1|SequenceR|10|1|LAVWSVLTWM
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2155 IWSLMAW 2161
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 1989 IWSLIAW 1995
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 AVWSVLTWM 10
++W+ +TWM
Sbjct: 613 SIWNNMTWM 621
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 598 IWNNMTWM 605
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2156 IWSLVAW 2162
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2156 IWSLVAW 2162
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 608 IWNNMTWM 615
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2155 IWSLVAW 2161
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W LTWM
Sbjct: 613 IWDNLTWM 620
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VWSVLTW 9
+WS++ W
Sbjct: 2153 IWSLVAW 2159
>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 WSVLTWM 10
WSV+T M
Sbjct: 16 WSVMTAM 22
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 613 IWNNMTWM 620
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 617 IWENMTWM 624
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 609 IWDNMTWM 616
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 615 IWNNMTWM 622
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 624 IWNNMTWM 631
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 616 IWGNMTWM 623
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 622 IWNNMTWM 629
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 619 IWNNMTWM 626
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 631 IWNNMTWM 638
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 625 IWDNMTWM 632
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 612 IWGNMTWM 619
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LAVWSVL 7
LAVW+ L
Sbjct: 133 LAVWAAL 139
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LAVWSVL 7
LAVW+ L
Sbjct: 133 LAVWAAL 139
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 617 IWNNMTWM 624
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 612 IWQNMTWM 619
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 610 IWDNMTWM 617
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 623 IWNNMTWM 630
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 622 IWNNMTWM 629
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 609 IWDNMTWM 616
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 633 IWDNMTWM 640
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 618 IWNNMTWM 625
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 627 IWNNMTWM 634
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 619 IWQNMTWM 626
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 618 IWDNMTWM 625
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 621 IWQNMTWM 628
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 619 IWQNMTWM 626
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 621 IWDNMTWM 628
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 622 IWGNMTWM 629
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W+ +TWM
Sbjct: 634 IWNNMTWM 641
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 628 IWDNMTWM 635
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 611 IWDNMTWM 618
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VWSVLTWM 10
+W +TWM
Sbjct: 621 IWDNMTWM 628
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 AVWSVLTW 9
++W LTW
Sbjct: 621 SIWDTLTW 628
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 4 WSVLTW 9
WS+ W
Sbjct: 1259 WSISNW 1264
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 3 VWSVLT 8
VW VLT
Sbjct: 13 VWPVLT 18
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 WSVLTW 9
W +L W
Sbjct: 3456 WGILYW 3461
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 VWSVLT 8
VW VLT
Sbjct: 13 VWPVLT 18
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 3 VWSVLT 8
VW VLT
Sbjct: 13 VWPVLT 18
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WSVLTWM 10
W+ +TWM
Sbjct: 621 WNNMTWM 627
2|SequenceR|15|6|VLGATLAVWS
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 1 VLGATLAVW 9
+ GAT A+W
Sbjct: 432 IQGATFALW 440
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 1 VLGATLAVW 9
+ G+T A+W
Sbjct: 431 IQGSTFALW 439
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 3 GATLAVW 9
G+T A+W
Sbjct: 433 GSTFALW 439
3|SequenceR|20|11|CRTGAVLGAT
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 RTGAVLGAT 10
R GA+LG T
Sbjct: 3516 RDGAILGVT 3524
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 1 CRTGAVLGA 9
CR AVLG+
Sbjct: 364 CRKLAVLGS 372
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 2 RTGAVLGA 9
R+GA +GA
Sbjct: 308 RSGATIGA 315
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 2 RTGAVLGA 9
R+GA +GA
Sbjct: 353 RSGATVGA 360
>sp|PHOSP_MUMP1|PHOSPHOPROTEIN virus (strain SBL-1) (MuV)
Query: 2 RTGAVLGAT 10
R+G++ GAT
Sbjct: 182 RSGSLSGAT 190
>sp|PHOSP_MUMPS|PHOSPHOPROTEIN virus (strain SBL) (MuV)
Query: 2 RTGAVLGAT 10
R+G++ GAT
Sbjct: 183 RSGSLSGAT 191
>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)
Query: 2 RTGAVLGAT 10
R+G++ GAT
Sbjct: 183 RSGSLSGAT 191
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CRTGAVL 7
C TGA++
Sbjct: 58 CHTGAMM 64
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 2 RTGAVLGAT 10
R+G++ GAT
Sbjct: 183 RSGSLSGAT 191
>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain
Query: 2 RTGAVLGAT 10
R+G++ GAT
Sbjct: 183 RSGSLSGAT 191
>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain
Query: 2 RTGAVLGAT 10
R+G++ GAT
Sbjct: 183 RSGSLSGAT 191
4|SequenceR|25|16|FQGDPCRTGA
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FQGDPCRTGA 10
+ GDPC GA
Sbjct: 473 YSGDPCYNGA 482
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 FQGDPCRTGA 10
+ GDPC GA
Sbjct: 473 YSGDPCYNGA 482
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 2 QGDPC 6
QGDPC
Sbjct: 445 QGDPC 449
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 FQGDPCRTG 9
F+G P +TG
Sbjct: 2021 FEGPPIKTG 2029
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 FQGDPCRTG 9
F+G P +TG
Sbjct: 2021 FEGPPIKTG 2029
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 PCRTGA 10
PC TGA
Sbjct: 466 PCETGA 471
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FQGDPCR 7
F GDP R
Sbjct: 1948 FSGDPLR 1954
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 2 QGDPC 6
QG+PC
Sbjct: 450 QGEPC 454
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 FQGDPCRTG 9
F+ DP R G
Sbjct: 409 FRADPGRNG 417
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 FQGDPCRTG 9
F+ DP R G
Sbjct: 409 FRADPGRNG 417
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GDPCRT 8
G PC+T
Sbjct: 610 GSPCKT 615
>sp|PG112_VAR67|LATE protein OPG112|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 GDPCRTGA 10
GD C+T A
Sbjct: 73 GDECKTHA 80
>sp|PG112_VACCC|LATE protein OPG112|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GDPCRTGA 10
GD C+T A
Sbjct: 73 GDECKTHA 80
>sp|PG112_VACCA|LATE protein OPG112|Vaccinia virus (strain Ankara) (VACV)
Query: 3 GDPCRTGA 10
GD C+T A
Sbjct: 73 GDECKTHA 80
>sp|H7_VARV|LATE protein H7|Variola virus
Query: 3 GDPCRTGA 10
GD C+T A
Sbjct: 73 GDECKTHA 80
>sp|H7_VACCT|LATE protein H7|Vaccinia virus (strain Tian Tan)
Query: 3 GDPCRTGA 10
GD C+T A
Sbjct: 73 GDECKTHA 80
>sp|VE8E2_HPV16|PROTEIN E8^E2C|Human papillomavirus type 16
Query: 3 GDPCRT 8
G+PC T
Sbjct: 60 GNPCHT 65
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 3 GDPCRT 8
G+PC T
Sbjct: 248 GNPCHT 253
Query: 1 FQGDPCRT 8
F GD C T
Sbjct: 121 FDGDICNT 128
5|SequenceR|30|21|CAVPCFQGDP
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 2 AVPCF 6
AVPCF
Sbjct: 91 AVPCF 95
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 AVPCF 6
AVPCF
Sbjct: 91 AVPCF 95
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 5 CFQGDP 10
C QGDP
Sbjct: 1149 CQQGDP 1154
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 5 CFQGDP 10
C QGDP
Sbjct: 1148 CQQGDP 1153
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 5 CFQGDP 10
C QGDP
Sbjct: 1148 CQQGDP 1153
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 PCFQGD 9
PC +GD
Sbjct: 1516 PCLKGD 1521
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AVPCF 6
AVPCF
Sbjct: 96 AVPCF 100
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 AVPCF 6
AVPCF
Sbjct: 96 AVPCF 100
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 VP-CFQGDP 10
VP CF G+P
Sbjct: 2186 VPKCFMGNP 2194
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 VP-CFQGDP 10
VP CF G+P
Sbjct: 2186 VPKCFMGNP 2194
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 VPCFQGD 9
+PCFQ +
Sbjct: 1462 LPCFQNN 1468
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 VPCFQGD 9
+PCFQ +
Sbjct: 1464 LPCFQNN 1470
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 3 VPCFQGD 9
+PCFQ +
Sbjct: 1464 LPCFQNN 1470
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 VPCFQGD 9
+PCFQ +
Sbjct: 1465 LPCFQNN 1471
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 VPCFQGD 9
+PCFQ +
Sbjct: 1464 LPCFQNN 1470
>sp|ORF23_TTVV1|PROBABLE protein VP2|Torque teno virus (strain VT416)
Query: 3 VPCFQG 8
+PC+QG
Sbjct: 278 LPCYQG 283
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 CAVPCFQGDP 10
CA C++ DP
Sbjct: 278 CAPCCYEKDP 287
>sp|ORF23_TTVV2|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 3 VPCFQG 8
+PC+QG
Sbjct: 278 LPCYQG 283
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 5 CFQGD 9
CF+GD
Sbjct: 603 CFKGD 607
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 5 CFQGD 9
CF+GD
Sbjct: 603 CFKGD 607
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 5 CFQGD 9
CF+GD
Sbjct: 603 CFKGD 607
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 5 CFQGD 9
CF+GD
Sbjct: 603 CFKGD 607
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 VPCFQGDP 10
VP F G P
Sbjct: 1904 VPLFNGRP 1911
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 VPCFQGDP 10
VP F G P
Sbjct: 1904 VPLFNGRP 1911
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CAVPCFQG 8
C PCF G
Sbjct: 379 CRRPCFSG 386
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CAVPCFQG 8
C PCF G
Sbjct: 379 CRRPCFSG 386
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CAVPCFQG 8
C PCF G
Sbjct: 379 CRRPCFSG 386
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 AVPCFQGD 9
+ PC +GD
Sbjct: 55 STPCHRGD 62
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AVPCFQGD 9
+ PC +GD
Sbjct: 65 STPCHRGD 72
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 AVPCFQGD 9
+ PC +GD
Sbjct: 65 STPCHRGD 72
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 CAVPCFQGD 9
C +P F G+
Sbjct: 462 CKIPTFLGN 470
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 3 VPCFQGDP 10
VP F+G P
Sbjct: 428 VPGFEGRP 435
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 VPCFQGDP 10
VP F+G P
Sbjct: 428 VPGFEGRP 435
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 PCFQGD 9
PC +GD
Sbjct: 1516 PCSKGD 1521
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 PCFQGD 9
PC +GD
Sbjct: 1516 PCSKGD 1521
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 PCFQGD 9
PC +GD
Sbjct: 1516 PCSKGD 1521
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 3 VPCFQGDP 10
VP F+G P
Sbjct: 428 VPGFEGRP 435
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 1 CAVPCFQGDP 10
C V C G P
Sbjct: 14 CVVSCLAGTP 23
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 1 CAVPCFQGDP 10
C V C G P
Sbjct: 14 CVVSCLAGTP 23
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CAVPC 5
C VPC
Sbjct: 1972 CPVPC 1976
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 CAVPC 5
C VPC
Sbjct: 419 CDVPC 423
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CAVPC 5
C VPC
Sbjct: 1972 CPVPC 1976
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 1 CAVPC 5
C VPC
Sbjct: 420 CDVPC 424
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 CAVPC 5
C VPC
Sbjct: 420 CDVPC 424
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 CAVPC 5
C VPC
Sbjct: 420 CDVPC 424
6|SequenceR|35|26|GPDLCCAVPC
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 2 PDLCCAVP 9
P +CCA+P
Sbjct: 496 PSMCCALP 503
>sp|U6_HHV6Z|UNCHARACTERIZED protein U6|Human herpesvirus 6B (strain Z29)
Query: 2 PDLCCAVPC 10
P+L AVPC
Sbjct: 2 PNLAAAVPC 10
>sp|U6_HHV6U|UNCHARACTERIZED protein U6|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PDLCCAVPC 10
P+L AVPC
Sbjct: 16 PNLAAAVPC 24
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 GPDLCCAVP 9
GPD C +VP
Sbjct: 316 GPDGCQSVP 324
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 2 PDLCCAVP 9
P CCA+P
Sbjct: 512 PATCCALP 519
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 2 PDLCCAVP 9
P CCA+P
Sbjct: 512 PATCCALP 519
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 GPDLCCAVP 9
G D+ CA+P
Sbjct: 678 GEDIFCAMP 686
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 GPDLCCAVP 9
G D+ CA+P
Sbjct: 678 GEDIFCAMP 686
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 1 GPDLCCAVP 9
G D+ CA+P
Sbjct: 677 GEDIFCAMP 685
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 GPDLCCAVP 9
G D+ CA+P
Sbjct: 677 GEDIFCAMP 685
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 DLCCAV 8
DLCC++
Sbjct: 1171 DLCCSL 1176
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 DLCCAVPC 10
+ CC V C
Sbjct: 276 EFCCQVMC 283
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 PDLCCAVP 9
P LC VP
Sbjct: 81 PSLCFVVP 88
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 4 LCCAV 8
LCCA+
Sbjct: 10 LCCAI 14
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 LCCAV 8
LCCA+
Sbjct: 10 LCCAI 14
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 4 LCCAVP 9
+CCA P
Sbjct: 196 VCCATP 201
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 LCCAVP 9
+CC VP
Sbjct: 795 MCCVVP 800
>sp|PG138_MONPV|25 kDa core protein OPG138|Monkeypox virus (MPXV)
Query: 2 PDLCC 6
PD CC
Sbjct: 180 PDDCC 184
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 DLCCAV 8
D CC++
Sbjct: 1638 DTCCSI 1643
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LCCAVPC 10
LC AV C
Sbjct: 133 LCAAVGC 139
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LCCAVPC 10
LC AV C
Sbjct: 133 LCAAVGC 139
>sp|PG138_VACCC|25 kDa core protein OPG138|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PDLCC 6
PD CC
Sbjct: 182 PDDCC 186
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 LCCAVP 9
+CC VP
Sbjct: 795 VCCVVP 800
>sp|PG138_VACCA|25 kDa core protein OPG138|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PDLCC 6
PD CC
Sbjct: 177 PDDCC 181
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 LCCAVP 9
+CC VP
Sbjct: 796 VCCVVP 801
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 LCCAVP 9
+CC VP
Sbjct: 796 VCCVVP 801
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 GPDLCCAVPC 10
GP C PC
Sbjct: 394 GPGGVCTPPC 403
7|SequenceR|40|31|SYSAGGPDLC
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 4 AGGPDLC 10
AG PD C
Sbjct: 309 AGAPDRC 315
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 4 AGGPDLC 10
AG PD C
Sbjct: 309 AGAPDRC 315
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 4 AGGPDLC 10
AG PD C
Sbjct: 309 AGAPDRC 315
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 SYSAGGPD 8
SY++ GPD
Sbjct: 1098 SYTSVGPD 1105
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 SYSAGGPD 8
SY++ GPD
Sbjct: 1109 SYNSVGPD 1116
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 SYSAGGP 7
++SAGGP
Sbjct: 2193 AFSAGGP 2199
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 SYSAGGPD 8
SY + GPD
Sbjct: 1106 SYDSVGPD 1113
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 3 SAGGPDL 9
+ GGPD+
Sbjct: 313 AKGGPDM 319
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 SAGGPDL 9
+ GGPD+
Sbjct: 313 AKGGPDM 319
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 3 SAGGPD 8
SAG PD
Sbjct: 162 SAGAPD 167
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 5 GGPDL 9
GGPD+
Sbjct: 315 GGPDM 319
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 AGGPDLC 10
AG P LC
Sbjct: 200 AGSPALC 206
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 SYSAGGPDLC 10
+YS P LC
Sbjct: 37 AYSLEDPTLC 46
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 SYSAGGPDLC 10
+YS P LC
Sbjct: 37 AYSLEDPTLC 46
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 SYSAGGPDLC 10
+YS P LC
Sbjct: 37 AYSLEDPTLC 46
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 YSAGGPDLC 10
Y AGG LC
Sbjct: 264 YLAGGAALC 272
8|SequenceR|45|36|LPRCCSYSAG
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 1 LPRCCSYSAG 10
LPR C+Y+ G
Sbjct: 390 LPRGCTYTFG 399
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 LPRCCSYS 8
L RCC +S
Sbjct: 693 LYRCCPFS 700
>sp|UL30_HCMVA|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPRCCSYS 8
LP CC S
Sbjct: 100 LPNCCQVS 107
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PRCCSYSAG 10
P CS+SAG
Sbjct: 22 PPSCSFSAG 30
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 RCCSYSAG 10
RCC + G
Sbjct: 1360 RCCPFVCG 1367
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 4 CCSYS 8
CCS+S
Sbjct: 553 CCSFS 557
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 4 CCSYS 8
CCS+S
Sbjct: 538 CCSFS 542
>sp|UL30_HCMVM|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LPRCCSYS 8
LP CC S
Sbjct: 100 LPNCCQVS 107
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 PRCCSYSA 9
P C SYS+
Sbjct: 321 PVCISYSS 328
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 4 CCSYSA 9
CC+Y A
Sbjct: 517 CCAYKA 522
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 PRCCSYS 8
PR C Y+
Sbjct: 821 PRLCEYT 827
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 CCSYSA 9
CC Y A
Sbjct: 2100 CCDYQA 2105
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 PRCCS 6
P CCS
Sbjct: 285 PMCCS 289
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 PRCCSY 7
PR C+Y
Sbjct: 821 PRLCAY 826
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 PRCCSYSA 9
P CC ++
Sbjct: 324 PMCCEFNG 331
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 PRCCSYSA 9
P CC ++
Sbjct: 324 PMCCEFNG 331
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 LPRCCSYSAG 10
LPR YS G
Sbjct: 1959 LPRRLGYSRG 1968
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 LPRCCSYSAG 10
LPR YS G
Sbjct: 1959 LPRRLGYSRG 1968
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 PRCCSYSA 9
P CC ++
Sbjct: 323 PMCCEFNG 330
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 PRCCSYSA 9
P CC ++
Sbjct: 323 PMCCEFNG 330
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 PRCCSYSAG 10
PR CS G
Sbjct: 161 PRMCSLMQG 169
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 PRCCSY 7
PR C Y
Sbjct: 821 PRLCQY 826
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 PRCCSY 7
PR C Y
Sbjct: 822 PRLCQY 827
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 4 CCSYSA 9
CC Y A
Sbjct: 447 CCPYKA 452
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 PRCCSY 7
PR C Y
Sbjct: 819 PRLCQY 824
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 PRCCSY 7
PR C Y
Sbjct: 822 PRLCQY 827
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 PRCCSY 7
PR C Y
Sbjct: 821 PRLCQY 826
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 PRCCSY 7
PR C Y
Sbjct: 820 PRLCQY 825
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 PRCCSY 7
PR C Y
Sbjct: 822 PRLCQY 827
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 PRCCSY 7
PR C Y
Sbjct: 820 PRLCQY 825
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 PRCCSY 7
PR C Y
Sbjct: 820 PRLCQY 825
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 PRCCSY 7
PR C Y
Sbjct: 820 PRLCQY 825
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 CCSYS 8
CCSYS
Sbjct: 2423 CCSYS 2427
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 CSYSAG 10
C+YSAG
Sbjct: 130 CNYSAG 135
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 CCSYSA 9
CC YS
Sbjct: 1384 CCLYSG 1389
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 4 CCSYSA 9
CC Y A
Sbjct: 386 CCPYKA 391
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 4 CCSYSA 9
CC Y A
Sbjct: 513 CCPYKA 518
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 CCSYSAG 10
CC +AG
Sbjct: 896 CCDCTAG 902
9|SequenceR|50|41|PWKDLLPRCC
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 WKDLLPRC 9
WK LL RC
Sbjct: 1123 WKQLLSRC 1130
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 WKDLLPRC 9
WK LL RC
Sbjct: 1124 WKQLLSRC 1131
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 2 WKDLLPRC 9
WK LL RC
Sbjct: 1123 WKQLLSRC 1130
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 WKDLLPRC 9
WK LL RC
Sbjct: 1123 WKQLLSRC 1130
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 WKDLLPRC 9
WK LL RC
Sbjct: 1121 WKQLLSRC 1128
>sp|ORF3_TTVG1|UNCHARACTERIZED ORF3 protein|Torque teno midi virus 1
Query: 3 KDLLPRC 9
K LLPRC
Sbjct: 155 KTLLPRC 161
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 WKDLLPR 8
WKDLL +
Sbjct: 1992 WKDLLKK 1998
Query: 2 WKDLL 6
WKD+L
Sbjct: 934 WKDIL 938
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 WKDLLP 7
W DLLP
Sbjct: 992 WYDLLP 997
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 WKDLLP 7
W DLLP
Sbjct: 992 WYDLLP 997
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 1 PWKDLLPR 8
P+K LLPR
Sbjct: 557 PYKCLLPR 564
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 WKDLLP 7
W DLLP
Sbjct: 993 WYDLLP 998
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 WKDLLPRC 9
WK L RC
Sbjct: 559 WKQELVRC 566
>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 WKDLLPRC 9
WK LP+C
Sbjct: 254 WKPELPKC 261
>sp|UL30_HCMVA|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 LLPRCC 10
+LP CC
Sbjct: 99 VLPNCC 104
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 WKDLLP 7
W D++P
Sbjct: 527 WADMMP 532
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 WKDLLP 7
WK L P
Sbjct: 1081 WKQLFP 1086
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 WKDLL 6
WKD+L
Sbjct: 843 WKDIL 847
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 WKDLLP 7
W +LLP
Sbjct: 1032 WSELLP 1037
>sp|UL30_HCMVM|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 LLPRCC 10
+LP CC
Sbjct: 99 VLPNCC 104
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 3 KDLLPRC 9
KD+ P C
Sbjct: 12 KDIYPSC 18
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 PWKDLLPRCC 10
PW+ L + C
Sbjct: 1107 PWQWLRKKAC 1116
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 PWKDLLPRCC 10
PW+ L + C
Sbjct: 1107 PWQWLRKKAC 1116
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 5 LLPRCC 10
LLP CC
Sbjct: 786 LLPCCC 791
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 WKDLLPRCC 10
WK +P CC
Sbjct: 438 WKYCIP-CC 445
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 LLPRCC 10
LLP CC
Sbjct: 785 LLPCCC 790
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 PWKDLLPRCC 10
PW+ L + C
Sbjct: 1104 PWQWLKKKAC 1113
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 LLPRCC 10
LLP CC
Sbjct: 785 LLPCCC 790
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 LLPRCC 10
LLP CC
Sbjct: 785 LLPCCC 790
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 5 LLPRCC 10
LLP CC
Sbjct: 786 LLPCCC 791
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PWKDLLPRCC 10
PW+ L + C
Sbjct: 1104 PWQWLKKKAC 1113
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 WKDLL 6
WKDLL
Sbjct: 2565 WKDLL 2569
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 PWKDLLPRCC 10
PW+ L + C
Sbjct: 1105 PWQWLKKKAC 1114
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 LLPRCC 10
LLP CC
Sbjct: 786 LLPCCC 791
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 PWKDLLPRCC 10
PW+ L + C
Sbjct: 1105 PWQWLKKKAC 1114
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 PWKDLL 6
P+KDLL
Sbjct: 337 PFKDLL 342
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 WKDLL 6
WKDLL
Sbjct: 2565 WKDLL 2569
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 WKDLL 6
WKDLL
Sbjct: 2540 WKDLL 2544
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 PWKDLLPRCC 10
PW+ L + C
Sbjct: 1105 PWQWLKKKAC 1114
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WKDLL 6
WKDLL
Sbjct: 2542 WKDLL 2546
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WKDLL 6
WKDLL
Sbjct: 2542 WKDLL 2546
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WKDLL 6
WKDLL
Sbjct: 2542 WKDLL 2546
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WKDLL 6
WKDLL
Sbjct: 2542 WKDLL 2546
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WKDLL 6
WKDLL
Sbjct: 2542 WKDLL 2546
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 WKDLL 6
WKDLL
Sbjct: 2565 WKDLL 2569
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 WKDLL 6
WKDLL
Sbjct: 2543 WKDLL 2547
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WKDLL 6
WKDLL
Sbjct: 2543 WKDLL 2547
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 WKDLL 6
WKDLL
Sbjct: 2543 WKDLL 2547
10|SequenceR|55|46|RSLTTPWKDL
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 LTTPWKD 9
+ TPWKD
Sbjct: 66 MNTPWKD 72
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 SLTTPWKDL 10
+L PW+DL
Sbjct: 81 TLEAPWQDL 89
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 RSLTTPW 7
R +TTPW
Sbjct: 217 RCVTTPW 223
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 3 LTTPWKDL 10
++ PW+DL
Sbjct: 489 ISLPWQDL 496
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 1 RSLTTPWKDL 10
R PWK+L
Sbjct: 256 RPTRKPWKEL 265
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 TPWKD 9
TPW D
Sbjct: 302 TPWSD 306
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 TPWKD 9
TPW D
Sbjct: 302 TPWSD 306
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 TPWKD 9
TPW D
Sbjct: 302 TPWSD 306
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 5 TPWKDL 10
TPWK L
Sbjct: 2109 TPWKQL 2114
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 SLTTPWKD 9
S+ TPW D
Sbjct: 302 SIETPWMD 309
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 TTPWKDL 10
T PW +L
Sbjct: 37 TIPWTEL 43
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 TTPWKDL 10
T PW +L
Sbjct: 37 TIPWTEL 43
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 TTPWKDL 10
T PW +L
Sbjct: 37 TIPWTEL 43
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 6 PWKDL 10
PWKD+
Sbjct: 1163 PWKDM 1167
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 6 PWKDL 10
PWKD+
Sbjct: 1163 PWKDM 1167
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 5 TPWK 8
TPWK
Sbjct: 255 TPWK 258
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 6 PWKDL 10
PWKD+
Sbjct: 1153 PWKDI 1157
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SLTTPWKD 9
S+ TPW D
Sbjct: 303 SIQTPWID 310
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SLTTPWKD 9
S+ TPW D
Sbjct: 303 SIQTPWID 310
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 4 TTPWKDL 10
T P+KDL
Sbjct: 469 TDPYKDL 475
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 RSLTTPWK 8
+ LT PW+
Sbjct: 496 QDLTLPWQ 503
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 RSLTTPWK 8
+ LT PW+
Sbjct: 496 QDLTLPWQ 503
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RSLTTPWK 8
+ LT PW+
Sbjct: 496 QDLTLPWQ 503
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 RSLTTPWK 8
+ LT PW+
Sbjct: 496 QDLTLPWQ 503
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 RSLTTPWK 8
+ LT PW+
Sbjct: 496 QDLTLPWQ 503
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 RSLTTPWK 8
+ LT PW+
Sbjct: 496 QDLTLPWQ 503
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RSLTTPWK 8
+ LT PW+
Sbjct: 496 QDLTLPWQ 503
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 RSLTTPWK 8
+ LT PW+
Sbjct: 496 QDLTLPWQ 503
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 RSLTTPWK 8
+ LT PW+
Sbjct: 496 QDLTLPWQ 503
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 RSLTTPWK 8
+ LT PW+
Sbjct: 496 QDLTLPWQ 503
11|SequenceR|60|51|PGGLHRSLTT
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 GGLHRSL 8
GGLH++L
Sbjct: 482 GGLHQAL 488
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 GGLHRSL 8
GGLH++L
Sbjct: 554 GGLHQAL 560
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 GGLHRSL 8
GGLH++L
Sbjct: 554 GGLHQAL 560
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 GGLHRSL 8
GGLH++L
Sbjct: 554 GGLHQAL 560
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 GGLHRSL 8
GGLH++L
Sbjct: 554 GGLHQAL 560
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 1 PGGLHRSL 8
PG L RSL
Sbjct: 84 PGALIRSL 91
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 PGGLHRSL 8
PG L RSL
Sbjct: 84 PGALIRSL 91
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 GGLHRSL 8
GGLH++L
Sbjct: 554 GGLHQAL 560
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 GGLHRSL 8
GGLH++L
Sbjct: 554 GGLHQAL 560
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 GGLHRSL 8
GGLH++L
Sbjct: 554 GGLHQAL 560
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 GGLHRSL 8
GGLH++L
Sbjct: 554 GGLHQAL 560
12|SequenceR|65|56|ADVQCPGGLH
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 492 AFITCPGDLH 501
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 491 AFITCPGDLH 500
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 491 AFITCPGDLH 500
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 492 AFITCPGDLH 501
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 491 AFITCPGDLH 500
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 491 AFITCPGDLH 500
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VQCPGGLH 10
V CP G+H
Sbjct: 1133 VHCPDGIH 1140
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VQCPGGLH 10
V CP G+H
Sbjct: 1133 VHCPDGIH 1140
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VQCPGGLH 10
V CP G+H
Sbjct: 1133 VHCPDGIH 1140
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VQCPGGLH 10
V CP G+H
Sbjct: 1133 VHCPDGIH 1140
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VQCPGGLH 10
V CP G+H
Sbjct: 1133 VHCPDGIH 1140
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 491 AFLTCPGDLH 500
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 ADVQCPGGLH 10
A + CPG LH
Sbjct: 491 AFLTCPGDLH 500
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 5 CPGGL 9
CPGGL
Sbjct: 147 CPGGL 151
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 5 CPGGL 9
CPGGL
Sbjct: 147 CPGGL 151
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ADVQCP 6
+D+QCP
Sbjct: 64 SDIQCP 69
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ADVQCP 6
+D+QCP
Sbjct: 64 SDIQCP 69
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ADVQCP 6
+D+QCP
Sbjct: 64 SDIQCP 69
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 ADVQCPGG 8
ADV+ PGG
Sbjct: 554 ADVELPGG 561
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 ADVQCPGG 8
ADV+ PGG
Sbjct: 554 ADVELPGG 561
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ADVQCPGGLH 10
AD CPGG +
Sbjct: 1301 ADGGCPGGAY 1310
>sp|ORF32_VZVO|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Oka vaccine)
Query: 5 CPGGLH 10
CPGG H
Sbjct: 89 CPGGRH 94
>sp|ORF32_VZVD|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 CPGGLH 10
CPGG H
Sbjct: 89 CPGGRH 94
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 DVQCPG 7
DVQ PG
Sbjct: 769 DVQTPG 774
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 VQCPGGLH 10
VQC G H
Sbjct: 1677 VQCATGAH 1684
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 2 DVQCP 6
D QCP
Sbjct: 629 DAQCP 633
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 ADVQCPG 7
A V+CPG
Sbjct: 324 AAVKCPG 330
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 ADVQCPG 7
A V+CPG
Sbjct: 324 AAVKCPG 330
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 ADVQCPG 7
A V+CPG
Sbjct: 324 AAVKCPG 330
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 ADVQCPG 7
A V+CPG
Sbjct: 324 AAVKCPG 330
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 CPGGLH 10
CP G H
Sbjct: 204 CPAGWH 209
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 3 VQCPG 7
V+CPG
Sbjct: 738 VRCPG 742
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 DVQCPGG 8
DV C GG
Sbjct: 377 DVVCSGG 383
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 DVQCPGG 8
DV C GG
Sbjct: 377 DVVCSGG 383
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 DVQCPGG 8
DV C GG
Sbjct: 377 DVVCSGG 383
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 DVQCPGG 8
DV C GG
Sbjct: 377 DVVCSGG 383
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VQCPG 7
V+CPG
Sbjct: 1061 VRCPG 1065
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 DVQCPGG 8
DV C GG
Sbjct: 377 DVLCTGG 383
>sp|Y190_ADE07|UNCHARACTERIZED 19.0 kDa early protein|Human adenovirus B serotype 7
Query: 2 DVQCPG 7
++ CPG
Sbjct: 27 EISCPG 32
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ADVQCPGGLH 10
+DV C G H
Sbjct: 280 SDVNCNGYQH 289
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 ADVQCPG 7
A V CPG
Sbjct: 323 AAVTCPG 329
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 5 CPGGLH 10
C GG H
Sbjct: 228 CEGGTH 233
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 DVQCPGG 8
DV+ PGG
Sbjct: 21 DVKFPGG 27
13|SequenceR|70|61|GASCHADVQC
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 GASCHADVQC 10
G CH V C
Sbjct: 5 GCVCHLGVYC 14
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 SCHADVQC 10
SC A +QC
Sbjct: 1003 SCKALMQC 1010
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 SCHADVQC 10
SC A +QC
Sbjct: 994 SCKALMQC 1001
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 SCHADVQC 10
SC A +QC
Sbjct: 995 SCKALMQC 1002
>sp|TRM2_HHV6Z|TRIPARTITE terminase subunit 2|Human herpesvirus 6B (strain Z29)
Query: 5 HADVQC 10
H DV C
Sbjct: 65 HGDVDC 70
>sp|TRM2_HHV6U|TRIPARTITE terminase subunit 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 HADVQC 10
H DV C
Sbjct: 65 HGDVDC 70
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 HADVQC 10
H DV+C
Sbjct: 255 HLDVKC 260
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 HADVQC 10
H DV+C
Sbjct: 255 HLDVKC 260
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 1 GASCHADVQ 9
GA C DV+
Sbjct: 23 GADCPPDVR 31
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 HADVQC 10
H DV C
Sbjct: 136 HTDVSC 141
>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 ASCHADVQC 10
A+C +++C
Sbjct: 79 AACSRNIEC 87
>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 ASCHADVQC 10
A+C +++C
Sbjct: 79 AACSRNIEC 87
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 5 HADVQC 10
H DV C
Sbjct: 136 HTDVSC 141
14|SequenceR|75|66|FICSHGASCH
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 FICSHGASCH 10
F+CS+ A+CH
Sbjct: 817 FVCSNYAACH 826
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 FICSHGASCH 10
F+CS+ A+CH
Sbjct: 817 FVCSNYAACH 826
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 FICSHGASCH 10
F+CS+ A+CH
Sbjct: 821 FVCSNYAACH 830
>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 ICSHGA 7
IC HGA
Sbjct: 174 ICQHGA 179
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 FICSHG 6
+CSHG
Sbjct: 978 LVCSHG 983
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 FICSHG 6
F CSHG
Sbjct: 5047 FCCSHG 5052
Query: 2 ICSHGASCH 10
+CS+ A+C+
Sbjct: 6146 VCSNRATCY 6154
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 FICSHG 6
F CSHG
Sbjct: 5067 FCCSHG 5072
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 FICSHG 6
F CSHG
Sbjct: 5097 FCCSHG 5102
Query: 2 ICSHGASCH 10
+CS+ A+C+
Sbjct: 6196 VCSNRATCY 6204
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 FICSHGASC 9
F+ SH ++C
Sbjct: 228 FVYSHSSNC 236
>sp|ORF24_TTVV4|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 IC-SHGASC 9
+C SHGA C
Sbjct: 21 VCQSHGAFC 29
>sp|ORF23_TTVV4|PROBABLE protein VP2|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 IC-SHGASC 9
+C SHGA C
Sbjct: 21 VCQSHGAFC 29
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FICSHGASC 9
ICS +SC
Sbjct: 336 LICSSCSSC 344
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 3 CSHGASC 9
C H A+C
Sbjct: 339 CVHDAAC 345
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 3 CSHGASC 9
C H A+C
Sbjct: 339 CVHDAAC 345
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 FICSHGASC 9
F C+ G SC
Sbjct: 1313 FSCTSGISC 1321
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 FICSHGASC 9
+ CS G SC
Sbjct: 1456 YACSSGISC 1464
>sp|TRM2_HCMVM|TRIPARTITE terminase subunit 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CSHG 6
CSHG
Sbjct: 120 CSHG 123
>sp|TRM2_HCMVA|TRIPARTITE terminase subunit 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CSHG 6
CSHG
Sbjct: 120 CSHG 123
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 ICSHG 6
IC HG
Sbjct: 169 ICQHG 173
>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 ICSHG 6
IC HG
Sbjct: 168 ICQHG 172
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 ICSHG 6
IC HG
Sbjct: 169 ICQHG 173
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 ICSHG 6
IC HG
Sbjct: 165 ICQHG 169
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 ICSHG 6
IC HG
Sbjct: 169 ICQHG 173
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 ICSHG 6
IC HG
Sbjct: 169 ICQHG 173
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 1 FICSHGASCH 10
F G +CH
Sbjct: 292 FFSKDGIACH 301
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 FICSHGASC 9
F+C A+C
Sbjct: 819 FVCGDYAAC 827
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 FICSHGASC 9
F C HG C
Sbjct: 1043 FKCCHGTDC 1051
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ICSHGASCH 10
+C HG+ H
Sbjct: 15 LCKHGSYTH 23
15|SequenceR|80|71|TGSVTFICSH
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 1 TGSVTFICSH 10
TG VT CSH
Sbjct: 145 TGGVTAACSH 154
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 5 TFICSH 10
TF+C+H
Sbjct: 217 TFVCNH 222
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 2 GSVTFIC 8
GS+T+ C
Sbjct: 363 GSITYTC 369
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TGSVTFICSH 10
TG +F C++
Sbjct: 16 TGKFSFTCAN 25
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TGSVTFICSH 10
TG +F C++
Sbjct: 16 TGKFSFTCAN 25
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 TGSVTFIC 8
TGS+ F C
Sbjct: 1156 TGSMRFSC 1163
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 3 SVTFICS 9
SV+FIC+
Sbjct: 178 SVSFICA 184
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 GSVTFICS 9
SVT +CS
Sbjct: 261 ASVTAVCS 268
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 GSVTFICS 9
SVT +CS
Sbjct: 261 ASVTAVCS 268
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 4 VTFICSH 10
+TF CSH
Sbjct: 516 LTFSCSH 522
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 VTFICSH 10
+TF CSH
Sbjct: 515 LTFSCSH 521
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 GSVTFICS 9
GSVT CS
Sbjct: 451 GSVTHSCS 458
16|SequenceR|85|76|PCCSSTGSVT
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PCCSSTG 7
PC SS+G
Sbjct: 477 PCRSSSG 483
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PCCSSTG 7
PC SS+G
Sbjct: 477 PCRSSSG 483
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 3 CSSTGSVT 10
C++ GS+T
Sbjct: 178 CTAIGSIT 185
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 CCSST 6
CCSST
Sbjct: 298 CCSST 302
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CCSST 6
CCSST
Sbjct: 298 CCSST 302
>sp|VFUS_ORFN2|10 kDa fusion protein|Orf virus (strain NZ2) (OV
Query: 2 CCSSTGS 8
CC TG+
Sbjct: 51 CCRETGN 57
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 PCCSSTGSVT 10
PC + SVT
Sbjct: 684 PCVAIAASVT 693
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 PCCSSTGSVT 10
PC + SVT
Sbjct: 684 PCVAIAASVT 693
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 1 PCCSSTGSVT 10
PC + SVT
Sbjct: 683 PCVAIAASVT 692
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCSSTGSVT 10
PC G+V+
Sbjct: 30 PCAPGVGAVS 39
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 CSSTGSVT 10
C S G+VT
Sbjct: 31 CRSRGTVT 38
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 PCCSSTGSVT 10
P C T SVT
Sbjct: 529 PNCVCTASVT 538
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PCCSSTGSVT 10
P C T SVT
Sbjct: 470 PNCVGTASVT 479
17|SequenceR|90|81|VAEPFPCCSS
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 4 PFPCCSS 10
PFPC S+
Sbjct: 214 PFPCMSN 220
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 EPFPC 7
+PFPC
Sbjct: 262 KPFPC 266
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 EPFPC 7
+PFPC
Sbjct: 262 KPFPC 266
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 2 AEPFPCCSS 10
A+ + CCSS
Sbjct: 337 ADLYECCSS 345
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 6 PCCS 9
PCCS
Sbjct: 552 PCCS 555
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 6 PCCS 9
PCCS
Sbjct: 537 PCCS 540
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 6 PCCSS 10
PCC+S
Sbjct: 4269 PCCTS 4273
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VAEPFPCCS 9
+ PFP C+
Sbjct: 641 IITPFPACT 649
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 VAEPFPCCS 9
+ PFP C+
Sbjct: 641 IITPFPACT 649
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VAEPFPCCS 9
+ PFP C+
Sbjct: 641 IITPFPACT 649
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VAEPFPCC 8
+ PF CC
Sbjct: 5344 IRRPFLCC 5351
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VAEPFPCC 8
+ PF CC
Sbjct: 5321 IRRPFLCC 5328
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 1 VAEPFPCCSS 10
++ P P C+S
Sbjct: 209 ISTPGPVCTS 218
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 VAEPFPCC 8
+ PF CC
Sbjct: 5330 IRRPFLCC 5337
>sp|VE6_HPV48|PROTEIN E6|Human papillomavirus type 48
Query: 4 PFPCCS 9
PF CC+
Sbjct: 56 PFACCT 61
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 VAEPFPC 7
+A+PF C
Sbjct: 210 IADPFNC 216
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 VAEPFPC 7
+A+PF C
Sbjct: 210 IADPFNC 216
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 1 VAEPFPCCS 9
VA P CS
