1|Sequence|1|10|MWTLVSWVAL
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 WTLVSWVAL 10
WTL +WV +
Sbjct: 149 WTLNAWVKV 157
>sp|RDRP_SHVX|RNA replication protein|Shallot virus X (ShVX)
Query: 2 WTLVSW 7
WTL++W
Sbjct: 453 WTLLAW 458
Query: 3 TLVSWV 8
TL+SWV
Sbjct: 1163 TLISWV 1168
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+LV+W
Sbjct: 2156 IWSLVAW 2162
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+LV+W
Sbjct: 2156 IWSLVAW 2162
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+LV+W
Sbjct: 2155 IWSLVAW 2161
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+LV+W
Sbjct: 2153 IWSLVAW 2159
>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+LV+W
Sbjct: 2158 IWSLVAW 2164
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+L++W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+L++W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+L++W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+L++W
Sbjct: 2155 IWSLIAW 2161
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 WTLVSWVAL 10
WTL +WV +
Sbjct: 149 WTLNAWVKV 157
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+L++W
Sbjct: 1989 IWSLIAW 1995
>sp|P1_PEMVW|PROTEIN P1|Pea enation mosaic virus-1 (strain
Query: 2 WTLVSWVAL 10
W+L+ WV L
Sbjct: 257 WSLLPWVTL 265
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 WTLVSWVA 9
WT+ W A
Sbjct: 74 WTITDWKA 81
>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain
Query: 3 TLVSWV 8
TLVSW+
Sbjct: 1657 TLVSWI 1662
2|Sequence|6|15|SWVALTAGLV
>sp|SPIKE_BCHK9|SPIKE glycoprotein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 2 WVALTAGLV 10
W+A+ AG+V
Sbjct: 1216 WLAMIAGIV 1224
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 1 SWVALTAGL 9
SW+ L AGL
Sbjct: 152 SWLDLDAGL 160
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 1 SWVALTAGL 9
SW+ L AGL
Sbjct: 152 SWLDLDAGL 160
>sp|TMP_BPLSK|PROBABLE tape measure protein|Lactococcus phage SK1 (Lactococcus lactis
Query: 1 SWVALTAGLV 10
S VALTAG V
Sbjct: 493 SLVALTAGFV 502
>sp|TMP_BPLP2|PROBABLE tape measure protein|Lactococcus phage p2 (Lactococcus lactis
Query: 1 SWVALTAGLV 10
S VALTAG V
Sbjct: 493 SLVALTAGFV 502
>sp|RPOL_BPT3|DNA-DIRECTED RNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)
Query: 2 WVALTAG 8
WVA+T G
Sbjct: 279 WVAITGG 285
>sp|GLYC_RSVT|PUTATIVE envelope glycoprotein|Rice stripe virus (isolate T)
Query: 1 SWVALTAGLV 10
+W+ L AG+V
Sbjct: 792 NWMELLAGIV 801
3|Sequence|11|20|TAGLVAGTRC
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 1 TAGLVAGTRC 10
T GLV T C
Sbjct: 266 TRGLVTATEC 275
4|Sequence|16|25|AGTRCPDGQF
>sp|VPP_BPHC1|PROBABLE terminase, ATPase subunit|Haemophilus phage HP1 (strain HP1c1)
Query: 1 AGTRCPDGQF 10
G CPDGQ+
Sbjct: 339 GGRLCPDGQW 348
>sp|MVP_PVYHU|P3N-PIPO polyprotein|Potato virus Y (strain Hungarian)
Query: 2 GTRCPDGQ 9
G RCP GQ
Sbjct: 969 GPRCPGGQ 976
>sp|RDRP_TNVD|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain D)
Query: 4 RCPDGQ 9
RCPDG+
Sbjct: 477 RCPDGE 482
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 AGTRCPD 7
A TRCPD
Sbjct: 442 AATRCPD 448
>sp|CEP1_SHV21|CYTOPLASMIC envelopment protein 1|Saimiriine herpesvirus 2 (strain 11)
Query: 3 TRCPDGQF 10
+RCPD F
Sbjct: 144 SRCPDATF 151
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 AGTRCPD 7
A TRCPD
Sbjct: 442 AATRCPD 448
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 AGTRCPD 7
A TRCPD
Sbjct: 440 AATRCPD 446
>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RCPDGQ 9
RCPDG+
Sbjct: 57 RCPDGE 62
>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RCPDGQ 9
RCPDG+
Sbjct: 57 RCPDGE 62
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 2 GTRCPDGQ 9
TRCPD Q
Sbjct: 436 ATRCPDKQ 443
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 AGTRCPDGQF 10
AG C DG F
Sbjct: 53 AGRSCSDGTF 62
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GTRCPDGQF 10
G RCPD +
Sbjct: 133 GLRCPDNRL 141
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GTRCPDGQF 10
G RCPD +
Sbjct: 133 GLRCPDNRL 141
>sp|SPIKE_BC133|SPIKE glycoprotein|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 2 GTRCPDG 8
G RCP G
Sbjct: 198 GNRCPSG 204
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 GTRCPD 7
TRCPD
Sbjct: 471 ATRCPD 476
>sp|3004L_ASFM2|PROTEIN MGF 300-4L|African swine fever virus (isolate
Query: 2 GTRCPDGQ 9
G CP+GQ
Sbjct: 48 GNICPNGQ 55
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 GTRCPD 7
TRCPD
Sbjct: 442 ATRCPD 447
>sp|GP_HAZVJ|ENVELOPMENT polyprotein|Hazara virus (isolate JC280)
Query: 5 CPDGQ 9
CPDGQ
Sbjct: 765 CPDGQ 769
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 2 GTRCPD 7
TRCPD
Sbjct: 440 ATRCPD 445
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 2 GTRCPD 7
TRCPD
Sbjct: 441 ATRCPD 446
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 2 GTRCPD 7
TRCPD
Sbjct: 441 ATRCPD 446
>sp|A53_VACCC|TRUNCATED secreted TNF-receptor-like protein A53|Vaccinia virus (strain
Query: 4 RCPDGQF 10
RCP G+F
Sbjct: 53 RCPPGEF 59
>sp|A53R_VACCW|TRUNCATED secreted TNF-receptor-like protein A53R|Vaccinia virus (strain
Query: 4 RCPDGQF 10
RCP G+F
Sbjct: 53 RCPPGEF 59
>sp|POL_BLVJ|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Japanese
Query: 3 TRCPDGQF 10
T CP G+F
Sbjct: 63 TSCPPGRF 70
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 2 GTRCPD 7
TRCPD
Sbjct: 441 ATRCPD 446
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 2 GTRCPD 7
TRCPD
Sbjct: 450 ATRCPD 455
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 2 GTRCPDGQF 10
GTR PD F
Sbjct: 272 GTRVPDPDF 280
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|NRAM_I84A0|NEURAMINIDASE A virus (strain A/Guinea
Query: 1 AGTRCPDGQ 9
+ TRC DG+
Sbjct: 178 SATRCHDGK 186
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|VG12_ICHVA|PUTATIVE zinc-binding protein ORF12|Ictalurid herpesvirus 1 (strain
Query: 4 RCPDGQF 10
R PDG+F
Sbjct: 19 RVPDGEF 25
>sp|TIO_ATHV3|PROTEIN tio|Ateline herpesvirus 3 (AtHV-3) (Herpesvirus
Query: 3 TRCPDGQ 9
T+CPD Q
Sbjct: 120 TKCPDEQ 126
>sp|PRO_BLVJ|GAG-PRO polyprotein|Bovine leukemia virus (isolate Japanese
Query: 3 TRCPDGQF 10
T CP G+F
Sbjct: 63 TSCPPGRF 70
5|Sequence|21|30|PDGQFCPVAC
>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 PDGQFCPVA 9
P GQFC VA
Sbjct: 1956 PSGQFCNVA 1964
>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 PDGQFCPVA 9
P GQFC VA
Sbjct: 1956 PSGQFCNVA 1964
>sp|POLN_CRPVC|REPLICASE polyprotein|Cricket paralysis virus (isolate
Query: 1 PDGQFCPVA 9
P+G+FC +
Sbjct: 1238 PEGKFCAIG 1246
>sp|PAP1_CPRVZ|POLY(A) polymerase catalytic subunit|Nile crocodilepox virus (isolate
Query: 1 PDGQFCPVAC 10
PDG PV+C
Sbjct: 402 PDGAPHPVSC 411
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 PDGQFCPVA 9
PDGQ P+A
Sbjct: 80 PDGQGVPIA 88
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 PDGQFCPVA 9
PDGQ P+A
Sbjct: 80 PDGQGVPIA 88
>sp|HN_SV41|HEMAGGLUTININ-NEURAMINIDASE virus 41 (SV41)
Query: 3 GQFCPVAC 10
G FCP C
Sbjct: 452 GNFCPANC 459
>sp|RDRP_BPPH6|RNA-DIRECTED RNA polymerase|Pseudomonas phage phi6 (Bacteriophage phi-6)
Query: 1 PDGQFC 6
PDG FC
Sbjct: 262 PDGFFC 267
>sp|3BHS_FOWPN|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Fowlpox
Query: 3 GQFCPV 8
G++CPV
Sbjct: 192 GEYCPV 197
>sp|VG12_ICHVA|PUTATIVE zinc-binding protein ORF12|Ictalurid herpesvirus 1 (strain
Query: 1 PDGQFC 6
PDG+FC
Sbjct: 21 PDGEFC 26
>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 PDGQFCPVA 9
P GQFC V
Sbjct: 1956 PSGQFCNVT 1964
>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 PDGQFCPV 8
P GQFC V
Sbjct: 1926 PSGQFCNV 1933
>sp|YR034_MIMIV|UNCHARACTERIZED protein R34|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 DGQFCP 7
DG +CP
Sbjct: 10 DGMYCP 15
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 6 CPVAC 10
CP+AC
Sbjct: 471 CPIAC 475
>sp|RSAMI_BPPM6|RADICAL SAM Nalpha-GlyT isomerase|Pseudomonas phage M6
Query: 1 PDGQFCPVAC 10
P G +C V C
Sbjct: 120 PYGGYCTVGC 129
>sp|RDRP_PZSVT|RNA-DIRECTED RNA polymerase 2a|Pelargonium zonate spot virus (isolate
Query: 2 DGQFCPV 8
DG CPV
Sbjct: 173 DGNVCPV 179
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 DGQFC--PVA 9
DGQFC PVA
Sbjct: 356 DGQFCYSPVA 365
>sp|GD_SUHVR|ENVELOPE glycoprotein D|Suid herpesvirus 1 (strain Rice)
Query: 1 PDGQFCPVA 9
P+GQ CP A
Sbjct: 184 PEGQECPFA 192
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 1 PDGQFCPVA 9
P+G F P+A
Sbjct: 24 PEGYFTPIA 32
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 1 PDGQFCPVA 9
P+G F P+A
Sbjct: 24 PEGYFTPIA 32
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 1 PDGQFCPVA 9
P+G F P+A
Sbjct: 24 PEGYFTPIA 32
>sp|ICP4_PSHV1|MAJOR viral transcription factor ICP4|Psittacid herpesvirus 1 (isolate
Query: 3 GQFCPVA 9
GQ+CP A
Sbjct: 1701 GQYCPSA 1707
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 DGQFC--PVA 9
DGQFC PVA
Sbjct: 356 DGQFCYSPVA 365
6|Sequence|26|35|CPVACCLDPG
>sp|Y149_NPVAC|UNCHARACTERIZED 12.4 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 2 PVACCLDPG 10
P+ CC+D G
Sbjct: 92 PLPCCIDDG 100
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 CPVACCLDP 9
CP+ C DP
Sbjct: 84 CPMKCTEDP 92
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CPVACCLDP 9
CP+ C DP
Sbjct: 82 CPMKCAEDP 90
>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)
Query: 1 CPVACCLDP 9
CP+ C DP
Sbjct: 82 CPMKCAEDP 90
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 PVACCLDPG 10
P+AC + PG
Sbjct: 391 PLACSIRPG 399
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 1 CPVACCL 7
C ACCL
Sbjct: 181 CSAACCL 187
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 PVACCLDPG 10
P+ C L PG
Sbjct: 1294 PILCALTPG 1302
>sp|YVDG_VACCW|UNCHARACTERIZED 10.4 kDa protein|Vaccinia virus (strain Western Reserve)
Query: 5 CCLDPG 10
CC DPG
Sbjct: 27 CCKDPG 32
>sp|YVDG_VACCC|UNCHARACTERIZED 10.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CCLDPG 10
CC DPG
Sbjct: 27 CCKDPG 32
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CPVACCLDP 9
CP+ C DP
Sbjct: 82 CPMRCAEDP 90
>sp|PG057_VACCW|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Western Reserve)
Query: 1 CPVACCL 7
C ACCL
Sbjct: 181 CSAACCL 187
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CPVACCL 7
C ACCL
Sbjct: 181 CSAACCL 187
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CPVACCLDP 9
CP+ C DP
Sbjct: 82 CPMRCAEDP 90
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 CPVACCL 7
C ACCL
Sbjct: 181 CSAACCL 187
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CPVACCLDP 9
CP+ C DP
Sbjct: 82 CPMRCAEDP 90
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CPVACCL 7
C ACCL
Sbjct: 181 CSAACCL 187
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 1 CPVACCL 7
C ACCL
Sbjct: 181 CSAACCL 187
>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 CPVACCLDPG 10
CP C D G
Sbjct: 555 CPTFLCFDDG 564
>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 CPVACCLDPG 10
CP C D G
Sbjct: 555 CPTFLCFDDG 564
>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 CPVACCLDPG 10
CP C D G
Sbjct: 555 CPTFLCFDDG 564
>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 CPVACCLDPG 10
CP C D G
Sbjct: 555 CPTFLCFDDG 564
>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca
Query: 6 CLDPG 10
CLDPG
Sbjct: 4683 CLDPG 4687
>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)
Query: 1 CPVACC 6
CP ACC
Sbjct: 33 CPGACC 38
>sp|REP_CDDV1|REPLICATION-ASSOCIATED protein|Chaetoceros diatodnavirus 1 (Chaetoceros setoense
Query: 1 CPVACCLDP 9
C V C+DP
Sbjct: 154 CAVNYCIDP 162
>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)
Query: 1 CPVACCLDP 9
CP C DP
Sbjct: 96 CPRKCAEDP 104
>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)
Query: 1 CPVACCLDP 9
CP C DP
Sbjct: 96 CPRKCAEDP 104
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 CPVACC----LDP 9
CP+AC LDP
Sbjct: 471 CPIACVSGVYLDP 483
>sp|V206_FOWPN|G-PROTEIN coupled receptor homolog FPV206|Fowlpox virus (strain NVSL) (FPV)
Query: 5 CCLDP 9
CC+DP
Sbjct: 281 CCMDP 285
>sp|VG75_ICHVA|UNCHARACTERIZED protein ORF75|Ictalurid herpesvirus 1 (strain Auburn)
Query: 3 VACCLDPG 10
+ C LDPG
Sbjct: 244 IECALDPG 251
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 3 VACCLDPG 10
+ CC+ PG
Sbjct: 124 IVCCVPPG 131
7|Sequence|31|40|CLDPGGASYS
>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca
Query: 1 CLDPGGAS 8
CLDPG S
Sbjct: 4683 CLDPGNYS 4690
>sp|SCAF_SHV21|CAPSID scaffolding protein|Saimiriine herpesvirus 2 (strain 11)
Query: 2 LDPGGASY 9
LDPG ASY
Sbjct: 390 LDPGHASY 397
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 CLDPGG 6
CL+PGG
Sbjct: 1263 CLNPGG 1268
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 CLDPGG 6
CL+PGG
Sbjct: 1263 CLNPGG 1268
>sp|POLN_AURAV|POLYPROTEIN P1234|Aura virus (AURAV)
Query: 1 CLDPGG 6
CL PGG
Sbjct: 1261 CLKPGG 1266
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 3 DPGGASY 9
DPGG Y
Sbjct: 1137 DPGGQGY 1143
>sp|RDRP_PAV|RNA-DIRECTED RNA polymerase|Pariacoto virus (PaV)
Query: 5 GGASYS 10
GGASYS
Sbjct: 214 GGASYS 219
>sp|GE_PSHV1|ENVELOPE glycoprotein E|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 CLDPGG 6
CLDP G
Sbjct: 280 CLDPAG 285
8|Sequence|36|45|GASYSCCRPL
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 GASYSCCRPL 10
G SY C +PL
Sbjct: 1243 GISYKCVKPL 1252
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 3 SYSCCR 8
+Y+CCR
Sbjct: 332 NYTCCR 337
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 3 SYSCCR 8
+Y+CCR
Sbjct: 335 NYTCCR 340
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 3 SYSCCR 8
+Y+CCR
Sbjct: 335 NYTCCR 340
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 3 SYSCCR 8
+Y+CCR
Sbjct: 335 NYTCCR 340
>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca
Query: 2 ASYSCCRPL 10
ASY C +PL
Sbjct: 3927 ASYLCPKPL 3935
>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca
Query: 2 ASYSCCRPL 10
ASY C +PL
Sbjct: 3927 ASYLCPKPL 3935
>sp|CAP6_ADE41|PRE-PROTEIN VI|Human adenovirus F serotype 41
Query: 1 GASYSCCRPL 10
GASY RP+
Sbjct: 176 GASYPMTRPI 185
>sp|POLG_MRFVC|GENOME polyprotein|Maize rayado fino virus (isolate
Query: 1 GASYSCCRPL 10
GA Y RPL
Sbjct: 1194 GAGYGVARPL 1203
>sp|YR841_MIMIV|PUTATIVE ankyrin repeat protein R841|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 GASYSC 6
GASY+C
Sbjct: 495 GASYNC 500
9|Sequence|41|50|CCRPLLDKWP
>sp|RPB1_FRG3G|PUTATIVE DNA-directed RNA polymerase 008R|Frog virus 3 (isolate Goorha)
Query: 1 CCRPLLDKWP 10
CCRP +WP
Sbjct: 202 CCRPNARQWP 211
>sp|POLN_AURAV|POLYPROTEIN P1234|Aura virus (AURAV)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 1379 CRAIFKKWP 1387
>sp|RDRP_PCV87|REPLICASE large subunit|Peanut clump virus (isolate 87/TGTA2)
Query: 1 CCRPLLD 7
CC PLLD
Sbjct: 140 CCCPLLD 146
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 1366 CRAVAKKWP 1374
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 1366 CRAVAKKWP 1374
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 1370 CRAVAKKWP 1378
>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)
Query: 1 CCRPLLD 7
CC P+LD
Sbjct: 133 CCCPILD 139
>sp|1A_AMV|REPLICATION protein 1a|Alfalfa mosaic virus (AMV)
Query: 1 CCRPLLD 7
CC P+LD
Sbjct: 144 CCCPILD 150
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 1368 CRAVARKWP 1376
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 1365 CRAVARKWP 1373
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 34 CRAVARKWP 42
>sp|VG66_ICHVA|UNCHARACTERIZED protein ORF66|Ictalurid herpesvirus 1 (strain Auburn)
Query: 3 RPLLDKW 9
R LLDKW
Sbjct: 404 RDLLDKW 410
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 CRPLLDKWP 10
CR + +WP
Sbjct: 1381 CRAIYKRWP 1389
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 CRPLLDKWP 10
CR + +WP
Sbjct: 1381 CRAIYKRWP 1389
>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 4 PLLDKWP 10
P+L +WP
Sbjct: 685 PMLGQWP 691
>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 4 PLLDKWP 10
P+L +WP
Sbjct: 685 PMLGQWP 691
>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 4 PLLDKWP 10
P+L +WP
Sbjct: 682 PMLGQWP 688
>sp|MVP_ZYMVS|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain
Query: 4 PLLDKWP 10
P+L +WP
Sbjct: 685 PMLGQWP 691
>sp|MVP_ZYMVC|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain
Query: 4 PLLDKWP 10
P+L +WP
Sbjct: 682 PMLGQWP 688
>sp|MVP_ZYMVR|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain
Query: 4 PLLDKWP 10
P+L +WP
Sbjct: 685 PMLGQWP 691
>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)
Query: 2 CRPLLDKWP 10
C P L WP
Sbjct: 654 CVPKLGTWP 662
>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)
Query: 2 CRPLLDKWP 10
C P L WP
Sbjct: 654 CVPKLGTWP 662
>sp|MVP_PVYHU|P3N-PIPO polyprotein|Potato virus Y (strain Hungarian)
Query: 2 CRPLLDKWP 10
C P L WP
Sbjct: 654 CVPKLGTWP 662
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CRPLLDK 8
CRPLLD+
Sbjct: 206 CRPLLDE 212
>sp|MVP_PVYN|P3N-PIPO polyprotein|Potato virus Y (strain N)
Query: 2 CRPLLDKWP 10
C P L WP
Sbjct: 654 CVPKLGTWP 662
>sp|VF467_IIV3|UNCHARACTERIZED protein 061R|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 CCRPLLDKW 9
CR LLD W
Sbjct: 43 ACRQLLDIW 51
>sp|POLG_PVYO|GENOME polyprotein|Potato virus Y (strain O)
Query: 2 CRPLLDKWP 10
C P L WP
Sbjct: 654 CVPKLGTWP 662
>sp|POLG_PVYC|GENOME polyprotein|Potato virus Y (strain C)
Query: 2 CRPLLDKWP 10
C P L WP
Sbjct: 654 CVPKLGTWP 662
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 2 CRPLLDKWP 10
C PL+ K+P
Sbjct: 340 CLPLMQKFP 348
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CRPLLDK 8
CRPLLD+
Sbjct: 275 CRPLLDE 281
>sp|YL684_MIMIV|UNCHARACTERIZED protein L684|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CCRPLLD 7
CC P+L+
Sbjct: 206 CCNPVLN 212
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 2 CRPLLDK 8
CRPLLD+
Sbjct: 337 CRPLLDE 343
>sp|VLYS_BPAPS|PUTATIVE lysis protein S|Acyrthosiphon pisum secondary endosymbiont phage
Query: 2 CRPLLD 7
C+PLLD
Sbjct: 5 CKPLLD 10
>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)
Query: 2 CRPLLDK 8
CR LLDK
Sbjct: 733 CRHLLDK 739
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 PLLDKW 9
PLLD+W
Sbjct: 2302 PLLDRW 2307
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 PLLDKW 9
PLLD+W
Sbjct: 2302 PLLDRW 2307
>sp|Y137_AFV1Y|UNCHARACTERIZED protein ORF137|Acidianus filamentous virus 1 (isolate
Query: 2 CRPLLDKW 9
C LLD+W
Sbjct: 22 CIELLDEW 29
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 2 CRPLLDKWP 10
C PL+ K+P
Sbjct: 510 CLPLMQKFP 518
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 2 CRPLLDKWP 10
C PL+ K+P
Sbjct: 509 CLPLMQKFP 517
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 2 CRPLLDKWP 10
C PL+ K+P
Sbjct: 510 CLPLMQKFP 518
>sp|UL4_GAHVM|NUCLEAR protein UL4 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 4 PLLDKWP 10
P+LDK+P
Sbjct: 211 PILDKFP 217
>sp|E1BS_ADE07|E1B protein, small T-antigen|Human adenovirus B serotype 7
Query: 3 RPLLDKWP 10
R +LD WP
Sbjct: 132 RTILDYWP 139
>sp|VNS1_EHDV2|NON-STRUCTURAL protein NS1|Epizootic hemorrhagic disease virus 2
Query: 1 CCRPLLDKW 9
C R LLDK+
Sbjct: 104 CGRELLDKY 112
>sp|Y137_ADE02|UNCHARACTERIZED protein B-137|Human adenovirus C serotype 2
Query: 1 CCRPLLDKWP 10
CC WP
Sbjct: 125 CCASFFGHWP 134
10|Sequence|46|55|LDKWPTTLSR
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|MVP_SBMVG|P3N-PIPO polyprotein|Soybean mosaic virus (strain G2)
Query: 1 LDKWPTTL 8
L KWPT L
Sbjct: 683 LGKWPTML 690
>sp|MVP_SBMVN|P3N-PIPO polyprotein|Soybean mosaic virus (strain N)
Query: 1 LDKWPTTL 8
L KWPT L
Sbjct: 683 LGKWPTML 690
>sp|MVP_TUMVQ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Quebec)
Query: 1 LDKWPTTL 8
L KWPT L
Sbjct: 738 LGKWPTLL 745
>sp|P3_PCVC|UNCHARACTERIZED protein p3|Penicillium chrysogenum virus (isolate Caston/2003)
Query: 1 LDKWPTTL 8
LD WP TL
Sbjct: 343 LDNWPLTL 350
>sp|MVP_TUMVJ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Japanese)
Query: 1 LDKWPTTL 8
L KWPT L
Sbjct: 738 LGKWPTLL 745
>sp|VF244_IIV3|PUTATIVE phosphoesterase 078R|Invertebrate iridescent virus 3 (IIV-3)
Query: 2 DKWPT 6
DKWPT
Sbjct: 178 DKWPT 182
>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)
Query: 1 LDKWPTTL 8
L KWPT L
Sbjct: 683 LGKWPTML 690
>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)
Query: 1 LDKWPTTL 8
L KWPT L
Sbjct: 683 LGKWPTML 690
>sp|YL560_MIMIV|UNCHARACTERIZED HNH endonuclease L560|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 LDKWP 5
LDKWP
Sbjct: 50 LDKWP 54
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 1 LDKWPTTL 8
L KWPT L
Sbjct: 738 LGKWPTLL 745
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LDKWPTTLSR 10
LD+W LSR
Sbjct: 549 LDRWSRDLSR 558
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LDKWPTTLSR 10
LD+W LSR
Sbjct: 549 LDRWSRDLSR 558
>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain
Query: 1 LDKWPTTL 8
L KWPT +
Sbjct: 774 LGKWPTMM 781
>sp|MVP_PSBMV|P3N-PIPO polyprotein|Pea seed-borne mosaic virus (strain
Query: 1 LDKWPTTL 8
L KWPT +
Sbjct: 774 LGKWPTMM 781
>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain
Query: 1 LDKWPTT 7
LDKW TT
Sbjct: 2343 LDKWYTT 2349
>sp|DNMK_BPT5|DEOXYNUCLEOSIDE-5'-MONOPHOSPHATE kinase|Escherichia phage T5 (Enterobacteria phage
Query: 2 DKWPTTLSR 10
D +PT LSR
Sbjct: 28 DTYPTCLSR 36
>sp|NEP_INCGL|NUCLEAR export protein|Influenza C virus (strain C/Great
Query: 1 LDKWP 5
LDKWP
Sbjct: 69 LDKWP 73
>sp|NEP_INCTA|NUCLEAR export protein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 LDKWP 5
LDKWP
Sbjct: 69 LDKWP 73
>sp|NEP_INCJH|NUCLEAR export protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 LDKWP 5
LDKWP
Sbjct: 69 LDKWP 73
>sp|NEP_INCHY|NUCLEAR export protein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 LDKWP 5
LDKWP
Sbjct: 74 LDKWP 78
>sp|NEP_INCAA|NUCLEAR export protein|Influenza C virus (strain C/Ann
Query: 1 LDKWP 5
LDKWP
Sbjct: 74 LDKWP 78
>sp|NEP_INCMI|NUCLEAR export protein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 LDKWP 5
LDKWP
Sbjct: 69 LDKWP 73
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 1 LDKWPTTL 8
L KWPT L
Sbjct: 738 LGKWPTLL 745
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 1 LDKWPTT 7
LD WP T
Sbjct: 481 LDPWPLT 487
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 1 LDKWPTT 7
LD WP T
Sbjct: 481 LDPWPLT 487
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 1 LDKWPTT 7
LD WP T
Sbjct: 481 LDPWPLT 487
>sp|VP7_ROTPY|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 DKWPTTLSR 10
DKW TLS+
Sbjct: 96 DKWKDTLSQ 104
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 1 LDKWPTT 7
LD WP T
Sbjct: 481 LDPWPLT 487
>sp|HN_MUMPV|HEMAGGLUTININ-NEURAMINIDASE orthorubulavirus (MuV)
Query: 1 LDKWPTT 7
LD WP T
Sbjct: 481 LDPWPLT 487
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 LDKWPTT 7
LD WP T
Sbjct: 481 LDPWPLT 487
>sp|ORF1_LRVLG|PUTATIVE ORF1 protein|Leishmania RNA virus 1 -
Query: 2 DKWPTTL 8
D+WP+T+
Sbjct: 39 DQWPSTV 45
11|Sequence|51|60|TTLSRHLGGP
>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 TTLSRHLGGP 10
+ LSRH GP
Sbjct: 1852 SDLSRHFAGP 1861
>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 1 TTLSRHLGGP 10
+ LSRH GP
Sbjct: 1835 SDLSRHFAGP 1844
>sp|TOP2_ASFWA|DNA topoisomerase 2|African swine fever virus (isolate
Query: 4 SRHLGG 9
SRHLGG
Sbjct: 787 SRHLGG 792
>sp|TOP2_ASFP4|DNA topoisomerase 2|African swine fever virus (isolate
Query: 4 SRHLGG 9
SRHLGG
Sbjct: 787 SRHLGG 792
>sp|TOP2_ASFM2|DNA topoisomerase 2|African swine fever virus (isolate
Query: 4 SRHLGG 9
SRHLGG
Sbjct: 786 SRHLGG 791
>sp|TOP2_ASFK5|DNA topoisomerase 2|African swine fever virus (isolate
Query: 4 SRHLGG 9
SRHLGG
Sbjct: 787 SRHLGG 792
>sp|TOP2_ASFB7|DNA topoisomerase 2|African swine fever virus (strain
Query: 4 SRHLGG 9
SRHLGG
Sbjct: 787 SRHLGG 792
>sp|MCEL_VACCW|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Western Reserve)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_CAMPS|MRNA-CAPPING enzyme catalytic subunit|Camelpox virus (strain CMS)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_CAMPM|MRNA-CAPPING enzyme catalytic subunit|Camelpox virus (strain M-96)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|PLP_BPSAV|O-SERYL-DTMP PLP-dependent decarboxylase|Salmonella phage ViI
Query: 1 TTLSRHLGG 9
T +SRH GG
Sbjct: 127 TAVSRHFGG 135
>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus
Query: 5 RHLGGP 10
RH+GGP
Sbjct: 90 RHVGGP 95
>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)
Query: 1 TTLSRHLGGP 10
++LS+H GP
Sbjct: 1225 SSLSKHFTGP 1234
>sp|MCP_IIV3|MAJOR capsid protein|Invertebrate iridescent virus 3 (IIV-3)
Query: 3 LSRHLGG 9
+S+HLGG
Sbjct: 237 VSKHLGG 243
12|Sequence|56|65|HLGGPCQVDA
>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus
Query: 1 HLGGPC 6
H+GGPC
Sbjct: 91 HVGGPC 96
>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)
Query: 2 LGGPCQVD 9
LG PCQ D
Sbjct: 1270 LGDPCQSD 1277
>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)
Query: 4 GPCQVDA 10
GPC VD+
Sbjct: 977 GPCHVDS 983
>sp|CATV_NPVAP|VIRAL cathepsin|Antheraea pernyi nuclear polyhedrosis virus
Query: 4 GPCQVDA 10
GPC+V+A
Sbjct: 206 GPCRVNA 212
>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)
Query: 1 HLGGPC 6
HLG PC
Sbjct: 1198 HLGTPC 1203
>sp|P2_RDVO|MINOR outer capsid protein P2|Rice dwarf virus (isolate O)
Query: 2 LGGPCQVD 9
L G CQVD
Sbjct: 410 LAGHCQVD 417
>sp|P2_RDVF|MINOR outer capsid protein P2|Rice dwarf virus (isolate Fujian)
Query: 2 LGGPCQVD 9
L G CQVD
Sbjct: 410 LAGHCQVD 417
>sp|DEPOL_BPK41|DEPOLYMERASE, capsule KN4-specific|Klebsiella phage KN4-1 (Bacteriophage KN4-1)
Query: 2 LGGPCQVDA 10
L GPC++ A
Sbjct: 774 LSGPCRIHA 782
>sp|MTC1_PBCVI|TYPE II methyltransferase M.CviJI|Paramecium bursaria Chlorella virus
Query: 5 PCQVD 9
PCQVD
Sbjct: 186 PCQVD 190
>sp|003R_FRG3G|UNCHARACTERIZED protein 3R|Frog virus 3 (isolate Goorha)
Query: 2 LGGPCQV 8
+G PCQV
Sbjct: 178 MGQPCQV 184
>sp|POL1_APMV|RNA1 polyprotein|Andean potato mottle virus (APMV)
Query: 1 HLGGPCQ 7
HLG PC+
Sbjct: 73 HLGLPCE 79
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 LGGPCQVDA 10
L PCQ D
Sbjct: 648 LNNPCQADG 656
>sp|L_LATVB|RNA-DIRECTED RNA polymerase L|Latino mammarenavirus (isolate Rat/Bolivia/MARU
Query: 1 HLGGPCQVD 9
HL GP VD
Sbjct: 2097 HLSGPVIVD 2105
>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HLGGPC 6
HLG PC
Sbjct: 39 HLGYPC 44
>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HLGGPC 6
HLG PC
Sbjct: 39 HLGYPC 44
>sp|POL2_GCMV|RNA2 polyprotein|Grapevine chrome mosaic virus (GCMV)
Query: 1 HLGGP 5
HLGGP
Sbjct: 1252 HLGGP 1256
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 GGPCQVD 9
G PC +D
Sbjct: 528 GNPCSID 534
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 3 GGPCQVD 9
G PC +D
Sbjct: 536 GNPCSID 542
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 3 GGPCQVD 9
G PC +D
Sbjct: 535 GNPCSID 541
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 PCQVD 9
PCQVD
Sbjct: 973 PCQVD 977
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 PCQVD 9
PCQVD
Sbjct: 978 PCQVD 982
>sp|GP_HAZVJ|ENVELOPMENT polyprotein|Hazara virus (isolate JC280)
Query: 1 HLGGPCQV 8
H GPC++
Sbjct: 262 HADGPCEI 269
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 3 GGPCQV 8
G PCQV
Sbjct: 28 GAPCQV 33
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 HLGGPC 6
HLGG C
Sbjct: 2956 HLGGRC 2961
13|Sequence|61|70|CQVDAHCSAG
>sp|YR407_MIMIV|PUTATIVE RNA methyltransferase R407|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CQVDAHC 7
C++D HC
Sbjct: 133 CRIDTHC 139
>sp|DPOL_OSHVF|DNA polymerase|Ostreid herpesvirus 1 (isolate France)
Query: 3 VDAHCSAG 10
+D HCS G
Sbjct: 49 MDGHCSTG 56
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 CQVDAHCS 8
CQ +HC+
Sbjct: 1147 CQTKSHCT 1154
>sp|PRIM_ELHVK|DNA primase|Elephantid herpesvirus 1 (isolate Asian
Query: 1 CQVDAHC 7
C VD HC
Sbjct: 336 CAVDNHC 342
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 CQVDAHCSA 9
CQV+ +C A
Sbjct: 199 CQVEPNCRA 207
>sp|SHUT_ADEGX|SHUTOFF protein|Fowl adenovirus C serotype 10
Query: 2 QVDAHCSAG 10
+VD H SAG
Sbjct: 359 EVDGHGSAG 367
>sp|VSR_MSTV|SUPPRESSOR of RNA silencing p3|Maize stripe virus (MStV)
Query: 4 DAHCSA 9
D HCSA
Sbjct: 32 DVHCSA 37
>sp|PTPH2_MDBVW|TYROSINE phosphatase H2|Microplitis demolitor bracovirus (isolate Webb)
Query: 6 HCSAG 10
HCSAG
Sbjct: 235 HCSAG 239
>sp|PTPH3_MDBVW|TYROSINE phosphatase H3|Microplitis demolitor bracovirus (isolate Webb)
Query: 6 HCSAG 10
HCSAG
Sbjct: 249 HCSAG 253
>sp|PTPH4_MDBVW|PROBABLE tyrosine phosphatase protein H4|Microplitis demolitor bracovirus
Query: 6 HCSAG 10
HCSAG
Sbjct: 141 HCSAG 145
14|Sequence|66|75|HCSAGHSCIF
>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca
Query: 1 HCSAGHSCI 9
HC H+CI
Sbjct: 2800 HCCGPHTCI 2808
>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca
Query: 1 HCSAGHSCI 9
HC H+CI
Sbjct: 2800 HCCGPHTCI 2808
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 CSAGHSC 8
C AGHSC
Sbjct: 355 CGAGHSC 361
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 CSAGHSC 8
C AGHSC
Sbjct: 355 CGAGHSC 361
>sp|YR815_MIMIV|PUTATIVE sel1-like repeat-containing protein R815|Acanthamoeba polyphaga
Query: 1 HCSAGHSCI 9
C GH CI
Sbjct: 246 QCKYGHGCI 254
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 2 CSAGHSC 8
CS GH C
Sbjct: 814 CSNGHMC 820
>sp|Y059_OSHVF|UNCHARACTERIZED protein ORF59|Ostreid herpesvirus 1 (isolate France)
Query: 2 CSAGHSCIF 10
CS SC+F
Sbjct: 722 CSVSGSCVF 730
>sp|TBP_ASFWA|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate
Query: 1 HCSAGHSCI 9
+C+ GH C+
Sbjct: 52 NCNFGHQCL 60
>sp|TBP_ASFP4|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate
Query: 1 HCSAGHSCI 9
+C+ GH C+
Sbjct: 52 NCNFGHQCL 60
>sp|TBP_ASFM2|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate
Query: 1 HCSAGHSCI 9
+C+ GH C+
Sbjct: 52 NCNFGHQCL 60
>sp|TBP_ASFK5|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate
Query: 1 HCSAGHSCI 9
+C+ GH C+
Sbjct: 52 NCNFGHQCL 60
>sp|TBP_ASFB7|PUTATIVE TATA-binding protein pB263R|African swine fever virus (strain
Query: 1 HCSAGHSCI 9
+C+ GH C+
Sbjct: 52 NCNFGHQCL 60
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 HCSAGHSCI 9
H A H+C+
Sbjct: 1857 HAEAAHACL 1865
>sp|TBPL_MIMIV|TATA-BOX-BINDING protein-like|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 SAGHSCI 9
+ GHSC+
Sbjct: 279 TGGHSCV 285
>sp|PTPJ1_MDBVW|TYROSINE phosphatase-like protein J1|Microplitis demolitor bracovirus
Query: 1 HCSAGHSC 8
HCS SC
Sbjct: 4 HCSKNRSC 11
>sp|YR835_MIMIV|PUTATIVE ankyrin repeat protein R835|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 CSAGH 6
CSAGH
Sbjct: 199 CSAGH 203
>sp|LT_POVS1|LARGE T antigen|Simian virus 12 (strain wt100)
Query: 1 HCSAGHSCIF 10
H S GH+ +F
Sbjct: 189 HSSHGHNILF 198
>sp|NSP1_ROTPC|NON-STRUCTURAL protein 1|Rotavirus C (strain RVC/Pig/United States/Cowden/1980)
Query: 1 HCSAGHSC 8
HC H C
Sbjct: 53 HCGIKHKC 60
>sp|HN_SV41|HEMAGGLUTININ-NEURAMINIDASE virus 41 (SV41)
Query: 2 CSAGHSC 8
CSAG+ C
Sbjct: 449 CSAGNFC 455
15|Sequence|71|80|HSCIFTVSGT
>sp|CAPSD_TYMV|CAPSID protein|Turnip yellow mosaic virus
Query: 2 SCIFTVSGT 10
+CI TVSGT
Sbjct: 168 TCIITVSGT 176
>sp|CAPSD_TYMVA|CAPSID protein|Turnip yellow mosaic virus (isolate
Query: 2 SCIFTVSGT 10
+CI TVSGT
Sbjct: 168 TCIITVSGT 176
>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus
Query: 1 HSCIFTVSGT 10
H+C FT+ T
Sbjct: 1568 HACKFTIGKT 1577
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 3 CIFTVSG 9
C+F++SG
Sbjct: 440 CVFSISG 446
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 SCIFTVSG 9
+C+F++SG
Sbjct: 438 TCVFSLSG 445
>sp|NTP1_MYXVL|NUCLEOSIDE triphosphatase I|Myxoma virus (strain Lausanne) (MYXV)
Query: 2 SCIFTVSG 9
+C+F++SG
Sbjct: 439 TCVFSLSG 446
>sp|NTP1_RFVKA|NUCLEOSIDE triphosphatase I|Rabbit fibroma virus (strain Kasza)
Query: 2 SCIFTVSG 9
+C+F++SG
Sbjct: 439 TCVFSLSG 446
>sp|TGB3_ICRSV|MOVEMENT protein TGBp3|Indian citrus ringspot virus (isolate
Query: 3 CIFTVSG 9
CI TVSG
Sbjct: 27 CIITVSG 33
16|Sequence|76|85|TVSGTSSCCP
>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate
Query: 1 TVSGTSSCCP 10
TV GT C P
Sbjct: 2084 TVRGTEKCYP 2093
>sp|R1A_GLRV3|REPLICASE protein 1a|Grapevine leafroll-associated virus 3 (isolate
Query: 1 TVSGTSSCCP 10
TV GT C P
Sbjct: 2084 TVRGTEKCYP 2093
>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)
Query: 2 VSGTSSCCP 10
+ GTS CP
Sbjct: 909 IDGTSEDCP 917
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 VSGTSSCCP 10
+SG SS CP
Sbjct: 85 LSGNSSLCP 93
17|Sequence|81|90|SSCCPFPEAV
>sp|VIF_SIVS4|VIRION infectivity factor|Simian immunodeficiency virus (isolate
Query: 2 SCCPFPEA 9
SCC FP+A
Sbjct: 133 SCCKFPKA 140
>sp|VIF_SIVSP|VIRION infectivity factor|Simian immunodeficiency virus (isolate
Query: 2 SCCPFPEA 9
SCC FP+A
Sbjct: 133 SCCKFPKA 140
>sp|VIF_SIVM2|VIRION infectivity factor|Simian immunodeficiency virus (isolate Mm251)
Query: 2 SCCPFPEA 9
SCC FP A
Sbjct: 133 SCCKFPRA 140
>sp|VIF_SIVM1|VIRION infectivity factor|Simian immunodeficiency virus (isolate Mm142-83)
Query: 2 SCCPFPEA 9
SCC FP A
Sbjct: 133 SCCRFPRA 140
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P+A
Sbjct: 133 SCCNYPQA 140
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P+A
Sbjct: 133 SCCNYPQA 140
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P+A
Sbjct: 133 SCCNYPQA 140
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P+A
Sbjct: 133 SCCNYPQA 140
>sp|RDRP_ORSVC|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Korean
Query: 1 SSCCPFP 7
S+C PFP
Sbjct: 635 STCAPFP 641
>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore
Query: 1 SSCCPFP 7
S+C PFP
