GGYF2_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|FNLTQTEAAM

>sp|Y1448_METMA|UPF0251 protein MM_1448|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NLTQTEAA 9
NL+QTEAA
Sbjct: 48 NLSQTEAA 55




2|SequenceR|15|6|LWEPGFNLTQ

>sp|AMZA_PYRHO|ARCHAEMETZINCIN horikoshii (strain ATCC 700860

Query: 1 LWEPGFNL 8
++EPGFN
Sbjct: 87 IYEPGFNF 94


>sp|Y667_METM6|UPF0248 protein MmarC6_0667|Methanococcus maripaludis (strain C6 /

Query: 1 LWEPGFN 7
LW PG+N
Sbjct: 10 LWHPGYN 16


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PGFNLTQ 10
PGF+LTQ
Sbjct: 60 PGFSLTQ 66


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LWEPGF 6
LWEP F
Sbjct: 437 LWEPAF 442


>sp|RL6_METBU|LARGE ribosomal subunit protein uL6|Methanococcoides burtonii (strain

Query: 1 LWEPGFNL 8
LW PG N+
Sbjct: 37 LWYPGVNI 44


>sp|RPO3_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermococcus kodakarensis (strain ATCC

Query: 2 WEPGF 6
W+PGF
Sbjct: 146 WQPGF 150


>sp|R15PI_PYRAB|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 LWEPGFNLT 9
+W P F++T
Sbjct: 276 VWNPAFDVT 284


>sp|RPO3_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus horikoshii (strain ATCC

Query: 2 WEPGF 6
W+PGF
Sbjct: 146 WQPGF 150


>sp|R15PI_PYRHO|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus horikoshii (strain ATCC

Query: 1 LWEPGFNLT 9
+W P F++T
Sbjct: 276 VWNPAFDVT 284


>sp|RPO3_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus abyssi (strain GE5 /

Query: 2 WEPGF 6
W+PGF
Sbjct: 146 WQPGF 150


>sp|Y1017_METAC|UPF0251 protein MA_1017|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LWEPGFN 7
+WEP F+
Sbjct: 111 MWEPKFD 117


>sp|RPO3_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WEPGF 6
W+PGF
Sbjct: 148 WQPGF 152


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LWEPGF 6
LWEP F
Sbjct: 437 LWEPEF 442


>sp|R15PI_THEKO|RIBOSE 1,5-bisphosphate isomerase|Thermococcus kodakarensis (strain ATCC

Query: 1 LWEPGFNLT 9
+W P F++T
Sbjct: 274 VWNPAFDVT 282


>sp|PYRK_PYRAB|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus abyssi

Query: 1 LWEPGFN 7
LW PG N
Sbjct: 36 LWLPGIN 42


>sp|HJC_METTH|CROSSOVER junction endodeoxyribonuclease Hjc|Methanothermobacter

Query: 1 LWEPGF 6
LWE GF
Sbjct: 16 LWEKGF 21


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 LWEPGF 6
LW+P F
Sbjct: 435 LWDPAF 440


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 4 PGFNLTQ 10
PG+ LTQ
Sbjct: 337 PGYGLTQ 343


>sp|RL6_METHJ|LARGE ribosomal subunit protein uL6|Methanospirillum hungatei JF-1

Query: 1 LWEPGFNLT 9
+W PG +T
Sbjct: 35 MWYPGIEIT 43


>sp|DUT_AERPE|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Aeropyrum pernix

Query: 1 LWEPGF 6
+W+PG+
Sbjct: 105 VWDPGY 110


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 LWEPGFNLT 9
+W+ FNLT
Sbjct: 332 IWKDKFNLT 340


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LWEPGFNLTQ 10
LW+ GF Q
Sbjct: 147 LWDNGFTQVQ 156




3|SequenceR|20|11|SSLARLWEPG

>sp|FLPA_METHJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanospirillum hungatei JF-1

Query: 5 RLWEPG 10
R+W+PG
Sbjct: 25 RIWDPG 30


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 3 LARLWEPG 10
+AR WE G
Sbjct: 295 IARAWESG 302


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 ARLWEPG 10
A LW+PG
Sbjct: 207 ACLWKPG 213


>sp|UDP_THEKO|URIDINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 RLWEPG 10
R+W PG
Sbjct: 269 RVWHPG 274


>sp|SYTE_AERPE|THREONINE--TRNA ligase editing subunit|Aeropyrum pernix (strain ATCC 700893

Query: 5 RLWEPG 10
R WEPG
Sbjct: 386 RRWEPG 391




4|SequenceR|25|16|TISGGSSLAR

>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 3 SGGSSLAR 10
SGGS LAR
Sbjct: 349 SGGSPLAR 356


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ISGGSSLA 9
ISGG SLA
Sbjct: 451 ISGGDSLA 458


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 2 ISGGSSLAR 10
ISGGSS +R
Sbjct: 43 ISGGSSGSR 51


>sp|PYRH_STAMF|URIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 2 ISGGSSLAR 10
I+GG LAR
Sbjct: 40 ITGGGGLAR 48




5|SequenceR|30|21|SLPPSTISGG

>sp|BIOF_META3|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus aeolicus (strain ATCC

Query: 1 SLPPSTISG 9
SLPPS +SG
Sbjct: 262 SLPPSVVSG 270


>sp|IF2A_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 LPPSTISG 9
LPP+ ISG
Sbjct: 172 LPPTKISG 179


>sp|PRNK_PYRHO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PH0197|Pyrococcus horikoshii (strain ATCC

Query: 2 LPPSTIS 8
LPP+TIS
Sbjct: 80 LPPATIS 86


>sp|PRNK_PYRFU|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PF0112|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LPPSTIS 8
LPP+TIS
Sbjct: 73 LPPATIS 79


>sp|PRNK_PYRAB|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PYRAB01840|Pyrococcus abyssi (strain GE5 /

Query: 2 LPPSTIS 8
LPP+TIS
Sbjct: 73 LPPATIS 79


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 2 LPPSTIS 8
LPP+TIS
Sbjct: 76 LPPATIS 82


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PPSTISG 9
PP T+SG
Sbjct: 38 PPPTVSG 44


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PPSTISG 9
PP T+SG
Sbjct: 38 PPPTVSG 44


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 PPSTISG 9
PP T+SG
Sbjct: 35 PPPTVSG 41


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PPSTISG 9
PP T+SG
Sbjct: 70 PPPTVSG 76


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 2 LPPSTISGG 10
LP T+SGG
Sbjct: 900 LPVETLSGG 908


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SLPPSTISGG 10
+LP + +SGG
Sbjct: 303 NLPTAVVSGG 312


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 2 LPPSTIS 8
LPP TIS
Sbjct: 71 LPPGTIS 77


>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 SLPPSTISG 9
S+PP+ I+G
Sbjct: 209 SVPPNCITG 217


>sp|CYAS_METMA|CYSTEATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PPSTISGG 10
PP +I+GG
Sbjct: 309 PPYSITGG 316


>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPSTISGG 10
PP T+ GG
Sbjct: 120 PPGTLEGG 127




6|SequenceR|35|26|KPLAPSLPPS

>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KPLAPSL 7
KPLAPS+
Sbjct: 47 KPLAPSV 53


>sp|Y002_METMP|UPF0425 pyridoxal phosphate-dependent protein MMP0002|Methanococcus

Query: 1 KPLAPSLPPS 10
KP PS+P S
Sbjct: 110 KPAHPSIPRS 119


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 KPLAPSLP 8
KP+AP LP
Sbjct: 280 KPMAPGLP 287


>sp|Y1096_ARCFU|UNCHARACTERIZED protein AF_1096|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LAPSLPPS 10
+AP+ PPS
Sbjct: 41 VAPAAPPS 48


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 1 KPLAPSL 7
KP+APSL
Sbjct: 131 KPIAPSL 137


>sp|IF1A_META3|TRANSLATION initiation factor 1A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KPLAPSLP 8
KP+AP P
Sbjct: 4 KPMAPQQP 11


>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 LAPSLPPS 10
LAPS+PP+
Sbjct: 206 LAPSVPPN 213




7|SequenceR|40|31|DALKYKPLAP

>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 DALKYKPLAP 10
D L+Y PL P
Sbjct: 338 DGLRYTPLTP 347


>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 1 DALKYKPLAP 10
D Y+PLAP
Sbjct: 298 DPSTYEPLAP 307


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 DALKYKPLAP 10
+ L+Y PLAP
Sbjct: 341 EGLRYIPLAP 350


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 DALKYKPL 8
DALK KPL
Sbjct: 40 DALKNKPL 47


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 4 KYKPLAP 10
KYK LAP
Sbjct: 214 KYKSLAP 220


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 DALKYKPLAP 10
DAL ++P+ P
Sbjct: 598 DALFFEPVTP 607


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 3 LKYKPL 8
LKYKPL
Sbjct: 368 LKYKPL 373


>sp|DNLI_METST|DNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DALKYKPL 8
+ LKYKPL
Sbjct: 421 NMLKYKPL 428


>sp|PIMT_METJA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ALKYKPLAP 10
L Y+PLAP
Sbjct: 138 TLGYEPLAP 146


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 ALKYKPLAP 10
L+Y PL P
Sbjct: 339 GLRYTPLTP 347


>sp|LEUD2_PYRFU|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DALKYKPL 8
+ LK+KPL
Sbjct: 131 EVLKFKPL 138


>sp|HTPX_PYRAB|PROTEASE HtpX homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 DALKYKPL 8
+A++Y+PL
Sbjct: 233 EAIRYRPL 240


>sp|PIMT1_ARCFU|PROTEIN-L-ISOASPARTATE O-methyltransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ALKYKPLAP 10
+L Y+P+AP
Sbjct: 137 SLGYEPMAP 145


>sp|RS4_METM7|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain C7

Query: 1 DALKYKPLAP 10
DA++Y P +P
Sbjct: 151 DAIEYVPNSP 160


>sp|Y1113_METJA|PUTATIVE glycosyltransferase MJ1113|Methanocaldococcus jannaschii (strain

Query: 3 LKYKPL 8
LKYKP+
Sbjct: 269 LKYKPM 274


>sp|RS4_METM5|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain C5

Query: 1 DALKYKPLAP 10
DA++Y P +P
Sbjct: 151 DAIEYVPNSP 160


>sp|RS4_METM6|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain C6

Query: 1 DALKYKPLAP 10
DA++Y P +P
Sbjct: 151 DAIEYVPNSP 160




8|SequenceR|45|36|RGYRYDALKY

>sp|MPTN_METJA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YRYDALKY 10
+R+D LKY
Sbjct: 70 FRFDVLKY 77


>sp|RCE1_METMP|CAAX prenyl protease 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 RGYRYDALK 9
RGY +D+L+
Sbjct: 145 RGYAFDSLQ 153


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 1 RGYRYDAL 8
RGY YD +
Sbjct: 166 RGYAYDVM 173


>sp|MPTN_METMP|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 YRYDALKY 10
+R+D LKY
Sbjct: 72 HRFDMLKY 79


>sp|Y800_METJA|UNCHARACTERIZED protein MJ0800|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GYRYDALK 9
GYRY +K
Sbjct: 407 GYRYKKMK 414


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 YRYDALKY 10
+RYDA+ Y
Sbjct: 368 HRYDAVPY 375


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 1 RGYRYD 6
RGY YD
Sbjct: 166 RGYAYD 171


>sp|OFOB_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Saccharolobus solfataricus (Sulfolobus

Query: 1 RGYRYD 6
RGY YD
Sbjct: 166 RGYAYD 171


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 1 RGYRYD 6
RGY YD
Sbjct: 166 RGYAYD 171


>sp|HEM1_PICTO|GLUTAMYL-TRNA reductase|Picrophilus torridus (strain ATCC 700027

Query: 2 GYRYDALK 9
GY YD++K
Sbjct: 209 GYSYDSIK 216


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 RGYRYDALKY 10
RGYR L Y
Sbjct: 572 RGYRVAILNY 581


>sp|RL6_DESA1|LARGE ribosomal subunit protein uL6|Desulfurococcus amylolyticus

Query: 1 RGYRY 5
RGYRY
Sbjct: 85 RGYRY 89




9|SequenceR|50|41|ALMEERGYRY

>sp|MTQ2_ARCFU|RELEASE factor glutamine methyltransferase Mtq2|Archaeoglobus fulgidus

Query: 2 LMEERGYRY 10
L++ERG+RY
Sbjct: 148 LIDERGFRY 156


>sp|NNR_METJA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanocaldococcus jannaschii

Query: 2 LMEERGYRY 10
L++E+GY Y
Sbjct: 466 LLKEKGYYY 474


>sp|NIKR_METM7|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain C7

Query: 2 LMEERGY 8
++EERGY
Sbjct: 22 IIEERGY 28


>sp|NIKR_METM6|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain C6

Query: 2 LMEERGY 8
++EERGY
Sbjct: 22 IIEERGY 28


>sp|NIKR_METM5|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain C5

Query: 2 LMEERGY 8
++EERGY
Sbjct: 22 IIEERGY 28


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LMEERGYR 9
L EE GYR
Sbjct: 421 LAEEEGYR 428


>sp|QUEE_HALS3|7-CARBOXY-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LMEERGYRY 10
L E GYRY
Sbjct: 234 LAMEHGYRY 242


>sp|NIKR_METMP|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain DSM

Query: 2 LMEERGY 8
++EERGY
Sbjct: 22 IIEERGY 28


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 MEERGYR 9
M ERGYR
Sbjct: 170 MLERGYR 176


>sp|NIKR_THESM|PUTATIVE nickel-responsive regulator|Thermococcus sibiricus (strain DSM

Query: 2 LMEERGY 8
+MEE+GY
Sbjct: 21 IMEEKGY 27


>sp|GGR2_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LMEERGYR 9
MEERG++
Sbjct: 238 FMEERGFK 245


>sp|PYRB_HYPBU|ASPARTATE carbamoyltransferase catalytic subunit|Hyperthermus butylicus

Query: 2 LMEERGYRY 10
+++ERG RY
Sbjct: 206 VLDERGMRY 214


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ALMEERG 7
ALM+ERG
Sbjct: 1119 ALMKERG 1125


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 ALMEERG 7
ALM+ERG
Sbjct: 1119 ALMKERG 1125


>sp|NADM_METJA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LMEERGY 8
L EERGY
Sbjct: 105 LFEERGY 111


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ALMEERGYR 9
A+ME GYR
Sbjct: 172 AVMEALGYR 180


>sp|SUCC_STAMF|SUCCINATE--COA ligase [ADP-forming] subunit beta|Staphylothermus marinus (strain

Query: 2 LMEERGY 8
L+EE+GY
Sbjct: 351 LLEEKGY 357


>sp|Y639_METJA|UNCHARACTERIZED protein MJ0639|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALMEERGYRY 10
AL+ E GY Y
Sbjct: 57 ALISENGYYY 66


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 4 EERGYRY 10
EE+ YRY
Sbjct: 298 EEKDYRY 304


>sp|RS2_PYRCJ|SMALL ribosomal subunit protein uS2|Pyrobaculum calidifontis (strain

Query: 3 MEERGYRY 10
+EERG+ Y
Sbjct: 32 LEERGFIY 39


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LMEERGY 8
LMEE GY
Sbjct: 222 LMEELGY 228


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 ALMEERGYR 9
A + ERGYR
Sbjct: 70 AALVERGYR 78


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 ALMEERGYR 9
A + ERGYR
Sbjct: 70 AALVERGYR 78




10|SequenceR|55|46|DKLFLALMEE

>sp|ENDA_PYRHO|TRNA-SPLICING endonuclease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DKLFLALME 9
DKLFL+L+E
Sbjct: 37 DKLFLSLIE 45


>sp|IF2B_PYRAR|TRANSLATION initiation factor 2 subunit|Pyrobaculum arsenaticum (strain DSM

Query: 1 DKLFLALME 9
DK +LAL+E
Sbjct: 2 DKEYLALLE 10


>sp|GCH3_METJA|GTP cyclohydrolase III|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKLFLALMEE 10
+K+ LALMEE
Sbjct: 160 NKVKLALMEE 169


>sp|ENDA_THEKO|TRNA-SPLICING endonuclease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KLFLALME 9
KLFL+L+E
Sbjct: 35 KLFLSLLE 42


>sp|ENDA_THEGJ|TRNA-SPLICING endonuclease|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KLFLALME 9
KLFL+L+E
Sbjct: 35 KLFLSLLE 42




11|SequenceR|60|51|SPIKNDKLFL

>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SPIKNDKLFL 10
SP KN+ LFL
Sbjct: 8 SPCKNEDLFL 17


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SPIKNDKLFL 10
SP+K DK+F+
Sbjct: 50 SPMKVDKIFI 59


>sp|Y873_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 SPIKNDKLFL 10
+PIKN K+F+
Sbjct: 254 NPIKNKKIFV 263


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PIKNDKLFL 10
P+KN+KL L
Sbjct: 58 PMKNEKLHL 66


>sp|Y2264_ARCFU|PUTATIVE esterase AF_2264|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KNDKLF 9
KNDKLF
Sbjct: 28 KNDKLF 33


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PIKNDKLFL 10
P+KN+KL L
Sbjct: 58 PMKNEKLHL 66


>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 PIKNDKLFL 10
P+KN+KL L
Sbjct: 58 PMKNEKLHL 66


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SPIKNDKLF 9
+PI+ DKL+
Sbjct: 434 TPIEKDKLY 442


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 1 SPIKNDKLFL 10
SP+K +K+F+
Sbjct: 50 SPMKVEKIFI 59


>sp|Y971_METJA|UNCHARACTERIZED protein MJ0971|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SPIKNDKLFL 10
SP KN LF+
Sbjct: 275 SPTKNTALFI 284


>sp|FLAB1_METJA|FLAGELLIN B1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IKNDKLFL 10
+KN KLFL
Sbjct: 96 LKNAKLFL 103


>sp|ENDA_PYRHO|TRNA-SPLICING endonuclease|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IKNDKLFL 10
+K DKLFL
Sbjct: 34 LKGDKLFL 41


>sp|RNZ_THESM|RIBONUCLEASE Z|Thermococcus sibiricus (strain DSM 12597

Query: 1 SPIKNDKLFL 10
SP+K +K+F+
Sbjct: 50 SPMKIEKIFI 59


>sp|PYRI_METS3|ASPARTATE carbamoyltransferase regulatory chain|Methanobrevibacter smithii

Query: 2 PIKNDKLFL 10
P+K DK+ L
Sbjct: 94 PVKKDKIIL 102




12|SequenceR|65|56|KDLLDSPIKN

>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 KDLLDSPIKN 10
K L+D+P+KN
Sbjct: 349 KGLIDTPLKN 358


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 2 DLLDSPI 8
DLLD+P+
Sbjct: 240 DLLDAPV 246


>sp|Y36K_HALSN|UNCHARACTERIZED 36 kDa protein|Halobacterium sp. (strain GN101)

Query: 1 KDLLDSPIKN 10
+D+LD+ +KN
Sbjct: 181 QDVLDAHVKN 190


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 1 KDLLDSPIKN 10
K+L+DS +KN
Sbjct: 373 KELIDSCVKN 382


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 1 KDLLDSPIKN 10
K+L+DS +KN
Sbjct: 373 KELIDSCVKN 382


>sp|MVHD_METTH|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 1 KDLLDSPIK 9
KDL SPIK
Sbjct: 127 KDLGPSPIK 135


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KDLLDSPIKN 10
+DLLD+P +
Sbjct: 356 EDLLDAPFSD 365


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 KDLLDSPIKN 10
+DLLD+P +
Sbjct: 356 EDLLDAPFSD 365


>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KDLLDSPI 8
+DLLD+P+
Sbjct: 351 EDLLDTPL 358


>sp|DNLI_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 KDLLDSPIK 9
+DLLD P +
Sbjct: 393 EDLLDEPFR 401


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 1 KDLLDSPI 8
+DLLD P+
Sbjct: 4 EDLLDDPV 11


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 KDLLDSPIKN 10
+ L+D+P++N
Sbjct: 349 RGLIDTPLRN 358


>sp|Y763_METJA|UNCHARACTERIZED protein MJ0763|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KDLLDSPIKN 10
KDL D +KN
Sbjct: 36 KDLFDVEMKN 45


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KDLLDSPIKN 10
KD++DS +N
Sbjct: 471 KDIIDSAFEN 480


>sp|DNLI_METM7|DNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 KDLLDSPIKN 10
K L+D+P+K+
Sbjct: 349 KGLIDTPLKD 358




13|SequenceR|70|61|IPLFEKDLLD

>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 IPLFEKDLL 9
+PLFE D+L
Sbjct: 156 LPLFEADIL 164


>sp|Y2370_ARCFU|UPF0148 protein AF_2370|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IPLFEKD 7
+PLFEKD
Sbjct: 37 MPLFEKD 43


>sp|HPRT_METV3|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus voltae (strain ATCC

Query: 1 IPLFEKDLL 9
+PLF DLL
Sbjct: 31 VPLFTSDLL 39


>sp|NADM_PYRHO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PLFEKDLL 9
P+F+KD+L
Sbjct: 120 PMFKKDIL 127


>sp|Y890_METJA|UPF0148 protein MJ0890|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PLFEKD 7
PLFEKD
Sbjct: 47 PLFEKD 52


>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IPLFEKDLL 9
+PL E+DLL
Sbjct: 34 LPLSEEDLL 42


>sp|NADM_PYRFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PLFEKDLL 9
P+F+KD+L
Sbjct: 122 PMFKKDIL 129


>sp|NADM_HALLT|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PLFEKDLLD 10
P+F +D+L+
Sbjct: 117 PMFRRDVLE 125


>sp|NADM_PYRAB|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 PLFEKDLL 9
P+F KD+L
Sbjct: 120 PMFRKDIL 127


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PLFEKDLL 9
PLF+ D+L
Sbjct: 158 PLFDADIL 165


>sp|NADM_THEKO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PLFEKDLL 9
P+F KD+L
Sbjct: 122 PMFRKDIL 129


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 1 IPLFEKDLL 9
+PL EKD L
Sbjct: 208 LPLLEKDEL 216


>sp|Y795_PYRHO|UPF0148 protein PH0795|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PLFEKD 7
PLFEKD
Sbjct: 32 PLFEKD 37


>sp|Y1270_PYRAB|UPF0148 protein PYRAB12700|Pyrococcus abyssi (strain GE5 /

Query: 2 PLFEKD 7
PLFEKD
Sbjct: 32 PLFEKD 37


>sp|NADM_THEON|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 PLFEKDLL 9
P+F KD+L
Sbjct: 121 PMFRKDIL 128


>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PLFEKDLLD 10
PLF KD D
Sbjct: 91 PLFRKDFED 99


>sp|MOAB_PYRFU|MOLYBDOPTERIN adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PLFEKDL 8
PLF+K+L
Sbjct: 96 PLFDKEL 102


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PLFEKDLLD 10
PL+ +DL+D
Sbjct: 798 PLYNEDLID 806


>sp|NADM_THESM|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 2 PLFEKDLL 9
P+F KD+L
Sbjct: 120 PMFRKDIL 127


>sp|MOAE_THEVO|MOLYBDOPTERIN synthase catalytic subunit|Thermoplasma volcanium (strain ATCC

Query: 1 IPLFEKDLLD 10
+P++++D+L+
Sbjct: 121 VPIWKRDILE 130


>sp|SYFB_SACS2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IPLFEKDLL 9
IPL+EK+ L
Sbjct: 155 IPLYEKEEL 163


>sp|CORA_METJA|COBALT/MAGNESIUM transport protein CorA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PLFEKDL 8
PLFE+D+
Sbjct: 81 PLFEEDI 87


>sp|PSTOM_PYRAB|STOMATIN homolog PYRAB06580|Pyrococcus abyssi (strain GE5 /

Query: 1 IPLFEKDLL 9
IP+FEK ++
Sbjct: 54 IPIFEKAVI 62




14|SequenceR|75|66|PEEQLIPLFE

>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 1 PEEQLIPLFE 10
PE Q +P+FE
Sbjct: 182 PENQWVPIFE 191


>sp|NADE_THEAC|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PEEQLIPLF 9
P+E++IP+F
Sbjct: 46 PKERIIPVF 54


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PEEQLIPLF 9
P EQ++PL+
Sbjct: 26 PGEQILPLY 34


>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PEEQLIPL 8
PE+ LIP+
Sbjct: 296 PEKDLIPI 303


>sp|BSUHB_THEKO|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE kodakarensis (strain ATCC BAA-918

Query: 2 EEQLIPLF 9
EE+++PLF
Sbjct: 17 EEKIMPLF 24


>sp|Y2125_METS5|UPF0173 metal-dependent hydrolase Msed_2125|Metallosphaera sedula (strain

Query: 1 PEEQLIP 7
PE QLIP
Sbjct: 88 PEAQLIP 94


>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 3 EQLIPLFE 10
E LIP+FE
Sbjct: 187 EYLIPIFE 194


>sp|CAPPA_ARCFU|PHOSPHOENOLPYRUVATE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEE-QLIPLFE 10
PEE ++IPLFE
Sbjct: 170 PEEIKVIPLFE 180


>sp|IF2A_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PEEQLIPLFE 10
PEE + PL E
Sbjct: 167 PEEWIEPLLE 176


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EEQLIPLFE 10
EE++I +FE
Sbjct: 316 EEEIIKIFE 324




15|SequenceR|80|71|ALPPLPEEQL

>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ALPPLPEEQL 10
ALP LP EQ
Sbjct: 349 ALPHLPREQF 358


