1|SequenceR|10|1|RALLAGPARM
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 2 ALLAGPARM 10
A L GP+RM
Sbjct: 183 AFLDGPSRM 191
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 ALLAGPARM 10
A L GP+RM
Sbjct: 183 AFLDGPSRM 191
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 ALLAGPARM 10
A L GP+RM
Sbjct: 183 AFLDGPSRM 191
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 ALLAGPARM 10
A L GP+RM
Sbjct: 183 AFLDGPSRM 191
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LLAGPAR 9
+LAGP R
Sbjct: 102 ILAGPIR 108
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 4 LAGPARM 10
+AGP RM
Sbjct: 229 MAGPLRM 235
2|SequenceR|15|6|LLRSMRALLA
***** No hits found ******
3|SequenceR|20|11|LLLLLLLRSM
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 LLLLLLLR 8
++LLLL+R
Sbjct: 266 IILLLLIR 273
4|SequenceR|25|16|SASVKLLLLL
>sp|MC148_MCV1|CHEMOKINE-LIKE protein MC148|Molluscum contagiosum virus subtype 1
Query: 2 ASVKLLLLL 10
ASV L+LLL
Sbjct: 8 ASVVLMLLL 16
5|SequenceR|30|21|VGLASSASVK
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 GLASSASV 9
G+A SASV
Sbjct: 2325 GIAQSASV 2332
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 GLASSASV 9
G+A SASV
Sbjct: 2325 GIAQSASV 2332
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 GLASSASV 9
G+A SASV
Sbjct: 2325 GIAQSASV 2332
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 GLASSASV 9
G+A SASV
Sbjct: 2325 GIAQSASV 2332
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 GLASSASV 9
G+A SASV
Sbjct: 2325 GIAQSASV 2332
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 GLASSASV 9
G+A SASV
Sbjct: 2325 GIAQSASV 2332
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 GLASSASV 9
G+A SASV
Sbjct: 2326 GIAQSASV 2333
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 GLASSASV 9
G+A SASV
Sbjct: 2326 GIAQSASV 2333
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 GLASSASV 9
G+A SASV
Sbjct: 2326 GIAQSASV 2333
6|SequenceR|35|26|RSAPAVGLAS
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 SAPAVGLAS 10
S P VGLAS
Sbjct: 754 SVPYVGLAS 762
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 1 RSAPAVGLAS 10
RS+PA GL++
Sbjct: 219 RSSPARGLSA 228
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 SAPAVGLAS 10
S P VG+AS
Sbjct: 754 SVPFVGIAS 762
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 2 SAPAVGLAS 10
S P VG+AS
Sbjct: 201 STPPVGVAS 209
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 SAPAVGLAS 10
S P VGLA+
Sbjct: 771 SVPYVGLAN 779
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 SAPAVGLAS 10
S P VGLA+
Sbjct: 771 SVPYVGLAN 779
7|SequenceR|40|31|LCTENRSAPA
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 LCTENRSA 8
LCTEN +A
Sbjct: 1380 LCTENNTA 1387
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LCTENRSAPA 10
LC++N AP
Sbjct: 237 LCSQNLGAPG 246
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LCTENRSAPA 10
LC++N AP
Sbjct: 237 LCSQNLGAPG 246
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 1 LCTENRSAPA 10
LC++N AP
Sbjct: 237 LCSQNLGAPG 246
>sp|LMP1_EBVB9|LATENT membrane protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LCTENRSAPA 10
LC++N AP
Sbjct: 237 LCSQNLGAPG 246
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 LCTENRSA 8
LCTEN +A
Sbjct: 1380 LCTENNTA 1387
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 3 TENRSAPA 10
+ENR PA
Sbjct: 495 SENRGGPA 502
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CTENRSAP 9
CT+ RS+P
Sbjct: 68 CTKLRSSP 75
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 CTENRSAP 9
CT+ RS+P
Sbjct: 68 CTKLRSSP 75
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CTENRSAP 9
CT+ RS+P
Sbjct: 68 CTKLRSSP 75
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CTENRSAP 9
CT+ RS+P
Sbjct: 68 CTKLRSSP 75
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 2 CTENRSAP 9
CT+ RS+P
Sbjct: 67 CTKLRSSP 74
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 LCTENRSA 8
LC+EN +A
Sbjct: 1380 LCSENNTA 1387
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 LCTENRSA 8
LC+EN +A
Sbjct: 1380 LCSENNTA 1387
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 LCTENRSA 8
LC+EN +A
Sbjct: 1380 LCSENNTA 1387
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 CTENRSAPA 10
CT +APA
Sbjct: 203 CTNAENAPA 211
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 4 ENRSAPA 10
+NRSAP
Sbjct: 568 DNRSAPG 574
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 4 ENRSAPA 10
+NRSAP
Sbjct: 568 DNRSAPG 574
>sp|UL09_HCMVM|MEMBRANE glycoprotein UL9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CTENRS 7
CT+NR+
Sbjct: 91 CTDNRT 96
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 LCTENRSA 8
+C++NR A
Sbjct: 59 ICSQNRRA 66
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 4 ENRSAPA 10
+NRSAP
Sbjct: 563 DNRSAPG 569
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 1 LCTENRS 7
LCT N+S
Sbjct: 91 LCTLNKS 97
8|SequenceR|45|36|ACSEGLCTEN
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 GLCTEN 10
GLCT+N
Sbjct: 197 GLCTKN 202
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 6 LCTEN 10
LCTEN
Sbjct: 1380 LCTEN 1384
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 6 LCTEN 10
LCTEN
Sbjct: 1380 LCTEN 1384
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 SEGLCTE 9
S+GLC E
Sbjct: 2044 SKGLCIE 2050
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 ACSEGLCT 8
CSE +C+
Sbjct: 1631 GCSEWICS 1638
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 ACSEGLCT 8
CSE +C+
Sbjct: 1632 GCSEWICS 1639
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 5 GLCTEN 10
G CTEN
Sbjct: 350 GPCTEN 355
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 EGLCTEN 10
EGLC ++
Sbjct: 198 EGLCAQD 204
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 EGLCTEN 10
EGLC ++
Sbjct: 198 EGLCAQD 204
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 EGLCTEN 10
EGLC ++
Sbjct: 198 EGLCAQD 204
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 EGLCTEN 10
EGLC ++
Sbjct: 198 EGLCAQD 204
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 ACSEGLCT 8
CSE +C+
Sbjct: 1631 GCSEWVCS 1638
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 ACSEGLCT 8
CSE +C+
Sbjct: 1631 GCSEWVCS 1638
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 ACSEGLCT 8
CSE +C+
Sbjct: 1631 GCSEWVCS 1638
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 ACSEGLCT 8
CSE +C+
Sbjct: 1631 GCSEWVCS 1638
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 ACSEGLCT 8
CSE +C+
Sbjct: 1631 GCSEWVCS 1638
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 ACSEGLCT 8
CSE +C+
Sbjct: 1631 GCSEWVCS 1638
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 ACSEGLCT 8
CSE +C+
Sbjct: 1631 GCSEWVCS 1638
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 ACSEGLCT 8
CSE +C+
Sbjct: 1632 GCSEWVCS 1639
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 ACSEGLCT 8
CSE +C+
Sbjct: 1631 GCSEWVCS 1638
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 1 ACSEGLCTEN 10
A S+G+ EN
Sbjct: 71 AASDGIVNEN 80
>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus
Query: 1 ACSEGLCTEN 10
A S+G+ EN
Sbjct: 67 AASDGIVNEN 76
>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate
Query: 1 ACSEGLCTEN 10
A S+G+ EN
Sbjct: 67 AASDGIVNEN 76
>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 ACSEGLCTEN 10
A S+G+ EN
Sbjct: 67 AASDGIVNEN 76
>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ACSEGLCTEN 10
A S+G+ EN
Sbjct: 67 AASDGIVNEN 76
>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ACSEGLCTEN 10
A S+G+ EN
Sbjct: 67 AASDGIVNEN 76
>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)
Query: 1 ACSEGLCTEN 10
A S+G+ EN
Sbjct: 67 AASDGIVNEN 76
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 EGLCTEN 10
EG+C E+
Sbjct: 82 EGICPED 88
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 GLCTEN 10
G CT+N
Sbjct: 191 GTCTQN 196
9|SequenceR|50|41|QIVTPACSEG
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 QIVTPACSE 9
I TPAC E
Sbjct: 210 HICTPACGE 218
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 QIVTPAC 7
QIV+P C
Sbjct: 127 QIVSPRC 133
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 QIVTPAC 7
QIV+P C
Sbjct: 127 QIVSPRC 133
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 QIVTPAC 7
QIV+P C
Sbjct: 127 QIVSPRC 133
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 1 QIVTPACS 8
+I+TP CS
Sbjct: 166 RIMTPDCS 173
>sp|UL20_HHV11|PROTEIN UL20|Human herpesvirus 1 (strain 17)
Query: 1 QIVTPAC 7
++V PAC
Sbjct: 91 RVVAPAC 97
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 3 VTPACSEG 10
VTP+ +EG
Sbjct: 239 VTPSVAEG 246
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 QIVTPAC 7
QIV P C
Sbjct: 127 QIVRPRC 133
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 1 QIVTPA 6
Q+VTPA
Sbjct: 190 QLVTPA 195
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 QIVTPACSEG 10
++++P+ S+G
Sbjct: 205 ELISPSTSQG 214
>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 1 QIVTPACS 8
+++TP CS
Sbjct: 166 RLMTPDCS 173
>sp|VE7_HPV17|PROTEIN E7|Human papillomavirus 17
Query: 1 QIVTPACSE 9
Q+V P C E
Sbjct: 82 QLVCPNCRE 90
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 IVTPACSE 9
++T ACS+
Sbjct: 200 VITQACSK 207
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 4 TPACSE 9
TPAC E
Sbjct: 202 TPACDE 207
>sp|VE7_HPV54|PROTEIN E7|Human papillomavirus type 54
Query: 1 QIVTPACS 8
QIV P C+
Sbjct: 85 QIVCPTCA 92
>sp|UL106_HCMVA|UNCHARACTERIZED protein UL106|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PACSEG 10
PAC +G
Sbjct: 41 PACDDG 46
10|SequenceR|55|46|DRGRRQIVTP
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DRGRRQIVT 9
D+GR+++VT
Sbjct: 1044 DKGRQKVVT 1052
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DRGRRQIVT 9
+RGR+++VT
Sbjct: 1059 NRGRQKVVT 1067
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DRGRRQIVT 9
+RGR+++VT
Sbjct: 1047 NRGRQKVVT 1055
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DRGRRQIVT 9
+RGR+++VT
Sbjct: 1059 NRGRQKVVT 1067
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DRGRRQIVT 9
D+GR++++T
Sbjct: 1044 DKGRQKVIT 1052
>sp|UXP_ADE02|U exon protein|Human adenovirus C serotype 2
Query: 2 RGRRQIVT 9
RGRR++VT
Sbjct: 137 RGRRRLVT 144
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 GRRQIVTP 10
G+R I TP
Sbjct: 2271 GKRDITTP 2278
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 1 DRGRRQ 6
+RGRRQ
Sbjct: 45 NRGRRQ 50
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DRGRRQIVT 9
D+G+++I+T
Sbjct: 1047 DKGKQKIIT 1055
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DRGRRQIVT 9
D+G+++I+T
Sbjct: 1045 DKGKQKIIT 1053
11|SequenceR|60|51|GPGWADRGRR
>sp|GG_HHV11|ENVELOPE glycoprotein G|Human herpesvirus 1 (strain 17)
Query: 3 GWADRGRR 10
GW+ RGRR
Sbjct: 216 GWSRRGRR 223
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 PGWAD 6
PGW+D
Sbjct: 661 PGWSD 665
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 PGWAD 6
PGW D
Sbjct: 660 PGWTD 664
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 4 WADRGRR 10
W +RG R
Sbjct: 394 WGERGNR 400
>sp|YVAP_VACCC|UNCHARACTERIZED 9.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GP---GWADRG 8
GP GW D+G
Sbjct: 24 GPSKIGWLDKG 34
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 1 GPGWADR 7
GP W DR
Sbjct: 123 GPVWCDR 129
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 1 GPGWADR 7
GP W DR
Sbjct: 123 GPVWCDR 129
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 GPGWADR 7
G GW+DR
Sbjct: 89 GMGWSDR 95
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 1 GPGWADR 7
G GW+ R
Sbjct: 99 GQGWSSR 105
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GPGWAD 6
G GW D
Sbjct: 1558 GEGWED 1563
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GPGWAD 6
G GW D
Sbjct: 1558 GEGWED 1563
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GPGWAD 6
G GW D
Sbjct: 1558 GEGWED 1563
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GPGWAD 6
G GW D
Sbjct: 1558 GEGWED 1563
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GPGWAD 6
G GW D
Sbjct: 1558 GEGWED 1563
12|SequenceR|65|56|DRASNGPGWA
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 DRASNGPGWA 10
D A +GP WA
Sbjct: 1555 DEAISGPYWA 1564
>sp|NP1_HBOC4|NON-STRUCTURAL protein NP-1|Human bocavirus 4 (HBoV4) (Human
Query: 4 SNGPGW 9
SN PGW
Sbjct: 98 SNAPGW 103
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 DRASNGPGWA 10
D A GP WA
Sbjct: 1553 DNAVAGPYWA 1562
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 3 ASNGPGW 9
+SN P W
Sbjct: 57 SSNNPKW 63
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 ASNGPGWA 10
A++GP WA
Sbjct: 1555 ATSGPYWA 1562
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 3 ASNGP 7
ASNGP
Sbjct: 681 ASNGP 685
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 3 ASNGP 7
ASNGP
Sbjct: 681 ASNGP 685
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 3 ASNGP 7
ASNGP
Sbjct: 681 ASNGP 685
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 4 SNGPGW 9
SNG GW
Sbjct: 130 SNGVGW 135
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 4 SNGPGW 9
SNG GW
Sbjct: 130 SNGVGW 135
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 RASNGPG 8
R +NGPG
Sbjct: 104 RGNNGPG 110
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 DRASNGPGWA 10
D A GP WA
Sbjct: 1553 DDAVAGPYWA 1562
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 DRASNGPGWA 10
D A GP WA
Sbjct: 1553 DDAVAGPYWA 1562
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 DRASNGPGWA 10
D A GP WA
Sbjct: 1553 DDAVAGPYWA 1562
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 DRASNGPGWA 10
D A GP WA
Sbjct: 1553 DDAVAGPYWA 1562
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 DRASNGPGWA 10
D A GP WA
Sbjct: 1553 DDALAGPYWA 1562
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 DRASNGPGWA 10
+ A +GP WA
Sbjct: 1555 EEAISGPYWA 1564
13|SequenceR|70|61|RARLVDRASN
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 1 RARLVDRASN 10
RA+ +D+A N
Sbjct: 63 RAKTIDKALN 72
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 1 RARLVDRAS 9
RAR V RAS
Sbjct: 3 RARRVKRAS 11
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 4 LVDRASN 10
+VDRA+N
Sbjct: 100 VVDRAAN 106
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 4 LVDRAS 9
LVDRAS
Sbjct: 48 LVDRAS 53
14|SequenceR|75|66|EERPARARLV
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 1 EERPARARLV 10
+E P+RA++V
Sbjct: 257 KEHPSRAKVV 266
>sp|E434_ADE02|EARLY 4 ORF6 protein|Human adenovirus C serotype 2
Query: 3 RPARARL 9
RP R+RL
Sbjct: 13 RPTRSRL 19
15|SequenceR|80|71|FAAGQEERPA
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 QEERPA 10
QEERPA
Sbjct: 1681 QEERPA 1686
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 2 AAGQEERP 9
+G+EERP
Sbjct: 107 GSGEEERP 114
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 3 AGQEERP 9
AGQ RP
Sbjct: 650 AGQNHRP 656
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 AGQEERP 9
GQ++RP
Sbjct: 478 GGQDQRP 484
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 1 FAAGQEERP 9
+A GQ E+P
Sbjct: 545 YAVGQFEKP 553
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 1 FAAGQEERP 9
+A GQ E+P
Sbjct: 375 YAVGQFEQP 383
16|SequenceR|85|76|SPGALFAAGQ
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 PGALFAAG 9
PGA FAA
Sbjct: 967 PGAYFAAA 974
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 GALFAAGQ 10
G+LF AGQ
Sbjct: 282 GSLFLAGQ 289
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 GALFAAGQ 10
G+LF AGQ
Sbjct: 282 GSLFLAGQ 289
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 PGALFA 7
PG+LFA
Sbjct: 1957 PGSLFA 1962
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 GALFAAGQ 10
GA+F AGQ
Sbjct: 282 GAVFLAGQ 289
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 PGALFA 7
PG+LFA
Sbjct: 1957 PGSLFA 1962
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 GALFAAGQ 10
GALF GQ
Sbjct: 282 GALFLVGQ 289
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 PGALFA 7
PG+LFA
Sbjct: 1957 PGSLFA 1962
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 PGALFA 7
PG+LFA
Sbjct: 1957 PGSLFA 1962
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 PGALFA 7
PG+LFA
Sbjct: 1957 PGSLFA 1962
17|SequenceR|90|81|APLDWSPGAL
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 APLDWSPG 8
AP++W PG
Sbjct: 46 APVNWGPG 53
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 APLDWSPG 8
AP++W PG
Sbjct: 46 APVNWGPG 53
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 APLDWSPGAL 10
AP+DW G L
Sbjct: 46 APVDWGHGEL 55
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 APLDWSPGAL 10
AP+DW G L
Sbjct: 46 APVDWGHGEL 55
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 APLDWSPGAL 10
AP+DW G L
Sbjct: 46 APVDWGHGEL 55
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 217 PLPWLPGA 224
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 266 PLPWLPGA 273
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 217 PLPWLPGA 224
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 397 PLPWLPGA 404
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 497 PLPWLPGA 504
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 217 PLPWLPGA 224
Query: 3 LDWSPG 8
LD+SPG
Sbjct: 1193 LDFSPG 1198
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 497 PLPWLPGA 504
Query: 3 LDWSPG 8
LD+SPG
Sbjct: 1603 LDFSPG 1608
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 497 PLPWLPGA 504
Query: 3 LDWSPG 8
LD+SPG
Sbjct: 1603 LDFSPG 1608
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 497 PLPWLPGA 504
Query: 3 LDWSPG 8
LD+SPG
Sbjct: 1603 LDFSPG 1608
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 497 PLPWLPGA 504
Query: 3 LDWSPG 8
LD+SPG
Sbjct: 1603 LDFSPG 1608
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 497 PLPWLPGA 504
Query: 3 LDWSPG 8
LD+SPG
Sbjct: 1603 LDFSPG 1608
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 497 PLPWLPGA 504
Query: 3 LDWSPG 8
LD+SPG
Sbjct: 1603 LDFSPG 1608
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PLDWSPGA 9
PL W PGA
Sbjct: 497 PLPWLPGA 504
Query: 3 LDWSPG 8
LD+SPG
Sbjct: 1603 LDFSPG 1608
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 PLDWSP 7
P+DW+P
Sbjct: 1074 PIDWTP 1079
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 PLDWSPGA 9
PLD+ PG+
Sbjct: 299 PLDYCPGS 306
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 APLDWSPG 8
A DW PG
Sbjct: 6776 ASADWKPG 6783
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 PLDWSP 7
P+DW+P
Sbjct: 1073 PIDWTP 1078
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 PLDWSPGA 9
PLD+ PG+
Sbjct: 299 PLDYCPGS 306
>sp|X_HBVH1|PROTEIN X|Hepatitis B virus genotype H
Query: 2 PLDWSPGAL 10
PL WS GAL
Sbjct: 29 PLSWSLGAL 37
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 APLDWSPGAL 10
AP++W G L
Sbjct: 46 APVNWGHGEL 55
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 APLDWSPGAL 10
AP++W G L
Sbjct: 45 APVNWGHGEL 54
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 APLDWSPG 8
A DW PG
Sbjct: 6797 AASDWKPG 6804
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 APLDWSPG 8
A DW PG
Sbjct: 6854 ATSDWKPG 6861
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 PLDWSPGA 9
PLD+S GA
Sbjct: 297 PLDFSAGA 304
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 DWSPG 8
DW PG
Sbjct: 6837 DWKPG 6841
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 DWSPG 8
DW PG
Sbjct: 6887 DWKPG 6891
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 APLDWSPG 8
AP+ WS G
Sbjct: 46 APVTWSHG 53
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 2 PLDWSPGAL 10
P W+PGAL
Sbjct: 297 PPHWAPGAL 305
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 2 PLDWSPGAL 10
P W+PGAL
Sbjct: 296 PPHWAPGAL 304
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 APLDWSPG 8
AP++W+ G
Sbjct: 208 APINWAQG 215
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3276 PIDWVP 3281
Query: 3 LDWSPGA 9
LD+ PGA
Sbjct: 1664 LDYHPGA 1670
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 1 APLDWSPG 8
AP++W+ G
Sbjct: 208 APINWAQG 215
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 APLDWSPG 8
AP++W+ G
Sbjct: 208 APINWAQG 215
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3309 PIDWVP 3314
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3298 PIDWVP 3303
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 PLDWSPGA 9
P+DW P
Sbjct: 3294 PVDWVPAG 3301
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3293 PVDWVP 3298
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3298 PIDWVP 3303
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3275 PVDWVP 3280
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 APLDWSPGAL 10
AP++W G +
Sbjct: 46 APVNWGHGEI 55
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 APLDWSPGAL 10
AP++W G +
Sbjct: 46 APVNWGHGEI 55
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 APLDWSPGAL 10
AP++W G +
Sbjct: 46 APVNWGHGEI 55
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 APLDWSPGAL 10
AP++W G +
Sbjct: 46 APVNWGHGEI 55
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 APLDWSPGAL 10
AP++W G +
Sbjct: 46 APVNWGHGEI 55
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 APLDWSPGAL 10
AP++W G +
Sbjct: 46 APVNWGHGEI 55
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 APLDWSPGAL 10
AP++W G +
Sbjct: 46 APVNWGHGEI 55
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 APLDWSPGAL 10
AP++W G +
Sbjct: 46 APVNWGHGEI 55
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3276 PVDWVP 3281
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 APLDWSPG 8
APLD PG
Sbjct: 251 APLDVCPG 258
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3276 PVDWVP 3281
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3287 PVDWVP 3292
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3306 PVDWVP 3311
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3318 PVDWVP 3323
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3316 PVDWVP 3321
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3316 PVDWVP 3321
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3316 PVDWVP 3321
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 WSPG 8
WSPG
Sbjct: 976 WSPG 979
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 5 WSPG 8
WSPG
Sbjct: 977 WSPG 980
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 5 WSPG 8
WSPG
Sbjct: 976 WSPG 979
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 WSPG 8
WSPG
Sbjct: 976 WSPG 979
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 5 WSPG 8
WSPG
Sbjct: 976 WSPG 979
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 5 WSPG 8
WSPG
Sbjct: 976 WSPG 979
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 5 WSPG 8
WSPG
Sbjct: 976 WSPG 979
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 5 WSPG 8
WSPG
Sbjct: 977 WSPG 980
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 5 WSPG 8
WSPG
Sbjct: 977 WSPG 980
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 1 APLDWS 6
APLDW+
Sbjct: 105 APLDWT 110
Query: 1 APLDWS 6
+P+DWS
Sbjct: 328 SPIDWS 333
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3306 PVDWVP 3311
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3302 PVDWVP 3307
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3296 PVDWVP 3301
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3296 PVDWVP 3301
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3296 PVDWVP 3301
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3296 PVDWVP 3301
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3316 PVDWVP 3321
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PLDWSPG 8
P +W PG
Sbjct: 338 PQEWKPG 344
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PLDWSPG 8
P +W PG
Sbjct: 338 PQEWKPG 344
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 APLDWSPGAL 10
AP++W G +
Sbjct: 46 APVNWRHGEI 55
>sp|EBNA2_EBVG|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 APLDWSP 7
+PLDW P
Sbjct: 77 SPLDWDP 83
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 PLDWSP 7
P+DW P
Sbjct: 3307 PVDWVP 3312
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 APLDWSPG 8
AP++W G
Sbjct: 46 APVNWGHG 53
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 WSPGAL 10
WSPG +
Sbjct: 343 WSPGII 348
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 APLDWSPG 8
AP+ W G
Sbjct: 46 APVSWGSG 53
>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12
Query: 1 APLDWSPGA 9
A L W P A
Sbjct: 340 ADLRWQPSA 348
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 LDWSPGA 9
LD+ PGA
Sbjct: 1680 LDYHPGA 1686
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 PLDWSP 7
P DW P
Sbjct: 3296 PADWVP 3301
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 LDWSPG 8
L+W PG
Sbjct: 470 LEWMPG 475
18|SequenceR|95|86|DRGPAAPLDW
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 GPAAPLD 9
GPAAP+D
Sbjct: 1000 GPAAPVD 1006
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 PAAPLDW 10
PA P+DW
Sbjct: 3293 PAVPVDW 3299
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 RGPAAPLDW 10
R PAA L W
Sbjct: 296 RTPAAALYW 304
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3274 AVPIDW 3279
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 5 AAPLDW 10
+APLDW
Sbjct: 104 SAPLDW 109
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 DRGPAA 6
DRGP+A
Sbjct: 1081 DRGPSA 1086
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DRGPAAP 7
DRG AAP
Sbjct: 506 DRGLAAP 512
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DRGPAAP 7
DRG AAP
Sbjct: 508 DRGLAAP 514
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DRGPAAP 7
DRG AAP
Sbjct: 505 DRGLAAP 511
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DRGPAAP 7
DRG AAP
Sbjct: 507 DRGLAAP 513
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DRGPAAP 7
DRG AAP
Sbjct: 507 DRGLAAP 513
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3307 AVPIDW 3312
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3274 AVPVDW 3279
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DRGPAAPLD 9
RGP +PL
Sbjct: 108 SRGPVSPLQ 116
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DRGPAAPLD 9
RGP +PL
Sbjct: 108 SRGPVSPLQ 116
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3274 AVPVDW 3279
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3273 AVPVDW 3278
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3291 AVPVDW 3296
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DRGPAAP 7
DRG AAP
Sbjct: 507 DRGFAAP 513
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 PAAPLDW 10
PAA L+W
Sbjct: 188 PAASLEW 194
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DRGPAAP 7
DRG AAP
Sbjct: 505 DRGFAAP 511
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 PAAPLDW 10
PAA L+W
Sbjct: 188 PAASLEW 194
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 RGPAAPLDW 10
RGP PL +
Sbjct: 45 RGPQTPLCF 53
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DRGPAAP 7
DRG AAP
Sbjct: 507 DRGFAAP 513
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 2 RGPAAPLDW 10
R P A L W
Sbjct: 310 RSPVAALYW 318
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 DRGPAAP 7
+ GPAAP
Sbjct: 504 ETGPAAP 510
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3314 AVPVDW 3319
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3314 AVPVDW 3319
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3300 AVPVDW 3305
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3314 AVPVDW 3319
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 DRGPAAPLDW 10
++GP PL W
Sbjct: 371 EQGPRPPLFW 380
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DRGPAAP 7
DRG AAP
Sbjct: 507 DRGFAAP 513
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3305 AVPVDW 3310
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 DRGPAAPLDW 10
++GP PL W
Sbjct: 371 EQGPRPPLFW 380
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 DRGPAAPLDW 10
++GP PL W
Sbjct: 371 EQGPRPPLFW 380
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3292 AVPVDW 3297
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 2 RGPAAPLDW 10
R P A L W
Sbjct: 315 RSPVAALYW 323
>sp|YVBI_VACCC|UNCHARACTERIZED 7.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DRGPAAPLDW 10
DRG L W
Sbjct: 42 DRGRVLTLSW 51
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 2 RGPAAPL 8
+GP AP+
Sbjct: 15 KGPIAPI 21
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 DRGPAAPLDW 10
D G AA L W
Sbjct: 523 DEGAAAGLAW 532
>sp|NCAP_TOSV|NUCLEOPROTEIN virus (Tos)
Query: 1 DRGPAAPLDW 10
+RG A DW
Sbjct: 46 ERGTAKGRDW 55
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 5 AAPLDW 10
A P+DW
Sbjct: 3296 AVPIDW 3301
19|SequenceR|100|91|RGAAPDRGPA
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 RGAAPDRGPA 10
RG+ P RGP+
Sbjct: 101 RGSRPSRGPS 110
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 GAAPDRG 8
GAA DRG
Sbjct: 1536 GAAGDRG 1542
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 GAAPDRG 8
GAA DRG
Sbjct: 1536 GAAGDRG 1542
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 RGAAPDRGPA 10
RGAA RG A
Sbjct: 2558 RGAAVSRGSA 2567
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 AAPDRGPA 10
+AP RGPA
Sbjct: 120 SAPTRGPA 127
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 AAPDRGPA 10
+AP RGPA
Sbjct: 120 SAPTRGPA 127
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 1 RGAAPDRGP 9
R PD GP
Sbjct: 235 RQCDPDEGP 243
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 5 PDRGP 9
P+RGP
Sbjct: 476 PERGP 480
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 5 PDRGP 9
P+RGP
Sbjct: 476 PERGP 480
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 5 PDRGP 9
P+RGP
Sbjct: 476 PERGP 480
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PDRGP 9
P+RGP
Sbjct: 476 PERGP 480
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 5 PDRGP 9
P+RGP
Sbjct: 468 PERGP 472
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 5 PDRGP 9
P+RGP
Sbjct: 476 PERGP 480
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 5 PDRGP 9
P+RGP
Sbjct: 476 PERGP 480
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 5 PDRGP 9
P+RGP
Sbjct: 476 PERGP 480
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 5 PDRGP 9
P+RGP
Sbjct: 476 PERGP 480
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 4 APDRGP 9
APDR P
Sbjct: 315 APDRSP 320
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 AAPDRGPA 10
AP RGPA
Sbjct: 120 TAPTRGPA 127
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 AAPDRGPA 10
AP RGPA
Sbjct: 120 TAPTRGPA 127
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 AAPDRGPA 10
AP RGPA
Sbjct: 120 TAPTRGPA 127
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 AAPDRGPA 10
AP RGPA
Sbjct: 120 TAPTRGPA 127
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 2 GAAPDRGPA 10
G PD GPA
Sbjct: 451 GFVPDTGPA 459
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 AAPDRGPA 10
AP RGPA
Sbjct: 120 TAPTRGPA 127
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 GAAPDRGPA 10
G PD GPA
Sbjct: 451 GFVPDTGPA 459
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 AAPDRGPA 10
AP RGPA
Sbjct: 120 TAPTRGPA 127
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 AAPDRGPA 10
AP RGPA
Sbjct: 120 TAPTRGPA 127
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 GAAPDRGPA 10
G PD GPA
Sbjct: 451 GFVPDTGPA 459
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 GAAPDRGPA 10
G PD GPA
Sbjct: 451 GFVPDTGPA 459
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 GAAPDRGPA 10
G PD GPA
Sbjct: 451 GFVPDTGPA 459
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 2 GAAPDRGPA 10
G PD GPA
Sbjct: 451 GFVPDTGPA 459
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PDRGPA 10
PD GP+
Sbjct: 14 PDEGPS 19
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PDRGPA 10
PD GP+
Sbjct: 14 PDEGPS 19
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 PDRGPA 10
PD GP+
Sbjct: 14 PDEGPS 19
>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PDRGPA 10
P+RGP
Sbjct: 104 PERGPG 109
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RGAAPDRGPA 10
RG+ P+ GP
Sbjct: 101 RGSRPNWGPT 110
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 RGAAPDRGP 9
RG+ P+ GP
Sbjct: 101 RGSRPNWGP 109
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 RGAAPDRGP 9
RG+ P+ GP
Sbjct: 101 RGSRPNWGP 109
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 RGAAPDRGP 9
RG+ P+ GP
Sbjct: 101 RGSRPNWGP 109
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GAAPDRGP 9
