1|Sequence|1|10|MWTLVSWVAL
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 WTLVSWVAL 10
WTL +WV +
Sbjct: 149 WTLNAWVKV 157
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+LV+W
Sbjct: 2156 IWSLVAW 2162
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+LV+W
Sbjct: 2156 IWSLVAW 2162
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+LV+W
Sbjct: 2155 IWSLVAW 2161
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+LV+W
Sbjct: 2153 IWSLVAW 2159
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+L++W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+L++W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+L++W
Sbjct: 2155 IWSLIAW 2161
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+L++W
Sbjct: 2155 IWSLIAW 2161
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 WTLVSWVAL 10
WTL +WV +
Sbjct: 149 WTLNAWVKV 157
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+L++W
Sbjct: 1989 IWSLIAW 1995
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 WTLVSWVA 9
WT+ W A
Sbjct: 74 WTITDWKA 81
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 MWTLVSWVAL 10
+WTL+S A+
Sbjct: 746 LWTLISISAI 755
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MWTLVSW 7
+W+L++W
Sbjct: 2155 IWSLMAW 2161
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 3 TLVSW 7
TLVSW
Sbjct: 84 TLVSW 88
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 TLVSW 7
TLVSW
Sbjct: 84 TLVSW 88
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 3 TLVSW 7
TLVSW
Sbjct: 84 TLVSW 88
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TLVSW 7
TLVSW
Sbjct: 84 TLVSW 88
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 3 TLVSW 7
TLVSW
Sbjct: 84 TLVSW 88
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 3 TLVSW 7
TLVSW
Sbjct: 84 TLVSW 88
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 4 LVSWV 8
LVSWV
Sbjct: 250 LVSWV 254
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 4 LVSWV 8
LVSWV
Sbjct: 250 LVSWV 254
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 4 LVSWV 8
LVSWV
Sbjct: 251 LVSWV 255
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 3 TLVSW 7
TL+SW
Sbjct: 85 TLISW 89
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 4 LVSWV 8
LVSWV
Sbjct: 251 LVSWV 255
2|Sequence|6|15|SWVALTAGLV
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 1 SWVALTAGL 9
SW+ L AGL
Sbjct: 152 SWLDLDAGL 160
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 1 SWVALTAGL 9
SW+ L AGL
Sbjct: 152 SWLDLDAGL 160
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 WVALTAGLV 10
W+ AGLV
Sbjct: 1300 WLGFIAGLV 1308
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 3 VALTAGLV 10
VALT GL+
Sbjct: 534 VALTCGLI 541
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 WVALTAGLV 10
W+ AGL+
Sbjct: 1217 WLGFIAGLI 1225
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 WVALTAGLV 10
W+ AGL+
Sbjct: 1199 WLGFIAGLI 1207
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 WVALTAGLV 10
W+ T GLV
Sbjct: 2278 WIKATFGLV 2286
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 WVALTAGLV 10
W+ T GLV
Sbjct: 2298 WIKATFGLV 2306
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 WVALTAGLV 10
W+ T GLV
Sbjct: 2328 WIKATFGLV 2336
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 WVALTAGLV 10
W+ T GLV
Sbjct: 2328 WIKATFGLV 2336
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 WVALTAGLV 10
W+ T GLV
Sbjct: 2298 WIKATFGLV 2306
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 WVALTAGLV 10
W+ T GLV
Sbjct: 2278 WIKATFGLV 2286
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 SWVALTAGLV 10
+W+ L GLV
Sbjct: 2492 TWLWLLCGLV 2501
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 2 WVALTAGLV 10
W++ T GL+
Sbjct: 184 WISKTLGLL 192
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WVALTAGL 9
WVALT L
Sbjct: 239 WVALTPTL 246
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WVALTAGL 9
WVALT L
Sbjct: 239 WVALTPTL 246
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WVALTAGL 9
WVALT L
Sbjct: 239 WVALTPTL 246
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WVALTAGL 9
WVALT L
Sbjct: 239 WVALTPTL 246
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WVALTAGL 9
WVALT L
Sbjct: 239 WVALTPTL 246
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WVALTAGL 9
WVALT L
Sbjct: 239 WVALTPTL 246
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 SWVALTAGLV 10
SW + AGL+
Sbjct: 368 SWGLIIAGLL 377
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WVALTAGL 9
WVALT L
Sbjct: 239 WVALTPTL 246
3|Sequence|11|20|TAGLVAGTRC
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 1 TAGLVAGTRC 10
T GLV T C
Sbjct: 266 TRGLVTATEC 275
>sp|NSP3_ROTB2|NON-STRUCTURAL protein 3|Rotavirus X (isolate
Query: 3 GLVAGTRC 10
GL+ TRC
Sbjct: 136 GLLEKTRC 143
>sp|GL_VZVO|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Oka vaccine)
Query: 2 AGLVAGTRC 10
+G+V T+C
Sbjct: 72 SGIVVKTKC 80
>sp|GL_VZVD|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 AGLVAGTRC 10
+G+V T+C
Sbjct: 71 SGIVVKTKC 79
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 VAGTRC 10
VAGT C
Sbjct: 2378 VAGTAC 2383
4|Sequence|16|25|AGTRCPDGQF
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 AGTRCPD 7
A TRCPD
Sbjct: 442 AATRCPD 448
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 AGTRCPD 7
A TRCPD
Sbjct: 442 AATRCPD 448
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 AGTRCPD 7
A TRCPD
Sbjct: 440 AATRCPD 446
>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RCPDGQ 9
RCPDG+
Sbjct: 57 RCPDGE 62
>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RCPDGQ 9
RCPDG+
Sbjct: 57 RCPDGE 62
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 2 GTRCPDGQ 9
TRCPD Q
Sbjct: 436 ATRCPDKQ 443
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 AGTRCPDGQF 10
AG C DG F
Sbjct: 53 AGRSCSDGTF 62
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GTRCPDGQF 10
G RCPD +
Sbjct: 133 GLRCPDNRL 141
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GTRCPDGQF 10
G RCPD +
Sbjct: 133 GLRCPDNRL 141
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 GTRCPD 7
TRCPD
Sbjct: 471 ATRCPD 476
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 GTRCPD 7
TRCPD
Sbjct: 442 ATRCPD 447
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 2 GTRCPD 7
TRCPD
Sbjct: 440 ATRCPD 445
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 2 GTRCPD 7
TRCPD
Sbjct: 441 ATRCPD 446
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 2 GTRCPD 7
TRCPD
Sbjct: 441 ATRCPD 446
>sp|A53_VACCC|TRUNCATED secreted TNF-receptor-like protein A53|Vaccinia virus (strain
Query: 4 RCPDGQF 10
RCP G+F
Sbjct: 53 RCPPGEF 59
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 2 GTRCPD 7
TRCPD
Sbjct: 441 ATRCPD 446
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 2 GTRCPD 7
TRCPD
Sbjct: 450 ATRCPD 455
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 GTRCPDGQ 9
G RC D Q
Sbjct: 1754 GIRCKDNQ 1761
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 2 GTRCPDGQF 10
GTR PD F
Sbjct: 272 GTRVPDPDF 280
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 TRCPDGQ 9
T CPD Q
Sbjct: 423 TNCPDRQ 429
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 TRCPDGQ 9
T CPD Q
Sbjct: 423 TNCPDRQ 429
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 2 GTRCPD 7
GTRCP+
Sbjct: 504 GTRCPE 509
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 AGTRCPDGQF 10
A T CP G F
Sbjct: 1637 ADTCCPIGSF 1646
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 2 GTRCPDG 8
T+CPD
Sbjct: 436 ATKCPDA 442
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 4 RCPDGQF 10
+CP G+F
Sbjct: 437 KCPPGEF 443
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 2 GTRCPDG 8
T+CPD
Sbjct: 436 ATKCPDA 442
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 4 RCPDGQF 10
RC DGQ
Sbjct: 361 RCRDGQL 367
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 4 RCPDGQF 10
RC DGQ
Sbjct: 361 RCRDGQL 367
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 2 GTRCPDG 8
T+CPD
Sbjct: 436 ATKCPDA 442
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 2 GTRCPDG 8
T+CPD
Sbjct: 436 ATKCPDA 442
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 4 RCPDGQ 9
R PDGQ
Sbjct: 116 RAPDGQ 121
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 2 GTRCPDGQF 10
G R P+G F
Sbjct: 20 GLRAPEGYF 28
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 2 GTRCPDGQF 10
G R P+G F
Sbjct: 20 GLRAPEGYF 28
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 4 RCPDGQF 10
+CP G+F
Sbjct: 437 KCPPGEF 443
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 2 GTRCPDGQF 10
G R P+G F
Sbjct: 20 GLRAPEGYF 28
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 AGTRCPD 7
AG R PD
Sbjct: 2846 AGARIPD 2852
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 AGTRCPD 7
AG R PD
Sbjct: 2846 AGARIPD 2852
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 CPDGQ 9
CPD Q
Sbjct: 918 CPDNQ 922
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 2 GTRCPDG 8
T+CPD
Sbjct: 430 ATKCPDN 436
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 5 CPDGQF 10
C DGQF
Sbjct: 354 CGDGQF 359
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 TRCPDGQ 9
T+C DG+
Sbjct: 448 TKCRDGE 454
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 5 CPDGQ 9
CPDG+
Sbjct: 215 CPDGE 219
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 2 GTRCPDG 8
T+CPD
Sbjct: 431 ATKCPDA 437
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 2 GTRCPDG 8
T+CPD
Sbjct: 431 ATKCPDA 437
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 RCPDGQ 9
RCP G+
Sbjct: 429 RCPKGE 434
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 2 GTRCPDG 8
T+CPD
Sbjct: 435 ATKCPDA 441
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 RCPDGQ 9
RCP G+
Sbjct: 429 RCPKGE 434
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 RCPDGQ 9
RCP G+
Sbjct: 428 RCPKGE 433
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 5 CPDGQ 9
CP+GQ
Sbjct: 569 CPEGQ 573
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 RCPDGQ 9
RCP G+
Sbjct: 428 RCPKGE 433
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 RCPDGQ 9
RCP G+
Sbjct: 428 RCPKGE 433
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 RCPDGQ 9
RCP G+
Sbjct: 429 RCPKGE 434
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 TRCPDGQ 9
T CPD Q
Sbjct: 423 TNCPDRQ 429
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 5 CPDGQ 9
CP+GQ
Sbjct: 569 CPEGQ 573
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 4 RCPDGQ 9
RCP G+
Sbjct: 429 RCPKGE 434
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 TRCPDGQ 9
T CPD Q
Sbjct: 423 TNCPDRQ 429
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 1 AGTRCPD 7
AG+RC D
Sbjct: 378 AGSRCSD 384
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 5 CPDGQF 10
C DGQF
Sbjct: 354 CGDGQF 359
5|Sequence|21|30|PDGQFCPVAC
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 PDGQFCPVA 9
PDGQ P+A
Sbjct: 80 PDGQGVPIA 88
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 PDGQFCPVA 9
PDGQ P+A
Sbjct: 80 PDGQGVPIA 88
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 6 CPVAC 10
CP+AC
Sbjct: 471 CPIAC 475
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 DGQFC--PVA 9
DGQFC PVA
Sbjct: 356 DGQFCYSPVA 365
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 1 PDGQFCPVA 9
P+G F P+A
Sbjct: 24 PEGYFTPIA 32
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 1 PDGQFCPVA 9
P+G F P+A
Sbjct: 24 PEGYFTPIA 32
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 1 PDGQFCPVA 9
P+G F P+A
Sbjct: 24 PEGYFTPIA 32
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 DGQFC--PVA 9
DGQFC PVA
Sbjct: 356 DGQFCYSPVA 365
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GQFCPV 8
G FCP+
Sbjct: 662 GAFCPI 667
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GQFCPV 8
G FCP+
Sbjct: 662 GAFCPI 667
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 6 CPVAC 10
CPV C
Sbjct: 378 CPVVC 382
>sp|VU26_HHV6Z|PROTEIN U26|Human herpesvirus 6B (strain Z29)
Query: 2 DGQFCPVAC 10
+G FC V C
Sbjct: 281 NGFFCLVVC 289
>sp|VU26_HHV6H|PROTEIN U26|Human herpesvirus 6B (HHV-6 variant
Query: 2 DGQFCPVAC 10
+G FC V C
Sbjct: 281 NGFFCLVVC 289
>sp|VU26_HHV6U|PROTEIN U26|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DGQFCPVAC 10
+G FC V C
Sbjct: 281 NGFFCLVVC 289
>sp|VU26_HHV6G|PROTEIN U26|Human herpesvirus 6A (strain GS)
Query: 2 DGQFCPVAC 10
+G FC V C
Sbjct: 281 NGFFCLVVC 289
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 PDGQFCPV 8
P+G F P+
Sbjct: 1813 PNGVFAPI 1820
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 PDGQFCPV 8
P+G F P+
Sbjct: 1813 PNGVFAPI 1820
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 1 PDGQFCPVA 9
PD FCP+A
Sbjct: 18 PD--FCPLA 24
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 1 PDGQFCPVA 9
PD FCP+A
Sbjct: 18 PD--FCPLA 24
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 PDGQFCP 7
P G+ CP
Sbjct: 931 PSGEECP 937
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 6 CPVAC 10
CP AC
Sbjct: 471 CPTAC 475
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 6 CPVAC 10
CP AC
Sbjct: 471 CPTAC 475
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 PDGQFC 6
PD FC
Sbjct: 817 PDDNFC 822
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 CPVAC 10
CPV C
Sbjct: 389 CPVEC 393
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 1 PDGQFCPVA 9
P G F P+A
Sbjct: 24 PAGYFTPIA 32
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 1 PDGQFCPVA 9
P G F P+A
Sbjct: 24 PAGYFTPIA 32
>sp|NP03_HHV1F|NUCLEAR phosphoprotein UL3|Human herpesvirus 1 (strain F)
Query: 2 DGQFCP 7
DG+ CP
Sbjct: 201 DGRLCP 206
>sp|NP03_HHV11|NUCLEAR phosphoprotein UL3|Human herpesvirus 1 (strain 17)
Query: 2 DGQFCP 7
DG+ CP
Sbjct: 201 DGRLCP 206
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 DGQFCP 7
DG CP
Sbjct: 115 DGYMCP 120
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 DGQFCP 7
DG CP
Sbjct: 115 DGYMCP 120
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 DGQFCP 7
DG CP
Sbjct: 115 DGYMCP 120
>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)
Query: 2 DGQFCPVA 9
DGQ P+A
Sbjct: 81 DGQGVPIA 88
>sp|NP03_HHV2H|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain HG52)
Query: 2 DGQFCP 7
DG+ CP
Sbjct: 199 DGRLCP 204
>sp|NP03_HHV23|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain 333)
Query: 2 DGQFCP 7
DG+ CP
Sbjct: 199 DGRLCP 204
>sp|K12_HHV8P|PROTEIN K12|Human herpesvirus 8 type P
Query: 1 PDGQFCPVA 9
P GQ PVA
Sbjct: 42 PSGQRGPVA 50
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 6 CPVAC 10
CPV C
Sbjct: 1972 CPVPC 1976
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 6 CPVAC 10
CPV C
Sbjct: 1972 CPVPC 1976
6|Sequence|26|35|CPVACCLDPG
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 CPVACCLDP 9
CP+ C DP
Sbjct: 84 CPMKCTEDP 92
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CPVACCLDP 9
CP+ C DP
Sbjct: 82 CPMKCAEDP 90
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 PVACCLDPG 10
P+AC + PG
Sbjct: 391 PLACSIRPG 399
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 1 CPVACCL 7
C ACCL
Sbjct: 181 CSAACCL 187
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 PVACCLDPG 10
P+ C L PG
Sbjct: 1294 PILCALTPG 1302
>sp|YVDG_VACCC|UNCHARACTERIZED 10.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CCLDPG 10
CC DPG
Sbjct: 27 CCKDPG 32
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CPVACCLDP 9
CP+ C DP
Sbjct: 82 CPMRCAEDP 90
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CPVACCL 7
C ACCL
Sbjct: 181 CSAACCL 187
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CPVACCLDP 9
CP+ C DP
Sbjct: 82 CPMRCAEDP 90
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 CPVACCL 7
C ACCL
Sbjct: 181 CSAACCL 187
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CPVACCLDP 9
CP+ C DP
Sbjct: 82 CPMRCAEDP 90
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CPVACCL 7
C ACCL
Sbjct: 181 CSAACCL 187
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 1 CPVACCL 7
C ACCL
Sbjct: 181 CSAACCL 187
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 CPVACC----LDP 9
CP+AC LDP
Sbjct: 471 CPIACVSGVYLDP 483
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 PVACCLDPG 10
P+ C L PG
Sbjct: 1298 PLLCLLAPG 1306
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 3 VACCLDPG 10
+ CC+ PG
Sbjct: 124 IVCCVPPG 131
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 4 ACCLDP 9
+CC++P
Sbjct: 608 SCCIEP 613
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 ACCLDP 9
+CC++P
Sbjct: 608 SCCIEP 613
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 ACCLDP 9
+CC++P
Sbjct: 608 SCCIEP 613
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 CPVACCLDPG 10
CP + L PG
Sbjct: 689 CPNSVILTPG 698
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 CPVACCLDPG 10
CP + L PG
Sbjct: 689 CPNSVILTPG 698
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 CPVACCLDPG 10
CP + L PG
Sbjct: 689 CPNSVILTPG 698
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 CPVACCLDPG 10
CP + L PG
Sbjct: 689 CPNSVILTPG 698
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 CPVACCLDPG 10
CP + L PG
Sbjct: 687 CPNSVILTPG 696
>sp|UL132_HCMVT|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 ACCLDPG 10
+CC PG
Sbjct: 108 SCCKHPG 114
>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ACCLDPG 10
+CC PG
Sbjct: 108 SCCKHPG 114
>sp|UL132_HCMVA|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ACCLDPG 10
+CC PG
Sbjct: 108 SCCKHPG 114
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 1 CPVACC----LDP 9
CP AC LDP
Sbjct: 471 CPTACVSGVYLDP 483
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 5 CCLDP 9
CC++P
Sbjct: 608 CCIEP 612
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 5 CCLDP 9
CC++P
Sbjct: 608 CCIEP 612
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 5 CCLDP 9
CC++P
Sbjct: 608 CCIEP 612
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 5 CCLDP 9
CC++P
Sbjct: 608 CCIEP 612
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 1 CPVACC----LDP 9
CP AC LDP
Sbjct: 471 CPTACVSGVYLDP 483
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 5 CCLDP 9
CC++P
Sbjct: 608 CCIEP 612
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 3 VACCLDPG 10
VA C PG
Sbjct: 820 VAICFTPG 827
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 3 VACCLDPG 10
VA C PG
Sbjct: 821 VAICFTPG 828
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain AD169)
Query: 3 VACCLDPG 10
V CL+PG
Sbjct: 285 VRACLNPG 292
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VACCLDPG 10
V CL+PG
Sbjct: 287 VRACLNPG 294
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 5 CCLDP 9
CC++P
Sbjct: 608 CCIEP 612
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 5 CCLDP 9
CC++P
Sbjct: 608 CCIEP 612
>sp|US28_HCMVM|ENVELOPE protein US28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CCLDP 9
CCL+P
Sbjct: 284 CCLNP 288
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 CPVACCLDPG 10
CP + L PG
Sbjct: 689 CPNSVILTPG 698
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 2 PVACC 6
PV+CC
Sbjct: 191 PVSCC 195
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 VACCLDP 9
+ CCL P
Sbjct: 5762 IMCCLGP 5768
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 VACCLDP 9
+ CCL P
Sbjct: 5782 IMCCLGP 5788
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 VACCLDP 9
+ CCL P
Sbjct: 5812 IMCCLGP 5818
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 5 CCLDP 9
CC++P
Sbjct: 608 CCIEP 612
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 4 ACCLDPG 10
A CL PG
Sbjct: 1538 AVCLPPG 1544
>sp|US28_HCMVT|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain Towne)
Query: 5 CCLDP 9
CCL+P
Sbjct: 284 CCLNP 288
>sp|US28_HCMVA|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain AD169)
Query: 5 CCLDP 9
CCL+P
Sbjct: 284 CCLNP 288
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 CPVACCLDPG 10
C +A LD G
Sbjct: 254 CKIAVSLDEG 263
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 VACCLDP 9
V C LDP
Sbjct: 289 VDCALDP 295
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 VACCLDPG 10
+ CLDP
Sbjct: 222 IPVCLDPA 229
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 CPVACCLDP 9
CP A C+ P
Sbjct: 2013 CPEAACIRP 2021
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 PVACCL 7
PVA CL
Sbjct: 3626 PVAICL 3631
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 CPVACCLD 8
CPV C D
Sbjct: 509 CPVESCSD 516
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 PVACCL 7
PVA CL
Sbjct: 3626 PVAICL 3631
7|Sequence|31|40|CLDPGGASYS
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 CLDPGG 6
CL+PGG
Sbjct: 1263 CLNPGG 1268
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 CLDPGG 6
CL+PGG
Sbjct: 1263 CLNPGG 1268
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 CLDPGG 6
C+DP G
Sbjct: 986 CVDPAG 991
>sp|A28_MCV1|ENVELOPE protein A28 homolog|Molluscum contagiosum virus subtype 1
Query: 1 CLDPGGA 7
C DP GA
Sbjct: 123 CTDPNGA 129
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 CLDPG 5
CL+PG
Sbjct: 1777 CLEPG 1781
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 CLDPG 5
CL+PG
Sbjct: 1777 CLEPG 1781
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 CLDPG 5
CL+PG
Sbjct: 1777 CLEPG 1781
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 3 DPGGASYS 10
DP G SY+
Sbjct: 312 DPKGRSYN 319
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 LDPGGASY 9
L+PG +SY
Sbjct: 34 LEPGPSSY 41
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 LDPGGASY 9
L+PG +SY
Sbjct: 34 LEPGPSSY 41
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 LDPGGASY 9
L+PG +SY
Sbjct: 34 LEPGPSSY 41
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 CLDPGGA 7
CL P GA
Sbjct: 1830 CLTPQGA 1836
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 LDPGGAS 8
+ PGGAS
Sbjct: 14 IPPGGAS 20
>sp|NS8B_SARS|ORF8B protein|Severe acute respiratory syndrome coronavirus
Query: 1 CLDPGGAS 8
C DP G +
Sbjct: 48 CQDPAGGA 55
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 LDPGGASY 9
L+PG +SY
Sbjct: 34 LEPGPSSY 41
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 LDPGGASY 9
L+PG +SY
Sbjct: 34 LEPGPSSY 41
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 LDPGGASY 9
L+PG +SY
Sbjct: 34 LEPGPSSY 41
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 LDPGGASY 9
L+PG +SY
Sbjct: 34 LEPGPSSY 41
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 LDPGGASY 9
L+PG +SY
Sbjct: 34 LEPGPSSY 41
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 LDPGGASY 9
L+PG +SY
Sbjct: 34 LEPGPSSY 41
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 2 LDPGGASYS 10
L GG SYS
Sbjct: 645 LRDGGQSYS 653
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 LDPGGASY 9
L+PG +SY
Sbjct: 34 LEPGPSSY 41
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 4 PGGAS 8
PGGAS
Sbjct: 1128 PGGAS 1132
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 4 PGGAS 8
PGGAS
Sbjct: 1128 PGGAS 1132
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 4 PGGAS 8
PGGAS
Sbjct: 1128 PGGAS 1132
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 4 PGGAS 8
PGGAS
Sbjct: 1128 PGGAS 1132
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 4 PGGAS 8
PGGAS
Sbjct: 1133 PGGAS 1137
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 4 PGGAS 8
PGGAS
Sbjct: 1133 PGGAS 1137
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 CLDPGGAS 8
C DP G S
Sbjct: 772 CGDPNGPS 779
8|Sequence|36|45|GASYSCCRPL
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 GASYSCCRPL 10
G SY C +PL
Sbjct: 1243 GISYKCVKPL 1252
>sp|CAP6_ADE41|PRE-PROTEIN VI|Human adenovirus F serotype 41
Query: 1 GASYSCCRPL 10
GASY RP+
Sbjct: 176 GASYPMTRPI 185
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 3 SYSCC 7
+YSCC
Sbjct: 58 AYSCC 62
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate
Query: 6 CCRPL 10
CC PL
Sbjct: 53 CCNPL 57
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 6 CCRPL 10
CC PL
Sbjct: 53 CCNPL 57
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 6 CCRPL 10
CC PL
Sbjct: 53 CCNPL 57
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 GASYSCCR 8
G SY+C R
Sbjct: 150 GGSYTCKR 157
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 6 CCRPL 10
CC PL
Sbjct: 53 CCNPL 57
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 CCRPL 10
CC PL
Sbjct: 53 CCNPL 57
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 6 CCRPL 10
CC PL
Sbjct: 53 CCNPL 57
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 GASYSCCR 8
G SY+C R
Sbjct: 150 GGSYACKR 157
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 5 SCCRPL 10
SCCR L
Sbjct: 1789 SCCRYL 1794
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 5 SCCRPL 10
SCCR L
Sbjct: 1789 SCCRYL 1794
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 GASYSCCR 8
G SY+C R
Sbjct: 150 GGSYACKR 157
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 GASYSCCR 8
G SY+C R
Sbjct: 134 GGSYACKR 141
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 GASYSCCR 8
G SY+C R
Sbjct: 150 GGSYACKR 157
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 GASYSCCR 8
G SY+C R
Sbjct: 134 GGSYACKR 141
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 GASYSCC 7
G SYS C
Sbjct: 592 GVSYSLC 598
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 GASYSCC 7
G SYS C
Sbjct: 592 GVSYSLC 598
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GASYSCC 7
G SYS C
Sbjct: 588 GVSYSLC 594
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 ASYSCCRPL 10
A SC RP+
Sbjct: 1298 ACKSCLRPI 1306
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 ASYSCCRPL 10
A SC RP+
Sbjct: 1298 ACKSCLRPI 1306
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 ASYSCCRPL 10
A SC RP+
Sbjct: 1298 ACKSCLRPI 1306
>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GASYSCCR 8
GA+++C R
Sbjct: 96 GATFTCTR 103
>sp|S1_FOAMV|PUTATIVE uncharacterized protein S1|Human spumaretrovirus (SFVcpz(hu))
Query: 5 SCCRPL 10
SCC P+
Sbjct: 32 SCCWPI 37
>sp|VLTF3_MONPV|VIRAL late gene transcription factor|Monkeypox virus (MPXV)
Query: 5 SCCR 8
SCCR
Sbjct: 7 SCCR 10
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 GASYSCCR 8
G SY+C R
Sbjct: 150 GESYACKR 157
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 GASYSC 6
GA++SC
Sbjct: 666 GATFSC 671
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 4 YSCCRPL 10
+ CC P+
Sbjct: 448 FQCCNPV 454
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 4 YSCCRPL 10
+ CC P+
Sbjct: 448 FQCCNPV 454
>sp|A40_VACCC|PROTEIN A40|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 ASYSCC 7
A Y+CC
Sbjct: 9 AGYACC 14
>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain
Query: 1 GASYSCCR 8
GA+++C R
Sbjct: 96 GAAFACTR 103
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 GASYSCC 7
G+S+ CC
Sbjct: 1038 GSSFKCC 1044
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 4 YSCCRPL 10
+ CC P+
Sbjct: 428 FQCCNPV 434
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 GASYSCC 7
G+S+ CC
Sbjct: 1038 GSSFKCC 1044
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 GASYSCC 7
G+S+ CC
Sbjct: 1039 GSSFKCC 1045
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 GASYSCC 7
G+S+ CC
Sbjct: 1038 GSSFKCC 1044
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 4 YSCCRPL 10
+ CC P+
Sbjct: 434 FQCCNPV 440
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 GASYSCC 7
G+S+ CC
Sbjct: 1042 GSSFKCC 1048
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 ASYSCCRPL 10
+ YS C PL
Sbjct: 539 SQYSDCDPL 547
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 ASYSCCRPL 10
+ YS C PL
Sbjct: 539 SQYSDCDPL 547
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 ASYSCCRP 9
+SY C+P
Sbjct: 758 SSYEYCQP 765
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 YSCCRPL 10
+SCC P
Sbjct: 778 FSCCMPF 784
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 ASYSCCRP 9
+SY C+P
Sbjct: 758 SSYEYCQP 765
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 ASYSCCRP 9
+SY C+P
Sbjct: 758 SSYEYCQP 765
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 SCCR 8
SCCR
Sbjct: 6215 SCCR 6218
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 ASYSCCRP 9
+SY C+P
Sbjct: 758 SSYEYCQP 765
9|Sequence|41|50|CCRPLLDKWP
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 1366 CRAVAKKWP 1374
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 1366 CRAVAKKWP 1374
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 1370 CRAVAKKWP 1378
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 1368 CRAVARKWP 1376
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 1365 CRAVARKWP 1373
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 CRPLLDKWP 10
CR + KWP
Sbjct: 34 CRAVARKWP 42
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 CRPLLDKWP 10
CR + +WP
Sbjct: 1381 CRAIYKRWP 1389
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 CRPLLDKWP 10
CR + +WP
Sbjct: 1381 CRAIYKRWP 1389
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CRPLLDK 8
CRPLLD+
Sbjct: 206 CRPLLDE 212
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 2 CRPLLDKWP 10
C PL+ K+P
Sbjct: 340 CLPLMQKFP 348
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CRPLLDK 8
CRPLLD+
Sbjct: 275 CRPLLDE 281
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 2 CRPLLDK 8
CRPLLD+
Sbjct: 337 CRPLLDE 343
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 CCRPLLDKWP 10
CC + WP
Sbjct: 469 CCCAVFADWP 478
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 1 CCRPLLDKWP 10
CC + WP
Sbjct: 469 CCCAVFADWP 478
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 CCRPLLDKWP 10
CC + WP
Sbjct: 471 CCCAVFADWP 480
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 PLLDKW 9
PLLD+W
Sbjct: 2302 PLLDRW 2307
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 PLLDKW 9
PLLD+W
Sbjct: 2302 PLLDRW 2307
Query: 2 CRPLL 6
CRPLL
Sbjct: 2143 CRPLL 2147
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 CRPLLDK 8
C+P LDK
Sbjct: 944 CKPELDK 950
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 2 CRPLLDKWP 10
C PL+ K+P
Sbjct: 510 CLPLMQKFP 518
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 2 CRPLLDKWP 10
C PL+ K+P
Sbjct: 509 CLPLMQKFP 517
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 2 CRPLLDKWP 10
C PL+ K+P
Sbjct: 510 CLPLMQKFP 518
>sp|E1BS_ADE07|E1B protein, small T-antigen|Human adenovirus B serotype 7
Query: 3 RPLLDKWP 10
R +LD WP
Sbjct: 132 RTILDYWP 139
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 CRPLLDK 8
C+P LDK
Sbjct: 944 CKPDLDK 950
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 CRPLLDK 8
C+P LDK
Sbjct: 944 CKPDLDK 950
>sp|Y137_ADE02|UNCHARACTERIZED protein B-137|Human adenovirus C serotype 2
Query: 1 CCRPLLDKWP 10
CC WP
Sbjct: 125 CCASFFGHWP 134
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 2 CRPLLDKWP 10
C P+ K+P
Sbjct: 536 CEPIKHKYP 544
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 2 CRPLLDKWP 10
C P+ K+P
Sbjct: 536 CEPIKHKYP 544
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 CRPLLDKWP 10
C P+ K+P
Sbjct: 536 CEPIKHKYP 544
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 4 PLLDKWP 10
P+++ WP
Sbjct: 276 PMINPWP 282
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 2 CRPLLDKWP 10
C PL+D P
Sbjct: 299 CYPLMDLNP 307
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 CRPLLDKWP 10
C P+ K+P
Sbjct: 535 CEPIKHKYP 543
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 2 CRPLLDKWP 10
C PL+D P
Sbjct: 295 CYPLMDVNP 303
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 RPLLDKW 9
+PLLDK+
Sbjct: 1061 QPLLDKF 1067
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 RPLLDKW 9
+PLLDK+
Sbjct: 1060 QPLLDKF 1066
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 RPLLDKW 9
+PLLDK+
Sbjct: 1060 QPLLDKF 1066
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 2 CRPLLDKWP 10
C PL+D P
Sbjct: 295 CYPLMDLNP 303
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 RPLLDKW 9
R +LD+W
Sbjct: 63 RAVLDRW 69
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 3 RPLLDKWP 10
+PLLD+ P
Sbjct: 361 QPLLDELP 368
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 RPLLDKW 9
R +LD+W
Sbjct: 63 RAVLDRW 69
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 RPLLDKW 9
R +LD+W
Sbjct: 63 RAVLDRW 69
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 RPLLDKW 9
+PL D W
Sbjct: 75 KPLTDYW 81
>sp|RUVV_VARV|RESOLVASE OPG149|Variola virus
Query: 3 RPLLDKW 9
R +LDKW
Sbjct: 162 RYVLDKW 168
>sp|RUVV_VAR67|RESOLVASE OPG149|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 RPLLDKW 9
R +LDKW
Sbjct: 162 RYVLDKW 168
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 CCRPLLD 7
C RPLL+
Sbjct: 83 CWRPLLE 89
>sp|RUVV_MONPV|RESOLVASE OPG149|Monkeypox virus (MPXV)
Query: 3 RPLLDKW 9
R +LDKW
Sbjct: 162 RYVLDKW 168
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 PLLDKW 9
PLL KW
Sbjct: 2302 PLLQKW 2307
>sp|RUVV_VACCA|HOLLIDAY junction resolvase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 RPLLDKW 9
R +LDKW
Sbjct: 162 RYVLDKW 168
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 CCRPLLD 7
CC +LD
Sbjct: 287 CCSKILD 293
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 2 CRPLL 6
CRPLL
Sbjct: 798 CRPLL 802
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 2 CRPLL 6
CRPLL
Sbjct: 798 CRPLL 802
>sp|RUVV_VACCC|RESOLVASE OPG149|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RPLLDKW 9
R +LDKW
Sbjct: 151 RYVLDKW 157
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 2 CRPLL 6
CRPLL
Sbjct: 798 CRPLL 802
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CRPLL 6
CRPLL
Sbjct: 787 CRPLL 791
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 CRPLL 6
CRPLL
Sbjct: 2142 CRPLL 2146
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CCRPLL 6
C RPLL
Sbjct: 794 CSRPLL 799
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 CRPLL 6
CRPLL
Sbjct: 797 CRPLL 801
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CRPLL 6
CRPLL
Sbjct: 2137 CRPLL 2141
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CRPLL 6
CRPLL
Sbjct: 2137 CRPLL 2141
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CRPLL 6
CRPLL
Sbjct: 787 CRPLL 791
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CCRPLL 6
C RPLL
Sbjct: 797 CSRPLL 802
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CCRPLL 6
C RPLL
Sbjct: 798 CSRPLL 803
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 2 CRPLL 6
CRPLL
Sbjct: 797 CRPLL 801
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 2 CRPLL 6
CRPLL
Sbjct: 797 CRPLL 801
10|Sequence|46|55|LDKWPTTLSR
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 DKWPTTLSR 10
D+WPT SR
Sbjct: 1461 DRWPTERSR 1469
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LDKWPTTLSR 10
LD+W LSR
Sbjct: 549 LDRWSRDLSR 558
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LDKWPTTLSR 10
LD+W LSR
Sbjct: 549 LDRWSRDLSR 558
>sp|NEP_INCGL|NUCLEAR export protein|Influenza C virus (strain C/Great
Query: 1 LDKWP 5
LDKWP
Sbjct: 69 LDKWP 73
>sp|NEP_INCTA|NUCLEAR export protein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 LDKWP 5
LDKWP
Sbjct: 69 LDKWP 73
>sp|NEP_INCJH|NUCLEAR export protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 LDKWP 5
LDKWP
Sbjct: 69 LDKWP 73
>sp|NEP_INCHY|NUCLEAR export protein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 LDKWP 5
LDKWP
Sbjct: 74 LDKWP 78
>sp|NEP_INCAA|NUCLEAR export protein|Influenza C virus (strain C/Ann
Query: 1 LDKWP 5
LDKWP
Sbjct: 74 LDKWP 78
>sp|NEP_INCMI|NUCLEAR export protein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 LDKWP 5
LDKWP
Sbjct: 69 LDKWP 73
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 LDKWPTTLSR 10
L+ W T LSR
Sbjct: 254 LEYWVTPLSR 263
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 LDKWPTTLSR 10
L+ W T LSR
Sbjct: 254 LEYWVTPLSR 263
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 1 LDKWPTT 7
LD WP T
Sbjct: 481 LDPWPLT 487
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 1 LDKWPTT 7
LD WP T
Sbjct: 481 LDPWPLT 487
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 1 LDKWPTT 7
LD WP T
Sbjct: 481 LDPWPLT 487
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 1 LDKWPTT 7
LD WP T
Sbjct: 481 LDPWPLT 487
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 LDKWPTT 7
LD WP T
Sbjct: 481 LDPWPLT 487
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DKWPTTLSR 10
+KW TLSR
Sbjct: 337 EKWNMTLSR 345
>sp|PG142_VARV|CORE protein OPG142|Variola virus
Query: 4 WPTTLS 9
WP+TLS
Sbjct: 14 WPSTLS 19
>sp|PG142_VAR67|CORE protein OPG142|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 WPTTLS 9
WP+TLS
Sbjct: 14 WPSTLS 19
>sp|PG142_VACCC|CORE protein OPG142|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 WPTTLS 9
WP+TLS
Sbjct: 14 WPSTLS 19
>sp|PG142_VACCA|CORE protein OPG142|Vaccinia virus (strain Ankara) (VACV)
Query: 4 WPTTLS 9
WP+TLS
Sbjct: 14 WPSTLS 19
>sp|PG142_MONPV|CORE protein OPG142|Monkeypox virus (MPXV)
Query: 4 WPTTLS 9
WP+TLS
Sbjct: 14 WPSTLS 19
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 DKWPTTLSR 10
D+W TLS+
Sbjct: 96 DEWENTLSQ 104
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 DKWPTTLSR 10
D+W TLS+
Sbjct: 96 DEWENTLSQ 104
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 DKWPTTLSR 10
D+W TLS+
Sbjct: 96 DEWENTLSQ 104
>sp|NEP_INCYA|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 LDKWP 5
LD+WP
Sbjct: 69 LDRWP 73
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 DKWPTTLSR 10
D+W TLS+
Sbjct: 96 DEWENTLSQ 104
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 KWPTTLS 9
+WPT+ +
Sbjct: 1387 RWPTSFT 1393
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 LDKWPTTLS 9
LDK TT+S
Sbjct: 577 LDKAKTTIS 585
>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 DKWPTTLSR 10
D+W TLS+
Sbjct: 96 DEWENTLSQ 104
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 DKWPTTLS 9
+K+PTT++
Sbjct: 605 EKFPTTVT 612
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 DKWPTTLS 9
+K+PTT++
Sbjct: 605 EKFPTTVT 612
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 1 LDKWPTTLS 9
LDK TT+S
Sbjct: 576 LDKAKTTIS 584
>sp|RUVV_VARV|RESOLVASE OPG149|Variola virus
Query: 1 LDKWPTTLS 9
LDKW T +
Sbjct: 165 LDKWNTNYT 173
>sp|RUVV_VAR67|RESOLVASE OPG149|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LDKWPTTLS 9
LDKW T +
Sbjct: 165 LDKWNTNYT 173
11|Sequence|51|60|TTLSRHLGGP
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 TTLSRHL 7
TTLSRH+
Sbjct: 213 TTLSRHI 219
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related
Query: 4 SRHLGGP 10
+RHL GP
Sbjct: 80 TRHLPGP 86
Query: 2 TLSRHLGGP 10
++ +H+G P
Sbjct: 3314 SVQKHIGAP 3322
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 4 SRHLGGP 10
+RHL GP
Sbjct: 80 TRHLPGP 86
Query: 2 TLSRHLGGP 10
++ +H+G P
Sbjct: 3314 SVQKHIGAP 3322
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 1 TTLSRH 6
TTL+RH
Sbjct: 295 TTLARH 300
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 5 RHLGGP 10
RH+ GP
Sbjct: 788 RHVNGP 793
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 SRHLGG 9
RHLGG
Sbjct: 2954 ERHLGG 2959
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 3 LSRHLGGP 10
+S HLG P
Sbjct: 158 ISTHLGTP 165
12|Sequence|56|65|HLGGPCQVDA
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 LGGPCQVDA 10
L PCQ D
Sbjct: 648 LNNPCQADG 656
>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HLGGPC 6
HLG PC
Sbjct: 39 HLGYPC 44
>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HLGGPC 6
HLG PC
Sbjct: 39 HLGYPC 44
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 GGPCQVD 9
G PC +D
Sbjct: 528 GNPCSID 534
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 3 GGPCQVD 9
G PC +D
Sbjct: 536 GNPCSID 542
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 3 GGPCQVD 9
G PC +D
Sbjct: 535 GNPCSID 541
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 GPCQVDA 10
GPC+V A
Sbjct: 627 GPCKVPA 633
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 GPCQVDA 10
GPC+V A
Sbjct: 627 GPCKVPA 633
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 PCQVD 9
PCQVD
Sbjct: 973 PCQVD 977
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 PCQVD 9
PCQVD
Sbjct: 978 PCQVD 982
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 3 GGPCQV 8
G PCQV
Sbjct: 28 GAPCQV 33
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 HLGGPC 6
HLGG C
Sbjct: 2956 HLGGRC 2961
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 5 PCQVD 9
PCQ+D
Sbjct: 978 PCQID 982
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 PCQVD 9
PCQ+D
Sbjct: 978 PCQID 982
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 5 PCQVD 9
PCQ+D
Sbjct: 978 PCQID 982
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 2 LGGPCQVDA 10
+G P Q DA
Sbjct: 241 VGSPTQTDA 249
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LGGPCQVDA 10
+G P Q DA
Sbjct: 242 VGSPTQTDA 250
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 5 PCQVD 9
PCQVD
Sbjct: 163 PCQVD 167
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GGPCQV 8
G PC+V
Sbjct: 609 GAPCKV 614
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GGPCQV 8
G PC+V
Sbjct: 609 GAPCKV 614
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GGPCQV 8
G PC+V
Sbjct: 609 GAPCKV 614
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GGPCQV 8
G PC+V
Sbjct: 609 GAPCKV 614
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GGPCQV 8
G PC+V
Sbjct: 609 GAPCKV 614
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 HLGGPCQ 7
H GGP Q
Sbjct: 1166 HPGGPSQ 1172
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 HLGGPCQ 7
H GGP Q
Sbjct: 1166 HPGGPSQ 1172
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 HLGGPCQ 7
H GGP Q
Sbjct: 1166 HPGGPSQ 1172
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 GPCQV 8
GPC+V
Sbjct: 624 GPCKV 628
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 GPCQV 8
GPC+V
Sbjct: 620 GPCKV 624
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 5 PCQVD 9
PCQV+
Sbjct: 1916 PCQVE 1920
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 5 PCQVD 9
PCQV+
Sbjct: 1916 PCQVE 1920
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 5 PCQVD 9
PCQ+D
Sbjct: 66 PCQID 70
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 GPCQV 8
GPC+V
Sbjct: 621 GPCRV 625
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 GPCQV 8
GPC+V
Sbjct: 622 GPCRV 626
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 GPCQV 8
GPC+V
Sbjct: 620 GPCRV 624
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HLGGPCQVDA 10
+LG PC +A
Sbjct: 39 NLGYPCYFNA 48
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HLGGPCQVDA 10
+LG PC +A
Sbjct: 39 NLGYPCYFNA 48
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HLGGPCQVDA 10
+LG PC +A
Sbjct: 39 NLGYPCYFNA 48
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 HLGGPCQ 7
HL G C+
Sbjct: 2962 HLAGRCE 2968
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 HLGGPCQ 7
HL G C+
Sbjct: 2966 HLAGRCE 2972
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 5 PCQVD 9
PC+VD
Sbjct: 974 PCKVD 978
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 5 PCQVD 9
PC+VD
Sbjct: 972 PCKVD 976
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 5 PCQVD 9
PC+VD
Sbjct: 972 PCKVD 976
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 5 PCQVD 9
PC+VD
Sbjct: 971 PCKVD 975
13|Sequence|61|70|CQVDAHCSAG
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 CQVDAHCS 8
CQ +HC+
Sbjct: 1147 CQTKSHCT 1154
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 CQVDAHCSA 9
CQV+ +C A
Sbjct: 199 CQVEPNCRA 207
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CQVDAHCS 8
CQ D H S
Sbjct: 283 CQTDLHTS 290
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 3 VDAHCS 8
VD HCS
Sbjct: 178 VDPHCS 183
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 VDAHCSAG 10
+D H SAG
Sbjct: 1841 IDLHTSAG 1848
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 VDAHCSAG 10
+D H SAG
Sbjct: 1841 IDLHTSAG 1848
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 VDAHCSAG 10
+D H SAG
Sbjct: 1841 IDLHTSAG 1848
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 VDAHCSAG 10
+D H SAG
Sbjct: 1841 IDLHTSAG 1848
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 VDAHCSAG 10
+D H SAG
Sbjct: 1841 IDLHTSAG 1848
>sp|DUSP_VACCC|DUAL specificity protein phosphatase OPG106|Vaccinia virus (strain
Query: 6 HCSAG 10
HC+AG
Sbjct: 109 HCAAG 113
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 6 HCSAG 10
HCS+G
Sbjct: 1189 HCSSG 1193
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 6 HCSAG 10
HCS+G
Sbjct: 1189 HCSSG 1193
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 6 HCSAG 10
HCS+G
Sbjct: 1189 HCSSG 1193
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 QVDAHC 7
QVDA+C
Sbjct: 281 QVDANC 286
14|Sequence|66|75|HCSAGHSCIF
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 CSAGHSC 8
C AGHSC
Sbjct: 355 CGAGHSC 361
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 CSAGHSC 8
C AGHSC
Sbjct: 355 CGAGHSC 361
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 2 CSAGHSC 8
CS GH C
Sbjct: 814 CSNGHMC 820
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 HCSAGHSCI 9
H A H+C+
Sbjct: 1857 HAEAAHACL 1865
>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain
Query: 4 AGHSCIF 10
+GH+C F
Sbjct: 275 SGHACAF 281
>sp|M21_HRSVA|PROTEIN M2-1|Human respiratory syncytial virus A
Query: 1 HCSAGHSCIF 10
HC G C F
Sbjct: 14 HCLNGKRCHF 23
>sp|M21_HRSV|PROTEIN M2-1|Human respiratory syncytial virus
Query: 1 HCSAGHSCIF 10
HC G C F
Sbjct: 14 HCLNGKRCHF 23
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 HCSAGHS 7
HC AG+S
Sbjct: 194 HCPAGNS 200
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 CSAGHSCIF 10
CS G C F
Sbjct: 1230 CSCGSCCKF 1238
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 CSAGHS 7
C AGH+
Sbjct: 135 CQAGHN 140
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 2 CSAGHSCI 9
CSA C+
Sbjct: 228 CSASEECV 235
>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)
Query: 2 CSAGHSC 8
CS H C
Sbjct: 165 CSPDHGC 171
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HCSAGHSCIF 10
H S+GH+ F
Sbjct: 294 HSSSGHAVEF 303
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HCSAGHSCIF 10
H S+GH+ F
Sbjct: 294 HSSSGHAVEF 303
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 HCSAGHSCIF 10
H S+GH+ F
Sbjct: 284 HSSSGHAVEF 293
>sp|VE8E2_HPV13|PROTEIN E8^E2C|Human papillomavirus 13
Query: 2 CSAGHSCI 9
CSA C+
Sbjct: 38 CSASEECV 45
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HCSAGHSCIF 10
H S+GH+ F
Sbjct: 294 HSSSGHAVEF 303
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 CSAGHSC 8
C A HSC
Sbjct: 6187 CLAIHSC 6193
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 1 HCSAGH 6
HC GH
Sbjct: 241 HCLYGH 246
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CSAGHS 7
CS GH+
Sbjct: 1175 CSRGHA 1180
15|Sequence|71|80|HSCIFTVSGT
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 3 CIFTVSG 9
C+F++SG
Sbjct: 440 CVFSISG 446
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 SCIFTVSG 9
+C+F++SG
Sbjct: 438 TCVFSLSG 445
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 3 CIFTVSG 9
CI TVSG
Sbjct: 353 CIDTVSG 359
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CIFTVSG 9
CI TVSG
Sbjct: 353 CIDTVSG 359
16|Sequence|76|85|TVSGTSSCCP
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 VSGTSSCCP 10
+SG SS CP
Sbjct: 85 LSGNSSLCP 93
>sp|VP3_SVSAP|UNCHARACTERIZED protein VP3|Sapporo virus (isolate
Query: 3 SGTSSCC 9
SGT +CC
Sbjct: 140 SGTQACC 146
>sp|VP3_SVM93|UNCHARACTERIZED protein VP3|Sapporo virus (strain Human/United
Query: 3 SGTSSCC 9
SGT +CC
Sbjct: 140 SGTQACC 146
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 TVSGTSS 7
TVSGT S
Sbjct: 494 TVSGTKS 500
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 VSGTSSCCP 10
+ GTS CP
Sbjct: 144 IVGTSGSCP 152
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 2 VSGTSSCCP 10
+ GTS CP
Sbjct: 144 IVGTSGSCP 152
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 2 VSGTSSCCP 10
+ GTS CP
Sbjct: 144 IVGTSGSCP 152
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 TVSGTS 6
T+SGTS
Sbjct: 418 TISGTS 423
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TVSGTS 6
T+SGTS
Sbjct: 418 TISGTS 423
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 2 VSGTSSCCP 10
+ GTS CP
Sbjct: 151 IIGTSGSCP 159
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 2 VSGTSSCCP 10
+ GTS CP
Sbjct: 151 IIGTSGSCP 159
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 2 VSGTSSCCP 10
+ GTS CP
Sbjct: 151 IIGTSGSCP 159
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 2 VSGTSSCCP 10
+ GTS CP
Sbjct: 148 IVGTSGSCP 156
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 2 VSGTSSCCP 10
+ GTS CP
Sbjct: 147 IVGTSGSCP 155
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 2 VSGTSSCCP 10
+ GTS CP
Sbjct: 144 IIGTSGSCP 152
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 2 VSGTSSCCP 10
VSG C P
Sbjct: 303 VSGLDDCLP 311
17|Sequence|81|90|SSCCPFPEAV
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P+A
Sbjct: 133 SCCNYPQA 140
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P+A
Sbjct: 133 SCCNYPQA 140
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P+A
Sbjct: 133 SCCNYPQA 140
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P+A
Sbjct: 133 SCCNYPQA 140
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P+A
Sbjct: 133 SCCNYPQA 140
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P+A
Sbjct: 133 SCCNYPQA 140
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P A
Sbjct: 133 SCCKYPRA 140
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P A
Sbjct: 133 SCCKYPRA 140
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 SSCCPFPE 8
++CC PE
Sbjct: 1207 AACCSLPE 1214
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 4 CPFPE 8
CPFP+
Sbjct: 178 CPFPD 182
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 4 CPFPE 8
CPFP+
Sbjct: 178 CPFPD 182
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 4 CPFPE 8
CPFP+
Sbjct: 178 CPFPD 182
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 4 CPFPE 8
CPFP+
Sbjct: 178 CPFPD 182
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 SSCCPFPE 8
++CC PE
Sbjct: 1207 AACCSLPE 1214
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 SSCCPF 6
+ CCPF
Sbjct: 1366 AKCCPF 1371
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 SSCCPF 6
+ CCPF
Sbjct: 1366 AKCCPF 1371
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 SSCCPF 6
+ CCPF
Sbjct: 1362 AKCCPF 1367
>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 SCCPFPEA 9
SCC +P A
Sbjct: 133 SCCNYPRA 140
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 SSCCPF 6
+ CCPF
Sbjct: 1359 ARCCPF 1364
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 4 CPFPEA 9
CP PEA
Sbjct: 770 CPEPEA 775