Sbjct: 88 VASPLSACS 96
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 VAEPFPCCS 9
VA P CS
Sbjct: 88 VASPLSACS 96
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 89 IREPFISCS 97
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 VAEPFPCCS 9
VA P CS
Sbjct: 88 VASPLSACS 96
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 117 IREPFISCS 125
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 102 IREPFISCS 110
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 102 IREPFISCS 110
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 1 VAEPFPCCS 9
+ EPF CS
Sbjct: 101 IREPFISCS 109
18|SequenceR|95|86|GDGCAVAEPF
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 GCAVAEPF 10
GCA+ +PF
Sbjct: 1223 GCAILQPF 1230
Query: 1 GDGCAVA 7
GD C VA
Sbjct: 3154 GDDCIVA 3160
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GCAVAEPF 10
GC+VA PF
Sbjct: 636 GCSVAYPF 643
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 GDGCAVAEP 9
GD C VA P
Sbjct: 3172 GDDCVVAAP 3180
>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22
Query: 1 GDGCAVAEPF 10
GD V EPF
Sbjct: 386 GDSSVVQEPF 395
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 CAVAEP 9
CAV+EP
Sbjct: 429 CAVSEP 434
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 GCAVAEP 9
GC AEP
Sbjct: 979 GCGFAEP 985
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2386 GSACRVADPL 2395
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2376 GTACRVADPL 2385
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2403 GTACRVADPL 2412
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2383 GTACRVADPL 2392
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2380 GTACRVADPL 2389
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2317 GTACRVADPL 2326
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2394 GTACRVADPL 2403
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2373 GTACRVADPL 2382
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2373 GTACRVADPL 2382
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2408 GTACRVADPL 2417
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2402 GTACRVADPL 2411
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2402 GTACRVADPL 2411
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2380 GTACRVADPL 2389
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2380 GTACRVADPL 2389
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 1055 GSACRVADPL 1064
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 4 CAVAEP 9
CAV EP
Sbjct: 57 CAVTEP 62
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 4 CAVAEP 9
CAV EP
Sbjct: 252 CAVTEP 257
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2419 GTSCRVADPL 2428
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2419 GTSCRVADPL 2428
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 GDGCAVAEPF 10
G C VA+P
Sbjct: 2420 GTSCRVADPL 2429
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 4 CAVAEPF 10
C V EPF
Sbjct: 382 CLVFEPF 388
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 4 CAVAEPF 10
C V EPF
Sbjct: 382 CLVFEPF 388
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 CAVAEPF 10
C V EPF
Sbjct: 382 CLVFEPF 388
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CAVAEPF 10
C V EPF
Sbjct: 382 CLVFEPF 388
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 4 CAVAEPF 10
C V EPF
Sbjct: 382 CLVFEPF 388
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 4 CAVAEPF 10
C V EPF
Sbjct: 382 CLVFEPF 388
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 4 CAVAEPF 10
C V EPF
Sbjct: 381 CLVFEPF 387
>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41
Query: 3 GCAVAEP 9
GC+ A+P
Sbjct: 134 GCSPAQP 140
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 2 DGCAVAEPF 10
+GC PF
Sbjct: 52 EGCTTLTPF 60
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 1 GDGCAVAEPF 10
G G A EPF
Sbjct: 465 GHGDAEVEPF 474
19|SequenceR|100|91|PCCHHGDGCA
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CCHHGD 7
CC HGD
Sbjct: 5048 CCSHGD 5053
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 CCHHGD 7
CC HGD
Sbjct: 5068 CCSHGD 5073
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CCHHGD 7
CC HGD
Sbjct: 5098 CCSHGD 5103
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 2 CCHHGDGCA 10
CC H GCA
Sbjct: 317 CCVHDAGCA 325
Query: 3 CHHGDGC 9
C+H GC
Sbjct: 378 CNHKPGC 384
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 CCHH 5
CCHH
Sbjct: 190 CCHH 193
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PCCHHGDGC 9
PCC GC
Sbjct: 895 PCCDCTAGC 903
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 2 CCHHGDGCA 10
CC H GC
Sbjct: 293 CCFHDVGCG 301
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 CCHHGD 7
CC H D
Sbjct: 45 CCQHTD 50
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 CCHHGD 7
CC H D
Sbjct: 45 CCQHTD 50
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 3 CHHGDGCA 10
C+H GCA
Sbjct: 384 CNHKPGCA 391
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 CHHG 6
CHHG
Sbjct: 996 CHHG 999
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 CHHG 6
CHHG
Sbjct: 996 CHHG 999
>sp|IORF_CVHOC|PROTEIN I|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CCHHG 6
CCH G
Sbjct: 99 CCHDG 103
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 CCHHGD 7
CC H D
Sbjct: 45 CCQHTD 50
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 CCHHGD 7
CC H D
Sbjct: 45 CCQHTD 50
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 PCCHHGDG 8
PC HG+G
Sbjct: 6355 PCEVHGNG 6362
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 CCHHGD 7
CC H D
Sbjct: 45 CCQHTD 50
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 CCHHGD 7
CC H D
Sbjct: 45 CCQHTD 50
>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCHHG 6
P C HG
Sbjct: 173 PICQHG 178
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCHHG 6
P C HG
Sbjct: 168 PICQHG 173
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PCCHHG 6
PC H G
Sbjct: 210 PCLHQG 215
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PCCHHG 6
PC H G
Sbjct: 210 PCLHQG 215
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PCCHHG 6
PC H G
Sbjct: 211 PCLHQG 216
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 2 CCHHGD 7
CC H D
Sbjct: 45 CCQHTD 50
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCHHG 6
P C HG
Sbjct: 168 PICQHG 173
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 CCHHGD 7
CC H D
Sbjct: 45 CCQHTD 50
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 CCHHGD 7
CC H D
Sbjct: 45 CCQHTD 50
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 CCHHGD 7
CC H D
Sbjct: 45 CCQHTD 50
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 CCHHGD 7
CC H D
Sbjct: 45 CCQHTD 50
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CCHHGD 7
CC H D
Sbjct: 293 CCRHRD 298
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 2 CCHHGD 7
CC H D
Sbjct: 293 CCRHRD 298
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 CCHHGD 7
CC H D
Sbjct: 45 CCQHTD 50
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 CHHGD 7
CH GD
Sbjct: 8 CHQGD 12
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 8 CHQGD 12
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 CHHGD 7
CH GD
Sbjct: 8 CHQGD 12
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 CHHGD 7
CHH D
Sbjct: 927 CHHKD 931
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCAEHGE 357
>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCHHG 6
P C HG
Sbjct: 167 PICQHG 172
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCHHG 6
P C HG
Sbjct: 168 PICQHG 173
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 PCCHHGDG 8
P C GDG
Sbjct: 122 PACSAGDG 129
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 350 PCTEHGE 356
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 350 PCTEHGE 356
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 340 PCAEHGE 346
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 340 PCAEHGE 346
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCHHG 6
P C HG
Sbjct: 168 PICQHG 173
>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCHHG 6
P C HG
Sbjct: 173 PVCQHG 178
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 340 PCAEHGE 346
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PCCHH 5
P CHH
Sbjct: 349 PVCHH 353
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PCCHH 5
P CHH
Sbjct: 349 PVCHH 353
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 1 PCCHHGDGC 9
P CH GC
Sbjct: 198 PFCHLNHGC 206
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCTEHGE 357
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCHHG 6
P C+HG
Sbjct: 173 PACNHG 178
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 346 PCVEHGE 352
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 340 PCAEHGE 346
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCTEHGE 357
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 560 CHRGD 564
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 560 CHRGD 564
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 3 CHHGD 7
CH GD
Sbjct: 560 CHRGD 564
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 3 CHHGD 7
CH GD
Sbjct: 560 CHRGD 564
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 3 CHHGD 7
CH GD
Sbjct: 561 CHRGD 565
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 340 PCTEHGE 346
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCAEHGE 357
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 346 PCTEHGE 352
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 353 PCTEHGE 359
>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCHHG 6
P C HG
Sbjct: 165 PACQHG 170
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 340 PCAEHGE 346
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 CHHGDG 8
CH G+G
Sbjct: 1074 CHMGNG 1079
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCAEHGE 357
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCTEHGE 357
>sp|NEF_HV1V9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCHHG 6
P C HG
Sbjct: 168 PMCQHG 173
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCTEHGE 357
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCTEHGE 357
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 1 PCCHHGDG 8
P C+ GDG
Sbjct: 123 PACNAGDG 130
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCAEHGE 357
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 353 PCADHGE 359
>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCHHG 6
P C HG
Sbjct: 174 PACAHG 179
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 CHHGD 7
CH GD
Sbjct: 58 CHRGD 62
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PCCHHG 6
P C HG
Sbjct: 164 PICQHG 169
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCIEHGE 357
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCTEHGE 357
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 HHGD 7
HHGD
Sbjct: 219 HHGD 222
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 HHGDG 8
HH DG
Sbjct: 307 HHADG 311
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CHHGD 7
CH GD
Sbjct: 68 CHRGD 72
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CHHGD 7
CH GD
Sbjct: 68 CHRGD 72
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 HHGDG 8
HH DG
Sbjct: 307 HHADG 311
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 HHGDG 8
HH DG
Sbjct: 307 HHADG 311
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 353 PCTDHGE 359
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 HGDGC 9
H DGC
Sbjct: 223 HADGC 227
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 4 HHGDG 8
HH DG
Sbjct: 145 HHADG 149
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 PCCHHG 6
PC HG
Sbjct: 350 PCTEHG 355
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 2 CCHHGDG 8
C H G+G
Sbjct: 661 CTHMGNG 667
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 4 HHGDG 8
HH DG
Sbjct: 307 HHADG 311
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 PCCHHG 6
PC HG
Sbjct: 350 PCTEHG 355
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PCCHHGDG 8
PC +GDG
Sbjct: 569 PCNIYGDG 576
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCYEHGE 357
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 PCCHHG 6
PC HG
Sbjct: 350 PCTEHG 355
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 HHGDGC 9
H G GC
Sbjct: 32 HFGSGC 37
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCYEHGE 357
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 PCCHHG 6
PC HG
Sbjct: 350 PCTEHG 355
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCYEHGE 357
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 6 GDGC 9
GDGC
Sbjct: 312 GDGC 315
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 351 PCYEHGE 357
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 1 PCCHHGD 7
PC H G+
Sbjct: 112 PCVHEGN 118
>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 CCHHGDGC 9
C GDGC
Sbjct: 213 CYRDGDGC 220
>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 CCHHGDGC 9
C GDGC
Sbjct: 213 CYRDGDGC 220
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 353 PCDEHGE 359
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 353 PCDEHGE 359
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 PCCHHGD 7
PC HG+
Sbjct: 353 PCDEHGE 359
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 1 PCCHHGD 7
PC H G+
Sbjct: 112 PCVHEGN 118
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 3 CHHGDGCA 10
CH CA
Sbjct: 58 CHQNFNCA 65
20|SequenceR|105|96|CHFGRPCCHH
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 CHFGRPC 7
C GRPC
Sbjct: 581 CVIGRPC 587
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CHFGRPC 7
C GRPC
Sbjct: 581 CVIGRPC 587
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CHFGRPC 7
C GRPC
Sbjct: 581 CVIGRPC 587
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 CHFGRPC 7
C GRPC
Sbjct: 581 CVIGRPC 587
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 CHFGRPCCHH 10
CH G C H+
Sbjct: 8 CHLGVYCVHN 17
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 2 HFGRPCCHH 10
HFG+ C H
Sbjct: 538 HFGKGYCFH 546
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 CHFGRPCCHH 10
C GR C H
Sbjct: 636 CFLGRAACVH 645
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 CHFGRPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 CHFGRPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 CHFGRPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 CHFGRPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HFGRPCCHH 10
H G PC ++
Sbjct: 39 HLGYPCVYY 47
>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HFGRPCCHH 10
H G PC ++
Sbjct: 39 HLGYPCVYY 47
>sp|E316_ADE03|EARLY E3 16 kDa glycoprotein|Human adenovirus B serotype 3
Query: 1 CHFGRPCCHH 10
C+ PCC +
Sbjct: 123 CYLYTPCCAY 132
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 PCCH 9
PCCH
Sbjct: 27 PCCH 30
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 PCCH 9
PCCH
Sbjct: 27 PCCH 30
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 PCCH 9
PCCH
Sbjct: 27 PCCH 30
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 3 FGRPCCHH 10
FG CHH
Sbjct: 136 FGTMWCHH 143
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 FGRPCCHH 10
FG CHH
Sbjct: 136 FGTMWCHH 143
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FGRPCCHH 10
FG CHH
Sbjct: 136 FGTMWCHH 143
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FGRPCCHH 10
FG CHH
Sbjct: 136 FGTMWCHH 143
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 3 FGRPCC 8
FGRP C
Sbjct: 75 FGRPKC 80
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 3 FGRPCCHH 10
FG C HH
Sbjct: 493 FGHLCKHH 500
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 FGRPCCHH 10
FG C HH
Sbjct: 493 FGHLCKHH 500
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 4 GRPCC 8
G PCC
Sbjct: 528 GNPCC 532
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 5 RPCCH 9
R CCH
Sbjct: 471 RQCCH 475
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 4 GRPCC 8
G PCC
Sbjct: 532 GNPCC 536
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 3 FGRPCCH 9
FGR C H
Sbjct: 745 FGRTCPH 751
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 CHFGRP 6
CHFG P
Sbjct: 865 CHFGDP 870
>sp|E321_ADE07|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 7
Query: 3 FGRPC 7
F RPC
Sbjct: 51 FARPC 55
>sp|E321_ADE03|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 3 FGRPC 7
F RPC
Sbjct: 51 FARPC 55
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 CHFGRP 6
CHFG P
Sbjct: 865 CHFGDP 870
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 CHFGRP 6
CHFG P
Sbjct: 866 CHFGDP 871
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 CHFGRP 6
CHFG P
Sbjct: 865 CHFGDP 870
>sp|GLRX2_VARV|GLUTAREDOXIN-2 virus
Query: 3 FGRPCC 8
FG+P C
Sbjct: 8 FGKPYC 13
>sp|GLRX2_VAR67|GLUTAREDOXIN-2 virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 FGRPCC 8
FG+P C
Sbjct: 8 FGKPYC 13
>sp|GLRX2_VACCT|GLUTAREDOXIN-2 virus (strain Tian Tan)
Query: 3 FGRPCC 8
FG+P C
Sbjct: 8 FGKPYC 13
>sp|GLRX2_VACCC|GLUTAREDOXIN-2 virus (strain Copenhagen) (VACV)
Query: 3 FGRPCC 8
FG+P C
Sbjct: 8 FGKPYC 13
>sp|GLRX2_VACCA|GLUTAREDOXIN-2 virus (strain Ankara) (VACV)
Query: 3 FGRPCC 8
FG+P C
Sbjct: 8 FGKPYC 13
>sp|GLRX2_MONPV|GLUTAREDOXIN-2 virus (MPXV)
Query: 3 FGRPCC 8
FG+P C
Sbjct: 8 FGKPYC 13
>sp|GLRX2_CWPXG|GLUTAREDOXIN-2 virus (strain GRI-90 /
Query: 3 FGRPCC 8
FG+P C
Sbjct: 8 FGKPYC 13
>sp|GLRX2_CWPXB|GLUTAREDOXIN-2 virus (strain Brighton Red)
Query: 3 FGRPCC 8
FG+P C
Sbjct: 8 FGKPYC 13
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 HFGRPCC 8
H G CC
Sbjct: 1374 HTGSSCC 1380
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 HFGRPCC 8
H G CC
Sbjct: 1374 HTGSSCC 1380
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 HFGRPCC 8
H G CC
Sbjct: 1374 HTGSSCC 1380
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CHFGRPCCHH 10
C F + C H
Sbjct: 334 CDFLKATCEH 343
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 HFGRPCC 8
H G CC
Sbjct: 1368 HTGASCC 1374
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 HFGRPCC 8
H G CC
Sbjct: 1368 HTGASCC 1374
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 CHFGRPC 7
CH PC
Sbjct: 347 CHHTEPC 353
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CHFGRPCCHH 10
C F + C H
Sbjct: 334 CDFLKATCEH 343
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 4 GRPCCHH 10
G+P HH
Sbjct: 129 GKPFFHH 135
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GRPCCHH 10
G+P HH
Sbjct: 129 GKPFFHH 135
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 CHFGRP 6
C F RP
Sbjct: 230 CQFSRP 235
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 CHFGRP 6
CH G P
Sbjct: 570 CHIGPP 575
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 CHFGRP 6
C F RP
Sbjct: 231 CQFSRP 236
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 GRPCCHH 10
G P HH
Sbjct: 2299 GNPMLHH 2305
21|SequenceR|110|101|RGDASCHFGR
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 4 ASCHFG 9
ASCHFG
Sbjct: 584 ASCHFG 589
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 4 ASCHFG 9
ASCHFG
Sbjct: 584 ASCHFG 589
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 RGDASCH 7
RGD CH
Sbjct: 2021 RGDGICH 2027
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 1 RGDASC 6
RGDA+C
Sbjct: 316 RGDANC 321
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 RGDASCHFGR 10
R DA+C+F R
Sbjct: 643 RLDAACNFTR 652
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 1 RGDASC 6
RGDA+C
Sbjct: 313 RGDANC 318
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 GDASCH 7
GD++CH
Sbjct: 390 GDSNCH 395
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 4 ASCHFG 9
++CHFG
Sbjct: 863 STCHFG 868
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 4 ASCHFG 9
++CHFG
Sbjct: 864 STCHFG 869
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 4 ASCHFG 9
++CHFG
Sbjct: 863 STCHFG 868
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 4 ASCHFG 9
++CHFG
Sbjct: 863 STCHFG 868
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 3 DASCHF 8
++SCHF
Sbjct: 1235 NSSCHF 1240
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 DASCHF 8
++SCHF
Sbjct: 1235 NSSCHF 1240
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DASCHF 8
++SCHF
Sbjct: 1235 NSSCHF 1240
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 DASCHF 8
++SCHF
Sbjct: 1235 NSSCHF 1240
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 3 DASCHF 8
++SCHF
Sbjct: 1235 NSSCHF 1240
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 4 ASCHFGR 10
A C FGR
Sbjct: 49 AHCKFGR 55
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 ASCHFGR 10
A C FGR
Sbjct: 49 AHCKFGR 55
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 ASCHFGR 10
A C FGR
Sbjct: 49 AHCKFGR 55
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 4 ASCHFGR 10
A CHF R
Sbjct: 749 AKCHFER 755
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 RGDASCHFGR 10
R DA+C++ R
Sbjct: 644 RFDAACNWTR 653
Query: 2 GDASCH 7
GD CH
Sbjct: 2026 GDGVCH 2031
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 RGDASCHFGR 10
R DA+C++ R
Sbjct: 644 RFDAACNWTR 653
Query: 2 GDASCH 7
GD CH
Sbjct: 2026 GDGVCH 2031
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 RGDASCHFGR 10
R DA+C++ R
Sbjct: 637 RFDAACNWTR 646
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 RGDASCHF 8
+GD +C F
Sbjct: 221 KGDKTCGF 228
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 4 ASCHFG 9
ASCH G
Sbjct: 219 ASCHQG 224
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 4 ASCHFG 9
ASCH G
Sbjct: 219 ASCHQG 224
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 4 ASCHFG 9
ASCH G
Sbjct: 6 ASCHQG 11
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain
Query: 4 ASCHFG 9
ASCH G
Sbjct: 6 ASCHQG 11
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 4 ASCHFG 9
ASCH G
Sbjct: 6 ASCHQG 11
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 5 SCHF 8
SCHF
Sbjct: 232 SCHF 235
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 DASCHFG 9
DAS +FG
Sbjct: 162 DASIYFG 168
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 GDASCH 7
GD CH
Sbjct: 2025 GDGVCH 2030
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 1 RGDASC 6
+GDA+C
Sbjct: 301 QGDANC 306
22|SequenceR|115|106|RQFCSRGDAS
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 FCSRGDAS 10
FC+RGD S
Sbjct: 196 FCARGDHS 203
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FCSRGDAS 10
FC+RGD S
Sbjct: 196 FCARGDHS 203
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FCSRGDAS 10
FC+RGD S
Sbjct: 196 FCARGDHS 203
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 FCSRG 7
FCSRG
Sbjct: 1667 FCSRG 1671
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 FCSRG 7
FCSRG
Sbjct: 1667 FCSRG 1671
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 RQFCSRGD 8
R FC GD
Sbjct: 51 RNFCVNGD 58
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 CSRGDAS 10
CS+GD +
Sbjct: 1517 CSKGDTT 1523
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 CSRGDAS 10
CS+GD +
Sbjct: 1517 CSKGDTT 1523
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 CSRGDAS 10
CS+GD +
Sbjct: 1517 CSKGDTT 1523
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 2 QFCSRG 7
FC+RG
Sbjct: 182 HFCTRG 187
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 2 QFCSRG 7
FC+RG
Sbjct: 182 HFCTRG 187
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 RQFCSR 6
R+FC+R
Sbjct: 1233 REFCAR 1238
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 3 FCSRGDAS 10
FC +GD +
Sbjct: 466 FCIKGDKT 473
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 3 FCSRGDAS 10
FC+ GD++
Sbjct: 16 FCTSGDSA 23
>sp|ORF2_TTVV3|ORF2 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 3 FCSRGD 8
FCS GD
Sbjct: 27 FCSCGD 32
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RQFCSRGDAS 10
R F S GD S
Sbjct: 1664 RDFLSCGDGS 1673
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RQFCSRGDAS 10
R F S GD S
Sbjct: 1664 RDFLSCGDGS 1673
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RQFCSRGDAS 10
R F S GD S
Sbjct: 1664 RDFLSCGDGS 1673
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RQFCSRGDAS 10
R F S GD S
Sbjct: 1664 RDFLSCGDGS 1673
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RQFCSRGDAS 10
R F S GD S
Sbjct: 1664 RDFLSCGDGS 1673
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 FCSRGD 8
FC +GD
Sbjct: 1187 FCMQGD 1192
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 QFCSRGDA 9
+FC GD+
Sbjct: 198 EFCLAGDS 205
>sp|Y215_ADE02|UNCHARACTERIZED protein F-215|Human adenovirus C serotype 2
Query: 1 RQFCSRGDAS 10
R+FC+R ++
Sbjct: 65 RRFCARPPST 74
23|SequenceR|120|111|SNNGSRQFCS
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 NNGSRQFCS 10
NNG +FCS
Sbjct: 5171 NNGPHEFCS 5179
Query: 3 NGSRQFCS 10
NG FCS
Sbjct: 2427 NGGTGFCS 2434
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 NGSRQFCS 10
NG +FCS
Sbjct: 5210 NGPHEFCS 5217
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 NGSRQFCS 10
NG +FCS
Sbjct: 5230 NGPHEFCS 5237
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 NGSRQFCS 10
NG +FCS
Sbjct: 5260 NGPHEFCS 5267
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 3 NGSRQF 8
NGSR+F
Sbjct: 136 NGSREF 141
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 NGSRQFC 9
NG R FC
Sbjct: 2416 NGGRGFC 2422
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 SNNGSRQF 8
SNNG R++
Sbjct: 201 SNNGQRRW 208
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 NGSRQFC 9
NG R FC
Sbjct: 2416 NGGRGFC 2422
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 1 SNNGSRQFCS 10
SNN R+ CS
Sbjct: 278 SNNKRRKVCS 287
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 1 SNNGSR 6
SNNG+R
Sbjct: 470 SNNGTR 475
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 NNGSRQFC 9
N+G+ +FC
Sbjct: 3092 NDGTVEFC 3099
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 1 SNNGSR 6
SNNG+R
Sbjct: 470 SNNGTR 475
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SNNGSR 6
SNNG+R
Sbjct: 470 SNNGTR 475
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SNNGSR 6
SNNG+R
Sbjct: 470 SNNGTR 475
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 SNNGSR 6
SNNG R
Sbjct: 273 SNNGQR 278
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 SNNGSR 6
SNNG R
Sbjct: 274 SNNGQR 279
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 SNNGSR 6
SNNG R
Sbjct: 274 SNNGQR 279
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 SNNGSR 6
SNNG R
Sbjct: 274 SNNGQR 279
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SNNGSR 6
SNNG+R
Sbjct: 470 SNNGTR 475
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 1 SNNGSR 6
SNNG+R
Sbjct: 470 SNNGTR 475
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 NNGSRQFC 9
N+G+ +FC
Sbjct: 3092 NDGTVEFC 3099
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 NGSRQFCS 10
NG FCS
Sbjct: 2427 NGGTGFCS 2434
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 2 NNGSRQFCS 10
NN R+ CS
Sbjct: 81 NNKRRKLCS 89
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 1 SNNGSRQFC 9
SN+ R+FC
Sbjct: 2 SNSTVRRFC 10
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 2 NNGSRQFCS 10
NN R+ CS
Sbjct: 275 NNKRRKLCS 283
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 NGSRQFC 9
NG +FC
Sbjct: 2188 NGGSKFC 2194
24|SequenceR|125|116|QIAGVSNNGS
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 QIAGVSNNG 9
+++GV+NNG
Sbjct: 526 ELSGVTNNG 534
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 QIAGVSNNGS 10
QIAG NGS
Sbjct: 2039 QIAGHVKNGS 2048
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QIAGVSNNGS 10
QIAG NGS
Sbjct: 2034 QIAGHVKNGS 2043
Query: 4 GVSNNG 9
G+SNNG
Sbjct: 1366 GLSNNG 1371
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IAGVSNNGS 10
+AGV+ +GS
Sbjct: 115 VAGVAADGS 123
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IAGVSNNGS 10
+AGV+ +GS
Sbjct: 115 VAGVAADGS 123
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 IAGVSNNGS 10
+AG N GS
Sbjct: 617 MAGTENRGS 625
25|SequenceR|130|121|QSDPCQIAGV
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 QSDPCQIAG 9
Q DP +IAG
Sbjct: 1337 QIDPNRIAG 1345
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 QSDPCQIAGV 10
+SDP Q G+
Sbjct: 282 KSDPSQGGGI 291
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 QSDPCQIAGV 10
+SDP Q G+
Sbjct: 282 KSDPSQGGGI 291
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 QSDPCQIAGV 10
+SDP Q G+
Sbjct: 282 KSDPSQGGGI 291
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 QSDPCQIAGV 10
+SDP Q G+
Sbjct: 282 KSDPSQGGGI 291
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 QSDPCQIAGV 10
+SDP Q G+
Sbjct: 282 KSDPSQGGGI 291
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 QSDPCQIAGV 10
+SDP Q G+
Sbjct: 282 KSDPSQGGGI 291
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 QSDPCQIAGV 10
+SDP Q G+
Sbjct: 282 KSDPSQGGGI 291
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 QSDPCQIAGV 10
+SDP Q G+
Sbjct: 282 KSDPSQGGGI 291
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 QSDPCQI 7
Q DPC +
Sbjct: 445 QGDPCPL 451
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PCQIAG 9
PC IAG
Sbjct: 391 PCAIAG 396
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 QSDPCQIAG 9
Q DP ++AG
Sbjct: 1353 QLDPKRVAG 1361
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 QSDPCQIAGV 10
Q PC +GV
Sbjct: 197 QGVPCNASGV 206
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PCQIAG 9
PC IAG
Sbjct: 391 PCAIAG 396
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 DPCQIAG 9
+P Q+AG
Sbjct: 768 EPAQVAG 774
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 DPCQIAG 9
+P Q+AG
Sbjct: 768 EPAQVAG 774
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 2 SDPCQI 7
SDPC I
Sbjct: 105 SDPCAI 110
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 2 SDPCQI 7
SDPC I
Sbjct: 103 SDPCAI 108
26|SequenceR|135|126|DPCEFQSDPC
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 PCEFQSDPC 10
P E + +PC
Sbjct: 1050 PLEVRREPC 1058
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 PCEFQSDPC 10
P E + +PC
Sbjct: 1050 PLEVRREPC 1058
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 2 PCEFQSDP 9
PC+ S+P
Sbjct: 243 PCKLLSEP 250
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 3 CEFQSDP 9
C F +DP
Sbjct: 572 CSFYADP 578
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 CEFQSDP 9
C F +DP
Sbjct: 574 CSFYADP 580
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 2 PCEFQ 6
PCEF+
Sbjct: 136 PCEFR 140
>sp|REV_HV190|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 5 FQSDPC 10
+QS+PC
Sbjct: 23 YQSNPC 28
27|SequenceR|140|131|CCTSFDPCEF
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 2 CTSFDPCEF 10
CTSF C F
Sbjct: 879 CTSFLTCPF 887
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 4 SFDPCEF 10
SFDP EF
Sbjct: 842 SFDPAEF 848
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 CCTSFDPCEF 10
CCT P E+
Sbjct: 1376 CCTRHVPSEY 1385
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 CCTSFDPCEF 10
CCT P E+
Sbjct: 1376 CCTRHVPSEY 1385
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 CCTSFDPCEF 10
CCT P E+
Sbjct: 1376 CCTRHVPSEY 1385
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 CCTSFDPCEF 10
CCT P E+
Sbjct: 1376 CCTRHVPSEY 1385
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 CCTSFDPCEF 10
CCT P E+
Sbjct: 1376 CCTRHVPSEY 1385
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 TSFDPCEF 10
+SFDP +F
Sbjct: 444 SSFDPIKF 451
>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)
Query: 4 SFDPCEF 10
SF PCE
Sbjct: 45 SFTPCEL 51
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 CCTSFDP 7
CC + DP
Sbjct: 208 CCQAVDP 214
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 2 CTSFDPCE 9
C S DP E
Sbjct: 131 CQSIDPWE 138
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 CTSFDPC 8
CTS PC
Sbjct: 16 CTSLSPC 22
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CTSFDPC 8
CTS PC
Sbjct: 16 CTSLSPC 22
>sp|UL140_HCMVM|PROTEIN UL140|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CCTSFD 6
CC FD
Sbjct: 65 CCDRFD 70
>sp|VPR_HV2D1|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 5 FDPC 8
FDPC
Sbjct: 39 FDPC 42
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 CCTSFDPCEF 10
C T PC
Sbjct: 2355 CWTQITPCSL 2364
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CCTSFDPCEF 10
CC F CE+
Sbjct: 340 CCFVFTFCEY 349
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CCTSFDPCEF 10
CC F CE+
Sbjct: 340 CCFVFTFCEY 349
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 CCTSFDPC 8
CC D C
Sbjct: 409 CCNWLDRC 416
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CCTSFDPCEF 10
CC F CE+
Sbjct: 340 CCFVFTFCEY 349
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 3 TSFDPCEF 10
T+FD C F
Sbjct: 679 TAFDYCPF 686
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CCTSFDPCEF 10
C T F P F
Sbjct: 515 CLTDFGPSGF 524
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 CCTSFDPCEF 10
C T F P F
Sbjct: 515 CLTDFGPSGF 524
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 CCTSFDPC 8
C T PC
Sbjct: 395 CSTGLTPC 402
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 CCTSFDPC 8
C T PC
Sbjct: 395 CSTGLTPC 402
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 CCTSFDPC 8
C T PC
Sbjct: 395 CSTGLTPC 402
28|SequenceR|145|136|GDVMVCCTSF
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1435 GDVVVCAT 1442
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1438 GDVVVCAT 1445
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1430 GDVVVCAT 1437
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1434 GDVVVCAT 1441
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1432 GDVVVCAT 1439
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1436 GDVVVCAT 1443
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1436 GDVVVCAT 1443
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1428 GDVVVCAT 1435
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1431 GDVVVCAT 1438
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GDVMVCCTSF 10
G V +CCT F
Sbjct: 70 GTVFLCCTGF 79
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GDVMVCCTSF 10
G V +CCT F
Sbjct: 70 GTVFLCCTGF 79
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1431 GDVVVCST 1438
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1434 GDVVVCAT 1441
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1435 GDVVVCAT 1442
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GDVMVCCT 8
GDV+VC T
Sbjct: 1431 GDVVVCST 1438
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GDVMVCCT 8
GDV++C T
Sbjct: 1435 GDVVICAT 1442
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 MVCCTSF 10
MV C+SF
Sbjct: 1620 MVVCSSF 1626
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 6 CCTSF 10
CCT F
Sbjct: 1435 CCTEF 1439
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 6 CCTSF 10
CCT F
Sbjct: 1349 CCTEF 1353
>sp|PG176_VACCC|PROTEIN OPG176|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 MVCCTS 9
M+CC S
Sbjct: 153 MICCDS 158
>sp|PG176_MONPV|PROTEIN OPG176|Monkeypox virus (MPXV)
Query: 4 MVCCTS 9
M+CC S
Sbjct: 153 MICCDS 158
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 3 VMVCCTSF 10
+ V CTSF
Sbjct: 875 IRVLCTSF 882
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 MVCCTS 9
M CC+S
Sbjct: 296 MFCCSS 301
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 MVCCTS 9
M CC+S
Sbjct: 296 MFCCSS 301
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 2 DVMVCCTSF 10
D ++C TSF
Sbjct: 37 DSLMCDTSF 45
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 DVMVCCT 8
D + CCT
Sbjct: 270 DDLTCCT 276
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 DVMVCCT 8
D + CCT
Sbjct: 270 DDLTCCT 276
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 GDVMVCCTSF 10
GD+M T+F
Sbjct: 329 GDIMYLGTTF 338
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 GDVMVC 6
GD+++C
Sbjct: 133 GDIIIC 138
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GDVMVC 6
GD+++C
Sbjct: 141 GDIIIC 146
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 GDVMVC 6
GD+++C
Sbjct: 141 GDIIIC 146
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 1 GDVMVC 6
GDV VC
Sbjct: 63 GDVHVC 68
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 1 GDVMVCCT 8
GDV CT
Sbjct: 113 GDVCAVCT 120
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 DVMVCCT 8
D + CCT
Sbjct: 261 DDLTCCT 267
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 5 VCCTSF 10
V CTSF
Sbjct: 869 VLCTSF 874
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 5 VCCTSF 10
V CTSF
Sbjct: 866 VLCTSF 871
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 GDVMVCCTSF 10
GD CT+F
Sbjct: 68 GDCTPWCTAF 77
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 DVMVCC 7
DV+ CC
Sbjct: 892 DVIPCC 897
29|SequenceR|150|141|CCGWSGDVMV
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 4 WSGDVMV 10
WSGD +V
Sbjct: 2053 WSGDTLV 2059
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 CGWSGDVM 9
CGW+G +M
Sbjct: 91 CGWAGWLM 98
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CGWSG 6
CGW+G
Sbjct: 84 CGWNG 88
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CCGWSGDVMV 10
CC S DV++
Sbjct: 103 CCNISHDVVI 112
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CCGWSGDVMV 10
CC S DV++
Sbjct: 103 CCNISHDVVI 112
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 CGWS 5
CGWS
Sbjct: 1140 CGWS 1143
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 CGWS 5
CGWS
Sbjct: 1139 CGWS 1142
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 CGWS 5
CGWS
Sbjct: 1138 CGWS 1141
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 CGWS 5
CGWS
Sbjct: 1159 CGWS 1162
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 CCGWS 5
CC WS
Sbjct: 912 CCFWS 916
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 CCGWS 5
CC WS
Sbjct: 912 CCFWS 916
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 354 CFWRGDLV 361
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 354 CFWRGDLV 361
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 354 CFWRGDLV 361
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 354 CFWRGDLV 361
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 354 CFWRGDLV 361
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 354 CFWRGDLV 361
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 354 CFWRGDLV 361
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 354 CFWRGDLV 361
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 333 CFWRGDLV 340
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 354 CFWRGDLV 361
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 354 CFWRGDLV 361
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CGWSGDVM 9
C W GD++
Sbjct: 354 CFWRGDLV 361
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 4 WSGDVM 9
WS DVM
Sbjct: 491 WSPDVM 496
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CGWSGD 7
CGW G+
Sbjct: 196 CGWEGE 201
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CGWSGD 7
CGW G+
Sbjct: 196 CGWEGE 201
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 CCGWSGDV 8
CC +SG++
Sbjct: 1384 CCLYSGNM 1391
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 4 WSGDVMV 10
WSGD V
Sbjct: 2053 WSGDTPV 2059
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 3 GWSGDVMV 10
W+GD+ +
Sbjct: 231 AWAGDLFI 238
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 CGWSG 6
CGW G
Sbjct: 91 CGWMG 95
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 2 CGWSGDV 8
CG +GDV
Sbjct: 491 CGHNGDV 497
>sp|GG_HHV11|ENVELOPE glycoprotein G|Human herpesvirus 1 (strain 17)
Query: 1 CCGWS 5
C GWS
Sbjct: 214 CGGWS 218
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 CGWSG 6
CGW+
Sbjct: 330 CGWAA 334
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 CCGWSGDVM 9
C G+S DV+
Sbjct: 105 CKGFSSDVL 113
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 WSGDVMV 10
W DV+V
Sbjct: 900 WQSDVLV 906
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GWSGDVMV 10
GW DV++
Sbjct: 46 GWREDVLM 53
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GWSGDVMV 10
GW DV++
Sbjct: 46 GWREDVLM 53
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 CCGWS 5
C GWS
Sbjct: 173 CVGWS 177
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 CCGWS 5
C GWS
Sbjct: 173 CVGWS 177
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 1 CCGWSGDV 8
CC W +
Sbjct: 445 CCIWENKI 452
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 CCGWSG 6
C GW G
Sbjct: 1111 CRGWQG 1116
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 CCGWSG 6
C GW G
Sbjct: 1111 CRGWQG 1116
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 CCGWSG 6
C GW G
Sbjct: 1111 CRGWQG 1116
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 CCGWSG 6
C GW G
Sbjct: 1111 CRGWQG 1116
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 CCGWSG 6
C GW G
Sbjct: 1111 CRGWQG 1116
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 CCGWSG 6
C GW G
Sbjct: 1111 CRGWQG 1116
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 CCGWSG 6
C GW G
Sbjct: 1111 CRGWQG 1116
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 CCGWSG 6
C GW G
Sbjct: 1111 CRGWQG 1116
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 CGWSG 6
CGW+G
Sbjct: 91 CGWAG 95
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 CCGWS 5
C GWS
Sbjct: 175 CVGWS 179
30|SequenceR|155|146|AQPMPCCGWS
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 4 MPCCGW 9
M CCGW
Sbjct: 12 MGCCGW 17
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3250 ARVSPGCGWS 3259
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3250 ARVSPGCGWS 3259
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3250 ARVSPGCGWS 3259
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3251 ARVSPGCGWS 3260
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3250 ARVSPGCGWS 3259
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3252 ARVSPGCGWS 3261
