFCS 10
N G +FCS
Sbjct: 4901 NKGPHEFCS 4909
>sp|RDRP_ORSVC|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Korean
Query: 3 NGSRQFCS 10
NGS FCS
Sbjct: 1582 NGSFAFCS 1589
>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore
Query: 3 NGSRQFCS 10
NGS FCS
Sbjct: 1582 NGSFAFCS 1589
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 NGSRQFCS 10
NG +FCS
Sbjct: 5210 NGPHEFCS 5217
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 NGSRQFCS 10
NG +FCS
Sbjct: 5230 NGPHEFCS 5237
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 NGSRQFCS 10
NG +FCS
Sbjct: 5260 NGPHEFCS 5267
>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 2 NNGSRQFCS 10
N G +FCS
Sbjct: 4912 NKGPHEFCS 4920
24|SequenceR|125|116|QIAGVSNNGS
>sp|NS3_BC512|NON-STRUCTURAL protein 3|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 1 QIAGVSNNG 9
Q+ GV+N+G
Sbjct: 202 QVVGVTNSG 210
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 QIAGVSNNG 9
+++GV+NNG
Sbjct: 526 ELSGVTNNG 534
25|SequenceR|130|121|QSDPCQIAGV
>sp|ICP46_FRG3G|IMMEDIATE-EARLY protein ICP-46|Frog virus 3 (isolate Goorha)
Query: 3 DPCQIAGV 10
DPC++AGV
Sbjct: 214 DPCRVAGV 221
>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)
Query: 1 QSDPCQIAGV 10
Q+DPC AGV
Sbjct: 567 QADPCCTAGV 576
>sp|ORF1_HAPV1|UNCHARACTERIZED protein 1|Halorubrum pleomorphic virus 1 (HRPV-1)
Query: 3 DPCQIAG 9
+PC+IAG
Sbjct: 22 NPCEIAG 28
>sp|FIB12_BPB03|PRE-NECK appendage protein|Bacillus phage B103 (Bacteriophage B103)
Query: 5 CQIAGV 10
CQ+AGV
Sbjct: 535 CQVAGV 540
>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1
Query: 3 DPCQIAGV 10
DPC +A +
Sbjct: 1217 DPCMVAAI 1224
26|SequenceR|135|126|DPCEFQSDPC
>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)
Query: 2 PCEFQSDPC 10
PCE D C
Sbjct: 1323 PCEINKDDC 1331
>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate
Query: 1 DPCEFQSDP 9
DP EF++ P
Sbjct: 918 DPAEFENTP 926
>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 DPCEFQSDPC 10
D CE SD C
Sbjct: 1994 DTCEVPSDLC 2003
>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 DPCEFQSDPC 10
D CE SD C
Sbjct: 1964 DTCEVPSDLC 1973
27|SequenceR|140|131|CCTSFDPCEF
>sp|YR135_MIMIV|PUTATIVE GMC-type oxidoreductase R135|Acanthamoeba polyphaga mimivirus
Query: 1 CCTSFDPCE 9
CC ++PCE
Sbjct: 6 CCKCYNPCE 14
>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain
Query: 5 FDPCEF 10
FDPCE+
Sbjct: 2018 FDPCEY 2023
>sp|FIBER_BPSFV|TAIL spike protein|Shigella phage Sf6 (Shigella flexneri
Query: 2 CTSFDPCEF 10
C SFD C F
Sbjct: 500 CVSFDKCIF 508
>sp|VP1_AQRVC|OUTER capsid protein VP1|Aquareovirus C (isolate Golden
Query: 3 TSFDPCEF 10
TSFDP F
Sbjct: 293 TSFDPSTF 300
>sp|MCP_SHV21|MAJOR capsid protein|Saimiriine herpesvirus 2 (strain 11)
Query: 2 CTSFDPCEF 10
CTSF C F
Sbjct: 875 CTSFLTCPF 883
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 2 CTSFDPCEF 10
CTSF C F
Sbjct: 879 CTSFLTCPF 887
>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)
Query: 2 CTSFDPCEF 10
CT FD C F
Sbjct: 632 CTVFDLCSF 640
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 4 SFDPCEF 10
SFDP EF
Sbjct: 842 SFDPAEF 848
>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)
Query: 3 TSFDPCE 9
+SF PCE
Sbjct: 988 SSFGPCE 994
>sp|BET_SFVCP|PROTEIN Bet|Simian foamy virus (isolate chimpanzee)
Query: 1 CCTSFDP 7
CC + DP
Sbjct: 208 CCQALDP 214
>sp|YR345_MIMIV|UNCHARACTERIZED protein R345|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CCTSFDPCEF 10
C F+PCEF
Sbjct: 914 CNRPFNPCEF 923
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 CCTSFDPCEF 10
CCT P E+
Sbjct: 1376 CCTRHVPSEY 1385
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 CCTSFDPCEF 10
CCT P E+
Sbjct: 1376 CCTRHVPSEY 1385
>sp|FUS_AMPV1|FUSION glycoprotein F0|Avian metapneumovirus (isolate Canada
Query: 3 TSFDPCEF 10
++FDP EF
Sbjct: 444 SNFDPIEF 451
>sp|DPO21_BPK64|DEPOLYMERASE, capsule KN5-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)
Query: 4 SFDPCEF 10
SFD C+F
Sbjct: 1003 SFDNCQF 1009
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 CCTSFDPCEF 10
CCT P E+
Sbjct: 1376 CCTRHVPSEY 1385
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 CCTSFDPCEF 10
CCT P E+
Sbjct: 1376 CCTRHVPSEY 1385
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 CCTSFDPCEF 10
CCT P E+
Sbjct: 1376 CCTRHVPSEY 1385
>sp|YR578_MIMIV|PUTATIVE ankyrin repeat protein R578|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CCTSFDPCEF 10
CC +FD ++
Sbjct: 367 CCNNFDITKY 376
>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)
Query: 3 TSFDPCEF 10
+ FDPC F
Sbjct: 2480 SKFDPCTF 2487
>sp|RDRP_PCV87|REPLICASE large subunit|Peanut clump virus (isolate 87/TGTA2)
Query: 1 CCTSFDPCEF 10
CC F C +
Sbjct: 205 CCDVFQDCAY 214
28|SequenceR|145|136|GDVMVCCTSF
>sp|TIPK_LAMBD|TAIL tip assembly protein K|Escherichia phage lambda (Bacteriophage
Query: 1 GDVMVCC 7
GDV++CC
Sbjct: 125 GDVLLCC 131
>sp|YL788_MIMIV|PUTATIVE BTB/POZ domain-containing protein L788|Acanthamoeba polyphaga
Query: 1 GDVMVCCTSF 10
GD+ VCC +
Sbjct: 308 GDIYVCCYEY 317
>sp|P7_WTVNJ|PROTEIN P7|Wound tumor virus (strain NJ)
Query: 1 GDVMVCCTSF 10
GDVMV C S
Sbjct: 193 GDVMVKCDSL 202
>sp|P7_WTV|PROTEIN P7|Wound tumor virus (WTV)
Query: 1 GDVMVCCTSF 10
GDVMV C S
Sbjct: 193 GDVMVKCDSL 202
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1435 GDVVVCAT 1442
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1438 GDVVVCAT 1445
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1430 GDVVVCAT 1437
>sp|P4_RTBVP|PROTEIN P4|Rice tungro bacilliform virus (isolate
Query: 1 GDVMVCCTS 9
GD M C TS
Sbjct: 369 GDTMSCTTS 377
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1434 GDVVVCAT 1441
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1432 GDVVVCAT 1439
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1436 GDVVVCAT 1443
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1436 GDVVVCAT 1443
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1428 GDVVVCAT 1435
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1431 GDVVVCAT 1438
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GDVMVCCTSF 10
G V +CCT F
Sbjct: 70 GTVFLCCTGF 79
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GDVMVCCTSF 10
G V +CCT F
Sbjct: 70 GTVFLCCTGF 79
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1431 GDVVVCST 1438
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1434 GDVVVCAT 1441
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1435 GDVVVCAT 1442
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1431 GDVVVCST 1438
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GDVMVCCT 8
GDV++C T
Sbjct: 1435 GDVVICAT 1442
29|SequenceR|150|141|CCGWSGDVMV
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 1 CCGWSGDVM 9
C GWSG V+
Sbjct: 309 CAGWSGIVV 317
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 1 CCGWSGDVM 9
C GWSG V+
Sbjct: 309 CAGWSGIVV 317
>sp|MVP_TUMVQ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Quebec)
Query: 1 CCGWSGDVM 9
C GWSG V+
Sbjct: 309 CAGWSGIVV 317
>sp|MVP_TUMVJ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Japanese)
Query: 1 CCGWSGDVM 9
C GWSG V+
Sbjct: 309 CAGWSGIVV 317
>sp|DUT_ALHV1|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Alcelaphine herpesvirus 1
Query: 2 CGWSGDVM 9
C W GDV+
Sbjct: 193 CKWKGDVL 200
>sp|DPOL1_BPKIM|DEPOLYMERASE 1, capsule K47-specific|Klebsiella phage vB_KpnP_IME205
Query: 4 WSGDVMV 10
WSGD MV
Sbjct: 337 WSGDYMV 343
>sp|DEPOL_BPK15|DEPOLYMERASE, capsule K47-specific|Klebsiella phage SH-KP152226 (Bacteriophage
Query: 4 WSGDVMV 10
WSGD MV
Sbjct: 337 WSGDYMV 343
>sp|GLYCO_IHNVR|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 1 CCGWSG 6
CC WSG
Sbjct: 483 CCCWSG 488
>sp|GLYCO_IHNVO|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 1 CCGWSG 6
CC WSG
Sbjct: 483 CCCWSG 488
>sp|GLYCO_IHNVW|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 1 CCGWSG 6
CC WSG
Sbjct: 483 CCCWSG 488
>sp|TUBE2_BPT7|TAIL tubular protein gp12|Escherichia phage T7 (Bacteriophage T7)
Query: 2 CGWSGDVM 9
CGW G+ +
Sbjct: 781 CGWEGNYL 788
>sp|POLG_BSTV1|GENOME polyprotein|Brome streak virus (strain 11-Cal)
Query: 2 CGWSGDV 8
C W GDV
Sbjct: 651 CHWEGDV 657
>sp|US03_GAHVM|PROTEIN kinase US3 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 CCGWSG 6
C GWSG
Sbjct: 252 CYGWSG 257
>sp|US03_GAHVG|SERINE/THREONINE-PROTEIN kinase US3 homolog|Gallid herpesvirus 2 (strain GA)
Query: 1 CCGWSG 6
C GWSG
Sbjct: 252 CYGWSG 257
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 4 WSGDVMV 10
WSGD +V
Sbjct: 2053 WSGDTLV 2059
>sp|RPB2_IIV6|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 6
Query: 2 CGWSG 6
CGW+G
Sbjct: 1046 CGWNG 1050
>sp|Y071_OSHVF|UNCHARACTERIZED protein ORF71|Ostreid herpesvirus 1 (isolate France)
Query: 3 GWSGDV 8
GWSG+V
Sbjct: 174 GWSGNV 179
>sp|Y04P_BPT4|UNCHARACTERIZED 39.0 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)
Query: 2 CGWSGDVMV 10
CGW G +V
Sbjct: 224 CGWEGYKLV 232
>sp|L_ALLVP|RNA-DIRECTED RNA polymerase L|Allpahuayo mammarenavirus (isolate
Query: 4 WSGDVMV 10
WS D+MV
Sbjct: 933 WSKDIMV 939
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 CGWSGDVM 9
CGW+G +M
Sbjct: 91 CGWAGWLM 98
>sp|YR328_MIMIV|UNCHARACTERIZED protein R328|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CCGWSG 6
CC W+G
Sbjct: 235 CCIWNG 240
>sp|R1AB_CVTMI|REPLICASE polyprotein 1ab|Turkey coronavirus (strain Minnesota) (TCoV)
Query: 1 CCGWS 5
CC WS
Sbjct: 139 CCTWS 143
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 1 CCGWS 5
CC WS
Sbjct: 4581 CCSWS 4585
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 1 CCGWS 5
CC WS
Sbjct: 4581 CCSWS 4585
>sp|Y013_NPVAC|UNCHARACTERIZED 38.7 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 2 CGWSGD 7
C W GD
Sbjct: 90 CNWDGD 95
>sp|POLG_AEVL2|GENOME polyprotein|Avian encephalomyelitis virus (strain L2Z)
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 349 CFWRGDIV 356
>sp|POLG_AEVVR|GENOME polyprotein|Avian encephalomyelitis virus (strain Van
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 349 CFWRGDIV 356
>sp|POLG_AEVCA|GENOME polyprotein|Avian encephalomyelitis virus (strain Calnek
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 349 CFWRGDIV 356
>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)
Query: 3 GWSGDVMV 10
GWSG+ +V
Sbjct: 1238 GWSGERIV 1245
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CGWSG 6
CGW+G
Sbjct: 84 CGWNG 88
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CCGWSGDVMV 10
CC S DV++
Sbjct: 103 CCNISHDVVI 112
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CCGWSGDVMV 10
CC S DV++
Sbjct: 103 CCNISHDVVI 112
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|B19_VACCW|ANKYRIN repeat protein B19|Vaccinia virus (strain Western Reserve)
Query: 1 CCGWSGDVMV 10
CC S DV++
Sbjct: 103 CCNISHDVVI 112
>sp|SIGM2_REOVL|INNER capsid protein sigma-2|Reovirus type 1 (strain Lang)
Query: 4 WSGDV 8
WSGDV
Sbjct: 171 WSGDV 175
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|SIGM2_REOVD|INNER capsid protein sigma-2|Reovirus type 3 (strain Dearing)
Query: 4 WSGDV 8
WSGDV
Sbjct: 171 WSGDV 175
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 1 CCGWSGDV 8
CC WS V
Sbjct: 4583 CCTWSERV 4590
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|SIGM2_REOVJ|INNER capsid protein sigma-2|Reovirus type 2 (strain D5/Jones)
Query: 4 WSGDV 8
WSGDV
Sbjct: 171 WSGDV 175
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
30|SequenceR|155|146|AQPMPCCGWS
>sp|NS1AB_OASV1|NON-STRUCTURAL polyprotein 1AB|Ovine astrovirus 1 (OAstV-1)
Query: 4 MPCCGWS 10
MP CGWS
Sbjct: 1060 MPQCGWS 1066
>sp|NS1AB_MASV1|NON-STRUCTURAL polyprotein 1AB|Mink astrovirus 1 (MAstV-1)
Query: 1 AQPMPCCGWS 10
A MP CGW+
Sbjct: 1094 ATRMPQCGWT 1103
>sp|POL_FFV|PRO-POL polyprotein|Feline foamy virus (FFV) (Feline
Query: 2 QPMPCCGWS 10
QP C GWS
Sbjct: 1059 QPPTCSGWS 1067
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 4 MPCCGW 9
M CCGW
Sbjct: 12 MGCCGW 17
>sp|GL_EHV2|ENVELOPE glycoprotein L|Equine herpesvirus 2 (strain 86/87)
Query: 3 PMPCC 7
PMPCC
Sbjct: 27 PMPCC 31
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 6 CCGW 9
CCGW
Sbjct: 2221 CCGW 2224
>sp|Y149_NPVAC|UNCHARACTERIZED 12.4 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 3 PMPCC 7
P+PCC
Sbjct: 92 PLPCC 96
>sp|GLYCO_TIBVC|GLYCOPROTEIN virus (strain CS132) (TIBV)
Query: 3 PMPCCGWS 10
P P C WS
Sbjct: 133 PAPSCYWS 140
>sp|DPOL_FRG3G|PUTATIVE DNA polymerase 060R|Frog virus 3 (isolate Goorha)
Query: 4 MPCCGW 9
+P CGW
Sbjct: 121 LPTCGW 126
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3250 ARVSPGCGWS 3259
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3250 ARVSPGCGWS 3259
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3250 ARVSPGCGWS 3259
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3251 ARVSPGCGWS 3260
>sp|PRIM_BPP4|PUTATIVE P4-specific DNA primase|Enterobacteria phage P4 (Bacteriophage
Query: 2 QPMPCCGWS 10
QP P CG S
Sbjct: 33 QPCPVCGGS 41
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3250 ARVSPGCGWS 3259
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3252 ARVSPGCGWS 3261
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3252 ARVSPGCGWS 3261
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3250 ARISPGCGWS 3259
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3250 ARISPGCGWS 3259
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 6 CCGWS 10
CC WS
Sbjct: 4581 CCSWS 4585
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 6 CCGWS 10
CC WS
Sbjct: 4581 CCSWS 4585
>sp|Y409_ATV|TNPB-LIKE protein ORF409|Acidianus two-tailed virus (ATV)
Query: 5 PCCGWS 10
P CGW+
Sbjct: 353 PKCGWT 358
>sp|DPOL_TNAVC|DNA polymerase|Trichoplusia ni ascovirus 2c (TnAV-2c)
Query: 4 MPCCGW 9
+P CGW
Sbjct: 184 IPPCGW 189
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 5 PCCG 8
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 5 PCCG 8
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 PCCG 8
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 PCCG 8
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 PCCG 8
PCCG
Sbjct: 208 PCCG 211
>sp|R1AB_CVTMI|REPLICASE polyprotein 1ab|Turkey coronavirus (strain Minnesota) (TCoV)
Query: 6 CCGWS 10
CC WS
Sbjct: 139 CCTWS 143
>sp|ENV_EIAVW|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 4 MPCCGW 9
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|GPB_BPPM2|UNCHARACTERIZED protein Gp-b*|Pseudoalteromonas phage PM2 (Bacteriophage PM2)
Query: 3 PMPCC 7
P PCC
Sbjct: 18 PFPCC 22
>sp|ENV_EIAVC|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 4 MPCCGW 9
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV9|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 4 MPCCGW 9
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV2|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 4 MPCCGW 9
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV1|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 4 MPCCGW 9
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAVY|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 4 MPCCGW 9
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV3|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 4 MPCCGW 9
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)
Query: 1 AQPMPCCGW 9
++P+P C W
Sbjct: 1542 SKPVPFCLW 1550
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 PCCGW 9
PC GW
Sbjct: 13 PCYGW 17
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 5 PCCGW 9
PC GW
Sbjct: 13 PCYGW 17
>sp|ENV_EIAV5|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 4 MPCCGW 9
+PCCG+
Sbjct: 790 IPCCGF 795
>sp|Y124_OSHVF|UNCHARACTERIZED protein ORF124|Ostreid herpesvirus 1 (isolate France)
Query: 5 PCCG 8
PCCG
Sbjct: 163 PCCG 166
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 QPMPCCG 8
+ +PCCG
Sbjct: 4684 KTVPCCG 4690
>sp|GLYCO_TUPVT|GLYCOPROTEIN virus (isolate Tupaia/Thailand/-/1986) (TUPV)
Query: 3 PMPCCGWS 10
P P C WS
Sbjct: 128 PNPQCAWS 135
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 6 CCGWS 10
CC WS
Sbjct: 4583 CCTWS 4587
>sp|VP03_ALHV1|PROBABLE tegument protein antigen 3|Alcelaphine herpesvirus 1 (strain C500)
Query: 5 PCCGW 9
P CGW
Sbjct: 305 PMCGW 309
>sp|POL2_TOTV|RNA2 polyprotein|Tomato torrado virus (isolate Solanum
Query: 4 MPCCGWS 10
+PC WS
Sbjct: 1003 LPCAPWS 1009
31|SequenceR|160|151|DECCSAQPMP
>sp|VPHE_NPVLD|POLYHEDRAL envelope protein|Lymantria dispar multicapsid nuclear polyhedrosis
Query: 1 DECCSAQPMP 10
D CC+ P P
Sbjct: 108 DACCAQPPAP 117
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 DECCSAQPMP 10
D CS PMP
Sbjct: 1713 DSDCSIPPMP 1722
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 DECCSAQPMP 10
D CS PMP
Sbjct: 1714 DSDCSIPPMP 1723
>sp|VE6_HPV22|PROTEIN E6|Human papillomavirus 22
Query: 1 DECCSAQPM 9
D CCS QP
Sbjct: 139 DICCSNQPF 147
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 ECCSAQPMP 10
+CC+ +P P
Sbjct: 2671 QCCNLEPEP 2679
32|SequenceR|165|156|CCHVRDECCS
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 HVRDECC 9
HVRD CC
Sbjct: 1423 HVRDNCC 1429
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 3 HVRDECC 9
H+ DECC
Sbjct: 1366 HIEDECC 1372
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 HVRDECC 9
HV+D CC
Sbjct: 1423 HVKDNCC 1429
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 CHVRDEC 8
CH+R EC
Sbjct: 2972 CHLRGEC 2978
>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)
Query: 1 CCHVRDECCS 10
CC V D C S
Sbjct: 1951 CCRVSDWCSS 1960
>sp|YR592_MIMIV|PUTATIVE helicase R592|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 VRDECC 9
++DECC
Sbjct: 446 IKDECC 451
>sp|L_MPV15|RNA-DIRECTED RNA polymerase L|Murine pneumonia virus (strain 15)
Query: 4 VRDECC 9
VRD CC
Sbjct: 390 VRDNCC 395
>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United States/W
Query: 2 CHVRDEC 8
CH+R+ C
Sbjct: 1811 CHIRESC 1817
>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)
Query: 1 CCHVRDE 7
C H+RDE
Sbjct: 1528 CKHIRDE 1534
>sp|RPO2_MIMIV|DNA-DIRECTED RNA polymerase subunit 2|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 CHVRDEC 8
CHV D C
Sbjct: 1130 CHVCDSC 1136
>sp|1A_OLV2I|REPLICATION protein 1a|Olive latent virus 2 (isolate
Query: 2 CHVRDECCS 10
CH R E CS
Sbjct: 160 CHHRAEDCS 168
>sp|NS1A_ANV1|NON-STRUCTURAL polyprotein 1A|Avian nephritis virus 1 (ANV-1)
Query: 1 CCHVRDECC 9
CC + +CC
Sbjct: 328 CCALVAKCC 336
>sp|NS1AB_ANV1|NON-STRUCTURAL polyprotein 1AB|Avian nephritis virus 1 (ANV-1)
Query: 1 CCHVRDECC 9
CC + +CC
Sbjct: 328 CCALVAKCC 336
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 5 RDECC 9
RD+CC
Sbjct: 211 RDDCC 215
>sp|5055R_ASFP4|PROTEIN MGF 505-5R|African swine fever virus (isolate
Query: 2 CHVRDECCS 10
CH DE C+
Sbjct: 123 CHELDESCN 131
>sp|5055R_ASFK5|PROTEIN MGF 505-5R|African swine fever virus (isolate
Query: 2 CHVRDECCS 10
CH DE C+
Sbjct: 123 CHDLDESCN 131
>sp|YL264_MIMIV|UNCHARACTERIZED WD repeat-containing protein L264|Acanthamoeba polyphaga mimivirus
Query: 1 CCHVRDECCS 10
CC ++ CC+
Sbjct: 421 CCANKNSCCT 430
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 CCHVRDE 7
CC+ +DE
Sbjct: 166 CCYKKDE 172
>sp|5055R_ASFM2|PROTEIN MGF 505-5R|African swine fever virus (isolate
Query: 2 CHVRDECCS 10
CH DE C+
Sbjct: 123 CHDLDESCN 131
>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 CHVRDECC 9
C V ++CC
Sbjct: 614 CQVIEDCC 621
>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 CHVRDECC 9
C V ++CC
Sbjct: 614 CQVIEDCC 621
>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 CHVRDECC 9
C V ++CC
Sbjct: 614 CQVIEDCC 621
>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)
Query: 3 HVRDECC 9
HV +CC
Sbjct: 1364 HVETDCC 1370
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 HVRDECC 9
HV +CC
Sbjct: 1364 HVETDCC 1370
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 HVRDECC 9
HV +CC
Sbjct: 1364 HVETDCC 1370
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 HVRDECC 9
HV +CC
Sbjct: 1364 HVETDCC 1370
>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)
Query: 3 HVRDECC 9
HV +CC
Sbjct: 1364 HVETDCC 1370
>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 CHVRDECC 9
C V ++CC
Sbjct: 614 CQVIEDCC 621
>sp|YR327_MIMIV|UNCHARACTERIZED protein R327|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CCHVRDECCS 10
CC ++D+ S
Sbjct: 611 CCFIKDQLYS 620
33|SequenceR|170|161|FAGHPCCHVR
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GHPCCHV 9
+PCCHV
Sbjct: 25 AYPCCHV 31
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GHPCCHV 9
+PCCHV
Sbjct: 25 AYPCCHV 31
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GHPCCHV 9
+PCCHV
Sbjct: 25 AYPCCHV 31
>sp|VP2_BTV3V|OUTER capsid protein VP2|Bluetongue virus 3 (isolate South
Query: 2 AGHPCCHVR 10
A CCHVR
Sbjct: 158 AERKCCHVR 166
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FAGHPCCHVR 10
FAGH C VR
Sbjct: 558 FAGHLKCKVR 567
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FAGHPCCHVR 10
FAGH C VR
Sbjct: 558 FAGHLKCKVR 567
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FAGHPCCHVR 10
FAGH C VR
Sbjct: 558 FAGHLKCKVR 567
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FAGHPCCHVR 10
FAGH C VR
Sbjct: 558 FAGHLKCKVR 567
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FAGHPCCHVR 10
FAGH C VR
Sbjct: 558 FAGHLKCKVR 567
>sp|PG153_VACCW|ENVELOP protein OPG153|Vaccinia virus (strain Western Reserve)
Query: 1 FAGHPCC 7
F GH CC
Sbjct: 436 FIGHYCC 442
>sp|R1A_GLRV3|REPLICASE protein 1a|Grapevine leafroll-associated virus 3 (isolate
Query: 2 AGHPCCHV 9
AGH CHV
Sbjct: 523 AGHVNCHV 530
>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate
Query: 2 AGHPCCHV 9
AGH CHV
Sbjct: 523 AGHVNCHV 530
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 3 GHPCC 7
G+PCC
Sbjct: 528 GNPCC 532
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 3 GHPCC 7
G+PCC
Sbjct: 532 GNPCC 536
>sp|CAPSD_BPS13|CAPSID protein F|Enterobacteria phage S13 (Bacteriophage S13)
Query: 3 GHPCCHVR 10
G CCH++
Sbjct: 160 GFRCCHLK 167
>sp|CAPSD_BPPHS|CAPSID protein F|Enterobacteria phage phiX174 (Isolate Sanger)
Query: 3 GHPCCHVR 10
G CCH++
Sbjct: 160 GFRCCHLK 167
>sp|CAPSD_BPPHK|CAPSID protein F|Enterobacteria phage phiK (Bacteriophage phi-K)
Query: 3 GHPCCHVR 10
G CCH++
Sbjct: 160 GFRCCHLK 167
>sp|A40_VACCC|PROTEIN A40|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FAGHPCC 7
+AG+ CC
Sbjct: 8 YAGYACC 14
>sp|GL_SHV21|ENVELOPE glycoprotein L|Saimiriine herpesvirus 2 (strain 11)
Query: 4 HPCCHV 9
+PCC+V
Sbjct: 23 NPCCNV 28
>sp|CAPSD_AQRVA|INNER capsid protein VP3|Aquareovirus A (isolate Chum
Query: 4 HPCCH 8
HP CH
Sbjct: 238 HPICH 242
>sp|MCAPS_PEMVW|MINOR capsid protein P3-RTD|Pea enation mosaic virus-1 (strain
Query: 3 GHPCCHV 9
GHP C V
Sbjct: 347 GHPDCEV 353
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 3 GHPCCHVR 10
GH CC R
Sbjct: 161 GHECCARR 168
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 3 GHPCCHVR 10
GH CC R
Sbjct: 161 GHECCARR 168
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 1 FAGHPCCHV 9
+ GH CHV
Sbjct: 268 YYGHSKCHV 276
>sp|A40_VACCW|PROTEIN A40|Vaccinia virus (strain Western Reserve)
Query: 1 FAGHPCC 7
+AG+ CC
Sbjct: 8 YAGYACC 14
>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)
Query: 1 FAGHPCCHV 9
F G CC V
Sbjct: 1946 FLGRMCCRV 1954
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FAGHPCCH 8
HP CH
Sbjct: 249 LTSHPICH 256
34|SequenceR|175|166|HVLDCFAGHP
>sp|L_PIRVV|RNA-DIRECTED RNA polymerase L|Pirital mammarenavirus (isolate
Query: 3 LDCFAGHP 10
L C++GHP
Sbjct: 1436 LVCYSGHP 1443
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 585 DCFRKHP 591
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 586 DCFRKHP 592
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 582 DCFRKHP 588
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 590 DCFRKHP 596
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 589 DCFRKHP 595
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 589 DCFRKHP 595
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 589 DCFRKHP 595
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 590 DCFRKHP 596
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 585 DCFRKHP 591
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 585 DCFRKHP 591
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRRHP 590
>sp|UL87_SHV21|GENE 24 protein|Saimiriine herpesvirus 2 (strain 11)
Query: 3 LDCFAGH 9