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 4 CPFPEA 9
CP PEA
Sbjct: 770 CPEPEA 775
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 4 CPFPEA 9
CP PEA
Sbjct: 770 CPEPEA 775
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 CCPF 6
CCPF
Sbjct: 696 CCPF 699
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 4 CPFPEA 9
CP PEA
Sbjct: 770 CPEPEA 775
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 3 CCPFPEAV 10
CC P+AV
Sbjct: 111 CCTGPDAV 118
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SSCCPFPEAV 10
+S C PEAV
Sbjct: 271 ASSCLSPEAV 280
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SSCCPFPEAV 10
+S C PEAV
Sbjct: 271 ASSCLSPEAV 280
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 5 PFPEAV 10
PFPE V
Sbjct: 580 PFPEGV 585
Query: 1 SSCCPFPEAV 10
S CC EA+
Sbjct: 518 SLCCSLREAI 527
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CCPFP 7
CCP P
Sbjct: 64 CCPEP 68
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CCPFP 7
CCP P
Sbjct: 64 CCPEP 68
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 SCCPFPE 8
SCC F E
Sbjct: 1234 SCCKFDE 1240
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 1 SSCCPFPEAV 10
S C FP AV
Sbjct: 76 SLCIYFPNAV 85
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 1 SSCCPF 6
S+CC F
Sbjct: 344 SNCCNF 349
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SSCCPFPE 8
++CC F E
Sbjct: 4443 TNCCRFQE 4450
>sp|GL_VZVO|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Oka vaccine)
Query: 4 CPFPEAV 10
CP PE +
Sbjct: 80 CPVPEVI 86
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SSCCPFPE 8
++CC F E
Sbjct: 4420 TNCCRFQE 4427
>sp|GL_VZVD|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 CPFPEAV 10
CP PE +
Sbjct: 79 CPVPEVI 85
>sp|ST_POVWU|SMALL t antigen|WU polyomavirus (WUPyV)
Query: 3 CCPFP 7
CC FP
Sbjct: 91 CCNFP 95
18|Sequence|86|95|FPEAVACGDG
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 FPEAVACGDG 10
FP V+C DG
Sbjct: 366 FPSVVSCRDG 375
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 FPEAVAC 7
FPE VAC
Sbjct: 277 FPEIVAC 283
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 FPEAVACGDG 10
+ + +ACGDG
Sbjct: 1663 YHDFLACGDG 1672
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 FPEAVACGDG 10
+ + +ACGDG
Sbjct: 1663 YHDFLACGDG 1672
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 AVACGDG 10
AV CGDG
Sbjct: 829 AVRCGDG 835
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 AVACGDG 10
AV CGDG
Sbjct: 829 AVRCGDG 835
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 AVACGDG 10
AV CGDG
Sbjct: 829 AVRCGDG 835
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 5 VACGDG 10
VACG+G
Sbjct: 149 VACGNG 154
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 VACGDG 10
VACG+G
Sbjct: 149 VACGNG 154
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PEAVACGDG 10
P A+ C DG
Sbjct: 28 PSALQCCDG 36
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 FPEAVACGDG 10
+ + ++CGDG
Sbjct: 1663 YRDFLSCGDG 1672
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 FPEAVACGDG 10
+ + ++CGDG
Sbjct: 1663 YRDFLSCGDG 1672
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 FPEAVACGDG 10
+ + ++CGDG
Sbjct: 1663 YRDFLSCGDG 1672
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 FPEAVACGDG 10
+ + ++CGDG
Sbjct: 1663 YRDFLSCGDG 1672
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 FPEAVACGDG 10
+ + ++CGDG
Sbjct: 1663 YRDFLSCGDG 1672
>sp|NS7A_SARS|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 4 AVACGDG 10
A AC DG
Sbjct: 64 AFACADG 70
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FPEAVACGDG 10
PEA A G+G
Sbjct: 473 LPEAGAKGEG 482
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 PEAVACG 8
P A ACG
Sbjct: 71 PSAEACG 77
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 FPEAVACGD 9
+P+AV GD
Sbjct: 1018 WPKAVCTGD 1026
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 PEAVACG 8
P A ACG
Sbjct: 71 PSAEACG 77
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 PEAVACG 8
P A ACG
Sbjct: 71 PSAEACG 77
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 PEAVACG 8
P A ACG
Sbjct: 71 PSAEACG 77
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 PEAVACG 8
P A ACG
Sbjct: 71 PSAEACG 77
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 PEAVACG 8
P A ACG
Sbjct: 71 PSAEACG 77
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 PEAVAC 7
PE VAC
Sbjct: 278 PEIVAC 283
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 1 FPEAVACGDG 10
+P AVA DG
Sbjct: 162 YPAAVAHDDG 171
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 VACGDG 10
V CG+G
Sbjct: 301 VVCGEG 306
19|Sequence|91|100|ACGDGHHCCP
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 GHHCC 9
GH+CC
Sbjct: 436 GHYCC 440
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 5 GHHCC 9
GH+CC
Sbjct: 447 GHYCC 451
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 347 CGEGHSC 353
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 346 CGEGHSC 352
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 346 CGEGHSC 352
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 347 CGEGHSC 353
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 346 CGEGHSC 352
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 347 CGEGHSC 353
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 CGDGHHC 8
CG+GH C
Sbjct: 347 CGEGHSC 353
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 ACGDGH 6
ACGD H
Sbjct: 519 ACGDAH 524
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 ACGDGH 6
ACGD H
Sbjct: 519 ACGDAH 524
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 ACGDG 5
ACGDG
Sbjct: 1668 ACGDG 1672
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 ACGDG 5
ACGDG
Sbjct: 1668 ACGDG 1672
>sp|UL64_HCMVA|UNCHARACTERIZED protein UL64|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GHHC 8
GHHC
Sbjct: 81 GHHC 84
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 CGDGHHC 8
CGDG C
Sbjct: 354 CGDGQFC 360
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 CGDGHHC 8
CGDG C
Sbjct: 354 CGDGQFC 360
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 5 GHHCC 9
GH CC
Sbjct: 161 GHECC 165
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 CGDGHHC 8
CGDG+ C
Sbjct: 356 CGDGYFC 362
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 CGDGHHC 8
CGDG+ C
Sbjct: 356 CGDGYFC 362
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 5 GHHCC 9
GH CC
Sbjct: 161 GHECC 165
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 CGDGHH 7
CG G+H
Sbjct: 1043 CGKGYH 1048
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CGDGHH 7
CG+G+H
Sbjct: 1127 CGNGNH 1132
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 CGDGHH 7
CG G+H
Sbjct: 1025 CGKGYH 1030
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 2 CGDGHHC 8
CGDG+ C
Sbjct: 22 CGDGYFC 28
>sp|PG140_VARV|VIRION membrane protein OPG140|Variola virus
Query: 5 GHHCCP 10
G HC P
Sbjct: 68 GKHCAP 73
>sp|PG140_VAR67|VIRION membrane protein OPG140|Variola virus (isolate
Query: 5 GHHCCP 10
G HC P
Sbjct: 68 GKHCAP 73
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 CGDGHH 7
CG+G+H
Sbjct: 1124 CGNGNH 1129
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 CGDGHH 7
CG+G+H
Sbjct: 1124 CGNGNH 1129
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 3 GDGHH 7
G+GHH
Sbjct: 186 GNGHH 190
>sp|PG140_VACCC|VIRION membrane protein OPG140|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 GHHCCP 10
G HC P
Sbjct: 68 GKHCAP 73
>sp|PG140_MONPV|VIRION membrane protein OPG140|Monkeypox virus (MPXV)
Query: 5 GHHCCP 10
G HC P
Sbjct: 68 GKHCAP 73
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 CGDGHH 7
CG+G+H
Sbjct: 1128 CGNGNH 1133
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GDGHHCCP 10
GD + CP
Sbjct: 709 GDAYFSCP 716
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GDGHHCCP 10
GD + CP
Sbjct: 709 GDAYFSCP 716
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GDGHHCCP 10
GD + CP
Sbjct: 700 GDAYFSCP 707
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GDGHHCCP 10
GD + CP
Sbjct: 698 GDAYFSCP 705
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 CGDGHHC 8
CG GH C
Sbjct: 346 CGMGHSC 352
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 CGDGHH 7
CG+G H
Sbjct: 928 CGNGTH 933
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 ACGDG 5
+CGDG
Sbjct: 1668 SCGDG 1672
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 ACGDG 5
+CGDG
Sbjct: 1668 SCGDG 1672
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 ACGDG 5
+CGDG
Sbjct: 1668 SCGDG 1672
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 ACGDG 5
+CGDG
Sbjct: 1668 SCGDG 1672
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 ACGDG 5
+CGDG
Sbjct: 1668 SCGDG 1672
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 2 CGDGHH 7
CG+G H
Sbjct: 1109 CGNGTH 1114
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ACGDGHH 7
A GDG+H
Sbjct: 141 ASGDGYH 147
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 ACGDGHH 7
A GDG+H
Sbjct: 141 ASGDGYH 147
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ACGDGHH 7
A GDG+H
Sbjct: 141 ASGDGYH 147
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 4 DGHHCC 9
DG+ CC
Sbjct: 527 DGNPCC 532
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 DGHHCC 9
DG CC
Sbjct: 2044 DGASCC 2049
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 DGHHCC 9
DG CC
Sbjct: 2019 DGASCC 2024
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 DGHHCC 9
DG CC
Sbjct: 2030 DGASCC 2035
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 DGHHCC 9
DG CC
Sbjct: 2039 DGASCC 2044
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 4 DGHHCC 9
DG+ CC
Sbjct: 531 DGNPCC 536
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 DGHHCC 9
DG CC
Sbjct: 2016 DGASCC 2021
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 DGHHCC 9
DG CC
Sbjct: 2038 DGASCC 2043
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 DGHHCC 9
DG CC
Sbjct: 2038 DGASCC 2043
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 5 GHHCCP 10
G HC P
Sbjct: 300 GRHCKP 305
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 3 GDGHHCC 9
G+G CC
Sbjct: 9 GEGMGCC 15
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CGDGH 6
C DGH
Sbjct: 6785 CKDGH 6789
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ACGDGHHCCP 10
AC G CP
Sbjct: 1028 ACPRGGFICP 1037
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 5 GHHCCP 10
G H CP
Sbjct: 661 GGHVCP 666
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CGDGH 6
C DGH
Sbjct: 6762 CKDGH 6766
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GDGHH 7
GDG+H
Sbjct: 552 GDGNH 556
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GDGHH 7
GDG+H
Sbjct: 552 GDGNH 556
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GDGHH 7
GDG+H
Sbjct: 552 GDGNH 556
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GDGHH 7
GDG+H
Sbjct: 552 GDGNH 556
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 GDGHH 7
GDG+H
Sbjct: 552 GDGNH 556
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 CGDG 5
CGDG
Sbjct: 543 CGDG 546
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 CGDGHHC 8
CG GH C
Sbjct: 355 CGAGHSC 361
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 CGDG 5
CGDG
Sbjct: 543 CGDG 546
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 CGDG 5
CGDG
Sbjct: 543 CGDG 546
20|Sequence|96|105|HHCCPRGFHC
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 217 HYCAPAGF 224
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 228 HYCAPAGF 235
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 218 HYCAPAGF 225
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 217 HYCAPAGF 224
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 212 HYCAPAGF 219
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 213 HYCAPAGF 220
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 219 HYCAPAGF 226
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 212 HYCAPAGF 219
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 217 HYCAPAGF 224
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 210 HYCAPAGF 217
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 214 HYCAPAGF 221
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 221 HYCAPAGF 228
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 214 HYCAPAGF 221
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 221 HYCAPAGF 228
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 217 HYCAPAGF 224
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 214 HYCAPAGF 221
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 228 HYCAPAGF 235
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 217 HYCAPAGF 224
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 221 HYCAPAGF 228
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 216 HYCAPAGF 223
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 214 HYCAPAGF 221
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 224 HYCAPAGF 231
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 218 HYCAPAGF 225
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 209 HYCAPAGF 216
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 227 HYCTPTGF 234
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 218 HYCVPAGF 225
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 229 HYCTPAGF 236
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 221 HYCTPAGF 228
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 223 HYCTPAGF 230
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 219 HYCTPAGF 226
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 209 HYCAPPGF 216
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 208 HYCAPPGF 215
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 211 HYCAPAGF 218
>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CPRGF 8
CPRGF
Sbjct: 255 CPRGF 259
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CPRGF 8
CPRGF
Sbjct: 257 CPRGF 261
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 216 HYCAPTGY 223
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H C P GF
Sbjct: 211 HFCAPAGF 218
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P GF
Sbjct: 213 HYCAPAGF 220
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 207 HYCAPAGY 214
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 216 HYCAPAGY 223
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 213 HYCAPAGY 220
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 212 HYCAPAGY 219
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 218 HYCAPAGY 225
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HHCCPRGF 8
H+C P G+
Sbjct: 214 HYCAPAGY 221
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 HHCCPRGFH 9
HH PRG H
Sbjct: 1559 HHRRPRGRH 1567
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HHCCPRGFHC 10
HH PRG C
Sbjct: 153 HHTFPRGALC 162
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 CPRGFHC 10
CP HC
Sbjct: 520 CPNKVHC 526
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 CCPRGFHC 10
CCP HC
Sbjct: 918 CCPYCRHC 925
>sp|E3145_ADE06|EARLY E3B 14 kDa protein|Human adenovirus C serotype 6
Query: 2 HCCPRGFHC 10
H C RG C
Sbjct: 42 HQCKRGIFC 50
>sp|E3145_ADE02|EARLY 3 14.7 kDa protein|Human adenovirus C serotype 2
Query: 2 HCCPRGFHC 10
H C RG C
Sbjct: 42 HQCKRGIFC 50
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 HHCCPR 6
H CC R
Sbjct: 162 HECCAR 167
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 HHCCPR 6
H CC R
Sbjct: 162 HECCAR 167
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 4 CPRGFHC 10
CP F+C
Sbjct: 69 CPNCFNC 75
>sp|E4OR1_ADE09|E4-ORF1 adenovirus D serotype 9
Query: 4 CPRGFH 9
CP FH
Sbjct: 30 CPESFH 35
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 HCCPRGFHC 10
H PR F+C
Sbjct: 324 HGDPRTFYC 332
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 4 CPRGFHC 10
CP F+C
Sbjct: 62 CPNCFNC 68
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 HHCCPRGFH 9
HH +G+H
Sbjct: 1039 HHNTRKGYH 1047
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka
Query: 1 HHCCPRGFHC 10
+ CC HC
Sbjct: 59 YRCCGELIHC 68
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 HHCCPRGFHC 10
+ CC HC
Sbjct: 59 YRCCGELIHC 68
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 HCCPR 6
HC PR
Sbjct: 188 HCSPR 192
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CPRGFH 9
CP G H
Sbjct: 1135 CPDGIH 1140
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CPRGFH 9
CP G H
Sbjct: 1135 CPDGIH 1140
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CPRGFH 9
CP G H
Sbjct: 1135 CPDGIH 1140
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CPRGFH 9
CP G H
Sbjct: 1135 CPDGIH 1140
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CPRGFH 9
CP G H
Sbjct: 1135 CPDGIH 1140
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 HCCPR 6
HC PR
Sbjct: 75 HCVPR 79
>sp|E3145_ADE05|EARLY E3 14.5 kDa protein|Human adenovirus C serotype 5
Query: 2 HCCPRGFHC 10
H C RG C
Sbjct: 42 HQCKRGIFC 50
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 CPRGFH 9
CP G+H
Sbjct: 204 CPAGWH 209
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 2 HCCPR 6
HC PR
Sbjct: 75 HCVPR 79
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 HCCPRGF 8
+C P GF
Sbjct: 225 YCAPPGF 231
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 3 CCPRG 7
CC RG
Sbjct: 265 CCTRG 269
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 HCCPRGF 8
+C P GF
Sbjct: 226 YCAPPGF 232
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 CCPRGF 8
CC GF
Sbjct: 261 CCNEGF 266
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 3 CCPRG 7
CC RG
Sbjct: 274 CCTRG 278
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 3 CCPRG 7
CC RG
Sbjct: 274 CCTRG 278
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPRG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPRG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPRG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPRG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPRG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPRG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPRG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 HCCPRGF 8
+C P GF
Sbjct: 216 YCAPPGF 222
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 HCCPRGF 8
+C P GF
Sbjct: 220 YCAPPGF 226
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 1 HHCCPRG 7
HH P G
Sbjct: 17 HHAVPNG 23
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 HCCPRGF 8
+C P GF
Sbjct: 217 YCAPPGF 223
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 1 HHCCPRG 7
HH P G
Sbjct: 17 HHAVPNG 23
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 HCCPRGF 8
+C P GF
Sbjct: 226 YCAPPGF 232
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 HHCCPRG 7
HH P G
Sbjct: 17 HHAVPNG 23
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 2 HCCPRGF 8
HC +GF
Sbjct: 836 HCQSKGF 842
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 HCCPRGF 8
+C P GF
Sbjct: 225 YCAPPGF 231
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 HHCCPRG 7
HH P G
Sbjct: 17 HHAVPNG 23
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 HHCCP 5
+ CCP
Sbjct: 694 YRCCP 698
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 HHCCPRG 7
HH P G
Sbjct: 34 HHAVPNG 40
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 HHCCPRG 7
HH P G
Sbjct: 17 HHAVPNG 23
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 HCCPRGF 8
+C P GF
Sbjct: 215 YCAPPGF 221
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 HHCCPRG 7
HH P G
Sbjct: 17 HHAVPNG 23
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 HHCCPRG 7
HH P G
Sbjct: 17 HHAVPNG 23
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 HCCPRGF 8
+C P GF
Sbjct: 220 YCAPPGF 226
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 HHCCPRGFH 9
HH P G H
Sbjct: 1559 HHRRPHGRH 1567
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 1 HHCCPRGFH 9
++ PRG H
Sbjct: 214 NYLSPRGIH 222
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 HHCCPRG 7
HH P G
Sbjct: 33 HHAVPNG 39
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 1 HHCCPRGF 8
H+C GF
Sbjct: 472 HYCTLNGF 479
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 CCPRGFH 9
C P+ FH
Sbjct: 419 CTPQDFH 425
21|Sequence|101|110|RGFHCSADGR
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 1 RGFHCSA 7
R FHC+A
Sbjct: 591 RTFHCTA 597
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 RGFHCSA 7
R F CSA
Sbjct: 593 RAFQCSA 599
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 RGFHCSA 7
R F CSA
Sbjct: 593 RAFQCSA 599
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 RGFHCSA 7
R F CSA
Sbjct: 591 RAFQCSA 597
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 RGFHCSA 7
R F CSA
Sbjct: 590 RAFQCSA 596
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 RGFHCSA 7
R F CSA
Sbjct: 593 RAFQCSA 599
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 RGFHCSA 7
R F CSA
Sbjct: 591 RAFQCSA 597
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 RGFHCSA 7
R F CSA
Sbjct: 590 RSFQCSA 596
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 RGFHCSA 7
R F CSA
Sbjct: 592 RAFQCSA 598
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 HCSAD 8
HCS+D
Sbjct: 233 HCSSD 237
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 CSADGR 10
CS DGR
Sbjct: 1261 CSRDGR 1266
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 CSADGR 10
CS DGR
Sbjct: 1261 CSRDGR 1266
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 CSADGR 10
CS DGR
Sbjct: 1261 CSRDGR 1266
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 FHCSAD 8
FH SAD
Sbjct: 1005 FHASAD 1010
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 FHCSAD 8
FH SAD
Sbjct: 1005 FHASAD 1010
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 FHCSAD 8
FH SAD
Sbjct: 1006 FHASAD 1011
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 FHCSAD 8
FH SAD
Sbjct: 1006 FHASAD 1011
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 FHCSAD 8
FH SAD
Sbjct: 1005 FHASAD 1010
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 FHCSAD 8
FH SAD
Sbjct: 1005 FHASAD 1010
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 RGFHCSAD 8
+G+ CS D
Sbjct: 4377 KGYGCSCD 4384
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 RGFHCSAD 8
+G+ CS D
Sbjct: 4354 KGYGCSCD 4361
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 RGFHCSAD 8
+G+ CS D
Sbjct: 4377 KGYGCSCD 4384
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 RGFHCSAD 8
+G+ CS D
Sbjct: 4354 KGYGCSCD 4361
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 2 GFHCSA 7
FHC+A
Sbjct: 354 AFHCTA 359
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 GFHCSADG 9
GF ADG
Sbjct: 703 GFQSGADG 710
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 GFHCSADG 9
GF ADG
Sbjct: 700 GFQSGADG 707
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 3 FHCS 6
FHCS
Sbjct: 268 FHCS 271
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 FHCSADGR 10
+ C ADG+
Sbjct: 119 YLCGADGK 126
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 FHCSADGR 10
+ C ADG+
Sbjct: 119 YLCGADGK 126
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RGFHCSADG 9
+ H SADG
Sbjct: 309 KDLHLSADG 317
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 GFHCSADG 9
G+H A+G
Sbjct: 87 GYHVKANG 94
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 2 GFHCSADG 9
G+H A+G
Sbjct: 87 GYHVKANG 94
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 2 GFHCSADG 9
G+H A+G
Sbjct: 87 GYHVKANG 94
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 2 GFHCSADG 9
G+H A+G
Sbjct: 87 GYHVKANG 94
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 3 FHCSAD 8
F+C+AD
Sbjct: 343 FNCTAD 348
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 3 FHCSAD 8
F+C+AD
Sbjct: 343 FNCTAD 348
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 3 FHCSAD 8
F+C+AD
Sbjct: 343 FNCTAD 348
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 3 FHCSAD 8
F+C+AD
Sbjct: 343 FNCTAD 348
>sp|IL18B_MONPV|INTERLEUKIN-18-BINDING protein|Monkeypox virus (MPXV)
Query: 3 FHCSA 7
FHCS
Sbjct: 37 FHCSG 41
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 3 FHCSAD 8
F+C+AD
Sbjct: 344 FNCTAD 349
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 3 FHCSAD 8
F+C+AD
Sbjct: 344 FNCTAD 349
22|Sequence|106|115|SADGRSCFQR
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 3 DGRSCFQR 10
DG CFQR
Sbjct: 272 DGPPCFQR 279
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 3 DGRSCFQ 9
DGR C+Q
Sbjct: 39 DGRYCYQ 45
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DGRSCFQ 9
DG SCF+
Sbjct: 724 DGLSCFK 730
Query: 1 SADGRSCF 8
SADG C+
Sbjct: 2875 SADGVQCY 2882
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DGRSCFQ 9
DG SCF+
Sbjct: 724 DGLSCFK 730
Query: 1 SADGRSCF 8
SADG C+
Sbjct: 2875 SADGVQCY 2882
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 SADGRSCFQR 10
S DGR C R
Sbjct: 685 STDGRLCAYR 694
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 GRSCFQ 9
G+SCF+
Sbjct: 7066 GKSCFE 7071
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 3 DGRSCFQR 10
DGR C R
Sbjct: 165 DGRYCVMR 172
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 5 RSCFQR 10
++CFQR
Sbjct: 385 QACFQR 390
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SADGRSCFQ 9
+ DG+ CF+
Sbjct: 442 TVDGQRCFR 450
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SADGRSCFQ 9
+ DG+ CF+
Sbjct: 442 TVDGQRCFR 450
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 1 SADGRSC 7
S DGR C
Sbjct: 51 SVDGREC 57
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 3 DGRSCFQ 9
DG CF+
Sbjct: 482 DGNGCFE 488
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 3 DGRSCFQ 9
DG CF+
Sbjct: 482 DGNGCFE 488
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 3 DGRSCFQ 9
DG CF+
Sbjct: 482 DGNGCFE 488
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 3 DGRSCFQ 9
DG CF+
Sbjct: 482 DGNGCFE 488
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 3 DGRSCFQ 9
DG CF+
Sbjct: 482 DGNGCFE 488
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 3 DGRSCFQ 9
DG CF+
Sbjct: 482 DGNGCFE 488
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 3 DGRSCFQ 9
DG CF+
Sbjct: 482 DGNGCFE 488
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 3 DGRSCFQ 9
DG CF+
Sbjct: 482 DGNGCFE 488
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 4 GRSCF 8
G+SCF
Sbjct: 483 GKSCF 487
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 3 DGRSCFQ 9
DG CF+
Sbjct: 482 DGNGCFE 488
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 3 DGRSCFQ 9
DG CF+
Sbjct: 482 DGNGCFE 488
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 4 GRSCF 8
G+SCF
Sbjct: 477 GKSCF 481
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 4 GRSCF 8
G+SCF
Sbjct: 480 GKSCF 484
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 4 GRSCF 8
G+SCF
Sbjct: 482 GKSCF 486
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 4 GRSCF 8
G+SCF
Sbjct: 481 GKSCF 485
23|Sequence|111|120|SCFQRSGNNS
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 2 CFQRS 6
CFQRS
Sbjct: 208 CFQRS 212
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 2 CFQRS 6
CFQRS
Sbjct: 208 CFQRS 212
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 2 CFQRS 6
CFQRS
Sbjct: 208 CFQRS 212
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 CFQRS 6
CFQRS
Sbjct: 208 CFQRS 212
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 CFQRS 6
CFQRS
Sbjct: 276 CFQRS 280
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 CFQRS 6
CFQRS
Sbjct: 208 CFQRS 212
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 CFQRS 6
CFQRS
Sbjct: 208 CFQRS 212
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 1 SCFQRS 6
SC+QRS
Sbjct: 278 SCWQRS 283
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SCFQRS 6
SC+QRS
Sbjct: 278 SCWQRS 283
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 SCFQRSGN 8
SCF+ GN
Sbjct: 7068 SCFEIDGN 7075
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 QRSGNN 9
+RSGNN
Sbjct: 473 RRSGNN 478
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 QRSGNN 9
+RSGNN
Sbjct: 473 RRSGNN 478
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 2 CFQRSGN 8
CF++ GN
Sbjct: 109 CFKKQGN 115
>sp|RP18_MONPV|DNA-DIRECTED RNA polymerase 18 kDa|Monkeypox virus (MPXV)
Query: 2 CFQRSGN 8
CF R+GN
Sbjct: 123 CFFRNGN 129
>sp|RP18_VACCA|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CFQRSGN 8
CF R+GN
Sbjct: 123 CFFRNGN 129
>sp|RP18_VACCC|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CFQRSGN 8
CF R+GN
Sbjct: 123 CFFRNGN 129
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 2 CFQRSG 7
CF++SG
Sbjct: 109 CFKKSG 114
>sp|RP18_VARV|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus
Query: 2 CFQRSGN 8
CF R+GN
Sbjct: 123 CFFRNGN 129
>sp|RP18_VAR67|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 CFQRSGN 8
CF R+GN
Sbjct: 123 CFFRNGN 129
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 1 SCFQRS 6
+CFQR+
Sbjct: 136 NCFQRT 141
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 1 SCFQRS 6
+CFQR+
Sbjct: 141 NCFQRT 146
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 SCFQRS 6
+CFQR+
Sbjct: 141 NCFQRT 146
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 1 SCFQRS 6
+CFQR+
Sbjct: 141 NCFQRT 146
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 1 SCFQRS 6
+CFQR+
Sbjct: 141 NCFQRT 146
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 SCFQRS 6
+CFQR+
Sbjct: 136 NCFQRT 141
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 SCFQRS 6
+CFQR+
Sbjct: 136 NCFQRT 141
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 SCFQRS 6
+CFQR+
Sbjct: 136 NCFQRT 141
>sp|VGPCR_HHV8P|VIRAL G-protein coupled receptor|Human herpesvirus 8 type P
Query: 2 CFQRSGN 8
C++ +GN
Sbjct: 196 CYENAGN 202
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 1 SCFQRS 6
+CFQR+
Sbjct: 136 NCFQRT 141
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 1 SCFQRSG 7
SC++R G
Sbjct: 283 SCYKREG 289
24|Sequence|116|125|SGNNSVGAIQ
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNQVGSLQ 146
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1SC|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 54 AGHNKVGSLQ 63
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 138 AGHNKVGSLQ 147
>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 138 AGHNKVGSLQ 147
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV192|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 SGNNSVGAIQ 10
+G+N VG++Q
Sbjct: 137 AGHNKVGSLQ 146
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 SGNNSVGAIQ 10
SGN V A+Q
Sbjct: 1262 SGNTVVCAVQ 1271
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 SGNNSVGAIQ 10
SGN V A+Q
Sbjct: 1263 SGNTVVCAVQ 1272
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 SGNNSVG 7
SGN++VG
Sbjct: 2534 SGNDAVG 2540
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 SGNNSVG 7
SGN SVG
Sbjct: 206 SGNVSVG 212
25|Sequence|121|130|VGAIQCPDSQ
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 4 IQCPDS 9
I CPDS
Sbjct: 199 IHCPDS 204
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 4 IQCPDS 9
I CPDS
Sbjct: 199 IHCPDS 204
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 QCPDSQ 10
+CPD+Q
Sbjct: 917 ECPDNQ 922
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 3 AIQCPDSQ 10
A +CPD Q
Sbjct: 436 ATRCPDKQ 443
>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AIQCPDSQ 10
A++CPD +
Sbjct: 55 ALRCPDGE 62
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 3 AIQCPDS 9
+I CPDS
Sbjct: 135 SIYCPDS 141
>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AIQCPDSQ 10
A++CPD +
Sbjct: 55 ALRCPDGE 62
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 3 AIQCPDS 9
+I CPDS
Sbjct: 192 SIYCPDS 198
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 QCPDSQ 10
+CPD Q
Sbjct: 917 ECPDEQ 922
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 QCPDSQ 10
+CPD Q
Sbjct: 916 ECPDDQ 921
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 4 IQCPD 8
+QCPD
Sbjct: 181 VQCPD 185
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 3 AIQCPDS 9
+I CPDS
Sbjct: 192 SIYCPDS 198
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 3 AIQCPDS 9
+I CPDS
Sbjct: 192 SIYCPDS 198
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 1 VGAIQCPDSQ 10
+GA+QC + Q
Sbjct: 488 LGALQCHECQ 497
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 5 QCPD 8
QCPD
Sbjct: 39 QCPD 42
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 5 QCPD 8
QCPD
Sbjct: 39 QCPD 42
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 5 QCPD 8
QCPD
Sbjct: 42 QCPD 45
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 5 QCPD 8
QCPD
Sbjct: 42 QCPD 45
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 VGAIQCPDSQ 10
+GA+QC + Q
Sbjct: 488 LGALQCHECQ 497
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AIQCPDSQ 10
++CPD++
Sbjct: 133 GLRCPDNR 140
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AIQCPDSQ 10
++CPD++
Sbjct: 133 GLRCPDNR 140
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VGAIQCPD 8
V AIQ PD
Sbjct: 827 VQAIQLPD 834
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 3 AIQCPDSQ 10
+ CP SQ
Sbjct: 562 GVSCPQSQ 569
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 3 AIQCPDSQ 10
+ CP SQ
Sbjct: 562 GVSCPQSQ 569
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 3 AIQCP 7
AIQCP
Sbjct: 109 AIQCP 113
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 3 AIQCP 7
AIQCP
Sbjct: 107 AIQCP 111
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 AIQCPDSQ 10
+ CP SQ
Sbjct: 562 GVSCPQSQ 569
>sp|VNB_INBLE|GLYCOPROTEIN NB|Influenza B virus (strain B/Lee/1940)
Query: 4 IQCPDSQ 10
I+CPD +
Sbjct: 60 IKCPDCE 66
26|Sequence|126|135|CPDSQFECPD
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 1 CPDSQFECPD 10
C DSQ +C D
Sbjct: 161 CSDSQIDCSD 170
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 PDSQFEC 8
P+SQ++C
Sbjct: 346 PESQYQC 352
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 PDSQFEC 8
P+SQ++C
Sbjct: 346 PESQYQC 352
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 2 PDSQFEC 8
P+SQ++C
Sbjct: 346 PESQYQC 352
>sp|PG031_VAR67|PROTEIN C4|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CPDSQFECPD 10
C D FE PD
Sbjct: 224 CMDHIFELPD 233
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CPDSQFECP 9
CP F CP
Sbjct: 1029 CPRGGFICP 1037
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CPDSQFECP 9
CP F CP
Sbjct: 1029 CPRGGFICP 1037
>sp|VTF3S_VACCC|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Copenhagen)
Query: 3 DSQFEC 8
DSQF C
Sbjct: 235 DSQFTC 240
>sp|VTF3S_VACCA|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Ankara) (VACV)
Query: 3 DSQFEC 8
DSQF C
Sbjct: 235 DSQFTC 240
>sp|VTF3S_MONPV|INTERMEDIATE transcription factor 3 small|Monkeypox virus (MPXV)
Query: 3 DSQFEC 8
DSQF C
Sbjct: 235 DSQFTC 240
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 3 DSQFECP 9
++QF CP
Sbjct: 385 ETQFPCP 391
Query: 2 PDSQFEC 8
PD +EC
Sbjct: 1225 PDPAYEC 1231
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CPDSQFE 7
CP + FE
Sbjct: 198 CPKTSFE 204
>sp|UL135_HCMVM|PROTEIN UL135|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PDSQFECPD 10
P ++FE PD
Sbjct: 109 PPARFEIPD 117
>sp|UL135_HCMVT|PROTEIN UL135|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PDSQFECPD 10
P ++FE PD
Sbjct: 109 PPARFEIPD 117
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 CPDSQFEC 8
CP + EC
Sbjct: 884 CPPIKLEC 891
>sp|VTF3S_VARV|INTERMEDIATE transcription factor 3 small|Variola virus
Query: 3 DSQFEC 8
DSQF C
Sbjct: 235 DSQFIC 240
>sp|VTF3S_VAR67|INTERMEDIATE transcription factor 3 small|Variola virus (isolate
Query: 3 DSQFEC 8
DSQF C
Sbjct: 235 DSQFIC 240
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 CPDSQFEC 8
CP + EC
Sbjct: 884 CPPIKLEC 891
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 DSQFECPD 10
DS+ E PD
Sbjct: 649 DSKHEMPD 656
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 DSQFECPD 10
DS+ E PD
Sbjct: 649 DSKHEMPD 656
>sp|PG031_MONPV|PROTEIN OPG031|Monkeypox virus (MPXV)
Query: 1 CPDSQFECPD 10
C D FE P+
Sbjct: 224 CMDHIFELPN 233
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 PDSQFEC 8
PD++ EC
Sbjct: 344 PDNRTEC 350
>sp|PG031_VACCC|PROTEIN C4|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CPDSQFECPD 10
C D FE P+
Sbjct: 224 CMDHIFELPN 233
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 CPDSQFEC 8
C D+QF C
Sbjct: 157 CLDAQFVC 164
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 CPDSQFEC 8
C D+QF C
Sbjct: 157 CLDAQFVC 164
27|Sequence|131|140|FECPDFSTCC
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 3 CPDFST 8
CPDFST
Sbjct: 150 CPDFST 155
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 2 ECPDFSTC 9
+CP F+TC
Sbjct: 492 QCPRFNTC 499
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 CPDFS 7
CPDFS
Sbjct: 556 CPDFS 560
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 CPDFS 7
CPDFS
Sbjct: 557 CPDFS 561
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 FECPDF 6
F CP+F
Sbjct: 727 FRCPNF 732
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 FECPDFS 7
F CPDF+
Sbjct: 883 FSCPDFT 889
>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FECPDFSTC 9
F PD+S C
Sbjct: 3 FYLPDWSCC 11
>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FECPDFSTC 9
F PD+S C
Sbjct: 3 FYLPDWSCC 11
>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FECPDFSTC 9
F PD+S C
Sbjct: 3 FYLPDWSCC 11
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 4 PDFSTCC 10
PD ST C
Sbjct: 10 PDVSTIC 16
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 4 PDFSTCC 10
PD ST C
Sbjct: 10 PDVSTIC 16
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ECPDFST 8
+CP F T
Sbjct: 67 QCPSFGT 73
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ECPDFST 8
+CP F T
Sbjct: 67 QCPSFGT 73
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 ECPDFST 8
+CP F T
Sbjct: 67 QCPSFGT 73
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 CPDF 6
CPDF
Sbjct: 545 CPDF 548
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 CPDF 6
CPDF
Sbjct: 545 CPDF 548
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 ECPD 5
ECPD
Sbjct: 935 ECPD 938
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 3 CPDFSTCC 10
CP +T C
Sbjct: 418 CPIIATSC 425
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CPDFSTCC 10
CP +T C
Sbjct: 418 CPIIATSC 425
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 3 CPDFSTCC 10
CP +T C
Sbjct: 418 CPIIATSC 425
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 ECPDF 6
ECP+F
Sbjct: 269 ECPNF 273
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 1 FECPDFSTC 9
CPD TC
Sbjct: 313 LACPDTRTC 321
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 ECPDF 6
ECP+F
Sbjct: 269 ECPNF 273
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 PDFSTCC 10
PD CC
Sbjct: 891 PDVIPCC 897
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 ECPDFSTCC 10
+C D CC
Sbjct: 318 QCRDQELCC 326
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 CPDFSTC 9
CP+ +TC
Sbjct: 6167 CPNRATC 6173
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 ECPDFSTCC 10
+C D CC
Sbjct: 318 QCRDQELCC 326
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 4 PDFSTC 9
PD +TC
Sbjct: 125 PDVATC 130
28|Sequence|136|145|FSTCCVMVDG
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 STCCVM 7
STCCV+
Sbjct: 101 STCCVL 106
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 STCCVM 7
STCCV+
Sbjct: 101 STCCVL 106
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TCCVMVD 9
TCCV+ D
Sbjct: 445 TCCVITD 451
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 3 TCCVMVD 9
T CVMVD
Sbjct: 61 TGCVMVD 67
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 STCCVM-VDG 10
S+CCV VDG
Sbjct: 1375 SSCCVRSVDG 1384
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 FSTCCVMVDG 10
F+ C++ DG
Sbjct: 191 FNQTCILFDG 200
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FSTCCVMVDG 10
F+ C++ DG
Sbjct: 191 FNQTCILFDG 200
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FSTCCVMVDG 10
F+ C++ DG
Sbjct: 192 FNQTCILFDG 201
>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)
Query: 1 FSTCCVM 7
FSTC V+
Sbjct: 240 FSTCAVL 246
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 3 TCCVMVDG 10
TC V++DG
Sbjct: 323 TCGVLMDG 330
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 STCCVMVDG 10
S C +++DG
Sbjct: 77 SNCTMIIDG 85
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 STCCVMVDG 10
S C +++DG
Sbjct: 68 SNCSMIIDG 76
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 STCCVMVDG 10
S C +++DG
Sbjct: 68 SNCSMIIDG 76
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 1 FSTCCVMVDG 10
F CC DG
Sbjct: 210 FLHCCFRTDG 219
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 FSTCCVMVDG 10
F CC DG
Sbjct: 210 FLHCCFRTDG 219
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 2 STCCVMVD 9
STC +VD
Sbjct: 98 STCVSLVD 105
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 TCCVMVDG 10
T CV VDG
Sbjct: 6382 TPCVYVDG 6389
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 TCCVMVDG 10
T CV VDG
Sbjct: 6402 TPCVYVDG 6409
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 TCCVMVDG 10
T CV VDG
Sbjct: 6432 TPCVYVDG 6439
>sp|PG031_VACCC|PROTEIN C4|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FSTCCVMVD 9
T CV+VD
Sbjct: 188 LETICVLVD 196
>sp|PG031_MONPV|PROTEIN OPG031|Monkeypox virus (MPXV)
Query: 1 FSTCCVMVD 9
T CV+VD
Sbjct: 188 LETMCVLVD 196
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 2 STCCVM 7
+TCC++
Sbjct: 383 ATCCML 388
29|Sequence|141|150|VMVDGSWGCC
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 MVDGSWGC 9
+V G WGC
Sbjct: 75 VVKGCWGC 82
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 2 MVDGSWGC 9
+V G WGC
Sbjct: 74 VVKGCWGC 81
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 3 VDGSWGC 9
+ GSWGC
Sbjct: 363 LQGSWGC 369
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 3 VDGSWGC 9
+ GSWGC
Sbjct: 363 LQGSWGC 369
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 MVDGSWGC 9
MVD +GC
Sbjct: 226 MVDTGFGC 233
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 2 MVDGSWGC 9
MVD +GC
Sbjct: 229 MVDTGFGC 236
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 2 MVDGSWGC 9
MVD +GC
Sbjct: 200 MVDTGFGC 207
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 5 GSWGC 9
G WGC
Sbjct: 1067 GIWGC 1071
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 5 GSWGC 9
G WGC
Sbjct: 131 GKWGC 135
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 MVDGSW 7
++DGSW
Sbjct: 254 LMDGSW 259
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 376 MVDRGWG 382
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 376 MVDRGWG 382
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 376 MVDRGWG 382
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 376 MVDRGWG 382
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 376 MVDRGWG 382
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 376 MVDRGWG 382
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 MVDGSW 7
++DGSW
Sbjct: 254 LLDGSW 259
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 376 MVDRGWG 382
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 5 GSWGC 9
G WGC
Sbjct: 131 GKWGC 135
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 96 MVDRGWG 102
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 5 GSWGC 9
G WGC
Sbjct: 131 GKWGC 135
>sp|PG051_MONPV|PROTEIN OPG051|Monkeypox virus (MPXV)
Query: 4 DGSWGCC 10
DG GCC
Sbjct: 20 DGREGCC 26
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 375 MVDRGWG 381
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 3 VDGSWGC 9
+ G WGC
Sbjct: 363 LQGGWGC 369
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 3 VDGSWGC 9
+ G WGC
Sbjct: 363 LQGGWGC 369
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 DGSWG 8
+GSWG
Sbjct: 1333 EGSWG 1337
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 DGSWG 8
+GSWG
Sbjct: 1333 EGSWG 1337
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 DGSWG 8
+GSWG
Sbjct: 1333 EGSWG 1337
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 DGSWG 8
+GSWG
Sbjct: 1333 EGSWG 1337
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 DGSWG 8
+GSWG
Sbjct: 1333 EGSWG 1337
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 2 MVDGSW 7
++DGSW
Sbjct: 254 LMDGSW 259
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 3 VDGSWGC 9
+ G WGC
Sbjct: 363 LQGGWGC 369
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 3 VDGSWGC 9
+ G WGC
Sbjct: 363 LQGGWGC 369
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 2 MVDGSWGC 9
M+D +GC
Sbjct: 230 MIDTGFGC 237
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 VDGSWG 8
+DG+WG
Sbjct: 983 IDGAWG 988
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 VDGSWGC 9
+ G WGC
Sbjct: 363 LQGGWGC 369
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 3 VDGSWG 8
+DG+WG
Sbjct: 984 IDGAWG 989
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 3 VDGSWG 8
+DG+WG
Sbjct: 988 IDGAWG 993
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 592 SWGC 595
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 3 VDGSWGC 9
+ G WGC
Sbjct: 363 LQGGWGC 369
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 VDGSWG 8
+DG+WG
Sbjct: 982 IDGAWG 987
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 VDGSWG 8
+DG+WG
Sbjct: 988 IDGAWG 993
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 3 VDGSWG 8
+DG+WG
Sbjct: 982 IDGAWG 987
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 3 VDGSWGC 9
+ G WGC
Sbjct: 363 LQGGWGC 369
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 597 SWGC 600
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 6 SWGC 9
SWGC
Sbjct: 1065 SWGC 1068
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 596 GMWGC 600
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 3 VDGSWG 8
+DG+WG
Sbjct: 988 IDGAWG 993
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 585 SWGC 588
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 3 VDGSWG 8
+DG+WG
Sbjct: 173 IDGAWG 178
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 596 SWGC 599
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 145 MVDRGWG 151
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 VDGSWG 8
VDG+W
Sbjct: 116 VDGNWA 121
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 376 MVDRGWG 382
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 6 SWGC 9
SWGC
Sbjct: 1065 SWGC 1068
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 6 SWGC 9
SWGC
Sbjct: 1065 SWGC 1068
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 595 SWGC 598
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 589 GIWGC 593
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 MVDGSW 7
++DGSW
Sbjct: 15 VLDGSW 20
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 593 SWGC 596
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 3 VDGSWG 8
+DG+WG
Sbjct: 76 IDGAWG 81
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 588 GIWGC 592
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 585 GIWGC 589
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 581 GIWGC 585
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 586 GIWGC 590
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 580 GIWGC 584
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 586 SWGC 589
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 594 SWGC 597
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 588 SWGC 591
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 601 GIWGC 605
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 570 GIWGC 574
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 590 GIWGC 594
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 593 GIWGC 597
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 581 GIWGC 585
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 580 GIWGC 584
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 584 GLWGC 588
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 585 SWGC 588
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 593 GIWGC 597
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 597 GIWGC 601
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 586 GIWGC 590
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 584 GIWGC 588
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 593 GIWGC 597
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 583 GIWGC 587
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 591 GIWGC 595
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 584 SWGC 587
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 591 GIWGC 595
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 595 GFWGC 599
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 96 MVDRGWG 102
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 586 SWGC 589
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 588 GIWGC 592
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 600 GIWGC 604
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 605 GIWGC 609
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 594 GIWGC 598
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 582 GIWGC 586
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 587 GIWGC 591
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 MVDGSWG 8
MVD WG
Sbjct: 276 MVDRGWG 282
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 591 GIWGC 595
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 589 GIWGC 593
>sp|YVAN_VACCC|UNCHARACTERIZED 7.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VMVDGSWG 8
++VD WG
Sbjct: 28 IIVDSLWG 35
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 594 GIWGC 598
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 603 GIWGC 607
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 594 GIWGC 598
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 592 GIWGC 596
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 594 GIWGC 598
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 SWGC 9
SWGC
Sbjct: 588 SWGC 591
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 594 GIWGC 598
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 594 GIWGC 598
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 590 GIWGC 594
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 599 GIWGC 603
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 585 GIWGC 589
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 606 GFWGC 610
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GSWGC 9
G WGC
Sbjct: 594 GIWGC 598
>sp|M2_I71A1|MATRIX protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 3 VDGSWGC 9
+ WGC
Sbjct: 11 IKNEWGC 17
>sp|M2_I07A0|MATRIX protein 2|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 VDGSWGC 9
+ WGC
Sbjct: 8 IRNEWGC 14