G PD GP
Sbjct: 246 GGGPDNGP 253
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 RGAAPDRGPA 10
RG+ P GP+
Sbjct: 101 RGSRPSWGPS 110
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 2 GAAPDRGP 9
G PD GP
Sbjct: 246 GGGPDNGP 253
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 RGAAPDRGPA 10
RG+ P GP+
Sbjct: 101 RGSRPSWGPS 110
20|SequenceR|105|96|SAEAGRGAAP
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 AGRGAAP 10
AGR AAP
Sbjct: 836 AGRSAAP 842
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 EAGRGA 8
EAGRG+
Sbjct: 114 EAGRGS 119
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 EAGRGA 8
EAGRG+
Sbjct: 114 EAGRGS 119
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 AEAGRG 7
AEAG+G
Sbjct: 2066 AEAGKG 2071
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 AEAGRG 7
AEAG+G
Sbjct: 2077 AEAGKG 2082
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 AEAGRG 7
AEAG+G
Sbjct: 2076 AEAGKG 2081
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 AEAGRG 7
AEAG+G
Sbjct: 2067 AEAGKG 2072
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 5 GRGAAP 10
GRGA P
Sbjct: 413 GRGATP 418
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 4 AGRGAAP 10
+G GAAP
Sbjct: 18 SGAGAAP 24
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 4 AGRGAAP 10
+G GAAP
Sbjct: 18 SGAGAAP 24
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 AEAGRG 7
AEAG+G
Sbjct: 2068 AEAGKG 2073
21|SequenceR|110|101|PPGAASAEAG
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 PPGAASA 7
PPG ASA
Sbjct: 15 PPGGASA 21
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PPGAASA 7
PPGAASA
Sbjct: 1822 PPGAASA 1828
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 1 PPGAASAEAG 10
PP S EAG
Sbjct: 93 PPKVVSYEAG 102
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PPGAASAEAG 10
PP S EAG
Sbjct: 93 PPKVVSYEAG 102
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PPGAASAEAG 10
PP S EAG
Sbjct: 93 PPQVVSYEAG 102
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 PPGAASAEAG 10
PP S EAG
Sbjct: 93 PPQVVSYEAG 102
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 PPGAASAEAG 10
PP S EAG
Sbjct: 94 PPKVVSYEAG 103
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 PPGAASAEAG 10
PP S EAG
Sbjct: 94 PPKVVSYEAG 103
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 PPGAASAEAG 10
PP S EAG
Sbjct: 94 PPKVVSYEAG 103
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 1 PPGAASAEAG 10
PP S EAG
Sbjct: 94 PPKVVSYEAG 103
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 1 PPGAASAEAG 10
PP S EAG
Sbjct: 94 PPKVVSYEAG 103
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPGAASAEAG 10
PP +S E G
Sbjct: 168 PPALSSPETG 177
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 PPGAASAEAG 10
PP S EAG
Sbjct: 93 PPQVVSYEAG 102
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PPGAASAEAG 10
PP S EAG
Sbjct: 93 PPQVVSYEAG 102
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 2 PGAASAEAG 10
PG ASA AG
Sbjct: 363 PGVASAAAG 371
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PPGAASAEAG 10
PP S EAG
Sbjct: 93 PPKVVSYEAG 102
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 2 PGAASAEAG 10
PGAA EAG
Sbjct: 1114 PGAAGPEAG 1122
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)
Query: 2 PGAASAEAG 10
PGAA EAG
Sbjct: 1114 PGAAGPEAG 1122
22|SequenceR|115|106|RTPPGPPGAA
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 RTPPGPP 7
RTP GPP
Sbjct: 269 RTPGGPP 275
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 2 TPPGPPGA 9
TPPG PG
Sbjct: 202 TPPGSPGG 209
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 RTPPGPPG 8
+ PP PPG
Sbjct: 2862 KAPPPPPG 2869
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 2 TPPGPPGA 9
TPPG PG
Sbjct: 201 TPPGSPGG 208
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 RTPPGPPGA 9
R PGPP +
Sbjct: 823 RKGPGPPSS 831
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RTPPGPPGA 9
R PGPP +
Sbjct: 823 RKGPGPPSS 831
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RTPPGPPGA 9
R PGPP +
Sbjct: 822 RKGPGPPSS 830
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPEGPP 275
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 RTPPGPPGA 9
RTPP PP A
Sbjct: 22 RTPPTPPAA 30
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 265 RLPDGPP 271
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 246 RLPDGPP 252
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 262 RLPDGPP 268
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 262 RLPDGPP 268
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TPPGPP 7
TP GPP
Sbjct: 725 TPRGPP 730
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 2 TPPGPPG 8
TPPG PG
Sbjct: 202 TPPGSPG 208
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 TPPGPPGA 9
+P GPPG+
Sbjct: 331 SPTGPPGS 338
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 TPPGPPGA 9
+P GPPG+
Sbjct: 331 SPTGPPGS 338
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPNGPP 275
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPNGPP 275
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPNGPP 275
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPNGPP 275
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPNGPP 275
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPNGPP 275
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 TPPGPPGA 9
+P GPPG+
Sbjct: 331 SPTGPPGS 338
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPGGPP 275
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPDGPP 275
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 RTPPGPPGA 9
R PP PPGA
Sbjct: 488 RRPPEPPGA 496
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 PPGPPGAA 10
PP PP A
Sbjct: 183 PPTPPATA 190
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPCGPP 275
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPCGPP 275
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 269 RLPCGPP 275
>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b
Query: 2 TPPGPPG 8
TPPG PG
Sbjct: 202 TPPGSPG 208
>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5
Query: 2 TPPGPPG 8
TPPG PG
Sbjct: 202 TPPGSPG 208
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 TPPGPPGAA 10
TPP PG++
Sbjct: 670 TPPNSPGSS 678
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PPGPP 7
PP PP
Sbjct: 1952 PPNPP 1956
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PPGPP 7
PP PP
Sbjct: 1952 PPNPP 1956
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PPGPP 7
PP PP
Sbjct: 1952 PPNPP 1956
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PPGPP 7
PP PP
Sbjct: 1952 PPNPP 1956
>sp|VE8E2_HPV47|PROTEIN E8^E2C|Human papillomavirus 47
Query: 2 TPPGPPGA 9
TPPG PG
Sbjct: 11 TPPGSPGG 18
>sp|VPX_HV2EH|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 RTPPGPPG 8
R PPG G
Sbjct: 6 RVPPGNSG 13
>sp|VE8E2_HPV05|PROTEIN E8^E2C|Human papillomavirus 5
Query: 2 TPPGPPG 8
TPPG PG
Sbjct: 11 TPPGSPG 17
>sp|VPX_HV2D1|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 RTPPGPPG 8
R PPG G
Sbjct: 7 RVPPGNSG 14
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PPGPP 7
PP PP
Sbjct: 1952 PPNPP 1956
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TPPGPPG 8
TPP PG
Sbjct: 1212 TPPDCPG 1218
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 3 PPGPPG 8
PPGPPG
Sbjct: 12 PPGPPG 17
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 4 PGPPGA 9
P PPGA
Sbjct: 247 PRPPGA 252
>sp|VPX_HV2BE|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 RTPPGPPG 8
R PPG G
Sbjct: 7 RVPPGNSG 14
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 RTPPGPPGA 9
+TPP PP A
Sbjct: 18 QTPPAPPAA 26
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 TPPGPPGAA 10
T GPPG+
Sbjct: 5250 TIQGPPGSG 5258
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 TPPGPPGAA 10
T GPPG+
Sbjct: 5275 TIQGPPGSG 5283
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 PGPP 7
PGPP
Sbjct: 1953 PGPP 1956
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 5 GPPGAA 10
GPPGA
Sbjct: 1211 GPPGAG 1216
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 TPPGPPGAA 10
T PG PG A
Sbjct: 33 TSPGTPGVA 41
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 TPPGPPG 8
TP G PG
Sbjct: 634 TPQGSPG 640
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 PGPP 7
PGPP
Sbjct: 1953 PGPP 1956
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 RTPPGPP 7
+ P GPP
Sbjct: 269 KLPDGPP 275
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 2 TPPGPPGA 9
TPP PG
Sbjct: 202 TPPESPGG 209
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 5 GPPGAA 10
GPPG+
Sbjct: 166 GPPGSG 171
>sp|VPX_HV2G1|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 RTPPGPPG 8
R PPG G
Sbjct: 7 RVPPGNSG 14
>sp|VPR_HV2NZ|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 RTPPGPPGAA 10
RTPP PG A
Sbjct: 13 RTPPREPGDA 22
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 TPPGPPGAA 10
T GPPG
Sbjct: 5589 TVQGPPGTG 5597
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 TPPGPPGAA 10
T GPPG
Sbjct: 5575 TVQGPPGTG 5583
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 TPPGPPGAA 10
T GPPG
Sbjct: 5613 TVQGPPGTG 5621
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 TPPGPPGAA 10
T GPPG
Sbjct: 5633 TVQGPPGTG 5641
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 TPPGPPGAA 10
T GPPG
Sbjct: 5663 TVQGPPGTG 5671
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 2 TPPGPPGAA 10
TPP PG +
Sbjct: 202 TPPDSPGGS 210
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 6 RAPSGPP 12
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 RTPPGPPG 8
+ PGPP
Sbjct: 176 QVAPGPPA 183
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 RTPPGPPG 8
+ PGPP
Sbjct: 176 QVAPGPPA 183
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 RTPPGPPG 8
+ PGPP
Sbjct: 176 QVAPGPPA 183
>sp|PHOSP_RABVH|PHOSPHOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 4 PGPPG 8
P PPG
Sbjct: 134 PNPPG 138
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RTPPGPP 7
R P GPP
Sbjct: 6 RAPSGPP 12
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 2 TPPGPPGA 9
TPP PG
Sbjct: 202 TPPDSPGG 209
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 TPPGPPGAA 10
T GPPG
Sbjct: 5603 TLQGPPGTG 5611
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 TPPGPPGAA 10
T GPPG
Sbjct: 5580 TLQGPPGTG 5588
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 2 TPPGPPGA 9
TPP PG
Sbjct: 202 TPPDSPGG 209
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 RTPPGPPGAA 10
+TP P G A
Sbjct: 1164 KTPKNPRGRA 1173
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 2 TPPG-PPGAA 10
TPPG PPG A
Sbjct: 202 TPPGSPPGQA 211
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 3 PPGPPG 8
PP PPG
Sbjct: 146 PPVPPG 151
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RTPPGPPGA 9
R PP PP A
Sbjct: 320 RHPPSPPCA 328
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 5 GPPGAA 10
GPPG A
Sbjct: 569 GPPGEA 574
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 3 PPGPPGAA 10
PPG PG A
Sbjct: 385 PPGDPGYA 392
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 3 PPGPPGA 9
PP PP A
Sbjct: 14 PPTPPVA 20
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 2 TPPGPPGA 9
TPP PG
Sbjct: 202 TPPDSPGG 209
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PPGPPGAA 10
PPG P ++
Sbjct: 531 PPGTPNSS 538
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 4 PGPP 7
PGPP
Sbjct: 15 PGPP 18
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 1 RTPPGPPGAA 10
R P PPG+A
Sbjct: 202 RAAPNPPGSA 211
>sp|PHOSP_RABVI|PHOSPHOPROTEIN virus (strain India) (RABV)
Query: 4 PGPPG 8
P PPG
Sbjct: 134 PNPPG 138
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 RTPPGP 6
RTPP P
Sbjct: 1835 RTPPVP 1840
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 3 PPGPPGA 9
PP PP A
Sbjct: 14 PPTPPVA 20
>sp|PHOSP_RABVS|PHOSPHOPROTEIN virus (strain SAD B19)
Query: 4 PGPPGAA 10
P PPG +
Sbjct: 134 PNPPGKS 140
>sp|VE8E2_HPV08|PROTEIN E8^E2C|Human papillomavirus type 8
Query: 2 TPPG-PPGAA 10
TPPG PPG A
Sbjct: 11 TPPGSPPGQA 20
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PPGP-PGAA 10
PPGP PG +
Sbjct: 296 PPGPDPGPS 304
>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RTPPGPPG 8
RTPPG G
Sbjct: 166 RTPPGKGG 173
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 3 PPGPPGA 9
PP PP A
Sbjct: 14 PPTPPVA 20
>sp|VPR_HV2ST|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 RTPPGPPG 8
RTPP PG
Sbjct: 13 RTPPREPG 20
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PPGP-PGAA 10
PPGP PG +
Sbjct: 296 PPGPDPGPS 304
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 RTPPGPPGAA 10
RT P P G A
Sbjct: 59 RTTPEPTGTA 68
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 3 PPGPPGA 9
PP PP A
Sbjct: 14 PPTPPVA 20
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 3 PPGPPGA 9
PP PP A
Sbjct: 14 PPTPPVA 20
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 TPPGPP 7
+P GPP
Sbjct: 268 SPKGPP 273
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 RTPPGPPGAA 10
R P GP AA
Sbjct: 418 RRPCGPQSAA 427
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 3 PPGPPGA 9
PP PP A
Sbjct: 14 PPTPPVA 20
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 RTPPGPPGAA 10
R P GP AA
Sbjct: 418 RRPCGPQSAA 427
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 RTPPGPPGAA 10
R P GP AA
Sbjct: 419 RRPCGPQSAA 428
23|SequenceR|120|111|WPGPPRTPPG
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PGPPRTPP 9
P PP+ PP
Sbjct: 234 PSPPKLPP 241
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PGPPRTPP 9
P PP+ PP
Sbjct: 234 PSPPKLPP 241
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 3 GPPRTPPG 10
GPP PPG
Sbjct: 65 GPPTAPPG 72
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 1 WPGPPRTP 8
+ GPPRTP
Sbjct: 360 YSGPPRTP 367
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 PPRTPP 9
PP+TPP
Sbjct: 529 PPQTPP 534
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 2 PGPPRTPP 9
P PP PP
Sbjct: 308 PSPPHYPP 315
>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WPGPPRTP 8
+P PPR+P
Sbjct: 61 YPSPPRSP 68
>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WPGPPRTP 8
+P PPR+P
Sbjct: 61 YPSPPRSP 68
>sp|NS1_I78A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPLTP 216
>sp|NS1_I78A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPLTP 216
>sp|NS1_I77A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Alaska/6/1977
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPLTP 216
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 PGPPRTPPG 10
P P RTP G
Sbjct: 265 PRPLRTPGG 273
>sp|NS1_I96A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPLTP 216
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 4 PPRTPP 9
PP TPP
Sbjct: 465 PPLTPP 470
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PPRTPP 9
PP TPP
Sbjct: 465 PPLTPP 470
>sp|NS1_I83A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPLTP 216
>sp|NS1_I73A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Port
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPLTP 216
>sp|NS1_I96A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPFTP 216
>sp|NS1_I89A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/352/1989
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPLTP 216
>sp|NS1_I80A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPLTP 216
>sp|NS1_I77A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPLTP 216
>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPFTP 216
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 5 PRTPP 9
P+TPP
Sbjct: 689 PKTPP 693
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 5 PRTPP 9
P+TPP
Sbjct: 685 PKTPP 689
>sp|NS1_I76A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPLTP 216
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PGPPRT 7
PGPP +
Sbjct: 826 PGPPSS 831
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PGPPRT 7
PGPP +
Sbjct: 826 PGPPSS 831
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PGPPRT 7
PGPP +
Sbjct: 825 PGPPSS 830
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GPPRTP 8
GP RTP
Sbjct: 655 GPRRTP 660
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PGPPRTP-PG 10
P P RTP PG
Sbjct: 352 PRPSRTPSPG 361
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PGPPRTP-PG 10
P P RTP PG
Sbjct: 352 PRPSRTPSPG 361
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PGPPRTP-PG 10
P P RTP PG
Sbjct: 352 PRPSRTPSPG 361
>sp|NS1_I75A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPLTP 216
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 4 PPRTPP 9
PP TPP
Sbjct: 535 PPSTPP 540
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GPPRTP 8
G PRTP
Sbjct: 248 GEPRTP 253
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GPPRTP 8
G PRTP
Sbjct: 248 GEPRTP 253
>sp|NS1_I40A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hickox/1940
Query: 3 GPPRTP 8
GPP TP
Sbjct: 211 GPPLTP 216
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PGPPRTPPG 10
P PP+ P G
Sbjct: 141 PSPPKQPTG 149
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 WPGPPR 6
+P PPR
Sbjct: 133 FPNPPR 138
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 PGPPRTPP 9
P PPR P
Sbjct: 821 PRPPRAVP 828
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 1 WPGPPRTPPG 10
W P TPPG
Sbjct: 386 WISQPSTPPG 395
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 2 PGPPRTPP 9
PG P PP
Sbjct: 19 PGTPSAPP 26
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 GPPRTPPG 10
G P TPP
Sbjct: 464 GKPCTPPA 471
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PGPPRTPPG 10
P PP+ P G
Sbjct: 141 PSPPKQPTG 149
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 WPGPPR 6
+P PPR
Sbjct: 133 FPNPPR 138
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 PGPPRTPP 9
P PPR P
Sbjct: 848 PRPPRAVP 855
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 WPGPPR 6
+P PPR
Sbjct: 133 FPNPPR 138
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 4 PPRTPPG 10
P RTPPG
Sbjct: 441 PARTPPG 447
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 PGPPRTPP 9
P PPR P
Sbjct: 848 PRPPRAVP 855
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 PGPPRTPP 9
P PPR P
Sbjct: 821 PRPPRAVP 828
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 PGPPRTPP 9
P PPR P
Sbjct: 853 PRPPRAVP 860
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 PGPPRTPP 9
P PPR P
Sbjct: 849 PRPPRAVP 856
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 PGPPRTPP 9
P PPR P
Sbjct: 849 PRPPRAVP 856
>sp|U24_HHV6U|U24 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GPPRTPP 9
PPRTPP
Sbjct: 2 DPPRTPP 8
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PGPPRTP 8
PGP R P
Sbjct: 575 PGPQRPP 581
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 4 PPRTPPG 10
PP T PG
Sbjct: 781 PPGTNPG 787
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 WPGPPRTPP 9
+P P +PP
Sbjct: 1965 YPAPVYSPP 1973
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 PGPPRTPP 9
PGP PP
Sbjct: 468 PGPSVDPP 475
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 WPGPPRT 7
W G PRT
Sbjct: 323 WHGDPRT 329
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 WPGPPRTPP 9
+P P +PP
Sbjct: 1965 YPAPVYSPP 1973
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 1 WPGPPRTPP 9
W G PRT P
Sbjct: 212 WTGNPRTAP 220
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PGPP 5
PGPP
Sbjct: 1953 PGPP 1956
>sp|NSS_RVFVZ|NON-STRUCTURAL protein S|Rift valley fever virus (strain
Query: 3 GPPRTP 8
GPPR P
Sbjct: 27 GPPRIP 32
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 GPPRTPPG 10
P R PPG
Sbjct: 3 APARDPPG 10
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 PGPPRTPP 9
P PPR P
Sbjct: 819 PRPPRLCP 826
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PGPP 5
PGPP
Sbjct: 1953 PGPP 1956
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 PGPPRTPP 9
P PPR P
Sbjct: 821 PRPPRLCP 828
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 WPGPPRTP 8
W GP R P
Sbjct: 892 WRGPQRLP 899
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 WPGPPRTP 8
W GP R P
Sbjct: 892 WRGPQRLP 899
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 WPGPPRTP 8
W GP R P
Sbjct: 888 WRGPQRLP 895
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 2 PGPPRTP 8
P PPRTP
Sbjct: 146 PSPPRTP 152
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 2 PGPPRTPP 9
PG P T P
Sbjct: 313 PGAPLTTP 320
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 2 PGPPRTPP 9
PG P T P
Sbjct: 313 PGAPLTTP 320
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 3 GPPRTPP 9
GP + PP
Sbjct: 234 GPAQAPP 240
24|SequenceR|125|116|AGKWRWPGPP
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 3 KWRWPGP 9
KWR P P
Sbjct: 175 KWRCPFP 181
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 3 KWRWPGP 9
KWR P P
Sbjct: 175 KWRCPFP 181
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 3 KWRWPGP 9
KWR P P
Sbjct: 175 KWRCPFP 181
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 3 KWRWPGP 9
KWR P P
Sbjct: 175 KWRCPFP 181
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 4 WRWPGP 9
W+W GP
Sbjct: 349 WKWLGP 354
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 1 AGKWRWPGP 9
+ W+W GP
Sbjct: 344 SSAWKWLGP 352
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 4 WRWPG 8
WRW G
Sbjct: 193 WRWKG 197
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 KWRWPGP 9
KW W GP
Sbjct: 2053 KWTWEGP 2059
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 4 WRWPGPP 10
W+W G P
Sbjct: 568 WKWGGNP 574
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 3 KWRWPGP 9
++RW GP
Sbjct: 88 RYRWRGP 94
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 KWRWP 7
KW++P
Sbjct: 1655 KWKYP 1659
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 KWRWP 7
KW++P
Sbjct: 1655 KWKYP 1659
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 WRWPG 8
WRW G
Sbjct: 281 WRWDG 285
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 WRWPG 8
WRW G
Sbjct: 281 WRWDG 285
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 KWRW 6
KW+W
Sbjct: 1725 KWQW 1728
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 KWRW 6
KW+W
Sbjct: 1745 KWQW 1748
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 KWRW 6
KW+W
Sbjct: 1775 KWQW 1778
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 KWRW 6
KW+W
Sbjct: 1725 KWQW 1728
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 KWRW 6
KW+W
Sbjct: 1745 KWQW 1748
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 KWRW 6
KW+W
Sbjct: 1775 KWQW 1778
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WRWPG 8
WRW G
Sbjct: 14 WRWGG 18
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 3 KWRWPGPP 10
KW W G P
Sbjct: 584 KWIWGGNP 591
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 3 KWRWPGPP 10
KW W G P
Sbjct: 584 KWIWGGNP 591
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 5 RWPGPP 10
RW PP
Sbjct: 101 RWNAPP 106
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 GKWRW 6
G+WRW
Sbjct: 322 GRWRW 326
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 GKWRW 6
G+WRW
Sbjct: 322 GRWRW 326
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 GKWRW 6
G+WRW
Sbjct: 322 GRWRW 326
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 3 KWRWPGPP 10
KW W G P
Sbjct: 584 KWIWGGNP 591
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 GKWRW 6
G+WRW
Sbjct: 322 GRWRW 326
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 GKWRW 6
G+WRW
Sbjct: 322 GRWRW 326
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 GKWRW 6
G+WRW
Sbjct: 322 GRWRW 326
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 GKWRW 6
G+WRW
Sbjct: 322 GRWRW 326
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 GKWRW 6
G+WRW
Sbjct: 322 GRWRW 326
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 3 KWRWPGPP 10
KW W G P
Sbjct: 584 KWIWGGNP 591
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AGKWRWPGP 9
AG W P P
Sbjct: 174 AGAWLLPRP 182
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AGKWRWPGP 9
AG W P P
Sbjct: 174 AGAWLLPRP 182
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GKWRWP 7
G W WP
Sbjct: 736 GLWPWP 741
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 6 WPGPP 10
WPG P
Sbjct: 632 WPGDP 636
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 4 WRWPG 8
WR PG
Sbjct: 428 WRHPG 432
25|SequenceR|130|121|PEQGRAGKWR
>sp|E321_ADE07|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 7
Query: 1 PEQGRAGKWR 10
P+QG WR
Sbjct: 35 PQQGYVTWWR 44
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 QGRAGKWR 10
+GRAG+++
Sbjct: 587 KGRAGRYK 594
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 QGRAGKWR 10
+GRAG+++
Sbjct: 587 KGRAGRYK 594
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 QGRAGKWR 10
+GRAG+++
Sbjct: 587 KGRAGRYK 594
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 QGRAGKWR 10
+GRAG+++
Sbjct: 587 KGRAGRYK 594
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 2 EQGRAGKWR 10
+QGR+G+ R
Sbjct: 236 KQGRSGRLR 244
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 EQGRAGKWR 10
+QGR+G+ R
Sbjct: 236 KQGRSGRLR 244
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 EQGRAGKWR 10
+QGR+G+ R
Sbjct: 236 KQGRSGRLR 244
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 EQGRAGKWR 10
+QGR+G+ R
Sbjct: 236 KQGRSGRLR 244
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 PEQGRAGK 8
PE+ RAG+
Sbjct: 277 PERSRAGE 284
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 PEQGRAGK 8
PE+ RAG+
Sbjct: 277 PERSRAGE 284
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 PEQGRAGK 8
PE+ RAG+
Sbjct: 277 PERSRAGE 284
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 QGRAGKWR 10
+GRAG+++
Sbjct: 590 KGRAGRYQ 597
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GRAGKW 9
GR G W
Sbjct: 162 GRGGAW 167
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GRAGKW 9
GR G W
Sbjct: 162 GRGGAW 167
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GRAGKW 9
GR G W
Sbjct: 162 GRGGAW 167
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 EQGRAGKWR 10
+QGR+G+ R
Sbjct: 236 KQGRSGRIR 244
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 EQGRAGKWR 10
+QGR+G+ R
Sbjct: 236 KQGRSGRIR 244
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 2 EQGRAGKWR 10
+QGR+G R
Sbjct: 235 QQGRSGSLR 243
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 5 RAGKWR 10
R G+WR
Sbjct: 252 RGGRWR 257
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 5 RAGKWR 10
R G+WR
Sbjct: 252 RGGRWR 257
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 PEQGRAGKWR 10
P QG +WR
Sbjct: 60 PTQGLLRRWR 69
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 EQGRAGKWR 10
+QGR+G R
Sbjct: 235 QQGRSGSIR 243
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 EQGRAGKWR 10
+QGR+G R
Sbjct: 235 QQGRSGSIR 243
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 EQGRAGKWR 10
+QGR+G R
Sbjct: 235 QQGRSGSIR 243
26|SequenceR|135|126|GLTESPEQGR
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GLTESPEQGR 10
G+ E P QGR
Sbjct: 290 GVLEPPGQGR 299
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 1 GLTESPEQG 9
G T SPE+G
Sbjct: 127 GFTSSPERG 135
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 1 GLTESPEQG 9
G T SPE+G
Sbjct: 127 GFTSSPERG 135
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 1 GLTESPEQG 9
G E+P+QG
Sbjct: 57 GFFETPKQG 65
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 1 GLTESPEQG 9
G E+P+QG
Sbjct: 57 GFFETPKQG 65
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 1 GLTESPEQG 9
G T SPE+G
Sbjct: 127 GFTSSPERG 135
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 GLTESPEQG 9
LTE+P++G
Sbjct: 674 ALTENPDEG 682
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 GLTESPEQG 9
GLT PE+G
Sbjct: 867 GLTPLPEKG 875
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 668 ALTEDPDEG 676
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 673 ALTEDPDEG 681
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 666 ALTEDPDEG 674
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 667 ALTEDPDEG 675
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 674 ALTEDPDEG 682
>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 338 ALTEDPDEG 346
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GLTESPEQG 9
LTE P++G
Sbjct: 338 ALTEDPDEG 346
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 LTESPEQG 9
LTE P++G
Sbjct: 675 LTEDPDEG 682
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 2 LTESPE 7
LT+SPE
Sbjct: 175 LTDSPE 180
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 GLTESPE 7
GLT SPE
Sbjct: 519 GLTFSPE 525
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 2 LTESPEQGR 10
+TE P+Q R
Sbjct: 555 VTEEPKQNR 563
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 1 GLTESPEQG 9
G+TE+P G
Sbjct: 178 GVTEAPSLG 186
27|SequenceR|140|131|TPNGRGLTES
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 TPNGRGLTES 10
T GRGLTE+
Sbjct: 364 TKEGRGLTET 373
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 TPNGRGLTES 10
T GRGLT++
Sbjct: 364 TKEGRGLTDT 373
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 TPNGRGLTES 10
T GRGLT++
Sbjct: 364 TKEGRGLTDT 373
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 TPNGRGLTE 9
TP G GL+E
Sbjct: 444 TPPGHGLSE 452
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 3 NGRGLTES 10
NGR +TE+
Sbjct: 298 NGRAVTET 305
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 3 NGRGLTES 10
NGR +TE+
Sbjct: 335 NGRAVTET 342
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 3 NGRGLTES 10
NGR +TE+
Sbjct: 329 NGRAVTET 336
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 3 NGRGLTES 10
NGR +TE+
Sbjct: 358 NGRAVTET 365
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 3 NGRGLTES 10
NGR +TE+
Sbjct: 358 NGRAVTET 365
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 TPNGRGLTE 9
TP G GL E
Sbjct: 444 TPTGHGLGE 452
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 5 RGLTES 10
RGLTES
Sbjct: 126 RGLTES 131
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 2 PNGRGLTES 10
P G LTES
Sbjct: 248 PGGNKLTES 256
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 2 PNGRGLTES 10
P G LTES
Sbjct: 248 PGGNKLTES 256
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 2 PNGRGLTES 10
P G LTES
Sbjct: 248 PGGNKLTES 256
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 2 PNGRGLTES 10
P G LTES
Sbjct: 248 PGGNKLTES 256
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 TPNGRG 6
TP GRG
Sbjct: 733 TPQGRG 738
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 TPNGRGLTES 10
TP+G+G+ ++
Sbjct: 663 TPHGKGVMKT 672
>sp|NCAP_TOSV|NUCLEOPROTEIN virus (Tos)
Query: 2 PNGRGLT 8
PNG G T
Sbjct: 164 PNGAGAT 170
28|SequenceR|145|136|FLQLATPNGR
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 LQLATPNGR 10
+Q ATP GR
Sbjct: 176 IQGATPGGR 184
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 LQLATPNGR 10
+Q ATP GR
Sbjct: 176 IQGATPGGR 184
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 LQLATPNGR 10
+Q ATP GR
Sbjct: 176 IQGATPGGR 184
29|SequenceR|150|141|ESIQLFLQLA
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 ESIQLFLQLA 10
ES+Q +LQ A
Sbjct: 772 ESLQAYLQSA 781
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 ESIQLFLQL 9
E+ Q+FLQ+
Sbjct: 375 ETAQIFLQM 383
30|SequenceR|155|146|GKEEEESIQL
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 KEEEESIQL 10
+EE E++QL
Sbjct: 1048 EEENEAVQL 1056
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GKEEEESIQL 10
GK E+E ++L
Sbjct: 645 GKNEQELLEL 654
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GKEEEES 7
GK EEE+
Sbjct: 1666 GKREEET 1672
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 2 KEEEESIQL 10
+EE E +QL
Sbjct: 107 EEEREQVQL 115
31|SequenceR|160|151|GAGRPGKEEE
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 GAGRPGK 7
GAGRPG+
Sbjct: 1001 GAGRPGQ 1007
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 205 GAGKPG 210
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 GAGRPGK 7
GAGRPG+
Sbjct: 1001 GAGRPGQ 1007
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 205 GAGKPG 210
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 GAGRPGK 7
GAGRPG+
Sbjct: 1001 GAGRPGQ 1007
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 205 GAGKPG 210
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 GAGRPGK 7
GAGRPG+
Sbjct: 1002 GAGRPGQ 1008