LDC GH
Sbjct: 52 LDCIMGH 58
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|VP1_MPRVN|UNCHARACTERIZED protein VP1|Micromonas pusilla reovirus (isolate Netherlands/2005)
Query: 1 HVLDCFA 7
HVL CF
Sbjct: 683 HVLSCFG 689
>sp|THY_BPT5|PROBABLE thymidylate synthase|Escherichia phage T5 (Enterobacteria phage
Query: 3 LDCFAGHP 10
+DCF G P
Sbjct: 179 VDCFLGLP 186
>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca
Query: 2 VLDCFAGH 9
++ CFA H
Sbjct: 3850 IISCFASH 3857
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 VLDCFAGH 9
V+DC A H
Sbjct: 286 VIDCMAKH 293
>sp|R1A_LIYV9|REPLICASE polyprotein 1a|Lettuce infectious yellows virus (isolate
Query: 1 HVLDCFAGHP 10
H+L C G P
Sbjct: 45 HLLRCILGSP 54
>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate
Query: 1 HVLDCFAGHP 10
H+L C G P
Sbjct: 45 HLLRCILGSP 54
>sp|TOP2_IIV3|DNA topoisomerase 2|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 HVLDC 5
HVLDC
Sbjct: 17 HVLDC 21
>sp|NEC1_ALHV1|NUCLEAR egress protein 1|Alcelaphine herpesvirus 1 (strain C500)
Query: 4 DCFAGH 9
DC+ GH
Sbjct: 224 DCYKGH 229
>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca
Query: 2 VLDCFAGH 9
++ CFA H
Sbjct: 3850 IISCFASH 3857
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 HVLDC 5
HVLDC
Sbjct: 4676 HVLDC 4680
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 HVLDC 5
HVLDC
Sbjct: 4656 HVLDC 4660
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 HVLDC 5
HVLDC
Sbjct: 4706 HVLDC 4710
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 1 HVLDCFAGH 9
H+LD F G+
Sbjct: 236 HILDLFYGN 244
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 1 HVLDCFAGH 9
H+LD F G+
Sbjct: 236 HILDLFYGN 244
35|SequenceR|180|171|TICRTHVLDC
>sp|L_AMPV1|RNA-DIRECTED RNA polymerase L|Avian metapneumovirus (isolate Canada
Query: 1 TICRTHVLDC 10
T+ R HVL C
Sbjct: 1793 TLWRKHVLSC 1802
>sp|V018_FOWPN|PUTATIVE ankyrin repeat protein FPV018|Fowlpox virus (strain NVSL) (FPV)
Query: 2 ICRTHVLD 9
+CR++VLD
Sbjct: 156 VCRSYVLD 163
>sp|VG71_SHV21|UNCHARACTERIZED gene 71 protein|Saimiriine herpesvirus 2 (strain 11)
Query: 2 ICRTHVLDC 10
+C HVL+C
Sbjct: 139 LCEMHVLEC 147
>sp|TOP2_IIV3|DNA topoisomerase 2|Invertebrate iridescent virus 3 (IIV-3)
Query: 6 HVLDC 10
HVLDC
Sbjct: 17 HVLDC 21
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 TICRTHVLDC 10
T+C HVLDC
Sbjct: 4653 TMC--HVLDC 4660
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 TICRTHVLDC 10
T+C HVLDC
Sbjct: 4673 TMC--HVLDC 4680
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 TICRTHVLDC 10
T+C HVLDC
Sbjct: 4703 TMC--HVLDC 4710
36|SequenceR|185|176|HTGTPTICRT
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 1 HTGTPTIC 8
HT PT+C
Sbjct: 2503 HTTIPTVC 2510
>sp|CAPSH_ASFWA|MAJOR capsid protein|African swine fever virus (isolate
Query: 1 HTGTPTI 7
HTGTPT+
Sbjct: 80 HTGTPTL 86
>sp|CAPSH_ASFK5|MAJOR capsid protein|African swine fever virus (isolate
Query: 1 HTGTPTI 7
HTGTPT+
Sbjct: 80 HTGTPTL 86
>sp|CAPSH_ASFB7|HEXON protein p72|African swine fever virus (strain
Query: 1 HTGTPTI 7
HTGTPT+
Sbjct: 80 HTGTPTL 86
>sp|CAPSH_ASFM2|HEXON protein p72|African swine fever virus (isolate
Query: 1 HTGTPTI 7
HTGTPT+
Sbjct: 80 HTGTPTL 86
>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus
Query: 1 HTGTPTI 7
H GTPT+
Sbjct: 2416 HVGTPTV 2422
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 1 HTGTPTIC 8
HT PT+C
Sbjct: 2503 HTTIPTVC 2510
>sp|HEMA_I76AK|HEMAGGLUTININ A virus (strain A/Duck/New
Query: 1 HTGTPTIC 8
+TG P IC
Sbjct: 19 YTGNPVIC 26
>sp|VRPO_LAMBD|REPLICATION protein O|Escherichia phage lambda (Bacteriophage lambda)
Query: 3 GTPTICR 9
G+PT CR
Sbjct: 316 GSPTTCR 322
>sp|HEMA_I56A1|HEMAGGLUTININ A virus (strain A/Duck/Czechoslovakia/1956
Query: 1 HTGTPTIC 8
+TG P IC
Sbjct: 19 YTGNPVIC 26
>sp|HEMA_I79A7|HEMAGGLUTININ A virus (strain A/Grey
Query: 1 HTGTPTIC 8
+TG P IC
Sbjct: 19 YTGNPVIC 26
>sp|HEMA_I77AG|HEMAGGLUTININ A virus (strain A/Budgerigar/Hokkaido/1/1977
Query: 1 HTGTPTIC 8
+TG P IC
Sbjct: 19 YTGNPVIC 26
>sp|HEMA_I76A1|HEMAGGLUTININ A virus (strain A/Duck/Alberta/28/1976
Query: 1 HTGTPTIC 8
+TG P IC
Sbjct: 19 YTGNPVIC 26
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 3 GTPTICR 9
G P++CR
Sbjct: 18 GVPSVCR 24
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 GTPTICR 9
G P++CR
Sbjct: 18 GVPSVCR 24
>sp|HEMA_I80A8|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/833/1980
Query: 1 HTGTPTIC 8
+TG P IC
Sbjct: 19 YTGNPVIC 26
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TGTPTICRT 10
+G P +CRT
Sbjct: 150 SGEPRLCRT 158
>sp|HEMA_I85A7|HEMAGGLUTININ A virus (strain A/Ruddy
Query: 1 HTGTPTIC 8
+TG P IC
Sbjct: 19 YTGNPVIC 26
>sp|HEMA_I82A3|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/133/1982
Query: 1 HTGTPTIC 8
+TG P IC
Sbjct: 19 YTGNPVIC 26
>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate
Query: 2 TGTPTIC 8
T TPT C
Sbjct: 2084 TATPTFC 2090
>sp|HEMA_I75A4|HEMAGGLUTININ A virus (strain A/Chicken/Alabama/1/1975
Query: 1 HTGTPTIC 8
+TG P IC
Sbjct: 19 YTGNPVIC 26
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HTGTPTIC 8
H G+P +C
Sbjct: 199 HAGSPALC 206
37|SequenceR|190|181|KKALPHTGTP
>sp|VG36_EHV2|PROBABLE inactive protein kinase 38|Equine herpesvirus 2 (strain 86/87)
Query: 3 ALPHTGTP 10
A PHTG P
Sbjct: 223 ATPHTGNP 230
>sp|CAPSH_ASFWA|MAJOR capsid protein|African swine fever virus (isolate
Query: 2 KALPHTGTP 10
K PHTGTP
Sbjct: 76 KVRPHTGTP 84
>sp|CAPSH_ASFM2|HEXON protein p72|African swine fever virus (isolate
Query: 2 KALPHTGTP 10
K PHTGTP
Sbjct: 76 KVRPHTGTP 84
>sp|CAPSH_ASFK5|MAJOR capsid protein|African swine fever virus (isolate
Query: 2 KALPHTGTP 10
K PHTGTP
Sbjct: 76 KVRPHTGTP 84
>sp|CAPSH_ASFB7|HEXON protein p72|African swine fever virus (strain
Query: 2 KALPHTGTP 10
K PHTGTP
Sbjct: 76 KVRPHTGTP 84
>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 1 KKALPHTGT 9
K PHTGT
Sbjct: 4137 KMLTPHTGT 4145
>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 KKALPHTGTP 10
KK PH TP
Sbjct: 493 KKFKPHKATP 502
>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 1 KKALPHTGT 9
K PHTGT
Sbjct: 4137 KMLTPHTGT 4145
38|SequenceR|195|186|RQAPLKKALP
>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)
Query: 1 RQAPLKKALP 10
R P KKALP
Sbjct: 138 RTQPAKKALP 147
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 1 RQAPLKKALP 10
R+APL+ A P
Sbjct: 141 REAPLRGAYP 150
39|SequenceR|200|191|VARNTRQAPL
***** No hits found ******
40|SequenceR|205|196|SSSLAVARNT
***** No hits found ******
41|SequenceR|210|201|DPCMVSSSLA
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 2 PCMVSSS 8
PCM+S+S
Sbjct: 556 PCMISNS 562
>sp|VP2_AHSV4|OUTER capsid protein VP2|African horse sickness virus 4
Query: 1 DPCMVSSSLA 10
D C +SSS+A
Sbjct: 732 DRCWISSSVA 741
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 2 PCMVSSSLA 10
PC+VSS+ A
Sbjct: 6669 PCIVSSNYA 6677
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 DPCMVSSSLA 10
D C+++SSLA
Sbjct: 26 DGCVITSSLA 35
42|SequenceR|215|206|CRSRADPCMV
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 1 CRSRADPCMV 10
CRSR DP V
Sbjct: 21 CRSRIDPGYV 30
>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1
Query: 4 RADPCMV 10
+ DPCMV
Sbjct: 1215 KLDPCMV 1221
>sp|GLYC_RSVT|PUTATIVE envelope glycoprotein|Rice stripe virus (isolate T)
Query: 1 CRSRADPC 8
C +RA PC
Sbjct: 45 CSARAPPC 52
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 CRSRADPC 8
C+ A+PC
Sbjct: 558 CKKGAEPC 565
>sp|KFMS_FSVMD|TYROSINE-PROTEIN kinase transforming protein fms|Feline sarcoma virus (strain
Query: 1 CRSRADPC 8
CRS D C
Sbjct: 466 CRSHTDRC 473
>sp|YR643_MIMIV|UNCHARACTERIZED protein R643|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 SRADPCMV 10
+RADPC V
Sbjct: 28 NRADPCGV 35
43|SequenceR|220|211|TSGDPCRSRA
>sp|VGPCR_HHV8P|VIRAL G-protein coupled receptor|Human herpesvirus 8 type P
Query: 2 SGDPCRSRA 10
SGD CR R+
Sbjct: 176 SGDACRHRS 184
>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate
Query: 2 SGDPCRS 8
+GDPC+S
Sbjct: 1482 AGDPCQS 1488
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 TSGDPCR 7
T+G PCR
Sbjct: 602 TTGAPCR 608
>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)
Query: 3 GDPCRS 8
GDPC+S
Sbjct: 1271 GDPCQS 1276
>sp|H7_VACCT|LATE protein H7|Vaccinia virus (strain Tian Tan)
Query: 2 SGDPCRSRA 10
SGD C++ A
Sbjct: 72 SGDECKTHA 80
>sp|PG112_VACCA|LATE protein OPG112|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SGDPCRSRA 10
SGD C++ A
Sbjct: 72 SGDECKTHA 80
>sp|PG112_VAR67|LATE protein OPG112|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 SGDPCRSRA 10
SGD C++ A
Sbjct: 72 SGDECKTHA 80
>sp|PG112_VACCC|LATE protein OPG112|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SGDPCRSRA 10
SGD C++ A
Sbjct: 72 SGDECKTHA 80
>sp|H7_VARV|LATE protein H7|Variola virus
Query: 2 SGDPCRSRA 10
SGD C++ A
Sbjct: 72 SGDECKTHA 80
>sp|PG112_VACCW|LATE protein OPG112|Vaccinia virus (strain Western Reserve)
Query: 2 SGDPCRSRA 10
SGD C++ A
Sbjct: 72 SGDECKTHA 80
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 SGDPCRSRA 10
SGDPC + A
Sbjct: 474 SGDPCYNGA 482
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 SGDPCRSRA 10
SGDPC + A
Sbjct: 474 SGDPCYNGA 482
>sp|Y035_OSHVF|UNCHARACTERIZED protein ORF35|Ostreid herpesvirus 1 (isolate France)
Query: 4 DPCRSR 9
+PCRSR
Sbjct: 45 NPCRSR 50
>sp|TRM1_EHV2|TRIPARTITE terminase subunit 1|Equine herpesvirus 2 (strain 86/87)
Query: 2 SGDPCRSR 9
SGDP RS
Sbjct: 87 SGDPSRSE 94
44|SequenceR|225|216|PLECCTSGDP
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 PLECCTSGDP 10
PLE C + DP
Sbjct: 1981 PLEDCFTKDP 1990
>sp|LEF9_NPVOP|LATE expression factor 9|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 2 LECCTSGDP 10
LEC GDP
Sbjct: 275 LECLLYGDP 283
>sp|VP07_BPAPS|PUTATIVE protein p7|Acyrthosiphon pisum secondary endosymbiont phage
Query: 3 ECCTSGD 9
E CTSGD
Sbjct: 85 ESCTSGD 91
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 3 ECCTSGD 9
ECC GD
Sbjct: 1781 ECCQCGD 1787
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 3 ECCTSGD 9
ECC GD
Sbjct: 1781 ECCQCGD 1787
>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 1 PLECCTSG 8
P CC+SG
Sbjct: 5085 PYVCCSSG 5092
>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)
Query: 4 CCTSGDP 10
CC G+P
Sbjct: 805 CCRDGEP 811
>sp|Y014_OSHVF|UNCHARACTERIZED protein ORF14|Ostreid herpesvirus 1 (isolate France)
Query: 4 CCTSGDP 10
CC SG P
Sbjct: 140 CCKSGQP 146
>sp|035L_FRG3G|UNCHARACTERIZED protein 035L|Frog virus 3 (isolate Goorha)
Query: 1 PLECCTSGDP 10
PL+ C GDP
Sbjct: 94 PLDLCRHGDP 103
>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)
Query: 3 ECCTSGDP 10
+CC G+P
Sbjct: 1198 KCCHHGEP 1205
>sp|HN_PI3B|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (BPIV-3)
Query: 5 CTSGDP 10
CTSG+P
Sbjct: 159 CTSGNP 164
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 LECCTSG 8
L CCT G
Sbjct: 263 LTCCTRG 269
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 LECCTSG 8
L CCT G
Sbjct: 272 LTCCTRG 278
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 LECCTSG 8
L CCT G
Sbjct: 272 LTCCTRG 278
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 LECCTSGDP 10
+E C GDP
Sbjct: 1146 IEKCQQGDP 1154
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 LECCTSGDP 10
+E C GDP
Sbjct: 1145 IEKCQQGDP 1153
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 1 PLECCTSGD 9
P+EC T D
Sbjct: 60 PIECNTDND 68
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 LECCTSGDP 10
+E C GDP
Sbjct: 1145 IEKCQQGDP 1153
>sp|VG70_ICHVA|UNCHARACTERIZED protein ORF70|Ictalurid herpesvirus 1 (strain Auburn)
Query: 2 LECCTSGDP 10
L+C GDP
Sbjct: 176 LQCAQHGDP 184
45|SequenceR|230|221|GYKGSPLECC
>sp|NSP1_ROTPY|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Pig/Mexico/YM/1983/G11P9[7])
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTPG|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Pig/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTBB|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cow/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTP5|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Pig/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTRF|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1])
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTB4|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Cow/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTW3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Cow/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTBU|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Cow/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTBA|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|CAPSD_FCVF9|CAPSID protein VP1|Feline calicivirus (strain F9) (FCV)
Query: 1 GYKGSPLECC 10
G+ +PL CC
Sbjct: 31 GFCSNPLMCC 40
>sp|CAPSD_FCVUR|CAPSID protein VP1|Feline calicivirus (strain Cat/United
Query: 1 GYKGSPLECC 10
G+ +PL CC
Sbjct: 31 GFCDNPLMCC 40
>sp|CAPSD_FCVF4|CAPSID protein VP1|Feline calicivirus (strain Japanese F4)
Query: 1 GYKGSPLECC 10
G+ +PL CC
Sbjct: 31 GFCDNPLMCC 40
>sp|CAPSD_FCVC6|CAPSID protein VP1|Feline calicivirus (strain CFI/68 FIV)
Query: 1 GYKGSPLECC 10
G+ +PL CC
Sbjct: 31 GFCDNPLMCC 40
>sp|VP2_BTV10|OUTER capsid protein VP2|Bluetongue virus 10 (isolate USA)
Query: 1 GYKGSPLE 8
GY+G P E
Sbjct: 224 GYRGQPYE 231
>sp|VP2_EHDV1|OUTER capsid protein VP2|Epizootic hemorrhagic disease virus 1
Query: 3 KGSPLECC 10
+G PL CC
Sbjct: 794 RGLPLLCC 801
>sp|FIBER_BPAPS|PUTATIVE tail fiber protein gp36|Acyrthosiphon pisum secondary endosymbiont
Query: 1 GYKGSPL 7
GYK SPL
Sbjct: 323 GYKDSPL 329
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 2 YKGSPLECC 10
YKG +E C
Sbjct: 889 YKGGSIESC 897
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GYKGSPLEC 9
G G PLEC
Sbjct: 192 GPDGYPLEC 200
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GYKGSPLEC 9
G G PLEC
Sbjct: 192 GPDGYPLEC 200
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)
Query: 1 GYKGSPLEC 9
G G PLEC
Sbjct: 192 GPDGYPLEC 200
Query: 2 YKGSPLE 8
YKG PLE
Sbjct: 958 YKGLPLE 964
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 GYKGSPLEC 9
G G PLEC
Sbjct: 192 GPDGYPLEC 200
Query: 2 YKGSPLE 8
YKG PLE
Sbjct: 958 YKGLPLE 964
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 GYKGSPLEC 9
G G PLEC
Sbjct: 192 GPDGYPLEC 200
Query: 2 YKGSPLE 8
YKG PLE
Sbjct: 954 YKGLPLE 960
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 1 GYKGSPLEC 9
G G PLEC
Sbjct: 192 GPDGYPLEC 200
Query: 2 YKGSPLE 8
YKG PLE
Sbjct: 958 YKGLPLE 964
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 GYKGSPLEC 9
G G PLEC
Sbjct: 192 GPDGYPLEC 200
Query: 2 YKGSPLE 8
YKG PLE
Sbjct: 958 YKGLPLE 964
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 GYKGSPLEC 9
G G PLEC
Sbjct: 192 GPDGYPLEC 200
Query: 2 YKGSPLE 8
YKG PLE
Sbjct: 954 YKGLPLE 960
>sp|NSP1_ROTAP|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cow/South/Africa/Offal
Query: 2 YKGSPLECC 10
+KG L+CC
Sbjct: 38 FKGWCLDCC 46
46|SequenceR|235|226|PMPCCGYKGS
>sp|Y059_OSHVF|UNCHARACTERIZED protein ORF59|Ostreid herpesvirus 1 (isolate France)
Query: 5 CGYKGS 10
CGYKGS
Sbjct: 146 CGYKGS 151
>sp|Y149_NPVAC|UNCHARACTERIZED 12.4 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 1 PMPCCGYKGS 10
P+PCC GS
Sbjct: 92 PLPCCIDDGS 101
>sp|YR326_MIMIV|UNCHARACTERIZED protein R326|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 CCGYKGS 10
CCG+K S
Sbjct: 372 CCGFKNS 378
>sp|ENV_EIAVW|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 2 MPCCGY 7
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAVC|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 MPCCGY 7
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV9|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 MPCCGY 7
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV3|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 MPCCGY 7
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV2|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 MPCCGY 7
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV1|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 MPCCGY 7
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAVY|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 2 MPCCGY 7
+PCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV5|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 MPCCGY 7
+PCCG+
Sbjct: 790 IPCCGF 795
>sp|GL_EHV2|ENVELOPE glycoprotein L|Equine herpesvirus 2 (strain 86/87)
Query: 1 PMPCC 5
PMPCC
Sbjct: 27 PMPCC 31
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 4 CCGYKG 9
CC YKG
Sbjct: 1652 CCKYKG 1657
Query: 4 CCGYK 8
CCG+K
Sbjct: 2221 CCGWK 2225
>sp|172L_IIV6|PUTATIVE helicase 172L|Invertebrate iridescent virus 6 (IIV-6)
Query: 5 CGYKG 9
CGYKG
Sbjct: 261 CGYKG 265
>sp|ENV_NPVLD|ENVELOPE fusion protein|Lymantria dispar multicapsid nuclear polyhedrosis
Query: 1 PMPCCGYKG 9
P+P CG G
Sbjct: 328 PIPLCGGDG 336
>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 4 CCGYKG 9
CCG+KG
Sbjct: 528 CCGHKG 533
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 1 PMPCCGY 7
P+P C Y
Sbjct: 5434 PLPLCAY 5440
>sp|IE0_NPVLD|IMMEDIATE-EARLY protein IE-0|Lymantria dispar multicapsid nuclear polyhedrosis
Query: 1 PMPCCGYK 8
P CCGY+
Sbjct: 206 PNVCCGYR 213
>sp|RDRP_BANNV|RNA-DIRECTED RNA polymerase VP1|Banna virus (BAV)
Query: 5 CGYKGS 10
CGY GS
Sbjct: 408 CGYTGS 413
>sp|DPOL_BPPZA|DNA polymerase|Bacillus phage PZA (Bacteriophage PZA)
Query: 4 CCGYKG 9
C GYKG
Sbjct: 103 CLGYKG 108
>sp|DPOL_BPPH2|DNA polymerase|Bacillus phage phi29 (Bacteriophage phi-29)
Query: 4 CCGYKG 9
C GYKG
Sbjct: 106 CLGYKG 111
>sp|RP147_FOWPN|DNA-DIRECTED RNA polymerase 147 kDa|Fowlpox virus (strain NVSL) (FPV)
Query: 2 MPCCGYK 8
M C GYK
Sbjct: 665 MSCAGYK 671
>sp|YL594_MIMIV|UNCHARACTERIZED protein L594|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 CCGY 7
CCGY
Sbjct: 336 CCGY 339
>sp|VPB_ARV|PROTEIN beta|Adelaide River virus (ARV)
Query: 2 MPCCGYKG 9
+P C YKG
Sbjct: 52 VPLCMYKG 59
>sp|VF075_IIV3|UNCHARACTERIZED protein 088R|Invertebrate iridescent virus 3 (IIV-3)
Query: 4 CCGYKG 9
CC Y+G
Sbjct: 245 CCEYRG 250
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 1 PMPCCGY 7
P+P C Y
Sbjct: 5310 PLPLCAY 5316
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 MPCCG 6
+PCCG
Sbjct: 4686 VPCCG 4690
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 4 CCGYK 8
CCG+K
Sbjct: 265 CCGFK 269
>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)
Query: 2 MPCCGYKGS 10
MP C Y+ S
Sbjct: 2116 MPLCHYRNS 2124
>sp|YORA_BPP1|UNCHARACTERIZED 36.0 kDa protein in|Escherichia phage P1 (Bacteriophage P1)
Query: 3 PCCG 6
PCCG
Sbjct: 232 PCCG 235
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 4 CCGYK 8
CCG+K
Sbjct: 265 CCGFK 269
>sp|DPOL_BPM2|DNA polymerase|Bacillus phage M2 (Bacteriophage M2)
Query: 4 CCGYKG 9
C GYKG
Sbjct: 103 CFGYKG 108
>sp|DPOL_BPB03|DNA polymerase|Bacillus phage B103 (Bacteriophage B103)
Query: 4 CCGYKG 9
C GYKG
Sbjct: 103 CFGYKG 108
>sp|NRAM_I71A2|NEURAMINIDASE A virus (strain A/Turkey/Oregon/1971
Query: 1 PMPCCGYKG 9
P+P C ++G
Sbjct: 88 PLPLCPFRG 96
>sp|GPB_BPPM2|UNCHARACTERIZED protein Gp-b*|Pseudoalteromonas phage PM2 (Bacteriophage PM2)
Query: 1 PMPCCGYKG 9
P PCC K
Sbjct: 18 PFPCCVLKS 26
47|SequenceR|240|231|CCTANPMPCC
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CTANPMP 8
C ANP+P
Sbjct: 81 CQANPIP 87
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CTANPMP 8
C ANP+P
Sbjct: 81 CQANPIP 87
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CTANPMP 8
C ANP+P
Sbjct: 81 CQANPIP 87
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1379 CCPVNFKKCC 1388
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1389 CCPVNFKKCC 1398
>sp|FIB31_BPHC1|PROBABLE tail fiber protein|Haemophilus phage HP1 (strain HP1c1)
Query: 3 TANPMPC 9
TAN +PC
Sbjct: 211 TANSLPC 217
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1375 CCPVNFKKCC 1384
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1371 CCPVNFKKCC 1380
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1370 CCPVNFKKCC 1379
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|VP10_WTV|NON-STRUCTURAL protein Pns10|Wound tumor virus (WTV)
Query: 1 CCTANPMPC 9
C T+ P PC
Sbjct: 113 CNTSTPSPC 121
>sp|MVP_PZSVT|MOVEMENT protein|Pelargonium zonate spot virus (isolate
Query: 3 TANPMPCC 10
TA+P+P C
Sbjct: 115 TADPLPGC 122
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|Y14A_BPT4|UNCHARACTERIZED 12.4 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)
Query: 2 CTANPMPC 9
CT P PC
Sbjct: 77 CTCKPKPC 84
>sp|CAPSD_FCVF9|CAPSID protein VP1|Feline calicivirus (strain F9) (FCV)
Query: 4 ANPMPCC 10
+NP+ CC
Sbjct: 34 SNPLMCC 40
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1382 CCPVNFKRCC 1391
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1383 CCPVNFKRCC 1392
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1371 CCPVNFKRCC 1380
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1381 CCPVNFKRCC 1390
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1391 CCPVNFKRCC 1400
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1373 CCPVNFKRCC 1382
>sp|CAPSD_FCVUR|CAPSID protein VP1|Feline calicivirus (strain Cat/United
Query: 5 NPMPCC 10
NP+ CC
Sbjct: 35 NPLMCC 40
>sp|CAPSD_FCVF4|CAPSID protein VP1|Feline calicivirus (strain Japanese F4)
Query: 5 NPMPCC 10
NP+ CC
Sbjct: 35 NPLMCC 40
>sp|CAPSD_FCVC6|CAPSID protein VP1|Feline calicivirus (strain CFI/68 FIV)
Query: 5 NPMPCC 10
NP+ CC
Sbjct: 35 NPLMCC 40
>sp|Y124_OSHVF|UNCHARACTERIZED protein ORF124|Ostreid herpesvirus 1 (isolate France)
Query: 2 CTANPMPCC 10
CT PCC
Sbjct: 157 CTTVKSPCC 165
48|SequenceR|245|236|HLHDSCCTAN
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 3 HDSCCT 8
HDSCC+
Sbjct: 5040 HDSCCS 5045
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 3 HDSCCT 8
HDSCC+
Sbjct: 5098 HDSCCS 5103
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 3 HDSCCT 8
HDSCC+
Sbjct: 5092 HDSCCS 5097
>sp|R1AB_CVRSD|REPLICASE polyprotein 1ab|Rat coronavirus (strain 681) (RCV-SDAV)
Query: 3 HDSCCT 8
HDSCC+
Sbjct: 137 HDSCCS 142
>sp|ICP22_EHV4|TRANSCRIPTIONAL regulator ICP22 homolog|Equine herpesvirus 4 (strain 1942)
Query: 4 DSCCTA 9
DSCCT
Sbjct: 223 DSCCTG 228
>sp|P4H_MIMIV|PUTATIVE prolyl 4-hydroxylase|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 HDSCCTAN 10
HDSCC ++
Sbjct: 147 HDSCCDSS 154
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 2 LHDSCCTAN 10
+HD+ C AN
Sbjct: 340 VHDAACPAN 348
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 2 LHDSCCTAN 10
+HD+ C AN
Sbjct: 340 VHDAACPAN 348
>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)
Query: 1 HLHDSCC 7
HL++ CC
Sbjct: 1366 HLNNGCC 1372
>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)
Query: 1 HLHDSCC 7
HL++ CC
Sbjct: 1366 HLNNGCC 1372
>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)
Query: 1 HLHDSCC 7
HL++ CC
Sbjct: 1366 HLNNGCC 1372
>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)
Query: 1 HLHDSCC 7
HL++ CC
Sbjct: 1366 HLNNGCC 1372
>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)
Query: 1 HLHDSCC 7
HL++ CC
Sbjct: 1366 HLNNGCC 1372
>sp|UL24_EHV4|PROTEIN UL24 homolog|Equine herpesvirus 4 (strain 1942)
Query: 1 HLHDSC 6
LHDSC
Sbjct: 123 QLHDSC 128
>sp|UL24_EHV1V|PROTEIN UL24 homolog|Equine herpesvirus 1 (strain V592)
Query: 1 HLHDSC 6
LHDSC
Sbjct: 123 QLHDSC 128
>sp|UL24_EHV1B|PROTEIN UL24 homolog|Equine herpesvirus 1 (strain Ab4p)
Query: 1 HLHDSC 6
LHDSC
Sbjct: 123 QLHDSC 128
>sp|VG67_BPML5|GENE 67 protein|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 3 HDSCC 7
HDSCC
Sbjct: 16 HDSCC 20
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 476 NLHDSC 481
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 3 HDSCCTA 9
HD CC +
Sbjct: 1807 HDGCCCS 1813
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 476 NLHDSC 481
>sp|SPHR_AMEPV|SPHEROIDIN moorei entomopoxvirus (AmEPV)
Query: 1 HLHDSCCTAN 10
H++D+C AN
Sbjct: 946 HVYDNCADAN 955
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 4 DSCCT 8
DSCCT
Sbjct: 308 DSCCT 312
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 476 NLHDSC 481
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 476 NLHDSC 481
>sp|DPOL_HBVCP|PROTEIN P|Chimpanzee hepatitis B virus (isolate
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 466 NLHDSC 471