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ALPPLPEEQL 10
ALP LP EQ
Sbjct: 349 ALPHLPREQF 358


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LPPLPEE 8
+PPLPE+
Sbjct: 267 IPPLPED 273


>sp|TRUA_THESM|TRNA pseudouridine synthase A|Thermococcus sibiricus (strain DSM 12597

Query: 2 LPPLPEEQL 10
LPP P E L
Sbjct: 211 LPPAPPENL 219


>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ALPPLPEE 8
LPP P+E
Sbjct: 150 GLPPSPQE 157


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 ALPPLPEEQL 10
ALPP P+E++
Sbjct: 23 ALPPRPDEKV 32


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 2 LPPLPEEQL 10
+PP+P+E L
Sbjct: 227 IPPMPKEVL 235


>sp|HIS1_ARCFU|ATP phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPPLPEEQL 10
LPP+PE L
Sbjct: 112 LPPMPEADL 120


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 ALPPLPE 7
A+PP PE
Sbjct: 687 AIPPAPE 693


>sp|PUR7_ARCFU|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 3 PPLPEE 8
PPLP+E
Sbjct: 287 PPLPDE 292


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LPPLPEEQL 10
L LPEEQL
Sbjct: 432 LSTLPEEQL 440


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 ALPPLPE 7
A+PP PE
Sbjct: 687 AIPPAPE 693


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 1 ALPPLPE 7
LPPLP+
Sbjct: 434 GLPPLPK 440


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PPLPE 7
PPLPE
Sbjct: 164 PPLPE 168


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 PPLPE 7
PPLPE
Sbjct: 164 PPLPE 168


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PPLPE 7
PPLPE
Sbjct: 164 PPLPE 168


>sp|MCRG_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PLPEEQL 10
PLPEE+L
Sbjct: 208 PLPEEKL 214


>sp|Y644_THEKO|UNCHARACTERIZED protein TK0644|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ALPPLPEEQL 10
LP L EEQ+
Sbjct: 12 GLPELTEEQI 21




16|SequenceR|85|76|TFPVLALPPL

>sp|DPCKG_KORCO|GTP-DEPENDENT dephospho-CoA kinase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 FPVLALPP 9
FP + LPP
Sbjct: 122 FPAIILPP 129


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 1 TFPVLALPP 9
+FPV +PP
Sbjct: 182 SFPVPEIPP 190


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 2 FPVLALPPL 10
FP LPPL
Sbjct: 294 FPEADLPPL 302




17|SequenceR|90|81|RQEEETFPVL

>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 1 RQEEETFPV 9
R +EETFP+
Sbjct: 188 RVDEETFPL 196


>sp|MFNE_METJA|[5-(AMINOMETHYL)FURAN-3-YL]METHYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EETFPVL 10
+ETFP+L
Sbjct: 171 DETFPIL 177


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 4 EETFPVL 10
EETFP+L
Sbjct: 271 EETFPLL 277


>sp|MOBA_METMA|PROBABLE molybdenum cofactor guanylyltransferase|Methanosarcina mazei

Query: 2 QEEETFPVL 10
Q+E+ FPVL
Sbjct: 67 QKEKLFPVL 75


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 RQEEETFPVL 10
R+ +ET+P++
Sbjct: 363 RELQETYPII 372


>sp|AATE_THEON|A-TYPE ATP synthase subunit E|Thermococcus onnurineus (strain NA1)

Query: 3 EEETFPVL 10
EEE FP+L
Sbjct: 99 EEEYFPML 106




18|SequenceR|95|86|SMSFNRQEEE

***** No hits found ******


19|SequenceR|100|91|AASNVSMSFN

>sp|Y1671_METJA|UNCHARACTERIZED protein MJ1671|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ASNVSMSFN 10
+SNV +SFN
Sbjct: 20 SSNVKLSFN 28


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ASNVSMSFN 10
A N+SM FN
Sbjct: 331 AFNISMGFN 339


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 ASNVSMSFN 10
ASNV+ +FN
Sbjct: 493 ASNVTTAFN 501


>sp|COBQ_METST|PROBABLE cobyric acid synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 ASNVSMSF 9
A+NV MSF
Sbjct: 488 ANNVDMSF 495




20|SequenceR|105|96|TLRLVAASNV

***** No hits found ******


21|SequenceR|110|101|GGGRGTLRLV

>sp|IF1A_HALS3|TRANSLATION initiation factor 1A|Halobacterium salinarum (strain ATCC 29341

Query: 1 GGGRGTLRL 9
GGGR LR+
Sbjct: 5 GGGRKNLRM 13


>sp|IF1A1_HALSA|TRANSLATION initiation factor 1A 1|Halobacterium salinarum (strain ATCC

Query: 1 GGGRGTLRL 9
GGGR LR+
Sbjct: 5 GGGRKNLRM 13


>sp|BIOF_METJA|PUTATIVE 8-amino-7-oxononanoate synthase|Methanocaldococcus jannaschii

Query: 1 GGGRGTLR 8
G GRGTL+
Sbjct: 201 GDGRGTLK 208


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GGGRGTLRL 9
GGGRG+ R+
Sbjct: 121 GGGRGSGRI 129


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC

Query: 2 GGRGTLRLV 10
GG+GTL+ +
Sbjct: 37 GGKGTLKAI 45


>sp|FLAI_SULAC|ARCHAEAL flagellar ATPase motor FlaI|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GGRGTLRL 9
GG GT++L
Sbjct: 310 GGEGTIKL 317


>sp|XERA_SACS2|TYROSINE recombinase XerA|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GGGRGTLRL 9
G G GT++L
Sbjct: 26 GAGNGTIKL 34


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 GGGRGTLRLV 10
GG GTLR V
Sbjct: 89 GGDGGTLREV 98


>sp|PELO_METBU|PROTEIN pelota homolog|Methanococcoides burtonii (strain DSM 6242

Query: 1 GGGRGTLRLV 10
G G GTLR V
Sbjct: 165 GKGEGTLREV 174


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 GGGRGTLRLV 10
GG GTLR V
Sbjct: 89 GGDGGTLREV 98


>sp|FILR2_METH6|PROBABLE methanogenesis regulatory protein FilR2|Methanothrix harundinacea

Query: 1 GGGRGTLRLV 10
GGGR R+V
Sbjct: 63 GGGRSLPRMV 72




22|SequenceR|115|106|GVVTGGGGRG

>sp|PYRH_SULAC|URIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVVTGGGG 8
VVTGGGG
Sbjct: 38 AVVTGGGG 45


>sp|PYRH_STAMF|URIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 GVVTGGGG 8
++TGGGG
Sbjct: 38 AIITGGGG 45


>sp|PYRH_SACS2|URIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GVVTGGG 7
G+VTGGG
Sbjct: 39 GIVTGGG 45


>sp|PYRH_SACI3|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GVVTGGG 7
G+VTGGG
Sbjct: 38 GIVTGGG 44


>sp|PYRH_SACI7|URIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GVVTGGG 7
G+VTGGG
Sbjct: 38 GIVTGGG 44


>sp|PYRH_SACI6|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GVVTGGG 7
G+VTGGG
Sbjct: 38 GIVTGGG 44


>sp|PYRH_SACI4|URIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GVVTGGG 7
G+VTGGG
Sbjct: 38 GIVTGGG 44


>sp|PYRH_SACI2|URIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GVVTGGG 7
G+VTGGG
Sbjct: 38 GIVTGGG 44


>sp|PYRH_SACI1|URIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GVVTGGG 7
G+VTGGG
Sbjct: 38 GIVTGGG 44


>sp|GLCU_SACS2|GLUCOSE import system permease protein|Saccharolobus solfataricus (strain

Query: 5 GGGGRG 10
GGGG+G
Sbjct: 281 GGGGKG 286


>sp|CH60_METAC|CHAPERONIN GroEL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GVVTGGG 7
GVVTGGG
Sbjct: 409 GVVTGGG 415


>sp|CH60_METMA|CHAPERONIN GroEL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GVVTGGG 7
GVVTGGG
Sbjct: 409 GVVTGGG 415


>sp|PYRH_THEAC|URIDYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GVVTGGG 7
G+VTGGG
Sbjct: 40 GIVTGGG 46


>sp|PYRH_THEVO|URIDYLATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GVVTGGG 7
G+VTGGG
Sbjct: 40 GIVTGGG 46


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 GVVTGGG 7
GVV GGG
Sbjct: 123 GVVEGGG 129


>sp|RIFK_HALMA|RIBOFLAVIN kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVVTGGGGRG 10
GVVT G G G
Sbjct: 191 GVVTSGMGEG 200


>sp|GCH1L_PYRHO|GTP cyclohydrolase 1 type 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GVVTGGGG 8
VV+GGGG
Sbjct: 173 AVVSGGGG 180


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GVVTGGGGRG 10
G++T GG G
Sbjct: 301 GIITNAGGFG 310


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VVTGGGGR 9
+ GGGGR
Sbjct: 288 LAVGGGGR 295


>sp|GLMS_THEKO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Thermococcus kodakarensis (strain

Query: 1 GVVTGGG 7
GVVTG G
Sbjct: 33 GVVTGNG 39


>sp|SYH_PYRIL|HISTIDINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VVTGGGGR 9
+ GGGGR
Sbjct: 288 LAVGGGGR 295


>sp|G6PD_HALVD|NAD-DEPENDENT glucose-6-phosphate dehydrogenase|Haloferax volcanii (strain ATCC

Query: 2 VVTGGGGR 9
++TG GGR
Sbjct: 6 LLTGAGGR 13


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VVTGGGG 8
+V+GGGG
Sbjct: 885 LVSGGGG 891


>sp|PYRH_METMA|URIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VVTGGG 7
VVTGGG
Sbjct: 39 VVTGGG 44


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VVTGGGGR 9
+ GGGGR
Sbjct: 288 LAVGGGGR 295


>sp|RIFK_THEAC|RIBOFLAVIN kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GVVTGGGGRG 10
G VT G G G
Sbjct: 97 GTVTSGMGEG 106


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 1 GVVTGGGG 8
GVV G GG
Sbjct: 694 GVVQGNGG 701


>sp|SYH_PYRAR|HISTIDINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VVTGGGGR 9
+ GGGGR
Sbjct: 288 LAVGGGGR 295


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVVTGGGGRG 10
G++TG G G
Sbjct: 582 GILTGPAGTG 591


>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 1 GVVTGGG 7
G+V+GGG
Sbjct: 408 GIVSGGG 414


>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GVVTGG 6
GV+TGG
Sbjct: 159 GVITGG 164


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 VVTGGGGR 9
+V GGGGR
Sbjct: 4 LVAGGGGR 11


>sp|RIFK_NATPD|RIBOFLAVIN kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GVVTGGGGRG 10
GVVT G G G
Sbjct: 102 GVVTSGMGEG 111


>sp|RIFK_HALWD|RIBOFLAVIN kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GVVTGGGGRG 10
G VT G G G
Sbjct: 103 GTVTSGMGEG 112




23|SequenceR|120|111|RGRPAGVVTG

>sp|Y891_STAMF|UPF0173 metal-dependent hydrolase Smar_0891|Staphylothermus marinus (strain

Query: 1 RGRPAGVVTG 10
RG P GVV G
Sbjct: 120 RGAPTGVVVG 129


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RGRPAGVVTG 10
R RP GV+ G
Sbjct: 959 RMRPLGVIKG 968


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 PAGVVTG 10
P GVVTG
Sbjct: 627 PPGVVTG 633


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RGRPAGVVTG 10
R RP GVV G
Sbjct: 475 RQRPIGVVKG 484


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GRPAGVVTG 10
G P G VTG
Sbjct: 264 GLPIGAVTG 272


>sp|TRPE_ARCFU|ANTHRANILATE synthase component 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PAGVVTG 10
PAG VTG
Sbjct: 323 PAGTVTG 329


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 2 GRPAGVVTG 10
G PAG +TG
Sbjct: 201 GVPAGRITG 209


>sp|MOAA_PYRAE|PROBABLE GTP 3',8-cyclase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GRPAGV 7
GRPAGV
Sbjct: 217 GRPAGV 222


>sp|PGP_METKA|PHOSPHOGLYCOLATE phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 RGRPAGVVTG 10
RG P G+ TG
Sbjct: 34 RGIPVGIATG 43


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 1 RGRPAGV 7
RGRPA +
Sbjct: 454 RGRPANI 460


>sp|Y1309_METJA|UNCHARACTERIZED protein MJ1309|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GRPAGVVTG 10
G P G+V G
Sbjct: 310 GTPLGIVAG 318


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 RGRPAGVVTG 10
R RP GVV G
Sbjct: 979 RLRPIGVVKG 988


>sp|DPCKG_METAR|GTP-DEPENDENT dephospho-CoA kinase|Methanocella arvoryzae (strain DSM 22066

Query: 4 PAGVVT 9
PAGVVT
Sbjct: 95 PAGVVT 100


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GRPAGVVTG 10
G P G +TG
Sbjct: 13 GGPVGCITG 21


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 GRPAGVV 8
G+PAGV+
Sbjct: 533 GQPAGVI 539


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 GRPAGVV 8
G+PAGV+
Sbjct: 533 GQPAGVI 539


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GRPAGVVT 9
G PAG++T
Sbjct: 218 GMPAGILT 225




24|SequenceR|125|116|GRSSSRGRPA

***** No hits found ******


25|SequenceR|130|121|RGRGRGRSSS

>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 RGRGRGRSS 9
RGRG+GR++
Sbjct: 357 RGRGKGRTN 365


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 1 RGRGRGRSS 9
RGRG+GR++
Sbjct: 356 RGRGKGRTN 364


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 2 GRGRGRSSS 10
RGRG+S+S
Sbjct: 240 ARGRGKSAS 248


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 3 RGRGRSSS 10
RGRG+SS+
Sbjct: 255 RGRGKSSA 262


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 4 GRGRSSS 10
GRGRSSS
Sbjct: 750 GRGRSSS 756


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 2 GRGRGRSSS 10
RGRG+S+S
Sbjct: 239 ARGRGKSAS 247


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 2 GRGRGRSSS 10
RGRG+S++
Sbjct: 232 ARGRGKSAA 240


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GRGRGR 7
GRGRG+
Sbjct: 127 GRGRGK 132


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 3 RGRGRSSS 10
RGRG+S S
Sbjct: 290 RGRGKSVS 297


>sp|SYY_HALLT|TYROSINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 GRGRGRSSS 10
G GRG+ SS
Sbjct: 207 GTGRGKMSS 215


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 3 RGRGRSSS 10
RGRG+S S
Sbjct: 288 RGRGKSVS 295


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 3 RGRGRSSS 10
RGRG+S S
Sbjct: 288 RGRGKSVS 295


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RGRGRGRS 8
RGRG+G +
Sbjct: 267 RGRGQGHA 274


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 3 RGRGRSSS 10
RGRG+S S
Sbjct: 289 RGRGKSVS 296




26|SequenceR|135|126|FGCEGRGRGR

>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC 43049

Query: 4 EGRGRGR 10
EGRGR R
Sbjct: 354 EGRGRSR 360


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GCEGRGRGR 10
GC+GR + R
Sbjct: 397 GCDGRHKTR 405


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GCEGRGRGR 10
GC+GR + R
Sbjct: 393 GCDGRHKTR 401


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GCEGRGRG 9
GC+G G+G
Sbjct: 861 GCKGGGKG 868


>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 1 FGCEGRG 7
+GC GRG
Sbjct: 104 YGCAGRG 110


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 CEGRGRG 9
CEG RG
Sbjct: 145 CEGEARG 151


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 CEGRGRG 9
CEG RG
Sbjct: 145 CEGEARG 151


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 CEGRGRG 9
CEG RG
Sbjct: 145 CEGEARG 151


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 CEGRGRG 9
CEG RG
Sbjct: 145 CEGEARG 151


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 CEGRGRG 9
CEG RG
Sbjct: 147 CEGEARG 153


>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GCEGRGRGR 10
GC+GR + R
Sbjct: 394 GCDGRHKER 402


>sp|BPSA_METJA|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CEGRG 7
CEGRG
Sbjct: 93 CEGRG 97


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 GRGRGR 10
GRGRG+
Sbjct: 127 GRGRGK 132


>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 5 GRGRGR 10
GRG+GR
Sbjct: 358 GRGKGR 363


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 5 GRGRGR 10
GRG+GR
Sbjct: 357 GRGKGR 362


>sp|IF2P_ARCFU|PROBABLE translation initiation factor IF-2|Archaeoglobus fulgidus (strain

Query: 4 EGRGRG 9
EG+GRG
Sbjct: 234 EGKGRG 239


>sp|MPTN_METJA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGCEGRG 7
FGC G G
Sbjct: 139 FGCGGEG 145


>sp|Y811_METJA|UNCHARACTERIZED protein MJ0811|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGCEGRGRG 9
F EG+G G
Sbjct: 122 FASEGKGEG 130


>sp|FENR_PICTO|FERREDOXIN--NADP reductase|Picrophilus torridus (strain ATCC 700027

Query: 2 GCEGRGR 8
GCEG R
Sbjct: 126 GCEGEDR 132


>sp|NIFH1_METTL|NITROGENASE iron protein 1|Methanothermococcus thermolithotrophicus

Query: 2 GCEGRG 7
GC GRG
Sbjct: 104 GCAGRG 109


>sp|RRP4_METS3|EXOSOME complex component Rrp4|Methanobrevibacter smithii (strain ATCC

Query: 1 FGCEGRGRGR 10
G +GRG G+
Sbjct: 128 LGLKGRGMGK 137


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GCEGRG 7
GC GRG
Sbjct: 94 GCAGRG 99


>sp|NIFH_METJA|NITROGENASE iron protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GCEGRG 7
GC GRG
Sbjct: 93 GCAGRG 98


>sp|NIFH_METVO|NITROGENASE iron protein|Methanococcus voltae

Query: 2 GCEGRG 7
GC GRG
Sbjct: 93 GCAGRG 98


>sp|NIFH_METMP|NITROGENASE iron protein|Methanococcus maripaludis (strain DSM 14266

Query: 2 GCEGRG 7
GC GRG
Sbjct: 96 GCAGRG 101


>sp|NIFH_METMI|NITROGENASE iron protein|Methanococcus maripaludis (Methanococcus deltae)

Query: 2 GCEGRG 7
GC GRG
Sbjct: 96 GCAGRG 101


>sp|NIFH_METAR|NITROGENASE iron protein|Methanocella arvoryzae (strain DSM 22066

Query: 2 GCEGRG 7
GC GRG
Sbjct: 93 GCAGRG 98


>sp|NIFH1_METIV|NITROGENASE iron protein 1|Methanobacterium ivanovii

Query: 2 GCEGRG 7
GC GRG
Sbjct: 97 GCAGRG 102


>sp|NIFH1_METBA|NITROGENASE iron protein 1|Methanosarcina barkeri

Query: 2 GCEGRG 7
GC GRG
Sbjct: 96 GCAGRG 101




27|SequenceR|140|131|FSRQYFGCEG

>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FSRQYFGCEG 10
F R YF C+G
Sbjct: 273 FLRAYFDCDG 282


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 FSRQYFG 7
F RQYFG
Sbjct: 294 FKRQYFG 300


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 FSRQYFG 7
F RQYFG
Sbjct: 294 FRRQYFG 300


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 FSRQYFG 7
F RQYFG
Sbjct: 294 FRRQYFG 300


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FSRQYFGCEG 10
F R YF C G
Sbjct: 270 FLRAYFDCNG 279


>sp|IF6_METS3|TRANSLATION initiation factor 6|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 FSRQYFGCEG 10
F+R FG EG
Sbjct: 167 FARDVFGVEG 176


>sp|DGGGP_PYRFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 YFGCEG 10
YFGC G
Sbjct: 47 YFGCSG 52


>sp|RIBL_METFV|FAD synthase|Methanothermus fervidus (strain ATCC 43054

Query: 5 YFGCEG 10
Y GCEG
Sbjct: 68 YLGCEG 73


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 FSRQYFG 7
+ RQYFG
Sbjct: 294 YRRQYFG 300


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 FSRQYFG 7
+ RQYFG
Sbjct: 294 YRRQYFG 300


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSRQYFGC 8
FSRQ F C
Sbjct: 1055 FSRQEFRC 1062


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 SRQYFGCE 9
SR Y GCE
Sbjct: 60 SRYYGGCE 67


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 SRQYFGCE 9
SR Y GCE
Sbjct: 60 SRYYGGCE 67


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 FSRQYFGCEG 10
F R YF C+
Sbjct: 275 FLRAYFDCDA 284


>sp|Y1635_METJA|TNPB-LIKE protein MJ1635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSRQYFGC 8
F+RQ GC
Sbjct: 353 FNRQLVGC 360


>sp|APE2_AERPE|HOMING endonuclease I-ApeII|Aeropyrum pernix (strain ATCC 700893

Query: 3 RQYFGC 8
+ YFGC
Sbjct: 54 KNYFGC 59


>sp|ENDA_ARCFU|TRNA-SPLICING endonuclease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSRQYFGCE 9
FSR ++G E
Sbjct: 166 FSRYFYGSE 174




28|SequenceR|145|136|GEVEDFSRQY

>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 EVEDFSRQY 10
E+ED SR+Y
Sbjct: 126 ELEDLSRKY 134


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VEDFSRQY 10
VEDFSR Y
Sbjct: 702 VEDFSRWY 709


>sp|DPCKG_IGNH4|GTP-DEPENDENT dephospho-CoA kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GEVEDFSRQY 10
G+VE+F R++
Sbjct: 151 GDVEEFLREF 160


>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 GEVEDFSRQY 10
GE+ D R+Y
Sbjct: 233 GELHDMEREY 242


>sp|DTDA_PYRIL|D-AMINOACYL-TRNA deacylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GEVEDFSRQ 9
GE DFSR+
Sbjct: 47 GEPTDFSRE 55


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GEVEDFSR 8
GEVED +R
Sbjct: 27 GEVEDIAR 34


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GEVEDFSRQ 9
G+VE+F RQ
Sbjct: 135 GDVEEFLRQ 143


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GEVEDFSRQ 9
G+VE+F RQ
Sbjct: 135 GDVEEFLRQ 143


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GEVEDFSRQ 9
G+VE+F RQ
Sbjct: 135 GDVEEFLRQ 143


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GEVEDFSRQ 9
G+VE+F RQ
Sbjct: 135 GDVEEFLRQ 143


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GEVEDFSRQ 9
G+VE+F RQ
Sbjct: 135 GDVEEFLRQ 143


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GEVEDFSRQ 9
G+VE+F RQ
Sbjct: 135 GDVEEFLRQ 143


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 1 GEVEDFSRQY 10
GE + SR+Y
Sbjct: 80 GEANELSREY 89


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 2 EVEDFSR 8
E+EDF R
Sbjct: 22 EIEDFER 28


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 2 EVEDFSR 8
E+EDF R
Sbjct: 22 EIEDFER 28


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GEVEDFSR 8
GE++DF R
Sbjct: 451 GELDDFMR 458


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VEDFSRQY 10
+EDF R Y
Sbjct: 725 IEDFHRMY 732


>sp|RS3A_METS3|SMALL ribosomal subunit protein eS1|Methanobrevibacter smithii (strain

Query: 5 DFSRQY 10
DFS+QY
Sbjct: 59 DFSKQY 64


>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 1 GEVEDF 6
GE+EDF
Sbjct: 56 GEIEDF 61


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EVEDFSRQY 10
++EDF R++
Sbjct: 280 KIEDFERKF 288


>sp|Y941_METKA|UNCHARACTERIZED methyltransferase MK0941|Methanopyrus kandleri (strain AV19 /

Query: 1 GEVEDFSRQ 9
G +EDF R+
Sbjct: 143 GRLEDFGRR 151




29|SequenceR|150|141|GRGFVGEVED

>sp|NADE_PYRAE|NH(3)-DEPENDENT NAD(+) synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RGFVGEVED 10
RGF GEV D
Sbjct: 231 RGFFGEVVD 239


>sp|UPPP_PYRAE|UNDECAPRENYL-DIPHOSPHATASE aerophilum (strain ATCC 51768

Query: 2 RGFVGEVE 9
RGFVG+ E
Sbjct: 70 RGFVGDAE 77


>sp|Y1337_METJA|UNCHARACTERIZED protein MJ1337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RGFVGEVED 10
RGF+ E++D
Sbjct: 111 RGFISEIDD 119


>sp|TRMBR_THELN|HTH-TYPE sugar sensing transcriptional regulator|Thermococcus litoralis

Query: 2 RGFVGEVE 9
RGFV E+E
Sbjct: 59 RGFVTEIE 66


>sp|TRMBR_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus

Query: 2 RGFVGEVE 9
RGFV E+E
Sbjct: 59 RGFVTEIE 66


>sp|RS8_PYRNV|SMALL ribosomal subunit protein uS8|Pyrobaculum neutrophilum (strain

Query: 3 GFVGEVE 9
G+VGEVE
Sbjct: 45 GYVGEVE 51


>sp|GGGPS_METVS|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GFVGEVED 10
GFVGEV +
Sbjct: 140 GFVGEVNE 147


>sp|GGGPS_METMP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GFVGEVED 10
GFVGEV +
Sbjct: 140 GFVGEVNE 147


>sp|GGGPS_METM7|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 3 GFVGEVED 10
GFVGEV +
Sbjct: 140 GFVGEVNE 147


>sp|GGGPS_METM6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 3 GFVGEVED 10
GFVGEV +
Sbjct: 140 GFVGEVNE 147