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 206 GAGKPG 211
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 GAGRPGK 7
GAGRPG+
Sbjct: 1002 GAGRPGQ 1008
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 206 GAGKPG 211
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 GAGRPGK 7
GAGRPG+
Sbjct: 1002 GAGRPGQ 1008
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 206 GAGKPG 211
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 GAGRPGK 7
GAG+PG+
Sbjct: 999 GAGQPGR 1005
Query: 1 GAGRPG 6
G G+PG
Sbjct: 203 GVGKPG 208
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 212 GAGKPG 217
Query: 1 GAGRPGK 7
G+G+PG+
Sbjct: 1008 GSGQPGR 1014
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GAGRPGKE 8
G G+PG++
Sbjct: 373 GGGKPGRD 380
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GAGRPGKE 8
G G+PG++
Sbjct: 373 GGGKPGRD 380
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GAGRPGKE 8
G G+PG++
Sbjct: 373 GGGKPGRD 380
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 GAGRPG 6
G GRPG
Sbjct: 76 GGGRPG 81
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 215 GAGKPG 220
Query: 1 GAGRPGK 7
G+G+PG+
Sbjct: 1009 GSGQPGR 1015
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 215 GAGKPG 220
Query: 1 GAGRPGK 7
G+G+PG+
Sbjct: 1009 GSGQPGR 1015
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 212 GAGKPG 217
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 213 GAGKPG 218
Query: 1 GAGRPGK 7
G+G+PG+
Sbjct: 1008 GSGQPGR 1014
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GAGRPGKEEE 10
AG PG EEE
Sbjct: 355 AAGEPGYEEE 364
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 213 GAGKPG 218
Query: 1 GAGRPGK 7
G+G+PG+
Sbjct: 1008 GSGQPGR 1014
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 206 GAGKPG 211
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GAGRPGKEEE 10
AG PG EEE
Sbjct: 286 AAGEPGYEEE 295
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 1 GAGRPG 6
G GRPG
Sbjct: 76 GGGRPG 81
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 AGRPG 6
AGRPG
Sbjct: 1511 AGRPG 1515
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 AGRPG 6
AGRPG
Sbjct: 1512 AGRPG 1516
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 1005 GAGQPG 1010
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 1005 GAGQPG 1010
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 1006 GAGQPG 1011
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 1005 GAGQPG 1010
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GAGRPG 6
GAG+PG
Sbjct: 1006 GAGQPG 1011
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 GAGRPG 6
G+G+PG
Sbjct: 198 GSGKPG 203
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 GAGRPGKEEE 10
GAG PG ++
Sbjct: 468 GAGVPGSRKD 477
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GAGRPGKEEE 10
GR +EEE
Sbjct: 234 ATGRTSREEE 243
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GAGRPGKEEE 10
GR +EEE
Sbjct: 234 ATGRTSREEE 243
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GRPGKEE 9
GR GK+E
Sbjct: 108 GRSGKQE 114
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 GAGRPGKEEE 10
G+G +EEE
Sbjct: 49 GSGNAAEEEE 58
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GRPGKEE 9
GR GK+E
Sbjct: 108 GRSGKQE 114
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GRPGKEE 9
GR GK+E
Sbjct: 108 GRSGKQE 114
32|SequenceR|165|156|SRGSIGAGRP
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 SRGSIGAGR 9
SRG+ GAG+
Sbjct: 149 SRGTAGAGK 157
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 SRGSIGAGRP 10
SRG +G RP
Sbjct: 780 SRGRLGLSRP 789
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 SRGSIGAGRP 10
SRG +G RP
Sbjct: 780 SRGRLGLSRP 789
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 SRGSIGAGRP 10
SRG +G RP
Sbjct: 780 SRGRLGLSRP 789
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 SRGSIGAGRP 10
SRG +G RP
Sbjct: 780 SRGRLGLSRP 789
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 SRGSIGAGRP 10
SRG +G RP
Sbjct: 793 SRGRLGLSRP 802
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 SRGSIGAGRP 10
SRG +G RP
Sbjct: 786 SRGRLGLSRP 795
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 SRGSIGAGRP 10
SRG +G RP
Sbjct: 793 SRGRLGLSRP 802
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 5 IGAGRP 10
+GAGRP
Sbjct: 13 LGAGRP 18
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 2 RGSIGAGR 9
R +IGAGR
Sbjct: 579 RINIGAGR 586
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 2 RGSIGAGR 9
R +IGAGR
Sbjct: 579 RINIGAGR 586
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 RGSIGAGR 9
R +IGAGR
Sbjct: 579 RINIGAGR 586
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RGSIGAGR 9
R +IGAGR
Sbjct: 579 RINIGAGR 586
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 RGSIGAGR 9
R +IGAGR
Sbjct: 571 RINIGAGR 578
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 2 RGSIGAGR 9
R +IGAGR
Sbjct: 579 RINIGAGR 586
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 2 RGSIGAGR 9
R +IGAGR
Sbjct: 579 RINIGAGR 586
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 2 RGSIGAGR 9
R +IGAGR
Sbjct: 579 RINIGAGR 586
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 2 RGSIGAGR 9
R +IGAGR
Sbjct: 579 RINIGAGR 586
>sp|VP22_VZVD|TEGUMENT protein VP22|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GSIGAGRP 10
G+I +GRP
Sbjct: 148 GAIASGRP 155
>sp|VP22_VZVO|TEGUMENT protein VP22|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GSIGAGRP 10
G+I +GRP
Sbjct: 148 GAIASGRP 155
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SRGSIG 6
SRGS+G
Sbjct: 475 SRGSLG 480
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 SRGSIGAG 8
SRGS G+G
Sbjct: 3009 SRGSSGSG 3016
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 4 SIGAGRP 10
S+G GRP
Sbjct: 48 SLGPGRP 54
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 GSIGAGR 9
GSIG GR
Sbjct: 1841 GSIGLGR 1847
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 GSIGAGR 9
GSIG GR
Sbjct: 1842 GSIGLGR 1848
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 GSIGAGR 9
GSIG GR
Sbjct: 1841 GSIGLGR 1847
33|SequenceR|170|161|VSQEQSRGSI
>sp|PAX_I96A3|PROTEIN PA-X|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 SQEQSRGSI 10
SQEQ GS+
Sbjct: 207 SQEQCAGSL 215
>sp|PAX_I51A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 SQEQSRGSI 10
SQEQ GS+
Sbjct: 207 SQEQCAGSL 215
>sp|PAX_I54A2|PROTEIN PA-X|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 SQEQSRGSI 10
SQEQ GS+
Sbjct: 207 SQEQCAGSL 215
>sp|PAX_I96A2|PROTEIN PA-X|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 SQEQSRGSI 10
SQEQ GS+
Sbjct: 207 SQEQCAGSL 215
>sp|PAX_I83A1|PROTEIN PA-X|Influenza A virus (strain A/Chile/1/1983
Query: 2 SQEQSRGSI 10
SQEQ GS+
Sbjct: 207 SQEQCAGSL 215
>sp|PAX_I80AA|PROTEIN PA-X|Influenza A virus (strain A/India/6263/1980
Query: 2 SQEQSRGSI 10
SQEQ GS+
Sbjct: 207 SQEQCAGSL 215
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 VSQEQSRGSI 10
+SQE +G+I
Sbjct: 139 LSQEHKKGNI 148
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VSQEQSRG 8
++QE++RG
Sbjct: 186 ITQEENRG 193
34|SequenceR|175|166|GPVTKVSQEQ
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 GPVTKVSQEQ 10
GP K SQE+
Sbjct: 880 GPKAKSSQEE 889
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 PVTKVSQEQ 10
P TKV+QE+
Sbjct: 1068 PGTKVTQEE 1076
35|SequenceR|180|171|FLDSAGPVTK
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 LDSAGPVTK 10
DS+ PVTK
Sbjct: 1878 FDSSKPVTK 1886
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 LDSAGPVTK 10
DS+ PVTK
Sbjct: 1878 FDSSKPVTK 1886
>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33
Query: 3 DSAGPVTK 10
D+A P+TK
Sbjct: 235 DTAQPLTK 242
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 LDSAGPVTK 10
+ SAGP+++
Sbjct: 458 VSSAGPISQ 466
>sp|VE8E2_HPV33|PROTEIN E8^E2C|Human papillomavirus 33
Query: 3 DSAGPVTK 10
D+A P+TK
Sbjct: 44 DTAQPLTK 51
36|SequenceR|185|176|RRPWYFLDSA
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 PWYFLDSA 10
PW F+D A
Sbjct: 632 PWKFVDQA 639
>sp|E3B14_ADE07|EARLY E3B 14.9 kDa protein|Human adenovirus B serotype 7
Query: 1 RRPWYFLD 8
++PW FLD
Sbjct: 36 QQPWSFLD 43
>sp|E3B14_ADE03|EARLY E3B 14.5 kDa protein|Human adenovirus B serotype 3
Query: 1 RRPWYFLD 8
++PW FLD
Sbjct: 36 QQPWSFLD 43
>sp|E3B14_ADE12|EARLY E3B 12.7 kDa protein|Human adenovirus A serotype 12
Query: 1 RRPWYFLD 8
+PW FLD
Sbjct: 22 HKPWNFLD 29
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RRPWYFLD 8
RR W FL+
Sbjct: 921 RRAWNFLE 928
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RRPWYFLD 8
RR W FL+
Sbjct: 921 RRAWNFLE 928
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RRPWYFLD 8
RR W FL+
Sbjct: 921 RRAWNFLE 928
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RRPWYFLD 8
RR W FL+
Sbjct: 921 RRAWNFLE 928
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 RPWYFLD 8
R W+F++
Sbjct: 616 RAWFFME 622
Query: 1 RRPWYFLDS 9
R+P YF +S
Sbjct: 2094 RKPGYFPES 2102
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 RRPWYFLDS 9
R+P YF +S
Sbjct: 2102 RKPGYFPES 2110
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 RRPWYFLDS 9
R+P YF +S
Sbjct: 2093 RKPGYFPES 2101
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 RRPWYFLDSA 10
R P YF SA
Sbjct: 560 RHPVYFFKSA 569
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RRPWYFLDSA 10
R P YF SA
Sbjct: 560 RHPVYFFKSA 569
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RRPWYFLDSA 10
R P YF SA
Sbjct: 560 RHPVYFFKSA 569
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 3 PWYFLD 8
PW +LD
Sbjct: 313 PWRYLD 318
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 3 PWYFLD 8
PW +LD
Sbjct: 313 PWRYLD 318
>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)
Query: 2 RPWYFL 7
R WYF+
Sbjct: 32 RYWYFV 37
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 RRPWYF 6
+R WYF
Sbjct: 205 QRRWYF 210
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 WYFLDS 9
W F+DS
Sbjct: 269 WTFIDS 274
37|SequenceR|190|181|QLKGARRPWY
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 GARRPW 9
GARR W
Sbjct: 3704 GARRVW 3709
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 GARRPW 9
GARR W
Sbjct: 3704 GARRVW 3709
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2976 KGSRAIWY 2983
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2976 KGSRAIWY 2983
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2976 KGSRAIWY 2983
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2977 KGSRAIWY 2984
Query: 1 QLKGARR 7
+KGARR
Sbjct: 1478 HIKGARR 1484
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2976 KGSRAIWY 2983
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2976 KGSRAIWY 2983
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2977 KGSRAIWY 2984
Query: 1 QLKGARR 7
+KGARR
Sbjct: 1478 HIKGARR 1484
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2969 KGSRAIWY 2976
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2976 KGSRAIWY 2983
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2977 KGSRAIWY 2984
Query: 1 QLKGARR 7
+KGARR
Sbjct: 1478 HIKGARR 1484
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2958 KGSRAIWY 2965
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2995 KGSRAIWY 3002
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2960 KGSRAIWY 2967
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2957 KGSRAIWY 2964
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2960 KGSRAIWY 2967
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2960 KGSRAIWY 2967
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2960 KGSRAIWY 2967
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2960 KGSRAIWY 2967
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2956 KGSRAIWY 2963
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2956 KGSRAIWY 2963
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2960 KGSRAIWY 2967
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2956 KGSRAIWY 2963
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2958 KGSRAIWY 2965
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2956 KGSRAIWY 2963
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2958 KGSRAIWY 2965
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2958 KGSRAIWY 2965
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2961 KGSRAIWY 2968
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2956 KGSRAIWY 2963
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2960 KGSRAIWY 2967
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2978 KGSRAIWY 2985
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2958 KGSRAIWY 2965
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2958 KGSRAIWY 2965
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2961 KGSRAIWY 2968
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2993 KGSRAIWY 3000
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2991 KGSRAIWY 2998
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2989 KGSRAIWY 2996
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2986 KGSRAIWY 2993
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2990 KGSRAIWY 2997
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2990 KGSRAIWY 2997
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2991 KGSRAIWY 2998
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2981 KGSRAIWY 2988
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2979 KGSRAIWY 2986
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2981 KGSRAIWY 2988
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2981 KGSRAIWY 2988
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 3 KGARRPW 9
KGAR P+
Sbjct: 306 KGARAPF 312
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 3 KGARRPW 9
KGAR P+
Sbjct: 306 KGARAPF 312
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 3 KGARRPW 9
KGAR P+
Sbjct: 306 KGARAPF 312
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2981 KGSRAIWY 2988
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2981 KGSRAIWY 2988
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2982 KGSRAIWY 2989
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2983 KGSRAIWY 2990
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2983 KGSRAIWY 2990
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 KGARRPWY 10
KG+R WY
Sbjct: 2981 KGSRAIWY 2988
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 KGARRPW 9
+G RR W
Sbjct: 38 RGTRRSW 44
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 4 GARRPW 9
G R PW
Sbjct: 278 GGRGPW 283
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 4 GARRPW 9
G R PW
Sbjct: 278 GGRGPW 283
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LKGARRPW 9
LKG +R W
Sbjct: 778 LKGLQRGW 785
38|SequenceR|195|186|KHHSGQLKGA
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 KHHSGQL 7
K+HSG+L
Sbjct: 370 KYHSGRL 376
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 KHHSGQL 7
K+HSG+L
Sbjct: 370 KYHSGRL 376
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 KHHSGQL 7
K+HSG+L
Sbjct: 370 KYHSGRL 376
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 KHHSGQL 7
K+HSG+L
Sbjct: 370 KYHSGRL 376
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 KHHSGQL 7
K+HSG+L
Sbjct: 370 KYHSGRL 376
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 KHHSGQL 7
K+HSG+L
Sbjct: 370 KYHSGRL 376
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 KHHSGQL 7
K+HSG+L
Sbjct: 370 KYHSGRL 376
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 KHHSGQL 7
K+HSG+L
Sbjct: 370 KYHSGRL 376
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 KHHSGQL 7
K+HSG+L
Sbjct: 349 KYHSGRL 355
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 KHHSGQL 7
K+HSG+L
Sbjct: 370 KYHSGRL 376
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 KHHSGQL 7
K+HSG+L
Sbjct: 370 KYHSGRL 376
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 KHHSGQL 7
K+HSG+L
Sbjct: 370 KYHSGRL 376
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 KHHSGQLK 8
++H G+LK
Sbjct: 73 RYHKGELK 80
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 1 KHHSGQLKGA 10
KH G KGA
Sbjct: 126 KHRDGFTKGA 135
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 KHHSGQLKGA 10
KH G KGA
Sbjct: 126 KHRDGFTKGA 135
>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 KHHSGQLKGA 10
KH G KGA
Sbjct: 123 KHRDGFTKGA 132
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KHHSGQLKGA 10
KH G KGA
Sbjct: 126 KHRDGFTKGA 135
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 3 HSGQLKG 9
H GQ KG
Sbjct: 377 HKGQYKG 383
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 3 HSGQLKG 9
H GQ KG
Sbjct: 377 HKGQYKG 383
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 1 KHHSGQLKGA 10
KH G KGA
Sbjct: 126 KHSDGFTKGA 135
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 1 KHHSGQLK 8
+ HSG+LK
Sbjct: 355 RDHSGRLK 362
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 HSGQLKG 9
H G++KG
Sbjct: 1048 HHGEVKG 1054
39|SequenceR|200|191|TKSLPKHHSG
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 4 LPKHHS 9
+P+HHS
Sbjct: 389 MPRHHS 394
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LPKHHS 9
+P+HHS
Sbjct: 389 MPRHHS 394
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 4 LPKHHS 9
+P+HHS
Sbjct: 389 MPRHHS 394
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 3 SLPKHH 8
+ PKHH
Sbjct: 665 TFPKHH 670
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 LPKHHSG 10
LP H+SG
Sbjct: 1284 LPTHYSG 1290
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 LPKHHSG 10
LP H+SG
Sbjct: 1284 LPTHYSG 1290
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 LPKHHSG 10
LP H+SG
Sbjct: 1284 LPTHYSG 1290
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 LPKHHSG 10
LP H+SG
Sbjct: 1284 LPTHYSG 1290
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 LPKHHSG 10
LP H+SG
Sbjct: 1284 LPTHYSG 1290
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 2 KSLPKHHS 9
+S P++HS
Sbjct: 244 ESFPRYHS 251
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 2 KSLPKHHS 9
+S P++HS
Sbjct: 244 ESFPRYHS 251
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 KSLPKHHS 9
+S P++HS
Sbjct: 244 ESFPRYHS 251
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 KSLPKHHS 9
+S P++HS
Sbjct: 244 ESFPRYHS 251
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 KSLPKHHS 9
+S PK HS
Sbjct: 2072 RSYPKQHS 2079
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 KSLPKHHS 9
+S PK HS
Sbjct: 2072 RSYPKQHS 2079
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 KSLPKHHS 9
+S PK HS
Sbjct: 2033 RSYPKQHS 2040
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 SLPKHHSG 10
S+P+ H G
Sbjct: 35 SIPRKHGG 42
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 SLPKHHSG 10
S+P+ H G
Sbjct: 35 SIPRKHGG 42
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 KSLPKHHS 9
+S PK HS
Sbjct: 2073 RSYPKQHS 2080
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 KSLPKHHS 9
+ PKHH+
Sbjct: 708 RCYPKHHA 715
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 KSLPKHHS 9
+S PK HS
Sbjct: 2036 RSFPKKHS 2043
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 KSLPKHHS 9
+ PKHH+
Sbjct: 2039 RCYPKHHA 2046
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 KSLPKHHS 9
+S PK HS
Sbjct: 2033 RSFPKKHS 2040
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KSLPKHHS 9
+S PK HS
Sbjct: 2047 RSFPKKHS 2054
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 KSLPKHHS 9
+ PKHH+
Sbjct: 2026 RCYPKHHA 2033
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 KSLPKHHS 9
+S PK HS
Sbjct: 2056 RSFPKKHS 2063
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KSLPKHHS 9
+S PK HS
Sbjct: 2055 RSFPKKHS 2062
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 KSLPKHHS 9
+ PKHH+
Sbjct: 2026 RCYPKHHA 2033
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KSLPKHHS 9
+S PK HS
Sbjct: 2055 RSFPKKHS 2062
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 KSLPKHHS 9
+ PKHH+
Sbjct: 1988 RCYPKHHA 1995
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 KSLPKHHS 9
+ PKHH+
Sbjct: 1996 RCYPKHHA 2003
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 KSLPKHHS 9
+S PK HS
Sbjct: 1970 RSFPKTHS 1977
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 KSLPKHHS 9
+S PK HS
Sbjct: 2029 RSYPKKHS 2036
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 KSLPKHH 8
KSL KHH
Sbjct: 22 KSLVKHH 28
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 TKSLPK 6
TK+LPK
Sbjct: 2202 TKTLPK 2207
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 KSLPKH 7
KSLP H
Sbjct: 41 KSLPSH 46
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 4 LPKHH 8
+P+HH
Sbjct: 195 IPRHH 199
40|SequenceR|205|196|ALGNATKSLP
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ALGNATKSLP 10
A GN T +LP
Sbjct: 402 ATGNDTITLP 411
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 GNATKSL 9
GNA KSL
Sbjct: 427 GNAPKSL 433
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 GNATKSL 9
GNA KSL
Sbjct: 427 GNAPKSL 433
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 GNATKSL 9
GNA KSL
Sbjct: 427 GNAPKSL 433
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ALGNATK 7
+LGNAT+
Sbjct: 44 SLGNATQ 50
41|SequenceR|210|201|WGEHGALGNA
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 WGEHGALGNA 10
WGE GAL A
Sbjct: 2461 WGEAGALITA 2470
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 WGEHGALGNA 10
WGE GAL A
Sbjct: 2461 WGEAGALITA 2470
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 WGEHGALGNA 10
WGE GAL A
Sbjct: 2457 WGEAGALITA 2466
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 WGEHGAL 7
WG HG L
Sbjct: 234 WGWHGEL 240
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 WGEHGALGNA 10
W E G LG+A
Sbjct: 2448 WSELGVLGSA 2457
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 2 GEHGALGN 9
GEH A GN
Sbjct: 162 GEHWAKGN 169
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 WGEHG 5
W EHG
Sbjct: 152 WNEHG 156
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 3 EHGALG 8
+HGALG
Sbjct: 578 DHGALG 583
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 4 HGALGN 9
HGA GN
Sbjct: 990 HGAAGN 995
Query: 4 HGALG 8
HGALG
Sbjct: 810 HGALG 814
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 HGALGN 9
HGA GN
Sbjct: 990 HGAAGN 995
Query: 4 HGALG 8
HGALG
Sbjct: 810 HGALG 814
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HGALG 8
HGALG
Sbjct: 363 HGALG 367
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 HGALGNA 10
G+LGNA
Sbjct: 42 QGSLGNA 48
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 HGALG 8
HGALG
Sbjct: 363 HGALG 367
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 2 GEHGALGNA 10
G+HG G+A
Sbjct: 419 GDHGIRGSA 427
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 4 HGALGNA 10
HG +GN
Sbjct: 157 HGTMGNG 163
42|SequenceR|215|206|PLAITWGEHG
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 1 PLAITWGEH 9
P ITWG H
Sbjct: 184 PALITWGIH 192
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 1 PLAITWGE 8
PLA WGE
Sbjct: 305 PLAYNWGE 312
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 PLAITW 6
PLA+TW
Sbjct: 92 PLAVTW 97
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PLAITW 6
PLA+TW
Sbjct: 87 PLAVTW 92
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 PLAITW 6
PLA+TW
Sbjct: 86 PLAVTW 91
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 1 PLAITW 6
PLA+TW
Sbjct: 93 PLAVTW 98
>sp|PB2_I82A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Camel/Mongolia/1982
Query: 1 PLAITW 6
PLA+TW
Sbjct: 32 PLAVTW 37
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 5 TWGEHG 10
TWG HG
Sbjct: 233 TWGWHG 238
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PLAITW 6
PL++TW
Sbjct: 530 PLSVTW 535
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 PLAITW 6
PL++TW
Sbjct: 530 PLSVTW 535
>sp|GQ2_HHV6U|GLYCOPROTEIN Q2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PLAITW 6
PL++TW
Sbjct: 88 PLSVTW 93
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIVWGIH 192
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIVWGIH 192
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIVWGIH 192
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIVWGIH 192
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIIWGIH 192
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIIWGIH 192
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIIWGIH 192
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIIWGIH 192
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIIWGIH 192
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIIWGIH 192
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIIWGIH 192
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIIWGIH 192
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 1 PLAITWGEH 9
P I WG H
Sbjct: 184 PALIIWGIH 192
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 LAITWGEH 9
L TWG H
Sbjct: 647 LEYTWGNH 654
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 LAITWGEH 9
L TWG H
Sbjct: 646 LEYTWGNH 653
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 LAITWGEH 9
L TWG H
Sbjct: 645 LEYTWGNH 652
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 3 AITWGEH 9
I WG H
Sbjct: 316 GICWGNH 322
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 TWGEH 9
TWG H
Sbjct: 650 TWGNH 654
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 TWGEH 9
TWG H
Sbjct: 650 TWGNH 654
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 6 WGEHG 10
WGE G
Sbjct: 394 WGERG 398
>sp|PHOSP_ABLVB|PHOSPHOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 PLAITW 6
PLA+ W
Sbjct: 181 PLALDW 186
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 3 AITWGEH 9
I WG H
Sbjct: 319 GICWGNH 325
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 LAITWGEH 9
L I WG H
Sbjct: 188 LLILWGIH 195
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LAITWGEH 9
L I WG H
Sbjct: 188 LLILWGIH 195
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LAITWGEH 9
L I WG H
Sbjct: 188 LLILWGIH 195
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 LAITWGEH 9
L I WG H
Sbjct: 188 LLILWGIH 195
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 5 TWGE 8
TWGE
Sbjct: 218 TWGE 221
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 5 TWGE 8
TWGE
Sbjct: 218 TWGE 221
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 2 LAITWGEH 9
L I WG H
Sbjct: 188 LLILWGIH 195
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 2 LAITWGEH 9
L I WG H
Sbjct: 186 LLILWGIH 193
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 2 LAITW 6
LA+TW
Sbjct: 86 LAVTW 90
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LAITW 6
LAITW
Sbjct: 5 LAITW 9
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 5 TWGEH 9
TWG H
Sbjct: 250 TWGMH 254
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 AITWGEH 9
A+ W EH
Sbjct: 2274 AVLWSEH 2280
43|SequenceR|220|211|ALARGPLAIT
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 1 ALARGPLAI 9
A ARGP+AI
Sbjct: 271 AAARGPIAI 279
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 1 ALARGPLAI 9
A ARGP+AI
Sbjct: 269 AAARGPIAI 277
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 1 ALARGPLAI 9
A ARGP+AI
Sbjct: 269 AAARGPIAI 277
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 RGPLAIT 10
+GP+AIT
Sbjct: 1934 QGPIAIT 1940
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 5 GPLAIT 10
GP+AIT
Sbjct: 1944 GPMAIT 1949
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 ARGPLA 8
ARGP+A
Sbjct: 1992 ARGPVA 1997
44|SequenceR|225|216|LSGNQALARG
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 SGNQALAR 9
SGN ALAR
Sbjct: 6690 SGNDALAR 6697
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 SGNQALARG 10
SG+ ALARG
Sbjct: 407 SGSVALARG 415
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 GNQALARG 10
GN A ARG
Sbjct: 1298 GNSAEARG 1305
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 GNQALARG 10
GN A ARG
Sbjct: 1298 GNSAEARG 1305
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 GNQALARG 10
GN A ARG
Sbjct: 1298 GNSAEARG 1305
>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1
Query: 3 GNQALARG 10
G QA+ RG
Sbjct: 158 GQQAVVRG 165
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 LSGNQAL 7
LSGN+A+
Sbjct: 248 LSGNRAI 254
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 LSGNQAL 7
LSGN+A+
Sbjct: 248 LSGNRAI 254
45|SequenceR|230|221|HIGEGLSGNQ
>sp|LF2_EBVG|PROTEIN LF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HI-GEGLSGNQ 10
HI GEG+SG +
Sbjct: 222 HIPGEGMSGQR 232
>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 4 EGLSGNQ 10
EGLSG Q
Sbjct: 128 EGLSGEQ 134
>sp|PHOSP_VSIVM|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 4 EGLSGNQ 10
EGLSG Q
Sbjct: 128 EGLSGEQ 134
>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 4 EGLSGNQ 10
EGLSG Q
Sbjct: 128 EGLSGEQ 134
>sp|PHOSP_VSIVC|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 4 EGLSGNQ 10
EGLSG Q
Sbjct: 128 EGLSGEQ 134
>sp|PHOSP_VSIVS|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 4 EGLSGNQ 10
EGLSG Q
Sbjct: 128 EGLSGEQ 134
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 GEGLSGNQ 10
EGL+G+Q
Sbjct: 488 AEGLAGDQ 495
>sp|PHOSP_VSIVG|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 4 EGLSGNQ 10
EGLSG Q
Sbjct: 128 EGLSGEQ 134
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 2 IGEGLSGN 9
+G G+SGN
Sbjct: 113 LGVGISGN 120
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 2 IGEGLSGN 9
+G G+SGN
Sbjct: 120 LGVGVSGN 127
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 4 EGLSGNQ 10
EGL+G Q
Sbjct: 661 EGLAGEQ 667
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 EGLSGNQ 10
+GL GNQ
Sbjct: 1149 KGLGGNQ 1155
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 EGLSGNQ 10
+GL GNQ
Sbjct: 1148 KGLGGNQ 1154
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 2 IGEGLSGN 9
+G GLSG+
Sbjct: 112 LGAGLSGH 119
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 2 IGEGLSGN 9
+G GLSG+
Sbjct: 147 LGAGLSGH 154
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 IGEGLSGNQ 10
IGE GNQ
Sbjct: 521 IGENGEGNQ 529
>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 81 HLGQGVS 87
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 EGLSGN 9
EGL GN
Sbjct: 2634 EGLGGN 2639
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 EGLSGN 9
EGL GN
Sbjct: 2634 EGLGGN 2639
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G+G+S
Sbjct: 80 HLGQGVS 86
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 HIGEGLSGNQ 10
++G G+S +Q
Sbjct: 495 YVGGGISNDQ 504
>sp|VIF_HV1MV|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G G+S
Sbjct: 80 HLGHGVS 86
>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 HIGEGLS 7
H+G G+S
Sbjct: 80 HLGHGVS 86
46|SequenceR|235|226|PGGPEHIGEG
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GGPEHIGEG 10
GG EH GEG
Sbjct: 472 GGEEHTGEG 480
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 GGPEHIGEG 10
G P H GE
Sbjct: 2008 GAPNHFGEA 2016
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 PGGPEH 6
PG PEH
Sbjct: 575 PGEPEH 580
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 PGGPEHIG 8
PG P H G
Sbjct: 756 PGSPPHSG 763
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 GGPEHIGEG 10
G P H GE
Sbjct: 2008 GAPVHFGEA 2016
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 GPEHIGEG 10
GPE+ GEG
Sbjct: 27 GPENAGEG 34
>sp|VE6_HPV20|PROTEIN E6|Human papillomavirus 20
Query: 3 GPEHIGEG 10
GP +IGE
Sbjct: 14 GPSNIGEA 21
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PGGPEH 6
P GP+H
Sbjct: 592 PSGPQH 597
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 PGGPEH 6
P GPEH
Sbjct: 1786 PDGPEH 1791
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PGGPE 5
PGGPE
Sbjct: 236 PGGPE 240
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 288 PSHEGEG 294
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 291 PSHEGEG 297
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 288 PSHEGEG 294
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 PGGPEH 6
P GPEH
Sbjct: 1783 PDGPEH 1788
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PNHEGEG 301
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PNHEGEG 301
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 272 PSHEGEG 278
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PNHEGEG 301
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 4 PEHIGEG 10
P H GEG
Sbjct: 295 PSHEGEG 301