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3252 ARVSPGCGWS 3261
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3250 ARISPGCGWS 3259
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 AQPMPCCGWS 10
A+ P CGWS
Sbjct: 3250 ARISPGCGWS 3259
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 5 PCCG 8
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 5 PCCG 8
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 PCCG 8
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 PCCG 8
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 PCCG 8
PCCG
Sbjct: 208 PCCG 211
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 PCCGW 9
PC GW
Sbjct: 13 PCYGW 17
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 5 PCCGW 9
PC GW
Sbjct: 13 PCYGW 17
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 6 CCGWS 10
CC WS
Sbjct: 912 CCFWS 916
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 6 CCGWS 10
CC WS
Sbjct: 912 CCFWS 916
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 5 PCCGWS 10
PC WS
Sbjct: 359 PCSDWS 364
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 PCCGWS 10
PC WS
Sbjct: 359 PCSDWS 364
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 QPMPCCGWS 10
+PMP C +S
Sbjct: 107 RPMPGCMYS 115
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 QPMPC 6
QP PC
Sbjct: 110 QPRPC 114
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 4 MPCCGW 9
MP GW
Sbjct: 51 MPSVGW 56
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 4 MPCCGW 9
MP C W
Sbjct: 281 MPWCMW 286
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 4 MPCCGW 9
MP C W
Sbjct: 281 MPWCMW 286
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 4 MPCCGW 9
MP C W
Sbjct: 281 MPWCMW 286
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 CCGW 9
CCGW
Sbjct: 343 CCGW 346
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 CCGW 9
CCGW
Sbjct: 343 CCGW 346
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 CCGW 9
CCGW
Sbjct: 343 CCGW 346
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 5 PCCGW 9
P CGW
Sbjct: 2855 PLCGW 2859
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 CCGW 9
CCGW
Sbjct: 343 CCGW 346
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 1 AQPMPCCGWS 10
AQP+ G+S
Sbjct: 65 AQPVDVAGYS 74
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 AQPMPCCG 8
A PM CG
Sbjct: 1402 AGPMAACG 1409
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 4 MPCCGW 9
M C GW
Sbjct: 12 MGCTGW 17
31|SequenceR|160|151|DECCSAQPMP
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 CSAQPM 9
C AQPM
Sbjct: 81 CQAQPM 86
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 DECCSAQPMP 10
D CS PMP
Sbjct: 1713 DSDCSIPPMP 1722
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 DECCSAQPMP 10
D CS PMP
Sbjct: 1714 DSDCSIPPMP 1723
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 CCSAQPMP 10
CC A MP
Sbjct: 1089 CCRACTMP 1096
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 CCSAQPMP 10
CC A MP
Sbjct: 1089 CCRACTMP 1096
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 CCSAQPMP 10
CC A MP
Sbjct: 1089 CCRACTMP 1096
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 CCSAQPMP 10
CC A MP
Sbjct: 1089 CCRACTMP 1096
>sp|VE6_HPV22|PROTEIN E6|Human papillomavirus 22
Query: 1 DECCSAQPM 9
D CCS QP
Sbjct: 139 DICCSNQPF 147
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 ECCSAQPMP 10
+CC+ +P P
Sbjct: 2671 QCCNLEPEP 2679
Query: 4 CSAQPMP 10
CS PMP
Sbjct: 683 CSFTPMP 689
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CSAQPMP 10
C A P+P
Sbjct: 81 CQANPIP 87
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CSAQPMP 10
C A P+P
Sbjct: 81 CQANPIP 87
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CSAQPMP 10
C A P+P
Sbjct: 81 CQANPIP 87
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 DECCSAQPMP 10
D CC MP
Sbjct: 1097 DWCCKNCTMP 1106
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 CSAQPM 9
C AQP+
Sbjct: 81 CQAQPL 86
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 2 ECCSAQPMP 10
+C S +P+P
Sbjct: 87 QCVSVRPVP 95
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 CSAQPMP 10
CS PMP
Sbjct: 683 CSFTPMP 689
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 DECCS 5
D CCS
Sbjct: 1638 DTCCS 1642
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 ECCSA 6
ECC+A
Sbjct: 1097 ECCNA 1101
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 CCSAQPMP 10
CS+ P+P
Sbjct: 1634 VCSSTPLP 1641
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 2 ECCSA 6
ECCSA
Sbjct: 13 ECCSA 17
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 CCSAQPMP 10
CS+ P+P
Sbjct: 1634 VCSSTPLP 1641
32|SequenceR|165|156|CCHVRDECCS
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 HVRDECC 9
HVRD CC
Sbjct: 1423 HVRDNCC 1429
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 3 HVRDECC 9
H+ DECC
Sbjct: 1366 HIEDECC 1372
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 HVRDECC 9
HV+D CC
Sbjct: 1423 HVKDNCC 1429
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 CHVRDEC 8
CH+R EC
Sbjct: 2972 CHLRGEC 2978
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 5 RDECC 9
RD+CC
Sbjct: 211 RDDCC 215
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 CCHVRDE 7
CC+ +DE
Sbjct: 166 CCYKKDE 172
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 HVRDECC 9
HV +CC
Sbjct: 1364 HVETDCC 1370
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 HVRDECC 9
HV +CC
Sbjct: 1364 HVETDCC 1370
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 HVRDECC 9
HV +CC
Sbjct: 1364 HVETDCC 1370
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 VRDECC 9
+RD CC
Sbjct: 1095 IRDWCC 1100
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 HVRDECCS 10
H+R EC S
Sbjct: 2963 HLRGECQS 2970
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 HVRDECCS 10
H+R EC S
Sbjct: 2963 HLRGECQS 2970
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 HVRDECCS 10
H+R EC S
Sbjct: 2959 HLRGECHS 2966
>sp|E411_ADE12|PROBABLE early E4 11 kDa|Human adenovirus A serotype 12
Query: 2 CHVRD 6
CH+RD
Sbjct: 101 CHLRD 105
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 CHVRDEC 8
CH +++C
Sbjct: 1402 CHSKEKC 1408
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 HVRDEC 8
H+R EC
Sbjct: 2972 HLRGEC 2977
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 HVRDEC 8
H+R EC
Sbjct: 2969 HLRGEC 2974
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 HVRDEC 8
H+R EC
Sbjct: 2972 HLRGEC 2977
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 HVRDEC 8
H+R EC
Sbjct: 2971 HLRGEC 2976
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 HVRDEC 8
H+R EC
Sbjct: 2971 HLRGEC 2976
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 HVRDEC 8
H+R EC
Sbjct: 2971 HLRGEC 2976
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 HVRDEC 8
H+R EC
Sbjct: 2971 HLRGEC 2976
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 1 CCHVRDECCS 10
CC EC S
Sbjct: 277 CCSFDIECLS 286
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 CCHVRDEC 8
CC+ D C
Sbjct: 409 CCNWLDRC 416
>sp|E316_ADE03|EARLY E3 16 kDa glycoprotein|Human adenovirus B serotype 3
Query: 2 CHVRDECCS 10
C++ CC+
Sbjct: 123 CYLYTPCCA 131
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 3 HVRDECC 9
H+R E C
Sbjct: 449 HIRGEAC 455
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 2 CHVRDEC 8
CHV EC
Sbjct: 274 CHVVSEC 280
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 4 VRDECCS 10
VR+EC S
Sbjct: 166 VREECSS 172
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CCHVRD 6
CC RD
Sbjct: 5023 CCTTRD 5028
33|SequenceR|170|161|FAGHPCCHVR
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GHPCCHV 9
+PCCHV
Sbjct: 25 AYPCCHV 31
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GHPCCHV 9
+PCCHV
Sbjct: 25 AYPCCHV 31
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GHPCCHV 9
+PCCHV
Sbjct: 25 AYPCCHV 31
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FAGHPCCHVR 10
FAGH C VR
Sbjct: 558 FAGHLKCKVR 567
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FAGHPCCHVR 10
FAGH C VR
Sbjct: 558 FAGHLKCKVR 567
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FAGHPCCHVR 10
FAGH C VR
Sbjct: 558 FAGHLKCKVR 567
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FAGHPCCHVR 10
FAGH C VR
Sbjct: 558 FAGHLKCKVR 567
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FAGHPCCHVR 10
FAGH C VR
Sbjct: 558 FAGHLKCKVR 567
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 3 GHPCC 7
G+PCC
Sbjct: 528 GNPCC 532
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 3 GHPCC 7
G+PCC
Sbjct: 532 GNPCC 536
>sp|A40_VACCC|PROTEIN A40|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FAGHPCC 7
+AG+ CC
Sbjct: 8 YAGYACC 14
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 3 GHPCCHVR 10
GH CC R
Sbjct: 161 GHECCARR 168
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 3 GHPCCHVR 10
GH CC R
Sbjct: 161 GHECCARR 168
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 GHPC 6
GHPC
Sbjct: 167 GHPC 170
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 1 FAGHPCCHV 9
+ GH CHV
Sbjct: 268 YYGHSKCHV 276
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 FAGHPCCHV 9
+ G+P C V
Sbjct: 1766 YKGNPACQV 1774
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FAGHPCCH 8
HP CH
Sbjct: 249 LTSHPICH 256
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 GHPCC 7
GH CC
Sbjct: 436 GHYCC 440
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 3 GHPCC 7
GH CC
Sbjct: 447 GHYCC 451
>sp|A40_VAR67|PROTEIN A40 homolog|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 FAGHPCC 7
+AG+ CC
Sbjct: 10 YAGYACC 16
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 3 GHPCCHVR 10
GHP C ++
Sbjct: 46 GHPYCSLQ 53
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 FAGHPCC 7
F G CC
Sbjct: 4321 FGGASCC 4327
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 FAGHPCC 7
F G CC
Sbjct: 4298 FGGASCC 4304
Query: 1 FAGHPCC 7
F G+ CC
Sbjct: 3762 FLGYCCC 3768
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FAGHPCCHV 9
+AGH C V
Sbjct: 43 YAGHRCLTV 51
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 FAGHPCC 7
F G CC
Sbjct: 4321 FGGASCC 4327
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FAGHPCCHV 9
+AGH C V
Sbjct: 43 YAGHRCLTV 51
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FAGHPCCHV 9
+AGH C V
Sbjct: 43 YAGHRCLTV 51
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 3 GHPCCHVR 10
GHP C ++
Sbjct: 46 GHPYCTLQ 53
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 FAGHPCC 7
F G CC
Sbjct: 4298 FGGASCC 4304
Query: 1 FAGHPCC 7
F G+ CC
Sbjct: 3762 FLGYCCC 3768
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 AGHPCCHVR 10
A P CH++
Sbjct: 1186 ASCPKCHIK 1194
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 AGHPCCHVR 10
A P CH++
Sbjct: 1184 ASCPKCHIK 1192
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 2 AGHPCCHVR 10
+G+P H+R
Sbjct: 565 SGNPFAHLR 573
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 2 AGHPCCHVR 10
+G+P H+R
Sbjct: 570 SGNPFAHLR 578
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 2 AGHPCCHVR 10
+G+P H+R
Sbjct: 570 SGNPFAHLR 578
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 GHPCCHV 9
G P CH+
Sbjct: 566 GAPPCHI 572
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 GHPCCHV 9
G P CH+
Sbjct: 566 GAPPCHI 572
>sp|UORF_ZIKV|UORF protein|Zika virus (ZIKV)
Query: 6 CCHV 9
CCHV
Sbjct: 98 CCHV 101
34|SequenceR|175|166|HVLDCFAGHP
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 585 DCFRKHP 591
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 586 DCFRKHP 592
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 582 DCFRKHP 588
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 590 DCFRKHP 596
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 589 DCFRKHP 595
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 589 DCFRKHP 595
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 589 DCFRKHP 595
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 590 DCFRKHP 596
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 585 DCFRKHP 591
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 585 DCFRKHP 591
Query: 2 VLDCF 6
+LDCF
Sbjct: 2253 ILDCF 2257
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 588 DCFRKHP 594
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRRHP 590
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 4 DCFAGHP 10
DCF HP
Sbjct: 584 DCFRKHP 590
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 VLDCFAGH 9
V+DC A H
Sbjct: 286 VIDCMAKH 293
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 HVLDC 5
HVLDC
Sbjct: 4676 HVLDC 4680
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 HVLDC 5
HVLDC
Sbjct: 4656 HVLDC 4660
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 HVLDC 5
HVLDC
Sbjct: 4706 HVLDC 4710
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 VLDCFA 7
V+DCFA
Sbjct: 142 VVDCFA 147
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 1 HVLDCFAGH 9
H+LD F G+
Sbjct: 236 HILDLFYGN 244
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 1 HVLDCFAGH 9
H+LD F G+
Sbjct: 236 HILDLFYGN 244
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 VLDCFAGHP 10
VL C+ G P
Sbjct: 3364 VLACYNGRP 3372
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 VLDCFAGHP 10
VL C+ G P
Sbjct: 3364 VLACYNGRP 3372
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 VLDCFAGHP 10
VL C+ G P
Sbjct: 3377 VLACYNGSP 3385
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 VLDCFAGHP 10
VL C+ G P
Sbjct: 3354 VLACYNGSP 3362
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VLDCFAGHP 10
VL C+ G P
Sbjct: 3377 VLACYNGSP 3385
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VLDCFAGHP 10
VL C+ G P
Sbjct: 3354 VLACYNGSP 3362
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 VLDCFAGHP 10
V CF G+P
Sbjct: 2186 VPKCFMGNP 2194
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 VLDCFAGHP 10
V CF G+P
Sbjct: 2186 VPKCFMGNP 2194
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 2 VLDCF 6
+LDCF
Sbjct: 15 ILDCF 19
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 1 HVLDCFAGHP 10
H+L ++ HP
Sbjct: 367 HILHRYSKHP 376
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 HVLDCFAGHP 10
++LD F G P
Sbjct: 49 YLLDKFKGKP 58
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 2 VLDCF 6
+LDCF
Sbjct: 15 ILDCF 19
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 4 DCFAGHP 10
+C A HP
Sbjct: 300 ECLAAHP 306
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 HVLDC 5
HV+DC
Sbjct: 1981 HVVDC 1985
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 HVLDC 5
HV+DC
Sbjct: 1981 HVVDC 1985
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 2 VLDCFAGHP 10
V+ C AG P
Sbjct: 15 VVSCLAGTP 23
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 2 VLDCFAGHP 10
V+ C AG P
Sbjct: 15 VVSCLAGTP 23
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 4 DCFAGH 9
DC AGH
Sbjct: 354 DCGAGH 359
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 4 DCFAGH 9
DC AGH
Sbjct: 354 DCGAGH 359
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 HVLDCFAGH 9
H DC GH
Sbjct: 343 HCPDCGEGH 351
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 2 VLDCFAGH 9
++D F GH
Sbjct: 5 IVDLFNGH 12
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 HVLDCFAGH 9
H DC GH
Sbjct: 342 HCPDCGEGH 350
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 HVLDCFAGH 9
H DC GH
Sbjct: 342 HCPDCGEGH 350
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 HVLDCFAGH 9
H DC GH
Sbjct: 342 HCPDCGEGH 350
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 VLDCFAG 8
VL CF G
Sbjct: 890 VLTCFRG 896
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 VLDCFAG 8
VL CF G
Sbjct: 891 VLTCFRG 897
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 VLDCFAG 8
VL CF G
Sbjct: 891 VLTCFRG 897
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 VLDCFAG 8
VL CF G
Sbjct: 891 VLTCFRG 897
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 VLDCFAG 8
VL CF G
Sbjct: 890 VLTCFRG 896
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 VLDCFAG 8
VL CF G
Sbjct: 891 VLTCFRG 897
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 VLDCFAG 8
VL CF G
Sbjct: 891 VLTCFRG 897
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 HVLDCFAGHP 10
HV+ F G P
Sbjct: 426 HVVPGFEGRP 435
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HVLDC 5
H LDC
Sbjct: 4618 HALDC 4622
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 HVLDCFAGH 9
H DC GH
Sbjct: 343 HCPDCGEGH 351
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 HVLDCFAGHP 10
HV+ F G P
Sbjct: 426 HVVPGFEGRP 435
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 VLDCFAG 8
VL CF G
Sbjct: 892 VLTCFRG 898
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 HVLDCFAGHP 10
HV+ F G P
Sbjct: 426 HVVPGFEGRP 435
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 HVLDCFAGH 9
H DC GH
Sbjct: 343 HCPDCGEGH 351
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 VLDCFAG 8
VL CF G
Sbjct: 893 VLTCFRG 899
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 HVLDCFAGH 9
H DC GH
Sbjct: 343 HCPDCGEGH 351
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 DCFAGH 9
DC GH
Sbjct: 272 DCVTGH 277
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 HVLDCFAG 8
H++ C AG
Sbjct: 519 HIVRCCAG 526
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 HVLDCFAG 8
H++ C AG
Sbjct: 519 HIVRCCAG 526
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HVLDCFAG 8
H++ C AG
Sbjct: 519 HIVRCCAG 526
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 HVLDCFAG 8
H++ C AG
Sbjct: 519 HIVRCCAG 526
35|SequenceR|180|171|TICRTHVLDC
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 ICRTHVLDC 10
+C VLDC
Sbjct: 1906 LCVERVLDC 1914
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 ICRTHVLDC 10
+C VLDC
Sbjct: 1906 LCVERVLDC 1914
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 ICRTHVLDC 10
+C VLDC
Sbjct: 1906 LCVERVLDC 1914
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 ICRTHVLDC 10
+C VLDC
Sbjct: 1906 LCVERVLDC 1914
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 ICRTHVLDC 10
+C VLDC
Sbjct: 1906 LCVERVLDC 1914
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 ICRTHVLDC 10
+C VLDC
Sbjct: 1906 LCVERVLDC 1914
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 ICRTHVLDC 10
+C VLDC
Sbjct: 1906 LCVERVLDC 1914
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 ICRTHVLDC 10
+C VLDC
Sbjct: 1906 LCVERVLDC 1914
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 ICRTHVLDC 10
+C VLDC
Sbjct: 1906 LCVDRVLDC 1914
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 RTHVLDC 10
R HVL C
Sbjct: 1796 RKHVLSC 1802
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 TICRTHVLDC 10
T+C HVLDC
Sbjct: 4653 TMC--HVLDC 4660
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 TICRTHVLDC 10
T+C HVLDC
Sbjct: 4673 TMC--HVLDC 4680
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 TICRTHVLDC 10
T+C HVLDC
Sbjct: 4703 TMC--HVLDC 4710
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 5 THVLDC 10
+HV+DC
Sbjct: 1980 SHVVDC 1985
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 5 THVLDC 10
+HV+DC
Sbjct: 1980 SHVVDC 1985
>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51
Query: 2 ICRTHVLDC 10
+C+ +LDC
Sbjct: 10 VCQEKILDC 18
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 ICRTHVLDC 10
+C+ H DC
Sbjct: 816 VCQRHSPDC 824
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 ICRTHVLDC 10
+C+ H DC
Sbjct: 816 VCQRHSPDC 824
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 2 ICRTHVLDC 10
+C+ H DC
Sbjct: 816 VCQRHSPDC 824
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TICRTHVLD 9
TIC + +LD
Sbjct: 477 TICHSSLLD 485
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 ICRTHVLDC 10
+C+ H DC
Sbjct: 816 VCQRHSPDC 824
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 ICRTHVLDC 10
+C+ H DC
Sbjct: 816 VCQRHSPDC 824
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 2 ICRTHVLDC 10
+C+ H DC
Sbjct: 816 VCQRHSPDC 824
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 2 ICRTHVLDC 10
+C+ H DC
Sbjct: 816 VCQRHSPDC 824
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 2 ICRTHVLDC 10
+C+ H DC
Sbjct: 816 VCQRHSPDC 824
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 ICRTHVLDC 10
+C+ H DC
Sbjct: 816 VCQRHSPDC 824
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ICRTHVLD 9
ICR V+D
Sbjct: 370 ICRRDVVD 377
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ICRTHVLD 9
ICR V+D
Sbjct: 370 ICRRDVVD 377
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ICRTHVLD 9
ICR V+D
Sbjct: 370 ICRRDVVD 377
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 ICRTHVLD 9
ICR V+D
Sbjct: 370 ICRRDVVD 377
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 2 ICRTHVLD 9
ICRT+ D
Sbjct: 153 ICRTYFTD 160
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 TICRTH 6
+IC TH
Sbjct: 1984 SICNTH 1989
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 TICRTH 6
+IC TH
Sbjct: 1985 SICNTH 1990
>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 3 CRTHVLDC 10
C+T+ ++C
Sbjct: 135 CQTYYVEC 142
>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CRTHVLDC 10
C+T+ ++C
Sbjct: 135 CQTYYVEC 142
>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 3 CRTHVLDC 10
C+T+ ++C
Sbjct: 135 CQTYYVEC 142
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 TICRTHV 7
++C THV
Sbjct: 2274 SVCITHV 2280
36|SequenceR|185|176|HTGTPTICRT
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 3 GTPTICR 9
G P++CR
Sbjct: 18 GVPSVCR 24
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 GTPTICR 9
G P++CR
Sbjct: 18 GVPSVCR 24
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TGTPTICRT 10
+G P +CRT
Sbjct: 150 SGEPRLCRT 158
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HTGTPTIC 8
H G+P +C
Sbjct: 199 HAGSPALC 206
>sp|PG031_VAR67|PROTEIN C4|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 TGTPTICR 9
T P+ICR
Sbjct: 146 TYKPSICR 153
>sp|PG031_VACCC|PROTEIN C4|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TGTPTICR 9
T P+ICR
Sbjct: 146 TYKPSICR 153
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 GTPTIC 8
GTPT C
Sbjct: 534 GTPTSC 539
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GTPTICR 9
G P+ CR
Sbjct: 18 GVPSACR 24
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 3 GTPTICR 9
G P+ CR
Sbjct: 18 GVPSACR 24
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TGTPTIC 8
+G PT+C
Sbjct: 4 SGEPTVC 10
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 TGTPTIC 8
+G PT+C
Sbjct: 4 SGEPTVC 10
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 TPTIC 8
TPT+C
Sbjct: 68 TPTVC 72
>sp|UL56_HHV1E|PROTEIN UL56|Human herpesvirus 1 (strain HFEM)
Query: 4 TPTICRT 10
TP +CRT
Sbjct: 136 TPRLCRT 142
37|SequenceR|190|181|KKALPHTGTP
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 KALPHTGT 9
K+L H+GT
Sbjct: 149 KSLSHSGT 156
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 ALPHTGTP 10
A PH+G P
Sbjct: 724 AAPHSGGP 731
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 1 KKALPH 6
KKA+PH
Sbjct: 29 KKAIPH 34
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 1 KKALPH 6
KKA+PH
Sbjct: 29 KKAIPH 34
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 KALPHTG 8
K PHTG
Sbjct: 422 KVEPHTG 428
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 LPHTGTP 10
P+TG P
Sbjct: 22 FPYTGVP 28
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 LPHTGTP 10
P+TG P
Sbjct: 22 FPYTGVP 28
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 LPHTGTP 10
P+TG P
Sbjct: 22 FPYTGVP 28
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 LPHTGTP 10
P+TG P
Sbjct: 22 FPYTGVP 28
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 KKALPHTGTP 10
KK+ PH P
Sbjct: 567 KKSCPHGQCP 576
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 KKALPHTG 8
K LP+TG
Sbjct: 295 KSLLPNTG 302
38|SequenceR|195|186|RQAPLKKALP
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 1 RQAPLKKALP 10
R+APL+ A P
Sbjct: 141 REAPLRGAYP 150
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 QAPLKKALP 10
Q PLKK LP
Sbjct: 35 QLPLKKPLP 43
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 QAPLKKALP 10
Q PLKK LP
Sbjct: 35 QLPLKKPLP 43
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 QAPLKKALP 10
Q PLKK LP
Sbjct: 35 QLPLKKPLP 43
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 PLKKALP 10
P KKA P
Sbjct: 1144 PTKKAFP 1150
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 PLKKALP 10
P KKA P
Sbjct: 1144 PTKKAFP 1150
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 3 APLKKALP 10
+PL +ALP
Sbjct: 371 SPLPRALP 378
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 APLKKALP 10
AP++KA P
Sbjct: 718 APVRKAFP 725
39|SequenceR|200|191|VARNTRQAPL
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 1 VARNTRQAP 9
V RN ++AP
Sbjct: 166 VKRNVKKAP 174
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 1 VARNTRQAP 9
V RN ++AP
Sbjct: 166 VKRNVKKAP 174
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 3 RNTRQAPL 10
R TR+APL
Sbjct: 25 RPTRRAPL 32
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VARNTRQA 8
+ RNT+QA
Sbjct: 125 LTRNTKQA 132
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VARNTRQA 8
+ RNT+QA
Sbjct: 125 LTRNTKQA 132
40|SequenceR|205|196|SSSLAVARNT
***** No hits found ******
41|SequenceR|210|201|DPCMVSSSLA
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 2 PCMVSSS 8
PCM+S+S
Sbjct: 556 PCMISNS 562
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 2 PCMVSSS 8
PCM+S++
Sbjct: 565 PCMISNA 571
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PCMVSSS 8
PCM+S++
Sbjct: 565 PCMISNA 571
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 DPCMVSSSLA 10
D C+++SSLA
Sbjct: 26 DGCVITSSLA 35
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PCMVSSS 8
PCM+S +
Sbjct: 689 PCMISHT 695
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PCMVSSS 8
PCM+S +
Sbjct: 689 PCMISHT 695
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PCMVSSSLA 10
P MV+ SLA
Sbjct: 144 PLMVAGSLA 152
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PCMVSSSLA 10
P MV+ SLA
Sbjct: 144 PLMVAGSLA 152
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PCMVSSSLA 10
P MV+ SLA
Sbjct: 144 PLMVAGSLA 152
42|SequenceR|215|206|CRSRADPCMV
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 1 CRSRADPCMV 10
CRSR DP V
Sbjct: 21 CRSRIDPGYV 30
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 CRSRADPC 8
C+ A+PC
Sbjct: 558 CKKGAEPC 565
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 4 RADPCMV 10
RA+PC V
Sbjct: 982 RAEPCRV 988
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 4 RADPCMV 10
RA+PC V
Sbjct: 980 RAEPCRV 986
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 6 DPCMV 10
DPC+V
Sbjct: 739 DPCLV 743
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 CRSRADPC 8
C++ AD C
Sbjct: 1633 CKTLADTC 1640
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 CRSRAD 6
CR+RAD
Sbjct: 571 CRTRAD 576
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 CRSRADPCMV 10
CR DP V
Sbjct: 23 CRQNEDPRFV 32
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 CRSRADPCMV 10
CR DP V
Sbjct: 23 CRQNEDPRFV 32
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CRSRADPCMV 10
CR DP V
Sbjct: 23 CRQNEDPRFV 32
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 CRSRADPCMV 10
CR DP V
Sbjct: 23 CRQNEDPRFV 32
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CRSRADPCMV 10
C S + PC V
Sbjct: 18 CLSASSPCAV 27
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 CRSRAD 6
CR RAD
Sbjct: 141 CRQRAD 146
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 CRSRAD 6
CR RAD
Sbjct: 141 CRQRAD 146
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 3 SRADPC 8
+R DPC
Sbjct: 651 TRGDPC 656
43|SequenceR|220|211|TSGDPCRSRA
>sp|VGPCR_HHV8P|VIRAL G-protein coupled receptor|Human herpesvirus 8 type P
Query: 2 SGDPCRSRA 10
SGD CR R+
Sbjct: 176 SGDACRHRS 184
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 TSGDPCR 7
T+G PCR
Sbjct: 602 TTGAPCR 608
>sp|H7_VACCT|LATE protein H7|Vaccinia virus (strain Tian Tan)
Query: 2 SGDPCRSRA 10
SGD C++ A
Sbjct: 72 SGDECKTHA 80
>sp|PG112_VACCA|LATE protein OPG112|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SGDPCRSRA 10
SGD C++ A
Sbjct: 72 SGDECKTHA 80
>sp|PG112_VAR67|LATE protein OPG112|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 SGDPCRSRA 10
SGD C++ A
Sbjct: 72 SGDECKTHA 80
>sp|PG112_VACCC|LATE protein OPG112|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SGDPCRSRA 10
SGD C++ A
Sbjct: 72 SGDECKTHA 80
>sp|H7_VARV|LATE protein H7|Variola virus
Query: 2 SGDPCRSRA 10
SGD C++ A
Sbjct: 72 SGDECKTHA 80
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 SGDPCRSRA 10
SGDPC + A
Sbjct: 474 SGDPCYNGA 482
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 3 GDPCR 7
GDPC+
Sbjct: 563 GDPCK 567
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 SGDPCRSRA 10
SGDPC + A
Sbjct: 474 SGDPCYNGA 482
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 4 DPCRSRA 10
DP RSRA
Sbjct: 276 DPERSRA 282
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 2 SGDPCR 7
SGD CR
Sbjct: 219 SGDTCR 224
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 4 DPCRSRA 10
DP RSRA
Sbjct: 276 DPERSRA 282
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 4 DPCRSRA 10
DP RSRA
Sbjct: 276 DPERSRA 282
>sp|UL20_HHV11|PROTEIN UL20|Human herpesvirus 1 (strain 17)
Query: 4 DPCRSRA 10
DP R+RA
Sbjct: 174 DPLRTRA 180
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 PCRSRA 10
PCR+RA
Sbjct: 570 PCRTRA 575
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 2 SGDPCRS 8
SGDP RS
Sbjct: 344 SGDPMRS 350
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 3 GDPC 6
GDPC
Sbjct: 446 GDPC 449
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 TSGDPC 6
T GDPC
Sbjct: 651 TRGDPC 656
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 SGDPCRS 8
SGDP R+
Sbjct: 1949 SGDPLRN 1955
44|SequenceR|225|216|PLECCTSGDP
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 PLECCTSGDP 10
PLE C + DP
Sbjct: 1981 PLEDCFTKDP 1990
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 LECCTSG 8
L CCT G
Sbjct: 263 LTCCTRG 269
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 LECCTSG 8
L CCT G
Sbjct: 272 LTCCTRG 278
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 LECCTSG 8
L CCT G
Sbjct: 272 LTCCTRG 278
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 LECCTSGDP 10
+E C GDP
Sbjct: 1146 IEKCQQGDP 1154
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 LECCTSGDP 10
+E C GDP
Sbjct: 1145 IEKCQQGDP 1153
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 1 PLECCTSGD 9
P+EC T D
Sbjct: 60 PIECNTDND 68
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 LECCTSGDP 10
+E C GDP
Sbjct: 1145 IEKCQQGDP 1153
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 ECCTSGDP 10
ECCT P
Sbjct: 1348 ECCTKEVP 1355
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 ECCTSGDP 10
ECCT P
Sbjct: 1348 ECCTKEVP 1355
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CCTSGD 9
CC+ GD
Sbjct: 5048 CCSHGD 5053
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CCTSGD 9
CC+ GD
Sbjct: 5068 CCSHGD 5073
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CCTSGD 9
CC+ GD
Sbjct: 5098 CCSHGD 5103
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 PLECCTS 7
P ECC++
Sbjct: 11 PKECCSA 17
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 ECCTSGD 9
E C+SGD
Sbjct: 1188 EHCSSGD 1194
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 ECCTSGD 9
E C+SGD
Sbjct: 1188 EHCSSGD 1194
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 ECCTSGD 9
E C+SGD
Sbjct: 1188 EHCSSGD 1194
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 2 LECCTSGD 9
+EC T GD
Sbjct: 359 IECYTMGD 366
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 LECCTSGD 9
+EC T GD
Sbjct: 369 IECYTMGD 376
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 5 CTSGD 9
CTSGD
Sbjct: 17 CTSGD 21
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PLECCTSGD 9
P C T GD
Sbjct: 227 PSNCYTDGD 235
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PLECCTSGD 9
P C T GD
Sbjct: 227 PSNCYTDGD 235
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 4 CCTSG 8
CCT+G
Sbjct: 825 CCTAG 829
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 4 CCTSG 8
CCT+G
Sbjct: 825 CCTAG 829
>sp|VE4_HPV16|PROTEIN E4|Human papillomavirus type 16
Query: 1 PLECCT 6
PL CCT
Sbjct: 58 PLSCCT 63
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 3 ECCTSG 8
ECC+S
Sbjct: 341 ECCSSA 346
>sp|TAT_HV2NZ|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 PLECCTSG 8
PLE CT+
Sbjct: 46 PLEACTNS 53
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 LECCTSGD 9
+EC T GD
Sbjct: 369 IECYTLGD 376
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 PLECCTS 7
PL+ CTS
Sbjct: 218 PLDICTS 224
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 LECCT 6
L+CCT
Sbjct: 6387 LKCCT 6391
>sp|VE6_HPV08|PROTEIN E6|Human papillomavirus type 8
Query: 1 PLECCTSGDP 10
L+CC G P
Sbjct: 124 KLDCCGRGRP 133
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 LECCT 6
L CCT
Sbjct: 1433 LRCCT 1437
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 PLECCTS 7
PL+ CTS
Sbjct: 221 PLDICTS 227
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 LECCT 6
L CCT
Sbjct: 1347 LRCCT 1351
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PLECCTS 7
PL C TS
Sbjct: 219 PLRCLTS 225
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PLECCTS 7
PL C TS
Sbjct: 219 PLRCLTS 225
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 PLECCTS 7
PL+ CTS
Sbjct: 251 PLDICTS 257
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 PLECCTS 7
PL+ CTS
Sbjct: 219 PLDLCTS 225
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 PLECCTS 7
PL+ CTS
Sbjct: 219 PLDLCTS 225
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 PLECCTS 7
PL+ CTS
Sbjct: 220 PLDICTS 226
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 LECCT 6
L CCT
Sbjct: 6358 LRCCT 6362
45|SequenceR|230|221|GYKGSPLECC
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 YKGSPLECC 10
YKG L+CC
Sbjct: 38 YKGWCLDCC 46
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GYKGSPLEC 9
G G PLEC
Sbjct: 192 GPDGYPLEC 200
Query: 2 YKGSPLE 8
Y+G PLE
Sbjct: 955 YQGKPLE 961
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GYKGSPLEC 9
G G PLEC
Sbjct: 192 GPDGYPLEC 200
Query: 2 YKGSPLE 8
Y+G PLE
Sbjct: 955 YQGKPLE 961
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 763 GWKGSP 768
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 762 GWKGSP 767
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 764 GWKGSP 769
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 761 GWKGSP 766
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 763 GWKGSP 768
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 764 GWKGSP 769
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 762 GWKGSP 767
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 763 GWKGSP 768
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 740 GWKGSP 745
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 749 GWKGSP 754
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 749 GWKGSP 754
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 739 GWKGSP 744
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 733 GWKGSP 738
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 740 GWKGSP 745
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 732 GWKGSP 737
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 737 GWKGSP 742
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 736 GWKGSP 741
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 736 GWKGSP 741
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 740 GWKGSP 745
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 738 GWKGSP 743
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 736 GWKGSP 741
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 739 GWKGSP 744
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 740 GWKGSP 745
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 734 GWKGSP 739
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 745 GWKGSP 750
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 744 GWKGSP 749
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 738 GWKGSP 743
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 739 GWKGSP 744
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 743 GWKGSP 748
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 739 GWKGSP 744
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 743 GWKGSP 748
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 739 GWKGSP 744
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 751 GWKGSP 756
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 739 GWKGSP 744
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 751 GWKGSP 756
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 751 GWKGSP 756
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 738 GWKGSP 743
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 741 GWKGSP 746
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 739 GWKGSP 744
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 734 GWKGSP 739
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 734 GWKGSP 739
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 734 GWKGSP 739
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 735 GWKGSP 740
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 739 GWKGSP 744
>sp|VE4_HPV16|PROTEIN E4|Human papillomavirus type 16
Query: 4 GSPLECC 10
+PL CC
Sbjct: 56 ATPLSCC 62
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 761 GWKGSP 766
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 763 GWKGSP 768
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GYKGSP 6
G+KGSP
Sbjct: 763 GWKGSP 768
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 YKGSPLE 8
YK SP+E
Sbjct: 126 YKSSPIE 132
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 4 GSPLECC 10
G P+ CC
Sbjct: 189 GYPVSCC 195
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 4 GSPLEC 9
G P+EC
Sbjct: 342 GEPIEC 347
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 YKGSPLE 8
Y G PLE
Sbjct: 1539 YMGEPLE 1545
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 YKGSPLE 8
Y G PLE
Sbjct: 1949 YMGEPLE 1955
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 YKGSPLE 8
Y G PLE
Sbjct: 1949 YMGEPLE 1955
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 YKGSPLE 8
Y G PLE
Sbjct: 1949 YMGEPLE 1955
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 YKGSPLE 8
Y G PLE
Sbjct: 1949 YMGEPLE 1955
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 YKGSPLE 8
Y G PLE
Sbjct: 1949 YMGEPLE 1955
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 YKGSPLE 8
Y G PLE
Sbjct: 1949 YMGEPLE 1955
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 YKGSPLE 8
Y G PLE
Sbjct: 1949 YMGEPLE 1955
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 3 KGSPLEC 9
KG P +C
Sbjct: 620 KGGPFDC 626
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 YKGSPLEC 9
YKG+ ++C
Sbjct: 844 YKGNDIKC 851
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 YKGSPLEC 9
YKG+ ++C
Sbjct: 844 YKGNDIKC 851
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 GYKGSPLEC 9
GY + LEC
Sbjct: 1548 GYGKAKLEC 1556
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 GYKGSPLEC 9
GY + LEC
Sbjct: 1548 GYGKAKLEC 1556
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 GYKGSPLEC 9
GY + LEC
Sbjct: 1548 GYGKAKLEC 1556
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 KGSPLEC 9
+G PL C
Sbjct: 388 RGQPLAC 394
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 GYKGSPLEC 9
GY + LEC
Sbjct: 459 GYGKATLEC 467
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 GYKGSPLEC 9
GY + LEC
Sbjct: 459 GYGKATLEC 467
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GYKGSPLEC 9
GY + LEC
Sbjct: 459 GYGKATLEC 467
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 GYKGSPLEC 9
GY + LEC
Sbjct: 459 GYGKATLEC 467
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 GYKGSPLEC 9
GY + LEC
Sbjct: 459 GYGKATLEC 467
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GYKGSPLEC 9
GY + LEC
Sbjct: 459 GYGKATLEC 467
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 GYKGSPLEC 9
GY + LEC
Sbjct: 459 GYGKATLEC 467
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 GYKGSPLEC 9
GY + LEC
Sbjct: 459 GYGKATLEC 467
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GYKGSPLEC 9
G G PL+C
Sbjct: 192 GPDGYPLDC 200
Query: 2 YKGSPLE 8
Y+G PLE
Sbjct: 957 YQGLPLE 963
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GYKGSPLEC 9
G G PL+C
Sbjct: 192 GPDGYPLDC 200
Query: 2 YKGSPLE 8
Y+G PLE
Sbjct: 957 YQGLPLE 963
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 KGSPLE 8
KG PLE
Sbjct: 94 KGKPLE 99
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 3 KGSPLE 8
KG PLE
Sbjct: 94 KGKPLE 99
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 KGSPLE 8
KG PLE
Sbjct: 94 KGKPLE 99
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 KGSPLE 8
KG PLE
Sbjct: 94 KGKPLE 99
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 KGSPLE 8
KG PLE
Sbjct: 94 KGKPLE 99
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 KGSPLE 8
KG PLE
Sbjct: 94 KGKPLE 99
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 KGSPLE 8
KG PLE
Sbjct: 94 KGKPLE 99
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 KGSPLE 8
KG PLE
Sbjct: 94 KGKPLE 99
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 3 KGSPLE 8
KG PLE
Sbjct: 94 KGKPLE 99
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 GYKGSPLEC 9
GY GS ++C
Sbjct: 404 GYSGSFIDC 412
>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P
Query: 4 GSPLECC 10
G PLE C