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 4 DSCCT 8
DSCCT
Sbjct: 306 DSCCT 310
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 466 NLHDSC 471
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 479 NLHDSC 484
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 477 NLHDSC 482
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 476 NLHDSC 481
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 477 NLHDSC 482
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LHDSCCTAN 10
L+DSC T N
Sbjct: 7 LYDSCKTFN 15
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 479 NLHDSC 484
>sp|PG025_VACCW|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Western Reserve)
Query: 2 LHDSCCTAN 10
L+DSC T N
Sbjct: 7 LYDSCKTFN 15
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 476 NLHDSC 481
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 479 NLHDSC 484
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 472 NLHDSC 477
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 479 NLHDSC 484
>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 1 HLHDSCC 7
HL ++CC
Sbjct: 4281 HLKNNCC 4287
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 477 NLHDSC 482
>sp|36016_ASFK5|PROTEIN MGF 360-16R|African swine fever virus (isolate
Query: 2 LHDSCCTAN 10
+HD+C T N
Sbjct: 226 IHDACKTVN 234
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 479 NLHDSC 484
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 472 NLHDSC 477
>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)
Query: 4 DSCCTA 9
D CCTA
Sbjct: 569 DPCCTA 574
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LHDSC 6
LHDSC
Sbjct: 478 LHDSC 482
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 3 HDSCCTA 9
HD CC +
Sbjct: 1807 HDGCCCS 1813
>sp|P61_CILVC|UNCHARACTERIZED protein p61|Citrus leprosis virus C (isolate
Query: 1 HLHDSC 6
HLHD C
Sbjct: 358 HLHDIC 363
>sp|36016_ASFB7|PROTEIN MGF 360-16R|African swine fever virus (strain
Query: 2 LHDSCCTAN 10
+HD+C T N
Sbjct: 226 IHDACRTVN 234
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 479 NLHDSC 484
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 466 NLHDSC 471
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LHDSC 6
LHDSC
Sbjct: 478 LHDSC 482
>sp|36016_ASFP4|PROTEIN MGF 360-16R|African swine fever virus (isolate
Query: 2 LHDSCCTAN 10
+HD+C T N
Sbjct: 226 IHDACRTVN 234
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LHDSC 6
LHDSC
Sbjct: 478 LHDSC 482
49|SequenceR|250|241|DQPCCHLHDS
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCW|EARLY transcription factor 82 kDa|Vaccinia virus (strain Western Reserve)
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PCCHL 7
PCCH+
Sbjct: 27 PCCHV 31
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PCCHL 7
PCCH+
Sbjct: 27 PCCHV 31
>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 310 DTPCWKLHTS 319
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 310 DTPCWKLHTS 319
>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 310 DTPCWKLHTS 319
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 310 DTPCWKLHTS 319
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 310 DTPCWKLHTS 319
>sp|FUS_BRSVR|FUSION glycoprotein F0|Bovine respiratory syncytial virus (strain
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 310 DTPCWKLHTS 319
>sp|FUS_BRSVC|FUSION glycoprotein F0|Bovine respiratory syncytial virus (strain
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 310 DTPCWKLHTS 319
>sp|FUS_BRSVA|FUSION glycoprotein F0|Bovine respiratory syncytial virus (strain
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 308 DTPCWKLHTS 317
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 3 PCCHLHD 9
PCC L D
Sbjct: 443 PCCFLKD 449
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PCCHL 7
PCCH+
Sbjct: 27 PCCHV 31
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 5 CHLHDS 10
CH+HD+
Sbjct: 1404 CHVHDA 1409
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 5 CHLHDS 10
CH+HD+
Sbjct: 1404 CHVHDA 1409
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 5 CHLHDS 10
CH+HD+
Sbjct: 1318 CHVHDA 1323
>sp|RDRP_AMV|RNA-DIRECTED RNA polymerase 2a|Alfalfa mosaic virus (AMV)
Query: 1 DQPCCHLH 8
D PCC ++
Sbjct: 78 DSPCCRVY 85
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 QPCCHLHDS 10
Q CC + DS
Sbjct: 2556 QRCCQMKDS 2564
>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK
Query: 5 CHLHDS 10
CH+HD+
Sbjct: 1344 CHVHDA 1349
>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)
Query: 5 CHLHDS 10
CH+HD+
Sbjct: 1344 CHVHDA 1349
>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)
Query: 5 CHLHDS 10
CH+HD+
Sbjct: 1344 CHVHDA 1349
>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)
Query: 5 CHLHDS 10
CH+HD+
Sbjct: 1345 CHVHDA 1350
>sp|DPOLA_BPPM6|DNA-DIRECTED DNA polymerase|Pseudomonas phage M6
Query: 1 DQPCCHLHDS 10
D C LHDS
Sbjct: 136 DPLICELHDS 145
>sp|UL41_HCMVA|UNCHARACTERIZED protein UL41|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PCCHLHD 9
PC LHD
Sbjct: 116 PCLRLHD 122
50|SequenceR|255|246|LDCVTDQPCC
>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain
Query: 2 DCVTDQPCC 10
+CVT+ P C
Sbjct: 675 NCVTNAPLC 683
>sp|RDRP_PLRVW|PROTEIN P1-P2|Potato leafroll virus (strain
Query: 2 DCVTDQPCC 10
+C+T+ P C
Sbjct: 675 NCITNAPLC 683
>sp|GAG_IPMA|INTRACISTERNAL A-particle Gag-related polyprotein|Mouse intracisternal a-particle
Query: 3 CVTDQPC 9
CV QPC
Sbjct: 184 CVVRQPC 190
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 4 VTDQPCC 10
VTD+ CC
Sbjct: 251 VTDEQCC 257
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 4 VTDQPCC 10
VTD+ CC
Sbjct: 251 VTDEQCC 257
>sp|VL1_PAPVE|MAJOR capsid protein L1|European elk papillomavirus (EEPV)
Query: 3 CVTDQP 8
CVTD+P
Sbjct: 173 CVTDRP 178
>sp|VL1_OVPVD|MAJOR capsid protein L1|Odocoileus virginianus papillomavirus 1 (DPV)
Query: 3 CVTDQP 8
CVTD+P
Sbjct: 172 CVTDRP 177
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 2 DCVTDQPCC 10
DCV P C
Sbjct: 365 DCVRSVPVC 373
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 2 DCVTDQPCC 10
DCV P C
Sbjct: 365 DCVRSVPVC 373
>sp|PIF3_NPVAC|PER os infectivity factor 3|Autographa californica nuclear
Query: 1 LDCVTDQPC 9
L CVTDQ C
Sbjct: 62 LPCVTDQQC 70
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LDCVTDQPC 9
++C T+ PC
Sbjct: 2066 INCYTEGPC 2074
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LDCVTDQPC 9
++C T+ PC
Sbjct: 2066 INCYTEGPC 2074
>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 1 LDCVTD 6
+DCVTD
Sbjct: 3624 IDCVTD 3629
51|SequenceR|260|251|CKSQILDCVT
>sp|V212_FOWPN|PROBABLE serine/threonine-protein kinase FPV212|Fowlpox virus (strain
Query: 1 CKSQILDCV 9
CKS+ +DCV
Sbjct: 44 CKSKEIDCV 52
>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)
Query: 1 CKSQILDC 8
C QILDC
Sbjct: 585 CCIQILDC 592
>sp|HELI_GAHVM|DNA replication helicase|Gallid herpesvirus 2 (strain
Query: 3 SQILDCV 9
S+ILDC+
Sbjct: 89 SEILDCI 95
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVDRVLDCRT 1916
>sp|L_PIRVV|RNA-DIRECTED RNA polymerase L|Pirital mammarenavirus (isolate
Query: 1 CKSQILDCV 9
CKS+ L CV
Sbjct: 2173 CKSKSLGCV 2181
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 1 CKSQILDC 8
C+++ILDC
Sbjct: 11 CQNKILDC 18
52|SequenceR|265|256|NEKSLCKSQI
***** No hits found ******
53|SequenceR|270|261|LDTTANEKSL
***** No hits found ******
54|SequenceR|275|266|PLKTLLDTTA
>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate
Query: 1 PLKTLLDTTA 10
P+K LLDT A
Sbjct: 534 PIKALLDTGA 543
>sp|POL_FIVT2|POL polyprotein|Feline immunodeficiency virus (isolate TM2)
Query: 1 PLKTLLDTTA 10
P+K LLDT A
Sbjct: 61 PIKFLLDTGA 70
>sp|POL_FIVPE|POL polyprotein|Feline immunodeficiency virus (isolate Petaluma)
Query: 1 PLKTLLDTTA 10
P+K LLDT A
Sbjct: 62 PIKFLLDTGA 71
>sp|POL_FIVSD|POL polyprotein|Feline immunodeficiency virus (strain San
Query: 1 PLKTLLDTTA 10
P+K LLDT A
Sbjct: 62 PIKFLLDTGA 71
>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate
Query: 1 PLKTLLDTTA 10
P++ LLDT A
Sbjct: 531 PIRALLDTGA 540
>sp|ITP_GAHVM|INNER tegument protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 PLKTLLDT 8
PLK LLDT
Sbjct: 11 PLKVLLDT 18
>sp|POL_EIAVY|POL polyprotein|Equine infectious anemia virus (strain
Query: 1 PLKTLLDTTA 10
PL LLDT A
Sbjct: 99 PLNVLLDTGA 108
>sp|POL_EIAVC|POL polyprotein|Equine infectious anemia virus (isolate
Query: 1 PLKTLLDTTA 10
PL LLDT A
Sbjct: 99 PLNVLLDTGA 108
>sp|POL_EIAV9|POL polyprotein|Equine infectious anemia virus (isolate
Query: 1 PLKTLLDTTA 10
PL LLDT A
Sbjct: 99 PLNVLLDTGA 108
>sp|V143_NPVOP|ATP-DEPENDENT DNA helicase P143|Orgyia pseudotsugata multicapsid polyhedrosis virus
Query: 1 PLKTLLDT 8
P KTLLD+
Sbjct: 1090 PYKTLLDS 1097
>sp|YL805_MIMIV|UNCHARACTERIZED protein L805|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 PLKTLLD 7
PLKT+LD
Sbjct: 134 PLKTILD 140
55|SequenceR|280|271|GVTHAPLKTL
>sp|CAPSD_SHVX|CAPSID protein|Shallot virus X (ShVX)
Query: 1 GVTHAPLKTL 10
G+THA LKTL
Sbjct: 136 GITHADLKTL 145
>sp|ALPHA_BSMV|REPLICATION protein alpha-A|Barley stripe mosaic virus (BSMV)
Query: 1 GVTHAPLKTL 10
G+ H P++T
Sbjct: 1125 GIAHTPIRTF 1134
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 2 VTHAPLKTL 10
+TH+PL TL
Sbjct: 127 LTHSPLDTL 135
>sp|5057R_ASFWA|PROTEIN MGF 505-7R|African swine fever virus (isolate
Query: 4 HAPLKTL 10
HAP KTL
Sbjct: 303 HAPRKTL 309
>sp|5057R_ASFP4|PROTEIN MGF 505-7R|African swine fever virus (isolate
Query: 4 HAPLKTL 10
HAP KTL
Sbjct: 303 HAPRKTL 309
56|SequenceR|285|276|DCKVDGVTHA
>sp|DNLI_BPT3|DNA ligase|Enterobacteria phage T3 (Bacteriophage T3)
Query: 1 DCKVDGV 7
DCK DGV
Sbjct: 32 DCKYDGV 38
>sp|VG47_ICHVA|SUBTILISIN-LIKE protease|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 DCKVDGVTHA 10
DC DG T A
Sbjct: 136 DCGADGFTQA 145
>sp|TRAP_TGMVY|TRANSCRIPTIONAL activator protein|Tomato golden mosaic virus (strain
Query: 1 DCKVDGVTH 9
DC+ +G TH
Sbjct: 42 DCRNNGFTH 50
>sp|VF205_IIV6|PUTATIVE DNA ligase 205R|Invertebrate iridescent virus 6 (IIV-6)
Query: 2 CKVDGVT 8
CK+DGV+
Sbjct: 100 CKLDGVS 106
>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus
Query: 4 VDGVTH 9
+DGVTH
Sbjct: 1186 IDGVTH 1191
>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus
Query: 4 VDGVTH 9
+DGVTH
Sbjct: 1186 IDGVTH 1191
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 CKVDGV 7
CK+DGV
Sbjct: 208 CKIDGV 213
57|SequenceR|290|281|CSVEMDCKVD
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 CSVEMDCKV 9
C +E+DC V
Sbjct: 272 CDIEVDCDV 280
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 CSVEMDCKV 9
C +E+DC V
Sbjct: 272 CDIEVDCDV 280
>sp|DPOL_GAHVM|DNA polymerase catalytic subunit|Gallid herpesvirus 2 (strain
Query: 1 CSVEMDCKVD 10
C +E++C VD
Sbjct: 329 CDIEINCTVD 338
>sp|VP5_IPNVN|PROTEIN VP5|Infectious pancreatic necrosis virus (strain
Query: 1 CSVEMDCKVD 10
C+++M+C+ D
Sbjct: 83 CTLQMECEPD 92
>sp|YL111_MIMIV|UNCHARACTERIZED protein L111|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CSVEMDCKVD 10
C VE +C++D
Sbjct: 45 CQVEDNCEID 54
>sp|VF224_IIV6|PROBABLE cysteine proteinase 224L|Invertebrate iridescent virus 6 (IIV-6)
Query: 1 CSVEMDCKVD 10
CS ++CK D
Sbjct: 167 CSRNIECKTD 176
>sp|VP5_IPNVS|PROTEIN VP5|Infectious pancreatic necrosis virus (strain
Query: 1 CSVEMDCKVD 10
C+++M+C+ D
Sbjct: 68 CTLQMECEPD 77
>sp|DPO13_BPK64|DEPOLYMERASE, capsule K21-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)
Query: 1 CSVEMDCKVD 10
C++E + K+D
Sbjct: 21 CAIEFNTKID 30
>sp|KR15_ICHVA|PROTEIN kinase ORF15|Ictalurid herpesvirus 1 (strain Auburn)
Query: 4 EMDCKVD 10
EM CK+D
Sbjct: 142 EMACKID 148
>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)
Query: 2 SVEMDCKVD 10
++E+DC VD
Sbjct: 1430 TLEIDCLVD 1438
>sp|POL2_TOTV|RNA2 polyprotein|Tomato torrado virus (isolate Solanum
Query: 1 CSVEMDCKV 9
C + + CKV
Sbjct: 710 CHIHLQCKV 718
>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)
Query: 1 CSVEMDCKV 9
C +E+DC++
Sbjct: 277 CDIEIDCEI 285
58|SequenceR|295|286|TYGDPCSVEM
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 TYGDPCSVE 9
T GDPC++E
Sbjct: 651 TRGDPCNLE 659
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 99 SYNDPCSLQ 107
>sp|G1P_BPIF1|GENE 1 protein|Escherichia phage If1 (Bacteriophage If1)
Query: 2 YGDPCSVEM 10
Y PCSVE+
Sbjct: 334 YITPCSVEL 342
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 103 SYSDPCSLK 111
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 103 SYSDPCSLK 111
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 103 SYSDPCSLK 111
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 103 SYSDPCSLK 111
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 103 SYSDPCSLK 111
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 TYGDPCSVE 9
+Y DPC+++
Sbjct: 101 SYSDPCAIQ 109
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 103 SYSDPCSLK 111
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 TYGDPCSVE 9
+Y DPC+++
Sbjct: 103 SYSDPCAIQ 111
>sp|VP39_NPVLD|MAJOR capsid protein|Lymantria dispar multicapsid nuclear polyhedrosis
Query: 2 YGDPCS 7
YG PCS
Sbjct: 31 YGSPCS 36
>sp|VS48_TBRVE|SATELLITE RNA 48 kDa protein|Tomato black ring virus (strain
Query: 1 TYGDPC 6
TY DPC
Sbjct: 29 TYQDPC 34
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 3 GDPCSVE 9
G+PCS++
Sbjct: 535 GNPCSID 541
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 3 GDPCSVE 9
G+PCS++
Sbjct: 536 GNPCSID 542
>sp|TEV1_BPT4|INTRON-ASSOCIATED endonuclease 1|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 TYGDPCS 7
T+GD CS
Sbjct: 95 TFGDTCS 101
>sp|VS48_TBRVS|SATELLITE RNA 48 kDa protein|Tomato black ring virus satellite
Query: 1 TYGDPC 6
TY DPC
Sbjct: 29 TYQDPC 34
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 GDPCSVE 9
G+PCS++
Sbjct: 528 GNPCSID 534
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GDPCSVE 9
GDPC +E
Sbjct: 463 GDPCWLE 469
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GDPCSVE 9
GDPC +E
Sbjct: 448 GDPCWLE 454
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 TYGDPC 6
TYGD C
Sbjct: 1551 TYGDDC 1556
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 TYGDPC 6
TYGD C
Sbjct: 1550 TYGDDC 1555
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 TYGDPC 6
TYGD C
Sbjct: 1550 TYGDDC 1555
>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United
Query: 1 TYGDPC 6
TYGD C
Sbjct: 1542 TYGDDC 1547
59|SequenceR|300|291|QLRCCTYGDP
>sp|LEF9_NPVOP|LATE expression factor 9|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 2 LRCCTYGDP 10
L C YGDP
Sbjct: 275 LECLLYGDP 283
>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)
Query: 3 RCCTYGDP 10
+CC +G+P
Sbjct: 1198 KCCHHGEP 1205
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 5 CTYGDP 10
CTYG+P
Sbjct: 1715 CTYGEP 1720
>sp|VTF3L_VACCT|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Tian Tan)
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VTF3L_VACCA|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Ankara)
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VTF3L_RABPU|INTERMEDIATE transcription factor 3 large|Rabbitpox virus (strain Utrecht)
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VTF3L_MONPZ|INTERMEDIATE transcription factor 3 large|Monkeypox virus (strain
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VTF3L_ECTVM|INTERMEDIATE transcription factor 3 large|Ectromelia virus (strain Moscow)
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VTF3L_CAMPS|INTERMEDIATE transcription factor 3 large|Camelpox virus (strain CMS)
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VTF3L_CAMPM|INTERMEDIATE transcription factor 3 large|Camelpox virus (strain M-96)
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VITF3_VARV|INTERMEDIATE transcription factor 3 large|Variola virus
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VITF3_VAR67|INTERMEDIATE transcription factor 3 large|Variola virus (isolate
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VITF3_VACCW|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Western
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VITF3_VACCC|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Copenhagen)
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VITF3_MONPV|INTERMEDIATE transcription factor 3 large|Monkeypox virus (MPXV)
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 2 LRCCTYGDP 10
L+C TYG P
Sbjct: 1615 LKCFTYGLP 1623
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 2 LRCCTYGDP 10
L+C TYG P
Sbjct: 1615 LKCFTYGLP 1623
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 5 CTYGDP 10
CTYG+P
Sbjct: 1715 CTYGEP 1720
>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate
Query: 2 LRCCTYGD 9
+R C YGD
Sbjct: 2624 VRACVYGD 2631
>sp|P32_MCMVK|UNCHARACTERIZED protein p32|Maize chlorotic mottle virus (isolate
Query: 5 CTYGDP 10
CTYGDP
Sbjct: 5 CTYGDP 10
>sp|DPOL_OSHVF|DNA polymerase|Ostreid herpesvirus 1 (isolate France)
Query: 1 QLRCCTYG 8
QLRC YG
Sbjct: 1331 QLRCKRYG 1338
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 LRCCT 6
LRCCT
Sbjct: 1433 LRCCT 1437
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 LRCCT 6
LRCCT
Sbjct: 1347 LRCCT 1351
>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate
Query: 1 QLRCCTYGD 9
+++C TYG+
Sbjct: 1587 KMKCITYGE 1595
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 CCTYGD 9
CC YG+
Sbjct: 101 CCAYGE 106
>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)
Query: 4 CCTYGD 9
CC YG+
Sbjct: 101 CCAYGE 106
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 2 LRCCTYGD 9
+RCCT D
Sbjct: 521 VRCCTGND 528
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 2 LRCCTYGD 9
+RCCT D
Sbjct: 521 VRCCTGND 528
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QLRCCTYGDP 10
Q R TY DP
Sbjct: 477 QSRLVTYSDP 486
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QLRCCTYGDP 10
Q R TY DP
Sbjct: 477 QSRLVTYSDP 486
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CCTYGD 9
CC++GD
Sbjct: 5048 CCSHGD 5053
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CCTYGD 9
CC++GD
Sbjct: 5068 CCSHGD 5073
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CCTYGD 9
CC++GD
Sbjct: 5098 CCSHGD 5103
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 LRCCT 6
LRCCT
Sbjct: 6358 LRCCT 6362
>sp|TIPI_LAMBD|TAIL tip assembly protein I|Escherichia phage lambda (Bacteriophage
Query: 3 RCCTYGD 9
R C YGD
Sbjct: 16 RICLYGD 22
>sp|VG70_ICHVA|UNCHARACTERIZED protein ORF70|Ictalurid herpesvirus 1 (strain Auburn)
Query: 2 LRCCTYGDP 10
L+C +GDP
Sbjct: 176 LQCAQHGDP 184
>sp|GP_HAZVJ|ENVELOPMENT polyprotein|Hazara virus (isolate JC280)
Query: 1 QLRCCTYGDP 10
+L+ CT+G P
Sbjct: 1042 KLQSCTHGSP 1051
>sp|YR811_MIMIV|PUTATIVE ariadne-like RING finger protein|Acanthamoeba polyphaga mimivirus
Query: 1 QLRCCTYGDP 10
+L C TY DP
Sbjct: 309 RLICRTYDDP 318
60|SequenceR|305|296|GWAGSQLRCC
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GWAGSQLRC 9
GW GSQ C
Sbjct: 762 GWKGSQSIC 770
>sp|DEPOL_BPK36|DEPOLYMERASE, capsule K63-specific|Klebsiella phage KP36 (Bacteriophage KP36)
Query: 1 GWAGSQLRC 9
GWA S RC
Sbjct: 533 GWAESGRRC 541
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 WAGSQLRC 9
W+G +L+C
Sbjct: 782 WSGKELKC 789
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 WAGSQLRC 9
W+G +L+C
Sbjct: 782 WSGKELKC 789
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 GWAGSQLRCC 10
G +GS RCC
Sbjct: 1037 GHSGSTFRCC 1046
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 WAGSQLRC 9
W+G +L+C
Sbjct: 782 WSGKELKC 789
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 WAGSQLRC 9
W+G +L+C
Sbjct: 782 WSGKELKC 789
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 GWAGSQLRCC 10
G +GS RCC
Sbjct: 1042 GHSGSTFRCC 1051
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 782 WTGKELKC 789
>sp|YR024_MIMIV|UNCHARACTERIZED protein R24|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 WAGSQLRCC 10
W+GS CC
Sbjct: 131 WSGSFDACC 139
>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United
Query: 1 GWAGSQLR 8
GW GS+ R
Sbjct: 314 GWKGSRCR 321
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 781 WKGKELKC 788
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 781 WKGKELKC 788
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 781 WKGKELKC 788
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 781 WKGKELKC 788
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 781 WKGKELKC 788
>sp|POL_SIVTN|GAG-POL polyprotein|Simian immunodeficiency virus (isolate TAN1)
Query: 2 WAGSQLR 8
WAGS+L+
Sbjct: 36 WAGSELQ 42
>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus
Query: 2 WAGSQLRCC 10
W G + CC
Sbjct: 252 WTGFKTACC 260
>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 2 WAGSQLRCC 10
W G + CC
Sbjct: 252 WTGFKTACC 260
>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus
Query: 2 WAGSQLRCC 10
W G + CC
Sbjct: 252 WTGFKTACC 260
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 GWAGSQLR 8
GW SQ+R
Sbjct: 1814 GWVASQIR 1821
>sp|EXLYS_BPDPK|PEPTIDOGLYCAN hydrolase gp181|Pseudomonas phage phiKZ
Query: 1 GWAGSQ 6
GW GSQ
Sbjct: 1355 GWRGSQ 1360
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 WAGSQLRC 9
W G ++RC
Sbjct: 211 WFGQKVRC 218
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1035 GHSGSSFKCC 1044
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1036 GHSGSSFKCC 1045
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1035 GHSGSSFKCC 1044
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 782 WKGRELKC 789
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 783 WKGRELKC 790
>sp|NINX_BPP22|PUTATIVE protein ninX|Salmonella phage P22 (Bacteriophage P22)
Query: 1 GWAGSQLRCC 10
GW G+Q C
Sbjct: 30 GWQGTQEDSC 39
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1035 GHSGSSFKCC 1044
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 783 WKGRELKC 790
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1036 GHSGSTFKCC 1045
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1037 GHSGSTFKCC 1046
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 783 WKGKELKC 790
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1039 GHSGSSFKCC 1048
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 783 WKGKELKC 790
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 WAGSQLRCC 10
W G + CC
Sbjct: 258 WTGFKSSCC 266
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 WAGSQLRCC 10
W G + CC
Sbjct: 258 WTGFKSSCC 266
>sp|VE6_HPV56|PROTEIN E6|Human papillomavirus 56
Query: 1 GWAGSQLRC 9
GW GS L C
Sbjct: 134 GWTGSCLGC 142
>sp|GAG_SIVTN|GAG polyprotein|Simian immunodeficiency virus (isolate TAN1)
Query: 2 WAGSQLR 8
WAGS+L+
Sbjct: 36 WAGSELQ 42
61|SequenceR|310|301|TFPCCGWAGS
>sp|MATA_BPGA|MATURATION protein A|Enterobacteria phage GA (Bacteriophage GA)
Query: 1 TFPCCGWAGS 10
T P GW+G+
Sbjct: 334 TLPASGWSGT 343
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 4 CCGW 7
CCGW
Sbjct: 2221 CCGW 2224
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 TFPCCGWA 8
T PCCG A
Sbjct: 4685 TVPCCGVA 4692
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 4 CCGW 7
CCGW
Sbjct: 14 CCGW 17
>sp|VP03_ALHV1|PROBABLE tegument protein antigen 3|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 TFPCCGWA 8
T P CGW
Sbjct: 303 TEPMCGWG 310
>sp|DPOL_FRG3G|PUTATIVE DNA polymerase 060R|Frog virus 3 (isolate Goorha)
Query: 2 FPCCGW 7
P CGW
Sbjct: 121 LPTCGW 126
>sp|TRM3_PSHV1|TRIPARTITE terminase subunit 3|Psittacid herpesvirus 1 (isolate Amazon
Query: 2 FPCCGWA 8
FPC WA
Sbjct: 62 FPCRAWA 68
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 4 CCGWAG 9
C GW+G
Sbjct: 309 CAGWSG 314
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 4 CCGWAG 9
C GW+G
Sbjct: 309 CAGWSG 314
>sp|MVP_TUMVQ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Quebec)
Query: 4 CCGWAG 9
C GW+G
Sbjct: 309 CAGWSG 314
>sp|MVP_TUMVJ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Japanese)
Query: 4 CCGWAG 9
C GW+G
Sbjct: 309 CAGWSG 314
>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum
Query: 2 FPCC 5
FPCC
Sbjct: 3040 FPCC 3043
>sp|US03_GAHVM|PROTEIN kinase US3 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 4 CCGWAGS 10
C GW+G+
Sbjct: 252 CYGWSGT 258
>sp|US03_GAHVG|SERINE/THREONINE-PROTEIN kinase US3 homolog|Gallid herpesvirus 2 (strain GA)
Query: 4 CCGWAGS 10
C GW+G+
Sbjct: 252 CYGWSGT 258