>sp|GGGPS_META3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GFVGEVED 10
GFVGEV +
Sbjct: 138 GFVGEVNE 145


>sp|GGGPS_METM5|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 3 GFVGEVED 10
GFVGEV +
Sbjct: 140 GFVGEVNE 147


>sp|RS8_PYRAE|SMALL ribosomal subunit protein uS8|Pyrobaculum aerophilum (strain ATCC

Query: 3 GFVGEVE 9
G+VGE+E
Sbjct: 45 GYVGEIE 51


>sp|ARGB_METTP|ACETYLGLUTAMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GFVGEVED 10
G+VGEVE+
Sbjct: 144 GYVGEVEE 151


>sp|Y686_METJA|UNCHARACTERIZED protein MJ0686|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RGFVGEVED 10
+ F G+VED
Sbjct: 267 KNFAGDVED 275


>sp|RS8_PYRIL|SMALL ribosomal subunit protein uS8|Pyrobaculum islandicum (strain DSM

Query: 3 GFVGEVE 9
G+VGE+E
Sbjct: 45 GYVGEIE 51


>sp|RIB7_SACS2|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Saccharolobus solfataricus (strain ATCC

Query: 1 GRGFVGE 7
G GF+GE
Sbjct: 179 GEGFIGE 185


>sp|RS8_PYRAR|SMALL ribosomal subunit protein uS8|Pyrobaculum arsenaticum (strain DSM

Query: 3 GFVGEVE 9
G+VGE+E
Sbjct: 45 GYVGEIE 51


>sp|RS8_PYRCJ|SMALL ribosomal subunit protein uS8|Pyrobaculum calidifontis (strain

Query: 3 GFVGEVE 9
G+VGE+E
Sbjct: 45 GYVGEIE 51


>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 RGFVGEVED 10
RG VG +ED
Sbjct: 187 RGLVGSLED 195


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 GRGFVGEVED 10
RG + EVED
Sbjct: 280 NRGLIFEVED 289


>sp|THS2_HALVD|CHAPERONIN subunit CTT2|Haloferax volcanii (strain ATCC 29605

Query: 4 FVGEVED 10
F GEVED
Sbjct: 483 FTGEVED 489


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRGFVGEVED 10
GRG V +VE+
Sbjct: 155 GRGIVFDVEN 164


>sp|RL3_METJA|LARGE ribosomal subunit protein uL3|Methanocaldococcus jannaschii (strain

Query: 1 GRGFVGEVE 9
G+GF G+V+
Sbjct: 204 GKGFQGQVK 212


>sp|THSB_THEAC|THERMOSOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 FVGEVED 10
F GE+ED
Sbjct: 480 FTGEIED 486


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RGFVGEVED 10
R F+G +ED
Sbjct: 7 REFIGRLED 15


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 1 GRGFVGEVE 9
G+GF G V+
Sbjct: 200 GKGFTGHVQ 208


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 1 GRGFVGEVED 10
GR +VG V+D
Sbjct: 567 GRPYVGLVKD 576


>sp|Y1150_METJA|UPF0215 protein MJ1150|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRGFVG 6
GRGF+G
Sbjct: 177 GRGFLG 182


>sp|NDK_METMA|NUCLEOSIDE diphosphate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RGFVGEV 8
RG VGEV
Sbjct: 15 RGLVGEV 21


>sp|NDK_METAC|NUCLEOSIDE diphosphate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RGFVGEV 8
RG VGEV
Sbjct: 15 RGLVGEV 21


>sp|NADK_PICTO|NAD kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 GRGFVGEVE 9
G GF+ E+E
Sbjct: 83 GLGFLSEIE 91




30|SequenceR|155|146|MERGGGRGFV

>sp|SYS_SULTO|SERINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MERGGGRGFV 10
+E+GG +G+V
Sbjct: 390 VEKGGKKGYV 399


>sp|PANE_PYRAE|2-DEHYDROPANTOATE 2-reductase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MERGGGR 7
+ERGGGR
Sbjct: 138 LERGGGR 144


>sp|BRIX_METTH|PROBABLE Brix domain-containing ribosomal biogenesis|Methanothermobacter

Query: 2 ERGGGRGFV 10
ERGG RG++
Sbjct: 65 ERGGERGYI 73


>sp|Y1865_ARCFU|UNCHARACTERIZED protein AF_1865|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GGRGFV 10
GGRGFV
Sbjct: 237 GGRGFV 242


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 ERGGGRGFV 10
E+ GG GFV
Sbjct: 807 EKLGGEGFV 815


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ERGGGRGFV 10
E+ GG GFV
Sbjct: 807 EKLGGEGFV 815


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ERGGGRGFV 10
E+ GG GFV
Sbjct: 807 EKLGGEGFV 815


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ERGGGRGFV 10
E+ GG GFV
Sbjct: 807 EKLGGEGFV 815


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 ERGGGRGFV 10
E+ GG GFV
Sbjct: 807 EKLGGEGFV 815


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 ERGGGRGFV 10
ER GG GFV
Sbjct: 774 ERYGGEGFV 782


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 1 MERGGGRGF 9
+E+G G+GF
Sbjct: 352 LEKGNGKGF 360


>sp|DHYS_PYRAE|PROBABLE deoxyhypusine synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ERGGGRGFV 10
+RGG R F+
Sbjct: 187 KRGGSRAFI 195


>sp|RRP4_AERPE|EXOSOME complex component Rrp4|Aeropyrum pernix (strain ATCC 700893

Query: 4 GGGRGFV 10
GGGR FV
Sbjct: 50 GGGRAFV 56


>sp|MTQ2_ARCFU|RELEASE factor glutamine methyltransferase Mtq2|Archaeoglobus fulgidus

Query: 1 MERGGGRGFV 10
+E G G GFV
Sbjct: 27 IEVGAGSGFV 36


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ERGGGRG 8
ERG G+G
Sbjct: 29 ERGNGKG 35




31|SequenceR|160|151|SQSRHMERGG

***** No hits found ******


32|SequenceR|165|156|GREEWSQSRH

>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 4 EWSQSR 9
EW+QSR
Sbjct: 53 EWAQSR 58


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 EWSQSR 9
EW+QSR
Sbjct: 53 EWAQSR 58


>sp|TDH_PYRHO|L-THREONINE 3-dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 EWSQSR 9
EW+QSR
Sbjct: 53 EWAQSR 58


>sp|TDH_PYRAB|L-THREONINE 3-dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 4 EWSQSR 9
EW+QSR
Sbjct: 53 EWAQSR 58


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 REEWSQSR 9
+EEWS++R
Sbjct: 21 QEEWSKNR 28


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 REEWSQSR 9
REEW ++R
Sbjct: 20 REEWERAR 27


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GREEWSQ 7
G EEW++
Sbjct: 275 GNEEWTE 281


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 GREEWSQ 7
G EEW++
Sbjct: 275 GNEEWTE 281


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GREEWSQ 7
G EEW++
Sbjct: 275 GNEEWTE 281


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain

Query: 2 REEWS 6
REEWS
Sbjct: 15 REEWS 19


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 EEWSQSRH 10
EEW +RH
Sbjct: 609 EEWEGARH 616




33|SequenceR|170|161|EFRRDGREEW

>sp|PCNA_THEVO|DNA polymerase sliding clamp|Thermoplasma volcanium (strain ATCC

Query: 1 EFRRDGREE 9
EFR DG EE
Sbjct: 58 EFRSDGTEE 66


>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 2 FRRDGR 7
FRRDGR
Sbjct: 438 FRRDGR 443


>sp|PCNA_THEAC|DNA polymerase sliding clamp|Thermoplasma acidophilum (strain ATCC

Query: 1 EFRRDGREE 9
EF DG+EE
Sbjct: 58 EFHTDGQEE 66


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 1 EFRRDGREE 9
E +R+GREE
Sbjct: 395 EAKREGREE 403


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 FRRDGREEW 10
FR D RE W
Sbjct: 294 FREDTREWW 302


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 FRRDGREEW 10
FR D RE W
Sbjct: 294 FREDTREWW 302


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 1 EFRRDGREE 9
+F R GREE
Sbjct: 409 KFVRQGREE 417


>sp|IF2G_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 1 EFRRDGREEW 10
+ ++DG++ W
Sbjct: 255 QVKKDGKQTW 264


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 RRDGREEW 10
RR+ EEW
Sbjct: 271 RREALEEW 278


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 4 RDGREEW 10
+DG+E W
Sbjct: 305 KDGKEYW 311


>sp|Y1404_METJA|UNCHARACTERIZED protein MJ1404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RRDGREEW 10
++DG+EE+
Sbjct: 46 KKDGKEEY 53


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 4 RDGREEW 10
+DG+E W
Sbjct: 324 KDGKEYW 330


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 FRRDGRE 8
F RDGRE
Sbjct: 207 FERDGRE 213


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 RRDGREEW 10
RR+G+ EW
Sbjct: 148 RRNGKIEW 155


>sp|ADEC_ARCFU|ADENINE deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EFRRDGREEW 10
EF+R EW
Sbjct: 348 EFKRFNHPEW 357




34|SequenceR|175|166|KRGPKEFRRD

>sp|RL6_METM5|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 KRGPKEFRRD 10
K G KE RRD
Sbjct: 29 KSGAKELRRD 38


>sp|Y3716_METBF|UPF0173 metal-dependent hydrolase Mbar_A3716|Methanosarcina barkeri (strain

Query: 1 KRGPKEFRR 9
K+ P+EF+R
Sbjct: 201 KQDPEEFKR 209


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KRGPKEF 7
KRGP+EF
Sbjct: 559 KRGPREF 565


>sp|RL6_METM7|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 KRGPKEFRRD 10
K G KE +RD
Sbjct: 29 KSGAKELKRD 38


>sp|RL6_METM6|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 KRGPKEFRRD 10
K G KE +RD
Sbjct: 29 KSGAKELKRD 38


>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 4 PKEFRRD 10
P EFRR+
Sbjct: 200 PSEFRRE 206


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 RGPKEFRR 9
R P+EFRR
Sbjct: 189 RSPEEFRR 196


>sp|OFOB1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 3 GPKEFRR 9
GP EFR+
Sbjct: 300 GPDEFRK 306


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 1 KRGPKEFRRD 10
K PK+ RRD
Sbjct: 395 KEDPKKVRRD 404


>sp|TCPO_METOL|PROBABLE 2' cyclic ADP-D-ribose synthase|Methanobrevibacter olleyae

Query: 1 KRGPKEFR 8
KR PK FR
Sbjct: 151 KRNPKHFR 158


>sp|RL14_NITMS|LARGE ribosomal subunit protein uL14|Nitrosopumilus maritimus (strain

Query: 1 KRGPKEFRR 9
K+GP E R+
Sbjct: 66 KKGPAELRK 74


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 PKEFRRD 10
PKE RRD
Sbjct: 290 PKEKRRD 296




35|SequenceR|180|171|PRGVDKRGPK

>sp|PSB_ARCPA|PROTEASOME subunit beta|Archaeoglobus profundus (strain DSM 5631

Query: 3 GVDKRGP 9
GVDKRGP
Sbjct: 115 GVDKRGP 121


>sp|PSB_METPS|PROTEASOME subunit beta|Methanocella paludicola (strain DSM 17711

Query: 3 GVDKRGPK 10
GVDK GPK
Sbjct: 109 GVDKSGPK 116


>sp|PSB_METTP|PROTEASOME subunit beta|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GVDKRGPK 10
GVDK GPK
Sbjct: 110 GVDKMGPK 117


>sp|PSB1_SULAC|PROTEASOME subunit beta 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GVDKRGPK 10
GVD+ GPK
Sbjct: 107 GVDEDGPK 114


>sp|PSB2_CALMQ|PROTEASOME subunit beta 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 GVDKRGPK 10
G+D+ GPK
Sbjct: 112 GIDEEGPK 119


>sp|PSB1_SACS9|PROTEASOME subunit beta 1|Saccharolobus solfataricus (strain 98/2) (Sulfolobus

Query: 3 GVDKRGPK 10
GVD++GP+
Sbjct: 107 GVDEKGPQ 114


>sp|PSB1_SACS2|PROTEASOME subunit beta 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GVDKRGPK 10
GVD++GP+
Sbjct: 107 GVDEKGPQ 114


>sp|PSB_METAR|PROTEASOME subunit beta|Methanocella arvoryzae (strain DSM 22066

Query: 3 GVDKRGPK 10
G+DK GPK
Sbjct: 112 GLDKAGPK 119


>sp|PSB2_SACI9|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.D.8.5 /

Query: 3 GVDKRGPK 10
GVD++GP+
Sbjct: 107 GVDEKGPQ 114


>sp|PSB2_SACI7|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GVDKRGPK 10
GVD++GP+
Sbjct: 107 GVDEKGPQ 114


>sp|PSB2_SACI6|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GVDKRGPK 10
GVD++GP+
Sbjct: 107 GVDEKGPQ 114


>sp|PSB2_SACI4|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GVDKRGPK 10
GVD++GP+
Sbjct: 107 GVDEKGPQ 114


>sp|PSB2_SACI3|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.27)

Query: 3 GVDKRGPK 10
GVD++GP+
Sbjct: 107 GVDEKGPQ 114


>sp|PSB2_SACI2|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GVDKRGPK 10
GVD++GP+
Sbjct: 107 GVDEKGPQ 114


>sp|PSB1_SACI1|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GVDKRGPK 10
GVD++GP+
Sbjct: 107 GVDEKGPQ 114


>sp|PSB_METBU|PROTEASOME subunit beta|Methanococcoides burtonii (strain DSM 6242

Query: 3 GVDKRGP 9
GVDK GP
Sbjct: 112 GVDKNGP 118


>sp|PSB_METAC|PROTEASOME subunit beta|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GVDKRGP 9
GVDK GP
Sbjct: 112 GVDKNGP 118


>sp|Y740_ARCFU|PUTATIVE uncharacterized protein AF_0740|Archaeoglobus fulgidus (strain ATCC

Query: 3 GVDKRGP 9
GVD+RGP
Sbjct: 102 GVDERGP 108


>sp|PSB_METTE|PROTEASOME subunit beta|Methanosarcina thermophila

Query: 3 GVDKRGP 9
GVDK GP
Sbjct: 112 GVDKNGP 118


>sp|PSB_METMA|PROTEASOME subunit beta|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GVDKRGP 9
GVDK GP
Sbjct: 112 GVDKNGP 118


>sp|PSB_METBF|PROTEASOME subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 3 GVDKRGP 9
GVDK GP
Sbjct: 112 GVDKNGP 118


>sp|PSB_METMS|PROTEASOME subunit beta|Methanohalophilus mahii (strain ATCC 35705

Query: 3 GVDKRGP 9
GVDK GP
Sbjct: 112 GVDKNGP 118


>sp|PSB1_SULTO|PROTEASOME subunit beta 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GVDKRGPK 10
GVD GPK
Sbjct: 107 GVDDEGPK 114


>sp|RL14_METLZ|LARGE ribosomal subunit protein uL14|Methanocorpusculum labreanum (strain

Query: 1 PRGVDKRGP 9
PRG D +GP
Sbjct: 104 PRGTDIKGP 112


>sp|PSB2_KORCO|PROTEASOME subunit beta 2|Korarchaeum cryptofilum (strain OPF8)

Query: 3 GVDKRGPK 10
G+D GPK
Sbjct: 107 GIDNSGPK 114


>sp|RL14_PYRFU|LARGE ribosomal subunit protein uL14|Pyrococcus furiosus (strain ATCC

Query: 1 PRGVDKRGP 9
PRG + RGP
Sbjct: 113 PRGTEIRGP 121


>sp|RL14_PYRHO|LARGE ribosomal subunit protein uL14|Pyrococcus horikoshii (strain ATCC

Query: 1 PRGVDKRGP 9
PRG + RGP
Sbjct: 113 PRGTEIRGP 121


>sp|RL14_PYRAB|LARGE ribosomal subunit protein uL14|Pyrococcus abyssi (strain GE5 /

Query: 1 PRGVDKRGP 9
PRG + RGP
Sbjct: 113 PRGTEIRGP 121


>sp|FEN_NITMS|FLAP endonuclease 1|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PRGVDKRGPK 10
P G ++ GPK
Sbjct: 239 PNGFERVGPK 248


>sp|ENDA_AERPE|TRNA-SPLICING endonuclease|Aeropyrum pernix (strain ATCC 700893

Query: 1 PRGVDKRGP 9
PRG D GP
Sbjct: 45 PRGADFEGP 53


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PRGVDK 6
PRGVD+
Sbjct: 187 PRGVDR 192


>sp|PGP2_SACS2|PHOSPHOGLYCOLATE phosphatase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PRGVDK 6
P+GVDK
Sbjct: 147 PKGVDK 152


>sp|RL14_AERPE|LARGE ribosomal subunit protein uL14|Aeropyrum pernix (strain ATCC 700893

Query: 1 PRGVDKRGP 9
PRG + RGP
Sbjct: 112 PRGSEVRGP 120


>sp|PSB1_PYRIL|PROTEASOME subunit beta 1|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GVDKRGP 9
GVD+ GP
Sbjct: 111 GVDEEGP 117


>sp|THSB_THEAC|THERMOSOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PRGVDK 6
PRG+DK
Sbjct: 43 PRGMDK 48


>sp|THSA_SULTO|CHAPERONIN subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PRGVDK 6
PRG+DK
Sbjct: 42 PRGLDK 47


>sp|THSB_SULAC|CHAPERONIN subunit beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PRGVDK 6
PRG+DK
Sbjct: 52 PRGMDK 57


>sp|FEN_METTP|FLAP endonuclease 1|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RGVDKRGPK 10
RG+ K GPK
Sbjct: 237 RGLPKVGPK 245


>sp|THS3_HALVD|CHAPERONIN subunit CTT3|Haloferax volcanii (strain ATCC 29605

Query: 1 PRGVDK 6
PRG+DK
Sbjct: 45 PRGMDK 50


>sp|THSA_SULAC|CHAPERONIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PRGVDK 6
PRG+DK
Sbjct: 41 PRGLDK 46


>sp|RL14_METKA|LARGE ribosomal subunit protein uL14|Methanopyrus kandleri (strain AV19 /

Query: 1 PRGVDKRGP 9
PRG + RGP
Sbjct: 105 PRGSEIRGP 113


>sp|RL14_IGNH4|LARGE ribosomal subunit protein uL14|Ignicoccus hospitalis (strain KIN4/I

Query: 1 PRGVDKRGP 9
PRG + RGP
Sbjct: 109 PRGSEIRGP 117


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PRGVDK 6
PRG+DK
Sbjct: 52 PRGMDK 57


>sp|RL14_METMA|LARGE ribosomal subunit protein uL14|Methanosarcina mazei (strain ATCC

Query: 1 PRGVDKRGP 9
P+G D +GP
Sbjct: 104 PKGTDIKGP 112


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 4 VDKRGPK 10
+DKR PK
Sbjct: 394 IDKRDPK 400


>sp|RL14_METAC|LARGE ribosomal subunit protein uL14|Methanosarcina acetivorans (strain

Query: 1 PRGVDKRGP 9
P+G D +GP
Sbjct: 104 PKGTDIKGP 112


>sp|RL14_KORCO|LARGE ribosomal subunit protein uL14|Korarchaeum cryptofilum (strain

Query: 1 PRGVDKRGP 9
PRG + RGP
Sbjct: 113 PRGSEFRGP 121


>sp|RL14_METBF|LARGE ribosomal subunit protein uL14|Methanosarcina barkeri (strain

Query: 1 PRGVDKRGP 9
P+G D +GP
Sbjct: 104 PKGTDIKGP 112


>sp|RL14_NATPD|LARGE ribosomal subunit protein uL14|Natronomonas pharaonis (strain ATCC

Query: 1 PRGVDKRGP 9
PRG + +GP
Sbjct: 104 PRGTELKGP 112


>sp|THSA_AERPE|THERMOSOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 PRGVDK 6
PRG+DK
Sbjct: 44 PRGLDK 49


>sp|RL14_HALWD|LARGE ribosomal subunit protein uL14|Haloquadratum walsbyi (strain DSM

Query: 1 PRGVDKRGP 9
PRG + +GP
Sbjct: 104 PRGTEIKGP 112


>sp|RL14_SACS2|LARGE ribosomal subunit protein uL14|Saccharolobus solfataricus (strain

Query: 1 PRGVDKRGP 9
P+G + RGP
Sbjct: 110 PKGTEVRGP 118


>sp|RL14_HALMA|LARGE ribosomal subunit protein uL14|Haloarcula marismortui (strain ATCC

Query: 1 PRGVDKRGP 9
PRG + +GP
Sbjct: 104 PRGTELKGP 112


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PRGVDK 6
PRG+DK
Sbjct: 51 PRGMDK 56


>sp|PSB2_PYRNV|PROTEASOME subunit beta 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GVDKRGP 9
GVD+ GP
Sbjct: 111 GVDEEGP 117


>sp|RL14_SULTO|LARGE ribosomal subunit protein uL14|Sulfurisphaera tokodaii (strain DSM

Query: 1 PRGVDKRGP 9
P+G + RGP
Sbjct: 110 PKGTEIRGP 118


>sp|RL14_HALLT|LARGE ribosomal subunit protein uL14|Halorubrum lacusprofundi (strain

Query: 1 PRGVDKRGP 9
PRG + +GP
Sbjct: 104 PRGTEIKGP 112


>sp|RL14_SULAC|LARGE ribosomal subunit protein uL14|Sulfolobus acidocaldarius (strain

Query: 1 PRGVDKRGP 9
P+G + RGP
Sbjct: 110 PKGTEVRGP 118


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 1 PRGVDK 6
PRG+DK
Sbjct: 51 PRGMDK 56


>sp|RL14_METBU|LARGE ribosomal subunit protein uL14|Methanococcoides burtonii (strain

Query: 1 PRGVDKRGP 9
P+G D +GP
Sbjct: 104 PKGTDIKGP 112


>sp|RL14_HALSA|LARGE ribosomal subunit protein uL14|Halobacterium salinarum (strain ATCC

Query: 1 PRGVDKRGP 9
PRG + +GP
Sbjct: 104 PRGTEIKGP 112


>sp|RL14_HALS3|LARGE ribosomal subunit protein uL14|Halobacterium salinarum (strain ATCC

Query: 1 PRGVDKRGP 9
PRG + +GP
Sbjct: 104 PRGTEIKGP 112




36|SequenceR|185|176|GEEFNPRGVD

>sp|KAE1B_METLZ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 EEFNPRGVD 10
EE PRGVD
Sbjct: 467 EEIEPRGVD 475


>sp|SRP54_METKA|SIGNAL recognition particle 54 kDa|Methanopyrus kandleri (strain AV19 /

Query: 2 EEFNPR 7
EEFNPR
Sbjct: 281 EEFNPR 286


>sp|THIM_PYRFU|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GEEFNPRGVD 10
GEE RGVD
Sbjct: 129 GEEGKTRGVD 138


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEFNPRGV 9
EEF PRG+
Sbjct: 614 EEFWPRGI 621


>sp|ACDA2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 4 FNPRGV 9
FNPRG+
Sbjct: 6 FNPRGI 11


>sp|THIM_PYRHO|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GEEFNPRGVD 10
GEE RGVD
Sbjct: 129 GEEGKTRGVD 138


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 EFNPRGVD 10
EF+P+G++
Sbjct: 180 EFDPKGIE 187


>sp|SPEH_ARCFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EEFNPRGV 9
++FNP GV
Sbjct: 46 KQFNPHGV 53


>sp|ARCH_SULAC|PROTEIN archease|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GEEFNP 6
GE+FNP
Sbjct: 100 GEKFNP 105


>sp|GLMS_SULAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfolobus acidocaldarius (strain

Query: 2 EEFNPRGVD 10
EEF RG+D
Sbjct: 137 EEFMKRGMD 145


>sp|RL3_METKA|LARGE ribosomal subunit protein uL3|Methanopyrus kandleri (strain AV19 /

Query: 1 GEEFNPRG 8
GEE PRG
Sbjct: 278 GEEVTPRG 285


>sp|FEN_PYRCJ|FLAP endonuclease 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GEEFNPRGV 9
G ++NP GV
Sbjct: 237 GTDYNPEGV 245


>sp|STOPP_PYRHO|MEMBRANE-BOUND protease PH1510|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EEFNPRGV 9
EE NP G+
Sbjct: 388 EELNPEGM 395


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GEEFNP 6
GEE+NP
Sbjct: 160 GEEYNP 165


>sp|FEN_NITMS|FLAP endonuclease 1|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GEEFNPRGVD 10
G +FNP G +
Sbjct: 234 GTDFNPNGFE 243


>sp|GLMS_SULTO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfurisphaera tokodaii (strain DSM

Query: 2 EEFNPRGVD 10
EEF RG+D
Sbjct: 137 EEFMKRGMD 145


>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 3 EFNPRGV 9
E+NP+G+
Sbjct: 219 EYNPKGI 225


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 1 GEEFNPRGV 9
G ++NP GV
Sbjct: 238 GTDYNPDGV 246


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 GEEFNPRG 8
GE++NP G
Sbjct: 706 GEKYNPFG 713


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 EEFNPRGV 9
EE N RGV
Sbjct: 265 EELNKRGV 272


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.16.4

Query: 2 EEFNPRGV 9
EE N RGV
Sbjct: 265 EELNKRGV 272


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.14.25

Query: 2 EEFNPRGV 9
EE N RGV
Sbjct: 265 EELNKRGV 272


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 EEFNPRGV 9
EE N RGV
Sbjct: 265 EELNKRGV 272