Sbjct: 27 GDPLEGC 33
>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GYKGSPLEC 9
G G+P EC
Sbjct: 29 GCVGNPQEC 37
>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 GYKGSPLEC 9
G G+P EC
Sbjct: 29 GCVGNPQEC 37
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 GYKGSPLEC 9
GY + LEC
Sbjct: 459 GYGKATLEC 467
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 1 GYKGSPLEC 9
GY P++C
Sbjct: 139 GYNIIPIQC 147
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 GYKGSPL 7
GY G P+
Sbjct: 1428 GYSGQPV 1434
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 GYKGSPLE 8
GYK +P E
Sbjct: 668 GYKVNPTE 675
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 GYKGSPLE 8
GYK +P E
Sbjct: 668 GYKVNPTE 675
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GYKGSPLE 8
GYK +P E
Sbjct: 668 GYKVNPTE 675
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GYKGSPLE 8
GYK +P E
Sbjct: 668 GYKVNPTE 675
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 GYKGSPLE 8
GYK +P E
Sbjct: 668 GYKVNPTE 675
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 GYKGSPL 7
GY G P+
Sbjct: 1425 GYSGQPV 1431
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YKGSPLECC 10
Y G+ CC
Sbjct: 81 YNGTAPNCC 89
46|SequenceR|235|226|PMPCCGYKGS
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PMPCCGYKGS 10
P PC +GS
Sbjct: 35 PTPCSTRQGS 44
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 MPCCGYKGS 10
M CC Y G+
Sbjct: 1382 MLCCLYSGN 1390
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 3 PCCGYKGS 10
PC G +GS
Sbjct: 546 PCPGARGS 553
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 2 MPCCGY 7
+PCC +
Sbjct: 551 IPCCSF 556
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 2 MPCCGY 7
+PCC +
Sbjct: 536 IPCCSF 541
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 CCGYK 8
CC YK
Sbjct: 467 CCNYK 471
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CCGYK 8
CC YK
Sbjct: 467 CCNYK 471
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 4 CCGYK 8
CC YK
Sbjct: 467 CCNYK 471
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PMPCCGYKG 9
P P C YK
Sbjct: 1186 PSPQCTYKA 1194
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 2 MPCCGY 7
M CCG+
Sbjct: 12 MGCCGW 17
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 4 CCGYKG 9
CC YK
Sbjct: 517 CCAYKA 522
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 1 PMPCCGYKG 9
P P YKG
Sbjct: 32 PAPVTKYKG 40
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 PMPCCGYKG 9
P P YKG
Sbjct: 32 PAPVTKYKG 40
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 1 PMPCC 5
P PCC
Sbjct: 188 PTPCC 192
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PMPCCGYKG 9
P P C YK
Sbjct: 1186 PGPQCTYKA 1194
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PMPCCGYKG 9
P P C YK
Sbjct: 1186 PGPQCTYKA 1194
>sp|E316_ADE03|EARLY E3 16 kDa glycoprotein|Human adenovirus B serotype 3
Query: 3 PCCGY 7
PCC Y
Sbjct: 128 PCCAY 132
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PMPCCGYKG 9
P+P G KG
Sbjct: 472 PLPEAGAKG 480
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 PMPCCGYKG 9
P P YKG
Sbjct: 32 PSPLTKYKG 40
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 CGYKGS 10
CGY G+
Sbjct: 473 CGYTGT 478
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 4 CCGYKG 9
CC KG
Sbjct: 70 CCSIKG 75
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CCGY 7
CCGY
Sbjct: 78 CCGY 81
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 PMPCCG 6
P+PC G
Sbjct: 1973 PVPCAG 1978
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 4 CCGY 7
CCGY
Sbjct: 110 CCGY 113
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PMPCCG 6
P+PC G
Sbjct: 1973 PVPCSG 1978
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PMPCCG 6
P+PC G
Sbjct: 1973 PVPCSG 1978
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 CGYKG 9
CGYK
Sbjct: 552 CGYKA 556
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 PMPCCG 6
P+PC G
Sbjct: 1973 PIPCSG 1978
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 4 CCGYKG 9
CC YK
Sbjct: 386 CCPYKA 391
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CCGY 7
CCGY
Sbjct: 110 CCGY 113
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 5 CGYKGS 10
C Y+GS
Sbjct: 439 CNYRGS 444
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 4 CCGYKG 9
CC YK
Sbjct: 447 CCPYKA 452
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 4 CCGYKG 9
CC YK
Sbjct: 513 CCPYKA 518
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 PMPCCG 6
P+PC G
Sbjct: 1973 PIPCSG 1978
>sp|NS12_CVHN5|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N5)
Query: 3 PCCGY 7
PC GY
Sbjct: 34 PCVGY 38
>sp|NS12_CVHN2|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N2)
Query: 3 PCCGY 7
PC GY
Sbjct: 34 PCVGY 38
47|SequenceR|240|231|CCTANPMPCC
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CTANPMP 8
C ANP+P
Sbjct: 81 CQANPIP 87
Query: 1 CCTANPMPCC 10
C T + +P C
Sbjct: 799 CVTNDQIPTC 808
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CTANPMP 8
C ANP+P
Sbjct: 81 CQANPIP 87
Query: 1 CCTANPMPCC 10
C T + +P C
Sbjct: 799 CVTNDQIPTC 808
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CTANPMP 8
C ANP+P
Sbjct: 81 CQANPIP 87
Query: 1 CCTANPMPCC 10
C T + +P C
Sbjct: 799 CVTNDQIPTC 808
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1379 CCPVNFKKCC 1388
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1389 CCPVNFKKCC 1398
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1375 CCPVNFKKCC 1384
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1371 CCPVNFKKCC 1380
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1370 CCPVNFKKCC 1379
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1382 CCPVNFKRCC 1391
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1383 CCPVNFKRCC 1392
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1371 CCPVNFKRCC 1380
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1381 CCPVNFKRCC 1390
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1391 CCPVNFKRCC 1400
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 CCTANPMPCC 10
CC N CC
Sbjct: 1373 CCPVNFKRCC 1382
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 CCTANPMP 8
CC A MP
Sbjct: 1089 CCRACTMP 1096
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 CCTANPMP 8
CC A MP
Sbjct: 1089 CCRACTMP 1096
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 CCTANPMP 8
CC A MP
Sbjct: 1089 CCRACTMP 1096
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 CCTANPMP 8
CC A MP
Sbjct: 1089 CCRACTMP 1096
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 CCTANPMPC 9
CC PC
Sbjct: 557 CCKKGAEPC 565
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 CCTANPMPCC 10
C T + +P C
Sbjct: 788 CVTNDQLPTC 797
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 CCTANPMPCC 10
C T + +P C
Sbjct: 789 CVTNDQLPTC 798
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 CCTANP 6
C TANP
Sbjct: 1724 CGTANP 1729
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 CCTANP 6
C TANP
Sbjct: 1724 CGTANP 1729
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 CCTANPMP 8
C T NP P
Sbjct: 177 CATDNPPP 184
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 TANPMP 8
TANP P
Sbjct: 286 TANPQP 291
Query: 3 TANPMP 8
T NP+P
Sbjct: 796 TGNPLP 801
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 CCTANPMPCC 10
C T + +P C
Sbjct: 799 CVTNDQIPTC 808
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 CCTANPMPCC 10
C T + +P C
Sbjct: 799 CVTNDQIPTC 808
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CCTANPMPCC 10
C T + +P C
Sbjct: 799 CVTNDQIPTC 808
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CCTANPMPCC 10
C T + +P C
Sbjct: 799 CVTNDQIPTC 808
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 CCTANPMPC 9
CC PC
Sbjct: 556 CCMKGAEPC 564
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 2 CTANPMPC 9
CT +PC
Sbjct: 157 CTQASVPC 164
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 CCTANPMPC 9
CC PC
Sbjct: 556 CCMKGAEPC 564
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CCTANPMPC 9
C TA P C
Sbjct: 359 CITATPSEC 367
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 2 CTANPMPC 9
CT +PC
Sbjct: 137 CTQASVPC 144
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 2 CTANPMPC 9
CT +PC
Sbjct: 162 CTQASVPC 169
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 CTANPMP 8
C++ P+P
Sbjct: 1635 CSSTPLP 1641
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 CTANPMP 8
C++ P+P
Sbjct: 1635 CSSTPLP 1641
>sp|Y168_ADE02|UNCHARACTERIZED protein C-168|Human adenovirus C serotype 2
Query: 1 CCTANPMP 8
CC P P
Sbjct: 111 CCVGTPPP 118
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 3 TANPM 7
TANPM
Sbjct: 378 TANPM 382
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 TANPM 7
TANPM
Sbjct: 378 TANPM 382
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 TANPM 7
TANPM
Sbjct: 378 TANPM 382
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 TANPMP 8
T NP+P
Sbjct: 248 TGNPLP 253
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 TANPMP 8
T NP+P
Sbjct: 248 TGNPLP 253
48|SequenceR|245|236|HLHDSCCTAN
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 2 LHDSCCTAN 10
+HD+ C AN
Sbjct: 340 VHDAACPAN 348
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 2 LHDSCCTAN 10
+HD+ C AN
Sbjct: 340 VHDAACPAN 348
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 476 NLHDSC 481
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 476 NLHDSC 481
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 4 DSCCT 8
DSCCT
Sbjct: 308 DSCCT 312
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 476 NLHDSC 481
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 476 NLHDSC 481
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 4 DSCCT 8
DSCCT
Sbjct: 306 DSCCT 310
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 466 NLHDSC 471
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 479 NLHDSC 484
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 477 NLHDSC 482
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 476 NLHDSC 481
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 477 NLHDSC 482
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LHDSCCTAN 10
L+DSC T N
Sbjct: 7 LYDSCKTFN 15
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 479 NLHDSC 484
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 476 NLHDSC 481
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 479 NLHDSC 484
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 472 NLHDSC 477
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 479 NLHDSC 484
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 477 NLHDSC 482
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 479 NLHDSC 484
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 472 NLHDSC 477
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LHDSC 6
LHDSC
Sbjct: 478 LHDSC 482
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 479 NLHDSC 484
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 466 NLHDSC 471
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LHDSC 6
LHDSC
Sbjct: 478 LHDSC 482
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LHDSC 6
LHDSC
Sbjct: 478 LHDSC 482
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LHDSC 6
LHDSC
Sbjct: 478 LHDSC 482
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LHDSC 6
LHDSC
Sbjct: 478 LHDSC 482
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 466 NLHDSC 471
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 6 CCTAN 10
CCT N
Sbjct: 523 CCTGN 527
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 6 CCTAN 10
CCT N
Sbjct: 523 CCTGN 527
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LHDSC 6
LHDSC
Sbjct: 478 LHDSC 482
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LHDSC 6
LHDSC
Sbjct: 473 LHDSC 477
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 4 DSCCTAN 10
D CCT++
Sbjct: 694 DLCCTSD 700
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 HLHDSC 6
+LHDSC
Sbjct: 466 NLHDSC 471
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 HDSCCT 8
H++CC+
Sbjct: 5007 HETCCS 5012
>sp|YVFF_VACCC|UNCHARACTERIZED 8.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HLHDSCC 7
+LH CC
Sbjct: 52 YLHSFCC 58
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 2 LHDSCCTAN 10
L+DSC T N
Sbjct: 7 LYDSCKTFN 15
>sp|IR05_HCMVA|UNCHARACTERIZED protein IRL5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LHDSCC 7
HD CC
Sbjct: 52 FHDCCC 57
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 HLHDSCCTA 9
HL CC A
Sbjct: 1611 HLSFVCCLA 1619
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LHDSCC 7
+H+ CC
Sbjct: 1081 IHEWCC 1086
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LHDSCC 7
+H+ CC
Sbjct: 1081 IHEWCC 1086
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LHDSCC 7
+H+ CC
Sbjct: 1081 IHEWCC 1086
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LHDSCC 7
+H+ CC
Sbjct: 1081 IHEWCC 1086
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LHDSCC 7
+H+ CC
Sbjct: 1081 IHEWCC 1086
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LHDSCC 7
+H+ CC
Sbjct: 1083 IHEWCC 1088
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LHDSCC 7
+H+ CC
Sbjct: 1082 IHEWCC 1087
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LHDSCC 7
+H+ CC
Sbjct: 1083 IHEWCC 1088
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 SCCT 8
SCCT
Sbjct: 844 SCCT 847
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 3 HDSCCTAN 10
HD CT+N
Sbjct: 1052 HDKDCTSN 1059
49|SequenceR|250|241|DQPCCHLHDS
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 3 PCCHLHD 9
PCC LHD
Sbjct: 443 PCCFLHD 449
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PCCHL 7
PCCH+
Sbjct: 27 PCCHV 31
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PCCHL 7
PCCH+
Sbjct: 27 PCCHV 31
>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 310 DTPCWKLHTS 319
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 310 DTPCWKLHTS 319
>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 310 DTPCWKLHTS 319
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 310 DTPCWKLHTS 319
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 1 DQPCCHLHDS 10
D PC LH S
Sbjct: 310 DTPCWKLHTS 319
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 3 PCCHLHD 9
PCC L D
Sbjct: 443 PCCFLKD 449
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PCCHL 7
PCCH+
Sbjct: 27 PCCHV 31
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 QPCCHLHDS 10
Q CC + DS
Sbjct: 2556 QRCCQMKDS 2564
>sp|NCAP_UUKS|NUCLEOPROTEIN virus (strain S23) (UUKV)
Query: 1 DQPCCHLHDS 10
D P C +H++
Sbjct: 148 DYPVCMMHNA 157
>sp|UL41_HCMVA|UNCHARACTERIZED protein UL41|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PCCHLHD 9
PC LHD
Sbjct: 116 PCLRLHD 122
>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)
Query: 2 QPCCH 6
QP CH
Sbjct: 221 QPVCH 225
>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 QPCCH 6
QP CH
Sbjct: 221 QPVCH 225
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 3 PCCHL 7
PCC L
Sbjct: 438 PCCFL 442
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 CCHLHDS 10
CC ++DS
Sbjct: 389 CCTVYDS 395
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 CCHLHDS 10
CC ++DS
Sbjct: 389 CCTVYDS 395
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 3 PCCHLHDS 10
PCC + D+
Sbjct: 190 PCCQITDT 197
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 CCHLHDS 10
CC ++DS
Sbjct: 389 CCTVYDS 395
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CCHLHDS 10
CC ++DS
Sbjct: 389 CCTVYDS 395
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CCHLHDS 10
CC ++DS
Sbjct: 389 CCTVYDS 395
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CCHLHDS 10
CC ++DS
Sbjct: 389 CCTVYDS 395
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QKCCNLFE 697
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 DQPCCH 6
D P CH
Sbjct: 272 DGPLCH 277
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 DQPCCHLH 8
+Q C HLH
Sbjct: 50 EQECLHLH 57
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 3 PCCHL 7
P CHL
Sbjct: 339 PTCHL 343
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DQPCCHLH 8
+Q C HLH
Sbjct: 50 EQECLHLH 57
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 PCCHLHDS 10
P C++H S
Sbjct: 673 PLCYMHVS 680
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 PCCHLHDS 10
P C++H S
Sbjct: 673 PLCYMHVS 680
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PCCHL 7
P CHL
Sbjct: 326 PTCHL 330
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 PCCHLHDS 10
P C++H S
Sbjct: 673 PLCYMHVS 680
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 PCCHLHDS 10
P C++H S
Sbjct: 673 PLCYMHVS 680
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 PCCHLHDS 10
P C++H S
Sbjct: 673 PLCYMHVS 680
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DQPCC 5
D+PCC
Sbjct: 170 DEPCC 174
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 2 QPCCHLHD 9
Q CC+L +
Sbjct: 690 QRCCNLFE 697
>sp|SLFN_VACCC|SCHLAFEN-LIKE protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 QPCCHLH 8
+ CC++H
Sbjct: 24 KECCYVH 30
50|SequenceR|255|246|LDCVTDQPCC
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 4 VTDQPCC 10
VTD+ CC
Sbjct: 251 VTDEQCC 257
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 4 VTDQPCC 10
VTD+ CC
Sbjct: 251 VTDEQCC 257
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 2 DCVTDQPCC 10
DCV P C
Sbjct: 365 DCVRSVPVC 373
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 2 DCVTDQPCC 10
DCV P C
Sbjct: 365 DCVRSVPVC 373
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LDCVTDQPC 9
++C T+ PC
Sbjct: 2066 INCYTEGPC 2074
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LDCVTDQPC 9
++C T+ PC
Sbjct: 2066 INCYTEGPC 2074
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 LDCVTDQPC 9
L+ +TDQ C
Sbjct: 1132 LNYITDQTC 1140
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 LDCVTDQP 8
L CV D+P
Sbjct: 175 LPCVEDKP 182
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 DCVTDQPCC 10
+ TDQP C
Sbjct: 1991 NSATDQPEC 1999
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 DCVTDQPCC 10
+ TDQP C
Sbjct: 1993 NSATDQPEC 2001
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 2 DCVTDQPC 9
DCV PC
Sbjct: 237 DCVDAPPC 244
>sp|UL05_HCMVM|PROTEIN UL5|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DCVTDQPCC 10
DC + CC
Sbjct: 39 DCAAFESCC 47
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 5 TDQPC 9
TD PC
Sbjct: 268 TDNPC 272
>sp|UL05_HCMVA|PROTEIN UL5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DCVTDQPCC 10
DC + CC
Sbjct: 39 DCAAFESCC 47
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DCVTDQPCC 10
DCV P C
Sbjct: 362 DCVRPVPVC 370
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 DCVTDQ 7
DCVTD
Sbjct: 925 DCVTDH 930
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CVTDQPC 9
CV +PC
Sbjct: 581 CVIGRPC 587
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 3 CVTDQPC 9
CV +PC
Sbjct: 581 CVIGRPC 587
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 3 CVTDQPC 9
CV +PC
Sbjct: 581 CVIGRPC 587
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 CVTDQPC 9
CV +PC
Sbjct: 581 CVIGRPC 587
>sp|J1S_HCMVA|UNCHARACTERIZED protein J1S|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LDCVTDQPCC 10
CV PCC
Sbjct: 114 FSCVPRDPCC 123
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LDCVTDQPCC 10
CV PCC
Sbjct: 231 FSCVPRDPCC 240
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 2 DCVTDQPCC 10
+C+ + P C
Sbjct: 676 ECLINNPMC 684
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 2 DCVTDQPCC 10
+C+ + P C
Sbjct: 676 ECLINNPMC 684
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 DCVTDQPCC 10
+C+ + P C
Sbjct: 676 ECLINNPMC 684
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LDCVTD 6
LDC TD
Sbjct: 1447 LDCGTD 1452
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 LDCVTDQP 8
+ C TD P
Sbjct: 175 IPCATDNP 182
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 CVTDQPC 9
C+++ PC
Sbjct: 4348 CLSNTPC 4354
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 DCVTDQPCC 10
+C+ PCC
Sbjct: 781 NCLKLLPCC 789
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 DCVTDQPCC 10
+C+ PCC
Sbjct: 781 NCLKLLPCC 789
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 DCVTD 6
DC+TD
Sbjct: 601 DCLTD 605
51|SequenceR|260|251|CKSQILDCVT
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVERVLDCRT 1916
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CKSQILDCVT 10
C ++LDC T
Sbjct: 1907 CVDRVLDCRT 1916
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 1 CKSQILDC 8
C+++ILDC
Sbjct: 11 CQNKILDC 18
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 1 CKSQILDCVT 10
C SQIL V+
Sbjct: 276 CDSQILATVS 285
>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15
Query: 1 CKSQILDCVT 10
C SQIL V+
Sbjct: 209 CGSQILGSVS 218
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 3 SQILDCV 9
+++LDCV
Sbjct: 110 NEVLDCV 116
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 3 SQILDCV 9
+++LDCV
Sbjct: 111 NEVLDCV 117
>sp|A47_VARV|PROTEIN A47|Variola virus
Query: 4 QILDCVT 10
Q+L CVT
Sbjct: 237 QLLHCVT 243
>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 QILDCVT 10
Q+L CVT
Sbjct: 237 QLLHCVT 243
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 1 CKSQILDC 8
CK +L C
Sbjct: 40 CKCSVLTC 47
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 CKSQILDCVT 10
CK +LD VT
Sbjct: 473 CKIALLDDVT 482
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 CKSQILDCVT 10
CK +LD VT
Sbjct: 471 CKIALLDDVT 480
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 CKSQILDCVT 10
CK +LD VT
Sbjct: 470 CKIALLDDVT 479
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 CKSQILDCVT 10
CK +LD VT
Sbjct: 473 CKIALLDDVT 482
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 CKSQILDCVT 10
CK +LD VT
Sbjct: 472 CKIALLDDVT 481
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 CKSQILDCVT 10
CK +LD VT
Sbjct: 471 CKIALLDDVT 480
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 CKSQILD 7
C+S +LD
Sbjct: 2117 CRSSLLD 2123
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 CKSQILDCV 9
C+ Q L CV
Sbjct: 319 CRDQELCCV 327
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 1 CKSQILDCV 9
C+ Q L CV
Sbjct: 319 CRDQELCCV 327
>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SQILDCV 9
+++LDC+
Sbjct: 342 NRVLDCI 348
>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SQILDCV 9
+++LDC+
Sbjct: 341 NRVLDCI 347
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 4 QILDC 8
QILDC
Sbjct: 702 QILDC 706
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 QILDC 8
QILDC
Sbjct: 702 QILDC 706
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 CKSQILDC 8
CK LDC
Sbjct: 38 CKGWCLDC 45
52|SequenceR|265|256|NEKSLCKSQI
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 NEKSLCKSQI 10
NE++LC + I
Sbjct: 13 NEQTLCGTNI 22
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 NEKSLCKSQI 10
+EK+L +SQ+
Sbjct: 1132 DEKTLVQSQV 1141
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 NEKSLCKSQI 10
+EK+L +SQ+
Sbjct: 1132 DEKTLVQSQV 1141
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 NEKSLCKSQI 10
N+KS+C+ +
Sbjct: 333 NQKSICQQAV 342
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 NEKSLCKSQI 10
N+KS+C+ +
Sbjct: 334 NQKSICQQAV 343
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 NEKSLCKSQI 10
N+KS+C+ +
Sbjct: 334 NQKSICQQAV 343
53|SequenceR|270|261|LDTTANEKSL
>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 DTTANEK 8
DTTANE+
Sbjct: 312 DTTANEE 318
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 DTTANEK 8
DTTANE+
Sbjct: 312 DTTANEE 318
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 DTTANEK 8
DTTANE+
Sbjct: 312 DTTANEE 318
54|SequenceR|275|266|PLKTLLDTTA
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 PLKTLLDTT 9
P+K +DTT
Sbjct: 1253 PIKNTVDTT 1261
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 PLKTLLDTT 9
P+K +DTT
Sbjct: 1253 PIKNTVDTT 1261
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 LKTLLDTT 9
L+T++DTT
Sbjct: 1791 LRTMVDTT 1798
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 LKTLLDTT 9
L+T++DTT
Sbjct: 1791 LRTMVDTT 1798
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 PLKTLL 6
PLKT+L
Sbjct: 1156 PLKTIL 1161
55|SequenceR|280|271|GVTHAPLKTL
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 2 VTHAPLKTL 10
+TH+PL TL
Sbjct: 127 LTHSPLDTL 135
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 3 THAPLKTL 10
TH P+K L
Sbjct: 301 THDPVKQL 308
>sp|GL_HHV2H|ENVELOPE glycoprotein L|Human herpesvirus 2 (strain HG52)
Query: 1 GVTHAPLK 8
V+HAP++
Sbjct: 139 AVSHAPVR 146
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 THAPLKTL 10
+H P KT+
Sbjct: 648 SHGPAKTM 655
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 THAPLKTL 10
+H P KT+
Sbjct: 648 SHGPAKTM 655
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 THAPLKTL 10
+H P KT+
Sbjct: 648 SHGPAKTM 655
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 THAPLKTL 10
+H P KT+
Sbjct: 648 SHGPAKTM 655
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 THAPLKTL 10
+H P KT+
Sbjct: 648 SHGPAKTM 655
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 GVTHAPLK 8
GVT PLK
Sbjct: 2194 GVTCRPLK 2201
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 VTHAPL 7
VTH+PL
Sbjct: 675 VTHSPL 680
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 VTHAPL 7
VTH+PL
Sbjct: 675 VTHSPL 680
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 VTHAPL 7
VTH+PL
Sbjct: 675 VTHSPL 680
56|SequenceR|285|276|DCKVDGVTHA
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 VDGVTHA 10
+DGV HA
Sbjct: 202 IDGVPHA 208
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 VDGVTHA 10
+DGV HA
Sbjct: 202 IDGVPHA 208
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 CKVDGV 7
CK+DGV
Sbjct: 208 CKIDGV 213
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 4 VDGVTH 9
VDG TH
Sbjct: 381 VDGTTH 386
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 CKVDGV 7
CK+DG+
Sbjct: 206 CKIDGI 211
>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 VDGVTH 9
VDGV H
Sbjct: 230 VDGVNH 235
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 4 VDGVTH 9
VDGV H
Sbjct: 230 VDGVNH 235
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 VDGVTH 9
VDGV H
Sbjct: 230 VDGVNH 235
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 VDGVTH 9
VDGV H
Sbjct: 230 VDGVNH 235
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 4 VDGVTH 9
VDGV H
Sbjct: 230 VDGVNH 235
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 VDGVTH 9
VDGV H
Sbjct: 230 VDGVNH 235
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 4 VDGVTH 9
VDGV H
Sbjct: 230 VDGVNH 235
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 VDGVTH 9
VDGV H
Sbjct: 230 VDGVNH 235
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 4 VDGVTH 9
VDGV H
Sbjct: 230 VDGVNH 235
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 VDGVTH 9
VDGV H
Sbjct: 230 VDGVNH 235
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DCKVDGV 7
DC DG+
Sbjct: 76 DCAYDGI 82
>sp|VE7_HPV45|PROTEIN E7|Human papillomavirus 45
Query: 3 KVDGVTHA 10
+ DGV+HA
Sbjct: 41 EADGVSHA 48
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 DCKVDGVT 8
D +VDG T
Sbjct: 588 DLRVDGAT 595
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 KVDGVTH 9
K+DGVT+
Sbjct: 1860 KLDGVTY 1866
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 KVDGVTH 9
K+DGVT+
Sbjct: 1860 KLDGVTY 1866
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 1 DCKVDGV 7
DC DG+
Sbjct: 76 DCAYDGI 82
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 2 CKVDGVTHA 10
CK VTH
Sbjct: 212 CKFPSVTHG 220
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 CKVDG 6
CK+DG
Sbjct: 1417 CKLDG 1421
>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 VDGVTH 9
VDG+ H
Sbjct: 230 VDGINH 235
>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 4 VDGVTH 9
VDG+ H
Sbjct: 230 VDGINH 235
>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 VDGVTH 9
VDG+ H
Sbjct: 230 VDGINH 235
>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 VDGVTH 9
VDG+ H
Sbjct: 230 VDGINH 235
>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 VDGVTH 9
VDG+ H
Sbjct: 230 VDGINH 235
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 4 VDGVTH 9
VDG+ H
Sbjct: 230 VDGINH 235
>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 4 VDGVTH 9
VDG+ H
Sbjct: 230 VDGINH 235
>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 4 VDGVTH 9
VDG+ H
Sbjct: 230 VDGINH 235
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 VDGVTH 9
VDGVT+
Sbjct: 381 VDGVTY 386
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 1 DCKVDGVT 8
DC V G T
Sbjct: 114 DCVVTGAT 121
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 DCKVDGVT 8
DC V G T
Sbjct: 115 DCVVTGAT 122
57|SequenceR|290|281|CSVEMDCKVD
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 CSVEMDCKV 9
C +E+DC V
Sbjct: 272 CDIEVDCDV 280
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 CSVEMDCKV 9
C +E+DC V
Sbjct: 272 CDIEVDCDV 280
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 2 SVEMDCK 8
+V MDCK
Sbjct: 145 NVSMDCK 151
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VEMDCKVD 10
VE++C +D
Sbjct: 216 VELECDID 223
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 4 EMDCKVD 10
E DCKVD
Sbjct: 296 ESDCKVD 302
>sp|SEMA_VAR67|SEMAPHORIN-LIKE protein A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 VEMDCKVD 10
VE++C +D
Sbjct: 74 VELECDID 81
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 CSVEMDC 7
C ++ DC
Sbjct: 451 CGIQFDC 457
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 CSVEMDC 7
C ++ DC
Sbjct: 451 CGIQFDC 457
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 CSVEMDCK 8
C VE +C+
Sbjct: 199 CQVEPNCR 206
>sp|U150A_HCMVM|UNCHARACTERIZED protein UL150A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CSVEMDCK 8
CS+EM C+
Sbjct: 258 CSMEMACE 265
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 1 CSVEMDC 7
C++E++C
Sbjct: 17 CALELEC 23
58|SequenceR|295|286|TYGDPCSVEM
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 TYGDPCSVE 9
T GDPC++E
Sbjct: 651 TRGDPCNLE 659
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 99 SYNDPCSLQ 107
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 103 SYSDPCSLK 111
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 103 SYSDPCSLK 111
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 103 SYSDPCSLK 111
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 103 SYSDPCSLK 111
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 103 SYSDPCSLK 111
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 TYGDPCSVE 9
+Y DPC+++
Sbjct: 101 SYSDPCAIQ 109
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 TYGDPCSVE 9
+Y DPCS++
Sbjct: 103 SYSDPCSLK 111
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 TYGDPCSVE 9
+Y DPC+++
Sbjct: 103 SYSDPCAIQ 111
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 3 GDPCSVE 9
G+PCS++
Sbjct: 535 GNPCSID 541
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 3 GDPCSVE 9
G+PCS++
Sbjct: 536 GNPCSID 542
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 GDPCSVE 9
G+PCS++
Sbjct: 528 GNPCSID 534
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GDPCSVE 9
GDPC +E
Sbjct: 463 GDPCWLE 469
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GDPCSVE 9
GDPC +E
Sbjct: 448 GDPCWLE 454
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 TYGDPC 6
TYGD C
Sbjct: 1551 TYGDDC 1556
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 TYGDPC 6
TYGD C
Sbjct: 1550 TYGDDC 1555
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 TYGDPC 6
TYGD C
Sbjct: 1550 TYGDDC 1555
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 YGDPCSVEM 10
Y D CSV++
Sbjct: 1128 YEDMCSVDL 1136
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 GDPCS 7
GDPC+
Sbjct: 2091 GDPCA 2095
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 3 GDPC 6
GDPC
Sbjct: 446 GDPC 449
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 1 TYGDPCSVEM 10
TY D CS M
Sbjct: 199 TYSDICSKHM 208
Query: 2 YGDPCS 7
+G+PCS
Sbjct: 86 HGEPCS 91
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 5 PCSVEM 10
PC+VE+
Sbjct: 198 PCTVEL 203
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 TYGDPCSVEM 10
TY DP + E+
Sbjct: 1976 TYSDPANHEV 1985
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 TYGDPCSVEM 10
TY DP + E+
Sbjct: 1976 TYSDPANHEV 1985
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 5 PCSVEM 10
PC+VE+
Sbjct: 198 PCTVEL 203
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 TYGDPCSVE 9
TYGD C E
Sbjct: 211 TYGDLCGGE 219
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 3 GDPC 6
GDPC
Sbjct: 563 GDPC 566
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TYGDPCSVEM 10
TY D CS M
Sbjct: 199 TYSDICSKHM 208
Query: 2 YGDPCS 7
+G+PCS
Sbjct: 86 HGEPCS 91
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 1 TYGDPCSVEM 10
TY D CS M
Sbjct: 199 TYSDICSKHM 208
Query: 2 YGDPCS 7
+G+PCS
Sbjct: 86 HGEPCS 91
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TYGDPCSVEM 10
TY D CS M
Sbjct: 199 TYSDICSKHM 208
Query: 2 YGDPCS 7
+G+PCS
Sbjct: 86 HGEPCS 91
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 1 TYGDPCSVEM 10
TY D CS M
Sbjct: 199 TYSDICSKHM 208
Query: 2 YGDPCS 7
+G+PCS
Sbjct: 86 HGEPCS 91
>sp|PG031_VAR67|PROTEIN C4|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 DPCSV 8
DPC+V
Sbjct: 297 DPCTV 301
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GDPCSVE 9
G PCS E
Sbjct: 594 GAPCSSE 600
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GDPCSVE 9
G PCS E
Sbjct: 594 GAPCSSE 600
>sp|PG031_VACCC|PROTEIN C4|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 DPCSV 8
DPC+V
Sbjct: 297 DPCTV 301
>sp|ICP47_HHV2H|ICP47 protein|Human herpesvirus 2 (strain HG52)
Query: 1 TYGDPCS 7
TYGD C+
Sbjct: 21 TYGDVCA 27
>sp|PG031_MONPV|PROTEIN OPG031|Monkeypox virus (MPXV)
Query: 4 DPCSV 8
DPC+V
Sbjct: 297 DPCTV 301
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 TYGDPCSVEM 10
TY D ++EM
Sbjct: 356 TYSDNVNMEM 365
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TYGDPCSVE 9
TY DP +++
Sbjct: 2074 TYSDPLALK 2082
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TYGDPCSVE 9
TY DP +++
Sbjct: 2074 TYSDPLALK 2082
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TYGDPCSVE 9
TY DP +++
Sbjct: 2074 TYSDPLALK 2082
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TYGDPCSVE 9
TY DP +++
Sbjct: 2074 TYSDPLALK 2082
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 TYGDPCSVE 9
TY DP +++
Sbjct: 2074 TYSDPLALK 2082
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 2 YGDPC 6
YGD C
Sbjct: 251 YGDAC 255
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 2 YGDPC 6
YGDP
Sbjct: 389 YGDPA 393
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 2 YGDPC 6
YGD C
Sbjct: 242 YGDAC 246
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 2 YGDPC 6
YGD C
Sbjct: 243 YGDAC 247
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 2 YGDPC 6
YGD C
Sbjct: 242 YGDAC 246
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 YGDPC 6
YGD C
Sbjct: 242 YGDSC 246
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 2 YGDPC 6
YGD C
Sbjct: 243 YGDAC 247
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 TYGDPCSVEM 10
+ GD C+V++
Sbjct: 186 SMGDSCTVKV 195
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 YGDPC 6
YGD C
Sbjct: 242 YGDSC 246
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 YGDPC 6
YGD C
Sbjct: 271 YGDSC 275
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 2 YGDPC 6
YGD C
Sbjct: 243 YGDAC 247
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 DPCSVE 9
D CSVE
Sbjct: 3469 DKCSVE 3474
59|SequenceR|300|291|QLRCCTYGDP
>sp|VTF3L_VACCT|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Tian Tan)
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VTF3L_VACCA|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Ankara)
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VTF3L_MONPZ|INTERMEDIATE transcription factor 3 large|Monkeypox virus (strain
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VITF3_VARV|INTERMEDIATE transcription factor 3 large|Variola virus
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VITF3_VAR67|INTERMEDIATE transcription factor 3 large|Variola virus (isolate
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VITF3_VACCC|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Copenhagen)
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|VITF3_MONPV|INTERMEDIATE transcription factor 3 large|Monkeypox virus (MPXV)
Query: 1 QLRCCTYGD 9
Q++CC Y D
Sbjct: 88 QVKCCHYFD 96
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 LRCCT 6
LRCCT
Sbjct: 1433 LRCCT 1437
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 LRCCT 6
LRCCT
Sbjct: 1347 LRCCT 1351
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 CCTYGD 9
CC YG+
Sbjct: 101 CCAYGE 106
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 2 LRCCTYGD 9
+RCCT D
Sbjct: 521 VRCCTGND 528
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 2 LRCCTYGD 9
+RCCT D
Sbjct: 521 VRCCTGND 528
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QLRCCTYGDP 10
Q R TY DP
Sbjct: 477 QSRLVTYSDP 486
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QLRCCTYGDP 10
Q R TY DP
Sbjct: 477 QSRLVTYSDP 486
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CCTYGD 9
CC++GD
Sbjct: 5048 CCSHGD 5053
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CCTYGD 9
CC++GD
Sbjct: 5068 CCSHGD 5073
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CCTYGD 9
CC++GD
Sbjct: 5098 CCSHGD 5103
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 LRCCT 6
LRCCT
Sbjct: 6358 LRCCT 6362
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 352 RCPTQGEP 359
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 352 RCPTQGEP 359
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 352 RCPTQGEP 359
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 352 RCPTQGEP 359
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 352 RCPTQGEP 359
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 73 RCPTQGEP 80
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 353 RCPTQGEP 360
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 353 RCPTQGEP 360
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 353 RCPTQGEP 360
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 353 RCPTQGEP 360
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 353 RCPTQGEP 360
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 353 RCPTQGEP 360
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 353 RCPTQGEP 360
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 73 RCPTQGEP 80
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 73 RCPTLGEP 80
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 253 RCPTQGEP 260
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RCCTYGDP 10
RC T G+P
Sbjct: 353 RCPTQGEP 360
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 LRCCTYGD 9
L CC Y D
Sbjct: 43 LDCCQYTD 50
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 LRCCTYG 8
L CCT G
Sbjct: 272 LTCCTRG 278
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 LRCCTYG 8
L CCT G
Sbjct: 272 LTCCTRG 278
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 LRCCTYG 8
L CCT G
Sbjct: 263 LTCCTRG 269
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 5 CTYGDP 10
C++GDP
Sbjct: 873 CSFGDP 878
>sp|UL67_HCMVA|UNCHARACTERIZED protein UL67|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RCCTYGD 9
RC +Y D
Sbjct: 92 RCASYND 98
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 RCCTYGD 9
RC YG+
Sbjct: 3385 RCSAYGE 3391
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 LRCCT 6
L+CCT
Sbjct: 6387 LKCCT 6391
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 5 CTYGDP 10
C +GDP
Sbjct: 871 CVFGDP 876
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 4 CCTYGD 9
CC +GD
Sbjct: 31 CCLFGD 36
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 RCCTYGD 9
RC T+G+
Sbjct: 895 RCMTWGE 901
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 RCCTYGD 9
RC T+G+
Sbjct: 895 RCMTWGE 901
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 RCCTYGDP 10
RC GDP
Sbjct: 18 RCNDSGDP 25
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 5 CTYGDP 10
CT+G P
Sbjct: 1639 CTFGAP 1644
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 1 QLRCCTY 7
+L+CC Y
Sbjct: 246 RLKCCRY 252
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 LRCCTY 7
L CC Y
Sbjct: 132 LSCCNY 137
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 LRCCTY 7
L CC Y
Sbjct: 132 LSCCNY 137
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 CTYGDP 10
CT+G P
Sbjct: 1639 CTFGAP 1644
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 LRCCTY 7
L CC Y
Sbjct: 132 LSCCNY 137
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 CCTYGDP 10
C T+G P
Sbjct: 1977 CITFGKP 1983
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 5 CTYGDP 10
C +GDP
Sbjct: 871 CVFGDP 876
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 5 CTYGDP 10
C +GDP
Sbjct: 867 CQFGDP 872
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 5 CTYGDP 10
C +GDP
Sbjct: 866 CQFGDP 871
>sp|YVAU_VACCC|UNCHARACTERIZED 8.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RCCTY 7
RCCTY
Sbjct: 20 RCCTY 24
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 1 QLRCCTY 7
+L+CC Y
Sbjct: 301 RLKCCRY 307
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 5 CTYGDP 10
C +GDP
Sbjct: 867 CQFGDP 872
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 5 CTYGDP 10
C +GDP
Sbjct: 877 CQFGDP 882
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 5 CTYGDP 10
C +GDP
Sbjct: 867 CQFGDP 872