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 DGSWGC 9
DGS GC
Sbjct: 2040 DGSLGC 2045
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 DGSWGC 9
DGS GC
Sbjct: 2040 DGSLGC 2045
>sp|M2_I96A3|MATRIX protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 VDGSWGC 9
+ WGC
Sbjct: 11 IRNEWGC 17
>sp|M2_I00A1|MATRIX protein 2|Influenza A virus (strain A/New
Query: 3 VDGSWGC 9
+ WGC
Sbjct: 11 IRNEWGC 17
30|Sequence|146|155|SWGCCPMPQA
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GCCPMPQ 9
GC P+P+
Sbjct: 1390 GCLPLPR 1396
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 SWGCCPMP 8
W CP+P
Sbjct: 172 EWNLCPLP 179
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 WGCCPM 7
WG CP+
Sbjct: 2492 WGFCPL 2497
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 SWGCCPMP 8
W CP+P
Sbjct: 171 EWNMCPLP 178
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 SWGCCPMPQ 9
S G C +PQ
Sbjct: 394 SLGSCDLPQ 402
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 SWGCCPMPQ 9
S G C +PQ
Sbjct: 394 SLGSCDLPQ 402
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SWGCCPMP 8
S+ CCP P
Sbjct: 61 SYLCCPEP 68
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SWGCCPMP 8
S+ CCP P
Sbjct: 61 SYLCCPEP 68
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 WGCCPMP 8
W C MP
Sbjct: 215 WACTLMP 221
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 WGCCPMP 8
W C MP
Sbjct: 215 WACTLMP 221
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 SWGCCP 6
SWGC P
Sbjct: 761 SWGCNP 766
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 SWGCCP 6
SWGC P
Sbjct: 762 SWGCNP 767
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 SWGCCP 6
SWGC P
Sbjct: 762 SWGCNP 767
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 SWGCCP 6
SWGC P
Sbjct: 766 SWGCNP 771
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 GCCPMPQA 10
GCCP A
Sbjct: 119 GCCPACSA 126
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 SWGCCP 6
SWGC P
Sbjct: 766 SWGCNP 771
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 GCCP 6
GCCP
Sbjct: 385 GCCP 388
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 GCCPMPQ 9
CC +P+
Sbjct: 1208 ACCSLPE 1214
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 GCCPMPQ 9
CC +P+
Sbjct: 1208 ACCSLPE 1214
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 3 GCCP 6
GCCP
Sbjct: 446 GCCP 449
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 3 GCCPMPQA 10
GCCP A
Sbjct: 120 GCCPACNA 127
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 3 GCCP 6
GCCP
Sbjct: 512 GCCP 515
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 SWGCCPMPQA 10
S CC PQA
Sbjct: 131 SLSCCNYPQA 140
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 5 CPMPQA 10
CP P+A
Sbjct: 770 CPEPEA 775
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 5 CPMPQA 10
CP P+A
Sbjct: 770 CPEPEA 775
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CCPMP 8
C PMP
Sbjct: 231 CIPMP 235
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CCPMP 8
C PMP
Sbjct: 231 CIPMP 235
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 5 CPMPQA 10
CP P+A
Sbjct: 770 CPEPEA 775
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 2 WGCCP 6
+GCCP
Sbjct: 105 YGCCP 109
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 5 CPMPQA 10
CPMP +
Sbjct: 380 CPMPSS 385
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 5 CPMPQA 10
CP P+A
Sbjct: 770 CPEPEA 775
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 WGCCPMPQA 10
W C P+A
Sbjct: 311 WNECQQPEA 319
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 WGCCPMPQA 10
W C P+A
Sbjct: 311 WNECQQPEA 319
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 2 WGCCPMPQA 10
W C P+A
Sbjct: 311 WNECQQPEA 319
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 SWGCCPMPQA 10
S G C +P++
Sbjct: 413 SLGSCDLPES 422
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 WGCCP 6
+GCCP
Sbjct: 105 YGCCP 109
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 SWGCCPMPQA 10
S G C +P++
Sbjct: 413 SLGSCDLPES 422
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 CCPMPQA 10
CC PQA
Sbjct: 134 CCNYPQA 140
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 SWGCCPMPQA 10
S G C +P++
Sbjct: 413 SLGSCDLPES 422
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 SWGCCPMPQA 10
S G C +P++
Sbjct: 413 SLGSCDLPES 422
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 2 WGCCPMP 8
WG P+P
Sbjct: 573 WGGSPLP 579
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 CCPMPQA 10
CC PQA
Sbjct: 134 CCNYPQA 140
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 3 GCCPMPQ 9
G CP P
Sbjct: 467 GSCPKPH 473
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 SWGCCPMPQA 10
S G C +P++
Sbjct: 414 SLGSCDLPES 423
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 SWGCCPMPQA 10
S G C +P++
Sbjct: 414 SLGSCDLPES 423
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 3 GCCPMPQ 9
G CP P
Sbjct: 467 GSCPKPH 473
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 CCPMPQA 10
CC PQA
Sbjct: 134 CCNYPQA 140
>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 CPMPQ 9
CP PQ
Sbjct: 218 CPSPQ 222
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 GCCPMPQA 10
G CP P++
Sbjct: 1418 GICPRPES 1425
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 CCPMPQA 10
CC PQA
Sbjct: 134 CCNYPQA 140
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 CCPMPQA 10
CC PQA
Sbjct: 134 CCNYPQA 140
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 GCCPMPQA 10
G CP P++
Sbjct: 1418 GICPRPES 1425
31|Sequence|151|160|PMPQASCCED
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 PMPQASCCED 10
P+P+ + C D
Sbjct: 440 PLPKKTTCVD 449
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 PMPQASCC 8
P PQ CC
Sbjct: 853 PSPQVKCC 860
>sp|SPIKE_ADE03|FIBER protein|Human adenovirus B serotype 3
Query: 1 PMPQASC 7
P P+A+C
Sbjct: 137 PKPEANC 143
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PMPQASCC 8
P P+ +CC
Sbjct: 440 PNPEFTCC 447
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 ASCCED 10
ASCC D
Sbjct: 2021 ASCCLD 2026
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 5 ASCCED 10
ASCC D
Sbjct: 2014 ASCCLD 2019
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 ASCCED 10
ASCC D
Sbjct: 2018 ASCCLD 2023
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PQASCCED 10
PQA C D
Sbjct: 253 PQAPCALD 260
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 ASCCED 10
ASCC D
Sbjct: 2041 ASCCLD 2046
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PQASCCED 10
PQA C D
Sbjct: 253 PQAPCALD 260
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 6 SCCED 10
SCCE+
Sbjct: 193 SCCEN 197
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 ASCCED 10
ASCC D
Sbjct: 2040 ASCCLD 2045
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 ASCCED 10
ASCC D
Sbjct: 2032 ASCCLD 2037
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 ASCCED 10
ASCC D
Sbjct: 2040 ASCCLD 2045
32|Sequence|156|165|SCCEDRVHCC
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 SCCEDRVHC 9
S C ++VHC
Sbjct: 518 SSCPNKVHC 526
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 SCCEDRVHCC 10
S C +R+ CC
Sbjct: 450 SGCSERLACC 459
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka
Query: 2 CCEDRVHC 9
CC + +HC
Sbjct: 61 CCGELIHC 68
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 2 CCEDRVHC 9
CC + +HC
Sbjct: 61 CCGELIHC 68
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 3 CEDRVH 8
CED VH
Sbjct: 359 CEDHVH 364
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 2 CCEDRVH 8
CC DR H
Sbjct: 531 CCIDRKH 537
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 1 SCCEDRV 7
+ CEDR+
Sbjct: 15 TLCEDRI 21
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 CEDRVHCC 10
CE + CC
Sbjct: 1429 CETFLRCC 1436
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 SCCEDRVHCC 10
+C E H C
Sbjct: 157 TCVEQMYHAC 166
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CEDRVHC 9
CED + C
Sbjct: 23 CEDAIRC 29
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169)
Query: 3 CEDRVHC 9
CED + C
Sbjct: 23 CEDAIRC 29
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 EDRVHCC 10
ED V CC
Sbjct: 2417 EDNVVCC 2423
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 2 CCEDRVH 8
CC DR H
Sbjct: 535 CCIDRKH 541
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 CEDRVHCC 10
CE + CC
Sbjct: 1343 CETFLRCC 1350
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 1 SCCEDRVHC 9
S C R+HC
Sbjct: 181 SLCYMRMHC 189
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 2 CCEDRVHC 9
CC + HC
Sbjct: 174 CCLYKQHC 181
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 SCCEDRVH 8
SC +R H
Sbjct: 1093 SCSSERAH 1100
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 CEDRVHCC 10
C D+ CC
Sbjct: 319 CRDQELCC 326
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 3 CEDRVHCC 10
C D+ CC
Sbjct: 319 CRDQELCC 326
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 2 CCEDRVHC 9
CC + V C
Sbjct: 285 CCAEDVSC 292
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CEDRVHC 9
C D V+C
Sbjct: 501 CTDYVYC 507
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CEDRVHC 9
C D V+C
Sbjct: 501 CTDYVYC 507
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 CCEDRVH 8
CC R H
Sbjct: 747 CCAPRAH 753
33|Sequence|161|170|RVHCCPHGAF
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 CCPHGAF 10
CCP G+F
Sbjct: 1640 CCPIGSF 1646
>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G
Query: 3 HCCPH 7
HC PH
Sbjct: 59 HCSPH 63
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 2 VHCCPHGA 9
VH PHGA
Sbjct: 35 VHSNPHGA 42
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HCCPHGA 9
H CPH A
Sbjct: 279 HACPHYA 285
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 3 HCCPH 7
HC PH
Sbjct: 59 HCSPH 63
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 3 HCCPH 7
HC PH
Sbjct: 59 HCSPH 63
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HCCPHGA 9
H CPH A
Sbjct: 279 HACPHYA 285
>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 5 CPHGAF 10
CPHG
Sbjct: 1939 CPHGVL 1944
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 5 CPHGAF 10
CPHG
Sbjct: 1939 CPHGVL 1944
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|PG140_VARV|VIRION membrane protein OPG140|Variola virus
Query: 3 HCCPH 7
HC PH
Sbjct: 70 HCAPH 74
>sp|PG140_VAR67|VIRION membrane protein OPG140|Variola virus (isolate
Query: 3 HCCPH 7
HC PH
Sbjct: 70 HCAPH 74
>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|PG140_VACCC|VIRION membrane protein OPG140|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 HCCPH 7
HC PH
Sbjct: 70 HCAPH 74
>sp|PG140_MONPV|VIRION membrane protein OPG140|Monkeypox virus (MPXV)
Query: 3 HCCPH 7
HC PH
Sbjct: 70 HCAPH 74
>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CCPHG 8
CC HG
Sbjct: 5068 CCSHG 5072
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CCPHG 8
CC HG
Sbjct: 5098 CCSHG 5102
>sp|CAPSD_HBVD3|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CCPHG 8
CC HG
Sbjct: 5048 CCSHG 5052
>sp|CAPSD_HBVD6|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|IORF_CVHOC|PROTEIN I|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VHCCPHGAF 10
V+CC G F
Sbjct: 97 VNCCHDGIF 105
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCSPH 51
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 47 HCTPH 51
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HCCPH 7
H CPH
Sbjct: 350 HLCPH 354
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HCCPH 7
H CPH
Sbjct: 350 HLCPH 354
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 HCCPHG 8
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 HCCPHG 8
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 HCCPHG 8
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 HCCPHG 8
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 HCCPHG 8
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 HCCPHG 8
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 HCCPHG 8
H CP G
Sbjct: 467 HSCPDG 472
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVC1|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCSPH 80
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 5 CPHGAF 10
CP G F
Sbjct: 1029 CPRGGF 1034
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 CPHGAF 10
CP G F
Sbjct: 1029 CPRGGF 1034
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 3 HCCPH 7
HC PH
Sbjct: 76 HCTPH 80
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 HCCPHG 8
HC PH
Sbjct: 1155 HCNPHA 1160
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 VHCCP 6
VH CP
Sbjct: 383 VHSCP 387
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 CPHG 8
CPHG
Sbjct: 570 CPHG 573
>sp|GJ_HHV2H|ENVELOPE glycoprotein J|Human herpesvirus 2 (strain HG52)
Query: 3 HCCPH 7
CCPH
Sbjct: 82 RCCPH 86
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 VHCCPH 7
VH C H
Sbjct: 29 VHICTH 34
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VHCCPH 7
VH C H
Sbjct: 29 VHICTH 34
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 2 VHCCPH 7
VH C H
Sbjct: 29 VHICTH 34
>sp|VE7_HPV12|PROTEIN E7|Human papillomavirus 12
Query: 5 CPHGAF 10
C HG F
Sbjct: 98 CKHGGF 103
34|Sequence|166|175|PHGAFCDLVH
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 GAFCDLVH 10
G FCDLVH
Sbjct: 756 GDFCDLVH 763
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 1 PHGAFCDLV 9
PHG C +V
Sbjct: 308 PHGIMCSIV 316
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 1 PHGAFCDLV 9
PHG C +V
Sbjct: 308 PHGIMCSIV 316
>sp|ORF23_TTVV4|PROBABLE protein VP2|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 HGAFC 6
HGAFC
Sbjct: 25 HGAFC 29
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PHGAFCDLVH 10
PH F LVH
Sbjct: 2311 PHPEFLGLVH 2320
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 PHGAFCDLVH 10
PH F LVH
Sbjct: 2284 PHPEFLGLVH 2293
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 PHGAFCDLVH 10
PH F LVH
Sbjct: 2289 PHPEFLGLVH 2298
>sp|ORF24_TTVV4|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 HGAFC 6
HGAFC
Sbjct: 25 HGAFC 29
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 2 HGAFCDLVH 10
GAF DLV
Sbjct: 223 EGAFADLVE 231
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 HGAFCD 7
+G+FCD
Sbjct: 834 YGSFCD 839
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 GAFCDLV 9
G +CDL+
Sbjct: 435 GGYCDLI 441
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 GAFCDLV 9
G +CDL+
Sbjct: 435 GGYCDLI 441
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 2 HGAFCD 7
HG FC+
Sbjct: 211 HGKFCN 216
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 HGAFCD 7
HG FC+
Sbjct: 211 HGKFCN 216
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 HGAFC 6
HG FC
Sbjct: 1226 HGGFC 1230
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 HGAFCD 7
+G FCD
Sbjct: 832 YGTFCD 837
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 HGAFCD 7
+G FCD
Sbjct: 832 YGTFCD 837
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 2 HGAFCDLVH 10
GAF DLV
Sbjct: 223 EGAFGDLVE 231
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 1 PHGAFCDLV 9
P+G C +V
Sbjct: 299 PYGIMCSIV 307
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 HGAFCD 7
+G FCD
Sbjct: 836 YGTFCD 841
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate
Query: 1 PHGAFCDLV 9
P GA C LV
Sbjct: 8 PAGAKCRLV 16
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 1 PHGAFCDLV 9
P GA C LV
Sbjct: 8 PAGAKCRLV 16
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PHGAFCDLV 9
P GA C LV
Sbjct: 8 PAGAKCRLV 16
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 PHGAFCDLV 9
P GA C LV
Sbjct: 8 PAGAKCRLV 16
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PHGAFCDLV 9
P GA C LV
Sbjct: 8 PAGAKCRLV 16
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 1 PHGAFCDLV 9
P GA C LV
Sbjct: 8 PAGAKCRLV 16
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 GAFCDLV 9
G FCD +
Sbjct: 1479 GPFCDAI 1485
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 GAFCDLV 9
G FCD +
Sbjct: 1480 GPFCDAI 1486
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 2 HGAFC 6
HG FC
Sbjct: 63 HGLFC 67
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 HGAFC 6
HG FC
Sbjct: 63 HGLFC 67
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain
Query: 3 GAFCDL 8
G FCD+
Sbjct: 18 GRFCDI 23
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 3 GAFCDL 8
G FCD+
Sbjct: 18 GRFCDI 23
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 3 GAFCDL 8
G FCD+
Sbjct: 18 GRFCDI 23
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton
Query: 3 GAFCDL 8
G FCD+
Sbjct: 18 GRFCDI 23
>sp|YVBA_VACCC|UNCHARACTERIZED 11.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GAFCDLV 9
GA+C LV
Sbjct: 10 GAYCKLV 16
>sp|UL92_HHV8P|PROTEIN ORF31|Human herpesvirus 8 type P
Query: 2 HGAFC 6
HG FC
Sbjct: 12 HGVFC 16
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 5 FCDLVH 10
FC+ VH
Sbjct: 177 FCETVH 182
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 2 HGAFCD 7
HGAF D
Sbjct: 181 HGAFLD 186
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 2 HGAFCD 7
HGAF D
Sbjct: 181 HGAFLD 186
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PHGAFC 6
PHGA C
Sbjct: 860 PHGACC 865
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PHGAFC 6
PHGA C
Sbjct: 860 PHGACC 865
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PHGAFC 6
PHGA C
Sbjct: 860 PHGACC 865
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GAFCDLVH 10
GAF LVH
Sbjct: 157 GAFRRLVH 164
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 HGAFCD 7
HGAF D
Sbjct: 181 HGAFLD 186
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GAFCDLVH 10
GAF LVH
Sbjct: 157 GAFRRLVH 164
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 HGAFCD 7
HG CD
Sbjct: 4058 HGCTCD 4063
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 HGAFCD 7
HGAF D
Sbjct: 181 HGAFLD 186
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 HGAFCD 7
HG CD
Sbjct: 4058 HGCTCD 4063
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 2 HGAFCD 7
HGAF D
Sbjct: 181 HGAFLD 186
35|Sequence|171|180|CDLVHTRCIT
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CDLVHTRCI 9
CD + TRC+
Sbjct: 6197 CDAIMTRCL 6205
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CDLVHTRCI 9
CD + TRC+
Sbjct: 6174 CDAIMTRCL 6182
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 5 HTRCI 9
HTRCI
Sbjct: 1286 HTRCI 1290
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 LVHTRC 8
+VHTRC
Sbjct: 2024 IVHTRC 2029
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CDLVHTRCIT 10
CD + C+T
Sbjct: 111 CDRYYMECVT 120
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LVHTRC 8
++HTRC
Sbjct: 2024 IMHTRC 2029
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 2 DLVHTRCIT 10
D+VH +C++
Sbjct: 37 DVVHPQCLS 45
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LVHTRC 8
++HTRC
Sbjct: 2024 IMHTRC 2029
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LVHTRC 8
++HTRC
Sbjct: 2024 IMHTRC 2029
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LVHTRCI 9
L +TRCI
Sbjct: 1153 LTNTRCI 1159
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 LVHTRC 8
++HT+C
Sbjct: 174 IIHTQC 179
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 CDLVHTRCIT 10
CD+ H C T
Sbjct: 551 CDICHHECET 560
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 3 LVHTRCI 9
L +TRCI
Sbjct: 830 LTNTRCI 836
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LVHTRCIT 10
LVH+ C T
Sbjct: 110 LVHSACAT 117
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LVHTRCIT 10
LVH+ C T
Sbjct: 110 LVHSACAT 117
36|Sequence|176|185|TRCITPTGTH
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 296 SECITPNGS 304
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 1 TRCITPTG 8
TRC TP G
Sbjct: 294 TRCQTPHG 301
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 294 SECITPNGS 302
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 TRCITPTGT 9
T+C TP G+
Sbjct: 293 TKCQTPQGS 301
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 TRCITPTG 8
TRC TP G
Sbjct: 294 TRCQTPHG 301
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 295 SECITPNGS 303
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPVG 299
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 4 ITPTGT 9
ITPTGT
Sbjct: 175 ITPTGT 180
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 4 ITPTGT 9
ITPTGT
Sbjct: 175 ITPTGT 180
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 4 ITPTGT 9
ITPTGT
Sbjct: 175 ITPTGT 180
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 4 ITPTGT 9
ITPTGT
Sbjct: 175 ITPTGT 180
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPMG 299
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPMG 299
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPMG 299
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 288 TKCQTPMG 295
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 284 TKCQTPMG 291
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPMG 299
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPMG 299
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPMG 299
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPMG 299
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 290 TKCQTPMG 297
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 281 TKCQTPMG 288
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 281 TKCQTPMG 288
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 281 TKCQTPMG 288
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 281 TKCQTPMG 288
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPMG 299
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPQG 301
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPIG 299
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPMG 299
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPQG 301
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 1 TRCITPTGT 9
+ CITP G+
Sbjct: 279 SECITPNGS 287
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPQG 301
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 292 TKCQTPMG 299
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPQG 301
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPQG 301
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPQG 301
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPQG 301
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPQG 301
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPQG 301
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 293 TKCQTPQG 300
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 TRCITPTGTH 10
T C+ PTG +
Sbjct: 174 TCCLRPTGIY 183
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 TRCITPTGTH 10
T C+ PTG +
Sbjct: 174 TCCLRPTGIY 183
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 1 TRCITPTGTH 10
T C+ PTG +
Sbjct: 174 TCCLRPTGIY 183
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 293 TKCQTPLG 300
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPQG 301
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 290 TKCQTPLG 297
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPKG 301
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPKG 301
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 RCITPT 7
RC TPT
Sbjct: 1406 RCKTPT 1411
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 290 TKCQTPLG 297
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPKG 301
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 290 TKCQTPLG 297
>sp|P30II_HTL1A|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 1 TRCITPTG 8
+RC++P G
Sbjct: 77 SRCVSPRG 84
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPYG 301
>sp|P30II_HTL1C|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 1 TRCITPTG 8
+RC++P G
Sbjct: 77 SRCVSPRG 84
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPHG 301
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 290 TKCQTPLG 297
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 3 CITPTGTH 10
C PTG H
Sbjct: 191 CKPPTGEH 198
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 TRCITPTGT 9
T C PTGT
Sbjct: 2238 TSCHLPTGT 2246
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPHG 301
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 5 TPTGTH 10
TP GTH
Sbjct: 1821 TPPGTH 1826
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 294 TKCQTPHG 301
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 3 CITPT 7
CITPT
Sbjct: 35 CITPT 39
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RCITP 6
RC+TP
Sbjct: 130 RCVTP 134
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 5 TPTGT 9
TPTGT
Sbjct: 1839 TPTGT 1843
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 TPTGT 9
TPTGT
Sbjct: 1839 TPTGT 1843
>sp|3BHS_VAR67|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Variola
Query: 1 TRCITPTGTH 10
T C+ PTG +
Sbjct: 56 TCCLRPTGIY 65
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 3 CITPTGTH 10
C PTG H
Sbjct: 188 CKPPTGEH 195
>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 TRCITPTG 8
T+C PTG
Sbjct: 131 TKCEYPTG 138
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 RCITP 6
RCITP
Sbjct: 720 RCITP 724
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 RCITP 6
RCITP
Sbjct: 720 RCITP 724
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 RCITP 6
RCITP
Sbjct: 720 RCITP 724
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 RCITP 6
RCITP
Sbjct: 719 RCITP 723
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 RCITP 6
RCITP
Sbjct: 719 RCITP 723
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TRCITPTG 8
++C+T TG
Sbjct: 171 SKCLTETG 178
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 RCITP 6
RCITP
Sbjct: 719 RCITP 723
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 3 CITPTGTH 10
C PTG H
Sbjct: 162 CKPPTGEH 169
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 RCITP 6
RC+TP
Sbjct: 434 RCLTP 438
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 RCITP 6
RCITP
Sbjct: 720 RCITP 724
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 RCITP 6
RC+TP
Sbjct: 434 RCLTP 438
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 4 ITPTGT 9
++PTGT
Sbjct: 648 VSPTGT 653
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 4 ITPTGT 9
++PTGT
Sbjct: 648 VSPTGT 653
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 CITPTGTH 10
C T GTH
Sbjct: 1300 CYTVLGTH 1307
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 1 TRCITPTG 8
T+C TP G
Sbjct: 290 TKCQTPLG 297
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 RCITPTGT 9
R I P+GT
Sbjct: 601 RVIVPSGT 608
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 4 ITPTGT 9
ITP GT
Sbjct: 176 ITPAGT 181
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 4 ITPTGT 9
ITP GT
Sbjct: 176 ITPAGT 181
37|Sequence|181|190|PTGTHPLAKK
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TGTHPLAK 9
T THPLA+
Sbjct: 211 TETHPLAQ 218
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TGTHPLAK 9
T THPLA+
Sbjct: 211 TETHPLAQ 218
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1738 SGTHPL 1743
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1737 SGTHPL 1742
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 TGTHPL 7
+GTHPL
Sbjct: 1738 SGTHPL 1743
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PTGTHPL 7
P G HP+
Sbjct: 390 PVGNHPV 396
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PTGTHPL 7
P G HP+
Sbjct: 390 PVGNHPV 396
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 PTGTHPLAKK 10
P G+HP ++
Sbjct: 132 PIGSHPRTER 141
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 PTGTHPLAKK 10
P GT P++++
Sbjct: 1503 PKGTFPVSQR 1512
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 PTGTHPLAKK 10
P GT P++++
Sbjct: 1511 PKGTFPVSQR 1520
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 PTGTHPLAK 9
P G+HPL +
Sbjct: 316 PVGSHPLGQ 324
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 PTGTHPLAKK 10
P GT P++++
Sbjct: 1502 PKGTFPVSQR 1511
>sp|NS1_I69A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/England/878/1969
Query: 3 GTHPLAKK 10
G HPL K
Sbjct: 210 GRHPLTPK 217
>sp|NS1_I67A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 GTHPLAKK 10
G HPL K
Sbjct: 210 GRHPLTPK 217
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 PTGTHPLAK 9
PT H +AK
Sbjct: 739 PTAEHGIAK 747
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 PTGTHPLAK 9
PT H +AK
Sbjct: 738 PTAEHGIAK 746
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 PTGTHPLAK 9
P G+HPL +
Sbjct: 316 PVGSHPLGQ 324
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 3 GTHPLAKK 10
GTHP A++
Sbjct: 235 GTHPTARR 242
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 TGTHPLAK 9
+GT+PL K
Sbjct: 57 SGTNPLHK 64
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 TGTHPLAK 9
+GT+PL K
Sbjct: 57 SGTNPLHK 64
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 TGTHPLAK 9
+GT+PL K
Sbjct: 57 SGTNPLHK 64
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PTGTHPLAKK 10
P G P A+K
Sbjct: 833 PEGMDPFAEK 842
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 PTGTHPLAKK 10
P G+HP ++
Sbjct: 259 PIGSHPRVER 268
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PTGTHPLAKK 10
P G P A+K
Sbjct: 833 PEGMDPFAEK 842
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 PTGTHPLAKK 10
P G+HP ++
Sbjct: 193 PIGSHPRTER 202
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 PTGTHPLAKK 10
P G+HP ++
Sbjct: 268 PIGSHPRTER 277
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 PTGTHPLAKK 10
P G+HP ++
Sbjct: 268 PIGSHPRTER 277
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 PTGTHPLAKK 10
P G+HP ++
Sbjct: 263 PIGSHPRTER 272
38|Sequence|186|195|PLAKKLPAQR
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 1 PLAKKLPAQR 10
PLA LPA +
Sbjct: 220 PLAHDLPAAQ 229
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 PLAKKLPAQR 10
PLA LP QR
Sbjct: 194 PLALLLPMQR 203
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 PLAKKLPAQR 10
PLA LP QR
Sbjct: 194 PLALLLPMQR 203
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 LAKKLPAQ 9
+ KKLPA+
Sbjct: 187 IKKKLPAK 194
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 LAKKLPAQ 9
+ KKLPA+
Sbjct: 187 IKKKLPAK 194
39|Sequence|191|200|LPAQRTNRAV
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 3 AQRTNRAV 10
A RTNRAV
Sbjct: 199 ATRTNRAV 206
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 1 LPAQRTNRAV 10
P QRT+R +
Sbjct: 78 FPTQRTSRTL 87
>sp|ORF1_HPBVH|UNCHARACTERIZED ORF1 protein|Human picobirnavirus (strain
Query: 4 QRTNRAV 10
+R+NRAV
Sbjct: 51 ERSNRAV 57
>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPAQRTNR 8
LP RT+R
Sbjct: 135 LPGSRTSR 142
40|Sequence|196|205|TNRAVALSSS
>sp|PAX_I77A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 TNRAVALSSS 10
+NR VAL +S
Sbjct: 236 SNRTVALRAS 245
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 1 TNRAVALSSS 10
+NRAVAL S
Sbjct: 198 SNRAVALKYS 207
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 TNRAVALSSS 10
TNR LSSS
Sbjct: 679 TNRTNFLSSS 688
41|Sequence|201|210|ALSSSVMCPD
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ALSSSVMCPD 10
A SSSV+C D
Sbjct: 408 AESSSVLCTD 417
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ALSSSVMCPD 10
A SSSV+C D
Sbjct: 408 AESSSVLCTD 417
>sp|PG114_VARV|CORE protein D2|Variola virus
Query: 2 LSSSVMCPD 10
L+SS++ PD
Sbjct: 14 LNSSILFPD 22
>sp|PG114_VAR67|CORE protein D2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LSSSVMCPD 10
L+SS++ PD
Sbjct: 14 LNSSILFPD 22
>sp|PG114_VACCC|CORE protein D2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LSSSVMCPD 10
L+SS++ PD
Sbjct: 14 LNSSILFPD 22
>sp|PG114_MONPV|CORE protein OPG114|Monkeypox virus (MPXV)
Query: 2 LSSSVMCPD 10
L+SS++ PD
Sbjct: 14 LNSSILFPD 22
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 SSSVMC 8
SSS+MC
Sbjct: 537 SSSIMC 542
42|Sequence|206|215|VMCPDARSRC
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 4 PDARSRC 10
PDARSRC
Sbjct: 638 PDARSRC 644
>sp|VE7_HPV5B|PROTEIN E7|Human papillomavirus type 5b
Query: 1 VMCPDARSRC 10
++CPD R C
Sbjct: 89 LLCPDCRGNC 98
>sp|VE7_HPV05|PROTEIN E7|Human papillomavirus 5
Query: 1 VMCPDARSRC 10
++CPD R C
Sbjct: 89 LLCPDCRGNC 98
>sp|VE7_HPV20|PROTEIN E7|Human papillomavirus 20
Query: 1 VMCPDARSRC 10
++CPD R C
Sbjct: 88 LLCPDCRGNC 97
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VMCPDARSR 9
VMC +AR R
Sbjct: 240 VMCDEARRR 248
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 VMCPD 5
+MCPD
Sbjct: 350 LMCPD 354
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 VMCPD 5
+MCPD
Sbjct: 350 LMCPD 354
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VMCPD 5
+MCPD
Sbjct: 350 LMCPD 354
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VMCPD 5
+MCPD
Sbjct: 350 LMCPD 354
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 VMCPD 5
+MCPD
Sbjct: 350 LMCPD 354
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 3 CPDARSR 9
CP+ +SR
Sbjct: 159 CPNCKSR 165
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 CPDAR 7
CPDA+
Sbjct: 936 CPDAK 940
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 CPDARSR 9
CP+ +SR
Sbjct: 159 CPNCKSR 165
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 1 VMCPDARSR 9
V CP RS+
Sbjct: 273 VSCPSGRSK 281
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 MCPDARSRC 10
+ P+ARSR
Sbjct: 987 LAPEARSRL 995
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 CPDARSR 9
CP+ +SR
Sbjct: 159 CPNCKSR 165
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CPDARSR 9
CP+ +SR
Sbjct: 159 CPNCKSR 165
>sp|VE7_HPV24|PROTEIN E7|Human papillomavirus 24
Query: 1 VMCPDARS 8
++CPD R+
Sbjct: 81 ILCPDCRN 88
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 MCPDARSRC 10
MC AR RC
Sbjct: 713 MCMCARRRC 721
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 MCPDARSRC 10
MC AR RC
Sbjct: 713 MCVCARRRC 721
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 MCPDARSRC 10
MC AR RC
Sbjct: 712 MCICARRRC 720
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 2 MCPDARSR 9
MC DA+ R
Sbjct: 495 MCIDAKHR 502
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 MCPDARSRC 10
MC AR RC
Sbjct: 712 MCICARRRC 720
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 MCPDARSRC 10
MC AR RC
Sbjct: 712 MCICARRRC 720
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 MCPDARSRC 10
MC R RC
Sbjct: 143 MCMTVRHRC 151
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 MCPDARSRC 10
MC AR++C
Sbjct: 711 MCVVARTKC 719
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 4 PDARSRC 10
P+A++RC
Sbjct: 642 PEAKARC 648
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 2 MCPDARSR 9
MC DA+ R
Sbjct: 496 MCIDAKHR 503
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 MCPDARSRC 10
MC AR RC
Sbjct: 713 MCMCARRRC 721
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 MCPDARSRC 10
MC R RC
Sbjct: 143 MCMTVRHRC 151
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 MCPDARSRC 10
MC R RC
Sbjct: 143 MCMTVRHRC 151
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 4 PDARSRC 10
P AR RC
Sbjct: 607 PSARPRC 613
43|Sequence|211|220|ARSRCPDGST
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RSRCPDGST 10
RSRC +G T
Sbjct: 1720 RSRCVNGET 1728
>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RCPDG 8
RCPDG
Sbjct: 57 RCPDG 61
>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RCPDG 8
RCPDG
Sbjct: 57 RCPDG 61
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 RSRCPDGST 10
+SRC +G T
Sbjct: 21 KSRCRNGET 29
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 RSRCPDGST 10
+SRC +G T
Sbjct: 21 KSRCRNGET 29
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RSRCPDGST 10
+SRC +G T
Sbjct: 21 KSRCRNGET 29
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 RSRCPDGST 10
+SRC +G T
Sbjct: 21 KSRCRNGET 29
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 RSRCPDGST 10
+SRC +G T
Sbjct: 21 KSRCRNGET 29
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 ARSRCPD 7
A +RCPD
Sbjct: 440 AATRCPD 446
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 ARSRCPD 7
A +RCPD
Sbjct: 442 AATRCPD 448
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 3 SRCPDGS 9
+RCPD S
Sbjct: 441 TRCPDKS 447
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 ARSRCPDG 8
AR RCP G
Sbjct: 609 ARPRCPPG 616
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 4 RCPDGST 10
RC DG+T
Sbjct: 185 RCKDGNT 191
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RSRCPDGST 10
+SRC +G T
Sbjct: 1720 KSRCVNGET 1728
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RSRCPDGST 10
+SRC +G T
Sbjct: 1720 KSRCVNGET 1728
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RSRCPDGST 10
+SRC +G T
Sbjct: 1720 KSRCVNGET 1728
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 ARSRCPD 7
A +RCPD
Sbjct: 442 AATRCPD 448
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RSRCPDGST 10
+SRC +G T
Sbjct: 1720 KSRCVNGET 1728
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 ARSRCPDGS 9
ARS+C D S
Sbjct: 131 ARSQCEDFS 139
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 ARSRCPDGS 9
ARS+C D S
Sbjct: 131 ARSQCEDFS 139
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 ARSRCPDGS 9
ARS+C D S
Sbjct: 131 ARSQCEDFS 139
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 428 ARCPKGET 435
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 428 ARCPKGET 435
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 427 ARCPKGET 434
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 428 ARCPKGET 435
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 427 ARCPKGET 434
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 427 ARCPKGET 434
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 ARSRCPDGST 10
A S+ PDG T
Sbjct: 429 AASQLPDGET 438
Query: 5 CPDGST 10
CP+GS+
Sbjct: 269 CPEGSS 274
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 CPDGST 10
CP+GS+
Sbjct: 269 CPEGSS 274
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 ARSRCP 6
R+RCP
Sbjct: 915 GRARCP 920
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 CPDGST 10
CP+GS+
Sbjct: 269 CPEGSS 274
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 CPDGST 10
CP+GS+
Sbjct: 269 CPEGSS 274
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 CPDGST 10
CP+GS+
Sbjct: 269 CPEGSS 274
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 3 SRCPD 7
+RCPD
Sbjct: 472 TRCPD 476
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 SRCPDGST 10
+RCP G T
Sbjct: 428 ARCPKGET 435
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 CPDGST 10
CP+GS+
Sbjct: 269 CPEGSS 274
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 CPDGST 10
CP+GS+
Sbjct: 269 CPEGSS 274
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 3 SRCPD 7
+RCPD
Sbjct: 451 TRCPD 455
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 3 SRCPD 7
+RCPD
Sbjct: 442 TRCPD 446
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 3 SRCPD 7
+RCPD
Sbjct: 443 TRCPD 447
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 3 SRCPD 7
+RCPD
Sbjct: 442 TRCPD 446
>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 RSRCPDGS 9
RS+ PDG+
Sbjct: 170 RSKYPDGT 177
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 3 SRCPD 7
+RCPD
Sbjct: 442 TRCPD 446
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CPDG 8
CPDG
Sbjct: 469 CPDG 472
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CPDG 8
CPDG
Sbjct: 469 CPDG 472
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CPDG 8
CPDG
Sbjct: 469 CPDG 472
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CPDG 8
CPDG
Sbjct: 469 CPDG 472
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CPDG 8
CPDG
Sbjct: 469 CPDG 472
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CPDG 8
CPDG
Sbjct: 469 CPDG 472
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 CPDG 8
CPDG
Sbjct: 469 CPDG 472
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 3 SRCPDG 8
SR PDG
Sbjct: 311 SRAPDG 316
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 SRCPDGST 10
++C DG T
Sbjct: 448 TKCRDGET 455
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ARSRCPDG 8
R RCP G
Sbjct: 547 VRPRCPPG 554
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 2 RSRCPDGS 9
R R PDG+
Sbjct: 286 RFRLPDGT 293
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 RSRCP 6
RS+CP
Sbjct: 1570 RSKCP 1574
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RSRCPDG 8
R RCP G
Sbjct: 479 RPRCPPG 485
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RCPDGS 9
RCP GS
Sbjct: 234 RCPTGS 239
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RCPDGS 9
RCP GS
Sbjct: 234 RCPTGS 239
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 3 SRCPD 7
+RCPD
Sbjct: 437 TRCPD 441
>sp|MB43_HHV11|MEMBRANE protein UL43|Human herpesvirus 1 (strain 17)
Query: 5 CPDGST 10
CP GST
Sbjct: 406 CPPGST 411
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 4 RCPDGS 9
R PDGS
Sbjct: 54 RSPDGS 59
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 5 CPDGS 9
CPDG
Sbjct: 215 CPDGE 219
44|Sequence|216|225|PDGSTCCELP
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 1 PDGSTCCELP 10
PDGS C P
Sbjct: 116 PDGSECLPPP 125
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 DGSTCCE 8
+ STCCE
Sbjct: 1108 NSSTCCE 1114
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PDGSTCCELP 10
PDGS C P
Sbjct: 116 PDGSECLPPP 125
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 PDGSTCCELP 10
PDGS C P
Sbjct: 116 PDGSECLPPP 125
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PDGSTCCELP 10
PDGS C P
Sbjct: 116 PDGSECLPPP 125
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 GSTCCELP 10
GS+CC P
Sbjct: 1376 GSSCCIRP 1383
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 GSTCCELP 10
GS+CC P
Sbjct: 1376 GSSCCIRP 1383
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 GSTCCELP 10
GS+CC P
Sbjct: 1376 GSSCCIRP 1383
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 4 STCCELP 10
+ CC LP
Sbjct: 1207 AACCSLP 1213
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 4 STCCELP 10
+ CC LP
Sbjct: 1207 AACCSLP 1213
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 PDGSTCCEL 9
PDGS C L
Sbjct: 839 PDGSACGRL 847
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2019 DGASCC 2024
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2016 DGASCC 2021
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2012 DGASCC 2017
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PDGSTCCELP 10
P GST LP
Sbjct: 970 PAGSTSVSLP 979
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PDGSTCCELP 10
P GST LP
Sbjct: 970 PAGSTSVSLP 979
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2039 DGASCC 2044
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 DGSTCCELP 10
+G TC E P
Sbjct: 1725 NGETCWEYP 1733
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 DGSTCCELP 10
+G TC E P
Sbjct: 1725 NGETCWEYP 1733
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2044 DGASCC 2049
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2038 DGASCC 2043
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2030 DGASCC 2035
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGSTCC 7
DG++CC
Sbjct: 2038 DGASCC 2043
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 DGSTCCELP 10
DGS C LP
Sbjct: 118 DGSECLPLP 126
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 2 DGSTCCELP 10
DGS C LP
Sbjct: 118 DGSECLPLP 126
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 DGSTCCELP 10
DGS C LP
Sbjct: 118 DGSECLPLP 126
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 DGSTCCELP 10
DGS C LP
Sbjct: 118 DGSECLPLP 126
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 2 DGSTCCELP 10
DGS C LP
Sbjct: 118 DGSECLPLP 126
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 DGSTCCELP 10
+G TC E P
Sbjct: 1725 NGETCWEHP 1733
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 DGSTCCELP 10
+G TC E P
Sbjct: 1725 NGETCWEHP 1733
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 DGSTCCELP 10
+G TC E P
Sbjct: 1725 NGETCWEHP 1733
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 DGSTCCELP 10
DGS C LP
Sbjct: 118 DGSECLPLP 126
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 DGSTCCELP 10
DGS C LP
Sbjct: 118 DGSECLPLP 126
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 DGSTCCELP 10
DGS C LP
Sbjct: 118 DGSECLPLP 126
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 2 DGSTCCE 8
+ S CCE
Sbjct: 122 NASQCCE 128
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 4 STCCELP 10
+TCC LP
Sbjct: 513 ATCCALP 519
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 4 STCCELP 10
+TCC LP
Sbjct: 513 ATCCALP 519
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 4 STCCEL 9
STCC L
Sbjct: 101 STCCVL 106
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PDGSTCCEL 9
P GS C L
Sbjct: 2040 PSGSPCTAL 2048
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PDGSTCCEL 9
P GS C L
Sbjct: 2039 PSGSPCTAL 2047
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PDGSTCCEL 9
P GS C L
Sbjct: 2039 PSGSPCTAL 2047
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PDGSTCCEL 9
P GS C L
Sbjct: 2040 PSGSPCTAL 2048
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PDGSTCCEL 9
P GS C L
Sbjct: 2039 PSGSPCTAL 2047
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PDGSTCCEL 9
P GS C L
Sbjct: 1873 PSGSPCTAL 1881
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PDGSTCCEL 9
P GS C L
Sbjct: 2039 PSGSPCTAL 2047
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PDGSTCCEL 9
P GS C L
Sbjct: 2039 PSGSPCTAL 2047
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PDGSTCCEL 9
P GS C L
Sbjct: 2037 PSGSPCTAL 2045
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PDGSTCCEL 9
P GS C L
Sbjct: 2039 PSGSPCTAL 2047
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GSTCC 7
G TCC
Sbjct: 476 GGTCC 480
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GSTCC 7
G TCC
Sbjct: 476 GGTCC 480
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 4 STCCEL 9
STCC L
Sbjct: 101 STCCVL 106
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 2 DGSTCC 7
DG+ CC
Sbjct: 527 DGNPCC 532
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 2 DGSTCC 7
DG+ CC
Sbjct: 531 DGNPCC 536
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 STCCEL 9
+TCC L
Sbjct: 5035 TTCCSL 5040
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PDGSTC 6
PDGS C
Sbjct: 116 PDGSEC 121
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 4 STCCELP 10
S CC LP
Sbjct: 497 SMCCALP 503
45|Sequence|221|230|CCELPSGKYG
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 CCELPSGKYG 10
CC P+G YG
Sbjct: 175 CCLRPTGIYG 184
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 CCELPSGKYG 10
CC P+G YG
Sbjct: 175 CCLRPTGIYG 184
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 1 CCELPSGKYG 10
CC P+G YG
Sbjct: 175 CCLRPTGIYG 184
>sp|3BHS_VAR67|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Variola
Query: 1 CCELPSGKYG 10
CC P+G YG
Sbjct: 57 CCLRPTGIYG 66
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 CCELPS 6
CC LPS
Sbjct: 499 CCALPS 504
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 CCELPSGKYG 10
CC L K+G
Sbjct: 1173 CCSLDHSKWG 1182
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 CCELPSGK 8
C +LPSG+
Sbjct: 1234 CIKLPSGQ 1241
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 1 CCELPS 6
CC LPS
Sbjct: 515 CCALPS 520
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 1 CCELPS 6
CC LPS
Sbjct: 515 CCALPS 520
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 3 ELPSGKYG 10
ELP GK G
Sbjct: 111 ELPGGKPG 118
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 CCELP 5
CC LP
Sbjct: 1209 CCSLP 1213
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 CCELP 5
CC LP
Sbjct: 1209 CCSLP 1213
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 3 ELPSGKYG 10
ELP GK G
Sbjct: 111 ELPGGKPG 118
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LPSGKYG 10
LPS +YG
Sbjct: 20 LPSQRYG 26
>sp|PHOSP_PIV5|PHOSPHOPROTEIN virus 5 (strain W3)
Query: 4 LPSGKY 9
LPSG Y
Sbjct: 122 LPSGSY 127
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CCELPS 6
CC LP+
Sbjct: 255 CCHLPT 260
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 CELPSG---KYG 10
C LP+G K+G
Sbjct: 2240 CHLPTGTRFKFG 2251
>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 CELPSG 7
CE P+G
Sbjct: 133 CEYPTG 138
>sp|VIF_HV1YF|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 CELPSG 7
CE P+G
Sbjct: 133 CEYPAG 138
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 CELPSG 7
CE P+G
Sbjct: 133 CEYPAG 138
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 CELPSG 7
CE P+G
Sbjct: 133 CEYPAG 138
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 CELPSG 7
C LP+G
Sbjct: 2316 CHLPTG 2321
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 CELPSG 7
C LP+G
Sbjct: 2277 CHLPTG 2282
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 CELPSG 7
C LP+G
Sbjct: 2232 CHLPTG 2237
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 CELPSG 7
C LP+G
Sbjct: 2316 CHLPTG 2321
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 CELPSG 7
C LP+G
Sbjct: 2317 CHLPTG 2322
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 CELPSG 7
C LP+G
Sbjct: 2277 CHLPTG 2282
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 3 ELPSGKYG 10
ELP YG
Sbjct: 128 ELPDSGYG 135
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 LPSGKYG 10
LP+G YG
Sbjct: 339 LPNGAYG 345
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 4 LPSGKY 9
LPSG Y
Sbjct: 254 LPSGNY 259
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CCELPSGKY 9
CC L G Y
Sbjct: 411 CCLLTIGHY 419
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 3 ELPSGKYG 10
ELP YG
Sbjct: 132 ELPDSGYG 139
46|Sequence|226|235|SGKYGCCPMP
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 KYGCCPM 9
KYG CPM
Sbjct: 416 KYGFCPM 422
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KYGCCPM 9
KYG CPM
Sbjct: 416 KYGFCPM 422
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 3 KYGCCPM 9
KYG CPM
Sbjct: 416 KYGFCPM 422
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SGKYGCCP 8
S +YGCCP
Sbjct: 102 SRRYGCCP 109
>sp|NS2_HRSVB|NON-STRUCTURAL protein 2|Human respiratory syncytial virus B
Query: 3 KYGCCPMP 10
KYG PMP
Sbjct: 87 KYGTFPMP 94
>sp|NS2_HRSVA|NON-STRUCTURAL protein 2|Human respiratory syncytial virus A
Query: 3 KYGCCPMP 10
KYG PMP
Sbjct: 87 KYGTFPMP 94
>sp|NS2_HRSV1|NON-STRUCTURAL protein 2|Human respiratory syncytial virus B
Query: 3 KYGCCPMP 10
KYG PMP
Sbjct: 87 KYGTFPMP 94
>sp|NS2_HRSV|NON-STRUCTURAL protein 2|Human respiratory syncytial virus
Query: 3 KYGCCPMP 10
KYG PMP
Sbjct: 87 KYGTFPMP 94
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 1 SGKYGCCP 8
S YGCCP
Sbjct: 102 SRGYGCCP 109
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 KYGCC 7
KYGCC
Sbjct: 4526 KYGCC 4530