Sbjct: 635 STCAPFP 641
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P+A
Sbjct: 133 SCCNYPQA 140
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P+A
Sbjct: 133 SCCNYPQA 140
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P A
Sbjct: 133 SCCKYPRA 140
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P A
Sbjct: 133 SCCKYPRA 140
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 SSCCPFPE 8
++CC PE
Sbjct: 1207 AACCSLPE 1214
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 4 CPFPE 8
CPFP+
Sbjct: 178 CPFPD 182
>sp|MCE_VACCW|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 4 CPFPE 8
CPFP+
Sbjct: 178 CPFPD 182
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 4 CPFPE 8
CPFP+
Sbjct: 178 CPFPD 182
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 4 CPFPE 8
CPFP+
Sbjct: 178 CPFPD 182
>sp|MCE_SHEVK|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Sheeppox virus (strain
Query: 4 CPFPE 8
CPFP+
Sbjct: 178 CPFPD 182
>sp|MCE_MYXVU|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Myxoma virus (strain
Query: 4 CPFPE 8
CPFP+
Sbjct: 178 CPFPD 182
>sp|MCE_MYXVL|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Myxoma virus (strain
Query: 4 CPFPE 8
CPFP+
Sbjct: 178 CPFPD 182
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 4 CPFPE 8
CPFP+
Sbjct: 178 CPFPD 182
>sp|MCE_FOWPN|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Fowlpox virus (strain
Query: 4 CPFPE 8
CPFP+
Sbjct: 186 CPFPD 190
>sp|VE5_CRPVK|PROBABLE protein E5|Cottontail rabbit papillomavirus (strain Kansas)
Query: 2 SCCPFPEA 9
+C PFP A
Sbjct: 8 ACNPFPSA 15
>sp|YR734_MIMIV|PUTATIVE ankyrin repeat protein R734|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 CCPF 6
CCPF
Sbjct: 436 CCPF 439
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 SSCCPFPE 8
++CC PE
Sbjct: 1207 AACCSLPE 1214
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 SSCCPF 6
+ CCPF
Sbjct: 1366 AKCCPF 1371
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 SSCCPF 6
+ CCPF
Sbjct: 1366 AKCCPF 1371
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 SSCCPF 6
+ CCPF
Sbjct: 1362 AKCCPF 1367
>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P A
Sbjct: 133 SCCNYPRA 140
>sp|1A_PZSVT|REPLICATION protein 1a|Pelargonium zonate spot virus (isolate
Query: 2 SCCPFPEA 9
SCCP +A
Sbjct: 123 SCCPVLDA 130
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 SSCCPF 6
+ CCPF
Sbjct: 1359 ARCCPF 1364
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 CCPF 6
CCPF
Sbjct: 696 CCPF 699
>sp|VE5_CRPVW|PROBABLE protein E5|Cottontail rabbit papillomavirus (strain Washington
Query: 2 SCCPFPEA 9
+C PFP A
Sbjct: 8 ACNPFPSA 15
>sp|VP3_NCMV|PROTEIN 3|Northern cereal mosaic virus (NCMV)
Query: 2 SCCPFPEA 9
SCCP E
Sbjct: 100 SCCPLEEG 107
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 3 CCPFPEAV 10
CC P+AV
Sbjct: 111 CCTGPDAV 118
>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus
Query: 2 SCCPFPEAV 10
+C P PEA
Sbjct: 268 NCLPLPEAT 276
18|Sequence|86|95|FPEAVACGDG
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 FPEAVACGDG 10
FP V+C DG
Sbjct: 366 FPSVVSCRDG 375
>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus
Query: 1 FPEAVACGDG 10
+ +A+ CGDG
Sbjct: 1648 YQDAIGCGDG 1657
>sp|YR710_MIMIV|UNCHARACTERIZED protein R710|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 PEAVACG 8
PEA +CG
Sbjct: 66 PEATSCG 72
>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)
Query: 2 PEAVACGDG 10
PE +AC G
Sbjct: 342 PEQIACAHG 350
>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United
Query: 2 PEAVACGDG 10
PE +AC G
Sbjct: 341 PEQIACAHG 349
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 FPEAVAC 7
FPE VAC
Sbjct: 277 FPEIVAC 283
>sp|PKG3_ADEB3|PACKAGING protein 3|Bovine adenovirus B serotype 3
Query: 2 PEAVACGDG 10
P V CG+G
Sbjct: 36 PPGVECGEG 44
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 FPEAVACGDG 10
+ + +ACGDG
Sbjct: 1663 YHDFLACGDG 1672
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 FPEAVACGDG 10
+ + +ACGDG
Sbjct: 1663 YHDFLACGDG 1672
>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)
Query: 2 PEAVACGDG 10
P+ V CG G
Sbjct: 4070 PDFVVCGKG 4078
>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)
Query: 2 PEAVACGDG 10
P+ V CG G
Sbjct: 4195 PDFVVCGKG 4203
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 2 PEAVACGDG 10
P+ V CG G
Sbjct: 4070 PDFVVCGKG 4078
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 2 PEAVACGDG 10
P+ V CG G
Sbjct: 4195 PDFVVCGKG 4203
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 AVACGDG 10
AV CGDG
Sbjct: 829 AVRCGDG 835
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 AVACGDG 10
AV CGDG
Sbjct: 829 AVRCGDG 835
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 AVACGDG 10
AV CGDG
Sbjct: 829 AVRCGDG 835
>sp|RPC1_BPPH8|REPRESSOR protein CI|Enterobacteria phage phi80 (Bacteriophage phi-80)
Query: 6 ACGDG 10
ACGDG
Sbjct: 110 ACGDG 114
19|Sequence|91|100|ACGDGHHCCP
>sp|VG46_ICHVA|PROBABLE major glycoprotein|Ictalurid herpesvirus 1 (strain Auburn)
Query: 2 CGDGHHCCP 10
CG+ H CP
Sbjct: 461 CGEPHRQCP 469
>sp|NSP1_ROTSP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A)
Query: 5 GHHCCP 10
GHHC P
Sbjct: 302 GHHCQP 307
>sp|NSP1_ROTSH|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Monkey/South
Query: 5 GHHCCP 10
GHHC P
Sbjct: 303 GHHCQP 308
>sp|NSP1_ROTSF|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/SA11-FEM/G3P6[1]) (RV-A)
Query: 5 GHHCCP 10
GHHC P
Sbjct: 303 GHHCQP 308
>sp|NSP1_ROTS4|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/SA11-4F/G3P6[1]) (RV-A)
Query: 5 GHHCCP 10
GHHC P
Sbjct: 303 GHHCQP 308
>sp|NSP1_ROTS1|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)
Query: 5 GHHCCP 10
GHHC P
Sbjct: 302 GHHCQP 307
>sp|NSP1_ROTD9|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Dog/United
Query: 5 GHHCCP 10
GHHC P
Sbjct: 300 GHHCKP 305
>sp|NSP1_ROTF6|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cat/Japan/FRV64/1989/G3P5B[3])
Query: 5 GHHCCP 10
GHHC P
Sbjct: 300 GHHCKP 305
>sp|VP7_RRSVT|MICROTUBULE-ASSOCIATED protein VP7|Rice ragged stunt virus (isolate
Query: 2 CGDGH 6
CGDGH
Sbjct: 257 CGDGH 261
>sp|TBP_ASFM2|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate
Query: 2 CGDGHHCCP 10
C GH C P
Sbjct: 53 CNFGHQCLP 61
>sp|TBP_ASFK5|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate
Query: 2 CGDGHHCCP 10
C GH C P
Sbjct: 53 CNFGHQCLP 61
>sp|NSP1_ROTEL|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Equine/United
Query: 5 GHHCCP 10
GHHC P
Sbjct: 300 GHHCKP 305
>sp|MYBE_AVILE|P135GAG-MYB-ETS-TRANSFORMING protein|Avian leukemia virus E26
Query: 3 GDGHHCCP 10
G+ HHC P
Sbjct: 164 GEHHHCTP 171
>sp|TBP_ASFB7|PUTATIVE TATA-binding protein pB263R|African swine fever virus (strain
Query: 2 CGDGHHCCP 10
C GH C P
Sbjct: 53 CNFGHQCLP 61
>sp|NSP1_ROTTU|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Monkey/United
Query: 5 GHHCCP 10
GHHC P
Sbjct: 300 GHHCKP 305
>sp|TBP_ASFWA|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate
Query: 2 CGDGHHCCP 10
C GH C P
Sbjct: 53 CNFGHQCLP 61
>sp|TBP_ASFP4|PUTATIVE TATA-binding protein pB263R|African swine fever virus (isolate
Query: 2 CGDGHHCCP 10
C GH C P
Sbjct: 53 CNFGHQCLP 61
>sp|YL062_MIMIV|PUTATIVE ankyrin repeat protein L62|Acanthamoeba polyphaga mimivirus
Query: 1 ACGDGH 6
ACG+GH
Sbjct: 83 ACGNGH 88
>sp|NSP1_ROTRH|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Monkey/United
Query: 5 GHHCCP 10
GHHC P
Sbjct: 302 GHHCKP 307
>sp|YL788_MIMIV|PUTATIVE BTB/POZ domain-containing protein L788|Acanthamoeba polyphaga
Query: 2 CGDGHHCC 9
CGD + CC
Sbjct: 307 CGDIYVCC 314
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 GHHCC 9
GH+CC
Sbjct: 436 GHYCC 440
>sp|PG153_VACCW|ENVELOP protein OPG153|Vaccinia virus (strain Western Reserve)
Query: 5 GHHCC 9
GH+CC
Sbjct: 438 GHYCC 442
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 5 GHHCC 9
GH+CC
Sbjct: 447 GHYCC 451
>sp|NSP4_RDVF|NON-STRUCTURAL protein 4|Rice dwarf virus (isolate Fujian)
Query: 4 DGHHCC 9
DGHH C
Sbjct: 330 DGHHRC 335
>sp|NSP4_RDVA|NON-STRUCTURAL protein 4|Rice dwarf virus (isolate Akita)
Query: 4 DGHHCC 9
DGHH C
Sbjct: 330 DGHHRC 335
>sp|MYB_AVIMB|TRANSFORMING protein Myb|Avian myeloblastosis virus (AMV)
Query: 3 GDGHHCCP 10
G+ HHC P
Sbjct: 278 GEHHHCTP 285
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 347 CGEGHSC 353
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 346 CGEGHSC 352
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 346 CGEGHSC 352
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 347 CGEGHSC 353
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 346 CGEGHSC 352
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 347 CGEGHSC 353
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 347 CGEGHSC 353
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 ACGDGH 6
ACGD H
Sbjct: 519 ACGDAH 524
>sp|RIR1_GAHVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Gallid herpesvirus 2 (strain
Query: 2 CGDGHHCC 9
CGDG C
Sbjct: 810 CGDGELTC 817
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 ACGDGH 6
ACGD H
Sbjct: 519 ACGDAH 524
>sp|RDRP_PVXX3|RNA replication protein|Potato virus X (strain X3)
Query: 6 HHCCP 10
HHC P
Sbjct: 1264 HHCIP 1268
>sp|RDRP_PVXHB|RNA replication protein|Potato virus X (strain HB)
Query: 6 HHCCP 10
HHC P
Sbjct: 1264 HHCIP 1268
>sp|RDRP_PVXCP|RNA replication protein|Potato virus X (strain CP)
Query: 6 HHCCP 10
HHC P
Sbjct: 1264 HHCIP 1268
>sp|RDRP_PVX|RNA replication protein|Potato virus X (PVX)
Query: 6 HHCCP 10
HHC P
Sbjct: 1264 HHCIP 1268
>sp|RPC1_BPPH8|REPRESSOR protein CI|Enterobacteria phage phi80 (Bacteriophage phi-80)
Query: 1 ACGDG 5
ACGDG
Sbjct: 110 ACGDG 114
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 ACGDG 5
ACGDG
Sbjct: 1668 ACGDG 1672
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 ACGDG 5
ACGDG
Sbjct: 1668 ACGDG 1672
>sp|Y102_AFV1Y|UNCHARACTERIZED protein ORF102|Acidianus filamentous virus 1 (isolate
Query: 2 CGDGHHC 8
C D +HC
Sbjct: 56 CSDCYHC 62
>sp|UL64_HCMVA|UNCHARACTERIZED protein UL64|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GHHC 8
GHHC
Sbjct: 81 GHHC 84
>sp|ORFA_ELHVK|PROTEIN ORF A|Elephantid herpesvirus 1 (isolate Asian
Query: 6 HHCCP 10
HH CP
Sbjct: 416 HHTCP 420
>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate
Query: 2 CGDGHH 7
CGDG H
Sbjct: 1880 CGDGLH 1885
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 CGDGHHC 8
CGDG C
Sbjct: 354 CGDGQFC 360
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 CGDGHHC 8
CGDG C
Sbjct: 354 CGDGQFC 360
>sp|SPIKE_CVMJH|SPIKE glycoprotein|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 CGDGHH 7
CG+G+H
Sbjct: 1004 CGNGNH 1009
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 5 GHHCC 9
GH CC
Sbjct: 161 GHECC 165
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 CGDGHHC 8
CGDG+ C
Sbjct: 356 CGDGYFC 362
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 CGDGHHC 8
CGDG+ C
Sbjct: 356 CGDGYFC 362
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 5 GHHCC 9
GH CC
Sbjct: 161 GHECC 165
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CGDGHH 7
CG+G+H
Sbjct: 1127 CGNGNH 1132
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 2 CGDGHHC 8
CGDG+ C
Sbjct: 22 CGDGYFC 28
20|Sequence|96|105|HHCCPRGFHC
>sp|ENV_SIVMB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate MB66)
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 240 HYCAPAGF 247
>sp|ENV_SIVCZ|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate CPZ
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 214 HYCAPAGF 221
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 217 HYCAPAGF 224
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 228 HYCAPAGF 235
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 218 HYCAPAGF 225
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 217 HYCAPAGF 224
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 212 HYCAPAGF 219
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 213 HYCAPAGF 220
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 219 HYCAPAGF 226
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 212 HYCAPAGF 219
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 217 HYCAPAGF 224
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 210 HYCAPAGF 217
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 214 HYCAPAGF 221
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 221 HYCAPAGF 228
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 214 HYCAPAGF 221
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 221 HYCAPAGF 228
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 217 HYCAPAGF 224
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 214 HYCAPAGF 221
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 228 HYCAPAGF 235
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 217 HYCAPAGF 224
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 221 HYCAPAGF 228
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 214 HYCAPAGF 221
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 224 HYCAPAGF 231
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 218 HYCAPAGF 225
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 209 HYCAPAGF 216
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 227 HYCTPTGF 234
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 218 HYCVPAGF 225
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 229 HYCTPAGF 236
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 221 HYCTPAGF 228
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 223 HYCTPAGF 230
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 219 HYCTPAGF 226
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 209 HYCAPPGF 216
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 208 HYCAPPGF 215
>sp|FUS_NPVOP|MAJOR envelope glycoprotein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 HHCCPRGFHC 10
HH C R + C
Sbjct: 152 HHTCNRSWRC 161
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 211 HYCAPAGF 218
>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CPRGF 8
CPRGF
Sbjct: 255 CPRGF 259
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CPRGF 8
CPRGF
Sbjct: 257 CPRGF 261
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 216 HYCAPTGY 223
>sp|NS4_BANNV|NON-STRUCTURAL protein 4|Banna virus (BAV)
Query: 2 HCCPRGFHC 10
+CCP F C
Sbjct: 9 NCCPGRFVC 17
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H C P GF
Sbjct: 211 HFCAPAGF 218
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 213 HYCAPAGF 220
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 207 HYCAPAGY 214
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 216 HYCAPAGY 223
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 213 HYCAPAGY 220
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 212 HYCAPAGY 219
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 218 HYCAPAGY 225
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 214 HYCAPAGY 221
>sp|RIR2_BHV1C|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Bovine herpesvirus 1.1 (strain Cooper)
Query: 3 CCPRGFH 9
C PRG H
Sbjct: 242 CAPRGSH 248
>sp|C2_BCTVC|PROTEIN C2|Beet curly top virus (strain
Query: 1 HHCCPRGF 8
HH C RGF
Sbjct: 76 HHECNRGF 83
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 HHCCPRGFH 9
HH PRG H
Sbjct: 1559 HHRRPRGRH 1567
>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)
Query: 1 HHCCP 5
H CCP
Sbjct: 138 HSCCP 142
>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)
Query: 1 HHCCP 5
H CCP
Sbjct: 138 HSCCP 142
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HHCCPRGFHC 10
HH PRG C
Sbjct: 153 HHTFPRGALC 162
>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate
Query: 1 HHCCP 5
H CCP
Sbjct: 246 HSCCP 250
>sp|1A_OLV2I|REPLICATION protein 1a|Olive latent virus 2 (isolate
Query: 1 HHCCP 5
H CCP
Sbjct: 116 HSCCP 120
>sp|ORFA_ELHVK|PROTEIN ORF A|Elephantid herpesvirus 1 (isolate Asian
Query: 1 HHCCPR 6
HH CP+
Sbjct: 416 HHTCPK 421
>sp|1A_TOBSV|REPLICATION protein 1a|Tobacco streak virus (strain WC)
Query: 1 HHCCP 5
H CCP
Sbjct: 141 HSCCP 145
>sp|NEC1_EHV2|NUCLEAR egress protein 1|Equine herpesvirus 2 (strain 86/87)
Query: 2 HCCPRGFHC 10
H C GF+C
Sbjct: 112 HACNMGFYC 120
>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)
Query: 3 CCPRGF 8
CCP G+
Sbjct: 446 CCPGGY 451
>sp|1A_PZSVT|REPLICATION protein 1a|Pelargonium zonate spot virus (isolate
Query: 1 HHCCP 5
H CCP
Sbjct: 122 HSCCP 126
>sp|1A_BBMV|REPLICATION protein 1a|Broad bean mottle virus
Query: 1 HHCCP 5
H CCP
Sbjct: 123 HSCCP 127
>sp|1A_CCMV|REPLICATION protein 1a|Cowpea chlorotic mottle virus (CCMV)
Query: 1 HHCCP 5
H CCP
Sbjct: 123 HSCCP 127
>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)
Query: 1 HHCCP 5
H CCP
Sbjct: 1533 HWCCP 1537
>sp|TRM3_EHV1V|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain V592)
Query: 1 HHCCPRG 7
+HC P G
Sbjct: 620 YHCTPHG 626
>sp|TRM3_EHV1B|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain Ab4p)
Query: 1 HHCCPRG 7
+HC P G
Sbjct: 620 YHCTPHG 626
>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 HCCPRGFH 9
HC GFH
Sbjct: 2251 HCVSLGFH 2258
>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 HCCPRGFH 9
HC GFH
Sbjct: 2234 HCVSLGFH 2241
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 CCPRGFHC 10
CCP HC
Sbjct: 918 CCPYCRHC 925
>sp|1A_BMV|REPLICATION protein 1a|Brome mosaic virus (BMV)
Query: 1 HHCCP 5
H CCP
Sbjct: 123 HSCCP 127
>sp|TLP20_NPVOP|TELOKIN-LIKE protein 20 homolog|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 2 HCCPRGFH 9
HC RG H
Sbjct: 35 HCLMRGAH 42
>sp|E3145_ADE06|EARLY E3B 14 kDa protein|Human adenovirus C serotype 6
Query: 2 HCCPRGFHC 10
H C RG C
Sbjct: 42 HQCKRGIFC 50
>sp|E3145_ADE02|EARLY 3 14.7 kDa protein|Human adenovirus C serotype 2
Query: 2 HCCPRGFHC 10
H C RG C
Sbjct: 42 HQCKRGIFC 50
>sp|VCLAP_EHV2|CARD domain-containing protein E10|Equine herpesvirus 2 (strain 86/87)
Query: 5 PRGFHC 10
PRGF C
Sbjct: 84 PRGFQC 89
21|Sequence|101|110|RGFHCSADGR
>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)
Query: 1 RGFHCSADGR 10
RGF +DGR
Sbjct: 1928 RGFRVESDGR 1937
>sp|VP03_SHV21|PROBABLE membrane antigen 3|Saimiriine herpesvirus 2 (strain 11)
Query: 5 CSADGR 10
CSADGR
Sbjct: 1176 CSADGR 1181
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 1 RGFHCSA 7
R FHC+A
Sbjct: 591 RTFHCTA 597
>sp|IBMP_CAMVW|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain W260)
Query: 2 GFHCSA 7
GFHC A
Sbjct: 453 GFHCPA 458
>sp|IBMP_CAMVS|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain Strasbourg)
Query: 2 GFHCSA 7
GFHC A
Sbjct: 453 GFHCPA 458
>sp|IBMP_CAMVP|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain PV147)
Query: 2 GFHCSA 7
GFHC A
Sbjct: 453 GFHCPA 458
>sp|IBMP_CAMVJ|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain S-Japan)
Query: 2 GFHCSA 7
GFHC A
Sbjct: 453 GFHCPA 458
>sp|IBMP_CAMVE|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain BBC)
Query: 2 GFHCSA 7
GFHC A
Sbjct: 453 GFHCPA 458
>sp|IBMP_CAMVD|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain D/H)
Query: 2 GFHCSA 7
GFHC A
Sbjct: 453 GFHCPA 458
>sp|IBMP_CAMVC|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain CM-1841)
Query: 2 GFHCSA 7
GFHC A
Sbjct: 453 GFHCPA 458
>sp|IBMP_CAMV4|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain D4)
Query: 2 GFHCSA 7
GFHC A
Sbjct: 453 GFHCPA 458
>sp|VE6_BPV5|PROTEIN E6|Bovine papillomavirus type 5
Query: 1 RGFHCSADGR 10
R + CS+DGR
Sbjct: 120 RCYSCSSDGR 129
>sp|GLYC_ALLVP|PRE-GLYCOPROTEIN polyprotein GP complex|Allpahuayo mammarenavirus (isolate
Query: 4 HCSADGR 10
HC+ DG+
Sbjct: 215 HCTMDGK 221
>sp|005L_IIV3|UNCHARACTERIZED protein 005L|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 RGFHCSADG 9
R HCS+DG
Sbjct: 50 RCAHCSSDG 58
22|Sequence|106|115|SADGRSCFQR
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 3 DGRSCFQR 10
DG SC++R
Sbjct: 2522 DGSSCYER 2529
>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 3 DGRSCFQR 10
DG SC++R
Sbjct: 2529 DGSSCYER 2536
>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 3 DGRSCFQR 10
DG SC++R
Sbjct: 2522 DGSSCYER 2529
>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 3 DGRSCFQR 10
DG SC++R
Sbjct: 2529 DGSSCYER 2536
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 3 DGRSCFQ 9
DGR C+Q
Sbjct: 39 DGRYCYQ 45
>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)
Query: 3 DGRSCF 8
DG+SCF
Sbjct: 162 DGKSCF 167
>sp|RDRP_SJNNV|RNA-DIRECTED RNA polymerase|Striped jack nervous necrosis virus
Query: 2 ADGRSCFQR 10
ADGR+C R
Sbjct: 914 ADGRACRSR 922
>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 SADGRSCFQR 10
S GRSC+ +
Sbjct: 653 SKPGRSCYSK 662
>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 SADGRSCFQR 10
S GRSC+ +
Sbjct: 653 SKPGRSCYSK 662
>sp|V18K_MLVAB|18 kDa protein|Abelson murine leukemia virus
Query: 1 SADGRSCFQ 9
S+DG SC Q
Sbjct: 77 SSDGPSCHQ 85
>sp|HEMA_I49A1|HEMAGGLUTININ A virus (strain A/Duck/Germany/1949
Query: 3 DGRSCFQ 9
DG+ CF+
Sbjct: 473 DGKGCFE 479
>sp|HEMA_I49A0|HEMAGGLUTININ A virus (strain A/Chicken/Germany/n/1949
Query: 3 DGRSCFQ 9
DG+ CF+
Sbjct: 473 DGKGCFE 479
23|Sequence|111|120|SCFQRSGNNS
>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)
Query: 1 SCFQRSGN 8
+CFQR G+
Sbjct: 249 ACFQRDGD 256
>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)
Query: 1 SCFQRSGN 8
+CFQR G+
Sbjct: 249 ACFQRDGD 256
>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh
Query: 1 SCFQRSGN 8
+CFQR G+
Sbjct: 249 ACFQRDGD 256
>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh
Query: 1 SCFQRSGN 8
+CFQR G+
Sbjct: 249 ACFQRDGD 256
>sp|NEC2_PSHV1|NUCLEAR egress protein 2|Psittacid herpesvirus 1 (isolate Amazon
Query: 2 CFQRSGNN 9
CF R G N
Sbjct: 142 CFYRGGKN 149
24|Sequence|116|125|SGNNSVGAIQ
>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)
Query: 1 SGNNSVGAIQ 10
S NN++GAIQ
Sbjct: 1012 SFNNAIGAIQ 1021
>sp|VIF_SIVMB|VIRION infectivity factor|Simian immunodeficiency virus (isolate MB66)
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 TGHNKVGSLQ 146
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNQVGSLQ 146
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1SC|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 54 AGHNKVGSLQ 63
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 138 AGHNKVGSLQ 147
>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 138 AGHNKVGSLQ 147
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV192|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 3 NNSVGAIQ 10
NN++GAIQ
Sbjct: 1022 NNALGAIQ 1029
>sp|SPIKE_CVMJC|SPIKE glycoprotein|Murine coronavirus (strain JHMV /
Query: 3 NNSVGAIQ 10
NN++GAIQ
Sbjct: 1030 NNALGAIQ 1037
>sp|SPIKE_CVM4|SPIKE glycoprotein|Murine coronavirus (strain 4) (MHV-4)
Query: 3 NNSVGAIQ 10
NN++GAIQ
Sbjct: 1030 NNALGAIQ 1037
>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 3 NNSVGAIQ 10
NN++GAIQ
Sbjct: 1022 NNALGAIQ 1029
>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)
Query: 3 NNSVGAIQ 10
NN++GAIQ
Sbjct: 1022 NNALGAIQ 1029
>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)
Query: 3 NNSVGAIQ 10
NN++GAIQ
Sbjct: 1022 NNALGAIQ 1029
>sp|SPIKE_CVMJH|SPIKE glycoprotein|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 3 NNSVGAIQ 10
NN++GAIQ
Sbjct: 889 NNALGAIQ 896
>sp|SPIKE_CVMA5|SPIKE glycoprotein|Murine coronavirus (strain A59) (MHV-A59)
Query: 3 NNSVGAIQ 10
NN++GAIQ
Sbjct: 978 NNALGAIQ 985
25|Sequence|121|130|VGAIQCPDSQ
>sp|PRO_ADEG8|PROTEASE adenovirus 8 (strain ATCC
Query: 1 VGAIQCPDS 9
V A+QCP S
Sbjct: 111 VEAVQCPCS 119
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 3 AIQCPDSQ 10
A +CPD Q
Sbjct: 436 ATRCPDKQ 443
>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AIQCPDSQ 10
A++CPD +
Sbjct: 55 ALRCPDGE 62
>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AIQCPDSQ 10
A++CPD +
Sbjct: 55 ALRCPDGE 62
26|Sequence|126|135|CPDSQFECPD
>sp|YR125_MIMIV|UNCHARACTERIZED Bro-N domain-containing protein R125|Acanthamoeba polyphaga
Query: 4 SQFECP 9
SQF+CP
Sbjct: 48 SQFQCP 53
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 1 CPDSQFECPD 10
C DSQ +C D
Sbjct: 161 CSDSQIDCSD 170
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 PDSQFEC 8
P+SQ++C
Sbjct: 346 PESQYQC 352
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 PDSQFEC 8
P+SQ++C
Sbjct: 346 PESQYQC 352
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 2 PDSQFEC 8
P+SQ++C
Sbjct: 346 PESQYQC 352
>sp|VIE3_MUHVS|IMMEDIATE-EARLY protein 3|Murid herpesvirus 1 (strain Smith)
Query: 1 CPDSQFECP 9
P S++ECP
Sbjct: 306 APSSRYECP 314
>sp|PG031_VAR67|PROTEIN C4|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CPDSQFECPD 10
C D FE PD
Sbjct: 224 CMDHIFELPD 233
>sp|POLG_AEVCA|GENOME polyprotein|Avian encephalomyelitis virus (strain Calnek
Query: 1 CPDSQFECP 9
CP +CP
Sbjct: 1679 CPQEVIKCP 1687
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CPDSQFECP 9
CP F CP
Sbjct: 1029 CPRGGFICP 1037
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CPDSQFECP 9
CP F CP
Sbjct: 1029 CPRGGFICP 1037
>sp|POLG_AEVL2|GENOME polyprotein|Avian encephalomyelitis virus (strain L2Z)
Query: 1 CPDSQFECP 9
CP +CP
Sbjct: 1679 CPQKVIKCP 1687
>sp|TERM_ADECR|PRETERMINAL protein|Canine adenovirus serotype 1 (strain
Query: 2 PDSQFEC 8
PDS F+C
Sbjct: 27 PDSYFKC 33
>sp|RDRP_PEMVW|PROTEIN P1-P2|Pea enation mosaic virus-1 (strain
Query: 1 CPDSQFECP 9
CP + ++CP
Sbjct: 717 CPFTVYKCP 725
27|Sequence|131|140|FECPDFSTCC
>sp|VP4A_LNYV3|PHOSPHOPROTEIN necrotic yellows virus (isolate
Query: 2 ECPDFST 8
ECPDF T
Sbjct: 33 ECPDFDT 39
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 3 CPDFST 8
CPDFST
Sbjct: 150 CPDFST 155
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 2 ECPDFSTC 9
+CP F+TC
Sbjct: 492 QCPRFNTC 499
>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus
Query: 1 FECPDF 6
F CPDF
Sbjct: 1278 FNCPDF 1283
>sp|UNG_FOWPN|URACIL-DNA glycosylase|Fowlpox virus (strain NVSL) (FPV)
Query: 1 FECPDFS 7
FE PDFS
Sbjct: 79 FESPDFS 85
>sp|TERL_BPP22|TERMINASE, large subunit|Salmonella phage P22 (Bacteriophage P22)
Query: 1 FECPD 5
FECPD
Sbjct: 308 FECPD 312
>sp|TERL_BPLP7|TERMINASE, large subunit|Enterobacteria phage LP7 (Bacteriophage LP7)
Query: 1 FECPD 5
FECPD
Sbjct: 304 FECPD 308
>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum
Query: 2 ECPDF 6
ECPDF
Sbjct: 1992 ECPDF 1996
>sp|POL_RTBVP|POLYPROTEIN P3|Rice tungro bacilliform virus (isolate
Query: 1 FECPDFS 7
+ CPDF+
Sbjct: 166 YSCPDFA 172
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 CPDFS 7
CPDFS
Sbjct: 556 CPDFS 560
>sp|POL2_TRSV|RNA2 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)
Query: 4 PDFSTCC 10
P F TCC
Sbjct: 222 PAFMTCC 228
>sp|OE66_NPVAC|NON-SULFATED chondroitin lyase E66|Autographa californica nuclear polyhedrosis
Query: 4 PDFSTCC 10
PDF T C
Sbjct: 121 PDFGTVC 127
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 CPDFS 7
CPDFS
Sbjct: 557 CPDFS 561
>sp|YR096_MIMIV|PUTATIVE ankyrin repeat protein R96|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 PDFSTCC 10
PD TCC
Sbjct: 234 PDEKTCC 240
>sp|YL236_MIMIV|UNCHARACTERIZED protein L236|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 PDFSTCC 10
P+FST C
Sbjct: 4 PNFSTIC 10
>sp|VG88_BPML5|GENE 88 protein|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 1 FECPDFSTCC 10
F CPD + C
Sbjct: 40 FSCPDATAFC 49
>sp|CAPSD_NODAM|CAPSID protein alpha|Nodamura virus (strain Mag115) (NoV)
Query: 1 FECPDFST 8
F PDFST
Sbjct: 63 FASPDFST 70
>sp|Y113_OSHVF|UNCHARACTERIZED protein ORF113|Ostreid herpesvirus 1 (isolate France)
Query: 1 FECPDFSTCC 10
F C D +CC
Sbjct: 151 FSCIDSLSCC 160
>sp|VG16_SHV21|BCL-2-LIKE gene 16 protein|Saimiriine herpesvirus 2 (strain 11)
Query: 4 PDFSTC 9
PDFS C
Sbjct: 46 PDFSLC 51
>sp|YR592_MIMIV|PUTATIVE helicase R592|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 FECPDFSTCC 10
FE P CC
Sbjct: 458 FENPTIMNCC 467
>sp|NPH2_RFVKA|RNA helicase NPH-II|Rabbit fibroma virus (strain Kasza)
Query: 1 FECPDFSTC 9
FEC + TC
Sbjct: 103 FECYSYLTC 111
>sp|VG88_BPMD2|GENE 88 protein|Mycobacterium phage D29 (Mycobacteriophage D29)
Query: 1 FECPDFSTCC 10
F CPD + C
Sbjct: 40 FSCPDATAFC 49
>sp|YL101_MIMIV|UNCHARACTERIZED protein L101|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 FECPDFSTC 9
+ PDF TC
Sbjct: 204 LKVPDFYTC 212
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 1 FECPDFSTCC 10
F+CPD S C
Sbjct: 5586 FKCPDTSYCL 5595
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 1 FECPDFSTCC 10
F+CPD S C
Sbjct: 5462 FKCPDTSYCL 5471
>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain
Query: 3 CPDFSTCC 10
C DF T C
Sbjct: 3255 CKDFDTYC 3262
>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain
Query: 3 CPDFSTCC 10
C DF T C
Sbjct: 3258 CKDFDTYC 3265
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 FECPDFS 7
F CPDF+
Sbjct: 883 FSCPDFT 889
>sp|VF466_IIV6|UNCHARACTERIZED protein 466R|Invertebrate iridescent virus 6 (IIV-6)
Query: 1 FECPDFST 8
+ CPD ST
Sbjct: 45 YNCPDVST 52
>sp|Y077_OSHVF|UNCHARACTERIZED protein ORF77|Ostreid herpesvirus 1 (isolate France)
Query: 2 ECPDFSTCC 10
EC D T C
Sbjct: 748 ECKDIPTAC 756
28|Sequence|136|145|FSTCCVMVDG
>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)
Query: 1 FSTCCVMVD 9
+++CCV +D
Sbjct: 602 YTSCCVTLD 610
>sp|MVP_BTMV|P3N-PIPO polyprotein|Beet mosaic virus (BtMV)
Query: 1 FSTCCVMVD 9
+++CCV +D
Sbjct: 602 YTSCCVTLD 610
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 STCCVM 7
STCCV+
Sbjct: 101 STCCVL 106
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 STCCVM 7
STCCV+
Sbjct: 101 STCCVL 106
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TCCVMVD 9
TCCV+ D
Sbjct: 445 TCCVITD 451
>sp|VF179_IIV3|UNCHARACTERIZED protein 035R|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 FSTCCVMVDG 10
FS CC ++ G
Sbjct: 685 FSLCCALLLG 694
>sp|1002L_ASFM2|PROTEIN MGF 100-2L|African swine fever virus (isolate
Query: 5 CVMVDG 10
C+M+DG
Sbjct: 110 CIMIDG 115
>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 2 STCCVMVD 9
S CCV +D
Sbjct: 602 SCCCVTMD 609
>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 2 STCCVMVD 9
S CCV +D
Sbjct: 602 SCCCVTMD 609
>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 2 STCCVMVD 9
S CCV +D
Sbjct: 599 SCCCVTMD 606
>sp|MVP_ZYMVS|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain
Query: 2 STCCVMVD 9
S CCV +D
Sbjct: 602 SCCCVTMD 609
>sp|MVP_ZYMVR|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain
Query: 2 STCCVMVD 9
S CCV +D
Sbjct: 602 SCCCVTMD 609
>sp|MVP_ZYMVC|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain
Query: 2 STCCVMVD 9
S CCV +D
Sbjct: 599 SCCCVTMD 606
>sp|US426_GAHVG|UNCHARACTERIZED 15.7 kDa protein|Gallid herpesvirus 2 (strain GA)
Query: 1 FSTCCVMV 8
F TCC+ V
Sbjct: 32 FETCCIDV 39
29|Sequence|141|150|VMVDGSWGCC
>sp|1A_BBMV|REPLICATION protein 1a|Broad bean mottle virus
Query: 1 VMVDGSWGC 9
VMVDG GC
Sbjct: 686 VMVDGVAGC 694
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 MVDGSWGC 9
+V G WGC
Sbjct: 75 VVKGCWGC 82
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 2 MVDGSWGC 9
+V G WGC
Sbjct: 74 VVKGCWGC 81
>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)
Query: 4 DGSWGCC 10
+ +WGCC
Sbjct: 422 NNTWGCC 428
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 3 VDGSWGC 9
+ GSWGC
Sbjct: 363 LQGSWGC 369
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 3 VDGSWGC 9
+ GSWGC
Sbjct: 363 LQGSWGC 369
>sp|RDRP_RRSVT|RNA-DIRECTED RNA polymerase|Rice ragged stunt virus (isolate
Query: 4 DGSWGC 9
DG+W C
Sbjct: 881 DGTWTC 886
>sp|VE1_OVPVD|REPLICATION protein E1|Odocoileus virginianus papillomavirus 1 (DPV)
Query: 6 SWGCC 10
SW CC
Sbjct: 91 SWACC 95
>sp|YO01_BPL2|UNCHARACTERIZED 66.6 kDa protein|Acholeplasma phage L2 (Bacteriophage L2)
Query: 3 VDGSWG 8
+DG WG
Sbjct: 207 IDGQWG 212
>sp|REP_PASVK|REPLICATION-ASSOCIATED protein|Panicum streak virus (isolate Kenya)
Query: 4 DGSWGC 9
DG+W C
Sbjct: 63 DGTWHC 68
>sp|REPA_PASVK|REPLICATION-ASSOCIATED protein A|Panicum streak virus (isolate Kenya)
Query: 4 DGSWGC 9
DG+W C
Sbjct: 63 DGTWHC 68
>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)
Query: 1 VMVDGSWGC 9
V+VDG GC
Sbjct: 819 VLVDGVPGC 827
>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)
Query: 1 VMVDGSWGC 9
V+VDG GC
Sbjct: 829 VLVDGVPGC 837
>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)
Query: 1 VMVDGSWGC 9
V+VDG GC
Sbjct: 829 VLVDGVPGC 837
>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh
Query: 1 VMVDGSWGC 9
V+VDG GC
Sbjct: 829 VLVDGVPGC 837
>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh
Query: 1 VMVDGSWGC 9
V+VDG GC
Sbjct: 829 VLVDGVPGC 837
>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)
Query: 1 VMVDGSWGC 9
V+VDG GC
Sbjct: 829 VLVDGVPGC 837
>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)
Query: 1 VMVDGSWGC 9
V+VDG GC
Sbjct: 829 VLVDGVPGC 837
>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean
Query: 1 VMVDGSWGC 9
V+VDG GC
Sbjct: 829 VLVDGVPGC 837
>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)
Query: 1 VMVDGSWGC 9
V+VDG GC
Sbjct: 829 VLVDGVPGC 837
>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)
Query: 1 VMVDGSWGC 9
V+VDG GC
Sbjct: 829 VLVDGVPGC 837
>sp|RDRP_TMGMV|REPLICASE large subunit|Tobacco mild green mosaic virus
Query: 1 VMVDGSWGC 9
V+VDG GC
Sbjct: 827 VLVDGVPGC 835
>sp|RDRP_TBRFV|REPLICASE large subunit|Tomato brown rugose fruit virus
Query: 1 VMVDGSWGC 9
V+VDG GC
Sbjct: 829 VLVDGVPGC 837
>sp|1A_BMV|REPLICATION protein 1a|Brome mosaic virus (BMV)
Query: 2 MVDGSWGC 9