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 CCTYGDP 10
C T+G P
Sbjct: 1977 CITFGKP 1983
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 CTYGDP 10
C +GDP
Sbjct: 877 CQFGDP 882
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 5 CTYGDP 10
C +GDP
Sbjct: 877 CQFGDP 882
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 CTYGDP 10
C +GDP
Sbjct: 877 CQFGDP 882
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 5 CTYGDP 10
C +GDP
Sbjct: 870 CAFGDP 875
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LRCCTY 7
L CC Y
Sbjct: 465 LLCCNY 470
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LRCCTY 7
L CC Y
Sbjct: 465 LLCCNY 470
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 2 LRCCTY 7
L CC Y
Sbjct: 465 LLCCNY 470
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 CTYGDP 10
C +GDP
Sbjct: 872 CQFGDP 877
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 LRCCTY 7
L CC Y
Sbjct: 132 LSCCNY 137
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 LRCCTY 7
L CC Y
Sbjct: 132 LSCCNY 137
>sp|E3B14_ADE03|EARLY E3B 14.5 kDa protein|Human adenovirus B serotype 3
Query: 1 QLRCCTYGDP 10
QLR C + P
Sbjct: 29 QLRKCKFQQP 38
>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 LRCCTY 7
L CC Y
Sbjct: 132 LSCCNY 137
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 LRCCTY 7
L CC Y
Sbjct: 132 LSCCNY 137
60|SequenceR|305|296|GWAGSQLRCC
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GWAGSQLRC 9
GW GSQ C
Sbjct: 762 GWKGSQSIC 770
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 WAGSQLRC 9
W+G +L+C
Sbjct: 782 WSGKELKC 789
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 WAGSQLRC 9
W+G +L+C
Sbjct: 782 WSGKELKC 789
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 GWAGSQLRCC 10
G +GS RCC
Sbjct: 1037 GHSGSTFRCC 1046
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 WAGSQLRC 9
W+G +L+C
Sbjct: 782 WSGKELKC 789
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 WAGSQLRC 9
W+G +L+C
Sbjct: 782 WSGKELKC 789
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 GWAGSQLRCC 10
G +GS RCC
Sbjct: 1042 GHSGSTFRCC 1051
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 782 WTGKELKC 789
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 781 WKGKELKC 788
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 781 WKGKELKC 788
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 781 WKGKELKC 788
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 781 WKGKELKC 788
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 781 WKGKELKC 788
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 GWAGSQLR 8
GW SQ+R
Sbjct: 1814 GWVASQIR 1821
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 WAGSQLRC 9
W G ++RC
Sbjct: 211 WFGQKVRC 218
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1035 GHSGSSFKCC 1044
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1036 GHSGSSFKCC 1045
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1035 GHSGSSFKCC 1044
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 782 WKGRELKC 789
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 783 WKGRELKC 790
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1035 GHSGSSFKCC 1044
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 783 WKGRELKC 790
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1036 GHSGSTFKCC 1045
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1037 GHSGSTFKCC 1046
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 783 WKGKELKC 790
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1039 GHSGSSFKCC 1048
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WAGSQLRC 9
W G +L+C
Sbjct: 783 WKGKELKC 790
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 WAGSQLRCC 10
W G + CC
Sbjct: 258 WTGFKSSCC 266
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 WAGSQLRCC 10
W G + CC
Sbjct: 258 WTGFKSSCC 266
>sp|VE6_HPV56|PROTEIN E6|Human papillomavirus 56
Query: 1 GWAGSQLRC 9
GW GS L C
Sbjct: 134 GWTGSCLGC 142
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AGSQLRCC 10
A S+L CC
Sbjct: 90 AASKLICC 97
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AGSQLRCC 10
A S+L CC
Sbjct: 90 AASKLICC 97
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1040 GHSGSLFKCC 1049
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 2 WAGSQLRC 9
+ GSQ RC
Sbjct: 375 YRGSQKRC 382
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 GWAGSQLRCC 10
G +GS +CC
Sbjct: 1040 GHSGSLFKCC 1049
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 GWAGSQLRCC 10
G +GS+ CC
Sbjct: 1041 GHSGSKFMCC 1050
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 GWAGSQLRCC 10
G +GS+ CC
Sbjct: 1046 GHSGSKFMCC 1055
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 1 GWAGSQLRCC 10
G +GS+ CC
Sbjct: 134 GHSGSKFMCC 143
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 GWAGSQLRCC 10
G +GS+ CC
Sbjct: 1046 GHSGSKFMCC 1055
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 GWAGSQLRCC 10
G +GS+ CC
Sbjct: 1046 GHSGSKFMCC 1055
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 GWAGSQLRCC 10
G +GS+ CC
Sbjct: 1046 GHSGSKFMCC 1055
>sp|GM_HHV7J|ENVELOPE glycoprotein M|Human herpesvirus 7 (strain JI)
Query: 2 WAGSQLRC 9
W G L C
Sbjct: 120 WMGDSLSC 127
>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 WAGSQLRC 9
W+G L C
Sbjct: 178 WSGLSLHC 185
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 GWAGSQLRCC 10
GW+G RCC
Sbjct: 291 GWSGVCGRCC 300
>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain
Query: 2 WAGSQLRC 9
W+G L C
Sbjct: 178 WSGLSLHC 185
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 GWAGSQL 7
GW SQL
Sbjct: 1818 GWVASQL 1824
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 1 GWAGSQLRCC 10
G +GS+ CC
Sbjct: 231 GHSGSKFMCC 240
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 GWAGSQL 7
GW SQL
Sbjct: 1816 GWVASQL 1822
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GWAGSQL 7
GW SQL
Sbjct: 1812 GWVASQL 1818
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 GWAGSQL 7
GW SQL
Sbjct: 1815 GWVASQL 1821
>sp|VE6_HPV66|PROTEIN E6|Human papillomavirus 66
Query: 1 GWAGSQLRC 9
W GS L+C
Sbjct: 134 AWTGSCLQC 142
>sp|VE6_HPV16|PROTEIN E6|Human papillomavirus type 16
Query: 2 WAGSQLRCC 10
W G + CC
Sbjct: 139 WTGRCMSCC 147
61|SequenceR|310|301|TFPCCGWAGS
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 4 CCGW 7
CCGW
Sbjct: 14 CCGW 17
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 PCCG 6
PCCG
Sbjct: 208 PCCG 211
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CCGW 7
CCGW
Sbjct: 343 CCGW 346
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PCCGW 7
PC GW
Sbjct: 13 PCYGW 17
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 3 PCCGW 7
PC GW
Sbjct: 13 PCYGW 17
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 PCCGW 7
P CGW
Sbjct: 2855 PLCGW 2859
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CCGW 7
CCGW
Sbjct: 343 CCGW 346
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CCGW 7
CCGW
Sbjct: 343 CCGW 346
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CCGW 7
CCGW
Sbjct: 343 CCGW 346
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3255 PGCGWS 3260
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3254 PGCGWS 3259
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3254 PGCGWS 3259
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3254 PGCGWS 3259
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3254 PGCGWS 3259
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3254 PGCGWS 3259
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3256 PGCGWS 3261
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3254 PGCGWS 3259
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 PCCGWA 8
P CGW+
Sbjct: 3256 PGCGWS 3261
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 4 CCGWA 8
CC WA
Sbjct: 417 CCLWA 421
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 4 CCGWA 8
CC WA
Sbjct: 416 CCLWA 420
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 CCGWA 8
CC WA
Sbjct: 418 CCLWA 422
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 CCGWA 8
CC WA
Sbjct: 418 CCLWA 422
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 CCGWA 8
CC WA
Sbjct: 418 CCLWA 422
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 4 CCGWA 8
CC WA
Sbjct: 418 CCLWA 422
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 4 CCGWA 8
CC WA
Sbjct: 417 CCLWA 421
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 CCGWA 8
CC WA
Sbjct: 418 CCLWA 422
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 CCGWA 8
CC WA
Sbjct: 419 CCLWA 423
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 4 CCGWA 8
CC WA
Sbjct: 418 CCLWA 422
>sp|YL15_ADE41|UNCHARACTERIZED 12.4 kDa protein in|Human adenovirus F serotype 41
Query: 1 TFPCCGW 7
TFP GW
Sbjct: 22 TFPVGGW 28
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 2 FPCC 5
FPCC
Sbjct: 156 FPCC 159
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 2 FPCC 5
FPCC
Sbjct: 156 FPCC 159
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CGWAG 9
CGW G
Sbjct: 84 CGWNG 88
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 3 PCCGWA 8
P C WA
Sbjct: 114 PNCNWA 119
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 3 PCCGWA 8
P C WA
Sbjct: 114 PNCNWA 119
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 3 PCCGWA 8
P C WA
Sbjct: 114 PNCNWA 119
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 3 PCCGWA 8
P C WA
Sbjct: 114 PNCNWA 119
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 3 PCCGWA 8
P C WA
Sbjct: 114 PNCNWA 119
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 PCCGWAG 9
PC W+G
Sbjct: 605 PCNTWSG 611
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 PCCGWAG 9
PC W+G
Sbjct: 605 PCNTWSG 611
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 3 PCCGWAG 9
PC W+G
Sbjct: 605 PCNTWSG 611
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 5 CGWAG 9
CGWAG
Sbjct: 91 CGWAG 95
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 3 PCCGWA 8
P C WA
Sbjct: 114 PNCDWA 119
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 GWAGS 10
GWAG+
Sbjct: 241 GWAGT 245
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 2 FPCCGWAGS 10
F C GW+ +
Sbjct: 171 FICVGWSST 179
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 FPCCG 6
FPC G
Sbjct: 806 FPCAG 810
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 FPCCG 6
FPC G
Sbjct: 806 FPCAG 810
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 1 TFPCCGW 7
T P C W
Sbjct: 280 TMPWCMW 286
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 1 TFPCCGW 7
T P C W
Sbjct: 280 TMPWCMW 286
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 1 TFPCCGW 7
T P C W
Sbjct: 280 TMPWCMW 286
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 FPCCG 6
FPC G
Sbjct: 806 FPCAG 810
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 FPCCG 6
FPC G
Sbjct: 806 FPCAG 810
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 FPCCG 6
FPC G
Sbjct: 806 FPCAG 810
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 FPCCG 6
FPC G
Sbjct: 806 FPCAG 810
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 2 FPCCGWAGS 10
F C GW+ +
Sbjct: 171 FICVGWSST 179
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 FPCCGWAGS 10
F C GW+ +
Sbjct: 172 FLCVGWSST 180
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 5 CGWAGS 10
C WAGS
Sbjct: 648 CRWAGS 653
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 FPCCGW 7
F C GW
Sbjct: 211 FMCKGW 216
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 FPCCGW 7
F C GW
Sbjct: 211 FMCKGW 216
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 2 FPCCGWAGS 10
F C GW+ +
Sbjct: 173 FICVGWSST 181
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 2 FPCCGWAGS 10
F C GW+ +
Sbjct: 173 FICVGWSST 181
62|SequenceR|315|306|CCVAQTFPCC
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 3 VAQTFPC 9
VAQ PC
Sbjct: 1040 VAQALPC 1046
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 3 VAQTFPC 9
VAQ PC
Sbjct: 1038 VAQALPC 1044
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 CCVAQTFP 8
CC A T P
Sbjct: 1089 CCRACTMP 1096
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 CCVAQTFP 8
CC A T P
Sbjct: 1089 CCRACTMP 1096
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 CCVAQTFP 8
CC A T P
Sbjct: 1089 CCRACTMP 1096
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 CCVAQTFP 8
CC A T P
Sbjct: 1089 CCRACTMP 1096
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 3 VAQTFPC 9
VAQ PC
Sbjct: 1033 VAQALPC 1039
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 CVAQTFPC 9
C+ Q PC
Sbjct: 1188 CILQKAPC 1195
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 CCVAQTFP 8
CC + T P
Sbjct: 1087 CCRSSTIP 1094
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 5 QTFPC 9
Q+FPC
Sbjct: 140 QSFPC 144
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVAQTFPC 9
CV TF C
Sbjct: 119 CVQMTFLC 126
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 CCVAQTFPC 9
CC+ PC
Sbjct: 556 CCMKGAEPC 564
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 CCVAQTFPC 9
CC+ PC
Sbjct: 556 CCMKGAEPC 564
>sp|YHL4_HCMVA|UNCHARACTERIZED protein HHLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CVAQTFP 8
VAQ+FP
Sbjct: 37 TVAQSFP 43
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 CCVAQTFPCC 10
CC CC
Sbjct: 1379 CCPVNFKKCC 1388
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 CCVAQTFPCC 10
CC CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CCVAQTFPCC 10
CC CC
Sbjct: 1389 CCPVNFKKCC 1398
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 CCVAQTFPCC 10
CC CC
Sbjct: 1375 CCPVNFKKCC 1384
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 CCVAQTFPCC 10
CC CC
Sbjct: 1371 CCPVNFKKCC 1380
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 CCVAQTFPCC 10
CC CC
Sbjct: 1384 CCPVNFKKCC 1393
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 CCVAQTFPCC 10
CC CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 CCVAQTFPCC 10
CC CC
Sbjct: 1370 CCPVNFKKCC 1379
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 CCVAQTFPCC 10
CC CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 CCVAQTFPCC 10
CC CC
Sbjct: 1381 CCPVNFKKCC 1390
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 CCVAQTFPCC 10
CC CC
Sbjct: 1373 CCPVNFKKCC 1382
63|SequenceR|320|311|HIHDECCVAQ
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 HIHDECCVAQ 10
HI DECC+ +
Sbjct: 1366 HIEDECCIKE 1375
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 HIHDECCVAQ 10
H+ D CCV +
Sbjct: 1423 HVRDNCCVKE 1432
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 HIHDECCVAQ 10
H+ D CCV +
Sbjct: 1423 HVKDNCCVKE 1432
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 HIHDECCV 8
H+ +CCV
Sbjct: 1364 HVETDCCV 1371
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 HIHDECCV 8
H+ +CCV
Sbjct: 1364 HVETDCCV 1371
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 HIHDECCV 8
H+ +CCV
Sbjct: 1364 HVETDCCV 1371
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 IHDECCV 8
IHD C V
Sbjct: 1540 IHDNCAV 1546
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 IHDECCV 8
IHD CV
Sbjct: 1567 IHDRVCV 1573
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 IHDECCV 8
IHD CV
Sbjct: 1566 IHDRICV 1572
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 IHDECC 7
IH+ CC
Sbjct: 1081 IHEWCC 1086
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 IHDECC 7
IH+ CC
Sbjct: 1081 IHEWCC 1086
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 IHDECC 7
IH+ CC
Sbjct: 1081 IHEWCC 1086
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 IHDECC 7
IH+ CC
Sbjct: 1081 IHEWCC 1086
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 IHDECC 7
IH+ CC
Sbjct: 1081 IHEWCC 1086
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 IHDECC 7
IH+ CC
Sbjct: 1083 IHEWCC 1088
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 IHDECC 7
IH+ CC
Sbjct: 1082 IHEWCC 1087
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 IHDECC 7
IH+ CC
Sbjct: 1083 IHEWCC 1088
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 HDECCV 8
HDE C+
Sbjct: 4365 HDEMCI 4370
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain
Query: 1 HIHDEC 6
HI+D C
Sbjct: 16 HINDTC 21
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 HIHDECCVAQ 10
++H E C++Q
Sbjct: 751 YLHLEDCISQ 760
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 IHDECCV 8
+ ECCV
Sbjct: 66 LKQECCV 72
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 IHDECCV 8
+ ECCV
Sbjct: 66 LKQECCV 72
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HIHDECC 7
++H CC
Sbjct: 125 YVHRRCC 131
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 3 HDECCVAQ 10
HDE C Q
Sbjct: 1029 HDEHCTGQ 1036
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HIHDECC 7
++H CC
Sbjct: 125 YVHRRCC 131
64|SequenceR|325|316|GAPCCHIHDE
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 3 PCCHIHDE 10
PCC +HD+
Sbjct: 443 PCCFLHDQ 450
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PCCHI 7
PCCH+
Sbjct: 27 PCCHV 31
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PCCHI 7
PCCH+
Sbjct: 27 PCCHV 31
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PCCHI 7
PCCH+
Sbjct: 27 PCCHV 31
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 GAPCCHIH 8
GAP CHI+
Sbjct: 566 GAPPCHIY 573
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GAPCCHI 7
GAP CHI
Sbjct: 566 GAPPCHI 572
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 GAPCCHIH 8
G PC +IH
Sbjct: 2091 GDPCANIH 2098
>sp|SLFN_VACCC|SCHLAFEN-LIKE protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GAPCCHIH 8
G CC++H
Sbjct: 23 GKECCYVH 30
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GAPCC 5
G PCC
Sbjct: 4267 GVPCC 4271
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 APCCHI 7
A CCH+
Sbjct: 3229 AACCHL 3234
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 APCCHI 7
A CCH+
Sbjct: 3229 AACCHL 3234
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 APCCHI 7
A CCH+
Sbjct: 3206 AACCHL 3211
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 APCCHI 7
A CCH+
Sbjct: 3206 AACCHL 3211
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 3 PCCHIHD 9
PCC I D
Sbjct: 190 PCCQITD 196
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GAPCCHI 7
GAP C+I
Sbjct: 565 GAPACNI 571
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 PCCHIHDE 10
PC HI E
Sbjct: 355 PCIHIPGE 362
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 PCCHIHDE 10
PC HI E
Sbjct: 355 PCIHIPGE 362
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 PCCHIHDE 10
PC HI E
Sbjct: 355 PCIHIPGE 362
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 GAPCC 5
G PCC
Sbjct: 528 GNPCC 532
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 GAPCC 5
G PCC
Sbjct: 532 GNPCC 536
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GAPCCHIHDE 10
GAP C+I+ +
Sbjct: 566 GAPPCNIYGD 575
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 GAPCCHIH 8
GAP C+I+
Sbjct: 567 GAPPCNIY 574
>sp|GL_HHV8P|ENVELOPE glycoprotein L|Human herpesvirus 8 type P
Query: 3 PCCHIH 8
PCC I
Sbjct: 25 PCCAIQ 30
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PCCHIHDE 10
P CHI E
Sbjct: 1189 PKCHIKGE 1196
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PCCHIHDE 10
P CHI E
Sbjct: 1187 PKCHIKGE 1194
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GAPCCHIH 8
GAP C+I+
Sbjct: 566 GAPPCNIY 573
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 2 APCCHIHDE 10
+P C IH +
Sbjct: 408 SPNCRIHSD 416
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 CCHIHDE 10
C H HD+
Sbjct: 60 CTHNHDD 66
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 GAPCCHI 7
GAP HI
Sbjct: 550 GAPLAHI 556
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GAPCCHI 7
GAP C++
Sbjct: 565 GAPACNV 571
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 GAPCCHIHD 9
G C H++D
Sbjct: 106 GLQCYHVYD 114
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 4 CCHIHDE 10
C H HD+
Sbjct: 60 CIHNHDD 66
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 APCCHIH 8
A C HIH
Sbjct: 150 AGCMHIH 156
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 APCCHIH 8
A C HIH
Sbjct: 150 AGCMHIH 156
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GAPCCHIHDE 10
GAP C I +
Sbjct: 567 GAPPCRIRKD 576
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GAPCCHIHDE 10
GAP C I +
Sbjct: 567 GAPPCRIRKD 576
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 GAPCCHI 7
GAP C+I
Sbjct: 565 GAPPCNI 571
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 CCHIHD 9
CC ++D
Sbjct: 389 CCTVYD 394
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 CCHIHD 9
CC ++D
Sbjct: 389 CCTVYD 394
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 GAPCCHIHDE 10
GAP C I +
Sbjct: 567 GAPPCRIRKD 576
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GAPCCHI 7
GAP C I
Sbjct: 566 GAPPCQI 572
>sp|UL41_HCMVA|UNCHARACTERIZED protein UL41|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PCCHIHD 9
PC +HD
Sbjct: 116 PCLRLHD 122
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 CCHIHD 9
CC ++D
Sbjct: 389 CCTVYD 394
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GAPCCHI 7
GAP C I
Sbjct: 565 GAPPCQI 571
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CCHIHD 9
CC ++D
Sbjct: 389 CCTVYD 394
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CCHIHD 9
CC ++D
Sbjct: 389 CCTVYD 394
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 GAPCCHI 7
GAP C I
Sbjct: 567 GAPPCRI 573
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GAPCCHI 7
GAP C I
Sbjct: 567 GAPPCRI 573
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CCHIHD 9
CC ++D
Sbjct: 389 CCTVYD 394
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 GAPCCHIH 8
GAP H H
Sbjct: 35 GAPLAHGH 42
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 GAPCCHI 7
GAP C I
Sbjct: 565 GAPPCRI 571
65|SequenceR|330|321|TDCTFGAPCC
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 DCTFGAP 8
+CTFGAP
Sbjct: 1638 NCTFGAP 1644
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 DCTFGAP 8
+CTFGAP
Sbjct: 1638 NCTFGAP 1644
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 CTFGAPCC 10
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 CTFGAPCC 10
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 CTFGAPCC 10
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 CTFGAPCC 10
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 4 TFGAPCC 10
TFG P C
Sbjct: 159 TFGYPSC 165
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DCTFGA 7
+CTFGA
Sbjct: 306 ECTFGA 311
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 1 TDCTFGAPCC 10
+DC P C
Sbjct: 364 SDCVRSVPVC 373
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 1 TDCTFGAPCC 10
+DC P C
Sbjct: 364 SDCVRSVPVC 373
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 4 TFGAPCC 10
T+G P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 4 TFGAPCC 10
T+G P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 4 TFGAPCC 10
T+G P C
Sbjct: 160 TYGYPAC 166
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 2 DCTFGAPCC 10
D FG P C
Sbjct: 72 DVAFGRPKC 80
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 CTFGAPCC 10
C FGAP
Sbjct: 454 CGFGAPLL 461
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 CTFGAPCC 10
C FGAP
Sbjct: 454 CGFGAPLL 461
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 4 TFGAPCC 10
TF AP C
Sbjct: 20 TFNAPEC 26
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 TDCTFGAP 8
T C+FG P
Sbjct: 871 TTCSFGDP 878
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 TDCTFGAP 8
T C FG P
Sbjct: 869 TSCVFGDP 876
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 TDCTFGAP 8
T C FG P
Sbjct: 869 TSCVFGDP 876
66|SequenceR|335|326|CTGKQTDCTF
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 GKQTDCTF 10
GK+TD +F
Sbjct: 1704 GKETDVSF 1711
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 GKQTDCTF 10
GK+TD +F
Sbjct: 1703 GKETDVSF 1710
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 GKQTDCTF 10
GK+TD +F
Sbjct: 1703 GKETDVSF 1710
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 3 GKQTDCTF 10
GK+TD +F
Sbjct: 1703 GKETDVSF 1710
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 GKQTDCTF 10
GK+TD +F
Sbjct: 1701 GKETDVSF 1708
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 TGKQTDCTF 10
TGK +DC +
Sbjct: 1853 TGKLSDCLY 1861
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 TGKQTDCTF 10
TGK +DC +
Sbjct: 1853 TGKLSDCLY 1861
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GKQTDCT 9
GK+ DC+
Sbjct: 1442 GKELDCS 1448
>sp|ORF57_VZVO|UNCHARACTERIZED protein 57|Varicella-zoster virus (strain Oka vaccine)
Query: 2 TGKQTDC 8
TGK +DC
Sbjct: 41 TGKWSDC 47
>sp|ORF57_VZVD|UNCHARACTERIZED protein 57|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TGKQTDC 8
TGK +DC
Sbjct: 41 TGKWSDC 47
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 CTGKQTDCT 9
CT QTD +
Sbjct: 610 CTDTQTDIS 618
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 CTGKQTDCT 9
CT K+ +C+
Sbjct: 704 CTDKKPNCS 712
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 CTGKQTDC 8
CTG T+C
Sbjct: 1320 CTGCGTNC 1327
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GKQTDC 8
GK+ DC
Sbjct: 1444 GKELDC 1449
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 QTDCT 9
QTDCT
Sbjct: 61 QTDCT 65
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 5 QTDCT 9
QTDCT
Sbjct: 63 QTDCT 67
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 TGKQTD 7
TGK TD
Sbjct: 1418 TGKSTD 1423
>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CTGKQTDCTF 10
C G +TD F
Sbjct: 47 CLGLRTDLAF 56
67|SequenceR|340|331|HPGQECTGKQ
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 HPGQECTG 8
+PGQ C G
Sbjct: 1305 YPGQGCAG 1312
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 HPGQECTG 8
+PGQ C G
Sbjct: 1305 YPGQGCAG 1312
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 HPGQECTG 8
HPG C G
Sbjct: 216 HPGDVCVG 223
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 HPGQECTGK 9
HP C GK
Sbjct: 333 HPNITCAGK 341
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 4 QECTGKQ 10
Q+C GKQ
Sbjct: 464 QKCLGKQ 470
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 HPGQECTGKQ 10
H ++CTG+Q
Sbjct: 424 HQMKDCTGRQ 433
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 PGQECTG 8
PG++C+G
Sbjct: 174 PGRKCSG 180
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 PGQECTG 8
PG++C+G
Sbjct: 174 PGRKCSG 180
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 HPGQECTGKQ 10
H ++CTG+Q
Sbjct: 424 HQMKDCTGRQ 433
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 GQECT 7
GQECT
Sbjct: 478 GQECT 482
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 GQECT 7
GQECT
Sbjct: 478 GQECT 482
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 PGQEC 6
PG+EC
Sbjct: 849 PGEEC 853
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 PGQEC 6
PG+EC
Sbjct: 849 PGEEC 853
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 GQECT 7
GQECT
Sbjct: 478 GQECT 482
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 PGQECTGK 9
PG +CT K
Sbjct: 1186 PGPQCTYK 1193
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 GQECT 7
GQECT
Sbjct: 478 GQECT 482
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 GQECT 7
GQECT
Sbjct: 478 GQECT 482
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 PGQECTGK 9
PG +CT K
Sbjct: 1186 PGPQCTYK 1193
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 GQECT 7
GQECT
Sbjct: 478 GQECT 482
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 GQECT 7
GQECT
Sbjct: 478 GQECT 482
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 2 PGQECTG 8
PG+ C G
Sbjct: 553 PGERCAG 559
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 PGQECTG 8
PG +C+G
Sbjct: 174 PGGKCSG 180
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 PGQECTG 8
PG +C+G
Sbjct: 174 PGGKCSG 180
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 2 PGQECTG 8
PG C+G
Sbjct: 174 PGGNCSG 180
68|SequenceR|345|336|MWPVQHPGQE
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 2 WPVQHPGQE 10
WP+QH +E
Sbjct: 392 WPLQHIQKE 400
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 2 WPVQHPGQE 10
WP+QH +E
Sbjct: 392 WPLQHIQKE 400
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 WPVQHPGQ 9
WPV HP Q
Sbjct: 597 WPVTHPSQ 604
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 1 MWPVQHPGQE 10
+W V HP E
Sbjct: 189 IWGVHHPNDE 198
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 1 MWPVQHPGQE 10
+W + HP E
Sbjct: 191 LWGIHHPNDE 200
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 MWPVQHPGQE 10
+W V HP E
Sbjct: 179 IWGVHHPSTE 188
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 1 MWPVQHPGQE 10
+W V HP E
Sbjct: 189 IWGVHHPNDE 198
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 MWPVQHP 7
+W QHP
Sbjct: 1360 LWSEQHP 1366
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 MWPVQHP 7
+W QHP
Sbjct: 1360 LWSEQHP 1366
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 192 LWGVHHP 198
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 MWPVQHP 7
+W QHP
Sbjct: 1360 LWTEQHP 1366
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPSTD 204
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 192 LWGVHHP 198
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPSTD 204
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 192 LWGVHHP 198
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 192 LWGVHHP 198
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 179 IWGVHHPSTD 188
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPSTD 204
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 192 LWGVHHP 198
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 192 LWGVHHP 198
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPSTD 204
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPSTD 204
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 196 IWGVHHPSTD 205
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPSTD 204
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPSTD 204
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPSTD 204
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPSTD 204
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPSTD 204
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPSTD 204
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPSTD 204
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 IWGVHHP 199
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 MWPVQHPGQE 10
+W V HP +
Sbjct: 195 IWGVHHPNTD 204
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 WPVQHPG 8
W ++HPG
Sbjct: 240 WALRHPG 246
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 1 MWPVQHPGQE 10
+W V HP E
Sbjct: 189 IWGVHHPIDE 198
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 193 LWGIHHP 199
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 193 LWGIHHP 199
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 2 WPVQHP 7
W +QHP
Sbjct: 266 WDLQHP 271
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 193 LWGIHHP 199
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 193 LWGIHHP 199
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 195 IWGVHHP 201
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 195 IWGVHHP 201
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 195 IWGVHHP 201
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 2 WPVQHP 7
W +QHP
Sbjct: 266 WDLQHP 271
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 195 IWGVHHP 201
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 MWPVQHP 7
+W QHP
Sbjct: 1360 VWSEQHP 1366
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 WPVQHP 7
W VQHP
Sbjct: 214 WDVQHP 219
>sp|HEMA_I86A0|HEMAGGLUTININ A virus (strain A/Taiwan/1/1986
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 193 LWGVHHP 199
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 179 IWGVHHP 185
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 195 VWGVHHP 201
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 179 IWGVHHP 185
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 WPVQHP 7
W VQHP
Sbjct: 214 WDVQHP 219
Query: 2 WPVQHPG 8
+PVQH G
Sbjct: 135 YPVQHVG 141
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 WPVQHP 7
W VQHP
Sbjct: 214 WDVQHP 219
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 179 IWGVHHP 185
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 191 LWGIHHP 197
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 191 LWGIHHP 197
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 191 LWGIHHP 197
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 191 LWGIHHP 197
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 191 LWGIHHP 197
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 191 LWGIHHP 197
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 191 LWGIHHP 197
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 191 LWGIHHP 197
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 191 LWGIHHP 197
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 189 LWGIHHP 195
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 180 LWGIHHP 186
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 191 LWGIHHP 197
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 187 LWGIHHP 193
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 WPVQHP 7
W VQHP
Sbjct: 214 WDVQHP 219
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 180 LWGIHHP 186
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 180 LWGIHHP 186
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 191 LWGIHHP 197
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 180 LWGIHHP 186
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 WPVQHP 7
W VQHP
Sbjct: 214 WDVQHP 219
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 MWPVQHPGQE 10
+W + HP +
Sbjct: 189 IWGIHHPNDD 198
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 193 LWGIHHP 199
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 192 LWGIHHP 198
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 183 LWGIHHP 189
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 4 VQHPGQE 10
+Q+PG E
Sbjct: 233 IQYPGSE 239
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 3 PVQHPGQE 10
PV+H G E
Sbjct: 430 PVEHVGSE 437
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 3 PVQHPGQE 10
PV+H G E
Sbjct: 430 PVEHVGSE 437
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 3 PVQHPGQE 10
PV+H G E
Sbjct: 430 PVEHVGSE 437
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 3 PVQHPGQE 10
PV+H G E
Sbjct: 430 PVEHVGSE 437
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 179 IWGVHHP 185
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 195 IWGIHHP 201
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 WPVQHP 7
W VQHP
Sbjct: 214 WDVQHP 219
Query: 2 WPVQHPG 8
+PVQH G
Sbjct: 135 YPVQHVG 141
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 195 IWGIHHP 201
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 1 MWPVQHPGQE 10
+W V HP E
Sbjct: 189 IWGVHHPIDE 198
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 PVQHPGQ 9
PV+HP Q
Sbjct: 585 PVKHPSQ 591
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 1 MWPVQHP 7
+W + HP
Sbjct: 194 VWGIHHP 200
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 WPVQHPGQE 10
W V HP E
Sbjct: 1486 WIVMHPPTE 1494
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 WPVQH 6
WPV H
Sbjct: 988 WPVSH 992
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 1 MWPVQHP 7
+W V HP
Sbjct: 179 IWGVHHP 185
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VQHPGQ 9
V HPG+
Sbjct: 326 VHHPGE 331
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 4 VQHPGQ 9
V HPG+
Sbjct: 326 VHHPGE 331
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 3 PVQHPG 8
P+QHP
Sbjct: 571 PIQHPA 576
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 3 PVQHPG 8
P+QHP
Sbjct: 571 PIQHPA 576
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 3 PVQHPG 8
P+QHP
Sbjct: 571 PIQHPA 576
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 3 PVQHPG 8
P+QHP
Sbjct: 571 PIQHPA 576
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 3 PVQHPG 8
P+QHP
Sbjct: 571 PIQHPA 576
>sp|3BHS_VAR67|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Variola
Query: 4 VQHPGQE 10
+Q+PG E
Sbjct: 115 IQYPGSE 121
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 WPVQHPGQ 9
WP + PG+
Sbjct: 1238 WPEEQPGE 1245
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 WPVQHPGQ 9
WP + PG+
Sbjct: 1238 WPEEQPGE 1245
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 5 QHPGQE 10
QHPG++
Sbjct: 84 QHPGED 89
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 5 QHPGQE 10
QHPG++
Sbjct: 84 QHPGED 89
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 WPVQHPG 8
W ++ PG
Sbjct: 99 WTIEEPG 105
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 WPVQHPG 8
W V++PG
Sbjct: 181 WIVRNPG 187
69|SequenceR|350|341|APAKEMWPVQ
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 APAKEMWPV 9
APA E WP+
Sbjct: 49 APATERWPL 57
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 APAKEMWPV 9
APA WP+
Sbjct: 67 APATLRWPL 75
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 APAKEMWPV 9
APA WP+
Sbjct: 67 APATLRWPL 75
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 APAKEMW 7
+PA+++W
Sbjct: 239 SPAQDIW 245
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PAKEMWPVQ 10
P KE+W V
Sbjct: 859 PQKEIWTVN 867
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PAKEMWPVQ 10
P KE+W V
Sbjct: 859 PQKEIWTVN 867
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PAKEMWPVQ 10
P KE+W V
Sbjct: 857 PQKEIWTVN 865
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PAKEMWPVQ 10
P KE+W V
Sbjct: 857 PEKEVWTVN 865
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PAKEMWPVQ 10
P KE+W V
Sbjct: 858 PEKEVWTVN 866
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PAKEMWPVQ 10
P KE+W V
Sbjct: 858 PQKEVWTVN 866
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PAKEMWPVQ 10
P KE+W V
Sbjct: 858 PQKEVWTVN 866
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PAKEMWPVQ 10
P KE+W V
Sbjct: 857 PQKEVWTVN 865
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PAKEMWPVQ 10
P KE+W V
Sbjct: 858 PQKEVWTVN 866
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PAKEMWPVQ 10
P KE+W V
Sbjct: 856 PQKEVWTVN 864
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PAKEMWPVQ 10
P KE+W V
Sbjct: 856 PEKEVWTVN 864
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PAKEMWPVQ 10
P KE+W V
Sbjct: 844 PEKEVWTVN 852
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PAKEMWPV 9
P KE+W V
Sbjct: 835 PDKEVWTV 842
70|SequenceR|355|346|PLSLHAPAKE
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LSLHAPAKE 10
L+LH PA+E
Sbjct: 74 LTLHLPAEE 82
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 4 LHAPAKE 10
H PAKE
Sbjct: 419 FHVPAKE 425
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 4 LHAPAKE 10
H PAKE
Sbjct: 419 FHVPAKE 425
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 4 LHAPAKE 10
H PAKE
Sbjct: 419 FHVPAKE 425
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 4 LHAPAKE 10
H PAKE
Sbjct: 419 FHVPAKE 425
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 4 LHAPAKE 10
H PAKE
Sbjct: 419 FHVPAKE 425
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 4 LHAPAKE 10
H PAKE
Sbjct: 419 FHVPAKE 425
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 PLSLHAP 7
PL +H P
Sbjct: 1106 PLEMHGP 1112
>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)
Query: 4 LHAPAKE 10
LHAP K+
Sbjct: 86 LHAPIKQ 92
>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 LHAPAK 9
LHAP K
Sbjct: 89 LHAPVK 94
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 1 PLSLHAPAKE 10
P+S+ P KE
Sbjct: 78 PMSVMLPLKE 87
>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P
Query: 1 PLSLHAP 7
P+S HAP
Sbjct: 14 PMSTHAP 20
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 LSLHAPAK 9
+++H PAK
Sbjct: 646 IAMHGPAK 653
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 LSLHAPAK 9
+++H PAK
Sbjct: 646 IAMHGPAK 653
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 SLHAPAKE 10
+LH PAK+
Sbjct: 363 NLHKPAKK 370
>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)
Query: 4 LHAPAK 9
LHAP K
Sbjct: 89 LHAPVK 94
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 SLHAPAKE 10
+LH PAK+
Sbjct: 363 NLHKPAKK 370
71|SequenceR|360|351|LAQPDPLSLH
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LAQPDPLSLH 10
LA+PDP+ H
Sbjct: 545 LARPDPVFCH 554
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LAQPDPLSLH 10
LA+PDP+ H
Sbjct: 545 LARPDPVFCH 554
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 LAQPDPLSL 9
L QPDP S+
Sbjct: 72 LEQPDPTSV 80
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 LAQPDPLSL 9
L PDPL L
Sbjct: 1157 LETPDPLEL 1165
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 LAQPDPLSLH 10
L PD +LH
Sbjct: 1327 LTSPDEFTLH 1336
>sp|VE7_HPV55|PROTEIN E7|Human papillomavirus type 55
Query: 4 PDPLSLH 10
PDP+ LH
Sbjct: 18 PDPVGLH 24
>sp|VE7_HPV6B|PROTEIN E7|Human papillomavirus type 6b
Query: 4 PDPLSLH 10
PDP+ LH
Sbjct: 18 PDPVGLH 24
>sp|VE7_HPV6A|PROTEIN E7|Human papillomavirus type 6a
Query: 4 PDPLSLH 10
PDP+ LH
Sbjct: 18 PDPVGLH 24
>sp|VE7_HPV44|PROTEIN E7|Human papillomavirus 44
Query: 4 PDPLSLH 10
PDP+ LH
Sbjct: 18 PDPVGLH 24
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 LAQPDPLSLH 10
L Q D L+LH
Sbjct: 1563 LEQEDELTLH 1572
>sp|VE7_HPV11|PROTEIN E7|Human papillomavirus 11
Query: 4 PDPLSLH 10
PDP+ LH
Sbjct: 18 PDPVGLH 24
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 1 LAQPDPLS 8
LA PDP S
Sbjct: 110 LASPDPFS 117
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 1 LAQPDPLS 8
LA PDP S
Sbjct: 119 LASPDPFS 126
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 QPDPLSL 9
PDPL+L
Sbjct: 1144 HPDPLTL 1150