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 YGCCPMP 10
Y CCP P
Sbjct: 62 YLCCPEP 68
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 YGCCPMP 10
Y CCP P
Sbjct: 62 YLCCPEP 68
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 GKYGCCP 8
G YGC P
Sbjct: 801 GMYGCSP 807
Query: 4 YGCCP 8
Y CCP
Sbjct: 694 YRCCP 698
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 5 GCCP 8
GCCP
Sbjct: 385 GCCP 388
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 5 GCCP 8
GCCP
Sbjct: 446 GCCP 449
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 5 GCCP 8
GCCP
Sbjct: 512 GCCP 515
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 GCCPMP 10
GC P+P
Sbjct: 1390 GCLPLP 1395
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SGKYGCCP 8
+G YGC P
Sbjct: 376 TGGYGCPP 383
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SGKYGCCP 8
SG+Y C P
Sbjct: 136 SGQYECRP 143
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SGKYGCCP 8
SG+Y C P
Sbjct: 136 SGQYECRP 143
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 KYGCCP 8
+YG CP
Sbjct: 786 EYGACP 791
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 KYGCCP 8
+YG CP
Sbjct: 786 EYGACP 791
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 YGCCP 8
YGC P
Sbjct: 219 YGCSP 223
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 YGCCP 8
YGC P
Sbjct: 219 YGCSP 223
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 KYGCCP 8
+YG CP
Sbjct: 786 EYGACP 791
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 4 YGCCP 8
YG CP
Sbjct: 302 YGACP 306
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 4 YGCCP 8
YG CP
Sbjct: 302 YGACP 306
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 4 YGCCP 8
YG CP
Sbjct: 302 YGACP 306
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 5 GCCP 8
GCCP
Sbjct: 119 GCCP 122
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 4 YGCCP 8
YG CP
Sbjct: 302 YGACP 306
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 3 KYGCCPMP 10
K G CP P
Sbjct: 465 KGGSCPKP 472
>sp|MATRX_ISFV|MATRIX protein|Isfahan virus (ISFV)
Query: 3 KYGCCP 8
+YGC P
Sbjct: 35 RYGCYP 40
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 4 YGCCP 8
YG CP
Sbjct: 319 YGACP 323
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 4 YGCCP 8
YG CP
Sbjct: 302 YGACP 306
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 4 YGCCP 8
YG CP
Sbjct: 318 YGACP 322
>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SGKYGC 6
SGK GC
Sbjct: 212 SGKMGC 217
>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SGKYGC 6
SGK GC
Sbjct: 212 SGKMGC 217
>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SGKYGC 6
SGK GC
Sbjct: 212 SGKMGC 217
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 3 KYGCCPMP 10
K G CP P
Sbjct: 465 KGGSCPKP 472
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 5 GCCP 8
GCCP
Sbjct: 120 GCCP 123
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 1 SGKYGC 6
SG+Y C
Sbjct: 216 SGRYNC 221
>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GKYGCCPMP 10
G Y C P P
Sbjct: 27 GAYICSPNP 35
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 SGKYGCCPMP 10
+G G C MP
Sbjct: 125 AGGLGPCTMP 134
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 KYGCCPMP 10
K G CP P
Sbjct: 1416 KRGICPRP 1423
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 KYGCCPMP 10
K G CP P
Sbjct: 1416 KRGICPRP 1423
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 1 SGKYGCCPM 9
+GK C P+
Sbjct: 57 AGKVSCIPI 65
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 SGKYGCCPM 9
+GK C P+
Sbjct: 57 AGKVSCIPI 65
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SGKYGCCPM 9
+GK C P+
Sbjct: 57 AGKVSCIPI 65
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 1 SGKYGC 6
SG+Y C
Sbjct: 219 SGRYDC 224
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 1 SGKYGC 6
SG+Y C
Sbjct: 219 SGRYDC 224
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 1 SGKYGC 6
SG+Y C
Sbjct: 216 SGRYDC 221
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 4 YGCCP 8
YG CP
Sbjct: 302 YGACP 306
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 1 SGKYGC 6
SG+Y C
Sbjct: 218 SGRYDC 223
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 SGKYGC 6
+G YGC
Sbjct: 6208 TGYYGC 6213
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 396 KFGRCPL 402
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 4 YGCCP 8
YG CP
Sbjct: 302 YGACP 306
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 402 KFGRCPL 408
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 396 KFGRCPL 402
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 409 KFGRCPL 415
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 SGKYGC 6
+G YGC
Sbjct: 6158 TGYYGC 6163
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 SGKYGC 6
+G YGC
Sbjct: 6178 TGYYGC 6183
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 402 KFGRCPL 408
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 396 KFGRCPL 402
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 SGKYGC 6
+G YGC
Sbjct: 6120 TGYYGC 6125
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 396 KFGRCPL 402
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 396 KFGRCPL 402
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 396 KFGRCPL 402
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 395 KFGRCPL 401
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 409 KFGRCPL 415
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 396 KFGRCPL 402
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 395 KFGRCPL 401
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 395 KFGRCPL 401
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 395 KFGRCPL 401
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 3 KYGCCPM 9
K+G CP+
Sbjct: 408 KFGRCPL 414
>sp|UL121_HCMVA|MEMBRANE protein UL121|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GKYGCCPMP 10
G Y C P P
Sbjct: 27 GTYICSPNP 35
47|Sequence|231|240|CCPMPNATCC
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1379 CCPVNFKKCC 1388
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1389 CCPVNFKKCC 1398
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1375 CCPVNFKKCC 1384
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1371 CCPVNFKKCC 1380
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1382 CCPVNFKRCC 1391
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1383 CCPVNFKRCC 1392
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1370 CCPVNFKKCC 1379
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1371 CCPVNFKRCC 1380
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 CCPMPNATCC 10
C PN+ CC
Sbjct: 328 CVVTPNSVCC 337
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1381 CCPVNFKRCC 1390
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1391 CCPVNFKRCC 1400
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 CCPMPNATCC 10
CCP+ CC
Sbjct: 1373 CCPVNFKRCC 1382
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 2 CPMPNAT 8
CPMP++T
Sbjct: 380 CPMPSST 386
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 CPMPNATCC 10
CPM CC
Sbjct: 226 CPMSLYLCC 234
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CPMPNATC 9
CPM A C
Sbjct: 60 CPMLRAYC 67
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CPMPNATC 9
CPM A C
Sbjct: 60 CPMLRAYC 67
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CPMPNATC 9
CPM A C
Sbjct: 60 CPMLRAYC 67
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 PMPNATCC 10
P+P T C
Sbjct: 440 PLPKKTTC 447
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 PMPNATC 9
PM NA C
Sbjct: 573 PMDNAEC 579
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 1 CCPMPNATCC 10
C MP T C
Sbjct: 334 CTFMPEGTVC 343
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 1 CCPMPNATCC 10
C MP T C
Sbjct: 334 CTFMPEGTVC 343
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 1 CCPMPNATCC 10
C MP T C
Sbjct: 334 CTFMPEGTVC 343
>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 CCPMPNATCC 10
C MP T C
Sbjct: 337 CTFMPEGTVC 346
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 1 CCPMPNATCC 10
C MP T C
Sbjct: 334 CTFMPEGTVC 343
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 1 CCPMPNATCC 10
C MP T C
Sbjct: 334 CTFMPEGTVC 343
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 1 CCPMPNATCC 10
C MP T C
Sbjct: 334 CTFMPEGTVC 343
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 CCPMPNATCC 10
C MP T C
Sbjct: 334 CTFMPEGTVC 343
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PMPNATCC 10
P P TCC
Sbjct: 440 PNPEFTCC 447
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 3 PMPNAT 8
P PNAT
Sbjct: 394 PSPNAT 399
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 3 PMPNAT 8
P PNAT
Sbjct: 379 PSPNAT 384
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CCPMPN 6
C P+PN
Sbjct: 804 CVPIPN 809
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CCPMPN 6
C P+PN
Sbjct: 804 CVPIPN 809
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 1 CCPMPNATCC 10
C MP T C
Sbjct: 334 CTFMPEGTVC 343
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 CCPMPNATCC 10
C MP T C
Sbjct: 334 CTFMPEGTVC 343
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 3 PMPNAT 8
P+PN T
Sbjct: 577 PLPNGT 582
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PMPNAT 8
P+PN T
Sbjct: 577 PLPNGT 582
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 1 CCPMPNATCC 10
CC N T C
Sbjct: 45 CCQYTNLTYC 54
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 CPMPNATCC 10
CP + CC
Sbjct: 446 CPTECSQCC 454
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 3 PMPNAT 8
P+PN T
Sbjct: 535 PLPNVT 540
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 CPMPNAT 8
CP PN T
Sbjct: 2079 CPSPNYT 2085
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CCPMPNA 7
CC P A
Sbjct: 134 CCKYPRA 140
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CCPMPNA 7
CC P A
Sbjct: 134 CCKYPRA 140
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PMPNAT 8
P+PNA+
Sbjct: 1896 PLPNAS 1901
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 PMPNAT 8
P+PNA+
Sbjct: 1896 PLPNAS 1901
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 CCPMPNATCC 10
CC N T C
Sbjct: 45 CCQHTNLTYC 54
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CCPMPNATC 9
P PNAT
Sbjct: 528 TTPTPNATS 536
Query: 1 CCPMPNATC 9
P PNAT
Sbjct: 549 TTPTPNATS 557
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 1 CCPMPNATC 9
P PNAT
Sbjct: 584 TTPTPNATS 592
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CCPMPNATC 9
P PNAT
Sbjct: 584 TTPTPNATS 592
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CCPMPNATC 9
P PNAT
Sbjct: 563 TTPTPNATS 571
Query: 1 CCPMPNATC 9
P PNAT
Sbjct: 584 TTPTPNATS 592
48|Sequence|236|245|NATCCSDHLH
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TCCSDHLH 10
T C+DH H
Sbjct: 1289 TSCTDHYH 1296
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TCCSDHLH 10
T C+DH H
Sbjct: 1289 TSCTDHYH 1296
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TCCSDHLH 10
T C+DH H
Sbjct: 1289 TSCTDHYH 1296
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TCCSDHLH 10
T C+DH H
Sbjct: 1289 TSCTDHYH 1296
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TCCSDHLH 10
T C+DH H
Sbjct: 1289 TSCTDHYH 1296
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 CCSDHLH 10
CC DH H
Sbjct: 230 CCRDHEH 236
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 NATCCSD 7
N TCC+D
Sbjct: 190 NKTCCND 196
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 NATCCSD 7
N TCC D
Sbjct: 191 NKTCCGD 197
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 CSDHLH 10
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 CSDHLH 10
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 NATCCSD 7
N TCC D
Sbjct: 188 NKTCCRD 194
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 1 NATCCSDHLH 10
++TC SDH+
Sbjct: 23 DSTCLSDHIQ 32
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 2 ATCCSDHL 9
A+CCS+ L
Sbjct: 972 ASCCSNSL 979
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 NATCCSDH 8
+A CSDH
Sbjct: 2098 DARVCSDH 2105
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 NATCCSDH 8
+A CSDH
Sbjct: 2098 DARVCSDH 2105
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 NATCCSDH 8
+A CSDH
Sbjct: 2094 DARVCSDH 2101
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 NATCCSD 7
+ TCCSD
Sbjct: 215 DKTCCSD 221
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3215 NVPFCSHHFH 3224
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3216 NVPFCSHHFH 3225
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3215 NVPFCSHHFH 3224
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3215 NVPFCSHHFH 3224
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3216 NVPFCSHHFH 3225
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3215 NVPFCSHHFH 3224
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3215 NVPFCSHHFH 3224
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 NATCCSDHLH 10
N CS H H
Sbjct: 3215 NVPFCSHHFH 3224
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 CCSDHLH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CCSDHLH 10
CC ++LH
Sbjct: 72 CCQEYLH 78
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 4 CCSDHLH 10
CC + LH
Sbjct: 299 CCDNFLH 305
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 CCSDHLH 10
CC + LH
Sbjct: 266 CCDNFLH 272
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CCSDHLH 10
CC + LH
Sbjct: 299 CCDNFLH 305
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 4 CCSDHLH 10
CC + LH
Sbjct: 299 CCDNFLH 305
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 4 CCSDHLH 10
CC + LH
Sbjct: 299 CCDNFLH 305
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 CCSDHLH 10
CC +H H
Sbjct: 230 CCREHEH 236
Query: 4 CCSDHL 9
CC DH+
Sbjct: 5353 CCYDHV 5358
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 NATCCSD 7
+ TCCSD
Sbjct: 219 DKTCCSD 225
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 4 CCSDHLH 10
CC ++LH
Sbjct: 72 CCQEYLH 78
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 1 NATCCSD 7
++TCC+D
Sbjct: 210 DSTCCND 216
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 3 TCCSD 7
TCC+D
Sbjct: 189 TCCND 193
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 CCSDHL 9
CC DH+
Sbjct: 5326 CCYDHV 5331
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 5 CSDHLH 10
C DH+H
Sbjct: 359 CEDHVH 364
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 CCSDHL 9
CC DH+
Sbjct: 5339 CCYDHV 5344
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 CCSDHLH 10
CC DH H
Sbjct: 230 CCRDHEH 236
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 NATCCSD 7
+ TCC D
Sbjct: 191 DKTCCKD 197
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CCSDHL 9
CC DH+
Sbjct: 5384 CCYDHV 5389
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CCSDHL 9
CC DH+
Sbjct: 5364 CCYDHV 5369
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CCSDHL 9
CC DH+
Sbjct: 5414 CCYDHV 5419
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CSDHLH 10
C +HLH
Sbjct: 367 CEEHLH 372
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 5 CSDHLH 10
C DH H
Sbjct: 362 CEDHAH 367
Query: 1 NATCCS 6
NAT CS
Sbjct: 374 NATACS 379
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CSDHLH 10
C +HLH
Sbjct: 367 CEEHLH 372
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 CSDHLH 10
C DH H
Sbjct: 363 CEDHAH 368
Query: 1 NATCCS 6
NAT CS
Sbjct: 375 NATACS 380
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3220 CSHHFH 3225
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3212 CSHHFH 3217
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3234 CSHHFH 3239
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 5 CSDHLH 10
CS H H
Sbjct: 3221 CSHHFH 3226
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 5 CSDHLH 10
CS H H
Sbjct: 3219 CSHHFH 3224
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3221 CSHHFH 3226
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3222 CSHHFH 3227
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3221 CSHHFH 3226
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3221 CSHHFH 3226
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3221 CSHHFH 3226
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3221 CSHHFH 3226
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3219 CSHHFH 3224
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3223 CSHHFH 3228
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3197 CSHHFH 3202
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3197 CSHHFH 3202
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3197 CSHHFH 3202
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3197 CSHHFH 3202
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3197 CSHHFH 3202
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3199 CSHHFH 3204
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3199 CSHHFH 3204
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3199 CSHHFH 3204
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3199 CSHHFH 3204
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3199 CSHHFH 3204
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3200 CSHHFH 3205
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3197 CSHHFH 3202
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3200 CSHHFH 3205
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3200 CSHHFH 3205
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 5 CSDHLH 10
CS H H
Sbjct: 3200 CSHHFH 3205
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3200 CSHHFH 3205
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3200 CSHHFH 3205
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3201 CSHHFH 3206
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3200 CSHHFH 3205
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 CSDHLH 10
CS H H
Sbjct: 3201 CSHHFH 3206
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3201 CSHHFH 3206
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 5 CSDHLH 10
CS H H
Sbjct: 3223 CSHHFH 3228
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 3 TCCSD 7
TCC+D
Sbjct: 190 TCCND 194
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 3 TCCSD 7
TCC D
Sbjct: 191 TCCKD 195
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 1 NATCCSD 7
++TCC D
Sbjct: 211 DSTCCHD 217
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 1 NATCCSDHL 9
NA+ C +H+
Sbjct: 449 NASGCPEHM 457
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 NATCCS 6
NAT CS
Sbjct: 426 NATACS 431
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 NATCCS 6
NAT CS
Sbjct: 426 NATACS 431
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 NATCCSDHL 9
NA+ C +H+
Sbjct: 449 NASGCPEHM 457
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 NATCC 5
N TCC
Sbjct: 282 NGTCC 286
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 3 TCCSD 7
TCC D
Sbjct: 191 TCCKD 195
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 3 TCCSD 7
TCC D
Sbjct: 187 TCCRD 191
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 NATCCSDH 8
+A C SDH
Sbjct: 917 SADCASDH 924
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 3 TCCSD 7
TCC D
Sbjct: 194 TCCRD 198
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 3 TCCSD 7
TCC D
Sbjct: 194 TCCRD 198
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 CSDHL 9
C DHL
Sbjct: 1555 CQDHL 1559
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 CSDHL 9
C DHL
Sbjct: 1555 CQDHL 1559
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 CSDHL 9
C DHL
Sbjct: 1555 CQDHL 1559
Query: 2 ATCCSDHLH 10
A C+D LH
Sbjct: 426 ALNCNDSLH 434
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 CSDHL 9
C DHL
Sbjct: 1555 CQDHL 1559
Query: 2 ATCCSDHLH 10
A C+D LH
Sbjct: 426 ALNCNDSLH 434
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 5 CSDHL 9
C DHL
Sbjct: 1555 CQDHL 1559
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 3 TCCSDH 8
TC S+H
Sbjct: 702 TCVSEH 707
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 TCCSDH 8
TC S+H
Sbjct: 702 TCVSEH 707
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 NATCCSDHL 9
N+T CS+ L
Sbjct: 447 NSTGCSERL 455
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 ATCCSD 7
A+CC D
Sbjct: 2046 ASCCLD 2051
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 5 CSDHL 9
C DHL
Sbjct: 1556 CQDHL 1560
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 ATCCSD 7
A+CC D
Sbjct: 2032 ASCCLD 2037
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 5 CSDHL 9
C DHL
Sbjct: 1555 CQDHL 1559
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 5 CSDHL 9
C DHL
Sbjct: 1551 CQDHL 1555
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 5 CSDHL 9
C DHL
Sbjct: 1559 CQDHL 1563
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 ATCCSD 7
A+CC D
Sbjct: 2040 ASCCLD 2045
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 ATCCSD 7
A+CC D
Sbjct: 2040 ASCCLD 2045
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 ATCCSD 7
A+CC D
Sbjct: 2021 ASCCLD 2026
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 ATCCSD 7
A+CC D
Sbjct: 2041 ASCCLD 2046
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 ATCCSD 7
A+CC D
Sbjct: 2018 ASCCLD 2023
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 5 CSDHL 9
C DHL
Sbjct: 1549 CQDHL 1553
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 CSDHL 9
C DHL
Sbjct: 1557 CQDHL 1561
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 CSDHL 9
C DHL
Sbjct: 1551 CQDHL 1555
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 5 CSDHL 9
C DHL
Sbjct: 1555 CQDHL 1559
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 5 CSDHL 9
C DHL
Sbjct: 1552 CQDHL 1556
49|Sequence|241|250|SDHLHCCPQD
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DHLHCCP 8
D L CCP
Sbjct: 181 DMLMCCP 187
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DHLHCCP 8
D L CCP
Sbjct: 181 DMLMCCP 187
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DHLHCCP 8
D L CCP
Sbjct: 181 DMLMCCP 187
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 SDHLHCCPQ 9
+ HL+ CP+
Sbjct: 1611 TKHLNACPR 1619
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SDHLHCC 7
S H++CC
Sbjct: 4678 SKHVNCC 4684
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DHLHCCPQ 9
+H H CP
Sbjct: 347 EHRHLCPH 354
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DHLHCCPQ 9
+H H CP
Sbjct: 347 EHRHLCPH 354
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 3 HLHC 6
HLHC
Sbjct: 296 HLHC 299
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)
Query: 3 HLHC 6
HLHC
Sbjct: 296 HLHC 299
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 LHCCPQD 10
LH CP D
Sbjct: 211 LHKCPWD 217
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 LHCCPQD 10
LH CP D
Sbjct: 211 LHKCPWD 217
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 LHCCPQD 10
LH CP D
Sbjct: 211 LHKCPWD 217
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 SDHLHC 6
S+HLHC
Sbjct: 111 SEHLHC 116
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SDHLHC 6
SDH+ C
Sbjct: 603 SDHIEC 608
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 SDHLH 5
SDHLH
Sbjct: 650 SDHLH 654
>sp|VU3_HHV7J|PROTEIN U3|Human herpesvirus 7 (strain JI)
Query: 4 LHCCPQD 10
L CCP++
Sbjct: 124 LVCCPEE 130
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 4 LHCCP 8
LH CP
Sbjct: 377 LHACP 381
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 SDHLHCC 7
S H+ CC
Sbjct: 4703 SKHVTCC 4709
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 4 LHCCP 8
L CCP
Sbjct: 2068 LDCCP 2072
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 SDHLHCCPQD 10
SD+L P D
Sbjct: 328 SDNLQAIPND 337
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 SDHLHCCPQD 10
SD+L P D
Sbjct: 328 SDNLQAIPND 337
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 5 HCCPQD 10
HC PQD
Sbjct: 555 HCPPQD 560
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 4 LHCC 7
LHCC
Sbjct: 211 LHCC 214
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 5 HCCPQD 10
HC PQD
Sbjct: 555 HCPPQD 560
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 4 LHCC 7
LHCC
Sbjct: 211 LHCC 214
50|Sequence|246|255|CCPQDTVCDL
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 CPQDTVCDL 10
CP+ TVC +
Sbjct: 1176 CPEGTVCSV 1184
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 CPQDTVCDL 10
CP+ TVC +
Sbjct: 1177 CPEGTVCSV 1185
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 CCPQDT 6
CC QD+
Sbjct: 1742 CCAQDS 1747
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 3 PQDTVCDL 10
P+DT C L
Sbjct: 306 PKDTFCSL 313
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 3 PQDTVCDL 10
PQ +CD+
Sbjct: 231 PQTDLCDM 238
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 3 PQDTVCDL 10
PQ +CD+
Sbjct: 231 PQTDLCDM 238
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 3 PQDTVCDL 10
PQ +CD+
Sbjct: 231 PQTDLCDM 238
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 3 PQDTVCDL 10
PQ +CD+
Sbjct: 231 PQTDLCDM 238
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 3 PQDTVCDL 10
PQ +CD+
Sbjct: 230 PQSELCDV 237
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 5 DTVCD 9
DT+CD
Sbjct: 1418 DTICD 1422
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 5 DTVCD 9
DT+CD
Sbjct: 1422 DTICD 1426
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 5 DTVCD 9
DT+CD
Sbjct: 1420 DTICD 1424
>sp|PG030_VARV|PROTEIN OPG030|Variola virus
Query: 5 DTVCDL 10
D+VCD+
Sbjct: 121 DSVCDI 126
>sp|PG030_VAR67|PROTEIN OPG030|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 DTVCDL 10
D+VCD+
Sbjct: 121 DSVCDI 126
>sp|PG030_VACCC|PROTEIN OPG030|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 DTVCDL 10
D+VCD+
Sbjct: 119 DSVCDI 124
>sp|PG030_MONPV|PROTEIN OPG030|Monkeypox virus (MPXV)
Query: 5 DTVCDL 10
D+VCD+
Sbjct: 123 DSVCDI 128
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 5 DTVCD 9
DT+CD
Sbjct: 1419 DTICD 1423
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 5 DTVCD 9
DT+CD
Sbjct: 1410 DTICD 1414
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 3 PQDTVCDL 10
P D C+L
Sbjct: 817 PDDNFCEL 824
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CPQDTVC 8
CP+ +C
Sbjct: 3301 CPRHVIC 3307
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CPQDTVC 8
CP+ +C
Sbjct: 3278 CPRHVIC 3284
51|Sequence|251|260|TVCDLIQSKC
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 TVCDLIQSKC 10
T C +Q++C
Sbjct: 830 TACKFVQTRC 839
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 TVCDLIQSKC 10
T C +Q++C
Sbjct: 830 TACKFVQTRC 839
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 TVCDLIQSKC 10
T C +Q++C
Sbjct: 830 TACKFVQTRC 839
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VCDLIQ 7
VCD+IQ
Sbjct: 116 VCDMIQ 121
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VCDLIQ 7
VCD+IQ
Sbjct: 116 VCDMIQ 121
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VCDLIQ 7
VCD+IQ
Sbjct: 116 VCDMIQ 121
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 4 DLIQSKC 10
D++QS C
Sbjct: 222 DIVQSTC 228
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 4 DLIQSKC 10
D++QS C
Sbjct: 257 DIVQSTC 263
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 4 DLIQSKC 10
D++QS C
Sbjct: 221 DIVQSTC 227
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 3 CDLIQSK 9
CD+IQ K
Sbjct: 275 CDMIQLK 281
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 3 CDLIQSK 9
CD+IQ K
Sbjct: 275 CDMIQLK 281
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 3 CDLIQSK 9
CD+IQ K
Sbjct: 275 CDMIQLK 281
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 CDLIQSKC 10
CD I ++C
Sbjct: 6197 CDAIMTRC 6204
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 CDLIQSKC 10
CD I ++C
Sbjct: 6174 CDAIMTRC 6181
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 TVCDLIQ 7
T+CD+I+
Sbjct: 102 TLCDMIK 108
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TVCDLIQ 7
T+CD+I+
Sbjct: 102 TLCDMIK 108
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TVCDLIQ 7
T+CD+I+
Sbjct: 102 TLCDMIK 108
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 1 TVCDLIQ 7
T+CD+I+
Sbjct: 102 TLCDMIK 108
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 VCDLIQ 7
+CD++Q
Sbjct: 771 ICDIVQ 776
52|Sequence|256|265|IQSKCLSKEN
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 IQSKCL 6
+QSKCL
Sbjct: 461 VQSKCL 466
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 IQSKCL 6
+QSKCL
Sbjct: 461 VQSKCL 466
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 IQSKCL 6
+QSKCL
Sbjct: 461 VQSKCL 466
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 IQSKCL 6
+QSKCL
Sbjct: 461 VQSKCL 466
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 1 IQSKCLSK 8
+ SKCLSK
Sbjct: 344 VPSKCLSK 351
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 1 IQSKCLSK 8
+ SKCLSK
Sbjct: 344 VPSKCLSK 351
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 SKCLSK 8
SKCLSK
Sbjct: 343 SKCLSK 348
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 IQSKCL 6
IQS+CL
Sbjct: 1351 IQSQCL 1356
53|Sequence|261|270|LSKENATTDL
>sp|VGF_VACCT|PRO-VACCINIA growth factor|Vaccinia virus (strain Tian Tan)
Query: 5 NATTDL 10
NATTD+
Sbjct: 34 NATTDI 39
>sp|VGF_VACCP|PRO-VACCINIA growth factor|Vaccinia virus (strain L-IVP) (VACV)
Query: 5 NATTDL 10
NATTD+
Sbjct: 34 NATTDI 39
>sp|VGF_VACCC|PRO-VACCINIA growth factor|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 NATTDL 10
NATTD+
Sbjct: 34 NATTDI 39
>sp|VGF_VACCA|PRO-VACCINIA growth factor|Vaccinia virus (strain Ankara) (VACV)
Query: 5 NATTDL 10
NATTD+
Sbjct: 34 NATTDI 39
>sp|VGF_MONPV|PRO-VIRAL epidermal growth factor|Monkeypox virus (MPXV)
Query: 5 NATTDL 10
NATTD+
Sbjct: 34 NATTDI 39
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 1 LSKENATTDL 10
+SKE+ TDL
Sbjct: 165 VSKEDRETDL 174
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LSKENATT 8
L+KE ATT
Sbjct: 349 LTKEGATT 356
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 LSKENATT 8
L+KE ATT
Sbjct: 349 LTKEGATT 356
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 LSKENATTDL 10
+S +NA+TD
Sbjct: 656 VSDDNASTDF 665
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 LSKENAT 7
LSK NAT
Sbjct: 474 LSKTNAT 480
54|Sequence|266|275|ATTDLLTKLP
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 TTDLLTKLP 10
TTD+L +LP
Sbjct: 1974 TTDILNQLP 1982
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 TTDLLTKLP 10
TTD+L +LP
Sbjct: 1974 TTDILNQLP 1982
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 TTDLLTKLP 10
TTD+L +LP
Sbjct: 1974 TTDILNQLP 1982
55|Sequence|271|280|LTKLPAHTVG
>sp|NS1_I71A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 1 LTKLPAHTV 9
L LP HT+
Sbjct: 163 LPSLPGHTI 171
>sp|NS1_I70A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 1 LTKLPAHTV 9
L LP HT+
Sbjct: 163 LPSLPGHTI 171
>sp|NS1_I69A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/England/878/1969
Query: 1 LTKLPAHTV 9
L LP HT+
Sbjct: 163 LPSLPGHTI 171
>sp|NS1_I68A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 1 LTKLPAHTV 9
L LP HT+
Sbjct: 163 LPSLPGHTI 171
>sp|NS1_I68A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 LTKLPAHTV 9
L LP HT+
Sbjct: 163 LPSLPGHTI 171
>sp|NS1_I68A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 1 LTKLPAHTV 9
L LP HT+
Sbjct: 163 LPSLPGHTI 171
>sp|NS1_I67A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 LTKLPAHTV 9
L LP HT+
Sbjct: 163 LPSLPGHTI 171
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 LTKLPAHTVG 10
+ K P+HT+G
Sbjct: 1770 IRKNPSHTMG 1779
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 LTKLPAHTV 9
LT+ P HT+
Sbjct: 238 LTRDPYHTI 246
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 PAHTVG 10
P+HT+G
Sbjct: 1861 PSHTMG 1866
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 LTKLPAHTV 9
TK+PA T+
Sbjct: 604 FTKIPAETL 612
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 LTKLPAHTV 9
TK+PA T+
Sbjct: 604 FTKIPAETL 612
>sp|NS1_I97A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I97A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I96A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I96A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I83A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I80AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/India/6263/1980
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I77AB|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I77AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I77A9|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/New
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I73A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I67A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I61A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I60A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ann
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I57A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I57A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I57A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I57A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I57A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I54A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I54A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/1/1954
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I51A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I50A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I47A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I45A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I43A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 157 LPSLPGHT 164
>sp|NS1_I40A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hickox/1940
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I36A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Henry/1936
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I35A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I34A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Puerto
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I24A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Japan/1924
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 160 LPSLPGHT 167
>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I06A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 154 LPSLPGHT 161
>sp|NS1_I03A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 158 LPSLPGHT 165
>sp|NS1_I03A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 158 LPSLPGHT 165
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 141 LPSLPGHT 148
>sp|NS1_I02A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 158 LPSLPGHT 165
>sp|NS1_I02A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 158 LPSLPGHT 165
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 158 LPSLPGHT 165
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 158 LPSLPGHT 165
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 158 LPSLPGHT 165
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 158 LPSLPGHT 165
>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 158 LPSLPGHT 165
>sp|NS1_I000X|NON-STRUCTURAL protein 1|Influenza A virus (strain A/X-31
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|NS1_I33A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 LTKLPAHT 8
L LP HT
Sbjct: 163 LPSLPGHT 170
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 LTKLPAHTV 9
TK+PA T+
Sbjct: 600 FTKVPAETL 608
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 2 TKLPAHT 8
TK+ AHT
Sbjct: 74 TKIEAHT 80
56|Sequence|276|285|AHTVGDVKCD
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 5 GDVKCD 10
GDV CD
Sbjct: 306 GDVACD 311
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 5 GDVKCD 10
GDV CD
Sbjct: 306 GDVACD 311
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 5 GDVKCD 10
GDV CD
Sbjct: 306 GDVACD 311
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 5 GDVKCD 10
GDV CD
Sbjct: 306 GDVACD 311
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 HTVGDVKC 9
H V DV C
Sbjct: 35 HVVADVAC 42
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HTVGDVKC 9
H V DV C
Sbjct: 35 HVVADVAC 42
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 4 VGDVKC 9
+GD+KC
Sbjct: 16 IGDLKC 21
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 HTVGDVK 8
HTV DVK
Sbjct: 2477 HTVTDVK 2483
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 HTVGDVK 8
HTV DVK
Sbjct: 2477 HTVTDVK 2483
>sp|NS1_I89A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/352/1989
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I83A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I80A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I78A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I78A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I77A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I77A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Alaska/6/1977
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I76A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I75A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I73A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Port
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I72A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I72A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I72A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I71A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I70A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I69A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/England/878/1969
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I68A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I68A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I68A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|NS1_I67A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 AHTVGDVK 8
HT+ DVK
Sbjct: 168 GHTIEDVK 175
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 HTVGDVKCD 10
+T G +KCD
Sbjct: 940 NTTGHLKCD 948
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 5 GDVKC 9
GD+KC
Sbjct: 274 GDLKC 278
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 AHTVGDVKCD 10
++ +GDV C+
Sbjct: 1909 SYRMGDVVCN 1918
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 2 HTVGDVK 8
HT GD K
Sbjct: 25 HTTGDWK 31
57|Sequence|281|290|DVKCDMEVSC
>sp|PG172_VARV|PROTEIN A43|Variola virus
Query: 1 DVKCDMEVSC 10
D++C + VSC
Sbjct: 109 DIQCSVNVSC 118
>sp|PG172_VAR67|PROTEIN A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DVKCDMEVSC 10
D++C + VSC
Sbjct: 109 DIQCSVNVSC 118
>sp|PG172_VACCC|PROTEIN A43|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DVKCDMEVSC 10
D++C + VSC
Sbjct: 108 DIQCSVNVSC 117
>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)
Query: 1 DVKCDMEVSC 10
D++C + VSC
Sbjct: 110 DIQCSVNVSC 119
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 4 CDMEVSC 10
CD+EV C
Sbjct: 272 CDIEVDC 278
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 4 CDMEVSC 10
CD+EV C
Sbjct: 272 CDIEVDC 278
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 VKCDMEVS 9
++CDME++
Sbjct: 681 IRCDMELT 688
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 766 KCDLEVT 772
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 748 KCDLEVT 754
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 748 KCDLEVT 754
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 748 KCDLEVT 754
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 748 KCDLEVT 754
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 748 KCDLEVT 754
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 KCDMEVS 9
KCD+EV+
Sbjct: 746 KCDLEVT 752
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 VKCDME 7
++CDME
Sbjct: 681 IRCDME 686
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 276 RCDTVVSC 283
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 274 RCDTVVSC 281
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 276 RCDTVVSC 283
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 274 RCDTVVSC 281
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 VKCDMEVS 9
+KCD+E +
Sbjct: 702 IKCDLEFT 709
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 275 RCDTIVSC 282
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 275 RCDTVVSC 282
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 275 RCDTVVSC 282
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 273 RCDTIVSC 280
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 3 KCDMEVSC 10
K DMEV C
Sbjct: 444 KIDMEVIC 451
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 3 KCDMEVSC 10
K DME SC
Sbjct: 390 KVDMEPSC 397
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 273 RCDTIVSC 280
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 275 RCDTIVSC 282
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 275 RCDTIVSC 282
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 276 RCDTIVSC 283
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 KCDMEVSC 10
+CD VSC
Sbjct: 275 RCDTIVSC 282
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 VKCDME 7
V CDME
Sbjct: 1902 VHCDME 1907
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 CDMEVSC 10
CD E++C
Sbjct: 1743 CDFEIAC 1749
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 CDMEVSC 10
CD E++C
Sbjct: 1743 CDFEIAC 1749
>sp|PG095_MONPV|ENTRY-FUSION complex associated protein OPG095|Monkeypox virus (MPXV)
Query: 3 KCDMEV 8
KCD+E+
Sbjct: 33 KCDIEI 38
>sp|PG095_VARV|ENTRY-FUSION complex associated protein OPG095|Variola virus
Query: 3 KCDMEV 8
KCD+E+
Sbjct: 33 KCDIEI 38
>sp|PG095_VAR67|ENTRY-FUSION complex associated protein OPG095|Variola virus (isolate
Query: 3 KCDMEV 8
KCD+E+
Sbjct: 33 KCDIEI 38
>sp|PG095_VACCC|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain
Query: 3 KCDMEV 8
KCD+E+
Sbjct: 33 KCDIEI 38
>sp|PG095_VACCA|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain Ankara)
Query: 3 KCDMEV 8
KCD+E+
Sbjct: 33 KCDIEI 38
>sp|U150A_HCMVM|UNCHARACTERIZED protein UL150A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 KCDMEVSC 10
+C ME++C
Sbjct: 257 RCSMEMAC 264
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 KCDMEVSC 10
K DME+ C
Sbjct: 446 KVDMEIMC 453
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 KCDMEVSC 10
+CD V+C
Sbjct: 28 RCDPRVAC 35
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 KCDMEVSC 10
+CD + C
Sbjct: 311 QCDTRIGC 318
58|Sequence|286|295|MEVSCPDGYT
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 MEVSCPDGY 9
ME+ CP+ Y
Sbjct: 449 MEIMCPNCY 457
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MEVSCPDG 8
+ V CPDG
Sbjct: 1131 VSVHCPDG 1138
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MEVSCPDG 8
+ V CPDG
Sbjct: 1131 VSVHCPDG 1138
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MEVSCPDG 8
+ V CPDG
Sbjct: 1131 VSVHCPDG 1138
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MEVSCPDG 8
+ V CPDG
Sbjct: 1131 VSVHCPDG 1138
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MEVSCPDG 8
+ V CPDG
Sbjct: 1131 VSVHCPDG 1138
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 4 SCPDGYT 10
+ PDGYT
Sbjct: 58 TLPDGYT 64
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 MEVSCPDGYT 10
+ V CP G T
Sbjct: 1131 ISVHCPKGIT 1140
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 1 MEVSCPDGY 9
M+ PDGY
Sbjct: 392 MDGEIPDGY 400
>sp|NS7A_SARS2|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 4 SCPDG 8
+CPDG
Sbjct: 66 ACPDG 70
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 2 EVSCPDG 8
+VSCP G
Sbjct: 272 KVSCPSG 278
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 SCPDGYT 10
SCP YT
Sbjct: 1925 SCPLDYT 1931
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 SCPDGYT 10
SCP YT
Sbjct: 1925 SCPLDYT 1931
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 3 VSCPDG 8
VSC DG
Sbjct: 370 VSCRDG 375
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 2 EVSCPDGYT 10
+++CPD T
Sbjct: 312 QLACPDTRT 320
>sp|SPIKE_ADE03|FIBER protein|Human adenovirus B serotype 3
Query: 6 PDGYT 10
PDG+T
Sbjct: 35 PDGFT 39
59|Sequence|291|300|PDGYTCCRLQ
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 PDGYTCCRL 9
PDG C RL
Sbjct: 839 PDGSACGRL 847
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 PDGYTCCRL 9
PDG C RL
Sbjct: 832 PDGPACGRL 840
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGYTCCRL 9
+G+ CC++
Sbjct: 310 EGFLCCKV 317
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGYTCCRL 9
+G+ CC++
Sbjct: 310 EGFLCCKV 317
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGYTCCRL 9
+G+ CC++
Sbjct: 310 EGFLCCKV 317
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DGYTCCRL 9
+G+ CC++
Sbjct: 310 EGFLCCKV 317
>sp|F_HCV1|F protein|Hepatitis C virus genotype 1a
Query: 4 YTCCR 8
+TCCR
Sbjct: 35 FTCCR 39
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 GYTCC 7
GY CC
Sbjct: 3764 GYCCC 3768
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GYTCC 7
GY CC
Sbjct: 3764 GYCCC 3768
>sp|F_HCV77|F protein|Hepatitis C virus genotype 1a
Query: 4 YTCCR 8
+TCCR
Sbjct: 35 FTCCR 39
>sp|NSP6_ROTHW|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 5 TCCR 8
TCCR
Sbjct: 32 TCCR 35
>sp|A40_VACCC|PROTEIN A40|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GYTCC 7
GY CC
Sbjct: 10 GYACC 14
>sp|NSP6_ROTH6|NON-STRUCTURAL protein 6|Rotavirus A (strain
Query: 5 TCCR 8
TCCR
Sbjct: 32 TCCR 35
>sp|NSP6_ROTHK|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 5 TCCR 8
TCCR
Sbjct: 32 TCCR 35
>sp|VE6_HPV47|PROTEIN E6|Human papillomavirus 47
Query: 4 YTCCRL 9
Y CCRL
Sbjct: 70 YACCRL 75
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 DGYTC 6
+GYTC
Sbjct: 491 NGYTC 495
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 2 DGYTC 6
+GYTC
Sbjct: 253 NGYTC 257
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 DGYTC 6
+GYTC
Sbjct: 491 NGYTC 495
>sp|NSP6_ROTHT|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 5 TCCR 8
TCCR
Sbjct: 32 TCCR 35
>sp|NSP6_ROTHL|NON-STRUCTURAL protein 6|Rotavirus A (strain
Query: 5 TCCR 8
TCCR
Sbjct: 32 TCCR 35
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 3 GYTCC 7
GY CC
Sbjct: 104 GYGCC 108
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 DGYTC 6
+GYTC
Sbjct: 482 NGYTC 486
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 TCCR 8
TCCR
Sbjct: 292 TCCR 295
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 5 TCCR 8
TCCR
Sbjct: 478 TCCR 481
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 5 TCCR 8
TCCR
Sbjct: 478 TCCR 481
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 5 TCCR 8
TCCR
Sbjct: 478 TCCR 481
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 5 TCCR 8
TCCR
Sbjct: 478 TCCR 481
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 5 TCCR 8
TCCR
Sbjct: 478 TCCR 481
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 5 TCCR 8
TCCR
Sbjct: 478 TCCR 481
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 5 TCCR 8
TCCR
Sbjct: 478 TCCR 481
>sp|NSP6_ROTAD|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 5 TCCR 8
TCCR
Sbjct: 32 TCCR 35
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DGYTC 6
DGY C
Sbjct: 2697 DGYIC 2701
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GYTCCR 8
G+TC R
Sbjct: 1019 GFTCLR 1024
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GYTCCR 8
G+TC R
Sbjct: 1019 GFTCLR 1024
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DGYTC 6
DGY C
Sbjct: 2697 DGYIC 2701
>sp|NSP6_ROTHP|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 5 TCCR 8
TCCR
Sbjct: 32 TCCR 35
60|Sequence|296|305|CCRLQSGAWG
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 CCRLQSGAWG 10
CC L WG
Sbjct: 1173 CCSLDHSKWG 1182
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 CRLQSGAWG 10
C LQ WG
Sbjct: 312 CELQWDTWG 320
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 1 CCRLQSGAW 9
CC L GAW
Sbjct: 192 CCALGPGAW 200
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 CCRLQSGAW 9
CC L GAW
Sbjct: 190 CCALGPGAW 198
>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate
Query: 1 CCRLQSGAW 9
C R+ S AW
Sbjct: 187 CHRISSEAW 195
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 CRLQSGAW 9
C L GAW
Sbjct: 2491 CHLMRGAW 2498
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CRLQSGA 8
CRL++GA
Sbjct: 82 CRLRNGA 88
>sp|NS12_CVHOC|NON-STRUCTURAL protein of 12.9 kDa|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CRLQSGAW 9
CR+ S AW
Sbjct: 39 CRVPSHAW 46
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 2 CRLQSGAW 9
C L+S W
Sbjct: 299 CALESSTW 306
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 2 CRLQSGAW 9
C L+S W
Sbjct: 299 CALESSTW 306
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CRLQSGAW 9
CR+ G W
Sbjct: 285 CRVTHGNW 292
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CRLQSGAW 9
CR+ G W
Sbjct: 285 CRVTHGNW 292
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 CRLQSGAWG 10
C L G W
Sbjct: 2493 CHLMRGGWA 2501
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CRLQSGA 8
CRL++GA
Sbjct: 82 CRLRNGA 88
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 CRLQSGAW 9
C L G W
Sbjct: 2496 CNLMRGGW 2503
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 CRLQSGAWG 10
CRLQS G
Sbjct: 1161 CRLQSCTHG 1169
61|Sequence|301|310|SGAWGCCPFT
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 5 GCCPF 9
GCCP+
Sbjct: 446 GCCPY 450
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 5 GCCPF 9
GCCP+
Sbjct: 512 GCCPY 516
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 5 GCCPF 9
GCCP+
Sbjct: 385 GCCPY 389
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 6 CCPFT 10
CCPF+
Sbjct: 696 CCPFS 700
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 6 CCPF 9
CCPF
Sbjct: 1361 CCPF 1364
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 6 CCPF 9
CCPF
Sbjct: 1368 CCPF 1371
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 6 CCPF 9
CCPF
Sbjct: 1368 CCPF 1371
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 6 CCPF 9
CCPF
Sbjct: 1364 CCPF 1367
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 GAWGCCP 8
G GCCP
Sbjct: 116 GIGGCCP 122
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 2 GAWGCCP 8
G GCCP
Sbjct: 117 GIGGCCP 123
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC-----CPFT 10
G WGC CP T
Sbjct: 588 GIWGCSGKLICPTT 601
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 6 CCPF 9
CCPF
Sbjct: 1376 CCPF 1379
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 GAWGC 6
G WGC
Sbjct: 78 GCWGC 82
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 2 GAWGC 6
G WGC
Sbjct: 77 GCWGC 81
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 GAWGCCPFT 10
G++GC P T
Sbjct: 1324 GSFGCKPLT 1332
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 AWGCCPF 9
+GC PF
Sbjct: 218 GYGCSPF 224