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GGPEHIGEG 10
GG EH G+G
Sbjct: 472 GGEEHTGKG 480
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 PGGPEHI 7
P GP HI
Sbjct: 259 PAGPGHI 265
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 PGGPEHI 7
PG P HI
Sbjct: 407 PGTPLHI 413
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 PGGPEHI 7
PG P HI
Sbjct: 407 PGTPLHI 413
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PGGPEHI 7
PG P HI
Sbjct: 407 PGTPLHI 413
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GGPEHIGE 9
GP H+G+
Sbjct: 1040 AGPRHLGK 1047
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain
Query: 1 PGGPEHIGEG 10
P GP G G
Sbjct: 26 PAGPRGAGRG 35
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 PGGPEHIGEG 10
P GP G G
Sbjct: 26 PAGPRGAGRG 35
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 PGGPEHIGEG 10
P GP G G
Sbjct: 26 PAGPRGAGRG 35
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 2 GGPEHIGEG 10
G PE+ G+G
Sbjct: 152 GDPENGGDG 160
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 PGGPEHIGEG 10
PG +H G G
Sbjct: 150 PGDAQHEGGG 159
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 4 PEHIGE 9
P HIGE
Sbjct: 178 PVHIGE 183
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 GPEHIGEG 10
GPE+ GEG
Sbjct: 27 GPENAGEG 34
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 PGGPEHI 7
PG P H+
Sbjct: 1459 PGAPVHL 1465
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PGGPEHI 7
P GPE +
Sbjct: 1909 PDGPERV 1915
>sp|VIF_HV1MV|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 EHIGEG 10
EH+G G
Sbjct: 79 EHLGHG 84
>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 EHIGEG 10
EH+G G
Sbjct: 79 EHLGHG 84
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PGGPEHI 7
P GPE +
Sbjct: 1909 PDGPERV 1915
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PGGPEHIG 8
PG P H G
Sbjct: 68 PGRPSHRG 75
47|SequenceR|240|231|SNGRRPGGPE
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SNGRRPGGPE 10
S GR PGG E
Sbjct: 54 STGRAPGGDE 63
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 RPGGPE 10
RPGGPE
Sbjct: 235 RPGGPE 240
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 GRRPG 7
GRRPG
Sbjct: 989 GRRPG 993
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 GRRPG 7
GRRPG
Sbjct: 989 GRRPG 993
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 GRRPG 7
GRRPG
Sbjct: 989 GRRPG 993
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 4 RRPGGP 9
R PGGP
Sbjct: 269 RTPGGP 274
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 4 RRPGGPE 10
RRP GP+
Sbjct: 419 RRPCGPQ 425
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 4 RRPGGPE 10
RRP GP+
Sbjct: 418 RRPCGPQ 424
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 4 RRPGGPE 10
RRP GP+
Sbjct: 418 RRPCGPQ 424
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 SNGRRP 6
S+GRRP
Sbjct: 23 SSGRRP 28
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SNGRRP 6
S+GRRP
Sbjct: 23 SSGRRP 28
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 4 RRPGGP 9
R PGGP
Sbjct: 269 RLPGGP 274
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|VE6_HPV51|PROTEIN E6|Human papillomavirus 51
Query: 4 RRPGGPE 10
+RP GPE
Sbjct: 107 QRPLGPE 113
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
Query: 3 GRRPGG 8
G RPGG
Sbjct: 3053 GTRPGG 3058
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 2 NGRRPGG 8
NG+ PGG
Sbjct: 528 NGKMPGG 534
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 2 NGRRPGG 8
NG+ PGG
Sbjct: 528 NGKMPGG 534
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 2 NGRRPGG 8
NG+ PGG
Sbjct: 528 NGKMPGG 534
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 4 RRPGGP 9
R PGGP
Sbjct: 144 RAPGGP 149
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 3 GRRPG 7
GRRPG
Sbjct: 138 GRRPG 142
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 2 NGRRPGG 8
NG+ PGG
Sbjct: 528 NGKMPGG 534
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 4 RRPGGP 9
R PGGP
Sbjct: 144 RAPGGP 149
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 4 RRPGGP 9
R PGGP
Sbjct: 144 RAPGGP 149
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 6 PGGPE 10
PGGP+
Sbjct: 724 PGGPD 728
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 RRPGG 8
RRPGG
Sbjct: 3048 RRPGG 3052
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 4 RRPGGP 9
R PGGP
Sbjct: 137 RAPGGP 142
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 3 GRRPG 7
GRRPG
Sbjct: 142 GRRPG 146
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 NGRRPGGP 9
+G RP GP
Sbjct: 761 SGARPAGP 768
Query: 3 GRRPGG 8
G RPGG
Sbjct: 808 GHRPGG 813
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GRRPG 7
GRRPG
Sbjct: 142 GRRPG 146
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 GRRPGG 8
G RPGG
Sbjct: 824 GHRPGG 829
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 4 RRPGGP 9
RRPG P
Sbjct: 8 RRPGTP 13
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 3 GRRPGGP 9
R+PGGP
Sbjct: 259 ARKPGGP 265
Query: 2 NGRRPG--GPE 10
GRRPG GPE
Sbjct: 1110 EGRRPGAAGPE 1120
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 3 GRRPGGP 9
R+PGGP
Sbjct: 259 ARKPGGP 265
Query: 2 NGRRPG--GPE 10
GRRPG GPE
Sbjct: 1110 EGRRPGAAGPE 1120
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 GRRPGG 8
G RPGG
Sbjct: 825 GHRPGG 830
>sp|EBNA2_EBVG|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 RRPGGP 9
R+PGGP
Sbjct: 329 RKPGGP 334
>sp|EBNA2_EBVB9|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 RRPGGP 9
R+PGGP
Sbjct: 365 RKPGGP 370
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 SNGRRPGG 8
S+G RP G
Sbjct: 1507 SSGERPSG 1514
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 SNGRRPGG 8
S+G RP G
Sbjct: 1507 SSGERPSG 1514
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 RRPGGP 9
++PGGP
Sbjct: 3 KKPGGP 8
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 5 RPGGPE 10
RPGGP+
Sbjct: 2353 RPGGPD 2358
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 1 SNGRRP 6
SNGR P
Sbjct: 314 SNGREP 319
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 SNGRRPGG 8
S+G RP G
Sbjct: 1504 SSGERPSG 1511
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SNGRRPGG 8
S G RP G
Sbjct: 1508 SQGERPSG 1515
48|SequenceR|245|236|VRRNTSNGRR
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VRRNTSNGRR 10
+ +NT+N RR
Sbjct: 2482 IMKNTTNARR 2491
>sp|US36_HCMVA|UNCHARACTERIZED protein US36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RNTSNGRR 10
RN SN RR
Sbjct: 13 RNASNNRR 20
>sp|B7_HHV6Z|PROTEIN B7|Human herpesvirus 6B (strain Z29)
Query: 4 NTSNGRR 10
NTS+GR+
Sbjct: 44 NTSDGRQ 50
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 VRRNTSNG 8
V+R SNG
Sbjct: 727 VKRTNSNG 734
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 VRRNTSN 7
VR+NT+N
Sbjct: 504 VRQNTAN 510
49|SequenceR|250|241|PNKLRVRRNT
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 PNKLRVRRN 9
P +LR +RN
Sbjct: 1099 PKRLRKKRN 1107
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 PNKLRVRRN 9
P +LR +RN
Sbjct: 1099 PKRLRKKRN 1107
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 LRVRRNT 10
++VRRNT
Sbjct: 1835 IKVRRNT 1841
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PNKLRVRRNT 10
P+ +RV+ NT
Sbjct: 653 PDLMRVQNNT 662
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PNKLRVRRNT 10
P+ +RV NT
Sbjct: 653 PDLMRVHNNT 662
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PNKLRVRRNT 10
P+ +RV NT
Sbjct: 653 PDLMRVHNNT 662
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PNKLRVRRNT 10
P+ +RV NT
Sbjct: 653 PDLMRVHNNT 662
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PNKLRVRRNT 10
P+ +RV NT
Sbjct: 653 PDLMRVHNNT 662
50|SequenceR|255|246|TLPYFPNKLR
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 LPYFPNKL 9
L +FPNK+
Sbjct: 1041 LSFFPNKV 1048
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 LPYFPNKL 9
L +FPNK+
Sbjct: 1041 LSFFPNKV 1048
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 LPYFPNKL 9
L +FPNK+
Sbjct: 1041 LSFFPNKV 1048
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TLPYFPNKL 9
++PY PN +
Sbjct: 4656 SMPYHPNTV 4664
>sp|B8_HHV6Z|PROTEIN B8|Human herpesvirus 6B (strain Z29)
Query: 1 TLPYFPNKLR 10
+P FP+KL+
Sbjct: 255 AVPVFPHKLK 264
Query: 1 TLPYFPNKLR 10
P FP+KL+
Sbjct: 185 AFPVFPHKLK 194
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 TLPYFPNK 8
T YFP+K
Sbjct: 491 TFSYFPDK 498
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 5 FPNKL 9
FPNKL
Sbjct: 582 FPNKL 586
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 5 FPNKL 9
FPNKL
Sbjct: 533 FPNKL 537
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 5 FPNKL 9
FPNKL
Sbjct: 548 FPNKL 552
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 2 LPYFPNK 8
LPY P K
Sbjct: 249 LPYNPTK 255
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 4 YFPNK 8
YFPNK
Sbjct: 619 YFPNK 623
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 TLPYFPN 7
+LPY PN
Sbjct: 99 SLPYQPN 105
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 4 YFPNK 8
YFPNK
Sbjct: 619 YFPNK 623
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 1 TLPYFPNKL 9
TLP FP+ +
Sbjct: 188 TLPRFPSTI 196
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 LPYFPNKL 9
+P+FP L
Sbjct: 587 VPFFPETL 594
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 PYFPNKLR 10
PY+P++ +
Sbjct: 943 PYYPSRFQ 950
>sp|VE8E2_HPV35|PROTEIN E8^E2C|Human papillomavirus 35
Query: 2 LPYFPNK 8
LPY P K
Sbjct: 60 LPYNPTK 66
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 YFPNKL 9
YF NKL
Sbjct: 4534 YFENKL 4539
51|SequenceR|260|251|GYSEQTLPYF
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 GYSEQTLPYF 10
GY+E P+F
Sbjct: 615 GYAESVYPFF 624
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YSEQTLPY 9
Y E T+PY
Sbjct: 941 YEESTVPY 948
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 YSEQTLPYF 10
++EQT P+F
Sbjct: 23 WTEQTDPWF 31
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 YSEQTLPYF 10
++EQT P+F
Sbjct: 23 WTEQTDPWF 31
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 YSEQTLPYF 10
++EQT P+F
Sbjct: 23 WTEQTDPWF 31
52|SequenceR|265|256|MVAYAGYSEQ
>sp|UL01_HCMVM|GLYCOPROTEIN UL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 YAGYSE 9
YAGYSE
Sbjct: 90 YAGYSE 95
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 2 VAYAGYSEQ 10
V AGYSEQ
Sbjct: 68 VDVAGYSEQ 76
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 MVAYAGYSE 9
+++Y+GY E
Sbjct: 1448 LISYSGYKE 1456
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 YAGYSEQ 10
YAG SEQ
Sbjct: 1533 YAGCSEQ 1539
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 MVAYAGYSE 9
M+AY Y E
Sbjct: 958 MMAYQAYDE 966
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 MVAYAGYSE 9
++ Y+GY E
Sbjct: 1445 LIRYSGYRE 1453
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 YAGYSEQ 10
Y GY EQ
Sbjct: 762 YDGYDEQ 768
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 VAYAGYSE 9
++Y GYS+
Sbjct: 271 ISYPGYSQ 278
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 2 VAYAGYSE 9
++Y GYS+
Sbjct: 271 ISYPGYSQ 278
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VAYAGYSE 9
++Y GYS+
Sbjct: 271 ISYPGYSQ 278
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VAYAGYSE 9
++Y GYS+
Sbjct: 271 ISYPGYSQ 278
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 2 VAYAGYSE 9
++Y GYS+
Sbjct: 271 ISYPGYSQ 278
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 2 VAYAGYSE 9
++Y GYS+
Sbjct: 271 ISYPGYSQ 278
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 YAGYSEQ 10
Y GY EQ
Sbjct: 712 YQGYQEQ 718
Query: 4 YAGYSEQ 10
Y GY EQ
Sbjct: 725 YQGYQEQ 731
Query: 4 YAGYSEQ 10
Y GY EQ
Sbjct: 738 YQGYQEQ 744
Query: 4 YAGYSEQ 10
Y GY EQ
Sbjct: 751 YQGYQEQ 757
Query: 4 YAGYSEQ 10
Y GY EQ
Sbjct: 764 YQGYQEQ 770
Query: 4 YAGYSEQ 10
Y GY EQ
Sbjct: 777 YQGYQEQ 783
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 6 GYSEQ 10
GYSEQ
Sbjct: 1036 GYSEQ 1040
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 6 GYSEQ 10
GYSEQ
Sbjct: 1036 GYSEQ 1040
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 6 GYSEQ 10
GYSEQ
Sbjct: 1036 GYSEQ 1040
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 6 GYSEQ 10
GYSEQ
Sbjct: 1036 GYSEQ 1040
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 6 GYSEQ 10
GYSEQ
Sbjct: 1036 GYSEQ 1040
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 6 GYSEQ 10
GYSEQ
Sbjct: 1036 GYSEQ 1040
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 6 GYSEQ 10
GYSEQ
Sbjct: 1036 GYSEQ 1040
53|SequenceR|270|261|VVSLCMVAYA
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 VVSLCM 6
+VSLCM
Sbjct: 1184 IVSLCM 1189
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 VSLCMVAYA 10
+ LC+++YA
Sbjct: 17 MDLCLLSYA 25
>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain
Query: 1 VVSLCMVAY 9
++S+C+VA+
Sbjct: 282 LISMCIVAF 290
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 LCMVAY 9
+CM AY
Sbjct: 1471 MCMAAY 1476
>sp|VE5_HPV18|PROBABLE protein E5|Human papillomavirus type 18
Query: 3 SLCMVAYA 10
S+CM AYA
Sbjct: 25 SVCMCAYA 32
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 4 LCMVAYA 10
LC V YA
Sbjct: 49 LCAVGYA 55
>sp|OX2V_HHV6U|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6A (strain
Query: 1 VVSLCMVAY 9
++S+C+VA+
Sbjct: 280 LISVCIVAF 288
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 1 VVSLCMVAY 9
+V CM AY
Sbjct: 177 MVCKCMTAY 185
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 1 VVSLCMVAY 9
+V CM AY
Sbjct: 177 MVCKCMTAY 185
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 1 VVSLCMVAY 9
+V CM AY
Sbjct: 177 MVCKCMTAY 185
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 1 VVSLCMVAY 9
+V CM AY
Sbjct: 177 MVCKCMTAY 185
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 1 VVSLCMVAY 9
+V CM AY
Sbjct: 177 MVCKCMTAY 185
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 1 VVSLCMVAY 9
+V CM AY
Sbjct: 177 MVCKCMTAY 185
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 VVSLCMVAY 9
+V CM AY
Sbjct: 177 MVCKCMTAY 185
54|SequenceR|275|266|GTGFIVVSLC
>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 FIVVSLC 10
F++VSLC
Sbjct: 192 FLIVSLC 198
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 FIVVSLC 10
F++VSLC
Sbjct: 196 FLIVSLC 202
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 4 FIVVSLC 10
F++VSLC
Sbjct: 196 FLIVSLC 202
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 4 FIVVSLC 10
F++VSLC
Sbjct: 196 FLIVSLC 202
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 FIVVSLC 10
F++VSLC
Sbjct: 196 FLIVSLC 202
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GFIVVSLC 10
GF VV LC
Sbjct: 414 GFKVVLLC 421
55|SequenceR|280|271|LNGIIGTGFI
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 4 IIGTGFI 10
IIGTG++
Sbjct: 646 IIGTGYV 652
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 LNGIIGTGFI 10
NG+ GTG +
Sbjct: 543 FNGLTGTGVL 552
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 LNGIIGTGFI 10
NG+ GTG +
Sbjct: 529 FNGLTGTGVL 538
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 3 GIIGTGF 9
G+IG GF
Sbjct: 221 GVIGFGF 227
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 LNGIIGTGFI 10
L+G+ GFI
Sbjct: 527 LSGVTNNGFI 536
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 4 IIGTGFI 10
I+GT FI
Sbjct: 232 IVGTAFI 238
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 4 IIGTGFI 10
I+GT FI
Sbjct: 232 IVGTAFI 238
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 4 IIGTGFI 10
I+GT FI
Sbjct: 232 IVGTAFI 238
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 4 IIGTGFI 10
I+GT FI
Sbjct: 232 IVGTAFI 238
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 4 IIGTGFI 10
I+GT FI
Sbjct: 232 IVGTAFI 238
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 NGIIGTGF 9
N +IGTG
Sbjct: 50 NDLIGTGL 57
56|SequenceR|285|276|ICMVALNGII
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 3 MVALNGII 10
MVAL GI+
Sbjct: 593 MVALTGIL 600
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 ICMVALNGII 10
IC++ L G++
Sbjct: 2255 ICIMTLMGVV 2264
>sp|YVDD_VACCC|UNCHARACTERIZED 7.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CMVALNGI 9
CM+A+NG+
Sbjct: 54 CMLAINGL 61
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ICMVALNGI 9
I ++AL+GI
Sbjct: 105 ILLIALDGI 113
57|SequenceR|290|281|YNHCVICMVA
>sp|E1A_ADE04|EARLY E1A protein|Human adenovirus E serotype 4
Query: 1 YNHCVICMVA 10
YNHCV V+
Sbjct: 183 YNHCVYSPVS 192
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 2 NHCVICM 8
N C ICM
Sbjct: 17 NTCTICM 23
>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3
Query: 3 HCVICM 8
HC +CM
Sbjct: 136 HCKMCM 141
>sp|TAT_HV192|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 HCVIC 7
HC++C
Sbjct: 33 HCLVC 37
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 NHCVICMVA 10
N C++C+ A
Sbjct: 13 NLCIVCLGA 21
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NHCVICMVA 10
N C++C+ A
Sbjct: 13 NLCIVCLGA 21
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 YNHCVI 6
Y HCV+
Sbjct: 1814 YKHCVL 1819
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 2 NHCVICMVA 10
NH +IC+ A
Sbjct: 176 NHKMICLSA 184
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 NHCVICMVA 10
NH +IC+ A
Sbjct: 176 NHKMICLSA 184
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NHCVICMVA 10
NH +IC+ A
Sbjct: 176 NHKMICLSA 184
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NHCVICMVA 10
NH +IC+ A
Sbjct: 176 NHKMICLSA 184
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 2 NHCVICMVA 10
NH +IC+ A
Sbjct: 176 NHKMICLSA 184
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 NHCVICMV 9
N C+ C V
Sbjct: 162 NKCITCFV 169
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 NHCVICMV 9
N C+ C V
Sbjct: 162 NKCITCFV 169
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 NHCVICMV 9
N C+ C V
Sbjct: 162 NKCITCFV 169
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NHCVICM 8
N C++C+
Sbjct: 13 NLCIVCL 19
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 3 HCVIC 7
HC IC
Sbjct: 1176 HCKIC 1180
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YNHCVI 6
YN CV+
Sbjct: 117 YNECVL 122
>sp|TAT_HV1S3|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 HCVICMV 9
HC +C +
Sbjct: 33 HCQVCFI 39
>sp|TAT_HV1B5|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 HCVICMV 9
HC +C +
Sbjct: 33 HCQVCFI 39
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 YNHCVI 6
Y HC++
Sbjct: 55 YEHCLV 60
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YNHCVI 6
Y HC++
Sbjct: 55 YEHCLV 60
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 YNHCVI 6
Y HC++
Sbjct: 55 YEHCLV 60
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 NHCVICM 8
+HC IC+
Sbjct: 143 SHCEICI 149
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 NHCVICM 8
+HC IC+
Sbjct: 143 SHCEICI 149
>sp|TAT_HV1S1|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 HCVICMV 9
HC +C +
Sbjct: 33 HCQVCFI 39
>sp|TAT_HV1Y2|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 HCVIC 7
HC +C
Sbjct: 33 HCQVC 37
>sp|TAT_HV1MN|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 HCVIC 7
HC +C
Sbjct: 33 HCQVC 37
>sp|TAT_HV1BR|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 HCVIC 7
HC +C
Sbjct: 33 HCQVC 37
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 1 YNHCV 5
Y+HCV
Sbjct: 308 YHHCV 312
>sp|TAT_HV2EH|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 3 HCVICMV 9
HC +C +
Sbjct: 62 HCQLCFL 68
>sp|TAT_HV1OY|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 HCVIC 7
HC +C
Sbjct: 33 HCQVC 37
>sp|VLTF3_VARV|VIRAL late gene transcription factor|Variola virus
Query: 1 YNHCVIC 7
Y +C+ C
Sbjct: 20 YEYCIFC 26
>sp|VLTF3_VAR67|VIRAL late gene transcription factor|Variola virus (isolate
Query: 1 YNHCVIC 7
Y +C+ C
Sbjct: 20 YEYCIFC 26
>sp|VLTF3_VACCC|VIRAL late gene transcription factor|Vaccinia virus (strain Copenhagen)
Query: 1 YNHCVIC 7
Y +C+ C
Sbjct: 20 YEYCIFC 26
>sp|VLTF3_VACCA|VIRAL late gene transcription factor|Vaccinia virus (strain Ankara)
Query: 1 YNHCVIC 7
Y +C+ C
Sbjct: 20 YEYCIFC 26
>sp|TAT_HV2SB|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 3 HCVICMV 9
HC +C +
Sbjct: 62 HCQLCFL 68
58|SequenceR|295|286|ISRMYYNHCV
>sp|E1A_ADE04|EARLY E1A protein|Human adenovirus E serotype 4
Query: 6 YNHCV 10
YNHCV
Sbjct: 183 YNHCV 187
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 SRMYYNHCV 10
SRM YN C+
Sbjct: 615 SRMKYNICM 623
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 SRMYYNHCV 10
SRM YN C+
Sbjct: 615 SRMKYNICM 623
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 SRMYYNHC 9
S+ Y NHC
Sbjct: 188 SKCYMNHC 195
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 RMYYNHC 9
R Y NHC
Sbjct: 190 RCYMNHC 196
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 3 RMYYN 7
RMYYN
Sbjct: 261 RMYYN 265
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 SRMYYNHC 9
+R Y NHC
Sbjct: 189 NRCYMNHC 196
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 SRMYYNH 8
+R+YYN+
Sbjct: 270 TRLYYNY 276
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 SRMYYNH 8
+R Y+NH
Sbjct: 1018 TRTYFNH 1024
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 4 MYYNH 8
+YYNH
Sbjct: 232 IYYNH 236
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 4 MYYNH 8
+YYNH
Sbjct: 232 IYYNH 236
>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)
Query: 5 YYNHCV 10
YYN C+
Sbjct: 251 YYNSCM 256
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 YYNHCV 10
YYN C+
Sbjct: 255 YYNSCM 260
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 5 YYNHCV 10
YYN C+
Sbjct: 255 YYNSCM 260
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 RMYYNHC 9
+ Y NHC
Sbjct: 191 KCYMNHC 197
>sp|PG176_MONPV|PROTEIN OPG176|Monkeypox virus (MPXV)
Query: 1 ISRMYYNHC 9
+SR+ YN C
Sbjct: 197 LSRLRYNLC 205
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 5 YYNHCV 10
YYN C+
Sbjct: 255 YYNSCM 260
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 YYNHCV 10
YYN C+
Sbjct: 255 YYNSCM 260
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 SRMYYNHC 9
++ Y NHC
Sbjct: 198 TQCYMNHC 205
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 YYNHC 9
Y NHC
Sbjct: 200 YMNHC 204
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 YYNHC 9
Y NHC
Sbjct: 195 YMNHC 199
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 3 RMYYNHCV 10
R+Y N CV
Sbjct: 631 RVYENVCV 638
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 YYNHC 9
Y NHC
Sbjct: 195 YMNHC 199
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 1 ISRMYYNH 8
+ R YY H
Sbjct: 188 LKRFYYAH 195
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ISRMYYNH 8
+ R YY H
Sbjct: 175 LKRFYYAH 182
59|SequenceR|300|291|LLSNSISRMY
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LLSNSISRMY 10
LLSNS++R+Y
Sbjct: 460 LLSNSLARLY 469
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LLSNSISRMY 10
LLSNS++R+Y
Sbjct: 460 LLSNSLARLY 469
>sp|ORF1_ZIKVK|UORF1 protein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 SNSISRMY 10
SNSI+R Y
Sbjct: 11 SNSINRFY 18
>sp|ORF1_ZIKVF|UORF1 protein|Zika virus (isolate ZIKV/Human/French
Query: 3 SNSISRMY 10
SNSI+R Y
Sbjct: 11 SNSINRFY 18
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 NSISRMY 10
NS++R+Y
Sbjct: 802 NSVARVY 808
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 LLSNSISRMY 10
L +N + R+Y
Sbjct: 1231 LCTNKVERLY 1240
60|SequenceR|305|296|FALNALLSNS
>sp|REX_HTLV2|PROTEIN Rex|Human T-cell leukemia virus 2
Query: 2 ALNALLSNS 10
AL+ALLSN+
Sbjct: 82 ALSALLSNT 90
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 ALNALLSNS 10
ALN ++SN+
Sbjct: 736 ALNQMVSNN 744
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 ALNALLSNS 10
ALN ++SN+
Sbjct: 736 ALNQMVSNN 744
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 ALNALLSNS 10
ALN ++SN+
Sbjct: 736 ALNQMVSNN 744
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 ALNALLSNS 10
ALN ++SN+
Sbjct: 736 ALNQMVSNN 744
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 ALNALLSNS 10
ALN ++SN+
Sbjct: 736 ALNQMVSNN 744
61|SequenceR|310|301|ILFDWFALNA
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 ILFDWF 6
I+FDWF
Sbjct: 447 IIFDWF 452
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 LFDWFA 7
FDWF+
Sbjct: 1142 FFDWFS 1147
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 LFDWFA 7
FDWF+
Sbjct: 1142 FFDWFS 1147
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 1 ILFDWF 6
++FDWF
Sbjct: 447 MIFDWF 452
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ILFDWFALNA 10
IL W LN+
Sbjct: 741 ILLTWLGLNS 750
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ILFDWFALNA 10
IL W LN+
Sbjct: 741 ILLTWLGLNS 750
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 ILFDWFALN 9
I+F +FALN
Sbjct: 1526 IVFKFFALN 1534
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ILFDWFALNA 10
IL W LN+
Sbjct: 740 ILLTWLGLNS 749
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ILFDWFALNA 10
IL W LN+
Sbjct: 741 ILLTWLGLNS 750
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ILFDWFALNA 10
IL W LN+
Sbjct: 741 ILLTWLGLNS 750
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 2 LFDWFAL 8
+FDW+ L
Sbjct: 633 VFDWYNL 639
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 2 LFDWFALN 9
LFDW + +
Sbjct: 116 LFDWLSTD 123
>sp|PG130_VARV|39KDA core protein OPG130|Variola virus
Query: 2 LFDWFA 7
LFDW +
Sbjct: 106 LFDWLS 111
>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 LFDWFA 7
LFDW +
Sbjct: 106 LFDWLS 111
>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LFDWFA 7
LFDW +
Sbjct: 116 LFDWLS 121
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 ILFDWF 6
I++DWF
Sbjct: 443 IIYDWF 448
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 ILFDWFAL 8
IL+D+F+L
Sbjct: 1678 ILWDYFSL 1685
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 ILFDWFAL 8
IL+D+F+L
Sbjct: 1677 ILWDYFSL 1684
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 ILFDWFAL 8
IL+D+F+L
Sbjct: 1668 ILWDYFSL 1675
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 ILFDWF 6
I++DWF
Sbjct: 443 IIYDWF 448
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 ILFDWF 6
I++DWF
Sbjct: 443 IIYDWF 448
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 3 FDWFALN 9
FD+FAL+
Sbjct: 207 FDFFALS 213
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 ILFDWFALNA 10
+L W LN+
Sbjct: 739 VLLTWIGLNS 748
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 ILFDWFALNA 10
+L W LN+
Sbjct: 739 VLLTWIGLNS 748
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 ILFDWFALNA 10
+L W LN+
Sbjct: 739 VLLTWIGLNS 748
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 ILFDWFALNA 10
+L W LN+
Sbjct: 739 VLLTWIGLNS 748
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 ILFDWFALNA 10
+L W LN+
Sbjct: 739 VLLTWIGLNS 748
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 LFDWFA 7
LFD+FA
Sbjct: 35 LFDFFA 40
>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9
Query: 3 FDWFALN 9
F W ALN
Sbjct: 196 FGWSALN 202
>sp|VE6_HPV63|PROTEIN E6|Human papillomavirus type 63
Query: 1 ILFDWFALN 9
+LFD+F L+
Sbjct: 40 LLFDYFDLH 48
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ILFDWFALNA 10
+++ W+ LNA
Sbjct: 256 VVYCWWLLNA 265
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ILFDWFALNA 10
+++ W+ LNA
Sbjct: 256 VVYCWWLLNA 265
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 FDWFALN 9
F W A+N
Sbjct: 1130 FHWHAIN 1136
62|SequenceR|315|306|LCFFIILFDW
>sp|PG147_VACCC|VIRION membrane protein OPG147|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LCFFIILFD 9
LC+FI++F+
Sbjct: 8 LCYFILIFN 16
>sp|A21_VACCA|VIRION membrane protein A21|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LCFFIILFD 9
LC+FI++F+
Sbjct: 8 LCYFILIFN 16
>sp|PG147_VARV|VIRION membrane protein OPG147|Variola virus
Query: 1 LCFFIILFD 9
LC+FI++F+
Sbjct: 8 LCYFILIFN 16
>sp|PG147_VAR67|VIRION membrane protein OPG147|Variola virus (isolate
Query: 1 LCFFIILFD 9
LC+FI++F+
Sbjct: 8 LCYFILIFN 16
>sp|PG147_MONPV|VIRION membrane protein OPG147|Monkeypox virus (MPXV)
Query: 1 LCFFIILFD 9
LC+FI++F+
Sbjct: 8 LCYFILIFN 16
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 LCFFIILFDW 10
L F++LF W
Sbjct: 539 LAAFVLLFPW 548
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FFIILFDW 10
F++LF W
Sbjct: 2148 LFVLLFGW 2155
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 LCFFIIL 7
LC FII+
Sbjct: 214 LCIFIIM 220
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FFIILFDW 10
F++LF W
Sbjct: 2148 LFVLLFGW 2155
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 FIILFDW 10
F+I F W
Sbjct: 1933 FVIFFTW 1939
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 2 CFFIILF 8
CF+I++F
Sbjct: 306 CFYIVIF 312
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CFFIILF 8
CF+I++F
Sbjct: 306 CFYIVIF 312
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 FIILFDW 10
F+I F W
Sbjct: 1933 FVIFFTW 1939
>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)
Query: 1 LCFFIILFDW 10
L FF+ ++ W
Sbjct: 196 LTFFVEVYSW 205
>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LCFFIILFDW 10
L FF+ ++ W
Sbjct: 196 LTFFVEVYSW 205
>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LCFFIILFDW 10
L FF+ ++ W
Sbjct: 196 LTFFVEVYSW 205
>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 LCFFIILFDW 10
L FF+ ++ W
Sbjct: 196 LTFFVEVYSW 205
>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LCFFIILFDW 10
L FF+ ++ W
Sbjct: 196 LTFFVEVYSW 205
63|SequenceR|320|311|FIVLPLCFFI
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 FIVLPLCF 8
+++LP+CF
Sbjct: 1414 YVLLPICF 1421
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 FIVLPLCF 8
+++LP+CF
Sbjct: 1414 YVLLPICF 1421
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 1 FIVLPLCF 8
+V PLCF
Sbjct: 11 LLVFPLCF 18
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 1 FIVLPLCF 8
+V PLCF
Sbjct: 11 LLVFPLCF 18
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 1 FIVLPLCF 8
+V PLCF
Sbjct: 11 LLVFPLCF 18
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 1 FIVLPLCF 8
+V PLCF
Sbjct: 11 LLVFPLCF 18
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 FIVLPLCF 8
+V PLCF
Sbjct: 11 LLVFPLCF 18
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 1 FIVLPLCF 8
+V PLCF
Sbjct: 11 LLVFPLCF 18
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 2 IVLPLCFFI 10
++LP C F+
Sbjct: 285 VILPACAFV 293
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 2 IVLPLCFFI 10
++LP C F+
Sbjct: 285 VILPACAFV 293
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 4 LPLCFFI 10
PLCF +
Sbjct: 205 FPLCFLV 211
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 4 LPLCFFI 10
PLCF +
Sbjct: 205 FPLCFLV 211
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 LPLCFF 9
+P+CFF
Sbjct: 82 MPVCFF 87
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 4 LPLCFF 9
+P+CFF
Sbjct: 82 MPVCFF 87
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 4 LPLCFF 9
+P+CFF
Sbjct: 82 MPVCFF 87
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 3 VLPLCF 8
+LP CF
Sbjct: 618 LLPFCF 623
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 3 VLPLCF 8
+LP CF
Sbjct: 618 LLPFCF 623
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 VLPLCF 8
+LP CF
Sbjct: 618 LLPFCF 623
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 VLPLCF 8
+LP CF
Sbjct: 618 LLPFCF 623
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 4 LPLCF 8
+PLCF
Sbjct: 440 VPLCF 444
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 FIVLPLCFFI 10
F+V+ C FI
Sbjct: 370 FVVILTCRFI 379
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 FIVLPLCFFI 10
F+V+ C FI
Sbjct: 369 FVVILTCRFI 378
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 FIVLPLCFFI 10
F+V+ C FI
Sbjct: 369 FVVILTCRFI 378
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 FIVLPLCFFI 10
F+V+ C FI
Sbjct: 370 FVVILTCRFI 379
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 FIVLPLCFFI 10
F+V+ C FI
Sbjct: 369 FVVILTCRFI 378
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 FIVLPLCFFI 10
F+V+ C FI
Sbjct: 369 FVVILTCRFI 378
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 3 VLPLCFF 9
++PLC F
Sbjct: 201 IVPLCIF 207
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 FIVLPLCFFI 10
F + P CF++
Sbjct: 651 FNMRPSCFYL 660
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 FIVLPLC 7
F+V P+C
Sbjct: 1187 FVVKPVC 1193
64|SequenceR|325|316|KTLEHFIVLP