MVDG GC
Sbjct: 682 MVDGVAGC 689
>sp|HEPA_EHV2|DNA helicase/primase complex-associated protein|Equine herpesvirus 2
Query: 4 DGSWGCC 10
+ +W CC
Sbjct: 287 ESAWNCC 293
30|Sequence|146|155|SWGCCPMPQA
>sp|NEC1_GAHVM|NUCLEAR egress protein 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 3 GCCP 6
GCCP
Sbjct: 104 GCCP 107
>sp|NEC1_EHV1B|NUCLEAR egress protein 1|Equine herpesvirus 1 (strain Ab4p)
Query: 3 GCCP 6
GCCP
Sbjct: 129 GCCP 132
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GCCPMPQ 9
GC P+P+
Sbjct: 1390 GCLPLPR 1396
>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain
Query: 1 SWGCCP 6
S GCCP
Sbjct: 467 SKGCCP 472
>sp|Y017_HVAVE|UNCHARACTERIZED protein ORF17|Heliothis virescens ascovirus 3e (HvAV-3e)
Query: 2 WGCCPMP 8
W C P P
Sbjct: 181 WACSPNP 187
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 SWGCCPMP 8
W CP+P
Sbjct: 172 EWNLCPLP 179
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 WGCCPM 7
WG CP+
Sbjct: 2492 WGFCPL 2497
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 SWGCCPMP 8
W CP+P
Sbjct: 171 EWNMCPLP 178
>sp|DPOL_ADECT|DNA polymerase|Canine adenovirus serotype 2 (strain
Query: 1 SWGCCP 6
S GCCP
Sbjct: 468 SKGCCP 473
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SWGCCPMP 8
S+ CCP P
Sbjct: 61 SYLCCPEP 68
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SWGCCPMP 8
S+ CCP P
Sbjct: 61 SYLCCPEP 68
>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)
Query: 4 CCPMPQA 10
C P+PQA
Sbjct: 1452 CAPIPQA 1458
>sp|SERDT_BPSAV|SERINYLTRANSFERASE phage ViI
Query: 2 WGCC 5
WGCC
Sbjct: 83 WGCC 86
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 SWGCCP 6
SWGC P
Sbjct: 761 SWGCNP 766
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 SWGCCP 6
SWGC P
Sbjct: 762 SWGCNP 767
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 SWGCCP 6
SWGC P
Sbjct: 762 SWGCNP 767
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 SWGCCP 6
SWGC P
Sbjct: 766 SWGCNP 771
>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3
Query: 3 GCCP 6
GCCP
Sbjct: 481 GCCP 484
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 GCCPMPQA 10
GCCP A
Sbjct: 119 GCCPACSA 126
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 SWGCCP 6
SWGC P
Sbjct: 766 SWGCNP 771
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 GCCP 6
GCCP
Sbjct: 385 GCCP 388
31|Sequence|151|160|PMPQASCCED
>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote
Query: 1 PMPQASCC 8
P PQ +CC
Sbjct: 2633 PSPQHTCC 2640
>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus
Query: 3 PQASCCE 9
PQ CCE
Sbjct: 98 PQPLCCE 104
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 PMPQASCC 8
P PQ CC
Sbjct: 853 PSPQVKCC 860
>sp|POLS_AURAV|STRUCTURAL polyprotein|Aura virus (AURAV)
Query: 1 PMPQASCC 8
P PQ CC
Sbjct: 862 PSPQIKCC 869
32|Sequence|156|165|SCCEDRVHCC
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 SCCEDRVHC 9
S C ++VHC
Sbjct: 518 SSCPNKVHC 526
>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)
Query: 1 SCCEDRVHCC 10
SC ED H C
Sbjct: 1026 SCLEDISHSC 1035
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 SCCEDRVHCC 10
S C +R+ CC
Sbjct: 450 SGCSERLACC 459
>sp|YL264_MIMIV|UNCHARACTERIZED WD repeat-containing protein L264|Acanthamoeba polyphaga mimivirus
Query: 1 SCCEDRVHCC 10
SCC ++ CC
Sbjct: 420 SCCANKNSCC 429
>sp|SPIKE_FIPV|SPIKE glycoprotein|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 3 CEDRVHC 9
CED HC
Sbjct: 252 CEDYEHC 258
>sp|ITP_SHV21|INNER tegument protein|Saimiriine herpesvirus 2 (strain 11)
Query: 2 CCEDRVHCC 10
C E+ VH C
Sbjct: 150 CVEEVVHVC 158
>sp|AC54_NPVAC|PROTEIN AC54|Autographa californica nuclear polyhedrosis virus
Query: 4 EDRVHCC 10
+DRV CC
Sbjct: 264 KDRVKCC 270
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka
Query: 2 CCEDRVHC 9
CC + +HC
Sbjct: 61 CCGELIHC 68
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 2 CCEDRVHC 9
CC + +HC
Sbjct: 61 CCGELIHC 68
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 3 CEDRVH 8
CED VH
Sbjct: 359 CEDHVH 364
>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 SCCEDRVHC 9
SC E +HC
Sbjct: 1583 SCAEIGLHC 1591
>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 SCCEDRVHC 9
SC E +HC
Sbjct: 1583 SCAEIGLHC 1591
>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 SCCEDRVHC 9
SC E +HC
Sbjct: 1583 SCAEIGLHC 1591
>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 SCCEDRVHC 9
SC E +HC
Sbjct: 1583 SCAEIGLHC 1591
>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain
Query: 1 SCCEDRVHC 9
SC E +HC
Sbjct: 1583 SCAEIGLHC 1591
33|Sequence|161|170|RVHCCPHGAF
>sp|TRM3_EHV1V|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain V592)
Query: 3 HCCPHGA 9
HC PHG+
Sbjct: 621 HCTPHGS 627
>sp|TRM3_EHV1B|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain Ab4p)
Query: 3 HCCPHGA 9
HC PHG+
Sbjct: 621 HCTPHGS 627
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 CCPHGAF 10
CCP G+F
Sbjct: 1640 CCPIGSF 1646
>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)
Query: 1 RVHCCPHG 8
R+ CCP G
Sbjct: 443 RLECCPGG 450
>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain
Query: 1 RVHCCP 6
RVHC P
Sbjct: 2800 RVHCMP 2805
>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain
Query: 1 RVHCCP 6
RVHC P
Sbjct: 2803 RVHCMP 2808
>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)
Query: 4 CCPHGAF 10
CC GAF
Sbjct: 458 CCSKGAF 464
>sp|CAPSD_WHV5|CAPSID protein|Woodchuck hepatitis B virus (isolate
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 45 REHCSPH 51
>sp|CAPSD_WHV4|CAPSID protein|Woodchuck hepatitis B virus (isolate
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 45 REHCSPH 51
>sp|CAPSD_WHV3|CAPSID protein|Woodchuck hepatitis B virus (isolate
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 45 REHCSPH 51
>sp|CAPSD_WHV1|CAPSID protein|Woodchuck hepatitis B virus (isolate
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 45 REHCSPH 51
>sp|CAPSD_WHV2|CAPSID protein|Woodchuck hepatitis B virus (isolate
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 45 REHCSPH 51
>sp|CAPSD_GSHV|CAPSID protein|Ground squirrel hepatitis virus (strain
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 45 REHCSPH 51
>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain
Query: 1 RVHCC 5
+VHCC
Sbjct: 133 KVHCC 137
>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)
Query: 1 RVHCCPHGAF 10
R HC P +F
Sbjct: 102 REHCTPSDSF 111
>sp|CAPSD_ASHV|CAPSID protein|Arctic squirrel hepatitis virus (ASHV)
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 45 REHCSPH 51
>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G
Query: 3 HCCPH 7
HC PH
Sbjct: 59 HCSPH 63
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 2 VHCCPHGA 9
VH PHGA
Sbjct: 35 VHSNPHGA 42
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|IORF_CVPIA|PROTEIN I|Porcine hemagglutinating encephalomyelitis virus (strain
Query: 2 VHCCPHGAF 10
V+CC G F
Sbjct: 97 VNCCHDGTF 105
>sp|IORF_CVP67|PROTEIN I|Porcine hemagglutinating encephalomyelitis virus (strain
Query: 2 VHCCPHGAF 10
V+CC G F
Sbjct: 97 VNCCHDGTF 105
>sp|ICP4_GAHVG|MAJOR viral transcription factor ICP4|Gallid herpesvirus 2 (strain GA)
Query: 5 CPHGAF 10
CP+GAF
Sbjct: 979 CPNGAF 984
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HCCPHGA 9
H CPH A
Sbjct: 279 HACPHYA 285
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 3 HCCPH 7
HC PH
Sbjct: 59 HCSPH 63
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 3 HCCPH 7
HC PH
Sbjct: 59 HCSPH 63
>sp|CAPSD_AMV|CAPSID protein|Alfalfa mosaic virus (AMV)
Query: 6 PHGAF 10
PHGAF
Sbjct: 132 PHGAF 136
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HCCPHGA 9
H CPH A
Sbjct: 279 HACPHYA 285
>sp|CAPSD_AMVST|CAPSID protein|Alfalfa mosaic virus (strain Strasbourg)
Query: 6 PHGAF 10
PHGAF
Sbjct: 132 PHGAF 136
>sp|ICP4_GAHVM|MAJOR viral transcription factor ICP4|Gallid herpesvirus 2 (strain
Query: 5 CPHGAF 10
CP+GAF
Sbjct: 1885 CPNGAF 1890
>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_WMHBV|CAPSID protein|Woolly monkey hepatitis B virus
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|PG140_VARV|VIRION membrane protein OPG140|Variola virus
Query: 3 HCCPH 7
HC PH
Sbjct: 70 HCAPH 74
>sp|PG140_VAR67|VIRION membrane protein OPG140|Variola virus (isolate
Query: 3 HCCPH 7
HC PH
Sbjct: 70 HCAPH 74
>sp|CAPSD_AMVYS|CAPSID protein|Alfalfa mosaic virus (strain YSMV)
Query: 6 PHGAF 10
PHGAF
Sbjct: 132 PHGAF 136
>sp|CAPSD_AMVLE|CAPSID protein|Alfalfa mosaic virus (strain 425
Query: 6 PHGAF 10
PHGAF
Sbjct: 132 PHGAF 136
>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|PG140_VACCW|VIRION membrane protein OPG140|Vaccinia virus (strain Western Reserve)
Query: 3 HCCPH 7
HC PH
Sbjct: 70 HCAPH 74
>sp|PG140_VACCC|VIRION membrane protein OPG140|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 HCCPH 7
HC PH
Sbjct: 70 HCAPH 74
>sp|PG140_MONPV|VIRION membrane protein OPG140|Monkeypox virus (MPXV)
Query: 3 HCCPH 7
HC PH
Sbjct: 70 HCAPH 74
>sp|HBEAG_GSHV|EXTERNAL core antigen|Ground squirrel hepatitis virus (strain
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 75 REHCSPH 81
>sp|HBEAG_WHV5|EXTERNAL core antigen|Woodchuck hepatitis B virus (isolate
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 75 REHCSPH 81
>sp|HBEAG_WHV4|EXTERNAL core antigen|Woodchuck hepatitis B virus (isolate
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 75 REHCSPH 81
>sp|HBEAG_WHV3|EXTERNAL core antigen|Woodchuck hepatitis B virus (isolate
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 75 REHCSPH 81
>sp|HBEAG_WHV2|EXTERNAL core antigen|Woodchuck hepatitis B virus (isolate
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 75 REHCSPH 81
>sp|HBEAG_WHV1|EXTERNAL core antigen|Woodchuck hepatitis B virus (isolate
Query: 1 RVHCCPH 7
R HC PH
Sbjct: 75 REHCSPH 81
>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CCPHG 8
CC HG
Sbjct: 5068 CCSHG 5072
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CCPHG 8
CC HG
Sbjct: 5098 CCSHG 5102
>sp|CAPSD_HBVD3|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CCPHG 8
CC HG
Sbjct: 5048 CCSHG 5052
>sp|CAPSD_HBVD6|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|IORF_CVTKE|PROTEIN I|Turkey enteric coronavirus (TCoV) (TCV)
Query: 2 VHCCPHGAF 10
V+CC G F
Sbjct: 97 VNCCHDGIF 105
>sp|IORF_CVHOC|PROTEIN I|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VHCCPHGAF 10
V+CC G F
Sbjct: 97 VNCCHDGIF 105
>sp|IORF_CVBQ|PROTEIN I|Bovine coronavirus (strain Quebec) (BCoV)
Query: 2 VHCCPHGAF 10
V+CC G F
Sbjct: 97 VNCCHDGIF 105
>sp|IORF_CVBOK|PROTEIN I|Bovine coronavirus (strain OK-0514) (BCoV)
Query: 2 VHCCPHGAF 10
V+CC G F
Sbjct: 97 VNCCHDGIF 105
>sp|IORF_CVBM|PROTEIN I|Bovine coronavirus (strain Mebus) (BCoV)
Query: 2 VHCCPHGAF 10
V+CC G F
Sbjct: 97 VNCCHDGIF 105
>sp|IORF_CVBLY|PROTEIN I|Bovine coronavirus (strain LY-138) (BCoV)
Query: 2 VHCCPHGAF 10
V+CC G F
Sbjct: 97 VNCCHDGIF 105
>sp|IORF_CVBLU|PROTEIN I|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 2 VHCCPHGAF 10
V+CC G F
Sbjct: 97 VNCCHDGIF 105
>sp|IORF_CVBLS|PROTEIN I|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)
Query: 2 VHCCPHGAF 10
V+CC G F
Sbjct: 97 VNCCHDGIF 105
>sp|IORF_CVBF|PROTEIN I|Bovine coronavirus (strain F15) (BCoV)
Query: 2 VHCCPHGAF 10
V+CC G F
Sbjct: 97 VNCCHDGIF 105
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCTPH 51
>sp|AV2_TYCSV|PROTEIN V2|Tomato yellow leaf curl Sardinia
Query: 4 CCPH 7
CCPH
Sbjct: 85 CCPH 88
>sp|AV2_TYCS2|PROTEIN V2|Tomato yellow leaf curl Sardinia
Query: 4 CCPH 7
CCPH
Sbjct: 85 CCPH 88
>sp|AV2_TYCS1|PROTEIN V2|Tomato yellow leaf curl Sardinia
Query: 4 CCPH 7
CCPH
Sbjct: 85 CCPH 88
34|Sequence|166|175|PHGAFCDLVH
>sp|VP3_GFLV|PROTEIN P3|Grapevine fanleaf virus (GFLV)
Query: 1 PHGAFCD 7
PHG FCD
Sbjct: 333 PHGCFCD 339
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 GAFCDLVH 10
G FCDLVH
Sbjct: 756 GDFCDLVH 763
>sp|Y15_VACCW|UNCHARACTERIZED protein 15|Vaccinia virus (strain Western Reserve)
Query: 1 PHGAFCDLV 9
PHG C +V
Sbjct: 51 PHGIMCSIV 59
>sp|CAPSD_MSVTA|CAPSID protein|Maize streak virus genotype B
Query: 1 PHGAFCDLVH 10
P G CDL++
Sbjct: 56 PSGGVCDLIN 65
>sp|CAPSD_MSVSE|CAPSID protein|Maize streak virus genotype C
Query: 1 PHGAFCDLVH 10
P G CDL++
Sbjct: 56 PSGGVCDLIN 65
>sp|CAPSD_MSVS|CAPSID protein|Maize streak virus genotype A
Query: 1 PHGAFCDLVH 10
P G CDL++
Sbjct: 56 PSGGVCDLIN 65
>sp|CAPSD_MSVRA|CAPSID protein|Maize streak virus genotype D
Query: 1 PHGAFCDLVH 10
P G CDL++
Sbjct: 56 PSGGVCDLIN 65
>sp|CAPSD_MSVN|CAPSID protein|Maize streak virus genotype A
Query: 1 PHGAFCDLVH 10
P G CDL++
Sbjct: 56 PSGGVCDLIN 65
>sp|CAPSD_MSVK|CAPSID protein|Maize streak virus genotype A
Query: 1 PHGAFCDLVH 10
P G CDL++
Sbjct: 56 PSGGVCDLIN 65
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 1 PHGAFCDLV 9
PHG C +V
Sbjct: 308 PHGIMCSIV 316
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 1 PHGAFCDLV 9
PHG C +V
Sbjct: 308 PHGIMCSIV 316
>sp|VP10_MPRVN|UNCHARACTERIZED protein VP10|Micromonas pusilla reovirus (isolate Netherlands/2005)
Query: 2 HGAFCDLVH 10
HG FC +H
Sbjct: 155 HGVFCRDIH 163
>sp|ORF23_TTVV4|PROBABLE protein VP2|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 HGAFC 6
HGAFC
Sbjct: 25 HGAFC 29
>sp|ENV_BIV29|ENVELOPE glycoprotein|Bovine immunodeficiency virus (strain R29)
Query: 1 PHGAFC 6
PHG +C
Sbjct: 646 PHGRYC 651
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PHGAFCDLVH 10
PH F LVH
Sbjct: 2311 PHPEFLGLVH 2320
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 PHGAFCDLVH 10
PH F LVH
Sbjct: 2284 PHPEFLGLVH 2293
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 PHGAFCDLVH 10
PH F LVH
Sbjct: 2289 PHPEFLGLVH 2298
>sp|CAPSD_SSVN|CAPSID protein|Sugarcane streak virus (isolate South
Query: 1 PHGAFCDLV 9
P G CDL+
Sbjct: 60 PSGGVCDLL 68
>sp|ORF24_TTVV4|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 HGAFC 6
HGAFC
Sbjct: 25 HGAFC 29
>sp|YL002_MIMIV|UNCHARACTERIZED Bro-N domain-containing protein L2|Acanthamoeba polyphaga mimivirus
Query: 4 AFCDLVH 10
FC+L+H
Sbjct: 182 GFCNLIH 188
>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)
Query: 3 GAFCD 7
GAFCD
Sbjct: 462 GAFCD 466
>sp|CAPSD_MSVPA|CAPSID protein|Maize streak virus genotype E
Query: 1 PHGAFCDLV 9
P G CDL+
Sbjct: 56 PSGGGCDLI 64
>sp|SPIKE_CVMJH|SPIKE glycoprotein|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 HGAFCDLVH 10
+G+FCD V+
Sbjct: 704 YGSFCDNVN 712
>sp|SPIKE_CVM4|SPIKE glycoprotein|Murine coronavirus (strain 4) (MHV-4)
Query: 2 HGAFCDLVH 10
+G+FCD V+
Sbjct: 845 YGSFCDNVN 853
>sp|SPIKE_CVMJC|SPIKE glycoprotein|Murine coronavirus (strain JHMV /
Query: 2 HGAFCDLVH 10
+G+FCD V+
Sbjct: 845 YGSFCDNVN 853
>sp|GLYCO_PIRYV|GLYCOPROTEIN virus (PIRYV)
Query: 5 FCDLVH 10
FCD VH
Sbjct: 175 FCDTVH 180
>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 832 YGSFCD 837
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 834 YGSFCD 839
>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 844 YGSFCD 849
>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 844 YGSFCD 849
>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 844 YGSFCD 849
>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 844 YGSFCD 849
>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 844 YGSFCD 849
>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 844 YGSFCD 849
>sp|SPIKE_CVBF|SPIKE glycoprotein|Bovine coronavirus (strain F15) (BCoV)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 844 YGSFCD 849
>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 844 YGSFCD 849
>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 844 YGSFCD 849
>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 844 YGSFCD 849
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 GAFCDLV 9
G +CDL+
Sbjct: 435 GGYCDLI 441
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 GAFCDLV 9
G +CDL+
Sbjct: 435 GGYCDLI 441
35|Sequence|171|180|CDLVHTRCIT
>sp|RDRP_CMVQ|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Q)
Query: 1 CDLVHTRCIT 10
CDLV+T CI+
Sbjct: 749 CDLVNTFCIS 758
>sp|TRX1_ALHV1|TRIPLEX capsid protein 1|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 CDLVHTRC 8
C LV+TRC
Sbjct: 232 CTLVYTRC 239
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CDLVHTRCI 9
CD + TRC+
Sbjct: 6197 CDAIMTRCL 6205
>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 1 CDLVHTRCI 9
CD + TRC+
Sbjct: 6041 CDAIMTRCL 6049
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 1 CDLVHTRCI 9
CD + TRC+
Sbjct: 6172 CDAIMTRCL 6180
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 CDLVHTRCI 9
CD + TRC+
Sbjct: 6168 CDAIMTRCL 6176
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 CDLVHTRCI 9
CD + TRC+
Sbjct: 6180 CDAIMTRCL 6188
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CDLVHTRCI 9
CD + TRC+
Sbjct: 6174 CDAIMTRCL 6182
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 1 CDLVHTRCI 9
CD V T+C+
Sbjct: 6165 CDAVMTKCL 6173
>sp|RDRP_CRSVL|RNA-DIRECTED RNA polymerase|Carnation ringspot virus (isolate Lommel)
Query: 5 HTRCI 9
HTRCI
Sbjct: 180 HTRCI 184
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 1 CDLVHTRCI 9
CD V T+C+
Sbjct: 6041 CDAVMTKCL 6049
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 5 HTRCI 9
HTRCI
Sbjct: 1286 HTRCI 1290
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 LVHTRC 8
+VHTRC
Sbjct: 2024 IVHTRC 2029
>sp|RDRP_CMVB|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain B)
Query: 1 CDLVHTRCIT 10
C+L+++ CI+
Sbjct: 753 CELINSFCIS 762
>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 CDLVHTRCI 9
C + +TRC+
Sbjct: 249 CRVTNTRCV 257
>sp|RIR2_EHV2|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Equine herpesvirus 2 (strain 86/87)
Query: 1 CDLVHTRCI 9
C LV+T C+
Sbjct: 276 CPLVYTGCL 284
>sp|MVP_ZYMVR|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain
Query: 1 CDLVHTRCI 9
C + +TRC+
Sbjct: 249 CRVTNTRCV 257
>sp|Y059_OSHVF|UNCHARACTERIZED protein ORF59|Ostreid herpesvirus 1 (isolate France)
Query: 1 CDLVHTRCI 9
C ++H CI
Sbjct: 651 CGIIHRSCI 659
36|Sequence|176|185|TRCITPTGTH
>sp|VL1_CRPVK|MAJOR capsid protein L1|Cottontail rabbit papillomavirus (strain Kansas)
Query: 3 CITPTGT 9
CITP+G+
Sbjct: 296 CITPSGS 302
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 296 SECITPNGS 304
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I89A7|HEMAGGLUTININ A virus (strain A/Equine/Jillin/1/1989
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 300 SECITPNGS 308
>sp|HEMA_I89A8|HEMAGGLUTININ A virus (strain A/Equine/Suffolk/1989
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I86A3|HEMAGGLUTININ A virus (strain A/Equine/Tennessee/5/1986
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I87A3|HEMAGGLUTININ A virus (strain A/Equine/Kentucky/1/1987
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I76AJ|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I86A2|HEMAGGLUTININ A virus (strain A/Equine/Kentucky/2/1986
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 1 TRCITPTG 8
TRC TP G
Sbjct: 294 TRCQTPHG 301
>sp|VG50_BPML5|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate
Query: 2 RCITPTGT 9
R I PTGT
Sbjct: 495 RTIAPTGT 502
>sp|HEMA_I80AB|HEMAGGLUTININ A virus (strain A/Equine/Romania/1980
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I80A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/8/1980
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I77A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/5/1977
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I63A2|HEMAGGLUTININ A virus (strain A/Equine/Miami/1/1963
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I85A5|HEMAGGLUTININ A virus (strain A/Equine/Santiago/1/1985
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I81A2|HEMAGGLUTININ A virus (strain A/Equine/Kentucky/1/1981)
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I76AD|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I76A8|HEMAGGLUTININ A virus (strain A/Equine/Fontainebleau/1976
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I63A3|HEMAGGLUTININ A virus (strain A/Duck/Ukraine/1/1963
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I85A1|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/9/1985
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I80A7|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/33/1980
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I76A3|HEMAGGLUTININ A virus (strain A/Duck/Alberta/78/1976
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|PTASE_MBVLF|PUTATIVE serine protease|Mushroom bacilliform virus (isolate Australia/AUS
Query: 3 CITPTGT 9
CI P+GT
Sbjct: 56 CIVPSGT 62
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 TRCITPTGT 9
T+C TP G+
Sbjct: 293 TKCQTPQGS 301
>sp|HEMA_I85A2|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/10/1985
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I82A5|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/7/1982
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I63A4|HEMAGGLUTININ A virus (strain A/Equine/Uruguay/1/1963
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|POL2_TOTV|RNA2 polyprotein|Tomato torrado virus (isolate Solanum
Query: 3 CITPTG 8
C TPTG
Sbjct: 667 CFTPTG 672
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 TRCITPTG 8
TRC TP G
Sbjct: 294 TRCQTPHG 301
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I77A7|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I76AC|HEMAGGLUTININ A virus (strain A/Goose/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I74A2|HEMAGGLUTININ A virus (strain A/Duck/Memphis/928/1974
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I87A1|HEMAGGLUTININ A virus (strain A/Mallard/Ohio/556/1987
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPVG 299
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPVG 299
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 4 ITPTGT 9
ITPTGT
Sbjct: 175 ITPTGT 180
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 4 ITPTGT 9
ITPTGT
Sbjct: 175 ITPTGT 180
>sp|HEMA_I66A0|HEMAGGLUTININ A virus (strain A/Turkey/Ontario/7732/1966
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPVG 299
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 4 ITPTGT 9
ITPTGT
Sbjct: 175 ITPTGT 180
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 4 ITPTGT 9
ITPTGT
Sbjct: 175 ITPTGT 180
>sp|HEMA_I72A0|HEMAGGLUTININ A virus (strain A/Equine/Algiers/1972
Query: 3 CITPTGT 9
CITP G+
Sbjct: 296 CITPNGS 302
>sp|HEMA_I82A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/21/1982
Query: 1 TRCITPTGT 9
+ C+TP G+
Sbjct: 279 SECVTPNGS 287
>sp|L_SV41|RNA-DIRECTED RNA polymerase L|Simian virus 41 (SV41)
Query: 3 CITPTGTH 10
C PTG H
Sbjct: 1807 CKVPTGDH 1814
>sp|POLG_BSTVG|GENOME polyprotein|Brome streak virus (strain German)
Query: 2 RCITPTGT 9
RC+T GT
Sbjct: 786 RCVTNAGT 793
>sp|POLG_BSTV1|GENOME polyprotein|Brome streak virus (strain 11-Cal)
Query: 2 RCITPTGT 9
RC+T GT
Sbjct: 2953 RCVTNAGT 2960
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|3BHS_VACCW|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 TRCITPTGTH 10
T C+ PTG +
Sbjct: 174 TCCLRPTGIY 183
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 TRCITPTGTH 10
T C+ PTG +
Sbjct: 174 TCCLRPTGIY 183
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 TRCITPTGTH 10
T C+ PTG +
Sbjct: 174 TCCLRPTGIY 183
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 1 TRCITPTGTH 10
T C+ PTG +
Sbjct: 174 TCCLRPTGIY 183
>sp|VS48_TBRVL|SATELLITE RNA 48 kDa protein|Tomato black ring virus (strain
Query: 3 CITPTG 8
C+TPTG
Sbjct: 6 CVTPTG 11
>sp|DPO21_BPK64|DEPOLYMERASE, capsule KN5-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)
Query: 4 ITPTGT 9
ITPTGT
Sbjct: 670 ITPTGT 675
>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)
Query: 3 CITPTGTH 10
C TPT H
Sbjct: 3554 CFTPTACH 3561
37|Sequence|181|190|PTGTHPLAKK
>sp|SPIKE_BCHK9|SPIKE glycoprotein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 1 PTGTHPLAK 9
PTG +PL++
Sbjct: 331 PTGVYPLSR 339
>sp|EXO2_BPT5|PROBABLE exonuclease subunit 2|Escherichia phage T5 (Enterobacteria phage
Query: 4 THPLAKK 10
THPLA K
Sbjct: 592 THPLAHK 598
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TGTHPLAK 9
T THPLA+
Sbjct: 211 TETHPLAQ 218
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TGTHPLAK 9
T THPLA+
Sbjct: 211 TETHPLAQ 218
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1738 SGTHPL 1743
>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_EBLV1|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 1 (strain
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)
Query: 1 PTGTHPLA 8
PTG H LA
Sbjct: 499 PTGMHSLA 506
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1738 SGTHPL 1743
>sp|GH_GAHVR|ENVELOPE glycoprotein H|Gallid herpesvirus 2 (strain RB-1b)
Query: 1 PTGTHP 6
PTGT+P
Sbjct: 149 PTGTNP 154
>sp|GH_GAHVM|ENVELOPE glycoprotein H|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 PTGTHP 6
PTGT+P
Sbjct: 149 PTGTNP 154
38|Sequence|186|195|PLAKKLPAQR
>sp|361L_IIV6|PROBABLE cysteine proteinase 361L|Invertebrate iridescent virus 6 (IIV-6)
Query: 1 PLAKKLPAQR 10
P+ KKLPA +
Sbjct: 468 PVLKKLPANK 477
>sp|SIGNS_REOVJ|PROTEIN sigma-NS|Reovirus type 2 (strain D5/Jones)
Query: 1 PLAKKLPAQR 10
P+A LPA+R
Sbjct: 189 PVAPTLPAER 198
39|Sequence|191|200|LPAQRTNRAV
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
40|Sequence|196|205|TNRAVALSSS
***** No hits found ******
41|Sequence|201|210|ALSSSVMCPD
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ALSSSVMCPD 10
A SSSV+C D
Sbjct: 408 AESSSVLCTD 417
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ALSSSVMCPD 10
A SSSV+C D
Sbjct: 408 AESSSVLCTD 417
42|Sequence|206|215|VMCPDARSRC
>sp|GP_SFTS|ENVELOPMENT polyprotein|Dabie bandavirus (Severe fever with
Query: 4 PDARSRC 10
PDARSRC
Sbjct: 638 PDARSRC 644
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 4 PDARSRC 10
PDARSRC
Sbjct: 638 PDARSRC 644
>sp|DNBI_TUHV2|MAJOR DNA-binding protein|Tupaiid herpesvirus (strain 2) (TuHV-2)
Query: 2 MCPDARSRC 10
+CP R RC
Sbjct: 473 LCPACRGRC 481
>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)
Query: 1 VMCPDARS 8
++C DARS
Sbjct: 112 ILCSDARS 119
>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate
Query: 4 PDARSRC 10
P+ARSRC
Sbjct: 339 PEARSRC 345
>sp|Y109_OSHVF|UNCHARACTERIZED protein ORF109|Ostreid herpesvirus 1 (isolate France)
Query: 2 MCPDARSRC 10
MCP A +C
Sbjct: 239 MCPSAGIKC 247
>sp|CAPSD_FMVD|PROBABLE capsid protein|Figwort mosaic virus (strain DxS)
Query: 3 CPDARSRC 10
CP R +C
Sbjct: 402 CPQGRKKC 409
>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 VMCPDARSR 9
++CPDA +R
Sbjct: 1325 MVCPDALNR 1333
>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 VMCPDARSR 9
++CPDA +R
Sbjct: 1319 MVCPDALNR 1327
>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 VMCPDARSR 9
++CPDA +R
Sbjct: 1319 MVCPDALNR 1327
>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 VMCPDARSR 9
++CPDA +R
Sbjct: 1324 MVCPDALNR 1332
>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O
Query: 1 VMCPDARSR 9
++CPDA +R
Sbjct: 1324 MVCPDALNR 1332
>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 VMCPDARSR 9
++CPDA +R
Sbjct: 1320 MVCPDALNR 1328
>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 VMCPDARSR 9
++CPDA +R
Sbjct: 1325 MVCPDALNR 1333
>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 VMCPDARSR 9
++CPDA +R
Sbjct: 1325 MVCPDALNR 1333
>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 VMCPDARSR 9
++CPDA +R
Sbjct: 1324 MVCPDALNR 1332
>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961
Query: 1 VMCPDARSR 9
++CPDA +R
Sbjct: 1324 MVCPDALNR 1332
>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2
Query: 1 VMCPDARSR 9
++CPDA +R
Sbjct: 1328 MVCPDALNR 1336
>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1
Query: 1 VMCPDARSR 9
++CPDA +R
Sbjct: 1321 MVCPDALNR 1329
>sp|VE7_HPV5B|PROTEIN E7|Human papillomavirus type 5b
Query: 1 VMCPDARSRC 10
++CPD R C
Sbjct: 89 LLCPDCRGNC 98
>sp|VE7_HPV05|PROTEIN E7|Human papillomavirus 5
Query: 1 VMCPDARSRC 10
++CPD R C
Sbjct: 89 LLCPDCRGNC 98
>sp|VF050_IIV3|UNCHARACTERIZED protein 094L|Invertebrate iridescent virus 3 (IIV-3)
Query: 3 CPDARSRC 10
CP+ RC
Sbjct: 360 CPEVEQRC 367
>sp|VE7_HPV20|PROTEIN E7|Human papillomavirus 20
Query: 1 VMCPDARSRC 10
++CPD R C
Sbjct: 88 LLCPDCRGNC 97
>sp|TGB1_PVSP|MOVEMENT and silencing protein TGBp1|Potato virus S (strain Peruvian)
Query: 1 VMCPDA 6
++CPDA
Sbjct: 217 ILCPDA 222
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VMCPDARSR 9
VMC +AR R
Sbjct: 240 VMCDEARRR 248
43|Sequence|211|220|ARSRCPDGST
>sp|CEP1_SHV21|CYTOPLASMIC envelopment protein 1|Saimiriine herpesvirus 2 (strain 11)
Query: 2 RSRCPDGS 9
+SRCPD +
Sbjct: 143 KSRCPDAT 150
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RSRCPDGST 10
RSRC +G T
Sbjct: 1720 RSRCVNGET 1728
>sp|RDRP_TNVD|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain D)
Query: 3 SRCPDG 8
+RCPDG
Sbjct: 476 ARCPDG 481
>sp|385L_IIV6|UNCHARACTERIZED protein 385L|Invertebrate iridescent virus 6 (IIV-6)
Query: 2 RSRCPDGST 10
RSR PDG +
Sbjct: 29 RSRHPDGDS 37
>sp|VG36_EHV2|PROBABLE inactive protein kinase 38|Equine herpesvirus 2 (strain 86/87)
Query: 2 RSRCPDGS 9
RSRCP+ S
Sbjct: 125 RSRCPEKS 132
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 3 SRCPDGS 9
S CPDG+
Sbjct: 1786 SGCPDGA 1792
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 3 SRCPDGS 9
S CPDG+
Sbjct: 1705 SGCPDGA 1711
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 3 SRCPDGS 9
S CPDG+
Sbjct: 1696 SGCPDGA 1702
>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RCPDG 8
RCPDG
Sbjct: 57 RCPDG 61
>sp|SPIKE_BC133|SPIKE glycoprotein|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 3 SRCPDGS 9
+RCP GS
Sbjct: 199 NRCPSGS 205
>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RCPDG 8
RCPDG
Sbjct: 57 RCPDG 61
>sp|RDRP_BOTVF|RNA replication protein|Botrytis virus F (isolate Botrytis
Query: 2 RSRCPDG 8
R RCPD
Sbjct: 650 RQRCPDN 656
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 ARSRCPD 7
A +RCPD
Sbjct: 440 AATRCPD 446
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 ARSRCPD 7
A +RCPD
Sbjct: 442 AATRCPD 448
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 ARSRCPDG 8
AR RCP G
Sbjct: 609 ARPRCPPG 616
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 4 RCPDGST 10
RC DG+T
Sbjct: 185 RCKDGNT 191
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 ARSRCPD 7
A +RCPD
Sbjct: 442 AATRCPD 448
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 428 ARCPKGET 435
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 428 ARCPKGET 435
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 427 ARCPKGET 434
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 428 ARCPKGET 435
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 427 ARCPKGET 434
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 427 ARCPKGET 434
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 ARSRCPDGST 10
A S+ PDG T
Sbjct: 429 AASQLPDGET 438
44|Sequence|216|225|PDGSTCCELP
>sp|AN_PSHV1|ALKALINE nuclease|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 PDGSTCCELP 10
P G T CELP
Sbjct: 370 PSGGTSCELP 379
>sp|PA_I79A7|POLYMERASE acidic protein|Influenza A virus (strain A/Grey
Query: 1 PDGSTCCE 8
PDG CC+
Sbjct: 271 PDGPPCCQ 278
>sp|YR096_MIMIV|PUTATIVE ankyrin repeat protein R96|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 PDGSTCC 7
PD TCC
Sbjct: 234 PDEKTCC 240
>sp|DPOL_HPBDW|PROTEIN P|Duck hepatitis B virus (isolate
Query: 1 PDGSTCCEL 9
PDG+T C++
Sbjct: 210 PDGTTTCKI 218
>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)
Query: 1 PDGSTCC 7
P+GS CC
Sbjct: 5 PEGSQCC 11
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 1 PDGSTCCELP 10
PDGS C P
Sbjct: 116 PDGSECLPPP 125
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 DGSTCCE 8
+ STCCE
Sbjct: 1108 NSSTCCE 1114
>sp|U2_BPP1|TAIL fiber assembly protein U'|Escherichia phage P1 (Bacteriophage P1)
Query: 1 PDGSTCCELP 10
P+G++ ELP
Sbjct: 71 PEGASVVELP 80
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PDGSTCCELP 10
PDGS C P
Sbjct: 116 PDGSECLPPP 125
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 PDGSTCCELP 10
PDGS C P
Sbjct: 116 PDGSECLPPP 125
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PDGSTCCELP 10
PDGS C P
Sbjct: 116 PDGSECLPPP 125
>sp|YL100_MIMIV|PUTATIVE ankyrin repeat protein L100|Acanthamoeba polyphaga mimivirus
Query: 1 PDGSTCC 7
P G+ CC
Sbjct: 82 PSGTKCC 88
>sp|NSP4_WTV|NON-STRUCTURAL protein 4|Wound tumor virus (WTV)
Query: 2 DGSTCCEL 9
DG +CC +
Sbjct: 314 DGCSCCRI 321
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 GSTCCELP 10
GS+CC P
Sbjct: 1376 GSSCCIRP 1383
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 GSTCCELP 10
GS+CC P
Sbjct: 1376 GSSCCIRP 1383
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 GSTCCELP 10
GS+CC P
Sbjct: 1376 GSSCCIRP 1383
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 PDGSTCCEL 9
PDGS C L
Sbjct: 839 PDGSACGRL 847
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2019 DGASCC 2024
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2016 DGASCC 2021
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2012 DGASCC 2017
>sp|REP78_AAV2S|PROTEIN Rep78|Adeno-associated virus 2 (isolate Srivastava/1982)
Query: 1 PDGSTCCEL 9
PD T C+L
Sbjct: 601 PDACTACDL 609
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2039 DGASCC 2044
>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2042 DGASCC 2047
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2044 DGASCC 2049