>sp|VE7_HPV13|PROTEIN E7|Human papillomavirus 13
Query: 4 PDPLSLH 10
PDP+ LH
Sbjct: 17 PDPVGLH 23
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 2 AQPDPLS 8
A+PDPL+
Sbjct: 436 AKPDPLA 442
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 4 PDPLSLH 10
PDP+S +
Sbjct: 522 PDPISTY 528
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 4 PDPLSLH 10
PDP+S +
Sbjct: 522 PDPISTY 528
>sp|VE7_HPV07|PROTEIN E7|Human papillomavirus 7
Query: 3 QPDPLSL 9
QP+P+SL
Sbjct: 16 QPEPVSL 22
72|SequenceR|365|356|PVDRKLAQPD
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 RKLAQP 9
RK+AQP
Sbjct: 2969 RKMAQP 2974
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 RKLAQP 9
RK+AQP
Sbjct: 2969 RKMAQP 2974
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 VDRKLAQP 9
VDR++ QP
Sbjct: 587 VDREVKQP 594
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 2 VDRKLAQPD 10
+DR L PD
Sbjct: 566 IDRVLCSPD 574
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 1 PVDRKLAQPD 10
PV+ L QPD
Sbjct: 389 PVELALYQPD 398
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 PVDRKLAQ 8
P DRK+ Q
Sbjct: 984 PFDRKIVQ 991
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 PVDRKLAQ 8
P DRK+ Q
Sbjct: 984 PFDRKIVQ 991
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 PVDRKLAQ 8
P DRK+ Q
Sbjct: 984 PFDRKIVQ 991
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 PVDRKLAQ 8
P DRK+ Q
Sbjct: 985 PFDRKIVQ 992
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 PVDRKLAQ 8
P DRK+ Q
Sbjct: 985 PFDRKIVQ 992
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 1 PVDRKLAQPD 10
PV+ + QPD
Sbjct: 388 PVEMAIYQPD 397
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 3 DRKLAQPD 10
DRKLA D
Sbjct: 509 DRKLAMLD 516
73|SequenceR|370|361|SVNDCPVDRK
>sp|YVKA_VACCC|UNCHARACTERIZED 9.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SVNDCP 6
S+NDCP
Sbjct: 76 SINDCP 81
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 3 NDCPVDRK 10
N C +DRK
Sbjct: 537 NPCSIDRK 544
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 3 NDCPVDRK 10
N C +DRK
Sbjct: 536 NPCSIDRK 543
>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)
Query: 3 NDCPVD 8
N CP+D
Sbjct: 242 NKCPID 247
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 DCPVDRK 10
+CP+D++
Sbjct: 921 ECPLDKR 927
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 DCPVDRK 10
+CP+D++
Sbjct: 921 ECPLDKR 927
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 NDCPVDRK 10
N C +DRK
Sbjct: 529 NPCSIDRK 536
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 DCPVDRK 10
DC DRK
Sbjct: 3512 DCSTDRK 3518
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 3 NDCP 6
NDCP
Sbjct: 89 NDCP 92
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 3 NDCP 6
NDCP
Sbjct: 89 NDCP 92
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 3 NDCP 6
NDCP
Sbjct: 77 NDCP 80
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 SVNDC 5
SVNDC
Sbjct: 4 SVNDC 8
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 NDCPVD 8
N CPVD
Sbjct: 241 NFCPVD 246
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 SVNDC 5
SVNDC
Sbjct: 4 SVNDC 8
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 NDCPVD 8
N CPVD
Sbjct: 241 NFCPVD 246
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 SVNDCPVDR 9
++N C VD+
Sbjct: 540 TINSCTVDK 548
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 NDCP 6
NDCP
Sbjct: 205 NDCP 208
>sp|PG121_MONPV|MRNA-DECAPPING protein OPG121|Monkeypox virus (MPXV)
Query: 1 SVNDCPVDRK 10
S+NDC D K
Sbjct: 189 SLNDCINDDK 198
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 SVNDCPV 7
SVNDC +
Sbjct: 521 SVNDCKI 527
>sp|PG121_VAR67|MRNA-DECAPPING protein OPG121|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SVNDCPVDRK 10
S+NDC D K
Sbjct: 189 SLNDCINDDK 198
>sp|D9_VARV|MRNA-DECAPPING protein D9|Variola virus
Query: 1 SVNDCPVDRK 10
S+NDC D K
Sbjct: 189 SLNDCINDDK 198
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 3 NDCP 6
NDCP
Sbjct: 89 NDCP 92
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 3 NDCPVDRK 10
N C +DRK
Sbjct: 529 NPCCIDRK 536
>sp|PG121_VACCC|MRNA-DECAPPING protein OPG121|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SVNDCPVDRK 10
S+NDC D K
Sbjct: 189 SLNDCINDDK 198
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 3 NDCPVDRK 10
N C +DRK
Sbjct: 533 NPCCIDRK 540
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 VNDCPVDR 9
+N+C VD+
Sbjct: 541 INNCKVDQ 548
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 VNDCPVDR 9
+N+C VD+
Sbjct: 542 INNCKVDQ 549
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 VNDCPVDR 9
+N+C VD+
Sbjct: 541 INNCKVDQ 548
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 VNDCPVDR 9
+N+C VD+
Sbjct: 541 INNCKVDQ 548
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 VNDCPVDR 9
+N+C VD+
Sbjct: 542 INNCKVDQ 549
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 3 NDCP 6
NDCP
Sbjct: 183 NDCP 186
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 1 SVNDC 5
SVNDC
Sbjct: 276 SVNDC 280
>sp|A40_VACCC|PROTEIN A40|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 DCPVD 8
DCP D
Sbjct: 55 DCPTD 59
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 VNDCPVDR 9
+N+C VD+
Sbjct: 542 INNCKVDQ 549
74|SequenceR|375|366|SSPCSSVNDC
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 CSSVNDC 10
CSSVN C
Sbjct: 1962 CSSVNKC 1968
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 CSSVNDC 10
CSSVN C
Sbjct: 1962 CSSVNKC 1968
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 CSSVNDC 10
CSSVN C
Sbjct: 1962 CSSVNRC 1968
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 SSPCSSVNDC 10
+SPC N+C
Sbjct: 140 NSPCIRTNNC 149
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 SSPCSSVNDC 10
+ PC +N+C
Sbjct: 134 TDPCIQLNNC 143
>sp|GAAP_VACCL|GOLGI anti-apoptotic protein|Vaccinia virus (strain Lister) (VACV)
Query: 2 SPCSSVND 9
S CSS+ D
Sbjct: 7 SACSSIED 14
>sp|GAAP_VACC8|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m8) (VACV)
Query: 2 SPCSSVND 9
S CSS+ D
Sbjct: 7 SACSSIED 14
>sp|GAAP_VACC0|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m0) (VACV)
Query: 2 SPCSSVND 9
S CSS+ D
Sbjct: 7 SACSSIED 14
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 SPCSSVNDC 10
+PC+ ++C
Sbjct: 144 TPCARADNC 152
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SPCSSVN 8
+PC SVN
Sbjct: 110 APCVSVN 116
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 PCSSVND 9
PC+ +ND
Sbjct: 6444 PCAIIND 6450
>sp|PG147_VACCC|VIRION membrane protein OPG147|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PCSSVND 9
PCS +N+
Sbjct: 74 PCSKINE 80
>sp|A21_VACCA|VIRION membrane protein A21|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PCSSVND 9
PCS +N+
Sbjct: 74 PCSKINE 80
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SSPCSSVN 8
S PC++V+
Sbjct: 234 SGPCTNVS 241
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 SSPCSS 6
S+PCSS
Sbjct: 1970 STPCSS 1975
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 1 SSPCSSVNDC 10
SSP SSV+ C
Sbjct: 92 SSPLSSVSLC 101
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CSSVNDC 10
CS +N C
Sbjct: 105 CSGLNAC 111
>sp|PG147_MONPV|VIRION membrane protein OPG147|Monkeypox virus (MPXV)
Query: 3 PCSSVND 9
PCS +N+
Sbjct: 73 PCSKINE 79
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SSPCSSVN 8
S PC++V+
Sbjct: 238 SGPCTNVS 245
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain AD169)
Query: 4 CSSVNDC 10
CS +N C
Sbjct: 103 CSGLNAC 109
>sp|PG147_VARV|VIRION membrane protein OPG147|Variola virus
Query: 3 PCSSVND 9
PCS +N+
Sbjct: 74 PCSEINE 80
>sp|PG147_VAR67|VIRION membrane protein OPG147|Variola virus (isolate
Query: 3 PCSSVND 9
PCS +N+
Sbjct: 74 PCSEINE 80
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 CSSVN 8
CSSVN
Sbjct: 127 CSSVN 131
75|SequenceR|380|371|QCCTDSSPCS
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 CTDSSPCS 10
CT S PCS
Sbjct: 2282 CTGSIPCS 2289
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 CCTDSSPCS 10
C T +PCS
Sbjct: 2355 CWTQITPCS 2363
>sp|EAR_EBVB9|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CCTDSSP 8
CC S+P
Sbjct: 116 CCNQSTP 122
>sp|EAR_EBVA8|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CCTDSSP 8
CC S+P
Sbjct: 116 CCNQSTP 122
>sp|EAR_EBVG|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CCTDSSP 8
CC S+P
Sbjct: 116 CCNQSTP 122
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 CTDSSPCS 10
CT SPCS
Sbjct: 16 CTSLSPCS 23
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CTDSSPCS 10
CT SPCS
Sbjct: 16 CTSLSPCS 23
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 CTDSSPCS 10
CT S PCS
Sbjct: 2282 CTGSIPCS 2289
>sp|US15_HCMVM|MEMBRANE protein US15|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CCTDSSP 8
C T+SSP
Sbjct: 77 CLTESSP 83
>sp|US15_HCMVA|UNCHARACTERIZED protein HVLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CCTDSSP 8
C T+SSP
Sbjct: 77 CLTESSP 83
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 DSSPC 9
D+SPC
Sbjct: 143 DTSPC 147
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QCCTDSSPC 9
QC ++PC
Sbjct: 69 QCLAAAAPC 77
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 QCCTDSSPC 9
Q DS+PC
Sbjct: 50 QYTPDSTPC 58
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QCCTDSSPC 9
QC ++PC
Sbjct: 69 QCLAAAAPC 77
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QCCTDSSPC 9
Q DS+PC
Sbjct: 60 QYTPDSTPC 68
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QCCTDSSPC 9
Q DS+PC
Sbjct: 60 QYTPDSTPC 68
76|SequenceR|385|376|EGSTLQCCTD
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 GSTLQCCTD 10
GST +CC D
Sbjct: 1045 GSTFRCCHD 1053
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 STLQCCT 9
+TL+CCT
Sbjct: 6356 TTLRCCT 6362
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 TLQCCT 9
TL+CCT
Sbjct: 6386 TLKCCT 6391
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 EGSTLQCCT 9
EG+ QC T
Sbjct: 85 EGTQFQCST 93
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 GSTLQCCTD 10
GS+ +CC D
Sbjct: 1042 GSSFKCCHD 1050
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 GSTLQCC 8
GST +CC
Sbjct: 1039 GSTFKCC 1045
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 GSTLQCC 8
GST +CC
Sbjct: 1040 GSTFKCC 1046
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 GSTLQCC 8
GST +CC
Sbjct: 1040 GSTFRCC 1046
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 EGSTLQCCT 9
EG ++ CC+
Sbjct: 2418 EGDSVVCCS 2426
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 EGSTLQCCT 9
EG ++ CC+
Sbjct: 2417 EGDSVVCCS 2425
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 GSTLQCCTD 10
STL+ C D
Sbjct: 366 ASTLRACKD 374
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GSTLQC 7
G+TLQC
Sbjct: 3773 GNTLQC 3778
Query: 2 GSTLQCCTD 10
G+T CTD
Sbjct: 4157 GTTQTACTD 4165
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GSTLQC 7
G+TLQC
Sbjct: 3750 GNTLQC 3755
Query: 2 GSTLQCCTD 10
G+T CTD
Sbjct: 4134 GTTQTACTD 4142
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 GSTLQC 7
G+TLQC
Sbjct: 3773 GNTLQC 3778
Query: 2 GSTLQCCTD 10
G+T CTD
Sbjct: 4157 GTTQTACTD 4165
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 2 GSTLQC 7
GSTL C
Sbjct: 155 GSTLTC 160
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 GSTLQC 7
G+TLQC
Sbjct: 3750 GNTLQC 3755
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 5 LQCCTD 10
L CC D
Sbjct: 2068 LDCCPD 2073
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 6 QCCT 9
QCCT
Sbjct: 2153 QCCT 2156
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 6 QCCT 9
QCCT
Sbjct: 2153 QCCT 2156
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 GSTLQCC 8
GS+ +CC
Sbjct: 1038 GSSFKCC 1044
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 GSTLQCC 8
GS+ +CC
Sbjct: 1038 GSSFKCC 1044
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 GSTLQCC 8
GS+ +CC
Sbjct: 1039 GSSFKCC 1045
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 GSTLQCC 8
GS+ +CC
Sbjct: 1038 GSSFKCC 1044
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 1 EGSTLQCCTD 10
EG CTD
Sbjct: 112 EGDVCAVCTD 121
77|SequenceR|390|381|PCCGWEGSTL
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 2 CCGW 5
CCGW
Sbjct: 14 CCGW 17
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 PCCGW 5
P CGW
Sbjct: 2855 PLCGW 2859
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PCCGW 5
PC GW
Sbjct: 13 PCYGW 17
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 1 PCCGW 5
PC GW
Sbjct: 13 PCYGW 17
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CCGW 5
CCGW
Sbjct: 343 CCGW 346
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 CGWE 6
CGWE
Sbjct: 1491 CGWE 1494
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 CGWE 6
CGWE
Sbjct: 1491 CGWE 1494
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CCGW 5
CCGW
Sbjct: 343 CCGW 346
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PCCGWEGS 8
P C WE +
Sbjct: 1281 PKCAWENT 1288
Query: 1 PCCGWEGST 9
PC GST
Sbjct: 1686 PCTSTNGST 1694
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PCCGWEGS 8
P C WE +
Sbjct: 1281 PKCAWENT 1288
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PCCGWEGS 8
P C WE +
Sbjct: 1281 PKCAWENT 1288
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CCGW 5
CCGW
Sbjct: 343 CCGW 346
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CCGW 5
CCGW
Sbjct: 343 CCGW 346
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 2 CCGWE 6
CC WE
Sbjct: 445 CCIWE 449
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GWEGSTL 10
GW+G TL
Sbjct: 138 GWDGETL 144
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GWEGSTL 10
GW+G TL
Sbjct: 138 GWDGETL 144
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CGWEG 7
CGWEG
Sbjct: 196 CGWEG 200
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CGWEG 7
CGWEG
Sbjct: 196 CGWEG 200
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CGWEG 7
CGW G
Sbjct: 84 CGWNG 88
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 2 CCGWE 6
CC WE
Sbjct: 223 CCVWE 227
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 PCCGWEGSTL 10
P C ++G+T+
Sbjct: 904 PVCEYQGNTI 913
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 PCCGWEGSTL 10
P C ++G+T+
Sbjct: 905 PTCEYQGNTI 914
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 PCCGWEGSTL 10
P C ++G+T+
Sbjct: 907 PVCEYQGNTV 916
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 PCCGWEGSTL 10
P C ++G+T+
Sbjct: 911 PVCQFDGNTI 920
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 PCCGWEGSTL 10
P C ++G+T+
Sbjct: 911 PVCQFDGNTI 920
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 PCCGWEGSTL 10
P C ++G+T+
Sbjct: 911 PVCQFDGNTI 920
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 PCCGWEGSTL 10
P C ++G+T+
Sbjct: 911 PVCQFDGNTI 920
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 1 PCCGWEGSTL 10
P C ++G+T+
Sbjct: 96 PVCQFDGNTI 105
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 PCCGWEGSTL 10
P C ++G+T+
Sbjct: 906 PSCQYDGNTV 915
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 PCCGWEGSTL 10
P C ++G+T+
Sbjct: 905 PTCEYQGNTV 914
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 739 GWKGS 743
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 740 GWKGS 744
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 736 GWKGS 740
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 736 GWKGS 740
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 740 GWKGS 744
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 738 GWKGS 742
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 733 GWKGS 737
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 GWEGS 8
GW+GS
Sbjct: 762 GWKGS 766
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 GWEGS 8
GW+GS
Sbjct: 764 GWKGS 768
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 734 GWKGS 738
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 745 GWKGS 749
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 743 GWKGS 747
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 734 GWKGS 738
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 GWEGS 8
GW+GS
Sbjct: 763 GWKGS 767
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 743 GWKGS 747
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 739 GWKGS 743
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 751 GWKGS 755
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 GWEGS 8
GW+GS
Sbjct: 763 GWKGS 767
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 GWEGS 8
GW+GS
Sbjct: 764 GWKGS 768
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 GWEGS 8
GW+GS
Sbjct: 762 GWKGS 766
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 737 GWKGS 741
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 738 GWKGS 742
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 744 GWKGS 748
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 739 GWKGS 743
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 739 GWKGS 743
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 751 GWKGS 755
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 734 GWKGS 738
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 735 GWKGS 739
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 GWEGS 8
GW+GS
Sbjct: 761 GWKGS 765
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 739 GWKGS 743
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 732 GWKGS 736
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 739 GWKGS 743
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 751 GWKGS 755
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 741 GWKGS 745
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 749 GWKGS 753
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 734 GWKGS 738
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 GWEGS 8
GW+GS
Sbjct: 763 GWKGS 767
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 739 GWKGS 743
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PCCGWEG 7
PC W G
Sbjct: 605 PCNTWSG 611
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 GWEGS 8
GW+GS
Sbjct: 763 GWKGS 767
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 736 GWKGS 740
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 739 GWKGS 743
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PCCGWEG 7
PC W G
Sbjct: 605 PCNTWSG 611
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 GWEGS 8
GW+GS
Sbjct: 761 GWKGS 765
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 740 GWKGS 744
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PCCGWEG 7
PC W G
Sbjct: 605 PCNTWSG 611
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 CCGWEG 7
C GW+G
Sbjct: 1111 CRGWQG 1116
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 CCGWEG 7
C GW+G
Sbjct: 1111 CRGWQG 1116
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 CCGWEG 7
C GW+G
Sbjct: 1111 CRGWQG 1116
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 GWEGS 8
GW+GS
Sbjct: 763 GWKGS 767
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 GWEGS 8
GW+GS
Sbjct: 762 GWKGS 766
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 749 GWKGS 753
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 740 GWKGS 744
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 CCGWEG 7
C GW+G
Sbjct: 1111 CRGWQG 1116
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 CCGWEG 7
C GW+G
Sbjct: 1111 CRGWQG 1116
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 CCGWEG 7
C GW+G
Sbjct: 1111 CRGWQG 1116
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 CCGWEG 7
C GW+G
Sbjct: 1111 CRGWQG 1116
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GWEGS 8
GW+GS
Sbjct: 738 GWKGS 742
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 CCGWEG 7
C GW+G
Sbjct: 1111 CRGWQG 1116
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 1 PCCGWEGSTL 10
PC W T+
Sbjct: 13 PCYSWRPWTI 22
78|SequenceR|395|386|VAEPIPCCGW
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 3 EPIPCCGW 10
EP CC W
Sbjct: 219 EPTGCCVW 226
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 6 PCCG 9
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 6 PCCG 9
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 6 PCCG 9
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 6 PCCG 9
PCCG
Sbjct: 208 PCCG 211
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 6 PCCG 9
PCCG
Sbjct: 208 PCCG 211
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 PCCGW 10
PC GW
Sbjct: 13 PCYGW 17
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 6 PCCGW 10
PC GW
Sbjct: 13 PCYGW 17
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 PIPCCGW 10
P+P C W
Sbjct: 319 PVPSCWW 325
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 PIPCCGW 10
P+P C W
Sbjct: 319 PVPSCWW 325
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 3 EPIPCCGW 10
EPI C W
Sbjct: 346 EPIHCVNW 353
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 4 PIPCC 8
P PCC
Sbjct: 188 PTPCC 192
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EPIPC 7
EP PC
Sbjct: 456 EPAPC 460
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 EPIPC 7
EP PC
Sbjct: 456 EPAPC 460
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 PIPCCG 9
PIPC G
Sbjct: 1973 PIPCSG 1978
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 PIPCCG 9
PIPC G
Sbjct: 1973 PIPCSG 1978
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 PIPCCG 9
P+PC G
Sbjct: 1973 PVPCAG 1978
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 PIPCCG 9
P+PC G
Sbjct: 1973 PVPCSG 1978
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 PIPCCG 9
P+PC G
Sbjct: 1973 PVPCSG 1978
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 2 AEPIPCCG 9
AEP+ CG
Sbjct: 55 AEPLDACG 62
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 PIPCCG 9
P+PC G
Sbjct: 1973 PVPCSG 1978
79|SequenceR|400|391|HDSCCVAEPI
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 DSCCVAE 8
D+CCV E
Sbjct: 1426 DNCCVKE 1432
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 DSCCVAE 8
D+CCV E
Sbjct: 1426 DNCCVKE 1432
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 DSCCVAE 8
D CC+ E
Sbjct: 1369 DECCIKE 1375
>sp|Y168_ADE02|UNCHARACTERIZED protein C-168|Human adenovirus C serotype 2
Query: 2 DSCCVAEP 9
++CCV P
Sbjct: 109 NNCCVGTP 116
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 1 HDSCCVAEP 9
H C V EP
Sbjct: 379 HGKCLVFEP 387
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 HDSCCVAEP 9
H C V EP
Sbjct: 379 HGKCLVFEP 387
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HDSCCVAEP 9
H C V EP
Sbjct: 379 HGKCLVFEP 387
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HDSCCVAEP 9
H C V EP
Sbjct: 379 HGKCLVFEP 387
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 1 HDSCCVAEP 9
H C V EP
Sbjct: 379 HGKCLVFEP 387
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HDSCC 5
H++CC
Sbjct: 5007 HETCC 5011
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 4 CCVAEP 9
CC +EP
Sbjct: 250 CCYSEP 255
>sp|UL107_HCMVA|UNCHARACTERIZED protein UL107|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SCCVAEPI 10
SC A+P+
Sbjct: 85 SCSFAQPV 92
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 SCCVAEPI 10
SC VA+P+
Sbjct: 2421 SCRVADPL 2428
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 SCCVAEPI 10
SC VA+P+
Sbjct: 2421 SCRVADPL 2428
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 SCCVAEPI 10
SC VA+P+
Sbjct: 2422 SCRVADPL 2429
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 HDSCCV 6
HD+C V
Sbjct: 1541 HDNCAV 1546
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 HDSCCVAE 8
H++C + E
Sbjct: 1174 HETCVICE 1181
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 HDSCCVAE 8
H++C + E
Sbjct: 1174 HETCVICE 1181
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 HDSCCVAE 8
H++C + E
Sbjct: 1174 HETCVICE 1181
>sp|IR05_HCMVA|UNCHARACTERIZED protein IRL5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HDSCC 5
HD CC
Sbjct: 53 HDCCC 57
80|SequenceR|405|396|PCCHQHDSCC
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 PCCHQHD 7
PCC HD
Sbjct: 443 PCCFLHD 449
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 3 CHQHDS 8
CHQH S
Sbjct: 6 CHQHAS 11
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 3 CHQHDS 8
CHQH S
Sbjct: 6 CHQHAS 11
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 3 CHQHDS 8
CHQH S
Sbjct: 6 CHQHAS 11
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 3 CHQHDS 8
CHQH S
Sbjct: 6 CHQHAS 11
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 CHQHDSC 9
C Q+DSC
Sbjct: 145 CIQNDSC 151
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 CCHQHD 7
C H HD
Sbjct: 60 CTHNHD 65
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 PCCHQ 5
P CHQ
Sbjct: 274 PLCHQ 278
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 PCCHQHDSC 9
P C+ SC
Sbjct: 250 PFCYNESSC 258
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 3 CHQHDS 8
CHQH +
Sbjct: 531 CHQHSN 536
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 QHDSCC 10
+H++CC
Sbjct: 5006 KHETCC 5011
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 3 CHQHDS 8
CHQH +
Sbjct: 541 CHQHSN 546
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CCHQHD 7
CC +H+
Sbjct: 230 CCREHE 235
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 2 CCHQHD 7
C H HD
Sbjct: 60 CIHNHD 65
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PCCHQ 5
PC HQ
Sbjct: 210 PCLHQ 214
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PCCHQ 5
PC HQ
Sbjct: 211 PCLHQ 215
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PCCHQ 5
PC HQ
Sbjct: 210 PCLHQ 214
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 3 CHQHDS 8
CHQH +
Sbjct: 541 CHQHSN 546
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 CCHQHDSC 9
CC+ D C
Sbjct: 409 CCNWLDRC 416
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CCHQHD 7
CC +H+
Sbjct: 230 CCREHE 235
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 CCHQHDSC 9
C H +SC
Sbjct: 134 CLHDDESC 141
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 CCHQHDSC 9
C H +SC
Sbjct: 134 CLHDDESC 141
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 CCHQHDSC 9
C H +SC
Sbjct: 134 CLHDDESC 141
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 PCCHQHD 7
PC HQ +
Sbjct: 3249 PCRHQDE 3255
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 PCCHQHD 7
PC HQ +
Sbjct: 3249 PCRHQDE 3255
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 PCCHQHD 7
PC HQ +
Sbjct: 3245 PCRHQDE 3251
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 PCCHQHD 7
PC HQ +
Sbjct: 3255 PCRHQDE 3261
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 CCHQHDSC 9
CC+ ++C
Sbjct: 691 CCNLFEAC 698
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 CCHQHDSC 9
CC+ ++C
Sbjct: 691 CCNLFEAC 698
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 CCHQHDSC 9
CC+ ++C
Sbjct: 691 CCNLFEAC 698
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 CCHQHDSC 9
CC+ ++C
Sbjct: 691 CCNLFEAC 698
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CCHQHDS 8
CC +H++
Sbjct: 699 CCLEHNT 705
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 1 PCCHQHD 7
PC QH+
Sbjct: 38 PCSIQHE 44
81|SequenceR|410|401|CTYGQPCCHQ
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YGQPCCH 9
+ PCCH
Sbjct: 24 WAYPCCH 30
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 YGQPCCH 9
+ PCCH
Sbjct: 24 WAYPCCH 30
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 TYGQPCC 8
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 TYGQPCC 8
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 2 TYGQPCC 8
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 YGQPCCH 9
+ PCCH
Sbjct: 24 WAYPCCH 30
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CTYGQPCCH 9
C Y Q CH
Sbjct: 169 CEYPQTICH 177
>sp|UL140_HCMVM|PROTEIN UL140|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CTYGQPCC 8
C + Q CC
Sbjct: 59 CAWIQRCC 66
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 4 GQPCC 8
G PCC
Sbjct: 528 GNPCC 532
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 CTYGQP 6
CT+G P
Sbjct: 1639 CTFGAP 1644
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 PCCHQ 10
PC HQ
Sbjct: 210 PCLHQ 214
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 2 TYGQPCC 8
T+G P C
Sbjct: 159 TFGYPSC 165
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 6 PCCHQ 10
PC HQ
Sbjct: 210 PCLHQ 214
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 PCCHQ 10
PC HQ
Sbjct: 211 PCLHQ 215
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 4 GQPCC 8
G PCC
Sbjct: 532 GNPCC 536
>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)
Query: 5 QPCCHQ 10
QP CH+
Sbjct: 221 QPVCHR 226
>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 QPCCHQ 10
QP CH+
Sbjct: 221 QPVCHR 226
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CTYGQP 6
CT+G P
Sbjct: 1639 CTFGAP 1644
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GQPCC 8
G PCC
Sbjct: 4267 GVPCC 4271
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CTYGQPCCH 9
C Y CH
Sbjct: 602 CDYADKLCH 610
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CTYGQPCCH 9
C Y CH
Sbjct: 602 CDYADKLCH 610
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 3 YGQPCCHQ 10
YGQP Q
Sbjct: 573 YGQPLVEQ 580
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 TYGQPCCH 9
T G P CH
Sbjct: 564 TCGAPPCH 571
82|SequenceR|415|406|QGEAVCTYGQ
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 QGEAVCTY 8
QGE +CT+
Sbjct: 664 QGEDICTW 671
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 2 GEAVCTYG 9
GEA+ YG
Sbjct: 239 GEAILNYG 246
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GEAVCTYG 9
GEA+ YG
Sbjct: 239 GEAILNYG 246
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 QGEAVCTYG 9
QGE V YG
Sbjct: 1635 QGEVVGLYG 1643
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 QGEAVCTYG 9
QGE V YG
Sbjct: 1637 QGEVVGLYG 1645
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 QGEAVCTYG 9
QGE V YG
Sbjct: 1637 QGEVVGLYG 1645
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 2 GEAVC 6
GEAVC
Sbjct: 192 GEAVC 196
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 2 GEAVCTY 8
EA+C Y
Sbjct: 1582 AEAICAY 1588
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 2 GEAVC 6
GEAVC
Sbjct: 192 GEAVC 196
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 3 EAVCTYGQ 10
EA+ T+GQ
Sbjct: 24 EAIITHGQ 31
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 3 EAVCTYGQ 10
EA+ T+GQ
Sbjct: 24 EAIITHGQ 31
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 3 EAVCTYGQ 10
EA+ T+GQ
Sbjct: 24 EAIITHGQ 31
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 GEAVCTY 8
EA+C Y
Sbjct: 1582 AEAICRY 1588
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QGEAVCTYG 9
+GE C YG
Sbjct: 1099 KGEDGCWYG 1107
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QGEAVCTYG 9
+GE C YG
Sbjct: 1098 KGEDGCWYG 1106
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QGEAVCTYG 9
+GE C YG
Sbjct: 1099 RGEDGCWYG 1107
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QGEAVCTYG 9
+GE C YG
Sbjct: 1099 RGEDGCWYG 1107
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QGEAVCTYG 9
+GE C YG
Sbjct: 1099 RGEDGCWYG 1107
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QGEAVCTYG 9
+GE C YG
Sbjct: 1099 RGEDGCWYG 1107
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 QGEAVCTYG 9
+GE C YG
Sbjct: 1099 RGEDGCWYG 1107
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QGEAVCTYG 9
+GE C YG
Sbjct: 1099 RGEDGCWYG 1107
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QGEAVCTYG 9
+GE C YG
Sbjct: 1099 RGEDGCWYG 1107
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QGEAVCTYG 9
+GE C YG
Sbjct: 1099 RGEDGCWYG 1107
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QGEAVCTYG 9
+GE C YG
Sbjct: 819 RGEDGCWYG 827
83|SequenceR|420|411|SGRQCQGEAV
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 SGRQCQGEAV 10
S +QC+GE V
Sbjct: 1147 SYQQCRGERV 1156
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 SGRQCQGEAV 10
S +QC+GE V
Sbjct: 1148 SYQQCRGERV 1157
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 SGRQCQGEAV 10
S +QC+GE V
Sbjct: 1148 SYQQCRGERV 1157
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 2 GRQCQGEAV 10
GR+C G +
Sbjct: 121 GRKCDGRTI 129
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 SGRQCQGEAV 10
SGR+ QG+ +
Sbjct: 2 SGRKAQGKTL 11
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 SGRQCQGEAV 10
SGR+ QG+ +
Sbjct: 2 SGRKAQGKTL 11
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 SGRQCQGEAV 10
SGR+ QG+ +
Sbjct: 2 SGRKAQGKTL 11
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 SGRQCQGEAV 10
SGR+ QG+ +
Sbjct: 2 SGRKAQGKTL 11
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 SGRQCQGEAV 10
SGR+ QG+ +
Sbjct: 2 SGRKAQGKTL 11
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 1 SGRQCQGEAV 10
+GR +GE V
Sbjct: 165 TGRDIEGEGV 174
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 SGRQCQGEAV 10
SGR+ QG+ +
Sbjct: 2 SGRKAQGKTL 11
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 SGRQCQGEAV 10
SGR+ QG+ +
Sbjct: 2 SGRKAQGKTL 11
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 SGRQCQGEAV 10
SGR+ QG+ +
Sbjct: 2 SGRKAQGKTL 11
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 SGRQCQGEAV 10
SGR+ QG+ +
Sbjct: 2 SGRKAQGKTL 11
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 GRQCQGEAV 10
GR+C G V
Sbjct: 175 GRKCSGITV 183
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 GRQCQGEAV 10
GR+C G V
Sbjct: 175 GRKCSGITV 183
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 2 GRQCQG 7
G+QC G
Sbjct: 169 GKQCTG 174
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 SGRQCQGEAV 10
SGR+ QG+ +
Sbjct: 2 SGRKAQGKTL 11
>sp|VLTF3_VARV|VIRAL late gene transcription factor|Variola virus
Query: 4 QCQGEAV 10
QC GE +
Sbjct: 62 QCSGEII 68
>sp|VLTF3_VAR67|VIRAL late gene transcription factor|Variola virus (isolate
Query: 4 QCQGEAV 10
QC GE +
Sbjct: 62 QCSGEII 68
>sp|VLTF3_VACCC|VIRAL late gene transcription factor|Vaccinia virus (strain Copenhagen)
Query: 4 QCQGEAV 10
QC GE +
Sbjct: 62 QCSGEII 68
>sp|VLTF3_VACCA|VIRAL late gene transcription factor|Vaccinia virus (strain Ankara)
Query: 4 QCQGEAV 10
QC GE +
Sbjct: 62 QCSGEII 68
>sp|VLTF3_MONPV|VIRAL late gene transcription factor|Monkeypox virus (MPXV)
Query: 4 QCQGEAV 10
QC GE +
Sbjct: 62 QCSGEII 68
84|SequenceR|425|416|GAVIESGRQC
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 1 GAVIESGR 8
G V+ESGR
Sbjct: 93 GVVVESGR 100
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 IESGRQC 10
+E GR+C
Sbjct: 914 VEGGREC 920
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 AVIESGRQ 9
AVI SGR+
Sbjct: 729 AVIYSGRE 736
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 AVIESGRQ 9
AVI SGR+
Sbjct: 729 AVIYSGRE 736
85|SequenceR|430|421|PMKELGAVIE
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 17 PYKEFGATVE 26
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 17 PYKEFGATVE 26
>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 17 PYKEFGATVE 26
>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGATVE 43
>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVD3|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVD6|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGATVE 14
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|CAPSD_HBVF6|CAPSID protein|Hepatitis B virus genotype F2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 181 PYKEFGASVE 190
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 34 PYKEFGASVE 43
>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA ++
Sbjct: 34 PYKEFGATVQ 43
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 1 PMKELGAVIE 10
P KE GA ++
Sbjct: 5 PYKEFGATVQ 14
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 1 PMKELGAVIE 10
P KE GA +E
Sbjct: 5 PYKEFGASVE 14
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PMKELGAVIE 10
PM +LG VI+
Sbjct: 387 PMHQLGNVIK 396
>sp|CAPSD_HBVB7|CAPSID protein|Hepatitis B virus genotype B1
Query: 1 PMKELGAVIE 10
P KE GA E
Sbjct: 5 PYKEFGASTE 14
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 MKELGAVIE 10
M+ LGAV+E
Sbjct: 2159 MEILGAVLE 2167
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 MKELGAVIE 10
+KEL AV++
Sbjct: 962 IKELAAVVQ 970
86|SequenceR|435|426|SARRAPMKEL
>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 SARRAPMKEL 10
SAR+ M+EL
Sbjct: 153 SARKEKMQEL 162
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 SARRAPMKEL 10
SAR+ M+EL
Sbjct: 153 SARKEKMQEL 162
87|SequenceR|440|431|RPHSLSARRA
>sp|ORF3C_SARS2|ORF3C protein|Severe acute respiratory syndrome coronavirus
Query: 1 RPHSLS 6
+PHSLS
Sbjct: 17 KPHSLS 22
88|SequenceR|445|436|DCGIDRPHSL
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 CGIDRPHS 9
CG+ PHS
Sbjct: 2512 CGLTPPHS 2519
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 2 CGIDRPH 8
C IDR H
Sbjct: 538 CSIDRKH 544
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 CGIDRPHS 9
CG+ PHS
Sbjct: 2512 CGLTPPHS 2519
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 2 CGIDRPH 8
C IDR H
Sbjct: 531 CSIDRKH 537
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 2 CGIDRPH 8
C IDR H
Sbjct: 539 CSIDRKH 545
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DCGIDR 6
+CG+DR
Sbjct: 3137 ECGVDR 3142
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DCGIDR 6
+CG+DR
Sbjct: 3137 ECGVDR 3142
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DCGIDR 6
+CG+DR
Sbjct: 3137 ECGVDR 3142
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DCGIDR 6
+CG+DR
Sbjct: 3137 ECGVDR 3142
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DCGIDR 6
+CG+DR
Sbjct: 3137 ECGVDR 3142
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 1 DCGIDRPHSL 10
DC D PH L
Sbjct: 176 DCDYDEPHHL 185
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 2 CGIDRP 7
CG+ RP
Sbjct: 248 CGVSRP 253
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 2 CGIDRPHS 9
CG+D HS
Sbjct: 246 CGVDFTHS 253
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 2 CGIDRPHS 9
CG+D HS
Sbjct: 246 CGVDFTHS 253
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 244 LDRPHT 249
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 245 LDRPHT 250
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 245 LDRPHT 250
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 244 LDRPHT 249
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 244 LDRPHT 249
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 245 LDRPHT 250
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 245 LDRPHT 250
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 245 LDRPHT 250
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 244 LDRPHT 249
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 244 LDRPHT 249
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 244 LDRPHT 249
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 244 LDRPHT 249
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 245 LDRPHT 250
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 245 LDRPHT 250
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 IDRPHS 9
+DRPH+
Sbjct: 245 LDRPHT 250
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 DCGIDRPHS 9
DCG PHS
Sbjct: 609 DCGGYLPHS 617
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 DCGIDRPHS 9
DCG PHS
Sbjct: 609 DCGGYLPHS 617
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 1 DCGIDRP 7
DCG D P
Sbjct: 440 DCGRDEP 446
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 DCGIDRPHS 9
DCG PHS
Sbjct: 609 DCGGYLPHS 617
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 1 DCGIDRP 7
DC + RP
Sbjct: 49 DCSVHRP 55
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 1 DCGIDRPHS 9
+ GI+ PH+
Sbjct: 343 NTGIEEPHA 351
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 DCGIDRPHS 9
+ GI+ PH+
Sbjct: 344 NTGIEEPHA 352
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 DCGIDRP 7
D G+D+P
Sbjct: 2297 DLGVDQP 2303
Query: 5 DRPHS 9
D+PHS
Sbjct: 1052 DKPHS 1056
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 DCGIDRP 7
D G+D+P
Sbjct: 2295 DLGVDQP 2301
Query: 5 DRPHS 9
D+PHS
Sbjct: 1052 DKPHS 1056
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 DCGIDRP 7
D G+D+P
Sbjct: 2295 DLGVDQP 2301
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 DCGIDRP 7
D G+D+P
Sbjct: 2295 DLGVDQP 2301
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 DCGIDRP 7
D G+D+P
Sbjct: 2296 DLGVDQP 2302
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 DCGIDRP 7
D G+D+P
Sbjct: 2252 DLGVDQP 2258
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 CGIDRPHS 9
C + PHS
Sbjct: 2531 CALTPPHS 2538
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CGIDRPHS 9
C + PHS
Sbjct: 2531 CALTPPHS 2538
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CGIDRPHS 9
C + PHS
Sbjct: 2531 CALTPPHS 2538
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 1 DCGIDRP 7
D GID P
Sbjct: 144 DIGIDTP 150
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 3 GIDRPHSL 10
G+D HSL
Sbjct: 44 GLDSMHSL 51
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 GIDRPHSL 10
G+D HSL
Sbjct: 44 GLDSMHSL 51
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GIDRPHSL 10
G+D HSL
Sbjct: 44 GLDSMHSL 51
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 3 GIDRPHSL 10
G+D HSL
Sbjct: 44 GLDSMHSL 51
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 3 GIDRPHSL 10
G+D HSL
Sbjct: 44 GLDSMHSL 51
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 CGIDRPHS 9
C + PHS
Sbjct: 2535 CALTPPHS 2542
>sp|VE7_HPV52|PROTEIN E7|Human papillomavirus 52
Query: 3 GIDRP 7
G+DRP
Sbjct: 39 GVDRP 43
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 CGIDRPHS 9
C + PHS
Sbjct: 2511 CALTPPHS 2518
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 DCGIDRP 7
D G+D P
Sbjct: 2256 DLGVDHP 2262
89|SequenceR|450|441|CSTHQDCGID