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 EEFNPRGV 9
EE N RGV
Sbjct: 265 EELNKRGV 272


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 EEFNPRGV 9
EE N RGV
Sbjct: 265 EELNKRGV 272


>sp|FEN_HYPBU|FLAP endonuclease 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 GEEFNPRGV 9
G ++NP GV
Sbjct: 237 GTDYNPDGV 245


>sp|FEN_PYRIL|FLAP endonuclease 1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GEEFNPRGV 9
G ++NP GV
Sbjct: 237 GTDYNPDGV 245


>sp|FEN_PYRAE|FLAP endonuclease 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GEEFNPRGV 9
G ++NP GV
Sbjct: 237 GTDYNPDGV 245


>sp|SRP54_METBF|SIGNAL recognition particle 54 kDa|Methanosarcina barkeri (strain Fusaro /

Query: 1 GEEFNPRGVD 10
GEE NP V+
Sbjct: 157 GEENNPDAVE 166


>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 1 GEEFNPRG 8
GEE P+G
Sbjct: 268 GEEITPKG 275


>sp|FEN_CENSY|FLAP endonuclease 1|Cenarchaeum symbiosum (strain A)

Query: 1 GEEFNPRGVD 10
G +FNP G +
Sbjct: 234 GTDFNPDGFE 243


>sp|FEN_METJA|FLAP endonuclease 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GEEFNPRGV 9
G ++NP GV
Sbjct: 222 GTDYNPGGV 230


>sp|FEN_PYRAR|FLAP endonuclease 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GEEFNPRGV 9
G ++NP GV
Sbjct: 237 GTDYNPDGV 245


>sp|SRP54_METMA|SIGNAL recognition particle 54 kDa|Methanosarcina mazei (strain ATCC

Query: 1 GEEFNPRGVD 10
GEE NP V+
Sbjct: 157 GEEGNPDAVE 166


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 EFNPRGVD 10
EFNP VD
Sbjct: 98 EFNPDHVD 105


>sp|FEN_SULAC|FLAP endonuclease 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GEEFNPRGV 9
G ++NP GV
Sbjct: 234 GTDYNPDGV 242


>sp|GUAAA_METST|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosphaera

Query: 2 EEFNPRGV 9
E+ NP+G+
Sbjct: 40 EQMNPKGI 47


>sp|FEN_CALMQ|FLAP endonuclease 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GEEFNPRGV 9
G ++NP G+
Sbjct: 239 GTDYNPEGI 247


>sp|SRP54_METAC|SIGNAL recognition particle 54 kDa|Methanosarcina acetivorans (strain ATCC

Query: 1 GEEFNPRGVD 10
GEE NP V+
Sbjct: 157 GEEGNPDAVE 166


>sp|FEN_SULTO|FLAP endonuclease 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GEEFNPRGV 9
G ++NP G+
Sbjct: 236 GTDYNPDGI 244




37|SequenceR|190|181|VSTPGGEEFN

>sp|PYRF_ARCFU|OROTIDINE 5'-phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 1 VSTPGGEEF 9
+S+PGGEEF
Sbjct: 113 LSSPGGEEF 121


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VSTPGGEEFN 10
V TP GEE+N
Sbjct: 155 VLTPSGEEYN 164


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSTPGGEEFN 10
+ TP GE++N
Sbjct: 1020 IKTPNGEKYN 1029


>sp|CBID_THEVO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VSTPGGEEF 9
+S P GEEF
Sbjct: 155 ISVPNGEEF 163


>sp|RL34_HYPBU|LARGE ribosomal subunit protein eL34|Hyperthermus butylicus (strain DSM

Query: 1 VSTPGGE 7
V TPGGE
Sbjct: 16 VRTPGGE 22


>sp|Y524_METJA|UNCHARACTERIZED protein MJ0524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSTPGG 6
VSTPGG
Sbjct: 117 VSTPGG 122


>sp|PGK_HALSA|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PGGEEF 9
PGG+EF
Sbjct: 64 PGGDEF 69


>sp|PGK_HALS3|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 4 PGGEEF 9
PGG+EF
Sbjct: 64 PGGDEF 69


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VSTPGGEEFN 10
+ TP GE +N
Sbjct: 1023 IKTPNGEVYN 1032


>sp|SECE_HALSA|PROTEIN translocase subunit SecE|Halobacterium salinarum (strain ATCC

Query: 2 STPGGEEFN 10
STP EEF+
Sbjct: 18 STPSWEEFS 26


>sp|SECE_HALS3|PROTEIN translocase subunit SecE|Halobacterium salinarum (strain ATCC

Query: 2 STPGGEEFN 10
STP EEF+
Sbjct: 18 STPSWEEFS 26


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 2 STPGGEEFN 10
S P GE+FN
Sbjct: 49 SNPMGEDFN 57


>sp|LYSK_SULAC|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VSTPGGEEF 9
+ TP GEE+
Sbjct: 22 IYTPSGEEY 30


>sp|PGK_NATPD|PHOSPHOGLYCERATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 PGGEEFN 10
PGG+EF+
Sbjct: 62 PGGDEFS 68


>sp|CBID_THEAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VSTPGGEEF 9
+S PGGE+
Sbjct: 144 ISVPGGEDL 152


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 VSTPGGEEF 9
VS PG E F
Sbjct: 368 VSVPGNEMF 376


>sp|HYPA_METM6|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C6 /

Query: 1 VSTPGGEEFN 10
V GG+EFN
Sbjct: 105 VKLKGGKEFN 114


>sp|HYPA_METM5|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C5 /

Query: 1 VSTPGGEEFN 10
V GG+EFN
Sbjct: 105 VKLKGGKEFN 114


>sp|CBID_METTH|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanothermobacter thermautotrophicus

Query: 1 VSTPGGEEF 9
VS PGGE
Sbjct: 141 VSVPGGERI 149


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 5 GGEEFN 10
GGE+FN
Sbjct: 931 GGEDFN 936


>sp|SECE_HALMA|PROTEIN translocase subunit SecE|Haloarcula marismortui (strain ATCC

Query: 2 STPGGEEFN 10
STP EEF+
Sbjct: 18 STPSWEEFS 26


>sp|HYPA_METM7|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C7 /

Query: 1 VSTPGGEEFN 10
V GG+EFN
Sbjct: 105 VKLKGGKEFN 114


>sp|CREN7_SULAC|CHROMATIN protein Cren7|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VSTPGGEEF 9
V TPGG+E
Sbjct: 9 VRTPGGKEL 17


>sp|HYPA_METVS|HYDROGENASE maturation factor HypA|Methanococcus vannielii (strain ATCC 35089

Query: 1 VSTPGGEEFN 10
V GG+EFN
Sbjct: 105 VRIKGGKEFN 114


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VSTPGGEEFN 10
V TP GEE +
Sbjct: 155 VITPSGEEHD 164


>sp|RL34_METS3|LARGE ribosomal subunit protein eL34|Methanobrevibacter smithii (strain

Query: 2 STPGGE 7
+TPGGE
Sbjct: 17 NTPGGE 22


>sp|HYPA_METMP|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain DSM 14266

Query: 1 VSTPGGEEFN 10
+ GG+EFN
Sbjct: 105 IKLKGGKEFN 114


>sp|CREN7_METS5|CHROMATIN protein Cren7|Metallosphaera sedula (strain ATCC 51363

Query: 1 VSTPGGEE 8
+ TPGG+E
Sbjct: 9 IKTPGGKE 16


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GGEEFN 10
GGE+FN
Sbjct: 135 GGEKFN 140


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VSTPGGEEF 9
V PGGEE
Sbjct: 257 VIRPGGEEL 265


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VSTPGGEEF 9
V PGGEE
Sbjct: 257 VIRPGGEEL 265


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PGGEEF 9
PGGE F
Sbjct: 306 PGGEHF 311




38|SequenceR|195|186|EHKRGVSTPG

>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC

Query: 2 HKRGVSTP 9
HKRGV +P
Sbjct: 64 HKRGVDSP 71


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 3 KRGVSTPG 10
+RGVS PG
Sbjct: 112 ERGVSAPG 119


>sp|Y1227_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 1 EHKRGVS 7
EHKRG++
Sbjct: 44 EHKRGMT 50


>sp|MOAA_ARCFU|PROBABLE GTP 3',8-cyclase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HKRGVSTPG 10
HK G S PG
Sbjct: 29 HKEGESNPG 37


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 KRGVSTPG 10
+RGVS PG
Sbjct: 109 ERGVSAPG 116


>sp|ALDC_METMA|ALPHA-ACETOLACTATE decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EHKRGVSTPG 10
E+ +GV+ PG
Sbjct: 217 EYVKGVNVPG 226


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 4 RGVSTPG 10
RGVS PG
Sbjct: 104 RGVSAPG 110


>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 2 HKRGVSTP 9
HK+GV +P
Sbjct: 64 HKKGVDSP 71


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EHKRGVSTPG 10
E +RG TPG
Sbjct: 552 EFQRGDGTPG 561


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 2 HKRGVSTP 9
++RGV TP
Sbjct: 377 YQRGVETP 384


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 KRGVSTPG 10
+RGV+ PG
Sbjct: 106 ERGVTAPG 113


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 3 KRGVSTPG 10
KRG+ PG
Sbjct: 299 KRGIKDPG 306


>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 4 RGVSTPG 10
RG+ TPG
Sbjct: 254 RGMKTPG 260


>sp|RL37A_THESM|LARGE ribosomal subunit protein eL43|Thermococcus sibiricus (strain DSM

Query: 3 KRGVSTP 9
KRG+S+P
Sbjct: 79 KRGISSP 85




39|SequenceR|200|191|ESRIFEHKRG

>sp|DYR1_HALMA|DIHYDROFOLATE reductase 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 SRIFEHKRG 10
SRI EH G
Sbjct: 139 SRIHEHNEG 147


>sp|K6PF_METJA|BIFUNCTIONAL ADP-specific glucokinase/phosphofructokinase|Methanocaldococcus

Query: 2 SRIFEHKRG 10
+RIFE K+G
Sbjct: 172 NRIFEFKKG 180


>sp|Y599_METJA|UNCHARACTERIZED protein MJ0599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESRIFEHKRG 10
E RI+ K+G
Sbjct: 148 EDRIYSQKKG 157


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 1 ESRIFEHKRG 10
E IF++KRG
Sbjct: 552 EIAIFDYKRG 561


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SRIFEHKR 9
SR+F HK+
Sbjct: 736 SRLFGHKK 743


>sp|Y1227_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 4 IFEHKRG 10
+ EHKRG
Sbjct: 42 MLEHKRG 48


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SRIFEHK 8
+R+F+HK
Sbjct: 107 ARVFDHK 113


>sp|APE1_AERPE|HOMING endonuclease I-ApeI|Aeropyrum pernix (strain ATCC 700893

Query: 3 RIFEHKRG 10
R++++KRG
Sbjct: 54 RVYQYKRG 61


>sp|KADA_PYRAE|ADENYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ESRIFEH 7
ESR FEH
Sbjct: 172 ESRPFEH 178


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SRIFEHKRG 10
SRI + KRG
Sbjct: 421 SRIVDEKRG 429




40|SequenceR|205|196|RWNESESRIF

>sp|DAPF_METM7|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C7 /

Query: 2 WNESESRIF 10
WNES++ I+
Sbjct: 254 WNESDNHIY 262


>sp|DAPF_METM6|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C6 /

Query: 2 WNESESRIF 10
WNES++ I+
Sbjct: 254 WNESDNHIY 262


>sp|OTC_CENSY|ORNITHINE carbamoyltransferase|Cenarchaeum symbiosum (strain A)

Query: 2 WNESESRI 9
W+E+E+R+
Sbjct: 282 WDEAENRL 289


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 WNESESRI 9
W+E+E+R+
Sbjct: 292 WDEAENRL 299


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WNESESRI 9
W+E+E+R+
Sbjct: 292 WDEAENRL 299


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WNESESRIF 10
W+++E+R++
Sbjct: 289 WDQAENRLY 297


>sp|RL11_SULTO|LARGE ribosomal subunit protein uL11|Sulfurisphaera tokodaii (strain DSM

Query: 1 RWNESE 6
+WNE+E
Sbjct: 164 KWNEAE 169


>sp|RL11_SULAC|LARGE ribosomal subunit protein uL11|Sulfolobus acidocaldarius (strain

Query: 1 RWNESE 6
+WNE+E
Sbjct: 164 KWNEAE 169


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WNESESRIF 10
W+++E+R++
Sbjct: 288 WDQAENRLY 296


>sp|RL31_DESA1|LARGE ribosomal subunit protein eL31|Desulfurococcus amylolyticus

Query: 3 NESESRIF 10
NE E+R+F
Sbjct: 80 NEKEARVF 87


>sp|RL40_THEKO|LARGE ribosomal subunit protein eL40|Thermococcus kodakarensis (strain

Query: 1 RWNESESRIF 10
R+ E+E+RIF
Sbjct: 3 RFPEAEARIF 12


>sp|RL40_PYRFU|LARGE ribosomal subunit protein eL40|Pyrococcus furiosus (strain ATCC

Query: 1 RWNESESRIF 10
R+ E+E+RIF
Sbjct: 3 RFPEAEARIF 12


>sp|RL40_THEGJ|LARGE ribosomal subunit protein eL40|Thermococcus gammatolerans (strain

Query: 1 RWNESESRIF 10
R+ E+E+RIF
Sbjct: 3 RFPEAEARIF 12


>sp|RL40_METTH|LARGE ribosomal subunit protein eL40|Methanothermobacter

Query: 1 RWNESESRIF 10
R+ E+E+R+F
Sbjct: 3 RFEEAENRLF 12


>sp|RL40_THEON|LARGE ribosomal subunit protein eL40|Thermococcus onnurineus (strain

Query: 1 RWNESESRIF 10
R+ E+E+RIF
Sbjct: 3 RFPEAEARIF 12


>sp|RL40_METS3|LARGE ribosomal subunit protein eL40|Methanobrevibacter smithii (strain

Query: 1 RWNESESRIF 10
R+ E+E+R+F
Sbjct: 3 RFEEAENRMF 12


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WNESESRI 9
WN++ SR+
Sbjct: 755 WNQAGSRV 762


>sp|RL40_PYRHO|LARGE ribosomal subunit protein eL40|Pyrococcus horikoshii (strain ATCC

Query: 1 RWNESESRIF 10
R+ E+E+RIF
Sbjct: 3 RFPEAEARIF 12


>sp|RL40_PYRAB|LARGE ribosomal subunit protein eL40|Pyrococcus abyssi (strain GE5 /

Query: 1 RWNESESRIF 10
R+ E+E+RIF
Sbjct: 3 RFPEAEARIF 12


>sp|OTC_SULAC|ORNITHINE carbamoyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WNESESRIF 10
W+++E+R++
Sbjct: 288 WDQAENRLY 296




41|SequenceR|210|201|EERFIRWNES

>sp|MFNA_METHJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanospirillum hungatei

Query: 1 EERFIRW 7
E+R IRW
Sbjct: 65 EDRLIRW 71


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 RFIRWNE 9
RFIRW +
Sbjct: 561 RFIRWRD 567


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RFIRWNE 9
RFIRW +
Sbjct: 561 RFIRWRD 567


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 RFIRWNE 9
RFIRW +
Sbjct: 561 RFIRWRD 567


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 RFIRWNE 9
RFIRW +
Sbjct: 561 RFIRWRD 567


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 RFIRWNE 9
RFIRW +
Sbjct: 561 RFIRWRD 567


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 RFIRWNE 9
RFIRW +
Sbjct: 561 RFIRWRD 567


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 RFIRWNE 9
RFIRW +
Sbjct: 561 RFIRWRD 567


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 RFIRWNE 9
RFIRW +
Sbjct: 561 RFIRWRD 567


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 RFIRWNE 9
RFIRW +
Sbjct: 561 RFIRWRD 567


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 RFIRW 7
RFIRW
Sbjct: 561 RFIRW 565


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 RFIRW 7
RFIRW
Sbjct: 565 RFIRW 569


>sp|NADK_METKA|NAD kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 EERFIRWN 8
+E+F+RW+
Sbjct: 269 KEKFLRWD 276


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 RFIRWNE 9
RFIRW +
Sbjct: 561 RFIRWRD 567


>sp|ARLY_PYRCJ|ARGININOSUCCINATE lyase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 FIRWN 8
FIRWN
Sbjct: 250 FIRWN 254


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RFIRW 7
RFIRW
Sbjct: 560 RFIRW 564


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RFIRWNE 9
RFIRW +
Sbjct: 565 RFIRWRD 571


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 3 RFIRW 7
RFIRW
Sbjct: 566 RFIRW 570


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 RFIRWNE 9
RFIRW +
Sbjct: 559 RFIRWRD 565


>sp|ARLY_PYRAR|ARGININOSUCCINATE lyase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 FIRWN 8
FIRWN
Sbjct: 250 FIRWN 254


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 RFIRW 7
RFIRW
Sbjct: 569 RFIRW 573


>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 FIRWN 8
FIRWN
Sbjct: 250 FIRWN 254


>sp|DAPF_METM6|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C6 /

Query: 5 IRWNES 10
I WNES
Sbjct: 252 IEWNES 257


>sp|DAPF_METM7|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C7 /

Query: 5 IRWNES 10
I WNES
Sbjct: 252 IEWNES 257


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC

Query: 1 EERFIRWNES 10
E+R + W+ES
Sbjct: 6 EDRMLGWDES 15


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RFIRWNE 9
RFI+W E
Sbjct: 4 RFIKWFE 10


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 RFIRWNE 9
RFI+W E
Sbjct: 4 RFIKWFE 10


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ERFIRW 7
ERF++W
Sbjct: 154 ERFVQW 159


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EERFIRWNE 9
EE FI W +
Sbjct: 148 EENFIYWED 156


>sp|ARLY_PYRNV|ARGININOSUCCINATE lyase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 FIRWN 8
FIRWN
Sbjct: 250 FIRWN 254


>sp|GYAR_AERPE|GLYOXYLATE reductase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ERFIRWNE 9
+ F+RW E
Sbjct: 124 DHFVRWGE 131


>sp|RNP4_AERPE|RIBONUCLEASE P protein component 4|Aeropyrum pernix (strain ATCC 700893

Query: 1 EERFIRW 7
EER RW
Sbjct: 20 EERLARW 26




42|SequenceR|215|206|DEGNQEERFI

>sp|HPPA_PYRAE|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Pyrobaculum aerophilum

Query: 1 DEGNQEERFI 10
D GN++ RFI
Sbjct: 32 DPGNEKMRFI 41


>sp|GLNB2_METTL|NITROGEN fixation nifHD region GlnB-like|Methanothermococcus

Query: 1 DEGNQEERFI 10
+EG +E RFI
Sbjct: 58 EEGEKEGRFI 67




43|SequenceR|220|211|WGGDEDEGNQ

>sp|NADE_METB6|NH(3)-DEPENDENT NAD(+) synthetase|Methanoregula boonei (strain DSM 21154

Query: 1 WGGDEDEG 8
W G DEG
Sbjct: 189 WAGQSDEG 196


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WGGDEDEGNQ 10
+GGDE+E +
Sbjct: 201 YGGDEEEARK 210


>sp|MTTB1_METAC|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina acetivorans (strain ATCC

Query: 1 WGGDEDEGNQ 10
+GGDE+E +
Sbjct: 201 YGGDEEEARK 210


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 1 WGGDEDEGNQ 10
+GGDE+E +
Sbjct: 201 YGGDEEEARK 210


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 1 WGGDEDEGNQ 10
+GGDE+E +
Sbjct: 201 YGGDEEEARK 210


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 1 WGGDEDEGNQ 10
+GGDE+E +
Sbjct: 201 YGGDEEEARK 210


>sp|MTTB2_METMA|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WGGDEDEGNQ 10
+GGDE+E +
Sbjct: 201 YGGDEEEARK 210


>sp|Y1008_ARCFU|UNCHARACTERIZED protein AF_1008|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DEDEGNQ 10
DED GNQ
Sbjct: 17 DEDPGNQ 23


>sp|SYC_ARCFU|CYSTEINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GDEDEGNQ 10
GD EGNQ
Sbjct: 339 GDRKEGNQ 346


>sp|MTTB_METTE|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina thermophila

Query: 1 WGGDEDEGNQ 10
+GGDE+E +
Sbjct: 201 YGGDEEEARK 210


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 WGGDEDE 7
+GGDED+
Sbjct: 540 FGGDEDK 546


>sp|Y1450_THEGJ|PROTEIN TGAM_1450|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WGGDEDE 7
WG DE+E
Sbjct: 153 WGWDEEE 159


>sp|ARLY_SACS2|ARGININOSUCCINATE lyase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WGGDEDE 7
WG ++DE
Sbjct: 6 WGSEKDE 12


>sp|Y174_THEKO|PROTEIN TK0174|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WGGDEDE 7
WG DE+E
Sbjct: 153 WGWDEEE 159


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGDEDEGN 9
GD DEG+
Sbjct: 496 AGDSDEGD 503


>sp|Y1979_PYRFU|PROTEIN PF1979|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WGGDEDE 7
WG DE+E
Sbjct: 153 WGWDEEE 159


>sp|Y010_PYRHO|PROTEIN PH0010|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WGGDEDE 7
WG DE+E
Sbjct: 154 WGWDEEE 160


>sp|Y010_PYRAB|PROTEIN PYRAB00100|Pyrococcus abyssi (strain GE5 /

Query: 1 WGGDEDE 7
WG DE+E
Sbjct: 153 WGWDEEE 159


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WGGDED 6
WG D+D
Sbjct: 6 WGSDKD 11


>sp|Y1965_THEON|PROTEIN TON_1965|Thermococcus onnurineus (strain NA1)

Query: 1 WGGDEDE 7
WG DE+E
Sbjct: 153 WGWDEEE 159


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 WGGDEDEG 8
W GD D G
Sbjct: 434 WSGDNDCG 441


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 WGGDEDEG 8
W GD D G
Sbjct: 434 WSGDNDCG 441


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WGGDEDEG 8
W GD D G
Sbjct: 434 WSGDNDCG 441




44|SequenceR|225|216|SGALRWGGDE

>sp|FLPA_PYRAR|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum arsenaticum (strain

Query: 4 LRWGGDE 10
++WGGDE
Sbjct: 46 IKWGGDE 52


>sp|FLPA_PYRAE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum aerophilum (strain

Query: 4 LRWGGDE 10
++WGGDE
Sbjct: 46 IKWGGDE 52


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 5 RWGGDE 10
RWGG+E
Sbjct: 46 RWGGEE 51


>sp|TRM56_ARCFU|TRNA (cytidine(56)-2'-O)-methyltransferase|Archaeoglobus fulgidus

Query: 5 RWGGD 9
RWGGD
Sbjct: 53 RWGGD 57


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GALRWGGDE 10
GAL W GD+
Sbjct: 330 GALYWLGDD 338


>sp|XERA_THEKO|TYROSINE recombinase XerA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LRWGGD 9
L WGGD
Sbjct: 36 LEWGGD 41


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GALRWGG 8
GAL WGG
Sbjct: 228 GALVWGG 234


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GALRWGG 8
GAL WGG
Sbjct: 229 GALVWGG 235


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GALRWGG 8
GAL WGG
Sbjct: 228 GALVWGG 234


>sp|TRM56_METAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina acetivorans

Query: 5 RWGGD 9
RWGGD
Sbjct: 54 RWGGD 58


>sp|TRM56_METBU|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcoides burtonii

Query: 3 ALRWGGD 9
A RWGGD
Sbjct: 52 AERWGGD 58


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 1 SGALRWGGD 9
+GA R+GGD
Sbjct: 104 AGATRFGGD 112


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 1 SGALRWGG 8
+G L WGG
Sbjct: 230 NGCLAWGG 237


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 1 SGALRWGG 8
+G L WGG
Sbjct: 230 NGCLAWGG 237


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 1 SGALRWGG 8
+G L WGG
Sbjct: 230 NGCLAWGG 237


>sp|BACS3_HALMA|SENSORY rhodopsin III|Haloarcula marismortui (strain ATCC 43049

Query: 1 SGALRW 6
SG+LRW
Sbjct: 119 SGSLRW 124


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 1 SGALRWGGDE 10
+GA++W G E
Sbjct: 269 TGAIKWDGKE 278


>sp|TRM56_METMJ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoculleus marisnigri

Query: 3 ALRWGGD 9
A RWGGD
Sbjct: 52 ASRWGGD 58


>sp|Y1731_ARCFU|UNCHARACTERIZED protein AF_1731|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 RWGGDE 10
RWG DE
Sbjct: 20 RWGADE 25


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 LRWGGD 9
+ WGGD
Sbjct: 304 VEWGGD 309


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SGALRWGG 8
+G L WGG
Sbjct: 230 NGCLVWGG 237


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SGALRWGG 8
+G L WGG
Sbjct: 230 NGCLVWGG 237




45|SequenceR|230|221|EGDRRSGALR

>sp|DGGGP_SULAC|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EGDRRSG 7
EGD+R+G
Sbjct: 180 EGDKRNG 186


>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 2 GDRRSGAL 9
GD+R GAL
Sbjct: 280 GDKRIGAL 287


>sp|RS28_AERPE|SMALL ribosomal subunit protein eS28|Aeropyrum pernix (strain ATCC

Query: 1 EGDRRSGAL 9
EG++RSG +
Sbjct: 5 EGEKRSGVI 13


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 4 RRSGALR 10
RR+GALR
Sbjct: 202 RRTGALR 208