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2038 DGASCC 2043
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2030 DGASCC 2035
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2038 DGASCC 2043
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|REP52_AAV2S|PROTEIN Rep52|Adeno-associated virus 2 (isolate Srivastava/1982)
Query: 1 PDGSTCCEL 9
PD T C+L
Sbjct: 377 PDACTACDL 385
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 4 STCCEL 9
STCC L
Sbjct: 5018 STCCNL 5023
45|Sequence|221|230|CCELPSGKYG
>sp|3BHS_VACCW|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 CCELPSGKYG 10
CC P+G YG
Sbjct: 175 CCLRPTGIYG 184
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 CCELPSGKYG 10
CC P+G YG
Sbjct: 175 CCLRPTGIYG 184
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 CCELPSGKYG 10
CC P+G YG
Sbjct: 175 CCLRPTGIYG 184
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 1 CCELPSGKYG 10
CC P+G YG
Sbjct: 175 CCLRPTGIYG 184
>sp|L_MOBVC|RNA-DIRECTED RNA polymerase L|Mobala mammarenavirus (isolate Rat/Central African
Query: 2 CELPSGK 8
CELP+GK
Sbjct: 304 CELPNGK 310
>sp|3BHS_VAR67|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Variola
Query: 1 CCELPSGKYG 10
CC P+G YG
Sbjct: 57 CCLRPTGIYG 66
>sp|YL207_MIMIV|PUTATIVE helicase L207/L206|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 CELPSGKY 9
C+ P GKY
Sbjct: 83 CDAPYGKY 90
>sp|VG11_EHV2|UNCHARACTERIZED gene 11 protein|Equine herpesvirus 2 (strain 86/87)
Query: 1 CCELPSGKYG 10
CCE P G +
Sbjct: 386 CCEWPKGGHA 395
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 CCELPS 6
CC LPS
Sbjct: 499 CCALPS 504
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 CCELPSGKYG 10
CC L K+G
Sbjct: 1173 CCSLDHSKWG 1182
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 CCELPSGK 8
C +LPSG+
Sbjct: 1234 CIKLPSGQ 1241
>sp|VF424_ASFWA|PROBABLE methyltransferase EP424R|African swine fever virus (isolate
Query: 2 CELPSG 7
CELP G
Sbjct: 131 CELPGG 136
>sp|VF424_ASFP4|PROBABLE methyltransferase EP424R|African swine fever virus (isolate
Query: 2 CELPSG 7
CELP G
Sbjct: 131 CELPGG 136
>sp|VF424_ASFM2|PROBABLE methyltransferase EP424R|African swine fever virus (isolate
Query: 2 CELPSG 7
CELP G
Sbjct: 131 CELPGG 136
>sp|VF424_ASFK5|PROBABLE methyltransferase EP424R|African swine fever virus (isolate
Query: 2 CELPSG 7
CELP G
Sbjct: 131 CELPGG 136
>sp|VF424_ASFB7|PROBABLE methyltransferase EP424R|African swine fever virus (strain
Query: 2 CELPSG 7
CELP G
Sbjct: 132 CELPGG 137
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 1 CCELPS 6
CC LPS
Sbjct: 515 CCALPS 520
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 1 CCELPS 6
CC LPS
Sbjct: 515 CCALPS 520
>sp|RDRP_BOTVF|RNA replication protein|Botrytis virus F (isolate Botrytis
Query: 1 CCELPS 6
CC +PS
Sbjct: 1176 CCRIPS 1181
>sp|VP5_AQRVC|MICROTUBULE-ASSOCIATED protein VP5|Aquareovirus C (isolate Golden shiner/USA/GSRV/1977)
Query: 1 CCELPSGKY 9
C LP G Y
Sbjct: 405 CLTLPKGSY 413
>sp|YL273_MIMIV|PUTATIVE ankyrin repeat protein L273|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 CELPSGKY 9
CEL GK+
Sbjct: 213 CELSKGKF 220
>sp|GB_SUHVF|ENVELOPE glycoprotein B|Suid herpesvirus 1 (strain Indiana-Funkhauser
Query: 3 ELPSGKYG 10
E P G+YG
Sbjct: 98 EAPDGEYG 105
46|Sequence|226|235|SGKYGCCPMP
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 KYGCCPM 9
KYG CPM
Sbjct: 416 KYGFCPM 422
>sp|PG064_VACCW|PROTEIN OPG064|Vaccinia virus (strain Western Reserve)
Query: 3 KYGCCPM 9
KYG CPM
Sbjct: 416 KYGFCPM 422
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KYGCCPM 9
KYG CPM
Sbjct: 416 KYGFCPM 422
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 3 KYGCCPM 9
KYG CPM
Sbjct: 416 KYGFCPM 422
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SGKYGCCP 8
S +YGCCP
Sbjct: 102 SRRYGCCP 109
>sp|NS2_BRSVA|NON-STRUCTURAL protein 2|Bovine respiratory syncytial virus (strain
Query: 3 KYGCCPMP 10
KYG PMP
Sbjct: 87 KYGTLPMP 94
>sp|NS2_HRSVB|NON-STRUCTURAL protein 2|Human respiratory syncytial virus B
Query: 3 KYGCCPMP 10
KYG PMP
Sbjct: 87 KYGTFPMP 94
>sp|NS2_HRSVA|NON-STRUCTURAL protein 2|Human respiratory syncytial virus A
Query: 3 KYGCCPMP 10
KYG PMP
Sbjct: 87 KYGTFPMP 94
>sp|NS2_HRSV1|NON-STRUCTURAL protein 2|Human respiratory syncytial virus B
Query: 3 KYGCCPMP 10
KYG PMP
Sbjct: 87 KYGTFPMP 94
>sp|NS2_HRSV|NON-STRUCTURAL protein 2|Human respiratory syncytial virus
Query: 3 KYGCCPMP 10
KYG PMP
Sbjct: 87 KYGTFPMP 94
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 1 SGKYGCCP 8
S YGCCP
Sbjct: 102 SRGYGCCP 109
>sp|NS2_ORSVW|NON-STRUCTURAL protein 2|Ovine respiratory syncytial virus (strain
Query: 1 SGKYGCCPMP 10
+ KYG PMP
Sbjct: 85 NSKYGTFPMP 94
>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 3 KYGCC 7
KYGCC
Sbjct: 4570 KYGCC 4574
>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 3 KYGCC 7
KYGCC
Sbjct: 4577 KYGCC 4581
>sp|1A_OLV2I|REPLICATION protein 1a|Olive latent virus 2 (isolate
Query: 1 SGKYGCCPM 9
+G + CCP+
Sbjct: 113 TGVHSCCPL 121
>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate
Query: 1 SGKYGCCPM 9
S + CCPM
Sbjct: 243 SNVHSCCPM 251
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 3 KYGCC 7
KYGCC
Sbjct: 4617 KYGCC 4621
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 KYGCC 7
KYGCC
Sbjct: 4526 KYGCC 4530
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 YGCCPMP 10
Y CCP P
Sbjct: 62 YLCCPEP 68
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 YGCCPMP 10
Y CCP P
Sbjct: 62 YLCCPEP 68
>sp|CP_CSVMV|PUTATIVE Polyprotein CP|Cassava vein mosaic virus (CsVMV)
Query: 2 GKYGC 6
GKYGC
Sbjct: 688 GKYGC 692
>sp|CAPSD_SOCMV|CAPSID protein|Soybean chlorotic mottle virus
Query: 2 GKYGC 6
GKYGC
Sbjct: 321 GKYGC 325
>sp|PYHD_NPVHZ|POLYHEDRIN zea nuclear polyhedrosis virus
Query: 3 KYGCCPM 9
KYG CP+
Sbjct: 175 KYGGCPV 181
>sp|VF075_IIV3|UNCHARACTERIZED protein 088R|Invertebrate iridescent virus 3 (IIV-3)
Query: 3 KYGCC 7
K+GCC
Sbjct: 242 KFGCC 246
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 GKYGCCP 8
G YGC P
Sbjct: 801 GMYGCSP 807
>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus
Query: 2 GKYGCCPMP 10
G GC P+P
Sbjct: 154 GSGGCRPLP 162
>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus
Query: 1 SGKYGC 6
+G+YGC
Sbjct: 550 TGRYGC 555
>sp|YR882_MIMIV|UNCHARACTERIZED protein R882|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 SGKYGCC 7
+GKY CC
Sbjct: 106 NGKYICC 112
>sp|NEC1_GAHVM|NUCLEAR egress protein 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 2 GKYGCCP 8
G GCCP
Sbjct: 101 GVGGCCP 107
>sp|NEC1_EHV1B|NUCLEAR egress protein 1|Equine herpesvirus 1 (strain Ab4p)
Query: 5 GCCP 8
GCCP
Sbjct: 129 GCCP 132
>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain
Query: 5 GCCP 8
GCCP
Sbjct: 469 GCCP 472
>sp|Y006_OSHVF|UNCHARACTERIZED protein ORF6|Ostreid herpesvirus 1 (isolate France)
Query: 4 YGCC 7
YGCC
Sbjct: 271 YGCC 274
>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3
Query: 5 GCCP 8
GCCP
Sbjct: 481 GCCP 484
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 5 GCCP 8
GCCP
Sbjct: 385 GCCP 388
>sp|B_BPCHP|INTERNAL scaffolding protein VP3|Chlamydia phage 1 (Bacteriophage Chp1)
Query: 3 KYGCCPMP 10
+YG CP P
Sbjct: 60 EYGECPSP 67
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 5 GCCP 8
GCCP
Sbjct: 446 GCCP 449
>sp|DPOL_ADECT|DNA polymerase|Canine adenovirus serotype 2 (strain
Query: 5 GCCP 8
GCCP
Sbjct: 470 GCCP 473
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 5 GCCP 8
GCCP
Sbjct: 512 GCCP 515
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SGKYGCCP 8
+G YGC P
Sbjct: 376 TGGYGCPP 383
47|Sequence|231|240|CCPMPNATCC
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1379 CCPVNFKKCC 1388
>sp|POL2_RRVS|RNA2 polyprotein|Raspberry ringspot virus (strain S)
Query: 1 CCPMPNATCC 10
C MP AT C
Sbjct: 397 CSDMPTATMC 406
>sp|POL2_RRVC|RNA2 polyprotein|Raspberry ringspot virus (strain cherry)
Query: 1 CCPMPNATCC 10
C MP AT C
Sbjct: 396 CSDMPTATMC 405
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1389 CCPVNFKKCC 1398
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1375 CCPVNFKKCC 1384
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1371 CCPVNFKKCC 1380
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1382 CCPVNFKRCC 1391
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1383 CCPVNFKRCC 1392
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1370 CCPVNFKKCC 1379
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1371 CCPVNFKRCC 1380
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 CCPMPNATCC 10
C PN+ CC
Sbjct: 328 CVVTPNSVCC 337
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1381 CCPVNFKRCC 1390
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1391 CCPVNFKRCC 1400
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1373 CCPVNFKRCC 1382
>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote
Query: 3 PMPNATCC 10
P P TCC
Sbjct: 2633 PSPQHTCC 2640
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 2 CPMPNAT 8
CPMP++T
Sbjct: 380 CPMPSST 386
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 CPMPNATCC 10
CPM CC
Sbjct: 226 CPMSLYLCC 234
>sp|NS3_BANNV|NON-STRUCTURAL protein 3|Banna virus (BAV)
Query: 3 PMPNAT 8
P+PNAT
Sbjct: 29 PLPNAT 34
>sp|CAPSD_BPAL3|CAPSID protein F|Escherichia phage alpha3 (Bacteriophage alpha-3)
Query: 3 PMPNATC 9
P+P+ TC
Sbjct: 94 PLPSVTC 100
>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)
Query: 1 CCPMPNAT 8
C P+P AT
Sbjct: 1452 CAPIPQAT 1459
>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)
Query: 1 CCPMPNATC 9
CCP TC
Sbjct: 1357 CCPANFKTC 1365
>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain
Query: 2 CPMPNATC 9
CP +ATC
Sbjct: 2228 CPHHSATC 2235
>sp|RING2_BPCA1|RING protein 2|Bacteroides phage crAss001 (Bacteroides phage
Query: 2 CPMPNATCC 10
CP N T C
Sbjct: 170 CPEENGTIC 178
>sp|CAPSD_AHEV|PRO-SECRETED protein ORF2|Avian hepatitis E virus (isolate
Query: 1 CCPMPNATCC 10
C P+ TCC
Sbjct: 571 CLPLGLRTCC 580
>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus
Query: 1 CCPMPNAT 8
C P+P AT
Sbjct: 269 CLPLPEAT 276
>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)
Query: 2 CPMPNATC 9
C P ATC
Sbjct: 666 CDAPGATC 673
>sp|NSP1_ROTME|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 1 CCPMPNATCC 10
CC + N T C
Sbjct: 45 CCQLTNLTYC 54
48|Sequence|236|245|NATCCSDHLH
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TCCSDHLH 10
T C+DH H
Sbjct: 1289 TSCTDHYH 1296
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TCCSDHLH 10
T C+DH H
Sbjct: 1289 TSCTDHYH 1296
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TCCSDHLH 10
T C+DH H
Sbjct: 1289 TSCTDHYH 1296
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TCCSDHLH 10
T C+DH H
Sbjct: 1289 TSCTDHYH 1296
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TCCSDHLH 10
T C+DH H
Sbjct: 1289 TSCTDHYH 1296
>sp|Y040_SIFVH|UNCHARACTERIZED protein 40|Sulfolobus islandicus filamentous virus (isolate
Query: 1 NATCCSDHLH 10
N T DHLH
Sbjct: 44 NVTVAKDHLH 53
>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)
Query: 4 CCSDHLH 10
CCS HL+
Sbjct: 1983 CCSHHLY 1989
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 CCSDHLH 10
CC DH H
Sbjct: 230 CCRDHEH 236
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 NATCCSD 7
N TCC+D
Sbjct: 190 NKTCCND 196
>sp|HN_NDVH4|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain B1-Hitchner/47)
Query: 5 CSDHLH 10
C DHLH
Sbjct: 196 CRDHLH 201
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 4 CCSDHLH 10
CC DH H
Sbjct: 230 CCRDHGH 236
>sp|YL066_MIMIV|PUTATIVE ankyrin repeat protein L66|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 TCCSDHLH 10
+ C DHLH
Sbjct: 340 SACHDHLH 347
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 NATCCSD 7
N TCC D
Sbjct: 191 NKTCCGD 197
>sp|53DR_MIMIV|PUTATIVE 5'(3')-deoxyribonucleotidase R824|Acanthamoeba polyphaga mimivirus
Query: 1 NATCCSDHLH 10
N TCC D ++
Sbjct: 109 NQTCCIDKIN 118
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 CSDHLH 10
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 CSDHLH 10
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 NATCCSD 7
N TCC D
Sbjct: 188 NKTCCRD 194
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 1 NATCCSDHLH 10
++TC SDH+
Sbjct: 23 DSTCLSDHIQ 32
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 2 ATCCSDHL 9
A+CCS+ L
Sbjct: 972 ASCCSNSL 979
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 NATCCSD 7
+ TCCSD
Sbjct: 215 DKTCCSD 221
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3215 NVPFCSHHFH 3224
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3216 NVPFCSHHFH 3225
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3215 NVPFCSHHFH 3224
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3215 NVPFCSHHFH 3224
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3216 NVPFCSHHFH 3225
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3215 NVPFCSHHFH 3224
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3215 NVPFCSHHFH 3224
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3215 NVPFCSHHFH 3224
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 CCSDHLH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CCSDHLH 10
CC ++LH
Sbjct: 72 CCQEYLH 78
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 4 CCSDHLH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 4 CCSDHLH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 CCSDHLH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 NATCCSD 7
+ TCCSD
Sbjct: 219 DKTCCSD 225
>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 4 CCSDHL 9
CC DH+
Sbjct: 5194 CCYDHV 5199
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 4 CCSDHLH 10
CC ++LH
Sbjct: 72 CCQEYLH 78
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 1 NATCCSD 7
++TCC+D
Sbjct: 210 DSTCCND 216
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 4 CCSDHLH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 4 CCSDHL 9
CC DH+
Sbjct: 4899 CCYDHV 4904
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 4 CCSDHLH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 4 CCSDHL 9
CC DH+
Sbjct: 4897 CCYDHV 4902
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 4 CCSDHL 9
CC DH+
Sbjct: 4897 CCYDHV 4902
49|Sequence|241|250|SDHLHCCPQD
>sp|VNS2_AHSV|NON-STRUCTURAL protein NS2|African horse sickness virus (AHSV)
Query: 3 HLHCCPQD 10
H HCC D
Sbjct: 346 HYHCCAND 353
>sp|YR747_MIMIV|PUTATIVE ankyrin repeat protein R747|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 HLHCCPQD 10
HLH C QD
Sbjct: 107 HLHLCAQD 114
>sp|RDRP_BPSP|RNA-DIRECTED RNA polymerase subunit beta|Enterobacteria phage SP (Bacteriophage
Query: 5 HCCPQD 10
H CPQD
Sbjct: 171 HACPQD 176
>sp|RDRP_TMGMV|REPLICASE large subunit|Tobacco mild green mosaic virus
Query: 2 DHLHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_TMOB|REPLICASE large subunit|Tobamovirus Ob
Query: 2 DHLHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_PMMVS|REPLICASE large subunit|Pepper mild mottle virus (strain
Query: 2 DHLHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_PMMVJ|REPLICASE large subunit|Pepper mild mottle virus (strain
Query: 2 DHLHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore
Query: 2 DHLHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_ORSVC|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Korean
Query: 2 DHLHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)
Query: 2 DHLHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_TVCV|REPLICASE large subunit|Turnip vein-clearing virus (TVCV)
Query: 2 DHLHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|NS1_ADVG|INITIATOR protein NS1|Aleutian mink disease parvovirus (strain
Query: 3 HLHCC 7
H+HCC
Sbjct: 125 HIHCC 129
>sp|I7_AMEPV|CORE protease I7 homolog|Amsacta moorei entomopoxvirus (AmEPV)
Query: 1 SDHLHCCPQD 10
+DH CC D
Sbjct: 256 NDHFTCCVID 265
>sp|VF098_IIV3|UNCHARACTERIZED protein 038R|Invertebrate iridescent virus 3 (IIV-3)
Query: 3 HLHCCPQ 9
HL+ CPQ
Sbjct: 265 HLYHCPQ 271
>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)
Query: 4 LHCCPQD 10
L CCP +
Sbjct: 1447 LECCPSE 1453
>sp|EX0N_IIV3|PUTATIVE exonuclease 059L|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 SDHLHCCPQD 10
+DH+H C ++
Sbjct: 532 NDHIHQCSKE 541
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DHLHCCP 8
D L CCP
Sbjct: 181 DMLMCCP 187
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DHLHCCP 8
D L CCP
Sbjct: 181 DMLMCCP 187
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DHLHCCP 8
D L CCP
Sbjct: 181 DMLMCCP 187
>sp|VG72_GAHVM|UNCHARACTERIZED gene 72 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 3 HLHCCP 8
H+HC P
Sbjct: 858 HMHCVP 863
>sp|NS4_BANNV|NON-STRUCTURAL protein 4|Banna virus (BAV)
Query: 3 HLHCCP 8
+L+CCP
Sbjct: 7 NLNCCP 12
>sp|REP_SLCV|REPLICATION-ASSOCIATED protein|Squash leaf curl virus (SLCV)
Query: 1 SDHLHCCPQ 9
S HLHC Q
Sbjct: 57 SPHLHCLIQ 65
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SDHLHCC 7
S H++CC
Sbjct: 4678 SKHVNCC 4684
>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 1 SDHLHCC 7
S H++CC
Sbjct: 4746 SKHVNCC 4752
>sp|UB222_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus
Query: 1 SDHLHCC 7
++ LHCC
Sbjct: 183 TNFLHCC 189
>sp|TIPK_BPN15|TAIL tip assembly protein K|Escherichia phage N15 (Bacteriophage N15)
Query: 1 SDHLHCCPQD 10
++H H P+D
Sbjct: 45 TEHFHLSPED 54
50|Sequence|246|255|CCPQDTVCDL
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 CPQDTVCDL 10
CP+ TVC +
Sbjct: 1176 CPEGTVCSV 1184
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 CPQDTVCDL 10
CP+ TVC +
Sbjct: 1177 CPEGTVCSV 1185
>sp|NS4_BANNV|NON-STRUCTURAL protein 4|Banna virus (BAV)
Query: 1 CCPQDTVC 8
CCP VC
Sbjct: 10 CCPGRFVC 17
>sp|Y223_AFV1Y|UNCHARACTERIZED protein ORF223|Acidianus filamentous virus 1 (isolate
Query: 2 CPQDTVC 8
CP TVC
Sbjct: 209 CPYKTVC 215
>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 CCPQDTVCD 9
CC + CD
Sbjct: 458 CCSKGAFCD 466
>sp|1A_BBMV|REPLICATION protein 1a|Broad bean mottle virus
Query: 2 CPQDTV 7
CPQD V
Sbjct: 821 CPQDVV 826
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 3 PQDTVCDL 10
P+DT C L
Sbjct: 306 PKDTFCSL 313
51|Sequence|251|260|TVCDLIQSKC
>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate
Query: 2 VCDLIQSKC 10
VCDL++S C
Sbjct: 918 VCDLVRSTC 926
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 TVCDLIQSKC 10
T C +Q++C
Sbjct: 830 TACKFVQTRC 839
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 TVCDLIQSKC 10
T C +Q++C
Sbjct: 830 TACKFVQTRC 839
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 TVCDLIQSKC 10
T C +Q++C
Sbjct: 830 TACKFVQTRC 839
>sp|YL442_MIMIV|UNCHARACTERIZED protein L442|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 TVCDLIQSKC 10
T CDL + KC
Sbjct: 1040 TTCDLERLKC 1049
>sp|HE65_NPVAC|PROTEIN Early 65 kDa|Autographa californica nuclear polyhedrosis virus
Query: 3 CDLIQSKC 10
CD I+S C
Sbjct: 481 CDYIKSNC 488
>sp|ORFB_ELHVK|PROTEIN ORF B|Elephantid herpesvirus 1 (isolate Asian
Query: 2 VCDLIQSKC 10
VCD+ + KC
Sbjct: 446 VCDIARGKC 454
>sp|VP2_AHSV4|OUTER capsid protein VP2|African horse sickness virus 4
Query: 1 TVCDLIQSK 9
T+CD+I +K
Sbjct: 21 TICDVIVTK 29
>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)
Query: 2 VCDLIQSKC 10
+CDL ++C
Sbjct: 347 ICDLTSNEC 355
>sp|MVP_PEMVC|P3N-PIPO polyprotein|Pepper mottle virus (isolate California)
Query: 2 VCDLIQSKC 10
+CDL ++C
Sbjct: 347 ICDLTSNEC 355
>sp|ITP_SHV21|INNER tegument protein|Saimiriine herpesvirus 2 (strain 11)
Query: 2 VCDLIQSKC 10
+C+ IQ KC
Sbjct: 307 LCNTIQIKC 315
>sp|YL333_MIMIV|UNCHARACTERIZED protein L333|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 VCDLIQSKC 10
+C +I++KC
Sbjct: 71 ICTIIKNKC 79
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 2 VCDLIQSKC 10
+CD + +KC
Sbjct: 6040 LCDAVMTKC 6048
52|Sequence|256|265|IQSKCLSKEN
>sp|Y049_OSHVF|UNCHARACTERIZED protein ORF49|Ostreid herpesvirus 1 (isolate France)
Query: 1 IQSKCLSKEN 10
I++KC+ K N
Sbjct: 279 IKTKCIEKRN 288
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 1 IQSKCLSK 8
+ SKCLSK
Sbjct: 344 VPSKCLSK 351
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 1 IQSKCLSK 8
+ SKCLSK
Sbjct: 344 VPSKCLSK 351
53|Sequence|261|270|LSKENATTDL
>sp|MCP_ELHVK|MAJOR capsid protein|Elephantid herpesvirus 1 (isolate Asian
Query: 1 LSKENATTDL 10
+SKENA T L
Sbjct: 313 MSKENAVTAL 322
>sp|VF602_ASFWA|PROTEIN B602L|African swine fever virus (isolate
Query: 1 LSKENATTD 9
LSKEN T+D
Sbjct: 493 LSKENLTSD 501
>sp|VF602_ASFM2|PROTEIN B602L|African swine fever virus (isolate
Query: 1 LSKENATTD 9
LSKEN T+D
Sbjct: 557 LSKENLTSD 565
>sp|VP2_EHDV1|OUTER capsid protein VP2|Epizootic hemorrhagic disease virus 1
Query: 1 LSKENAT 7
+SKENAT
Sbjct: 142 ISKENAT 148
54|Sequence|266|275|ATTDLLTKLP
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 TTDLLTKLP 10
TTD+L +LP
Sbjct: 1974 TTDILNQLP 1982
>sp|YR883_MIMIV|UNCHARACTERIZED protein R883|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 TDLLTKLP 10
TD+LTK P
Sbjct: 333 TDILTKAP 340
>sp|EXO1_BPT4|EXONUCLEASE subunit 1|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 ATTDLLTKLP 10
A+T+LL K P
Sbjct: 97 ASTELLAKYP 106
>sp|YO21_BPHC1|UNCHARACTERIZED 19.2 kDa protein in|Haemophilus phage HP1 (strain HP1c1)
Query: 2 TTDLLTKLP 10
T LLTKLP
Sbjct: 13 TAFLLTKLP 21
>sp|SIGM3_REOVD|OUTER capsid protein sigma-3|Reovirus type 3 (strain Dearing)
Query: 1 ATTDLLTKLP 10
ATT +L K+P
Sbjct: 260 ATTPILGKMP 269
>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0
Query: 4 DLLTKLP 10
+LLTKLP
Sbjct: 2690 ELLTKLP 2696
>sp|SIGM3_REOVJ|OUTER capsid protein sigma-3|Reovirus type 2 (strain D5/Jones)
Query: 1 ATTDLLTKLP 10
ATT +L K+P
Sbjct: 260 ATTPILGKMP 269
>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)
Query: 4 DLLTKLP 10
+LLTKLP
Sbjct: 2690 ELLTKLP 2696
>sp|SIGM3_REOVL|OUTER capsid protein sigma-3|Reovirus type 1 (strain Lang)
Query: 1 ATTDLLTKLP 10
ATT +L K+P
Sbjct: 260 ATTPILGKMP 269
>sp|YL572_MIMIV|PUTATIVE AAA family ATPase L572|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 ATTDLLTKLP 10
A +D+L+K+P
Sbjct: 158 ADSDILSKIP 167
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 TTDLLTKLP 10
TTD+L +LP
Sbjct: 1974 TTDILNQLP 1982
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 TTDLLTKLP 10
TTD+L +LP
Sbjct: 1974 TTDILNQLP 1982
55|Sequence|271|280|LTKLPAHTVG
>sp|HELI1_TNAVC|PUTATIVE ATP-dependent RNA helicase|Trichoplusia ni ascovirus 2c (TnAV-2c)
Query: 1 LTKLPAHTV 9
LTKLP H +
Sbjct: 756 LTKLPLHVI 764
>sp|LT_POVM3|LARGE T antigen|Murine polyomavirus (strain A3) (MPyV)
Query: 2 TKLPAHTVG 10
T PAHT G
Sbjct: 158 TDTPAHTAG 166
>sp|LT_POVM1|LARGE T antigen|Mus musculus polyomavirus 1 (MPyV)
Query: 2 TKLPAHTVG 10
T PAHT G
Sbjct: 158 TDTPAHTAG 166
>sp|LT_POVBG|LARGE T antigen|Murine polyomavirus (strain BG) (MPyV)
Query: 2 TKLPAHTVG 10
T PAHT G
Sbjct: 158 TDTPAHTAG 166
>sp|LT_POVMA|LARGE T antigen|Murine polyomavirus (strain A2) (MPyV)
Query: 2 TKLPAHTVG 10
T PAHT G
Sbjct: 158 TDTPAHTAG 166
>sp|DPOL_IIV3|DNA polymerase 120R|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 LTKLPAH 7
L KLPAH
Sbjct: 932 LDKLPAH 938
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 LTKLPAHTVG 10
+ K P+HT+G
Sbjct: 1770 IRKNPSHTMG 1779
>sp|GC_EHV4|ENVELOPE glycoprotein C|Equine herpesvirus 4 (strain 1942)
Query: 1 LTKLPAHTVG 10
L LPAHT G
Sbjct: 184 LFNLPAHTNG 193
56|Sequence|276|285|AHTVGDVKCD
>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)
Query: 2 HTVGDVKCD 10
H++GD+ CD
Sbjct: 491 HSLGDIICD 499
>sp|TFLII_BPT5|H-N-H endonuclease F-TflII|Escherichia phage T5 (Enterobacteria phage
Query: 1 AHTVGDVKC 9
HT+G KC
Sbjct: 109 GHTIGGNKC 117
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 2 HTVGDVKCD 10
HT GDV D
Sbjct: 3039 HTAGDVNRD 3047
>sp|SPIKE_CVPIA|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus
Query: 4 VGDVKCD 10
+GD+KC+
Sbjct: 16 IGDLKCN 22
57|Sequence|281|290|DVKCDMEVSC
>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2
Query: 4 CDMEVSC 10
CD+EV+C
Sbjct: 799 CDLEVAC 805
>sp|PG172_VACCW|PROTEIN A43|Vaccinia virus (strain Western Reserve)
Query: 1 DVKCDMEVSC 10
D++C + VSC
Sbjct: 108 DIQCSVNVSC 117
>sp|Y023_NPVOP|UNCHARACTERIZED 73.1 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 DVKCDMEVS 9
DV+CDM V+
Sbjct: 404 DVQCDMRVA 412
>sp|PG172_VARV|PROTEIN A43|Variola virus
Query: 1 DVKCDMEVSC 10
D++C + VSC
Sbjct: 109 DIQCSVNVSC 118
>sp|PG172_VAR67|PROTEIN A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DVKCDMEVSC 10
D++C + VSC
Sbjct: 109 DIQCSVNVSC 118
>sp|PG172_VACCC|PROTEIN A43|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DVKCDMEVSC 10
D++C + VSC
Sbjct: 108 DIQCSVNVSC 117
>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)
Query: 1 DVKCDMEVSC 10
D++C + VSC
Sbjct: 110 DIQCSVNVSC 119
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 4 CDMEVSC 10
CD+EV C
Sbjct: 272 CDIEVDC 278
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 4 CDMEVSC 10
CD+EV C
Sbjct: 272 CDIEVDC 278
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 VKCDMEVS 9
++CDME++
Sbjct: 681 IRCDMELT 688
>sp|Y054_OSHVF|UNCHARACTERIZED protein ORF54|Ostreid herpesvirus 1 (isolate France)
Query: 4 CDMEVSC 10
C ME+SC
Sbjct: 552 CRMEISC 558
>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 772 KCDLEVT 778
>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 770 KCDLEVT 776
>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 772 KCDLEVT 778
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 766 KCDLEVT 772
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 748 KCDLEVT 754
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 748 KCDLEVT 754
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 748 KCDLEVT 754
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 748 KCDLEVT 754
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 748 KCDLEVT 754
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 746 KCDLEVT 752
>sp|DPOL_GAHVM|DNA polymerase catalytic subunit|Gallid herpesvirus 2 (strain
Query: 4 CDMEVSC 10
CD+E++C
Sbjct: 329 CDIEINC 335
>sp|ANCHR_BPKNT|ANCHOR protein|Klebsiella phage NTUH-K2044-K1-1 (Bacteriophage
Query: 1 DVKCDME 7
D++CD+E
Sbjct: 16 DIQCDIE 22
>sp|ANCHR_BPK34|ANCHOR protein|Klebsiella phage KP34 (Bacteriophage KP34)
Query: 1 DVKCDME 7
D++CD+E
Sbjct: 16 DIQCDIE 22
>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 291 RCDTVVSC 298
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 276 RCDTVVSC 283
>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 291 RCDTVVSC 298
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 274 RCDTVVSC 281
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 276 RCDTVVSC 283
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 274 RCDTVVSC 281
>sp|VP03_EHV2|PROBABLE membrane antigen 3|Equine herpesvirus 2 (strain 86/87)
Query: 1 DVKCDMEVSC 10
D++C VSC
Sbjct: 1170 DIRCVPAVSC 1179
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 275 RCDTVVSC 282
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 275 RCDTVVSC 282
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 3 KCDMEVSC 10
K DMEV C
Sbjct: 444 KIDMEVIC 451
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 3 KCDMEVSC 10
K DME SC
Sbjct: 390 KVDMEPSC 397
58|Sequence|286|295|MEVSCPDGYT
>sp|VP3_ROTPC|PROTEIN VP3|Rotavirus C (strain RVC/Pig/United States/Cowden/1980)
Query: 1 MEVSCPDGY 9
M++ PDGY
Sbjct: 392 MDIEIPDGY 400
>sp|VP3_ROTBS|PROTEIN VP3|Rotavirus C (isolate RVC/Cow/Japan/Shintoku/1991/G2P[3]) (RV-C)
Query: 1 MEVSCPDGY 9
M++ PDGY
Sbjct: 392 MDIEIPDGY 400
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 MEVSCPDGY 9
ME+ CP+ Y
Sbjct: 449 MEIMCPNCY 457
>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United
Query: 2 EVSCPDGY 9
EV+C DG+
Sbjct: 1833 EVTCKDGF 1840
>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette
Query: 2 EVSCPDGY 9
EV+C DG+
Sbjct: 1833 EVTCKDGF 1840
>sp|GP_HAZVJ|ENVELOPMENT polyprotein|Hazara virus (isolate JC280)
Query: 2 EVSCPDGYT 10
E SCPDG +
Sbjct: 762 ECSCPDGQS 770
>sp|Y024_OSHVF|UNCHARACTERIZED protein ORF24|Ostreid herpesvirus 1 (isolate France)
Query: 1 MEVSCPD 7
+ VSCPD
Sbjct: 74 LSVSCPD 80
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MEVSCPDG 8
+ V CPDG
Sbjct: 1131 VSVHCPDG 1138
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MEVSCPDG 8
+ V CPDG
Sbjct: 1131 VSVHCPDG 1138
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MEVSCPDG 8
+ V CPDG
Sbjct: 1131 VSVHCPDG 1138
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MEVSCPDG 8
+ V CPDG
Sbjct: 1131 VSVHCPDG 1138
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MEVSCPDG 8
+ V CPDG
Sbjct: 1131 VSVHCPDG 1138
>sp|NS1A_ANV1|NON-STRUCTURAL polyprotein 1A|Avian nephritis virus 1 (ANV-1)
Query: 3 VSCPDGY 9
VS PDGY
Sbjct: 849 VSFPDGY 855
>sp|VP91_NPVBM|CAPSID-ASSOCIATED protein Vp91|Bombyx mori nuclear polyhedrosis virus
Query: 5 CPDGYT 10
CPD YT
Sbjct: 208 CPDNYT 213
>sp|NS1AB_ANV1|NON-STRUCTURAL polyprotein 1AB|Avian nephritis virus 1 (ANV-1)
Query: 3 VSCPDGY 9
VS PDGY
Sbjct: 849 VSFPDGY 855
>sp|AC83_NPVAC|CAPSID-ASSOCIATED protein AC83|Autographa californica nuclear polyhedrosis virus
Query: 5 CPDGYT 10
CPD YT
Sbjct: 208 CPDNYT 213
>sp|FPS_FUJSV|TYROSINE-PROTEIN kinase transforming protein Fps|Fujinami sarcoma virus (FSV)
Query: 2 EVSCPDGYT 10
E+ CP G+T
Sbjct: 55 ELWCPKGHT 63
>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 3 VSCPDGY 9
V+C DGY
Sbjct: 509 VACSDGY 515
>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O
Query: 3 VSCPDGY 9
V+C DGY
Sbjct: 509 VACSDGY 515
>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 3 VSCPDGY 9
V+C DGY
Sbjct: 509 VACADGY 515
>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 3 VSCPDGY 9
V+C DGY
Sbjct: 509 VACSDGY 515
>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 3 VSCPDGY 9
V+C DGY
Sbjct: 509 VACSDGY 515
>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 3 VSCPDGY 9
V+C DGY
Sbjct: 509 VACSDGY 515
>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 3 VSCPDGY 9
V+C DGY
Sbjct: 509 VACSDGY 515
>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 3 VSCPDGY 9
V+C DGY
Sbjct: 509 VACADGY 515
>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961
Query: 3 VSCPDGY 9
V+C DGY
Sbjct: 509 VACADGY 515
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 MEVSCPDGY 9
+E CP GY
Sbjct: 2736 VETKCPCGY 2744
>sp|GLYCO_ARV|GLYCOPROTEIN River virus (ARV)
Query: 1 MEVSCPDGY 9
M+V CP+ Y
Sbjct: 41 MDVMCPNRY 49
>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 MEVSCPDGY 9
+E CP GY
Sbjct: 2736 VETKCPCGY 2744
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 MEVSCPDGY 9
+E CP GY
Sbjct: 2745 VETKCPCGY 2753
>sp|ENLYS_BPPHA|ENDOLYSIN LytA|Staphylococcus phage phi11 (Bacteriophage phi-11)
Query: 3 VSCPDGY 9
+SCP GY
Sbjct: 419 LSCPVGY 425
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 MEVSCPDGY 9
+E CP GY
Sbjct: 2736 VETKCPCGY 2744
>sp|VP91_NPVCF|CAPSID-ASSOCIATED protein Vp91|Choristoneura fumiferana nuclear polyhedrosis virus
Query: 5 CPDGYT 10
CPD YT
Sbjct: 207 CPDNYT 212
>sp|VP91_NPVEP|CAPSID-ASSOCIATED protein Vp91|Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)
Query: 5 CPDGYT 10
CPD YT
Sbjct: 207 CPDNYT 212
>sp|ENLYS_BPSH5|ENDOLYSIN LysH5|Staphylococcus phage phiH5 (Bacteriophage phiH5)
Query: 3 VSCPDGY 9
+SCP GY
Sbjct: 419 LSCPVGY 425
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 1 MEVSCPDGY 9
+E CP GY
Sbjct: 2826 VETRCPCGY 2834
>sp|VP91_NPVOP|CAPSID-ASSOCIATED protein Vp91|Orgyia pseudotsugata multicapsid polyhedrosis virus
Query: 5 CPDGYT 10
CPD YT
Sbjct: 207 CPDNYT 212
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 4 SCPDGYT 10
+ PDGYT
Sbjct: 58 TLPDGYT 64
>sp|AC150_NPVAC|PROTEIN AC150|Autographa californica nuclear polyhedrosis virus
Query: 1 MEVSCPDGY 9
+E+ CP+G+
Sbjct: 69 LELICPEGF 77
>sp|ENDO2_BPT5|PUTATIVE endonuclease|Escherichia phage T5 (Enterobacteria phage
Query: 6 PDGYT 10
PDGYT
Sbjct: 222 PDGYT 226
>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2
Query: 3 VSCPDGY 9
V+C DGY
Sbjct: 508 VACADGY 514
>sp|YL783_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus
Query: 2 EVSCPDGYT 10
++ CP YT
Sbjct: 434 DIYCPSNYT 442
>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 3 VSCPDGY 9
V+C DGY
Sbjct: 509 VACSDGY 515
>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1
Query: 3 VSCPDGY 9
V+C DGY
Sbjct: 509 VACVDGY 515
59|Sequence|291|300|PDGYTCCRLQ
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 4 YTCCRLQ 10
YTCCRLQ
Sbjct: 333 YTCCRLQ 339
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 4 YTCCRLQ 10
YTCCRLQ
Sbjct: 336 YTCCRLQ 342
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 4 YTCCRLQ 10
YTCCRLQ
Sbjct: 336 YTCCRLQ 342
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 4 YTCCRLQ 10
YTCCRLQ
Sbjct: 336 YTCCRLQ 342
>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain
Query: 4 YTCCRLQ 10
YTCC+LQ
Sbjct: 333 YTCCKLQ 339
>sp|PA_I79A7|POLYMERASE acidic protein|Influenza A virus (strain A/Grey
Query: 1 PDGYTCCR 8
PDG CC+
Sbjct: 271 PDGPPCCQ 278
>sp|DPOL_HPBDW|PROTEIN P|Duck hepatitis B virus (isolate
Query: 1 PDGYTCCRL 9
PDG T C++
Sbjct: 210 PDGTTTCKI 218
>sp|POLG_WMV2U|GENOME polyprotein|Watermelon mosaic virus II (isolate
Query: 1 PDGYTCC 7
PDG+T C
Sbjct: 458 PDGWTYC 464
>sp|YR096_MIMIV|PUTATIVE ankyrin repeat protein R96|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 PDGYTCC 7
PD TCC
Sbjct: 234 PDEKTCC 240
>sp|YL245_MIMIV|UNCHARACTERIZED HNH endonuclease L245|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 GYTCCRL 9