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 TLEHFIVL 9
T+EHF+ L
Sbjct: 18 TMEHFLPL 25
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 TLEHFIVL 9
T+EHF+ L
Sbjct: 18 TMEHFLPL 25
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 3 LEHFIVLP 10
L H+ VLP
Sbjct: 232 LSHYYVLP 239
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 KTLEHFIVL 9
K EH+IVL
Sbjct: 1805 KREEHYIVL 1813
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 KTLEHFIVL 9
K EH+IVL
Sbjct: 1806 KREEHYIVL 1814
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LEHFIVLP 10
L H+ V+P
Sbjct: 246 LSHYYVMP 253
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 3 LEHFIVLP 10
L H+ V+P
Sbjct: 232 LSHYYVMP 239
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 3 LEHFIVLP 10
L H+ V+P
Sbjct: 232 LSHYYVMP 239
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 4 EHFIVLP 10
E+F VLP
Sbjct: 953 EYFYVLP 959
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 1 KTLEHFIVLP 10
+ L H ++LP
Sbjct: 168 RALAHLVMLP 177
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 4 EHFIVL 9
EHFI++
Sbjct: 9 EHFIIM 14
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 EHFIVL 9
EHFI++
Sbjct: 9 EHFIIM 14
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 1 KTLEHFIVLP 10
+ L H ++LP
Sbjct: 177 RALAHLVMLP 186
65|SequenceR|330|321|ELLWKKTLEH
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 ELLWKKTLE 9
ELLWK TL+
Sbjct: 3658 ELLWKFTLD 3666
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 4 WKKTLEH 10
W+K +EH
Sbjct: 353 WRKVVEH 359
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 4 WKKTLEH 10
W+ LEH
Sbjct: 84 WRPLLEH 90
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WKKTLEH 10
W+KTLE
Sbjct: 342 WEKTLEQ 348
>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 4 WKKTLE 9
WKKT+E
Sbjct: 133 WKKTIE 138
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WKKTLEH 10
W KTLE
Sbjct: 338 WNKTLEQ 344
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 12 EILTKTTVDH 21
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WKKTLEH 10
W KTLE
Sbjct: 344 WNKTLEQ 350
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELLWK 5
ELLWK
Sbjct: 1409 ELLWK 1413
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELLWK 5
ELLWK
Sbjct: 1410 ELLWK 1414
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 17 EILTKTTVDH 26
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 10 EILTKTTVDH 19
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 11 EILTKTTVDH 20
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELLWK 5
ELLWK
Sbjct: 1410 ELLWK 1414
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELLWK 5
ELLWK
Sbjct: 1409 ELLWK 1413
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELLWK 5
ELLWK
Sbjct: 1410 ELLWK 1414
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELLWK 5
ELLWK
Sbjct: 1411 ELLWK 1415
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 WKKTL 8
WKKT+
Sbjct: 692 WKKTV 696
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 WKKTL 8
WKKT+
Sbjct: 691 WKKTV 695
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELLWK 5
ELLWK
Sbjct: 1409 ELLWK 1413
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELLWK 5
ELLWK
Sbjct: 1409 ELLWK 1413
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 4 WKKTLE 9
W+KT+E
Sbjct: 133 WRKTIE 138
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELLWK 5
ELLWK
Sbjct: 1408 ELLWK 1412
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELLWK 5
ELLWK
Sbjct: 1411 ELLWK 1415
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELLWK 5
ELLWK
Sbjct: 1410 ELLWK 1414
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 1 ELLWKKTLEH 10
E+L K T++H
Sbjct: 18 EILTKTTVDH 27
66|SequenceR|335|326|KCSFDELLWK
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 CSFDELLW 9
C F +L+W
Sbjct: 128 CGFADLMW 135
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 3 SFDELLWK 10
FDELL+K
Sbjct: 303 GFDELLYK 310
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 SFDELLWK 10
FDELL+K
Sbjct: 626 GFDELLYK 633
>sp|BEL3_FOAMV|PROTEIN Bel-3|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 CSFDELLWK 10
CSF E LW+
Sbjct: 34 CSFIEPLWQ 42
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 CSFDELLWK 10
CS D + W+
Sbjct: 207 CSNDSITWQ 215
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 FDELLWK 10
DE+LW+
Sbjct: 1814 LDEVLWE 1820
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 FDELLWK 10
DE+LW+
Sbjct: 1814 LDEVLWE 1820
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 CSFDELLW 9
C D+L+W
Sbjct: 2226 CYGDDLIW 2233
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 CSFDELLW 9
C D+L+W
Sbjct: 2222 CYGDDLIW 2229
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 FDELLWK 10
DE+LW+
Sbjct: 1817 LDEVLWE 1823
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 FDELLWK 10
DE+LW+
Sbjct: 1817 LDEVLWE 1823
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 CSFDELLWK 10
CS D + W+
Sbjct: 207 CSNDSITWQ 215
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CSFDE 6
CSFD+
Sbjct: 598 CSFDD 602
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CSFDE 6
CSFD+
Sbjct: 598 CSFDD 602
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CSFDE 6
CSFD+
Sbjct: 598 CSFDD 602
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 3 SFDELLWK 10
F+ELL+K
Sbjct: 239 GFEELLYK 246
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 KCSFDELLW 9
+C F++ +W
Sbjct: 912 ECPFNKRVW 920
67|SequenceR|340|331|IYPVIKCSFD
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 YPVIKCSFD 10
YP IK S+D
Sbjct: 165 YPTIKRSYD 173
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 IYPVIKCSFD 10
+YP ++C F+
Sbjct: 1083 LYPELECFFE 1092
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 IYPVIKCSFD 10
+YP ++C F+
Sbjct: 1083 LYPELECFFE 1092
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 IYPVIKCSF 9
+YP +KC+
Sbjct: 156 VYPRMKCNL 164
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 2 YPVIKCSFD 10
+PVI+C D
Sbjct: 860 WPVIQCEND 868
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 2 YPVIKCSFD 10
YP I CS D
Sbjct: 117 YPDIFCSAD 125
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 2 YPVIKCSFD 10
YP I CS D
Sbjct: 117 YPDIFCSAD 125
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 IYPVIKCSFD 10
+YP + C F+
Sbjct: 1083 LYPELDCFFE 1092
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 2 YPVIKCSFD 10
+P+I+C D
Sbjct: 860 WPIIQCEND 868
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 3 PVIKCSF 9
P+++C F
Sbjct: 34 PIVQCLF 40
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 3 PVIKCSF 9
P+++C F
Sbjct: 34 PIVQCLF 40
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 2 YPVIKCSFD 10
+PV++C D
Sbjct: 860 WPVMQCEND 868
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 IYPVIKCSFD 10
++P ++C F+
Sbjct: 1084 LFPELECFFE 1093
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 IYPVIKCSFD 10
++P ++C F+
Sbjct: 1084 LFPELECFFE 1093
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 IYPVIKCSFD 10
++P ++C F+
Sbjct: 1084 LFPELECFFE 1093
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 IYPVIKCSF 9
++PV +C +
Sbjct: 147 VHPVNRCEY 155
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 PVIKC 7
PV+KC
Sbjct: 859 PVVKC 863
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 IYPVIKCSF 9
I+P + CS+
Sbjct: 2023 IHPDVVCSY 2031
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 3 PVIKC 7
PV+KC
Sbjct: 856 PVVKC 860
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 PVIKC 7
PV+KC
Sbjct: 859 PVVKC 863
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 YPVIKCSFD 10
+P++ C+ +
Sbjct: 1475 HPIVSCAIE 1483
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 YPVIKCSFD 10
+P++ C+ +
Sbjct: 1475 HPIVSCAIE 1483
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 PVIKC 7
PV+KC
Sbjct: 857 PVVKC 861
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 PVIKC 7
PV+KC
Sbjct: 859 PVVKC 863
68|SequenceR|345|336|LSAVEIYPVI
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 3 AVEIYP 8
AVE+YP
Sbjct: 31 AVEVYP 36
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 3 AVEIYP 8
AVE+YP
Sbjct: 31 AVEVYP 36
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 4 VEIYPV 9
VEIYP+
Sbjct: 89 VEIYPI 94
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 4 VEIYPV 9
VEIYP+
Sbjct: 89 VEIYPI 94
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 4 VEIYPV 9
VEIYP+
Sbjct: 90 VEIYPI 95
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 4 VEIYPV 9
VEIYP+
Sbjct: 89 VEIYPI 94
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 4 VEIYPV 9
VEIYP+
Sbjct: 89 VEIYPI 94
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 4 VEIYPV 9
VEIYP+
Sbjct: 90 VEIYPI 95
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 AVEIYPVI 10
AVE+ P++
Sbjct: 336 AVELVPIV 343
69|SequenceR|350|341|FTTVGLSAVE
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FTTVGLSAVE 10
F VGL AVE
Sbjct: 178 FARVGLRAVE 187
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FTTVGLSAVE 10
F VGL AVE
Sbjct: 178 FARVGLRAVE 187
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 1 FTTVGLSAVE 10
+TTVG+ A E
Sbjct: 449 YTTVGVGAGE 458
>sp|RL8A_HCMVM|PROTEIN RL8A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TTVGLSAV 9
+VGLSAV
Sbjct: 81 NSVGLSAV 88
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FTTVGL 6
FTT+GL
Sbjct: 129 FTTLGL 134
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FTTVGL 6
FTT+GL
Sbjct: 129 FTTLGL 134
70|SequenceR|355|346|LACLTFTTVG
>sp|CAP9_ADE41|HEXON-INTERLACING protein IX|Human adenovirus F serotype 41
Query: 2 ACLTFTTVG 10
A LT+ TVG
Sbjct: 51 ATLTYATVG 59
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 ACLTFTTVG 10
ACL T+G
Sbjct: 1461 ACLAVVTIG 1469
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 1 LACLTF 6
LAC+TF
Sbjct: 529 LACVTF 534
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 ACLTF 6
ACLTF
Sbjct: 1216 ACLTF 1220
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 ACLTF 6
ACLTF
Sbjct: 1216 ACLTF 1220
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 ACLTFTT 8
AC+ FTT
Sbjct: 640 ACVYFTT 646
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 ACLTFTTVG 10
ACL FT G
Sbjct: 603 ACLHFTAPG 611
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 5 TFTTVG 10
TFTTVG
Sbjct: 358 TFTTVG 363
>sp|PG040_VAR67|SUPERINFECTION exclusion protein|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LACLTFT 7
LAC FT
Sbjct: 9 LACTAFT 15
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LACLTFTTVG 10
+A L+FTT G
Sbjct: 135 VALLSFTTAG 144
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LACLTFTTVG 10
+A L+FTT G
Sbjct: 135 VALLSFTTAG 144
>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1
Query: 1 LACLTF 6
++CLTF
Sbjct: 105 ISCLTF 110
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 1 LACLTF 6
++CLTF
Sbjct: 105 ISCLTF 110
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 1 LACLTF 6
++CLTF
Sbjct: 105 ISCLTF 110
>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2
Query: 1 LACLTF 6
++CLTF
Sbjct: 105 ISCLTF 110
71|SequenceR|360|351|FRDICLACLT
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 RDICLAC 8
R +CLAC
Sbjct: 256 RQLCLAC 262
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RDICLACL 9
RDIC+A L
Sbjct: 558 RDICVARL 565
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RDICLACL 9
RDIC+A L
Sbjct: 558 RDICVARL 565
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 1 FRDICLAC 8
FRD+ AC
Sbjct: 429 FRDMSYAC 436
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 1 FRDICLAC 8
FRD+ AC
Sbjct: 429 FRDMSYAC 436
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ICLACL 9
IC+AC+
Sbjct: 374 ICIACI 379
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 CLACLT 10
C+ CLT
Sbjct: 1119 CMGCLT 1124
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 DICLACL 9
D+C CL
Sbjct: 1535 DVCAVCL 1541
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 FRDICLACLT 10
F D +AC+T
Sbjct: 549 FADTVVACVT 558
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 FRDICLACLT 10
F D +AC+T
Sbjct: 549 FADTVVACVT 558
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 2 RDICLACL 9
RD+CL L
Sbjct: 2 RDVCLPFL 9
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CLACLT 10
CL C+T
Sbjct: 84 CLGCVT 89
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CLACLT 10
CL C+T
Sbjct: 84 CLGCVT 89
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ICLACL 9
+C+AC+
Sbjct: 376 VCMACI 381
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 RDICLACLT 10
++ICL C T
Sbjct: 236 KNICLFCST 244
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FRDICLAC 8
R +CL C
Sbjct: 760 LRSLCLFC 767
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 FRDICLACLT 10
F D C C T
Sbjct: 623 FDDFCPECRT 632
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 FRDICLACLT 10
F D C C T
Sbjct: 623 FDDFCPECRT 632
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 RDICLAC 8
R +CL C
Sbjct: 256 RQLCLVC 262
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 4 ICLACLT 10
+C+ CLT
Sbjct: 50 VCMRCLT 56
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 ICLACLT 10
+C+ CLT
Sbjct: 48 VCMRCLT 54
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 4 ICLAC 8
+CLAC
Sbjct: 248 LCLAC 252
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 DICLACL 9
++C+ CL
Sbjct: 13 NLCIVCL 19
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DICLACL 9
++C+ CL
Sbjct: 13 NLCIVCL 19
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DICLACL 9
++C+ CL
Sbjct: 13 NLCIVCL 19
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 2 RDICL 6
RD+CL
Sbjct: 101 RDVCL 105
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 2 RDICL 6
RD+CL
Sbjct: 101 RDVCL 105
72|SequenceR|365|356|NTAARFRDIC
>sp|NEP_I97A1|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I97A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I85A3|NUCLEAR export protein|Influenza A virus (strain
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I83A8|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I83A1|NUCLEAR export protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I80AA|NUCLEAR export protein|Influenza A virus (strain A/India/6263/1980
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I80A4|NUCLEAR export protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I80A2|NUCLEAR export protein|Influenza A virus (strain
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I78A8|NUCLEAR export protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I78A7|NUCLEAR export protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I78A4|NUCLEAR export protein|Influenza A virus (strain A/Mallard/New
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I78A3|NUCLEAR export protein|Influenza A virus (strain A/Mallard/New
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I77AB|NUCLEAR export protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I77AA|NUCLEAR export protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I77A9|NUCLEAR export protein|Influenza A virus (strain A/Equine/New
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I77A4|NUCLEAR export protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I77A0|NUCLEAR export protein|Influenza A virus (strain A/Alaska/6/1977
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I76A6|NUCLEAR export protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I75A0|NUCLEAR export protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I73A5|NUCLEAR export protein|Influenza A virus (strain A/Port
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I73A4|NUCLEAR export protein|Influenza A virus (strain
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 1 NTVSSFQDI 9
>sp|NEP_I72A4|NUCLEAR export protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I72A3|NUCLEAR export protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I72A2|NUCLEAR export protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I71A1|NUCLEAR export protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I70A0|NUCLEAR export protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I69A0|NUCLEAR export protein|Influenza A virus (strain A/England/878/1969
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I68A5|NUCLEAR export protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I68A4|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I68A0|NUCLEAR export protein|Influenza A virus (strain A/Aichi/2/1968
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I67A2|NUCLEAR export protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I67A0|NUCLEAR export protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I61A1|NUCLEAR export protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I60A0|NUCLEAR export protein|Influenza A virus (strain A/Ann
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I59A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I57A5|NUCLEAR export protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I57A3|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I57A2|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I57A1|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I57A0|NUCLEAR export protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I56A3|NUCLEAR export protein|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I54A2|NUCLEAR export protein|Influenza A virus (strain
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I54A0|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/1/1954
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I51A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I50A0|NUCLEAR export protein|Influenza A virus (strain A/Fort
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I47A0|NUCLEAR export protein|Influenza A virus (strain A/Fort
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I45A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I43A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I40A0|NUCLEAR export protein|Influenza A virus (strain A/Hickox/1940
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I36A0|NUCLEAR export protein|Influenza A virus (strain A/Henry/1936
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I35A3|NUCLEAR export protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I34A1|NUCLEAR export protein|Influenza A virus (strain A/Puerto
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I33A0|NUCLEAR export protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I24A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Japan/1924
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 1 NTVSSFQDI 9
>sp|NEP_I18A0|NUCLEAR export protein|Influenza A virus (strain A/Brevig
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I06A0|NUCLEAR export protein|Influenza A virus (strain
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I03A1|NUCLEAR export protein|Influenza A virus (strain
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I03A0|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I02A6|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I02A5|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I02A4|NUCLEAR export protein|Influenza A virus (strain A/Silky
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I02A3|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I02A2|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I02A1|NUCLEAR export protein|Influenza A virus (strain A/Guinea
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I02A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I01A3|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I01A2|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I01A1|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I01A0|NUCLEAR export protein|Influenza A virus (strain A/Silky
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I00A0|NUCLEAR export protein|Influenza A virus (strain A/Duck/Hong
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NEP_I000X|NUCLEAR export protein|Influenza A virus (strain A/X-31
Query: 1 NTAARFRDI 9
NT + F+DI
Sbjct: 4 NTVSSFQDI 12
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 3 AARFRDIC 10
+A+F D+C
Sbjct: 365 SAKFIDVC 372
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 AARFRDIC 10
+A+F D+C
Sbjct: 365 SAKFIDVC 372
73|SequenceR|370|361|YYMQVNTAAR
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 YYMQVNTAAR 10
+Y+ NTA R
Sbjct: 587 WYLVTNTAIR 596
74|SequenceR|375|366|NEIMEYYMQV
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 2 EIMEYYMQ 9
+IMEYY Q
Sbjct: 109 QIMEYYQQ 116
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NEIMEYYMQV 10
+++ME Y Q+
Sbjct: 12 DDVMEVYQQI 21
>sp|GLRX1_CWPXB|GLUTAREDOXIN-1 virus (strain Brighton Red)
Query: 1 NEIMEYYMQV 10
NE+ +Y+ Q+
Sbjct: 55 NELRDYFEQI 64
>sp|GLRX1_CWPXG|GLUTAREDOXIN-1 virus (strain GRI-90 /
Query: 1 NEIMEYYMQV 10
NE+ +Y+ Q+
Sbjct: 55 NELRDYFEQI 64
>sp|GLRX1_MONPV|GLUTAREDOXIN-1 virus (MPXV)
Query: 1 NEIMEYYMQV 10
NE+ +Y+ Q+
Sbjct: 55 NELRDYFEQI 64
>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)
Query: 1 NEIMEYYMQV 10
NE+ +Y+ Q+
Sbjct: 55 NELRDYFEQI 64
>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)
Query: 1 NEIMEYYMQV 10
NE+ +Y+ Q+
Sbjct: 55 NELRDYFEQI 64
>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)
Query: 1 NEIMEYYMQV 10
NE+ +Y+ Q+
Sbjct: 55 NELRDYFEQI 64
>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)
Query: 1 NEIMEYYMQV 10
NE+ +Y+ Q+
Sbjct: 55 NELRDYFEQI 64
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 1 NEIMEYYMQ 9
++I+EYY Q
Sbjct: 18 DKILEYYEQ 26
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 503 NQLMEALMQL 512
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 511 NQLMEALMQL 520
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 2 EIMEYYMQ 9
+I EYY Q
Sbjct: 109 QIKEYYQQ 116
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 514 NQLMEALMQL 523
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 514 NQLMEALMQL 523
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 520 NQLMEALMQL 529
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 516 NQLMEALMQL 525
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 504 NQLMEALMQL 513
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 514 NQLMEALMQL 523
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 514 NQLMEALMQL 523
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 514 NQLMEALMQL 523
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 503 NQLMEALMQL 512
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 503 NQLMEALMQL 512
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 504 NQLMEALMQL 513
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 1 NEIMEYYMQV 10
N++ME MQ+
Sbjct: 504 NQLMEALMQL 513
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 2 EIMEYYMQ 9
I+EY+M+
Sbjct: 68 HILEYFMK 75
75|SequenceR|380|371|TTSSCNEIME
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 2 TSSCNEI 8
TSSCN I
Sbjct: 334 TSSCNGI 340
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 TTSSCNEIME 10
T C +IME
Sbjct: 53 TGEGCQQIME 62
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 TTSSCNEIME 10
T C +IME
Sbjct: 53 TGEGCQQIME 62
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 5 CNEIME 10
CNEI++
Sbjct: 321 CNEILD 326
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 5 CNEIME 10
CNEI++
Sbjct: 321 CNEILD 326
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 5 CNEIME 10
CNEI++
Sbjct: 321 CNEILD 326
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 1 TTSSCNEIME 10
+ +S NEIM+
Sbjct: 214 SATSANEIMD 223
76|SequenceR|385|376|VALKATTSSC
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 VALKATTSSC 10
+ALK+T SC
Sbjct: 216 LALKSTNYSC 225
77|SequenceR|390|381|AGVWIVALKA
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 VWIVALKA 10
VW VALK
Sbjct: 355 VWAVALKG 362
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 AGVWI 5
AG+W+
Sbjct: 2113 AGIWV 2117
78|SequenceR|395|386|LALLLAGVWI
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LALLLAGVW 9
+AL +AG+W
Sbjct: 299 IALSVAGIW 307
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 LALLLAGVWI 10
L L LAG W+
Sbjct: 1482 LPLTLAGYWM 1491
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 5 LAGVWI 10
LAG WI
Sbjct: 587 LAGAWI 592
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 LALLLAGVW 9
LALL GV+
Sbjct: 7 LALLFIGVY 15
>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LLLAGVW 9
LLL VW
Sbjct: 13 LLLCAVW 19
>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LLLAGVW 9
LLL VW
Sbjct: 13 LLLCAVW 19
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 LALLLAGVWI 10
L+ LAG WI
Sbjct: 1492 LSTNLAGHWI 1501
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 LALLLAGVWI 10
L+ LAG WI
Sbjct: 1492 LSTNLAGHWI 1501
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 LALLLAGVWI 10
L+ LAG WI
Sbjct: 1492 LSTNLAGHWI 1501
79|SequenceR|400|391|LVVEPLALLL
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 VVEPLALLL 10
++EPLAL L
Sbjct: 290 LLEPLALSL 298
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1229 IEPVCLLL 1236
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1228 IEPVCLLL 1235
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1230 IEPVCLLL 1237
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1228 IEPVCLLL 1235
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1238 IEPVCLLL 1245
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1226 IEPVCLLL 1233
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1231 IEPVCLLL 1238
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1219 IEPVCLLL 1226
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1219 IEPVCLLL 1226
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1220 IEPVCLLL 1227
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1218 IEPVCLLL 1225
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1218 IEPVCLLL 1225
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1220 IEPVCLLL 1227
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1220 IEPVCLLL 1227
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1222 IEPVCLLL 1229
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1217 IEPVCLLL 1224
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 VEPLALLL 10
+EP+ LLL
Sbjct: 1236 IEPVCLLL 1243
80|SequenceR|405|396|KSLQRLVVEP
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LQRLVVEP 10
LQR+ +EP
Sbjct: 6445 LQRMCLEP 6452
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 SLQRLVVEP 10
+++R+V+EP
Sbjct: 1668 NIRRMVIEP 1676
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 KSLQRLVVE 9
+ L+RL+VE
Sbjct: 1287 RCLERLIVE 1295
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 KSLQRLVVE 9
+ L+RL+VE
Sbjct: 1287 RCLERLIVE 1295
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SLQRLVVEP 10
S +RLV EP
Sbjct: 1026 SPRRLVTEP 1034
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SLQRLVVEP 10
S +RLV EP
Sbjct: 1026 SPRRLVTEP 1034
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 SLQRLVVEP 10
S +RLV EP
Sbjct: 1026 SPRRLVTEP 1034
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 2 SLQRLVVEP 10
S+QR +EP
Sbjct: 580 SIQRSALEP 588
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 2 SLQRLVVEP 10
S+QR +EP
Sbjct: 580 SIQRSALEP 588
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 2 SLQRLVVEP 10
S+QR +EP
Sbjct: 580 SIQRSALEP 588
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 2 SLQRLVVEP 10
S+QR +EP
Sbjct: 580 SIQRSALEP 588
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 2 SLQRLVVEP 10
S+QR +EP
Sbjct: 580 SIQRSALEP 588
81|SequenceR|410|401|FGLDEKSLQR
>sp|11K_PAVHV|HOST-MODULATION protein 11K|Human parvovirus B19 (strain HV)
Query: 2 GLDEKSLQ 9
G+D KSL+
Sbjct: 7 GMDTKSLK 14
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FGLDEKS 7
GLD+KS
Sbjct: 177 LGLDDKS 183
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FGLDEKS 7
GLD+KS
Sbjct: 177 LGLDDKS 183
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FGLDEKS 7
GLD+KS
Sbjct: 177 LGLDDKS 183
82|SequenceR|415|406|PARGSFGLDE
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 1 PARGSFGLDE 10
P+R SF +DE
Sbjct: 237 PSRYSFEIDE 246
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 1 PARGSFGLDE 10
P R SF +DE
Sbjct: 230 PTRYSFEIDE 239
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 2 ARGSFGLDE 10
ARG GLDE
Sbjct: 404 ARGLCGLDE 412
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 2 ARGSFGLDE 10
ARG GLDE
Sbjct: 403 ARGLCGLDE 411
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 1 PARGSFGLDE 10
P+R SF +DE
Sbjct: 231 PSRYSFEIDE 240
>sp|VL2_HPV17|MINOR capsid protein L2|Human papillomavirus 17
Query: 1 PARGSFGLDE 10
P+R SF L+E
Sbjct: 238 PSRYSFELEE 247
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 3 RGSFGL 8
RG FGL
Sbjct: 496 RGEFGL 501
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 2 ARGSFGLD 9
ARG+ GLD
Sbjct: 427 ARGASGLD 434
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 2 ARGSFGLDE 10
ARG GLD+
Sbjct: 404 ARGLCGLDD 412
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 PARGSF 6
P RGSF
Sbjct: 709 PGRGSF 714
83|SequenceR|420|411|ICREAPARGS
>sp|BILF1_EBVB9|G-PROTEIN coupled receptor BILF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ICREAPARG 9
+CRE P +G
Sbjct: 173 MCREGPTKG 181
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 2 CREAPARGS 10
C APA+GS
Sbjct: 178 CDPAPAKGS 186
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 2 CREAPARG 9
CR PA+G
Sbjct: 203 CRNPPAQG 210
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 ICREAPAR 8
+CR+ P R
Sbjct: 1442 LCRDGPIR 1449
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 ICREAPAR 8
+CR+ P R
Sbjct: 1442 LCRDGPIR 1449
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 ICREAPARGS 10
I +E P RGS
Sbjct: 262 IIKEEPLRGS 271
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 CREAPARG 9
C+ PA G
Sbjct: 139 CKRGPANG 146
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 1 ICREAPARGS 10
+ +AP RG+
Sbjct: 2 VAEDAPVRGT 11
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 ICREAPARGS 10
+ +AP RG+
Sbjct: 2 VAEDAPVRGT 11
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 REAPARG 9
R+AP RG
Sbjct: 499 RDAPQRG 505
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 ICREAPARGS 10
+ +AP RG+
Sbjct: 2 VAEDAPVRGT 11
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 CREAPARG 9
C+ PA G
Sbjct: 139 CKRGPASG 146
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 CREAPARG 9
C+ PA G
Sbjct: 139 CKRGPASG 146
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 EAPARGS 10
+AP RGS
Sbjct: 365 KAPGRGS 371
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 3 REAPARGS 10
REAP RG+
Sbjct: 141 REAPLRGA 148
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 2 CREAPARGS 10
CR AP R +
Sbjct: 142 CRAAPKRAT 150
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 EAPARGS 10
EAP +GS
Sbjct: 2831 EAPTQGS 2837
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 EAPARGS 10
EAP +GS
Sbjct: 2831 EAPTQGS 2837
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 EAPARGS 10
EAP +GS
Sbjct: 2827 EAPTQGS 2833
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 ICREAPARGS 10
I +E P +GS
Sbjct: 260 IIKEEPLKGS 269
>sp|E1A_ADE40|EARLY E1A protein|Human adenovirus F serotype 40
Query: 2 CREAPARG 9
C E P RG
Sbjct: 137 CPENPGRG 144
>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41
Query: 2 CREAPARG 9
C E P RG
Sbjct: 142 CPENPGRG 149
84|SequenceR|425|416|PSIKIICREA
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 PSIKIICRE 9
PS++ ICR+
Sbjct: 262 PSVRCICRD 270
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 4 KIICREA 10
K+ICRE+
Sbjct: 1306 KVICRES 1312
>sp|UL79_HHV6U|PROTEIN U52|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PSIKIICR 8
P++++IC+
Sbjct: 179 PTVRLICK 186
>sp|UL79_HHV6Z|PROTEIN U52|Human herpesvirus 6B (strain Z29)
Query: 1 PSIKIICR 8
P++++IC+
Sbjct: 179 PAVRLICK 186
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 PSIKIICRE 9
P+++ ICR+
Sbjct: 285 PNVRCICRD 293
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PSIKIICRE 9
P KI+C+E
Sbjct: 307 PVAKILCKE 315
>sp|PG067_VARV|PROTEIN OPG067|Variola virus
Query: 1 PSIKIICRE 9
P KI+C+E
Sbjct: 307 PVAKILCKE 315
>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PSIKIICRE 9
P KI+C+E