>sp|MFNB_METKA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 GDRRSGALR 10
GDR GA+R
Sbjct: 217 GDRNRGAIR 225


>sp|CAS6_HALMT|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax mediterranei (strain ATCC 33500

Query: 1 EGDRRS 6
EGDRRS
Sbjct: 61 EGDRRS 66




46|SequenceR|235|226|HPRWREGDRR

>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 HPRWREGDRR 10
HP W G RR
Sbjct: 980 HPIWHAGQRR 989


>sp|LYSJ_PYRHO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 HPRWREGDR 9
HP W EG R
Sbjct: 42 HPEWVEGIR 50


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 HPRWREGDR 9
HPRW E DR
Sbjct: 353 HPRW-ESDR 360


>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 4 WREGDRR 10
W EGDR+
Sbjct: 64 WHEGDRK 70


Query: 2 PRWREGD 8
P W EG+
Sbjct: 200 PHWNEGN 206


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 4 WREGDRR 10
W EGDR+
Sbjct: 64 WHEGDRK 70


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 3 RWREGDRR 10
+W+ GDR+
Sbjct: 489 KWKNGDRK 496


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RWREGDRR 10
RW+ GD++
Sbjct: 481 RWKNGDKK 488


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 2 PRWREG 7
PRWR G
Sbjct: 311 PRWRRG 316


>sp|SIHH_METJA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WREGDRR 10
W+EG+R+
Sbjct: 10 WKEGERK 16


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 4 WREGDRR 10
W+ GD+R
Sbjct: 482 WKNGDKR 488


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 WREGDR 9
WREGDR
Sbjct: 543 WREGDR 548


>sp|CDPAS_THEGJ|CDP-ARCHAEOL synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 RWREGDR 9
+WR+G+R
Sbjct: 38 KWRDGNR 44


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 4 WREGDRR 10
W EGD++
Sbjct: 64 WHEGDKK 70


Query: 2 PRWREGD 8
P W +GD
Sbjct: 200 PYWNDGD 206


>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 4 WREGDR 9
WR GDR
Sbjct: 27 WRPGDR 32


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 4 WREGD 8
WREGD
Sbjct: 167 WREGD 171


>sp|TRKA2_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 1 HPRWRE 6
HP W+E
Sbjct: 90 HPGWKE 95


>sp|Y921_METJA|UNCHARACTERIZED protein MJ0921|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WREGDR 9
WREG++
Sbjct: 49 WREGNK 54


>sp|RL30E_PYRNV|LARGE ribosomal subunit protein eL30|Pyrobaculum neutrophilum (strain

Query: 2 PRWREGD 8
P+W GD
Sbjct: 43 PKWARGD 49


>sp|COBD_AERPE|PROBABLE cobalamin biosynthesis protein CobD|Aeropyrum pernix (strain ATCC

Query: 1 HPRWREG 7
+P WR+G
Sbjct: 285 YPGWRDG 291


>sp|CBIA_METTH|COBYRINATE a,c-diamide synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 HPRWREGDRR 10
P W+ G+R+
Sbjct: 235 QPLWQRGNRK 244


>sp|MOAA_THEVO|PROBABLE GTP 3',8-cyclase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PRWREGD 8
P WR GD
Sbjct: 302 PYWRPGD 308


>sp|FENR_IGNH4|FERREDOXIN--NADP reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 WREGDR 9
W+EGD+
Sbjct: 86 WKEGDK 91


>sp|LYSJ_PYRAB|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 HPRWRE 6
HP+W E
Sbjct: 42 HPKWVE 47


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PRWREGDRR 10
P +EGDRR
Sbjct: 382 PMEKEGDRR 390


>sp|NIKR_THEON|PUTATIVE nickel-responsive regulator|Thermococcus onnurineus (strain NA1)

Query: 4 WREGDR 9
W EGDR
Sbjct: 47 WEEGDR 52


>sp|GPI_THEKO|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HPRWRE 6
+PRW+E
Sbjct: 184 NPRWKE 189


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PRWRE 6
PRW+E
Sbjct: 114 PRWKE 118


>sp|NIKR_THESM|PUTATIVE nickel-responsive regulator|Thermococcus sibiricus (strain DSM

Query: 4 WREGDR 9
W EGD+
Sbjct: 47 WEEGDK 52


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain

Query: 2 PRWREGDR 9
PR RE DR
Sbjct: 68 PRVRESDR 75


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 PRWREGDR 9
PR RE DR
Sbjct: 68 PRVRESDR 75


>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PRWREGD 8
P W +GD
Sbjct: 19 PEWAKGD 25


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 WREGDR 9
W EGDR
Sbjct: 277 WCEGDR 282


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 2 PRWRE 6
PRW+E
Sbjct: 114 PRWKE 118




47|SequenceR|240|231|PGDPSHPRWR

>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 1 PGDPSHP 7
PGDPSHP
Sbjct: 214 PGDPSHP 220


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 1 PGDPSHPRW 9
PG P+HP W
Sbjct: 225 PGCPAHPDW 233


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 1 PGDPSHPRW 9
PG P HP W
Sbjct: 225 PGCPCHPDW 233


>sp|CARA_THEAC|CARBAMOYL phosphate synthase small chain|Thermoplasma acidophilum (strain

Query: 1 PGDPSHPRWR 10
PGDP HP R
Sbjct: 214 PGDPDHPSLR 223


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 3 DPSHPRWR 10
+P H RWR
Sbjct: 273 EPLHARWR 280


>sp|CBID_METBF|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DPSHPRWR 10
DP HPR +
Sbjct: 300 DPEHPRLK 307


>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PSHPRWR 10
P HP W+
Sbjct: 80 PEHPTWK 86


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GDPSHPRWR 10
DP+H R+R
Sbjct: 176 ADPAHKRYR 184


>sp|TFE_PYRAB|TRANSCRIPTION factor E|Pyrococcus abyssi (strain GE5 /

Query: 2 GDPSHPR 8
G+P HP+
Sbjct: 117 GNPEHPK 123


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DPSHPRW 9
DP H RW
Sbjct: 215 DPGHFRW 221


>sp|TFE_PYRHO|TRANSCRIPTION factor E|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GDPSHPR 8
G+P HP+
Sbjct: 117 GNPDHPK 123


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 2 GDPSHP 7
GDPSHP
Sbjct: 47 GDPSHP 52


>sp|RS4_NITMS|SMALL ribosomal subunit protein uS4|Nitrosopumilus maritimus (strain

Query: 2 GDPSHPR--WR 10
GDP +PR WR
Sbjct: 2 GDPKYPRRVWR 12


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 6 HPRW 9
HPRW
Sbjct: 353 HPRW 356


>sp|GYAR_THEKO|GLYOXYLATE reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 HPRW 9
HPRW
Sbjct: 139 HPRW 142


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GDPSHPRWR 10
G PSHP R
Sbjct: 120 GPPSHPHAR 128


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GDPSHPRWR 10
GDP RW+
Sbjct: 306 GDPQDIRWQ 314


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 2 GDPSHPRW 9
GD S P W
Sbjct: 66 GDESRPGW 73


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGDPSHPRWR 10
P D HPR R
Sbjct: 448 PTDAIHPRRR 457


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 3 DPSHPRWR 10
D HP W+
Sbjct: 301 DTIHPEWQ 308


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGDPSHPRW 9
PG+ HP +
Sbjct: 217 PGEKKHPHF 225


>sp|RNH2_PYRFU|RIBONUCLEASE HII|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGDPSHPRW 9
P DP +W
Sbjct: 171 PSDPKTKKW 179


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum (strain

Query: 1 PGDPSHPRWR 10
P P H RW+
Sbjct: 236 PWTPHHVRWQ 245


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PSHPRWR 10
P HP W+
Sbjct: 339 PPHPVWQ 345


>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 3 DPSHP 7
DPSHP
Sbjct: 403 DPSHP 407


>sp|Y1534_PYRCJ|UPF0284 protein Pcal_1534|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GDPSHP 7
GDP HP
Sbjct: 200 GDPVHP 205


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PGDPSHPRW 9
P +P H RW
Sbjct: 123 PEEPDHDRW 131


>sp|RL3_METB6|LARGE ribosomal subunit protein uL3|Methanoregula boonei (strain DSM

Query: 1 PGDPSHPRW 9
P +P H RW
Sbjct: 240 PWNPHHVRW 248


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 DPSHPR 8
+PSHPR
Sbjct: 266 NPSHPR 271


>sp|Y637_METTH|UPF0235 protein MTH_637|Methanothermobacter thermautotrophicus (strain

Query: 2 GDPSHPRWR 10
G PS+ WR
Sbjct: 28 GIPSYNEWR 36


>sp|GPMA_METB6|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanoregula boonei (strain DSM 21154

Query: 3 DPSHPRW 9
DP HPR+
Sbjct: 128 DPRHPRF 134


>sp|QUEE_HYPBU|7-CARBOXY-7-DEAZAGUANINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PGDPSHPRW 9
PG HP W
Sbjct: 144 PGAKLHPSW 152


>sp|GPMA_METPE|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 3 DPSHPRW 9
DP HPR+
Sbjct: 128 DPRHPRF 134


>sp|RL15E_METBU|LARGE ribosomal subunit protein eL15|Methanococcoides burtonii (strain

Query: 3 DPSHP 7
DPSHP
Sbjct: 136 DPSHP 140




48|SequenceR|245|236|WGASRPGDPS

>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 SRPGDPS 10
SRPGDPS
Sbjct: 513 SRPGDPS 519


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WGASRPGDPS 10
W A++PG+PS
Sbjct: 182 WKAAKPGEPS 191


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WGASRPGDPS 10
WG PG+P+
Sbjct: 231 WGVRFPGEPN 240


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 WGASRPGDP 9
W A +PG+P
Sbjct: 179 WKAYKPGEP 187


Query: 1 WGASRPG 7
WG RPG
Sbjct: 193 WGKGRPG 199


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 WGASRPGDP 9
W A +PG+P
Sbjct: 181 WKARKPGEP 189


Query: 1 WGASRPG 7
WG RPG
Sbjct: 195 WGPGRPG 201


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 1 WGASRPGDP 9
W A R GDP
Sbjct: 156 WEAYREGDP 164


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WGASRPGDP 9
W A +PG+P
Sbjct: 184 WKAWKPGEP 192


Query: 1 WGASRPG 7
WG RPG
Sbjct: 198 WGKGRPG 204


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WGASRPG 7
WG RPG
Sbjct: 196 WGEGRPG 202


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 WGASRPG 7
WG RPG
Sbjct: 198 WGEGRPG 204


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 WGASRPGDP 9
W A +PG+P
Sbjct: 184 WKAWKPGEP 192


Query: 1 WGASRPG 7
WG RPG
Sbjct: 198 WGKGRPG 204


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WGASRPG 7
WG RPG
Sbjct: 197 WGEGRPG 203


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 WGASRPG 7
WG RPG
Sbjct: 198 WGEGRPG 204


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WGASRPG 7
WG RPG
Sbjct: 198 WGEGRPG 204


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WGASRPGDP 9
W A +PG+P
Sbjct: 182 WKAWKPGEP 190


Query: 1 WGASRPG 7
WG RPG
Sbjct: 196 WGKGRPG 202


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WGASRPG 7
WG RPG
Sbjct: 198 WGEGRPG 204


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WGASRPG 7
WG RPG
Sbjct: 198 WGEGRPG 204


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WGASRPG 7
WG RPG
Sbjct: 196 WGPGRPG 202


>sp|SYC_ARCFU|CYSTEINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WGASRPG 7
WG RPG
Sbjct: 200 WGRGRPG 206


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WGASRPGDP 9
W A +PG+P
Sbjct: 183 WKAWKPGEP 191


Query: 1 WGASRPG 7
WG RPG
Sbjct: 197 WGKGRPG 203


>sp|Y1234_STAMF|UPF0200 protein Smar_1234|Staphylothermus marinus (strain ATCC 43588

Query: 4 SRPGDP 9
+RPGDP
Sbjct: 124 NRPGDP 129


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 1 WGASRP 6
WGAS+P
Sbjct: 235 WGASQP 240


>sp|HEM3_SACI7|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 4 SRPGDP 9
S+PGDP
Sbjct: 266 SKPGDP 271


>sp|HEM3_SACI6|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 SRPGDP 9
S+PGDP
Sbjct: 266 SKPGDP 271


>sp|HEM3_SACI4|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.14.25

Query: 4 SRPGDP 9
S+PGDP
Sbjct: 266 SKPGDP 271


>sp|HEM3_SACI3|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.27)

Query: 4 SRPGDP 9
S+PGDP
Sbjct: 266 SKPGDP 271


>sp|HEM3_SACI2|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain L.S.2.15

Query: 4 SRPGDP 9
S+PGDP
Sbjct: 266 SKPGDP 271


>sp|HEM3_SACI1|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 4 SRPGDP 9
S+PGDP
Sbjct: 266 SKPGDP 271


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 SRPGDPS 10
SRPG PS
Sbjct: 508 SRPGRPS 514


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 SRPGDPS 10
SRPG PS
Sbjct: 508 SRPGRPS 514


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 SRPGDPS 10
SRPG PS
Sbjct: 508 SRPGRPS 514


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 SRPGDPS 10
SRPG PS
Sbjct: 508 SRPGRPS 514


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WGASRPG 7
WG RPG
Sbjct: 202 WGKIRPG 208


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WGASRPG 7
WG RPG
Sbjct: 202 WGKIRPG 208


>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WGASRPG 7
WG RPG
Sbjct: 202 WGKIRPG 208


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 SRPGDPS 10
SRPG PS
Sbjct: 512 SRPGRPS 518


>sp|RNH2_METVS|RIBONUCLEASE HII|Methanococcus vannielii (strain ATCC 35089

Query: 2 GASRPGDP 9
G+ PGDP
Sbjct: 193 GSGYPGDP 200


>sp|ALADH_ARCFU|ALANINE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WGASRPGDP 9
W S PG+P
Sbjct: 66 WVNSHPGNP 74


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WGASRPG 7
WG RPG
Sbjct: 218 WGEGRPG 224


>sp|PDAD1_ARCFU|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Archaeoglobus fulgidus (strain ATCC

Query: 2 GASRPGDPS 10
GA+ P DPS
Sbjct: 86 GAAIPPDPS 94


>sp|MUTL_HALSA|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 2 GASRPGD 8
GAS+PGD
Sbjct: 342 GASKPGD 348


>sp|MUTL_HALS3|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 2 GASRPGD 8
GAS+PGD
Sbjct: 342 GASKPGD 348


>sp|RUBPP_HALXS|RIBULOSE-1,5-BISPHOSPHATE 5-phosphatase|Halopiger xanaduensis (strain DSM 18323

Query: 2 GASRPGD 8
G+ RPGD
Sbjct: 80 GSPRPGD 86


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 6 PGDPS 10
PGDPS
Sbjct: 214 PGDPS 218


>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 2 GASRPGDP 9
G +RPG P
Sbjct: 262 GGTRPGAP 269


>sp|CARA_METTH|CARBAMOYL phosphate synthase small chain|Methanothermobacter

Query: 3 ASRPGDPS 10
+S PGDP+
Sbjct: 222 SSGPGDPT 229


>sp|SYC_HALSA|CYSTEINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WGASRPG 7
WG RPG
Sbjct: 219 WGEGRPG 225


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WGASRPGDP 9
WG PG P
Sbjct: 376 WGYLEPGVP 384




49|SequenceR|250|241|EMHERWGASR

>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EMHERWG 7
EMHER+G
Sbjct: 218 EMHERYG 224


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 MHERWGAS 9
M E WGAS
Sbjct: 1 MRESWGAS 8


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EMHERWGA 8
++HE WGA
Sbjct: 217 KIHEDWGA 224


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EMHERWGAS 9
++HE WG++
Sbjct: 219 KLHEDWGST 227


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 EMHERWGAS 9
E HE+W +S
Sbjct: 17 EAHEKWRSS 25


>sp|Y870_ARCFU|UNCHARACTERIZED protein AF_0870|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EMHERWG 7
E H +WG
Sbjct: 2 ESHHKWG 8


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EMHERWGAS 9
++HE WG++
Sbjct: 219 KLHEDWGST 227


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 EMHERWGAS 9
++HE WG++
Sbjct: 217 KLHEDWGST 225


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 1 EMHERWGASR 10
E H+RW R
Sbjct: 364 ESHDRWSGIR 373


>sp|COFG_METKA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 MHERWG 7
MHER+G
Sbjct: 193 MHERYG 198


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 EMHERW 6
E+HE+W
Sbjct: 286 EVHEKW 291


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 700922

Query: 1 EMHERWGASR 10
+MH+ W R
Sbjct: 189 QMHQEWPVRR 198


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 1 EMHERWGASR 10
+MH+ W R
Sbjct: 189 QMHQEWPVRR 198


>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 EMHERWGASR 10
E+H R GA+R
Sbjct: 6 EVHARDGAAR 15


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 HERWGAS 9
H+RWG +
Sbjct: 128 HDRWGTA 134


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 2 MHERW 6
MH+RW
Sbjct: 196 MHQRW 200


>sp|Y570_METJA|UNCHARACTERIZED protein MJ0570|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EMHERWG 7
E HE WG
Sbjct: 204 EWHETWG 210




50|SequenceR|255|246|FRRRREMHER

>sp|RL18_METS3|LARGE ribosomal subunit protein uL18|Methanobrevibacter smithii (strain

Query: 1 FRRRRE 6
FRRRRE
Sbjct: 11 FRRRRE 16


>sp|DAPA_ARCFU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RRREMHER 10
R REMH R
Sbjct: 225 RAREMHHR 232


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 5 REMHER 10
REMHER
Sbjct: 217 REMHER 222


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 1 FRRRREMHE 9
F R +E+HE
Sbjct: 8 FNREKEIHE 16


>sp|Y3621_HALWD|PUTATIVE metal transport protein HQ_3621A|Haloquadratum walsbyi (strain DSM

Query: 1 FRRRREMHE 9
FR RE+HE
Sbjct: 125 FRMFREIHE 133


>sp|RL18_SULAC|LARGE ribosomal subunit protein uL18|Sulfolobus acidocaldarius (strain

Query: 1 FRRRRE 6
FRRRRE
Sbjct: 11 FRRRRE 16


>sp|RL18_METPE|LARGE ribosomal subunit protein uL18|Methanosphaerula palustris (strain

Query: 1 FRRRRE 6
FRRRRE
Sbjct: 11 FRRRRE 16


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 3 RRREMHER 10
+R+E+HER
Sbjct: 236 KRQELHER 243


>sp|RL18_META3|LARGE ribosomal subunit protein uL18|Methanococcus aeolicus (strain

Query: 1 FRRRRE 6
FRRRRE
Sbjct: 11 FRRRRE 16


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 3 RRREMHER 10
+R+E+HER
Sbjct: 236 KRQELHER 243


>sp|RL18_METB6|LARGE ribosomal subunit protein uL18|Methanoregula boonei (strain DSM

Query: 1 FRRRRE 6
FRRRRE
Sbjct: 11 FRRRRE 16


>sp|RL18_METMA|LARGE ribosomal subunit protein uL18|Methanosarcina mazei (strain ATCC

Query: 1 FRRRRE 6
FRRRRE
Sbjct: 11 FRRRRE 16


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 4 RREMHER 10
R+E+HER
Sbjct: 236 RQELHER 242


>sp|RL18_METMP|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 1 FRRRRE 6
FRRRRE
Sbjct: 11 FRRRRE 16


>sp|RL18_METAC|LARGE ribosomal subunit protein uL18|Methanosarcina acetivorans (strain

Query: 1 FRRRRE 6
FRRRRE
Sbjct: 11 FRRRRE 16


>sp|RL18_METBF|LARGE ribosomal subunit protein uL18|Methanosarcina barkeri (strain

Query: 1 FRRRRE 6
FRRRRE
Sbjct: 11 FRRRRE 16


>sp|VHUD_METKA|F420-NON-REDUCING hydrogenase vhu iron-sulfur subunit|Methanopyrus kandleri (strain

Query: 5 REMHER 10
+EMHER
Sbjct: 119 KEMHER 124


>sp|RL18_METM5|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 1 FRRRRE 6
FRRRRE
Sbjct: 11 FRRRRE 16




51|SequenceR|260|251|RFDFEFRRRR

>sp|COBQ_METST|PROBABLE cobyric acid synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 DFEFRRR 9
+FEFRR+
Sbjct: 445 NFEFRRK 451


>sp|RL18_CALMQ|LARGE ribosomal subunit protein uL18|Caldivirga maquilingensis (strain

Query: 1 RFDFEFRRRR 10
R+ +FRRRR
Sbjct: 6 RYKVKFRRRR 15


>sp|RPO1C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 1 RFDFEFRRRR 10
R+D EF RR+
Sbjct: 193 RYDEEFVRRK 202


>sp|RNP4_METB6|RIBONUCLEASE P protein component 4|Methanoregula boonei (strain DSM 21154

Query: 1 RFDFEFRRR 9
R D E+RRR
Sbjct: 53 RIDHEYRRR 61


>sp|RL18_METLZ|LARGE ribosomal subunit protein uL18|Methanocorpusculum labreanum

Query: 1 RFDFEFRRRR 10
R+ +FRRRR
Sbjct: 6 RYFVQFRRRR 15




52|SequenceR|265|256|EDDRDRFDFE

>sp|CRUF_HALJT|BISANHYDROBACTERIORUBERIN hydratase|Haloarcula japonica (strain ATCC 49778

Query: 5 DRFDFE 10
DRFDF+
Sbjct: 276 DRFDFD 281


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DDRDRF 7
D+RDRF
Sbjct: 192 DERDRF 197


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 3 DRDRFDFE 10
DRDR++++
Sbjct: 244 DRDRYNYD 251


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 2 DDRDRF 7
+DRDRF
Sbjct: 655 EDRDRF 660


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 2 DDRDRF 7
+DRDRF
Sbjct: 655 EDRDRF 660


>sp|MOAA_METAR|PROBABLE GTP 3',8-cyclase|Methanocella arvoryzae (strain DSM 22066

Query: 3 DRDRFDF 9
DRDRF F
Sbjct: 118 DRDRFTF 124


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 2 DDRDRF 7
+DRDRF
Sbjct: 656 EDRDRF 661


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 2 DDRDRF 7
+DRDRF
Sbjct: 657 EDRDRF 662


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DDRDRFDFE 10
DD D DF+
Sbjct: 683 DDNDNIDFQ 691


>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 2 DDRDRFD 8
DD +RFD
Sbjct: 274 DDMERFD 280


>sp|DYRB_HALVO|DIHYDROFOLATE reductase HdrB|Haloferax volcanii (Halobacterium volcanii)

Query: 2 DDRDRFDF 9
DDRD F F
Sbjct: 167 DDRDGFSF 174




53|SequenceR|270|261|RRYGREDDRD

>sp|SUI1_METTP|PROTEIN translation factor SUI1 homolog|Methanothrix thermoacetophila

Query: 1 RRYGRE 6
RRYG+E
Sbjct: 35 RRYGKE 40


>sp|SUI1_ARCFU|PROTEIN translation factor SUI1 homolog|Archaeoglobus fulgidus (strain

Query: 1 RRYGRE 6
RRYG+E
Sbjct: 34 RRYGKE 39


>sp|SUI1_METMA|PROTEIN translation factor SUI1 homolog|Methanosarcina mazei (strain ATCC

Query: 1 RRYGRE 6
RRYG+E
Sbjct: 35 RRYGKE 40


>sp|SUI1_METBF|PROTEIN translation factor SUI1 homolog|Methanosarcina barkeri (strain

Query: 1 RRYGRE 6
RRYG+E
Sbjct: 35 RRYGKE 40


>sp|SUI1_METAC|PROTEIN translation factor SUI1 homolog|Methanosarcina acetivorans

Query: 1 RRYGRE 6
RRYG+E
Sbjct: 35 RRYGKE 40


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 RRYGREDDRD 10
R Y REDD +
Sbjct: 5053 RTYTREDDTE 5062


>sp|SUI1_METBU|PROTEIN translation factor SUI1 homolog|Methanococcoides burtonii (strain

Query: 1 RRYGRE 6
RRYG+E
Sbjct: 35 RRYGKE 40


>sp|TRPD_THEKO|ANTHRANILATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 GREDDRD 10
GR +DRD
Sbjct: 272 GRREDRD 278


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RRYGRE 6
RRYG+E
Sbjct: 902 RRYGKE 907


>sp|Y057_METKA|UPF0215 protein MK0057|Methanopyrus kandleri (strain AV19 /

Query: 3 YGREDDR 9
YG EDDR
Sbjct: 20 YGPEDDR 26


>sp|SUI1_SULTO|PROTEIN translation factor SUI1 homolog|Sulfurisphaera tokodaii (strain

Query: 1 RRYGRE 6
RRYG+E
Sbjct: 31 RRYGKE 36


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 3 YGREDD 8
+GREDD
Sbjct: 114 FGREDD 119


>sp|Y196_THEAC|PUTATIVE ankyrin repeat protein Ta0196|Thermoplasma acidophilum (strain

Query: 2 RYGREDDRD 10
RY DDRD
Sbjct: 72 RYDHIDDRD 80


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 2 RYGREDD 8
RYG+ DD
Sbjct: 299 RYGKPDD 305


>sp|SUI1_METB6|PROTEIN translation factor SUI1 homolog|Methanoregula boonei (strain DSM

Query: 1 RRYGRE 6
RRYG+E
Sbjct: 35 RRYGKE 40


>sp|SUI1_HYPBU|PROTEIN translation factor SUI1 homolog|Hyperthermus butylicus (strain