GY CC L
Sbjct: 38 GYYCCSL 44
>sp|Y074_NPVAC|UNCHARACTERIZED 30.6 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 2 DGYTCCRL 9
D Y CC L
Sbjct: 252 DTYNCCNL 259
>sp|VG083_BPPF1|UNCHARACTERIZED protein ORF83|Pseudomonas phage Pf1 (Bacteriophage Pf1)
Query: 1 PDGYTCCR 8
P+G+ CR
Sbjct: 17 PEGFMACR 24
>sp|MVP_PVMA|P3N-PIPO polyprotein|Potato virus A (PVA)
Query: 3 GYTCCR 8
GY CC+
Sbjct: 943 GYNCCQ 948
>sp|RPOB_NPVOP|PROBABLE DNA-directed RNA polymerase subunit|Orgyia pseudotsugata
Query: 4 YTCCRL 9
YTCC L
Sbjct: 47 YTCCAL 52
>sp|RDRP_LDCPR|RNA-DIRECTED RNA polymerase VP2|Lymantria dispar cypovirus 1 (isolate
Query: 4 YTCCRL 9
YTCC++
Sbjct: 208 YTCCQV 213
>sp|HELI_ALHV1|DNA replication helicase|Alcelaphine herpesvirus 1 (strain C500)
Query: 2 DGYTCC 7
DG+ CC
Sbjct: 667 DGFICC 672
>sp|CAPSD_BPS13|CAPSID protein F|Enterobacteria phage S13 (Bacteriophage S13)
Query: 3 GYTCCRLQ 10
G+ CC L+
Sbjct: 160 GFRCCHLK 167
>sp|CAPSD_BPPHS|CAPSID protein F|Enterobacteria phage phiX174 (Isolate Sanger)
Query: 3 GYTCCRLQ 10
G+ CC L+
Sbjct: 160 GFRCCHLK 167
>sp|VP3_NCMV|PROTEIN 3|Northern cereal mosaic virus (NCMV)
Query: 3 GYTCCRLQ 10
G++CC L+
Sbjct: 98 GFSCCPLE 105
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 PDGYTCCRL 9
PDG C RL
Sbjct: 839 PDGSACGRL 847
>sp|GC_PSHV1|ENVELOPE glycoprotein C|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 PDGYTCCR 8
P GY CR
Sbjct: 337 PPGYLVCR 344
>sp|CAPSD_BPPHK|CAPSID protein F|Enterobacteria phage phiK (Bacteriophage phi-K)
Query: 3 GYTCCRLQ 10
G+ CC L+
Sbjct: 160 GFRCCHLK 167
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 PDGYTCCRL 9
PDG C RL
Sbjct: 832 PDGPACGRL 840
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGYTCCRL 9
+G+ CC++
Sbjct: 310 EGFLCCKV 317
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGYTCCRL 9
+G+ CC++
Sbjct: 310 EGFLCCKV 317
>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)
Query: 2 DGYTCCRL 9
+G+ CC++
Sbjct: 310 EGFLCCKV 317
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGYTCCRL 9
+G+ CC++
Sbjct: 310 EGFLCCKV 317
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGYTCCRL 9
+G+ CC++
Sbjct: 310 EGFLCCKV 317
60|Sequence|296|305|CCRLQSGAWG
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 CCRLQSGAWG 10
CC L WG
Sbjct: 1173 CCSLDHSKWG 1182
>sp|MCE_ASFWA|MRNA-CAPPING enzyme|African swine fever virus (isolate
Query: 3 RLQSGAWG 10
R++SG WG
Sbjct: 245 RIKSGKWG 252
>sp|MCE_ASFP4|MRNA-CAPPING enzyme|African swine fever virus (isolate
Query: 3 RLQSGAWG 10
R++SG WG
Sbjct: 245 RIKSGKWG 252
>sp|MCE_ASFM2|MRNA-CAPPING enzyme|African swine fever virus (isolate
Query: 3 RLQSGAWG 10
R++SG WG
Sbjct: 245 RIKSGKWG 252
>sp|MCE_ASFK5|MRNA-CAPPING enzyme|African swine fever virus (isolate
Query: 3 RLQSGAWG 10
R++SG WG
Sbjct: 245 RIKSGKWG 252
>sp|MCE_ASFB7|MRNA-CAPPING enzyme|African swine fever virus (strain
Query: 3 RLQSGAWG 10
R++SG WG
Sbjct: 245 RIKSGKWG 252
>sp|DPOL_BPSP2|DNA polymerase|Bacillus phage SP02 (Bacteriophage SP02)
Query: 3 RLQSGAWG 10
+L+SG WG
Sbjct: 554 KLESGKWG 561
>sp|CEP2_EHV1B|CYTOPLASMIC envelopment protein 2|Equine herpesvirus 1 (strain Ab4p)
Query: 1 CCRLQSGAW 9
CC L G W
Sbjct: 181 CCVLAPGVW 189
>sp|CEP2_EHV1V|CYTOPLASMIC envelopment protein 2|Equine herpesvirus 1 (strain V592)
Query: 1 CCRLQSGAW 9
CC L G W
Sbjct: 181 CCVLAPGVW 189
>sp|FIB37_BPS16|LONG tail fiber protein Gp37|Salmonella phage S16 (Salmonella phage
Query: 1 CCRLQSGAWG 10
C R S WG
Sbjct: 442 CTRRNSAGWG 451
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 CRLQSGAWG 10
C LQ WG
Sbjct: 312 CELQWDTWG 320
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 1 CCRLQSGAW 9
CC L GAW
Sbjct: 192 CCALGPGAW 200
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 CCRLQSGAW 9
CC L GAW
Sbjct: 190 CCALGPGAW 198
>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 CCRLQSGAWG 10
CC AWG
Sbjct: 485 CCASDMWAWG 494
>sp|ENLYS_BPML5|ENDOLYSIN A|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 4 LQSGAW 9
LQ+GAW
Sbjct: 46 LQTGAW 51
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 CRLQSGAW 9
C L GAW
Sbjct: 2491 CHLMRGAW 2498
>sp|NS12_CVBLU|NON-STRUCTURAL protein of 12.7 kDa|Bovine coronavirus (strain 98TXSF-110-LUN)
Query: 2 CRLQSGAW 9
CR+ S AW
Sbjct: 39 CRVPSHAW 46
61|Sequence|301|310|SGAWGCCPFT
>sp|HELI1_HVAVE|PUTATIVE ATP-dependent RNA helicase|Heliothis virescens ascovirus 3e
Query: 1 SGAWGCCP 8
SG+W CP
Sbjct: 817 SGSWVSCP 824
>sp|NEC1_GAHVM|NUCLEAR egress protein 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 2 GAWGCCP 8
G GCCP
Sbjct: 101 GVGGCCP 107
>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain
Query: 5 GCCPF 9
GCCP+
Sbjct: 469 GCCPY 473
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 5 GCCPF 9
GCCP+
Sbjct: 446 GCCPY 450
>sp|DPOL_ADECT|DNA polymerase|Canine adenovirus serotype 2 (strain
Query: 5 GCCPF 9
GCCP+
Sbjct: 470 GCCPY 474
>sp|NING_BPVT2|PROTEIN ninG|Enterobacteria phage VT2-Sa (Bacteriophage VT2-Sa)
Query: 1 SGAWGCCP 8
S W CCP
Sbjct: 21 SNQWWCCP 28
>sp|NING_BP933|PROTEIN ninG|Escherichia phage 933W (Bacteriophage 933W)
Query: 1 SGAWGCCP 8
S W CCP
Sbjct: 21 SNQWWCCP 28
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 5 GCCPF 9
GCCP+
Sbjct: 512 GCCPY 516
>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3
Query: 5 GCCPF 9
GCCP+
Sbjct: 481 GCCPY 485
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 5 GCCPF 9
GCCP+
Sbjct: 385 GCCPY 389
>sp|NEC1_EHV1B|NUCLEAR egress protein 1|Equine herpesvirus 1 (strain Ab4p)
Query: 2 GAWGCCP 8
G GCCP
Sbjct: 126 GIGGCCP 132
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 6 CCPFT 10
CCPF+
Sbjct: 696 CCPFS 700
>sp|YR106_MIMIV|UNCHARACTERIZED protein R106|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 SGAWGCCPF 9
SG GC PF
Sbjct: 308 SGIKGCLPF 316
>sp|YR008_MIMIV|UNCHARACTERIZED putative helicase R8|Acanthamoeba polyphaga mimivirus (APMV)
Query: 5 GCCPFT 10
GCC FT
Sbjct: 41 GCCNFT 46
>sp|POL_RTBVP|POLYPROTEIN P3|Rice tungro bacilliform virus (isolate
Query: 4 WGCCPF 9
W CPF
Sbjct: 1308 WNVCPF 1313
>sp|V227_FOWPN|PUTATIVE ankyrin repeat protein FPV227|Fowlpox virus (strain NVSL) (FPV)
Query: 4 WGCCPF 9
W C PF
Sbjct: 337 WSCLPF 342
>sp|YR734_MIMIV|PUTATIVE ankyrin repeat protein R734|Acanthamoeba polyphaga mimivirus (APMV)
Query: 6 CCPF 9
CCPF
Sbjct: 436 CCPF 439
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 6 CCPF 9
CCPF
Sbjct: 1361 CCPF 1364
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 6 CCPF 9
CCPF
Sbjct: 1368 CCPF 1371
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 6 CCPF 9
CCPF
Sbjct: 1368 CCPF 1371
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 6 CCPF 9
CCPF
Sbjct: 1364 CCPF 1367
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 GAWGCCP 8
G GCCP
Sbjct: 116 GIGGCCP 122
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 2 GAWGCCP 8
G GCCP
Sbjct: 117 GIGGCCP 123
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC-----CPFT 10
G WGC CP T
Sbjct: 588 GIWGCSGKLICPTT 601
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 6 CCPF 9
CCPF
Sbjct: 1376 CCPF 1379
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 GAWGC 6
G WGC
Sbjct: 78 GCWGC 82
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 2 GAWGC 6
G WGC
Sbjct: 77 GCWGC 81
>sp|SERDT_BPSAV|SERINYLTRANSFERASE phage ViI
Query: 4 WGCC 7
WGCC
Sbjct: 83 WGCC 86
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 GAWGCCPFT 10
G++GC P T
Sbjct: 1324 GSFGCKPLT 1332
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 GAWGC 6
G WGC
Sbjct: 1067 GIWGC 1071
>sp|POLG_MRFVC|GENOME polyprotein|Maize rayado fino virus (isolate
Query: 6 CCPF 9
CCPF
Sbjct: 1177 CCPF 1180
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 1 SGAWGCCP 8
S +GCCP
Sbjct: 102 SRGYGCCP 109
62|Sequence|306|315|CCPFTQAVCC
>sp|YR713_MIMIV|UNCHARACTERIZED protein R713|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 CPFTQAVCC 10
C F Q +CC
Sbjct: 321 CDFEQCICC 329
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1379 CCPVNFKKCC 1388
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1383 CCPVNFKRCC 1392
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1389 CCPVNFKKCC 1398
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1382 CCPVNFKRCC 1391
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1375 CCPVNFKKCC 1384
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1371 CCPVNFKKCC 1380
>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1370 CCPVNFKKCC 1379
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1384 CCPVNFKKCC 1393
>sp|UBC4_MIMIV|PROBABLE bifunctional E2/E3 enzyme R795|Acanthamoeba polyphaga mimivirus
Query: 2 CPFTQAVCC 10
CP Q+V C
Sbjct: 97 CPIAQSVSC 105
>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1381 CCPVNFKRCC 1390
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1371 CCPVNFKRCC 1380
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1381 CCPVNFKKCC 1390
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1391 CCPVNFKRCC 1400
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1373 CCPVNFKRCC 1382
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 CPFTQAVCC 10
CP + +CC
Sbjct: 226 CPMSLYLCC 234
>sp|VG13_BPML5|GENE 13 protein|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 3 PFTQAVC 9
PFT A+C
Sbjct: 118 PFTAALC 124
>sp|VG13_BPMD2|GENE 13 protein|Mycobacterium phage D29 (Mycobacteriophage D29)
Query: 3 PFTQAVC 9
PFT A+C
Sbjct: 120 PFTAALC 126
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CCPFTQAVC 9
C PF Q C
Sbjct: 603 CNPFAQPAC 611
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CCPFTQAVC 9
C PF Q C
Sbjct: 603 CNPFAQPAC 611
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CCPFTQAVC 9
C PF Q C
Sbjct: 603 CNPFAQPAC 611
>sp|RDRP_CFMVN|REPLICASE polyprotein P2AB|Cocksfoot mottle virus (isolate Dactylis
Query: 2 CPFTQAVC 9
C F +AVC
Sbjct: 449 CRFREAVC 456
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 CPFTQAVCC 10
C F + CC
Sbjct: 464 CEFCEGKCC 472
63|Sequence|311|320|QAVCCEDHIH
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 CCEDHIH 10
CC DH H
Sbjct: 230 CCRDHEH 236
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 4 CCEDHIH 10
CC DH H
Sbjct: 230 CCRDHGH 236
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 CCEDHIH 10
CC DH H
Sbjct: 230 CCRDHEH 236
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5330 CCYDHV 5335
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 5 CEDHIH 10
CEDH+H
Sbjct: 359 CEDHVH 364
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)
Query: 4 CCEDHIH 10
CC DH H
Sbjct: 230 CCRDHGH 236
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5328 CCYDHV 5333
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 5 CEDHIH 10
CEDH H
Sbjct: 362 CEDHAH 367
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 CEDHIH 10
CEDH H
Sbjct: 363 CEDHAH 368
>sp|NS5B_IBVK|HOST translation inhibitor 5b|Avian infectious bronchitis virus
Query: 1 QAVCCEDHIH 10
Q CE+HIH
Sbjct: 49 QGKTCEEHIH 58
>sp|NS5B_IBVB|HOST translation inhibitor 5b|Avian infectious bronchitis virus
Query: 1 QAVCCEDHIH 10
Q CE+HIH
Sbjct: 49 QGKTCEEHIH 58
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VCCEDHIH 10
VCC++++H
Sbjct: 71 VCCQEYLH 78
>sp|HN_NDVH4|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain B1-Hitchner/47)
Query: 5 CEDHIH 10
C DH+H
Sbjct: 196 CRDHLH 201
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 3 VCCEDHIH 10
VCC++++H
Sbjct: 71 VCCQEYLH 78
>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5194 CCYDHV 5199
>sp|YL066_MIMIV|PUTATIVE ankyrin repeat protein L66|Acanthamoeba polyphaga mimivirus (APMV)
Query: 5 CEDHIH 10
C DH+H
Sbjct: 342 CHDHLH 347
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5353 CCYDHV 5358
Query: 4 CCEDHIH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5383 CCYDHV 5388
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 3 VCCEDHIH 10
VCC HI+
Sbjct: 599 VCCVQHIN 606
>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5390 CCYDHV 5395
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 CCEDHIH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5430 CCYDHV 5435
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 3 VCCEDHIH 10
VCC HI+
Sbjct: 599 VCCVQHIN 606
>sp|YL611_MIMIV|UNCHARACTERIZED protein L611|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 QAVCCEDHI 9
Q + C+DHI
Sbjct: 574 QLIHCKDHI 582
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5339 CCYDHV 5344
>sp|KITH_FHV1|THYMIDINE kinase|Feline herpesvirus 1 (FeHV-1) (Feline
Query: 1 QAVCCEDH 8
Q V CE+H
Sbjct: 119 QKVVCEEH 126
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5324 CCYDHV 5329
Query: 4 CCEDHIH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5336 CCYDHV 5341
Query: 4 CCEDHIH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 4 CCEDHI 9
CC DH+
Sbjct: 4897 CCYDHV 4902
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 4 CCEDHI 9
CC DH+
Sbjct: 4897 CCYDHV 4902
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 4 CCEDHIH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 4 CCEDHI 9
CC DH+
Sbjct: 4899 CCYDHV 4904
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 4 CCEDHIH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CEDHIH 10
CE+H+H
Sbjct: 367 CEEHLH 372
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CEDHIH 10
CE+H+H
Sbjct: 367 CEEHLH 372
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5326 CCYDHV 5331
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5326 CCYDHV 5331
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5326 CCYDHV 5331
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5326 CCYDHV 5331
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QAVCCEDHI 9
Q +CCE+ +
Sbjct: 81 QLICCEESL 89
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5364 CCYDHV 5369
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5384 CCYDHV 5389
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5414 CCYDHV 5419
>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5326 CCYDHV 5331
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QAVCCEDHI 9
Q +CCE+ +
Sbjct: 81 QLICCEESL 89
>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain
Query: 5 CEDHI 9
CEDH+
Sbjct: 1547 CEDHV 1551
>sp|POL1_BRSV|RNA1 polyprotein|Beet ringspot virus (BRSV) (Tomato
Query: 5 CEDHI 9
CEDH+
Sbjct: 1545 CEDHV 1549
>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)
Query: 1 QAVCCEDHI 9
+A+CC D +
Sbjct: 840 EAICCVDDL 848
>sp|PRO_SRV1|GAG-PRO polyprotein|Simian retrovirus SRV-1
Query: 5 CEDHIH 10
C +HIH
Sbjct: 563 CHEHIH 568
>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1
Query: 5 CEDHIH 10
C +HIH
Sbjct: 563 CHEHIH 568
>sp|GAG_SRV1|GAG polyprotein|Simian retrovirus SRV-1
Query: 5 CEDHIH 10
C +HIH
Sbjct: 563 CHEHIH 568
64|Sequence|316|325|EDHIHCCPAG
>sp|NS1_ADVG|INITIATOR protein NS1|Aleutian mink disease parvovirus (strain
Query: 3 HIHCC 7
HIHCC
Sbjct: 125 HIHCC 129
>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)
Query: 2 DHIHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_TVCV|REPLICASE large subunit|Turnip vein-clearing virus (TVCV)
Query: 2 DHIHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_TMOB|REPLICASE large subunit|Tobamovirus Ob
Query: 2 DHIHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_TMGMV|REPLICASE large subunit|Tobacco mild green mosaic virus
Query: 2 DHIHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_PMMVS|REPLICASE large subunit|Pepper mild mottle virus (strain
Query: 2 DHIHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_PMMVJ|REPLICASE large subunit|Pepper mild mottle virus (strain
Query: 2 DHIHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore
Query: 2 DHIHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|RDRP_ORSVC|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Korean
Query: 2 DHIHCC 7
D++HCC
Sbjct: 121 DYVHCC 126
>sp|NS3B_CVCBG|NON-STRUCTURAL protein 3b|Canine coronavirus (strain BGF10) (CCoV)
Query: 1 EDHIHCCPAG 10
EDH++ P+G
Sbjct: 236 EDHVYDVPSG 245
>sp|VNS2_AHSV|NON-STRUCTURAL protein NS2|African horse sickness virus (AHSV)
Query: 3 HIHCC 7
H HCC
Sbjct: 346 HYHCC 350
>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)
Query: 4 IHCCPAG 10
+ CCP G
Sbjct: 444 LECCPGG 450
>sp|EX0N_IIV3|PUTATIVE exonuclease 059L|Invertebrate iridescent virus 3 (IIV-3)
Query: 2 DHIHCC 7
DHIH C
Sbjct: 533 DHIHQC 538
>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate
Query: 3 HIHCC 7
+IHCC
Sbjct: 2356 YIHCC 2360
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 HIHCCPA 9
H++CC A
Sbjct: 4680 HVNCCTA 4686
>sp|HELI_EHV2|DNA replication helicase|Equine herpesvirus 2 (strain 86/87)
Query: 2 DHIHCCPAG 10
D IH C AG
Sbjct: 694 DLIHICTAG 702
>sp|AN_PSHV1|ALKALINE nuclease|Psittacid herpesvirus 1 (isolate Amazon
Query: 2 DHIHCCP 8
DHIH P
Sbjct: 445 DHIHAIP 451
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 1 EDHIH 5
EDHIH
Sbjct: 31 EDHIH 35
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 EDHIH 5
EDHIH
Sbjct: 31 EDHIH 35
>sp|PG129_VACCW|MAJOR core protein OPG129|Vaccinia virus (strain Western Reserve)
Query: 1 EDHIH 5
EDHIH
Sbjct: 31 EDHIH 35
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EDHIH 5
EDHIH
Sbjct: 31 EDHIH 35
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 EDHIH 5
EDHIH
Sbjct: 31 EDHIH 35
>sp|VG72_GAHVM|UNCHARACTERIZED gene 72 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 3 HIHCCP 8
H+HC P
Sbjct: 858 HMHCVP 863
>sp|RDRP_SHMV|REPLICASE large subunit|Sunn-hemp mosaic virus (SHMV) (TMV
Query: 3 HIHCC-PA 9
++HCC PA
Sbjct: 119 YVHCCNPA 126
>sp|RDRP_PCV87|REPLICASE large subunit|Peanut clump virus (isolate 87/TGTA2)
Query: 1 EDHIHCC 7
+ ++HCC
Sbjct: 135 DQNVHCC 141
>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)
Query: 3 HIHCC 7
++HCC
Sbjct: 122 YVHCC 126
>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)
Query: 3 HIHCC 7
++HCC
Sbjct: 122 YVHCC 126
>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh
Query: 3 HIHCC 7
++HCC
Sbjct: 122 YVHCC 126
>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh
Query: 3 HIHCC 7
++HCC
Sbjct: 122 YVHCC 126
>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)
Query: 3 HIHCC 7
++HCC
Sbjct: 122 YVHCC 126
>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)
Query: 3 HIHCC 7
++HCC
Sbjct: 122 YVHCC 126
>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean
Query: 3 HIHCC 7
++HCC
Sbjct: 122 YVHCC 126
>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)
Query: 3 HIHCC 7
++HCC
Sbjct: 122 YVHCC 126
>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)
Query: 3 HIHCC 7
++HCC
Sbjct: 122 YVHCC 126
>sp|RDRP_TBRFV|REPLICASE large subunit|Tomato brown rugose fruit virus
Query: 3 HIHCC 7
++HCC
Sbjct: 122 YVHCC 126
>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus
Query: 3 HIHCC 7
++HCC
Sbjct: 122 YVHCC 126
>sp|DPOL_FRG3G|PUTATIVE DNA polymerase 060R|Frog virus 3 (isolate Goorha)
Query: 1 EDHIHC 6
EDH++C
Sbjct: 510 EDHLNC 515
>sp|MCP_GAHVM|MAJOR capsid protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 5 HCCPAG 10
HC PAG
Sbjct: 5 HCPPAG 10
65|Sequence|321|330|CCPAGFTCDT
>sp|NS4_BANNV|NON-STRUCTURAL protein 4|Banna virus (BAV)
Query: 1 CCPAGFTC 8
CCP F C
Sbjct: 10 CCPGRFVC 17
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CPAGFTCDT 10
CP GF+ DT
Sbjct: 2632 CPMGFSYDT 2640
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CPAGFTCDT 10
CP GF+ DT
Sbjct: 2632 CPMGFSYDT 2640
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CPAGFTCDT 10
CP GF+ DT
Sbjct: 2632 CPMGFSYDT 2640
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CPAGFTCDT 10
CP GF+ DT
Sbjct: 2632 CPMGFSYDT 2640
>sp|ENLYS_BPM10|PSEUDOMUREIN endoisopeptidase PeiW|Methanothermobacter phage psiM100
Query: 1 CCPAGF 6
CC AGF
Sbjct: 265 CCTAGF 270
>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 CCPAGFTCD 9
CC G CD
Sbjct: 458 CCSKGAFCD 466
>sp|YL732_MIMIV|UNCHARACTERIZED protein L732|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 CPAGFT 7
CP GFT
Sbjct: 64 CPVGFT 69
>sp|ENV_SIVTN|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate TAN1)
Query: 1 CCPAGF 6
C PAGF
Sbjct: 215 CAPAGF 220
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 230 CAPAGF 235
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 220 CAPAGF 225
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 219 CAPAGF 224
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 214 CAPAGF 219
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 215 CAPAGF 220
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 221 CAPAGF 226
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 214 CAPAGF 219
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 219 CAPAGF 224
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 212 CAPAGF 217
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 216 CAPAGF 221
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 213 CAPAGF 218
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 223 CAPAGF 228
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 216 CAPAGF 221
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 223 CAPAGF 228
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 219 CAPAGF 224
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 216 CAPAGF 221
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 230 CAPAGF 235
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 219 CAPAGF 224
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 223 CAPAGF 228
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 216 CAPAGF 221
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 226 CAPAGF 231
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 220 CAPAGF 225
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 211 CAPAGF 216
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 219 CAPAGF 224
>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain
Query: 3 PAGFTCD 9
PA F+CD
Sbjct: 2712 PAPFSCD 2718
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 3 PAGFTCD 9
PA F+CD
Sbjct: 2712 PAPFSCD 2718
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 3 PAGFTCD 9
PA F+CD
Sbjct: 2712 PAPFSCD 2718
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 3 PAGFTCD 9
PA F+CD
Sbjct: 2802 PAPFSCD 2808
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 3 PAGFTCD 9
PA F+CD
Sbjct: 2721 PAPFSCD 2727
>sp|DNBI_EHV1|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain HVS25A)
Query: 2 CP-AGFTCD 9
CP GFTC+
Sbjct: 203 CPRVGFTCE 211
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 220 CVPAGF 225
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 231 CTPAGF 236
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 223 CTPAGF 228
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 225 CTPAGF 230
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 221 CTPAGF 226
>sp|ENV_WDSV|ENVELOPE glycoprotein|Walleye dermal sarcoma virus (WDSV)
Query: 3 PAGFTCDT 10
P FTC T
Sbjct: 146 PGNFTCST 153
>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)
Query: 1 CCPAGFTC 8
C PA F C
Sbjct: 468 CSPAYFNC 475
>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)
Query: 1 CCPAGFTC 8
C PA F C
Sbjct: 468 CSPAYFNC 475
>sp|ENV_SIVMB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate MB66)
Query: 1 CCPAGF 6
C PAGF
Sbjct: 242 CAPAGF 247
>sp|ENV_SIVCZ|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate CPZ
Query: 1 CCPAGF 6
C PAGF
Sbjct: 216 CAPAGF 221
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CPAGFTCDT 10
CP GF DT
Sbjct: 2632 CPMGFAYDT 2640
>sp|DNBI_EHV1B|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain Ab4p)
Query: 2 CP-AGFTCD 9
CP GFTC+
Sbjct: 1037 CPRVGFTCE 1045
>sp|DNBI_EHV1V|MAJOR DNA-binding protein|Equine herpesvirus 1 (strain V592)
Query: 2 CP-AGFTCD 9
CP GFTC+
Sbjct: 1037 CPRVGFTCE 1045
>sp|GH_SUHVK|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Kaplan)
Query: 2 CPAGF 6
CPAGF
Sbjct: 315 CPAGF 319
>sp|GH_SUHVR|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Rice)
Query: 2 CPAGF 6
CPAGF
Sbjct: 315 CPAGF 319
>sp|GH_SUHVN|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain NIA-3)
Query: 2 CPAGF 6
CPAGF
Sbjct: 315 CPAGF 319
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 1 CCPAGFTCDT 10
C P GFT +
Sbjct: 127 CVPPGFTSSS 136
>sp|ENV_SIVVG|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 1 CCPAGF 6
C PAGF
Sbjct: 237 CAPAGF 242
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 CCPAGFTC 8
C PA TC
Sbjct: 93 CSPASSTC 100
>sp|Y121_OSHVF|PUTATIVE zinc finger protein ORF121|Ostreid herpesvirus 1 (isolate France)
Query: 2 CPAGFTCD 9
CP + CD
Sbjct: 83 CPTHYICD 90
66|Sequence|326|335|FTCDTQKGTC
>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus
Query: 3 CDTQKGTC 10
CDT+ G C
Sbjct: 2559 CDTRLGDC 2566
>sp|RIR1_MUHVS|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Murid herpesvirus 1 (strain
Query: 2 TCDTQKGTC 10
TC Q+G C
Sbjct: 133 TCANQRGCC 141
>sp|VNS2_EHDV2|NON-STRUCTURAL protein NS2|Epizootic hemorrhagic disease virus 2
Query: 1 FTCDTQK 7
+TC+TQK
Sbjct: 203 WTCETQK 209
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)
Query: 2 TCDTQKGTC 10
TCD K TC
Sbjct: 333 TCDFLKATC 341
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 2 TCDTQKGTC 10
TCD K TC
Sbjct: 333 TCDFLKATC 341
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 2 TCDTQKGTC 10
TCD K TC
Sbjct: 333 TCDFLKATC 341
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 FTCDTQKGT 9
FTC T GT
Sbjct: 1731 FTCVTASGT 1739
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 1 FTCDTQKGT 9
FTC T GT
Sbjct: 1821 FTCVTASGT 1829
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 FTCDTQKGT 9
FTC T GT
Sbjct: 1740 FTCVTASGT 1748
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 2 TCDTQKGTC 10
TCD K TC
Sbjct: 333 TCDFLKATC 341
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 TCDTQKGTC 10
TCD K TC
Sbjct: 333 TCDFLKATC 341
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 2 TCDTQKGTC 10
TCD K TC
Sbjct: 333 TCDFLKATC 341
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 2 TCDTQKGTC 10
TCD K TC
Sbjct: 333 TCDFLKATC 341
>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 FTCDTQKGT 9
FTC T GT
Sbjct: 1731 FTCVTASGT 1739
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 FTCDTQKGT 9
FTC T GT
Sbjct: 1731 FTCVTASGT 1739
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 TCDTQKGTC 10
TCD K TC
Sbjct: 333 TCDFLKATC 341
>sp|POLS_SAV2|STRUCTURAL polyprotein|Alphavirus salmon subtype 2 (SAV2)
Query: 1 FTCDTQKGTC 10
FT D+Q TC
Sbjct: 581 FTSDSQTFTC 590
>sp|POLS_SAV3|STRUCTURAL polyprotein|Alphavirus salmon subtype 3 (SAV3)
Query: 1 FTCDTQKGTC 10
FT D+Q TC
Sbjct: 579 FTSDSQTFTC 588
>sp|ENV_WDSV|ENVELOPE glycoprotein|Walleye dermal sarcoma virus (WDSV)
Query: 1 FTCDTQK 7
FTC T+K
Sbjct: 149 FTCSTRK 155
>sp|POLS_SAV1|STRUCTURAL polyprotein|Alphavirus salmon subtype 1 (SAV1)
Query: 1 FTCDTQKGTC 10
FT D+Q TC
Sbjct: 580 FTSDSQTFTC 589
67|Sequence|331|340|QKGTCEQGPH
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 QKGTCEQG 8
QKG C+ G
Sbjct: 144 QKGNCQSG 151
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 QKGTCEQG 8
QKG C+ G
Sbjct: 144 QKGNCQSG 151
>sp|FIBER_BPSFV|TAIL spike protein|Shigella phage Sf6 (Shigella flexneri
Query: 1 QKGTCEQGPH 10
Q GTC G H
Sbjct: 313 QAGTCRVGLH 322
>sp|VG68_ICHVA|UNCHARACTERIZED protein ORF68|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 QKGTCEQ 7
+ GTCEQ
Sbjct: 49 RNGTCEQ 55
>sp|VG41_ICHVA|UNCHARACTERIZED protein ORF41|Ictalurid herpesvirus 1 (strain Auburn)
Query: 2 KGTCEQGPH 10
+GTCE H
Sbjct: 210 EGTCEAADH 218
>sp|CBL_MLVCN|TRANSFORMING protein cbl|Cas-NS-1 murine leukemia virus
Query: 3 GTCEQGPH 10
G CE PH
Sbjct: 381 GLCEPTPH 388
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 QKGTCEQGPH 10
+KG C G H
Sbjct: 65 RKGDCRSGNH 74
>sp|CAPSH_ADES1|HEXON protein|Snake adenovirus serotype 1 (SnAdV-1)
Query: 2 KGTCEQGP 9
KGT ++GP
Sbjct: 99 KGTLDRGP 106
>sp|VB05_VACC8|TRUNCATED plaque-size/host range protein|Vaccinia virus (strain LC16m8)
Query: 4 TCEQGPH 10
TC+QG H
Sbjct: 47 TCDQGYH 53
68|Sequence|336|345|EQGPHQVPWM
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 3 GPHQVPWM 10
GPHQ W+
Sbjct: 510 GPHQSEWL 517
>sp|DEPOL_BPK05|PROBABLE tail spike protein|Klebsiella phage 0507-KN2-1 (Taipeivirus
Query: 3 GPHQVPW 9
PHQ+P+
Sbjct: 20 APHQIPF 26
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 5 HQVPWM 10
H++PW+
Sbjct: 1542 HEIPWI 1547
>sp|MCP_GAHVM|MAJOR capsid protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 3 GPHQVP 8
GPH VP
Sbjct: 576 GPHNVP 581
>sp|MATA2_BPQBE|MATURATION protein A2|Escherichia virus Qbeta (Bacteriophage Q-beta)
Query: 4 PHQVPW 9
PH+V W
Sbjct: 308 PHEVAW 313
>sp|CHMA_BPGOS|CHIMALLIN phage vB_EcoM_Goslar
Query: 1 EQGPH 5
EQGPH
Sbjct: 136 EQGPH 140
>sp|VPU_HV1BN|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 EQGPHQVPW 9
E G H PW
Sbjct: 69 EMGGHDAPW 77
>sp|POL_VILV1|GAG-POL polyprotein|Maedi visna virus (strain 1514
Query: 2 QGPHQVPW 9
QGP QV W
Sbjct: 1463 QGPTQVLW 1470
>sp|POL_VILVK|GAG-POL polyprotein|Maedi visna virus (strain KV1772)
Query: 2 QGPHQVPW 9
QGP QV W
Sbjct: 1463 QGPTQVLW 1470
>sp|POL_VILV2|GAG-POL polyprotein|Maedi visna virus (strain 1514
Query: 2 QGPHQVPW 9
QGP QV W
Sbjct: 1463 QGPTQVLW 1470
>sp|POL_VILV|GAG-POL polyprotein|Maedi visna virus (strain 1514)
Query: 2 QGPHQVPW 9
QGP QV W
Sbjct: 1463 QGPTQVLW 1470
>sp|VPR_SIVML|PROTEIN Vpr|Simian immunodeficiency virus (isolate K78)
Query: 2 QGPHQVPW 9
+GP + PW
Sbjct: 9 EGPQREPW 16
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 EQGPH 5
EQGPH
Sbjct: 275 EQGPH 279
69|Sequence|341|350|QVPWMEKAPA
>sp|P9_RGDV|MINOR outer capsid protein P9|Rice gall dwarf virus (RGDV)
Query: 3 PWMEKAP 9
PW+EK P
Sbjct: 177 PWLEKLP 183
>sp|RFCS3_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus
Query: 1 QVPWMEK 7
Q+PW+EK
Sbjct: 16 QLPWVEK 22
>sp|G4P_BPIKE|VIRION export protein|Salmonella phage IKe (Bacteriophage IKe)
Query: 2 VPWMEKAP 9
VPW E P
Sbjct: 400 VPWFESVP 407
>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)
Query: 1 QVPWME 6
QVPWM+
Sbjct: 1564 QVPWMK 1569
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 VPWMEKAP 9
+PWM AP
Sbjct: 259 LPWMNSAP 266
>sp|RFCS4_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus
Query: 2 VPWMEK 7
VPW+EK
Sbjct: 7 VPWIEK 12
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EKA A
Sbjct: 164 PWVEKASA 171
>sp|G4P_BPIF1|VIRION export protein|Escherichia phage If1 (Bacteriophage If1)
Query: 2 VPWMEKAP 9
VPW+ K P
Sbjct: 392 VPWVSKIP 399
>sp|RFCS1_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus
Query: 2 VPWMEK 7
+PW+EK
Sbjct: 5 IPWIEK 10
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 QVPWMEKAP 9
Q+P +EK P
Sbjct: 1436 QIPLLEKIP 1444
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 QVPWMEKAP 9
Q+P +EK P
Sbjct: 1436 QIPLLEKIP 1444
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 QVPWMEKAP 9
Q+P +EK P
Sbjct: 1436 QIPLLEKIP 1444
>sp|DPOL_BPKVM|DNA-DIRECTED DNA polymerase|Vibrio phage KVP40 (isolate Vibrio
Query: 4 WMEKAPA 10
W EK PA
Sbjct: 185 WREKTPA 191
>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 664 PWVEKQSA 671
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 654 PWVEKKSA 661
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAVSC|GENOME polyprotein|Simian hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKQSA 667
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 639 PWVEKESA 646
>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)
Query: 2 VPWMEK 7
+PW+EK
Sbjct: 1056 IPWLEK 1061
70|Sequence|346|355|EKAPAHLSLP
>sp|DPOL_IIV3|DNA polymerase 120R|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 EKAPAHLSL 9
+K PAH+ L
Sbjct: 933 DKLPAHIQL 941
>sp|UB222_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus
Query: 2 KAPAHLSL 9
K PAHL++
Sbjct: 235 KTPAHLAI 242
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 KAPAHLSLP 10
KAP H LP
Sbjct: 474 KAPKHEQLP 482
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 KAPAHLSLP 10
KAP H LP
Sbjct: 474 KAPKHEQLP 482
71|Sequence|351|360|HLSLPDPQAL
>sp|5057R_ASFB7|PROTEIN MGF 505-7R|African swine fever virus (strain
Query: 1 HLSLPDPQAL 10
+LS+P+P+A+
Sbjct: 186 NLSIPEPEAI 195
>sp|VP39_NPVOP|MAJOR capsid protein|Orgyia pseudotsugata multicapsid polyhedrosis virus
Query: 2 LSLPDPQA 9
LSL DPQA
Sbjct: 159 LSLTDPQA 166
>sp|YR380_MIMIV|PUTATIVE leucine-rich repeat protein R380|Acanthamoeba polyphaga mimivirus
Query: 4 LPDPQAL 10
LPDPQ L
Sbjct: 62 LPDPQYL 68
>sp|5057R_ASFM2|PROTEIN MGF 505-7R|African swine fever virus (isolate
Query: 1 HLSLPDPQAL 10
+LS+P+P A+
Sbjct: 186 NLSIPEPDAI 195
>sp|YL268_MIMIV|PUTATIVE serine/threonine-protein kinase L268|Acanthamoeba polyphaga
Query: 1 HLSLPDP 7
HL PDP
Sbjct: 478 HLGTPDP 484
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 LSLPDPQA 9
LSLP PQ+
Sbjct: 594 LSLPKPQS 601
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 HLSLPDP 7
H+ LPDP
Sbjct: 90 HVKLPDP 96
>sp|GLYC_MOPEI|PRE-GLYCOPROTEIN polyprotein GP complex|Mopeia virus (MOPV)
Query: 1 HLSLPD 6
HLS+PD
Sbjct: 140 HLSIPD 145
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 1 HLSLPDPQA 9
HL LP+ QA
Sbjct: 573 HLPLPERQA 581
>sp|CAPSD_AAV2S|CAPSID protein VP1|Adeno-associated virus 2 (isolate Srivastava/1982)
Query: 3 SLPDPQAL 10
S+PDPQ L
Sbjct: 181 SVPDPQPL 188
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 HLSLPDP 7
H+ LPDP
Sbjct: 89 HVKLPDP 95
>sp|ORF23_TTVV6|PROBABLE protein VP2|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 HLSLPDPQA 9
LS PDP+A
Sbjct: 201 QLSTPDPRA 209