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 AWGCCPF 9
+GC PF
Sbjct: 218 GYGCSPF 224
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 GAWGC 6
G WGC
Sbjct: 1067 GIWGC 1071
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 2 GAWGCCPF 9
G W C P
Sbjct: 296 GGWSCHPL 303
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 1 SGAWGCCP 8
S +GCCP
Sbjct: 102 SRGYGCCP 109
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 586 GIWGC 590
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 WGCCPF 9
WG CP
Sbjct: 2492 WGFCPL 2497
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 581 GIWGC 585
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 589 GIWGC 593
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 590 GIWGC 594
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 596 GMWGC 600
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 597 GIWGC 601
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 580 GIWGC 584
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 581 GIWGC 585
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 585 GIWGC 589
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 600 GIWGC 604
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 593 GIWGC 597
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SGAWGCCP 8
S +GCCP
Sbjct: 102 SRRYGCCP 109
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 601 GIWGC 605
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 593 GIWGC 597
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 591 GIWGC 595
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 593 GIWGC 597
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 583 GIWGC 587
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 584 GLWGC 588
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 GAWGCCPFT 10
G+ GC P T
Sbjct: 1323 GSLGCKPLT 1331
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 570 GIWGC 574
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 586 GIWGC 590
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 605 GIWGC 609
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 GAWGCCPFT 10
G+ GC P T
Sbjct: 1324 GSLGCKPLT 1332
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 584 GIWGC 588
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 587 GIWGC 591
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 591 GIWGC 595
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 594 GIWGC 598
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 588 GIWGC 592
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 582 GIWGC 586
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 589 GIWGC 593
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC-----CP 8
G WGC CP
Sbjct: 594 GIWGCSGKIICP 605
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 594 GIWGC 598
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 603 GIWGC 607
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 594 GIWGC 598
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 591 GIWGC 595
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 580 GIWGC 584
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 585 GIWGC 589
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 590 GIWGC 594
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 592 GIWGC 596
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 594 GIWGC 598
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 594 GIWGC 598
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 594 GIWGC 598
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 599 GIWGC 603
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 595 GFWGC 599
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 5 GCCPFT 10
G CPF+
Sbjct: 548 GTCPFS 553
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 SGAWGCCPF 9
+ +WGC F
Sbjct: 1063 TSSWGCEEF 1071
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 SGAWGCCPF 9
+ +WGC F
Sbjct: 1063 TSSWGCEEF 1071
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 SGAWGCCPF 9
+ +WGC F
Sbjct: 1063 TSSWGCEEF 1071
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GAWGC 6
G WGC
Sbjct: 606 GFWGC 610
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 5 GCCPF 9
GCC F
Sbjct: 1141 GCCGF 1145
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 3 AWGCCP 8
+WGC P
Sbjct: 766 SWGCNP 771
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 AWGCCP 8
+WGC P
Sbjct: 762 SWGCNP 767
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 3 AWGCCP 8
+WGC P
Sbjct: 761 SWGCNP 766
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 3 AWGCCP 8
+WGC P
Sbjct: 762 SWGCNP 767
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 AWGCCP 8
+WGC P
Sbjct: 766 SWGCNP 771
>sp|ORF32_VZVO|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SGAWGCCP 8
+G W C P
Sbjct: 103 TGRWVCIP 110
>sp|ORF32_VZVD|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SGAWGCCP 8
+G W C P
Sbjct: 103 TGRWVCIP 110
62|Sequence|306|315|CCPFTQAVCC
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1379 CCPVNFKKCC 1388
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1383 CCPVNFKRCC 1392
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1389 CCPVNFKKCC 1398
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1382 CCPVNFKRCC 1391
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1375 CCPVNFKKCC 1384
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1371 CCPVNFKKCC 1380
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1370 CCPVNFKKCC 1379
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1384 CCPVNFKKCC 1393
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1381 CCPVNFKRCC 1390
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1371 CCPVNFKRCC 1380
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1381 CCPVNFKKCC 1390
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1391 CCPVNFKRCC 1400
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 CCPFTQAVCC 10
CCP CC
Sbjct: 1373 CCPVNFKRCC 1382
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 CPFTQAVCC 10
CP + +CC
Sbjct: 226 CPMSLYLCC 234
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CCPFTQAVC 9
C PF Q C
Sbjct: 603 CNPFAQPAC 611
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CCPFTQAVC 9
C PF Q C
Sbjct: 603 CNPFAQPAC 611
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CCPFTQAVC 9
C PF Q C
Sbjct: 603 CNPFAQPAC 611
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 CPFTQAVCC 10
C F + CC
Sbjct: 464 CEFCEGKCC 472
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 FTQAVC 9
FTQA+C
Sbjct: 464 FTQAIC 469
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 FTQAVC 9
FTQA+C
Sbjct: 464 FTQAIC 469
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CPFTQAVC 9
CP +A C
Sbjct: 60 CPMLRAYC 67
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CPFTQAVC 9
CP +A C
Sbjct: 60 CPMLRAYC 67
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CPFTQAVC 9
CP +A C
Sbjct: 60 CPMLRAYC 67
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 CCPFTQAVC 9
C P T VC
Sbjct: 256 CSPQTDNVC 264
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 CPFTQAVC 9
P+TQAV
Sbjct: 1028 VPYTQAVS 1035
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PFTQAVC 9
PF+ ++C
Sbjct: 578 PFSNSIC 584
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CPFTQAVCC 10
C F CC
Sbjct: 464 CEFCDGKCC 472
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 CPFTQAVCC 10
CP + CC
Sbjct: 446 CPTECSQCC 454
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 CPFTQAVCC 10
C F CC
Sbjct: 464 CEFCDGKCC 472
>sp|PG162_MONPV|PROTEIN OPG162|Monkeypox virus (MPXV)
Query: 2 CPFTQAVCC 10
C TQ+V C
Sbjct: 154 CKSTQSVLC 162
>sp|PG162_VAR67|PROTEIN OPG162|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CPFTQAVCC 10
C TQ+V C
Sbjct: 154 CKSTQSVLC 162
>sp|PG162_VACCC|PROTEIN OPG162|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CPFTQAVCC 10
C TQ+V C
Sbjct: 154 CKSTQSVLC 162
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 PFTQA 7
PFTQA
Sbjct: 1034 PFTQA 1038
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 4 FTQAVC 9
FT A+C
Sbjct: 528 FTSAIC 533
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 4 FTQAVC 9
FT A+C
Sbjct: 528 FTSAIC 533
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 4 FTQAVC 9
FT A+C
Sbjct: 528 FTSAIC 533
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 CPFTQA 7
PFTQA
Sbjct: 1030 TPFTQA 1035
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 4 FTQAVC 9
FT A+C
Sbjct: 518 FTSAIC 523
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 PFTQA 7
PFTQA
Sbjct: 1032 PFTQA 1036
63|Sequence|311|320|QAVCCEDHIH
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 CCEDHIH 10
CC DH H
Sbjct: 230 CCRDHEH 236
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 CCEDHIH 10
CC DH H
Sbjct: 230 CCRDHEH 236
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5330 CCYDHV 5335
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 5 CEDHIH 10
CEDH+H
Sbjct: 359 CEDHVH 364
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 5 CEDHIH 10
CEDH H
Sbjct: 362 CEDHAH 367
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 CEDHIH 10
CEDH H
Sbjct: 363 CEDHAH 368
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VCCEDHIH 10
VCC++++H
Sbjct: 71 VCCQEYLH 78
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 3 VCCEDHIH 10
VCC++++H
Sbjct: 71 VCCQEYLH 78
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5353 CCYDHV 5358
Query: 4 CCEDHIH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 3 VCCEDHIH 10
VCC HI+
Sbjct: 599 VCCVQHIN 606
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 CCEDHIH 10
CC +H H
Sbjct: 230 CCREHEH 236
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 3 VCCEDHIH 10
VCC HI+
Sbjct: 599 VCCVQHIN 606
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5339 CCYDHV 5344
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CEDHIH 10
CE+H+H
Sbjct: 367 CEEHLH 372
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CEDHIH 10
CE+H+H
Sbjct: 367 CEEHLH 372
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5326 CCYDHV 5331
Query: 5 CEDH 8
CEDH
Sbjct: 5369 CEDH 5372
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QAVCCEDHI 9
Q +CCE+ +
Sbjct: 81 QLICCEESL 89
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5364 CCYDHV 5369
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5384 CCYDHV 5389
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CCEDHI 9
CC DH+
Sbjct: 5414 CCYDHV 5419
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QAVCCEDHI 9
Q +CCE+ +
Sbjct: 81 QLICCEESL 89
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 QAVCCEDH 8
QA+ C+ H
Sbjct: 424 QAIACQKH 431
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QAVCCEDHI 9
+A+C +HI
Sbjct: 596 EAICIANHI 604
Query: 5 CEDHIH 10
C DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QAVCCEDHI 9
+A+C +HI
Sbjct: 596 EAICIANHI 604
Query: 5 CEDHIH 10
C DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QAVCCEDHI 9
+A+C +HI
Sbjct: 596 EAICIANHI 604
Query: 5 CEDHIH 10
C DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QAVCCEDHI 9
+A+C +HI
Sbjct: 596 EAICIANHI 604
Query: 5 CEDHIH 10
C DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QAVCCEDHI 9
+A+C +HI
Sbjct: 596 EAICIANHI 604
Query: 5 CEDHIH 10
C DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 CEDHIH 10
C DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 CEDHIH 10
C DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 AVCCEDHI 9
AVC +HI
Sbjct: 586 AVCIANHI 593
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 5 CEDH 8
CEDH
Sbjct: 1246 CEDH 1249
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 3 VCCEDHI 9
V CE+H+
Sbjct: 130 VLCEEHL 136
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 5 CEDH 8
CEDH
Sbjct: 1246 CEDH 1249
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 CEDH-IH 10
CEDH IH
Sbjct: 1226 CEDHAIH 1232
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 CEDH-IH 10
CEDH IH
Sbjct: 1226 CEDHAIH 1232
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 CEDH 8
CEDH
Sbjct: 1228 CEDH 1231
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 CEDH 8
CEDH
Sbjct: 1228 CEDH 1231
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 CEDH 8
CEDH
Sbjct: 1228 CEDH 1231
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 CEDH 8
CEDH
Sbjct: 1228 CEDH 1231
>sp|PG137_VARV|PROTEIN OPG137|Variola virus
Query: 3 VCCEDHI 9
VC ED I
Sbjct: 218 VCSEDEI 224
>sp|PG137_VAR67|PROTEIN OPG137|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 VCCEDHI 9
VC ED I
Sbjct: 218 VCSEDEI 224
>sp|PG137_VACCC|PROTEIN OPG137|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VCCEDHI 9
VC ED I
Sbjct: 217 VCSEDEI 223
>sp|PG137_VACCA|PROTEIN OPG137|Vaccinia virus (strain Ankara) (VACV)
Query: 3 VCCEDHI 9
VC ED I
Sbjct: 217 VCSEDEI 223
>sp|PG137_MONPV|PROTEIN OPG137|Monkeypox virus (MPXV)
Query: 3 VCCEDHI 9
VC ED I
Sbjct: 217 VCSEDEI 223
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 QAVCCEDHI 9
++VC +HI
Sbjct: 586 ESVCIANHI 594
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 5 CEDH 8
CEDH
Sbjct: 1231 CEDH 1234
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 CEDH-IH 10
CEDH IH
Sbjct: 1226 CEDHAIH 1232
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 3 VCCE 6
VCCE
Sbjct: 291 VCCE 294
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VCCE 6
VCCE
Sbjct: 291 VCCE 294
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 3 VCCE 6
VCCE
Sbjct: 291 VCCE 294
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 5 CEDH-IH 10
CEDH IH
Sbjct: 1226 CEDHAIH 1232
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 QAVCCEDHI 9
Q +C DH+
Sbjct: 533 QKICTGDHV 541
>sp|SODL_VACCU|CU-ZN superoxide dismutase-like protein OPG175|Vaccinia virus (strain
Query: 2 AVCCEDH 8
AVC DH
Sbjct: 2 AVCIIDH 8
>sp|PG176_VACCC|PROTEIN OPG176|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VCCEDHI 9
+CC+ I
Sbjct: 154 ICCDSRI 160
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 VCCEDHI 9
+CC H+
Sbjct: 773 ICCAWHV 779
>sp|SODL_CWPXB|CU-ZN superoxide dismutase-like protein OPG175|Cowpox virus (strain
Query: 2 AVCCEDH 8
AVC DH
Sbjct: 2 AVCIIDH 8
64|Sequence|316|325|EDHIHCCPAG
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 HIHCCPA 9
H++CC A
Sbjct: 4680 HVNCCTA 4686
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 1 EDHIH 5
EDHIH
Sbjct: 31 EDHIH 35
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 EDHIH 5
EDHIH
Sbjct: 31 EDHIH 35
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EDHIH 5
EDHIH
Sbjct: 31 EDHIH 35
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 EDHIH 5
EDHIH
Sbjct: 31 EDHIH 35
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 6 CCPAG 10
CCP G
Sbjct: 1640 CCPIG 1644
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 218 YCAPAG 223
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 229 YCAPAG 234
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 219 YCAPAG 224
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 218 YCAPAG 223
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 213 YCAPAG 218
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 214 YCAPAG 219
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 217 YCAPAG 222
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 208 YCAPAG 213
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 220 YCAPAG 225
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 213 YCAPAG 218
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 218 YCAPAG 223
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 211 YCAPAG 216
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 215 YCAPAG 220
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 217 YCAPAG 222
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 222 YCAPAG 227
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 215 YCAPAG 220
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 222 YCAPAG 227
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 218 YCAPAG 223
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 217 YCAPAG 222
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 215 YCAPAG 220
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 229 YCAPAG 234
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 217 YCAPAG 222
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 217 YCAPAG 222
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 214 YCAPAG 219
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 218 YCAPAG 223
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 222 YCAPAG 227
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 217 YCAPAG 222
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 217 YCAPAG 222
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 217 YCAPAG 222
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 213 YCAPAG 218
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 215 YCAPAG 220
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 225 YCAPAG 230
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 219 YCAPAG 224
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 219 YCAPAG 224
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 215 YCAPAG 220
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 210 YCAPAG 215
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DHIHCCP 8
+H H CP
Sbjct: 347 EHRHLCP 353
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DHIHCCP 8
+H H CP
Sbjct: 347 EHRHLCP 353
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 EDHIHCCPA 9
ED I+C A
Sbjct: 673 EDQIYCLDA 681
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 EDHIHCCPA 9
ED I+C A
Sbjct: 673 EDQIYCLDA 681
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 EDHIHCCPA 9
ED I+C A
Sbjct: 673 EDQIYCLDA 681
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 EDHIHCC 7
ED++ CC
Sbjct: 2417 EDNVVCC 2423
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|BHLF1_EBVB9|UNCHARACTERIZED protein BHLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DHIHCCPAG 10
DH H P G
Sbjct: 100 DHAHSNPTG 108
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DHIHC 6
DHI C
Sbjct: 604 DHIEC 608
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 2 DHIHCC 7
D+I CC
Sbjct: 320 DNIFCC 325
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 2 DHIHCC 7
D+I CC
Sbjct: 320 DNIFCC 325
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 212 YCAPAG 217
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 5 HCCPA 9
HC PA
Sbjct: 156 HCAPA 160
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 HIHCCP 8
H++ CP
Sbjct: 1613 HLNACP 1618
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 5 HCCPAG 10
+C PAG
Sbjct: 214 YCAPAG 219
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 IHCCPA 9
+HC PA
Sbjct: 162 LHCRPA 167
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 IHCCPA 9
+HC PA
Sbjct: 162 LHCRPA 167
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 EDHIHCCPAG 10
E H CP G
Sbjct: 564 ESHKKSCPHG 573
65|Sequence|321|330|CCPAGFTCDT
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CPAGFTCDT 10
CP GF+ DT
Sbjct: 2632 CPMGFSYDT 2640
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CPAGFTCDT 10
CP GF+ DT
Sbjct: 2632 CPMGFSYDT 2640
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CPAGFTCDT 10
CP GF+ DT
Sbjct: 2632 CPMGFSYDT 2640
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CPAGFTCDT 10
CP GF+ DT
Sbjct: 2632 CPMGFSYDT 2640
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 230 CAPAGF 235
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 220 CAPAGF 225
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 219 CAPAGF 224
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 214 CAPAGF 219
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 215 CAPAGF 220
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 221 CAPAGF 226
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 214 CAPAGF 219
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 219 CAPAGF 224
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 212 CAPAGF 217
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 216 CAPAGF 221
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 213 CAPAGF 218
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 223 CAPAGF 228
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 216 CAPAGF 221
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 223 CAPAGF 228
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 219 CAPAGF 224
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 216 CAPAGF 221
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 230 CAPAGF 235
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 219 CAPAGF 224
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 223 CAPAGF 228
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 218 CAPAGF 223
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 216 CAPAGF 221
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 226 CAPAGF 231
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 220 CAPAGF 225
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 211 CAPAGF 216
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 219 CAPAGF 224
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 220 CVPAGF 225
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 231 CTPAGF 236
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 223 CTPAGF 228
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 225 CTPAGF 230
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 221 CTPAGF 226
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CPAGFTCDT 10
CP GF DT
Sbjct: 2632 CPMGFAYDT 2640
>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 CPA---GFTCDT 10
CP GF CD+
Sbjct: 72 CPTLKKGFLCDS 83
>sp|VP30_EBORE|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 CPA---GFTCDT 10
CP GF CD+
Sbjct: 72 CPTLKKGFLCDS 83
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 1 CCPAGFTCDT 10
C P GFT +
Sbjct: 127 CVPPGFTSSS 136
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 CCPAGFTC 8
C PA TC
Sbjct: 93 CSPASSTC 100
>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 CPA---GFTCDT 10
CP GF CD+
Sbjct: 72 CPTLRKGFLCDS 83
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAG+
Sbjct: 209 CAPAGY 214
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAG+
Sbjct: 218 CAPAGY 223
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAG+
Sbjct: 220 CAPAGY 225
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAG+
Sbjct: 216 CAPAGY 221
>sp|VP30_EBOZM|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 CPA---GFTCDT 10
CP GF CD+
Sbjct: 72 CPTLKKGFLCDS 83
>sp|VP30_EBOZ5|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 CPA---GFTCDT 10
CP GF CD+
Sbjct: 72 CPTLKKGFLCDS 83
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAG+
Sbjct: 215 CAPAGY 220
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 PAGFTCDT 10
P+GF C +
Sbjct: 1578 PSGFPCTS 1585
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 PAGFTCDT 10
P+GF C +
Sbjct: 1579 PSGFPCTS 1586
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAG---FTCDT 10
C PAG F C++
Sbjct: 214 CAPAGYAIFKCNS 226
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 CPAGFTCD 9
CP CD
Sbjct: 566 CPLTLNCD 573
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 2 CPAGFTC 8
CP G TC
Sbjct: 286 CPWGNTC 292
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 CCPAGFT 7
CC GF+
Sbjct: 261 CCNEGFS 267
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 213 CAPAGF 218
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C P GF
Sbjct: 229 CTPTGF 234
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C P GF
Sbjct: 211 CAPPGF 216
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C P GF
Sbjct: 210 CAPPGF 215
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 GFTCDT 10
GFTC T
Sbjct: 446 GFTCIT 451
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 CPAGFT 7
CP G T
Sbjct: 1133 CPCGLT 1138
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 CCPAGF 6
C PAGF
Sbjct: 215 CAPAGF 220
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 CCPAGF 6
C P GF
Sbjct: 226 CAPPGF 231
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 CCPAGF 6
C P GF
Sbjct: 217 CAPPGF 222
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 CCPAGF 6
C P GF
Sbjct: 221 CAPPGF 226
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 CCPAGF 6
C P GF
Sbjct: 227 CAPPGF 232
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 CCPAGF 6
C P GF
Sbjct: 218 CAPPGF 223
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 CCPAGF 6
C P GF
Sbjct: 227 CAPPGF 232
66|Sequence|326|335|FTCDTQKGTC
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 TCDTQKGTC 10
TCD K TC
Sbjct: 333 TCDFLKATC 341
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 TCDTQKGTC 10
TCD K TC
Sbjct: 333 TCDFLKATC 341
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 TCDTQKGTC 10
TC Q TC
Sbjct: 460 TCGQQMRTC 468
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 CDTQKGT 9
CDT GT
Sbjct: 182 CDTTNGT 188
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 FTCDTQKGTC 10
+TC TC
Sbjct: 91 YTCSPASSTC 100
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 1 FTCDTQKGTC 10
+ +T+KG C
Sbjct: 194 LSTETEKGAC 203
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 FTCDTQKGTC 10
F D+Q+ TC
Sbjct: 206 FETDSQRVTC 215
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 FTCDTQKGTC 10
+ +T+KG C
Sbjct: 1778 YKANTRKGWC 1787
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 FTCDTQKGTC 10
+ +T+KG C
Sbjct: 1777 YKANTRKGWC 1786
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 FTCDTQKGTC 10
+ +T+KG C
Sbjct: 1777 YKANTRKGWC 1786
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 FTCDTQKGTC 10
+ +T+KG C
Sbjct: 1777 YKANTRKGWC 1786
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 FTCDTQKGTC 10
+ +T+KG C
Sbjct: 1775 YKANTRKGWC 1784
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 2 TCDTQKG 8
TC T KG
Sbjct: 295 TCQTPKG 301
67|Sequence|331|340|QKGTCEQGPH
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 QKGTCEQG 8
QKG C+ G
Sbjct: 144 QKGNCQSG 151
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 QKGTCEQG 8
QKG C+ G
Sbjct: 144 QKGNCQSG 151
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 5 CEQGP 9
CE+GP
Sbjct: 938 CEEGP 942
>sp|VB05_VACC8|TRUNCATED plaque-size/host range protein|Vaccinia virus (strain LC16m8)
Query: 4 TCEQGPH 10
TC+QG H
Sbjct: 47 TCDQGYH 53
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 QKGTCEQGPH 10
+ G C QG H
Sbjct: 1113 RSGFCGQGTH 1122
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 GTCEQGP 9
G C++GP
Sbjct: 153 GACKRGP 159
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 1 QKGTCEQGP 9
+ GTCE P
Sbjct: 145 ENGTCEPNP 153
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 1 QKGTCEQGP 9
+ GTCE P
Sbjct: 145 ENGTCEPNP 153
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 TCEQGPH 10
TC+QG H
Sbjct: 47 TCDQGYH 53
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 4 TCEQGPH 10
TC+QG H
Sbjct: 47 TCDQGYH 53
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 3 GTCEQGPH 10
GTCE P
Sbjct: 118 GTCETNPR 125
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 4 TCEQGPH 10
TC+QG H
Sbjct: 47 TCDQGYH 53
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 4 TCEQGPH 10
TC+QG H
Sbjct: 47 TCDQGYH 53
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 4 TCEQGPH 10
TC+QG H
Sbjct: 47 TCDQGYH 53
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 3 GTCEQGP 9
GTCE P
Sbjct: 129 GTCEPNP 135
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 3 GTCEQGPH 10
CE GP+
Sbjct: 480 AICESGPY 487
>sp|VE6_HPV47|PROTEIN E6|Human papillomavirus 47
Query: 2 KGTCEQGPH 10
KG C Q H
Sbjct: 143 KGVCRQCKH 151
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 3 GTCEQGPH 10
GTCE P
Sbjct: 120 GTCEPNPR 127
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 5 CEQGPH 10
CE PH
Sbjct: 944 CELSPH 949
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 TCEQGP 9
TC GP
Sbjct: 59 TCSDGP 64
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 1 QKGTCEQGP 9
Q GTC P
Sbjct: 212 QSGTCITDP 220
68|Sequence|336|345|EQGPHQVPWM
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 3 GPHQVPWM 10
GPHQ W+
Sbjct: 510 GPHQSEWL 517
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 5 HQVPWM 10
H++PW+
Sbjct: 1542 HEIPWI 1547
>sp|VPU_HV1BN|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 EQGPHQVPW 9
E G H PW
Sbjct: 69 EMGGHDAPW 77
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 2 QGPHQVP 8
+GP QVP
Sbjct: 299 KGPEQVP 305
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 1 EQGPHQVPWM 10
E GP VP++
Sbjct: 20 ETGPPTVPFL 29
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 EQGPH 5
EQGPH
Sbjct: 275 EQGPH 279
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 QGPHQVPW 9
+GP ++PW
Sbjct: 1380 KGPAKLPW 1387
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 1 EQGPHQVPWM 10
E GP VP++
Sbjct: 20 ETGPPTVPFL 29
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 5 HQVPWM 10
HQV W+
Sbjct: 1051 HQVGWL 1056
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 5 HQVPWM 10
HQV W+
Sbjct: 1051 HQVGWL 1056
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 5 HQVPWM 10
HQVP++
Sbjct: 621 HQVPFL 626
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 EQGPHQVPW 9
E GP +V W
Sbjct: 3397 ESGPGEVLW 3405
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 GPHQVP 8
PH+VP
Sbjct: 708 APHKVP 713
>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain
Query: 3 GPHQVPWM 10
G H +PW+
Sbjct: 306 GTHALPWI 313
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 GPHQVP 8
PH+VP
Sbjct: 708 APHKVP 713
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 GPHQVP 8
PH+VP
Sbjct: 708 APHKVP 713
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 GPHQVP 8
PH+VP
Sbjct: 708 APHKVP 713
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EQGPHQVP 8
EQ P Q P
Sbjct: 446 EQDPRQFP 453
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 QGPHQVPW 9
Q P +PW
Sbjct: 350 QSPCALPW 357
>sp|YVAP_VACCC|UNCHARACTERIZED 9.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GPHQVPWM 10
GP ++ W+
Sbjct: 24 GPSKIGWL 31
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 EQGPHQV 7
E GPH +
Sbjct: 287 ENGPHSL 293
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 EQGPHQV 7
E GPH +
Sbjct: 287 ENGPHSL 293
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 QGPHQVPW 9
Q P +PW
Sbjct: 352 QSPCALPW 359
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 QGPHQVPW 9
Q P +PW
Sbjct: 352 QSPCALPW 359
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 QGPHQVPW 9
Q P +PW
Sbjct: 350 QSPCALPW 357
>sp|PG142_MONPV|CORE protein OPG142|Monkeypox virus (MPXV)
Query: 5 HQVPWM 10
H++ WM
Sbjct: 67 HRIKWM 72
>sp|PG142_VARV|CORE protein OPG142|Variola virus
Query: 5 HQVPWM 10
H++ WM
Sbjct: 67 HRIKWM 72
>sp|PG142_VAR67|CORE protein OPG142|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 HQVPWM 10
H++ WM
Sbjct: 67 HRIKWM 72
>sp|PG142_VACCC|CORE protein OPG142|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 HQVPWM 10
H++ WM
Sbjct: 67 HRIKWM 72
>sp|PG142_VACCA|CORE protein OPG142|Vaccinia virus (strain Ankara) (VACV)
Query: 5 HQVPWM 10
H++ WM
Sbjct: 67 HRIKWM 72
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 PHQVP 8
PH+VP
Sbjct: 1778 PHRVP 1782
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 PHQVP 8
PH+VP
Sbjct: 1774 PHRVP 1778
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 PHQVP 8
PH+VP
Sbjct: 1778 PHRVP 1782
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 2 QGPHQVPWM 10
+G H V W+
Sbjct: 219 RGIHNVKWI 227
69|Sequence|341|350|QVPWMEKAPA
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 VPWMEKAP 9
+PWM AP
Sbjct: 259 LPWMNSAP 266
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EKA A
Sbjct: 164 PWVEKASA 171
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 QVPWMEKAP 9
Q+P +EK P
Sbjct: 1436 QIPLLEKIP 1444
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 QVPWMEKAP 9
Q+P +EK P
Sbjct: 1436 QIPLLEKIP 1444
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 QVPWMEKAP 9
Q+P +EK P
Sbjct: 1436 QIPLLEKIP 1444
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 654 PWVEKKSA 661
Query: 1 QVPWMEKAP 9
+VPW+ P
Sbjct: 417 RVPWISDTP 425
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
Query: 1 QVPWMEKAP 9
+VPW+ P
Sbjct: 417 RVPWISDTP 425
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 QVPWMEKAP 9
Q+P EKAP
Sbjct: 1923 QLPPKEKAP 1931
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 QVPWMEKAP 9
+VPW+ P
Sbjct: 417 RVPWISDTP 425
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 QVPWMEKAP 9
+VPW+ P
Sbjct: 417 RVPWISDTP 425
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 QVPWMEKAP 9
+VPW+ P
Sbjct: 417 RVPWISDTP 425
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
Query: 1 QVPWMEKAP 9
+VPW+ P
Sbjct: 417 RVPWISDTP 425
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
Query: 1 QVPWMEKAP 9
+VPW+ P
Sbjct: 417 RVPWISDTP 425
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
Query: 1 QVPWMEKAP 9
+VPW+ P
Sbjct: 417 RVPWISDTP 425
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
Query: 1 QVPWMEKAP 9
+VPW+ P
Sbjct: 417 RVPWISDTP 425
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 660 PWVEKESA 667
Query: 1 QVPWMEKAP 9
+VPW+ P
Sbjct: 417 RVPWISDTP 425
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 QVPWMEKA 8
+VPWM +
Sbjct: 1061 EVPWMTQG 1068
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 QVPWMEKAP 9
+VPW+ P
Sbjct: 396 RVPWISDTP 404
Query: 3 PWMEKAPA 10
PW+EK A
Sbjct: 639 PWVEKESA 646
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 2 VPWM 5
VPWM
Sbjct: 313 VPWM 316
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 VPWMEKAP 9
VPW+ K P
Sbjct: 90 VPWLMKKP 97
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QVPWMEKAPA 10
Q PW++ P+
Sbjct: 305 QTPWIDDNPS 314
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 VPWMEK 7
VPW +K
Sbjct: 937 VPWTKK 942
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 VPWMEK 7
VPW +K
Sbjct: 937 VPWTKK 942
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VPWMEK 7
VPW +K
Sbjct: 938 VPWTKK 943
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VPWMEK 7
VPW +K
Sbjct: 938 VPWTKK 943
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 VPWMEK 7
VPW +K
Sbjct: 938 VPWTKK 943
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 VPWMEKAP 9
+PW+ K P
Sbjct: 90 IPWLMKKP 97
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QVPWMEKAPA 10
QVP + APA
Sbjct: 220 QVPKLGNAPA 229
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QVPWMEKAPA 10
QVP + APA
Sbjct: 220 QVPKLGNAPA 229
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QVPWMEKAPA 10
QVP + APA
Sbjct: 220 QVPKLGNAPA 229
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 VPWMEKAP 9
VPW+ + P
Sbjct: 90 VPWLTQQP 97
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 WMEKAPA 10
W+EK P
Sbjct: 2691 WLEKRPG 2697
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 WMEKAPA 10
W+EK P
Sbjct: 2691 WLEKRPG 2697
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 2 VPWMEKAP 9
+ W EK P
Sbjct: 144 IRWTEKTP 151
70|Sequence|346|355|EKAPAHLSLP
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 KAPAHLSL 9
+AP HLS+
Sbjct: 5947 QAPTHLSV 5954
Query: 3 APAHLS 8
APAH+S
Sbjct: 6544 APAHIS 6549
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 KAPAHLSL 9
+AP HLS+
Sbjct: 5924 QAPTHLSV 5931
Query: 2 KAPAHLS 8
+APAH+S
Sbjct: 6520 EAPAHVS 6526
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 APAHLSLP 10
APA +S+P
Sbjct: 746 APARMSIP 753
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 EKAPAHLSL 9
EK P HL L
Sbjct: 709 EKIPFHLQL 717
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 EKAPAHLSL 9
EK P HL L
Sbjct: 709 EKIPFHLQL 717
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 EKAPAHLSL 9
EK P HL L
Sbjct: 709 EKIPFHLQL 717
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 APAHLSLP 10
APA +S+P
Sbjct: 745 APARMSIP 752
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 2 KAPAHLSLP 10
+AP L LP
Sbjct: 502 RAPQQLKLP 510
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 2 KAPAHLSLP 10
+AP L LP
Sbjct: 503 RAPQQLKLP 511
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 KAPAHLSLP 10
KAP H LP
Sbjct: 474 KAPKHEQLP 482
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 KAPAHLSLP 10
KAP H LP
Sbjct: 474 KAPKHEQLP 482
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 APAHLSLP 10
APA +S+P
Sbjct: 745 APARMSIP 752
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 APAHLSLP 10
APA +S+P
Sbjct: 748 APARMSIP 755
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PAHLSLP 10
P H++LP
Sbjct: 164 PTHVNLP 170
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 4 PAHLSLP 10
P H++LP
Sbjct: 164 PTHVNLP 170
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 2 KAPAHLSLP 10
KAP + LP
Sbjct: 512 KAPLQIKLP 520
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 EKAPAHLSLP 10
EKA LSLP
Sbjct: 927 EKARKTLSLP 936
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 2 KAPAHLSLP 10
+APAH S P
Sbjct: 63 EAPAHASSP 71
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 APAHLSLP 10
APA +S+P
Sbjct: 769 APARISVP 776
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 APAHLSLP 10
APA +S+P
Sbjct: 769 APARISVP 776
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 APAHLSLP 10
APA +S+P
Sbjct: 766 APARISVP 773
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 APAHLSLP 10
APA +S+P
Sbjct: 766 APARISVP 773
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 3 APAHLSLP 10
+P H +LP
Sbjct: 560 SPTHAALP 567
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 EKAPAHLSL 9
EK P HL +
Sbjct: 709 EKIPFHLQI 717
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 KAPAHLSL 9
K P HL+L
Sbjct: 2106 KLPQHLTL 2113
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 EKAPAHL 7
EKA AHL
Sbjct: 740 EKAMAHL 746
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 EKAPAHL 7
EKA AHL
Sbjct: 740 EKAMAHL 746
>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain
Query: 5 AHLSLP 10
AHLSLP
Sbjct: 194 AHLSLP 199
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 EKAPAHL 7
EKA AHL
Sbjct: 740 EKAMAHL 746
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 EKAPAHL 7
EKA AHL
Sbjct: 740 EKAMAHL 746
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 2 KAPAHLSLP 10
+APAH S P
Sbjct: 63 EAPAHASSP 71
>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)
Query: 5 AHLSLP 10
AHLSLP
Sbjct: 194 AHLSLP 199
>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain
Query: 5 AHLSLP 10
AHLSLP
Sbjct: 194 AHLSLP 199
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 5 AHLSLP 10
AHLSLP
Sbjct: 194 AHLSLP 199
71|Sequence|351|360|HLSLPDPQAL
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 LSLPDPQA 9
LSLP PQ+
Sbjct: 594 LSLPKPQS 601
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 HLSLPDP 7
H+ LPDP
Sbjct: 90 HVKLPDP 96
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 1 HLSLPDPQA 9
HL LP+ QA
Sbjct: 573 HLPLPERQA 581
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 HLSLPDP 7
H+ LPDP
Sbjct: 89 HVKLPDP 95
>sp|ORF23_TTVV6|PROBABLE protein VP2|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 HLSLPDPQA 9
LS PDP+A
Sbjct: 201 QLSTPDPRA 209
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 HLSLPDP 7
H+ LPDP
Sbjct: 183 HVKLPDP 189
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 2 LSLPDP 7
+SLPDP
Sbjct: 76 ISLPDP 81
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 1 HLSLPDPQ 8
HL+L DP+
Sbjct: 585 HLNLKDPE 592
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 3 SLPDPQAL 10
++PDP+AL
Sbjct: 165 AVPDPEAL 172
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 3 SLPDPQAL 10
++PDP+AL
Sbjct: 165 AVPDPEAL 172
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 3 SLPDPQAL 10
++PDP+AL
Sbjct: 165 AVPDPEAL 172
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HLSLPDPQA 9
HL LP P+
Sbjct: 58 HLDLPYPRG 66
>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 LSLPDPQA 9
L +PDP+A
Sbjct: 74 LYVPDPEA 81
>sp|PHOSP_VSIVM|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 LSLPDPQA 9
L +PDP+A
Sbjct: 74 LYVPDPEA 81
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HLSLPDPQA 9
HL LP P+
Sbjct: 58 HLDLPYPRG 66
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 2 LSLPDPQ 8
LPDPQ
Sbjct: 81 FGLPDPQ 87
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 2 LSLPDP 7
L LPDP
Sbjct: 76 LKLPDP 81
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 1 HLSLPDPQAL 10
H++ PD Q +
Sbjct: 249 HMATPDTQPI 258
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 2 LSLPDP 7
L LPDP
Sbjct: 76 LKLPDP 81
>sp|PHOSP_VSIVG|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 LSLPDPQA 9
L +PDP+A
Sbjct: 74 LYVPDPEA 81
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 1 HLSLPDPQAL 10
H++ PD Q +
Sbjct: 533 HMATPDTQPI 542
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 2 LSLPDP 7
L LPDP
Sbjct: 76 LKLPDP 81
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 508 NVPDPQ 513
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 508 NVPDPQ 513
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 508 NVPDPQ 513
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 508 NVPDPQ 513
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 508 NVPDPQ 513
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 508 NVPDPQ 513
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 508 NVPDPQ 513
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HLSLPDPQAL 10
H++ PD Q +
Sbjct: 533 HMATPDTQPI 542
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 2 LSLPDP 7
L LPDP
Sbjct: 76 LKLPDP 81
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 508 NVPDPQ 513
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 508 NVPDPQ 513
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 508 NVPDPQ 513
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 2 LSLPDP 7
L LPDP
Sbjct: 76 LKLPDP 81
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 LSLPDP 7
L LPDP
Sbjct: 76 LKLPDP 81
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 2 LSLPDP 7
L LPDP
Sbjct: 76 LKLPDP 81
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 2 LSLPDPQ 8
LPDPQ
Sbjct: 82 FGLPDPQ 88
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 LSLPDP 7
L LPDP
Sbjct: 105 LKLPDP 110
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 SLPDPQA 9
S+PDP+A
Sbjct: 140 SIPDPRA 146
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 3 SLPDPQA 9
S PDPQA
Sbjct: 248 SSPDPQA 254
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 2 LSLPDP 7
L LPDP
Sbjct: 76 LKLPDP 81
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 2 LSLPDP 7
+SLPDP
Sbjct: 75 ISLPDP 80
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 2 LSLPDP 7
+SLPDP
Sbjct: 75 VSLPDP 80
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 LSLPDP 7
L LPDP
Sbjct: 76 LKLPDP 81
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 LSLPDP 7
L LPDP
Sbjct: 76 LKLPDP 81
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 LSLPDP 7
L LPDP
Sbjct: 76 LKLPDP 81
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 508 NVPDPQ 513
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 487 NVPDPQ 492
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 3 SLPDPQA 9
+LPDP A
Sbjct: 401 ALPDPNA 407
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 SLPDPQ 8
++PDPQ
Sbjct: 18 NVPDPQ 23
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 HLSLPDPQAL 10
HL++ DP+ L
Sbjct: 407 HLNVMDPRIL 416
72|Sequence|356|365|DPQALKRDVP
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 DPQALKRDV 9
+P+A KRDV
Sbjct: 311 EPEAWKRDV 319
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 DPQALKRDV 9
+P+A KRDV
Sbjct: 311 EPEAWKRDV 319
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 DPQALKRDV 9
+P+A KRDV
Sbjct: 311 EPEAWKRDV 319
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 DPQALKRDV 9
+P+A KRDV
Sbjct: 311 EPEAWKRDV 319
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 DPQALKRDV 9
+P+A KRDV
Sbjct: 311 EPEAWKRDV 319
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 2 PQALKRDVP 10
P+ALKR P
Sbjct: 752 PKALKRIAP 760
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 391 DPSHWKRDCP 400
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 379 DPTHWKRDCP 388
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 385 DPTHWKRDCP 394
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 385 DPTHWKRDCP 394
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 385 DPTHWKRDCP 394
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 391 DPSHWKRDCP 400
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 385 DPTHWKRDCP 394
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 385 DPTHWKRDCP 394
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 379 DPTHWKRDCP 388
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 385 DPTHWKRDCP 394
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 385 DPTHWKRDCP 394
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 385 DPTHWKRDCP 394
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 379 DPTHWKRDCP 388
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 385 DPTHWKRDCP 394
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 385 DPTHWKRDCP 394
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 PQALKRDVP 10
PQA K VP
Sbjct: 138 PQAHKAQVP 146
>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare
Query: 1 DPQALKR 7
DPQ LK+
Sbjct: 174 DPQYLKK 180
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 DPQALKRDVP 10
DP KRD P
Sbjct: 391 DPSHWKRDCP 400
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 1 DPQALKR 7
DPQ LK+
Sbjct: 174 DPQYLKK 180
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 1 DPQALKR 7
DPQ LK+
Sbjct: 174 DPQYLKK 180
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 PQALKRDVP 10
PQA K VP
Sbjct: 138 PQAHKYQVP 146
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 PQALKRDVP 10
PQA K VP
Sbjct: 138 PQAHKAQVP 146
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 DPQALKR 7
DPQ L+R
Sbjct: 1948 DPQMLRR 1954
73|Sequence|361|370|KRDVPCDNVS
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 KRDVPCDNVS 10
K +VPC+N S
Sbjct: 146 KYEVPCENRS 155
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 KRDVPCDNVS 10
K +VPC+N S
Sbjct: 146 KYEVPCENRS 155
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC+NVS
Sbjct: 236 PCNNVS 241
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 RDVPCDN 8
+DV CDN
Sbjct: 176 KDVVCDN 182
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 233 PCSNVS 238
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 251 PCKNVS 256
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 236 PCKNVS 241
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 240 PCKNVS 245
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 229 PCKNVS 234
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 234 PCTNVS 239
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 238 PCTNVS 243
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 243 PCTNVS 248
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 238 PCTNVS 243
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 238 PCTNVS 243
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 249 PCTNVS 254
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 243 PCTNVS 248
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 245 PCKNVS 250
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 239 PCTNVS 244
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 DVPCDNVS 10
DV CDN +
Sbjct: 189 DVVCDNTT 196
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 238 PCTNVS 243
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 250 PCTNVS 255
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 238 PCTNVS 243
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 238 PCTNVS 243
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 241 PCTNVS 246
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 240 PCTNVS 245
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 236 PCTNVS 241
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 236 PCTNVS 241
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 238 PCTNVS 243
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 238 PCTNVS 243
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 239 PCTNVS 244
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 235 PCTNVS 240
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 235 PCHNVS 240
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 234 PCKNVS 239
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 240 PCTNVS 245
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 241 PCTNVS 246
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 246 PCTNVS 251
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 RDVPCDNVS 10
RDV CD +
Sbjct: 176 RDVVCDKTN 184
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 239 PCRNVS 244
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 2 RDVPCDNVS 10
R +PC NV+
Sbjct: 18 RKLPCVNVN 26
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KRDVPCDN 8
K+DV CD+
Sbjct: 669 KQDVFCDS 676
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KRDVPCDN 8
K+DV CD+
Sbjct: 949 KQDVFCDS 956
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KRDVPCDN 8
K+DV CD+
Sbjct: 949 KQDVFCDS 956
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KRDVPCDN 8
K+DV CD+
Sbjct: 949 KQDVFCDS 956
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KRDVPCDN 8
K+DV CD+
Sbjct: 949 KQDVFCDS 956
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KRDVPCD 7
K D+PC+
Sbjct: 462 KDDLPCE 468
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 DVPCDN 8
D PC N
Sbjct: 64 DTPCTN 69
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 235 PCKNVS 240
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 KRDVPCDN 8
K D+P DN
Sbjct: 1340 KPDLPMDN 1347
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 KRDVPCDN 8
K D+P DN
Sbjct: 1340 KPDLPMDN 1347
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DVPCDNV 9
DV C+NV
Sbjct: 337 DVGCENV 343
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 5 PCDNVS 10
PC NVS
Sbjct: 233 PCTNVS 238
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 1 KRDVPC 6
K+D PC
Sbjct: 176 KKDQPC 181
74|Sequence|366|375|CDNVSSCPSS
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 CDNVSSC 7
CD V SC
Sbjct: 275 CDTVVSC 281
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 CDNVSSC 7
CD V SC
Sbjct: 275 CDTVVSC 281
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 CDNVSSC 7