Sbjct: 307 PVAKILCKE 315
>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)
Query: 1 PSIKIICRE 9
P KI+C+E
Sbjct: 307 PVAKILCKE 315
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 4 KIICREA 10
K+ICR++
Sbjct: 1305 KVICRDS 1311
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 4 KIICREA 10
K+ICR++
Sbjct: 1326 KVICRDS 1332
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 4 KIICREA 10
K+ICR++
Sbjct: 1307 KVICRDS 1313
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PSIKIICRE 9
P++KI C E
Sbjct: 782 PNVKISCLE 790
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 PSIKIICRE 9
P++KI C E
Sbjct: 782 PNVKISCLE 790
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 PSIKIICRE 9
P++KI C E
Sbjct: 781 PNLKISCLE 789
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 1 PSIKII 6
PSIKI+
Sbjct: 364 PSIKIV 369
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 SIKIICR 8
+IK++CR
Sbjct: 2026 AIKVLCR 2032
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 4 KIICRE 9
KIIC E
Sbjct: 1315 KIICNE 1320
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 SIKIICR 8
+IK++CR
Sbjct: 2026 AIKVLCR 2032
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 SIKIICR 8
+IK++CR
Sbjct: 2026 AIKVLCR 2032
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 SIKIICR 8
+IK++CR
Sbjct: 2026 AIKVLCR 2032
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 SIKIICR 8
+IK++CR
Sbjct: 2026 AIKVLCR 2032
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 SIKIICR 8
+IK++CR
Sbjct: 2026 AIKVLCR 2032
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 SIKIICR 8
+IK++CR
Sbjct: 2026 AIKVLCR 2032
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 SIKIICR 8
+IK++CR
Sbjct: 2026 AIKVLCR 2032
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 SIKIICR 8
+IK++CR
Sbjct: 2026 AIKVLCR 2032
85|SequenceR|430|421|TDPLDPSIKI
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 DPLDP 6
DPLDP
Sbjct: 1214 DPLDP 1218
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 DPLDP 6
DPLDP
Sbjct: 1214 DPLDP 1218
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 DPLDP 6
DPLDP
Sbjct: 1214 DPLDP 1218
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 DPLDP 6
DPLDP
Sbjct: 1214 DPLDP 1218
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 DPLDP 6
DPLDP
Sbjct: 1214 DPLDP 1218
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 DPLDP 6
DPLDP
Sbjct: 1214 DPLDP 1218
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 DPLDP 6
DPLDP
Sbjct: 1214 DPLDP 1218
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 DPLDP 6
DPLDP
Sbjct: 1214 DPLDP 1218
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 DPLDP 6
DPLDP
Sbjct: 1214 DPLDP 1218
>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P
Query: 1 TDPLDPSIK 9
T+PL P ++
Sbjct: 9 TEPLSPGLR 17
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 3 PLDPSI 8
PLDPSI
Sbjct: 100 PLDPSI 105
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 DPLDPSI 8
DP+DP +
Sbjct: 799 DPIDPKM 805
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 1 TDPLDPSIKI 10
T PL P+I I
Sbjct: 69 TQPLQPTIHI 78
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 PLDPSIK 9
P+DP I+
Sbjct: 1675 PIDPEIQ 1681
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 PLDPSIK 9
P+DP I+
Sbjct: 1674 PIDPEIQ 1680
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 PLDPSIK 9
P+DP I+
Sbjct: 1675 PIDPEIQ 1681
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 DPLDPSIK 9
DP+ PS++
Sbjct: 970 DPVRPSVR 977
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 PLDPSIKI 10
PLDP++ +
Sbjct: 458 PLDPAVDL 465
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 PLDPSIK 9
P+DP I+
Sbjct: 1674 PIDPEIQ 1680
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 3 PLDPSIK 9
P+DP I+
Sbjct: 1674 PIDPEIQ 1680
>sp|TAT_HV1Z2|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 DPLDPSIK 9
DP+DP+I+
Sbjct: 2 DPVDPNIE 9
>sp|TAT_HV196|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 DPLDPSIK 9
DP+DP+I+
Sbjct: 2 DPVDPNIE 9
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 PLDPSIKI 10
PLDP++ +
Sbjct: 460 PLDPAVDL 467
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 1 TDPLDPSI 8
TDP PS+
Sbjct: 117 TDPFRPSV 124
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 TDPLDPSIK 9
T P DP ++
Sbjct: 738 TPPADPRVR 746
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 3 PLDPSIKI 10
PLD SIK
Sbjct: 164 PLDRSIKF 171
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 2 DPLDPSIK 9
DP++PS+
Sbjct: 108 DPVEPSVS 115
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 2 DPLDPS 7
DP+DPS
Sbjct: 374 DPMDPS 379
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 2 DPLDPSI 8
DPL PS+
Sbjct: 107 DPLGPSV 113
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 PLDPSIKI 10
P+DP++ +
Sbjct: 459 PMDPAVDL 466
>sp|TAT_HV1JR|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 DPLDPSIK 9
+P+DPS++
Sbjct: 2 EPVDPSLE 9
86|SequenceR|435|426|ALVYITDPLD
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LVYITDPLD 10
L+Y TDP D
Sbjct: 288 LMYATDPHD 296
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LVYITDPLD 10
L+Y TDP D
Sbjct: 288 LMYATDPHD 296
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 1 ALVYITDPL 9
A+ Y++DPL
Sbjct: 342 AMPYVSDPL 350
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 LVYITDPL 9
LVY DPL
Sbjct: 1404 LVYDNDPL 1411
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 LVYITDPLD 10
+VY DP+D
Sbjct: 2222 VVYCHDPMD 2230
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 LVYITDPLD 10
+VY DP+D
Sbjct: 2222 VVYCHDPMD 2230
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 LVYITDPL 9
LVY DPL
Sbjct: 1404 LVYDNDPL 1411
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 LVYITDPL 9
L+Y +DPL
Sbjct: 1378 LIYDSDPL 1385
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 LVYITDPL 9
LVY DPL
Sbjct: 1404 LVYDNDPL 1411
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 LVYITDPL 9
LVY DPL
Sbjct: 1404 LVYDNDPL 1411
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 LVYITDPL 9
LVY DPL
Sbjct: 1404 LVYDNDPL 1411
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 YITDPL 9
+ITDPL
Sbjct: 2067 HITDPL 2072
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 YITDPL 9
+ITDPL
Sbjct: 2067 HITDPL 2072
Query: 2 LVYITDP 8
+VY+ DP
Sbjct: 5392 IVYVGDP 5398
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 5 ITDPLD 10
ITDP+D
Sbjct: 54 ITDPID 59
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ALVYITD 7
ALVY TD
Sbjct: 232 ALVYTTD 238
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 3 VYITDPL 9
+YI DP+
Sbjct: 263 IYIIDPV 269
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 ALVYITDP 8
+++Y+ DP
Sbjct: 762 SVIYVADP 769
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 ALVYITDP 8
+++Y+ DP
Sbjct: 762 SVIYVADP 769
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 ALVYITDP 8
+++Y++DP
Sbjct: 703 SVLYVSDP 710
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 ALVYITDP 8
+++Y++DP
Sbjct: 703 SVLYVSDP 710
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 ALVYITDP 8
+++Y++DP
Sbjct: 703 SVLYVSDP 710
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 ALVYITDPLD 10
+L +IT PLD
Sbjct: 5918 SLNFITLPLD 5927
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 LVYITDP 8
+VY+ DP
Sbjct: 5367 IVYVGDP 5373
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 ALVYITDPLD 10
+L +IT PLD
Sbjct: 5968 SLNFITLPLD 5977
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 ALVYITDPLD 10
+L +IT PLD
Sbjct: 5938 SLNFITLPLD 5947
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LVYITDP 8
LVY DP
Sbjct: 4741 LVYAADP 4747
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LVYITDP 8
LVY DP
Sbjct: 4764 LVYAADP 4770
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 LVYITDP 8
+VY+ DP
Sbjct: 5706 IVYVGDP 5712
87|SequenceR|440|431|SDYTLALVYI
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 DYTLALVYI 10
D+T+ LV++
Sbjct: 2366 DFTVVLVFL 2374
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 YTLALVY 9
YT AL Y
Sbjct: 182 YTFALAY 188
88|SequenceR|445|436|WWLRASDYTL
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 3 LRASDYTL 10
+ ASDYTL
Sbjct: 469 MNASDYTL 476
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 3 LRASDYTL 10
+ ASDYTL
Sbjct: 469 MNASDYTL 476
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 LRASDYTL 10
+ ASDYTL
Sbjct: 469 MNASDYTL 476
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 LRASDYTL 10
+ ASDYTL
Sbjct: 469 MNASDYTL 476
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 WWLRASDYTL 10
WW A+ Y L
Sbjct: 40 WWGPATRYNL 49
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 2 WLRASDYTL 10
WL DY+L
Sbjct: 59 WLNPIDYSL 67
>sp|NS1_INBYA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INBHT|NON-STRUCTURAL protein 1|Influenza B virus (strain B/HT/1984)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 2 WLRASDY 8
W RA DY
Sbjct: 36 WQRALDY 42
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 2 WLRASDYTL 10
WL DY+L
Sbjct: 59 WLNPIDYSL 67
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 2 WLRASDYTL 10
WL DY+L
Sbjct: 59 WLNPIDYSL 67
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 WLRASDY 8
W+ SDY
Sbjct: 947 WINESDY 953
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 WLRASDYT 9
WLR + YT
Sbjct: 306 WLRNNSYT 313
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 WWLRASDYTL 10
W LR YTL
Sbjct: 167 WALRPLSYTL 176
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 WLRASDY 8
W+ AS Y
Sbjct: 499 WISASQY 505
89|SequenceR|450|441|YCGFYWWLRA
>sp|NP1_HBOC4|NON-STRUCTURAL protein NP-1|Human bocavirus 4 (HBoV4) (Human
Query: 1 YCGFYW 6
+CGFYW
Sbjct: 103 WCGFYW 108
>sp|NP1_HBOC2|NON-STRUCTURAL protein NP-1|Human bocavirus 2 (HBoV2) (Human
Query: 1 YCGFYW 6
+CGFYW
Sbjct: 103 WCGFYW 108
>sp|NP1_HBOC1|NON-STRUCTURAL protein NP-1|Primate bocaparvovirus 1 (strain Human
Query: 1 YCGFYW 6
+CGFYW
Sbjct: 107 WCGFYW 112
>sp|NP1_HBOC3|NON-STRUCTURAL protein NP-1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 YCGFYW 6
+CGFYW
Sbjct: 106 WCGFYW 111
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 2 CGFYWWLR 9
CG +W+R
Sbjct: 357 CGIVYWMR 364
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 2 CGFYWWLR 9
CG +W+R
Sbjct: 358 CGIVYWMR 365
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 2 CGFYWWLR 9
CG +W+R
Sbjct: 358 CGIVYWMR 365
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 2 CGFYWWLR 9
CG +W+R
Sbjct: 358 CGIVYWMR 365
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 CGFYWWLRA 10
CGF WL++
Sbjct: 534 CGFVTWLQS 542
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 FYWWL 8
++WWL
Sbjct: 303 YFWWL 307
>sp|IR03_HCMVA|UNCHARACTERIZED protein IRL3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CGFYWWL 8
CGFY++L
Sbjct: 93 CGFYFFL 99
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 3 GFYWWL 8
GFY WL
Sbjct: 577 GFYEWL 582
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 GFYWWL 8
GFY WL
Sbjct: 577 GFYEWL 582
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GFYWWL 8
GFY WL
Sbjct: 577 GFYEWL 582
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 3 GFYWWL 8
GFY WL
Sbjct: 577 GFYEWL 582
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 5 YWWL 8
YWWL
Sbjct: 19 YWWL 22
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 YWWL 8
YWWL
Sbjct: 19 YWWL 22
>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)
Query: 5 YWWL 8
YWWL
Sbjct: 277 YWWL 280
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 GFYWWLR 9
GF +WL+
Sbjct: 1048 GFKYWLK 1054
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 GFYWWLR 9
GF +WL+
Sbjct: 1048 GFKYWLK 1054
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 GFYWWLR 9
GF +WL+
Sbjct: 1048 GFKYWLK 1054
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 GFYWWLR 9
GF +WL+
Sbjct: 1047 GFKYWLK 1053
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 GFYWWLR 9
GF +WL+
Sbjct: 1047 GFKYWLK 1053
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 GFYWWLR 9
GF +WL+
Sbjct: 1047 GFKYWLK 1053
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 1 YCGFYWW 7
Y G Y+W
Sbjct: 154 YYGLYYW 160
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 GFYWWLR 9
GF +WL+
Sbjct: 1054 GFKYWLK 1060
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 GFYWWLR 9
GF +WL+
Sbjct: 1055 GFKYWLK 1061
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 GFYWWLR 9
GF +WL+
Sbjct: 1055 GFKYWLK 1061
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 2 CGFYWWL 8
CG +W+
Sbjct: 358 CGIVYWM 364
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 2 CGFYWWL 8
CG +W+
Sbjct: 358 CGIVYWM 364
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 FYWWL 8
F WWL
Sbjct: 846 FLWWL 850
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YCGFYWWL 8
YC WWL
Sbjct: 258 YC---WWL 262
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YCGFYWWL 8
YC WWL
Sbjct: 258 YC---WWL 262
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GFYWWL 8
GF W+L
Sbjct: 439 GFVWYL 444
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GFYWWL 8
GF W+L
Sbjct: 439 GFVWYL 444
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 CGFYWWL 8
C FY W+
Sbjct: 370 CDFYGWV 376
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 CGFYWWL 8
C FY W+
Sbjct: 370 CDFYGWV 376
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 FYWWLR 9
+WWL+
Sbjct: 461 LWWWLQ 466
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 FYWWL 8
F WW+
Sbjct: 487 FVWWV 491
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 CGFYWWL 8
C FY W+
Sbjct: 370 CDFYGWV 376
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CGFYWWL 8
C FY W+
Sbjct: 370 CDFYGWV 376
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CGFYWWL 8
C FY W+
Sbjct: 370 CDFYGWV 376
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 CGFYWWL 8
C FY W+
Sbjct: 370 CDFYGWV 376
>sp|CAPSD_HCYV5|CAPSID protein|Human associated cyclovirus 1 (isolate
Query: 1 YCGFYW 6
YC F W
Sbjct: 103 YCMFPW 108
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 FYWWL 8
F WWL
Sbjct: 4 FRWWL 8
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 FYWWL 8
F WWL
Sbjct: 4 FRWWL 8
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 GFYWWLR 9
GF +W++
Sbjct: 1054 GFKYWIK 1060
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 GFYWWLR 9
GF +W++
Sbjct: 1054 GFKYWIK 1060
>sp|US8A_HHV11|PROTEIN US8.5|Human herpesvirus 1 (strain 17)
Query: 2 CGFYWWL 8
CG W++
Sbjct: 146 CGIAWYV 152
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 CGFY---WWLR 9
CGFY W +R
Sbjct: 2963 CGFYLFNWAVR 2973
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 3 GFYWWL 8
G Y+W+
Sbjct: 208 GMYYWV 213
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 3 GFYWWL 8
G Y+W+
Sbjct: 209 GMYYWV 214
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 CGFYW 6
CG YW
Sbjct: 28 CGGYW 32
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 3 GFYWWL 8
G Y+W+
Sbjct: 209 GMYYWV 214
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YCGFYW 6
Y GF W
Sbjct: 427 YMGFLW 432
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 1 YCGFYW 6
Y GF W
Sbjct: 427 YMGFLW 432
90|SequenceR|455|446|TPLCFYCGFY
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 TPLCFY 6
TPLCFY
Sbjct: 49 TPLCFY 54
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TPLCFYC 7
+ LCFYC
Sbjct: 66 SELCFYC 72
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TPLCFYC 7
+ LCFYC
Sbjct: 66 SELCFYC 72
>sp|IR09_HCMVA|UNCHARACTERIZED protein IRL9|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PLCFYCG 8
P CF CG
Sbjct: 6 PRCFCCG 12
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 4 CFYCG 8
CF+CG
Sbjct: 452 CFHCG 456
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 CFYCGF 9
C +CGF
Sbjct: 612 CIFCGF 617
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 CFYCGF 9
C +CGF
Sbjct: 612 CIFCGF 617
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 CFYCGF 9
C +CGF
Sbjct: 612 CIFCGF 617
>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LCFYCGFY 10
LC+ CG Y
Sbjct: 397 LCYLCGTY 404
>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LCFYCGFY 10
LC+ CG Y
Sbjct: 397 LCYLCGTY 404
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 CFYCG 8
C YCG
Sbjct: 724 CLYCG 728
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 4 CFYCG 8
C YCG
Sbjct: 724 CLYCG 728
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 2 PLCFYC 7
P C YC
Sbjct: 237 PYCLYC 242
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 LCFYCG 8
LCFY G
Sbjct: 1470 LCFYLG 1475
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 PLCFYCGFY 10
P+ FY FY
Sbjct: 924 PVVFYRSFY 932
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 LCFYCG 8
LCFY G
Sbjct: 1470 LCFYLG 1475
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 PLCFYCGF 9
P+C+ GF
Sbjct: 613 PMCYRAGF 620
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 1 TPLCFYCGFY 10
TP C Y F+
Sbjct: 352 TPYCNYTKFW 361
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 1 TPLCFYCGFY 10
TP C Y F+
Sbjct: 356 TPYCNYTKFW 365
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LCFYCGF 9
LCF C F
Sbjct: 56 LCFLCIF 62
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LCFYCGF 9
LCF C F
Sbjct: 56 LCFLCIF 62
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 TPLCFY 6
TPL FY
Sbjct: 348 TPLAFY 353
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 TPLCFY 6
TPL FY
Sbjct: 358 TPLAFY 363
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TPLCFYCGFY 10
+ +C +C Y
Sbjct: 272 SQMCIFCALY 281
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 6 YCGFY 10
YCG Y
Sbjct: 818 YCGMY 822
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 1 TPLCFYCGFY 10
+ +C +C Y
Sbjct: 272 SQMCIFCALY 281
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 1 TPLCFYCGFY 10
+ +C +C Y
Sbjct: 272 SQMCIFCALY 281
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 3 LCFYCGFY 10
+C +C Y
Sbjct: 267 ICLFCALY 274
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 4 CFYCG 8
CF CG
Sbjct: 363 CFRCG 367
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 4 CFYCG 8
CF CG
Sbjct: 357 CFRCG 361
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 4 CFYCG 8
CF CG
Sbjct: 357 CFRCG 361
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 4 CFYCG 8
CF CG
Sbjct: 357 CFRCG 361
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 CFYCG 8
CF CG
Sbjct: 351 CFRCG 355
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 4 CFYCG 8
CF CG
Sbjct: 357 CFRCG 361
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 4 CFYCG 8
CF CG
Sbjct: 357 CFRCG 361
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 4 CFYCG 8
CF CG
Sbjct: 357 CFRCG 361
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 4 CFYCG 8
CF CG
Sbjct: 351 CFRCG 355
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 4 CFYCG 8
CF CG
Sbjct: 357 CFRCG 361
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 4 CFYCG 8
CF CG
Sbjct: 357 CFRCG 361
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 4 CFYCG 8
CF CG
Sbjct: 357 CFRCG 361
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 4 CFYCG 8
CF CG
Sbjct: 357 CFRCG 361
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 4 CFYCG 8
CF CG
Sbjct: 351 CFRCG 355
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 CFYCG 8
CF CG
Sbjct: 351 CFRCG 355
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 CFYCG 8
CF CG
Sbjct: 351 CFRCG 355
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 4 CFYCG 8
CF CG
Sbjct: 363 CFRCG 367
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 CFYCG 8
CF CG
Sbjct: 351 CFRCG 355
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 5 FYCG 8
FYCG
Sbjct: 1002 FYCG 1005
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 5 FYCG 8
FYCG
Sbjct: 999 FYCG 1002
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 394 CFNCG 398
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 395 CFNCG 399
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 394 CFNCG 398
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 386 CFNCG 390
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 386 CFNCG 390
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 393 CFNCG 397
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 391 CFNCG 395
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 391 CFNCG 395
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 391 CFNCG 395
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 390 CFNCG 394
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 396 CFNCG 400
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 387 CFNCG 391
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 395 CFNCG 399
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 398 CFNCG 402
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 391 CFNCG 395
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 389 CFNCG 393
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 393 CFNCG 397
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 396 CFNCG 400
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 394 CFNCG 398
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 393 CFNCG 397
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 387 CFNCG 391
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 387 CFNCG 391
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 387 CFNCG 391
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 389 CFNCG 393
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 393 CFNCG 397
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 394 CFNCG 398
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 395 CFNCG 399
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 394 CFNCG 398
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 386 CFNCG 390
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 386 CFNCG 390
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 393 CFNCG 397
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 391 CFNCG 395
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 391 CFNCG 395
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 391 CFNCG 395
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 390 CFNCG 394
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 396 CFNCG 400
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 387 CFNCG 391
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 395 CFNCG 399
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 398 CFNCG 402
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 391 CFNCG 395
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 389 CFNCG 393
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 393 CFNCG 397
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 392 CFNCG 396
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 396 CFNCG 400
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 394 CFNCG 398
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 393 CFNCG 397
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 387 CFNCG 391
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 387 CFNCG 391
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 387 CFNCG 391
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 389 CFNCG 393
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CFYCG 8
CF CG
Sbjct: 393 CFNCG 397
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 6 YCGFY 10
YC FY
Sbjct: 761 YCNFY 765
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 LCFYCG 8
+C YCG
Sbjct: 923 VCSYCG 928
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 4 CFYCG 8
CF CG
Sbjct: 363 CFRCG 367
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 TPLCFY 6
T LCFY
Sbjct: 1516 TSLCFY 1521
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 3 LCFYCGF 9
+C +CG
Sbjct: 89 ICIHCGL 95
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 3 LCFYCGF 9
+C +CG
Sbjct: 89 ICIHCGL 95
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LCFYCGF 9
+C +CG
Sbjct: 89 ICIHCGL 95
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 LCFYCGF 9
+C +CG
Sbjct: 89 ICIHCGL 95
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 3 LCFYCGF 9
+C +CG
Sbjct: 89 ICIHCGL 95
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PLCFYCGF 9
P + CGF
Sbjct: 5 PSVYVCGF 12
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PLCFYCGF 9
P + CGF
Sbjct: 5 PSVYVCGF 12
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PLCFYCGF 9
P + CGF
Sbjct: 5 PSVYVCGF 12
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 4 CFYCG 8
CF+C
Sbjct: 246 CFFCA 250
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 4 CFYCG 8
C++CG
Sbjct: 139 CYHCG 143
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 CFYCG 8
C++CG
Sbjct: 139 CYHCG 143
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 6 YCGFY 10
YC FY
Sbjct: 922 YCSFY 926
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 TPLCFYCGFY 10
TP C + GFY
Sbjct: 209 TP-CLHQGFY 217
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TPLCFYCGFY 10
TP C + GFY
Sbjct: 210 TP-CLHQGFY 218
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 6 YCGFY 10
YC FY
Sbjct: 921 YCSFY 925
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TPLCFYCGFY 10
TP C + GFY
Sbjct: 209 TP-CLHQGFY 217
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 4 CFYCG 8
C YCG
Sbjct: 153 CEYCG 157
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LCFYCGF 9
LCF C +
Sbjct: 225 LCFKCSY 231
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 4 CFYCG 8
CF+C
Sbjct: 246 CFFCA 250
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LCFYCGF 9
LCF C +
Sbjct: 225 LCFKCSY 231
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 6 YCGFY 10
YCG Y
Sbjct: 2813 YCGSY 2817
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 6 YCGFY 10
YCG Y
Sbjct: 2812 YCGSY 2816
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 6 YCGFY 10
YCG Y
Sbjct: 2813 YCGSY 2817
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 6 YCGFY 10
YCG Y
Sbjct: 2812 YCGSY 2816
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 6 YCGFY 10
YCG Y
Sbjct: 2812 YCGSY 2816
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 6 YCGFY 10
YCG Y
Sbjct: 2813 YCGSY 2817
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 6 YCGFY 10
YCG Y
Sbjct: 2812 YCGSY 2816
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 6 YCGFY 10
YCG Y
Sbjct: 2812 YCGSY 2816
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 6 YCGFY 10
YCG Y
Sbjct: 2812 YCGSY 2816
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 TPLCFYCG 8
TP+C Y G
Sbjct: 900 TPICEYDG 907
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 TPLCFYCG 8
TP YCG
Sbjct: 445 TPAPAYCG 452
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 TPLCFYCG 8
TP+C Y G
Sbjct: 900 TPICEYDG 907
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 TPLCFYCG 8
TP+C Y G
Sbjct: 901 TPICEYDG 908
91|SequenceR|460|451|TITFLTPLCF
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TITFLTPLCF 10
TITF+ CF
Sbjct: 34 TITFMVSCCF 43
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 118 LTPLC 122
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 122 LTPLC 126
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 122 LTPLC 126
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 122 LTPLC 126
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 122 LTPLC 126
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 122 LTPLC 126
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 122 LTPLC 126
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 122 LTPLC 126
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 127 LTPLC 131
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 122 LTPLC 126
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 113 LTPLC 117
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 101 LTPLC 105
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 111 LTPLC 115
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 104 LTPLC 108
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 121 LTPLC 125
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 103 LTPLC 107
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 123 LTPLC 127
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
LTPLC
Sbjct: 118 LTPLC 122
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 104 LTPLC 108
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 103 LTPLC 107
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 104 LTPLC 108
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 104 LTPLC 108
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 103 LTPLC 107
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 103 LTPLC 107
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 2 ITFLTPL 8
I+F+TPL
Sbjct: 13 ISFITPL 19
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 TFLTPL 8
TFLTP+
Sbjct: 2286 TFLTPV 2291
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 105 LTPLC 109
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 104 LTPLC 108
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 106 LTPLC 110
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LTPLC 9
LTPLC
Sbjct: 103 LTPLC 107
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 TFLTPL 8
TF+TP+
Sbjct: 2289 TFITPM 2294
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 TFLTPL 8
TF+TP+
Sbjct: 2286 TFITPM 2291
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
+TPLC
Sbjct: 118 ITPLC 122
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 LTPLC 9
+TPLC
Sbjct: 402 ITPLC 406
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 LTPLC 9
+TPLC
Sbjct: 402 ITPLC 406
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 FLTPL 8
FLTPL
Sbjct: 2316 FLTPL 2320
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 LTPLC 9
+TPLC
Sbjct: 118 ITPLC 122
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 LTPLC 9
+TPLC
Sbjct: 402 ITPLC 406
92|SequenceR|465|456|TVLSCTITFL
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 5 CTITFL 10
CTI+FL
Sbjct: 233 CTISFL 238
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 5 CTITFL 10
CT++FL
Sbjct: 225 CTVSFL 230
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 5 CTITFL 10
CT++FL
Sbjct: 225 CTVSFL 230
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 5 CTITFL 10
CT++FL
Sbjct: 225 CTVSFL 230
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 1 TVLSCTITF 9
T L CT+TF
Sbjct: 138 TPLLCTLTF 146
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 SCTITFL 10
SC++T+L
Sbjct: 1668 SCSLTYL 1674
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 TVLSCTITFL 10
T+ CT+T+L
Sbjct: 6386 TLKCCTVTYL 6395
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 SCTITFL 10
SC++T+L
Sbjct: 1668 SCSLTYL 1674
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 SCTITFL 10
SC++T+L
Sbjct: 1668 SCSLTYL 1674
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 LSCTITF 9
L+C ITF
Sbjct: 1040 LTCVITF 1046
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 LSCTITF 9
L+C ITF
Sbjct: 1040 LTCIITF 1046
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 LSCTITF 9
L+C ITF
Sbjct: 1040 LTCIITF 1046
93|SequenceR|470|461|RIKRATVLSC
***** No hits found ******
94|SequenceR|475|466|AKEAKRIKRA
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 AKEAKRIK 8
A EAKRIK
Sbjct: 1179 ASEAKRIK 1186
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 AKEAKRIK 8
A EAKRIK
Sbjct: 1182 ASEAKRIK 1189
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 AKEAKRIK 8
A EAKRIK
Sbjct: 1186 AHEAKRIK 1193
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 AKEAKRIK 8
A EAKRIK
Sbjct: 1186 AHEAKRIK 1193
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 2 KEAKRIKRA 10
+ AKR KRA
Sbjct: 5 RSAKRTKRA 13
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 AKEAKRIK 8
A EA+RIK
Sbjct: 1195 ASEARRIK 1202
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 AKEAKRIK 8
A EAKRI+
Sbjct: 1194 ASEAKRIR 1201
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 2 KEAKRIKRA 10
+ KR+KRA
Sbjct: 5 RSTKRVKRA 13
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 4 AKRIKRA 10
A+R+KRA
Sbjct: 4 ARRVKRA 10
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 4 AKRIKRA 10
AKR KRA
Sbjct: 4 AKRTKRA 10
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 4 AKRIKR 9
AKR+KR
Sbjct: 4 AKRVKR 9
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 4 AKRIKR 9