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 HLSLPDP 7
H+ LPDP
Sbjct: 183 HVKLPDP 189
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 1 HLSLPDPQ 8
HL+L DP+
Sbjct: 585 HLNLKDPE 592
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 3 SLPDPQAL 10
++PDP+AL
Sbjct: 165 AVPDPEAL 172
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 3 SLPDPQAL 10
++PDP+AL
Sbjct: 165 AVPDPEAL 172
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 3 SLPDPQAL 10
++PDP+AL
Sbjct: 165 AVPDPEAL 172
72|Sequence|356|365|DPQALKRDVP
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 DPQALKRDV 9
+P+A KRDV
Sbjct: 311 EPEAWKRDV 319
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 DPQALKRDV 9
+P+A KRDV
Sbjct: 311 EPEAWKRDV 319
>sp|RAP94_VACCW|RNA polymerase-associated transcription-specificity factor
Query: 1 DPQALKRDV 9
+P+A KRDV
Sbjct: 311 EPEAWKRDV 319
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 DPQALKRDV 9
+P+A KRDV
Sbjct: 311 EPEAWKRDV 319
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 DPQALKRDV 9
+P+A KRDV
Sbjct: 311 EPEAWKRDV 319
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 DPQALKRDV 9
+P+A KRDV
Sbjct: 311 EPEAWKRDV 319
>sp|RDRP_AQRVG|RNA-DIRECTED RNA polymerase VP2|Aquareovirus G (isolate American grass
Query: 2 PQALKRDVP 10
PQA+ RD+P
Sbjct: 61 PQAIYRDLP 69
>sp|P26_BNYVS|PROTEIN P26|Beet necrotic yellow vein virus
Query: 1 DPQALKRD 8
DP+ LKRD
Sbjct: 119 DPKLLKRD 126
>sp|PHOSP_BDVV|PHOSPHOPROTEIN disease virus (strain V)
Query: 1 DPQALKRDVP 10
DPQ L+R+ P
Sbjct: 17 DPQTLRRERP 26
>sp|POLG_PPVEA|GENOME polyprotein|Plum pox potyvirus (strain El
Query: 5 LKRDVP 10
LKRDVP
Sbjct: 642 LKRDVP 647
>sp|POL_BLVAU|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Australian)
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 377 DPSHWKRDCP 386
>sp|GAG_BLVAU|GAG polyprotein|Bovine leukemia virus (isolate Australian)
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 377 DPSHWKRDCP 386
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 391 DPSHWKRDCP 400
>sp|POL_BLVJ|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Japanese
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 376 DPSHWKRDCP 385
>sp|GAG_BLVJ|GAG polyprotein|Bovine leukemia virus (isolate Japanese
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 377 DPSHWKRDCP 386
>sp|PRO_BLVJ|GAG-PRO polyprotein|Bovine leukemia virus (isolate Japanese
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 376 DPSHWKRDCP 385
>sp|PRO_BLVAU|GAG-PRO polyprotein|Bovine leukemia virus (isolate Australian)
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 377 DPSHWKRDCP 386
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 391 DPSHWKRDCP 400
73|Sequence|361|370|KRDVPCDNVS
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 2 RDVPCDNVS 10
+D PC+N+S
Sbjct: 1817 KDHPCENIS 1825
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 KRDVPCDNVS 10
K +VPC+N S
Sbjct: 146 KYEVPCENRS 155
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 KRDVPCDNVS 10
K +VPC+N S
Sbjct: 146 KYEVPCENRS 155
>sp|POL1_CPMVS|RNA1 polyprotein|Cowpea mosaic virus (strain SB)
Query: 3 DVPCDNV 9
D PCD V
Sbjct: 1204 DTPCDKV 1210
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC+NVS
Sbjct: 236 PCNNVS 241
>sp|CAPSD_MNSV|CAPSID protein|Melon necrotic spot virus (MNSV)
Query: 4 VPCDN 8
VPCDN
Sbjct: 207 VPCDN 211
>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky
Query: 3 DVPCDNV 9
D+PCD +
Sbjct: 1189 DLPCDKI 1195
>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)
Query: 3 DVPCD 7
D+PCD
Sbjct: 599 DIPCD 603
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 3 DVPCD 7
D+PCD
Sbjct: 600 DIPCD 604
>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)
Query: 3 DVPCD 7
D+PCD
Sbjct: 599 DIPCD 603
>sp|HELIC_BPT7|DNA helicase/primase|Escherichia phage T7 (Bacteriophage T7)
Query: 4 VPCDN 8
+PCDN
Sbjct: 15 IPCDN 19
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 RDVPCDN 8
+DV CDN
Sbjct: 176 KDVVCDN 182
>sp|YL035_MIMIV|PUTATIVE BTB/POZ domain-containing protein L35|Acanthamoeba polyphaga
Query: 2 RDVPCDN 8
+D+ CDN
Sbjct: 324 KDIECDN 330
74|Sequence|366|375|CDNVSSCPSS
>sp|POLG_AEVVR|GENOME polyprotein|Avian encephalomyelitis virus (strain Van
Query: 1 CDNVSSCP 8
C VSSCP
Sbjct: 1219 CQLVSSCP 1226
>sp|RIR1_SUHVK|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Suid herpesvirus 1 (strain Kaplan)
Query: 1 CDNVSSC 7
CDN+ SC
Sbjct: 381 CDNIFSC 387
>sp|POLG_AEVCA|GENOME polyprotein|Avian encephalomyelitis virus (strain Calnek
Query: 1 CDNVSSCP 8
C VSSCP
Sbjct: 1219 CQLVSSCP 1226
>sp|POLG_AEVL2|GENOME polyprotein|Avian encephalomyelitis virus (strain L2Z)
Query: 1 CDNVSSCP 8
C VSSCP
Sbjct: 1219 CQLVSSCP 1226
>sp|RIR1_BHV1C|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Bovine herpesvirus 1.1 (strain Cooper)
Query: 1 CDNVSSC 7
CDN+ SC
Sbjct: 328 CDNLFSC 334
>sp|S2_DPIRV|UNCHARACTERIZED protein S2|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)
Query: 2 DNVSSCPSS 10
DNV S P+S
Sbjct: 13 DNVESAPNS 21
>sp|YR355_MIMIV|PUTATIVE thiol protease R355|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CDNVSSCP 8
CD VS CP
Sbjct: 143 CDQVSVCP 150
>sp|GB_SHV21|ENVELOPE glycoprotein B|Saimiriine herpesvirus 2 (strain 11)
Query: 1 CDNVSSCPSS 10
CD +SCP++
Sbjct: 231 CDVDNSCPNA 240
75|Sequence|371|380|SCPSSDTCCQ
>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote
Query: 1 SCPSSDTCCQ 10
SCPS C Q
Sbjct: 2253 SCPSCMPCTQ 2262
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 3 PSSDTC 8
PSS+TC
Sbjct: 315 PSSETC 320
>sp|RNL1_NPVAC|PUTATIVE bifunctional polynucleotide kinase/RNA ligase|Autographa
Query: 3 PSSDTC 8
PS DTC
Sbjct: 637 PSDDTC 642
76|Sequence|376|385|DTCCQLTSGE
>sp|L_ALLVP|RNA-DIRECTED RNA polymerase L|Allpahuayo mammarenavirus (isolate
Query: 1 DTCCQLTSGE 10
D+ C+LT+G+
Sbjct: 730 DSSCELTAGQ 739
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 DTCCQLTS 8
DTCC + S
Sbjct: 1638 DTCCSIDS 1645
>sp|PRIM_ASFWA|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate
Query: 1 DTCCQL 6
+TCCQ+
Sbjct: 670 ETCCQM 675
>sp|PRIM_ASFP4|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate
Query: 1 DTCCQL 6
+TCCQ+
Sbjct: 670 ETCCQM 675
>sp|PRIM_ASFK5|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate
Query: 1 DTCCQL 6
+TCCQ+
Sbjct: 659 ETCCQM 664
>sp|PRIM_ASFB7|PUTATIVE helicase/primase complex protein|African swine fever virus (strain
Query: 1 DTCCQL 6
+TCCQ+
Sbjct: 670 ETCCQM 675
>sp|NSP1_ROTME|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 CCQLTS 8
CCQLT+
Sbjct: 45 CCQLTN 50
>sp|PRIM_ASFM2|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate
Query: 1 DTCCQL 6
+TCCQ+
Sbjct: 664 ETCCQM 669
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|L_MILVL|RNA-DIRECTED RNA polymerase L|Mirafiori lettuce virus (isolate
Query: 1 DTCCQLTSGE 10
D CC+++ E
Sbjct: 1608 DVCCEISDME 1617
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|NSP1_ROTEL|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Equine/United
Query: 3 CCQLT 7
CCQLT
Sbjct: 45 CCQLT 49
>sp|NSP1_ROTF6|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cat/Japan/FRV64/1989/G3P5B[3])
Query: 3 CCQLT 7
CCQLT
Sbjct: 45 CCQLT 49
>sp|NSP1_ROTD9|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Dog/United
Query: 3 CCQLT 7
CCQLT
Sbjct: 45 CCQLT 49
>sp|NSP1_ROTRA|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Rabbit/United
Query: 3 CCQLT 7
CCQLT
Sbjct: 45 CCQLT 49
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 CCQLT 7
CCQLT
Sbjct: 45 CCQLT 49
>sp|Y074_NPVOP|UNCHARACTERIZED 19.5 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 2 TCCQLT 7
TCC LT
Sbjct: 164 TCCDLT 169
>sp|NSP1_ROTTU|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Monkey/United
Query: 3 CCQLT 7
CCQLT
Sbjct: 45 CCQLT 49
>sp|NSP1_ROTEH|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Equine/United
Query: 3 CCQLT 7
CCQLT
Sbjct: 45 CCQLT 49
>sp|NSP1_ROTRH|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Monkey/United
Query: 3 CCQLT 7
CCQLT
Sbjct: 47 CCQLT 51
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 TCCQLTSGE 10
TCC L G+
Sbjct: 1364 TCCPLLCGK 1372
77|Sequence|381|390|LTSGEWGCCP
>sp|NING_BPVT2|PROTEIN ninG|Enterobacteria phage VT2-Sa (Bacteriophage VT2-Sa)
Query: 3 SGEWGCCP 10
S +W CCP
Sbjct: 21 SNQWWCCP 28
>sp|NING_BP933|PROTEIN ninG|Escherichia phage 933W (Bacteriophage 933W)
Query: 3 SGEWGCCP 10
S +W CCP
Sbjct: 21 SNQWWCCP 28
>sp|HELI1_HVAVE|PUTATIVE ATP-dependent RNA helicase|Heliothis virescens ascovirus 3e
Query: 3 SGEWGCCP 10
SG W CP
Sbjct: 817 SGSWVSCP 824
>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 TSGEWGC 8
T EWGC
Sbjct: 11 TRNEWGC 17
>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LTSGEWGC 8
LTSG+ GC
Sbjct: 210 LTSGKMGC 217
>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LTSGEWGC 8
LTSG+ GC
Sbjct: 210 LTSGKMGC 217
>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LTSGEWGC 8
LTSG+ GC
Sbjct: 210 LTSGKMGC 217
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 TSGEWGCCP 10
T G +GC P
Sbjct: 799 TKGMYGCSP 807
>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate
Query: 1 LTSGEWGC 8
L SG+W C
Sbjct: 1350 LRSGKWEC 1357
>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)
Query: 5 EWGC 8
EWGC
Sbjct: 799 EWGC 802
>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)
Query: 2 TSGEW 6
TSGEW
Sbjct: 433 TSGEW 437
>sp|POLG_ASGVK|GENOME polyprotein|Apple stem grooving virus (strain
Query: 2 TSGEW 6
TSGEW
Sbjct: 1685 TSGEW 1689
>sp|MVP_PEMVC|P3N-PIPO polyprotein|Pepper mottle virus (isolate California)
Query: 2 TSGEW 6
TSGEW
Sbjct: 433 TSGEW 437
>sp|M2_I07A0|MATRIX protein 2|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 5 EWGC 8
EWGC
Sbjct: 11 EWGC 14
>sp|VDHR_BP186|PROTEIN dhr|Escherichia phage 186 (Bacteriophage 186)
Query: 5 EWGCC 9
EW CC
Sbjct: 36 EWECC 40
>sp|DPOL_BPSP2|DNA polymerase|Bacillus phage SP02 (Bacteriophage SP02)
Query: 1 LTSGEWG 7
L SG+WG
Sbjct: 555 LESGKWG 561
>sp|SERDT_BPSAV|SERINYLTRANSFERASE phage ViI
Query: 6 WGCC 9
WGCC
Sbjct: 83 WGCC 86
>sp|TEG7_ALHV1|TEGUMENT protein UL51 homolog|Alcelaphine herpesvirus 1 (strain C500)
Query: 5 EWGCC 9
EW CC
Sbjct: 7 EWTCC 11
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LTSGEWGCC 9
LTS GCC
Sbjct: 1330 LTSSMRGCC 1338
>sp|RLIG2_BPT4|RNA ligase 2|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 LTSGEW 6
LT GEW
Sbjct: 25 LTGGEW 30
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 1 LTSGEWGCCP 10
+ G W C P
Sbjct: 874 ILGGNWTCVP 883
>sp|M2_I96A3|MATRIX protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I00A1|MATRIX protein 2|Influenza A virus (strain A/New
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|PLOD_MIMIV|PROCOLLAGEN lysyl hydroxylase and glycosyltransferase|Acanthamoeba polyphaga
Query: 1 LTSGEWGC 8
+T+GE GC
Sbjct: 69 MTNGEVGC 76
>sp|Y017_HVAVE|UNCHARACTERIZED protein ORF17|Heliothis virescens ascovirus 3e (HvAV-3e)
Query: 1 LTSGEWGCCP 10
+ EW C P
Sbjct: 176 MNYAEWACSP 185
>sp|M2_I18A0|MATRIX protein 2|Influenza A virus (strain A/Brevig
Query: 2 TSGEWGC 8
T EWGC
Sbjct: 11 TRNEWGC 17
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 5 EWGCCP 10
EW CP
Sbjct: 171 EWNMCP 176
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 LTSGEWG 7
L+SG WG
Sbjct: 951 LSSGSWG 957
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 5 EWGCCP 10
EW CP
Sbjct: 172 EWNLCP 177
>sp|M2_I82A9|MATRIX protein 2|Influenza A virus (strain A/Philippines/2/1982
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I33A0|MATRIX protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 TSGEWGC 8
T EWGC
Sbjct: 11 TRSEWGC 17
>sp|M2_I77AB|MATRIX protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I77AA|MATRIX protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I45A0|MATRIX protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I81A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I80A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I79A0|MATRIX protein 2|Influenza A virus (strain A/Bangkok/1/1979
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I57A3|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I57A2|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I89A2|MATRIX protein 2|Influenza A virus (strain A/Beijing/353/1989
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I88A5|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I88A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I83A8|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I68A5|MATRIX protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I54A2|MATRIX protein 2|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I51A0|MATRIX protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I50A0|MATRIX protein 2|Influenza A virus (strain A/Fort
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I43A0|MATRIX protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I78A8|MATRIX protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I78A7|MATRIX protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I60A0|MATRIX protein 2|Influenza A virus (strain A/Ann
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I57A5|MATRIX protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I57A1|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I73A5|MATRIX protein 2|Influenza A virus (strain A/Port
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I72A8|MATRIX protein 2|Influenza A virus (strain A/Udorn/1972
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I72A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I72A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I72A2|MATRIX protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I71A1|MATRIX protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I70A0|MATRIX protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I68A6|MATRIX protein 2|Influenza A virus (strain A/Northern
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I68A4|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I68A0|MATRIX protein 2|Influenza A virus (strain A/Aichi/2/1968
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I96A2|MATRIX protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I37A0|MATRIX protein 2|Influenza A virus (strain A/Swine/29/1937
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|VG34_EHV1B|GENE 34 protein|Equine herpesvirus 1 (strain Ab4p)
Query: 1 LTSGEWGCCP 10
+TSG W P
Sbjct: 126 MTSGNWAYVP 135
>sp|M2_I57A0|MATRIX protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I83A1|MATRIX protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I80AA|MATRIX protein 2|Influenza A virus (strain A/India/6263/1980
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I76A6|MATRIX protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I67A0|MATRIX protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
78|Sequence|386|395|WGCCPIPEAV
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 GCCPIPE 8
CC +PE
Sbjct: 1208 ACCSLPE 1214
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 GCCPIPE 8
CC +PE
Sbjct: 1208 ACCSLPE 1214
>sp|NEC1_GAHVM|NUCLEAR egress protein 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 2 GCCP 5
GCCP
Sbjct: 104 GCCP 107
>sp|NEC1_EHV1B|NUCLEAR egress protein 1|Equine herpesvirus 1 (strain Ab4p)
Query: 2 GCCP 5
GCCP
Sbjct: 129 GCCP 132
>sp|NSP1_ROTSH|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Monkey/South
Query: 3 CCPIPEA 9
C P+P+A
Sbjct: 30 CMPVPDA 36
>sp|NSP1_ROTS4|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/SA11-4F/G3P6[1]) (RV-A)
Query: 3 CCPIPEA 9
C P+P+A
Sbjct: 30 CMPVPDA 36
>sp|NEC2_GAHVM|NUCLEAR egress protein 2|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 2 GCCPIP 7
GC PIP
Sbjct: 211 GCIPIP 216
>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus
Query: 3 CCPIPEA 9
C P+PEA
Sbjct: 269 CLPLPEA 275
Query: 1 WGCCPIPEAV 10
+GC P P AV
Sbjct: 60 FGCNPHPHAV 69
>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain
Query: 2 GCCP 5
GCCP
Sbjct: 469 GCCP 472
>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)
Query: 3 CCPIPEA 9
C PIP+A
Sbjct: 1452 CAPIPQA 1458
>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3
Query: 2 GCCP 5
GCCP
Sbjct: 481 GCCP 484
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 WGCCPI 6
WG CP+
Sbjct: 2492 WGFCPL 2497
>sp|DPOL_ADECT|DNA polymerase|Canine adenovirus serotype 2 (strain
Query: 2 GCCP 5
GCCP
Sbjct: 470 GCCP 473
>sp|NING_BPVT2|PROTEIN ninG|Enterobacteria phage VT2-Sa (Bacteriophage VT2-Sa)
Query: 1 WGCCP 5
W CCP
Sbjct: 24 WWCCP 28
>sp|NING_BP933|PROTEIN ninG|Escherichia phage 933W (Bacteriophage 933W)
Query: 1 WGCCP 5
W CCP
Sbjct: 24 WWCCP 28
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 GCCP 5
GCCP
Sbjct: 119 GCCP 122
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 GCCP 5
GCCP
Sbjct: 385 GCCP 388
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 1 WGCCP 5
+GCCP
Sbjct: 105 YGCCP 109
>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)
Query: 1 WGCCPI 6
WGCC I
Sbjct: 425 WGCCRI 430
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 2 GCCP 5
GCCP
Sbjct: 120 GCCP 123
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 GCCP 5
GCCP
Sbjct: 512 GCCP 515
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 GCCP 5
GCCP
Sbjct: 446 GCCP 449
79|Sequence|391|400|IPEAVCCSDH
>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore
Query: 2 PEAVCC 7
P+AVCC
Sbjct: 174 PDAVCC 179
>sp|RDRP_ORSVC|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Korean
Query: 2 PEAVCC 7
P+AVCC
Sbjct: 174 PDAVCC 179
>sp|YL248_MIMIV|UNCHARACTERIZED protein L248|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 IPEAVCC 7
IPE +CC
Sbjct: 124 IPEKMCC 130
>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)
Query: 3 EAVCCSD 9
EA+CC D
Sbjct: 840 EAICCVD 846
>sp|RDRP_BOTVF|RNA replication protein|Botrytis virus F (isolate Botrytis
Query: 1 IPEAVCC 7
IP+A CC
Sbjct: 1171 IPDAYCC 1177
>sp|RDRP_TMGMV|REPLICASE large subunit|Tobacco mild green mosaic virus
Query: 2 PEAVCCS 8
P VCCS
Sbjct: 174 PNEVCCS 180
>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 2 PEAVCCSDH 10
P+ VC +DH
Sbjct: 333 PDHVCKADH 341
>sp|MVP_ZYMVC|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain
Query: 2 PEAVCCSDH 10
P+ VC +DH
Sbjct: 333 PDHVCKADH 341
>sp|POL2_SDVS5|RNA2 polyprotein|Satsuma dwarf virus (isolate Satsuma
Query: 1 IPEAVCCSDH 10
+P+ +C S H
Sbjct: 307 VPQVMCSSRH 316
>sp|YR736_MIMIV|UNCHARACTERIZED protein R736|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 IPEAVCC 7
I EA+CC
Sbjct: 30 INEAICC 36
>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)
Query: 3 EAVCCSDH 10
+ +CCS H
Sbjct: 1980 DQLCCSHH 1987
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 6 CCSDH 10
CC DH
Sbjct: 230 CCRDH 234
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 6 CCSDH 10
CC DH
Sbjct: 230 CCRDH 234
>sp|VF345_ASFB7|PROTEIN D345L|African swine fever virus (strain
Query: 3 EAVCCSD 9
E +CCS+
Sbjct: 322 EKICCSE 328
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)
Query: 6 CCSDH 10
CC DH
Sbjct: 230 CCRDH 234
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 CCSDH 10
CC DH
Sbjct: 230 CCRDH 234
80|Sequence|396|405|CCSDHQHCCP
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CCSDHQH 7
CC DH+H
Sbjct: 230 CCRDHEH 236
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CCSDHQH 7
CC DH+H
Sbjct: 230 CCRDHEH 236
>sp|SPIKE_FIPV|SPIKE glycoprotein|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 2 CSDHQHC 8
C D++HC
Sbjct: 252 CEDYEHC 258
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 1 CCSDHQH 7
CC DH H
Sbjct: 230 CCRDHGH 236
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CCSDHQH 7
CC +H+H
Sbjct: 230 CCREHEH 236
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)
Query: 1 CCSDHQH 7
CC DH H
Sbjct: 230 CCRDHGH 236
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 CCSDHQH 7
CC +H+H
Sbjct: 230 CCREHEH 236
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 CCSDHQH 7
CC +H+H
Sbjct: 230 CCREHEH 236
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CCSDHQH 7
CC +H+H
Sbjct: 230 CCREHEH 236
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 CCSDHQH 7
CC +H+H
Sbjct: 230 CCREHEH 236
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 CCSDHQH 7
CC +H+H
Sbjct: 230 CCREHEH 236
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 DHQHCCP 10
+H+H CP
Sbjct: 347 EHRHLCP 353
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DHQHCCP 10
+H+H CP
Sbjct: 347 EHRHLCP 353
>sp|GT041_SIFVH|PUTATIVE glycosyltransferase 41|Sulfolobus islandicus filamentous virus
Query: 2 CSDHQHC 8
C D++HC
Sbjct: 271 CVDNKHC 277
>sp|VNS2_AHSV|NON-STRUCTURAL protein NS2|African horse sickness virus (AHSV)
Query: 5 HQHCC 9
H HCC
Sbjct: 346 HYHCC 350
>sp|OBP_BHV1C|REPLICATION origin-binding protein|Bovine herpesvirus 1.1 (strain Cooper)
Query: 1 CCSDHQHCCP 10
CCS C P
Sbjct: 434 CCSFRAACAP 443
>sp|VLTF1_VAR67|LATE transcription factor 1|Variola virus (isolate
Query: 1 CCSDHQH 7
C S HQH
Sbjct: 161 CISQHQH 167
>sp|VLTF1_VACCW|LATE transcription factor 1|Vaccinia virus (strain Western Reserve)
Query: 1 CCSDHQH 7
C S HQH
Sbjct: 161 CISQHQH 167
>sp|VLTF1_VACCC|LATE transcription factor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CCSDHQH 7
C S HQH
Sbjct: 161 CISQHQH 167
>sp|VLTF1_VACCA|LATE transcription factor 1|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CCSDHQH 7
C S HQH
Sbjct: 161 CISQHQH 167
>sp|Y102_AFV1Y|UNCHARACTERIZED protein ORF102|Acidianus filamentous virus 1 (isolate
Query: 2 CSDHQHC 8
CSD HC
Sbjct: 56 CSDCYHC 62
>sp|MYB_AVIMB|TRANSFORMING protein Myb|Avian myeloblastosis virus (AMV)
Query: 1 CCSDHQHCCP 10
C +H HC P
Sbjct: 276 CLGEHHHCTP 285
>sp|YR468_MIMIV|UNCHARACTERIZED protein R468|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 CSDHQHCC 9
C ++Q CC
Sbjct: 211 CKENQACC 218
>sp|COLL7_MIMIV|COLLAGEN-LIKE protein 7|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 CSDHQHCCP 10
C++H+ C P
Sbjct: 77 CNNHRCCYP 85
>sp|MYBE_AVILE|P135GAG-MYB-ETS-TRANSFORMING protein|Avian leukemia virus E26
Query: 1 CCSDHQHCCP 10
C +H HC P
Sbjct: 162 CLGEHHHCTP 171
>sp|ENV_EIAVW|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 2 CSDHQHC 8
C+D HC
Sbjct: 169 CTDSDHC 175
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|YL264_MIMIV|UNCHARACTERIZED WD repeat-containing protein L264|Acanthamoeba polyphaga mimivirus
Query: 1 CCSDHQHCC 9
CC++ CC
Sbjct: 421 CCANKNSCC 429
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2048 CCLDTASFCP 2057
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2034 CCLDTASFCP 2043
>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2046 CCLDTASFCP 2055
>sp|ENV_EIAV1|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 CSDHQHC 8
C+D HC
Sbjct: 169 CTDSDHC 175
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2042 CCLDTASFCP 2051
>sp|ENV_EIAVY|ENVELOPE glycoprotein|Equine infectious anemia virus (strain
Query: 2 CSDHQHC 8
C+D HC
Sbjct: 169 CTDSDHC 175
>sp|ENV_EIAVC|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 CSDHQHC 8
C+D HC
Sbjct: 169 CTDSDHC 175
>sp|ENV_EIAV9|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 CSDHQHC 8
C+D HC
Sbjct: 169 CTDSDHC 175
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2042 CCLDTASFCP 2051
>sp|ENV_EIAV3|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 CSDHQHC 8
C+D HC
Sbjct: 169 CTDSDHC 175
>sp|ENV_EIAV2|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 CSDHQHC 8
C+D HC
Sbjct: 169 CTDSDHC 175
>sp|ENV_EIAV5|ENVELOPE glycoprotein|Equine infectious anemia virus (isolate
Query: 2 CSDHQHC 8
C+D HC
Sbjct: 169 CTDSDHC 175
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2023 CCLDTATFCP 2032
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2043 CCLDTATFCP 2052
>sp|Y030_NPVOP|UNCHARACTERIZED 52.7 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 CCSDHQH 7
C S H+H
Sbjct: 380 CASQHEH 386
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2020 CCLDTATFCP 2029
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2016 CCLDTATFCP 2025
>sp|NS1_ADVG|INITIATOR protein NS1|Aleutian mink disease parvovirus (strain
Query: 5 HQHCC 9
H HCC
Sbjct: 125 HIHCC 129
81|Sequence|401|410|QHCCPQGYTC
>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)
Query: 3 CCPQGY 8
CCP GY
Sbjct: 446 CCPGGY 451
>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus
Query: 1 QHCCPQG 7
+H CPQG
Sbjct: 101 EHNCPQG 107
>sp|MATRX_TUPVT|MATRIX protein|Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV)
Query: 5 PQGYTC 10
PQGY C
Sbjct: 39 PQGYQC 44
>sp|NS4_BANNV|NON-STRUCTURAL protein 4|Banna virus (BAV)
Query: 2 HCCPQGYTC 10
+CCP + C
Sbjct: 9 NCCPGRFVC 17
>sp|YR787_MIMIV|PUTATIVE ankyrin repeat protein R787|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 HCCPQGYT 9
H C +GYT
Sbjct: 311 HACKKGYT 318
>sp|RDRP_BPSP|RNA-DIRECTED RNA polymerase subunit beta|Enterobacteria phage SP (Bacteriophage
Query: 1 QHCCPQGYT 9
+H CPQ T
Sbjct: 170 KHACPQDVT 178
>sp|POLG_WMV2U|GENOME polyprotein|Watermelon mosaic virus II (isolate
Query: 3 CCPQGYT 9
CC QG++
Sbjct: 550 CCKQGWS 556
>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)
Query: 3 CCPQGYT 9
CC QG++
Sbjct: 2615 CCKQGWS 2621
>sp|POL_RSVSB|GAG-POL polyprotein|Rous sarcoma virus subgroup B
Query: 5 PQGYTC 10
PQG TC
Sbjct: 855 PQGMTC 860
>sp|POL_ALVA|GAG-POL polyprotein|Avian leukosis virus subgroup A
Query: 5 PQGYTC 10
PQG TC
Sbjct: 855 PQGMTC 860
>sp|POL_ALV|GAG-POL polyprotein|Avian leukosis virus (ALV)
Query: 5 PQGYTC 10
PQG TC
Sbjct: 855 PQGMTC 860
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|POL_RSVP|GAG-POL polyprotein|Rous sarcoma virus subgroup C
Query: 5 PQGYTC 10
PQG TC
Sbjct: 855 PQGMTC 860
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3B|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (BPIV-3)
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|SCAF_GAHVM|CAPSID scaffolding protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 QHCCPQGY 8
QH P GY
Sbjct: 378 QHSIPSGY 385
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|YR069_MIMIV|UNCHARACTERIZED protein R69|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 QHCCPQGYTC 10
Q C P+ Y C
Sbjct: 146 QFCIPKNYIC 155
>sp|POL2_SQMVM|RNA2 polyprotein|Squash mosaic virus (strain melon)
Query: 2 HCCPQGYTC 10
H C Q Y C
Sbjct: 3 HFCEQVYEC 11
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 4 CPQGYTC 10
CP G TC
Sbjct: 286 CPWGNTC 292
>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)
Query: 2 HCCPQG 7
H CP+G
Sbjct: 1148 HLCPEG 1153
82|Sequence|406|415|QGYTCVAEGQ
>sp|HMUD2_BPSAV|5-HMDU DNA kinase 2|Salmonella phage ViI
Query: 1 QGYTCVAEGQ 10
QGYT V EG+
Sbjct: 98 QGYTLVCEGE 107
>sp|VG58_BPML5|GENE 58 protein|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 1 QGYTCVAEG 9
QGY C+A G
Sbjct: 48 QGYNCMACG 56
>sp|V14_VACCW|ANKYRIN repeat protein 14|Vaccinia virus (strain Western Reserve)
Query: 2 GYTCVA 7
GYTC+A
Sbjct: 61 GYTCIA 66
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 GYTCVA 7
GYTC+A
Sbjct: 492 GYTCIA 497
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 GYTCVA 7
GYTC+A
Sbjct: 492 GYTCIA 497
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 YTCVAEGQ 10
YTC AE Q
Sbjct: 2577 YTCAAERQ 2584
>sp|HEMA_CVPV|HEMAGGLUTININ-ESTERASE coronavirus (PV) (Puffinosis virus)
Query: 1 QGYTCVAEG 9
G+ C+AEG
Sbjct: 114 HGFKCLAEG 122
>sp|GLYC_GOGV|GLYCOPROTEIN 1 reptarenavirus (isolate AlRrV1/Boa/USA/BC/2009)
Query: 2 GYTCVA 7
GYTC+A
Sbjct: 226 GYTCIA 231
>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate
Query: 3 YTCVAEGQ 10
Y C EGQ
Sbjct: 473 YKCTGEGQ 480
>sp|NS1_MPRVN|PUTATIVE non-structural protein 1|Micromonas pusilla reovirus (isolate
Query: 1 QGYTCVAE 8
+G+TCV E
Sbjct: 16 RGFTCVLE 23
>sp|RPB2_ASFWA|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate
Query: 2 GYTCVAE 8
GY CVA+
Sbjct: 551 GYICVAQ 557
>sp|RPB2_ASFP4|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate
Query: 2 GYTCVAE 8
GY CVA+
Sbjct: 551 GYICVAQ 557
>sp|RPB2_ASFM2|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate
Query: 2 GYTCVAE 8
GY CVA+
Sbjct: 551 GYICVAQ 557
>sp|RPB2_ASFK5|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate
Query: 2 GYTCVAE 8
GY CVA+
Sbjct: 551 GYICVAQ 557
>sp|RPB2_ASFB7|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (strain
Query: 2 GYTCVAE 8
GY CVA+
Sbjct: 551 GYICVAQ 557
>sp|AEPE_BPA50|L-ALANYL-D-GLUTAMATE peptidase|Listeria phage A500 (Bacteriophage A500)
Query: 3 YTCVAEG 9
Y CVA+G
Sbjct: 42 YLCVAQG 48
83|Sequence|411|420|VAEGQCQRGS
>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41
Query: 2 AEGQCQRGS 10
AEG+C+ GS
Sbjct: 186 AEGECELGS 194
>sp|M21_TRTV|PROTEIN M2-1|Turkey rhinotracheitis virus (TRTV)
Query: 4 GQCQRGS 10
G+C RGS
Sbjct: 13 GKCNRGS 19
>sp|M21_AMPV1|PROTEIN M2-1|Avian metapneumovirus (isolate Canada
Query: 4 GQCQRGS 10
G+C RGS
Sbjct: 13 GKCNRGS 19
>sp|M21_HMPVC|PROTEIN M2-1|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 GQCQRGS 10
G+C RGS
Sbjct: 13 GKCNRGS 19
>sp|HEMA_I76AJ|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 4 GQCQRGS 10
G C+RGS
Sbjct: 152 GSCRRGS 158
>sp|VG59_EHV1V|UNCHARACTERIZED gene 59 protein|Equine herpesvirus 1 (strain V592)
Query: 3 EGQCQRG 9
EGQ QRG
Sbjct: 132 EGQTQRG 138
>sp|VG59_EHV1B|UNCHARACTERIZED gene 59 protein|Equine herpesvirus 1 (strain Ab4p)
Query: 3 EGQCQRG 9
EGQ QRG
Sbjct: 132 EGQTQRG 138
84|Sequence|416|425|CQRGSEIVAG
>sp|UNG_GAHVM|URACIL-DNA glycosylase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 CQRGSEIVA 9
C RGSEI+A
Sbjct: 107 CLRGSEILA 115
85|Sequence|421|430|EIVAGLEKMP
>sp|YL085_MIMIV|PUTATIVE BTB/POZ domain-containing protein L85|Acanthamoeba polyphaga
Query: 1 EIVAGLEKMP 10
EI+ LEK+P
Sbjct: 113 EIIKDLEKIP 122
>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)
Query: 2 IVAGLEKM 9
IVAGL+K+
Sbjct: 24 IVAGLDKL 31
>sp|RDRP_PVXX3|RNA replication protein|Potato virus X (strain X3)
Query: 1 EIVAGLEK 8
E+V+GLEK
Sbjct: 650 EMVSGLEK 657
>sp|RDRP_PVX|RNA replication protein|Potato virus X (PVX)
Query: 1 EIVAGLEK 8
E+V+GLEK
Sbjct: 650 EMVSGLEK 657
>sp|NS1A_TASV1|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 1 (TAstV-1)
Query: 2 IVAGLEKM 9
IVAGL+K+
Sbjct: 24 IVAGLDKL 31
86|Sequence|426|435|LEKMPARRAS
***** No hits found ******
87|Sequence|431|440|ARRASLSHPR
>sp|VE1_BPV6|REPLICATION protein E1|Bos taurus papillomavirus 6 (Bovine
Query: 1 ARRASLSHPR 10
AR+ SLSH R
Sbjct: 301 ARQTSLSHQR 310
88|Sequence|436|445|LSHPRDIGCD
>sp|GG_EHV1K|ENVELOPE glycoprotein G|Equine herpesvirus 1 (strain Kentucky
Query: 3 HPRDIGC 9
HPR +GC
Sbjct: 204 HPRAVGC 210
>sp|GG_EHV1V|ENVELOPE glycoprotein G|Equine herpesvirus 1 (strain V592)
Query: 3 HPRDIGC 9
HPR +GC
Sbjct: 204 HPRAVGC 210
>sp|GG_EHV1B|ENVELOPE glycoprotein G|Equine herpesvirus 1 (strain Ab4p)
Query: 3 HPRDIGC 9
HPR +GC
Sbjct: 204 HPRAVGC 210
>sp|GG_EHV4|ENVELOPE glycoprotein G|Equine herpesvirus 4 (strain 1942)
Query: 3 HPRDIGC 9
HPR +GC
Sbjct: 203 HPRAVGC 209
>sp|MB43_GAHVM|MEMBRANE protein UL43 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 LSHPRDIGC 9
L HP +GC
Sbjct: 244 LRHPSRLGC 252
>sp|Y098_NPVOP|UNCHARACTERIZED 36.0 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 LSHPRDIGC 9
LS RD+GC
Sbjct: 158 LSELRDLGC 166
>sp|GI_PSHV1|ENVELOPE glycoprotein I|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 LSHPRDIGCD 10
LSH DIG D
Sbjct: 389 LSHRNDIGGD 398
>sp|VG67_ICHVA|UNCHARACTERIZED protein ORF67|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 LSHPRDIGC 9
L+HP GC
Sbjct: 1419 LTHPVTFGC 1427
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 HPRDIGCD 10
HP + CD
Sbjct: 4698 HPNTVDCD 4705
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 HPRDIGCD 10
HP + CD
Sbjct: 4718 HPNTVDCD 4725
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 HPRDIGCD 10
HP + CD
Sbjct: 4748 HPNTVDCD 4755
89|Sequence|441|450|DIGCDQHTSC
>sp|YL146_MIMIV|UNCHARACTERIZED protein L146|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 IGCDQHTSC 10
+G D HT+C
Sbjct: 328 LGLDNHTTC 336
>sp|NSP5_ROTH6|NON-STRUCTURAL protein 5|Rotavirus A (strain
Query: 1 DIGCDQ 6
DIGCDQ
Sbjct: 102 DIGCDQ 107
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 DIGCDQHTSC 10
D+G H SC
Sbjct: 744 DVGAGAHYSC 753
>sp|V022_FOWPN|PUTATIVE ankyrin repeat protein FPV022|Fowlpox virus (strain NVSL) (FPV)
Query: 1 DIGCD 5
DIGCD
Sbjct: 244 DIGCD 248
>sp|D13_SWPVK|SCAFFOLD protein D13 ortholog|Swinepox virus (strain Kasza) (SWPV)
Query: 1 DIGCDQH 7
D CDQH
Sbjct: 46 DSNCDQH 52
>sp|VP4_FDVS|UNCHARACTERIZED protein VP4|Fiji disease virus (isolate Sugarcane)
Query: 2 IGCDQH 7
IGCD H
Sbjct: 229 IGCDLH 234
>sp|TG21_GAHVM|TEGUMENT protein UL21 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 4 CDQHTS 9
CD HTS
Sbjct: 385 CDHHTS 390
>sp|POLS_SAV2|STRUCTURAL polyprotein|Alphavirus salmon subtype 2 (SAV2)
Query: 1 DIGCDQHTS 9
D+ CD HT+
Sbjct: 946 DVHCDVHTN 954
>sp|POLS_SAV3|STRUCTURAL polyprotein|Alphavirus salmon subtype 3 (SAV3)
Query: 1 DIGCDQHTS 9
D+ CD HT+
Sbjct: 944 DVHCDVHTN 952
>sp|POLS_SAV1|STRUCTURAL polyprotein|Alphavirus salmon subtype 1 (SAV1)
Query: 1 DIGCDQHTS 9
D+ CD HT+
Sbjct: 945 DVHCDVHTN 953
>sp|VS48_TBRVS|SATELLITE RNA 48 kDa protein|Tomato black ring virus satellite
Query: 2 IGCDQHT 8
+ CD HT
Sbjct: 281 VSCDDHT 287
>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)
Query: 1 DIGCDQH 7
D+ CD H
Sbjct: 2050 DLSCDNH 2056
90|Sequence|446|455|QHTSCPVGQT
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 QHTSCPVGQ 9
QHT VGQ
Sbjct: 1130 QHTETSVGQ 1138