CD V SC
Sbjct: 277 CDTVVSC 283
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 CDNVSSC 7
CD V SC
Sbjct: 277 CDTVVSC 283
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DNVSSCPSS 10
DN SS P+S
Sbjct: 244 DNASSMPAS 252
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 DNVSSCPSS 10
DN SS P+S
Sbjct: 244 DNASSMPAS 252
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 2 DNVSSCPSS 10
DN SS P+S
Sbjct: 243 DNASSVPAS 251
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 3 NVSSCPSS 10
N+S CP +
Sbjct: 359 NISQCPRT 366
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 CDNVSSC 7
CD V SC
Sbjct: 276 CDTVVSC 282
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 CDNVSSC 7
CD + SC
Sbjct: 276 CDTIVSC 282
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 CDNVSSC 7
CD V SC
Sbjct: 276 CDTVVSC 282
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 CDNVSSC 7
CD + SC
Sbjct: 274 CDTIVSC 280
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 CDNVSSCPSS 10
CD S PSS
Sbjct: 2652 CDIGESSPSS 2661
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 CDNVSSCPSS 10
CD S PSS
Sbjct: 2652 CDIGESSPSS 2661
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 CDNVSSCPSS 10
CD S PSS
Sbjct: 2652 CDIGESSPSS 2661
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 2 DNVSSCPSS 10
DN CPSS
Sbjct: 21 DNDRPCPSS 29
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 CDNVSSC 7
CD + SC
Sbjct: 274 CDTIVSC 280
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DNVSSCPS 9
DNV S PS
Sbjct: 812 DNVLSLPS 819
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DNVSSCPS 9
DNV S PS
Sbjct: 812 DNVLSLPS 819
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 CDNVSSC 7
CD + SC
Sbjct: 277 CDTIVSC 283
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 CDNVSSC 7
CD + SC
Sbjct: 276 CDTIVSC 282
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 CDNVSSC 7
CD + SC
Sbjct: 276 CDTIVSC 282
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 CDNVSSC 7
CD + SC
Sbjct: 276 CDTIVSC 282
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 SSCPSS 10
SSCP+S
Sbjct: 666 SSCPAS 671
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 SSCPSS 10
SSCP+S
Sbjct: 666 SSCPAS 671
75|Sequence|371|380|SCPSSDTCCQ
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 3 PSSDTC 8
PSS+TC
Sbjct: 315 PSSETC 320
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 4 SSDTCCQ 10
++DTCC+
Sbjct: 289 ANDTCCR 295
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 CPSSD 6
CP+SD
Sbjct: 929 CPTSD 933
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 SCPSSDTC 8
SC S+TC
Sbjct: 17 SCKISNTC 24
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 1 SCPSSDTC 8
+CP +TC
Sbjct: 285 NCPWGNTC 292
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 SCPSSDTCCQ 10
SC S+DT Q
Sbjct: 4360 SCVSTDTTVQ 4369
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 SCPSSDTCCQ 10
SC S+DT Q
Sbjct: 4360 SCVSTDTTVQ 4369
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 CPSSDT 7
CP+ DT
Sbjct: 1577 CPTEDT 1582
76|Sequence|376|385|DTCCQLTSGE
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 DTCCQLTS 8
DTCC + S
Sbjct: 1638 DTCCSIDS 1645
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 DTCCQLTSGE 10
+T C+ TSGE
Sbjct: 1926 ETGCERTSGE 1935
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 CCQLT 7
CCQLT
Sbjct: 45 CCQLT 49
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 TCCQLTSGE 10
TCC L G+
Sbjct: 1364 TCCPLLCGK 1372
Query: 3 CCQLTSG 9
CC T+G
Sbjct: 896 CCDCTAG 902
>sp|NSP6_ROTH7|NON-STRUCTURAL protein 6|Rotavirus A (isolate RVA/Human/United
Query: 1 DTCCQ 5
+TCCQ
Sbjct: 31 NTCCQ 35
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 1 DTCCQ 5
D CCQ
Sbjct: 212 DDCCQ 216
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 QLTSGE 10
QLTSGE
Sbjct: 430 QLTSGE 435
>sp|NSP6_ROTHB|NON-STRUCTURAL protein 6|Rotavirus A (strain
Query: 1 DTCCQ 5
+TCCQ
Sbjct: 31 NTCCQ 35
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 QLTSGE 10
QLTSGE
Sbjct: 430 QLTSGE 435
>sp|NSP6_ROTHD|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 1 DTCCQ 5
+TCCQ
Sbjct: 31 NTCCQ 35
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 QLTSGE 10
QLTSGE
Sbjct: 430 QLTSGE 435
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TCCQLTS 8
TC QLTS
Sbjct: 338 TCSQLTS 344
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TCCQLTS 8
TC QLTS
Sbjct: 338 TCSQLTS 344
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TCCQLTS 8
TC QLTS
Sbjct: 338 TCSQLTS 344
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 CQLTSG 9
CQ TSG
Sbjct: 909 CQCTSG 914
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 DTCCQLT 7
+TCC L+
Sbjct: 5012 NTCCNLS 5018
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 CQLTSG 9
CQ TSG
Sbjct: 905 CQCTSG 910
>sp|YVIA_VACCC|UNCHARACTERIZED 9.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CQLTSG 9
CQ+T+G
Sbjct: 51 CQITNG 56
>sp|NSP6_ROT41|NON-STRUCTURAL protein 6|Rotavirus A (isolate
Query: 1 DTCCQ 5
+TCCQ
Sbjct: 31 NTCCQ 35
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 TCCQLTS 8
T CQ+TS
Sbjct: 734 TRCQMTS 740
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 DTCCQLTSGE 10
D C +LTS E
Sbjct: 4767 DNCYRLTSVE 4776
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 2 TCCQLTS 8
TCC L S
Sbjct: 514 TCCALPS 520
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 2 TCCQLTS 8
TCC L S
Sbjct: 514 TCCALPS 520
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 TCCQLT 7
TCC L+
Sbjct: 5036 TCCSLS 5041
>sp|VE2_HPV58|REGULATORY protein E2|Human papillomavirus 58
Query: 1 DTCCQLTSGE 10
+T C L +GE
Sbjct: 142 ETTCTLVAGE 151
77|Sequence|381|390|LTSGEWGCCP
>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 TSGEWGC 8
T EWGC
Sbjct: 11 TRNEWGC 17
>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LTSGEWGC 8
LTSG+ GC
Sbjct: 210 LTSGKMGC 217
>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LTSGEWGC 8
LTSG+ GC
Sbjct: 210 LTSGKMGC 217
>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LTSGEWGC 8
LTSG+ GC
Sbjct: 210 LTSGKMGC 217
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 TSGEWGCCP 10
T G +GC P
Sbjct: 799 TKGMYGCSP 807
>sp|M2_I07A0|MATRIX protein 2|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 5 EWGC 8
EWGC
Sbjct: 11 EWGC 14
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LTSGEWGCCP 10
L+SG++ C P
Sbjct: 134 LSSGQYECRP 143
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LTSGEWGCCP 10
L+SG++ C P
Sbjct: 134 LSSGQYECRP 143
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LTSGEWGCC 9
LTS GCC
Sbjct: 1330 LTSSMRGCC 1338
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 1 LTSGEWGCC 9
LTSGE+ C
Sbjct: 430 LTSGEYKQC 438
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 1 LTSGEWGCC 9
LTSGE+ C
Sbjct: 430 LTSGEYKQC 438
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LTSGEWGCC 9
LTSGE+ C
Sbjct: 430 LTSGEYKQC 438
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 1 LTSGEWGCC 9
LTSGE+ C
Sbjct: 430 LTSGEYKQC 438
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 1 LTSGEWGCC 9
LTSGE+ C
Sbjct: 430 LTSGEYKQC 438
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 LTSGEWGCC 9
LTSGE+ C
Sbjct: 430 LTSGEYKQC 438
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 LTSGEWGCC 9
LTSGE+ C
Sbjct: 430 LTSGEYKQC 438
>sp|M2_I96A3|MATRIX protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I00A1|MATRIX protein 2|Influenza A virus (strain A/New
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I18A0|MATRIX protein 2|Influenza A virus (strain A/Brevig
Query: 2 TSGEWGC 8
T EWGC
Sbjct: 11 TRNEWGC 17
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 5 EWGCCP 10
EW CP
Sbjct: 171 EWNMCP 176
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 LTSGEWG 7
L+SG WG
Sbjct: 951 LSSGSWG 957
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 5 EWGCCP 10
EW CP
Sbjct: 310 EWEACP 315
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 5 EWGCCP 10
EW CP
Sbjct: 172 EWNLCP 177
>sp|M2_I82A9|MATRIX protein 2|Influenza A virus (strain A/Philippines/2/1982
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I33A0|MATRIX protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 TSGEWGC 8
T EWGC
Sbjct: 11 TRSEWGC 17
>sp|M2_I77AB|MATRIX protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I77AA|MATRIX protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I45A0|MATRIX protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I81A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I80A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I79A0|MATRIX protein 2|Influenza A virus (strain A/Bangkok/1/1979
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I57A3|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I57A2|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I89A2|MATRIX protein 2|Influenza A virus (strain A/Beijing/353/1989
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I88A5|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I88A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I83A8|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I68A5|MATRIX protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I54A2|MATRIX protein 2|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I51A0|MATRIX protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I50A0|MATRIX protein 2|Influenza A virus (strain A/Fort
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I43A0|MATRIX protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I78A8|MATRIX protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I78A7|MATRIX protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I60A0|MATRIX protein 2|Influenza A virus (strain A/Ann
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I57A5|MATRIX protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I57A1|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 TSGEWGC 8
+ G WGC
Sbjct: 1065 SGGIWGC 1071
>sp|M2_I73A5|MATRIX protein 2|Influenza A virus (strain A/Port
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I72A8|MATRIX protein 2|Influenza A virus (strain A/Udorn/1972
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I72A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I72A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I72A2|MATRIX protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I71A1|MATRIX protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I70A0|MATRIX protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I68A6|MATRIX protein 2|Influenza A virus (strain A/Northern
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I68A4|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I68A0|MATRIX protein 2|Influenza A virus (strain A/Aichi/2/1968
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I96A2|MATRIX protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I37A0|MATRIX protein 2|Influenza A virus (strain A/Swine/29/1937
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I57A0|MATRIX protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I83A1|MATRIX protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I80AA|MATRIX protein 2|Influenza A virus (strain A/India/6263/1980
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I76A6|MATRIX protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I67A0|MATRIX protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|M2_I77A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 5 EWGC 8
EWGC
Sbjct: 14 EWGC 17
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 5 EWGCCP 10
E+G CP
Sbjct: 786 EYGACP 791
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 5 EWGCCP 10
E+G CP
Sbjct: 786 EYGACP 791
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 5 EWGCCP 10
E+G CP
Sbjct: 786 EYGACP 791
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 1 LTSGEW 6
T+GEW
Sbjct: 184 FTTGEW 189
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LTSGEW 6
T+GEW
Sbjct: 184 FTTGEW 189
>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b
Query: 2 TSGEW 6
T+GEW
Sbjct: 181 TTGEW 185
>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5
Query: 2 TSGEW 6
T+GEW
Sbjct: 181 TTGEW 185
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TSGEW 6
T+GEW
Sbjct: 185 TTGEW 189
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 2 TSGEW 6
T+GEW
Sbjct: 185 TTGEW 189
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 LTSGEWG 7
LT G WG
Sbjct: 40 LTEGWWG 46
>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 EWGCC 9
+W CC
Sbjct: 7 DWSCC 11
>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 EWGCC 9
+W CC
Sbjct: 7 DWSCC 11
>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 EWGCC 9
+W CC
Sbjct: 7 DWSCC 11
>sp|ORF32_VZVO|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LTSGEWGCCP 10
+ +G W C P
Sbjct: 101 IITGRWVCIP 110
>sp|ORF32_VZVD|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LTSGEWGCCP 10
+ +G W C P
Sbjct: 101 IITGRWVCIP 110
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 4 GEWGC 8
G+WGC
Sbjct: 131 GKWGC 135
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 581 GIWGC 585
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 4 GEWGC 8
G+WGC
Sbjct: 131 GKWGC 135
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 6 WGCCP 10
WG CP
Sbjct: 2492 WGFCP 2496
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 4 GEWGC 8
G+WGC
Sbjct: 131 GKWGC 135
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 584 GLWGC 588
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC-----CP 10
G WGC CP
Sbjct: 588 GIWGCSGKLICP 599
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 586 GIWGC 590
>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P
Query: 1 LTSGEWGCCP 10
L G+W CP
Sbjct: 19 LDRGKWDRCP 28
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 590 GIWGC 594
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 589 GIWGC 593
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 597 GIWGC 601
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 5 EWGCC 9
+WG C
Sbjct: 327 DWGLC 331
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 585 GIWGC 589
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 595 GFWGC 599
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 583 GIWGC 587
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 580 GIWGC 584
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 570 GIWGC 574
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 586 GIWGC 590
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 600 GIWGC 604
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 593 GIWGC 597
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 587 GIWGC 591
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 601 GIWGC 605
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 581 GIWGC 585
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 588 GIWGC 592
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 593 GIWGC 597
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEWGC 8
G WGC
Sbjct: 591 GIWGC 595
>sp|M2_I69A0|MATRIX protein 2|Influenza A virus (strain A/England/878/1969
Query: 4 GEWGC 8
EWGC
Sbjct: 13 NEWGC 17
78|Sequence|386|395|WGCCPIPEAV
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 GCCPIPE 8
CC +PE
Sbjct: 1208 ACCSLPE 1214
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 GCCPIPE 8
CC +PE
Sbjct: 1208 ACCSLPE 1214
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 WGCCPI 6
WG CP+
Sbjct: 2492 WGFCPL 2497
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GCCPIP 7
GC P+P
Sbjct: 1390 GCLPLP 1395
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 4 CPIPEA 9
CP PEA
Sbjct: 770 CPEPEA 775
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 4 CPIPEA 9
CP PEA
Sbjct: 770 CPEPEA 775
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 GCCP 5
GCCP
Sbjct: 119 GCCP 122
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 GCCP 5
GCCP
Sbjct: 385 GCCP 388
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 4 CPIPEA 9
CP PEA
Sbjct: 770 CPEPEA 775
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 4 CPIPEA 9
CP PEA
Sbjct: 770 CPEPEA 775
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 3 CCPIPEAV 10
CC + EAV
Sbjct: 70 CCKVYEAV 77
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 CCPIPEAV 10
CC + EAV
Sbjct: 70 CCKVYEAV 77
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CCPIPEAV 10
CC + EAV
Sbjct: 70 CCKVYEAV 77
>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)
Query: 3 CCPIPEAV 10
CC + EAV
Sbjct: 70 CCKVYEAV 77
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 1 WGCCP 5
+GCCP
Sbjct: 105 YGCCP 109
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 2 GCCP 5
GCCP
Sbjct: 120 GCCP 123
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 GCCP 5
GCCP
Sbjct: 512 GCCP 515
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 GCCP 5
GCCP
Sbjct: 446 GCCP 449
>sp|GL_VZVO|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Oka vaccine)
Query: 4 CPIPEAV 10
CP+PE +
Sbjct: 80 CPVPEVI 86
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 4 CPIPE 8
CP PE
Sbjct: 28 CPTPE 32
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 4 CPIPE 8
CP PE
Sbjct: 28 CPTPE 32
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 GCCPIPEA 9
G CP PE+
Sbjct: 1418 GICPRPES 1425
>sp|GL_VZVD|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 CPIPEAV 10
CP+PE +
Sbjct: 79 CPVPEVI 85
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 3 CCPIPEAV 10
CC P+AV
Sbjct: 111 CCTGPDAV 118
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 1 WGCCPIP 7
WG P+P
Sbjct: 573 WGGSPLP 579
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 GCCPIPEA 9
G CP PE+
Sbjct: 1418 GICPRPES 1425
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 GCCPIPEA 9
G C +PE+
Sbjct: 415 GSCDLPES 422
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 GCCPIPEA 9
G C +PE+
Sbjct: 415 GSCDLPES 422
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 GCCPIPEA 9
G C +PE+
Sbjct: 415 GSCDLPES 422
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 GCCPIPEA 9
G C +PE+
Sbjct: 415 GSCDLPES 422
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 3 CCPIPEAV 10
CC + EA+
Sbjct: 520 CCSLREAI 527
>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GCCPIPEAV 10
GC I EAV
Sbjct: 373 GCTCISEAV 381
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 2 GCCPIPEAV 10
GC I EAV
Sbjct: 376 GCTCISEAV 384
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WGCCP 5
+GCCP
Sbjct: 105 YGCCP 109
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 GCCPIPEA 9
G C +PE+
Sbjct: 416 GSCDLPES 423
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 GCCPIPEA 9
G C +PE+
Sbjct: 416 GSCDLPES 423
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CCPIP 7
CCP P
Sbjct: 64 CCPEP 68
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CCPIP 7
CCP P
Sbjct: 64 CCPEP 68
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 WGCCPI 6
+GCC +
Sbjct: 4527 YGCCDV 4532
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 1 WGCCPIPE 8
WG +PE
Sbjct: 113 WGDAHVPE 120
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 1 WGCCPIPE 8
WG +PE
Sbjct: 113 WGDAHVPE 120
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 4 CPIPEAV 10
CPI EAV
Sbjct: 872 CPIGEAV 878
79|Sequence|391|400|IPEAVCCSDH
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 6 CCSDH 10
CC DH
Sbjct: 230 CCRDH 234
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 CCSDH 10
CC DH
Sbjct: 230 CCRDH 234
Query: 6 CCSDH 10
CC DH
Sbjct: 5330 CCYDH 5334
Query: 2 PEAVCC 7
PE CC
Sbjct: 6105 PERTCC 6110
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 CCSDH 10
CC DH
Sbjct: 5353 CCYDH 5357
Query: 2 PEAVCC 7
PE CC
Sbjct: 6128 PERTCC 6133
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 6 CCSDH 10
CC DH
Sbjct: 5326 CCYDH 5330
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 6 CCSDH 10
CC DH
Sbjct: 5339 CCYDH 5343
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 6 CCSDH 10
CC DH
Sbjct: 5364 CCYDH 5368
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 6 CCSDH 10
CC DH
Sbjct: 5384 CCYDH 5388
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 6 CCSDH 10
CC DH
Sbjct: 5414 CCYDH 5418
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 IPEAVCCSD 9
+PE C D
Sbjct: 641 VPEVFTCQD 649
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IPEAVCCSD 9
+PE C D
Sbjct: 641 VPEVFTCQD 649
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 PEAVCC 7
PE CC
Sbjct: 408 PEGWCC 413
>sp|SODL_VARV|CU-ZN superoxide dismutase-like protein OPG175|Variola virus
Query: 4 AVCCSDH 10
AVC DH
Sbjct: 2 AVCIIDH 8
>sp|SODL_VAR67|CU-ZN superoxide dismutase-like protein OPG175|Variola virus (isolate
Query: 4 AVCCSDH 10
AVC DH
Sbjct: 2 AVCIIDH 8
>sp|SODL_VACCU|CU-ZN superoxide dismutase-like protein OPG175|Vaccinia virus (strain
Query: 4 AVCCSDH 10
AVC DH
Sbjct: 2 AVCIIDH 8
>sp|SODL_CWPXB|CU-ZN superoxide dismutase-like protein OPG175|Cowpox virus (strain
Query: 4 AVCCSDH 10
AVC DH
Sbjct: 2 AVCIIDH 8
>sp|SODL_MONPZ|CU-ZN superoxide dismutase-like protein|Monkeypox virus (strain
Query: 4 AVCCSDH 10
AVC DH
Sbjct: 2 AVCIIDH 8
>sp|SODL_MONPV|CU-ZN superoxide dismutase-like protein OPG175|Monkeypox virus (MPXV)
Query: 4 AVCCSDH 10
AVC DH
Sbjct: 2 AVCIIDH 8
>sp|SODL_VACCD|CU-ZN superoxide dismutase-like protein OPG175|Vaccinia virus (strain
Query: 4 AVCCSDH 10
AVC DH
Sbjct: 2 AVCIIDH 8
>sp|SODL_CWPXG|CU-ZN superoxide dismutase-like protein|Cowpox virus (strain GRI-90 /
Query: 4 AVCCSDH 10
AVC DH
Sbjct: 2 AVCIIDH 8
>sp|SODL_VACCT|CU-ZN superoxide dismutase-like protein|Vaccinia virus (strain Tian
Query: 4 AVCCSDH 10
AVC DH
Sbjct: 2 AVCIIDH 8
>sp|SODL_VACCC|CU-ZN superoxide dismutase-like protein OPG175|Vaccinia virus (strain
Query: 4 AVCCSDH 10
AVC DH
Sbjct: 2 AVCIIDH 8
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 PEAVCCSD 9
P+AVC D
Sbjct: 1019 PKAVCTGD 1026
>sp|SODL_VACCA|CU-ZN superoxide dismutase-like protein|Vaccinia virus (strain Ankara)
Query: 4 AVCCSDH 10
AVC DH
Sbjct: 2 AVCIIDH 8
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 PEAVCCSD 9
PE V C D
Sbjct: 219 PELVICFD 226
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 EAVCCS 8
+ VCCS
Sbjct: 165 QTVCCS 170
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 EAVCCS 8
+ VCCS
Sbjct: 165 QTVCCS 170
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 EAVCCS 8
+ VCCS
Sbjct: 165 QTVCCS 170
80|Sequence|396|405|CCSDHQHCCP
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CCSDHQH 7
CC DH+H
Sbjct: 230 CCRDHEH 236
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CCSDHQH 7
CC DH+H
Sbjct: 230 CCRDHEH 236
Query: 1 CCSDH 5
CC DH
Sbjct: 5330 CCYDH 5334
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CCSDHQH 7
CC +H+H
Sbjct: 230 CCREHEH 236
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CCSDHQH 7
CC +H+H
Sbjct: 230 CCREHEH 236
Query: 1 CCSDH 5
CC DH
Sbjct: 5353 CCYDH 5357
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 DHQHCCP 10
+H+H CP
Sbjct: 347 EHRHLCP 353
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DHQHCCP 10
+H+H CP
Sbjct: 347 EHRHLCP 353
>sp|VLTF1_VAR67|LATE transcription factor 1|Variola virus (isolate
Query: 1 CCSDHQH 7
C S HQH
Sbjct: 161 CISQHQH 167
>sp|VLTF1_VACCC|LATE transcription factor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CCSDHQH 7
C S HQH
Sbjct: 161 CISQHQH 167
>sp|VLTF1_VACCA|LATE transcription factor 1|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CCSDHQH 7
C S HQH
Sbjct: 161 CISQHQH 167
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CSDHQH 7
C+DH H
Sbjct: 1291 CTDHYH 1296
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2048 CCLDTASFCP 2057
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2034 CCLDTASFCP 2043
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2042 CCLDTASFCP 2051
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2042 CCLDTASFCP 2051
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2023 CCLDTATFCP 2032
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 2 CSDHQH 7
C DH H
Sbjct: 362 CEDHAH 367
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CSDHQH 7
C DH H
Sbjct: 363 CEDHAH 368
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2043 CCLDTATFCP 2052
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2020 CCLDTATFCP 2029
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 CCSDHQHCCP 10
CC D CP
Sbjct: 2016 CCLDTATFCP 2025
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 CSDHQHCC 9
C D + CC
Sbjct: 319 CRDQELCC 326
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 CSDHQHCC 9
C D + CC
Sbjct: 319 CRDQELCC 326
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CCSDHQHCCP 10
CC DH P
Sbjct: 5339 CCYDHVIATP 5348
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 5 HQHCC 9
HQH C
Sbjct: 76 HQHTC 80
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 SDHQHCCP 10
SDH CP
Sbjct: 74 SDHGVICP 81
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn
Query: 3 SDHQHCCP 10
SDH CP
Sbjct: 74 SDHGILCP 81
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CCSDH 5
CC DH
Sbjct: 5326 CCYDH 5330
Query: 2 CSDHQHCC 9
CS HQ C
Sbjct: 2433 CSKHQWNC 2440
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 CCSDHQHC 8
CC+ Q C
Sbjct: 417 CCAFRQRC 424
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CCSDH 5
CC DH
Sbjct: 5364 CCYDH 5368
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CCSDH 5
CC DH
Sbjct: 5384 CCYDH 5388
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CCSDH 5
CC DH
Sbjct: 5414 CCYDH 5418
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CCSDHQHC 8
CC+ Q C
Sbjct: 417 CCAFRQRC 424
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 4 DHQHC 8
+H+HC
Sbjct: 210 EHEHC 214
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CSDHQHCC 9
CS HQ C
Sbjct: 2433 CSKHQWNC 2440
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka
Query: 1 CCSDHQHC 8
CC + HC
Sbjct: 61 CCGELIHC 68
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 CCSDHQHC 8
CC + HC
Sbjct: 61 CCGELIHC 68
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 4 DHQHC 8
+H+HC
Sbjct: 210 EHEHC 214
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 CSDH 5
CSDH
Sbjct: 2102 CSDH 2105
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 CSDH 5
CSDH
Sbjct: 2102 CSDH 2105
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 CSDH 5
CSDH
Sbjct: 2098 CSDH 2101
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 5 HQHCC 9
HQH C
Sbjct: 79 HQHTC 83
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 5 HQHCC 9
HQH C
Sbjct: 79 HQHTC 83
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 CSDHQHCC 9
CS+ CC
Sbjct: 452 CSERLACC 459
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 2 CSDHQH 7
C DH H
Sbjct: 359 CEDHVH 364
>sp|NEC1_HHV6U|NUCLEAR egress protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 HQHCC 9
HQH C
Sbjct: 79 HQHTC 83
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 3 SDHQHCCP 10
++ QHC P
Sbjct: 61 AEKQHCGP 68
81|Sequence|401|410|QHCCPQGYTC
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
Query: 2 HCCPQG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
Query: 2 HCCPQG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
Query: 2 HCCPQG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
Query: 2 HCCPQG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
Query: 2 HCCPQG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
Query: 2 HCCPQG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CPQGYTC 10
CP G++C
Sbjct: 463 CPWGHSC 469
Query: 2 HCCPQG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QHCCPQGY 8
+C P GY
Sbjct: 216 HYCAPAGY 223
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QHCCPQGY 8
+C P GY
Sbjct: 218 HYCAPAGY 225
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QHCCPQGY 8
+C P GY
Sbjct: 214 HYCAPAGY 221
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 4 CPQGYTC 10
CP G TC
Sbjct: 286 CPWGNTC 292
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QHCCPQGY 8
+C P GY
Sbjct: 207 HYCAPAGY 214
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QHCCPQGY 8
+C P GY
Sbjct: 213 HYCAPAGY 220
>sp|PG053_VACCP|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 QHCCPQGYTC 10
QH P TC
Sbjct: 24 QHSIPTNVTC 33
>sp|PG053_VACCC|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QHCCPQGYTC 10
QH P TC
Sbjct: 24 QHSIPTNVTC 33
>sp|PG053_MONPV|EFC-ASSOCIATED protein OPG053|Monkeypox virus (MPXV)
Query: 1 QHCCPQGYTC 10
QH P TC
Sbjct: 24 QHSIPTNVTC 33
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 HCCPQGYT 9
H CP YT
Sbjct: 384 HSCPLLYT 391
>sp|PG053_VARV|EFC-ASSOCIATED protein OPG053|Variola virus
Query: 1 QHCCPQGYTC 10
QH P TC
Sbjct: 24 QHSIPTNVTC 33
>sp|PG053_VAR67|EFC-ASSOCIATED protein OPG053|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 QHCCPQGYTC 10
QH P TC
Sbjct: 24 QHSIPTNVTC 33
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QHCCPQGY 8
+C P GY
Sbjct: 216 HYCAPTGY 223
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QHCCPQGY 8
+C P GY
Sbjct: 212 HYCAPAGY 219
>sp|C_NIPAV|PROTEIN C|Nipah virus
Query: 1 QHCCP 5
Q CCP
Sbjct: 147 QRCCP 151
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 72 CSPNGYS 78
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 QHCCPQGY 8
++C P GY
Sbjct: 224 RYCAPPGY 231
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 CCPQGYT 9
CC +G++
Sbjct: 261 CCNEGFS 267
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 HCCPQGYT 9
+ C QG+T
Sbjct: 312 YVCKQGFT 319
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 HCCPQGYT 9
+ C QG+T
Sbjct: 384 YVCKQGFT 391
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 HCCPQGYT 9
+ C QG+T
Sbjct: 384 YVCKQGFT 391
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 HCCPQGYT 9
+ C QG+T
Sbjct: 384 YVCKQGFT 391
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 HCCPQGYT 9
+ C QG+T
Sbjct: 384 YVCKQGFT 391
>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 3 CCPQGYT 9
C P G+T
Sbjct: 127 CVPPGFT 133
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 CCPQGY 8
CC GY
Sbjct: 756 CCYNGY 761
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 CCPQGY 8
CC GY
Sbjct: 755 CCYNGY 760
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 CCPQGY 8
CC GY
Sbjct: 755 CCYNGY 760
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 3 CCPQGYT 9
C P GY+
Sbjct: 62 CGPNGYS 68
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 QHCCPQGY 8
++C P GY
Sbjct: 225 RYCAPPGY 232
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 HCCPQGYT 9
+ C QG+T
Sbjct: 384 YVCKQGFT 391
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 HCCPQGYT 9
+ C QG+T
Sbjct: 384 YVCKQGFT 391
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 HCCPQGYT 9
+ C QG+T
Sbjct: 384 YVCKQGFT 391
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 HCCPQGYT 9
+ C QG+T
Sbjct: 384 YVCKQGFT 391
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 HCCPQGYTC 10
H C Y C
Sbjct: 400 HLCESNYGC 408
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 QHCCPQGY 8
+ CCP +
Sbjct: 1377 EECCPVNF 1384
>sp|E4RF1_ADE02|EARLY 4 ORF1 protein|Human adenovirus C serotype 2
Query: 3 CCPQGY 8
C P GY
Sbjct: 54 CIPPGY 59
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 QHCCPQGY 8
+ CCP +
Sbjct: 1370 EECCPVNF 1377
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 QHCCPQGY 8
+ CCP +
Sbjct: 1389 EECCPVNF 1396
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 QHCCPQGY 8
+ CCP +
Sbjct: 1382 EECCPVNF 1389
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 QHCCPQGY 8
+ CCP +
Sbjct: 1368 EECCPVNF 1375
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 CCPQGYT 9
C P+G+T
Sbjct: 121 CNPKGWT 127
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 QHCCPQGY 8
++C P GY
Sbjct: 216 RYCAPPGY 223
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 CCPQGYT 9
C P+G+T
Sbjct: 121 CNPKGWT 127
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 1 QHCCPQGYTC 10
Q CP+ TC
Sbjct: 490 QSQCPRFNTC 499
82|Sequence|406|415|QGYTCVAEGQ
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 GYTCVA 7
GYTC+A
Sbjct: 492 GYTCIA 497
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 GYTCVA 7
GYTC+A
Sbjct: 492 GYTCIA 497
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 YTCVAEGQ 10
YTC AE Q
Sbjct: 2577 YTCAAERQ 2584
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 GYTCV 6
GYTC+
Sbjct: 483 GYTCI 487
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 GYTCVAEGQ 10
GY CV G+
Sbjct: 122 GYACVVGGR 130
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 GYTCVAEGQ 10
GY CV G+
Sbjct: 122 GYACVVGGR 130
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GYTCVAE 8
G+TC++E
Sbjct: 381 GHTCMSE 387
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 2 GYTCVAE 8
G+TC++E
Sbjct: 351 GHTCMSE 357
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GYTCVAEGQ 10
GY CV G+
Sbjct: 123 GYACVVGGR 131
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GYTCVAEGQ 10
GY CV G+
Sbjct: 124 GYACVVGGR 132
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYTCVAEGQ 10
G CVA GQ
Sbjct: 1434 GDGCVASGQ 1442
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QGYTCVAE 8
Q YTC E
Sbjct: 270 QNYTCRCE 277
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QGYTCVAE 8
Q YTC E
Sbjct: 270 QNYTCRCE 277
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QGYTCVAE 8
Q YTC E
Sbjct: 270 QNYTCRCE 277
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QGYTCVAE 8
Q YTC E
Sbjct: 270 QNYTCRCE 277
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYTCVAEGQ 10
G CVA GQ
Sbjct: 1434 GDGCVASGQ 1442
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 2 GYTCV 6
GYTC+
Sbjct: 254 GYTCL 258
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QGYTCVA 7
QG+ C+A
Sbjct: 388 QGFLCLA 394
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 GYTCVAEG 9
G+T VA+G
Sbjct: 783 GFTGVAQG 790
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 GYTCVAEG 9
G+T VA+G
Sbjct: 783 GFTGVAQG 790
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 4 TCVAEG 9
TC AEG
Sbjct: 359 TCTAEG 364
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 5 CVAEGQ 10
C+AEG+
Sbjct: 1947 CLAEGE 1952
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 5 CVAEGQ 10
C+AEG+
Sbjct: 1947 CLAEGE 1952
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 CVAEGQ 10
C+AEG+
Sbjct: 1947 CLAEGE 1952
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 CVAEGQ 10
C+AEG+
Sbjct: 1947 CLAEGE 1952
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 CVAEGQ 10
C+AEG+
Sbjct: 1947 CLAEGE 1952
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 2 GYTCVAEG 9
GYT + EG
Sbjct: 67 GYTPLGEG 74
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 QGYTCVAEGQ 10
GY CV G+
Sbjct: 137 NGYACVVGGK 146
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 QGYTCVAEGQ 10
GY CV G+
Sbjct: 137 NGYACVVGGK 146
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 QGYTCVAEGQ 10
GY CV G+
Sbjct: 137 NGYACVVGGK 146
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 QGYTCVAEGQ 10
GY CV G+
Sbjct: 136 NGYACVVGGK 145
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 QGYTCVAEGQ 10
GY CV G+
Sbjct: 137 NGYACVVGGK 146
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 GYTCVAE 8
GY C A+
Sbjct: 984 GYVCFAD 990
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 GYTCVAE 8
GY C A+
Sbjct: 985 GYVCFAD 991
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 QGYTCVAEGQ 10
GY CV G+
Sbjct: 123 NGYACVVGGR 132
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 QGYTCVAEGQ 10
GY CV G+
Sbjct: 136 NGYACVVGGK 145
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 QGYTCVAEGQ 10
GY CV G+
Sbjct: 123 NGYACVVGGR 132
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 GYTC 5
GYTC
Sbjct: 160 GYTC 163
>sp|VPX_HV2SB|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 QGYTCVAEGQ 10
+G TC EG
Sbjct: 85 KGCTCRGEGH 94
83|Sequence|411|420|VAEGQCQRGS
>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41
Query: 2 AEGQCQRGS 10
AEG+C+ GS
Sbjct: 186 AEGECELGS 194
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 AEGQCQRGS 10
+E CQRG+
Sbjct: 889 SEQDCQRGT 897
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 AEGQCQRGS 10
+E CQRG+
Sbjct: 889 SEQDCQRGT 897
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 AEGQCQRGS 10
+E CQRG+
Sbjct: 889 SEQDCQRGT 897
>sp|M21_HMPVC|PROTEIN M2-1|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 GQCQRGS 10
G+C RGS
Sbjct: 13 GKCNRGS 19
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 3 EGQCQR 8
EG CQR
Sbjct: 525 EGSCQR 530
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 VAEGQCQRG 9
+ EG C+ G
Sbjct: 941 IGEGHCEPG 949
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 AEGQCQRGS 10
A GQ RGS
Sbjct: 514 ASGQSNRGS 522
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 VAEGQCQRGS 10
V E CQRG+
Sbjct: 177 VGEVVCQRGT 186
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 VAEGQCQRGS 10
V G+C +GS
Sbjct: 201 VRYGRCTKGS 210
84|Sequence|416|425|CQRGSEIVAG
>sp|M21_HMPVC|PROTEIN M2-1|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 CQRGSE 6
C RGSE
Sbjct: 15 CNRGSE 20
>sp|REV_HV2SB|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 2 QRGSEIVAG 10
+RG E+V G
Sbjct: 125 ERGEELVGG 133
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 CQRGSE 6
C+RGS+
Sbjct: 155 CKRGSD 160
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 CQRGSE 6
C+RGS+
Sbjct: 139 CKRGSD 144
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 RGSEIV 8
RGSE+V
Sbjct: 622 RGSEVV 627
85|Sequence|421|430|EIVAGLEKMP
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 IVAGLEKMP 10
+VA L K+P
Sbjct: 689 VVASLSKLP 697
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 EIVAGLEK 8
E++ G+EK
Sbjct: 69 EVIQGMEK 76
>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 EIVAGLEKM 9
EIVA EK+
Sbjct: 216 EIVASSEKL 224
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 EIVAGLEKM 9
EIVA EK+
Sbjct: 216 EIVASSEKL 224
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 EIVAGLEKM 9
EIVA EK+
Sbjct: 216 EIVASSEKL 224
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 EIVAGLEKM 9
EIVA EK+
Sbjct: 216 EIVASSEKL 224
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 EIVAGLEKM 9
EIVA EK+
Sbjct: 216 EIVASSEKL 224
86|Sequence|426|435|LEKMPARRAS
>sp|VE7_HPV18|PROTEIN E7|Human papillomavirus type 18
Query: 2 EKMPARRA 9
+ +PARRA
Sbjct: 47 QHLPARRA 54
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 3 KMPARRA 9
K+P RRA
Sbjct: 391 KVPTRRA 397
>sp|VE4_HPV04|PROTEIN E4|Human papillomavirus 4
Query: 3 KMPARRA 9
K+P+RRA
Sbjct: 28 KLPSRRA 34
>sp|VE7_HPV45|PROTEIN E7|Human papillomavirus 45
Query: 3 KMPARRA 9
++PARRA
Sbjct: 49 QLPARRA 55
87|Sequence|431|440|ARRASLSHPR
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 ARRASLSHP 9
A+RA SHP
Sbjct: 6491 AKRAVRSHP 6499
88|Sequence|436|445|LSHPRDIGCD
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 HPRDIGCD 10
HP + CD
Sbjct: 4698 HPNTVDCD 4705
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 HPRDIGCD 10
HP + CD
Sbjct: 4718 HPNTVDCD 4725
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 HPRDIGCD 10
HP + CD
Sbjct: 4748 HPNTVDCD 4755
>sp|US15_HCMVM|MEMBRANE protein US15|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SHPRDIG 8
SHP +IG
Sbjct: 103 SHPSNIG 109
>sp|US15_HCMVA|UNCHARACTERIZED protein HVLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SHPRDIG 8
SHP +IG
Sbjct: 103 SHPSNIG 109
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 LSHPRDI 7
LSHP D+
Sbjct: 1661 LSHPTDL 1667
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 2 SHPRDI 7
SHP+D+
Sbjct: 101 SHPQDL 106
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 SHPRDI 7
SHP+D+
Sbjct: 101 SHPQDL 106
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 SHPRDIGC 9
S P DI C
Sbjct: 179 SEPDDIDC 186
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 LSHPRDIG 8
L PR+IG
Sbjct: 2114 LDSPREIG 2121
>sp|PRO_ADE41|PROTEASE adenovirus F serotype 41
Query: 5 RDIGC 9
RD+GC
Sbjct: 13 RDLGC 17
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 SHPRDIGCD 10
+HP D G D
Sbjct: 216 THPGDRGID 224
>sp|PRO_ADE12|PROTEASE adenovirus A serotype 12
Query: 5 RDIGC 9
RD+GC
Sbjct: 13 RDLGC 17
>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4
Query: 5 RDIGC 9
RD+GC
Sbjct: 15 RDLGC 19
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 HPRDIGCD 10
+ RD+ CD
Sbjct: 174 YSRDVVCD 181
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 4 PRDIGCD 10
PR I CD
Sbjct: 980 PRQIYCD 986
>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3
Query: 5 RDIGC 9
RD+GC
Sbjct: 19 RDLGC 23
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 SHPRDI 7
SHPR I
Sbjct: 471 SHPRTI 476
>sp|PRO_ADE17|PROTEASE adenovirus D serotype 17
Query: 5 RDIGC 9
RD+GC
Sbjct: 14 RDLGC 18
>sp|PRO_ADE09|PROTEASE adenovirus D serotype 9
Query: 5 RDIGC 9
RD+GC
Sbjct: 14 RDLGC 18
89|Sequence|441|450|DIGCDQHTSC
>sp|NSP5_ROTH6|NON-STRUCTURAL protein 5|Rotavirus A (strain
Query: 1 DIGCDQ 6
DIGCDQ
Sbjct: 102 DIGCDQ 107
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 DIGCDQHTSC 10
D+G H SC
Sbjct: 744 DVGAGAHYSC 753
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 3 GCDQH 7
GCD+H
Sbjct: 650 GCDKH 654
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 DIGCDQHTS 9
DI C++H S
Sbjct: 102 DITCNKHRS 110
>sp|VU51_HHV6Z|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6B (strain Z29)
Query: 2 IGCDQHT 8
+ CD HT
Sbjct: 258 MACDDHT 264
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 2 IGCDQHT 8
+ CD HT
Sbjct: 258 MACDDHT 264
>sp|PG172_VARV|PROTEIN A43|Variola virus
Query: 1 DIGCDQHTSC 10
DI C + SC
Sbjct: 109 DIQCSVNVSC 118
>sp|PG172_VAR67|PROTEIN A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DIGCDQHTSC 10
DI C + SC
Sbjct: 109 DIQCSVNVSC 118
>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)
Query: 1 DIGCDQHTSC 10
DI C + SC
Sbjct: 110 DIQCSVNVSC 119
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 3 GCDQH 7
GC QH
Sbjct: 471 GCSQH 475
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 3 GCDQH 7
GC QH
Sbjct: 471 GCSQH 475
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GCDQHTSC 10
GC Q T C
Sbjct: 597 GCAQVTGC 604
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GCDQHTSC 10
GC Q T C
Sbjct: 597 GCAQVTGC 604
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GCDQHTSC 10
GC Q T C
Sbjct: 597 GCAQVTGC 604
>sp|PG172_VACCC|PROTEIN A43|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DIGCDQHTSC 10
DI C + SC
Sbjct: 108 DIQCSVNVSC 117
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 5 DQHTSC 10
D+H SC
Sbjct: 2686 DEHRSC 2691
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 5 DQHTSC 10
D+H SC
Sbjct: 2686 DEHRSC 2691
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 DIGCDQHTS 9
D C+Q+TS
Sbjct: 39 DDECEQYTS 47
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 DIGCDQHTS 9
D C+Q+TS
Sbjct: 21 DDECEQYTS 29
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 2 IGCDQHT 8
I C +HT
Sbjct: 426 IACQKHT 432
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 DIGCDQHTSC 10
DI C+ T C
Sbjct: 4179 DINCNIPTQC 4188
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 DIGCDQHTSC 10
DI C+ T C
Sbjct: 4179 DINCNIPTQC 4188
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 3 GCDQH 7
GCD H
Sbjct: 325 GCDWH 329
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 4 CDQHTSC 10
CD T C
Sbjct: 60 CDMQTDC 66
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CDQHTSC 10
CD T C
Sbjct: 58 CDMQTDC 64
90|Sequence|446|455|QHTSCPVGQT
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 QHTSCPVGQ 9
QHT VGQ
Sbjct: 1130 QHTETSVGQ 1138
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 QHTSCPVGQ 9
QHT VGQ
Sbjct: 1129 QHTDTSVGQ 1137
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 QHTSCPVGQ 9
QHT VGQ
Sbjct: 1131 QHTDTSVGQ 1139
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 QHTSCPVGQ 9
QHT VGQ
Sbjct: 1150 QHTDTSVGQ 1158
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QHTSCPV 7
+HTSCP
Sbjct: 101 RHTSCPF 107
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QHTSCPV 7
+HTSCP
Sbjct: 101 RHTSCPF 107
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QHTSCP 6
+HTSCP
Sbjct: 101 RHTSCP 106
>sp|B3_HHV6Z|PROTEIN B3|Human herpesvirus 6B (strain Z29)
Query: 1 QHTSCP 6
+HTSCP
Sbjct: 54 KHTSCP 59
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 QHTSCPVG 8
HT+CP G
Sbjct: 2025 MHTTCPCG 2032
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 SCPVGQT 10
SCP G T
Sbjct: 1131 SCPCGAT 1137
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 HTSCPVG 8
HT+CP G
Sbjct: 2027 HTTCPCG 2033
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 4 SCPVGQT 10
SCP+G++
Sbjct: 160 SCPIGES 166
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 145 SCPVGE 150
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 145 SCPVGE 150
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 132 SCPVGE 137
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 141 SCPVGE 146
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 141 SCPVGE 146
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 160 SCPVGE 165
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 140 SCPVGE 145
Query: 1 QHTSCPVGQT 10
QH + P+G T
Sbjct: 43 QHQAEPIGNT 52
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 4 SCPVGQ 9
SCPVG+
Sbjct: 144 SCPVGE 149
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 TSCPVG 8
T CP+G
Sbjct: 1639 TCCPIG 1644
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 TSCPVGQ 9
+ CP+G+
Sbjct: 1008 SQCPIGE 1014
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 TSCPVGQ 9
+ CP+G+
Sbjct: 1005 SQCPIGE 1011
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPIGE 165
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPIGE 165
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPIGE 165
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPIGE 165
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPIGE 165
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPIGE 165
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 SCPVGQT 10
SCP G T
Sbjct: 1132 SCPCGLT 1138
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 HTSCPVG 8
HT CP G
Sbjct: 2026 HTRCPCG 2032
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPIGE 165
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPIGE 165
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPIGE 165
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPIGE 165
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPIGE 165
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPIGE 165
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 1 QHTSCPVGQT 10
Q SCP G++
Sbjct: 271 QKVSCPSGRS 280
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 4 SCPVG 8
SCP+G
Sbjct: 494 SCPIG 498
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPLGE 165
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPLGE 165
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPLGE 165
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPLGE 165
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 2 HTSCPVGQ 9
HT+ P+G+
Sbjct: 326 HTNSPLGE 333
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 HTSCP 6
H SCP
Sbjct: 1196 HQSCP 1200
>sp|US10_CHV1|VIRION protein US10 homolog|Cercopithecine herpesvirus 1 (CeHV-1)
Query: 2 HTSCPVGQ 9
H SCP+ +
Sbjct: 11 HESCPLAR 18
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 2 HTSCPVGQ 9
HT+ P+G+
Sbjct: 326 HTNSPLGE 333
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 HTSCP 6
H SCP
Sbjct: 1188 HQSCP 1192
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 HTSCP 6
H SCP
Sbjct: 1188 HQSCP 1192
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 4 SCPVGQ 9
SCP+G+
Sbjct: 160 SCPLGE 165
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 HTSCP 6
H SCP
Sbjct: 1189 HQSCP 1193
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 HTSCP 6
H SCP
Sbjct: 1189 HQSCP 1193
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 HTSCP 6
H SCP
Sbjct: 1191 HQSCP 1195
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 HTSCP 6
H SCP
Sbjct: 1191 HQSCP 1195
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 HTSCP 6
H SCP
Sbjct: 1189 HQSCP 1193
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 2 HTSCPVGQ 9
HT+ P+G+
Sbjct: 326 HTNSPLGE 333
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 HTSCPVGQT 10
+ SC +G+T
Sbjct: 122 YLSCKLGET 130
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 2 HTSCPVGQT 10
+ SC +G+T
Sbjct: 122 YLSCKLGET 130
91|Sequence|451|460|PVGQTCCPSL
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 2 VGQTCCPSL 10
+GQT PSL
Sbjct: 824 IGQTAVPSL 832
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 2 VGQTCCPSL 10
+GQT PSL
Sbjct: 822 IGQTAVPSL 830
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 VGQTCCP 8
+ TCCP
Sbjct: 1636 LADTCCP 1642
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 VGQTCCP 8
+ TCCP
Sbjct: 1636 LADTCCP 1642
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PVGQTCCPS 9
P G++ CPS
Sbjct: 87 PTGRSICPS 95
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PVGQTCCPS 9
P G++ CPS
Sbjct: 97 PTGRSICPS 105
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PVGQTCCPS 9
P G++ CPS
Sbjct: 97 PTGRSICPS 105
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 2 VGQTCCPSL 10
+GQT PS+
Sbjct: 842 IGQTAVPSV 850
>sp|C_NIPAV|PROTEIN C|Nipah virus
Query: 4 QTCCPSL 10
Q CCP L
Sbjct: 147 QRCCPML 153
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 PVGQTC 6
P+GQ C
Sbjct: 280 PIGQQC 285
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PVGQTC 6
P+GQ C
Sbjct: 280 PIGQQC 285
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 QTCCPSL 10
QTC PS+
Sbjct: 125 QTCSPSV 131
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 4 QTCCPSL 10
QTC PS+
Sbjct: 125 QTCSPSV 131
>sp|NSP6_ROTH7|NON-STRUCTURAL protein 6|Rotavirus A (isolate RVA/Human/United
Query: 5 TCCPSL 10
TCC SL
Sbjct: 32 TCCQSL 37
>sp|C_HENDH|PROTEIN C|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 QTCCPSL 10
Q CCP L
Sbjct: 147 QRCCPML 153
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GQTCCPS 9
GQT CPS
Sbjct: 368 GQTPCPS 374
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 3 GQTCCPS 9
GQT CPS
Sbjct: 368 GQTPCPS 374
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 3 GQTCCPS 9
GQT CPS
Sbjct: 368 GQTPCPS 374
>sp|NSP6_ROTHW|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 5 TCCPSL 10
TCC SL
Sbjct: 32 TCCRSL 37
>sp|NSP6_ROTHT|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 5 TCCPSL 10
TCC SL
Sbjct: 32 TCCRSL 37