>sp|NS1AB_OASV1|NON-STRUCTURAL polyprotein 1AB|Ovine astrovirus 1 (OAstV-1)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 1061 PQCGWS 1066
>sp|Y112_OSHVF|UNCHARACTERIZED protein ORF112|Ostreid herpesvirus 1 (isolate France)
Query: 4 CCGWAGS 10
CC W G+
Sbjct: 259 CCFWIGT 265
>sp|Y04P_BPT4|UNCHARACTERIZED 39.0 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 TFP---CCGWAG 9
T+P CGW G
Sbjct: 217 TYPFKNICGWEG 228
>sp|Y124_OSHVF|UNCHARACTERIZED protein ORF124|Ostreid herpesvirus 1 (isolate France)
Query: 3 PCCG 6
PCCG
Sbjct: 163 PCCG 166
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|OBP_GAHVM|REPLICATION origin-binding protein|Gallid herpesvirus 2 (strain
Query: 4 CCGWA 8
CC WA
Sbjct: 634 CCKWA 638
>sp|TUBE2_BPT7|TAIL tubular protein gp12|Escherichia phage T7 (Bacteriophage T7)
Query: 5 CGWAGS 10
CGW G+
Sbjct: 781 CGWEGN 786
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CCGW 7
CCGW
Sbjct: 343 CCGW 346
>sp|GPB_BPPM2|UNCHARACTERIZED protein Gp-b*|Pseudoalteromonas phage PM2 (Bacteriophage PM2)
Query: 2 FPCC 5
FPCC
Sbjct: 19 FPCC 22
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PCCGW 7
PC GW
Sbjct: 13 PCYGW 17
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 3 PCCGW 7
PC GW
Sbjct: 13 PCYGW 17
>sp|VF233_ASFB7|UNCHARACTERIZED protein H233R|African swine fever virus (strain
Query: 1 TFPCCG 6
TFP CG
Sbjct: 61 TFPSCG 66
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 PCCGW 7
P CGW
Sbjct: 2855 PLCGW 2859
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CCGW 7
CCGW
Sbjct: 343 CCGW 346
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CCGW 7
CCGW
Sbjct: 343 CCGW 346
>sp|FIB37_BPT2|LONG tail fiber protein Gp37|Enterobacteria phage T2 (Bacteriophage T2)
Query: 6 GWAGS 10
GWAGS
Sbjct: 814 GWAGS 818
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CCGW 7
CCGW
Sbjct: 343 CCGW 346
>sp|ENV_EIAVW|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 3 PCCGW 7
PCCG+
Sbjct: 790 PCCGF 794
>sp|YORA_BPP1|UNCHARACTERIZED 36.0 kDa protein in|Escherichia phage P1 (Bacteriophage P1)
Query: 3 PCCG 6
PCCG
Sbjct: 232 PCCG 235
>sp|ENV_EIAVC|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 3 PCCGW 7
PCCG+
Sbjct: 790 PCCGF 794
>sp|ENV_EIAV9|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 3 PCCGW 7
PCCG+
Sbjct: 790 PCCGF 794
>sp|ENV_EIAVY|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 3 PCCGW 7
PCCG+
Sbjct: 790 PCCGF 794
>sp|ENV_EIAV3|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 3 PCCGW 7
PCCG+
Sbjct: 790 PCCGF 794
>sp|ENV_EIAV2|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 3 PCCGW 7
PCCG+
Sbjct: 790 PCCGF 794
>sp|ENV_EIAV1|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 3 PCCGW 7
PCCG+
Sbjct: 790 PCCGF 794
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3255 PGCGWS 3260
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3254 PGCGWS 3259
>sp|KITH_ASFM2|THYMIDINE kinase|African swine fever virus (isolate
Query: 2 FPCCGW 7
FP C W
Sbjct: 133 FPYCSW 138
>sp|ENV_EIAV5|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 3 PCCGW 7
PCCG+
Sbjct: 791 PCCGF 795
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3254 PGCGWS 3259
>sp|KITH_ASFWA|THYMIDINE kinase|African swine fever virus (isolate
Query: 2 FPCCGW 7
FP C W
Sbjct: 133 FPYCSW 138
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3254 PGCGWS 3259
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3254 PGCGWS 3259
>sp|KITH_ASFB7|THYMIDINE kinase|African swine fever virus (strain
Query: 2 FPCCGW 7
FP C W
Sbjct: 133 FPYCSW 138
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3254 PGCGWS 3259
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3256 PGCGWS 3261
>sp|KITH_ASFP4|THYMIDINE kinase|African swine fever virus (isolate
Query: 2 FPCCGW 7
FP C W
Sbjct: 133 FPYCSW 138
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3254 PGCGWS 3259
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3256 PGCGWS 3261
>sp|KITH_ASFK5|THYMIDINE kinase|African swine fever virus (isolate
Query: 2 FPCCGW 7
FP C W
Sbjct: 133 FPYCNW 138
>sp|YL15_ADE41|UNCHARACTERIZED 12.4 kDa protein in|Human adenovirus F serotype 41
Query: 1 TFPCCGW 7
TFP GW
Sbjct: 22 TFPVGGW 28
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 2 FPCC 5
FPCC
Sbjct: 156 FPCC 159
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 2 FPCC 5
FPCC
Sbjct: 156 FPCC 159
62|SequenceR|315|306|CCVAQTFPCC
>sp|Y074_NPVOP|UNCHARACTERIZED 19.5 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 2 CVAQTFPCC 10
C+ TF CC
Sbjct: 158 CIVTTFTCC 166
>sp|Y074_NPVAC|UNCHARACTERIZED 30.6 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 2 CVAQTFPCC 10
C+ T+ CC
Sbjct: 249 CIVDTYNCC 257
>sp|US10_EHV1V|VIRION protein US10 homolog|Equine herpesvirus 1 (strain V592)
Query: 1 CCVAQTFPC 9
CC+ F C
Sbjct: 142 CCLGHAFAC 150
>sp|US10_EHV1K|VIRION protein US10 homolog|Equine herpesvirus 1 (strain Kentucky
Query: 1 CCVAQTFPC 9
CC+ F C
Sbjct: 142 CCLGHAFAC 150
>sp|US10_EHV1B|VIRION protein US10 homolog|Equine herpesvirus 1 (strain Ab4p)
Query: 1 CCVAQTFPC 9
CC+ F C
Sbjct: 142 CCLGHAFAC 150
63|SequenceR|320|311|HIHDECCVAQ
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 HIHDECCVAQ 10
HI DECC+ +
Sbjct: 1366 HIEDECCIKE 1375
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 HIHDECCVAQ 10
H+ D CCV +
Sbjct: 1423 HVRDNCCVKE 1432
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 HIHDECCVAQ 10
H+ D CCV +
Sbjct: 1423 HVKDNCCVKE 1432
>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)
Query: 1 HIHDECCV 8
H+ +CCV
Sbjct: 1364 HVETDCCV 1371
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 HIHDECCV 8
H+ +CCV
Sbjct: 1364 HVETDCCV 1371
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 HIHDECCV 8
H+ +CCV
Sbjct: 1364 HVETDCCV 1371
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 HIHDECCV 8
H+ +CCV
Sbjct: 1364 HVETDCCV 1371
>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)
Query: 1 HIHDECCV 8
H+ +CCV
Sbjct: 1364 HVETDCCV 1371
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 3 HDECC 7
H+ECC
Sbjct: 1779 HEECC 1783
>sp|GH_ELHVK|ENVELOPE glycoprotein H|Elephantid herpesvirus 1 (isolate Asian
Query: 1 HIHDECCV 8
H+H E C+
Sbjct: 31 HVHSESCL 38
>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 HIHDECCV 8
+IH CCV
Sbjct: 599 YIHSCCCV 606
>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 HIHDECCV 8
+IH CCV
Sbjct: 599 YIHSCCCV 606
>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 HIHDECCV 8
+IH CCV
Sbjct: 596 YIHSCCCV 603
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 3 HDECC 7
H+ECC
Sbjct: 1779 HEECC 1783
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 3 HDECCVAQ 10
HD CC ++
Sbjct: 1807 HDGCCCSK 1814
>sp|P4H_MIMIV|PUTATIVE prolyl 4-hydroxylase|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 HDECC 7
HD CC
Sbjct: 147 HDSCC 151
>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)
Query: 1 HIHDECCVAQ 10
H+++ CC+ +
Sbjct: 1366 HLNNGCCIME 1375
>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)
Query: 1 HIHDECCVAQ 10
H+++ CC+ +
Sbjct: 1366 HLNNGCCIME 1375
>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)
Query: 1 HIHDECCVAQ 10
H+++ CC+ +
Sbjct: 1366 HLNNGCCIME 1375
>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)
Query: 1 HIHDECCVAQ 10
H+++ CC+ +
Sbjct: 1366 HLNNGCCIME 1375
>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)
Query: 1 HIHDECCVAQ 10
H+++ CC+ +
Sbjct: 1366 HLNNGCCIME 1375
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 IHDECCV 8
IHD C V
Sbjct: 1540 IHDNCAV 1546
>sp|MVP_ZYMVC|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 HIHDECCV 8
+IH CCV
Sbjct: 596 YIHSCCCV 603
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 3 HDECC 7
HD CC
Sbjct: 5040 HDSCC 5044
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 3 HDECCVAQ 10
HD CC ++
Sbjct: 1807 HDGCCCSK 1814
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 3 HDECC 7
HD CC
Sbjct: 5098 HDSCC 5102
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 3 HDECC 7
HD CC
Sbjct: 5092 HDSCC 5096
>sp|MVP_ZYMVR|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 HIHDECCV 8
+IH CCV
Sbjct: 599 YIHSCCCV 606
>sp|MVP_ZYMVS|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 HIHDECCV 8
+IH CCV
Sbjct: 599 YIHSCCCV 606
>sp|VF350_IIV3|UNCHARACTERIZED protein 026R|Invertebrate iridescent virus 3 (IIV-3)
Query: 5 ECCVA 9
ECCVA
Sbjct: 139 ECCVA 143
>sp|R1AB_CVRSD|REPLICASE polyprotein 1ab|Rat coronavirus (strain 681) (RCV-SDAV)
Query: 3 HDECC 7
HD CC
Sbjct: 137 HDSCC 141
64|SequenceR|325|316|GAPCCHIHDE
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|ETF2_VACCW|EARLY transcription factor 82 kDa|Vaccinia virus (strain Western Reserve)
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PCCHI 7
PCCH+
Sbjct: 27 PCCHV 31
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PCCHI 7
PCCH+
Sbjct: 27 PCCHV 31
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PCCHI 7
PCCH+
Sbjct: 27 PCCHV 31
>sp|YR327_MIMIV|UNCHARACTERIZED protein R327|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 PCCHIHDE 10
PCC I D+
Sbjct: 610 PCCFIKDQ 617
>sp|ENLYS_METM2|PSEUDOMUREIN endoisopeptidase|Methanobacterium phage psiM2 (PsiM2)
Query: 1 GAPCC 5
GAPCC
Sbjct: 284 GAPCC 288
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 GAPCCHIH 8
GAP CHI+
Sbjct: 566 GAPPCHIY 573
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GAPCCHI 7
GAP CHI
Sbjct: 566 GAPPCHI 572
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 5 CHIHD 9
CH+HD
Sbjct: 1404 CHVHD 1408
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 5 CHIHD 9
CH+HD
Sbjct: 1404 CHVHD 1408
>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK
Query: 5 CHIHD 9
CH+HD
Sbjct: 1344 CHVHD 1348
>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)
Query: 5 CHIHD 9
CH+HD
Sbjct: 1344 CHVHD 1348
>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)
Query: 5 CHIHD 9
CH+HD
Sbjct: 1344 CHVHD 1348
>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)
Query: 5 CHIHD 9
CH+HD
Sbjct: 1345 CHVHD 1349
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 5 CHIHD 9
CH+HD
Sbjct: 1318 CHVHD 1322
>sp|SLFN_VACCW|SCHLAFEN-LIKE protein|Vaccinia virus (strain Western Reserve)
Query: 1 GAPCCHIH 8
G CC++H
Sbjct: 23 GKECCYVH 30
>sp|VP2_BTV13|OUTER capsid protein VP2|Bluetongue virus 13 (isolate USA)
Query: 1 GAPCCHIH 8
GA C H+H
Sbjct: 159 GAQCHHVH 166
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 GAPCCHIH 8
G PC +IH
Sbjct: 2091 GDPCANIH 2098
>sp|VP2_BTV3V|OUTER capsid protein VP2|Bluetongue virus 3 (isolate South
Query: 4 CCHIHDE 10
CCH+ E
Sbjct: 162 CCHVRTE 168
>sp|SLFN_VACCC|SCHLAFEN-LIKE protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GAPCCHIH 8
G CC++H
Sbjct: 23 GKECCYVH 30
>sp|NS1_PAVBP|INITIATOR protein NS1|Bovine parvovirus 1 (BPV-1)
Query: 4 CCHIHDE 10
C HIH E
Sbjct: 583 CAHIHQE 589
>sp|RPB2_ASFK5|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate
Query: 1 GAPCCHIHD 9
G+ CH HD
Sbjct: 165 GSNRCHTHD 173
>sp|ENLYS_BPM10|PSEUDOMUREIN endoisopeptidase PeiW|Methanothermobacter phage psiM100
Query: 1 GAPCC 5
G PCC
Sbjct: 262 GVPCC 266
>sp|RDRP_AMV|RNA-DIRECTED RNA polymerase 2a|Alfalfa mosaic virus (AMV)
Query: 2 APCCHIH 8
+PCC ++
Sbjct: 79 SPCCRVY 85
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GAPCC 5
G PCC
Sbjct: 4267 GVPCC 4271
>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus
Query: 1 GAPCC 5
G PCC
Sbjct: 93 GGPCC 97
>sp|PB2_QRFVE|POLYMERASE basic protein 2|Quaranfil virus (isolate
Query: 1 GAPCCHIHD 9
G PC HD
Sbjct: 334 GLPCSKSHD 342
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 APCCHI 7
A CCH+
Sbjct: 3229 AACCHL 3234
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 2 APCCHI 7
A CCH+
Sbjct: 3212 AACCHL 3217
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 2 APCCHI 7
A CCH+
Sbjct: 3204 AACCHL 3209
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 APCCHI 7
A CCH+
Sbjct: 3229 AACCHL 3234
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 2 APCCHI 7
A CCH+
Sbjct: 3200 AACCHL 3205
>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)
Query: 5 CHIHDE 10
C+IHD+
Sbjct: 1258 CYIHDD 1263
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 APCCHI 7
A CCH+
Sbjct: 3206 AACCHL 3211
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 2 APCCHI 7
A CCH+
Sbjct: 3212 AACCHL 3217
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 2 APCCHI 7
A CCH+
Sbjct: 3204 AACCHL 3209
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 2 APCCHI 7
A CCH+
Sbjct: 3200 AACCHL 3205
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 APCCHI 7
A CCH+
Sbjct: 3206 AACCHL 3211
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 3 PCCHIHD 9
PCC I D
Sbjct: 190 PCCQITD 196
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GAPCCHI 7
GAP C+I
Sbjct: 565 GAPACNI 571
65|SequenceR|330|321|TDCTFGAPCC
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 DCTFGAP 8
+CTFGAP
Sbjct: 1638 NCTFGAP 1644
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 DCTFGAP 8
+CTFGAP
Sbjct: 1638 NCTFGAP 1644
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 CTFGAPCC 10
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 CTFGAPCC 10
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 CTFGAPCC 10
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 CTFGAPCC 10
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 2 DCTFGAP 8
DCT+G P
Sbjct: 1714 DCTYGEP 1720
>sp|POL_IPMA|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle
Query: 2 DCTFGAPCC 10
DC F P C
Sbjct: 120 DCFFSIPLC 128
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 2 DCTFGAP 8
DCT+G P
Sbjct: 1714 DCTYGEP 1720
>sp|TGB1_SHVX|MOVEMENT and silencing protein TGBp1|Shallot virus X (ShVX)
Query: 3 CTFGAP 8
CT GAP
Sbjct: 52 CTLGAP 57
>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca
Query: 1 TDCTFGAPCC 10
+DCT P C
Sbjct: 5413 SDCTVQYPMC 5422
>sp|PG083_VACCW|CORE protease OPG083|Vaccinia virus (strain Western Reserve)
Query: 2 DCTFGA 7
+CTFGA
Sbjct: 306 ECTFGA 311
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DCTFGA 7
+CTFGA
Sbjct: 306 ECTFGA 311
>sp|VG31_BPML5|GENE 31 protein|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 2 DCTFGA 7
DCT+GA
Sbjct: 382 DCTWGA 387
>sp|VG12_GAHVM|UNCHARACTERIZED gene 12 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 3 CTFGAP 8
C FGAP
Sbjct: 90 CEFGAP 95
>sp|I7_FOWPN|CORE protease I7 homolog|Fowlpox virus (strain NVSL) (FPV)
Query: 3 CTFGAPCC 10
C F A CC
Sbjct: 334 CLFMAVCC 341
>sp|VF077_IIV3|PUTATIVE zinc finger protein 034R|Invertebrate iridescent virus 3 (IIV-3)
Query: 3 CTFGAPC 9
C FGA C
Sbjct: 189 CYFGAQC 195
66|SequenceR|335|326|CTGKQTDCTF
>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry
Query: 2 TGKQTDCTF 10
T KQ DC F
Sbjct: 886 TAKQADCVF 894
>sp|GP_INSV|ENVELOPMENT polyprotein|Impatiens necrotic spot virus (INSV)
Query: 1 CTGKQTDC 8
CTGK +DC
Sbjct: 668 CTGKCSDC 675
>sp|G3P_BPM13|ATTACHMENT protein G3P|Enterobacteria phage M13 (Bacteriophage M13)
Query: 1 CTGKQTDC 8
CTG +T C
Sbjct: 64 CTGDETQC 71
>sp|G3P_BPFD|ATTACHMENT protein G3P|Enterobacteria phage fd (Bacteriophage fd)
Query: 1 CTGKQTDC 8
CTG +T C
Sbjct: 64 CTGDETQC 71
>sp|G3P_BPF1|ATTACHMENT protein G3P|Enterobacteria phage f1 (Bacteriophage f1)
Query: 1 CTGKQTDC 8
CTG +T C
Sbjct: 64 CTGDETQC 71
>sp|Y567_ATV|STRUCTURAL protein ORF567|Acidianus two-tailed virus (ATV)
Query: 2 TGKQTDCT 9
T KQT CT
Sbjct: 414 TEKQTSCT 421
>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate
Query: 1 CTGKQTDC 8
CT K DC
Sbjct: 580 CTNKTEDC 587
>sp|R1A_LIYV9|REPLICASE polyprotein 1a|Lettuce infectious yellows virus (isolate
Query: 1 CTGKQTDC 8
CT K DC
Sbjct: 580 CTNKTEDC 587
67|SequenceR|340|331|HPGQECTGKQ
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 HPGQECTG 8
+PGQ C G
Sbjct: 1305 YPGQGCAG 1312
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 1 HPGQECTG 8
+PGQ C G
Sbjct: 1303 YPGQGCAG 1310
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 HPGQECTG 8
+PGQ C G
Sbjct: 1299 YPGQGCAG 1306
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 HPGQECTG 8
+PGQ C G
Sbjct: 1311 YPGQGCAG 1318
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 HPGQECTG 8
+PGQ C G
Sbjct: 1305 YPGQGCAG 1312
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 1 HPGQECTG 8
+PGQ C G
Sbjct: 1303 YPGQGCAG 1310
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 HPGQECTG 8
+PGQ C G
Sbjct: 1299 YPGQGCAG 1306
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 HPGQECTG 8
+PGQ C G
Sbjct: 1311 YPGQGCAG 1318
>sp|SPIKE_CVPIA|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus
Query: 1 HPGQECTG 8
PGQ C G
Sbjct: 543 QPGQHCPG 550
>sp|SPIKE_CVP67|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus
Query: 1 HPGQECTG 8
PGQ C G
Sbjct: 543 QPGQHCPG 550
>sp|US03_CHV9D|SERINE/THREONINE-PROTEIN kinase US3 homolog|Cercopithecine herpesvirus 9 (strain DHV)
Query: 1 HPGQECTG 8
HPG C G
Sbjct: 172 HPGDVCLG 179
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 HPGQECTG 8
HPG C G
Sbjct: 216 HPGDVCVG 223
>sp|Y112_ABVP|PUTATIVE transmembrane protein ORF112|Acidianus bottle-shaped virus
Query: 1 HPGQECTGK 9
+P Q C GK
Sbjct: 6 YPSQMCPGK 14
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 HPGQECTGK 9
HP C GK
Sbjct: 333 HPNITCAGK 341
>sp|VF213_IIV6|TRANSMEMBRANE protein 213R|Invertebrate iridescent virus 6 (IIV-6)
Query: 2 PGQECTG 8
PG CTG
Sbjct: 423 PGNACTG 429
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 HPGQECTGKQ 10
H ++CTG+Q
Sbjct: 424 HQMKDCTGRQ 433
>sp|POL_SIVCZ|GAG-POL polyprotein|Simian immunodeficiency virus (isolate CPZ
Query: 1 HPGQECTGKQ 10
H ++CTG+Q
Sbjct: 372 HQMKDCTGRQ 381
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 PGQECTG 8
PG++C+G
Sbjct: 174 PGRKCSG 180
68|SequenceR|345|336|MWPVQHPGQE
>sp|DPOL_ADEG1|DNA polymerase|Fowl adenovirus A serotype 1
Query: 1 MWPVQHPGQE 10
+W +HPGQ+
Sbjct: 361 LWQKEHPGQQ 370
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 2 WPVQHPGQE 10
WP+QH +E
Sbjct: 392 WPLQHIQKE 400
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 2 WPVQHPGQE 10
WP+QH +E
Sbjct: 392 WPLQHIQKE 400
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 WPVQHPGQ 9
WPV HP Q
Sbjct: 597 WPVTHPSQ 604
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 1 MWPVQHPGQE 10
+W V HP E
Sbjct: 189 IWGVHHPNDE 198
>sp|HEMA_I80AD|HEMAGGLUTININ A virus (strain A/Gull/Minnesota/945/1980
Query: 1 MWPVQHP 7
MW + HP
Sbjct: 192 MWGIHHP 198
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 1 MWPVQHPGQE 10
+W + HP E
Sbjct: 191 LWGIHHPNDE 200
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 MWPVQHPGQE 10
+W V HP E
Sbjct: 179 IWGVHHPSTE 188
>sp|ARBH_ASFWA|APOPTOSIS regulator Bcl-2 homolog|African swine fever virus (isolate
Query: 2 WPVQHPGQE 10
W + H GQE
Sbjct: 127 WMISHGGQE 135
>sp|ARBH_ASFP4|APOPTOSIS regulator Bcl-2 homolog|African swine fever virus (isolate
Query: 2 WPVQHPGQE 10
W + H GQE
Sbjct: 127 WMISHGGQE 135
>sp|ARBH_ASFM2|APOPTOSIS regulator Bcl-2 homolog|African swine fever virus (isolate
Query: 2 WPVQHPGQE 10
W + H GQE
Sbjct: 127 WMISHGGQE 135
>sp|ARBH_ASFK5|APOPTOSIS regulator Bcl-2 homolog|African swine fever virus (isolate
Query: 2 WPVQHPGQE 10
W + H GQE
Sbjct: 127 WMISHGGQE 135
>sp|ARBH_ASFE4|APOPTOSIS regulator Bcl-2 homolog|African swine fever virus (strain
Query: 2 WPVQHPGQE 10
W + H GQE
Sbjct: 127 WMISHGGQE 135
>sp|ARBH_ASFB7|APOPTOSIS regulator Bcl-2 homolog|African swine fever virus (strain
Query: 2 WPVQHPGQE 10
W + H GQE
Sbjct: 127 WMISHGGQE 135
>sp|HEMA_I84A4|HEMAGGLUTININ A virus (strain A/Gull/Astrakhan/227/1984
Query: 1 MWPVQHP 7
MW + HP
Sbjct: 191 MWGIHHP 197
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 1 MWPVQHPGQE 10
+W V HP E
Sbjct: 189 IWGVHHPNDE 198
>sp|HEMA_I66A1|HEMAGGLUTININ A virus (strain A/Turkey/Wisconsin/1/1966
Query: 1 MWPVQHP 7
MW + HP
Sbjct: 187 MWGIHHP 193
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|YL410_MIMIV|PUTATIVE core protein L410|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 PVQHPGQ 9
PV+HP Q
Sbjct: 596 PVRHPDQ 602
>sp|P21_BYVU|RNA silencing suppressor|Beet yellows virus (isolate Ukraine)
Query: 2 WPVQHPGQ 9
W QHP Q
Sbjct: 61 WMEQHPNQ 68
>sp|HEMA_I88A4|HEMAGGLUTININ A virus (strain A/Herring
Query: 1 MWPVQHPGQE 10
+W + HP E
Sbjct: 189 IWGIHHPNDE 198
>sp|HEMA_I82A1|HEMAGGLUTININ A virus (strain A/Mallard/Astrakhan/263/1982
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 196 LWGVHHPSSD 205
>sp|HEMA_I82A0|HEMAGGLUTININ A virus (strain A/Mallard/Astrakhan/244/1982
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 191 LWGVHHPSSD 200
>sp|HEMA_I77AF|HEMAGGLUTININ A virus (strain A/Gull/Maryland/704/1977
Query: 2 WPVQHPGQ 9
W + HPG+
Sbjct: 247 WSLIHPGE 254
>sp|RIR2_ASFP4|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|African swine fever virus (isolate
Query: 1 MWPVQHP 7
++P+QHP
Sbjct: 14 IFPIQHP 20
>sp|RIR2_ASFB7|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|African swine fever virus (strain
Query: 1 MWPVQHP 7
++P+QHP
Sbjct: 21 IFPIQHP 27
>sp|TGB1_P1AMV|MOVEMENT and silencing protein TGBp1|Plantago asiatica mosaic potexvirus
Query: 3 PVQHPG 8
P+QHPG
Sbjct: 100 PLQHPG 105
>sp|RIR2_ASFWA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|African swine fever virus (isolate
Query: 1 MWPVQHP 7
++P+QHP
Sbjct: 14 IFPIQHP 20
>sp|RIR2_ASFM2|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|African swine fever virus (isolate
Query: 1 MWPVQHP 7
++P+QHP
Sbjct: 14 IFPIQHP 20
>sp|RIR2_ASFK5|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|African swine fever virus (isolate
Query: 1 MWPVQHP 7
++P+QHP
Sbjct: 14 IFPIQHP 20
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|RDRP_SMYEA|RNA replication protein|Strawberry mild yellow edge-associated virus
Query: 2 WPVQHPG 8
WPV PG
Sbjct: 769 WPVLAPG 775
>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA
Query: 1 MWPVQHP 7
MW + HP
Sbjct: 2400 MWQILHP 2406
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 2 WPVQHP 7
W +QHP
Sbjct: 266 WDLQHP 271
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 2 WPVQHP 7
W +QHP
Sbjct: 266 WDLQHP 271
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 WPVQHP 7
W VQHP
Sbjct: 214 WDVQHP 219
69|SequenceR|350|341|APAKEMWPVQ
>sp|YR135_MIMIV|PUTATIVE GMC-type oxidoreductase R135|Acanthamoeba polyphaga mimivirus
Query: 1 APAKEMWPV 9
APA + WP+
Sbjct: 519 APADQQWPI 527
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 APAKEMWPV 9
APA E WP+
Sbjct: 49 APATERWPL 57
>sp|T2C1_PBCVI|TYPE II restriction enzyme CviJI|Paramecium bursaria Chlorella virus
Query: 1 APAKEMWP 8
AP ++WP
Sbjct: 233 APVSKIWP 240
70|SequenceR|355|346|PLSLHAPAKE
>sp|RPOLV_BPN4|VIRION DNA-directed RNA polymerase|Enterobacteria phage N4 (Bacteriophage
Query: 1 PLSLHAPAK 9
P+S++APA+
Sbjct: 1903 PMSIYAPAQ 1911
>sp|NCAP_PEDV7|NUCLEOPROTEIN epidemic diarrhea virus (strain
Query: 1 PLSLHAPAK 9
PLSL+AP +
Sbjct: 15 PLSLYAPLR 23
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LSLHAPAKE 10
L+LH PA+E
Sbjct: 74 LTLHLPAEE 82
>sp|VL1_BPV5|MAJOR capsid protein L1|Bovine papillomavirus type 5
Query: 3 SLHAPAKE 10
+LH PAKE
Sbjct: 84 NLHNPAKE 91
71|SequenceR|360|351|LAQPDPLSLH
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LAQPDPLSLH 10
LA+PDP+ H
Sbjct: 545 LARPDPVFCH 554
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LAQPDPLSLH 10
LA+PDP+ H
Sbjct: 545 LARPDPVFCH 554
>sp|HELI_PSHV1|DNA replication helicase|Psittacid herpesvirus 1 (isolate Amazon
Query: 3 QPDPLSL 9
QPDP SL
Sbjct: 149 QPDPKSL 155
>sp|MYC_FLV|VIRAL myc transforming protein|Feline leukemia virus
Query: 2 AQPDPLSLH 10
A P+PL+LH
Sbjct: 233 ASPEPLALH 241
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 LAQPDPLSL 9
L QPDP S+
Sbjct: 72 LEQPDPTSV 80
>sp|POL2_CRLVP|RNA2 polyprotein|Cherry rasp leaf virus (isolate
Query: 4 PDPLSLH 10
PDP S H
Sbjct: 769 PDPFSFH 775
>sp|YO13_ADEG1|UNCHARACTERIZED protein ORF13|Fowl adenovirus A serotype 1
Query: 3 QPDPLSLH 10
+PDPL LH
Sbjct: 233 KPDPLMLH 240
>sp|VP48_NPVOP|P48 protein|Orgyia pseudotsugata multicapsid polyhedrosis virus
Query: 2 AQPDPLSLH 10
AQPD +LH
Sbjct: 77 AQPDSENLH 85
>sp|CAPSD_AQRVC|INNER capsid protein VP3|Aquareovirus C (isolate Golden
Query: 1 LAQPDPLSL 9
LAQP+P+++
Sbjct: 593 LAQPEPIAI 601
>sp|VF396_IIV6|UNCHARACTERIZED protein 396L|Invertebrate iridescent virus 6 (IIV-6)
Query: 4 PDPLSLH 10
P P+SLH
Sbjct: 279 PTPISLH 285