Query: 1 RRYGRE 6
RRYGRE
Sbjct: 34 RRYGRE 39


>sp|Y1399_METJA|UPF0200 protein MJ1399|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RRYGREDD 8
++ GREDD
Sbjct: 122 KKRGREDD 129


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 RRYGREDDR 9
+RYG ED++
Sbjct: 398 KRYGIEDEQ 406




54|SequenceR|275|266|SGSRVRRYGR

>sp|TAL_NITMS|PROBABLE transaldolase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 GSRVRRYG 9
G R+R+YG
Sbjct: 70 GKRLRQYG 77


>sp|PYRK_METTH|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanothermobacter

Query: 3 SRVRRYGR 10
SRVR +GR
Sbjct: 247 SRVREFGR 254


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 SGSRVRRYGR 10
SGS RRY R
Sbjct: 501 SGSIGRRYAR 510




55|SequenceR|280|271|DDISGSGSRV

>sp|PGK_METFV|PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 1 DDISGSGSRV 10
DD SGSRV
Sbjct: 8 DDFDYSGSRV 17


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DDISGSGSR 9
DD+ SGSR
Sbjct: 18 DDVDLSGSR 26


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 1 DDISGSGSRV 10
DDI G+G+ +
Sbjct: 75 DDIKGTGAAI 84




56|SequenceR|285|276|LSDRDDDISG

>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LSDRDDDIS 9
LS+R+DDI+
Sbjct: 651 LSEREDDIN 659


>sp|Y2058_ARCFU|UNCHARACTERIZED protein AF_2058|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DRDDDI 8
DRDDD+
Sbjct: 10 DRDDDL 15


>sp|YPZ3_METTF|UNCHARACTERIZED protein ORF3'|Methanothermobacter thermautotrophicus

Query: 1 LSDRDDDIS 9
LSDR D+++
Sbjct: 155 LSDRSDEVT 163


>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DRDDDISG 10
D DDDI+G
Sbjct: 282 DFDDDITG 289


>sp|YPV3_METTF|UNCHARACTERIZED protein ORF3|Methanothermobacter thermautotrophicus

Query: 1 LSDRDDDIS 9
LSDR D+++
Sbjct: 135 LSDRSDEVT 143




57|SequenceR|290|281|LCWEPLSDRD

>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 CWEPLSDRD 10
C PLSDRD
Sbjct: 179 CTSPLSDRD 187


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 WEPLSD 8
WEPLSD
Sbjct: 233 WEPLSD 238


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 WEPLSD 8
WEPLSD
Sbjct: 210 WEPLSD 215


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 WEPLSD 8
WEPLSD
Sbjct: 212 WEPLSD 217


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 WEPLSD 8
WEP+SD
Sbjct: 208 WEPMSD 213


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 WEPLSD 8
WEP+SD
Sbjct: 207 WEPMSD 212


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 WEPLSD 8
WEP+SD
Sbjct: 207 WEPMSD 212


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 WEPLSD 8
WEP+SD
Sbjct: 208 WEPMSD 213


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 WEPLSD 8
WEP+SD
Sbjct: 206 WEPMSD 211


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 WEPLSD 8
WEP+SD
Sbjct: 205 WEPMSD 210


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 WEPLSDRD 10
WEP+S R+
Sbjct: 335 WEPVSGRE 342


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 2 CWEPLS 7
CW+P+S
Sbjct: 112 CWKPVS 117


>sp|RPO10_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfolobus acidocaldarius (strain

Query: 3 WEPLSDR 9
WEP S+R
Sbjct: 18 WEPFSNR 24


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC

Query: 1 LCWEPLSDR 9
L ++PLSDR
Sbjct: 47 LGYKPLSDR 55


>sp|Y3504_METJA|UNCHARACTERIZED protein MJECL04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WEPLSDRD 10
W+ L DRD
Sbjct: 384 WKDLKDRD 391


>sp|HMD_METTL|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermococcus thermolithotrophicus

Query: 1 LCWEPLSD 8
+C+ PLSD
Sbjct: 321 MCFGPLSD 328


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WEPLSDR 9
WEP DR
Sbjct: 473 WEPDKDR 479


>sp|Y975_PYRAB|UPF0200 protein PYRAB09750|Pyrococcus abyssi (strain GE5 /

Query: 3 WEPLSDRD 10
WE DRD
Sbjct: 135 WEEFLDRD 142


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WEPLSDRD 10
W+ LS+RD
Sbjct: 377 WKILSERD 384


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LCWEPLSD 8
L WE LSD
Sbjct: 435 LAWELLSD 442


>sp|SYH_METJA|HISTIDINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CWEPLSDRD 10
C EPL+D +
Sbjct: 132 CKEPLADAE 140




58|SequenceR|295|286|EEADELCWEP

>sp|Y1120_THEKO|UPF0127 protein TK1120|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EEADELCWEP 10
EE D + W P
Sbjct: 107 EEGDLISWTP 116


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 DELCWE 9
DELCW
Sbjct: 176 DELCWR 181


>sp|RL15_DESA1|LARGE ribosomal subunit protein uL15|Desulfurococcus amylolyticus

Query: 2 EADELCW 8
E DEL W
Sbjct: 78 ELDELAW 84


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 DELCWEP 10
DE+C EP
Sbjct: 563 DEICIEP 569


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EEADELCWEP 10
E ADE+ W P
Sbjct: 424 EIADEVTWYP 433


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEADELCWE 9
+ DEL WE
Sbjct: 483 KRVDELLWE 491


>sp|Y581_THEON|UPF0127 protein TON_0581|Thermococcus onnurineus (strain NA1)

Query: 1 EEADELCWEP 10
EE D + W P
Sbjct: 107 EEGDLIRWSP 116




59|SequenceR|300|291|FTGMEEEADE

>sp|CAS1_METKA|CRISPR-ASSOCIATED endonuclease Cas1|Methanopyrus kandleri (strain AV19 /

Query: 2 TGMEEEADE 10
TG+E+ ADE
Sbjct: 126 TGLEDAADE 134


>sp|COBQ_METPE|PROBABLE cobyric acid synthase|Methanosphaerula palustris (strain ATCC

Query: 1 FTGMEEEADE 10
FTG+EE+ ++
Sbjct: 447 FTGIEEQNED 456


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 FTGMEEEADE 10
FTG +E ADE
Sbjct: 170 FTGNDELADE 179


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FTGMEEEADE 10
FTG +E ADE
Sbjct: 169 FTGNDELADE 178


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 1 FTGMEEEADE 10
FTG +E ADE
Sbjct: 169 FTGNDELADE 178


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 FTGMEEEADE 10
FTG +E ADE
Sbjct: 166 FTGNDEIADE 175


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 1 FTGMEEEADE 10
FTG +E ADE
Sbjct: 166 FTGNDEIADE 175


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FTGMEEEADE 10
FTG +E ADE
Sbjct: 169 FTGDDELADE 178




60|SequenceR|305|296|AGSSDFTGME

>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 1 AGSSDFTGME 10
AG+S F G+E
Sbjct: 288 AGASGFPGVE 297


>sp|HIS6_METS3|IMIDAZOLE glycerol phosphate synthase subunit|Methanobrevibacter smithii

Query: 2 GSSDFTGME 10
G +FTGM+
Sbjct: 167 GGREFTGMD 175


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 AGSSDFTGME 10
+GS D GME
Sbjct: 200 SGSLDHVGME 209


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 AGSSDFTGME 10
+GS D GME
Sbjct: 200 SGSLDHVGME 209


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 AGSSDFTGME 10
+GS D GME
Sbjct: 200 SGSLDHVGME 209


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 AGSSDFTGME 10
+GS D GME
Sbjct: 200 SGSLDHVGME 209


>sp|AROA_SACI7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain

Query: 2 GSSDFTGME 10
G+S+ TG+E
Sbjct: 310 GTSEITGIE 318


>sp|AROA_SACI6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GSSDFTGME 10
G+S+ TG+E
Sbjct: 310 GTSEITGIE 318


>sp|AROA_SACI4|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 2 GSSDFTGME 10
G+S+ TG+E
Sbjct: 310 GTSEITGIE 318


>sp|AROA_SACI3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 GSSDFTGME 10
G+S+ TG+E
Sbjct: 310 GTSEITGIE 318


>sp|AROA_SACI2|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 GSSDFTGME 10
G+S+ TG+E
Sbjct: 310 GTSEITGIE 318


>sp|AROA_SACI1|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain

Query: 2 GSSDFTGME 10
G+S+ TG+E
Sbjct: 310 GTSEITGIE 318


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 AGSSDFTGME 10
+GS D GME
Sbjct: 199 SGSLDHVGME 208


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 AGSSDFTGME 10
+GS D GME
Sbjct: 199 SGSLDHVGME 208


>sp|Y658_METJA|UNCHARACTERIZED protein MJ0658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SSDFTGME 10
++DFTG E
Sbjct: 249 TNDFTGFE 256


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 AGSSDFTGME 10
+GS D GME
Sbjct: 200 SGSLDHVGME 209




61|SequenceR|310|301|KLSLFAGSSD

>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KLSLFAGSSD 10
KLS+F G +D
Sbjct: 841 KLSIFTGGAD 850




62|SequenceR|315|306|EKQVKKLSLF

>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 VKKLSLF 10
VKK+SLF
Sbjct: 219 VKKISLF 225




63|SequenceR|320|311|EEPIPEKQVK

>sp|DGGGP_METM5|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 1 EEPIPEKQV 9
E PIP K++
Sbjct: 72 ERPIPSKRI 80


>sp|DGGGP_METMA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EEPIPEKQVK 10
E PIP +VK
Sbjct: 85 ERPIPSGRVK 94


>sp|DGGGP_METM7|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 1 EEPIPEKQV 9
E PIP K++
Sbjct: 72 ERPIPSKRL 80


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEPIPEKQVK 10
+EP P Q+K
Sbjct: 825 DEPFPPVQIK 834


>sp|DDH_HALMT|D-2-HYDROXYACID dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 1 EEPIPE 6
EEP+PE
Sbjct: 254 EEPLPE 259


>sp|GGGPS_PYRHO|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EPIPEKQVK 10
EP+PE+ V+
Sbjct: 185 EPVPEEMVR 193


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 EEPIPE 6
EEP+PE
Sbjct: 559 EEPMPE 564


>sp|AOR_THEKO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Thermococcus kodakarensis

Query: 1 EEPIPE 6
EEP+PE
Sbjct: 557 EEPMPE 562


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 1 EEPIPE 6
EEP+PE
Sbjct: 559 EEPMPE 564


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 1 EEPIPE 6
EEP+PE
Sbjct: 557 EEPMPE 562


>sp|MCRZ_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 2 EPIPEKQVK 10
EP+PE ++K
Sbjct: 206 EPLPEDELK 214




64|SequenceR|325|316|FDMEQEEPIP

>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FDMEQEEPIP 10
FD+ +EE IP
Sbjct: 198 FDLLEEEKIP 207


>sp|6PGD_HALVD|6-PHOSPHOGLUCONATE dehydrogenase, NAD(+)-dependent, decarboxylating|Haloferax volcanii

Query: 3 MEQEEPIP 10
+EQE P+P
Sbjct: 252 LEQEVPVP 259


>sp|ARGDC_CALMQ|ARGININE decarboxylase proenzyme|Caldivirga maquilingensis (strain ATCC

Query: 4 EQEEPIP 10
+QE PIP
Sbjct: 4 QQESPIP 10


>sp|TRM56_METS3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanobrevibacter smithii

Query: 1 FDMEQEEPI 9
FD+E E P+
Sbjct: 153 FDLEFENPV 161


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 FDMEQEEPIP 10
D E+E P+P
Sbjct: 134 LDFEKELPVP 143


>sp|RRP42_SULTO|EXOSOME complex component Rrp42|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 MEQEEPIP 10
+E+EEP P
Sbjct: 69 LEEEEPFP 76


>sp|PYRI_META3|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus aeolicus

Query: 1 FDMEQEEPI 9
FD+E EP+
Sbjct: 129 FDVEGREPL 137




65|SequenceR|330|321|EDVPRFDMEQ

>sp|Y516_METJA|UNCHARACTERIZED protein MJ0516|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PRFDMEQ 10
PR+D+EQ
Sbjct: 34 PRYDIEQ 40


>sp|HYPA_THEGJ|HYDROGENASE maturation factor HypA|Thermococcus gammatolerans (strain DSM

Query: 1 EDVPRFDMEQ 10
ED+ +F MEQ
Sbjct: 41 EDIVKFAMEQ 50


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 3 VPRFDMEQ 10
VPR+D+E+
Sbjct: 358 VPRWDLEK 365


>sp|ENDA_SULAC|TRNA-SPLICING endonuclease|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EDVPRFDM 8
E++PRF++
Sbjct: 83 ENIPRFEL 90


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EDVPRF 6
ED+PRF
Sbjct: 109 EDIPRF 114


>sp|HYPA_THEKO|HYDROGENASE maturation factor HypA|Thermococcus kodakarensis (strain ATCC

Query: 1 EDVPRFDMEQ 10
ED+ +F MEQ
Sbjct: 41 EDIVKFAMEQ 50


>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EDVPRFDMEQ 10
ED+ + DME+
Sbjct: 352 EDMKQIDMEE 361


>sp|Y603_ARCFU|UNCHARACTERIZED protein AF_0603|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EDVPRFDME 9
EDV RF++E
Sbjct: 17 EDVFRFEIE 25




66|SequenceR|335|326|SCEEGEDVPR

>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 1 SCEEGEDVPR 10
S EGED+PR
Sbjct: 131 SVAEGEDIPR 140


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SCEEGEDVPR 10
S EG+D+PR
Sbjct: 129 SVAEGDDIPR 138


>sp|UREG_NATPD|UREASE accessory protein UreG|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SCEEGEDVPR 10
S EG+D+PR
Sbjct: 129 SVAEGDDIPR 138


>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EEGEDVP 9
EEGED P
Sbjct: 231 EEGEDYP 237


>sp|RL24_METLZ|LARGE ribosomal subunit protein uL24|Methanocorpusculum labreanum

Query: 5 GEDVPR 10
GEDVPR
Sbjct: 89 GEDVPR 94


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 EGEDVP 9
EGEDVP
Sbjct: 200 EGEDVP 205


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 EGEDVP 9
EGEDVP
Sbjct: 200 EGEDVP 205


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain

Query: 2 CEEGEDVP 9
CE+G++VP
Sbjct: 49 CEKGKEVP 56


>sp|RL10_METST|LARGE ribosomal subunit protein uL10|Methanosphaera stadtmanae (strain

Query: 3 EEGEDVPR 10
+EGE++P+
Sbjct: 159 DEGEEIPK 166


>sp|QUEC_METBF|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SCEEGEDVP 9
SC GE++P
Sbjct: 194 SCYRGEEIP 202


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter

Query: 2 CEEGEDVP 9
CE+G +VP
Sbjct: 49 CEKGREVP 56


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain

Query: 2 CEEGEDVP 9
CE+G +VP
Sbjct: 49 CEKGREVP 56


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 2 CEEGEDVP 9
C++ EDVP
Sbjct: 165 CDDTEDVP 172


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 EEGEDVPR 10
+ GED+PR
Sbjct: 304 KHGEDLPR 311


>sp|HEM1_METMJ|GLUTAMYL-TRNA reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 EGEDVPR 10
EGE VPR
Sbjct: 82 EGEAVPR 88


>sp|VOLA_HALVD|VOLACTIN volcanii (strain ATCC 29605

Query: 2 CEEGEDVP 9
EEG DVP
Sbjct: 263 IEEGLDVP 270




67|SequenceR|340|331|SGESDSCEEG

>sp|RNZ_PYRHO|RIBONUCLEASE Z|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SGESDSCEE 9
SG+++ C+E
Sbjct: 206 SGDTEPCDE 214


>sp|Y3406_NATPD|UPF0179 protein NP_3406A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GESDSCE 8
GE+D+CE
Sbjct: 22 GETDACE 28




68|SequenceR|345|336|AEENHSGESD

>sp|F16PA_HALWD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EENHSGES 9
EEN SGES
Sbjct: 56 EENPSGES 63


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AEENHSGESD 10
AE H GE+D
Sbjct: 591 AEFKHLGEAD 600


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 2 EENHSG 7
+ENHSG
Sbjct: 520 DENHSG 525




69|SequenceR|350|341|KDPEKAEENH

>sp|PUR5_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DPEKAEE 8
DPE+AEE
Sbjct: 107 DPERAEE 113


>sp|GGGPS_HYPBU|GERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 KDPEKA 6
KDPEKA
Sbjct: 231 KDPEKA 236


>sp|Y970_ARCFU|UNCHARACTERIZED protein AF_0970|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PEKAEE 8
PEKAEE
Sbjct: 76 PEKAEE 81


>sp|TRPF_METTP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KDPEKAEE 8
KDP KAEE
Sbjct: 192 KDPVKAEE 199


>sp|THIM_PYRFU|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DPEKAEE 8
DPE+A+E
Sbjct: 143 DPERAKE 149


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KDPEKAEENH 10
+DPE+ E H
Sbjct: 134 RDPEEQAETH 143


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 2 DPEKAEE 8
DPEKA+E
Sbjct: 476 DPEKAKE 482


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KDPEKAEEN 9
+DPE +EN
Sbjct: 200 RDPEPIDEN 208


>sp|RL4_METS3|LARGE ribosomal subunit protein uL4|Methanobrevibacter smithii (strain

Query: 3 PEKAEENH 10
P +AE+NH
Sbjct: 93 PTRAEKNH 100


>sp|TPIS_PYRHO|TRIOSEPHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KDPEKA 6
KDPEKA
Sbjct: 211 KDPEKA 216


>sp|TPIS_PYRWO|TRIOSEPHOSPHATE isomerase|Pyrococcus woesei

Query: 1 KDPEKA 6
KDPEKA
Sbjct: 212 KDPEKA 217


>sp|TPIS_PYRFU|TRIOSEPHOSPHATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KDPEKA 6
KDPEKA
Sbjct: 212 KDPEKA 217


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 2 DPEKAE 7
DPEKAE
Sbjct: 244 DPEKAE 249


>sp|TPIS_PYRAB|TRIOSEPHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 KDPEKA 6
KDPEKA
Sbjct: 211 KDPEKA 216


>sp|RS4E_METJA|SMALL ribosomal subunit protein eS4|Methanocaldococcus jannaschii (strain

Query: 2 DPEKAEEN 9
DP KAEE+
Sbjct: 152 DPTKAEED 159


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 3 PEKAEE 8
PEKAEE
Sbjct: 79 PEKAEE 84




70|SequenceR|355|346|EKKNTKDPEK

>sp|MTXX_METAC|PUTATIVE methyltransferase mtx subunit X|Methanosarcina acetivorans

Query: 1 EKKNTKDPEK 10
E +TKDPEK
Sbjct: 62 EVVDTKDPEK 71


>sp|HTPX_PICTO|PROTEASE HtpX homolog|Picrophilus torridus (strain ATCC 700027

Query: 1 EKKNTKDPE 9
EK N K+PE
Sbjct: 92 EKNNIKEPE 100


>sp|MTXX_METMA|PUTATIVE methyltransferase mtx subunit X|Methanosarcina mazei (strain ATCC

Query: 4 NTKDPEK 10
+T+DPEK
Sbjct: 65 DTEDPEK 71


>sp|MTRD_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanocaldococcus jannaschii (strain

Query: 5 TKDPEK 10
TKDP+K
Sbjct: 120 TKDPQK 125


>sp|HEM1_METTM|GLUTAMYL-TRNA reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 KNTKDPEK 10
+N+KDPE+
Sbjct: 346 ENSKDPER 353


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 TKDPEK 10
TKDPEK
Sbjct: 459 TKDPEK 464


>sp|HIS1_METMP|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 KKNTKDPEK 10
KK+ +DPEK
Sbjct: 188 KKSMEDPEK 196


>sp|HIS1_METM7|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 KKNTKDPEK 10
KK+ +DPEK
Sbjct: 188 KKSMEDPEK 196




71|SequenceR|360|351|DTKEGEKKNT

>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 TKEGEKKN 9
TK+GEK+N
Sbjct: 238 TKDGEKRN 245


>sp|ARGJ_METVS|GLUTAMATE N-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DTKEGEKKNT 10
D K+GE KNT
Sbjct: 380 DLKKGEFKNT 389




72|SequenceR|365|356|EVGVRDTKEG

>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EVGVRDTKEG 10
E+G RD +EG
Sbjct: 338 EIGPRDIEEG 347


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 EVGVRDTKEG 10
E+G RD K+G
Sbjct: 350 EIGPRDLKDG 359


>sp|RNH2_SULAC|RIBONUCLEASE HII|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EVGVRDTKE 9
E+GV+D+K+
Sbjct: 35 EIGVKDSKK 43


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EVGVRDTKEG 10
E+G RD K G
Sbjct: 351 EIGPRDIKNG 360


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 EVGVRDTKE 9
EVG+RD K+
Sbjct: 31 EVGIRDEKK 39


>sp|Y241_METJA|UNCHARACTERIZED protein MJ0241|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GVRDTKEG 10
GVR TKEG
Sbjct: 56 GVRLTKEG 63


>sp|RNH2_THEVO|RIBONUCLEASE HII|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EVGVRDTK 8
E+GV+D+K
Sbjct: 35 EIGVKDSK 42


>sp|LIPA_PYRAR|LIPOYL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EVGVRDTKEG 10
EVG R TK G
Sbjct: 190 EVGCRLTKSG 199


>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EVGVRDTKEG 10
++ V+D KEG
Sbjct: 290 DISVKDLKEG 299


>sp|RNH2_PYRAR|RIBONUCLEASE HII|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EVGVRDTKE 9
++GVRD+K
Sbjct: 34 KIGVRDSKS 42


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 VRDTKEG 10
V+DTKEG
Sbjct: 458 VQDTKEG 464


>sp|RNH2_PYRAE|RIBONUCLEASE HII|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EVGVRDTK 8
++GVRD+K
Sbjct: 31 KIGVRDSK 38


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 VRDTKEG 10
V+DTKEG
Sbjct: 458 VQDTKEG 464


>sp|RNH2_AERPE|RIBONUCLEASE HII|Aeropyrum pernix (strain ATCC 700893

Query: 2 VGVRDTKE 9
+GVRD+K+
Sbjct: 37 LGVRDSKQ 44


>sp|RNH2_PYRIL|RIBONUCLEASE HII|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EVGVRDTK 8
++GVRD+K
Sbjct: 31 QLGVRDSK 38


>sp|RNH2_HYPBU|RIBONUCLEASE HII|Hyperthermus butylicus (strain DSM 5456

Query: 2 VGVRDTKE 9
+GVRD+K+
Sbjct: 42 LGVRDSKQ 49




73|SequenceR|370|361|TEESAEVGVR

>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 TEESAEVGVR 10
TE AEVG+R
Sbjct: 173 TEYHAEVGLR 182


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 1 TEESAEVGVR 10
TE AEVG+R
Sbjct: 173 TEYHAEVGLR 182


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 1 TEESAEVGVR 10
TE AEVG+R
Sbjct: 173 TEYHAEVGLR 182




74|SequenceR|375|366|SSTQPTEESA

***** No hits found ******


75|SequenceR|380|371|PRASSSSTQP

***** No hits found ******


76|SequenceR|385|376|DSPTGPRASS

>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 DSPTGPR 7
D+P+GPR
Sbjct: 498 DTPSGPR 504


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 1 DSPTGPRAS 9
D PTGP S
Sbjct: 123 DIPTGPDVS 131


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 1 DSPTGPRAS 9
D PTGP S
Sbjct: 123 DIPTGPDVS 131


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 1 DSPTGPRAS 9
D PTGP S
Sbjct: 123 DIPTGPDVS 131


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DSPTGPRAS 9
D PTGP S
Sbjct: 123 DIPTGPDVS 131


>sp|BRIX_PYRAE|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrobaculum aerophilum

Query: 2 SPTGPRASS 10
S GPRASS
Sbjct: 162 SDLGPRASS 170


>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DSPTGPRAS 9
DSPT PR +
Sbjct: 13 DSPTSPRKT 21


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DSPTGPRAS 9
D P PRAS
Sbjct: 348 DQPPNPRAS 356


>sp|ACDD_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit delta|Archaeoglobus fulgidus

Query: 1 DSPTGPR 7
D+P GPR
Sbjct: 386 DTPWGPR 392


>sp|NREA_HALVD|DNA repair protein NreA|Haloferax volcanii (strain ATCC 29605

Query: 2 SPTGPRASS 10
+P GPRA +
Sbjct: 162 TPVGPRARA 170




77|SequenceR|390|381|EQSQHDSPTG

>sp|Y1418_SULTO|UPF0173 metal-dependent hydrolase STK_14180|Sulfurisphaera tokodaii (strain

Query: 3 SQHDSPTG 10
S+H PTG
Sbjct: 118 SEHSDPTG 125


>sp|Y2125_METS5|UPF0173 metal-dependent hydrolase Msed_2125|Metallosphaera sedula (strain

Query: 3 SQHDSPTG 10
S+H PTG
Sbjct: 117 SEHSDPTG 124


>sp|GVPK1_HALSA|GAS vesicle protein K1|Halobacterium salinarum (strain ATCC 700922

Query: 3 SQHDSPTG 10
S+H++P+G
Sbjct: 95 SEHETPSG 102




78|SequenceR|395|386|EFQSAEQSQH

***** No hits found ******


79|SequenceR|400|391|PEDKREFQSA

>sp|SECY_AERPE|PROTEIN translocase subunit SecY|Aeropyrum pernix (strain ATCC 700893