AKR+KR
Sbjct: 4 AKRVKR 9
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 4 AKRIKR 9
AKR+KR
Sbjct: 4 AKRVKR 9
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 4 AKRIKR 9
AKR+KR
Sbjct: 4 AKRVKR 9
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 4 AKRIKR 9
AKR+KR
Sbjct: 4 AKRVKR 9
95|SequenceR|480|471|NGRTCAKEAK
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 TCAKEAK 10
TCAKE K
Sbjct: 666 TCAKEIK 672
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 TCAKEAK 10
TCAKE K
Sbjct: 666 TCAKEIK 672
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NGRTCAKE 8
NG TC E
Sbjct: 380 NGHTCMSE 387
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 1 NGRTCAKE 8
NG TC E
Sbjct: 350 NGHTCMSE 357
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 NGRTCAKE 8
NG TC E
Sbjct: 354 NGNTCMSE 361
>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 1 NGRTCAKEA 9
NGR KEA
Sbjct: 237 NGRMSHKEA 245
>sp|PHOSP_VSIVM|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 1 NGRTCAKEA 9
NGR KEA
Sbjct: 237 NGRMSHKEA 245
>sp|PHOSP_VSIVS|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 1 NGRTCAKEA 9
NGR KEA
Sbjct: 237 NGRMSHKEA 245
>sp|PHOSP_VSIVG|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 1 NGRTCAKEA 9
NGR KEA
Sbjct: 237 NGRMSHKEA 245
96|SequenceR|485|476|QIQRKNGRTC
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QIQRKNGRTC 10
+++R+N R C
Sbjct: 52 RLRRQNDRAC 61
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 5 KNGRTC 10
K GRTC
Sbjct: 221 KGGRTC 226
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 4 RKNGRTC 10
RK GR C
Sbjct: 684 RKGGRLC 690
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 4 RKNGRTC 10
RK GR C
Sbjct: 755 RKGGRLC 761
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 4 RKNGRTC 10
RK GR C
Sbjct: 760 RKGGRLC 766
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 4 RKNGRTC 10
RK GR C
Sbjct: 760 RKGGRLC 766
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 4 RKNGRTC 10
RK GR C
Sbjct: 751 RKGGRLC 757
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QIQRKNG 7
Q+QRK+G
Sbjct: 2687 QMQRKHG 2693
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QIQRKNG 7
Q+QRK+G
Sbjct: 2688 QMQRKHG 2694
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QIQRKNG 7
Q+QRK+G
Sbjct: 2688 QMQRKHG 2694
>sp|ORF23_TTVV5|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 QIQRKNGR 8
IQRK GR
Sbjct: 219 HIQRKKGR 226
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 IQRKNGRTC 10
I+ NG TC
Sbjct: 478 IRSNNGYTC 486
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 IQRKNGRTC 10
I+ NG TC
Sbjct: 487 IRSNNGYTC 495
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 IQRKNGRTC 10
I+ NG TC
Sbjct: 487 IRSNNGYTC 495
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 1 QIQRKNGRTC 10
QI++ GR C
Sbjct: 406 QIEQLLGRVC 415
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 1 QIQRKNGRTC 10
QI++ GR C
Sbjct: 406 QIEQLLGRVC 415
>sp|A18_CWPXB|TRANSCRIPT termination protein A18|Cowpox virus (strain Brighton Red)
Query: 1 QIQRKNGRTC 10
QI++ GR C
Sbjct: 406 QIEQLLGRVC 415
>sp|PG145_VACCC|TRANSCRIPT termination protein OPG145|Vaccinia virus (strain Copenhagen)
Query: 1 QIQRKNGRTC 10
QI++ GR C
Sbjct: 406 QIEQLLGRVC 415
>sp|PG145_MONPV|TRANSCRIPT termination protein OPG145|Monkeypox virus (MPXV)
Query: 1 QIQRKNGRTC 10
QI++ GR C
Sbjct: 406 QIEQLLGRVC 415
>sp|A18_VACCA|TRANSCRIPT termination protein A18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 QIQRKNGRTC 10
QI++ GR C
Sbjct: 406 QIEQLLGRVC 415
>sp|A18_CWPXG|TRANSCRIPT termination protein A18|Cowpox virus (strain GRI-90 /
Query: 1 QIQRKNGRTC 10
QI++ GR C
Sbjct: 406 QIEQLLGRVC 415
>sp|A18_VACCT|TRANSCRIPT termination protein A18|Vaccinia virus (strain Tian Tan)
Query: 1 QIQRKNGRTC 10
QI++ GR C
Sbjct: 406 QIEQLLGRVC 415
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 2 IQRKNGRT 9
+Q+K G+T
Sbjct: 664 LQKKKGKT 671
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 2 IQRKNGRT 9
+Q+K G+T
Sbjct: 663 LQKKKGKT 670
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 2 IQRKNGRT 9
+Q+K G+T
Sbjct: 663 LQKKKGKT 670
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 2 IQRKNGRT 9
+Q+K G+T
Sbjct: 663 LQKKKGKT 670
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 IQRKNGRT 9
+Q+K G+T
Sbjct: 664 LQKKKGKT 671
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 IQRKNGRT 9
+Q+K G+T
Sbjct: 663 LQKKKGKT 670
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 IQRKNGRT 9
+Q+K G+T
Sbjct: 663 LQKKKGKT 670
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 IQRKNGRT 9
+Q+K G+T
Sbjct: 663 LQKKKGKT 670
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 5 KNGRTC 10
K G+TC
Sbjct: 221 KGGKTC 226
97|SequenceR|490|481|MQSELQIQRK
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 1 MQSELQIQRK 10
++S LQ++RK
Sbjct: 274 IKSTLQVKRK 283
98|SequenceR|495|486|VVTCNMQSEL
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 VTCNMQSE 9
VTCNM++E
Sbjct: 141 VTCNMRAE 148
>sp|E320_ADE1P|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 VVTCNMQS 8
+VTCN+Q+
Sbjct: 63 IVTCNIQN 70
>sp|E320_ADE35|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 35
Query: 1 VVTCNMQS 8
+VTCN+Q+
Sbjct: 63 IVTCNIQN 70
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 VTCNMQSEL 10
VTC MQ+ L
Sbjct: 511 VTCFMQTNL 519
>sp|E320_ADE1A|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 VVTCNMQS 8
+VTCN+Q+
Sbjct: 63 IVTCNIQN 70
>sp|K5_VACCC|PROTEIN K5|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VVTCNMQ 7
+++CNMQ
Sbjct: 125 IISCNMQ 131
99|SequenceR|500|491|LITLAVVTCN
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 TLAVVTCN 10
T+AV TCN
Sbjct: 1945 TIAVATCN 1952
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 TLAVVTCN 10
TLA++ CN
Sbjct: 1083 TLALLGCN 1090
100|SequenceR|505|496|ICFGYLITLA
>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGKLMTLA 69
>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|CAPSD_HBVF6|CAPSID protein|Hepatitis B virus genotype F2
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|CAPSD_HBVB7|CAPSID protein|Hepatitis B virus genotype B1
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 72 LCWGELMTLA 81
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 1 ICFGYLITLA 10
+C+G LITL+
Sbjct: 60 LCWGDLITLS 69
>sp|CAPSD_HBVD3|CAPSID protein|Hepatitis B virus genotype D
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 72 LCWGELMTLA 81
>sp|CAPSD_HBVD6|CAPSID protein|Hepatitis B virus genotype D
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGELMTLA 69
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate
Query: 2 CFGYLITLA 10
CF +ITLA
Sbjct: 35 CFNEIITLA 43
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 2 CFGYLITLA 10
CF +ITLA
Sbjct: 35 CFNEIITLA 43
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 CFGYLITLA 10
CF +ITLA
Sbjct: 35 CFNEIITLA 43
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 CFGYLITLA 10
CF +ITLA
Sbjct: 35 CFNEIITLA 43
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CFGYLITLA 10
CF +ITLA
Sbjct: 35 CFNEIITLA 43
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CFGYLITLA 10
CF +ITLA
Sbjct: 35 CFNEIITLA 43
>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D
Query: 1 ICFGYLITLA 10
+C+G LITL+
Sbjct: 60 LCWGDLITLS 69
>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 60 LCWGDLMTLA 69
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGELMTLA 98
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGELMTLA 98
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGELMTLA 98
>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGKLMTLA 98
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGELMTLA 98
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGELMTLA 98
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGELMTLA 98
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 CF----GYLITLA 10
CF GY++TLA
Sbjct: 279 CFNENQGYMLTLA 291
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 2 CF----GYLITLA 10
CF GY++TLA
Sbjct: 279 CFNETQGYMLTLA 291
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 CF----GYLITLA 10
CF GY++TLA
Sbjct: 279 CFNENQGYMLTLA 291
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 2 CF----GYLITLA 10
CF GY++TLA
Sbjct: 279 CFNENQGYMLTLA 291
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 2 CF----GYLITLA 10
CF GY++TLA
Sbjct: 279 CFNENQGYMLTLA 291
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGELMTLA 98
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGELMTLA 98
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGELMTLA 98
>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGELMTLA 98
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 2 CFGYLITLA 10
CFG +T+A
Sbjct: 737 CFGQHVTIA 745
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 2 CFGYLITLA 10
CFG +T+A
Sbjct: 737 CFGQHVTIA 745
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 CFGYLITLA 10
CFG +T+A
Sbjct: 737 CFGQHVTIA 745
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CFGYLITLA 10
CFG +T+A
Sbjct: 737 CFGQHVTIA 745
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CFGYLITLA 10
CFG +T+A
Sbjct: 729 CFGQHVTIA 737
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 2 CFGYLITLA 10
CFG +T+A
Sbjct: 737 CFGQHVTIA 745
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 2 CFGYLITLA 10
CFG +T+A
Sbjct: 737 CFGQHVTIA 745
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 2 CFGYLITLA 10
CFG +T+A
Sbjct: 737 CFGQHVTIA 745
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 2 CFGYLITLA 10
CFG +T+A
Sbjct: 737 CFGQHVTIA 745
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGELMTLA 98
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 ICFGY 5
+CFGY
Sbjct: 442 LCFGY 446
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 1 ICFGYLITLA 10
+C+G L+TLA
Sbjct: 89 LCWGELMTLA 98
>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 ICFGYLITL 9
+CFG+L L
Sbjct: 168 MCFGWLWKL 176
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 FGYLITL 9
FGYL+ L
Sbjct: 1248 FGYLLVL 1254
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 FGYLIT 8
FGY+IT
Sbjct: 699 FGYVIT 704
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 FGYLITL 9
FGY +TL
Sbjct: 1492 FGYWLTL 1498
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 3 FGYLITL 9
FGY +TL
Sbjct: 1421 FGYWLTL 1427
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 FGYLITL 9
FGY +TL
Sbjct: 1493 FGYWLTL 1499
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 FGYLITL 9
FGY +TL
Sbjct: 1493 FGYWLTL 1499
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 FGYLITL 9
FGY +TL
Sbjct: 1493 FGYWLTL 1499
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 FGYLITL 9
FGY +TL
Sbjct: 1493 FGYWLTL 1499
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 ICFGYLI 7
+CF YL+
Sbjct: 1026 MCFKYLL 1032
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 CFGYLITLA 10
CFG+L+ A
Sbjct: 496 CFGWLLIPA 504
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 2 CFGY 5
CFGY
Sbjct: 189 CFGY 192
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 2 CFGY 5
CFGY
Sbjct: 189 CFGY 192
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 2 CFGYLI 7
CFG+L+
Sbjct: 496 CFGWLL 501
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 CFGYLI 7
CFG+L+
Sbjct: 498 CFGWLL 503
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CFGY 5
CFGY
Sbjct: 189 CFGY 192
>sp|UL140_HCMVM|PROTEIN UL140|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ICFGYLIT 8
+ FG+++T
Sbjct: 30 VVFGFIVT 37
101|SequenceR|510|501|INEPIICFGY
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 EPIICFGY 10
EPII FG+
Sbjct: 606 EPIITFGF 613
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 INEPIICFG 9
+NE + CFG
Sbjct: 833 VNETVKCFG 841
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EPIICFGY 10
EP++C+ Y
Sbjct: 1222 EPVVCYLY 1229
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EPIICFGY 10
EP++C+ Y
Sbjct: 1222 EPVVCYLY 1229
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EPIICFGY 10
EP++C+ Y
Sbjct: 1222 EPVVCYLY 1229
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EPIICFGY 10
EP++C+ Y
Sbjct: 1222 EPVVCYLY 1229
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EPIICFGY 10
EP++C+ Y
Sbjct: 1222 EPVVCYLY 1229
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EPIICFGY 10
EP++C+ Y
Sbjct: 1222 EPVVCYLY 1229
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EPIICFGY 10
EP++C+ Y
Sbjct: 1222 EPVVCYLY 1229
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EPIICFGY 10
EP++C+ Y
Sbjct: 1222 EPVVCYLY 1229
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 INEPIICFG 9
+NE + CFG
Sbjct: 826 VNETVKCFG 834
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 4 PIICFGY 10
P+IC G+
Sbjct: 5 PVICLGF 11
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 4 PIICFGY 10
P+IC G+
Sbjct: 5 PVICLGF 11
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 4 PIICFGY 10
P+IC G+
Sbjct: 5 PVICLGF 11
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 EPIICFGY 10
EP+I FG+
Sbjct: 606 EPMITFGF 613
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 EPIICFGY 10
EP+I FG+
Sbjct: 607 EPMITFGF 614
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 EPIICFGY 10
EP+I FG+
Sbjct: 607 EPMITFGF 614
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 EPIICFGY 10
EP+I FG+
Sbjct: 607 EPMITFGF 614
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 EPIICFGY 10
EP+I FG+
Sbjct: 607 EPMITFGF 614
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EPIICF 8
EP++C+
Sbjct: 1222 EPVVCY 1227
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 INEPIICFG 9
+NE CFG
Sbjct: 833 VNETTSCFG 841
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 INEPIICFGY 10
+ EP+I F Y
Sbjct: 3086 VAEPLIKFAY 3095
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 4 PIICF 8
P+ICF
Sbjct: 140 PVICF 144
>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PIICF 8
P+ICF
Sbjct: 140 PVICF 144
>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)
Query: 4 PIICF 8
P+ICF
Sbjct: 140 PVICF 144
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 2 NEPIICFG 9
N+P IC G
Sbjct: 378 NKPAICTG 385
>sp|UL24_HHV7J|PROTEIN UL24 homolog|Human herpesvirus 7 (strain JI)
Query: 4 PIICF 8
P+ICF
Sbjct: 140 PVICF 144
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 NEPIICF 8
N PI C+
Sbjct: 2031 NRPITCY 2037
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 INEPIICF 8
I +PI CF
Sbjct: 389 IRKPIKCF 396
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 INEPIICF 8
I +PI CF
Sbjct: 389 IRKPIKCF 396
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 NEPIICF 8
N P+ CF
Sbjct: 1561 NTPLTCF 1567
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 2 NEPIICFGY 10
N IC GY
Sbjct: 16 NADTICIGY 24
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 NEPIICF 8
N P CF
Sbjct: 456 NRPFFCF 462
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 INEPIIC 7
INE +IC
Sbjct: 344 INENVIC 350
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 INEPIIC 7
INE +IC
Sbjct: 344 INENVIC 350
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 INEPIIC 7
INE +IC
Sbjct: 344 INENVIC 350
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 INEPIIC 7
INE +IC
Sbjct: 344 INENVIC 350
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 4 PIICFG 9
PI+C G
Sbjct: 288 PILCIG 293
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PIICFG 9
PI+C G
Sbjct: 282 PILCIG 287
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 NEPIICFGY 10
N P+I F Y
Sbjct: 1918 NIPLILFNY 1926
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 NEPIICFGY 10
N P+I F Y
Sbjct: 1918 NIPLILFNY 1926
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 NEPIICFGY 10
N P+I F Y
Sbjct: 1918 NIPLILFNY 1926
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate
Query: 4 PIICFG 9
PIIC G
Sbjct: 23 PIICAG 28
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 INEPIICFGY 10
++EP C G+
Sbjct: 116 VSEPTHCSGF 125
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 2 NEPIICFG 9
N+P +C G
Sbjct: 379 NKPALCTG 386
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 2 NEPIICFG 9
N+P +C G
Sbjct: 380 NKPALCTG 387
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 2 NEPIICFG 9
N+P +C G
Sbjct: 379 NKPALCTG 386
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 2 NEPIICFG 9
N+P +C G
Sbjct: 379 NKPALCTG 386
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 2 NEPIICFG 9
N+P +C G
Sbjct: 381 NKPALCTG 388
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 2 NEPIICFG 9
N+P +C G
Sbjct: 379 NKPALCTG 386
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 2 NEPIICFG 9
N+P +C G
Sbjct: 379 NKPALCTG 386
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 INEPIICF 8
+++PI+C
Sbjct: 418 LSQPILCL 425
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 4 PIICFG 9
PI+C G
Sbjct: 337 PILCIG 342
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PIICFG 9
PI+C G
Sbjct: 282 PILCIG 287
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 1 INEPIICF 8
I+ P++CF
Sbjct: 277 ISLPVLCF 284
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 NEPIICF 8
N P+ CF
Sbjct: 1558 NTPLSCF 1564
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 5 IICFGY 10
+IC+G+
Sbjct: 65 LICYGF 70
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 4 PIICF 8
P+ICF
Sbjct: 217 PVICF 221
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 NEPIICFGY 10
N P + GY
Sbjct: 3191 NNPAVVMGY 3199
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 NEPIICFGY 10
N P + GY
Sbjct: 3103 NNPAVVMGY 3111
102|SequenceR|515|506|TVINCINEPI
>sp|PG036_VARV|PROTEIN OPG036|Variola virus
Query: 2 VINCINEPI 10
+INCIN I
Sbjct: 33 IINCINRHI 41
>sp|PG036_VAR67|PROTEIN OPG036|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 VINCINEPI 10
+INCIN I
Sbjct: 33 IINCINRHI 41
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 4 NCINEP 9
NC+N P
Sbjct: 393 NCLNNP 398
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 4 NCINEP 9
NC+N P
Sbjct: 393 NCLNNP 398
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 4 NCINEP 9
NC+N P
Sbjct: 393 NCLNNP 398
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 4 NCINEP 9
NC+N P
Sbjct: 393 NCLNNP 398
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 4 NCINEP 9
NC+N P
Sbjct: 393 NCLNNP 398
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 TVINCINEPI 10
T+IN ++P+
Sbjct: 662 TLINSTSQPV 671
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 2 VINCINEPI 10
VIN +EPI
Sbjct: 94 VINNFSEPI 102
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TVINCINEPI 10
TV+ C+ + I
Sbjct: 370 TVVKCLTDQI 379
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TVINCINEPI 10
TV+ C+ + I
Sbjct: 370 TVVKCLTDQI 379
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TVINCINEPI 10
TV+ C+ + I
Sbjct: 370 TVVKCLTDQI 379
103|SequenceR|520|511|TAMYATVINC
>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51
Query: 3 MYATVINC 10
MY TVI C
Sbjct: 187 MYGTVITC 194
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TAMYATVINC 10
T MY ++NC
Sbjct: 836 TPMYKKLLNC 845
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 TAMYATVINC 10
T YAT ++C
Sbjct: 850 TQFYATTLSC 859
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 4 YATVINC 10
Y T +NC
Sbjct: 246 YGTTVNC 252
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 4 YATVINC 10
Y T +NC
Sbjct: 265 YGTTVNC 271
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 4 YATVINC 10
Y T +NC
Sbjct: 265 YGTTVNC 271
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 4 YATVINC 10
Y T +NC
Sbjct: 265 YGTTVNC 271
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 4 YATVINC 10
Y T +NC
Sbjct: 260 YGTTVNC 266
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 4 YATVINC 10
Y T +NC
Sbjct: 260 YGTTVNC 266
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 4 YATVINC 10
Y T +NC
Sbjct: 264 YGTTVNC 270
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 2 AMYATVINC 10
A+YA++I C
Sbjct: 764 AIYASIIAC 772
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 4 YATVINC 10
Y T++NC
Sbjct: 227 YQTLLNC 233
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 4 YATVINC 10
Y T++NC
Sbjct: 227 YQTLLNC 233
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 AMYATVI 8
A+YATV+
Sbjct: 1068 AIYATVV 1074
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 AMYATVI 8
A+YATV+
Sbjct: 1068 AIYATVV 1074
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 3 MYATVINC 10
MY ++++C
Sbjct: 250 MYTSIMSC 257
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 4 YATVIN 9
YATV+N
Sbjct: 690 YATVMN 695
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 YATVIN 9
YATV+N
Sbjct: 690 YATVMN 695
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 4 YATVIN 9
YATV+N
Sbjct: 690 YATVMN 695
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 4 YATVIN 9
YATV+N
Sbjct: 691 YATVMN 696
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 4 YATVIN 9
YATV+N
Sbjct: 690 YATVMN 695
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 4 YATVIN 9
YATV+N
Sbjct: 690 YATVMN 695
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 TAMYAT 6
TA+YAT
Sbjct: 20 TALYAT 25
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 TAMYAT 6
TA+YAT
Sbjct: 21 TALYAT 26
104|SequenceR|525|516|QQSVGTAMYA
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QSVGTAMYA 10
Q VG AMYA
Sbjct: 422 QEVGKAMYA 430
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QSVGTAMYA 10
Q VG AMYA
Sbjct: 425 QGVGKAMYA 433
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QSVGTAMYA 10
Q VG AMYA
Sbjct: 428 QRVGQAMYA 436
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 SVGTAMY 9
++GTAMY
Sbjct: 135 TIGTAMY 141
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 3 SVGTAMY 9
++GTAMY
Sbjct: 135 TIGTAMY 141
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 3 SVGTAMY 9
++GTAMY
Sbjct: 135 TIGTAMY 141
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 QQSVGTAMY 9
+ VGT MY
Sbjct: 285 KNRVGTGMY 293
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 3 SVGTAMYA 10
S+G A+YA
Sbjct: 199 SIGDAIYA 206
105|SequenceR|530|521|LLDMTQQSVG
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 1 LLDMTQQSVG 10
LLD TQQS G
Sbjct: 48 LLDDTQQSQG 57
>sp|M22_HRSVB|PROTEIN M2-2|Human respiratory syncytial virus B
Query: 1 LLDMTQQ 7
LLD TQQ
Sbjct: 65 LLDATQQ 71
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 LLDMTQQSVG 10
LLD+TQ V
Sbjct: 849 LLDITQLQVA 858
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 LLDMTQQSVG 10
LLD+TQ V
Sbjct: 849 LLDITQLQVA 858
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 LLDMTQQSV 9
+LD+TQ V
Sbjct: 438 ILDLTQSRV 446
106|SequenceR|535|526|QSIINLLDMT
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 IINLLD 8
I+NLLD
Sbjct: 982 IVNLLD 987
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 2 SIINLLD 8
SI+NLL+
Sbjct: 103 SIVNLLE 109
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 2 SIINLLD 8
SI+NLL+
Sbjct: 103 SIVNLLE 109
>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3
Query: 2 SIINLLD 8
SI+NLL+
Sbjct: 103 SIVNLLE 109
107|SequenceR|540|531|FFLLFQSIIN
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 3 LLFQSIIN 10
L+FQS+I+
Sbjct: 529 LMFQSVID 536
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 LLFQSIIN 10
++FQ++IN
Sbjct: 1313 IIFQNVIN 1320
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 LLFQSIIN 10
++FQ++IN
Sbjct: 1313 IIFQNVIN 1320
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 4 LFQSIIN 10
LFQ+++N
Sbjct: 1449 LFQTLVN 1455
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 LFQSIIN 10
LFQ+++N
Sbjct: 1449 LFQTLVN 1455
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 LFQSIIN 10
LFQ+++N
Sbjct: 1449 LFQTLVN 1455
108|SequenceR|545|536|TVCSKFFLLF
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 VCSKFFLL 9
+CSKF+LL
Sbjct: 572 ICSKFYLL 579
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 1 TVCSKFFLLF 10
TVC+ F+LF
Sbjct: 8 TVCAILFILF 17
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 1 TVCSKFFLLF 10
TVC+ F+LF
Sbjct: 8 TVCAILFILF 17
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VCSKFFLLF 10
+CS +LLF
Sbjct: 150 ICSALYLLF 158
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VCSKFFLLF 10
+CS +LLF
Sbjct: 150 ICSALYLLF 158
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 TVCSKFFLLF 10
T+CS FL++
Sbjct: 783 TMCSYDFLIY 792
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 TVCSKFFLLF 10
T+CS FL++
Sbjct: 783 TMCSYDFLIY 792
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 TVCSKFFLLF 10
T+CS FL++
Sbjct: 782 TMCSYDFLIY 791
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 TVCSKFFLLF 10
T+CS FL++
Sbjct: 782 TMCSYDFLIY 791
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 TVCSKFFLLF 10
T+CS FL++
Sbjct: 782 TMCSYDFLIY 791
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 TVCSKFFLLF 10
T+CS FL++
Sbjct: 782 TMCSYDFLIY 791
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 TVCSKFFLLF 10
T+CS FL++
Sbjct: 782 TMCSYDFLIY 791
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 TVCSKFFLLF 10
T+CS FL++
Sbjct: 782 TMCSYDFLIY 791
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 TVCSKFFLLF 10
T+CS FL++
Sbjct: 782 TMCSYDFLIY 791
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 2 VCSKFFLL 9
+C K+F+L
Sbjct: 506 ICIKYFIL 513
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 TVCSKFFLLF 10
T+CS FL++
Sbjct: 782 TMCSYDFLIY 791
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 TVCSKFFLLF 10
T+CS FL++
Sbjct: 782 TMCSYDFLIY 791
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 TVCSKFFLLF 10
T+CS FL++
Sbjct: 782 TMCSYDFLIY 791
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VCSKFFLL 9
+C K+F+L
Sbjct: 510 ICIKYFIL 517
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 VCSKFF 7
+C KFF
Sbjct: 1064 ICIKFF 1069
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 VCSKFF 7
+C KFF
Sbjct: 1064 ICIKFF 1069
109|SequenceR|550|541|FLLVPTVCSK
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 LVPTVCSK 10
L+P CSK
Sbjct: 1485 LIPNACSK 1492
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 FLLVPTVC 8
F L PTVC
Sbjct: 578 FRLTPTVC 585
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 LVPTVCSK 10
L+P CSK
Sbjct: 1488 LIPDACSK 1495
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 FLLVPT 6
FLLVPT
Sbjct: 1810 FLLVPT 1815
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LLVPTVC 8
L+VPT+C
Sbjct: 85 LMVPTIC 91
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LLVPTVC 8
L+VPT+C
Sbjct: 85 LMVPTIC 91
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 5 PTVCS 9
PTVCS
Sbjct: 7 PTVCS 11
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 4 VPTVCSK 10
+P+VCS+
Sbjct: 156 LPSVCSQ 162
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 4 VPTVC 8
+PT+C
Sbjct: 358 IPTIC 362
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 4 VPTVC 8
+PT+C
Sbjct: 358 IPTIC 362
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 4 VPTVC 8
+PT+C
Sbjct: 358 IPTIC 362
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 4 VPTVC 8
+PT+C
Sbjct: 358 IPTIC 362
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 4 VPTVC 8
+PT+C
Sbjct: 358 IPTIC 362
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 4 VPTVC 8
+PT+C
Sbjct: 358 IPTIC 362
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 FLLVPTVCSK 10
FL+ PTV S+
Sbjct: 214 FLVPPTVESR 223
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 PTVCSK 10
PTVCS
Sbjct: 7 PTVCSN 12
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 FLLVPTV 7
FL+ PTV
Sbjct: 29 FLVTPTV 35
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 LLVPTVC 8
LL+P++C
Sbjct: 11 LLIPSLC 17
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 1 FLLVPTVCSK 10
+L PT C K
Sbjct: 102 YLTAPTGCIK 111
110|SequenceR|555|546|PKCLCFLLVP
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 2 KCLCFLL 8
KCLC LL
Sbjct: 278 KCLCTLL 284
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PKCL--CFLLVP 10
P C CF LVP
Sbjct: 137 PLCFGWCFKLVP 148
>sp|NEF_HV1SC|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PKCL--CFLLVP 10
P C CF LVP
Sbjct: 136 PLCFGWCFKLVP 147
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 3 CLCFLL 8
CLC LL
Sbjct: 283 CLCMLL 288
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 PKCLCFLL 8
P C+ FLL
Sbjct: 228 PSCIQFLL 235
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 PKCLCFLL 8
P C+ FLL
Sbjct: 238 PSCIQFLL 245
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 KCLCF 6
KC CF
Sbjct: 567 KCFCF 571
>sp|NEF_HV1OY|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PKCL--CFLLVP 10
P C CF LVP
Sbjct: 141 PLCFGWCFKLVP 152
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PKCL--CFLLVP 10
P C CF LVP
Sbjct: 136 PLCFGWCFKLVP 147
>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 148 CFKLVP 153
>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 151 CFKLVP 156
>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 142 CFKLVP 147
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 143 CFKLVP 148
>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 141 CFKLVP 146
>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 144 CFKLVP 149
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 144 CFKLVP 149
>sp|NEF_HV1MP|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 137 CFKLVP 142
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 144 CFKLVP 149
>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 137 CFKLVP 142
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 152 CFKLVP 157
>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 154 CFKLVP 159
>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 146 CFKLVP 151
>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 145 CFKLVP 150
>sp|NEF_HV190|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 143 CFKLVP 148
>sp|NEF_HV1V9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 143 CFKLVP 148
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 143 CFKLVP 148
>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 140 CFKLVP 145
>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 148 CFELVP 153
>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 143 CFQLVP 148
>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 142 CFKLVP 147
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 LCFLLVP 10
+C+LL+P
Sbjct: 225 ICYLLMP 231
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 4 LCFLLVP 10
+C+LL+P
Sbjct: 225 ICYLLMP 231
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 3 CLCFLLV 9
C CF+LV
Sbjct: 329 CGCFMLV 335
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 LCFLLVP 10
+C+LL+P
Sbjct: 225 ICYLLMP 231
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 3 CLCFLLV 9
C CF+LV
Sbjct: 330 CGCFMLV 336
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PKCLCF 6
P C+C+
Sbjct: 632 PICMCY 637
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PKCLCF 6
P C+C+
Sbjct: 632 PICMCY 637
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PKCLCF 6
P C+C+
Sbjct: 632 PICMCY 637
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 PKCLCFLL 8
P C+ FL+
Sbjct: 238 PSCIQFLI 245
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 4 LCFLLVP 10
+C++L+P
Sbjct: 228 ICYVLIP 234
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 CFLLVP 10
CF LVP
Sbjct: 143 CFKLVP 148
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 2 KCLCFLLV 9
+C C LL+
Sbjct: 8 RCYCNLLI 15
111|SequenceR|560|551|FARSFPKCLC
>sp|PAX_I77AD|PROTEIN PA-X|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 4 SFPKCL 9
SFPKCL
Sbjct: 245 SFPKCL 250
>sp|PAX_I67A2|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 SFPKCL 9
SFPKCL
Sbjct: 245 SFPKCL 250
>sp|PAX_I61A1|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 SFPKCL 9
SFPKCL
Sbjct: 245 SFPKCL 250
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 FARSFPKCLC 10
F+RS+ K LC
Sbjct: 808 FSRSYLKLLC 817
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 3 RSFPKCL 9
R+FP CL
Sbjct: 539 RAFPHCL 545
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 3 RSFPKCL 9
R+FP CL
Sbjct: 539 RAFPHCL 545
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 RSFPKCL 9
R+FP CL
Sbjct: 539 RAFPHCL 545
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 160 RKFPRC 165