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 4 HQDCGID 10
H+DC ID
Sbjct: 751 HRDCRID 757
>sp|VLTF1_VACCC|LATE transcription factor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CSTHQDCGID 10
CS H D ID
Sbjct: 79 CSFHNDAIID 88
>sp|VLTF1_VAR67|LATE transcription factor 1|Variola virus (isolate
Query: 1 CSTHQDCGID 10
CS H D ID
Sbjct: 79 CSFHNDAIID 88
>sp|VLTF1_VACCA|LATE transcription factor 1|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CSTHQDCGID 10
CS H D ID
Sbjct: 79 CSFHNDAIID 88
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 CSTHQD 6
C+TH D
Sbjct: 2215 CTTHHD 2220
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 CSTHQD 6
C+TH D
Sbjct: 2215 CTTHHD 2220
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 CSTHQD 6
C+TH D
Sbjct: 2215 CTTHHD 2220
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 CSTHQD 6
C+TH D
Sbjct: 2215 CTTHHD 2220
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 CSTHQD 6
C+TH D
Sbjct: 2215 CTTHHD 2220
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 CSTHQD 6
C+TH D
Sbjct: 2215 CTTHHD 2220
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 4 HQDCGID 10
H D GID
Sbjct: 126 HDDSGID 132
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 CSTHQD 6
C+TH D
Sbjct: 2219 CTTHAD 2224
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 THQDCG 8
TH +CG
Sbjct: 1549 THAECG 1554
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 CSTHQDCGI 9
CS +D GI
Sbjct: 1463 CSIERDLGI 1471
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 THQDC 7
TH+DC
Sbjct: 4633 THRDC 4637
>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 THQDCG 8
+ QDCG
Sbjct: 124 SQQDCG 129
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 STHQDCGID 10
S H D G+D
Sbjct: 3582 SKHSDFGLD 3590
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 STHQDCGID 10
S H D G+D
Sbjct: 3582 SKHSDFGLD 3590
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 QDCGID 10
++CG+D
Sbjct: 3136 KECGVD 3141
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 QDCGID 10
++CG+D
Sbjct: 3136 KECGVD 3141
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 QDCGID 10
++CG+D
Sbjct: 3136 KECGVD 3141
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 QDCGID 10
++CG+D
Sbjct: 3136 KECGVD 3141
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 QDCGID 10
++CG+D
Sbjct: 3136 KECGVD 3141
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CSTHQDCGID 10
CS H G+D
Sbjct: 69 CSRHTRHGVD 78
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CSTHQDCGID 10
CS H G+D
Sbjct: 69 CSRHTRHGVD 78
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 STHQDCG 8
+T+Q CG
Sbjct: 597 ATYQKCG 603
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 CSTHQDCG 8
C TH CG
Sbjct: 264 CGTHCVCG 271
90|SequenceR|455|446|TQGVPCSTHQ
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 TQGVPCSTHQ 10
T GVP THQ
Sbjct: 764 TSGVPAITHQ 773
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 4 VPCSTHQ 10
VPCST Q
Sbjct: 1049 VPCSTSQ 1055
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 GVPCST 8
GVPC T
Sbjct: 4267 GVPCCT 4272
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 1 TQGVPCSTH 9
T G+P STH
Sbjct: 445 TTGLPSSTH 453
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TQGVPCSTH 9
T G+P STH
Sbjct: 445 TTGLPSSTH 453
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TQGVPCSTH 9
T G+P STH
Sbjct: 445 TTGLPSSTH 453
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TQGVPCSTH 9
T G+P STH
Sbjct: 445 TTGLPSSTH 453
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 2 QGVPCS 7
QGVPC+
Sbjct: 197 QGVPCN 202
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 4 VPCSTHQ 10
VPC+T+Q
Sbjct: 483 VPCTTYQ 489
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 4 VPCSTHQ 10
VPC+T+Q
Sbjct: 483 VPCTTYQ 489
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 TQGVPCSTHQ 10
T G P THQ
Sbjct: 764 TAGAPAITHQ 773
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 TQGVPCSTHQ 10
T G P THQ
Sbjct: 764 TAGAPAITHQ 773
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 GVPCSTH 9
GVPC++
Sbjct: 1490 GVPCTSQ 1496
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 TQGVPCST 8
T GVPC T
Sbjct: 818 TVGVPCKT 825
>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P
Query: 3 GVPCSTH 9
GVP STH
Sbjct: 12 GVPMSTH 18
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 2 QGVPC 6
QGVPC
Sbjct: 496 QGVPC 500
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 4 VPCSTHQ 10
+PC+T+Q
Sbjct: 484 IPCTTYQ 490
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 4 VPCSTHQ 10
+PC+T+Q
Sbjct: 484 IPCTTYQ 490
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 GVPCST 8
G PC+T
Sbjct: 2082 GAPCTT 2087
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 4 VPCSTHQ 10
+PC+T+Q
Sbjct: 475 LPCTTYQ 481
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 QGVPCSTH 9
+G PCS+
Sbjct: 593 RGAPCSSE 600
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 QGVPCSTH 9
+G PCS+
Sbjct: 593 RGAPCSSE 600
91|SequenceR|460|451|LSPCCTQGVP
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 LSPCCTQGVP 10
LS CCT+ VP
Sbjct: 1373 LSKCCTRHVP 1382
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 LSPCCTQGVP 10
LS CCT+ VP
Sbjct: 1373 LSKCCTRHVP 1382
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 4 CCTQGV 9
CCT+G+
Sbjct: 265 CCTRGI 270
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 4 CCTQGV 9
CCT+G+
Sbjct: 274 CCTRGI 279
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 4 CCTQGV 9
CCT+G+
Sbjct: 274 CCTRGI 279
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 CCTQGV 9
CCT GV
Sbjct: 845 CCTMGV 850
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 PCCT 6
PCCT
Sbjct: 4269 PCCT 4272
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPCCTQGVP 10
S C TQG P
Sbjct: 352 SRCPTQGEP 360
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPCCTQGVP 10
S C TQG P
Sbjct: 352 SRCPTQGEP 360
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPCCTQGVP 10
S C TQG P
Sbjct: 352 SRCPTQGEP 360
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPCCTQGVP 10
S C TQG P
Sbjct: 352 SRCPTQGEP 360
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 SPCCTQGVP 10
S C TQG P
Sbjct: 352 SRCPTQGEP 360
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPCCTQGVP 10
S C TQG P
Sbjct: 352 SRCPTQGEP 360
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPCCTQGVP 10
S C TQG P
Sbjct: 352 SRCPTQGEP 360
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPCCTQGVP 10
S C TQG P
Sbjct: 72 SRCPTQGEP 80
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 5 CTQGVP 10
CT GVP
Sbjct: 384 CTGGVP 389
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 SPCCTQGVP 10
+PC T G P
Sbjct: 597 NPCKTDGRP 605
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 CTQGVP 10
CT GVP
Sbjct: 1310 CTHGVP 1315
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 2 SPCCTQGVP 10
PC +QG P
Sbjct: 19 KPCLSQGSP 27
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPCCTQGVP 10
S C TQG P
Sbjct: 352 SRCPTQGEP 360
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 CCTQGVP 10
C TQG P
Sbjct: 353 CPTQGEP 359
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SPCCTQGVP 10
S C TQG P
Sbjct: 252 SRCPTQGEP 260
>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 LSPCCTQGV 9
L P C QG+
Sbjct: 166 LHPMCQQGM 174
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 CCTQGVP 10
C TQG P
Sbjct: 353 CPTQGEP 359
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 CCTQGVP 10
C TQG P
Sbjct: 353 CPTQGEP 359
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 CCTQGVP 10
C TQG P
Sbjct: 353 CPTQGEP 359
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 CCTQGVP 10
C TQG P
Sbjct: 353 CPTQGEP 359
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 LSPCCTQGVP 10
LSP Q VP
Sbjct: 2599 LSPTADQSVP 2608
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CTQGVP 10
CT G+P
Sbjct: 159 CTSGLP 164
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CTQGVP 10
CT G+P
Sbjct: 159 CTSGLP 164
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CTQGVP 10
CT G+P
Sbjct: 159 CTSGLP 164
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CTQGVP 10
CT G+P
Sbjct: 159 CTSGLP 164
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CTQGVP 10
CT G+P
Sbjct: 159 CTSGLP 164
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CTQGVP 10
CT G+P
Sbjct: 159 CTSGLP 164
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CTQGVP 10
CT G+P
Sbjct: 159 CTSGLP 164
92|SequenceR|465|456|AWSGGLSPCC
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 AWSGGLSPCC 10
AW G LS CC
Sbjct: 256 AWDGYLSSCC 265
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 AWSGGLSPCC 10
AW G LS CC
Sbjct: 256 AWDGYLSSCC 265
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 WSGGLSPC 9
WSG LSPC
Sbjct: 94 WSGLLSPC 101
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate
Query: 2 WSGGLSPC 9
WSG LSPC
Sbjct: 92 WSGLLSPC 99
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 WSGGLSPC 9
+SG +SPC
Sbjct: 2003 YSGAVSPC 2010
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 1 AWSGGLS 7
AW+GGL+
Sbjct: 540 AWTGGLA 546
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AWSGGLS 7
AW+GGL+
Sbjct: 540 AWTGGLA 546
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 SGGLSPC 9
+GGL PC
Sbjct: 125 AGGLGPC 131
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 WSGGLSPCC 10
W+G S CC
Sbjct: 258 WTGFKSSCC 266
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 WSGGLSPCC 10
W+G S CC
Sbjct: 258 WTGFKSSCC 266
Query: 2 WSGGL 6
W+GGL
Sbjct: 5778 WAGGL 5782
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 WSGGLSPCC 10
W+G +SP C
Sbjct: 763 WTGSISPKC 771
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 AWSGGLSPC 9
AW GL+ C
Sbjct: 1315 AWRAGLATC 1323
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 AWSGGLSPC 9
AW GL+ C
Sbjct: 1315 AWRAGLATC 1323
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 AWSGGLSPC 9
AW GL+ C
Sbjct: 1311 AWRAGLATC 1319
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 WSGGLSPC 9
+SG ++PC
Sbjct: 2004 YSGAVNPC 2011
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 WSGGLSPCC 10
W+G SP C
Sbjct: 763 WTGSFSPKC 771
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 AWSGGLSPCC 10
AW G+S CC
Sbjct: 1783 AWYKGIS-CC 1791
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 AWSGGLSPCC 10
AW G+S CC
Sbjct: 1783 AWYKGIS-CC 1791
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 WSGGLS 7
WS GLS
Sbjct: 456 WSAGLS 461
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 AWSGGLSPC 9
AW G+S C
Sbjct: 1788 AWYKGISYC 1796
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 WSGGLS 7
WS GLS
Sbjct: 456 WSSGLS 461
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 WSGGLS 7
WS GLS
Sbjct: 456 WSSGLS 461
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 WSGGLS 7
WS GLS
Sbjct: 456 WSSGLS 461
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 1 AWSGGLSP 8
W+ GLSP
Sbjct: 407 GWNIGLSP 414
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 WSGGLS 7
WS GLS
Sbjct: 456 WSSGLS 461
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 2 WSGGLSP 8
W+ GLSP
Sbjct: 399 WNFGLSP 405
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 WSGGLS 7
WS GLS
Sbjct: 456 WSSGLS 461
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 2 WSGGLSP 8
W+ GLSP
Sbjct: 399 WNFGLSP 405
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 3 SGGLSP 8
SGG+SP
Sbjct: 53 SGGVSP 58
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 3 SGGLSP 8
SGG+SP
Sbjct: 53 SGGVSP 58
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 GGLSPCC 10
GGL P C
Sbjct: 161 GGLVPFC 167
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 GGLSPCC 10
GGL P C
Sbjct: 161 GGLVPFC 167
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 GGLSPCC 10
GGL P C
Sbjct: 161 GGLVPFC 167
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 GGLSPCC 10
GGL P C
Sbjct: 161 GGLVPFC 167
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 WSGGLSPC 9
W G PC
Sbjct: 1143 WLGQYEPC 1150
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 WSGGLS 7
WS G+S
Sbjct: 454 WSAGMS 459
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AWSGGLSP 8
AW G SP
Sbjct: 563 AWDGERSP 570
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WSGGLS 7
WS GLS
Sbjct: 1420 WSQGLS 1425
>sp|VE6_HPV16|PROTEIN E6|Human papillomavirus type 16
Query: 2 WSGGLSPCC 10
W+G CC
Sbjct: 139 WTGRCMSCC 147
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AWSGGLSP 8
A GGLSP
Sbjct: 271 AEKGGLSP 278
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 WSGGLSPC 9
W L PC
Sbjct: 108 WDESLKPC 115
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 WSGGLSPC 9
W L PC
Sbjct: 108 WDESLKPC 115
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 2 WSGGLSP 8
W+ GL+P
Sbjct: 89 WNFGLTP 95
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 SGGLSPC 9
+GG +PC
Sbjct: 757 AGGRAPC 763
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 WSGGLS 7
W+GG+S
Sbjct: 2205 WAGGVS 2210
>sp|UL24_HHV8P|PROTEIN UL24 homolog|Human herpesvirus 8 type P
Query: 3 SGGLSPCC 10
SGG P C
Sbjct: 80 SGGHQPVC 87
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 GGLSP 8
GGLSP
Sbjct: 988 GGLSP 992
>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 WSGGLS 7
W GG+S
Sbjct: 187 WIGGIS 192
93|SequenceR|470|461|PLQCCAWSGG
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 PLQCCAWSGG 10
P+ CC++ G
Sbjct: 2452 PIHCCSFFSG 2461
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 PLQCCAWSGG 10
P+ CC++ G
Sbjct: 2364 PIHCCSFFSG 2373
Query: 4 CCAWSG 9
CC +SG
Sbjct: 1384 CCLYSG 1389
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 QCCAWS 8
+CC WS
Sbjct: 911 RCCFWS 916
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 QCCAWS 8
+CC WS
Sbjct: 911 RCCFWS 916
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 1 PLQCCAW 7
P CC W
Sbjct: 220 PTGCCVW 226
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LQCCAWSGG 10
L+ AW+GG
Sbjct: 536 LRYAAWTGG 544
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LQCCAWSGG 10
L+ AW+GG
Sbjct: 536 LRYAAWTGG 544
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 PLQCCAWSG 9
P+QC A +G
Sbjct: 1706 PVQCVAPAG 1714
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 1 PLQCCAWSGG 10
P+Q A SGG
Sbjct: 196 PMQTFATSGG 205
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 1 PLQCCAWSGG 10
P+Q A SGG
Sbjct: 196 PMQTFATSGG 205
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 1 PLQCCAWSGG 10
P+Q A SGG
Sbjct: 195 PMQTFATSGG 204
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 CCAWS 8
CC W+
Sbjct: 419 CCLWA 423
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 4 CCAWS 8
CC W+
Sbjct: 417 CCLWA 421
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 4 CCAWS 8
CC W+
Sbjct: 416 CCLWA 420
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 CCAWS 8
CC W+
Sbjct: 418 CCLWA 422
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 CCAWS 8
CC W+
Sbjct: 418 CCLWA 422
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 CCAWS 8
CC W+
Sbjct: 418 CCLWA 422
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 4 CCAWS 8
CC W+
Sbjct: 418 CCLWA 422
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 4 CCAWS 8
CC W+
Sbjct: 417 CCLWA 421
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 CCAWS 8
CC W+
Sbjct: 418 CCLWA 422
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 4 CCAWS 8
CC W+
Sbjct: 418 CCLWA 422
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 LQCCAW 7
+Q CAW
Sbjct: 3344 IQNCAW 3349
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 LQCCAW 7
+Q CAW
Sbjct: 3344 IQNCAW 3349
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 4 CCAW 7
CC W
Sbjct: 445 CCIW 448
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 4 CCAWS 8
CC W+
Sbjct: 324 CCLWT 328
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 4 CCAWS 8
CC W+
Sbjct: 324 CCLWT 328
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 LQCCAWSGG 10
+ C WS G
Sbjct: 318 ISCVLWSTG 326
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 LQCCAWSGG 10
+ C WS G
Sbjct: 318 ISCVLWSTG 326
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 LQCCAWSGG 10
+ C WS G
Sbjct: 318 ISCVLWSTG 326
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 7 WSGG 10
WSGG
Sbjct: 652 WSGG 655
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 7 WSGG 10
WSGG
Sbjct: 652 WSGG 655
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 1 PLQCCAW 7
PL C +W
Sbjct: 160 PLGCGSW 166
>sp|VE8E2_HPV29|PROTEIN E8^E2C|Human papillomavirus 29
Query: 3 QCCAWSGG 10
Q CA +GG
Sbjct: 74 QACARTGG 81
94|SequenceR|475|466|CCVAHPLQCC
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 CVAHPL 7
CVAHPL
Sbjct: 924 CVAHPL 929
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5316 CIRKPLLCC 5324
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5374 CIRKPLLCC 5382
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5404 CIRKPLLCC 5412
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CVAHPLQCC 10
C+ PL CC
Sbjct: 5354 CIRKPLLCC 5362
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 CCVAHPLQC 9
CC H L C
Sbjct: 5816 CCFKHALGC 5824
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CCVAHPLQC 9
CC H L C
Sbjct: 5791 CCFKHALGC 5799
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5343 CIRRPFLCC 5351
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5320 CIRRPFLCC 5328
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 CVAHPLQCC 10
C+ P CC
Sbjct: 5329 CIRRPFLCC 5337
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 CVAHP 6
CV+HP
Sbjct: 340 CVSHP 344
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 CVAHP 6
CV+HP
Sbjct: 337 CVSHP 341
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1379 CCPVNFKKCC 1388
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1375 CCPVNFKKCC 1384
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1389 CCPVNFKKCC 1398
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1371 CCPVNFKKCC 1380
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1382 CCPVNFKRCC 1391
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1383 CCPVNFKRCC 1392
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1370 CCPVNFKKCC 1379
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1384 CCPVNFKKCC 1393
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|IR08_HCMVA|UNCHARACTERIZED protein IRL8|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 HPLQC 9
HPL C
Sbjct: 103 HPLSC 107
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1381 CCPVNFKRCC 1390
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1373 CCPVNFKRCC 1382
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1381 CCPVNFKKCC 1390
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 CCVAHPLQCC 10
CC L CC
Sbjct: 780 CCARSLLSCC 789
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1371 CCPVNFKRCC 1380
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 CCVAHPLQCC 10
CC + +CC
Sbjct: 1391 CCPVNFKRCC 1400
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 3 VAHPLQ 8
VAHPL+
Sbjct: 146 VAHPLE 151
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 5 HPLQCC 10
HP+Q C
Sbjct: 218 HPVQRC 223
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 CCVAHPLQCC 10
CC+ + CC
Sbjct: 790 CCIKSLICCC 799
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 CCVAHPLQCC 10
CC+ + CC
Sbjct: 790 CCIKSLICCC 799
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 5 HPLQC 9
HP++C
Sbjct: 1893 HPVEC 1897
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 CCVAHPL 7
C + HPL
Sbjct: 243 CAITHPL 249
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 2 CVAHP 6
CV HP
Sbjct: 433 CVLHP 437
95|SequenceR|480|471|HQRDECCVAH
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 QRDECCVAH 10
Q+ ECC+ H
Sbjct: 1158 QKGECCICH 1166
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 QRDECCVAH 10
Q+ ECC+ H
Sbjct: 1158 QKGECCICH 1166
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 HQRDECCV 8
H RD CCV
Sbjct: 1423 HVRDNCCV 1430
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 HQRDECCV 8
H DECC+
Sbjct: 1366 HIEDECCI 1373
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 HQRDECCV 8
H +D CCV
Sbjct: 1423 HVKDNCCV 1430
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 2 QRDECC 7
+RD+CC
Sbjct: 210 KRDDCC 215
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 QRDECCVAH 10
++ EC VAH
Sbjct: 1794 KQSECAVAH 1802
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 6 CCVAH 10
CCV H
Sbjct: 600 CCVQH 604
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 6 CCVAH 10
CCV H
Sbjct: 600 CCVQH 604
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 RDECCV 8
+ ECCV
Sbjct: 67 KQECCV 72
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 RDECCV 8
+ ECCV
Sbjct: 67 KQECCV 72
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 ECCVAH 10
EC +AH
Sbjct: 484 ECLIAH 489
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 DECCVAH 10
DE C+ H
Sbjct: 4366 DEMCILH 4372
>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23
Query: 1 HQRDEC 6
H+R++C
Sbjct: 406 HEREKC 411
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QRDECC 7
QRDE C
Sbjct: 18 QRDERC 23
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169)
Query: 2 QRDECC 7
QRDE C
Sbjct: 18 QRDERC 23
96|SequenceR|485|476|GAPCCHQRDE
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 APCCHQRD 9
APCC+++D
Sbjct: 279 APCCYEKD 286
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 4 CCHQRDE 10
CC+++DE
Sbjct: 166 CCYKKDE 172
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 APCCHQRDE 10
P CHQR +
Sbjct: 273 GPLCHQRSK 281
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PCCH 6
PCCH
Sbjct: 27 PCCH 30
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PCCH 6
PCCH
Sbjct: 27 PCCH 30
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PCCH 6
PCCH
Sbjct: 27 PCCH 30
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 GAPCCHQRDE 10
G P C+QR +
Sbjct: 272 GGPPCYQRSK 281
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 APCCHQRD 9
APCC++++
Sbjct: 284 APCCYEKE 291
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 APCCHQR 8
APCC+++
Sbjct: 290 APCCYEK 296
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 APCCHQR 8
APCC+++
Sbjct: 290 APCCYEK 296
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 APCCHQR 8
APCC+++
Sbjct: 283 APCCYEK 289
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GAPCC 5
G PCC
Sbjct: 4267 GVPCC 4271
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 APCCHQR 8
APCC+++
Sbjct: 283 APCCYEK 289
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 APCCHQR 8
APCC+++
Sbjct: 283 APCCYEK 289
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 APCCHQR 8
APCC+++
Sbjct: 282 APCCYEK 288
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 GAPCCHQRDE 10
G P C QR +
Sbjct: 272 GGPPCFQRSK 281
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 GAPCCHQR 8
G PCC R
Sbjct: 528 GNPCCIDR 535
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 GAPCCH 6
GAP CH
Sbjct: 566 GAPPCH 571
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 GAPCCHQR 8
G PCC R
Sbjct: 532 GNPCCIDR 539
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CCHQRD 9
CC RD
Sbjct: 293 CCRHRD 298
>sp|VNB_INBBE|GLYCOPROTEIN NB|Influenza B virus (strain B/Beijing/1/1987)
Query: 3 PCCHQRDE 10
P C++RD+
Sbjct: 66 PLCNKRDD 73
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GAPCCH 6
GAP CH
Sbjct: 566 GAPPCH 571
>sp|VNB_INBOR|GLYCOPROTEIN NB|Influenza B virus (strain B/Oregon/5/1980)
Query: 3 PCCHQRDE 10
P C++RD+
Sbjct: 67 PFCNKRDD 74
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 4 CCHQRD 9
CC RD
Sbjct: 293 CCRHRD 298
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 APCCH 6
A CCH
Sbjct: 3229 AACCH 3233
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 APCCH 6
A CCH
Sbjct: 3229 AACCH 3233
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 GAPCCHQRD 9
GAP QR+
Sbjct: 533 GAPSAEQRE 541
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 PCCHQRD 9
PCC++++
Sbjct: 284 PCCYEKN 290
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 PCCHQRD 9
PCC++++
Sbjct: 285 PCCYEKE 291
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 APCCH 6
A CCH
Sbjct: 3206 AACCH 3210
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 PCCHQRD 9
PCC++++
Sbjct: 284 PCCYEKN 290
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 PCCHQRD 9
PCC++++
Sbjct: 284 PCCYEKN 290
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 PCCHQRD 9
PCC++++
Sbjct: 285 PCCYEKE 291
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PCCHQ 7
PC HQ
Sbjct: 210 PCLHQ 214
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PCCHQ 7
PC HQ
Sbjct: 210 PCLHQ 214
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PCCHQ 7
PC HQ
Sbjct: 211 PCLHQ 215
>sp|VNB_INBSI|GLYCOPROTEIN NB|Influenza B virus (strain B/Singapore/222/1979)
Query: 3 PCCHQRDE 10
P C++RD+
Sbjct: 67 PFCNKRDD 74
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 APCCH 6
A CCH
Sbjct: 3206 AACCH 3210
>sp|VNB_INBMF|GLYCOPROTEIN NB|Influenza B virus (strain B/Memphis/3/1989)
Query: 3 PCCHQRDE 10
P C++RD+
Sbjct: 66 PFCNKRDD 73
>sp|VNB_INBHK|GLYCOPROTEIN NB|Influenza B virus (strain B/Hong
Query: 3 PCCHQRDE 10
P C++RD+
Sbjct: 67 PFCNKRDD 74
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 GAPCCHQR 8
GAP H+R
Sbjct: 1240 GAPYVHKR 1247
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 GAPCCHQRDE 10
GAP +RD+
Sbjct: 727 GAPVPEKRDD 736
>sp|VNB_INBME|GLYCOPROTEIN NB|Influenza B virus (strain B/Memphis/6/1986)
Query: 3 PCCHQRDE 10
P C++RD+
Sbjct: 66 PFCNKRDD 73
>sp|VNB_INBLN|GLYCOPROTEIN NB|Influenza B virus (strain B/Leningrad/179/1986)
Query: 3 PCCHQRDE 10
P C++RD+
Sbjct: 66 PFCNKRDD 73
>sp|VNB_INBUS|GLYCOPROTEIN NB|Influenza B virus (strain B/USSR/100/1983)
Query: 3 PCCHQRDE 10
P C++RD+
Sbjct: 67 PFCNKRDD 74
>sp|VNB_INBVI|GLYCOPROTEIN NB|Influenza B virus (strain B/Victoria/3/1985)
Query: 3 PCCHQRDE 10
P C++RD+
Sbjct: 66 PFCNKRDD 73
>sp|VNB_INBMD|GLYCOPROTEIN NB|Influenza B virus (strain B/Maryland/1959)
Query: 3 PCCHQRDE 10
P C++RD+
Sbjct: 67 PFCNKRDD 74
>sp|PG154_MONPV|PROTEIN OPG154|Monkeypox virus (MPXV)
Query: 4 CCHQRDE 10
CC + DE
Sbjct: 71 CCKRNDE 77
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 GAPCCHQRDE 10
GAP + RD+
Sbjct: 716 GAPVPNSRDD 725
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 PCCHQRD 9
PCC++++
Sbjct: 283 PCCYEKN 289
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 3 PCCHQRD 9
PCC++++
Sbjct: 282 PCCYEKN 288
>sp|PG154_VACCC|PROTEIN OPG154|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CCHQRDE 10
CC + DE
Sbjct: 71 CCKRNDE 77
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 PCCHQR 8
PCC+++
Sbjct: 293 PCCYEK 298
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 PCCHQR 8
PCC+++
Sbjct: 293 PCCYEK 298
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 PCCHQRD 9
PCC++++
Sbjct: 285 PCCYEKE 291
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 CCHQRDE 10
CC +R+E
Sbjct: 677 CCVKREE 683
>sp|VFUS_VACC6|14 kDa fusion protein|Vaccinia virus (strain WR 65-16)
Query: 4 CCHQRDE 10
CC + DE
Sbjct: 97 CCKRNDE 103
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 PCCHQRD 9
PCC++ +
Sbjct: 292 PCCYENN 298
>sp|VNB_INBLE|GLYCOPROTEIN NB|Influenza B virus (strain B/Lee/1940)
Query: 3 PCCHQRDE 10
P C++RD+
Sbjct: 67 PFCNKRDD 74
97|SequenceR|490|481|VNCTYGAPCC
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 NCTYGAP 8
NCT+GAP
Sbjct: 1638 NCTFGAP 1644
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 NCTYGAP 8
NCT+GAP
Sbjct: 1638 NCTFGAP 1644
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 4 TYGAPCC 10
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 4 TYGAPCC 10
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 4 TYGAPCC 10
TYG P C
Sbjct: 160 TYGYPAC 166
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 4 TYGAPCC 10
T+G P C
Sbjct: 159 TFGYPSC 165
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CTYGA 7
CT+GA
Sbjct: 307 CTFGA 311
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 2 NCTYGAPC 9
NC + PC
Sbjct: 128 NCDFMHPC 135
98|SequenceR|495|486|CSRAKVNCTY
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 3 RAKVNCTY 10
RA+ +C Y
Sbjct: 209 RARASCKY 216
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 3 RAKVNCTY 10
RA+ +C Y
Sbjct: 209 RARASCKY 216
>sp|PG161_VACCC|PROTEIN OPG161|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SRAKVNCT 9
S AK NCT
Sbjct: 120 SDAKANCT 127
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 3 RAKVNCTY 10
RAK +C Y
Sbjct: 209 RAKGSCKY 216
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 3 RAKVNCTY 10
RAK +C Y
Sbjct: 209 RAKGSCKY 216
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 3 RAKVNCTY 10
RAK +C Y
Sbjct: 208 RAKGSCKY 215
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 3 RAKVNCTY 10
RAK +C Y
Sbjct: 209 RAKGSCKY 216
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 3 RAKVNCTY 10
RAK +C Y
Sbjct: 209 RAKGSCKY 216
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 3 RAKVNCTY 10
RAK +C Y
Sbjct: 209 RAKGSCKY 216
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 CSRAKVNC 8
C + K NC
Sbjct: 428 CGKPKKNC 435
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CSRAKVNC 8
C RA V C
Sbjct: 241 CLRAMVQC 248
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 1 CSRAKVNCTY 10
C++A V C +
Sbjct: 157 CTQASVPCVH 166
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 3 RAKVNCTY 10
RAK+ TY
Sbjct: 936 RAKIKVTY 943
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 1 CSRAKVNCTY 10
C++A V C +
Sbjct: 137 CTQASVPCVH 146
>sp|GP42_EBVA8|GLYCOPROTEIN 42|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 KVNCTY 10
K NCTY
Sbjct: 96 KANCTY 101
>sp|GP42_EBVG|GLYCOPROTEIN 42|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 KVNCTY 10
K NCTY
Sbjct: 96 KANCTY 101
>sp|GP42_EBVB9|GLYCOPROTEIN 42|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 KVNCTY 10
K NCTY
Sbjct: 96 KANCTY 101
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 1 CSRAKVNCTY 10
C++A V C +
Sbjct: 162 CTQASVPCVH 171
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 KVNCT 9
K+NCT
Sbjct: 291 KINCT 295
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 1 CSRAKVNCT 9
CS ++++C+
Sbjct: 161 CSDSQIDCS 169
99|SequenceR|500|491|VVEKECSRAK
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 4 KECSRA 9
+ECSRA
Sbjct: 1714 EECSRA 1719
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 1 VVEKECSR 8
++EK C+R
Sbjct: 124 LIEKSCNR 131
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 EKECSRAK 10
EKE +RAK
Sbjct: 1869 EKEFARAK 1876
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 VVEKECS 7
+VE ECS
Sbjct: 18 IVEAECS 24
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 VVEKECS 7
+VE ECS
Sbjct: 18 IVEAECS 24
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 3 EKECS 7
EKECS
Sbjct: 297 EKECS 301
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 VVEKEC 6
VVE+EC
Sbjct: 834 VVEEEC 839
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 VVEKECS 7
+VE ECS
Sbjct: 18 IVEAECS 24
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 VVEKECSRA 9
VV+K SRA
Sbjct: 1496 VVDKHISRA 1504
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 VVEKEC 6
+VE+EC
Sbjct: 843 IVEEEC 848
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 VVEKEC 6
V+E+EC
Sbjct: 835 VIEEEC 840
100|SequenceR|505|496|APQASVVEKE
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 2 PQASVVEKE 10
P SVVE+E
Sbjct: 446 PVTSVVERE 454
>sp|VE7_HPV38|PROTEIN E7|Human papillomavirus 38
Query: 3 QASVVEKE 10
+ASVVE+E
Sbjct: 36 EASVVEEE 43
101|SequenceR|510|501|RALFTAPQAS
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RALFTAPQA 9
RA++T+P A
Sbjct: 409 RAMYTSPIA 417
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 ALFTAPQAS 10
LF+AP+ S
Sbjct: 1070 GLFSAPKVS 1078
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 RALFTAP 7
R+LF AP
Sbjct: 784 RSLFVAP 790
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 RALFTAP 7
R+LF AP
Sbjct: 784 RSLFVAP 790
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 RALFTAP 7
R+LF AP
Sbjct: 784 RSLFVAP 790
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 ALFTAPQAS 10
LF+AP+ S
Sbjct: 1069 GLFSAPRVS 1077
102|SequenceR|515|506|GVHPSRALFT
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VHPSRALFT 10
+ P RAL+T
Sbjct: 305 IGPGRALYT 313
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 3 HPSRA 7
HPSRA
Sbjct: 259 HPSRA 263
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 GVHPSRAL 8
G HPS+ +
Sbjct: 359 GFHPSKKI 366
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 4 PSRALF 9
P+RALF
Sbjct: 1089 PNRALF 1094
103|SequenceR|520|511|EVDKVGVHPS
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 EVDKVGVHPS 10
EVD+ +HPS
Sbjct: 684 EVDRFDLHPS 693
>sp|M1_I30A0|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 5 VGVHPS 10
+G+HPS
Sbjct: 219 IGIHPS 224
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 EVDKVGVHPS 10
E +VGV PS
Sbjct: 651 EASEVGVRPS 660
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 KVGVHPS 10
K+G HP+
Sbjct: 36 KIGFHPT 42
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KVGVHPS 10
K+G HP+
Sbjct: 36 KIGFHPT 42
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 4 KVGVHPS 10
K+G HP+
Sbjct: 36 KIGFHPT 42
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 KVGVHP 9
K+G HP
Sbjct: 457 KIGAHP 462
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 EVDKVGVHP 9
E D V VHP
Sbjct: 1504 ETDLVRVHP 1512
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 EVDKVGVHP 9
E D V VHP
Sbjct: 1504 ETDLVRVHP 1512
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 DKVGVHP 9
DK VHP
Sbjct: 2634 DKTDVHP 2640
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 DKVGVHP 9
+KVG HP
Sbjct: 2577 NKVGGHP 2583
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 EVDKVGVHPS 10
++D V VHP+
Sbjct: 1498 DIDLVRVHPN 1507
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 EVDKVGVHP 9
E DK+ HP
Sbjct: 482 ETDKLHWHP 490
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 VDKVGVHPS 10
+D+VG H S
Sbjct: 386 LDQVGKHKS 394
104|SequenceR|525|516|HGEGCEVDKV
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 1 HGEGCEVDKV 10
HG+ E+DK+
Sbjct: 425 HGKVLEIDKI 434
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 HGEGCEVDKV 10
HG+ E+DK+
Sbjct: 425 HGKVLEIDKI 434
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 GEGCEVD 8
GE CE D
Sbjct: 911 GESCEAD 917
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 GEGCEVD 8
GE CE+D
Sbjct: 651 GERCELD 657
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 EGCEVD 8
E CEVD
Sbjct: 1903 EACEVD 1908
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 EGCEVD 8
E CEVD
Sbjct: 1895 EACEVD 1900
>sp|PG170_MONPV|PROTEIN OPG170|Monkeypox virus (MPXV)
Query: 5 CEVDK 9
CEVDK
Sbjct: 134 CEVDK 138
>sp|REV_HV2UC|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 3 EGCEVD 8
EGCE D
Sbjct: 115 EGCERD 120
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 EGCEVD 8
E CE+D
Sbjct: 1894 EACEID 1899
>sp|PG170_VAR67|PROTEIN OPG170|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 CEVDK 9
CEVDK
Sbjct: 132 CEVDK 136
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 HGEGC 5
H EGC
Sbjct: 248 HAEGC 252
>sp|PG170_VACCC|PROTEIN OPG170|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CEVDK 9
CEVDK
Sbjct: 132 CEVDK 136
>sp|VE6_HPV6A|PROTEIN E6|Human papillomavirus type 6a
Query: 1 HGEGCEVDKV 10
H CEV+KV
Sbjct: 108 HKPLCEVEKV 117
>sp|VE6_HPV6B|PROTEIN E6|Human papillomavirus type 6b
Query: 1 HGEGCEVDKV 10
H CEV+KV
Sbjct: 108 HKPLCEVEKV 117
>sp|PG058_VACCP|PROTEIN OPG058|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 GCEVD 8
GC+VD
Sbjct: 48 GCDVD 52
>sp|PG058_VACCC|PROTEIN OPG058|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GCEVD 8
GC+VD
Sbjct: 48 GCDVD 52
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 HGEGCEVDKV 10
HG+ +VD V
Sbjct: 2222 HGKAYDVDMV 2231
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 GEGCEVD 8
GE C++D
Sbjct: 649 GERCDLD 655
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 GEGCEVD 8
GE C++D
Sbjct: 649 GERCDLD 655
105|SequenceR|530|521|NDHCFHGEGC
>sp|VGF_VARV|PRO-VARIOLA growth factor|Variola virus
Query: 1 NDHCFHG 7
N +CFHG
Sbjct: 50 NGYCFHG 56
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 4 CFHGEGC 10
CFH GC
Sbjct: 294 CFHDVGC 300
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 4 CFHG 7
CFHG
Sbjct: 231 CFHG 234
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 HCFHGEG 9
+CF+ EG
Sbjct: 943 YCFNAEG 949
>sp|VGF_VAR67|PRO-VARIOLA growth factor|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 HCFHG 7
+CFHG
Sbjct: 52 YCFHG 56
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 3 HCFHGE 8
HC GE
Sbjct: 235 HCLQGE 240
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 3 HCFHGE 8
HC GE
Sbjct: 235 HCLQGE 240
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 HCFHGE 8
HC GE
Sbjct: 235 HCLQGE 240
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 HCFHGE 8
HC GE
Sbjct: 235 HCLQGE 240
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 4 CFHGEGC 10
C HGE C
Sbjct: 1045 CCHGEDC 1051
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 4 CFHGEGC 10
C HGE C
Sbjct: 1044 CCHGEDC 1050
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 4 CFHGEGC 10
C HGE C
Sbjct: 1045 CCHGEDC 1051
>sp|US36_HCMVA|UNCHARACTERIZED protein US36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NDHCF 5
N+HCF
Sbjct: 31 NNHCF 35
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 3 HCFHGEG 9
+CF+ EG
Sbjct: 943 YCFNAEG 949
Query: 1 NDHCFH 6
N H FH
Sbjct: 6326 NKHAFH 6331
>sp|UL39_HCMVA|UNCHARACTERIZED protein UL39|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NDHCFHGEG 9
N H HG G
Sbjct: 96 NAHSVHGPG 104
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HSFNSSGC 452
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HSFNSSGC 452
>sp|YVFC_VACCC|UNCHARACTERIZED 11.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 HCFHG 7
HCF+G
Sbjct: 16 HCFYG 20
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NDHCFHGEG 9
ND F+G G
Sbjct: 227 NDKTFNGTG 235
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 2 DHCFHGEG 9
D FH EG
Sbjct: 150 DFAFHKEG 157
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 2 DHCFHGEG 9
D FH EG
Sbjct: 150 DFAFHKEG 157
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 DHCFHGEG 9
D FH EG
Sbjct: 150 DFAFHKEG 157
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 DHCFHGEG 9
D FH EG
Sbjct: 150 DFAFHKEG 157
>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 DHCFHGEG 9
D FH EG
Sbjct: 150 DFAFHKEG 157
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 2 DHCFHGEG 9
D FH EG
Sbjct: 150 DFAFHKEG 157
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 DHCFHGEG 9
D FH EG
Sbjct: 150 DFAFHKEG 157
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 DHCFHGEG 9
D FH EG
Sbjct: 150 DFAFHKEG 157
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 DHCFHGEG 9
D FH EG
Sbjct: 150 DFAFHKEG 157
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 2 DHCFHGEG 9
D FH EG
Sbjct: 150 DFAFHKEG 157
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 NDHCFHGEG 9
N H HG G
Sbjct: 1338 NGHMLHGGG 1346
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 NDHCFHGEG 9
N H HG G
Sbjct: 1358 NGHMLHGGG 1366
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 NDHCF 5
+DHCF
Sbjct: 463 SDHCF 467
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 NDHCF 5
+DHCF
Sbjct: 463 SDHCF 467
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 NDHCFHGEG 9
N H HG G
Sbjct: 1388 NGHMLHGGG 1396
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 NDHCFH 6
N+H FH
Sbjct: 6007 NNHAFH 6012
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NDHCF 5
ND CF
Sbjct: 2219 NDQCF 2223
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NDHCF 5
ND CF
Sbjct: 2219 NDQCF 2223
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 NDHCFHGEG 9
N H HG G
Sbjct: 1388 NGHMLHGGG 1396
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 NDHCFHGEG 9
N H HG G
Sbjct: 1338 NGHMLHGGG 1346
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 NDHCFHGEG 9
N H HG G
Sbjct: 1358 NGHMLHGGG 1366
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 HCFHGEGC 10
HC GC
Sbjct: 3244 HCISAIGC 3251
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DHCFHGEG 9
D C+H E
Sbjct: 237 DGCYHSEA 244
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DHCFHGEG 9
D C+H E
Sbjct: 237 DGCYHSEA 244
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 DHCFHGEG 9
D C+H E
Sbjct: 237 DGCYHSEA 244
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NDHCFHGEG 9
N H HG G
Sbjct: 1301 NGHMVHGGG 1309
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 4 CFHGEGC 10
C H GC
Sbjct: 318 CVHDAGC 324
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NDHCFHGEG 9
N H HG G
Sbjct: 1301 NGHMVHGGG 1309
Query: 1 NDHCFH 6
N H FH
Sbjct: 6316 NKHAFH 6321
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 NDHCFHGEGC 10
N ++G GC
Sbjct: 144 NGAMYYGSGC 153
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 NDHCFH 6
N H FH
Sbjct: 6347 NKHAFH 6352
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNASGC 452
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NDHCFHGEG 9
ND F+G G
Sbjct: 227 NDKKFNGSG 235
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 DHCFH 6
D CFH
Sbjct: 6 DACFH 10
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 HCFHGEGC 10
+C H E C
Sbjct: 346 YCHHTEPC 353
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 NDHCFHG 7
ND+ +HG
Sbjct: 94 NDNSWHG 100
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 NDHCFH 6
N H FH