Query: 1 PEDKREFQSA 10
PE +R+F SA
Sbjct: 105 PEGRRKFTSA 114


>sp|MDH_THETK|MALATE dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 PEDKREFQSA 10
PE+K+ FQ +
Sbjct: 283 PEEKQRFQQS 292


>sp|TRM56_METBF|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina barkeri

Query: 4 KREFQSA 10
KREFQ+A
Sbjct: 152 KREFQNA 158


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PEDKREFQSA 10
PE++RE +A
Sbjct: 261 PEEERELHTA 270


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 2 EDKREFQSA 10
+DKREF+ A
Sbjct: 287 DDKREFEFA 295


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 DKREFQSA 10
+KREF+SA
Sbjct: 879 EKREFKSA 886


>sp|DNAG_SULAC|DNA primase DnaG|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PEDKREFQ 8
PE+K+E Q
Sbjct: 305 PEEKKEIQ 312




80|SequenceR|405|396|TQETKPEDKR

>sp|GUAAB_HALMA|GMP synthase [glutamine-hydrolyzing] subunit B|Haloarcula marismortui

Query: 3 ETKPEDKR 10
ET PE+KR
Sbjct: 93 ETDPEEKR 100


>sp|MFNF_METVA|(4- vannielii

Query: 1 TQETKPEDKR 10
T + KP DKR
Sbjct: 100 TPDGKPADKR 109




81|SequenceR|410|401|EEAKETQETK

>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEAKETQETK 10
EE +TQETK
Sbjct: 328 EEKSQTQETK 337


>sp|HIS7_METB6|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanoregula boonei (strain DSM 21154

Query: 3 AKETQETK 10
A+ET+ETK
Sbjct: 6 ARETKETK 13




82|SequenceR|415|406|EMRTEEEAKE

>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 1 EMRTEEEAKE 10
E TEE+AKE
Sbjct: 424 EAHTEEKAKE 433




83|SequenceR|420|411|APLSNEMRTE

>sp|RL24_NATPD|LARGE ribosomal subunit protein uL24|Natronomonas pharaonis (strain

Query: 1 APLSNEMRTE 10
APLS E+R E
Sbjct: 26 APLSPELREE 35


>sp|RL24_IGNH4|LARGE ribosomal subunit protein uL24|Ignicoccus hospitalis (strain

Query: 1 APLSNEMR 8
APLS E+R
Sbjct: 30 APLSKELR 37


>sp|Y076_METFV|UNCHARACTERIZED protein Mfer_0076|Methanothermus fervidus (strain ATCC 43054

Query: 2 PLSNEMRTE 10
P+SNE+R +
Sbjct: 134 PMSNEIRIK 142


>sp|RL24_PYRHO|LARGE ribosomal subunit protein uL24|Pyrococcus horikoshii (strain ATCC

Query: 1 APLSNEMR 8
APLS E+R
Sbjct: 29 APLSKELR 36


>sp|RL24_THEKO|LARGE ribosomal subunit protein uL24|Thermococcus kodakarensis (strain

Query: 1 APLSNEMR 8
APLS E+R
Sbjct: 29 APLSKELR 36


>sp|RL24_STAMF|LARGE ribosomal subunit protein uL24|Staphylothermus marinus (strain

Query: 1 APLSNEMR 8
APLS E+R
Sbjct: 30 APLSKELR 37




84|SequenceR|425|416|RSPVKAPLSN

>sp|DADD_METST|5'-DEOXYADENOSINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PVKAPLSN 10
PV+ PLSN
Sbjct: 373 PVRNPLSN 380


>sp|PELO_STAMF|PROTEIN pelota homolog|Staphylothermus marinus (strain ATCC 43588

Query: 1 RSPVKAPLSN 10
R P+K PL+N
Sbjct: 347 RYPLKKPLNN 356


>sp|PDXT_IGNH4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Ignicoccus hospitalis (strain

Query: 1 RSPVKAPLS 9
R+PV PLS
Sbjct: 144 RAPVMVPLS 152


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PVKAPLS 9
PVK PLS
Sbjct: 500 PVKLPLS 506


>sp|FDHC_METFO|PROBABLE formate transporter|Methanobacterium formicicum

Query: 5 KAPLSN 10
KAPLSN
Sbjct: 24 KAPLSN 29




85|SequenceR|430|421|VMEDGRSPVK

>sp|Y625_METJA|UNCHARACTERIZED ATP-binding protein MJ0625|Methanocaldococcus jannaschii (strain

Query: 1 VMEDGRSPV 9
V+EDG+ PV
Sbjct: 122 VVEDGKKPV 130


>sp|TRUA_METLZ|TRNA pseudouridine synthase A|Methanocorpusculum labreanum (strain ATCC

Query: 2 MEDGRSPVK 10
ME GR PV+
Sbjct: 142 MEAGRDPVR 150


>sp|RL4_AERPE|LARGE ribosomal subunit protein uL4|Aeropyrum pernix (strain ATCC 700893

Query: 1 VMEDGRSPV 9
V+ED RSP+
Sbjct: 212 VLEDPRSPL 220


>sp|Y3526_METJA|UNCHARACTERIZED ATP-binding protein MJECL26|Methanocaldococcus jannaschii (strain

Query: 1 VMEDGRSPV 9
V+E+G+ PV
Sbjct: 126 VVEEGKKPV 134


>sp|TRUA_METKA|TRNA pseudouridine synthase A|Methanopyrus kandleri (strain AV19 /

Query: 3 EDGRSPV 9
EDGR+P+
Sbjct: 136 EDGRNPI 142


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 3 EDGRSPVK 10
EDG SPV+
Sbjct: 909 EDGTSPVQ 916


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 3 EDGRSPVK 10
EDG SPV+
Sbjct: 909 EDGTSPVQ 916


>sp|ASPD_METTH|L-ASPARTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 DGRSPVK 10
DGR PVK
Sbjct: 24 DGRVPVK 30


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 2 MEDGRSPVK 10
+E GR PV+
Sbjct: 144 LEPGRDPVR 152


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 VMEDGRSPV 9
V+E GR+P
Sbjct: 350 VLESGRAPT 358


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 1 VMEDGRSPVK 10
++ +GR+P+K
Sbjct: 5 IITEGRTPLK 14


>sp|BRIX_PYRAB|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus abyssi

Query: 1 VMEDGR 6
+MEDGR
Sbjct: 189 IMEDGR 194


>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 1 VMEDGR 6
+MEDGR
Sbjct: 189 IMEDGR 194


>sp|BRIX_PYRHO|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus horikoshii

Query: 1 VMEDGR 6
+MEDGR
Sbjct: 189 IMEDGR 194


>sp|BRIX_THEKO|PROBABLE Brix domain-containing ribosomal biogenesis|Thermococcus

Query: 1 VMEDGR 6
+MEDGR
Sbjct: 189 IMEDGR 194


>sp|RIFK_METAR|RIBOFLAVIN kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VMEDGRSPV 9
+ EDG +PV
Sbjct: 85 IFEDGGAPV 93




86|SequenceR|435|426|QQVDAVMEDG

>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 VDAVMEDG 10
+DAVM DG
Sbjct: 215 IDAVMPDG 222


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VDAVMEDG 10
+DAVM DG
Sbjct: 218 LDAVMPDG 225


>sp|ARGB_METLZ|ACETYLGLUTAMATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 QQVDAVMEDG 10
+ VDA+M DG
Sbjct: 230 KNVDALMSDG 239


>sp|HUTI_HALMA|IMIDAZOLONEPROPIONASE marismortui (strain ATCC 43049

Query: 3 VDAVMEDG 10
VDA+++DG
Sbjct: 396 VDAILKDG 403


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VDAVMEDG 10
+DA+M DG
Sbjct: 218 IDAMMPDG 225


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VDAVMEDG 10
+DA+M DG
Sbjct: 218 LDAIMPDG 225


>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QQVDAVMEDG 10
+QVDA+ ++G
Sbjct: 33 EQVDAINKNG 42


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 2 QVDAVMEDG 10
++D+V+E+G
Sbjct: 143 EIDSVLEEG 151




87|SequenceR|440|431|IQSLPQQVDA

>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 SLPQQVDA 10
SLP+QVD+
Sbjct: 36 SLPKQVDS 43


>sp|KHK_HALVD|KETOHEXOKINASE volcanii (strain ATCC 29605

Query: 2 QSLPQQVDA 10
+SLP++VD
Sbjct: 17 ESLPERVDG 25


>sp|NNR_ARCFU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Archaeoglobus fulgidus (strain

Query: 2 QSLPQQVDA 10
+ LP+++DA
Sbjct: 101 EGLPEEIDA 109




88|SequenceR|445|436|ATDSPIQSLP

>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 4 SPIQSLP 10
SPIQ+LP
Sbjct: 248 SPIQTLP 254


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 4 SPIQSLP 10
+P+QSLP
Sbjct: 70 TPLQSLP 76


>sp|RPO3_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum neutrophilum (strain DSM

Query: 4 SPIQSLP 10
+P+QSLP
Sbjct: 70 TPLQSLP 76


>sp|THI4_AERPE|THIAMINE thiazole synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 SPIQSLP 10
SP+Q LP
Sbjct: 148 SPVQGLP 154




89|SequenceR|450|441|ILLPSATDSP

>sp|DP2S_HALSA|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 4 PSATDSP 10
PSATD+P
Sbjct: 89 PSATDTP 95


>sp|DP2S_HALS3|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 4 PSATDSP 10
PSATD+P
Sbjct: 89 PSATDTP 95




90|SequenceR|455|446|VPPPLILLPS

>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 PPPLILLP 9
PPP IL P
Sbjct: 607 PPPHILFP 614


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 2 PPPLILLPS 10
PPP +L P+
Sbjct: 585 PPPHVLFPT 593


>sp|DPHB_METS5|DIPHTHINE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PPPLILLPS 10
PP +I++PS
Sbjct: 231 PPHIIIVPS 239


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VPPPLILLPS 10
V PP+ +LPS
Sbjct: 345 VQPPVNVLPS 354


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 700922

Query: 1 VPPPLILLPS 10
V PP+ +LPS
Sbjct: 344 VTPPVNVLPS 353


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 1 VPPPLILLPS 10
V PP+ +LPS
Sbjct: 344 VTPPVNVLPS 353


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VPPPLILLPS 10
+ PP+ +LPS
Sbjct: 344 IEPPINVLPS 353


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 1 VPPPLILLPS 10
+ PP+ +LPS
Sbjct: 343 IQPPINVLPS 352


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 PPPLILLP 9
PPP +L P
Sbjct: 706 PPPHVLFP 713


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 1 VPPPLILLPS 10
V PP+ +LPS
Sbjct: 343 VYPPVDILPS 352


>sp|DGGGP_ARCFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPPLILLP 9
P PL LLP
Sbjct: 228 PIPLFLLP 235


>sp|AATB_THEPD|A-TYPE ATP synthase subunit B|Thermofilum pendens (strain DSM 2475

Query: 3 PPLILLPS 10
PP+ +LPS
Sbjct: 341 PPINILPS 348




91|SequenceR|460|451|PSPNPVPPPL

>sp|Y1464_METJA|UNCHARACTERIZED GTP-binding protein MJ1464|Methanocaldococcus jannaschii (strain

Query: 4 NPVPPPL 10
NP+PP L
Sbjct: 187 NPIPPAL 193


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 PSPNPVPPPL 10
PSP+P+PP +
Sbjct: 295 PSPDPLPPEI 304


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii (strain

Query: 3 PNPVPPPL 10
P PVP PL
Sbjct: 544 PFPVPTPL 551


>sp|HJE_SULAC|CROSSOVER junction endodeoxyribonuclease Hje|Sulfolobus acidocaldarius

Query: 2 SPNPVP 7
SPNP+P
Sbjct: 33 SPNPLP 38


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SPNPVPPP 9
+PNP PP
Sbjct: 99 APNPNGPP 106


>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PVPPP 9
PVPPP
Sbjct: 163 PVPPP 167


>sp|PSTB_HALWD|PHOSPHATE import ATP-binding protein PstB|Haloquadratum walsbyi (strain DSM

Query: 2 SPNPVP 7
SPNP P
Sbjct: 136 SPNPFP 141


>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain

Query: 1 PSPNPVPP 8
P P VPP
Sbjct: 13 PGPTMVPP 20


>sp|PCNA_METS3|DNA polymerase sliding clamp|Methanobrevibacter smithii (strain ATCC

Query: 4 NPVPPPL 10
NP PP L
Sbjct: 120 NPTPPEL 126


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 3 PNPVPPP 9
PNP+P P
Sbjct: 89 PNPLPRP 95


>sp|GGGPS_PYRAB|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 SPNPVPPPL 10
SP PVPP +
Sbjct: 182 SPEPVPPEM 190


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 SPNPVPPP 9
SPN PPP
Sbjct: 84 SPNLAPPP 91


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SPNPVPPP 9
SP P+P P
Sbjct: 518 SPGPLPAP 525


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PSPNPVP 7
P+P PVP
Sbjct: 285 PAPVPVP 291


>sp|PSTB2_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain ATCC

Query: 2 SPNPVP 7
SPNP P
Sbjct: 142 SPNPFP 147


>sp|RNH2_SACS2|RIBONUCLEASE HII|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 NPVPPPL 10
NP PPP+
Sbjct: 181 NPNPPPI 187


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSPNPVPP 8
P+P VPP
Sbjct: 517 PNPGDVPP 524


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PSPNPVPPP 9
P NP P P
Sbjct: 150 PVKNPTPAP 158


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 1 PSPNPVPPP 9
P P+ + PP
Sbjct: 433 PDPSDIDPP 441


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PNPVPP 8
P P+PP
Sbjct: 401 PKPIPP 406


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PSPNPVP 7
P+P PVP
Sbjct: 258 PAPYPVP 264


>sp|GGGPS_THEKO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SPNPVPPPL 10
+P PVPP +
Sbjct: 181 APQPVPPEM 189


>sp|GGGPS_THEGJ|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SPNPVPPPL 10
+P PVPP +
Sbjct: 181 APQPVPPEM 189


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PSPNPVP 7
P+P PVP
Sbjct: 276 PAPYPVP 282


>sp|RL1_PICTO|LARGE ribosomal subunit protein uL1|Picrophilus torridus (strain ATCC

Query: 3 PNPVPP 8
P PVPP
Sbjct: 125 PRPVPP 130


>sp|SUCD_METS5|SUCCINATE-SEMIALDEHYDE dehydrogenase (acetylating)|Metallosphaera sedula (strain ATCC

Query: 5 PVPPPL 10
PVPPP+
Sbjct: 50 PVPPPV 55


>sp|GGGPS_STAMF|GERANYLGERANYLGLYCERYL phosphate synthase|Staphylothermus marinus (strain ATCC 43588

Query: 2 SPNPVPP 8
SP PVPP
Sbjct: 179 SPKPVPP 185


>sp|GGGPS_PYRCJ|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 SPNPVPPPL 10
+P PVPP +
Sbjct: 174 APQPVPPEM 182


>sp|GGGPS_PYRAR|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SPNPVPPPL 10
+P PVPP +
Sbjct: 173 APQPVPPDM 181


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PSPNPVPPP 9
PSPNP P
Sbjct: 5 PSPNPPVEP 13


>sp|HJE_SACI5|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus islandicus

Query: 2 SPNPVP 7
SPNP+P
Sbjct: 33 SPNPLP 38


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PNPVPPPL 10
P+P+ PPL
Sbjct: 35 PSPIDPPL 42


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PSPNPVPPPL 10
P PN PP+
Sbjct: 515 PDPNEEKPPI 524


>sp|PSTB_PYRAE|PHOSPHATE import ATP-binding protein PstB|Pyrobaculum aerophilum (strain

Query: 3 PNPVP 7
PNP+P
Sbjct: 91 PNPIP 95


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 SPNPVPPP 9
+PNP PP
Sbjct: 109 APNPNGPP 116


>sp|RL1_THEAC|LARGE ribosomal subunit protein uL1|Thermoplasma acidophilum (strain ATCC

Query: 3 PNPVPP 8
P P+PP
Sbjct: 130 PRPIPP 135


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 PSPNPVPPP 9
P P P PP
Sbjct: 529 PLPEPEKPP 537




92|SequenceR|465|456|VPRLTPSPNP

>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 PRLTPSPNP 10
PRL P+ NP
Sbjct: 372 PRLNPNHNP 380


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 1 VPRLTPSPNP 10
+PR+ +PNP
Sbjct: 503 LPRIEKNPNP 512


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RLTPSPNP 10
R+ PSP+P
Sbjct: 163 RVVPSPDP 170


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RLTPSPNP 10
R+ PSP+P
Sbjct: 154 RVVPSPDP 161


>sp|CPKA_PYRAB|CARBAMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 RLTPSPNP 10
R+ PSP+P
Sbjct: 163 RVVPSPDP 170


>sp|CPKA_PYRHO|CARBAMATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RLTPSPNP 10
R+ PSP+P
Sbjct: 163 RVVPSPDP 170


>sp|LYSZ_PYRAE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum aerophilum

Query: 1 VPRLTP 6
VPRLTP
Sbjct: 197 VPRLTP 202


>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RLTPSPNP 10
R+ PSP+P
Sbjct: 163 RVVPSPDP 170


>sp|LYSZ_PYRCJ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 1 VPRLTP 6
VPRLTP
Sbjct: 197 VPRLTP 202


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 5 TPSPNP 10
TP PNP
Sbjct: 398 TPEPNP 403


>sp|ARCC_THEVO|CARBAMATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 RLTPSPNP 10
R+ PSP P
Sbjct: 154 RVVPSPEP 161


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VPRLTPSPNP 10
+P++ PNP
Sbjct: 503 LPKIEKDPNP 512


>sp|ARCC_HALSA|CARBAMATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 RLTPSPNP 10
R+ PSP P
Sbjct: 153 RVVPSPKP 160


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PRLTPSPNP 10
P +TP NP
Sbjct: 278 PAITPEENP 286


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PRLTPSPNP 10
P LTP NP
Sbjct: 369 PHLTPWRNP 377


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VPRLTPSPN 9
V RL PSP+
Sbjct: 97 VMRLAPSPS 105




93|SequenceR|470|461|VVPTEVPRLT

>sp|RRP4_METS3|EXOSOME complex component Rrp4|Methanobrevibacter smithii (strain ATCC

Query: 1 VVPTEVPRL 9
+ PT+VPRL
Sbjct: 146 ITPTKVPRL 154


>sp|RRP4_METBU|EXOSOME complex component Rrp4|Methanococcoides burtonii (strain DSM 6242

Query: 1 VVPTEVPRL 9
VVP++VPR+
Sbjct: 142 VVPSKVPRV 150


>sp|RRP4_METTH|EXOSOME complex component Rrp4|Methanothermobacter thermautotrophicus

Query: 1 VVPTEVPRL 9
+ PT+VPRL
Sbjct: 146 ITPTKVPRL 154


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VPTEVPRLT 10
+P EV RLT
Sbjct: 161 IPQEVARLT 169


>sp|HTPX_THESM|PROTEASE HtpX homolog|Thermococcus sibiricus (strain DSM 12597

Query: 1 VVPTEVP 7
+VPTE P
Sbjct: 92 IVPTETP 98


>sp|HEM3_HALSA|PROBABLE porphobilinogen deaminase|Halobacterium salinarum (strain ATCC

Query: 2 VPTEVP 7
VPTEVP
Sbjct: 83 VPTEVP 88


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain

Query: 2 VPTEVPRL 9
+PTE+P L
Sbjct: 49 IPTEIPGL 56


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 VPTEVPRL 9
+PTE+P L
Sbjct: 49 IPTEIPGL 56


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 1 VVPTEVPR 8
++P EVPR
Sbjct: 383 LIPVEVPR 390


>sp|IPYR_METKA|INORGANIC pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 2 VPTEVPRL 9
VPTE PR
Sbjct: 110 VPTEDPRF 117


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VVPTEVP 7
++PTE P
Sbjct: 92 IIPTETP 98




94|SequenceR|475|466|MGPAGVVPTE

>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain

Query: 1 MGPAGVVPTE 10
M PAG +P+E
Sbjct: 1 MSPAGKLPSE 10


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 2 GPAGVVPTE 10
GP G +PTE
Sbjct: 177 GPPGFIPTE 185


>sp|NAH1_METJA|NA(+)/H(+) antiporter 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPAGVVP 8
GP GVVP
Sbjct: 345 GPRGVVP 351


>sp|HUTI_THEAC|IMIDAZOLONEPROPIONASE acidophilum (strain ATCC 25905

Query: 2 GPAGVVPT 9
GP VVPT
Sbjct: 164 GPISVVPT 171


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain

Query: 3 PAGVVPTE 10
PAGV P E
Sbjct: 66 PAGVSPRE 73


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 3 PAGVVPTE 10
P GVVP E
Sbjct: 327 PFGVVPRE 334


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 2 GPAGVVPT 9
GP G++P+
Sbjct: 414 GPGGIMPS 421


>sp|NAH2_METJA|PROBABLE Na(+)/H(+) antiporter 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GPAGVVP 8
GP GVVP
Sbjct: 347 GPRGVVP 353


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 1 MGPAGVVPT 9
M P G VPT
Sbjct: 457 MAPTGEVPT 465


>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 2 GPAGVVPTE 10
P GVVP E
Sbjct: 337 SPIGVVPQE 345


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GPAGVVP 8
GPAG+ P
Sbjct: 97 GPAGIFP 103




95|SequenceR|480|471|TSVSGMGPAG

>sp|PHAC_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula marismortui (strain ATCC 43049

Query: 2 SVSGMGP 8
SVSG+GP
Sbjct: 426 SVSGIGP 432


>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 2 SVSGMGP 8
SVSG+GP
Sbjct: 425 SVSGIGP 431


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TSVSGMGPA 9
T GMGPA
Sbjct: 570 TKAEGMGPA 578


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SVSGMGPAG 10
+V G GPAG
Sbjct: 12 AVVGAGPAG 20


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VSGMGPAG 10
VSGM P+G
Sbjct: 70 VSGMMPSG 77


>sp|FEN_HALWD|FLAP endonuclease 1|Haloquadratum walsbyi (strain DSM 16790

Query: 3 VSGMGPA 9
+SG+GPA
Sbjct: 230 ISGIGPA 236


>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 VSGMGPAG 10
V+G+GP+G
Sbjct: 69 VTGVGPSG 76


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 TSVSGMGPAG 10
T SG GP+G
Sbjct: 375 TPGSGFGPSG 384


>sp|COFH_HALSA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Halobacterium salinarum (strain ATCC

Query: 1 TSVSGMGPA 9
TSVSG+ PA
Sbjct: 138 TSVSGLHPA 146


>sp|KHSE_THEGJ|HOMOSERINE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SVSGMGPA 9
SVSG GPA
Sbjct: 245 SVSGSGPA 252


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 TSVSGMGPAG 10
T SG GP+G
Sbjct: 374 TPGSGFGPSG 383


>sp|GGR_ARCFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VSGMGPAG 10
V G GPAG
Sbjct: 6 VVGAGPAG 13


>sp|RL32_HALMA|LARGE ribosomal subunit protein eL32|Haloarcula marismortui (strain

Query: 1 TSVSGMGPA 9
T +SG+GP+
Sbjct: 18 TDISGVGPS 26


>sp|Y1105_PYRIL|MEMO1 family protein Pisl_1105|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SVSGMGPAG 10
S+ G+GP G
Sbjct: 231 SICGIGPIG 239


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 3 VSGMGPAG 10
++G+GPAG
Sbjct: 70 LAGLGPAG 77


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 SVSGMGPA 9
++SG GPA
Sbjct: 254 TISGSGPA 261


>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SVSGMGPAG 10
S+ G+GP G
Sbjct: 231 SICGLGPIG 239


>sp|KHSE_META3|HOMOSERINE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SVSGMGPA 9
++SG GPA
Sbjct: 264 TISGSGPA 271


>sp|KHSE_METVS|HOMOSERINE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 SVSGMGPA 9
++SG GPA
Sbjct: 255 TISGSGPA 262


>sp|KHSE_METM5|HOMOSERINE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 SVSGMGPA 9
++SG GPA
Sbjct: 254 TISGSGPA 261


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 SVSGMGPAG 10
+VSG GP G
Sbjct: 3432 NVSGTGPVG 3440


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 3 VSGMGPAG 10
V G GPAG
Sbjct: 12 VVGAGPAG 19


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 3 VSGMGPAG 10
V G GPAG
Sbjct: 12 VVGAGPAG 19


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 3 VSGMGPAG 10
V G GPAG
Sbjct: 9 VIGAGPAG 16


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 3 VSGMGPAG 10
V G GPAG
Sbjct: 12 VVGAGPAG 19




96|SequenceR|485|476|EDDPETSVSG

>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DDPETSVSG 10
+DPE +VSG
Sbjct: 295 NDPENNVSG 303


>sp|Y511_METAC|UPF0228 protein MA_0511|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DPETSVSG 10
DPE+ VSG
Sbjct: 36 DPESQVSG 43


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 EDDPETS 7
+DDPET+
Sbjct: 526 QDDPETA 532


>sp|PSTB_METKA|PHOSPHATE import ATP-binding protein PstB|Methanopyrus kandleri (strain AV19

Query: 2 DDPETSVSG 10
DDP +++SG
Sbjct: 143 DDPASALSG 151


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 DDPETSVS 9
DDPE +S
Sbjct: 422 DDPEEKIS 429