>sp|CAPSD_AQRVG|INNER capsid protein VP3|Aquareovirus G (isolate American grass
Query: 1 LAQPDPLSLH 10
LAQP+P+ ++
Sbjct: 594 LAQPEPIVIN 603
>sp|VE7_PCPV1|PROTEIN E7|Pygmy chimpanzee papillomavirus type 1
Query: 4 PDPLSLH 10
PDP+ LH
Sbjct: 17 PDPVGLH 23
>sp|VE7_HPV55|PROTEIN E7|Human papillomavirus type 55
Query: 4 PDPLSLH 10
PDP+ LH
Sbjct: 18 PDPVGLH 24
>sp|VE7_HPV6B|PROTEIN E7|Human papillomavirus type 6b
Query: 4 PDPLSLH 10
PDP+ LH
Sbjct: 18 PDPVGLH 24
>sp|VE7_HPV6A|PROTEIN E7|Human papillomavirus type 6a
Query: 4 PDPLSLH 10
PDP+ LH
Sbjct: 18 PDPVGLH 24
>sp|VE7_HPV44|PROTEIN E7|Human papillomavirus 44
Query: 4 PDPLSLH 10
PDP+ LH
Sbjct: 18 PDPVGLH 24
72|SequenceR|365|356|PVDRKLAQPD
>sp|CAPSD_BPCHP|CAPSID protein VP1|Chlamydia phage 1 (Bacteriophage Chp1)
Query: 1 PVDRKLAQPD 10
P+DR LA PD
Sbjct: 558 PIDRALAVPD 567
>sp|SPIK2_ADEG1|FIBER protein 2|Fowl adenovirus A serotype 1
Query: 4 RKLAQPD 10
RKLA PD
Sbjct: 6 RKLADPD 12
73|SequenceR|370|361|SVNDCPVDRK
>sp|VAP_CAMVS|VIRION-ASSOCIATED protein|Cauliflower mosaic virus (strain Strasbourg)
Query: 2 VNDCPVDRK 10
+NDCP +++
Sbjct: 57 INDCPCNKE 65
>sp|VAP_CAMVD|VIRION-ASSOCIATED protein|Cauliflower mosaic virus (strain D/H)
Query: 2 VNDCPVDRK 10
+NDCP +++
Sbjct: 57 INDCPCNKE 65
>sp|VAP_CAMVC|VIRION-ASSOCIATED protein|Cauliflower mosaic virus (strain CM-1841)
Query: 2 VNDCPVDRK 10
+NDCP +++
Sbjct: 57 INDCPCNKE 65
>sp|VAP_CAMVN|VIRION-ASSOCIATED protein|Cauliflower mosaic virus (strain NY8153)
Query: 2 VNDCPVDRK 10
+NDCP +++
Sbjct: 57 INDCPCNKE 65
>sp|VAP_CAMVE|VIRION-ASSOCIATED protein|Cauliflower mosaic virus (strain BBC)
Query: 2 VNDCPVDRK 10
+NDCP +++
Sbjct: 57 INDCPCNKE 65
>sp|VF019_IIV3|PUTATIVE MSV199 domain-containing protein 093L|Invertebrate iridescent virus
Query: 2 VNDCP 6
VNDCP
Sbjct: 108 VNDCP 112
>sp|YVKA_VACCC|UNCHARACTERIZED 9.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SVNDCP 6
S+NDCP
Sbjct: 76 SINDCP 81
>sp|YR818_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R818|Acanthamoeba polyphaga
Query: 3 NDCPVD 8
+DCP+D
Sbjct: 1610 SDCPID 1615
>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)
Query: 2 VNDCPVDRK 10
+ DCP D++
Sbjct: 348 IRDCPKDKQ 356
>sp|VL2_BPV3|MINOR capsid protein L2|Bovine papillomavirus type 3
Query: 4 DCPVDRK 10
DCP+D K
Sbjct: 24 DCPIDIK 30
>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)
Query: 2 VNDCPVDRK 10
+ DCP D++
Sbjct: 348 IRDCPKDKQ 356
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 3 NDCPVDRK 10
N C +DRK
Sbjct: 537 NPCSIDRK 544
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 3 NDCPVDRK 10
N C +DRK
Sbjct: 536 NPCSIDRK 543
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 NDCPVDRK 10
N C +DRK
Sbjct: 529 NPCSIDRK 536
>sp|VL2_BPV4|MINOR capsid protein L2|Bos taurus papillomavirus 4 (Bovine
Query: 4 DCPVDRK 10
DCP+D K
Sbjct: 24 DCPIDIK 30
74|SequenceR|375|366|SSPCSSVNDC
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 CSSVNDC 10
CSSVN C
Sbjct: 1962 CSSVNKC 1968
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 CSSVNDC 10
CSSVN C
Sbjct: 1962 CSSVNKC 1968
>sp|ENV_SIVSP|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate
Query: 1 SSPCSSVNDC 10
S PC +N+C
Sbjct: 155 SDPCIKINNC 164
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 CSSVNDC 10
CSSVN C
Sbjct: 1962 CSSVNRC 1968
>sp|HELIC_BPT3|DNA helicase/primase|Enterobacteria phage T3 (Bacteriophage T3)
Query: 3 PCSSVNDC 10
PC N+C
Sbjct: 233 PCKDANEC 240
>sp|YR311_MIMIV|PUTATIVE RING finger protein R311|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 SSPCSSVND 9
SSP +S+ND
Sbjct: 621 SSPLNSIND 629
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 SSPCSSVNDC 10
+SPC N+C
Sbjct: 140 NSPCIRTNNC 149
>sp|HELIC_BPT7|DNA helicase/primase|Escherichia phage T7 (Bacteriophage T7)
Query: 3 PCSSVNDC 10
PC N+C
Sbjct: 234 PCKDANEC 241
>sp|YL082_MIMIV|UNCHARACTERIZED protein L82|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 CSSVNDC 10
CSS N+C
Sbjct: 18 CSSWNEC 24
>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate
Query: 3 PCSSVNDC 10
PC VN C
Sbjct: 1195 PCMPVNGC 1202
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 SSPCSSVNDC 10
+ PC +N+C
Sbjct: 134 TDPCIQLNNC 143
>sp|ENV_SIVS4|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate
Query: 1 SSPCSSVNDC 10
S+PC N C
Sbjct: 150 SNPCIKNNSC 159
75|SequenceR|380|371|QCCTDSSPCS
>sp|VP39_NPVOP|MAJOR capsid protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 2 CCTDSSPCS 10
C T SPCS
Sbjct: 28 CVTYRSPCS 36
>sp|MCP_NPVAC|MAJOR capsid protein|Autographa californica nuclear polyhedrosis virus
Query: 2 CCTDSSPCS 10
C T SPCS
Sbjct: 29 CITYKSPCS 37
>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus
Query: 5 DSSPCS 10
DSSPC+
Sbjct: 173 DSSPCA 178
>sp|SPAN1_BPP2|PROBABLE spanin, inner membrane subunit|Escherichia phage P2 (Bacteriophage
Query: 3 CTDSSPC 9
CTD+S C
Sbjct: 120 CTDASDC 126
>sp|NS1_AADNV|INITIATOR protein NS1|Aedes albopictus densovirus (isolate Boublik/1994)
Query: 3 CTDSSPC 9
C++ SPC
Sbjct: 20 CSEHSPC 26
>sp|YR135_MIMIV|PUTATIVE GMC-type oxidoreductase R135|Acanthamoeba polyphaga mimivirus
Query: 1 QCCTDSSPC 9
+CC +PC
Sbjct: 5 ECCKCYNPC 13
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 CTDSSPCS 10
CT S PCS
Sbjct: 2282 CTGSIPCS 2289
>sp|PHOSP_TPMV|PHOSPHOPROTEIN paramyxovirus (TPMV)
Query: 2 CCTDSSPCS 10
C TD +PCS
Sbjct: 149 CQTDDAPCS 157
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 CCTDSSPCS 10
C T +PCS
Sbjct: 2355 CWTQITPCS 2363
>sp|VF345_ASFK5|PROTEIN D345L|African swine fever virus (isolate
Query: 2 CCTDSSPCS 10
CCT SP S
Sbjct: 325 CCTKESPLS 333
>sp|V_TPMV|NON-STRUCTURAL protein V|Tupaia paramyxovirus (TPMV)
Query: 2 CCTDSSPCS 10
C TD +PCS
Sbjct: 149 CQTDDAPCS 157
76|SequenceR|385|376|EGSTLQCCTD
>sp|VP1_AQRVG|OUTER capsid protein VP1|Aquareovirus G (isolate American grass
Query: 2 GSTLQCCT 9
G+TLQ CT
Sbjct: 605 GTTLQMCT 612
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 GSTLQCCTD 10
GST +CC D
Sbjct: 1045 GSTFRCCHD 1053
>sp|V018_FOWPN|PUTATIVE ankyrin repeat protein FPV018|Fowlpox virus (strain NVSL) (FPV)
Query: 2 GSTLQCCTD 10
G+ ++CC D
Sbjct: 327 GARIRCCND 335
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 STLQCCT 9
+TL+CCT
Sbjct: 6356 TTLRCCT 6362
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 TLQCCT 9
TL+CCT
Sbjct: 6386 TLKCCT 6391
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 GSTLQCCTD 10
GS+ +CC D
Sbjct: 1042 GSSFKCCHD 1050
>sp|UL87_ELHVK|PROTEIN U58|Elephantid herpesvirus 1 (isolate Asian
Query: 4 TLQCCTD 10
T++CCT+
Sbjct: 265 TVECCTN 271
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 GSTLQCC 8
GST +CC
Sbjct: 1039 GSTFKCC 1045
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 GSTLQCC 8
GST +CC
Sbjct: 1040 GSTFKCC 1046
77|SequenceR|390|381|PCCGWEGSTL
>sp|TUBE2_BPT7|TAIL tubular protein gp12|Escherichia phage T7 (Bacteriophage T7)
Query: 3 CGWEGSTL 10
CGWEG+ L
Sbjct: 781 CGWEGNYL 788
>sp|Y04P_BPT4|UNCHARACTERIZED 39.0 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)
Query: 3 CGWEGSTL 10
CGWEG L
Sbjct: 224 CGWEGYKL 231
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 2 CCGWE 6
CCGW+
Sbjct: 2221 CCGWK 2225
>sp|RPB2_IIV6|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 6
Query: 3 CGWEGSTL 10
CGW G L
Sbjct: 1046 CGWNGKKL 1053
>sp|GLYCO_SYNV|SPIKE glycoprotein|Sonchus yellow net virus (SYNV)
Query: 1 PCCGWE 6
P CGWE
Sbjct: 240 PPCGWE 245
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 2 CCGW 5
CCGW
Sbjct: 14 CCGW 17
>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)
Query: 1 PCCGWEGST 9
P CGWE +
Sbjct: 2830 PACGWEKQS 2838
>sp|BPD_BP186|PROBABLE baseplate hub protein|Escherichia phage 186 (Bacteriophage 186)
Query: 4 GWEGSTL 10
GW+GS L
Sbjct: 75 GWQGSAL 81
>sp|DPOL_FRG3G|PUTATIVE DNA polymerase 060R|Frog virus 3 (isolate Goorha)
Query: 1 PCCGW 5
P CGW
Sbjct: 122 PTCGW 126
>sp|VP03_ALHV1|PROBABLE tegument protein antigen 3|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 PCCGW 5
P CGW
Sbjct: 305 PMCGW 309
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 PCCGW 5
P CGW
Sbjct: 2855 PLCGW 2859
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 2 CCGWEG 7
C GW G
Sbjct: 309 CAGWSG 314
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 2 CCGWEG 7
C GW G
Sbjct: 309 CAGWSG 314
>sp|MVP_TUMVQ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Quebec)
Query: 2 CCGWEG 7
C GW G
Sbjct: 309 CAGWSG 314
>sp|MVP_TUMVJ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Japanese)
Query: 2 CCGWEG 7
C GW G
Sbjct: 309 CAGWSG 314
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PCCGW 5
PC GW
Sbjct: 13 PCYGW 17
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 1 PCCGW 5
PC GW
Sbjct: 13 PCYGW 17
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CCGW 5
CCGW
Sbjct: 343 CCGW 346
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 CGWE 6
CGWE
Sbjct: 1491 CGWE 1494
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 CGWE 6
CGWE
Sbjct: 1491 CGWE 1494
>sp|BXDN_CBDP|NON-TOXIC nonhemagglutinin type D|Clostridium botulinum D phage (Clostridium
Query: 3 CGWE 6
CGWE
Sbjct: 927 CGWE 930
>sp|BXCN_CBCP|NON-TOXIC nonhemagglutinin type C|Clostridium botulinum C phage (Clostridium
Query: 3 CGWE 6
CGWE
Sbjct: 927 CGWE 930
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CCGW 5
CCGW
Sbjct: 343 CCGW 346
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CCGW 5
CCGW
Sbjct: 343 CCGW 346
>sp|YR328_MIMIV|UNCHARACTERIZED protein R328|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 CCGWEG 7
CC W G
Sbjct: 235 CCIWNG 240
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CCGW 5
CCGW
Sbjct: 343 CCGW 346
>sp|US03_GAHVM|PROTEIN kinase US3 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 2 CCGWEGS 8
C GW G+
Sbjct: 252 CYGWSGT 258
>sp|US03_GAHVG|SERINE/THREONINE-PROTEIN kinase US3 homolog|Gallid herpesvirus 2 (strain GA)
Query: 2 CCGWEGS 8
C GW G+
Sbjct: 252 CYGWSGT 258
>sp|POLN_ELV|NON-STRUCTURAL replication polyprotein|Erysimum latent virus (ELV)
Query: 3 CGWEGSTL 10
CGW T+
Sbjct: 1053 CGWNAVTI 1060
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GWEGSTL 10
GW+G TL
Sbjct: 138 GWDGETL 144
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GWEGSTL 10
GW+G TL
Sbjct: 138 GWDGETL 144
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CGWEG 7
CGWEG
Sbjct: 196 CGWEG 200
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CGWEG 7
CGWEG
Sbjct: 196 CGWEG 200
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CGWEG 7
CGW G
Sbjct: 84 CGWNG 88
>sp|GP_PHV|ENVELOPMENT polyprotein|Prospect Hill virus (PHV)
Query: 1 PCCGWEGSTL 10
P C ++G+TL
Sbjct: 907 PTCEYDGNTL 916
78|SequenceR|395|386|VAEPIPCCGW
>sp|RDRP_ACLSA|RNA-DIRECTED RNA polymerase|Apple chlorotic leaf spot virus
Query: 1 VAEPIPC 7
+AEP+PC
Sbjct: 656 IAEPVPC 662
>sp|Y149_NPVAC|UNCHARACTERIZED 12.4 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 4 PIPCC 8
P+PCC
Sbjct: 92 PLPCC 96
>sp|ENV_EIAVW|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 5 IPCCGW 10
IPCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV1|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 5 IPCCGW 10
IPCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAVY|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 5 IPCCGW 10
IPCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAVC|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 5 IPCCGW 10
IPCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV9|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 5 IPCCGW 10
IPCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV3|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 5 IPCCGW 10
IPCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV2|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 5 IPCCGW 10
IPCCG+
Sbjct: 789 IPCCGF 794
>sp|ENV_EIAV5|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 5 IPCCGW 10
IPCCG+
Sbjct: 790 IPCCGF 795
>sp|ENV_NPVLD|ENVELOPE fusion protein|Lymantria dispar multicapsid nuclear polyhedrosis
Query: 4 PIPCCG 9
PIP CG
Sbjct: 328 PIPLCG 333
>sp|VP91_NPVEP|CAPSID-ASSOCIATED protein Vp91|Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)
Query: 2 AEPIPCCG 9
AEPI C G
Sbjct: 473 AEPIDCLG 480
>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)
Query: 2 AEPIPCCGW 10
++P+P C W
Sbjct: 1542 SKPVPFCLW 1550
>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 VAEPIPCCG 9
+A P+P CG
Sbjct: 409 IAPPVPTCG 417
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 3 EPIPCCGW 10
EP CC W
Sbjct: 219 EPTGCCVW 226
>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 VAEPIPCCGW 10
+AE P C W
Sbjct: 1167 IAEGTPVCDW 1176
>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 VAEPIPCCGW 10
+AE P C W
Sbjct: 1167 IAEGTPVCDW 1176
>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 VAEPIPCCGW 10
+AE P C W
Sbjct: 1167 IAEGTPVCDW 1176
>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 VAEPIPCCGW 10
+AE P C W
Sbjct: 1167 IAEGTPVCDW 1176
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 5 IPCCG 9
+PCCG
Sbjct: 4686 VPCCG 4690
>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 VAEPIPCCGW 10
+AE P C W
Sbjct: 1167 IAEGTPVCDW 1176
>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 VAEPIPCCG 9
VA P+P CG
Sbjct: 409 VALPVPTCG 417
>sp|VP91_NPVCF|CAPSID-ASSOCIATED protein Vp91|Choristoneura fumiferana nuclear polyhedrosis virus
Query: 2 AEPIPCCG 9
AEPI C G
Sbjct: 473 AEPIDCFG 480
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 6 PCCG 9
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 6 PCCG 9
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 6 PCCG 9
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 6 PCCG 9
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 6 PCCG 9
PCCG
Sbjct: 208 PCCG 211
>sp|GL_EHV2|ENVELOPE glycoprotein L|Equine herpesvirus 2 (strain 86/87)
Query: 4 PIPCC 8
P+PCC
Sbjct: 27 PMPCC 31
>sp|1ATF_PRRSS|TRUNCATED polyprotein 1aTF|Porcine reproductive and respiratory syndrome
Query: 1 VAEPIPCCG 9
+A P+P CG
Sbjct: 409 IAPPVPTCG 417
>sp|Y124_OSHVF|UNCHARACTERIZED protein ORF124|Ostreid herpesvirus 1 (isolate France)
Query: 6 PCCG 9
PCCG
Sbjct: 163 PCCG 166
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 PCCGW 10
PC GW
Sbjct: 13 PCYGW 17
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 6 PCCGW 10
PC GW
Sbjct: 13 PCYGW 17
>sp|GPB_BPPM2|UNCHARACTERIZED protein Gp-b*|Pseudoalteromonas phage PM2 (Bacteriophage PM2)
Query: 1 VAEPIPCC 8
+ P PCC
Sbjct: 15 ILSPFPCC 22
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 PIPCCGW 10
P+P C W
Sbjct: 319 PVPSCWW 325
>sp|RPOTF_PRRSL|REPLICASE polyprotein 1TF|Porcine reproductive and respiratory syndrome
Query: 1 VAEPIPCCG 9
VA P+P CG
Sbjct: 409 VALPVPTCG 417
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 PIPCCGW 10
P+P C W
Sbjct: 319 PVPSCWW 325
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 3 EPIPCCGW 10
EPI C W
Sbjct: 346 EPIHCVNW 353
>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma
Query: 1 VAEPIPCCGW 10
VAE P C W
Sbjct: 185 VAEVAPQCFW 194
>sp|NS5B_IBVK|HOST translation inhibitor 5b|Avian infectious bronchitis virus
Query: 2 AEPIPCC 8
AEP P C
Sbjct: 37 AEPCPAC 43
>sp|NS5B_IBVB|HOST translation inhibitor 5b|Avian infectious bronchitis virus
Query: 2 AEPIPCC 8
AEP P C
Sbjct: 37 AEPCPAC 43
79|SequenceR|400|391|HDSCCVAEPI
>sp|VG67_ICHVA|UNCHARACTERIZED protein ORF67|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 HDSCCVAEP 9
H++ CV EP
Sbjct: 97 HETTCVTEP 105
>sp|P4H_MIMIV|PUTATIVE prolyl 4-hydroxylase|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 HDSCC 5
HDSCC
Sbjct: 147 HDSCC 151
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 1 HDSCC 5
HDSCC
Sbjct: 5040 HDSCC 5044
Query: 3 SCCVAE 8
SCCVAE
Sbjct: 1571 SCCVAE 1576
>sp|R1AB_CVRSD|REPLICASE polyprotein 1ab|Rat coronavirus (strain 681) (RCV-SDAV)
Query: 1 HDSCC 5
HDSCC
Sbjct: 137 HDSCC 141
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 HDSCC 5
HDSCC
Sbjct: 5098 HDSCC 5102
Query: 3 SCCVAE 8
SCCVAE
Sbjct: 1623 SCCVAE 1628
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 HDSCC 5
HDSCC
Sbjct: 5092 HDSCC 5096
Query: 3 SCCVAE 8
SCCVAE
Sbjct: 1624 SCCVAE 1629
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 DSCCVAE 8
D+CCV E
Sbjct: 1426 DNCCVKE 1432
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 DSCCVAE 8
D+CCV E
Sbjct: 1426 DNCCVKE 1432
>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)
Query: 3 SCCVAE 8
SCCVAE
Sbjct: 1571 SCCVAE 1576
>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 3 SCCVAE 8
SCCVAE
Sbjct: 1623 SCCVAE 1628
>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)
Query: 3 SCCVAE 8
SCCVAE
Sbjct: 1624 SCCVAE 1629
>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum
Query: 2 DSCCVAEPI 10
+SCCV + I
Sbjct: 1591 NSCCVTDAI 1599
>sp|L_OLVVA|RNA-DIRECTED RNA polymerase L|Oliveros mammarenavirus (isolate
Query: 4 CCVAEPI 10
CC EP+
Sbjct: 450 CCALEPV 456
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 1 HDSCCVAEPI 10
HD CC ++ +
Sbjct: 1807 HDGCCCSKRV 1816
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 1 HDSCCVAEPI 10
HD CC ++ +
Sbjct: 1807 HDGCCCSKRV 1816
>sp|A11_FOWPN|PROTEIN A11 homolog|Fowlpox virus (strain NVSL) (FPV)
Query: 1 HDSCCVAE 8
HD C V+E
Sbjct: 68 HDRCIVSE 75
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 DSCCVAE 8
D CC+ E
Sbjct: 1369 DECCIKE 1375
>sp|CHIT_NPVAC|CHITINASE californica nuclear polyhedrosis virus
Query: 2 DSCCVAEPI 10
D C V++P+
Sbjct: 109 DGCSVSDPV 117
>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)
Query: 1 HDSCCVAEPI 10
HD CC+ I
Sbjct: 687 HDICCLVSCI 696
>sp|VG67_BPML5|GENE 67 protein|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 1 HDSCCVAE 8
HDSCC E
Sbjct: 16 HDSCCGFE 23
80|SequenceR|405|396|PCCHQHDSCC
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCW|EARLY transcription factor 82 kDa|Vaccinia virus (strain Western Reserve)
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|HEPA_EHV1V|DNA helicase/primase complex-associated protein|Equine herpesvirus 1
Query: 1 PCCHQHDSCC 10
PC + D CC
Sbjct: 273 PCGEEVDYCC 282
>sp|HEPA_EHV1B|DNA helicase/primase complex-associated protein|Equine herpesvirus 1
Query: 1 PCCHQHDSCC 10
PC + D CC
Sbjct: 273 PCGEEVDYCC 282
>sp|1A_TOBSV|REPLICATION protein 1a|Tobacco streak virus (strain WC)
Query: 2 CCHQHDSC 9
CCH+ + C
Sbjct: 178 CCHKFEEC 185
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 5 QHDSCC 10
+HDSCC
Sbjct: 5039 KHDSCC 5044
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 5 QHDSCC 10
+HDSCC
Sbjct: 5097 KHDSCC 5102
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 5 QHDSCC 10
+HDSCC
Sbjct: 5091 KHDSCC 5096
>sp|R1AB_CVRSD|REPLICASE polyprotein 1ab|Rat coronavirus (strain 681) (RCV-SDAV)
Query: 5 QHDSCC 10
+HDSCC
Sbjct: 136 KHDSCC 141
>sp|YR106_MIMIV|UNCHARACTERIZED protein R106|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 PCCHQHD 7
PC HQ D
Sbjct: 63 PCYHQKD 69
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 3 CHQHDS 8
CHQH S
Sbjct: 6 CHQHAS 11
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 3 CHQHDS 8
CHQH S
Sbjct: 6 CHQHAS 11
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 3 CHQHDS 8
CHQH S
Sbjct: 6 CHQHAS 11
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 3 CHQHDS 8
CHQH S
Sbjct: 6 CHQHAS 11
>sp|YL264_MIMIV|UNCHARACTERIZED WD repeat-containing protein L264|Acanthamoeba polyphaga mimivirus
Query: 2 CCHQHDSCC 10
CC +SCC
Sbjct: 421 CCANKNSCC 429
>sp|UBC4_MIMIV|PROBABLE bifunctional E2/E3 enzyme R795|Acanthamoeba polyphaga mimivirus
Query: 2 CCHQHDSCC 10
C H +CC
Sbjct: 105 CSHSFHACC 113
>sp|P4H_MIMIV|PUTATIVE prolyl 4-hydroxylase|Acanthamoeba polyphaga mimivirus (APMV)
Query: 5 QHDSCC 10
HDSCC
Sbjct: 146 HHDSCC 151
>sp|US10_PSHV1|VIRION protein US10 homolog|Psittacid herpesvirus 1 (isolate Amazon
Query: 2 CCHQHDSCC 10
CC HDS C
Sbjct: 251 CCLWHDSPC 259
>sp|RPO2_MIMIV|DNA-DIRECTED RNA polymerase subunit 2|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 CHQHDSC 9
CH DSC
Sbjct: 1130 CHVCDSC 1136
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 CHQHDSC 9
C Q+DSC
Sbjct: 145 CIQNDSC 151
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 6 HDSCC 10
HD CC
Sbjct: 1807 HDGCC 1811
>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 CCHQHDS 8
CCHQ+ +
Sbjct: 621 CCHQNKT 627
>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 CCHQHDS 8
CCHQ+ +
Sbjct: 621 CCHQNKT 627
>sp|1A_PZSVT|REPLICATION protein 1a|Pelargonium zonate spot virus (isolate
Query: 2 CCHQ 5
CCHQ
Sbjct: 948 CCHQ 951
>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 3 CHQHD 7
CH HD
Sbjct: 2159 CHNHD 2163
>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 3 CHQHD 7
CH HD
Sbjct: 2159 CHNHD 2163
81|SequenceR|410|401|CTYGQPCCHQ
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 1 CTYGQP 6
CTYG+P
Sbjct: 1715 CTYGEP 1720
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 1 CTYGQP 6
CTYG+P
Sbjct: 1715 CTYGEP 1720
>sp|GTA_NPVOP|PROBABLE global transactivator|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 CTYGQPCCH 9
C Q CCH
Sbjct: 298 CRLRQVCCH 306
>sp|CAPSD_BPS13|CAPSID protein F|Enterobacteria phage S13 (Bacteriophage S13)
Query: 3 YGQPCCH 9
YG CCH
Sbjct: 159 YGFRCCH 165
>sp|CAPSD_BPPHS|CAPSID protein F|Enterobacteria phage phiX174 (Isolate Sanger)
Query: 3 YGQPCCH 9
YG CCH
Sbjct: 159 YGFRCCH 165
>sp|CAPSD_BPPHK|CAPSID protein F|Enterobacteria phage phiK (Bacteriophage phi-K)
Query: 3 YGQPCCH 9
YG CCH
Sbjct: 159 YGFRCCH 165
>sp|VF295_IIV3|UNCHARACTERIZED protein 016R|Invertebrate iridescent virus 3 (IIV-3)
Query: 6 PCCHQ 10
PCC+Q
Sbjct: 530 PCCYQ 534
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YGQPCCH 9
+ PCCH
Sbjct: 24 WAYPCCH 30
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 YGQPCCH 9
+ PCCH
Sbjct: 24 WAYPCCH 30
>sp|NCAP_SENDH|NUCLEOPROTEIN virus (strain Harris) (SeV)
Query: 2 TYGQPCC 8
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_SENDF|NUCLEOPROTEIN virus (strain Fushimi) (SeV)
Query: 2 TYGQPCC 8
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_SENDE|NUCLEOPROTEIN virus (strain Enders) (SeV)
Query: 2 TYGQPCC 8
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 TYGQPCC 8
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 TYGQPCC 8
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 2 TYGQPCC 8
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 YGQPCCH 9
+ PCCH
Sbjct: 24 WAYPCCH 30
>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)
Query: 1 CTYGQPCCHQ 10
C Y Q C HQ
Sbjct: 421 CYYMQFCQHQ 430
>sp|VG54_ICHVA|UNCHARACTERIZED protein ORF54|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 CTYGQP 6
CT GQP
Sbjct: 416 CTLGQP 421
>sp|PA_I79A7|POLYMERASE acidic protein|Influenza A virus (strain A/Grey
Query: 4 GQPCCHQ 10
G PCC +
Sbjct: 273 GPPCCQR 279
>sp|RDRP_PMVK|RNA-DIRECTED RNA polymerase|Panicum mosaic virus (strain United
Query: 1 CTYGQPC 7
C Y PC
Sbjct: 651 CKYSNPC 657
>sp|POLN_AHEV|NON-STRUCTURAL polyprotein pORF1|Avian hepatitis E virus (isolate
Query: 1 CTYGQPC 7
CT QPC
Sbjct: 266 CTATQPC 272
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CTYGQPCCH 9
C Y Q CH
Sbjct: 169 CEYPQTICH 177
>sp|P32_MCMVK|UNCHARACTERIZED protein p32|Maize chlorotic mottle virus (isolate
Query: 1 CTYGQP 6
CTYG P
Sbjct: 5 CTYGDP 10
82|SequenceR|415|406|QGEAVCTYGQ
>sp|015R_FRG3G|UNCHARACTERIZED protein 015R|Frog virus 3 (isolate Goorha)
Query: 2 GEAVCTYG 9
GEA+ TYG
Sbjct: 274 GEALVTYG 281
>sp|VF022_IIV3|PUTATIVE helicase 087L|Invertebrate iridescent virus 3 (IIV-3)
Query: 5 VCTYGQ 10
VCT+GQ
Sbjct: 128 VCTWGQ 133
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 QGEAVCTY 8
QGE +CT+
Sbjct: 664 QGEDICTW 671
>sp|TBP_ASFWA|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate
Query: 5 VCTYG 9
VCTYG
Sbjct: 21 VCTYG 25
>sp|TBP_ASFP4|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate
Query: 5 VCTYG 9
VCTYG
Sbjct: 21 VCTYG 25
>sp|TBP_ASFM2|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate
Query: 5 VCTYG 9
VCTYG
Sbjct: 21 VCTYG 25
>sp|TBP_ASFK5|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate
Query: 5 VCTYG 9
VCTYG
Sbjct: 21 VCTYG 25
>sp|TBP_ASFB7|PUTATIVE TATA-binding protein pB263R|African swine fever virus (strain
Query: 5 VCTYG 9
VCTYG
Sbjct: 21 VCTYG 25
83|SequenceR|420|411|SGRQCQGEAV
>sp|YL138_MIMIV|UNCHARACTERIZED protein L138|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 SGRQCQGEAV 10