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 QHTSCPVGQ 9
QHT VGQ
Sbjct: 1129 QHTDTSVGQ 1137
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 QHTSCPVGQ 9
QHT VGQ
Sbjct: 1131 QHTDTSVGQ 1139
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 QHTSCPVGQ 9
QHT VGQ
Sbjct: 1150 QHTDTSVGQ 1158
>sp|YR472_MIMIV|UNCHARACTERIZED protein R472|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 TSCPVG 8
T+CP+G
Sbjct: 1149 TNCPIG 1154
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QHTSCPV 7
+HTSCP
Sbjct: 101 RHTSCPF 107
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QHTSCPV 7
+HTSCP
Sbjct: 101 RHTSCPF 107
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QHTSCP 6
+HTSCP
Sbjct: 101 RHTSCP 106
>sp|POLS_SAV2|STRUCTURAL polyprotein|Alphavirus salmon subtype 2 (SAV2)
Query: 4 SCPVGQT 10
+CPVGQ+
Sbjct: 468 NCPVGQS 474
>sp|POLS_SAV1|STRUCTURAL polyprotein|Alphavirus salmon subtype 1 (SAV1)
Query: 4 SCPVGQT 10
+CPVGQ+
Sbjct: 467 NCPVGQS 473
>sp|B3_HHV6Z|PROTEIN B3|Human herpesvirus 6B (strain Z29)
Query: 1 QHTSCP 6
+HTSCP
Sbjct: 54 KHTSCP 59
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 QHTSCPVG 8
HT+CP G
Sbjct: 2025 MHTTCPCG 2032
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 HTSCPVG 8
HT+CP G
Sbjct: 2027 HTTCPCG 2033
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 4 SCPVGQT 10
SCP+G++
Sbjct: 160 SCPIGES 166
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 145 SCPVGE 150
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 145 SCPVGE 150
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I73A0|NEURAMINIDASE A virus (strain A/Parrot/Ulster/1973
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 132 SCPVGE 137
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 141 SCPVGE 146
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 141 SCPVGE 146
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 144 SCPVGE 149
91|Sequence|451|460|PVGQTCCPSL
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 2 VGQTCCPSL 10
+GQT PSL
Sbjct: 824 IGQTAVPSL 832
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 2 VGQTCCPSL 10
+GQT PSL
Sbjct: 822 IGQTAVPSL 830
>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)
Query: 4 QTCCPSL 10
+CCP+L
Sbjct: 138 HSCCPNL 144
>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)
Query: 4 QTCCPSL 10
+CCP+L
Sbjct: 138 HSCCPNL 144
>sp|MU1_REOVJ|OUTER capsid protein mu-1|Reovirus type 2 (strain D5/Jones)
Query: 1 PVGQTCCP 8
P+G+ CP
Sbjct: 204 PIGEVSCP 211
>sp|MU1_REOVD|OUTER capsid protein mu-1|Reovirus type 3 (strain Dearing)
Query: 1 PVGQTCCP 8
P+G+ CP
Sbjct: 204 PIGEVSCP 211
>sp|US9_EHV4|ENVELOPE protein US9 homolog|Equine herpesvirus 4 (strain 1942)
Query: 1 PVGQTCCP 8
P+G CCP
Sbjct: 37 PIGGDCCP 44
>sp|MU1_REOVL|OUTER capsid protein mu-1|Reovirus type 1 (strain Lang)
Query: 1 PVGQTCCP 8
P+G+ CP
Sbjct: 204 PIGEVSCP 211
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 VGQTCCP 8
+ TCCP
Sbjct: 1636 LADTCCP 1642
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 VGQTCCP 8
+ TCCP
Sbjct: 1636 LADTCCP 1642
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PVGQTCCPS 9
P G++ CPS
Sbjct: 87 PTGRSICPS 95
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PVGQTCCPS 9
P G++ CPS
Sbjct: 97 PTGRSICPS 105
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PVGQTCCPS 9
P G++ CPS
Sbjct: 97 PTGRSICPS 105
>sp|RPB2_IIV6|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 6
Query: 2 VGQTCC 7
+G+TCC
Sbjct: 995 MGKTCC 1000
>sp|UL33_MUHVS|G-PROTEIN coupled receptor homolog M33|Murid herpesvirus 1 (strain Smith)
Query: 2 VGQTCCPSL 10
V TC PSL
Sbjct: 19 VNNTCAPSL 27
>sp|RDRP_SSDRV|RNA replication protein|Sclerotinia sclerotiorum
Query: 2 VGQTCCPSL 10
+G T CP L
Sbjct: 136 IGSTICPFL 144
>sp|C_NIPAV|PROTEIN C|Nipah virus
Query: 4 QTCCPSL 10
Q CCP L
Sbjct: 147 QRCCPML 153
>sp|C_HENDH|PROTEIN C|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 QTCCPSL 10
Q CCP L
Sbjct: 147 QRCCPML 153
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GQTCCPS 9
GQT CPS
Sbjct: 368 GQTPCPS 374
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 3 GQTCCPS 9
GQT CPS
Sbjct: 368 GQTPCPS 374
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 3 GQTCCPS 9
GQT CPS
Sbjct: 368 GQTPCPS 374
92|Sequence|456|465|CCPSLGGSWA
>sp|SPIKE_FIPV|SPIKE glycoprotein|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 3 PSLGGSW 9
PS+GGSW
Sbjct: 937 PSIGGSW 943
>sp|POLG_SUMVS|GENOME polyprotein|Sugarcane mosaic virus (strain SC)
Query: 1 CCPSLGGSW 9
C P++ GSW
Sbjct: 221 CSPNISGSW 229
>sp|SPIKE_CVCAI|SPIKE glycoprotein|Canine coronavirus (strain Insavc-1) (CCoV)
Query: 3 PSLGGSW 9
P++GGSW
Sbjct: 936 PNIGGSW 942
>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)
Query: 3 PSLGGSW 9
P++GGSW
Sbjct: 938 PNIGGSW 944
>sp|SPIKE_CVCBG|SPIKE glycoprotein|Canine coronavirus (strain BGF10) (CCoV)
Query: 3 PSLGGSW 9
P++GGSW
Sbjct: 938 PNIGGSW 944
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 1 CCPSLGGSWA 10
C P++G WA
Sbjct: 168 CTPAIGEHWA 177
>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus
Query: 3 PSLGGSW 9
P++GGSW
Sbjct: 932 PNIGGSW 938
>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus
Query: 3 PSLGGSW 9
P++GGSW
Sbjct: 932 PNIGGSW 938
>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus
Query: 3 PSLGGSW 9
P++GGSW
Sbjct: 934 PNIGGSW 940
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 CCPSLGGSWA 10
C P++G WA
Sbjct: 161 CVPAMGEHWA 170
>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus
Query: 3 PSLGGSW 9
P++GGSW
Sbjct: 934 PNIGGSW 940
>sp|POLG_MDMV|GENOME polyprotein|Maize dwarf mosaic virus (MDMV)
Query: 1 CCPSLGGSW 9
C P++ G+W
Sbjct: 236 CSPNINGNW 244
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 CCPSLGGSWA 10
C P++G WA
Sbjct: 161 CVPAIGEHWA 170
>sp|BP10_BPT4|BASEPLATE wedge protein gp10|Enterobacteria phage T4 (Bacteriophage T4)
Query: 2 CPSLGGSW 9
C LGG+W
Sbjct: 342 CSVLGGTW 349
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 CCPSLGGSWA 10
C P++G WA
Sbjct: 161 CVPAIGEHWA 170
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 CCPSLGGSWA 10
C P++G WA
Sbjct: 188 CVPAIGEHWA 197
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 CCPSLGGSWA 10
C P++G WA
Sbjct: 222 CAPAIGEHWA 231
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 1 CCPSLGGSWA 10
C P +G WA
Sbjct: 160 CAPPIGEHWA 169
>sp|YL796_MIMIV|UNCHARACTERIZED protein L796|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 PSLGGSW 9
PS+G SW
Sbjct: 136 PSIGSSW 142
>sp|VL1_CRPVK|MAJOR capsid protein L1|Cottontail rabbit papillomavirus (strain Kansas)
Query: 1 CCPSLGGSWA 10
C P+ G WA
Sbjct: 161 CVPATGEHWA 170
>sp|VL1_COPV6|MAJOR capsid protein L1|Canine oral papillomavirus (strain Y62)
Query: 1 CCPSLGGSWA 10
C P+LG W+
Sbjct: 164 CKPALGEHWS 173
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 1 CCPSLGGSWA 10
C P +G WA
Sbjct: 157 CTPPIGEHWA 166
>sp|3003L_ASFM2|PROTEIN MGF 300-3L|African swine fever virus (isolate
Query: 1 CCPSLGGS 8
CC +LGG+
Sbjct: 35 CCYTLGGT 42
>sp|3004L_ASFM2|PROTEIN MGF 300-4L|African swine fever virus (isolate
Query: 1 CCPSLGGS 8
CC +LGG+
Sbjct: 262 CCYTLGGT 269
>sp|3004L_ASFB7|PROTEIN MGF 300-4L|African swine fever virus (strain
Query: 1 CCPSLGGS 8
CC +LGG+
Sbjct: 259 CCYTLGGT 266
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 CCPSLGGSW 9
C P+LG W
Sbjct: 160 CAPALGEHW 168
>sp|MCP_ALHV1|MAJOR capsid protein|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 CCPSLGGSW 9
C P + GSW
Sbjct: 945 CDPLVAGSW 953
>sp|DEPOL_BPKN1|DEPOLYMERASE, capsule KN1-specific|Klebsiella phage KN1-1 (Bacteriophage KN1-1)
Query: 3 PSLGGSW 9
PS GSW
Sbjct: 749 PSFNGSW 755
>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)
Query: 3 PSLGGSW 9
P L GSW
Sbjct: 2945 PDLSGSW 2951
>sp|VG430_BPPF1|UNCHARACTERIZED protein ORF430|Pseudomonas phage Pf1 (Bacteriophage Pf1)
Query: 2 CPSLGGSW 9
CP L G W
Sbjct: 299 CPHLQGLW 306
>sp|UL33_MUHVS|G-PROTEIN coupled receptor homolog M33|Murid herpesvirus 1 (strain Smith)
Query: 1 CCPSLGGSWA 10
C PSLG S A
Sbjct: 23 CAPSLGLSIA 32
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 CCPSLGGSWA 10
C PS+G W+
Sbjct: 268 CKPSIGEHWS 277
>sp|HEMA_I49A1|HEMAGGLUTININ A virus (strain A/Duck/Germany/1949
Query: 1 CCPSLGGSW 9
C P L G+W
Sbjct: 83 CDPHLTGTW 91
>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)
Query: 1 CCPSLGGSW 9
C ++GG+W
Sbjct: 1996 CGVAIGGTW 2004
>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0
Query: 1 CCPSLGGSW 9
C ++GG+W
Sbjct: 1996 CGVAIGGTW 2004
>sp|BP08_BPT4|BASEPLATE wedge protein gp8|Enterobacteria phage T4 (Bacteriophage T4)
Query: 2 CPSLGGSW 9
C LGG W
Sbjct: 153 CLKLGGKW 160
>sp|TRM3_GAHVM|TRIPARTITE terminase subunit 3|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 CCPSLG 6
CC SLG
Sbjct: 69 CCDSLG 74
>sp|CEP2_ALHV1|CYTOPLASMIC envelopment protein 2|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 CCPSLG 6
CCPS+G
Sbjct: 184 CCPSIG 189
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 4 SLGGSWA 10
+ GGSWA
Sbjct: 142 TTGGSWA 148
93|Sequence|461|470|GGSWACCQLP
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 1 GGSWAC 6
GGSWAC
Sbjct: 144 GGSWAC 149
>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate
Query: 2 GSWACCQ 8
GSW CQ
Sbjct: 1511 GSWKACQ 1517
>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus
Query: 2 GSWACCQ 8
GSW CQ
Sbjct: 1511 GSWKACQ 1517
>sp|POLN_TYMVA|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate
Query: 2 GSWACCQ 8
GSW CQ
Sbjct: 1511 GSWKACQ 1517
>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)
Query: 1 GGSWACCQLP 10
GGSW LP
Sbjct: 405 GGSWPPIHLP 414
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 5 ACCQLP 10
ACC LP
Sbjct: 1208 ACCSLP 1213
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 5 ACCQLP 10
ACC LP
Sbjct: 1208 ACCSLP 1213
>sp|TEG1_GAHVM|TEGUMENT protein UL46 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 4 WACCQ 8
W CCQ
Sbjct: 287 WTCCQ 291
>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus
Query: 2 GSWACCQ 8
GSW CQ
Sbjct: 1437 GSWKACQ 1443
>sp|POLG_MRFVC|GENOME polyprotein|Maize rayado fino virus (isolate
Query: 2 GSWACCQ 8
GSW CQ
Sbjct: 1448 GSWKACQ 1454
>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 GGSWACCQ 8
GG+W C +
Sbjct: 872 GGNWTCVK 879
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 1 GGSWACCQ 8
GG+W C +
Sbjct: 872 GGNWTCVK 879
>sp|ORF3_TTVI1|UNCHARACTERIZED ORF3 protein|Torque teno sus virus 1
Query: 1 GGSWACCQLP 10
GGS AC LP
Sbjct: 72 GGSAACTSLP 81
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 GGSWACCQL 9
GGSW+ Q+
Sbjct: 104 GGSWSILQM 112
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 GGSWAC 6
GG+W C
Sbjct: 876 GGNWTC 881
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 1 GGSWAC 6
GG+W C
Sbjct: 876 GGNWTC 881
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 1 GGSWAC 6
GG+W C
Sbjct: 876 GGNWTC 881
>sp|PRIM_ELHVK|DNA primase|Elephantid herpesvirus 1 (isolate Asian
Query: 3 SWACCQL 9
SW C QL
Sbjct: 900 SWPCVQL 906
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGSWACCQ 8
GG W C Q
Sbjct: 414 GGCWKCGQ 421
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GSWACCQ 8
G++ CCQ
Sbjct: 68 GAYVCCQ 74
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 GSWACCQ 8
G++ CCQ
Sbjct: 68 GAYVCCQ 74
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 GGSWACCQLP 10
GGS+AC + P
Sbjct: 150 GGSYACKKGP 159
>sp|RIR1_MUHVS|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Murid herpesvirus 1 (strain
Query: 4 WACCQL 9
WA CQL
Sbjct: 764 WAVCQL 769
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 GGSWACCQLP 10
GGS+AC + P
Sbjct: 150 GGSYACKRGP 159
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 GGSWACCQLP 10
GGS+AC + P
Sbjct: 150 GGSYACKRGP 159
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 4 WACCQ 8
W CC+
Sbjct: 324 WVCCE 328
>sp|POLN_KYMVJ|NON-STRUCTURAL replication polyprotein|Kennedya yellow mosaic virus (strain
Query: 2 GSWACCQ 8
G+W CQ
Sbjct: 1541 GNWKACQ 1547
>sp|VE1_OVPVD|REPLICATION protein E1|Odocoileus virginianus papillomavirus 1 (DPV)
Query: 3 SWACCQ 8
SWACC
Sbjct: 91 SWACCH 96
>sp|VP5_IPNVJ|PROTEIN VP5|Infectious pancreatic necrosis virus (strain
Query: 4 WACCQLP 10
WA C LP
Sbjct: 68 WASCLLP 74
>sp|TEG7_EHV2|TEGUMENT protein UL51 homolog|Equine herpesvirus 2 (strain 86/87)
Query: 4 WACCQL 9
W CC L
Sbjct: 8 WTCCGL 13
>sp|TEG7_ALHV1|TEGUMENT protein UL51 homolog|Alcelaphine herpesvirus 1 (strain C500)
Query: 4 WACCQL 9
W CC L
Sbjct: 8 WTCCGL 13
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 GGSWAC 6
GGS+AC
Sbjct: 134 GGSYAC 139
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 GGSWAC 6
GGS+AC
Sbjct: 150 GGSYAC 155
94|Sequence|466|475|CCQLPHAVCC
>sp|VE2_BPV1|REGULATORY protein E2|Bovine papillomavirus type 1
Query: 2 CQLPHAVCC 10
C++PH+V C
Sbjct: 57 CRVPHSVVC 65
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CQLPHAVCC 10
C LP+ +CC
Sbjct: 460 CTLPYLLCC 468
>sp|PG064_VACCW|PROTEIN OPG064|Vaccinia virus (strain Western Reserve)
Query: 2 CQLPHAVCC 10
C LP+ +CC
Sbjct: 460 CTLPYLLCC 468
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CQLPHAVCC 10
C LP+ +CC
Sbjct: 460 CTLPYLLCC 468
>sp|VE2_BPV2|REGULATORY protein E2|Bos taurus papillomavirus 2 (Bovine
Query: 2 CQLPHAVCC 10
C++PH+V C
Sbjct: 57 CRVPHSVVC 65
>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)
Query: 2 CQLPHAVC 9
CQLPH C
Sbjct: 158 CQLPHTDC 165
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 CQLPHAVC 9
C+ PH VC
Sbjct: 156 CEYPHTVC 163
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 CQLPHAVC 9
C+ PH VC
Sbjct: 156 CEYPHTVC 163
>sp|FUS_SV41|FUSION glycoprotein F0|Simian virus 41 (SV41)
Query: 1 CCQLPHAVCC 10
C PHAV C
Sbjct: 331 CVVTPHAVFC 340
>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)
Query: 2 CQLPHAVC 9
C+ PH +C
Sbjct: 165 CEYPHTIC 172
>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)
Query: 2 CQLPHAVC 9
C+ PH +C
Sbjct: 165 CEYPHTIC 172
>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)
Query: 2 CQLPHAVC 9
C+ PH +C
Sbjct: 165 CEYPHTIC 172
>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)
Query: 2 CQLPHAVC 9
C+ PH +C
Sbjct: 165 CEYPHTIC 172
>sp|SPIKE_CVP67|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus
Query: 2 CQLPHAVC 9
C+ PH +C
Sbjct: 165 CEYPHTIC 172
>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)
Query: 2 CQLPHAVC 9
C+ PH +C
Sbjct: 165 CEYPHTIC 172
>sp|YR842_MIMIV|PUTATIVE BTB/POZ domain-containing protein R842|Acanthamoeba polyphaga
Query: 2 CQLPHAVCC 10
C+L + +CC
Sbjct: 98 CRLEYHICC 106
>sp|SPIKE_CVMJH|SPIKE glycoprotein|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 CQLPHAVC 9
CQLP+ C
Sbjct: 158 CQLPYTPC 165
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 CQLPHAVC 9
C+ PH +C
Sbjct: 156 CEYPHTIC 163
>sp|MCES_FOWPN|MRNA-CAPPING enzyme small subunit|Fowlpox virus (strain NVSL) (FPV)
Query: 2 CQLPHA 7
CQ PHA
Sbjct: 199 CQQPHA 204
>sp|YL13_ADE41|UNCHARACTERIZED 6.9 kDa protein in|Human adenovirus F serotype 41
Query: 1 CCQLPHAVC 9
CCQ P AVC
Sbjct: 45 CCQTPIAVC 53
>sp|CAPSD_AQRVA|INNER capsid protein VP3|Aquareovirus A (isolate Chum
Query: 2 CQLPHA 7
CQ PHA
Sbjct: 291 CQRPHA 296
>sp|5057R_ASFB7|PROTEIN MGF 505-7R|African swine fever virus (strain
Query: 2 CQLPHAVCC 10
C L HAV C
Sbjct: 134 CLLQHAVKC 142
>sp|5056R_ASFP4|PROTEIN MGF 505-6R|African swine fever virus (isolate
Query: 2 CQLPHAVCC 10
C L HAV C
Sbjct: 134 CLLQHAVKC 142
>sp|NSP1_ROTEL|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Equine/United
Query: 1 CCQLPHAVCC 10
CCQL V C
Sbjct: 45 CCQLTELVFC 54
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 4 LPHAVCC 10
LP+ +CC
Sbjct: 462 LPYLLCC 468
>sp|SPIKE_CVMA5|SPIKE glycoprotein|Murine coronavirus (strain A59) (MHV-A59)
Query: 2 CQLPHAVC 9
CQLP+ C
Sbjct: 158 CQLPYTDC 165
>sp|SPIKE_CVMJC|SPIKE glycoprotein|Murine coronavirus (strain JHMV /
Query: 2 CQLPHAVC 9
CQLP+ C
Sbjct: 158 CQLPYTPC 165
>sp|SPIKE_CVM4|SPIKE glycoprotein|Murine coronavirus (strain 4) (MHV-4)
Query: 2 CQLPHAVC 9
CQLP+ C
Sbjct: 158 CQLPYTPC 165
>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)
Query: 2 CQLPHAVCC 10
C L HA C
Sbjct: 509 CYLAHAALC 517
>sp|5057R_ASFK5|PROTEIN MGF 505-7R|African swine fever virus (isolate
Query: 2 CQLPHAVCC 10
C L HA+ C
Sbjct: 134 CLLQHAIKC 142
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 1 CCQLPHAVCC 10
C +LP CC
Sbjct: 62 CSRLPALECC 71
95|Sequence|471|480|HAVCCEDRQH
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 4 CCEDRQH 10
CC DR+H
Sbjct: 531 CCIDRKH 537
>sp|NS1_MUMIP|INITIATOR protein NS1|Murine minute virus (strain MVM
Query: 1 HAVCC 5
HA+CC
Sbjct: 379 HAICC 383
>sp|NS1_MUMIM|INITIATOR protein NS1|Murine minute virus (strain MVMi)
Query: 1 HAVCC 5
HA+CC
Sbjct: 379 HAICC 383
>sp|RDRP_OLV2I|RNA-DIRECTED RNA polymerase 2a|Olive latent virus 2 (isolate
Query: 1 HAVCCE 6
HA CCE
Sbjct: 65 HAECCE 70
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 4 CCEDRQH 10
CC DR+H
Sbjct: 535 CCIDRKH 541
>sp|NS1_PAVL3|INITIATOR protein NS1|Parvovirus LuIII
Query: 1 HAVCC 5
HA+CC
Sbjct: 379 HAICC 383
>sp|NS1_PAVHH|INITIATOR protein NS1|Hamster parvovirus H1
Query: 1 HAVCC 5
HA+CC
Sbjct: 379 HAICC 383
>sp|DNB2_ADEG1|DNA-BINDING protein|Fowl adenovirus A serotype 1
Query: 1 HAVCCEDRQH 10
+AVC +D++H
Sbjct: 241 NAVCYKDQEH 250
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 HAVCC 5
HA+CC
Sbjct: 403 HAICC 407
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 HAVCC 5
HA+CC
Sbjct: 403 HAICC 407
96|Sequence|476|485|EDRQHCCPAG
>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus
Query: 2 DRQHCCPAG 10
D +H CP G
Sbjct: 99 DSEHNCPQG 107
>sp|YL544_MIMIV|UNCHARACTERIZED protein L544|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 EDRQHCC 7
EDR+ CC
Sbjct: 354 EDRKLCC 360
>sp|DPOL_RCMVM|DNA polymerase catalytic subunit|Rat cytomegalovirus (strain
Query: 3 RQHCCPAG 10
RQH PAG
Sbjct: 115 RQHISPAG 122
>sp|VLF1_NPVOP|VERY late expression factor 1|Orgyia pseudotsugata multicapsid
Query: 2 DRQHCCP 8
DRQ C P
Sbjct: 34 DRQRCTP 40
>sp|VLF1_NPVHZ|VERY late expression factor 1|Heliothis zea nuclear polyhedrosis virus
Query: 2 DRQHCCP 8
DRQ C P
Sbjct: 36 DRQRCTP 42
>sp|VLF1_NPVAC|VERY late expression factor 1|Autographa californica nuclear
Query: 2 DRQHCCP 8
DRQ C P
Sbjct: 34 DRQRCTP 40
>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)
Query: 2 DRQHCCPAG 10
D+ H CP G
Sbjct: 1145 DKGHLCPEG 1153
>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)
Query: 3 RQHCCPA 9
R+HC P+
Sbjct: 102 REHCTPS 108
>sp|MCP_GAHVM|MAJOR capsid protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 5 HCCPAG 10
HC PAG
Sbjct: 5 HCPPAG 10
>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)
Query: 3 RQHCCPAG 10
R CCP G
Sbjct: 443 RLECCPGG 450
97|Sequence|481|490|CCPAGYTCNV
>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)
Query: 1 CCPAGY 6
CCP GY
Sbjct: 446 CCPGGY 451
>sp|NS4_BANNV|NON-STRUCTURAL protein 4|Banna virus (BAV)
Query: 1 CCPAGYTC 8
CCP + C
Sbjct: 10 CCPGRFVC 17
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAGY CN
Sbjct: 218 CAPAGYAILKCN 229
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAGY CN
Sbjct: 216 CAPAGYAILKCN 227
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAGY CN
Sbjct: 220 CAPAGYAILKCN 231
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 CPAGYTCNV 10
CP G C+V
Sbjct: 1176 CPEGTVCSV 1184
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 CPAGYTCNV 10
CP G C+V
Sbjct: 1177 CPEGTVCSV 1185
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAGY CN
Sbjct: 209 CAPAGYAILKCN 220
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGY 6
C PAGY
Sbjct: 215 CAPAGY 220
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAGY CN
Sbjct: 214 CAPAGYAIFKCN 225
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 CCPAGYTC 8
C PA TC
Sbjct: 93 CSPASSTC 100
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 2 CPAGYTCNV 10
C A Y CN+
Sbjct: 49 CIASYCCNL 57
>sp|HN_PI3B|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (BPIV-3)
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 2 CPAGYTCNV 10
C A Y CN+
Sbjct: 49 CIASYCCNL 57
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|ENV_SIVVT|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 1 CCPAGYT---CN 9
C PAGY CN
Sbjct: 231 CAPAGYALLKCN 242
>sp|ENV_SIVG1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.grivet
Query: 1 CCPAGY 6
C PAGY
Sbjct: 220 CAPAGY 225
>sp|ENV_SIVV1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 1 CCPAGY 6
C PAGY
Sbjct: 232 CAPAGY 237
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 2 CPAGYTC 8
CP G TC
Sbjct: 286 CPWGNTC 292
98|Sequence|486|495|YTCNVKARSC
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YTCNVKARSC 10
YTCNV R+C
Sbjct: 113 YTCNVTLRNC 122
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TCNVKARSC 10
TCN+K C
Sbjct: 590 TCNIKVTVC 598
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TCNVKARSC 10
TCN+K C
Sbjct: 590 TCNIKVTVC 598
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 YTCNVKARSC 10
Y+CN AR C
Sbjct: 1040 YSCNAGARVC 1049
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 YTCNVKARSC 10
Y+CN AR C
Sbjct: 1040 YSCNAGARVC 1049
>sp|POL_FIVT2|POL polyprotein|Feline immunodeficiency virus (isolate TM2)
Query: 2 TCNVKARSC 10
TC++ R+C
Sbjct: 519 TCDIALRAC 527
>sp|POL_FIVSD|POL polyprotein|Feline immunodeficiency virus (strain San
Query: 2 TCNVKARSC 10
TC++ R+C
Sbjct: 520 TCDIALRAC 528
>sp|POL_FIVPE|POL polyprotein|Feline immunodeficiency virus (isolate Petaluma)
Query: 2 TCNVKARSC 10
TC++ R+C
Sbjct: 520 TCDIALRAC 528
>sp|VP2_BTV10|OUTER capsid protein VP2|Bluetongue virus 10 (isolate USA)
Query: 1 YTCNVKARS 9
+ C VKARS
Sbjct: 133 FNCIVKARS 141
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TCNVKARSC 10
TCN++ C
Sbjct: 590 TCNIRVTVC 598
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 1 YTCNVKARSC 10
YTC+ + SC
Sbjct: 91 YTCSPASSSC 100
>sp|GP2A_PRRSS|GLYCOPROTEIN 2a|Porcine reproductive and respiratory syndrome
Query: 3 CNVKARSC 10
C VK+ SC
Sbjct: 6 CGVKSASC 13
>sp|GP2A_PRRSL|GLYCOPROTEIN 2a|Porcine reproductive and respiratory syndrome
Query: 3 CNVKARSC 10
C VK+ SC
Sbjct: 6 CGVKSASC 13
99|Sequence|491|500|KARSCEKEVV
>sp|Y030_NPVOP|UNCHARACTERIZED 52.7 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 KARSCEKEV 9
KAR+CE+ +
Sbjct: 388 KARTCERRI 396
>sp|VR2B_BPT4|PROTEIN rIIB|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 KARSCEKEVV 10
K R+C+ EVV
Sbjct: 295 KMRTCQYEVV 304
>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus
Query: 2 ARSCEKE 8
ARSCEK
Sbjct: 1233 ARSCEKH 1239
100|Sequence|496|505|EKEVVSAQPA
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 EKEVVSAQP 9
E+EV++A P
Sbjct: 1513 EREVITASP 1521
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 EKEVVSAQP 9
E+EV++A P
Sbjct: 1513 EREVITASP 1521
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 EKEVVSAQP 9
E+EV++A P
Sbjct: 1513 EREVITASP 1521
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 EKEVVSAQP 9
E+EV++A P
Sbjct: 1513 EREVITASP 1521
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 EKEVVSAQP 9
E+EV++A P
Sbjct: 1513 EREVITASP 1521
101|Sequence|501|510|SAQPATFLAR
>sp|ENV_WDSV|ENVELOPE glycoprotein|Walleye dermal sarcoma virus (WDSV)
Query: 1 SAQPATFLAR 10
++QPATFL +
Sbjct: 21 ASQPATFLEK 30
>sp|RDRP_AHNNV|RNA-DIRECTED RNA polymerase|Atlantic halibut nervous necrosis virus
Query: 2 AQPATFLAR 10
P TFLAR
Sbjct: 720 GSPVTFLAR 728
102|Sequence|506|515|TFLARSPHVG
>sp|MCP_EHV1B|MAJOR capsid protein|Equine herpesvirus 1 (strain Ab4p)
Query: 1 TFLARSPHVG 10
T L R+PH+G
Sbjct: 1340 TALLRTPHIG 1349
>sp|MCP_EHV1V|MAJOR capsid protein|Equine herpesvirus 1 (strain V592)
Query: 1 TFLARSPHVG 10
T L R+PH+G
Sbjct: 1340 TALLRTPHIG 1349
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 TFLARSPHV 9
TFL ++PH+
Sbjct: 231 TFLQKNPHL 239
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FLARSPHV 9
FL+ SPHV
Sbjct: 224 FLSTSPHV 231
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FLARSPHV 9
FL+ SPHV
Sbjct: 293 FLSTSPHV 300
103|Sequence|511|520|SPHVGVKDVE
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HVGVKDVE 10
H+GVKD E
Sbjct: 302 HIGVKDSE 309
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HVGVKDVE 10
H+GVKD E
Sbjct: 302 HIGVKDSE 309
>sp|P4A_FOWPN|MAJOR core protein 4a precursor|Fowlpox virus (strain NVSL) (FPV)
Query: 2 PHVGVKDV 9
PH+ VK++
Sbjct: 490 PHIAVKEI 497
>sp|VE7_HPV28|PROTEIN E7|Human papillomavirus 28
Query: 2 PHVGVKDVE 10
PH VKD+E
Sbjct: 4 PHPTVKDIE 12
>sp|VE7_HPV10|PROTEIN E7|Human papillomavirus type 10
Query: 2 PHVGVKDVE 10
PH VKD+E
Sbjct: 4 PHPTVKDIE 12
>sp|VE7_HPV94|PROTEIN E7|Human papillomavirus type 94
Query: 2 PHVGVKDVE 10
PH VKD+E
Sbjct: 4 PHPTVKDIE 12
104|Sequence|516|525|VKDVECGEGH
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VKDVECGE 8
+KD+ECG+
Sbjct: 293 IKDLECGD 300
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VKDVECGE 8
+KD+ECG+
Sbjct: 293 IKDLECGD 300
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 345 DCGEGH 350
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 345 DCGEGH 350
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 345 DCGEGH 350
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 346 DCGEGH 351
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 346 DCGEGH 351
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 346 DCGEGH 351
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 346 DCGEGH 351
>sp|YL035_MIMIV|PUTATIVE BTB/POZ domain-containing protein L35|Acanthamoeba polyphaga
Query: 1 VKDVECGEGH 10
+KD+EC H
Sbjct: 323 IKDIECDNRH 332
>sp|PKG3_ADEB3|PACKAGING protein 3|Bovine adenovirus B serotype 3
Query: 4 VECGEG 9
VECGEG
Sbjct: 39 VECGEG 44
>sp|V023_FOWPN|PUTATIVE ankyrin repeat protein FPV023|Fowlpox virus (strain NVSL) (FPV)
Query: 1 VKDVECGEGH 10
+K++EC E H
Sbjct: 376 IKNLECIESH 385
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 VKDVECGEG 9
V DV CG G
Sbjct: 37 VADVACGTG 45
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VKDVECGEG 9
V DV CG G
Sbjct: 37 VADVACGTG 45
>sp|VG46_ICHVA|PROBABLE major glycoprotein|Ictalurid herpesvirus 1 (strain Auburn)
Query: 4 VECGEGH 10
+ECGE H
Sbjct: 459 LECGEPH 465
>sp|E1BS_ADECR|E1B protein, small T-antigen|Canine adenovirus serotype 1 (strain
Query: 1 VKDVECGEGH 10
V + ECGE H
Sbjct: 149 VVEEECGEEH 158
>sp|E1BS_ADECC|E1B protein, small T-antigen|Canine adenovirus serotype 1 (strain
Query: 1 VKDVECGEGH 10
V + ECGE H
Sbjct: 149 VVEEECGEEH 158
>sp|YR584_MIMIV|UNCHARACTERIZED N-acetyltransferase R584|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 KDVECGEG 9
K+ EC EG
Sbjct: 245 KETECSEG 252
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 KDVECGEG 9
K+++CG+G
Sbjct: 799 KELKCGQG 806
>sp|VNS3_AHSV8|NON-STRUCTURAL protein NS3|African horse sickness virus 8
Query: 1 VKDVECGE 8
++DV+CG+
Sbjct: 211 LRDVKCGD 218
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 KDVECGEG 9
K+++CG+G
Sbjct: 774 KELKCGDG 781
>sp|VP7_RRSVT|MICROTUBULE-ASSOCIATED protein VP7|Rice ragged stunt virus (isolate
Query: 6 CGEGH 10
CG+GH
Sbjct: 257 CGDGH 261
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 DVECGEG 9
++ CGEG
Sbjct: 787 EIRCGEG 793
105|Sequence|521|530|CGEGHFCHDN
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 346 CGEGHSCH 353
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 346 CGEGHSCH 353
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 346 CGEGHSCH 353
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 347 CGEGHSCH 354
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 347 CGEGHSCH 354
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 347 CGEGHSCH 354
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 347 CGEGHSCH 354
>sp|VSR_RDVO|SUPPRESSOR of RNA-mediated gene silencing|Rice dwarf virus (isolate O)
Query: 4 GHFCHDN 10
G FCHDN
Sbjct: 250 GMFCHDN 256
>sp|VSR_RDVA|SUPPRESSOR of RNA-mediated gene silencing|Rice dwarf virus (isolate Akita)
Query: 4 GHFCHDN 10
G FCHDN
Sbjct: 250 GMFCHDN 256
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 CGEGHFCH 8
CG GH CH
Sbjct: 355 CGAGHSCH 362
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 CGEGHFCH 8
CG+G+FC+
Sbjct: 356 CGDGYFCY 363
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 CGEGHFCH 8
CG GH CH
Sbjct: 355 CGAGHSCH 362
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 CGEGHFCH 8
CG+G+FC+
Sbjct: 356 CGDGYFCY 363
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 CGEGHFCH 8
CG+G FC+
Sbjct: 354 CGDGQFCY 361
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 1 CGEGHFCH 8
CG+G+FC+
Sbjct: 22 CGDGYFCY 29
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 CGEGHFCH 8
CG+G FC+
Sbjct: 354 CGDGQFCY 361
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 CGEGHFCH 8
CG GH CH
Sbjct: 346 CGMGHSCH 353
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 CGEGHFCHDN 10
CG+G F H++
Sbjct: 808 CGQGIFIHND 817
>sp|POLS_MIDDV|STRUCTURAL polyprotein|Middelburg virus
Query: 1 CGEGHFCH 8
CG G FC+
Sbjct: 359 CGNGQFCY 366
>sp|052L_FRG3G|UNCHARACTERIZED protein 052L|Frog virus 3 (isolate Goorha)
Query: 2 GEGHFCHDN 10
GE FC+D+
Sbjct: 247 GEAFFCYDD 255
>sp|YR602_MIMIV|PUTATIVE ankyrin repeat protein R602|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CGEGHFCHDN 10
CG FC DN
Sbjct: 170 CGVDPFCFDN 179
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 737 CGSGIFVHND 746
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 806 CGSGVFIHND 815
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2610 CGRGGWCY 2617
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 802 CGSGVFIHND 811
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2607 CGRGGWCY 2614
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 806 CGSGVFIHND 815
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2610 CGRGGWCY 2617
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 801 CGSGIFIHND 810
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 808 CGSGIFIHND 817
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 801 CGSGIFIHND 810
>sp|YL285_MIMIV|UNCHARACTERIZED protein L285|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CGEGHF 6
CG GHF
Sbjct: 27 CGRGHF 32
>sp|VSR_PCV87|SUPPRESSOR of RNA silencing|Peanut clump virus (isolate 87/TGTA2)
Query: 1 CGEGHF 6
CGE HF
Sbjct: 64 CGEKHF 69
>sp|RDRP_BBV|RNA-DIRECTED RNA polymerase|Black beetle virus (BBV)
Query: 3 EGHFCHD 9
EGH C D
Sbjct: 773 EGHLCTD 779
>sp|TRM1_GAHVM|TRIPARTITE terminase subunit 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 CGEGHFC 7
CGE H C
Sbjct: 703 CGELHIC 709
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 CGEGHFCHD 9
CGE F H+
Sbjct: 93 CGENTFSHN 101
>sp|YL247_MIMIV|UNCHARACTERIZED HNH endonuclease L247|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 EGHFCHD 9
E HF HD
Sbjct: 289 ESHFSHD 295
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|YL437_MIMIV|UNCHARACTERIZED protein L437|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CGEGHFC 7
C EGH C
Sbjct: 198 CTEGHKC 204
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)
Query: 1 CGEGHFCHDN 10
CG+ H C DN
Sbjct: 1557 CGKSHVC-DN 1565
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|RDRP_SCPMV|REPLICASE polyprotein P2AB|Southern cowpea mosaic virus (SCPMV)
Query: 2 GEGHFCHD 9
G GH C D
Sbjct: 810 GLGHLCKD 817
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 CGEGHFCHDN 10
CG CH N
Sbjct: 1785 CGSALICHVN 1794
>sp|YR831_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R831|Acanthamoeba polyphaga
Query: 2 GEGHFC 7
GEG FC
Sbjct: 1161 GEGSFC 1166
>sp|YR826_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R826|Acanthamoeba polyphaga
Query: 2 GEGHFC 7
GEG FC
Sbjct: 1186 GEGSFC 1191
>sp|YR818_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R818|Acanthamoeba polyphaga
Query: 2 GEGHFC 7
GEG FC
Sbjct: 1187 GEGSFC 1192
>sp|SH_TUPVT|SMALL hydrophobic protein|Tupaia virus (isolate Tupaia/Thailand/-/1986)
Query: 5 HFCHD 9
+FCHD
Sbjct: 61 YFCHD 65
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 GHFCHD 9
GHF HD
Sbjct: 30 GHFPHD 35
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 GEGHFC 7
GEG FC
Sbjct: 754 GEGDFC 759
>sp|VF019_IIV3|PUTATIVE MSV199 domain-containing protein 093L|Invertebrate iridescent virus
Query: 4 GHFCHDN 10
GH C DN
Sbjct: 178 GHQCRDN 184
>sp|UL97_MUHVS|SERINE/THREONINE protein kinase M97|Murid herpesvirus 1 (strain Smith)
Query: 1 CGEGHF 6
CG GHF
Sbjct: 385 CGVGHF 390
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 2 GEGHFCHD 9
EGHF +D
Sbjct: 462 AEGHFLND 469
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 2 GEGHFCHDN 10
G+ H CH N
Sbjct: 63 GDVHVCHIN 71
>sp|RPC1_BPD3|REPRESSOR protein CI|Pseudomonas phage D3 (Bacteriophage D3)
Query: 1 CGEGHF 6
CG+G+F
Sbjct: 95 CGDGYF 100
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 1 CGEGHFC 7
CGE H C
Sbjct: 49 CGEYHVC 55
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 1 CGEGHFC 7
CGE H C
Sbjct: 49 CGEYHVC 55
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2589 CGRGGWCY 2596
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2588 CGRGGWCY 2595
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2589 CGRGGWCY 2596
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2588 CGRGGWCY 2595
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2588 CGRGGWCY 2595
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2589 CGRGGWCY 2596
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2588 CGRGGWCY 2595
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2588 CGRGGWCY 2595