>sp|NSP6_ROTHL|NON-STRUCTURAL protein 6|Rotavirus A (strain
Query: 5 TCCPSL 10
TCC SL
Sbjct: 32 TCCRSL 37
>sp|NSP6_ROTHK|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 5 TCCPSL 10
TCC SL
Sbjct: 32 TCCRSL 37
>sp|NSP6_ROTH6|NON-STRUCTURAL protein 6|Rotavirus A (strain
Query: 5 TCCPSL 10
TCC SL
Sbjct: 32 TCCRSL 37
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 5 TCCP 8
TCCP
Sbjct: 284 TCCP 287
>sp|NSP6_ROTH3|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 5 TCCPSL 10
TCC SL
Sbjct: 32 TCCQSL 37
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 1 PVGQTCCP 8
P+G+ CP
Sbjct: 162 PIGEAPCP 169
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 4 QTCCPSL 10
QTC P L
Sbjct: 942 QTCKPEL 948
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 4 QTCCPSL 10
QTC P L
Sbjct: 942 QTCKPDL 948
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 4 QTCCPSL 10
QTC P L
Sbjct: 942 QTCKPDL 948
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 QTCCPS 9
QTC PS
Sbjct: 224 QTCAPS 229
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VGQTCCPSL 10
+G T C SL
Sbjct: 1926 IGHTVCDSL 1934
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VGQTCCPSL 10
+G T C SL
Sbjct: 1926 IGHTVCDSL 1934
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 QTCCPS 9
QTC PS
Sbjct: 224 QTCAPS 229
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 QTCCPSL 10
+TCCP L
Sbjct: 1363 KTCCPLL 1369
>sp|NSP6_ROTAD|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 5 TCCPSL 10
TCC SL
Sbjct: 32 TCCRSL 37
>sp|E321_ADE07|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 7
Query: 1 PVGQTC 6
PVG TC
Sbjct: 25 PVGSTC 30
>sp|LF3_EBVG|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PVGQTCCPSL 10
PVG P L
Sbjct: 849 PVGHPAAPEL 858
>sp|LF3_EBVB9|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PVGQTCCPSL 10
PVG P L
Sbjct: 849 PVGHPAAPEL 858
>sp|E321_ADE03|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 1 PVGQTC 6
PVG TC
Sbjct: 25 PVGSTC 30
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 GQTCCPS 9
QTC PS
Sbjct: 223 NQTCAPS 229
>sp|E1A_ADE12|EARLY E1A protein|Human adenovirus A serotype 12
Query: 1 PVGQTCCPSL 10
P+G C P L
Sbjct: 91 PIGGECMPQL 100
92|Sequence|456|465|CCPSLGGSWA
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 1 CCPSLGGSWA 10
C P++G WA
Sbjct: 168 CTPAIGEHWA 177
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 CCPSLGGSWA 10
C P++G WA
Sbjct: 161 CVPAMGEHWA 170
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 CCPSLGGSWA 10
C P++G WA
Sbjct: 161 CVPAIGEHWA 170
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 CCPSLGGSWA 10
C P++G WA
Sbjct: 161 CVPAIGEHWA 170
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 CCPSLGGSWA 10
C P++G WA
Sbjct: 188 CVPAIGEHWA 197
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 CCPSLGGSWA 10
C P++G WA
Sbjct: 222 CAPAIGEHWA 231
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 1 CCPSLGGSWA 10
C P +G WA
Sbjct: 160 CAPPIGEHWA 169
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 1 CCPSLGGSWA 10
C P +G WA
Sbjct: 157 CTPPIGEHWA 166
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 CCPSLGGSW 9
C P+LG W
Sbjct: 160 CAPALGEHW 168
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 CCPSLGGSWA 10
C PS+G W+
Sbjct: 268 CKPSIGEHWS 277
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 CCPSLGGSWA 10
C P+ G W+
Sbjct: 162 CTPATGEHWS 171
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 4 SLGGSWA 10
+ GGSWA
Sbjct: 142 TTGGSWA 148
>sp|UL68_HCMVA|UNCHARACTERIZED protein UL68|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CPSLGGS 8
CP LGG+
Sbjct: 86 CPRLGGN 92
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 CCPSLGGS 8
C P LGGS
Sbjct: 53 CQPPLGGS 60
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 CPSLGGSW 9
CP L GS+
Sbjct: 894 CPELNGSF 901
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 CPSLGGSW 9
CP L GS+
Sbjct: 894 CPELNGSF 901
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 CPSLGGSW 9
CP L GS+
Sbjct: 894 CPELNGSF 901
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 CPSLGGSW 9
CP L GS+
Sbjct: 894 CPELNGSF 901
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 CPSLGGSW 9
CP + G W
Sbjct: 348 CPGVIGMW 355
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CPSLGGSW 9
CP G W
Sbjct: 859 CPGYAGPW 866
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 CPSLGGSW 9
CP + G W
Sbjct: 348 CPGVIGMW 355
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 CCPSLGGSWA 10
C P +G W+
Sbjct: 175 CKPPIGEHWS 184
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 CCPSLGGSWA 10
C P +G W+
Sbjct: 174 CKPPIGEHWS 183
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 2 CPSLGGSW 9
CP L GS+
Sbjct: 79 CPELSGSF 86
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CPSLG 6
CPS+G
Sbjct: 71 CPSVG 75
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CPSLG 6
CPS+G
Sbjct: 71 CPSVG 75
>sp|Y137_ADE02|UNCHARACTERIZED protein B-137|Human adenovirus C serotype 2
Query: 1 CCPSLGGSW 9
CC S G W
Sbjct: 125 CCASFFGHW 133
>sp|LF2_EBVG|PROTEIN LF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CPSLG 6
CPS+G
Sbjct: 71 CPSVG 75
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 LGGSW 9
LGG W
Sbjct: 1419 LGGEW 1423
>sp|VPR_HV2G1|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 5 LGGSW 9
LGG W
Sbjct: 19 LGGDW 23
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 CCPSLGGSW 9
CC + GG W
Sbjct: 670 CCCAAGGDW 678
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 CCPSLGGSW 9
CC + GG W
Sbjct: 670 CCCAAGGDW 678
>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 2 CPSLGG 7
CP+LG
Sbjct: 23 CPALGA 28
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 2 CPSLG 6
CPSLG
Sbjct: 887 CPSLG 891
93|Sequence|461|470|GGSWACCQLP
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 1 GGSWAC 6
GGSWAC
Sbjct: 144 GGSWAC 149
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 5 ACCQLP 10
ACC LP
Sbjct: 1208 ACCSLP 1213
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 5 ACCQLP 10
ACC LP
Sbjct: 1208 ACCSLP 1213
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 GGSWACCQL 9
GGSW+ Q+
Sbjct: 104 GGSWSILQM 112
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGSWACCQ 8
GG W C Q
Sbjct: 414 GGCWKCGQ 421
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GSWACCQ 8
G++ CCQ
Sbjct: 68 GAYVCCQ 74
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 GSWACCQ 8
G++ CCQ
Sbjct: 68 GAYVCCQ 74
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 GGSWACCQLP 10
GGS+AC + P
Sbjct: 150 GGSYACKKGP 159
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 GGSWACCQLP 10
GGS+AC + P
Sbjct: 150 GGSYACKRGP 159
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 GGSWACCQLP 10
GGS+AC + P
Sbjct: 150 GGSYACKRGP 159
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 4 WACCQ 8
W CC+
Sbjct: 324 WVCCE 328
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 GGSWAC 6
GGS+AC
Sbjct: 134 GGSYAC 139
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 GGSWAC 6
GGS+AC
Sbjct: 150 GGSYAC 155
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 GGSWAC 6
GGS+AC
Sbjct: 134 GGSYAC 139
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 GGSWACCQLP 10
G +W C LP
Sbjct: 391 GVAWIHCLLP 400
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 GGSWACCQLP 10
G +W C LP
Sbjct: 392 GVAWLHCLLP 401
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 GGSWACCQLP 10
G +W C LP
Sbjct: 392 GVAWLHCLLP 401
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 SWACCQL 9
SWA C++
Sbjct: 2429 SWALCEV 2435
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 SWACCQL 9
SWA C++
Sbjct: 2429 SWALCEV 2435
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 SWACCQL 9
SWA C++
Sbjct: 2429 SWALCEV 2435
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 SWACCQ-LP 10
SW CQ LP
Sbjct: 1895 SWMLCQPLP 1903
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 2 GSWACCQLP 10
GSW LP
Sbjct: 240 GSWPDTSLP 248
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GSWACCQLP 10
GSW LP
Sbjct: 240 GSWPDTSLP 248
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 2 GSWACCQLP 10
GSW LP
Sbjct: 240 GSWPDTSLP 248
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 GGSWACCQL 9
GGS CC +
Sbjct: 2436 GGSEVCCSM 2444
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 SWACCQ 8
SWA C+
Sbjct: 2429 SWALCE 2434
>sp|NEF_HV1OY|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGSWACCQL 9
GG W+ C +
Sbjct: 2 GGKWSKCSM 10
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 SWACCQ 8
SWA C+
Sbjct: 2429 SWALCE 2434
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 2 GSWACCQLP 10
G+W Q+P
Sbjct: 217 GNWLGIQIP 225
>sp|VE6_HPV63|PROTEIN E6|Human papillomavirus type 63
Query: 4 WACCQ 8
+ACCQ
Sbjct: 57 FACCQ 61
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 4 WACCQL 9
WAC ++
Sbjct: 369 WACLEM 374
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 GGSWA 5
GG WA
Sbjct: 213 GGGWA 217
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 GGSWACCQLP 10
GGS AC + P
Sbjct: 150 GGSGACKRGP 159
94|Sequence|466|475|CCQLPHAVCC
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CQLPHAVCC 10
C LP+ +CC
Sbjct: 460 CTLPYLLCC 468
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CQLPHAVCC 10
C LP+ +CC
Sbjct: 460 CTLPYLLCC 468
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 CQLPHAVC 9
C+ PH VC
Sbjct: 156 CEYPHTVC 163
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 CQLPHAVC 9
C+ PH VC
Sbjct: 156 CEYPHTVC 163
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 CQLPHAVC 9
C+ PH +C
Sbjct: 156 CEYPHTIC 163
>sp|YL13_ADE41|UNCHARACTERIZED 6.9 kDa protein in|Human adenovirus F serotype 41
Query: 1 CCQLPHAVC 9
CCQ P AVC
Sbjct: 45 CCQTPIAVC 53
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 4 LPHAVCC 10
LP+ +CC
Sbjct: 462 LPYLLCC 468
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 CCQLP 5
CC LP
Sbjct: 1209 CCSLP 1213
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 CCQLP 5
CC LP
Sbjct: 1209 CCSLP 1213
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CCQLPHA 7
CC P A
Sbjct: 134 CCNYPQA 140
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 CCQLPHA 7
CC L H+
Sbjct: 1173 CCSLDHS 1179
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CCQLPHA 7
CC P A
Sbjct: 134 CCNYPQA 140
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 2 CQLPHA 7
CQ PH
Sbjct: 296 CQTPHG 301
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1379 CCPVNFKKCC 1388
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1375 CCPVNFKKCC 1384
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1389 CCPVNFKKCC 1398
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 CQLPHA 7
CQ PH
Sbjct: 296 CQTPHG 301
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 2 CQLPHA 7
CQ PH
Sbjct: 296 CQTPHG 301
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CCQLPHA 7
CC+ P A
Sbjct: 134 CCKYPRA 140
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 2 CQLPHA 7
CQ PH
Sbjct: 296 CQTPHG 301
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1371 CCPVNFKKCC 1380
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1382 CCPVNFKRCC 1391
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1383 CCPVNFKRCC 1392
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1372 CCPVNFKKCC 1381
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1370 CCPVNFKKCC 1379
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 2 CQLPHA 7
CQ PH
Sbjct: 296 CQTPHG 301
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1384 CCPVNFKKCC 1393
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1373 CCPVNFKKCC 1382
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CCQLPHA 7
CC+ P A
Sbjct: 134 CCKYPRA 140
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1381 CCPVNFKRCC 1390
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1373 CCPVNFKRCC 1382
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1381 CCPVNFKKCC 1390
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1371 CCPVNFKRCC 1380
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CCQLPHA 7
CC P A
Sbjct: 134 CCNYPQA 140
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 CCQLPHAVCC 10
CC + CC
Sbjct: 1391 CCPVNFKRCC 1400
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CCQLPHA 7
CC P A
Sbjct: 134 CCNYPQA 140
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 CQLPHAV 8
C++PH +
Sbjct: 43 CRIPHHI 49
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 CQLPHAV 8
C++PH +
Sbjct: 43 CRIPHHI 49
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 CQLPHAV 8
C++PH +
Sbjct: 43 CRIPHHI 49
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 CQLPHAV 8
C++PH +
Sbjct: 43 CRIPHHI 49
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CCQLPHA 7
CC P A
Sbjct: 134 CCNYPQA 140
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CCQLPHA 7
CC P A
Sbjct: 134 CCNYPQA 140
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 CCQLPH 6
CC PH
Sbjct: 608 CCIEPH 613
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 CCQLPH 6
CC PH
Sbjct: 608 CCIEPH 613
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 CCQLPH 6
CC PH
Sbjct: 608 CCIEPH 613
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 CCQLPH 6
CC PH
Sbjct: 608 CCIEPH 613
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 CCQLPH 6
CC PH
Sbjct: 608 CCIEPH 613
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 CCQLPH 6
CC PH
Sbjct: 609 CCIEPH 614
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 CCQLPH 6
CC PH
Sbjct: 609 CCIEPH 614
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 CCQLPH 6
CC PH
Sbjct: 609 CCIEPH 614
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 CCQLPH 6
CC PH
Sbjct: 608 CCIEPH 613
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 CCQLPH 6
CC PH
Sbjct: 608 CCIEPH 613
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CCQLPH 6
CC L H
Sbjct: 5037 CCSLSH 5042
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 CCQLPHAVCC 10
C Q A+ C
Sbjct: 691 CAQAKQAISC 700
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 CCQLPHAVCC 10
C Q A+ C
Sbjct: 691 CAQAKQAISC 700
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 CCQLPHAVCC 10
C Q A+ C
Sbjct: 691 CAQAKQAISC 700
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CCQLPHAVCC 10
C Q A+ C
Sbjct: 691 CAQAKQAISC 700
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CCQLPHAVCC 10
C Q A+ C
Sbjct: 683 CAQAKQAISC 692
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 CCQLPHAVCC 10
C Q A+ C
Sbjct: 691 CAQAKQAISC 700
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 CCQLPHAVCC 10
C Q A+ C
Sbjct: 691 CAQAKQAISC 700
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 CCQLPHAVCC 10
C Q A+ C
Sbjct: 691 CAQAKQAISC 700
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 CCQLPHAVCC 10
C Q A+ C
Sbjct: 691 CAQAKQAISC 700
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CCQLPH 6
CC L H
Sbjct: 5014 CCNLSH 5019
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 CCQLPH 6
C Q PH
Sbjct: 948 CLQCPH 953
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 2 CQLPH 6
CQLP+
Sbjct: 280 CQLPY 284
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 2 CQLPH 6
CQLP+
Sbjct: 280 CQLPY 284
>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 CCQLPHA 7
CC P A
Sbjct: 134 CCNYPRA 140
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 2 CQLPHAVC 9
CQL VC
Sbjct: 536 CQLYRIVC 543
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 5 PHAVC 9
PH VC
Sbjct: 632 PHRVC 636
95|Sequence|471|480|HAVCCEDRQH
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 4 CCEDRQH 10
CC DR+H
Sbjct: 531 CCIDRKH 537
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 4 CCEDRQH 10
CC DR+H
Sbjct: 535 CCIDRKH 541
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 4 CCEDRQ 9
CC DR+
Sbjct: 2070 CCPDRE 2075
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 HAVCC 5
HA+CC
Sbjct: 403 HAICC 407
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 HAVCC 5
HA+CC
Sbjct: 403 HAICC 407
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 HAVCC 5
HA+CC
Sbjct: 403 HALCC 407
>sp|PG176_VACCC|PROTEIN OPG176|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VCCEDR 8
+CC+ R
Sbjct: 154 ICCDSR 159
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 HAVCC 5
HA+CC
Sbjct: 403 HALCC 407
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 2 AVCCEDRQH 10
A CC +QH
Sbjct: 172 ADCCLYKQH 180
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 3 VCCEDRQH 10
V C DR+H
Sbjct: 555 VMCIDRKH 562
>sp|PG176_MONPV|PROTEIN OPG176|Monkeypox virus (MPXV)
Query: 3 VCCEDR 8
+CC+ R
Sbjct: 154 ICCDSR 159
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 3 VCCE 6
VCCE
Sbjct: 291 VCCE 294
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VCCE 6
VCCE
Sbjct: 291 VCCE 294
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 3 VCCE 6
VCCE
Sbjct: 291 VCCE 294
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 VCCEDRQH 10
+CC R H
Sbjct: 746 LCCAPRAH 753
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 VCCEDRQH 10
+CC R H
Sbjct: 746 LCCAPRAH 753
>sp|PG176_VAR67|PROTEIN OPG176|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 VCCEDR 8
+CC+ R
Sbjct: 154 ICCDSR 159
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 5 CEDRQH 10
C DR+H
Sbjct: 578 CVDRKH 583
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 3 VCCEDRQ 9
+CCE ++
Sbjct: 157 ICCEPKK 163
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 AVCCEDRQH 10
++CC RQ+
Sbjct: 1128 SLCCPRRQN 1136
96|Sequence|476|485|EDRQHCCPAG
>sp|C_NIPAV|PROTEIN C|Nipah virus
Query: 4 QHCCP 8
Q CCP
Sbjct: 147 QRCCP 151
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 6 CCPAG 10
CCP G
Sbjct: 1640 CCPIG 1644
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 3 RQHCCPAG 10
RQH P+G
Sbjct: 124 RQHLVPSG 131
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 3 RQHCCPAG 10
RQH P+G
Sbjct: 124 RQHLVPSG 131
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 RQHCCPA 9
+QHC P
Sbjct: 533 KQHCKPG 539
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 2 DRQHCCP 8
++QHC P
Sbjct: 62 EKQHCGP 68
>sp|C_HENDH|PROTEIN C|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 QHCCP 8
Q CCP
Sbjct: 147 QRCCP 151
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 2 DRQHCCP 8
++QHC P
Sbjct: 256 EKQHCGP 262
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 217 HYCAPAG 223
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 228 HYCAPAG 234
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 218 HYCAPAG 224
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 217 HYCAPAG 223
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 212 HYCAPAG 218
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 213 HYCAPAG 219
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 216 HYCAPAG 222
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 207 HYCAPAG 213
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 219 HYCAPAG 225
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 212 HYCAPAG 218
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 217 HYCAPAG 223
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 210 HYCAPAG 216
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 214 HYCAPAG 220
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 216 HYCAPAG 222
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 221 HYCAPAG 227
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 214 HYCAPAG 220
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 221 HYCAPAG 227
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 217 HYCAPAG 223
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 216 HYCAPAG 222
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 214 HYCAPAG 220
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 228 HYCAPAG 234
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 216 HYCAPAG 222
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 216 HYCAPAG 222
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 213 HYCAPAG 219
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 217 HYCAPAG 223
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 221 HYCAPAG 227
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 216 HYCAPAG 222
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 216 HYCAPAG 222
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 216 HYCAPAG 222
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 212 HYCAPAG 218
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 214 HYCAPAG 220
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 224 HYCAPAG 230
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 218 HYCAPAG 224
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 218 HYCAPAG 224
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 214 HYCAPAG 220
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 209 HYCAPAG 215
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 DRQHCCPAG 10
DR H P G
Sbjct: 215 DRTHPAPVG 223
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 218 HYCVPAG 224
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 229 HYCTPAG 235
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 221 HYCTPAG 227
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 223 HYCTPAG 229
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 219 HYCTPAG 225
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 HCCPAG 10
H CP G
Sbjct: 467 HSCPDG 472
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 4 QHCC 7
QHCC
Sbjct: 88 QHCC 91
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 4 QHCC 7
QHCC
Sbjct: 88 QHCC 91
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 4 QHCCP 8
+ CCP
Sbjct: 1377 EECCP 1381
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 QHCCP 8
+ CCP
Sbjct: 1381 EECCP 1385
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 QHCCP 8
+ CCP
Sbjct: 1370 EECCP 1374
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 4 QHCCP 8
+ CCP
Sbjct: 1387 EECCP 1391
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 QHCCP 8
+ CCP
Sbjct: 1380 EECCP 1384
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 QHCCP 8
+ CCP
Sbjct: 1371 EECCP 1375
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 QHCCP 8
+ CCP
Sbjct: 1369 EECCP 1373
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 4 QHCCP 8
+ CCP
Sbjct: 1371 EECCP 1375
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 QHCCP 8
+ CCP
Sbjct: 1379 EECCP 1383
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 QHCCP 8
+ CCP
Sbjct: 1369 EECCP 1373
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 4 QHCCP 8
+ CCP
Sbjct: 1368 EECCP 1372
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 4 QHCCP 8
+ CCP
Sbjct: 1382 EECCP 1386
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 211 HYCAPAG 217
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 4 QHCCP 8
+ CCP
Sbjct: 1379 EECCP 1383
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 QHCCP 8
+ CCP
Sbjct: 1389 EECCP 1393
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 4 QHCCPAG 10
+C PAG
Sbjct: 213 HYCAPAG 219
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 5 HCCPA 9
HC PA
Sbjct: 156 HCAPA 160
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 DRQHCCPAG 10
DR H P G
Sbjct: 215 DRTHPAPVG 223
97|Sequence|481|490|CCPAGYTCNV
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAGY CN
Sbjct: 218 CAPAGYAILKCN 229
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAGY CN
Sbjct: 216 CAPAGYAILKCN 227
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAGY CN
Sbjct: 220 CAPAGYAILKCN 231
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 CPAGYTCNV 10
CP G C+V
Sbjct: 1176 CPEGTVCSV 1184
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 CPAGYTCNV 10
CP G C+V
Sbjct: 1177 CPEGTVCSV 1185
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAGY CN
Sbjct: 209 CAPAGYAILKCN 220
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGY 6
C PAGY
Sbjct: 215 CAPAGY 220
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAGY CN
Sbjct: 214 CAPAGYAIFKCN 225
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 CCPAGYTC 8
C PA TC
Sbjct: 93 CSPASSTC 100
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 223 CAPAGFAILKCN 234
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 216 CAPAGFAILKCN 227
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 218 CAPAGFAILKCN 229
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 218 CAPAGFAILKCN 229
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 230 CAPAGFAIIKCN 241
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 2 CPAGYTCNV 10
C A Y CN+
Sbjct: 49 CIASYCCNL 57
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 218 CAPAGFAILKCN 229
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 218 CAPAGFAILKCN 229
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 2 CPAGYTCNV 10
C A Y CN+
Sbjct: 49 CIASYCCNL 57
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 214 CAPAGFAILKCN 225
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 CPAGYTC 8
CP G++C
Sbjct: 463 CPWGHSC 469
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 216 CAPAGFAILKCN 227
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 223 CTPAGFAILKCN 234
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 216 CAPAGFAILKCN 227
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 218 CAPAGFAILKCN 229
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 218 CAPAGFAILKCN 229
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 223 CAPAGFAILKCN 234
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 221 CTPAGFAILKCN 232
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 219 CAPAGFAILKCN 230
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 215 CAPAGFAILKCN 226
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 211 CAPAGFAILKCN 222
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 218 CAPAGFAILKCN 229
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 221 CAPAGFAILKCN 232
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 223 CAPAGFAILKCN 234
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 2 CPAGYTC 8
CP G TC
Sbjct: 286 CPWGNTC 292
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 226 CAPAGFAILKCN 237
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 219 CAPAGFAILKCN 230
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 214 CAPAGFAILKCN 225
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 212 CAPAGFAILKCN 223
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 225 CTPAGFALLKCN 236
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 231 CTPAGFAILKCN 242
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C PAG+ CN
Sbjct: 220 CVPAGFAMLKCN 231
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGY 6
C PAG+
Sbjct: 216 CAPAGF 221
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGY 6
C PAG+
Sbjct: 230 CAPAGF 235
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGY 6
C PAG+
Sbjct: 219 CAPAGF 224
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGY 6
C PAG+
Sbjct: 220 CAPAGF 225
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGY 6
C PAG+
Sbjct: 220 CAPAGF 225
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGY 6
C PAG+
Sbjct: 219 CAPAGF 224
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PAGYTC 8
PAG+ C
Sbjct: 374 PAGWAC 379
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PAGYTC 8
PAG+ C
Sbjct: 374 PAGWAC 379
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGY 6
C PAG+
Sbjct: 213 CAPAGF 218
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGY 6
C PAG+
Sbjct: 219 CAPAGF 224
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CPAGYTCNV 10
C YTC V
Sbjct: 279 CNQNYTCRV 287
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CCPAGYT---CN 9
C P GY CN
Sbjct: 218 CAPTGYAIFKCN 229
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CPAGYTCNV 10
C YTC V
Sbjct: 279 CNQNYTCRV 287
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 72 CSPNGYS 78
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 1 CCPAGYT 7
C P G+T
Sbjct: 127 CVPPGFT 133
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 CCPAGYT 7
C P GY+
Sbjct: 62 CSPNGYS 68
>sp|E4RF1_ADE02|EARLY 4 ORF1 protein|Human adenovirus C serotype 2
Query: 1 CCPAGY 6
C P GY
Sbjct: 54 CIPPGY 59
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 CCPAGYT---CN 9
C P GY CN
Sbjct: 226 CAPPGYALLRCN 237
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CCPAGYTCNV 10
CPAG+ +
Sbjct: 203 LCPAGWHARI 212
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 CCPAGYTCN 9
CC GY N
Sbjct: 756 CCYNGYFKN 764
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 CCPAGYTCN 9
CC GY N
Sbjct: 755 CCYNGYFKN 763
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 CCPAGYTCN 9
CC GY N
Sbjct: 755 CCYNGYFKN 763
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 2 CPAGYT 7
CP YT
Sbjct: 276 CPLSYT 281
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 5 GYTC 8
GYTC
Sbjct: 160 GYTC 163
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 5 GYTC 8
GYTC
Sbjct: 254 GYTC 257
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 CCPAGY 6
C PAG+
Sbjct: 213 CAPAGF 218
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CPAGYTCNV 10
CPAG+ +
Sbjct: 1171 CPAGHVVGI 1179
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 CCPAGYT---CN 9
C P GY CN
Sbjct: 227 CAPPGYALLRCN 238
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 CCPAGY 6
C PAG+
Sbjct: 215 CAPAGF 220
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CPAGYTCNV 10
CPAG+ +
Sbjct: 1171 CPAGHAVGI 1179
98|Sequence|486|495|YTCNVKARSC
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YTCNVKARSC 10
YTCNV R+C
Sbjct: 113 YTCNVTLRNC 122
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TCNVKARSC 10
TCN+K C
Sbjct: 590 TCNIKVTVC 598
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TCNVKARSC 10
TCN+K C
Sbjct: 590 TCNIKVTVC 598
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 YTCNVKARSC 10
Y+CN AR C
Sbjct: 1040 YSCNAGARVC 1049
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 YTCNVKARSC 10
Y+CN AR C
Sbjct: 1040 YSCNAGARVC 1049
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TCNVKARSC 10
TCN++ C
Sbjct: 590 TCNIRVTVC 598
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 1 YTCNVKARSC 10
YTC+ + SC
Sbjct: 91 YTCSPASSSC 100
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 YTCNVKAR 8
Y C +KAR
Sbjct: 380 YKCIIKAR 387
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TCNVKARS 9
TC +KAR+
Sbjct: 2714 TCYIKARA 2721
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 TCNVKARS 9
TC +KAR+
Sbjct: 2714 TCYIKARA 2721
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YTCNVKARSC 10
YT N+ R C
Sbjct: 205 YTSNLITRGC 214
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YTCNVKARSC 10
YT N+ R C
Sbjct: 205 YTSNLITRGC 214
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YTCNVKARSC 10
YT N+ R C
Sbjct: 205 YTSNLITRGC 214
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 TCNVKARSC 10
TC + R+C
Sbjct: 460 TCGQQMRTC 468
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YTCNVKARSC 10
YT N+ R C
Sbjct: 205 YTSNLITRGC 214
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YTCNVKARSC 10
YT N+ R C
Sbjct: 205 YTSNLITRGC 214
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YTCNVKARSC 10
YT N+ R C
Sbjct: 205 YTSNLITRGC 214
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 YTCNVKARSC 10
YT N+ R C
Sbjct: 205 YTSNLITRGC 214
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 YTCNVKARSC 10
Y NV+ R C
Sbjct: 522 YFGNVRLREC 531
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 YTCNVKARSC 10
Y NV+ R C
Sbjct: 519 YFGNVRLREC 528
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 YTCNVKARSC 10
Y NV+ R C
Sbjct: 518 YFGNVRLREC 527
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 TCNVKARS 9
TC VKA++
Sbjct: 2740 TCYVKAKA 2747
99|Sequence|491|500|KARSCEKEVV
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 1 KARSCEKE 8
KA+ CEK+
Sbjct: 171 KAKVCEKD 178
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 1 KARSCEKEV 9
K R CE+E+
Sbjct: 250 KERICEEEI 258
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 5 CEKEVV 10
C+KE+V
Sbjct: 237 CQKEIV 242
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CEKEV 9
CEKE+
Sbjct: 537 CEKEI 541
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 5 CEKEV 9
CEKE+
Sbjct: 533 CEKEI 537
100|Sequence|496|505|EKEVVSAQPA
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 EKEVVSAQP 9
E+EV++A P
Sbjct: 1513 EREVITASP 1521
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 EKEVVSAQP 9
E+EV++A P
Sbjct: 1513 EREVITASP 1521
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 EKEVVSAQP 9
E+EV++A P
Sbjct: 1513 EREVITASP 1521
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 EKEVVSAQP 9
E+EV++A P
Sbjct: 1513 EREVITASP 1521
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 EKEVVSAQP 9
E+EV++A P
Sbjct: 1513 EREVITASP 1521
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 EKEVVSAQP 9
E+E+++A P
Sbjct: 1513 EREIITASP 1521
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 EKEVVSAQP 9
E+E+++A P
Sbjct: 1513 EREIITASP 1521
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 2 KEVVSAQP 9
KE+++A P
Sbjct: 17 KEIITASP 24
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KEVVSAQP 9
KE+++A P
Sbjct: 17 KEIITASP 24
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 2 KEVVSAQP 9
KE+++A P
Sbjct: 17 KEIITASP 24
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 EKEVVSAQP 9
E+E ++A P
Sbjct: 1513 EREAITASP 1521
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 EKEVVSAQP 9
E+E ++A P
Sbjct: 1514 EREAITASP 1522
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 EKEVVSAQP 9
E+E ++A P
Sbjct: 1513 EREAITASP 1521
>sp|EBNA5_EBVG|EPSTEIN-BARR nuclear antigen leader protein|Epstein-Barr virus (strain GD1)
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 55 EEEVVSGSPS 64
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 121 EEEVVSGSPS 130
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 187 EEEVVSGSPS 196
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 253 EEEVVSGSPS 262
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 319 EEEVVSGSPS 328
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 385 EEEVVSGSPS 394
>sp|EBNA5_EBVB9|EPSTEIN-BARR nuclear antigen leader protein|Epstein-Barr virus (strain B95-8)
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 55 EEEVVSGSPS 64
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 121 EEEVVSGSPS 130
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 187 EEEVVSGSPS 196
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 253 EEEVVSGSPS 262
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 319 EEEVVSGSPS 328
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 385 EEEVVSGSPS 394
>sp|EBNA5_EBVA8|EPSTEIN-BARR nuclear antigen leader protein|Epstein-Barr virus (strain AG876)
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 55 EEEVVSGSPS 64
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 121 EEEVVSGSPS 130
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 187 EEEVVSGSPS 196
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 253 EEEVVSGSPS 262
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 319 EEEVVSGSPS 328
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 385 EEEVVSGSPS 394
Query: 1 EKEVVSAQPA 10
E+EVVS P+
Sbjct: 451 EEEVVSGSPS 460
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EKEVVSAQP 9
E+EV +A P
Sbjct: 58 EQEVAAADP 66
101|Sequence|501|510|SAQPATFLAR
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 AQPATFLA 9
AQP FLA
Sbjct: 3021 AQPVDFLA 3028
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 AQPATFLA 9
AQP FLA
Sbjct: 3021 AQPVDFLA 3028
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 SAQPATFLA 9
SA P TFLA
Sbjct: 44 SAPPLTFLA 52
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SAQPATFLA 9
SA P TFLA
Sbjct: 44 SAPPLTFLA 52
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 1 SAQPATF 7
+AQPAT+
Sbjct: 511 AAQPATY 517
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 SAQPATFL 8
QP TFL
Sbjct: 555 GGQPVTFL 562
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 SAQPATFL 8
QP TFL
Sbjct: 555 GGQPVTFL 562
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 SAQPATFL 8
QP TFL
Sbjct: 555 GGQPVTFL 562
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 QPATFLAR 10
QP TFL +
Sbjct: 271 QPRTFLLK 278
102|Sequence|506|515|TFLARSPHVG
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 TFLARSPHV 9
TFL ++PH+
Sbjct: 231 TFLQKNPHL 239
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FLARSPHV 9
FL+ SPHV
Sbjct: 224 FLSTSPHV 231
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FLARSPHV 9
FL+ SPHV
Sbjct: 293 FLSTSPHV 300
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 1 TFLARS 6
TFLARS
Sbjct: 63 TFLARS 68
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 1 TFLARS 6
TFLARS
Sbjct: 257 TFLARS 262
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 TFLARS 6
TFLARS
Sbjct: 2903 TFLARS 2908
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 TFLARSPHV 9
TF PHV
Sbjct: 6 TFFQEVPHV 14
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 TFLARSPHV 9
TF PHV
Sbjct: 6 TFFQEVPHV 14
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 TFLARSPHVG 10
+F+A +PH+
Sbjct: 367 SFVASNPHLA 376
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 TFLARSPHVG 10
+F+A +PH+
Sbjct: 367 SFVASNPHLA 376
103|Sequence|511|520|SPHVGVKDVE
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HVGVKDVE 10
H+GVKD E
Sbjct: 302 HIGVKDSE 309
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HVGVKDVE 10
H+GVKD E
Sbjct: 302 HIGVKDSE 309
>sp|VE7_HPV28|PROTEIN E7|Human papillomavirus 28
Query: 2 PHVGVKDVE 10
PH VKD+E
Sbjct: 4 PHPTVKDIE 12
>sp|VE7_HPV10|PROTEIN E7|Human papillomavirus type 10
Query: 2 PHVGVKDVE 10
PH VKD+E
Sbjct: 4 PHPTVKDIE 12
>sp|VE7_HPV94|PROTEIN E7|Human papillomavirus type 94
Query: 2 PHVGVKDVE 10
PH VKD+E
Sbjct: 4 PHPTVKDIE 12
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 2 PHVGVKDV 9
PHV +DV
Sbjct: 397 PHVNAEDV 404
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 2 PHVGV 6
PHVG+
Sbjct: 643 PHVGI 647
>sp|NSS_CCHFI|NON-STRUCTURAL protein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 SPHVGVK 7
SPH G+K
Sbjct: 58 SPHGGLK 64
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SPHVGV 6
+PHVG+
Sbjct: 210 APHVGL 215
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SPHVGV 6
+PHVG+
Sbjct: 210 APHVGL 215
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SPHVGV 6
+PHVG+
Sbjct: 210 APHVGL 215
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SPHVGV 6
+PHVG+
Sbjct: 210 APHVGL 215
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 SPHVGV 6
+PHVG+
Sbjct: 210 APHVGM 215
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 SPHVGV 6
+PHVG+
Sbjct: 210 APHVGM 215
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 SPHVGV 6
+PHVG+
Sbjct: 210 APHVGM 215
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 SPHVGV 6
+PHVG+
Sbjct: 210 APHVGM 215
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 SPHVGV 6
+PHVG+
Sbjct: 210 APHVGM 215
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 4 VGVKDVE 10
VGV DVE
Sbjct: 551 VGVADVE 557
>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 3 HVGVKD 8
H GVKD
Sbjct: 194 HSGVKD 199
>sp|YEC4_EBVB9|UNCHARACTERIZED protein EC-RF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 HVGVKD 8
HVG+KD
Sbjct: 186 HVGLKD 191
>sp|PG070_VARV|PROTEIN OPG070|Variola virus
Query: 4 VGVKDVE 10
+G+KD++
Sbjct: 198 IGIKDID 204
>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 VGVKDVE 10
+G+KD++
Sbjct: 198 IGIKDID 204
>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)
Query: 4 VGVKDVE 10
+G+KD++
Sbjct: 198 IGIKDID 204
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 1 SPHVGVKDVE 10
S H G +DVE
Sbjct: 98 SNHHGGRDVE 107
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 SPHVGVKDVE 10
S H G +DVE
Sbjct: 98 SNHHGGRDVE 107
104|Sequence|516|525|VKDVECGEGH
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VKDVECGE 8
+KD+ECG+
Sbjct: 293 IKDLECGD 300
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VKDVECGE 8
+KD+ECG+
Sbjct: 293 IKDLECGD 300
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 345 DCGEGH 350
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 345 DCGEGH 350
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 345 DCGEGH 350
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 346 DCGEGH 351
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 346 DCGEGH 351
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 346 DCGEGH 351
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 5 ECGEGH 10
+CGEGH
Sbjct: 346 DCGEGH 351
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 VKDVECGEG 9
V DV CG G
Sbjct: 37 VADVACGTG 45
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VKDVECGEG 9
V DV CG G
Sbjct: 37 VADVACGTG 45
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 KDVECGEG 9
K+++CG+G
Sbjct: 799 KELKCGQG 806
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 KDVECGEG 9
K+++CG+G
Sbjct: 774 KELKCGDG 781
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 DVECGEG 9
++ CGEG
Sbjct: 787 EIRCGEG 793
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 785 KELKCGSG 792
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 785 KELKCGSG 792
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 785 KELKCGSG 792
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 785 KELKCGSG 792
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 785 KELKCGSG 792
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 784 KELKCGSG 791
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 784 KELKCGSG 791
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 784 KELKCGSG 791
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 784 KELKCGSG 791
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 784 KELKCGSG 791
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 786 KELKCGSG 793
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 786 KELKCGSG 793
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 786 KELKCGSG 793
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 786 KELKCGSG 793
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 786 KELKCGSG 793
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 786 KELKCGSG 793
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 786 KELKCGSG 793
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 804 KELKCGSG 811
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 5 ECGEGH 10
+CG GH
Sbjct: 354 DCGAGH 359
>sp|PRO_ADE05|PROTEASE adenovirus C serotype 5
Query: 1 VKDVECG 7
VKD+ CG
Sbjct: 12 VKDLGCG 18
>sp|PRO_ADE02|PROTEASE adenovirus C serotype 2
Query: 1 VKDVECG 7
VKD+ CG
Sbjct: 12 VKDLGCG 18
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 506 KELKCGSG 513
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 5 ECGEGH 10
+CG GH
Sbjct: 354 DCGAGH 359
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KDVECGEG 9
K+++CG G
Sbjct: 786 KELKCGSG 793
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 KDVECGEG 9
++++CG+G
Sbjct: 781 REMKCGDG 788
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 282 ECGDG 286
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 KDVECGEG 9
++++CG+G
Sbjct: 789 RELKCGDG 796
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 143 ECGDG 147
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 143 ECGDG 147
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 143 ECGDG 147
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 143 ECGDG 147
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 143 ECGDG 147
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 143 ECGDG 147
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 143 ECGDG 147
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 143 ECGDG 147
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 143 ECGDG 147
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 143 ECGDG 147
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 143 ECGDG 147
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 KDVECGEG 9
++++CG+G
Sbjct: 789 RELKCGDG 796
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 KDVECGEG 9
++++CG+G
Sbjct: 789 RELKCGDG 796
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 KDVECGEG 9
++++CG+G
Sbjct: 789 RELKCGDG 796
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 1 VKDVEC 6
V+D+EC
Sbjct: 157 VRDLEC 162
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 1 VKDVEC 6
V+D+EC
Sbjct: 166 VRDLEC 171
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VKDVEC 6
V+D+EC
Sbjct: 166 VRDLEC 171
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 1 VKDVEC 6
V+D+EC
Sbjct: 166 VRDLEC 171
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 KDVECGEG 9
++++CG+G
Sbjct: 789 RELKCGDG 796
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 KDVECGEG 9
++++CG+G
Sbjct: 789 RELKCGDG 796
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 KDVECGEG 9
++++CG+G
Sbjct: 789 RELKCGDG 796
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 KDVECGEG 9
++++CG+G
Sbjct: 789 RELKCGDG 796
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 KDVECGEG 9
++++CG+G
Sbjct: 789 RELKCGDG 796
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 VECGEG 9
V CGEG
Sbjct: 301 VVCGEG 306
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 5 ECGEGH 10
+CG GH
Sbjct: 345 DCGMGH 350
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 ECGEG 9
ECG+G
Sbjct: 282 ECGDG 286
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VKDVECGE 8
V DV+C E
Sbjct: 231 VVDVDCAE 238
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VKDVECGE 8
V DV+C E
Sbjct: 231 VVDVDCAE 238
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 5 ECGEGH 10
EC EG+
Sbjct: 179 ECNEGY 184
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 KDVECGEG 9
++++CG+G
Sbjct: 789 RELKCGDG 796
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 KDVECG 7
KD+ CG
Sbjct: 2013 KDIYCG 2018
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 KDVECG 7
KD+ CG
Sbjct: 2013 KDIYCG 2018
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 VECGEG 9
V CG+G
Sbjct: 830 VRCGDG 835
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 VECGEG 9
V CG+G
Sbjct: 830 VRCGDG 835
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 VECGEG 9
V CG+G
Sbjct: 830 VRCGDG 835
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 KDVECGEG 9
++++CG G
Sbjct: 797 RELKCGSG 804
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 KDVECGEG 9
++++CG G
Sbjct: 804 RELKCGSG 811
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 KDVECGEG 9
++++CG G
Sbjct: 797 RELKCGSG 804
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 KDVECGEG 9
++++CG G
Sbjct: 786 RELKCGSG 793
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 KDVECGEG 9
++++CG G
Sbjct: 785 RELKCGSG 792
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 KDVECGEG 9
++++CG G
Sbjct: 786 RELKCGSG 793
105|Sequence|521|530|CGEGHFCHDN
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 346 CGEGHSCH 353
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 346 CGEGHSCH 353
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 346 CGEGHSCH 353
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 347 CGEGHSCH 354
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 347 CGEGHSCH 354
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 347 CGEGHSCH 354
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 CGEGHFCH 8
CGEGH CH
Sbjct: 347 CGEGHSCH 354
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 CGEGHFCH 8
CG GH CH
Sbjct: 355 CGAGHSCH 362
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 CGEGHFCH 8
CG+G+FC+
Sbjct: 356 CGDGYFCY 363
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 CGEGHFCH 8
CG GH CH
Sbjct: 355 CGAGHSCH 362
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 CGEGHFCH 8
CG+G+FC+
Sbjct: 356 CGDGYFCY 363
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 CGEGHFCH 8
CG+G FC+
Sbjct: 354 CGDGQFCY 361
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 1 CGEGHFCH 8
CG+G+FC+
Sbjct: 22 CGDGYFCY 29
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 CGEGHFCH 8
CG+G FC+
Sbjct: 354 CGDGQFCY 361
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 CGEGHFCH 8
CG GH CH
Sbjct: 346 CGMGHSCH 353
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 CGEGHFCHDN 10
CG+G F H++
Sbjct: 808 CGQGIFIHND 817
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 737 CGSGIFVHND 746
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 806 CGSGVFIHND 815
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2610 CGRGGWCY 2617
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 802 CGSGVFIHND 811
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2607 CGRGGWCY 2614
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 806 CGSGVFIHND 815
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2610 CGRGGWCY 2617
Query: 4 GHFCHD 9
GH C D
Sbjct: 165 GHMCDD 170
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 801 CGSGIFIHND 810
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 808 CGSGIFIHND 817
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 801 CGSGIFIHND 810
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 CGEGHFCHD 9
CGE F H+
Sbjct: 93 CGENTFSHN 101
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 CGEGHFCHDN 10
CG G F H++
Sbjct: 809 CGSGIFVHND 818
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 CGEGHFCHDN 10
CG CH N
Sbjct: 1785 CGSALICHVN 1794
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 GHFCHD 9
GHF HD
Sbjct: 30 GHFPHD 35
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 GEGHFC 7
GEG FC
Sbjct: 754 GEGDFC 759
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 2 GEGHFCHD 9
EGHF +D
Sbjct: 462 AEGHFLND 469
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 2 GEGHFCHDN 10
G+ H CH N
Sbjct: 63 GDVHVCHIN 71
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 1 CGEGHFC 7
CGE H C
Sbjct: 49 CGEYHVC 55
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 1 CGEGHFC 7
CGE H C
Sbjct: 49 CGEYHVC 55
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2589 CGRGGWCY 2596
Query: 1 CGEGHFC 7
CG +FC
Sbjct: 2681 CGVDNFC 2687
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2588 CGRGGWCY 2595
Query: 1 CGEGHFC 7
CG +FC
Sbjct: 2680 CGVDNFC 2686
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2589 CGRGGWCY 2596
Query: 1 CGEGHFC 7
CG +FC
Sbjct: 2681 CGVDNFC 2687
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2588 CGRGGWCY 2595
Query: 1 CGEGHFC 7
CG +FC