SG+QC GE V
Sbjct: 427 SGKQCIGELV 436
>sp|GLYC_PIRVV|PRE-GLYCOPROTEIN polyprotein GP complex|Pirital mammarenavirus (isolate
Query: 1 SGRQCQGE 8
+GR C GE
Sbjct: 53 AGRSCDGE 60
>sp|POL_EIAVY|POL polyprotein|Equine infectious anemia virus (strain
Query: 2 GRQCQGEA 9
G QCQGE
Sbjct: 61 GIQCQGEG 68
>sp|POL_EIAVC|POL polyprotein|Equine infectious anemia virus (isolate
Query: 2 GRQCQGEA 9
G QCQGE
Sbjct: 61 GIQCQGEG 68
>sp|POL_EIAV9|POL polyprotein|Equine infectious anemia virus (isolate
Query: 2 GRQCQGEA 9
G QCQGE
Sbjct: 61 GIQCQGEG 68
>sp|SPIKE_BRV1|SPIKE glycoprotein|Breda virus 1 (BRV-1)
Query: 3 RQCQGEA 9
+QC+GEA
Sbjct: 949 QQCRGEA 955
>sp|VF184_IIV6|PUTATIVE helicase 184R|Invertebrate iridescent virus 6 (IIV-6)
Query: 1 SGRQCQGEAV 10
+GR C+ EA+
Sbjct: 340 TGRDCEEEAL 349
>sp|Y017_HVAVE|UNCHARACTERIZED protein ORF17|Heliothis virescens ascovirus 3e (HvAV-3e)
Query: 2 GRQCQGEAV 10
G+QC G+ V
Sbjct: 51 GKQCYGDCV 59
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 SGRQCQGEAV 10
S +QC+GE V
Sbjct: 1147 SYQQCRGERV 1156
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 SGRQCQGEAV 10
S +QC+GE V
Sbjct: 1148 SYQQCRGERV 1157
>sp|ENV_VILV|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514)
Query: 2 GRQCQGEAV 10
G QCQ E V
Sbjct: 105 GNQCQAEEV 113
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 SGRQCQGEAV 10
S +QC+GE V
Sbjct: 1148 SYQQCRGERV 1157
>sp|VG11_ICHVA|PUTATIVE zinc-binding protein ORF11|Ictalurid herpesvirus 1 (strain
Query: 5 CQGEAV 10
CQGEAV
Sbjct: 28 CQGEAV 33
>sp|ENV_VILV2|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514
Query: 2 GRQCQGEAV 10
G QCQ E V
Sbjct: 105 GNQCQAEEV 113
>sp|ENV_VILV1|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514
Query: 2 GRQCQGEAV 10
G QCQ E V
Sbjct: 105 GNQCQAEEV 113
>sp|ENV_VILVK|ENVELOPE glycoprotein gp160|Maedi visna virus (strain KV1772)
Query: 2 GRQCQGEAV 10
G QCQ E V
Sbjct: 105 GNQCQAEEV 113
84|SequenceR|425|416|GAVIESGRQC
>sp|V006_FOWPN|UNCHARACTERIZED protein FPV006/FPV255|Fowlpox virus (strain NVSL) (FPV)
Query: 4 IESGRQC 10
+ESGR+C
Sbjct: 177 VESGRKC 183
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 1 GAVIESGR 8
G V+ESGR
Sbjct: 93 GVVVESGR 100
>sp|VF232_IIV3|PUTATIVE ubiquitin thioesterase 232R|Invertebrate iridescent virus 3
Query: 3 VIESGRQC 10
++E G+QC
Sbjct: 20 IVELGKQC 27
85|SequenceR|430|421|PMKELGAVIE
>sp|HBEAG_WMHBV|EXTERNAL core antigen|Woolly monkey hepatitis B virus
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 17 PYKEFGATVE 26
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 17 PYKEFGATVE 26
>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 17 PYKEFGATVE 26
>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|CAPSD_WMHBV|CAPSID protein|Woolly monkey hepatitis B virus
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|HBEAG_HBVGO|EXTERNAL core antigen|Gorilla hepatitis B virus (isolate
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVD3|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVD6|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVCP|CAPSID protein|Chimpanzee hepatitis B virus (isolate
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVGO|CAPSID protein|Gorilla hepatitis B virus (isolate
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|CAPSD_HBVF6|CAPSID protein|Hepatitis B virus genotype F2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|HBEAG_HBVGB|EXTERNAL core antigen|Gibbon hepatitis B virus subtype
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 181 PYKEFGASVE 190
>sp|CAPSD_HBVGB|CAPSID protein|Gibbon hepatitis B virus subtype
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 1 PMKELGAV 8
PM +LGA+
Sbjct: 659 PMSQLGAI 666
>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 1 PMKELGAV 8
PM +LGA+
Sbjct: 659 PMSQLGAI 666
>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 1 PMKELGAV 8
PM +LGA+
Sbjct: 659 PMSQLGAI 666
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 1 PMKELGAV 8
PM +LGA+
Sbjct: 659 PMSQLGAI 666
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 1 PMKELGAV 8
PM +LGA+
Sbjct: 659 PMSQLGAI 666
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 1 PMKELGAV 8
PM +LGA+
Sbjct: 659 PMSQLGAI 666
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA ++
Sbjct: 34 PYKEFGATVQ 43
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA ++
Sbjct: 5 PYKEFGATVQ 14
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
86|SequenceR|435|426|SARRAPMKEL
***** No hits found ******
87|SequenceR|440|431|RPHSLSARRA
>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)
Query: 3 HSLSARRA 10
HSL+AR+A
Sbjct: 159 HSLAARKA 166
>sp|NS1A_TASV1|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 1 (TAstV-1)
Query: 3 HSLSARRA 10
HSL+AR+A
Sbjct: 159 HSLAARKA 166
88|SequenceR|445|436|DCGIDRPHSL
>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)
Query: 1 DCGIDRPH 8
DC ID PH
Sbjct: 1330 DCTIDEPH 1337
>sp|L_SHRV|RNA-DIRECTED RNA polymerase L|Snakehead rhabdovirus (SHRV)
Query: 1 DCGIDRPHS 9
D GID PH+
Sbjct: 631 DLGIDAPHT 639
>sp|CAPSH_ADEP3|HEXON protein|Porcine adenovirus A serotype 3
Query: 2 CGIDRPH 8
CG+ +PH
Sbjct: 913 CGVHQPH 919
>sp|OE27_NPVOP|OCCLUSION-DERIVED virus envelope protein E27|Orgyia pseudotsugata multicapsid
Query: 2 CGIDRP 7
C IDRP
Sbjct: 134 CAIDRP 139
>sp|TERM_BPPH2|PRIMER terminal protein|Bacillus phage phi29 (Bacteriophage phi-29)
Query: 3 GIDRPHSL 10
GI+RPH
Sbjct: 141 GINRPHDF 148
>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 DCGIDRPHSL 10
DC +RPH++
Sbjct: 3797 DCVRERPHAI 3806
>sp|NS1A_TASV1|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 1 (TAstV-1)
Query: 2 CGIDRPHS 9
CG RPH+
Sbjct: 1036 CGETRPHN 1043
>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)
Query: 2 CGIDRPHS 9
CG RPH+
Sbjct: 1036 CGETRPHN 1043
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 CGIDRPHS 9
CG+ PHS
Sbjct: 2512 CGLTPPHS 2519
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 2 CGIDRPH 8
C IDR H
Sbjct: 538 CSIDRKH 544
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 CGIDRPHS 9
CG+ PHS
Sbjct: 2512 CGLTPPHS 2519
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 2 CGIDRPH 8
C IDR H
Sbjct: 531 CSIDRKH 537
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 2 CGIDRPH 8
C IDR H
Sbjct: 539 CSIDRKH 545
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DCGIDR 6
+CG+DR
Sbjct: 3137 ECGVDR 3142
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DCGIDR 6
+CG+DR
Sbjct: 3137 ECGVDR 3142
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DCGIDR 6
+CG+DR
Sbjct: 3137 ECGVDR 3142
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DCGIDR 6
+CG+DR
Sbjct: 3137 ECGVDR 3142
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DCGIDR 6
+CG+DR
Sbjct: 3137 ECGVDR 3142
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 1 DCGIDRPHSL 10
DC D PH L
Sbjct: 176 DCDYDEPHHL 185
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 2 CGIDRPHS 9
CG+D HS
Sbjct: 246 CGVDFTHS 253
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 2 CGIDRPHS 9
CG+D HS
Sbjct: 246 CGVDFTHS 253
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 DCGIDRPHS 9
DCG PHS
Sbjct: 609 DCGGYLPHS 617
89|SequenceR|450|441|CSTHQDCGID
>sp|VP5_LBVAV|PROTEIN 5|Lettuce big-vein associated virus (isolate
Query: 1 CSTHQDCGI 9
CS+H++C I
Sbjct: 296 CSSHRECWI 304
>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 2 STHQDCGI 9
+TH DCG+
Sbjct: 1207 TTHGDCGL 1214
>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 2 STHQDCGI 9
+TH DCG+
Sbjct: 1207 TTHGDCGL 1214
>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 2 STHQDCGI 9
+TH DCG+
Sbjct: 1207 TTHGDCGL 1214
>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 2 STHQDCGI 9
+TH DCG+
Sbjct: 1207 TTHGDCGL 1214
>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 2 STHQDCGI 9
+TH DCG+
Sbjct: 1207 TTHGDCGL 1214
>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus
Query: 2 STHQDCGI 9
+TH DCG+
Sbjct: 1200 TTHGDCGL 1207
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 4 HQDCGID 10
H+DC ID
Sbjct: 751 HRDCRID 757
>sp|DPOL_NPVLD|DNA polymerase|Lymantria dispar multicapsid nuclear polyhedrosis
Query: 1 CSTHQDC 7
CST Q C
Sbjct: 520 CSTRQSC 526
>sp|Y119_NPVOP|UNCHARACTERIZED 59.0 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 CSTHQDC 7
C TH DC
Sbjct: 69 CDTHADC 75
>sp|FUS_SENDH|FUSION glycoprotein F0|Sendai virus (strain Harris) (SeV)
Query: 3 THQDCGI 9
TH +CG+
Sbjct: 420 THDNCGL 426
>sp|002R_IIV3|UNCHARACTERIZED protein 002R|Invertebrate iridescent virus 3 (IIV-3)
Query: 2 STHQDCGID 10
+TH D G+D
Sbjct: 171 NTHGDLGLD 179
>sp|FUS_SENDO|FUSION glycoprotein F0|Sendai virus (strain Ohita) (SeV)
Query: 3 THQDCGI 9
TH +CG+
Sbjct: 420 THDNCGL 426
>sp|FUS_SENDA|FUSION glycoprotein F0|Sendai virus (strain Hamamatsu) (SeV)
Query: 3 THQDCGI 9
TH +CG+
Sbjct: 420 THDNCGL 426
>sp|VLTF1_VACCW|LATE transcription factor 1|Vaccinia virus (strain Western Reserve)
Query: 1 CSTHQDCGID 10
CS H D ID
Sbjct: 79 CSFHNDAIID 88
>sp|VLTF1_VACCC|LATE transcription factor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CSTHQDCGID 10
CS H D ID
Sbjct: 79 CSFHNDAIID 88
>sp|FUS_SENDZ|FUSION glycoprotein F0|Sendai virus (strain Z) (SeV)
Query: 3 THQDCGI 9
TH +CG+
Sbjct: 420 THDNCGL 426
>sp|FUS_SENDF|FUSION glycoprotein F0|Sendai virus (strain Fushimi) (SeV)
Query: 3 THQDCGI 9
TH +CG+
Sbjct: 420 THDNCGL 426
>sp|VLTF1_VAR67|LATE transcription factor 1|Variola virus (isolate
Query: 1 CSTHQDCGID 10
CS H D ID
Sbjct: 79 CSFHNDAIID 88
>sp|VLTF1_VACCA|LATE transcription factor 1|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CSTHQDCGID 10
CS H D ID
Sbjct: 79 CSFHNDAIID 88
90|SequenceR|455|446|TQGVPCSTHQ
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 TQGVPCSTHQ 10
T GVP THQ
Sbjct: 764 TSGVPAITHQ 773
>sp|TERS_BPP21|TERMINASE, small subunit|Enterobacteria phage P21 (Bacteriophage 21)
Query: 1 TQGVPCST 8
+QG+PC++
Sbjct: 24 SQGLPCAS 31
>sp|VF467_IIV3|UNCHARACTERIZED protein 061R|Invertebrate iridescent virus 3 (IIV-3)
Query: 3 GVPCST 8
G+PCST
Sbjct: 22 GLPCST 27
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 3 GVPCSTHQ 10
GVP +TH+
Sbjct: 6296 GVPVNTHE 6303
>sp|P2_BPPRD|ADSORPTION protein P2|Enterobacteria phage PRD1 (Bacteriophage PRD1)
Query: 4 VPCSTH 9
+PC TH
Sbjct: 575 IPCQTH 580
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 4 VPCSTHQ 10
VPCST Q
Sbjct: 1049 VPCSTSQ 1055
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 1 TQGVPCSTH 9
T G+P STH
Sbjct: 445 TTGLPSSTH 453
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TQGVPCSTH 9
T G+P STH
Sbjct: 445 TTGLPSSTH 453
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TQGVPCSTH 9
T G+P STH
Sbjct: 445 TTGLPSSTH 453
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TQGVPCSTH 9
T G+P STH
Sbjct: 445 TTGLPSSTH 453
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 2 QGVPCS 7
QGVPC+
Sbjct: 197 QGVPCN 202
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 4 VPCSTHQ 10
VPC+T+Q
Sbjct: 483 VPCTTYQ 489
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 4 VPCSTHQ 10
VPC+T+Q
Sbjct: 483 VPCTTYQ 489
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 TQGVPCSTHQ 10
T G P THQ
Sbjct: 764 TAGAPAITHQ 773
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 TQGVPCSTHQ 10
T G P THQ
Sbjct: 764 TAGAPAITHQ 773
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 TQGVPCST 8
T GVPC T
Sbjct: 818 TVGVPCKT 825
91|SequenceR|460|451|LSPCCTQGVP
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 LSPCCTQGVP 10
LS CCT+ VP
Sbjct: 1373 LSKCCTRHVP 1382
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 LSPCCTQGVP 10
LS CCT+ VP
Sbjct: 1373 LSKCCTRHVP 1382
>sp|ENLYS_METM2|PSEUDOMUREIN endoisopeptidase|Methanobacterium phage psiM2 (PsiM2)
Query: 2 SPCCTQGV 9
+PCC++G+
Sbjct: 285 APCCSRGI 292
>sp|ENLYS_BPM10|PSEUDOMUREIN endoisopeptidase PeiW|Methanothermobacter phage psiM100
Query: 3 PCCTQG 8
PCCT G
Sbjct: 264 PCCTAG 269
>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)
Query: 2 SPCCTQGV 9
PCCT GV
Sbjct: 569 DPCCTAGV 576
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 4 CCTQGV 9
CCT+G+
Sbjct: 265 CCTRGI 270
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 4 CCTQGV 9
CCT+G+
Sbjct: 274 CCTRGI 279
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 4 CCTQGV 9
CCT+G+
Sbjct: 274 CCTRGI 279
>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)
Query: 1 LSPCCTQGVP 10
L+ CC G P
Sbjct: 802 LTSCCRDGEP 811
>sp|MCP_EHV1V|MAJOR capsid protein|Equine herpesvirus 1 (strain V592)
Query: 4 CCTQGV 9
CCT GV
Sbjct: 826 CCTMGV 831
>sp|MCP_EHV1B|MAJOR capsid protein|Equine herpesvirus 1 (strain Ab4p)
Query: 4 CCTQGV 9
CCT GV
Sbjct: 826 CCTMGV 831
>sp|MCP_SUHVS|MAJOR capsid protein|Suid herpesvirus 1 (strain Indiana
Query: 4 CCTQGV 9
CCT GV
Sbjct: 799 CCTMGV 804
>sp|ORFC_PSHV1|UNCHARACTERIZED protein ORFC|Psittacid herpesvirus 1 (isolate Amazon
Query: 2 SPCCTQGVP 10
SPC + G P
Sbjct: 96 SPCGSSGTP 104
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 CCTQGV 9
CCT GV
Sbjct: 845 CCTMGV 850
>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)
Query: 1 LSPCCTQ 7
LS CCT+
Sbjct: 2700 LSKCCTK 2706
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 1 LSPCCTQ 7
LS CCT+
Sbjct: 2700 LSKCCTK 2706
>sp|VP03_SHV21|PROBABLE membrane antigen 3|Saimiriine herpesvirus 2 (strain 11)
Query: 1 LSPCCTQG 8
L PC TQG
Sbjct: 1117 LIPCWTQG 1124
>sp|SPIKE_CVMA5|SPIKE glycoprotein|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 LSPCCTQGVP 10
+SPC TQ P
Sbjct: 487 VSPCTTQTKP 496
92|SequenceR|465|456|AWSGGLSPCC
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 AWSGGLSPCC 10
AW G LS CC
Sbjct: 256 AWDGYLSSCC 265
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 AWSGGLSPCC 10
AW G LS CC
Sbjct: 256 AWDGYLSSCC 265
>sp|YR024_MIMIV|UNCHARACTERIZED protein R24|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 WSGGLSPCC 10
WSG CC
Sbjct: 131 WSGSFDACC 139
>sp|GP_SFTS|ENVELOPMENT polyprotein|Dabie bandavirus (Severe fever with
Query: 2 WSGGLSPC 9
WSG LSPC
Sbjct: 92 WSGLLSPC 99
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 WSGGLSPC 9
WSG LSPC
Sbjct: 94 WSGLLSPC 101
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate
Query: 2 WSGGLSPC 9
WSG LSPC
Sbjct: 92 WSGLLSPC 99
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 WSGGLSPC 9
+SG +SPC
Sbjct: 2003 YSGAVSPC 2010
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 2 WSGGLSPCC 10
W GG P C
Sbjct: 1495 WKGGTCPKC 1503
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 2 WSGGLSPCC 10
W GG P C
Sbjct: 1495 WKGGTCPKC 1503
>sp|389L_IIV6|PROBABLE serine/threonine-protein kinase 389L|Invertebrate iridescent virus
Query: 2 WSGGLSP 8
WSGG+ P
Sbjct: 333 WSGGILP 339
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 1 AWSGGLS 7
AW+GGL+
Sbjct: 540 AWTGGLA 546
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AWSGGLS 7
AW+GGL+
Sbjct: 540 AWTGGLA 546
>sp|062L_IIV3|UNCHARACTERIZED protein 062L|Invertebrate iridescent virus 3 (IIV-3)
Query: 2 WSGGLSPC 9
WSGG + C
Sbjct: 225 WSGGTASC 232
>sp|VE2_BPV5|REGULATORY protein E2|Bovine papillomavirus type 5
Query: 4 GGLSPCC 10
GG PCC
Sbjct: 323 GGCRPCC 329
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 SGGLSPC 9
+GGL PC
Sbjct: 125 AGGLGPC 131
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 WSGGLSPCC 10
W+G S CC
Sbjct: 258 WTGFKSSCC 266
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 WSGGLSPCC 10
W+G S CC
Sbjct: 258 WTGFKSSCC 266
>sp|FIBER_BPK5|TAIL spike protein|Escherichia virus K5 (Bacteriophage K5)
Query: 1 AWSGGLS 7
AWSGG +
Sbjct: 491 AWSGGFT 497
>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus
Query: 3 SGGLSPC 9
SGGLS C
Sbjct: 1658 SGGLSSC 1664
>sp|B14_SHEVN|PROTEIN B14 homolog|Sheeppox virus (strain InS-1) (SPPV)
Query: 2 WSGGLSPCC 10
W G SP C
Sbjct: 110 WGGESSPTC 118
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 2 WSGGLSPCC 10
W GG P C
Sbjct: 1504 WKGGNCPKC 1512
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 WSGGLSPCC 10
W+G +SP C
Sbjct: 763 WTGSISPKC 771
>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)
Query: 5 GLSPCC 10
GLS CC
Sbjct: 2699 GLSKCC 2704
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 5 GLSPCC 10
GLS CC
Sbjct: 2699 GLSKCC 2704
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 AWSGGLSPC 9
AW GL+ C
Sbjct: 1315 AWRAGLATC 1323
>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus
Query: 2 WSGGLSPCC 10
W+G + CC
Sbjct: 252 WTGFKTACC 260
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 AWSGGLSPC 9
AW GL+ C
Sbjct: 1315 AWRAGLATC 1323
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 AWSGGLSPC 9
AW GL+ C
Sbjct: 1311 AWRAGLATC 1319
>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 1 AWSGGLSPCC 10
A +GG S CC
Sbjct: 2451 AANGGTSYCC 2460
>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 1 AWSGGLSPCC 10
A +GG S CC
Sbjct: 2451 AANGGTSYCC 2460
>sp|VE8E2_BPV5|PROTEIN E8^E2C|Bovine papillomavirus type 5
Query: 4 GGLSPCC 10
GG PCC
Sbjct: 139 GGCRPCC 145
>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 1 AWSGGLSPCC 10
A +GG S CC
Sbjct: 2458 AANGGTSYCC 2467
>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 1 AWSGGLSPCC 10
A +GG S CC
Sbjct: 2458 AANGGTSYCC 2467
>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 2 WSGGLSPCC 10
W+G + CC
Sbjct: 252 WTGFKTACC 260
>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus
Query: 2 WSGGLSPCC 10
W+G + CC
Sbjct: 252 WTGFKTACC 260
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 WSGGLSPCC 10
W+G SP C
Sbjct: 763 WTGSFSPKC 771
>sp|DPO11_BPK64|DEPOLYMERASE, capsule K11-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)
Query: 1 AWSGGLSP 8
AW G L+P
Sbjct: 181 AWFGALNP 188
>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 2 WSGGLSPC 9
W +SPC
Sbjct: 1505 WDSTMSPC 1512
>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 2 WSGGLSPC 9
W +SPC
Sbjct: 1505 WDSTMSPC 1512
>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 2 WSGGLSPC 9
W +SPC
Sbjct: 1505 WDSTMSPC 1512
>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 2 WSGGLSPC 9
W +SPC
Sbjct: 1505 WDSTMSPC 1512
>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 2 WSGGLSPC 9
W +SPC
Sbjct: 1505 WDSTMSPC 1512
>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 2 WSGGL 6
WSGGL
Sbjct: 5821 WSGGL 5825
>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus
Query: 2 WSGGLSPC 9
W +SPC
Sbjct: 1498 WDSTMSPC 1505
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 2 WSGGLSPCC 10
W+ +S CC
Sbjct: 258 WTSYVSTCC 266
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 2 WSGGLSPCC 10
W+ +S CC
Sbjct: 258 WTSYVSTCC 266
93|SequenceR|470|461|PLQCCAWSGG
>sp|GLYCO_IHNVW|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 4 CCAWSG 9
CC WSG
Sbjct: 483 CCCWSG 488
>sp|GLYCO_IHNVR|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 4 CCAWSG 9
CC WSG
Sbjct: 483 CCCWSG 488
>sp|GLYCO_IHNVO|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 4 CCAWSG 9
CC WSG
Sbjct: 483 CCCWSG 488
>sp|Y158B_SIRV1|UNCHARACTERIZED protein 158B|Sulfolobus islandicus rod-shaped virus 1
Query: 2 LQCCAW 7
LQCC W
Sbjct: 10 LQCCYW 15
>sp|YR328_MIMIV|UNCHARACTERIZED protein R328|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 QCCAWSG 9
CC W+G
Sbjct: 234 HCCIWNG 240
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 4 CCAWS 8
CC+WS
Sbjct: 4581 CCSWS 4585
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 4 CCAWS 8
CC+WS
Sbjct: 4581 CCSWS 4585
>sp|R1AB_CVTMI|REPLICASE polyprotein 1ab|Turkey coronavirus (strain Minnesota) (TCoV)
Query: 4 CCAWS 8
CC WS
Sbjct: 139 CCTWS 143
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 PLQCCAWSGG 10
P+ CC++ G
Sbjct: 2452 PIHCCSFFSG 2461
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 PLQCCAWSGG 10
P+ CC++ G
Sbjct: 2364 PIHCCSFFSG 2373
>sp|POL2_BBWV2|RNA2 polyprotein|Broad bean wilt virus 2
Query: 2 LQCCAWSGG 10
LQ CAW G
Sbjct: 931 LQNCAWMRG 939
>sp|MYC_AVIOK|VIRAL myc transforming protein|Avian retrovirus OK10
Query: 2 LQCCAWSG 9
+Q C WSG
Sbjct: 116 IQDCMWSG 123
>sp|MYC_AVIMD|VIRAL myc transforming protein|Avian myelocytomatosis virus HBI
Query: 2 LQCCAWSG 9
+Q C WSG
Sbjct: 116 IQDCMWSG 123
>sp|MYC_AVIMC|VIRAL myc transforming protein|Avian myelocytomatosis virus 29 (Avian
Query: 2 LQCCAWSG 9
+Q C WSG
Sbjct: 116 IQDCMWSG 123
>sp|MYC_AVIM2|VIRAL myc transforming protein|Avian myelocytomatosis virus CMII
Query: 2 LQCCAWSG 9
+Q C WSG
Sbjct: 116 IQDCMWSG 123
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 4 CCAWS 8
CC WS
Sbjct: 4583 CCTWS 4587
>sp|022L_IIV3|TRANSMEMBRANE protein 022L|Invertebrate iridescent virus 3 (IIV-3)
Query: 2 LQCCAWSG 9
LQ C W+G
Sbjct: 49 LQTCHWAG 56
>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote
Query: 1 PLQCCAWSGG 10
PLQC A+ G
Sbjct: 1111 PLQCFAYITG 1120
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 QCCAWS 8
+CC WS
Sbjct: 911 RCCFWS 916
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 QCCAWS 8
+CC WS
Sbjct: 911 RCCFWS 916
>sp|POL2_BBWVS|RNA2 polyprotein|Broad bean wilt virus 1
Query: 2 LQCCAWSGG 10
LQ CAW G
Sbjct: 884 LQNCAWLRG 892
>sp|CVC1_ELHVK|CAPSID vertex component 1|Elephantid herpesvirus 1 (isolate Asian
Query: 4 CCAWS 8
CC WS
Sbjct: 422 CCIWS 426
>sp|MYC_FLVTT|VIRAL myc transforming protein|Feline leukemia virus FTT
Query: 2 LQCCAWSG 9
+Q C WSG
Sbjct: 130 IQDCMWSG 137
>sp|MYC_FLV|VIRAL myc transforming protein|Feline leukemia virus
Query: 2 LQCCAWSG 9
+Q C WSG
Sbjct: 130 IQDCMWSG 137
>sp|Y112_OSHVF|UNCHARACTERIZED protein ORF112|Ostreid herpesvirus 1 (isolate France)
Query: 2 LQCCAWSG 9
L CC W G
Sbjct: 257 LCCCFWIG 264
>sp|GH_BHV1C|ENVELOPE glycoprotein H|Bovine herpesvirus 1.1 (strain Cooper)
Query: 1 PLQCCAWSG 9
PL CA+ G
Sbjct: 720 PLDACAYCG 728
>sp|FIBER_BPK5|TAIL spike protein|Escherichia virus K5 (Bacteriophage K5)
Query: 6 AWSGG 10
AWSGG
Sbjct: 491 AWSGG 495
>sp|YO19_ADEG1|UNCHARACTERIZED protein ORF19|Fowl adenovirus A serotype 1
Query: 3 QCCAWS 8
Q CAWS
Sbjct: 113 QICAWS 118
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 1 PLQCCAW 7
P CC W
Sbjct: 220 PTGCCVW 226
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LQCCAWSGG 10
L+ AW+GG
Sbjct: 536 LRYAAWTGG 544
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LQCCAWSGG 10
L+ AW+GG
Sbjct: 536 LRYAAWTGG 544
>sp|DNB2_ADES1|DNA-BINDING protein|Snake adenovirus serotype 1 (SnAdV-1)
Query: 2 LQCCAWSGG 10
QCC +GG
Sbjct: 274 FQCCNATGG 282
>sp|DPOL_HPBDW|PROTEIN P|Duck hepatitis B virus (isolate
Query: 1 PLQCCAWSGG 10
P++ CA +GG
Sbjct: 256 PIRSCANNGG 265
94|SequenceR|475|466|CCVAHPLQCC
>sp|YL394_MIMIV|PUTATIVE HD domain-containing protein L394|Acanthamoeba polyphaga mimivirus
Query: 3 VAHPLQCC 10
+A+P QCC
Sbjct: 236 IAYPKQCC 243
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 CVAHPL 7
CVAHPL
Sbjct: 924 CVAHPL 929
>sp|TGB3_BSMV|MOVEMENT protein TGB3|Barley stripe mosaic virus (BSMV)
Query: 5 HPLQCC 10
HPL+CC
Sbjct: 5 HPLECC 10
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5316 CIRKPLLCC 5324
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5374 CIRKPLLCC 5382
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5404 CIRKPLLCC 5412
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5316 CIRKPLLCC 5324
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5354 CIRKPLLCC 5362
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5316 CIRKPLLCC 5324
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5316 CIRKPLLCC 5324
>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5316 CIRKPLLCC 5324
>sp|RDRP_CNV|RNA-DIRECTED RNA polymerase|Cucumber necrosis virus (CNV)
Query: 2 CVAHPLQ 8
C AHP+Q
Sbjct: 671 CQAHPVQ 677
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5349 CIRKPLLCC 5357
>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)
Query: 1 CCVAHPLQCC 10
C +AH CC
Sbjct: 509 CYLAHAALCC 518
>sp|RDRP_TBSVC|RNA-DIRECTED RNA polymerase|Tomato bushy stunt virus (strain
Query: 2 CVAHPLQ 8
C AHP+Q
Sbjct: 671 CQAHPVQ 677
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5407 CIRKPLLCC 5415
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5401 CIRKPLLCC 5409
>sp|RDRP_CRV|RNA-DIRECTED RNA polymerase|Cymbidium ringspot virus (CymRSV)
Query: 2 CVAHPLQ 8
C AHP+Q
Sbjct: 671 CQAHPVQ 677
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 CCVAHPLQC 9
CC H L C
Sbjct: 5816 CCFKHALGC 5824
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CCVAHPLQC 9