Sbjct: 6324 NKHAFH 6329
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NDHCFHGEGC 10
N ++G GC
Sbjct: 144 NGAMYYGSGC 153
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 4 CFHG 7
CFHG
Sbjct: 23 CFHG 26
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HRFNASGC 452
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HRFNASGC 452
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 3 HCFHGEGC 10
HC +GC
Sbjct: 425 HCIFPDGC 432
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNSSGC 452
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 446 HKFNSSGC 453
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNSSGC 452
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNSSGC 452
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNSSGC 452
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNSSGC 452
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNSSGC 452
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNSSGC 452
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNSSGC 452
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 444 HKFNSSGC 451
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNSSGC 452
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNSSGC 452
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNSSGC 452
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 445 HKFNSSGC 452
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 446 HKFNASGC 453
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 3 HCFHGEGC 10
H F+ GC
Sbjct: 446 HKFNASGC 453
>sp|ORF3_MERS1|NON-STRUCTURAL protein ORF3|Middle East respiratory syndrome-related coronavirus
Query: 2 DHCFHGEGC 10
+HC + GC
Sbjct: 30 EHCQNYSGC 38
106|SequenceR|535|526|RCCTQNDHCF
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 CTQNDH 8
C QNDH
Sbjct: 1949 CEQNDH 1954
>sp|VFUS_VACC6|14 kDa fusion protein|Vaccinia virus (strain WR 65-16)
Query: 1 RCCTQND 7
+CC +ND
Sbjct: 96 KCCKRND 102
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 CTQNDHC 9
C QND C
Sbjct: 145 CIQNDSC 151
>sp|PG154_VAR67|PROTEIN OPG154|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RCCTQND 7
+CC +ND
Sbjct: 70 KCCKRND 76
>sp|PG154_VACCC|PROTEIN OPG154|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RCCTQND 7
+CC +ND
Sbjct: 70 KCCKRND 76
>sp|PG154_MONPV|PROTEIN OPG154|Monkeypox virus (MPXV)
Query: 1 RCCTQND 7
+CC +ND
Sbjct: 70 KCCKRND 76
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka
Query: 1 RCCTQNDHC 9
RCC + HC
Sbjct: 60 RCCGELIHC 68
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 RCCTQNDHC 9
RCC + HC
Sbjct: 60 RCCGELIHC 68
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 2 CCTQNDHC 9
CC HC
Sbjct: 174 CCLYKQHC 181
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 RCCTQNDHCF 10
+CC + CF
Sbjct: 690 KCCNLFEACF 699
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 RCCTQNDHCF 10
+CC + CF
Sbjct: 690 KCCNLFEACF 699
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 RCCTQNDHCF 10
+CC + CF
Sbjct: 690 KCCNLFEACF 699
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 RCCTQNDHCF 10
+CC + CF
Sbjct: 690 KCCNLFEACF 699
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CCTQNDHCF 10
CC+Q+D +
Sbjct: 5010 CCSQSDRFY 5018
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 RCCTQNDHCF 10
RC T N F
Sbjct: 1289 RCVTSNTEVF 1298
Query: 3 CTQNDH 8
CT+ DH
Sbjct: 837 CTEVDH 842
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 CTQNDHCF 10
C QN CF
Sbjct: 66 CIQNKRCF 73
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 1 RCCTQN 6
RC TQN
Sbjct: 464 RCPTQN 469
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CCTQNDH 8
CC +++H
Sbjct: 230 CCREHEH 236
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CCTQNDH 8
CC +++H
Sbjct: 230 CCREHEH 236
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 3 CTQNDHC 9
C QN HC
Sbjct: 1275 CFQNIHC 1281
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 3 CTQNDHC 9
C Q D C
Sbjct: 23 CVQGDWC 29
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 3 CTQNDHC 9
C Q D C
Sbjct: 23 CVQGDWC 29
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 3 CTQNDHC 9
C Q D C
Sbjct: 23 CVQGDWC 29
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 3 CTQNDHC 9
C Q D C
Sbjct: 23 CVQGDWC 29
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 CCTQNDHC 9
CC D C
Sbjct: 409 CCNWLDRC 416
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 CCTQNDH 8
CC DH
Sbjct: 537 CCFYADH 543
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 CCTQNDH 8
CC DH
Sbjct: 537 CCFYADH 543
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 CCTQNDH 8
CC DH
Sbjct: 537 CCFYADH 543
107|SequenceR|540|531|GQRNDRCCTQ
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GQRNDRCC 8
G+R DR C
Sbjct: 3332 GKREDRWC 3339
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 QRNDRCCT 9
++NDR C+
Sbjct: 55 RQNDRACS 62
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 GQRNDR 6
GQR DR
Sbjct: 482 GQRQDR 487
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 GQRNDR 6
GQR DR
Sbjct: 482 GQRQDR 487
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 GQRNDR 6
GQR DR
Sbjct: 482 GQRQDR 487
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 6 RCCT 9
RCCT
Sbjct: 824 RCCT 827
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 6 RCCT 9
RCCT
Sbjct: 824 RCCT 827
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 6 RCCT 9
RCCT
Sbjct: 522 RCCT 525
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 6 RCCT 9
RCCT
Sbjct: 522 RCCT 525
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 GQRNDR 6
GQR DR
Sbjct: 482 GQRQDR 487
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 GQRNDR 6
GQR DR
Sbjct: 482 GQRQDR 487
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 GQRNDR 6
GQR DR
Sbjct: 482 GQRQDR 487
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 5 DRCCTQ 10
D CCT+
Sbjct: 306 DSCCTR 311
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 5 DRCCTQ 10
D CCT+
Sbjct: 308 DSCCTR 313
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 NDRCC 8
ND CC
Sbjct: 5813 NDYCC 5817
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 5 DRCCTQ 10
++CCT+
Sbjct: 1374 NKCCTR 1379
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 DRCCTQ 10
++CCT+
Sbjct: 1374 NKCCTR 1379
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 DRCCTQ 10
++CCT+
Sbjct: 1374 NKCCTR 1379
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 3 RNDRCCT 9
R D CCT
Sbjct: 692 RFDLCCT 698
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 NDRCC 8
ND CC
Sbjct: 290 NDTCC 294
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 QRNDRCCT 9
Q ND C T
Sbjct: 510 QDNDSCLT 517
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 2 QRNDRCCT 9
Q ND C T
Sbjct: 510 QDNDSCLT 517
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 QRNDRCCT 9
Q +CCT
Sbjct: 687 QMYQKCCT 694
108|SequenceR|545|536|PCCAWGQRND
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 CCAWGQ 7
CCA+G+
Sbjct: 101 CCAYGE 106
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 4 AWGQR 8
AWGQR
Sbjct: 508 AWGQR 512
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 CAWGQRND 10
CAW +ND
Sbjct: 3500 CAWFVQND 3507
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 CAWGQRND 10
CAW +ND
Sbjct: 3520 CAWFVQND 3527
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 CAWGQRND 10
CAW +ND
Sbjct: 3550 CAWFVQND 3557
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 CCAWGQR 8
CCAW R
Sbjct: 774 CCAWHVR 780
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 CAWGQRND 10
CAW +ND
Sbjct: 3500 CAWFVQND 3507
Query: 2 CCAWGQR 8
CC+ G R
Sbjct: 5048 CCSHGDR 5054
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 CAWGQRND 10
CAW +ND
Sbjct: 3520 CAWFVQND 3527
Query: 2 CCAWGQR 8
CC+ G R
Sbjct: 5068 CCSHGDR 5074
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 CAWGQRND 10
CAW +ND
Sbjct: 3550 CAWFVQND 3557
Query: 2 CCAWGQR 8
CC+ G R
Sbjct: 5098 CCSHGDR 5104
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 3 CAWGQ 7
C WGQ
Sbjct: 540 CHWGQ 544
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CAWGQ 7
C WGQ
Sbjct: 863 CHWGQ 867
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PCCAW 5
P CAW
Sbjct: 1281 PKCAW 1285
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PCCAW 5
P CAW
Sbjct: 1281 PKCAW 1285
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PCCAW 5
P CAW
Sbjct: 1281 PKCAW 1285
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 CCAWGQ 7
CC W +
Sbjct: 912 CCFWSE 917
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 CCAWGQ 7
CC W +
Sbjct: 912 CCFWSE 917
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 2 CCAWGQ 7
CC W Q
Sbjct: 14 CCGWFQ 19
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 3 CAWGQ 7
CAW Q
Sbjct: 382 CAWNQ 386
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 3 CAWGQ 7
CAW Q
Sbjct: 382 CAWNQ 386
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 3 CAWGQ 7
CAW Q
Sbjct: 382 CAWNQ 386
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 3 CAWGQ 7
CAW Q
Sbjct: 382 CAWNQ 386
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 3 CAWGQ 7
CAW Q
Sbjct: 382 CAWNQ 386
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 5 WGQRND 10
W Q ND
Sbjct: 220 WNQNND 225
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 PCCAW 5
PC AW
Sbjct: 724 PCAAW 728
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 5 WGQRN 9
WG+RN
Sbjct: 5 WGRRN 9
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 PCCAWGQR 8
P C W R
Sbjct: 3254 PGCGWSVR 3261
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 PCCAWGQR 8
P C W R
Sbjct: 3255 PGCGWSVR 3262
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 PCCAWGQR 8
P C W R
Sbjct: 3254 PGCGWSVR 3261
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 PCCAWGQR 8
P C W R
Sbjct: 3254 PGCGWSVR 3261
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 PCCAWGQR 8
P C W R
Sbjct: 3254 PGCGWSVR 3261
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 PCCAWGQR 8
P C W R
Sbjct: 3254 PGCGWSVR 3261
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 PCCAWGQR 8
P C W R
Sbjct: 3254 PGCGWSVR 3261
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 PCCAWGQR 8
P C W R
Sbjct: 3256 PGCGWSVR 3263
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 PCCAWGQR 8
P C W R
Sbjct: 3256 PGCGWSVR 3263
109|SequenceR|550|541|VGQRYPCCAW
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 VGQRYPC 7
+ +RYPC
Sbjct: 1099 LARRYPC 1105
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 VGQRYPC 7
+ +RYPC
Sbjct: 1099 LARRYPC 1105
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 VGQRYPC 7
+ +RYPC
Sbjct: 1099 LARRYPC 1105
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 VGQRYPC 7
+ +RYPC
Sbjct: 1099 LSRRYPC 1105
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 YPCC 8
YPCC
Sbjct: 26 YPCC 29
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 YPCC 8
YPCC
Sbjct: 26 YPCC 29
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 YPCC 8
YPCC
Sbjct: 26 YPCC 29
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 QRYPCCAW 10
+R+P CA+
Sbjct: 2483 ERFPLCAF 2490
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 QRYPCCAW 10
+R+P CA+
Sbjct: 2483 ERFPLCAF 2490
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 VGQRYP 6
VG RYP
Sbjct: 417 VGDRYP 422
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 VGQRYP 6
VG RYP
Sbjct: 417 VGDRYP 422
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 GQRYPCC 8
G RYP C
Sbjct: 132 GTRYPLC 138
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 2 GQRYPCCAW 10
G+R P C W
Sbjct: 1013 GRRDPKCQW 1021
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 VGQRYPCCA 9
V Q YP CA
Sbjct: 3168 VFQVYPICA 3176
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 VGQRYPCCA 9
V Q YP CA
Sbjct: 3118 VFQVYPICA 3126
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 VGQRYPCCA 9
V Q YP CA
Sbjct: 3138 VFQVYPICA 3146
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 VGQRYPCCA 9
V Q YP CA
Sbjct: 3168 VFQVYPICA 3176
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 VGQRYPCCA 9
V Q YP CA
Sbjct: 3138 VFQVYPICA 3146
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 VGQRYPCCA 9
V Q YP CA
Sbjct: 3118 VFQVYPICA 3126
>sp|E316_ADE03|EARLY E3 16 kDa glycoprotein|Human adenovirus B serotype 3
Query: 6 PCCAW 10
PCCA+
Sbjct: 128 PCCAY 132
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GQRYPC 7
G+R PC
Sbjct: 79 GERVPC 84
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GQRYPC 7
G+R PC
Sbjct: 79 GERVPC 84
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 6 PCCAW 10
PCC++
Sbjct: 552 PCCSF 556
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 6 PCCAW 10
PCC++
Sbjct: 537 PCCSF 541
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GQRYPC 7
G+R PC
Sbjct: 79 GERVPC 84
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 5 YPCCA 9
Y CCA
Sbjct: 59 YACCA 63
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 5 YPCCA 9
YP CA
Sbjct: 616 YPACA 620
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 6 PCCAW 10
PC AW
Sbjct: 724 PCAAW 728
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 5 YPCCA 9
Y CCA
Sbjct: 59 YSCCA 63
>sp|US02_HHV11|PROTEIN US2|Human herpesvirus 1 (strain 17)
Query: 4 RYPCCA 9
R PCCA
Sbjct: 241 RRPCCA 246
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human
Query: 5 YPCCA 9
Y CCA
Sbjct: 59 YTCCA 63
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 5 YPCCAW 10
Y CC W
Sbjct: 80 YACCRW 85
110|SequenceR|555|546|RDACCVGQRY
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 RDACCVGQ 8
RD CCV +
Sbjct: 1425 RDNCCVKE 1432
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RDACC 5
RDACC
Sbjct: 459 RDACC 463
>sp|ORF32_VZVO|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RDACCVGQ 8
RD C VGQ
Sbjct: 57 RDVCSVGQ 64
>sp|ORF32_VZVD|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RDACCVGQ 8
RD C VGQ
Sbjct: 57 RDVCSVGQ 64
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 RDACC 5
RDACC
Sbjct: 460 RDACC 464
>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 5 CVGQRY 10
C GQRY
Sbjct: 55 CEGQRY 60
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 5 CVGQRY 10
C GQRY
Sbjct: 55 CEGQRY 60
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 5 CVGQRY 10
C GQRY
Sbjct: 55 CEGQRY 60
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 RDACCVGQ 8
+D CCV +
Sbjct: 1425 KDNCCVKE 1432
>sp|NEF_HV2NZ|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 5 CVGQRY 10
C GQRY
Sbjct: 55 CEGQRY 60
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 1 RDACC 5
+DACC
Sbjct: 443 KDACC 447
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 DACCVGQR 9
D+C VG++
Sbjct: 181 DSCLVGRK 188
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 DACCVGQR 9
D+C VG++
Sbjct: 1512 DSCLVGRK 1519
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 DACCVGQRY 10
D CC ++Y
Sbjct: 3365 DDCCPLEKY 3373
111|SequenceR|560|551|PCCHRRDACC
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 2 CCHRRD 7
CC+R+D
Sbjct: 170 CCYRKD 175
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 CCHRRD 7
CC+R+D
Sbjct: 170 CCYRKD 175
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 5 RRDACC 10
+RD CC
Sbjct: 210 KRDDCC 215
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 PCCHRR 6
P CH+R
Sbjct: 274 PLCHQR 279
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 CHRRDA 8
CHR D+
Sbjct: 300 CHREDS 305
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 CHRRDA 8
CHR D+
Sbjct: 300 CHREDS 305
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 HRRDACC 10
H RDA C
Sbjct: 1651 HYRDALC 1657
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 3 CHRRDA 8
CHR D+
Sbjct: 300 CHREDS 305
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 CCHRRDA 8
CC RRDA
Sbjct: 164 CCARRDA 170
>sp|PG154_VAR67|PROTEIN OPG154|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CCHRRD 7
CC R D
Sbjct: 71 CCKRND 76
>sp|PG154_VACCC|PROTEIN OPG154|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CCHRRD 7
CC R D
Sbjct: 71 CCKRND 76
>sp|PG154_MONPV|PROTEIN OPG154|Monkeypox virus (MPXV)
Query: 2 CCHRRD 7
CC R D
Sbjct: 71 CCKRND 76
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 CCHRRDA 8
CC RRDA
Sbjct: 164 CCARRDA 170
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 CCHRRDAC 9
CC+ +AC
Sbjct: 691 CCNLFEAC 698
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 CCHRRDAC 9
CC+ +AC
Sbjct: 691 CCNLFEAC 698
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 CCHRRDAC 9
CC+ +AC
Sbjct: 691 CCNLFEAC 698
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 CCHRRDAC 9
CC+ +AC
Sbjct: 691 CCNLFEAC 698
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CCHRRD 7
CC RD
Sbjct: 293 CCRHRD 298
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 3 CHRRDAC 9
C R DAC
Sbjct: 5 CQRLDAC 11
>sp|PG122_VAR67|MRNA-DECAPPING protein OPG122|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 CHRRDA 8
C+RRD+
Sbjct: 64 CNRRDS 69
>sp|PG122_VACCC|MRNA-DECAPPING protein OPG122|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CHRRDA 8
C+RRD+
Sbjct: 64 CNRRDS 69
>sp|PG122_MONPV|MRNA-DECAPPING protein OPG122|Monkeypox virus (MPXV)
Query: 3 CHRRDA 8
C+RRD+
Sbjct: 64 CNRRDS 69
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 2 CCHRRD 7
CC RD
Sbjct: 293 CCRHRD 298
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 CHRRDACC 10
CH + A C
Sbjct: 1175 CHGQQATC 1182
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 CHRRDACC 10
CH + A C
Sbjct: 1175 CHGQQATC 1182
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 CHRRDACC 10
CH + A C
Sbjct: 1175 CHGQQATC 1182
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 CCHRRDAC 9
CC+ D C
Sbjct: 409 CCNWLDRC 416
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 HRRDACC 10
HR DA C
Sbjct: 638 HRLDAAC 644
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 HRRDACC 10
HR DA C
Sbjct: 638 HRLDAAC 644
>sp|VFUS_VACC6|14 kDa fusion protein|Vaccinia virus (strain WR 65-16)
Query: 2 CCHRRD 7
CC R D
Sbjct: 97 CCKRND 102
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 HRRDACC 10
HR DA C
Sbjct: 638 HRLDAAC 644
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 4 HRRDACC 10
HR DA C
Sbjct: 638 HRLDAAC 644
112|SequenceR|565|556|CRFGAPCCHR
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 CRFGAPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 CRFGAPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 CRFGAPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 CRFGAPCC 8
C FG P C
Sbjct: 1182 CGFGGPTC 1189
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 CRFGAP 6
C FGAP
Sbjct: 1639 CTFGAP 1644
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 PCCH 9
PCCH
Sbjct: 27 PCCH 30
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 PCCH 9
PCCH
Sbjct: 27 PCCH 30
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 PCCH 9
PCCH
Sbjct: 27 PCCH 30
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CRFGAPCCHR 10
C FGAP R
Sbjct: 454 CGFGAPLLAR 463
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CRFGAPCCHR 10
C FGAP R
Sbjct: 454 CGFGAPLLAR 463
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CRFGAP 6
C FGAP
Sbjct: 1639 CTFGAP 1644
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GAPCC 8
G PCC
Sbjct: 4267 GVPCC 4271
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 6 PCCHR 10
PCC R
Sbjct: 30 PCCER 34
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 6 PCCHR 10
PCC R
Sbjct: 30 PCCER 34
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CRFGAP 6
C+FG P
Sbjct: 1584 CKFGIP 1589
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 CRFGAP 6
C+FG P
Sbjct: 1574 CKFGIP 1579
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 CRFGAP 6
C+FG P
Sbjct: 1574 CKFGIP 1579
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 4 GAPCCHR 10
GA CC R
Sbjct: 1370 GASCCVR 1376
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 4 GAPCCHR 10
GA CC R
Sbjct: 1370 GASCCVR 1376
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 PCCHR 10
PCC R
Sbjct: 30 PCCER 34
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 6 PCCHR 10
PCC R
Sbjct: 30 PCCER 34
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 GAPCCHR 10
GAP HR
Sbjct: 130 GAPAAHR 136
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 4 GAPCCH 9
GAP CH
Sbjct: 566 GAPPCH 571
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 4 GAPCC 8
G PCC
Sbjct: 528 GNPCC 532
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 APCCH 9
A CCH
Sbjct: 3229 AACCH 3233
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 4 GAPCC 8
G PCC
Sbjct: 532 GNPCC 536
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 GAPCCH 9
GAP CH
Sbjct: 566 GAPPCH 571
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 4 GAPCCHR 10
GAP HR
Sbjct: 143 GAPSAHR 149
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 GAPCCHR 10
GAP HR
Sbjct: 130 GAPATHR 136
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 APCCH 9
A CCH
Sbjct: 3229 AACCH 3233
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 APCCH 9
A CCH
Sbjct: 3206 AACCH 3210
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 4 GAPCCHR 10
GAP HR
Sbjct: 143 GAPSAHR 149
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 APCCH 9
A CCH
Sbjct: 3206 AACCH 3210
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 4 GAPCCHR 10
GAP HR
Sbjct: 130 GAPAAHR 136
>sp|P30II_HTL1A|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 3 FGAPCCH 9
F APC H
Sbjct: 8 FSAPCLH 14
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 5 APCCH 9
APCC+
Sbjct: 290 APCCY 294
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 GAPCCHR 10
GAP HR
Sbjct: 130 GAPAAHR 136
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 5 APCCH 9
APCC+
Sbjct: 290 APCCY 294
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 4 GAPCCHR 10
GAP HR
Sbjct: 143 GAPSAHR 149
>sp|P30II_HTL1C|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 3 FGAPCCH 9
F APC H
Sbjct: 8 FSAPCLH 14
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 GAPCCHR 10
GAP HR
Sbjct: 130 GAPATHR 136
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 5 APCCH 9
APCC+
Sbjct: 284 APCCY 288
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 APCCH 9
APCC+
Sbjct: 283 APCCY 287
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 5 APCCH 9
APCC+
Sbjct: 282 APCCY 286
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 APCCH 9
APCC+
Sbjct: 283 APCCY 287
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 4 GAPCCHR 10
GAP HR
Sbjct: 130 GAPATHR 136
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 APCCH 9
APCC+
Sbjct: 283 APCCY 287
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 5 APCCH 9
APCC+
Sbjct: 279 APCCY 283
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 6 PCCHR 10
PCC +
Sbjct: 30 PCCEK 34
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 CRFGAPCCH 9
CR C H
Sbjct: 216 CRLNCTCNH 224
113|SequenceR|570|561|TGRAACRFGA
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 RAACRFG 9
R AC+FG
Sbjct: 1581 RHACKFG 1587
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 RAACRFG 9
R AC+FG
Sbjct: 1581 RHACKFG 1587
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RAACRFG 9
R AC+FG
Sbjct: 1581 RHACKFG 1587
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RAACRFG 9
R AC+FG
Sbjct: 1581 RHACKFG 1587
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RAACRFG 9
R AC+FG
Sbjct: 1581 RHACKFG 1587
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RAACRFG 9
R AC+FG
Sbjct: 1581 RHACKFG 1587
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RAACRFG 9
R AC+FG
Sbjct: 1581 RHACKFG 1587
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 RAACRFG 9
R AC+FG
Sbjct: 1571 RHACKFG 1577
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 RAACRFG 9
R AC+FG
Sbjct: 1571 RHACKFG 1577
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 GRAACRFGA 10
GRAAC + A
Sbjct: 637 GRAACAYIA 645
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 GRAACRF 8
GRA+C F
Sbjct: 177 GRASCGF 183
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 RAACRFGA 10
+A CRFG
Sbjct: 335 QAWCRFGG 342
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 ACRFGA 10
ACR GA
Sbjct: 17 ACRLGA 22
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 TGRAAC 6
TGRAAC
Sbjct: 281 TGRAAC 286
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 ACRFGA 10
ACR GA
Sbjct: 17 ACRLGA 22
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 ACRFGA 10
ACR GA
Sbjct: 17 ACRLGA 22
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 6 CRFGA 10
CRFG+
Sbjct: 2968 CRFGS 2972
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 6 CRFGA 10
CRFG+
Sbjct: 2968 CRFGS 2972
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 TGRAACRF 8
TG CRF
Sbjct: 1141 TGNDICRF 1148
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 GRAACRFGA 10
G A CRF A
Sbjct: 149 GFAGCRFAA 157
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 GRAACR 7
RAACR
Sbjct: 2719 ARAACR 2724
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GRAACR 7
RAACR
Sbjct: 2719 ARAACR 2724
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 GRAACR 7
RAACR
Sbjct: 2719 ARAACR 2724
114|SequenceR|575|566|RRLCKTGRAA
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RLCKTGRAA 10
RLC+T RAA
Sbjct: 154 RLCRTDRAA 162
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 RRLCKTGR 8
RR+C +GR
Sbjct: 734 RRICLSGR 741
Query: 1 RRLCKTGR 8
R +C TGR
Sbjct: 134 RSVCNTGR 141
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 RRLCKTGR 8
RR+C +GR
Sbjct: 734 RRICLSGR 741
Query: 1 RRLCKTGR 8
R +C TGR
Sbjct: 134 RSVCNTGR 141
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 RRLCKT 6
RRLCK+
Sbjct: 302 RRLCKS 307
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 RRLCK 5
RRLCK
Sbjct: 866 RRLCK 870
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 3 LCKTGR 8
+CKTG+
Sbjct: 381 ICKTGK 386
>sp|VE7_HPV27|PROTEIN E7|Human papillomavirus 27
Query: 4 CKTGRA 9
CK GRA
Sbjct: 56 CKCGRA 61
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RLCKT 6
RLCKT
Sbjct: 752 RLCKT 756
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RLCKT 6
RLCKT
Sbjct: 751 RLCKT 755
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 1 RRLCKTGR 8
RRL TGR
Sbjct: 391 RRLFHTGR 398
115|SequenceR|580|571|WRPAERRLCK
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 WRPAERRLC 9
W+PA RR C
Sbjct: 83 WQPATRRRC 91
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 WRPAERRLC 9
W+P RR C
Sbjct: 75 WQPNYRRRC 83
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 WRPAERRLC 9
W+P RR C
Sbjct: 75 WQPNYRRRC 83
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 WRPAERRLCK 10
WRP+ CK
Sbjct: 30 WRPSTLTKCK 39
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 WRPAERRLC 9
W+P RR C
Sbjct: 75 WQPNYRRRC 83
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 WRPAERRLC 9
W+P RR C
Sbjct: 75 WQPNYRRRC 83
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 WRPAERRLCK 10
W P RLC+
Sbjct: 817 WVPRPPRLCQ 826
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 WRPAERRLCK 10
W P RLC+
Sbjct: 814 WVPRPPRLCQ 823
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 WRPAERRLCK 10
W P RLC+
Sbjct: 815 WVPRPPRLCQ 824
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 WRPAERRLCK 10
W P RLC+
Sbjct: 816 WVPRPPRLCQ 825
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 WRPAERRLCK 10
W P RLC+
Sbjct: 815 WVPRPPRLCQ 824
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 WRPAERRLCK 10
W P RLC+
Sbjct: 817 WVPRPPRLCQ 826
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 WRPAERRLCK 10
W P RLC+
Sbjct: 817 WVPRPPRLCQ 826
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 WRPAERRLCK 10
W P RLC+
Sbjct: 816 WVPRPPRLCE 825
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 WRPAERRLCK 10
W P RLC+
Sbjct: 815 WIPRPPRLCQ 824
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 WRPAERRLCK 10
W P RLC+
Sbjct: 815 WIPRPPRLCQ 824
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 WRPAERRLC 9
W+PA R C
Sbjct: 76 WQPAMTRRC 84
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 RPAERRLCK 10
RP R LCK
Sbjct: 1146 RPRIRYLCK 1154
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RPAERRLCK 10
RP R LCK
Sbjct: 1055 RPRIRYLCK 1063
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 WRPAERRLC 9
W P RLC
Sbjct: 817 WVPRAPRLC 825
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 1 WRPAERRLC 9
WRP E R C
Sbjct: 456 WRPGEWRAC 464
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 WRPAERRLC 9
WRP LC
Sbjct: 84 WRPLLEHLC 92
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 WRPAERRLC 9
W P RLC
Sbjct: 817 WVPRPPRLC 825
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 WRPAERRLC 9
W P RLC
Sbjct: 816 WVPRPPRLC 824
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 WRPAERRLC 9
W P RLC
Sbjct: 819 WVPRPPRLC 827
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 3 PAERRLCK 10
P+E R+C+
Sbjct: 31 PSETRVCR 38
>sp|PG067_VARV|PROTEIN OPG067|Variola virus
Query: 2 RPAERRLCK 10
RP + LCK
Sbjct: 306 RPVAKILCK 314
>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 RPAERRLCK 10
RP + LCK
Sbjct: 306 RPVAKILCK 314
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RPAERRLCK 10
RP + LCK
Sbjct: 306 RPVAKILCK 314
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 WRPAERRLCK 10
W+P R CK
Sbjct: 74 WQPDVVRFCK 83
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 WRPAERRLC 9
W P RLC
Sbjct: 819 WIPRPPRLC 827
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 WRPAERRLCK 10
W PA + C+
Sbjct: 73 WNPAVTKFCR 82
>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)
Query: 2 RPAERRLCK 10
RP + LCK
Sbjct: 306 RPVAKILCK 314
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 WRPAERRLCK 10
WR + + CK
Sbjct: 1068 WRFLKEKFCK 1077
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 WRPAERRLCK 10
WR + + CK
Sbjct: 1075 WRFLKEKFCK 1084
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 WRPAERRLCK 10
WR + + CK
Sbjct: 1075 WRFLKEKFCK 1084
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 WRPAERRLCK 10
WR + + CK
Sbjct: 1071 WRFLKEKFCK 1080
>sp|UL79_HHV6Z|PROTEIN U52|Human herpesvirus 6B (strain Z29)
Query: 3 PAERRLCK 10
PA R +CK
Sbjct: 179 PAVRLICK 186
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 WRPAERRLC 9
WR + +LC
Sbjct: 1084 WRFLKEKLC 1092
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 WRPAERRLCK 10
W+P LCK
Sbjct: 64 WQPDSIVLCK 73
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 3 PAERRLC 9
PAE R C
Sbjct: 77 PAEARAC 83
116|SequenceR|585|576|RLPADWRPAE
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 LPADWRPA 9
L DWRPA
Sbjct: 290 LQQDWRPA 297
>sp|NSS_SFSV|NON-STRUCTURAL protein NS-S|Sandfly fever sicilian virus (SFS)
Query: 2 LPADWRPA 9
LPA W PA
Sbjct: 76 LPASWGPA 83
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1541 LPKDWR 1546
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1561 LPKDWR 1566
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1591 LPKDWR 1596
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1541 LPKDWR 1546
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1561 LPKDWR 1566
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LPADWR 7
LP DWR
Sbjct: 1591 LPKDWR 1596
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 1 RLPADW 6
RLP DW
Sbjct: 43 RLPEDW 48
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RLPADW 6
RLP DW
Sbjct: 43 RLPEDW 48
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RLPADWRP 8
+LP +W+P
Sbjct: 521 KLPGNWKP 528
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 4 ADWRP 8
DWRP
Sbjct: 419 GDWRP 423
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 5 DWRPA 9
+WRPA
Sbjct: 29 EWRPA 33
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 4 ADWRPAE 10
A WRP+E
Sbjct: 37 ATWRPSE 43
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 4 ADWRP 8
DWRP
Sbjct: 434 GDWRP 438
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 LPADWRPA 9
+PADW P
Sbjct: 3295 VPADWVPT 3302
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 LPADWRPA 9
+P DW PA
Sbjct: 3293 VPVDWVPA 3300
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 5 DWRPA 9
+WRPA
Sbjct: 29 EWRPA 33
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 PADWRPAE 10
P +W P E
Sbjct: 47 PVNWGPGE 54
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 PADWRPAE 10
P +W P E
Sbjct: 47 PVNWGPGE 54
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 4 ADWRP 8
DWRP
Sbjct: 444 GDWRP 448
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 2 LPADWRPA 9
PA WRPA
Sbjct: 896 FPAPWRPA 903
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 4 ADWRP 8
DWRP
Sbjct: 433 GDWRP 437
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 4 ADWRP 8
DWRP
Sbjct: 430 GDWRP 434
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 4 ADWRP 8
DWRP
Sbjct: 439 GDWRP 443
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 LPADW 6
LP DW
Sbjct: 361 LPGDW 365
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 2 LPADW 6
LP DW
Sbjct: 361 LPGDW 365
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LPADW 6
LP DW
Sbjct: 361 LPGDW 365
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LPADW 6
LP DW
Sbjct: 361 LPGDW 365
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 LPADW 6
LP DW
Sbjct: 361 LPGDW 365
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 6 WRPAE 10
WRP+E
Sbjct: 30 WRPSE 34
>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 4 ADWRPAE 10
+DW+P E
Sbjct: 106 SDWKPPE 112
>sp|UL20_VZVD|PROTEIN UL20 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LPADWRPA 9
LP W P+
Sbjct: 193 LPVSWGPS 200
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 2 LPADW 6
LP DW
Sbjct: 44 LPTDW 48
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 PADWRPAE 10
P D+ PAE
Sbjct: 1317 PIDYFPAE 1324
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 PADWRPAE 10
P D+ PAE
Sbjct: 1317 PIDYFPAE 1324
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 6 WRPAE 10
WRP+E
Sbjct: 33 WRPSE 37
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 6 WRPAE 10
WRP+E
Sbjct: 30 WRPSE 34
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 4 ADWRP 8
DWRP
Sbjct: 430 GDWRP 434
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 527 LPGKWKP 533
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 531 LPGKWKP 537
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 525 LPGKWKP 531
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 528 LPGKWKP 534
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 520 LPGKWKP 526
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 519 LPGKWKP 525
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 523 LPGKWKP 529
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 LPADWRP 8
+P DW P
Sbjct: 3286 VPVDWVP 3292
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 527 LPGKWKP 533
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 521 LPGKWKP 527
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 521 LPGKWKP 527
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 526 LPGKWKP 532
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 521 LPGKWKP 527
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 521 LPGKWKP 527
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 523 LPGKWKP 529
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 530 LPGKWKP 536
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 526 LPGKWKP 532
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 LPADWRP 8
+P DW P
Sbjct: 3292 VPVDWVP 3298
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LPADWRP 8
+P DW P
Sbjct: 3275 VPVDWVP 3281
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LPADWRP 8
+P DW P
Sbjct: 3275 VPVDWVP 3281
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 6 WRPAE 10
WRP+E
Sbjct: 4 WRPSE 8
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LPADWRP 8
+P DW P
Sbjct: 3274 VPVDWVP 3280
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 6 WRPAE 10
WRP+E
Sbjct: 4 WRPSE 8
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 RLPADWRP 8
R P DW P
Sbjct: 1072 RKPIDWTP 1079
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 RLPADWRP 8
R P DW P
Sbjct: 1071 RKPIDWTP 1078
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 LPADWRP 8
+P DW P
Sbjct: 3315 VPVDWVP 3321
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 527 LPGKWKP 533
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 4 ADWRPAE 10
A WRP+E
Sbjct: 9 AVWRPSE 15
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 526 LPGKWKP 532
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 LPADWRP 8
+P DW P
Sbjct: 3306 VPVDWVP 3312
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 RLPADWRP 8
+L AD+RP
Sbjct: 1574 KLKADFRP 1581
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 526 LPGRWKP 532
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 525 LPGRWKP 531
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 6 WRPAE 10
WRP+E
Sbjct: 2 WRPSE 6
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 538 LPGRWKP 544
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 4 ADWRPAE 10
A+WRP +
Sbjct: 544 AEWRPGQ 550
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 526 LPGRWKP 532
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 526 LPGRWKP 532
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 538 LPGRWKP 544
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 530 LPGRWKP 536
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 526 LPGRWKP 532
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 538 LPGRWKP 544
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 LPADWRP 8
+PA+W P
Sbjct: 3313 VPANWVP 3319
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 526 LPGRWKP 532
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 526 LPGRWKP 532
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 6 WRPAE 10
WRP E
Sbjct: 28 WRPTE 32
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 LPADWRP 8
+P DW P
Sbjct: 3275 VPIDWVP 3281
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 6 WRPAE 10
WRP+E
Sbjct: 2 WRPSE 6
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 6 WRPAE 10
WRP+E
Sbjct: 2 WRPSE 6
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 524 LPGRWKP 530
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 LPADW 6
LP DW
Sbjct: 1368 LPEDW 1372
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 LPADWRPA 9
+P DW P
Sbjct: 3317 VPVDWVPT 3324
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 LPADWRPA 9
+P DW P
Sbjct: 3301 VPVDWVPT 3308
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 LPADWRPA 9
+P DW P
Sbjct: 3315 VPVDWVPT 3322
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 LPADWRPA 9
+P DW P
Sbjct: 3315 VPVDWVPT 3322
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 LPADWRPA 9
+P DW P
Sbjct: 3315 VPVDWVPT 3322
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 LPADWRPA 9
+P DW P
Sbjct: 3305 VPVDWVPT 3312
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 LPADWRPA 9
+P DW P
Sbjct: 3305 VPVDWVPT 3312
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 LPADWRPA 9
+P DW P
Sbjct: 3295 VPVDWVPT 3302
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 LPADWRPA 9
+P DW P
Sbjct: 3295 VPVDWVPT 3302
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 LPADWRPA 9
+P DW P
Sbjct: 3295 VPVDWVPT 3302
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 LPADWRPA 9
+P DW P
Sbjct: 3295 VPVDWVPT 3302
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 LPADWRP 8
+P DW P
Sbjct: 3308 VPIDWVP 3314
>sp|P12I_HTL1C|ACCESSORY protein p12I|Human T-cell leukemia virus 1
Query: 1 RLPADWR 7
R PA WR
Sbjct: 77 RFPARWR 83
>sp|P12I_HTL1A|ACCESSORY protein p12I|Human T-cell leukemia virus 1
Query: 1 RLPADWR 7
R PA WR
Sbjct: 77 RFPARWR 83
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LPADWRP 8
LP W+P
Sbjct: 532 LPRRWKP 538
117|SequenceR|593|581|LLQRLAPDRLPAD
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LLQRLAPD 8
L+QRLAPD
Sbjct: 756 LMQRLAPD 763
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 3 QRLAPDRLP 11
Q+L DR+P
Sbjct: 1035 QKLTTDRIP 1043
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 5 LAPDRLPAD 13
L PD P+D
Sbjct: 213 LNPDNFPSD 221
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 7 PDRLPAD 13
PD LP+D
Sbjct: 972 PDVLPSD 978
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 5 LAPDRLPAD 13
LAP LP D
Sbjct: 154 LAPQCLPVD 162
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 5 LAPDRLPAD 13
LAP LP D
Sbjct: 154 LAPQCLPVD 162
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 LAPDRLPAD 13
L+PD +P D
Sbjct: 633 LSPDFIPND 641
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 LAPDRLPAD 13
L+PD +P D
Sbjct: 633 LSPDFIPND 641
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 5 LAPDRLPAD 13
LAP LP D
Sbjct: 158 LAPQCLPLD 166
>sp|NP03_HHV1F|NUCLEAR phosphoprotein UL3|Human herpesvirus 1 (strain F)
Query: 5 LAPDRLPAD 13
++PD PAD
Sbjct: 43 ISPDTTPAD 51
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 LQRLAPDRLPA 12
L+ L P R P+
Sbjct: 1837 LEALTPSRTPS 1847
>sp|NP03_HHV11|NUCLEAR phosphoprotein UL3|Human herpesvirus 1 (strain 17)
Query: 5 LAPDRLPAD 13
++PD PAD
Sbjct: 43 ISPDTTPAD 51
>sp|LF2_EBVG|PROTEIN LF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LQRLAPDRLPA 12
L R P R+PA
Sbjct: 193 LSRHQPGRVPA 203
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 LQRLAPDRLPA 12
L+ L P R P+
Sbjct: 1829 LEALTPSRAPS 1839
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 LQRLAPDRLPA 12
L+ L P R P+
Sbjct: 1837 LEALTPSRAPS 1847
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 6 APDRLP 11
APDR P
Sbjct: 272 APDRCP 277
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 6 APDRLP 11
APDR P
Sbjct: 310 APDRCP 315
THE END