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2588 CGRGGWCY 2595
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2589 CGRGGWCY 2596
>sp|VP7_RRSVT|MICROTUBULE-ASSOCIATED protein VP7|Rice ragged stunt virus (isolate
Query: 1 CGEGH 5
CG+GH
Sbjct: 257 CGDGH 261
>sp|DPO24_BPK64|DEPOLYMERASE, capsule K1-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)
Query: 2 GEGHFCHDN 10
G G+F +DN
Sbjct: 290 GAGYFYYDN 298
106|Sequence|526|535|FCHDNQTCCR
>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 CHDNQTCCR 10
CH +TC R
Sbjct: 29 CHSEKTCAR 37
>sp|YR468_MIMIV|UNCHARACTERIZED protein R468|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 CHDNQTCC 9
C +NQ CC
Sbjct: 211 CKENQACC 218
>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)
Query: 3 HDNQTC 8
HD QTC
Sbjct: 693 HDTQTC 698
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 CHDNQTCC 9
C D + CC
Sbjct: 319 CRDQELCC 326
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 CHDNQTCC 9
C D + CC
Sbjct: 319 CRDQELCC 326
>sp|POLG_PVYO|GENOME polyprotein|Potato virus Y (strain O)
Query: 3 HDNQTC 8
HD QTC
Sbjct: 693 HDTQTC 698
>sp|MVP_PVYN|P3N-PIPO polyprotein|Potato virus Y (strain N)
Query: 3 HDNQTC 8
HD QTC
Sbjct: 693 HDTQTC 698
>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)
Query: 2 CHDNQTCCR 10
CHD CR
Sbjct: 179 CHDTFQTCR 187
>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh
Query: 2 CHDNQTCCR 10
CHD CR
Sbjct: 179 CHDTFQTCR 187
>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh
Query: 2 CHDNQTCCR 10
CHD CR
Sbjct: 179 CHDTFQTCR 187
>sp|GT041_SIFVH|PUTATIVE glycosyltransferase 41|Sulfolobus islandicus filamentous virus
Query: 1 FCHDNQTCCR 10
+C DN+ C R
Sbjct: 270 YCVDNKHCFR 279
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FCHDNQTC 8
FC+ N TC
Sbjct: 278 FCNQNYTC 285
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 5 NQTCCR 10
N+TCCR
Sbjct: 188 NKTCCR 193
>sp|POLG_PVYC|GENOME polyprotein|Potato virus Y (strain C)
Query: 3 HDNQTC 8
HD QTC
Sbjct: 693 HDTQTC 698
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FCHDNQTC 8
FC+ N TC
Sbjct: 278 FCNQNYTC 285
>sp|KR16_ICHVA|PROTEIN kinase ORF16|Ictalurid herpesvirus 1 (strain Auburn)
Query: 3 HDNQTCCR 10
HD +T CR
Sbjct: 281 HDEETPCR 288
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 NQTCCR 10
N TCCR
Sbjct: 290 NDTCCR 295
>sp|53DR_MIMIV|PUTATIVE 5'(3')-deoxyribonucleotidase R824|Acanthamoeba polyphaga mimivirus
Query: 5 NQTCC 9
NQTCC
Sbjct: 109 NQTCC 113
>sp|38K_NPVAC|UNCHARACTERIZED 38.0 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 1 FCHDNQTC 8
FC+D Q C
Sbjct: 50 FCNDPQLC 57
>sp|RIR2_EHV4|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Equine herpesvirus 4 (strain 1942)
Query: 3 HDNQTCC 9
H N +CC
Sbjct: 207 HTNASCC 213
>sp|SPAN1_BPMU|SPANIN, inner membrane subunit|Escherichia phage Mu (Bacteriophage Mu)
Query: 3 HDNQTCCR 10
HDNQT R
Sbjct: 31 HDNQTLRR 38
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 HDNQTC 8
HD++TC
Sbjct: 136 HDDETC 141
>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)
Query: 3 HDNQTC 8
HD++TC
Sbjct: 136 HDDETC 141
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 5 NQTCCR 10
N+TCC+
Sbjct: 190 NKTCCK 195
>sp|SPHR_AMEPV|SPHEROIDIN moorei entomopoxvirus (AmEPV)
Query: 2 CHDNQTCCR 10
C DN TC R
Sbjct: 919 CGDNATCGR 927
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 4 DNQTCC 9
+N+TCC
Sbjct: 196 NNKTCC 201
>sp|SPIKE_WBV24|SPIKE glycoprotein|White bream virus (isolate Blicca
Query: 1 FCHDNQTCC 9
FC + +CC
Sbjct: 319 FCPASMSCC 327
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 HDNQTCC 9
HD+ CC
Sbjct: 2416 HDSVVCC 2422
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 5 NQTCCR 10
N+TCC+
Sbjct: 191 NKTCCK 196
107|Sequence|531|540|QTCCRDNRQG
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 QTCCRD 6
+TCCRD
Sbjct: 193 KTCCRD 198
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 QTCCRD 6
+TCCRD
Sbjct: 186 KTCCRD 191
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 1 QTCCRD 6
+TCCRD
Sbjct: 193 KTCCRD 198
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 QTCCRD 6
+TCCRD
Sbjct: 189 KTCCRD 194
>sp|YL581_MIMIV|UNCHARACTERIZED protein L581|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 QTCCRDNR 8
+ CC DNR
Sbjct: 681 KECCIDNR 688
>sp|NS1_MUMIP|INITIATOR protein NS1|Murine minute virus (strain MVM
Query: 3 CCRDNRQG 10
CC NRQG
Sbjct: 382 CCVLNRQG 389
>sp|NS1_MUMIM|INITIATOR protein NS1|Murine minute virus (strain MVMi)
Query: 3 CCRDNRQG 10
CC NRQG
Sbjct: 382 CCVLNRQG 389
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 QTCCRD 6
+TCC+D
Sbjct: 190 KTCCKD 195
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 QTCCRD 6
+TCC+D
Sbjct: 190 KTCCKD 195
>sp|NS1_PAVHH|INITIATOR protein NS1|Hamster parvovirus H1
Query: 3 CCRDNRQG 10
CC NRQG
Sbjct: 382 CCVLNRQG 389
>sp|NS1_PAVL3|INITIATOR protein NS1|Parvovirus LuIII
Query: 3 CCRDNRQG 10
CC NRQG
Sbjct: 382 CCVLNRQG 389
>sp|53DR_MIMIV|PUTATIVE 5'(3')-deoxyribonucleotidase R824|Acanthamoeba polyphaga mimivirus
Query: 1 QTCCRD 6
QTCC D
Sbjct: 110 QTCCID 115
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 QTCCRD 6
+TCC+D
Sbjct: 192 KTCCKD 197
>sp|VNS5_MSTV|NON-STRUCTURAL protein NS5|Maize stripe virus (MStV)
Query: 1 QTCCRDNRQ 9
+TCCR++++
Sbjct: 54 ETCCRNHKR 62
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 3 CCRDNR 8
CC +NR
Sbjct: 247 CCNENR 252
108|Sequence|536|545|DNRQGWACCP
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 4 QGWACC 9
+GW CC
Sbjct: 322 EGWVCC 327
>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)
Query: 4 QGWACCP 10
QGW C P
Sbjct: 686 QGWVCSP 692
>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)
Query: 4 QGWACCP 10
QGW C P
Sbjct: 726 QGWVCSP 732
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 2 NRQGWACCP 10
N +GW C P
Sbjct: 296 NSRGWVCHP 304
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 2 NRQGWACCP 10
N +GW C P
Sbjct: 296 NSRGWVCHP 304
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 2 NRQGWACCP 10
N +GW C P
Sbjct: 296 NSRGWVCHP 304
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 2 NRQGWACCP 10
N +GW C P
Sbjct: 296 NSRGWVCHP 304
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 2 NRQGWACCP 10
N +GW C P
Sbjct: 296 NSRGWVCHP 304
>sp|VG50_BPML5|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate
Query: 1 DNRQGWA 7
D+R+GWA
Sbjct: 172 DSREGWA 178
>sp|TSP_BPSK2|MAJOR tail sheath protein|Serratia phage KSP20 (Serratia marcescens
Query: 1 DNRQGW 6
DN QGW
Sbjct: 217 DNEQGW 222
>sp|CAPSD_BPPHK|CAPSID protein F|Enterobacteria phage phiK (Bacteriophage phi-K)
Query: 1 DNRQGWACC 9
D+R G+ CC
Sbjct: 156 DSRYGFRCC 164
>sp|VG50_BPMD2|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate
Query: 1 DNRQGWA 7
D+R+GWA
Sbjct: 173 DSREGWA 179
>sp|VG50_BPMB2|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate
Query: 1 DNRQGWA 7
D+R+GWA
Sbjct: 168 DSREGWA 174
>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain
Query: 1 DNRQGWACCP 10
D R+ CCP
Sbjct: 130 DGRKVHCCCP 139
>sp|M2_I85A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWGC 17
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NRQGWACC 9
+R+G+ CC
Sbjct: 308 HREGFLCC 315
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 DNRQGWAC 8
D R+GW C
Sbjct: 253 DRRRGWPC 260
>sp|QIN_AVIS3|TRANSFORMING protein Qin|Avian sarcoma virus (strain 31)
Query: 1 DNRQGW 6
+N+QGW
Sbjct: 182 ENKQGW 187
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NRQGWACC 9
+R+G+ CC
Sbjct: 308 HREGFLCC 315
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NRQGWACC 9
+R+G+ CC
Sbjct: 308 HREGFLCC 315
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NRQGWACC 9
+R+G+ CC
Sbjct: 308 HREGFLCC 315
>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)
Query: 2 NRQGWACC 9
+R+G+ CC
Sbjct: 308 HREGFLCC 315
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 3 RQGWACCP 10
+ GW+C P
Sbjct: 295 KGGWSCHP 302
>sp|A40_VAR67|PROTEIN A40 homolog|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 NRQGWACC 9
N G+ACC
Sbjct: 9 NYAGYACC 16
>sp|POL_EIAVY|POL polyprotein|Equine infectious anemia virus (strain
Query: 1 DNRQGWACCP 10
D R W C P
Sbjct: 326 DKRYVWKCLP 335
>sp|VE1_OVPVD|REPLICATION protein E1|Odocoileus virginianus papillomavirus 1 (DPV)
Query: 4 QGWACC 9
+ WACC
Sbjct: 90 KSWACC 95
>sp|Y017_HVAVE|UNCHARACTERIZED protein ORF17|Heliothis virescens ascovirus 3e (HvAV-3e)
Query: 2 NRQGWACCP 10
N WAC P
Sbjct: 177 NYAEWACSP 185
>sp|M2_I97A1|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWGC 17
>sp|M2_I97A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWGC 17
>sp|POL_EIAVC|POL polyprotein|Equine infectious anemia virus (isolate
Query: 1 DNRQGWACCP 10
D R W C P
Sbjct: 326 DKRYVWNCLP 335
>sp|POL_EIAV9|POL polyprotein|Equine infectious anemia virus (isolate
Query: 1 DNRQGWACCP 10
D R W C P
Sbjct: 326 DKRYVWNCLP 335
>sp|NP_ADE40|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus F serotype 40
Query: 1 DNRQGWACC 9
DN GW C
Sbjct: 8 DNNTGWGLC 16
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 1 DNRQGWACCP 10
DN Q + C P
Sbjct: 630 DNSQAFRCVP 639
>sp|DNMT_FRG3G|PROBABLE DNA (cytosine-5)-methyltransferase|Frog virus 3 (isolate Goorha)
Query: 3 RQGWAC 8
R+GW+C
Sbjct: 20 REGWSC 25
>sp|PB1F2_I78AC|PROTEIN PB1-F2|Influenza A virus (strain A/Turkey/Minnesota/501/1978
Query: 2 NRQGW 6
NRQGW
Sbjct: 84 NRQGW 88
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 DNRQGWACCP 10
DN Q + C P
Sbjct: 627 DNSQAFRCVP 636
109|Sequence|541|550|WACCPYRQGV
>sp|CAPSD_NODAM|CAPSID protein alpha|Nodamura virus (strain Mag115) (NoV)
Query: 1 WACCPYR 7
WAC YR
Sbjct: 308 WACVEYR 314
>sp|VP3_NCMV|PROTEIN 3|Northern cereal mosaic virus (NCMV)
Query: 1 WACCPYRQG 9
++CCP +G
Sbjct: 99 FSCCPLEEG 107
>sp|CAPSD_BOOLV|CAPSID protein alpha|Boolarra virus (BoV)
Query: 1 WACCPYR 7
WAC YR
Sbjct: 312 WACIEYR 318
>sp|CAPSD_BBV|CAPSID protein alpha|Black beetle virus (BBV)
Query: 1 WACCPYR 7
WAC YR
Sbjct: 316 WACLEYR 322
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 ACCPYR 7
CCPY+
Sbjct: 446 GCCPYK 451
>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3
Query: 2 ACCPYR 7
CCPY+
Sbjct: 481 GCCPYK 486
>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain
Query: 2 ACCPYR 7
CCPY+
Sbjct: 469 GCCPYQ 474
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 ACCPYR 7
CCPY+
Sbjct: 512 GCCPYK 517
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 ACCPYR 7
CCPY+
Sbjct: 385 GCCPYK 390
>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)
Query: 3 CCPY 6
CCPY
Sbjct: 1535 CCPY 1538
>sp|DPOL_ADECT|DNA polymerase|Canine adenovirus serotype 2 (strain
Query: 2 ACCPYR 7
CCPY+
Sbjct: 470 GCCPYQ 475
>sp|RDRP_TNVA|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain A)
Query: 1 WACCPYRQ 8
W C P+R+
Sbjct: 21 WLCNPWRR 28
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 WACCPYRQGV 10
WA P RQ +
Sbjct: 63 WATVPVRQAI 72
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 WACCPYRQGV 10
WA P RQ +
Sbjct: 63 WATVPVRQAI 72
>sp|CAPSD_FHV|CAPSID protein alpha|Flock house virus (FHV)
Query: 1 WACCPYR 7
W+C YR
Sbjct: 316 WSCIEYR 322
>sp|ENV_FIVU2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UK2)
Query: 4 CPYRQGV 10
CP RQG+
Sbjct: 562 CPKRQGI 568
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 CCPY 6
CCPY
Sbjct: 918 CCPY 921
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WACCPYRQG 9
WAC R+G
Sbjct: 377 WACANPRRG 385
>sp|GP_SBVBH|ENVELOPMENT polyprotein|Bovine Schmallenberg virus (isolate
Query: 1 WACCPYRQGV 10
W C Y++G+
Sbjct: 1334 WLCRVYKEGI 1343
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WACCPYRQG 9
WAC R+G
Sbjct: 377 WACANPRRG 385
110|Sequence|546|555|YRQGVCCADR
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 YRQGVCCA 8
YRQG CCA
Sbjct: 434 YRQG-CCA 440
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 YRQGVC 6
YRQG C
Sbjct: 435 YRQGAC 440
>sp|REP_BPI22|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage I2-2 (Bacteriophage I2-2)
Query: 1 YRQGVCCAD 9
++QG+C D
Sbjct: 272 WKQGICVTD 280
>sp|PRO_SRV1|GAG-PRO polyprotein|Simian retrovirus SRV-1
Query: 3 QGVCCADR 10
+G CCA R
Sbjct: 282 KGKCCASR 289
>sp|PRO_MPMV|GAG-PRO polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian
Query: 3 QGVCCADR 10
+G CCA R
Sbjct: 281 KGKCCASR 288
>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1
Query: 3 QGVCCADR 10
+G CCA R
Sbjct: 282 KGKCCASR 289
>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian
Query: 3 QGVCCADR 10
+G CCA R
Sbjct: 281 KGKCCASR 288
>sp|GAG_SRV1|GAG polyprotein|Simian retrovirus SRV-1
Query: 3 QGVCCADR 10
+G CCA R
Sbjct: 282 KGKCCASR 289
>sp|GAG_MPMV|GAG polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian
Query: 3 QGVCCADR 10
+G CCA R
Sbjct: 281 KGKCCASR 288
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3226 YREAACC 3232
>sp|POL2_GFLVN|RNA2 polyprotein|Grapevine fanleaf virus (isolate NW)
Query: 5 VCCAD 9
VCCAD
Sbjct: 256 VCCAD 260
>sp|POL2_GFLV|RNA2 polyprotein|Grapevine fanleaf virus (GFLV)
Query: 5 VCCAD 9
VCCAD
Sbjct: 255 VCCAD 259
>sp|POL2_ARMVS|RNA2 polyprotein|Arabis mosaic virus (isolate Syrah)
Query: 5 VCCAD 9
VCCAD
Sbjct: 278 VCCAD 282
>sp|POL2_ARMVN|RNA2 polyprotein|Arabis mosaic virus (isolate NW)
Query: 5 VCCAD 9
VCCAD
Sbjct: 257 VCCAD 261
>sp|RNH_BPT4|RIBONUCLEASE H|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 YRQGVCCAD 9
Y++G+C D
Sbjct: 11 YKEGICLID 19
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3203 YREAACC 3209
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3201 YREAACC 3207
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3197 YREAACC 3203
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3226 YREAACC 3232
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3209 YREAACC 3215
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3203 YREAACC 3209
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3201 YREAACC 3207
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3197 YREAACC 3203
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3209 YREAACC 3215
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 RQGVCCAD 9
R+GVC D
Sbjct: 212 REGVCITD 219
111|Sequence|551|560|CCADRRHCCP
>sp|YL264_MIMIV|UNCHARACTERIZED WD repeat-containing protein L264|Acanthamoeba polyphaga mimivirus
Query: 1 CCADRRHCC 9
CCA++ CC
Sbjct: 421 CCANKNSCC 429
>sp|RDRP_BOTVF|RNA replication protein|Botrytis virus F (isolate Botrytis
Query: 3 ADRRHCCP 10
ADRR C P
Sbjct: 1876 ADRRRCNP 1883
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 CCADRRH 7
CC DR+H
Sbjct: 531 CCIDRKH 537
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 CCADRRH 7
CC DR+H
Sbjct: 535 CCIDRKH 541
>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)
Query: 4 DRRHCC 9
DRRH C
Sbjct: 912 DRRHAC 917
>sp|CAPSP_ADES1|PENTON protein|Snake adenovirus serotype 1 (SnAdV-1)
Query: 4 DRRHCCP 10
DRR CP
Sbjct: 424 DRRRACP 430
>sp|GT041_SIFVH|PUTATIVE glycosyltransferase 41|Sulfolobus islandicus filamentous virus
Query: 2 CADRRHC 8
C D +HC
Sbjct: 271 CVDNKHC 277
>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)
Query: 3 ADRRHCCP 10
A R HC P
Sbjct: 100 ASREHCTP 107
>sp|DNBI_BHV2B|MAJOR DNA-binding protein|Bovine herpesvirus 2 (strain BMV)
Query: 1 CCADRRHCC 9
C D RH C
Sbjct: 498 CSLDNRHSC 506
>sp|VG03_EHV1V|GENE 3 protein|Equine herpesvirus 1 (strain V592)
Query: 1 CCADRRHCCP 10
CC+ RR+ P
Sbjct: 4 CCSSRRNRSP 13
>sp|VG03_EHV1K|GENE 3 protein|Equine herpesvirus 1 (strain Kentucky
Query: 1 CCADRRHCCP 10
CC+ RR+ P
Sbjct: 4 CCSSRRNRSP 13
>sp|VG03_EHV1B|GENE 3 protein|Equine herpesvirus 1 (strain Ab4p)
Query: 1 CCADRRHCCP 10
CC+ RR+ P
Sbjct: 4 CCSSRRNRSP 13
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 6 RHCC 9
RHCC
Sbjct: 620 RHCC 623
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 6 RHCC 9
RHCC
Sbjct: 620 RHCC 623
>sp|PG129_VACCW|MAJOR core protein OPG129|Vaccinia virus (strain Western Reserve)
Query: 6 RHCC 9
RHCC
Sbjct: 619 RHCC 622
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 RHCC 9
RHCC
Sbjct: 620 RHCC 623
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 6 RHCC 9
RHCC
Sbjct: 620 RHCC 623
>sp|NS1A_ANV1|NON-STRUCTURAL polyprotein 1A|Avian nephritis virus 1 (ANV-1)
Query: 1 CCADRRHCC 9
CCA CC
Sbjct: 328 CCALVAKCC 336
>sp|NS1AB_ANV1|NON-STRUCTURAL polyprotein 1AB|Avian nephritis virus 1 (ANV-1)
Query: 1 CCADRRHCC 9
CCA CC
Sbjct: 328 CCALVAKCC 336
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 CADRRHCCP 10
C DR + CP
Sbjct: 1984 CLDRANFCP 1992
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2048 CCLDTASFCP 2057
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2034 CCLDTASFCP 2043
>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2046 CCLDTASFCP 2055
>sp|US02_BHV1S|PROTEIN US2 homolog|Bovine herpesvirus 1.2 (strain ST)
Query: 1 CCADRRHCCP 10
CADRR P
Sbjct: 6 TCADRRGAFP 15
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2042 CCLDTASFCP 2051
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2042 CCLDTASFCP 2051
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 1 CCADRRHC 8
CC ++HC
Sbjct: 174 CCLYKQHC 181
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2043 CCLDTATFCP 2052
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2023 CCLDTATFCP 2032
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2020 CCLDTATFCP 2029
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2016 CCLDTATFCP 2025
>sp|GLYCO_HIRRV|GLYCOPROTEIN rhabdovirus (strain Korea/CA 9703/1997)
Query: 1 CCADRRHCCP 10
CC +RR P
Sbjct: 484 CCMNRRPSMP 493
>sp|POLS_AURAV|STRUCTURAL polyprotein|Aura virus (AURAV)
Query: 1 CCADRRHC 8
CC RR C
Sbjct: 718 CCKARRDC 725
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 CADRRHCC 9
C++R CC
Sbjct: 452 CSERLACC 459
112|Sequence|556|565|RHCCPAGFRC
>sp|ENV_SIVTN|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate TAN1)
Query: 1 RHCCPAGF 8
R+C PAGF
Sbjct: 213 RYCAPAGF 220
>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)
Query: 3 CCPAGFR 9
CCPA F+
Sbjct: 1357 CCPANFK 1363
>sp|ENV_SIVVG|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 1 RHCCPAGF 8
R+C PAGF
Sbjct: 235 RYCAPAGF 242
>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum
Query: 4 CPAGFRC 10
CP FRC
Sbjct: 426 CPVSFRC 432
>sp|NS4_BANNV|NON-STRUCTURAL protein 4|Banna virus (BAV)
Query: 2 HCCPAGFRC 10
+CCP F C
Sbjct: 9 NCCPGRFVC 17
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 224 RYCAPPGFALLRC 236
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 225 RYCAPPGFFLLRC 237
>sp|ENV_SIVVT|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 1 RHCCPAGF 8
R+C PAG+
Sbjct: 229 RYCAPAGY 236
>sp|ENV_SIVG1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.grivet
Query: 1 RHCCPAGF 8
R+C PAG+
Sbjct: 218 RYCAPAGY 225
>sp|ENV_SIVV1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet
Query: 1 RHCCPAGF 8
R+C PAG+
Sbjct: 230 RYCAPAGY 237
>sp|ENV_SIVMB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate MB66)
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 241 YCAPAGF 247
>sp|ENV_SIVCZ|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate CPZ
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 215 YCAPAGF 221
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 218 YCAPAGF 224
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 229 YCAPAGF 235
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 219 YCAPAGF 225
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 218 YCAPAGF 224
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 213 YCAPAGF 219
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 220 YCAPAGF 226
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 213 YCAPAGF 219
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 218 YCAPAGF 224
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 211 YCAPAGF 217
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 215 YCAPAGF 221
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 222 YCAPAGF 228
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 215 YCAPAGF 221
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 222 YCAPAGF 228
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 218 YCAPAGF 224
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 215 YCAPAGF 221
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 229 YCAPAGF 235
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 218 YCAPAGF 224
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 222 YCAPAGF 228
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 215 YCAPAGF 221
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 225 YCAPAGF 231
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 219 YCAPAGF 225
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 210 YCAPAGF 216
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 215 RYCAPPGFALLRC 227
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 216 RYCAPPGFVLLRC 228
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 214 YCAPAGF 220
>sp|ENLYS_BPM10|PSEUDOMUREIN endoisopeptidase PeiW|Methanothermobacter phage psiM100
Query: 3 CCPAGFR 9
CC AGF+
Sbjct: 265 CCTAGFQ 271
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 4 CPAGFRC 10
CPA RC
Sbjct: 1991 CPAKLRC 1997
>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain
Query: 4 CPAGFRC 10
CP G RC
Sbjct: 1698 CPEGARC 1704
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 4 CPAGFRC 10
CP G RC
Sbjct: 1698 CPEGARC 1704
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 219 RYCAPPGFALLRC 231
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 224 RYCAPPGFAILRC 236
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 219 YCVPAGF 225
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 230 YCTPAGF 236
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 222 YCTPAGF 228
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 224 YCTPAGF 230
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 220 YCTPAGF 226
>sp|RDRP_PLRVW|PROTEIN P1-P2|Potato leafroll virus (strain
Query: 4 CPAGFR 9
CP GFR
Sbjct: 584 CPPGFR 589
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 225 RYCAPPGFALLRC 237
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 214 RYCAPPGFALLRC 226
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 4 CPAGFRC 10
CPA RC
Sbjct: 703 CPAKLRC 709
>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain
Query: 4 CPAGFR 9
CP GFR
Sbjct: 584 CPPGFR 589
>sp|FUS_NPVCF|MAJOR envelope glycoprotein|Choristoneura fumiferana nuclear polyhedrosis
Query: 1 RHCCPAGFRC 10
RH C +RC
Sbjct: 152 RHTCNRSWRC 161
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 4 CPAGFRC 10
CPA RC
Sbjct: 2021 CPAKLRC 2027
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 4 CPAGFRC 10
CPA RC
Sbjct: 2021 CPAKLRC 2027
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 4 CPAGFRC 10
CPA RC
Sbjct: 2034 CPAKLRC 2040
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 219 RYCAPPGFALLRC 231
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 CPAGFRC 10
CPA RC
Sbjct: 1983 CPAKLRC 1989
>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 4 CPAGFRC 10
CP G RC
Sbjct: 1698 CPDGARC 1704
>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate
Query: 4 CPAGFRC 10
CP G RC
Sbjct: 1788 CPDGARC 1794
>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain
Query: 4 CPAGFRC 10
CP G RC
Sbjct: 1707 CPDGARC 1713
>sp|VG56_ICHVA|UNCHARACTERIZED protein ORF56|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 RHCCPAGFRC 10
RH P GF C
Sbjct: 430 RHRFPMGFVC 439
>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)
Query: 3 CCPAGF 8
CCP G+
Sbjct: 446 CCPGGY 451
>sp|MCP_EHV2|MAJOR capsid protein|Equine herpesvirus 2 (strain 86/87)
Query: 1 RHCCPAGFRC 10
RH AGF C
Sbjct: 1159 RHLLNAGFAC 1168
>sp|ENV_SIVML|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate K78)
Query: 1 RHCCPAGF---RC 10
R+C P G+ RC
Sbjct: 233 RYCAPPGYALLRC 245
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 CCPAGF 8
C PAGF
Sbjct: 213 CAPAGF 218
>sp|ENV_SIVM2|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate Mm251)
Query: 1 RHCCPAGF---RC 10
R+C P G+ RC
Sbjct: 233 RYCAPPGYALLRC 245
>sp|ENV_SIVMK|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate K6W)
Query: 1 RHCCPAGF---RC 10
R+C P G+ RC
Sbjct: 233 RYCAPPGYALLRC 245
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAG---FRC 10
+C PAG F+C
Sbjct: 213 YCAPAGYAIFKC 224
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P G+ RC
Sbjct: 224 RYCAPPGYALLRC 236
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 212 YCAPAGF 218
>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)
Query: 1 RHCCPAGFR 9
R C P GF+
Sbjct: 2503 RFCTPVGFQ 2511
>sp|ENV_SIVS4|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate
Query: 1 RHCCPAGF---RC 10
R+C P G+ RC
Sbjct: 232 RYCAPPGYALLRC 244
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 1 RHCCPAGFR 9
R C P GF+
Sbjct: 2503 RFCTPVGFQ 2511
>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)
Query: 1 RHCCPAGFR 9
R C P GF+
Sbjct: 2621 RFCTPLGFQ 2629
>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)
Query: 3 CCPAGFRC 10
C PA F C
Sbjct: 468 CSPAYFNC 475
>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)
Query: 3 CCPAGFRC 10
C PA F C
Sbjct: 468 CSPAYFNC 475
>sp|ENV_SIVSP|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate
Query: 1 RHCCPAGF---RC 10
R+C P G+ RC
Sbjct: 237 RYCAPPGYALLRC 249
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 1 RHCCPAGFR 9
R C P GF+
Sbjct: 2621 RFCTPLGFQ 2629
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 214 YCAPAGF 220
>sp|ENV_SIVM1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate Mm142-83)
Query: 1 RHCCPAGF---RC 10
R+C P G+ RC
Sbjct: 234 RYCAPPGYALLRC 246
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAG+
Sbjct: 208 YCAPAGY 214
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAG+
Sbjct: 217 YCAPAGY 223
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAG+
Sbjct: 214 YCAPAGY 220
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAG+
Sbjct: 219 YCAPAGY 225
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAG+
Sbjct: 215 YCAPAGY 221
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P G+ RC
Sbjct: 225 RYCAPPGYALLRC 237
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P G+ RC
Sbjct: 216 RYCAPPGYALLRC 228
>sp|INTG_BPPF1|PUTATIVE integrase|Pseudomonas phage Pf1 (Bacteriophage Pf1)
Query: 4 CPAGFRC 10
C A FRC
Sbjct: 248 CRAAFRC 254
>sp|NEC1_EHV2|NUCLEAR egress protein 1|Equine herpesvirus 2 (strain 86/87)
Query: 2 HCCPAGFRC 10
H C GF C
Sbjct: 112 HACNMGFYC 120
>sp|MCP_GAHVM|MAJOR capsid protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 2 HCCPAG 7
HC PAG
Sbjct: 5 HCPPAG 10
113|Sequence|561|570|AGFRCAARGT
>sp|FIBER_BPSPP|TAIL spike protein|Bacillus phage SPP1 (Bacteriophage SPP1)
Query: 1 AGFRCAARGT 10
+GFRC RGT
Sbjct: 1080 SGFRCYVRGT 1089
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 2 GFRCAARGT 10
FRC AR T
Sbjct: 595 AFRCVARST 603
>sp|VE1_MNPVA|REPLICATION protein E1|Mastomys natalensis papillomavirus (isolate African
Query: 3 FRCAARGT 10
F C ARGT
Sbjct: 591 FSCCARGT 598
>sp|HEMA_CVPV|HEMAGGLUTININ-ESTERASE coronavirus (PV) (Puffinosis virus)
Query: 2 GFRCAARG 9
GF+C A G
Sbjct: 115 GFKCLAEG 122
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 4 RCAARGT 10
+CA+RGT
Sbjct: 263 QCASRGT 269
>sp|HEMA_CVMA5|HEMAGGLUTININ-ESTERASE coronavirus (strain A59) (MHV-A59)
Query: 2 GFRCAARG 9
GF+C A G
Sbjct: 112 GFKCLAHG 119
114|Sequence|566|575|AARGTKCLRR
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 3 RGTKCLRR 10
+G KC+RR
Sbjct: 5804 KGIKCVRR 5811
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 3 RGTKCLRR 10
+G KC+RR
Sbjct: 5802 KGIKCVRR 5809
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 3 RGTKCLRR 10
+G KC+RR
Sbjct: 5802 KGIKCVRR 5809
>sp|POL2_GCMV|RNA2 polyprotein|Grapevine chrome mosaic virus (GCMV)
Query: 4 GTKCLR 9
GT+CLR
Sbjct: 129 GTRCLR 134
>sp|242L_IIV6|PUTATIVE GIY-YIG domain-containing protein 242L|Invertebrate iridescent
Query: 2 ARGTKCLR 9
+G KCLR
Sbjct: 37 GKGAKCLR 44
115|Sequence|571|580|KCLRREAPRW
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 CLRREAPRW 10
C RR P W
Sbjct: 330 CRRRRRPSW 338
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 CLRREAPRW 10
C RR P W
Sbjct: 330 CRRRRRPSW 338
>sp|DPOL_SFAVA|DNA polymerase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)
Query: 3 LRREAPRW 10
L+RE P+W
Sbjct: 983 LQRENPKW 990
>sp|GD_SUHVR|ENVELOPE glycoprotein D|Suid herpesvirus 1 (strain Rice)
Query: 1 KCLRREAPRW 10
+C RR P W
Sbjct: 125 RCRRRTTPMW 134
>sp|LT_SV40|LARGE T antigen|Simian virus 40 (SV40)
Query: 1 KCLRREAP 8
KC+++E P
Sbjct: 304 KCIKKEQP 311
>sp|PORTL_PSHV1|PORTAL protein|Psittacid herpesvirus 1 (isolate Amazon
Query: 3 LRREAPRW 10
+RR PRW
Sbjct: 750 VRRSVPRW 757
116|Sequence|576|585|EAPRWDAPLR
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 1 EAPRWDAPLR 10
E PRW+ LR
Sbjct: 279 ECPRWNQQLR 288
>sp|P3_RDVA|OUTER capsid protein P3|Rice dwarf virus (isolate Akita)
Query: 3 PRWDAPLR 10
PRWD LR
Sbjct: 733 PRWDNFLR 740
>sp|P3_RDVF|OUTER capsid protein P3|Rice dwarf virus (isolate Fujian)
Query: 3 PRWDAPLR 10
PRWD LR
Sbjct: 733 PRWDNFLR 740
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 APRWD 6
APRWD
Sbjct: 1157 APRWD 1161
>sp|POL_AVIRE|GAG-POL polyprotein|Avian reticuloendotheliosis virus
Query: 2 APRWDAP 8
PRWD P
Sbjct: 1092 GPRWDGP 1098
>sp|DNRE_BPT4|DNA replication protein|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 EAPRWDAPLR 10
+AP W PL+
Sbjct: 338 KAPHWHEPLK 347
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 3 PRWDAP 8
P+WD P
Sbjct: 462 PQWDTP 467
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 2 APRWD 6
APRWD
Sbjct: 296 APRWD 300
>sp|VF859_ASFB7|PROBABLE helicase A859L|African swine fever virus (strain
Query: 2 APRWDAPL 9
PR+D PL
Sbjct: 330 TPRYDTPL 337
>sp|VF859_ASFM2|PROBABLE helicase A859L|African swine fever virus (isolate
Query: 3 PRWDAPL 9
PR+D PL
Sbjct: 331 PRYDTPL 337
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EAPRWDA 7
E PRWDA
Sbjct: 527 ERPRWDA 533
>sp|VF859_ASFK5|PROBABLE helicase A859L|African swine fever virus (isolate
Query: 3 PRWDAPL 9
PR+D PL
Sbjct: 331 PRYDTPL 337
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EAPRWDA 7
E PRWDA
Sbjct: 526 ERPRWDA 532
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EAPRWDA 7
E PRWDA
Sbjct: 527 ERPRWDA 533
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EAPRWDA 7
E PRWDA
Sbjct: 526 ERPRWDA 532
>sp|VF859_ASFWA|PROBABLE helicase A859L|African swine fever virus (isolate
Query: 3 PRWDAPL 9
PR+D PL
Sbjct: 331 PRYDTPL 337
>sp|VF859_ASFP4|PROBABLE helicase A859L|African swine fever virus (isolate
Query: 3 PRWDAPL 9
PR+D PL
Sbjct: 331 PRYDTPL 337
>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte
Query: 1 EAPRW 5
EAPRW
Sbjct: 1699 EAPRW 1703
117|Sequence|581|593|DAPLRDPALRQLL
>sp|VPN2_BPPHE|PUTATIVE major capsid protein|Enterococcus phage phiEF24C (Enterococcus
Query: 2 APLRDPALRQ 11
AP+ DP LRQ
Sbjct: 97 APISDPNLRQ 106
>sp|CAPSD_BPPGK|MAJOR capsid protein|Staphylococcus phage K
Query: 2 APLRDPALRQ 11
AP+ DP +RQ
Sbjct: 101 APVSDPNIRQ 110
>sp|CAPSD_BPS25|MAJOR capsid protein|Staphylococcus phage S25-3
Query: 2 APLRDPALRQ 11
AP+ DP +RQ
Sbjct: 101 APVSDPNIRQ 110
>sp|CAPSD_BPS24|MAJOR capsid protein|Staphylococcus phage S25-4
Query: 2 APLRDPALRQ 11
AP+ DP +RQ
Sbjct: 101 APVSDPNIRQ 110
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 LRDPALRQLL 13
+ DPALRQ L
Sbjct: 849 MHDPALRQSL 858
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 LRDPALRQLL 13
+ DPALRQ L
Sbjct: 849 MHDPALRQSL 858
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 LRDPALRQLL 13
+ DPALRQ L
Sbjct: 849 MHDPALRQSL 858
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 LRDPALRQLL 13
+ DPALRQ L
Sbjct: 849 MHDPALRQSL 858
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 LRDPALRQLL 13
+ DPALRQ L
Sbjct: 849 MHDPALRQSL 858
>sp|P78_NPVAC|PROTEIN P78/83|Autographa californica nuclear polyhedrosis virus
Query: 4 LRDPALRQLL 13
+RDP+LRQ L
Sbjct: 95 VRDPSLRQSL 104
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 LRDPALRQLL 13
+ DPA+RQ L
Sbjct: 839 MHDPAIRQSL 848
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 LRDPALRQLL 13
+ DPA+RQ L
Sbjct: 849 MHDPAIRQSL 858
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 DPALRQLL 13
DPALR+L+
Sbjct: 18 DPALRRLM 25
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 DPALRQLL 13
DPALR+L+
Sbjct: 18 DPALRRLM 25
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 LRDPALRQLL 13
+ DPA+RQ L
Sbjct: 849 MHDPAIRQSL 858
>sp|ACTC_BPMU|LATE transcription activator C|Escherichia phage Mu (Bacteriophage Mu)
Query: 6 DPALRQLL 13
DPA+RQL+
Sbjct: 9 DPAIRQLI 16
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 3 PLRDPALRQLL 13
P RDP RQ++
Sbjct: 432 PPRDPTERQVI 442
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 3 PLRDPALRQLL 13
P RDP RQ++
Sbjct: 431 PPRDPTERQVI 441
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 3 PLRDPALRQLL 13
P RDP RQ++
Sbjct: 432 PPRDPTERQVI 442
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 2 APLRDPALRQLL 13
A L+DPA R+L+
Sbjct: 74 ANLQDPASRELV 85
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 APLRDPALRQLL 13
A L+DPA R+L+
Sbjct: 103 ANLQDPASRELV 114
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 7 PALRQLL 13
PALRQLL
Sbjct: 470 PALRQLL 476
>sp|PORTL_BPN4|PROBABLE portal protein|Enterobacteria phage N4 (Bacteriophage N4)
Query: 3 PLRDPAL 9
P RDPAL
Sbjct: 749 PTRDPAL 755
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 7 PALRQLL 13
PALRQLL
Sbjct: 472 PALRQLL 478