CC H L C
Sbjct: 5791 CCFKHALGC 5799
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5343 CIRRPFLCC 5351
>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5373 CIRRPFLCC 5381
>sp|VP5_FDVS|UNCHARACTERIZED protein VP5|Fiji disease virus (isolate Sugarcane)
Query: 3 VAHPLQC 9
V+HPL C
Sbjct: 341 VSHPLLC 347
>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5380 CIRRPFLCC 5388
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5420 CIRRPFLCC 5428
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 1 CCVAHPLQC 9
CC H L C
Sbjct: 5848 CCFKHALGC 5856
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5320 CIRRPFLCC 5328
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5318 CIRRPFLCC 5326
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5326 CIRRPFLCC 5334
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5329 CIRRPFLCC 5337
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5314 CIRRPFLCC 5322
>sp|CAPSD_FCVF9|CAPSID protein VP1|Feline calicivirus (strain F9) (FCV)
Query: 4 AHPLQCC 10
++PL CC
Sbjct: 34 SNPLMCC 40
>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5184 CIRRPFLCC 5192
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 4887 CIRKPFLCC 4895
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 4887 CIRKPFLCC 4895
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 4889 CIRKPFLCC 4897
>sp|VG12_GAHVM|UNCHARACTERIZED gene 12 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 CCVAHP 6
CC HP
Sbjct: 79 CCAFHP 84
95|SequenceR|480|471|HQRDECCVAH
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 QRDECCVAH 10
Q+ ECC+ H
Sbjct: 1158 QKGECCICH 1166
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 QRDECCVAH 10
Q+ ECC+ H
Sbjct: 1158 QKGECCICH 1166
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 HQRDECCV 8
H RD CCV
Sbjct: 1423 HVRDNCCV 1430
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 HQRDECCV 8
H DECC+
Sbjct: 1366 HIEDECCI 1373
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 HQRDECCV 8
H +D CCV
Sbjct: 1423 HVKDNCCV 1430
>sp|L_CPXVB|RNA-DIRECTED RNA polymerase L|Cupixi mammarenavirus (isolate Rat/Brasil/BeAn
Query: 2 QRDECCVAH 10
+++EC VAH
Sbjct: 1805 KQNECSVAH 1813
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 2 QRDECC 7
+RD+CC
Sbjct: 210 KRDDCC 215
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 QRDECCVAH 10
++ EC VAH
Sbjct: 1794 KQSECAVAH 1802
>sp|RIR2_EHV1B|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Equine herpesvirus 1 (strain Ab4p)
Query: 1 HQRDECCV 8
H R CC+
Sbjct: 208 HTRASCCI 215
>sp|YR592_MIMIV|PUTATIVE helicase R592|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 RDECC 7
+DECC
Sbjct: 447 KDECC 451
>sp|YR024_MIMIV|UNCHARACTERIZED protein R24|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 DECCVAH 10
D CC+ H
Sbjct: 136 DACCIKH 142
>sp|V061_FOWPN|PUTATIVE CC-type chemokine FPV061|Fowlpox virus (strain NVSL) (FPV)
Query: 3 RDECC 7
RD+CC
Sbjct: 28 RDDCC 32
>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)
Query: 2 QRDECCVA 9
Q D CC A
Sbjct: 567 QADPCCTA 574
>sp|VF302_IIV3|PUTATIVE zinc finger protein 012R|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 HQRDECCVAH 10
HQ+ + C AH
Sbjct: 20 HQKTKKCTAH 29
96|SequenceR|485|476|GAPCCHQRDE
>sp|VF295_IIV3|UNCHARACTERIZED protein 016R|Invertebrate iridescent virus 3 (IIV-3)
Query: 3 PCCHQRDE 10
PCC+QR +
Sbjct: 530 PCCYQRPQ 537
>sp|GL_ALHV1|ENVELOPE glycoprotein L|Alcelaphine herpesvirus 1 (strain C500)
Query: 4 CCHQRDE 10
CCHQ++E
Sbjct: 30 CCHQKNE 36
>sp|PA_I86A3|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/Tennessee/5/1986
Query: 1 GAPCCHQRDE 10
G P CHQR +
Sbjct: 272 GGPPCHQRSK 281
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 APCCHQRD 9
APCC+++D
Sbjct: 279 APCCYEKD 286
>sp|041R_FRG3G|UNCHARACTERIZED protein 041R|Frog virus 3 (isolate Goorha)
Query: 3 PCCHQRDE 10
PCC+ +D+
Sbjct: 526 PCCYSKDQ 533
>sp|POLS_MIDDV|STRUCTURAL polyprotein|Middelburg virus
Query: 2 APCCHQRD 9
APCC+++D
Sbjct: 294 APCCYEKD 301
>sp|YR106_MIMIV|UNCHARACTERIZED protein R106|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 PCCHQRD 9
PC HQ+D
Sbjct: 63 PCYHQKD 69
>sp|ENLYS_METM2|PSEUDOMUREIN endoisopeptidase|Methanobacterium phage psiM2 (PsiM2)
Query: 1 GAPCCHQ 7
GAPCC +
Sbjct: 284 GAPCCSR 290
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 4 CCHQRDE 10
CC+++DE
Sbjct: 166 CCYKKDE 172
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 APCCHQRDE 10
P CHQR +
Sbjct: 273 GPLCHQRSK 281
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PCCH 6
PCCH
Sbjct: 27 PCCH 30
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PCCH 6
PCCH
Sbjct: 27 PCCH 30
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PCCH 6
PCCH
Sbjct: 27 PCCH 30
>sp|VP2_BTV3V|OUTER capsid protein VP2|Bluetongue virus 3 (isolate South
Query: 4 CCHQRDE 10
CCH R E
Sbjct: 162 CCHVRTE 168
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 GAPCCHQRDE 10
G P C+QR +
Sbjct: 272 GGPPCYQRSK 281
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 APCCHQRD 9
APCC++++
Sbjct: 284 APCCYEKE 291
>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1
Query: 1 GAPCCHQR 8
G PC +QR
Sbjct: 622 GNPCANQR 629
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 APCCHQR 8
APCC+++
Sbjct: 290 APCCYEK 296
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 APCCHQR 8
APCC+++
Sbjct: 290 APCCYEK 296
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 APCCHQR 8
APCC+++
Sbjct: 283 APCCYEK 289
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GAPCC 5
G PCC
Sbjct: 4267 GVPCC 4271
>sp|ENLYS_BPM10|PSEUDOMUREIN endoisopeptidase PeiW|Methanothermobacter phage psiM100
Query: 1 GAPCC 5
G PCC
Sbjct: 262 GVPCC 266
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 APCCHQR 8
APCC+++
Sbjct: 283 APCCYEK 289
>sp|PA_I79A7|POLYMERASE acidic protein|Influenza A virus (strain A/Grey
Query: 1 GAPCCHQ 7
G PCC +
Sbjct: 273 GPPCCQR 279
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 APCCHQR 8
APCC+++
Sbjct: 283 APCCYEK 289
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 APCCHQR 8
APCC+++
Sbjct: 282 APCCYEK 288
>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)
Query: 4 CCHQRD 9
CCH+++
Sbjct: 1967 CCHKKE 1972
>sp|UL87_ALHV1|UNCHARACTERIZED gene 24 protein|Alcelaphine herpesvirus 1 (strain C500)
Query: 2 APCCHQR 8
APCC+ +
Sbjct: 433 APCCYSQ 439
>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus
Query: 1 GAPCC 5
G PCC
Sbjct: 93 GGPCC 97
>sp|1A_PZSVT|REPLICATION protein 1a|Pelargonium zonate spot virus (isolate
Query: 4 CCHQ 7
CCHQ
Sbjct: 948 CCHQ 951
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 GAPCCHQR 8
G PCC R
Sbjct: 528 GNPCCIDR 535
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 GAPCCH 6
GAP CH
Sbjct: 566 GAPPCH 571
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 GAPCCHQR 8
G PCC R
Sbjct: 532 GNPCCIDR 539
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GAPCCH 6
GAP CH
Sbjct: 566 GAPPCH 571
97|SequenceR|490|481|VNCTYGAPCC
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 NCTYGAP 8
NCT+GAP
Sbjct: 1638 NCTFGAP 1644
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 NCTYGAP 8
NCT+GAP
Sbjct: 1638 NCTFGAP 1644
>sp|REP_TPCTV|REPLICATION-ASSOCIATED protein|Tomato pseudo-curly top virus (TPCTV)
Query: 2 NCTYGAP 8
NC YG P
Sbjct: 288 NCKYGKP 294
>sp|REP_TMOV|REPLICATION-ASSOCIATED protein|Tomato mottle virus (isolate Florida)
Query: 2 NCTYGAP 8
NC YG P
Sbjct: 287 NCKYGKP 293
>sp|REP_TGMVY|REPLICATION-ASSOCIATED protein|Tomato golden mosaic virus (strain
Query: 2 NCTYGAP 8
NC YG P
Sbjct: 288 NCKYGKP 294
>sp|REP_PYMVV|REPLICATION-ASSOCIATED protein|Potato yellow mosaic virus (isolate
Query: 2 NCTYGAP 8
NC YG P
Sbjct: 287 NCKYGKP 293
>sp|REP_BGYMV|REPLICATION-ASSOCIATED protein|Bean golden yellow mosaic virus
Query: 2 NCTYGAP 8
NC YG P
Sbjct: 287 NCKYGKP 293
>sp|REP_BGYMJ|REPLICATION-ASSOCIATED protein|Bean golden yellow mosaic virus
Query: 2 NCTYGAP 8
NC YG P
Sbjct: 287 NCKYGKP 293
>sp|REP_ABMVW|REPLICATION-ASSOCIATED protein|Abutilon mosaic virus (isolate West
Query: 2 NCTYGAP 8
NC YG P
Sbjct: 287 NCKYGKP 293
>sp|REP_SLCV|REPLICATION-ASSOCIATED protein|Squash leaf curl virus (SLCV)
Query: 2 NCTYGAP 8
NC YG P
Sbjct: 283 NCKYGKP 289
>sp|REP_PHUV|REPLICATION-ASSOCIATED protein|Pepper huasteco yellow vein virus
Query: 2 NCTYGAP 8
NC YG P
Sbjct: 284 NCKYGKP 290
>sp|REP_CALCV|REPLICATION-ASSOCIATED protein|Cabbage leaf curl virus (isolate
Query: 2 NCTYGAP 8
NC YG P
Sbjct: 285 NCKYGKP 291
>sp|TRM1_MUHVS|TRIPARTITE terminase subunit 1|Murid herpesvirus 1 (strain Smith)
Query: 1 VNCTYGA 7
+NC YGA
Sbjct: 147 INCVYGA 153
>sp|TGB1_SHVX|MOVEMENT and silencing protein TGBp1|Shallot virus X (ShVX)
Query: 1 VNCTYGAP 8
V CT GAP
Sbjct: 50 VACTLGAP 57
>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain
Query: 2 NCTYGAPCC 10
NC AP C
Sbjct: 675 NCVTNAPLC 683
>sp|NCAP_SENDH|NUCLEOPROTEIN virus (strain Harris) (SeV)
Query: 4 TYGAPCC 10
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_SENDF|NUCLEOPROTEIN virus (strain Fushimi) (SeV)
Query: 4 TYGAPCC 10
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_SENDE|NUCLEOPROTEIN virus (strain Enders) (SeV)
Query: 4 TYGAPCC 10
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 4 TYGAPCC 10
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 4 TYGAPCC 10
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 4 TYGAPCC 10
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|RDRP_PLRVW|PROTEIN P1-P2|Potato leafroll virus (strain
Query: 2 NCTYGAPCC 10
NC AP C
Sbjct: 675 NCITNAPLC 683
>sp|VG54_ICHVA|UNCHARACTERIZED protein ORF54|Ictalurid herpesvirus 1 (strain Auburn)
Query: 2 NCTYGAP 8
NCT G P
Sbjct: 415 NCTLGQP 421
>sp|VG31_BPML5|GENE 31 protein|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 1 VNCTYGA 7
V+CT+GA
Sbjct: 381 VDCTWGA 387
>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate
Query: 1 VNCTYGAPC 9
V C+Y A C
Sbjct: 2347 VGCSYAALC 2355
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 2 NCTYGAP 8
+CTYG P
Sbjct: 1714 DCTYGEP 1720
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 2 NCTYGAP 8
+CTYG P
Sbjct: 1714 DCTYGEP 1720
>sp|ENV_FIVT2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate TM2)
Query: 1 VNCTYGAPCC 10
+N YG CC
Sbjct: 143 LNIKYGRRCC 152
>sp|TRM1_TUHV2|TRIPARTITE terminase subunit 1|Tupaiid herpesvirus (strain 2) (TuHV-2)
Query: 1 VNCTYG 6
+NC YG
Sbjct: 146 INCVYG 151
98|SequenceR|495|486|CSRAKVNCTY
>sp|VP2_EHDV1|OUTER capsid protein VP2|Epizootic hemorrhagic disease virus 1
Query: 1 CSRAKVNCTY 10
CS VNC Y
Sbjct: 149 CSHTPVNCAY 158
>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)
Query: 2 SRAKVNC 8
SRAK+NC
Sbjct: 1284 SRAKLNC 1290
>sp|VNS1_BTV10|NON-STRUCTURAL protein NS1|Bluetongue virus 10 (isolate USA)
Query: 1 CSRAKVNCTY 10
CS K NC +
Sbjct: 30 CSHLKRNCLF 39
99|SequenceR|500|491|VVEKECSRAK
>sp|REGQ_BPPS3|ANTITERMINATION protein Q|Bacteriophage PS34
Query: 1 VVEKECSRAK 10
VVEKEC R K
Sbjct: 139 VVEKECGRCK 148
>sp|REGQ_BPHK0|ANTITERMINATION protein Q|Escherichia phage HK022 (Bacteriophage HK022)
Query: 1 VVEKECSRAK 10
VVEKEC R K
Sbjct: 139 VVEKECGRCK 148
>sp|REGQ_LAMBD|ANTITERMINATION protein Q|Escherichia phage lambda (Bacteriophage lambda)
Query: 1 VVEKECSRAK 10
VVEKEC R K
Sbjct: 139 VVEKECGRCK 148
>sp|YR811_MIMIV|PUTATIVE ariadne-like RING finger protein|Acanthamoeba polyphaga mimivirus
Query: 1 VVEKECS 7
VVEKECS
Sbjct: 898 VVEKECS 904
>sp|VG43_ICHVA|UNCHARACTERIZED protein ORF43|Ictalurid herpesvirus 1 (strain Auburn)
Query: 3 EKECSRAK 10
EK+CSR +
Sbjct: 859 EKDCSRKR 866
>sp|YR857_MIMIV|UNCHARACTERIZED protein R857|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 KECSRA 9
KECSRA
Sbjct: 138 KECSRA 143
100|SequenceR|505|496|APQASVVEKE
***** No hits found ******
101|SequenceR|510|501|RALFTAPQAS
>sp|RPOTF_PRRSL|REPLICASE polyprotein 1TF|Porcine reproductive and respiratory syndrome
Query: 2 ALFTAPQAS 10
AL++APQAS
Sbjct: 1229 ALWSAPQAS 1237
102|SequenceR|515|506|GVHPSRALFT
***** No hits found ******
103|SequenceR|520|511|EVDKVGVHPS
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 EVDKVGVHPS 10
EVD+ +HPS
Sbjct: 684 EVDRFDLHPS 693
>sp|VP75_ALHV1|PROBABLE membrane antigen 75|Alcelaphine herpesvirus 1 (strain C500)
Query: 2 VDKVGVH 8
VDK+G+H
Sbjct: 537 VDKIGIH 543
>sp|M1_I30A0|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 5 VGVHPS 10
+G+HPS
Sbjct: 219 IGIHPS 224
>sp|VP91_NPVOP|CAPSID-ASSOCIATED protein Vp91|Orgyia pseudotsugata multicapsid polyhedrosis virus
Query: 1 EVDKVGVHP 9
EVD VG+ P
Sbjct: 462 EVDAVGLSP 470
>sp|DPOL_EHV1V|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain V592)
Query: 1 EVDKVGVHPS 10
EVD G+ PS
Sbjct: 741 EVDLAGLQPS 750
>sp|DPOL_EHV1B|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain Ab4p)
Query: 1 EVDKVGVHPS 10
EVD G+ PS
Sbjct: 741 EVDLAGLQPS 750
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 EVDKVGVHPS 10
E +VGV PS
Sbjct: 651 EASEVGVRPS 660
104|SequenceR|525|516|HGEGCEVDKV
>sp|DPOL_BPPRD|DNA-DIRECTED DNA polymerase|Enterobacteria phage PRD1 (Bacteriophage PRD1)
Query: 2 GEGCEVDK 9
GEGCEV +
Sbjct: 374 GEGCEVQE 381
>sp|YL404_MIMIV|PUTATIVE alpha/beta hydrolase L404|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 HGEGCEVDKV 10
HG GC+V V
Sbjct: 75 HGNGCDVYSV 84
>sp|RDRP_CMVKO|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Kor)
Query: 1 HGEGCEVDKV 10
+GE CE D V
Sbjct: 159 YGEECEADDV 168
>sp|ENV_RSVP|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup C
Query: 1 HGEGCE 6
HG GCE
Sbjct: 489 HGHGCE 494
>sp|ENV_ALVA|ENVELOPE glycoprotein gp95|Avian leukosis virus subgroup A
Query: 1 HGEGCE 6
HG GCE
Sbjct: 487 HGHGCE 492
>sp|ENV_RSVSB|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup B
Query: 1 HGEGCE 6
HG GCE
Sbjct: 494 HGHGCE 499
>sp|EA59_LAMBD|PROTEIN ea59|Escherichia phage lambda (Bacteriophage lambda)
Query: 1 HGEGCEVDKV 10
HGE C++ V
Sbjct: 45 HGEKCDIGNV 54
>sp|ENV_AVISR|ENVELOPE glycoprotein gp95|Avian sarcoma virus (strain rASV1441)
Query: 1 HGEGCE 6
HG GCE
Sbjct: 127 HGHGCE 132
>sp|ENV_RSVSA|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup A
Query: 1 HGEGCE 6
HG GCE
Sbjct: 127 HGHGCE 132
>sp|GLYC_RSVT|PUTATIVE envelope glycoprotein|Rice stripe virus (isolate T)
Query: 2 GEGCEVD 8
GEGC D
Sbjct: 462 GEGCRTD 468
>sp|GLYCO_IHNVW|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 3 EGCEVDKV 10
EGC +DK+
Sbjct: 45 EGCTLDKL 52
>sp|GLYCO_IHNVR|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 3 EGCEVDKV 10
EGC +DK+
Sbjct: 45 EGCTLDKL 52
>sp|GLYCO_IHNVO|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 3 EGCEVDKV 10
EGC +DK+
Sbjct: 45 EGCTLDKL 52
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 1 HGEGCEVDKV 10
HG+ E+DK+
Sbjct: 425 HGKVLEIDKI 434
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 HGEGCEVDKV 10
HG+ E+DK+
Sbjct: 425 HGKVLEIDKI 434
>sp|ENV_AVISU|ENVELOPE glycoprotein|UR2 avian sarcoma virus (UR2SV)
Query: 1 HGEGCE 6
HG GCE
Sbjct: 56 HGHGCE 61
>sp|ICP22_SUHVK|TRANSCRIPTIONAL regulator ICP22 homolog|Suid herpesvirus 1 (strain Kaplan)
Query: 2 GEGCEVDK 9
GE C+VD+
Sbjct: 180 GEECDVDE 187
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 GEGCEVD 8
GE CE D
Sbjct: 911 GESCEAD 917
>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 HGEGCEV 7
HG GC++
Sbjct: 459 HGFGCDI 465
>sp|REV_SIVG1|PROTEIN Rev|Simian immunodeficiency virus agm.grivet (isolate
Query: 2 GEGCE 6
GEGCE
Sbjct: 115 GEGCE 119
>sp|YL059_MIMIV|PUTATIVE ankyrin repeat protein L59|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 HGEGCEV 7
HG GC++
Sbjct: 239 HGVGCDI 245
105|SequenceR|530|521|NDHCFHGEGC
>sp|GLYC_RSVT|PUTATIVE envelope glycoprotein|Rice stripe virus (isolate T)
Query: 4 CFHGEGC 10
CF GEGC
Sbjct: 459 CFEGEGC 465
>sp|DNB2_ADES1|DNA-BINDING protein|Snake adenovirus serotype 1 (SnAdV-1)
Query: 1 NDHCFHGEG 9
N C+HGEG
Sbjct: 113 NLKCYHGEG 121
>sp|DUT_MUHVS|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Murid herpesvirus 1 (strain
Query: 3 HCFHGEGC 10
+CFH GC
Sbjct: 175 NCFHPPGC 182
>sp|DAM_BPP1|DNA N-6-adenine-methyltransferase|Escherichia phage P1 (Bacteriophage
Query: 1 NDHCFHG 7
N HCF+G
Sbjct: 598 NRHCFNG 604
>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is
Query: 4 CFHGEG 9
C HGEG
Sbjct: 469 CIHGEG 474
>sp|CAPSD_BYVU|CAPSID protein|Beet yellows virus (isolate Ukraine)
Query: 4 CFHGEGC 10
C HGE C
Sbjct: 23 CLHGEDC 29
>sp|YL529_MIMIV|UNCHARACTERIZED protein L529|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 NDHCFHGEGC 10
ND+ FH C
Sbjct: 142 NDYIFHQNNC 151
>sp|VGF_VARV|PRO-VARIOLA growth factor|Variola virus
Query: 1 NDHCFHG 7
N +CFHG
Sbjct: 50 NGYCFHG 56
>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2
Query: 3 HCFHGE 8
HC+H E
Sbjct: 646 HCYHSE 651
>sp|SPIKE_IBVM|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 3 HCFHGEGC 10
HC+ +GC
Sbjct: 113 HCYKYDGC 120
>sp|CVC1_SHV21|CAPSID vertex component 1|Saimiriine herpesvirus 2 (strain 11)
Query: 3 HCFHGEGC 10
HC +GC
Sbjct: 394 HCIRNQGC 401
>sp|DPOL_BPSPB|DNA-DIRECTED DNA polymerase|Bacillus phage SPbeta (Bacillus phage
Query: 3 HCFHGE 8
HCF+G+
Sbjct: 542 HCFYGD 547
>sp|Y068_SIFVH|UNCHARACTERIZED protein 68|Sulfolobus islandicus filamentous virus (isolate
Query: 3 HCFHGEGC 10
HC H E C
Sbjct: 51 HCSHDEYC 58
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 4 CFHGEGC 10
CFH GC
Sbjct: 294 CFHDVGC 300
>sp|Y202_AFV2P|PUTATIVE transmembrane protein ORF202|Acidianus filamentous virus 2 (isolate
Query: 3 HCFH 6
HCFH
Sbjct: 198 HCFH 201
>sp|DPOL_WMHBV|PROTEIN P|Woolly monkey hepatitis B virus
Query: 1 NDHCFH 6
+DHC H
Sbjct: 323 SDHCLH 328
>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 1 NDHCFHGEG 9
N+H HG G
Sbjct: 1044 NEHMTHGSG 1052
>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 1 NDHCFHGEG 9
N+H HG G
Sbjct: 1044 NEHMTHGSG 1052
>sp|GLYC_TACVF|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain Franze-Fernandez)
Query: 4 CFHGEGC 10
CF GE C
Sbjct: 217 CFEGEQC 223
>sp|GLYC_TACV5|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain V5) (TCRV)
Query: 4 CFHGEGC 10
CF GE C
Sbjct: 205 CFEGEQC 211
>sp|GLYC_TACVT|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain TRVL 11598)
Query: 4 CFHGEGC 10
CF GE C
Sbjct: 205 CFEGEQC 211
>sp|YR640_MIMIV|UNCHARACTERIZED protein R640|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 DHCFHGE 8
D+C++GE
Sbjct: 88 DYCYYGE 94
>sp|PORTL_BPN15|PORTAL protein|Escherichia phage N15 (Bacteriophage N15)
Query: 3 HCFHGEGC 10
H F+GE C
Sbjct: 142 HAFNGELC 149
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 1 NDHCFHGEG 9
N+H HG G
Sbjct: 1044 NEHMTHGSG 1052
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 1 NDHCFHGEG 9
N+H HG G
Sbjct: 1044 NEHMTHGSG 1052
>sp|L_OLVVA|RNA-DIRECTED RNA polymerase L|Oliveros mammarenavirus (isolate
Query: 2 DHCFHGEGC 10
D CF GC
Sbjct: 1668 DICFRWRGC 1676
106|SequenceR|535|526|RCCTQNDHCF
>sp|ENV_EIAVW|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 3 CTQNDHC 9
CT +DHC
Sbjct: 169 CTDSDHC 175
>sp|ENV_EIAV1|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 3 CTQNDHC 9
CT +DHC
Sbjct: 169 CTDSDHC 175
>sp|ENV_EIAVY|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 3 CTQNDHC 9
CT +DHC
Sbjct: 169 CTDSDHC 175
>sp|ENV_EIAVC|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 3 CTQNDHC 9
CT +DHC
Sbjct: 169 CTDSDHC 175
>sp|ENV_EIAV9|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 3 CTQNDHC 9
CT +DHC
Sbjct: 169 CTDSDHC 175
>sp|ENV_EIAV3|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 3 CTQNDHC 9
CT +DHC
Sbjct: 169 CTDSDHC 175
>sp|ENV_EIAV2|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 3 CTQNDHC 9
CT +DHC
Sbjct: 169 CTDSDHC 175
>sp|ENV_EIAV5|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 3 CTQNDHC 9
CT +DHC
Sbjct: 169 CTDSDHC 175
>sp|MVP_SLCV|MOVEMENT protein BC1|Squash leaf curl virus (SLCV)
Query: 1 RCCTQNDHC 9
R C + DHC
Sbjct: 48 RSCMKIDHC 56
>sp|MVP_BGYMV|MOVEMENT protein BC1|Bean golden yellow mosaic virus
Query: 1 RCCTQNDHC 9
R C + DHC
Sbjct: 48 RSCMKIDHC 56
>sp|YR840_MIMIV|PUTATIVE ankyrin repeat protein R840|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 RCCTQNDH 8
RC +QN H
Sbjct: 322 RCASQNGH 329
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 CTQNDH 8
C QNDH
Sbjct: 1949 CEQNDH 1954
>sp|MVP_BGYMJ|MOVEMENT protein BC1|Bean golden yellow mosaic virus
Query: 1 RCCTQNDHC 9
R C + DHC
Sbjct: 48 RSCMKIDHC 56
>sp|VG35_ICHVA|UNCHARACTERIZED protein ORF35|Ictalurid herpesvirus 1 (strain Auburn)
Query: 3 CTQNDHC 9
C Q DHC
Sbjct: 211 CLQVDHC 217
>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus
Query: 2 CCTQNDHCF 10
CCT ND +
Sbjct: 4640 CCTHNDRFY 4648
>sp|MVP_PYMVV|MOVEMENT protein BC1|Potato yellow mosaic virus (isolate
Query: 1 RCCTQNDHC 9
R C + DHC
Sbjct: 48 RSCMKIDHC 56
>sp|MVP_CALCV|MOVEMENT protein BC1|Cabbage leaf curl virus (isolate
Query: 1 RCCTQNDHC 9
R C + DHC
Sbjct: 48 RSCMKIDHC 56
>sp|VFUS_VACC6|14 kDa fusion protein|Vaccinia virus (strain WR 65-16)
Query: 1 RCCTQND 7
+CC +ND
Sbjct: 96 KCCKRND 102
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 CTQNDHC 9
C QND C
Sbjct: 145 CIQNDSC 151
>sp|PG154_VACCW|PROTEIN OPG154|Vaccinia virus (strain Western Reserve)
Query: 1 RCCTQND 7
+CC +ND
Sbjct: 70 KCCKRND 76
>sp|BC1_TGMVY|MOVEMENT protein BC1|Tomato golden mosaic virus (strain
Query: 1 RCCTQNDHC 9
R C + DHC
Sbjct: 48 RSCMKIDHC 56
>sp|PG154_VAR67|PROTEIN OPG154|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RCCTQND 7
+CC +ND
Sbjct: 70 KCCKRND 76
>sp|BC1_TMOV|MOVEMENT protein BC1|Tomato mottle virus (isolate Florida)
Query: 1 RCCTQNDHC 9
R C + DHC
Sbjct: 48 RSCMKIDHC 56
>sp|PG154_VACCC|PROTEIN OPG154|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RCCTQND 7
+CC +ND
Sbjct: 70 KCCKRND 76
>sp|MVP_ABMVW|MOVEMENT protein BC1|Abutilon mosaic virus (isolate West
Query: 1 RCCTQNDHC 9
R C + DHC
Sbjct: 48 RSCMKIDHC 56
>sp|PG154_MONPV|PROTEIN OPG154|Monkeypox virus (MPXV)
Query: 1 RCCTQND 7
+CC +ND
Sbjct: 70 KCCKRND 76
>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)
Query: 2 CCTQNDHCF 10
CC ND F
Sbjct: 377 CCGNNDEPF 385
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka
Query: 1 RCCTQNDHC 9
RCC + HC
Sbjct: 60 RCCGELIHC 68
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 RCCTQNDHC 9
RCC + HC
Sbjct: 60 RCCGELIHC 68
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 2 CCTQNDHC 9
CC HC
Sbjct: 174 CCLYKQHC 181
>sp|VP07_BPAPS|PUTATIVE protein p7|Acyrthosiphon pisum secondary endosymbiont phage
Query: 3 CTQNDHCF 10
CT DH F
Sbjct: 87 CTSGDHGF 94
>sp|NSP1_ROTSP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A)
Query: 3 CTQNDHCF 10
C QN CF
Sbjct: 66 CVQNRRCF 73
>sp|NSP1_ROTD9|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Dog/United
Query: 3 CTQNDHCF 10
C QN CF
Sbjct: 66 CIQNKRCF 73
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CCTQNDHCF 10
CC+Q+D +
Sbjct: 5010 CCSQSDRFY 5018
>sp|NSP1_ROTS1|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)
Query: 3 CTQNDHCF 10
C QN CF
Sbjct: 66 CVQNRRCF 73
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 2 CCTQNDHCF 10
CC+Q+D +
Sbjct: 5010 CCSQSDRFY 5018
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 2 CCTQNDHCF 10
CC+Q+D +
Sbjct: 5010 CCSQSDRFY 5018
>sp|NSP1_ROTF6|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cat/Japan/FRV64/1989/G3P5B[3])
Query: 3 CTQNDHCF 10
C QN CF
Sbjct: 66 CIQNKRCF 73
107|SequenceR|540|531|GQRNDRCCTQ
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 3 RNDRCC 8
R D+CC
Sbjct: 639 RGDKCC 644
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 3 RNDRCC 8
R D+CC
Sbjct: 639 RGDKCC 644
>sp|RP19_FOWPN|DNA-DIRECTED RNA polymerase 19 kDa|Fowlpox virus (strain NVSL) (FPV)
Query: 1 GQRNDRCCT 9
G+ +D CCT
Sbjct: 32 GETSDDCCT 40
108|SequenceR|545|536|PCCAWGQRND
>sp|VP03_ALHV1|PROBABLE tegument protein antigen 3|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 PCCAWGQR 8
P C WGQ+
Sbjct: 305 PMCGWGQQ 312
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 CCAWGQR 8
CC+W +R
Sbjct: 4581 CCSWSER 4587
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 CCAWGQR 8
CC+W +R
Sbjct: 4581 CCSWSER 4587
>sp|R1AB_CVTMI|REPLICASE polyprotein 1ab|Turkey coronavirus (strain Minnesota) (TCoV)
Query: 2 CCAWGQR 8
CC W +R
Sbjct: 139 CCTWSER 145
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 CCAWGQR 8
CC W +R
Sbjct: 4583 CCTWSER 4589