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RDFPRC 135
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 131 RGFPRC 136
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 131 RGFPRC 136
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 131 RGFPRC 136
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 3 RSFPKCL 9
R+FP CL
Sbjct: 541 RAFPHCL 547
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 3 RSFPKCL 9
R+FP CL
Sbjct: 539 RAFPHCL 545
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 RSFPKCL 9
R+FP CL
Sbjct: 539 RAFPHCL 545
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 RSFPKCL 9
R+FP CL
Sbjct: 539 RAFPHCL 545
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 RSFPKCL 9
R+FP CL
Sbjct: 539 RAFPHCL 545
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 3 RSFPKC 8
R FP+C
Sbjct: 131 RGFPRC 136
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 131 RGFPRC 136
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 528 RAFPHCLA 535
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 3 RSFPKC 8
R+FP C
Sbjct: 737 RAFPTC 742
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 3 RSFPKC 8
R+FP C
Sbjct: 742 RAFPTC 747
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RGFPRC 135
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 528 RAFPHCLA 535
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 528 RAFPHCLA 535
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 538 RAFPHCLA 545
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 528 RAFPHCLA 535
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 541 RAFPHCLA 548
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 534 RAFPHCLA 541
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 541 RAFPHCLA 548
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 538 RAFPHCLA 545
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 538 RAFPHCLA 545
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 534 RAFPHCLA 541
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 541 RAFPHCLA 548
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 534 RAFPHCLA 541
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 538 RAFPHCLA 545
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 538 RAFPHCLA 545
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 528 RAFPHCLA 535
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 528 RAFPHCLA 535
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 528 RAFPHCLA 535
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 538 RAFPHCLA 545
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 541 RAFPHCLA 548
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 539 RAFPHCLA 546
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 RSFPKCLC 10
R+FP CL
Sbjct: 541 RAFPHCLA 548
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 131 RGFPRC 136
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 131 RGFPRC 136
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 3 RSFPKC 8
R FP+C
Sbjct: 131 RGFPRC 136
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 3 RSFPKC 8
R FP+C
Sbjct: 130 RDFPRC 135
>sp|UL126_HCMVA|UNCHARACTERIZED protein UL126|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RSFPKC 8
R FPKC
Sbjct: 26 RDFPKC 31
>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain
Query: 1 FARSFPKCLC 10
F FPK LC
Sbjct: 309 FQSFFPKTLC 318
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 RSFPK 7
RSFPK
Sbjct: 1970 RSFPK 1974
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 SFPKCLC 10
S P C+C
Sbjct: 630 SLPICMC 636
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 SFPKCLC 10
S P C+C
Sbjct: 630 SLPICMC 636
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 SFPKCLC 10
S P C+C
Sbjct: 630 SLPICMC 636
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 5 FPKC 8
FPKC
Sbjct: 306 FPKC 309
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 5 FPKC 8
FPKC
Sbjct: 307 FPKC 310
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 5 FPKC 8
FPKC
Sbjct: 307 FPKC 310
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 5 FPKC 8
FPKC
Sbjct: 307 FPKC 310
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 5 FPKC 8
FPKC
Sbjct: 309 FPKC 312
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 ARSFPKCLC 10
ARS C C
Sbjct: 1119 ARSLTPCTC 1127
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 ARSFPKCLC 10
ARS C C
Sbjct: 1122 ARSLAPCTC 1130
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 ARSFPKCLC 10
ARS C C
Sbjct: 1117 ARSLTPCTC 1125
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 ARSFPKCLC 10
ARS C C
Sbjct: 1117 ARSLTPCTC 1125
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ARSFPKCLC 10
ARS C C
Sbjct: 1117 ARSLTPCTC 1125
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ARSFPKCLC 10
ARS C C
Sbjct: 1117 ARSLTPCTC 1125
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ARSFPKCLC 10
ARS C C
Sbjct: 1117 ARSLTPCTC 1125
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ARSFPKCLC 10
ARS C C
Sbjct: 1117 ARSLTPCTC 1125
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 ARSFPKCLC 10
ARS C C
Sbjct: 1122 ARSLTPCTC 1130
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ARSFPKCLC 10
ARS C C
Sbjct: 1117 ARSLTPCTC 1125
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ARSFPKCLC 10
ARS C C
Sbjct: 1117 ARSMTPCTC 1125
>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 5 FPKCLC 10
FP C C
Sbjct: 308 FPSCCC 313
>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 5 FPKCLC 10
FP C C
Sbjct: 297 FPSCCC 302
>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 5 FPKCLC 10
FP C C
Sbjct: 297 FPSCCC 302
>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 5 FPKCLC 10
FP C C
Sbjct: 308 FPSCCC 313
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 5 FPKCLC 10
FP C C
Sbjct: 308 FPSCCC 313
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 5 FPKCLC 10
FP C C
Sbjct: 307 FPSCCC 312
>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 FPKCLC 10
FP C C
Sbjct: 297 FPSCCC 302
>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 5 FPKCLC 10
FP C C
Sbjct: 308 FPSCCC 313
>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 5 FPKCLC 10
FP C C
Sbjct: 308 FPSCCC 313
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 5 FPKCLC 10
FP C C
Sbjct: 307 FPSCCC 312
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 5 FPKCLC 10
FP C C
Sbjct: 307 FPSCCC 312
>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 5 FPKCLC 10
FP C C
Sbjct: 308 FPSCCC 313
>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 5 FPKCLC 10
FP C C
Sbjct: 308 FPSCCC 313
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 RSFPKCLC 10
RS+ C C
Sbjct: 1122 RSYTPCTC 1129
112|SequenceR|565|556|CCCEMFARSF
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 CCCEMFA 7
CCC +FA
Sbjct: 469 CCCAVFA 475
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 1 CCCEMFA 7
CCC +FA
Sbjct: 469 CCCAVFA 475
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 CCCEMFA 7
CCC +FA
Sbjct: 471 CCCAVFA 477
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 CCEMFARS 9
CC F+RS
Sbjct: 1435 CCTEFSRS 1442
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 3 CEMFARS 9
C++FARS
Sbjct: 171 CDLFARS 177
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 CCCEMFAR 8
CC +AR
Sbjct: 301 CCTSQYAR 308
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 CCCEMF 6
C CE+F
Sbjct: 224 CGCEVF 229
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 3 CEMFARS 9
C++F RS
Sbjct: 208 CDIFTRS 214
113|SequenceR|570|561|EECCCCCCEM
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 ECCCCCCEM 10
E CC CE+
Sbjct: 1087 EWCCRACEL 1095
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 CCCC 6
CCCC
Sbjct: 3766 CCCC 3769
Query: 4 CCCC 7
CCCC
Sbjct: 3766 CCCC 3769
Query: 5 CCCC 8
CCCC
Sbjct: 3766 CCCC 3769
Query: 3 CCCCC 7
CC CC
Sbjct: 5327 CCKCC 5331
Query: 4 CCCCC 8
CC CC
Sbjct: 5327 CCKCC 5331
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 ECCCCCCEM 10
E CC CE+
Sbjct: 1087 EWCCRTCEL 1095
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 ECCCCCCEM 10
E CC CE+
Sbjct: 1089 EWCCRTCEL 1097
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 ECCCCCCEM 10
E CC CE+
Sbjct: 1089 EWCCRTCEL 1097
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 ECCCCCC 8
+C CC C
Sbjct: 1651 KCGCCIC 1657
Query: 4 CCCCCE 9
CC C E
Sbjct: 1654 CCICLE 1659
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 CCCC 6
CCCC
Sbjct: 3766 CCCC 3769
Query: 4 CCCC 7
CCCC
Sbjct: 3766 CCCC 3769
Query: 5 CCCC 8
CCCC
Sbjct: 3766 CCCC 3769
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 EECCCCCCEM 10
EE CC C M
Sbjct: 1103 EEWCCRECTM 1112
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 EECCCCCCEM 10
EE CC C M
Sbjct: 1103 EEWCCRECTM 1112
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 EECCCCCCEM 10
EE CC C M
Sbjct: 1099 EEWCCRECTM 1108
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 3 CCCCC 7
CC CC
Sbjct: 1323 CCGCC 1327
Query: 4 CCCCC 8
CC CC
Sbjct: 1323 CCGCC 1327
Query: 3 CCCCCC 8
C CC C
Sbjct: 1324 CGCCNC 1329
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 EECCC 5
E CCC
Sbjct: 467 ERCCC 471
Query: 2 ECCCC 6
E CCC
Sbjct: 467 ERCCC 471
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 3 CCCCC 7
CC CC
Sbjct: 786 CCSCC 790
Query: 4 CCCCC 8
CC CC
Sbjct: 786 CCSCC 790
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 CCCCC 7
CC CC
Sbjct: 786 CCSCC 790
Query: 4 CCCCC 8
CC CC
Sbjct: 786 CCSCC 790
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 1 EECCC 5
E CCC
Sbjct: 467 ERCCC 471
Query: 2 ECCCC 6
E CCC
Sbjct: 467 ERCCC 471
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1087 EWCCRACTM 1095
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1087 EWCCRACTM 1095
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1087 EWCCRACTM 1095
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1087 EWCCRACTM 1095
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1088 EWCCRSCTM 1096
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1088 EWCCRSCTM 1096
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1088 EWCCRSCTM 1096
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1088 EWCCRSCTM 1096
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1088 EWCCRSCTM 1096
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1088 EWCCRSCTM 1096
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1088 EWCCRSCTM 1096
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1088 EWCCRSCTM 1096
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1088 EWCCRSCTM 1096
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1081 EWCCRSCTM 1089
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1096 EWCCRSCTM 1104
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 CCCCC 7
CC CC
Sbjct: 5350 CCKCC 5354
Query: 4 CCCCC 8
CC CC
Sbjct: 5350 CCKCC 5354
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 CCCCC 7
CC CC
Sbjct: 5336 CCKCC 5340
Query: 4 CCCCC 8
CC CC
Sbjct: 5336 CCKCC 5340
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 3 CCCCC 7
CC CC
Sbjct: 786 CCSCC 790
Query: 4 CCCCC 8
CC CC
Sbjct: 786 CCSCC 790
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 EECCCCCCEM 10
E+C CC +
Sbjct: 685 EQCYAKCCNL 694
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 EECCCCCCEM 10
E+C CC +
Sbjct: 685 EQCYAKCCNL 694
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 EECCCCCCEM 10
E+C CC +
Sbjct: 685 EQCYAKCCNL 694
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 EECCCCCCEM 10
E+C CC +
Sbjct: 685 EQCYAKCCNL 694
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 EECCC 5
E CCC
Sbjct: 469 ERCCC 473
Query: 2 ECCCC 6
E CCC
Sbjct: 469 ERCCC 473
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 ECCCCCCEM 10
E CC C M
Sbjct: 1088 EWCCRSCTM 1096
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 5 CCCCEM 10
C CC++
Sbjct: 255 CLCCDL 260
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 5 CCCCEM 10
C CC++
Sbjct: 255 CLCCDL 260
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 CCCCC 7
CC CC
Sbjct: 5323 CCKCC 5327
Query: 4 CCCCC 8
CC CC
Sbjct: 5323 CCKCC 5327
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 CCCCC 7
CC CC
Sbjct: 5381 CCKCC 5385
Query: 4 CCCCC 8
CC CC
Sbjct: 5381 CCKCC 5385
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 CCCCC 7
CC CC
Sbjct: 5411 CCKCC 5415
Query: 4 CCCCC 8
CC CC
Sbjct: 5411 CCKCC 5415
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 CCCCC 7
CC CC
Sbjct: 5361 CCKCC 5365
Query: 4 CCCCC 8
CC CC
Sbjct: 5361 CCKCC 5365
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 ECCCCCCE 9
EC CC E
Sbjct: 449 ECSQCCHE 456
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 ECCCC 6
ECC C
Sbjct: 1161 ECCIC 1165
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 ECCCC 6
ECC C
Sbjct: 1161 ECCIC 1165
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 CCCCCEM 10
CC C M
Sbjct: 1086 CCRSCTM 1092
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 CCCCCEM 10
CC C M
Sbjct: 1086 CCRSCTM 1092
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 CCCCCEM 10
CC C M
Sbjct: 1086 CCRSCTM 1092
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 CCCCCEM 10
CC C M
Sbjct: 1086 CCRSCTM 1092
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 CCCCCEM 10
CC C M
Sbjct: 1086 CCRSCTM 1092
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 1 EECCCCCCE 9
+EC CC E
Sbjct: 246 DECRCCYSE 254
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 ECCCCCCEM 10
EC CC ++
Sbjct: 283 ECPMCCSKI 291
114|SequenceR|575|566|SKQICEECCC
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 SKQICEECCC 10
S++ C+E CC
Sbjct: 1375 SEKTCDEECC 1384
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1364 SVKTCDEDCC 1373
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1374 SVKTCDEECC 1383
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1373 SVKTCDEECC 1382
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1371 SVKTCDEECC 1380
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1376 SVKTCDEECC 1385
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1364 SVKTCDEECC 1373
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1363 SVKTCDEECC 1372
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1365 SVKTCDEECC 1374
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1381 SVKTCDEECC 1390
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1363 SVKTCDEECC 1372
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1362 SVKTCDEECC 1371
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1365 SVRTCDEECC 1374
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1383 SVKTCDEECC 1392
>sp|YLR3_EBVP3|UNCHARACTERIZED protein BLRF3|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 3 QICEECCC 10
Q+C+ C C
Sbjct: 119 QVCDVCFC 126
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 SKQICEECCC 10
S + C+E CC
Sbjct: 1373 SVKTCDEECC 1382
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 ICEEC 8
IC+EC
Sbjct: 1314 ICDEC 1318
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 ICEEC 8
IC+EC
Sbjct: 1318 ICDEC 1322
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 SKQICEECCC 10
S + C++ CC
Sbjct: 1365 SVKTCDDECC 1374
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 SKQICEECCC 10
S + C++ CC
Sbjct: 1367 SVKTCDDECC 1376
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 ICEEC 8
IC+EC
Sbjct: 1318 ICDEC 1322
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 1 SKQICEEC 8
S Q CE C
Sbjct: 595 SSQTCEFC 602
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SKQICEEC 8
S Q CE C
Sbjct: 595 SSQTCEFC 602
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 1 SKQICEEC 8
S Q CE C
Sbjct: 595 SSQTCEFC 602
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 4 ICEEC 8
IC+EC
Sbjct: 1319 ICDEC 1323
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 ICEEC 8
IC+EC
Sbjct: 1318 ICDEC 1322
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 ICEEC 8
IC+EC
Sbjct: 1318 ICDEC 1322
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 4 ICEEC 8
IC+EC
Sbjct: 1318 ICDEC 1322
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 ICEEC 8
IC+EC
Sbjct: 1316 ICDEC 1320
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 ICEEC 8
IC+EC
Sbjct: 1322 ICDEC 1326
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 ICEEC 8
IC+EC
Sbjct: 1318 ICDEC 1322
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 SKQICEEC 8
+ Q+C++C
Sbjct: 1397 ATQLCKDC 1404
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 SKQICEEC 8
+ Q+C++C
Sbjct: 1389 ATQLCKDC 1396
>sp|PG045_VARV|APOPTOSIS regulator OPG045|Variola virus
Query: 1 SKQICEEC 8
S IC++C
Sbjct: 185 SHTICDDC 192
>sp|PG045_VACCT|APOPTOSIS regulator OPG045|Vaccinia virus (strain Tian Tan)
Query: 1 SKQICEEC 8
S IC++C
Sbjct: 174 SHTICDDC 181
>sp|PG045_VACCP|APOPTOSIS regulator OPG045|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 SKQICEEC 8
S IC++C
Sbjct: 174 SHTICDDC 181
>sp|PG045_VACCC|APOPTOSIS regulator OPG045|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SKQICEEC 8
S IC++C
Sbjct: 174 SHTICDDC 181
>sp|PG045_VACCA|APOPTOSIS regulator OPG045|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SKQICEEC 8
S IC++C
Sbjct: 170 SHTICDDC 177
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QICEECC 9
Q+C E C
Sbjct: 544 QVCMEIC 550
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 ICEEC 8
IC+EC
Sbjct: 1315 ICDEC 1319
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 ICEEC 8
IC+EC
Sbjct: 1315 ICDEC 1319
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 ICEEC 8
IC+EC
Sbjct: 1312 ICDEC 1316
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 ICEEC 8
IC+EC
Sbjct: 1315 ICDEC 1319
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 ICEEC 8
IC+EC
Sbjct: 1320 ICDEC 1324
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 ICEEC 8
IC+EC
Sbjct: 1314 ICDEC 1318
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 ICEEC 8
IC+EC
Sbjct: 1318 ICDEC 1322
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 ICEEC 8
IC+EC
Sbjct: 1314 ICDEC 1318
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 ICEEC 8
IC+EC
Sbjct: 1319 ICDEC 1323
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ICEEC 8
IC+EC
Sbjct: 1314 ICDEC 1318
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ICEEC 8
IC+EC
Sbjct: 1314 ICDEC 1318
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ICEEC 8
IC+EC
Sbjct: 1314 ICDEC 1318
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ICEEC 8
IC+EC
Sbjct: 1314 ICDEC 1318
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 ICEEC 8
IC+EC
Sbjct: 1318 ICDEC 1322
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 ICEEC 8
IC+EC
Sbjct: 1319 ICDEC 1323
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ICEEC 8
IC+EC
Sbjct: 1314 ICDEC 1318
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ICEEC 8
IC+EC
Sbjct: 1314 ICDEC 1318
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 4 ICEEC 8
ICE C
Sbjct: 1086 ICENC 1090
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 ICEEC 8
ICE C
Sbjct: 1086 ICENC 1090
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 4 ICEEC 8
ICE C
Sbjct: 1086 ICENC 1090
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 4 ICEEC 8
ICE C
Sbjct: 1086 ICENC 1090
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 4 ICEEC 8
ICE C
Sbjct: 1086 ICENC 1090
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 ICEEC 8
IC+EC
Sbjct: 1314 ICDEC 1318
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ICEEC 8
IC+EC
Sbjct: 1314 ICDEC 1318
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 ICEEC 8
IC+EC
Sbjct: 1314 ICDEC 1318
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 2 KQICEECC 9
+ IC CC
Sbjct: 288 RGICTTCC 295
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 KQICEECC 9
+ IC CC
Sbjct: 288 RGICTTCC 295
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 4 ICEECCC 10
+C CC
Sbjct: 180 LCSAACC 186
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 5 CEECCC 10
C E CC
Sbjct: 275 CFEFCC 280
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 5 CEECCC 10
C E CC
Sbjct: 274 CFEFCC 279
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 1 SKQICEE 7
SKQIC E
Sbjct: 193 SKQICGE 199
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 4 ICEECCC 10
+C CC
Sbjct: 180 LCSAACC 186
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 ICEECCC 10
+C CC
Sbjct: 180 LCSAACC 186
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 4 ICEECCC 10
+C CC
Sbjct: 180 LCSAACC 186
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 ICEECCC 10
+C CC
Sbjct: 180 LCSAACC 186
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 CEECC 9
C +CC
Sbjct: 450 CSQCC 454
115|SequenceR|580|571|STVTSSKQIC
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 4 TSSKQIC 10
TSS QIC
Sbjct: 700 TSSIQIC 706
116|SequenceR|585|576|NDNDDSTVTS
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 DNDDSTVTS 10
DNDD ++TS
Sbjct: 576 DNDDESLTS 584
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 5 DSTVTS 10
DSTVTS
Sbjct: 270 DSTVTS 275
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 NDNDDSTVT 9
NDN ST+T
Sbjct: 363 NDNTQSTIT 371
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 5 DSTVTS 10
DSTVTS
Sbjct: 270 DSTVTS 275
>sp|HEMA_VAR67|PROTEIN OPG185|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 NDNDDSTVT 9
NDN+ STV+
Sbjct: 248 NDNEPSTVS 256
117|SequenceR|590|581|ETTYENDNDD
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ETTYENDNDD 10
++TYE D +D
Sbjct: 414 DSTYETDRED 423
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ETTYENDNDD 10
++TYE D +D
Sbjct: 414 DSTYETDRED 423
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 ETTYENDN 8
E TY+NDN
Sbjct: 377 EGTYKNDN 384
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 ETTYENDN 8
ETTY+N N
Sbjct: 352 ETTYKNTN 359
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 ETTYENDN 8
E+TY+N+N
Sbjct: 382 ESTYKNEN 389
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 YENDN 8
YENDN
Sbjct: 637 YENDN 641
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 YENDN 8
YENDN
Sbjct: 637 YENDN 641
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 YENDN 8
YENDN
Sbjct: 637 YENDN 641
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 ETTYENDN 8
E TY+N+N
Sbjct: 381 EATYKNEN 388
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 ETTYENDN 8
++TY+NDN
Sbjct: 350 DSTYKNDN 357
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 ETTYEND 7
+T YEND
Sbjct: 204 KTVYEND 210
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 1 ETTYENDNDD 10
E TY ND+ D
Sbjct: 489 EETYVNDSRD 498
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TYENDND 9
TYE D D
Sbjct: 2738 TYEKDAD 2744
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 1 ETTYENDNDD 10
E Y+ND D+
Sbjct: 118 EVIYDNDKDN 127
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 ETTYENDND 9
+ TYE D D
Sbjct: 2740 KATYETDVD 2748
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 YENDN 8
Y+NDN
Sbjct: 2801 YDNDN 2805
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 YENDN 8
Y+NDN
Sbjct: 2802 YDNDN 2806
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 YENDN 8
Y+NDN
Sbjct: 2801 YDNDN 2805
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 YENDN 8
Y+NDN
Sbjct: 2801 YDNDN 2805
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 YENDN 8
Y+NDN
Sbjct: 2802 YDNDN 2806
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 YENDN 8
Y+NDN
Sbjct: 2801 YDNDN 2805
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 YENDN 8
Y+NDN
Sbjct: 2801 YDNDN 2805
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 YENDN 8
Y+NDN
Sbjct: 2801 YDNDN 2805
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 ETTYENDN 8
++TY+N+N
Sbjct: 351 DSTYKNEN 358
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 ETTYEN 6
+TTYEN
Sbjct: 285 KTTYEN 290
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 ETTYEN 6
ETT+EN
Sbjct: 2098 ETTWEN 2103
118|SequenceR|595|586|PSLELETTYE
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 PSLELETTY 9
P +EL+TTY
Sbjct: 186 PPIELKTTY 194
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 PSLELETTY 9
P +EL+ TY
Sbjct: 186 PPIELKNTY 194
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 PSLELETTY 9
P +EL+ TY
Sbjct: 195 PPIELKNTY 203
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 PSLELETTY 9
P +EL+ TY
Sbjct: 184 PPIELKNTY 192
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 SLELETT 8
SLEL+TT
Sbjct: 618 SLELQTT 624
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 PSLELET 7
PSL LET
Sbjct: 72 PSLSLET 78
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PSLELETT 8
P LE+E T
Sbjct: 1010 PQLEMELT 1017
>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United
Query: 4 ELETTY 9
+LETTY
Sbjct: 147 QLETTY 152
119|SequenceR|600|591|RITSFPSLEL
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 RITSFP 6
R+TSFP
Sbjct: 281 RVTSFP 286
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 RITSFPSLE 9
R+TS+P E
Sbjct: 544 RVTSYPGEE 552
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 4 SFPSLE 9
+FPSLE
Sbjct: 222 NFPSLE 227
120|SequenceR|605|596|TSMERRITSF
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 3 MERRITSF 10
++RRIT+F
Sbjct: 246 IDRRITTF 253
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 3 MERRITSF 10
++RRIT+F
Sbjct: 246 IDRRITTF 253
>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 SMERRITSF 10
S+E+RITS
Sbjct: 106 SLEQRITSL 114
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 SMERRITSF 10
S+E+RITS
Sbjct: 106 SLEQRITSL 114
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 1 TSMERRITSF 10
T M+R +TSF
Sbjct: 156 TLMKRELTSF 165
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 1 TSMERRITSF 10
T M+R +TSF
Sbjct: 156 TLMKRELTSF 165
121|SequenceR|613|601|CHTGVSAFTSMER
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 5 VSAFTSMER 13
VSAFT+M R
Sbjct: 773 VSAFTTMAR 781
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 CHTGVSAF 8
CHT +SAF
Sbjct: 579 CHTALSAF 586
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 CHTGVSAF 8
CHT +SAF
Sbjct: 579 CHTALSAF 586
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGVSAFTSM 11
TG SA+TS+
Sbjct: 217 TGTSAYTSL 225
Query: 3 TGVSAFTSMER 13
TG S FTS+++
Sbjct: 40 TGASYFTSVDQ 50
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGVSAFTSM 11
TG SA+TS+
Sbjct: 217 TGTSAYTSL 225
Query: 3 TGVSAFTSMER 13
TG S FTS+++
Sbjct: 40 TGASYFTSVDQ 50
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGVSAFTSM 11
TG SA+TS+
Sbjct: 217 TGTSAYTSL 225
Query: 3 TGVSAFTSMER 13
TG S FTS+++
Sbjct: 40 TGASYFTSVDQ 50
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGVSAFTSM 11
TG SA+TS+
Sbjct: 217 TGTSAYTSL 225
Query: 3 TGVSAFTSMER 13
TG S FTS+++
Sbjct: 40 TGASYFTSVDQ 50
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGVSAFTSM 11
TG SA+TS+
Sbjct: 217 TGTSAYTSL 225
Query: 3 TGVSAFTSMER 13
TG S FTS+++
Sbjct: 40 TGASYFTSVDQ 50
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGVSAFTSM 11
TG SA+TS+
Sbjct: 217 TGTSAYTSL 225
Query: 3 TGVSAFTSMER 13
TG S FTS+++
Sbjct: 40 TGASYFTSVDQ 50
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGVSAFTSM 11
TG SA+TS+
Sbjct: 217 TGTSAYTSL 225
Query: 3 TGVSAFTSMER 13
TG S FTS+++
Sbjct: 40 TGASYFTSVDQ 50
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGVSAFTSM 11
TG SA+TS+
Sbjct: 217 TGTSAYTSL 225
Query: 3 TGVSAFTSMER 13
TG S FTS+++
Sbjct: 40 TGASYFTSVDQ 50
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGVSAFTSM 11
TG SA+TS+
Sbjct: 217 TGTSAYTSL 225
Query: 3 TGVSAFTSMER 13
TG S FTS+++
Sbjct: 40 TGASYFTSVDQ 50
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGVSAFTSM 11
TG SA+TS+
Sbjct: 217 TGTSAYTSL 225
Query: 3 TGVSAFTSMER 13
TG S FTS+++
Sbjct: 40 TGASYFTSVDQ 50
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGVSAFTSM 11
TG SA+TS+
Sbjct: 196 TGTSAYTSL 204
Query: 3 TGVSAFTSMER 13
TG S FTS+++
Sbjct: 19 TGASYFTSVDQ 29
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGVSAFTSM 11
TG SA+TS+
Sbjct: 217 TGTSAYTSL 225
Query: 3 TGVSAFTSMER 13
TG S FTS+++
Sbjct: 40 TGASYFTSVDQ 50
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 1 CHTGVSAFTSMER 13
CH SAF R
Sbjct: 6 CHQHASAFDQAAR 18
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 1 CHTGVSAFTSMER 13
CH SAF R
Sbjct: 6 CHQHASAFDQAAR 18
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 1 CHTGVSAFTSMER 13
CH SAF R
Sbjct: 6 CHQHASAFDQAAR 18
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 1 CHTGVSAFTSMER 13
CH SAF R
Sbjct: 6 CHQHASAFDQAAR 18
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 CHTGVSAFT 9
CH GVS T
Sbjct: 181 CHDGVSRMT 189
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3097 GLNTFTNME 3105
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3097 GLNTFTNME 3105
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3097 GLNTFTNME 3105
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3099 GLNTFTNME 3107
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3099 GLNTFTNME 3107
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3097 GLNTFTNME 3105
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3097 GLNTFTNME 3105
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3099 GLNTFTNME 3107
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3099 GLNTFTNME 3107
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 4 GVSAFTSME 12
GVS F S+E
Sbjct: 266 GVSGFGSLE 274
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 4 GVSAFTSME 12
GVS F S+E
Sbjct: 266 GVSGFGSLE 274
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3099 GLNTFTNME 3107
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3095 GLNTFTNME 3103
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3095 GLNTFTNME 3103
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3099 GLNTFTNME 3107
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3100 GLNTFTNME 3108
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3096 GLNTFTNME 3104
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3095 GLNTFTNME 3103
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3099 GLNTFTNME 3107
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3095 GLNTFTNME 3103
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3100 GLNTFTNME 3108
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 GVSAFTSME 12
G++ FT+ME
Sbjct: 3095 GLNTFTNME 3103
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 1 CHTGVSAFT 9
CH G+S T
Sbjct: 165 CHDGISWLT 173
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 3 TGVSAFTSMER 13
TG+S+F + R
Sbjct: 281 TGISSFRILRR 291
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 TGVSAFTSMER 13
TG+S+F + R
Sbjct: 281 TGISSFRILRR 291
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TGVSAFTSMER 13
TG+S+F + R
Sbjct: 281 TGISSFRILRR 291
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 3 TGVSAFTSMER 13
TG+S+F + R
Sbjct: 281 TGISSFRILRR 291
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 3 TGVSAFTSMER 13
TG+S+F + R
Sbjct: 281 TGISSFRILRR 291
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 CHTGVSAFT 9
CH G+S T
Sbjct: 165 CHDGISWLT 173
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 3 TGVSAFTSM 11
TG+ FTSM
Sbjct: 486 TGMFEFTSM 494
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 3 TGVSAFTSM 11
TG+ FTSM
Sbjct: 486 TGMFEFTSM 494
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 3 TGVSAFTSM 11
TG+ FTSM
Sbjct: 486 TGMFEFTSM 494
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 3 TGVSAFTSM 11
TG+ FTSM
Sbjct: 486 TGMFEFTSM 494
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 2 HTGVSAF 8
HTG+S F
Sbjct: 278 HTGLSRF 284
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 HTGVSAFT 9
+TG SAFT
Sbjct: 435 NTGKSAFT 442
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 2 HTGVSAFT 9
+TG SAFT
Sbjct: 438 NTGKSAFT 445
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 HTGVSAFT 9
+TG SAFT
Sbjct: 434 NTGKSAFT 441
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 HTGVSAFT 9
+TG SAFT
Sbjct: 436 NTGKSAFT 443
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 2 HTGVSAFT 9
+TG SAFT
Sbjct: 436 NTGKSAFT 443
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 HTGVSAFT 9
+TG SAFT
Sbjct: 435 NTGKSAFT 442
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 CHTGVSAFT 9
CH GV+ T
Sbjct: 181 CHDGVNRMT 189
THE END