Sbjct: 2680 CGVDNFC 2686
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2588 CGRGGWCY 2595
Query: 1 CGEGHFC 7
CG +FC
Sbjct: 2680 CGVDNFC 2686
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2589 CGRGGWCY 2596
Query: 1 CGEGHFC 7
CG +FC
Sbjct: 2681 CGVDNFC 2687
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2588 CGRGGWCY 2595
Query: 1 CGEGHFC 7
CG +FC
Sbjct: 2680 CGVDNFC 2686
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2588 CGRGGWCY 2595
Query: 1 CGEGHFC 7
CG +FC
Sbjct: 2680 CGVDNFC 2686
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2588 CGRGGWCY 2595
Query: 1 CGEGHFC 7
CG +FC
Sbjct: 2680 CGVDNFC 2686
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 CGEGHFCH 8
CG G +C+
Sbjct: 2589 CGRGGWCY 2596
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 EGHFCHD 9
E HF HD
Sbjct: 293 ESHFQHD 299
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 EGHFCHD 9
E HF HD
Sbjct: 293 ESHFQHD 299
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 6 FCHD 9
FCHD
Sbjct: 116 FCHD 119
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 2 GEGHFCHD 9
G FCHD
Sbjct: 149 GGSLFCHD 156
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GEGHFCHD 9
G FCHD
Sbjct: 80 GGSLFCHD 87
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GEGHFCHD 9
G FCHD
Sbjct: 149 GGSLFCHD 156
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 4 GHFCHD 9
GH+C D
Sbjct: 447 GHYCCD 452
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 6 FCHD 9
FCHD
Sbjct: 2023 FCHD 2026
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 GEGHF 6
GEGHF
Sbjct: 311 GEGHF 315
Query: 2 GEGHFCHDN 10
G+ HF DN
Sbjct: 653 GQQHFLKDN 661
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GHFCHD 9
GH+C D
Sbjct: 436 GHYCCD 441
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 6 FCHD 9
FCHD
Sbjct: 2073 FCHD 2076
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 2 GEGHFCHD 9
GH+ HD
Sbjct: 318 ARGHYYHD 325
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 CGEGHFCHD 9
C + HF HD
Sbjct: 823 CLKVHFNHD 831
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 2 GEGHFCHD 9
G HF HD
Sbjct: 315 GRVHFYHD 322
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 2 GEGHFCHD 9
G HF HD
Sbjct: 324 GRVHFYHD 331
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 1 CGEGHFCHDN 10
CG FC +
Sbjct: 178 CGPKSFCQSD 187
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CGEGHFCHDN 10
CG FC +
Sbjct: 178 CGPKSFCQSD 187
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 1 CGEGHFCHDN 10
CG FC +
Sbjct: 178 CGPKSFCQSD 187
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 6 FCHD 9
FCHD
Sbjct: 2023 FCHD 2026
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 6 FCHD 9
FCHD
Sbjct: 2073 FCHD 2076
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 3 EGHFCH 8
+GH CH
Sbjct: 150 QGHVCH 155
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 GEGHFCHD 9
G GH HD
Sbjct: 172 GRGHRLHD 179
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CGEGHFCHD 9
C GH C D
Sbjct: 463 CPWGHSCPD 471
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CGEGHFCHD 9
C GH C D
Sbjct: 463 CPWGHSCPD 471
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CGEGHFCHD 9
C GH C D
Sbjct: 463 CPWGHSCPD 471
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CGEGHFCHD 9
C GH C D
Sbjct: 463 CPWGHSCPD 471
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CGEGHFCHD 9
C GH C D
Sbjct: 463 CPWGHSCPD 471
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CGEGHFCHD 9
C GH C D
Sbjct: 463 CPWGHSCPD 471
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CGEGHFCHD 9
C GH C D
Sbjct: 463 CPWGHSCPD 471
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 5 HFCHDN 10
HF HD+
Sbjct: 115 HFLHDD 120
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GHFC 7
GHFC
Sbjct: 209 GHFC 212
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GHFC 7
GHFC
Sbjct: 209 GHFC 212
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 CGEGHF 6
CG G F
Sbjct: 349 CGSGRF 354
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 GEGHFCH 8
GEG F H
Sbjct: 102 GEGFFKH 108
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 GEGHFCH 8
GEG F H
Sbjct: 102 GEGFFKH 108
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 2 GEGHFCH 8
GEG F H
Sbjct: 102 GEGFFKH 108
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 GHFC 7
GHFC
Sbjct: 886 GHFC 889
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGEGHF 6
C EG+F
Sbjct: 221 CNEGNF 226
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGEGHF 6
C EG+F
Sbjct: 220 CNEGNF 225
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 3 EGHFCHDN 10
E FCH++
Sbjct: 103 EDLFCHED 110
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 3 EGHFCHDN 10
E FCH++
Sbjct: 103 EDLFCHED 110
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 1 CGEGHFCH 8
CG HF H
Sbjct: 144 CGRKHFFH 151
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 1 CGEGHF 6
C EG+F
Sbjct: 116 CNEGYF 121
106|Sequence|526|535|FCHDNQTCCR
>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 CHDNQTCCR 10
CH +TC R
Sbjct: 29 CHSEKTCAR 37
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 CHDNQTCC 9
C D + CC
Sbjct: 319 CRDQELCC 326
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 CHDNQTCC 9
C D + CC
Sbjct: 319 CRDQELCC 326
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FCHDNQTC 8
FC+ N TC
Sbjct: 278 FCNQNYTC 285
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 5 NQTCCR 10
N+TCCR
Sbjct: 188 NKTCCR 193
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FCHDNQTC 8
FC+ N TC
Sbjct: 278 FCNQNYTC 285
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 NQTCCR 10
N TCCR
Sbjct: 290 NDTCCR 295
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 HDNQTC 8
HD++TC
Sbjct: 136 HDDETC 141
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 5 NQTCCR 10
N+TCC+
Sbjct: 190 NKTCCK 195
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 1 FCHDNQTCC 9
F H Q CC
Sbjct: 378 FNHHAQRCC 386
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 4 DNQTCC 9
+N+TCC
Sbjct: 196 NNKTCC 201
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 HDNQTCC 9
HD+ CC
Sbjct: 2416 HDSVVCC 2422
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 5 NQTCCR 10
N+TCC+
Sbjct: 191 NKTCCK 196
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 5 NQTCC 9
N+TCC
Sbjct: 190 NKTCC 194
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HDNQTC 8
H NQTC
Sbjct: 191 HFNQTC 196
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 HDNQTC 8
H NQTC
Sbjct: 190 HFNQTC 195
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HDNQTC 8
H NQTC
Sbjct: 190 HFNQTC 195
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 FCHDN 5
CHDN
Sbjct: 486 LCHDN 490
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FCHDN 5
CHDN
Sbjct: 486 LCHDN 490
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 5 NQTCC 9
N+TCC
Sbjct: 191 NKTCC 195
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CHDNQTC 8
C D++TC
Sbjct: 110 CMDSKTC 116
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 HDNQTCCR 10
HD+ CR
Sbjct: 807 HDSNIVCR 814
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 5 NQTCC 9
N+TCC
Sbjct: 187 NKTCC 191
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 HDNQTC 8
HD+++C
Sbjct: 136 HDDESC 141
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 HDNQTC 8
HD+++C
Sbjct: 136 HDDESC 141
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 HDNQTC 8
HD+++C
Sbjct: 136 HDDESC 141
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 DNQTCC 9
DN CC
Sbjct: 2418 DNVVCC 2423
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 3 HDNQTCCR 10
HD Q C R
Sbjct: 337 HDPQRCTR 344
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 FCHDNQT 7
F HDN T
Sbjct: 618 FKHDNPT 624
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 FCHDNQT 7
F HDN T
Sbjct: 618 FKHDNPT 624
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FCHDNQTCCR 10
CHDN R
Sbjct: 602 ICHDNYYISR 611
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 5 NQTCCR 10
N TCCR
Sbjct: 290 NDTCCR 295
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FCHDNQTCCR 10
CHDN R
Sbjct: 602 ICHDNYYISR 611
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 CHDNQTCCR 10
CH ++ CR
Sbjct: 282 CHGDEVFCR 290
107|Sequence|531|540|QTCCRDNRQG
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 QTCCRD 6
+TCCRD
Sbjct: 193 KTCCRD 198
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 QTCCRD 6
+TCCRD
Sbjct: 186 KTCCRD 191
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 1 QTCCRD 6
+TCCRD
Sbjct: 193 KTCCRD 198
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 QTCCRD 6
+TCCRD
Sbjct: 189 KTCCRD 194
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 QTCCRD 6
+TCC+D
Sbjct: 190 KTCCKD 195
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 QTCCRD 6
+TCC+D
Sbjct: 190 KTCCKD 195
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 QTCCRD 6
+TCC+D
Sbjct: 192 KTCCKD 197
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TCCRDN 7
TC RDN
Sbjct: 135 TCIRDN 140
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 QTCCRDNRQG 10
Q CC NR+
Sbjct: 6113 QKCCMCNRRA 6122
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 CCRDNRQ 9
CCRD+
Sbjct: 230 CCRDHEH 236
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 3 CCRDNR 8
CC +NR
Sbjct: 247 CCNENR 252
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 CCRDNRQ 9
CCRD+
Sbjct: 230 CCRDHEH 236
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 QTCCRD 6
+TCC D
Sbjct: 188 KTCCND 193
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 QTCCRD 6
+TCC D
Sbjct: 189 KTCCND 194
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 QTCCRD 6
+TCC D
Sbjct: 191 KTCCND 196
>sp|GQ2_HHV6Z|GLYCOPROTEIN Q2|Human herpesvirus 6B (strain Z29)
Query: 3 CCRDNR 8
C RDNR
Sbjct: 140 CHRDNR 145
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TCCRDNR 8
T C DNR
Sbjct: 123 TSCEDNR 129
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TCCRDNR 8
T C DNR
Sbjct: 123 TSCEDNR 129
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 TCCR 5
TCCR
Sbjct: 478 TCCR 481
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 TCCR 5
TCCR
Sbjct: 478 TCCR 481
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 TCCR 5
TCCR
Sbjct: 478 TCCR 481
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 2 TCCR 5
TCCR
Sbjct: 478 TCCR 481
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 2 TCCR 5
TCCR
Sbjct: 478 TCCR 481
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 2 TCCR 5
TCCR
Sbjct: 478 TCCR 481
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 2 TCCR 5
TCCR
Sbjct: 478 TCCR 481
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 3 CCRDNR 8
C RDNR
Sbjct: 574 CHRDNR 579
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 QTCCRDNRQG 10
Q+ R+NR G
Sbjct: 350 QSLVRENRSG 359
>sp|F_HCV1|F protein|Hepatitis C virus genotype 1a
Query: 2 TCCR 5
TCCR
Sbjct: 36 TCCR 39
>sp|F_HCV77|F protein|Hepatitis C virus genotype 1a
Query: 2 TCCR 5
TCCR
Sbjct: 36 TCCR 39
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TCCR 5
TCCR
Sbjct: 292 TCCR 295
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 TCCRDN 7
TC RDN
Sbjct: 536 TCGRDN 541
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 TCCRDN 7
TC RDN
Sbjct: 536 TCGRDN 541
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 QTCCRD 6
+TCC D
Sbjct: 216 KTCCSD 221
108|Sequence|536|545|DNRQGWACCP
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 4 QGWACC 9
+GW CC
Sbjct: 322 EGWVCC 327
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 2 NRQGWACCP 10
N +GW C P
Sbjct: 296 NSRGWVCHP 304
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 2 NRQGWACCP 10
N +GW C P
Sbjct: 296 NSRGWVCHP 304
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 2 NRQGWACCP 10
N +GW C P
Sbjct: 296 NSRGWVCHP 304
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 2 NRQGWACCP 10
N +GW C P
Sbjct: 296 NSRGWVCHP 304
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 2 NRQGWACCP 10
N +GW C P
Sbjct: 296 NSRGWVCHP 304
>sp|M2_I85A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWGC 17
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NRQGWACC 9
+R+G+ CC
Sbjct: 308 HREGFLCC 315
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 DNRQGWAC 8
D R+GW C
Sbjct: 253 DRRRGWPC 260
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NRQGWACC 9
+R+G+ CC
Sbjct: 308 HREGFLCC 315
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NRQGWACC 9
+R+G+ CC
Sbjct: 308 HREGFLCC 315
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NRQGWACC 9
+R+G+ CC
Sbjct: 308 HREGFLCC 315
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 3 RQGWACCP 10
+ GW+C P
Sbjct: 295 KGGWSCHP 302
>sp|A40_VAR67|PROTEIN A40 homolog|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 NRQGWACC 9
N G+ACC
Sbjct: 9 NYAGYACC 16
>sp|M2_I97A1|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWGC 17
>sp|M2_I97A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWGC 17
>sp|NP_ADE40|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus F serotype 40
Query: 1 DNRQGWACC 9
DN GW C
Sbjct: 8 DNNTGWGLC 16
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 1 DNRQGWACCP 10
DN Q + C P
Sbjct: 630 DNSQAFRCVP 639
>sp|M2_I80A2|MATRIX protein 2|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWEC 17
>sp|M2_I82A7|MATRIX protein 2|Influenza A virus (strain A/Swine/Hong
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWEC 17
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GWACC 9
GWA C
Sbjct: 54 GWAAC 58
>sp|M2_I02A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWEC 17
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 DNRQGWACCP 10
DN Q + C P
Sbjct: 627 DNSQAFRCVP 636
>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus
Query: 6 WACCP 10
WAC P
Sbjct: 531 WACFP 535
>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)
Query: 6 WACCP 10
WAC P
Sbjct: 531 WACFP 535
>sp|M2_I78A3|MATRIX protein 2|Influenza A virus (strain A/Mallard/New
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWEC 17
>sp|M2_I77A9|MATRIX protein 2|Influenza A virus (strain A/Equine/New
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWEC 17
>sp|M2_I85A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWEC 17
>sp|M2_I000F|MATRIX protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWEC 17
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 1 DNRQGW 6
DN+Q W
Sbjct: 627 DNQQNW 632
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 1 DNRQGW 6
DN+Q W
Sbjct: 627 DNQQNW 632
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 1 DNRQGW 6
DN+Q W
Sbjct: 627 DNQQNW 632
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 1 DNRQGW 6
DN+Q W
Sbjct: 627 DNQQNW 632
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 1 DNRQGW 6
DN+Q W
Sbjct: 627 DNQQNW 632
>sp|M2_I02A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWEC 17
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 DNRQGWACCP 10
++R W CP
Sbjct: 669 EHRNLWITCP 678
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 4 QGWACCP 10
Q W CP
Sbjct: 309 QEWEACP 315
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 1 DNRQGW 6
DN GW
Sbjct: 550 DNESGW 555
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 DNRQGW 6
DN GW
Sbjct: 550 DNESGW 555
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DNRQGW 6
DN GW
Sbjct: 550 DNESGW 555
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DNRQGW 6
DN GW
Sbjct: 550 DNESGW 555
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 1 DNRQGW 6
DN GW
Sbjct: 550 DNESGW 555
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GWAC 8
GWAC
Sbjct: 376 GWAC 379
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GWAC 8
GWAC
Sbjct: 376 GWAC 379
>sp|M2_I59A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 RQGWAC 8
R GW C
Sbjct: 12 RNGWEC 17
>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 WACC 9
W+CC
Sbjct: 8 WSCC 11
>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 WACC 9
W+CC
Sbjct: 8 WSCC 11
>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 WACC 9
W+CC
Sbjct: 8 WSCC 11
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 6 WACCP 10
WAC P
Sbjct: 322 WACVP 326
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 NRQGWACC 9
N + WA C
Sbjct: 3870 NSRAWAFC 3877
>sp|A40_VACCC|PROTEIN A40|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 GWACC 9
G+ACC
Sbjct: 10 GYACC 14
>sp|VE8E2_HPV54|PROTEIN E8^E2C|Human papillomavirus type 54
Query: 6 WACCP 10
WAC P
Sbjct: 130 WACVP 134
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 NRQGWACC 9
N + WA C
Sbjct: 3870 NSRAWAFC 3877
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 GWACCP 10
GW C P
Sbjct: 767 GWGCNP 772
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 GWACCP 10
GW C P
Sbjct: 772 GWGCNP 777
>sp|ORF58_HHV8P|PROTEIN ORF58|Human herpesvirus 8 type P
Query: 4 QGWACC 9
Q WA C
Sbjct: 210 QAWAYC 215
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 5 GWACCP 10
GW C P
Sbjct: 772 GWGCNP 777
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 5 GWACCP 10
GW C P
Sbjct: 765 GWGCNP 770
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 5 GWACCP 10
GW C P
Sbjct: 772 GWGCNP 777
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 GWACCP 10
GW C P
Sbjct: 772 GWGCNP 777
>sp|PB1F2_I73A5|PROTEIN PB1-F2|Influenza A virus (strain A/Port
Query: 2 NRQGW 6
N+QGW
Sbjct: 84 NKQGW 88
>sp|PB1F2_I80A4|PROTEIN PB1-F2|Influenza A virus (strain A/Memphis/4/1980
Query: 2 NRQGW 6
N+QGW
Sbjct: 84 NKQGW 88
>sp|PB1F2_I71A1|PROTEIN PB1-F2|Influenza A virus (strain A/Memphis/1/1971
Query: 2 NRQGW 6
N+QGW
Sbjct: 84 NKQGW 88
>sp|PB1F2_I75A0|PROTEIN PB1-F2|Influenza A virus (strain A/Beijing/39/1975
Query: 2 NRQGW 6
N+QGW
Sbjct: 84 NKQGW 88
>sp|PB1F2_I76A6|PROTEIN PB1-F2|Influenza A virus (strain A/Memphis/110/1976
Query: 2 NRQGW 6
N+QGW
Sbjct: 84 NKQGW 88
>sp|PB1F2_I83A8|PROTEIN PB1-F2|Influenza A virus (strain A/Hong
Query: 2 NRQGW 6
N+QGW
Sbjct: 84 NKQGW 88
>sp|PB1F2_I77A4|PROTEIN PB1-F2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 NRQGW 6
N+QGW
Sbjct: 84 NKQGW 88
>sp|UL135_HCMVM|PROTEIN UL135|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DNRQGWACC 9
D R ACC
Sbjct: 50 DKRGACACC 58
>sp|PB1F2_I72A4|PROTEIN PB1-F2|Influenza A virus (strain A/Memphis/101/1972
Query: 2 NRQGW 6
N+QGW
Sbjct: 84 NKQGW 88
>sp|PB1F2_I72A3|PROTEIN PB1-F2|Influenza A virus (strain A/Memphis/102/1972
Query: 2 NRQGW 6
N+QGW
Sbjct: 84 NKQGW 88
109|Sequence|541|550|WACCPYRQGV
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 ACCPYR 7
CCPY+
Sbjct: 446 GCCPYK 451
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 ACCPYR 7
CCPY+
Sbjct: 512 GCCPYK 517
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 ACCPYR 7
CCPY+
Sbjct: 385 GCCPYK 390
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 WACCPYRQGV 10
WA P RQ +
Sbjct: 63 WATVPVRQAI 72
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 WACCPYRQGV 10
WA P RQ +
Sbjct: 63 WATVPVRQAI 72
>sp|NSP5_ROTHC|NON-STRUCTURAL protein 5|Rotavirus C (isolate RVC/Human/United
Query: 4 CPYRQ 8
CPYR+
Sbjct: 188 CPYRE 192
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 CCPYRQ 8
CC +RQ
Sbjct: 417 CCAFRQ 422
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 3 CCPYRQ 8
CC +RQ
Sbjct: 417 CCAFRQ 422
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 CCPY 6
CCPY
Sbjct: 918 CCPY 921
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WACCPYRQG 9
WAC R+G
Sbjct: 377 WACANPRRG 385
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WACCPYRQG 9
WAC R+G
Sbjct: 377 WACANPRRG 385
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 WACCPYRQGV 10
W C YR +
Sbjct: 2542 WKCFTYRHNL 2551
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 WACCPYRQGV 10
W C YR +
Sbjct: 2515 WKCFTYRHNL 2524
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 WACCPYRQGV 10
W C YR +
Sbjct: 2520 WKCFTYRHNL 2529
>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)
Query: 4 CPYRQ 8
CP+RQ
Sbjct: 25 CPHRQ 29
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 CPYRQGV 10
CPYR V
Sbjct: 2708 CPYRPKV 2714
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 3 CCPYRQ 8
CC Y+Q
Sbjct: 174 CCLYKQ 179
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)
Query: 1 WACCPYRQ 8
WA C + +
Sbjct: 243 WASCAFEE 250
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 WACCPYRQ 8
WA C + +
Sbjct: 243 WASCAFEE 250
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 2 ACCPY 6
A CPY
Sbjct: 151 AACPY 155
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 2 ACCPY 6
A CPY
Sbjct: 151 AACPY 155
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 WACCPYRQ 8
WA C + +
Sbjct: 243 WASCTFEE 250
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 2 ACCPY 6
A CPY
Sbjct: 151 AACPY 155
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 ACCPY 6
A CPY
Sbjct: 151 AACPY 155
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 4 CPYRQGV 10
CPY Q V
Sbjct: 121 CPYHQRV 127
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 4 CPYRQGV 10
CPY Q V
Sbjct: 121 CPYHQRV 127
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 4 CPYRQGV 10
CPY Q V
Sbjct: 121 CPYHQRV 127
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 4 CPYRQGV 10
CPY Q +
Sbjct: 125 CPYHQQI 131
>sp|UL40_HCMVM|PROTEIN UL40|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WACCPYRQG 9
WA Y QG
Sbjct: 64 WAYAVYHQG 72
110|Sequence|546|555|YRQGVCCADR
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 YRQGVCCA 8
YRQG CCA
Sbjct: 434 YRQG-CCA 440
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 YRQGVC 6
YRQG C
Sbjct: 435 YRQGAC 440
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3226 YREAACC 3232
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3203 YREAACC 3209
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3226 YREAACC 3232
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YRQGVCC 7
YR+ CC
Sbjct: 3203 YREAACC 3209
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 RQGVCCAD 9
R+GVC D
Sbjct: 212 REGVCITD 219
>sp|VIL6_HHV8P|VIRAL interleukin-6 homolog|Human herpesvirus 8 type P
Query: 1 YRQGVC 6
YR G+C
Sbjct: 55 YRTGIC 60
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 YRQGVC 6
Y++G+C
Sbjct: 836 YKEGIC 841
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 YRQGVCC 7
YR CC
Sbjct: 2662 YRPSECC 2668
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 YRQGVCC 7
YR CC
Sbjct: 2662 YRPSECC 2668
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 GVCCAD 9
G CC D
Sbjct: 208 GYCCLD 213
111|Sequence|551|560|CCADRRHCCP
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 CCADRRH 7
CC DR+H
Sbjct: 531 CCIDRKH 537
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 CCADRRH 7
CC DR+H
Sbjct: 535 CCIDRKH 541
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 6 RHCC 9
RHCC
Sbjct: 620 RHCC 623
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 6 RHCC 9
RHCC
Sbjct: 620 RHCC 623
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 RHCC 9
RHCC
Sbjct: 620 RHCC 623
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 6 RHCC 9
RHCC
Sbjct: 620 RHCC 623
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 CADRRHCCP 10
C DR + CP
Sbjct: 1984 CLDRANFCP 1992
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2048 CCLDTASFCP 2057
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2034 CCLDTASFCP 2043
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2042 CCLDTASFCP 2051
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2042 CCLDTASFCP 2051
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 1 CCADRRHC 8
CC ++HC
Sbjct: 174 CCLYKQHC 181
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2043 CCLDTATFCP 2052
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2023 CCLDTATFCP 2032
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2020 CCLDTATFCP 2029
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 CCADRRHCCP 10
CC D CP
Sbjct: 2016 CCLDTATFCP 2025
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 CADRRHCC 9
C++R CC
Sbjct: 452 CSERLACC 459
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 2 CADRRH 7
C DR+H
Sbjct: 578 CVDRKH 583
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 3 ADRRHCCP 10
A+++HC P
Sbjct: 61 AEKQHCGP 68
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 CCADR 5
CC DR
Sbjct: 2070 CCPDR 2074
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 CCADRRHCC 9
C A ++ CC
Sbjct: 530 CAALKKECC 538
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 DRRHCC 9
D+R CC
Sbjct: 672 DQRRCC 677
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 2 CADRRH 7
C DR+H
Sbjct: 547 CLDRKH 552
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 4 DRRHCC 9
D+R CC
Sbjct: 672 DQRRCC 677
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 CADRRHCCP 10
C DR CP
Sbjct: 2014 CLDRATFCP 2022
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 3 ADRRHCCP 10
A+++HC P
Sbjct: 255 AEKQHCGP 262
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 CADRRHC 8
C D R+C
Sbjct: 142 CGDPRNC 148
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CADRRHC 8
C D R+C
Sbjct: 142 CGDPRNC 148
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 CADRRHCCP 10
C DR CP
Sbjct: 2027 CLDRATFCP 2035
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 CADRRHCCP 10
C DR CP
Sbjct: 696 CLDRATFCP 704
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ADRRHC 8
ADRR C
Sbjct: 1623 ADRRWC 1628
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ADRRHC 8
ADRR C
Sbjct: 2033 ADRRWC 2038
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ADRRHC 8
ADRR C
Sbjct: 2033 ADRRWC 2038
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ADRRHC 8
ADRR C
Sbjct: 2033 ADRRWC 2038
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ADRRHC 8
ADRR C
Sbjct: 2033 ADRRWC 2038
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 ADRRHC 8
ADRR C
Sbjct: 2033 ADRRWC 2038
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ADRRHC 8
ADRR C
Sbjct: 2033 ADRRWC 2038
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 ADRRHC 8
ADRR C
Sbjct: 2033 ADRRWC 2038
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 CADRRHCCP 10
C DR CP
Sbjct: 1976 CLDRATFCP 1984
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 CCADRRH 7
CCA R H
Sbjct: 747 CCAPRAH 753
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 CCADRRH 7
CCA R H
Sbjct: 747 CCAPRAH 753
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka
Query: 1 CCADRRHC 8
CC + HC
Sbjct: 61 CCGELIHC 68
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 CCADRRHC 8
CC + HC
Sbjct: 61 CCGELIHC 68
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 2 CADRRH 7
C DR+H
Sbjct: 544 CLDRKH 549
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 2 CADRRH 7
C DR+H
Sbjct: 557 CIDRKH 562
>sp|GN_HCMVM|ENVELOPE glycoprotein N|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CADRRHCC 9
C RHCC
Sbjct: 116 CIVLRHCC 123
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 CCADRRHC 8
CC RHC
Sbjct: 918 CCPYCRHC 925
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 CADRRH 7
C DR+H
Sbjct: 529 CFDRKH 534
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 2 CADRRH 7
C DR+H
Sbjct: 556 CIDRKH 561
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 2 CADRRH 7
C DR+H
Sbjct: 559 CIDRKH 564
>sp|GN_HCMVA|ENVELOPE glycoprotein N|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CADRRHCC 9
C RHCC
Sbjct: 119 CIVLRHCC 126
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 CCADRRHCC 9
C A + CC
Sbjct: 530 CAALKEECC 538
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 CCADRRHCCP 10
C DR C P
Sbjct: 1440 CVGDRDQCGP 1449
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 CCADRRHCC 9
C A + CC
Sbjct: 530 CAALKEECC 538
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 CCADRRHCCP 10
C DR C P
Sbjct: 1440 CVGDRDQCGP 1449
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 CCADRRHCCP 10
C DR C P
Sbjct: 1440 CVGDRDQCGP 1449
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 CCADRRHCCP 10
C DR C P
Sbjct: 1440 CVGDRDQCGP 1449
>sp|VE4_HPV42|PROTEIN E4|Human papillomavirus 42
Query: 2 CADRRHCCP 10
CA + HC P
Sbjct: 26 CAPQTHCTP 34
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 CCADRRHCCP 10
C DR C P
Sbjct: 1440 CVGDRDQCGP 1449
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 CCADRRHCCP 10
C DR C P
Sbjct: 1440 CVGDRDQCGP 1449
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 CCADRRHCCP 10
C DR C P
Sbjct: 1440 CVGDRDQCGP 1449
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 CCADRRHCCP 10
C DR C P
Sbjct: 1440 CVGDRDQCGP 1449
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 CCADRRHCCP 10
C DR C P
Sbjct: 1440 CVGDRDQCGP 1449
112|Sequence|556|565|RHCCPAGFRC
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 224 RYCAPPGFALLRC 236
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 225 RYCAPPGFFLLRC 237
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 218 YCAPAGF 224
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 229 YCAPAGF 235
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 219 YCAPAGF 225
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 218 YCAPAGF 224
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 213 YCAPAGF 219
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 220 YCAPAGF 226
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 213 YCAPAGF 219
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 218 YCAPAGF 224
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 211 YCAPAGF 217
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 215 YCAPAGF 221
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 222 YCAPAGF 228
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 215 YCAPAGF 221
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 222 YCAPAGF 228
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 218 YCAPAGF 224
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 215 YCAPAGF 221
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 229 YCAPAGF 235
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 218 YCAPAGF 224
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 222 YCAPAGF 228
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 215 YCAPAGF 221
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 225 YCAPAGF 231
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 219 YCAPAGF 225
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 210 YCAPAGF 216
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 215 RYCAPPGFALLRC 227
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 217 YCAPAGF 223
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 216 RYCAPPGFVLLRC 228
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 214 YCAPAGF 220
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 4 CPAGFRC 10
CPA RC
Sbjct: 1991 CPAKLRC 1997
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 219 RYCAPPGFALLRC 231
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 224 RYCAPPGFAILRC 236
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 219 YCVPAGF 225
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 230 YCTPAGF 236
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 222 YCTPAGF 228
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 224 YCTPAGF 230
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 220 YCTPAGF 226
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 225 RYCAPPGFALLRC 237
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 214 RYCAPPGFALLRC 226
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 4 CPAGFRC 10
CPA RC
Sbjct: 703 CPAKLRC 709
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 4 CPAGFRC 10
CPA RC
Sbjct: 2021 CPAKLRC 2027
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 4 CPAGFRC 10
CPA RC
Sbjct: 2021 CPAKLRC 2027
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 4 CPAGFRC 10
CPA RC
Sbjct: 2034 CPAKLRC 2040
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P GF RC
Sbjct: 219 RYCAPPGFALLRC 231
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 CPAGFRC 10
CPA RC
Sbjct: 1983 CPAKLRC 1989
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 CCPAGF 8
C PAGF
Sbjct: 213 CAPAGF 218
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAG---FRC 10
+C PAG F+C
Sbjct: 213 YCAPAGYAIFKC 224
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P G+ RC
Sbjct: 224 RYCAPPGYALLRC 236
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 212 YCAPAGF 218
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 RHCCPAGF 8
R C PA F
Sbjct: 935 RRCVPANF 942
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 RHCCPAGF 8
R C PA F
Sbjct: 934 RRCVPANF 941
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 RHCCPAGF 8
R C PA F
Sbjct: 933 RRCVPANF 940
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 RHCCPAGF 8
R C PA F
Sbjct: 954 RRCVPANF 961
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAGF
Sbjct: 214 YCAPAGF 220
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAG+
Sbjct: 208 YCAPAGY 214
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAG+
Sbjct: 217 YCAPAGY 223
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAG+
Sbjct: 214 YCAPAGY 220
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAG+
Sbjct: 219 YCAPAGY 225
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C PAG+
Sbjct: 215 YCAPAGY 221
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P G+ RC
Sbjct: 225 RYCAPPGYALLRC 237
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAGF---RC 10
R+C P G+ RC
Sbjct: 216 RYCAPPGYALLRC 228
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 CCPAG 7
CCP G
Sbjct: 1640 CCPIG 1644
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C P GF
Sbjct: 228 YCTPTGF 234
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C P GF
Sbjct: 210 YCAPPGF 216
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAGF 8
+C P GF
Sbjct: 209 YCAPPGF 215
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RHCCPAG---FRC 10
R+C P G RC
Sbjct: 217 RYCAPPGLCLLRC 229
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 HCCPAG---FRC 10
+C P G F+C
Sbjct: 217 YCAPTGYAIFKC 228
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 5 PAGFRC 10
P+GF C
Sbjct: 1578 PSGFPC 1583
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 5 PAGFRC 10
P+GF C
Sbjct: 1579 PSGFPC 1584
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 RHCCP 5
+ CCP
Sbjct: 1403 KRCCP 1407
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 RHCCP 5
+ CCP
Sbjct: 1403 KRCCP 1407
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 RHCCP 5
+ CCP
Sbjct: 1404 KRCCP 1408
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 RHCCP 5
+ CCP
Sbjct: 1404 KRCCP 1408
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 RHCCP 5
+ CCP
Sbjct: 1406 KRCCP 1410
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 RHCCP 5
+ CCP
Sbjct: 1406 KRCCP 1410
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 RHCCP 5
+ CCP
Sbjct: 1388 KRCCP 1392
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 RHCCP 5
+ CCP
Sbjct: 1387 KRCCP 1391
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 RHCCP 5
+ CCP
Sbjct: 1389 KRCCP 1393
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 RHCCP 5
+ CCP
Sbjct: 1379 KRCCP 1383
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 RHCCP 5
+ CCP
Sbjct: 1377 KRCCP 1381
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPAG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPAG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPAG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPAG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPAG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPAG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 HCCPAG 7
H CP G
Sbjct: 467 HSCPDG 472
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 CCPAGFR 9
CPA FR
Sbjct: 586 LCPAAFR 592
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RHCCP 5
RH CP
Sbjct: 349 RHLCP 353
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RHCCP 5
RH CP
Sbjct: 349 RHLCP 353
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 RHCCP 5
+ CCP
Sbjct: 1397 KRCCP 1401
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 CCPAGF 8
CC GF
Sbjct: 261 CCNEGF 266
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 HCCPAGFRC 10
H C +RC
Sbjct: 155 HTCNLSWRC 163
>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CPAGF 8
CP GF
Sbjct: 255 CPRGF 259
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CPAGF 8
CP GF
Sbjct: 257 CPRGF 261
113|Sequence|561|570|AGFRCAARGT
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 2 GFRCAARGT 10
FRC AR T
Sbjct: 595 AFRCVARST 603
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 4 RCAARGT 10
+CA+RGT
Sbjct: 263 QCASRGT 269
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 AGFRCAA 7
AGF CAA
Sbjct: 1031 AGFVCAA 1037
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 5 CAARGT 10
CA RGT
Sbjct: 423 CAIRGT 428
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 AGFRCAA 7
AGF CAA
Sbjct: 1031 AGFVCAA 1037
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 AGFRCAA 7
AGF CAA
Sbjct: 1031 AGFVCAA 1037
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 5 CAARGT 10
CA RGT
Sbjct: 423 CAIRGT 428
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 AGFRCAA 7
AGF CAA
Sbjct: 1031 AGFVCAA 1037
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 AGFRCAA 7
AGF CAA
Sbjct: 1031 AGFVCAA 1037
114|Sequence|566|575|AARGTKCLRR
>sp|UL147_HCMVT|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Towne)
Query: 3 RGTKCL 8
+GTKCL
Sbjct: 89 KGTKCL 94
>sp|UL147_HCMVM|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Merlin)
Query: 3 RGTKCL 8
+GTKCL
Sbjct: 89 KGTKCL 94
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 GTKCLR 9
G+KC+R
Sbjct: 1628 GSKCVR 1633
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 GTKCLR 9
G+KC+R
Sbjct: 1626 GSKCVR 1631
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 4 GTKCLR 9
G+KC+R
Sbjct: 1628 GSKCVR 1633
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 4 GTKCLR 9
G+KC+R
Sbjct: 1625 GSKCVR 1630
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 GTKCLR 9
G+KC+R
Sbjct: 1625 GSKCVR 1630
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 4 GTKCLR 9
G+KC+R
Sbjct: 1616 GSKCVR 1621
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 4 GTKCLR 9
G+KC+R
Sbjct: 1624 GSKCVR 1629
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 2 ARGTKCLRR 10
A+GT C R
Sbjct: 231 AKGTACKSR 239
>sp|VPX_HV2EH|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 ARGTKCLR 9
A+G CLR
Sbjct: 83 AKGCGCLR 90
>sp|VU25_HHV6U|PROTEIN U25|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 RGTKCLRR 10
RG C+ R
Sbjct: 308 RGVNCIER 315
115|Sequence|571|580|KCLRREAPRW
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 CLRREAPRW 10
C RR P W
Sbjct: 330 CRRRRRPSW 338
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 CLRREAPRW 10
C RR P W
Sbjct: 330 CRRRRRPSW 338
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 4 RREAPRW 10
RREAP++
Sbjct: 108 RREAPQY 114
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 4 RREAPRW 10
RREAP++
Sbjct: 108 RREAPQY 114
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LRREAPR 9
+RRE PR
Sbjct: 501 VRREVPR 507
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LRREAPR 9
+RRE PR
Sbjct: 501 VRREVPR 507
>sp|PG121_VAR67|MRNA-DECAPPING protein OPG121|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CLRRE 6
CLRRE
Sbjct: 122 CLRRE 126
>sp|PG121_VACCC|MRNA-DECAPPING protein OPG121|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CLRRE 6
CLRRE
Sbjct: 122 CLRRE 126
>sp|PG121_MONPV|MRNA-DECAPPING protein OPG121|Monkeypox virus (MPXV)
Query: 2 CLRRE 6
CLRRE
Sbjct: 122 CLRRE 126
>sp|D9_VARV|MRNA-DECAPPING protein D9|Variola virus
Query: 2 CLRRE 6
CLRRE
Sbjct: 122 CLRRE 126
>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 4 RREAPRW 10
RRE PR+
Sbjct: 108 RRELPRF 114
>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 4 RREAPRW 10
RRE PR+
Sbjct: 108 RRELPRF 114
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 4 RREAPRW 10
RRE PR+
Sbjct: 108 RRELPRF 114
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 KCLRREAP 8
KC RE P
Sbjct: 1350 KCCTREVP 1357
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 KCLRREAP 8
KC RE P
Sbjct: 1350 KCCTREVP 1357
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 3 LRREAPRW 10
RRE P W
Sbjct: 328 FRREQPEW 335
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LRREAPRW 10
RRE P W
Sbjct: 315 FRREQPEW 322
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 KCLRREAPR 9
+C++ ++PR
Sbjct: 1112 ECVKSQSPR 1120
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 KCLRREAPR 9
+C++ ++PR
Sbjct: 1112 ECVKSQSPR 1120
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 KCLRREAPR 9
+C++ ++PR
Sbjct: 1116 ECVKSQSPR 1124
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 KCLRREAPRW 10
KCL + P W
Sbjct: 464 KCLISDLPLW 473
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 KCLRREAPRW 10
KCL + P W
Sbjct: 464 KCLISDLPLW 473
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 KCLRREAPRW 10
KCL + P W
Sbjct: 464 KCLISDLPLW 473
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 1 KCLRREAPRW 10
K +RRE+P++
Sbjct: 381 KRVRRESPKY 390
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 KCLRREAPRW 10
KCL + P W
Sbjct: 464 KCLISDLPLW 473
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 KCLRREAPR 9
+CLRR+ R
Sbjct: 1147 ECLRRKVTR 1155
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 KCLRRE 6
KC++RE
Sbjct: 673 KCVKRE 678
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 CLRREAPR 9
CL R +PR
Sbjct: 227 CLIRHSPR 234
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 CLRREAPR 9
CL R +PR
Sbjct: 227 CLIRHSPR 234
116|Sequence|576|585|EAPRWDAPLR
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 1 EAPRWDAPLR 10
E PRW+ LR
Sbjct: 279 ECPRWNQQLR 288
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 APRWD 6
APRWD
Sbjct: 1157 APRWD 1161
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 EAPRWDAPLR 10
E +W+ P+R
Sbjct: 383 EMEKWNGPVR 392
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 3 PRWDAP 8
P+WD P
Sbjct: 462 PQWDTP 467
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 2 APRWD 6
APRWD
Sbjct: 296 APRWD 300
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EAPRWDA 7
E PRWDA
Sbjct: 527 ERPRWDA 533
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 EAPRWDAP 8
E PR+D P
Sbjct: 152 EIPRFDIP 159
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 EAPRWDAP 8
E PR+D P
Sbjct: 152 EIPRFDIP 159
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 EAPRWDAP 8
E PR+D P
Sbjct: 152 EIPRFDIP 159
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EAPRWDA 7
E PRWDA
Sbjct: 526 ERPRWDA 532
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EAPRWDA 7
E PRWDA
Sbjct: 527 ERPRWDA 533
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EAPRWDA 7
E PRWDA
Sbjct: 526 ERPRWDA 532
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 1 EAPRWD 6
E P+WD
Sbjct: 205 EGPQWD 210
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 EAPRWD 6
E P+WD
Sbjct: 205 EGPQWD 210
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 5 WDAPL 9
WDAP+
Sbjct: 285 WDAPV 289
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 PRWDAP 8
P WD+P
Sbjct: 462 PLWDSP 467
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 WDAPL 9
WD+PL
Sbjct: 71 WDSPL 75
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 WDAPL 9
WD+PL
Sbjct: 71 WDSPL 75
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 APRWDAP 8
APR DAP
Sbjct: 498 APRCDAP 504
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 PRWDAPLR 10
P W++P R
Sbjct: 345 PTWESPAR 352
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 PRWDAPLR 10
P W++P R
Sbjct: 345 PTWESPAR 352
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PRWDAPL 9
PRW+ L
Sbjct: 183 PRWNTKL 189
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 PRWDAPLR 10
P W++P R
Sbjct: 345 PTWESPAR 352
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PRWDAPL 9
PRW+ L
Sbjct: 189 PRWNTKL 195
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 4 RWDAP 8
RW+AP
Sbjct: 101 RWNAP 105
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EAPRWDAPL 9
+ P WD P+
Sbjct: 489 QIPLWDRPI 497
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 4 RWDAPLR 10
RW+AP R
Sbjct: 1050 RWEAPGR 1056
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 5 WDAPL 9
WD PL
Sbjct: 1474 WDVPL 1478
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 EAPRWDAPL 9
+ P WD P+
Sbjct: 491 QIPLWDRPI 499
117|Sequence|581|593|DAPLRDPALRQLL
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 LRDPALRQLL 13
+ DPALRQ L
Sbjct: 849 MHDPALRQSL 858
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 LRDPALRQLL 13
+ DPALRQ L
Sbjct: 849 MHDPALRQSL 858
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 LRDPALRQLL 13
+ DPALRQ L
Sbjct: 849 MHDPALRQSL 858
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 LRDPALRQLL 13
+ DPALRQ L
Sbjct: 849 MHDPALRQSL 858
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 LRDPALRQLL 13
+ DPALRQ L
Sbjct: 849 MHDPALRQSL 858
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 LRDPALRQLL 13
+ DPA+RQ L
Sbjct: 839 MHDPAIRQSL 848
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 LRDPALRQLL 13
+ DPA+RQ L
Sbjct: 849 MHDPAIRQSL 858
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 DPALRQLL 13
DPALR+L+
Sbjct: 18 DPALRRLM 25
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 DPALRQLL 13
DPALR+L+
Sbjct: 18 DPALRRLM 25
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 LRDPALRQLL 13
+ DPA+RQ L
Sbjct: 849 MHDPAIRQSL 858
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 3 PLRDPALRQLL 13
P RDP RQ++
Sbjct: 432 PPRDPTERQVI 442
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 3 PLRDPALRQLL 13
P RDP RQ++
Sbjct: 431 PPRDPTERQVI 441
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 3 PLRDPALRQLL 13
P RDP RQ++
Sbjct: 432 PPRDPTERQVI 442
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 2 APLRDPALRQLL 13
A L+DPA R+L+
Sbjct: 74 ANLQDPASRELV 85
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 APLRDPALRQLL 13
A L+DPA R+L+
Sbjct: 103 ANLQDPASRELV 114
>sp|UL24_VZVO|PROTEIN UL24 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 DAPLRDPAL 9
D PLR P+L
Sbjct: 233 DLPLRRPSL 241
>sp|UL24_VZVD|PROTEIN UL24 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DAPLRDPAL 9
D PLR P+L
Sbjct: 233 DLPLRRPSL 241
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 7 PALRQLL 13
PALRQLL
Sbjct: 470 PALRQLL 476
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 7 PALRQLL 13
PALRQLL
Sbjct: 472 PALRQLL 478
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 3 PLRDPALRQL 12
PL DP + L
Sbjct: 569 PLEDPTFKYL 578
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 3 PLRDPALRQLL 13
P RDP RQ++
Sbjct: 463 PPRDPTERQVI 473
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 3 PLRDPALRQLL 13
P RDP RQ++
Sbjct: 463 PPRDPTERQVI 473
>sp|HBEAG_HBVC1|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 105 LEDPASRELV 114
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 DAPLRDPAL 9
DAP +PAL
Sbjct: 1696 DAPALEPAL 1704
>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 76 LEDPASRELV 85
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 105 LEDPASRELV 114
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 105 LEDPASRELV 114
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 105 LEDPASRELV 114
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 105 LEDPASRELV 114
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 105 LEDPASRELV 114
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 6 DPALRQL 12
DP LRQL
Sbjct: 402 DPELRQL 408
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 6 DPALRQL 12
DP LRQL
Sbjct: 402 DPELRQL 408
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 105 LEDPASRELV 114
>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 76 LEDPASRELV 85
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 252 LEDPASRELV 261
>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 76 LEDPASRELV 85
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 DAPLRDPAL 9
D PL+D A+
Sbjct: 494 DLPLQDSAI 502
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 4 LRDPALR 10
LR+P+LR
Sbjct: 1471 LREPSLR 1477
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 4 LRDPALR 10
LR+P+LR
Sbjct: 1471 LREPSLR 1477
>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 76 LEDPASRELV 85
>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 76 LEDPASRELV 85
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 4 LRDPALR 10
LR+P+LR
Sbjct: 1471 LREPSLR 1477
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 LRDPALR 10
LR+P+LR
Sbjct: 1472 LREPSLR 1478
>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 76 LEDPASRELV 85
>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 76 LEDPASRELV 85
>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 76 LEDPASRELV 85
>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 76 LEDPASRELV 85
>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 76 LEDPASRELV 85
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 4 LRDPALR 10
LR+P+LR
Sbjct: 1471 LREPSLR 1477
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 76 LEDPASRELV 85
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 4 LRDPALRQLL 13
L DPA R+L+
Sbjct: 76 LEDPASRELV 85
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 4 LRDPALR 10
LR+P+LR
Sbjct: 1471 LREPSLR 1477
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 LRDPALR 10
LR+P+LR
Sbjct: 1471 LREPSLR 1477
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 4 LRDPALR 10
LR+P+LR
Sbjct: 1471 LREPSLR 1477
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 LRDPALR 10
LR+P+LR
Sbjct: 1471 LREPSLR 1477
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 4 LRDPALR 10
LR+P+LR
Sbjct: 1472 LREPSLR 1478
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 6 DPALRQLL 13
DP +R+LL
Sbjct: 339 DPIIRELL 346
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 6 DPALRQLL 13
DP +R+LL
Sbjct: 339 DPIIRELL 346
>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 1 DAPLRD 6
DAP+RD
Sbjct: 29 DAPVRD 34
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 6 DPALRQLL 13
DP +R+LL
Sbjct: 339 DPIIRELL 346
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 3 PLRDPALRQLL 13
PL+DP QL
Sbjct: 472 PLQDPIQAQLF 482
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 3 PLRDPALRQLL 13
PL+DP QL
Sbjct: 472 PLQDPIQAQLF 482
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 3 PLRDPALRQLL 13
PL+DP QL
Sbjct: 472 PLQDPIQAQLF 482