>sp|RPO1_MIMIV|DNA-DIRECTED RNA polymerase subunit 1|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 CCAWGQRND 10
C WG RN+
Sbjct: 1217 CRNWGTRNE 1225
>sp|TIPJ_LAMBD|TIP attachment protein J|Escherichia phage lambda (Bacteriophage
Query: 4 AWGQRND 10
AWGQ+ D
Sbjct: 697 AWGQQGD 703
>sp|RDRP_RRSVT|RNA-DIRECTED RNA polymerase|Rice ragged stunt virus (isolate
Query: 3 CAWGQR 8
C WG+R
Sbjct: 1065 CEWGER 1070
>sp|EXOD_BPT4|EXODEOXYRIBONUCLEASE phage T4 (Bacteriophage T4)
Query: 1 PCCAWGQRN 9
PC W QR+
Sbjct: 148 PCKFWNQRD 156
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 CCAWGQ 7
CCA+G+
Sbjct: 101 CCAYGE 106
>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)
Query: 2 CCAWGQ 7
CCA+G+
Sbjct: 101 CCAYGE 106
>sp|L_AMPV1|RNA-DIRECTED RNA polymerase L|Avian metapneumovirus (isolate Canada
Query: 3 CAWGQR 8
C WG R
Sbjct: 1466 CGWGSR 1471
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 2 CCAWG 6
CC WG
Sbjct: 3801 CCYWG 3805
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 4 AWGQR 8
AWGQR
Sbjct: 508 AWGQR 512
>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)
Query: 2 CCAWG 6
CC WG
Sbjct: 3801 CCYWG 3805
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 CCAWG 6
CC WG
Sbjct: 3859 CCYWG 3863
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 2 CCAWG 6
CC WG
Sbjct: 3853 CCYWG 3857
>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 CCAWG 6
CC WG
Sbjct: 3859 CCYWG 3863
>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)
Query: 2 CCAWG 6
CC WG
Sbjct: 3853 CCYWG 3857
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 CAWGQRND 10
CAW +ND
Sbjct: 3500 CAWFVQND 3507
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 CAWGQRND 10
CAW +ND
Sbjct: 3520 CAWFVQND 3527
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 CAWGQRND 10
CAW +ND
Sbjct: 3550 CAWFVQND 3557
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 CCAWGQR 8
CCAW R
Sbjct: 774 CCAWHVR 780
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 CAWGQRND 10
CAW +ND
Sbjct: 3500 CAWFVQND 3507
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 CAWGQRND 10
CAW +ND
Sbjct: 3520 CAWFVQND 3527
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 CAWGQRND 10
CAW +ND
Sbjct: 3550 CAWFVQND 3557
>sp|ENV_SIVVT|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 1 PCCAWGQRN 9
P AWG RN
Sbjct: 72 PFEAWGDRN 80
>sp|REP_AHEBV|REPLICATION-ASSOCIATED protein|Avon-Heathcote Estuary associated kieseladnavirus (AHEaBV)
Query: 3 CAWGQR 8
C WG+R
Sbjct: 245 CGWGKR 250
>sp|GLYCO_IHNVW|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 2 CCAWGQR 8
CC W R
Sbjct: 483 CCCWSGR 489
>sp|GLYCO_IHNVR|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 2 CCAWGQR 8
CC W R
Sbjct: 483 CCCWSGR 489
>sp|NP_ADEM1|PRE-HISTONE-LIKE nucleoprotein|Murine adenovirus A serotype 1
Query: 4 AWGQRN 9
AWG RN
Sbjct: 42 AWGSRN 47
>sp|GLYCO_IHNVO|GLYCOPROTEIN hematopoietic necrosis virus (strain
Query: 2 CCAWGQR 8
CC W R
Sbjct: 483 CCCWSGR 489
>sp|ENLYS_BPPS3|SAR-ENDOLYSIN PS34
Query: 3 CAWGQR 8
C WGQ+
Sbjct: 162 CLWGQQ 167
109|SequenceR|550|541|VGQRYPCCAW
>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)
Query: 4 RYPCC 8
RYPCC
Sbjct: 562 RYPCC 566
>sp|MVP_TVMV|P3N-PIPO polyprotein|Tobacco vein mottling virus (TVMV)
Query: 4 RYPCC 8
RYPCC
Sbjct: 562 RYPCC 566
>sp|DPO12_BPK64|DEPOLYMERASE, capsule KN4-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)
Query: 1 VGQRYPC 7
+ QRYPC
Sbjct: 179 LSQRYPC 185
>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)
Query: 4 RYPCC 8
+YPCC
Sbjct: 586 KYPCC 590
>sp|MVP_PVMA|P3N-PIPO polyprotein|Potato virus A (PVA)
Query: 4 RYPCC 8
+YPCC
Sbjct: 586 KYPCC 590
>sp|UL87_ALHV1|UNCHARACTERIZED gene 24 protein|Alcelaphine herpesvirus 1 (strain C500)
Query: 5 YPCCAW 10
Y CC+W
Sbjct: 621 YECCSW 626
>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)
Query: 5 YPCC 8
YPCC
Sbjct: 595 YPCC 598
>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)
Query: 5 YPCC 8
YPCC
Sbjct: 597 YPCC 600
>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)
Query: 5 YPCC 8
YPCC
Sbjct: 597 YPCC 600
>sp|POLG_PVYO|GENOME polyprotein|Potato virus Y (strain O)
Query: 5 YPCC 8
YPCC
Sbjct: 572 YPCC 575
>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)
Query: 5 YPCC 8
YPCC
Sbjct: 572 YPCC 575
>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)
Query: 5 YPCC 8
YPCC
Sbjct: 572 YPCC 575
>sp|POLG_PVYC|GENOME polyprotein|Potato virus Y (strain C)
Query: 5 YPCC 8
YPCC
Sbjct: 572 YPCC 575
>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)
Query: 5 YPCC 8
YPCC
Sbjct: 575 YPCC 578
>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)
Query: 5 YPCC 8
YPCC
Sbjct: 727 YPCC 730
>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0
Query: 5 YPCC 8
YPCC
Sbjct: 727 YPCC 730
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 5 YPCC 8
YPCC
Sbjct: 573 YPCC 576
>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus
Query: 5 YPCC 8
YPCC
Sbjct: 606 YPCC 609
>sp|MVP_TEV|P3N-PIPO polyprotein|Tobacco etch virus (TEV)
Query: 5 YPCC 8
YPCC
Sbjct: 595 YPCC 598
>sp|MVP_SBMVN|P3N-PIPO polyprotein|Soybean mosaic virus (strain N)
Query: 5 YPCC 8
YPCC
Sbjct: 597 YPCC 600
>sp|MVP_SBMVG|P3N-PIPO polyprotein|Soybean mosaic virus (strain G2)
Query: 5 YPCC 8
YPCC
Sbjct: 597 YPCC 600
>sp|MVP_PVYN|P3N-PIPO polyprotein|Potato virus Y (strain N)
Query: 5 YPCC 8
YPCC
Sbjct: 572 YPCC 575
>sp|MVP_PVYHU|P3N-PIPO polyprotein|Potato virus Y (strain Hungarian)
Query: 5 YPCC 8
YPCC
Sbjct: 572 YPCC 575
>sp|MVP_PEMVC|P3N-PIPO polyprotein|Pepper mottle virus (isolate California)
Query: 5 YPCC 8
YPCC
Sbjct: 575 YPCC 578
>sp|MVP_LMVE|P3N-PIPO polyprotein|Lettuce mosaic virus (strain E)
Query: 5 YPCC 8
YPCC
Sbjct: 727 YPCC 730
>sp|MVP_LMV0|P3N-PIPO polyprotein|Lettuce mosaic virus (strain 0
Query: 5 YPCC 8
YPCC
Sbjct: 727 YPCC 730
>sp|MVP_BYMV|P3N-PIPO polyprotein|Bean yellow mosaic virus
Query: 5 YPCC 8
YPCC
Sbjct: 573 YPCC 576
>sp|MVP_BCMNN|P3N-PIPO polyprotein|Bean common mosaic necrosis virus
Query: 5 YPCC 8
YPCC
Sbjct: 606 YPCC 609
>sp|ETF2_MSEPV|EARLY transcription factor 82 kDa|Melanoplus sanguinipes entomopoxvirus
Query: 5 YPCC 8
YPCC
Sbjct: 472 YPCC 475
>sp|CAPSH_ADES1|HEXON protein|Snake adenovirus serotype 1 (SnAdV-1)
Query: 2 GQRYPC 7
GQ++PC
Sbjct: 199 GQQFPC 204
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 YPCC 8
YPCC
Sbjct: 26 YPCC 29
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 YPCC 8
YPCC
Sbjct: 26 YPCC 29
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 YPCC 8
YPCC
Sbjct: 26 YPCC 29
>sp|TRM3_PSHV1|TRIPARTITE terminase subunit 3|Psittacid herpesvirus 1 (isolate Amazon
Query: 5 YPCCAW 10
+PC AW
Sbjct: 62 FPCRAW 67
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 GQRYPCC 8
G RYP C
Sbjct: 132 GTRYPLC 138
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 2 GQRYPCCAW 10
G+R P C W
Sbjct: 1013 GRRDPKCQW 1021
110|SequenceR|555|546|RDACCVGQRY
>sp|M_PRRSS|MEMBRANE protein|Porcine reproductive and respiratory syndrome
Query: 4 CCVGQRY 10
CC+G+RY
Sbjct: 101 CCLGRRY 107
>sp|M_PRRSL|MEMBRANE protein|Porcine reproductive and respiratory syndrome
Query: 4 CCVGQRY 10
CC+G+RY
Sbjct: 101 CCLGRRY 107
>sp|VPHE_NPVLD|POLYHEDRAL envelope protein|Lymantria dispar multicapsid nuclear polyhedrosis
Query: 1 RDACC 5
RDACC
Sbjct: 107 RDACC 111
>sp|RDRP_SCVLA|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-A
Query: 3 ACCVGQ 8
ACC GQ
Sbjct: 411 ACCTGQ 416
>sp|GAG_SCVLA|MAJOR capsid protein|Saccharomyces cerevisiae virus L-A (ScV-L-A)
Query: 3 ACCVGQ 8
ACC GQ
Sbjct: 411 ACCTGQ 416
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 RDACCVGQ 8
RD CCV +
Sbjct: 1425 RDNCCVKE 1432
>sp|VME1_CVPPU|MEMBRANE protein|Porcine transmissible gastroenteritis coronavirus (strain
Query: 3 ACCVGQRY 10
AC G+RY
Sbjct: 12 ACACGERY 19
>sp|VME1_CVPFS|MEMBRANE protein|Porcine transmissible gastroenteritis coronavirus (strain
Query: 3 ACCVGQRY 10
AC G+RY
Sbjct: 12 ACACGERY 19
>sp|VME1_CVPRM|MEMBRANE protein|Porcine respiratory coronavirus (strain RM4)
Query: 3 ACCVGQRY 10
AC G+RY
Sbjct: 12 ACTCGERY 19
>sp|VME1_CVPR8|MEMBRANE protein|Porcine respiratory coronavirus (strain 86/137004
Query: 3 ACCVGQRY 10
AC G+RY
Sbjct: 12 ACTCGERY 19
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RDACC 5
RDACC
Sbjct: 459 RDACC 463
>sp|ORF32_VZVO|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RDACCVGQ 8
RD C VGQ
Sbjct: 57 RDVCSVGQ 64
>sp|ORF32_VZVD|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RDACCVGQ 8
RD C VGQ
Sbjct: 57 RDVCSVGQ 64
>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 3 ACCVGQRY 10
ACC+G Y
Sbjct: 2293 ACCLGYYY 2300
>sp|VME1_FIPV|MEMBRANE protein|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 3 ACCVGQRY 10
AC G+RY
Sbjct: 13 ACVYGERY 20
>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon
Query: 4 CCVGQRY 10
CC G R+
Sbjct: 64 CCYGSRF 70
>sp|VME1_CVCAI|MEMBRANE protein|Canine coronavirus (strain Insavc-1) (CCoV)
Query: 3 ACCVGQRY 10
AC G+RY
Sbjct: 13 ACVYGERY 20
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 RDACC 5
RDACC
Sbjct: 460 RDACC 464
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 3 ACCVGQRY 10
ACC+G Y
Sbjct: 2293 ACCLGYYY 2300
>sp|ICP22_EHV4|TRANSCRIPTIONAL regulator ICP22 homolog|Equine herpesvirus 4 (strain 1942)
Query: 2 DACCVGQ 8
D+CC G+
Sbjct: 223 DSCCTGK 229
111|SequenceR|560|551|PCCHRRDACC
>sp|YL264_MIMIV|UNCHARACTERIZED WD repeat-containing protein L264|Acanthamoeba polyphaga mimivirus
Query: 2 CCHRRDACC 10
CC +++CC
Sbjct: 421 CCANKNSCC 429
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 3 CHRRDACC 10
CHR +A C
Sbjct: 2786 CHRLEAIC 2793
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 3 CHRRDACC 10
CHR +A C
Sbjct: 2787 CHRLEAIC 2794
>sp|UBC4_MIMIV|PROBABLE bifunctional E2/E3 enzyme R795|Acanthamoeba polyphaga mimivirus
Query: 2 CCHRRDACC 10
C H ACC
Sbjct: 105 CSHSFHACC 113
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 2 CCHRRD 7
CC+R+D
Sbjct: 170 CCYRKD 175
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 CCHRRD 7
CC+R+D
Sbjct: 170 CCYRKD 175
>sp|POLS_MIDDV|STRUCTURAL polyprotein|Middelburg virus
Query: 1 PCCHRRDA 8
PCC+ +DA
Sbjct: 295 PCCYEKDA 302
>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)
Query: 2 CCHRRD 7
CCH+++
Sbjct: 1967 CCHKKE 1972
>sp|HEPA_EHV1V|DNA helicase/primase complex-associated protein|Equine herpesvirus 1
Query: 1 PCCHRRDACC 10
PC D CC
Sbjct: 273 PCGEEVDYCC 282
>sp|HEPA_EHV1B|DNA helicase/primase complex-associated protein|Equine herpesvirus 1
Query: 1 PCCHRRDACC 10
PC D CC
Sbjct: 273 PCGEEVDYCC 282
>sp|ITP_SHV21|INNER tegument protein|Saimiriine herpesvirus 2 (strain 11)
Query: 2 CCHR 5
CCHR
Sbjct: 341 CCHR 344
>sp|YR106_MIMIV|UNCHARACTERIZED protein R106|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 PCCHRRD 7
PC H++D
Sbjct: 63 PCYHQKD 69
>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate
Query: 4 HRRDACC 10
+ RD+CC
Sbjct: 2048 NNRDSCC 2054
>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United States/W
Query: 3 CHRRDAC 9
CH R++C
Sbjct: 1811 CHIRESC 1817
>sp|ORF1_MBVLF|UNCHARACTERIZED protein ORF1|Mushroom bacilliform virus (isolate Australia/AUS
Query: 3 CHRRDAC 9
CH RD C
Sbjct: 166 CHLRDVC 172
112|SequenceR|565|556|CRFGAPCCHR
>sp|ENLYS_METM2|PSEUDOMUREIN endoisopeptidase|Methanobacterium phage psiM2 (PsiM2)
Query: 3 FGAPCCHR 10
GAPCC R
Sbjct: 283 LGAPCCSR 290
>sp|PA_I79A7|POLYMERASE acidic protein|Influenza A virus (strain A/Grey
Query: 4 GAPCCHR 10
G PCC R
Sbjct: 273 GPPCCQR 279
>sp|CAPSD_BPS13|CAPSID protein F|Enterobacteria phage S13 (Bacteriophage S13)
Query: 2 RFGAPCCH 9
R+G CCH
Sbjct: 158 RYGFRCCH 165
>sp|CAPSD_BPPHS|CAPSID protein F|Enterobacteria phage phiX174 (Isolate Sanger)
Query: 2 RFGAPCCH 9
R+G CCH
Sbjct: 158 RYGFRCCH 165
>sp|CAPSD_BPPHK|CAPSID protein F|Enterobacteria phage phiK (Bacteriophage phi-K)
Query: 2 RFGAPCCH 9
R+G CCH
Sbjct: 158 RYGFRCCH 165
>sp|GTA_NPVOP|PROBABLE global transactivator|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 CRFGAPCCH 9
CR CCH
Sbjct: 298 CRLRQVCCH 306
>sp|MCE_RDVA|PUTATIVE mRNA-capping enzyme P5|Rice dwarf virus (isolate Akita)
Query: 3 FGAPCCHR 10
FGAP HR
Sbjct: 515 FGAPNTHR 522
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 CRFGAPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 CRFGAPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 CRFGAPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 CRFGAPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|Y146_HVAVE|PUTATIVE structural protein ORF146|Heliothis virescens ascovirus 3e
Query: 6 PCCHR 10
PCC+R
Sbjct: 589 PCCYR 593
>sp|Y084_SFAVA|PUTATIVE structural protein ORF84|Spodoptera frugiperda ascovirus 1a
Query: 6 PCCHR 10
PCC+R
Sbjct: 567 PCCYR 571
>sp|1A_BMV|REPLICATION protein 1a|Brome mosaic virus (BMV)
Query: 4 GAPCCHR 10
G P CHR
Sbjct: 745 GVPSCHR 751
>sp|RDRP_CPVKS|RNA-DIRECTED RNA polymerase|Cryptosporidium parvum virus 1 (strain
Query: 1 CRFGAPC 7
CR GA C
Sbjct: 149 CRLGARC 155
>sp|ENLYS_BPM10|PSEUDOMUREIN endoisopeptidase PeiW|Methanothermobacter phage psiM100
Query: 3 FGAPCC 8
G PCC
Sbjct: 261 LGVPCC 266
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 CRFGAP 6
C FGAP
Sbjct: 1639 CTFGAP 1644
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 PCCH 9
PCCH
Sbjct: 27 PCCH 30
>sp|VF077_IIV3|PUTATIVE zinc finger protein 034R|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 CRFGAPC--CHR 10
C FGA C HR
Sbjct: 189 CYFGAQCGYAHR 200
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 PCCH 9
PCCH
Sbjct: 27 PCCH 30
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 PCCH 9
PCCH
Sbjct: 27 PCCH 30
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CRFGAPCCHR 10
C FGAP R
Sbjct: 454 CGFGAPLLAR 463
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CRFGAPCCHR 10
C FGAP R
Sbjct: 454 CGFGAPLLAR 463
>sp|VG12_GAHVM|UNCHARACTERIZED gene 12 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 CRFGAP 6
C FGAP
Sbjct: 90 CEFGAP 95
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CRFGAP 6
C FGAP
Sbjct: 1639 CTFGAP 1644
>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus
Query: 4 GAPCC 8
G PCC
Sbjct: 93 GGPCC 97
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GAPCC 8
G PCC
Sbjct: 4267 GVPCC 4271
>sp|ENV_SMRVH|ENVELOPE glycoprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)
Query: 3 FGAPC 7
FGAPC
Sbjct: 33 FGAPC 37
113|SequenceR|570|561|TGRAACRFGA
>sp|HELI_ICHVA|PROBABLE ATP-dependent helicase 25|Ictalurid herpesvirus 1 (strain Auburn)
Query: 2 GRAACRFGA 10
G A+CRFGA
Sbjct: 324 GSASCRFGA 332
>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)
Query: 3 RAACRFGA 10
R AC+FG+
Sbjct: 1461 RGACKFGS 1468
>sp|HEMA_I56A2|HEMAGGLUTININ A virus (strain A/Duck/England/1/1956
Query: 4 AACRFGA 10
AAC+FG
Sbjct: 149 AACKFGG 155
>sp|LTP_MHV68|LARGE tegument protein deneddylase|Murid herpesvirus 4 (MuHV-4) (Murine
Query: 1 TGRAACRFG 9
T +A C+FG
Sbjct: 18 TNQADCKFG 26
>sp|CVC1_EHV1B|CAPSID vertex component 1|Equine herpesvirus 1 (strain Ab4p)
Query: 1 TGRAACRFG 9
TG+ +CRF
Sbjct: 626 TGQHSCRFA 634
114|SequenceR|575|566|RRLCKTGRAA
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RLCKTGRAA 10
RLC+T RAA
Sbjct: 154 RLCRTDRAA 162
>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)
Query: 1 RRLCKTGRAA 10
R +C TGR A
Sbjct: 134 RSVCNTGRCA 143
>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)
Query: 1 RRLCKTGRAA 10
R +C TGR A
Sbjct: 134 RSVCNTGRCA 143
>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN)
Query: 1 RRLCKTGRAA 10
R +C TGR A
Sbjct: 134 RSVCNTGRCA 143
>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT)
Query: 1 RRLCKTGRAA 10
R +C TGR A
Sbjct: 134 RSVCNTGRCA 143
>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)
Query: 1 RRLCKTGRAA 10
R +C TGR A
Sbjct: 134 RSVCNTGRCA 143
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 1 RRLCKTGRAA 10
R +C TGR A
Sbjct: 134 RSVCNTGRCA 143
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN)
Query: 1 RRLCKTGRAA 10
R +C TGR A
Sbjct: 134 RSVCNTGRCA 143
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT)
Query: 1 RRLCKTGRAA 10
R +C TGR A
Sbjct: 134 RSVCNTGRCA 143
>sp|REP_CPBDV|REPLICATION-ASSOCIATED protein|Chaetoceros protobacilladnavirus 2 (Chaetoceros sp
Query: 4 CKTGRA 9
CKTGRA
Sbjct: 478 CKTGRA 483
>sp|VME1_BCHK9|MEMBRANE protein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 1 RRLCKTGRA 9
R LC+TG A
Sbjct: 102 RLLCRTGSA 110
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 RRLCKTGR 8
RR+C +GR
Sbjct: 734 RRICLSGR 741
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 RRLCKTGR 8
RR+C +GR
Sbjct: 734 RRICLSGR 741
115|SequenceR|580|571|WRPAERRLCK
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 WRPAERRLC 9
W+PA RR C
Sbjct: 83 WQPATRRRC 91
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 WRPAERRLC 9
W P RR+C
Sbjct: 3734 WNPLVRRIC 3742
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 WRPAERRLC 9
W P RR+C
Sbjct: 3743 WNPLVRRIC 3751
>sp|GB_SUHVF|ENVELOPE glycoprotein B|Suid herpesvirus 1 (strain Indiana-Funkhauser
Query: 1 WRPAERRLC 9
W P RR+C
Sbjct: 366 WAPKTRRVC 374
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 1 WRPAERRLC 9
W P RR+C
Sbjct: 3824 WNPLVRRIC 3832
>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 WRPAERRLC 9
W P RR+C
Sbjct: 3735 WNPLIRRIC 3743
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 WRPAERRLC 9
W P RR+C
Sbjct: 3735 WNPLIRRIC 3743
>sp|CAPSD_TTVV8|CAPSID protein|Torque teno virus (isolate Chimpanzee/Japan/Pt-TTV6/2000)
Query: 1 WRPAERRLC 9
W+P RR C
Sbjct: 73 WQPTVRRRC 81
>sp|EXO1_BPT5|PROBABLE exonuclease subunit 1|Escherichia phage T5 (Enterobacteria phage
Query: 1 WRPAERRLC 9
W+P +LC
Sbjct: 134 WKPPVSKLC 142
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 WRPAERRLC 9
W+P RR C
Sbjct: 75 WQPNYRRRC 83
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 WRPAERRLC 9
W+P RR C
Sbjct: 75 WQPNYRRRC 83
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 WRPAERRLCK 10
WRP+ CK
Sbjct: 30 WRPSTLTKCK 39
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 WRPAERRLC 9
W+P RR C
Sbjct: 75 WQPNYRRRC 83
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 WRPAERRLC 9
W+P RR C
Sbjct: 75 WQPNYRRRC 83
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 WRPAERRLC 9
W+PA R C
Sbjct: 76 WQPAMTRRC 84
>sp|CAPSD_TTVT1|CAPSID protein|Torque teno canis virus (isolate
Query: 1 WRPAERRLC 9
W P R LC
Sbjct: 60 WNPQHRHLC 68
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 1 WRPAERRLC 9
WRP E R C
Sbjct: 456 WRPGEWRAC 464
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 WRPAERRLC 9
WRP LC
Sbjct: 84 WRPLLEHLC 92
>sp|TRM1_SUHVF|TRIPARTITE terminase subunit 1|Suid herpesvirus 1 (strain Indiana-Funkhauser
Query: 1 WRPAERRL 8
+RPA RRL
Sbjct: 283 FRPASRRL 290
>sp|ICP22_GAHVM|TRANSCRIPTIONAL regulator ICP22 homolog|Gallid herpesvirus 2 (strain
Query: 1 WRPAERRLC 9
W+P RLC
Sbjct: 57 WKPDVARLC 65
>sp|ICP22_SUHVK|TRANSCRIPTIONAL regulator ICP22 homolog|Suid herpesvirus 1 (strain Kaplan)
Query: 1 WRPAERRL 8
WRP RRL
Sbjct: 83 WRPDTRRL 90
>sp|REP_CPBDV|REPLICATION-ASSOCIATED protein|Chaetoceros protobacilladnavirus 2 (Chaetoceros sp
Query: 1 WRPAERRLCK 10
W P ERR+ +
Sbjct: 390 WMPFERRITQ 399
>sp|VG28_BPMD2|MINOR tail protein Gp28|Mycobacterium phage D29 (Mycobacteriophage D29)
Query: 1 WRPAERRLCK 10
WR + R CK
Sbjct: 14 WRKIQLRRCK 23
116|SequenceR|585|576|RLPADWRPAE
>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)
Query: 2 LPADWR 7
LPADWR
Sbjct: 1497 LPADWR 1502
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 2 LPADWR 7
LPADWR
Sbjct: 1497 LPADWR 1502
>sp|VF169_ASFK5|TRANSMEMBRANE protein B169L|African swine fever virus (isolate
Query: 3 PADWRPAE 10
PAD++PAE
Sbjct: 136 PADFKPAE 143
>sp|DPOL_OSHVF|DNA polymerase|Ostreid herpesvirus 1 (isolate France)
Query: 2 LPADWRPAE 10
LP DW+P +
Sbjct: 1117 LPLDWQPGD 1125
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 LPADWRPA 9
L DWRPA
Sbjct: 290 LQQDWRPA 297
>sp|NSS_SFSV|NON-STRUCTURAL protein NS-S|Sandfly fever sicilian virus (SFS)
Query: 2 LPADWRPA 9
LPA W PA
Sbjct: 76 LPASWGPA 83
>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1549 LPTDWR 1554
>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1550 LPTDWR 1555
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1549 LPTDWR 1554
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1550 LPTDWR 1555
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1541 LPKDWR 1546
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1561 LPKDWR 1566
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1591 LPKDWR 1596
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1541 LPKDWR 1546
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1561 LPKDWR 1566
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1591 LPKDWR 1596
>sp|VP4_ROTME|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 PADWRPAE 10
P DW P E
Sbjct: 47 PVDWGPGE 54
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 1 RLPADW 6
RLP DW
Sbjct: 43 RLPEDW 48
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RLPADW 6
RLP DW
Sbjct: 43 RLPEDW 48
>sp|DPOL1_BPK32|DEPOLYMERASE 1, capsule K3-specific|Klebsiella phage KP32 (Bacteriophage KP32)
Query: 2 LPADW 6
LPADW
Sbjct: 619 LPADW 623
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RLPADWRP 8
+LP +W+P
Sbjct: 521 KLPGNWKP 528
>sp|GLYCO_TUPVT|GLYCOPROTEIN virus (isolate Tupaia/Thailand/-/1986) (TUPV)
Query: 3 PADWRPA 9
P +W+PA
Sbjct: 31 PQNWKPA 37
>sp|ENV_JEMBR|ENVELOPE glycoprotein|Jembrana disease virus (JDV)
Query: 5 DWRPAE 10
DWRP E
Sbjct: 521 DWRPEE 526
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 4 ADWRPAE 10
A WRP+E
Sbjct: 37 ATWRPSE 43
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 LPADWRPA 9
+PADW P
Sbjct: 3295 VPADWVPT 3302
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 LPADWRPA 9
+P DW PA
Sbjct: 3293 VPVDWVPA 3300
>sp|RPB1_FRG3G|PUTATIVE DNA-directed RNA polymerase 008R|Frog virus 3 (isolate Goorha)
Query: 3 PADWRPAE 10
P++WRP+
Sbjct: 363 PSEWRPSH 370
>sp|PHOSP_TPMV|PHOSPHOPROTEIN paramyxovirus (TPMV)
Query: 3 PADWRPAE 10
P DW P++
Sbjct: 331 PGDWDPSD 338
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 2 LPADWRPA 9
PA WRPA
Sbjct: 896 FPAPWRPA 903
>sp|RDRP_PVXHB|RNA replication protein|Potato virus X (strain HB)
Query: 5 DWRPAE 10
DWRP +
Sbjct: 411 DWRPVD 416
>sp|RDRP_PVXCP|RNA replication protein|Potato virus X (strain CP)
Query: 5 DWRPAE 10
DWRP +
Sbjct: 411 DWRPVD 416
117|SequenceR|593|581|LLQRLAPDRLPAD
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LLQRLAPD 8
L+QRLAPD
Sbjct: 756 LMQRLAPD 763
>sp|IE0_NPVAC|IMMEDIATE-EARLY protein IE-0|Autographa californica nuclear polyhedrosis virus
Query: 7 PDRLPAD 13
PDRLP D
Sbjct: 101 PDRLPDD 107
>sp|VME1_IBVM|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 158 LAKCEPDHLPKD 169
>sp|VME1_IBVK|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 158 LAKCEPDHLPKD 169
>sp|VME1_IBVH5|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 158 LAKCEPDHLPKD 169
>sp|VME1_IBVH1|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 158 LAKCEPDHLPKD 169
>sp|VME1_IBVG|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 156 LAKCEPDHLPKD 167
>sp|VME1_IBVDE|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 158 LAKCEPDHLPKD 169
>sp|VME1_IBVD1|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 158 LAKCEPDHLPKD 169
>sp|VME1_IBVBU|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 158 LAKCEPDHLPKD 169
>sp|VME1_IBVBC|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 158 LAKCEPDHLPKD 169
>sp|VME1_IBVB2|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 158 LAKCEPDHLPKD 169
>sp|VME1_IBVB|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 158 LAKCEPDHLPKD 169
>sp|VME1_IBV6|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 158 LAKCEPDHLPKD 169
>sp|VME1_IBV41|MEMBRANE protein|Avian infectious bronchitis virus (strain
Query: 2 LQRLAPDRLPAD 13
L + PD LP D
Sbjct: 158 LAKCEPDHLPKD 169
>sp|VP10_BANNV|STRUCTURAL protein VP10|Banna virus (BAV)
Query: 2 LQRLAPDRLPAD 13
L+++AP+ +P D
Sbjct: 163 LKQIAPNFIPGD 174
>sp|Y1940_ATV|PROTEIN ORF1940|Acidianus two-tailed virus (ATV)
Query: 2 LQRLAPDRLP 11
L+R+ DRLP
Sbjct: 473 LERVLADRLP 482
>sp|YO02_BPHC1|UNCHARACTERIZED 7.9 kDa protein in|Haemophilus phage HP1 (strain HP1c1)
Query: 1 LLQRLAPDRL 10
L QRLAP ++
Sbjct: 12 LYQRLAPQKI 21
THE END