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EDDPETS 7
EDDPE S
Sbjct: 343 EDDPERS 349


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 DDPETSVS 9
DDPET +S
Sbjct: 511 DDPETLLS 518


>sp|TBPE_HALSA|TATA-BOX-BINDING protein E|Halobacterium salinarum (strain ATCC 700922

Query: 1 EDDPETSVS 9
EDDPE V
Sbjct: 94 EDDPEIVVQ 102




97|SequenceR|490|481|HKLGEEDDPE

>sp|GATA_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 2 KLGEEDDP 9
KLGE+ DP
Sbjct: 365 KLGEKSDP 372


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HKLGEEDDPE 10
HK+G EDD E
Sbjct: 495 HKIGGEDDRE 504


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 3 LGEEDDPE 10
LG+ DDPE
Sbjct: 403 LGQTDDPE 410


>sp|GATA_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus vannielii (strain ATCC

Query: 1 HKLGEEDDP 9
HK+GEE P
Sbjct: 365 HKIGEELSP 373


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GEEDDPE 10
GEE DPE
Sbjct: 273 GEEVDPE 279


>sp|Y1593_PYRAB|PROTEIN PYRAB15930|Pyrococcus abyssi (strain GE5 /

Query: 1 HKLGEEDDPE 10
HK G DDPE
Sbjct: 108 HKKGLIDDPE 117


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 HKLGEEDDP 9
HKLGE+ P
Sbjct: 365 HKLGEDVSP 373


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 3 LGEEDDPE 10
LG+ +DPE
Sbjct: 416 LGQTEDPE 423


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 HKLGEEDDP 9
HKLGE+ P
Sbjct: 365 HKLGEDLSP 373


>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HKLGEEDDP 9
KLGE D+P
Sbjct: 621 RKLGEGDNP 629


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 HKLGEEDDP 9
HKLGE+ P
Sbjct: 365 HKLGEDLSP 373


>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 1 HKLGEEDDP 9
H LGEE +P
Sbjct: 389 HTLGEELEP 397


>sp|RS8E_PYRCJ|SMALL ribosomal subunit protein eS8|Pyrobaculum calidifontis (strain

Query: 2 KLGEED 7
KLGEED
Sbjct: 40 KLGEED 45


>sp|RS8E_PYRAR|SMALL ribosomal subunit protein eS8|Pyrobaculum arsenaticum (strain DSM

Query: 2 KLGEED 7
KLGEED
Sbjct: 40 KLGEED 45


>sp|RS24_HALSA|SMALL ribosomal subunit protein eS24|Halobacterium salinarum (strain

Query: 3 LGEEDDP 9
LG+ED+P
Sbjct: 6 LGQEDNP 12


>sp|RS24_HALS3|SMALL ribosomal subunit protein eS24|Halobacterium salinarum (strain

Query: 3 LGEEDDP 9
LG+ED+P
Sbjct: 6 LGQEDNP 12


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 HKLGEEDDP 9
HKLGE P
Sbjct: 365 HKLGENLSP 373


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HKLGEEDDPE 10
+L E DDPE
Sbjct: 551 RRLDERDDPE 560


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 HKLGEEDDPE 10
H LG+ DD +
Sbjct: 334 HPLGDADDAD 343


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 HKLGEEDDPE 10
H LG+ DD +
Sbjct: 334 HPLGDADDAD 343




98|SequenceR|495|486|AQQELHKLGE

>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QELHKLG 9
+ELHK+G
Sbjct: 66 KELHKIG 72


>sp|RS19E_METJA|SMALL ribosomal subunit protein eS19|Methanocaldococcus jannaschii

Query: 1 AQQELHKLG 9
A QEL KLG
Sbjct: 100 ALQELEKLG 108


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 3 QELHKLG 9
+E+HK+G
Sbjct: 284 EEIHKMG 290


>sp|HEM3_METKA|PROBABLE porphobilinogen deaminase|Methanopyrus kandleri (strain AV19 /

Query: 5 LHKLGE 10
LHKLGE
Sbjct: 53 LHKLGE 58


>sp|ARGC_METKA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanopyrus kandleri (strain AV19 /

Query: 2 QQELHKLGE 10
+QEL KLG+
Sbjct: 216 RQELGKLGD 224




99|SequenceR|500|491|AVMKEAQQEL

***** No hits found ******


100|SequenceR|505|496|SDQLYAVMKE

>sp|TRUB_THEON|PROBABLE tRNA pseudouridine synthase B|Thermococcus onnurineus (strain NA1)

Query: 2 DQLYAVMKE 10
D++YAVMKE
Sbjct: 123 DKIYAVMKE 131


>sp|DAPB_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SDQLYAVMKE 10
SD+L AV+KE
Sbjct: 61 SDELEAVLKE 70


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SDQLYAVMKE 10
SDQLYA E
Sbjct: 367 SDQLYAAYAE 376


>sp|DAPB_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C7 /

Query: 1 SDQLYAVMKE 10
SD+L A++KE
Sbjct: 61 SDELEAILKE 70


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 1 SDQLYAVMKE 10
SDQLYA E
Sbjct: 368 SDQLYAYYAE 377


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 1 SDQLYAVMKE 10
SDQ+YA E
Sbjct: 367 SDQMYAAYAE 376


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SDQLYAVMKE 10
SDQLYA E
Sbjct: 375 SDQLYAAYAE 384


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 700922

Query: 1 SDQLYAVMKE 10
SDQLYA E
Sbjct: 375 SDQLYAAYAE 384


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 1 SDQLYAVMKE 10
SDQLYA E
Sbjct: 375 SDQLYAAYAE 384


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 DQLYAVMK 9
D++YA+M+
Sbjct: 106 DEIYAIMR 113


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 1 SDQLYAVMKE 10
SDQ+YA E
Sbjct: 368 SDQMYAAYAE 377


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SDQLYAVMK 9
SDQ YA +K
Sbjct: 526 SDQAYAALK 534


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SDQLYAVMKE 10
SDQLYA E
Sbjct: 367 SDQLYAGYAE 376


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 1 SDQLYAVMKE 10
SDQLY+ E
Sbjct: 374 SDQLYSAYAE 383


>sp|MAP2_METJA|METHIONINE aminopeptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DQLYAVMKE 10
D LY V+KE
Sbjct: 116 DALYTVIKE 124


>sp|DAPB_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C5 /

Query: 1 SDQLYAVMKE 10
SD+L V+KE
Sbjct: 61 SDELEVVLKE 70


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 SDQLYAVMKE 10
SDQ+YA E
Sbjct: 372 SDQMYAAYAE 381


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 SDQLYAVMK 9
SDQ Y V K
Sbjct: 481 SDQFYTVCK 489


>sp|CDC6_THEKO|ORC1-TYPE DNA replication protein|Thermococcus kodakarensis (strain ATCC

Query: 1 SDQLYAVMKE 10
+D++YA +KE
Sbjct: 132 TDEVYAKLKE 141


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SDQLYAVMKE 10
SDQ+YA E
Sbjct: 376 SDQMYAAYAE 385


>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 2 DQLYAVMKE 10
D+LYA+ KE
Sbjct: 267 DELYALEKE 275




101|SequenceR|510|501|EDDLASDQLY

>sp|RL31_METMA|LARGE ribosomal subunit protein eL31|Methanosarcina mazei (strain ATCC

Query: 2 DDLASDQLY 10
DD+ +Q+Y
Sbjct: 7 DDMVKEQIY 15


>sp|RL31_METAC|LARGE ribosomal subunit protein eL31|Methanosarcina acetivorans (strain

Query: 2 DDLASDQLY 10
DD+ +Q+Y
Sbjct: 3 DDMVKEQIY 11




102|SequenceR|515|506|KSALREDDLA

>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KSALREDDLA 10
++ALREDD+A
Sbjct: 197 EAALREDDVA 206


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KSALREDD 8
K ALRE+D
Sbjct: 677 KDALREED 684




103|SequenceR|520|511|RHEQLKSALR

>sp|PFDB_METAR|PREFOLDIN subunit beta|Methanocella arvoryzae (strain DSM 22066

Query: 2 HEQLKSAL 9
EQLKSAL
Sbjct: 104 QEQLKSAL 111


>sp|Y709_METJA|UNCHARACTERIZED transporter MJ0709|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HEQLKSALR 10
HE+L ALR
Sbjct: 354 HEELVKALR 362


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 1 RHEQLKSALR 10
RHE+LK R
Sbjct: 662 RHEELKGKTR 671




104|SequenceR|525|516|SVGKARHEQL

>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VGKARHEQL 10
VGKAR+E++
Sbjct: 1202 VGKARYEEV 1210


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 2 VGKARHE 8
VGKA+HE
Sbjct: 178 VGKAQHE 184


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VGKARHE 8
VGKA+HE
Sbjct: 178 VGKAQHE 184


>sp|GLNA_PYRHO|GLUTAMINE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VGKARHE 8
VGKA+HE
Sbjct: 182 VGKAQHE 188


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 VGKARHE 8
VGKA+HE
Sbjct: 178 VGKAQHE 184


>sp|GLNA_THEKO|GLUTAMINE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VGKARHE 8
VGKA+HE
Sbjct: 182 VGKAQHE 188


>sp|THIM_METS3|HYDROXYETHYLTHIAZOLE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SVGKARHEQL 10
++GK HEQ+
Sbjct: 70 NIGKLSHEQV 79


>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 3 GKARHEQ 9
G+ARH+Q
Sbjct: 236 GQARHDQ 242


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 KARHEQL 10
KARH QL
Sbjct: 258 KARHRQL 264


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 SVGKARH 7
+VGKA+H
Sbjct: 480 AVGKAKH 486


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SVGKARH 7
+VGKA+H
Sbjct: 482 AVGKAKH 488




105|SequenceR|530|521|HMLPISVGKA

>sp|RRP41_NITMS|EXOSOME complex component Rrp41|Nitrosopumilus maritimus (strain SCM1)

Query: 1 HMLPISVGK 9
HM P SVG+
Sbjct: 80 HMEPFSVGE 88


>sp|TRUB_NANEQ|PROBABLE tRNA pseudouridine synthase B|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 MLPISVGKA 10
+LPI++G+A
Sbjct: 99 VLPIAIGEA 107


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 1 HMLPISVGK 9
H +P+S GK
Sbjct: 304 HTIPLSWGK 312


>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MLPISVGKA 10
++P+ +GKA
Sbjct: 307 VVPVEIGKA 315




106|SequenceR|535|526|KQMAEHMLPI

>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 KQMAEHMLPI 10
+ AEH LPI
Sbjct: 167 ESFAEHTLPI 176


>sp|PUR2_METMJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 MAEHMLP 9
+A+HMLP
Sbjct: 232 LADHMLP 238


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 3 MAEHMLP 9
M +HMLP
Sbjct: 230 MPDHMLP 236


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 KQMAEHML 8
K++AEH++
Sbjct: 296 KELAEHLM 303


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 1 KQMAEHML 8
K++AEH++
Sbjct: 294 KELAEHLM 301




107|SequenceR|540|531|DKYYWKQMAE

>sp|BSUHB_METTH|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE thermautotrophicus (strain ATCC 29096

Query: 1 DKYYWKQMA 9
D YYWK +A
Sbjct: 5 DIYYWKGVA 13


>sp|RLME_THEVO|RIBOSOMAL RNA large subunit methyltransferase|Thermoplasma volcanium

Query: 1 DKYYWKQMAE 10
D+YYWK E
Sbjct: 7 DEYYWKAKKE 16


>sp|SURE2_PYRAE|5'-NUCLEOTIDASE SurE 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DKYYWK 6
+KYYW+
Sbjct: 190 EKYYWR 195


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 3 YYWKQMA 9
YYW Q++
Sbjct: 477 YYWDQIS 483


>sp|HDRE_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina thermophila

Query: 2 KYYWKQMAE 10
K +WKQ+ E
Sbjct: 68 KTWWKQVTE 76


>sp|RLME_THEAC|RIBOSOMAL RNA large subunit methyltransferase|Thermoplasma acidophilum

Query: 1 DKYYWK 6
D+YYW+
Sbjct: 7 DQYYWR 12


>sp|RLME_ARCFU|RIBOSOMAL RNA large subunit methyltransferase|Archaeoglobus fulgidus

Query: 1 DKYYWKQMAE 10
D YYWK E
Sbjct: 6 DYYYWKAKKE 15


>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DKYYWK 6
DKY WK
Sbjct: 272 DKYRWK 277


>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DKYYW 5
+KYYW
Sbjct: 175 NKYYW 179


>sp|Y1331_ARCFU|UNCHARACTERIZED protein AF_1331|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YWKQMAE 10
YWK++AE
Sbjct: 192 YWKKLAE 198


>sp|RLME_METBU|RIBOSOMAL RNA large subunit methyltransferase|Methanococcoides burtonii

Query: 1 DKYYWKQMAE 10
D YYW+ E
Sbjct: 7 DTYYWRAKDE 16


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKYYWK 6
DKYYW+
Sbjct: 276 DKYYWQ 281


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DKYYWKQMAE 10
D Y W Q+ E
Sbjct: 275 DLYEWSQIVE 284


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 1 DKYYWKQMAE 10
D YY+ +M+E
Sbjct: 84 DPYYYLRMSE 93


>sp|ARLY_SACS2|ARGININOSUCCINATE lyase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DKYYW 5
+KYYW
Sbjct: 311 NKYYW 315




108|SequenceR|545|536|IEGQPDKYYW

>sp|CAS1A_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IEGQPDKYYW 10
IEG+ K+YW
Sbjct: 167 IEGKASKHYW 176


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain

Query: 1 IEGQPDKY 8
+EGQP+ Y
Sbjct: 83 VEGQPNDY 90


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IEGQPDKYYW 10
+E PD+ YW
Sbjct: 504 VEKMPDELYW 513


>sp|PCP_THEON|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus onnurineus (strain NA1)

Query: 2 EGQPDKYY 9
EG PD Y+
Sbjct: 104 EGAPDAYF 111


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 3 GQPDKYYW 10
G+PDK Y+
Sbjct: 169 GEPDKVYF 176


>sp|HEM3_HYPBU|PROBABLE porphobilinogen deaminase|Hyperthermus butylicus (strain DSM 5456

Query: 1 IEGQPDK 7
+EG PDK
Sbjct: 274 VEGDPDK 280


>sp|Y1037_META3|UPF0179 protein Maeo_1037|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EGQPDKY 8
EG P+KY
Sbjct: 113 EGMPEKY 119


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 IEGQPDKYYW 10
IEGQ YW
Sbjct: 162 IEGQASHEYW 171


>sp|KADA_THEAC|ADENYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EGQPDK 7
EG+PDK
Sbjct: 166 EGKPDK 171


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 QPDKYYW 10
+PDKY++
Sbjct: 487 KPDKYWY 493


>sp|RL30_NITMS|LARGE ribosomal subunit protein uL30|Nitrosopumilus maritimus (strain

Query: 1 IEGQPDKYYW 10
I+GQ D YW
Sbjct: 10 IKGQADCPYW 19


>sp|HIS4_METVS|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii (strain

Query: 1 IEGQPDK 7
I+G PDK
Sbjct: 18 IQGNPDK 24


>sp|HIS4_METVA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii

Query: 1 IEGQPDK 7
I+G PDK
Sbjct: 18 IQGNPDK 24


>sp|HIS4_METM6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 1 IEGQPDK 7
I+G PDK
Sbjct: 18 IQGNPDK 24


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 1 IEGQPDKYYW 10
+EG PD Y+
Sbjct: 29 LEGNPDLVYF 38


>sp|HIS4_METMP|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 1 IEGQPDKYY 9
I+G PDK +
Sbjct: 18 IQGNPDKKH 26


>sp|HIS5_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 1 IEGQPDKYYW 10
+EG D+Y++
Sbjct: 129 LEGAEDEYFY 138


>sp|HIS4_METM7|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 1 IEGQPDKYY 9
I+G PDK +
Sbjct: 18 IQGNPDKKH 26


>sp|HIS4_METM5|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 1 IEGQPDKYY 9
I+G PDK +
Sbjct: 18 IQGNPDKKH 26


>sp|HIS4_META3|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus aeolicus (strain

Query: 1 IEGQPDKYY 9
I+G PDK +
Sbjct: 18 IQGNPDKKH 26


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 4 QPDKYYW 10
+P+K YW
Sbjct: 517 KPEKQYW 523


>sp|TRUA_HALMA|TRNA pseudouridine synthase A|Haloarcula marismortui (strain ATCC

Query: 2 EGQPDKY 8
EG PD+Y
Sbjct: 43 EGLPDRY 49


>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 QPDKYY 9
QP++YY
Sbjct: 235 QPERYY 240


>sp|PYRE_PYRAR|OROTATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM

Query: 3 GQPDKYYW 10
G PD + W
Sbjct: 35 GHPDLFQW 42


>sp|XACG_HALVD|XYLOSE/ARABINOSE-BINDING protein XacG|Haloferax volcanii (strain ATCC 29605

Query: 1 IEGQPDK 7
IEG PD+
Sbjct: 262 IEGNPDR 268


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IEGQPDKYY 9
++G PD Y+
Sbjct: 220 MKGMPDDYF 228


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 5 PDKYY 9
PDKYY
Sbjct: 113 PDKYY 117


>sp|CSX1_SACS2|CRISPR system endoribonuclease Csx1|Saccharolobus solfataricus (strain

Query: 2 EGQPDKYY 9
+G+PD Y+
Sbjct: 96 KGKPDHYF 103


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 IEGQPDKYYW 10
I+G D+ YW
Sbjct: 84 IKGFEDEVYW 93


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 5 PDKYY 9
PDKYY
Sbjct: 14 PDKYY 18




109|SequenceR|550|541|NFPGQIEGQP

>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PGQIEGQP 10
P Q+EG P
Sbjct: 249 PQQVEGNP 256


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 NFPGQIEG 8
N P QIEG
Sbjct: 1125 NTPAQIEG 1132


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 NFPGQIEGQP 10
N P +I+G+P
Sbjct: 246 NIPIEIDGEP 255


>sp|KDPC_THEVO|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FPGQIEGQP 10
P Q EGQP
Sbjct: 35 LPNQSEGQP 43


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 NFPGQIEGQP 10
+FP I+ QP
Sbjct: 256 HFPNPIDAQP 265


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 NFPGQIEGQP 10
+FP I+ QP
Sbjct: 256 HFPNPIDAQP 265


>sp|GGGPS_METJA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FPGQIEG 8
FPG ++G
Sbjct: 77 FPGNVDG 83


>sp|GGGPS_METVS|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FPGQIEG 8
FPG ++G
Sbjct: 77 FPGNVDG 83


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 NFPGQIEGQP 10
+FP I+ QP
Sbjct: 257 HFPNPIDAQP 266


>sp|IXTPA_METAC|DITP/XTP pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FPGQIEGQ 9
FPG +EG+
Sbjct: 124 FPGVVEGK 131


>sp|GGGPS_METM7|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 2 FPGQIEG 8
FPG ++G
Sbjct: 77 FPGNVDG 83


>sp|GGGPS_METMP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FPGQIEG 8
FPG ++G
Sbjct: 77 FPGNVDG 83


>sp|GGGPS_METM6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 2 FPGQIEG 8
FPG ++G
Sbjct: 77 FPGNVDG 83


>sp|GGGPS_METM5|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 2 FPGQIEG 8
FPG ++G
Sbjct: 77 FPGNVDG 83


>sp|IXTPA_METMA|DITP/XTP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FPGQIEGQ 9
FPG +EG+
Sbjct: 124 FPGVVEGK 131


>sp|GGGPS_META3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FPGQIEG 8
FPG ++G
Sbjct: 75 FPGNVDG 81




110|SequenceR|555|546|AMEQNNFPGQ

>sp|PUR2_PYRHO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MEQNNFPGQ 10
ME+NN PG+
Sbjct: 111 MERNNIPGR 119


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 AMEQNNF 7
AMEQN+F
Sbjct: 633 AMEQNHF 639


>sp|PUR2_PYRAB|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 MEQNNFPGQ 10
ME+N+ PG+
Sbjct: 111 MERNDIPGR 119


>sp|PUR2_PYRFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MEQNNFPGQ 10
ME+N PG+
Sbjct: 112 MERNKIPGR 120


>sp|PUR2_THEGJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 MEQNNFPGQ 10
ME+N PG+
Sbjct: 111 MERNEIPGR 119




111|SequenceR|560|551|AQFWEAMEQN

>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FWEAMEQN 10
FWEA+ +N
Sbjct: 308 FWEALVEN 315


>sp|IF5A_PICTO|TRANSLATION initiation factor 5A|Picrophilus torridus (strain ATCC 700027

Query: 3 FWEAMEQ 9
+WEAM Q
Sbjct: 116 YWEAMGQ 122


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 3 FWEAME 8
FW+AM+
Sbjct: 231 FWDAMD 236


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 FWEAMEQ 9
FWEA+++
Sbjct: 844 FWEALKE 850


>sp|REG5_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1055|Pyrococcus horikoshii

Query: 3 FWEAME 8
FW+A+E
Sbjct: 153 FWDALE 158


>sp|GLPK_PYRFU|GLYCEROL kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FWEAMEQ 9
+WE+ME+
Sbjct: 442 YWESMEE 448




112|SequenceR|565|556|MTFYGAQFWE

>sp|THIE_THEVO|THIAMINE-PHOSPHATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FYGAQFWE 10
+YGA+F+E
Sbjct: 16 YYGAEFYE 23


>sp|SYH_NANEQ|HISTIDINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 FYGAQFWE 10
FY +FWE
Sbjct: 219 FYPKEFWE 226


>sp|CBIT_SULAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 FYGAQF 8
FYGA+F
Sbjct: 35 FYGAKF 40


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TFYGAQFWE 10
T Y ++WE
Sbjct: 18 TIYDERYWE 26




113|SequenceR|570|561|KVLLSMTFYG

***** No hits found ******


114|SequenceR|575|566|EDCARKVLLS

>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EDCARK 6
EDCA+K
Sbjct: 330 EDCAKK 335


>sp|PUR5_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 ARKVLLS 10
ARKVLLS
Sbjct: 197 ARKVLLS 203




115|SequenceR|580|571|LPQFSEDCAR

>sp|MPTA_METVS|GTP cyclohydrolase MptA|Methanococcus vannielii (strain ATCC 35089

Query: 2 PQFSEDCAR 10
P+F EDCAR
Sbjct: 253 PKFVEDCAR 261


>sp|MPTA_METMP|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain DSM 14266

Query: 2 PQFSEDCAR 10
P+F EDCAR
Sbjct: 253 PKFVEDCAR 261


>sp|MPTA_METM7|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C7 /

Query: 2 PQFSEDCAR 10
P+F EDCAR
Sbjct: 253 PKFVEDCAR 261


>sp|MPTA_METM6|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C6 /

Query: 2 PQFSEDCAR 10
P+F EDCAR
Sbjct: 253 PKFVEDCAR 261


>sp|MPTA_METM5|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C5 /

Query: 2 PQFSEDCAR 10
P+F EDCAR
Sbjct: 253 PKFVEDCAR 261


>sp|MPTA_META3|GTP cyclohydrolase MptA|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PQFSEDCAR 10
P+F EDCAR
Sbjct: 251 PKFVEDCAR 259


>sp|MPTA_METJA|GTP cyclohydrolase MptA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PQFSEDCAR 10
P+F EDC R
Sbjct: 252 PKFVEDCVR 260


>sp|MPTA1_METAR|GTP cyclohydrolase MptA 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 PQFSEDCAR 10
P+F EDC R
Sbjct: 251 PKFVEDCVR 259


>sp|MPTA2_METAR|GTP cyclohydrolase MptA 2|Methanocella arvoryzae (strain DSM 22066

Query: 2 PQFSEDCAR 10
P+F EDC R
Sbjct: 250 PKFVEDCVR 258


>sp|MPTA_METBF|GTP cyclohydrolase MptA|Methanosarcina barkeri (strain Fusaro /

Query: 2 PQFSEDCAR 10
P+F EDC R
Sbjct: 259 PKFVEDCVR 267


>sp|MPTA_METMA|GTP cyclohydrolase MptA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PQFSEDCAR 10
P+F EDC R
Sbjct: 259 PKFVEDCVR 267


>sp|MPTA_METAC|GTP cyclohydrolase MptA|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PQFSEDCAR 10
P+F EDC R
Sbjct: 259 PKFVEDCVR 267


>sp|MPTA_METBU|GTP cyclohydrolase MptA|Methanococcoides burtonii (strain DSM 6242

Query: 2 PQFSEDCAR 10
P+F EDC R
Sbjct: 257 PKFVEDCVR 265


>sp|MPTA_METKA|GTP cyclohydrolase MptA|Methanopyrus kandleri (strain AV19 /

Query: 2 PQFSEDCAR 10
P+F EDC R
Sbjct: 266 PKFVEDCVR 274


>sp|MPTA_METMJ|GTP cyclohydrolase MptA|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PQFSEDCAR 10
P+F EDC R
Sbjct: 251 PRFVEDCVR 259


>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 2 PQFSEDCAR 10
P+F EDC R
Sbjct: 261 PRFVEDCVR 269


>sp|MPTA_METHJ|GTP cyclohydrolase MptA|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PQFSEDCAR 10
P+F EDC R
Sbjct: 263 PRFVEDCVR 271


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 2 PQFSEDC 8
PQ +EDC
Sbjct: 592 PQLTEDC 598


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus (strain

Query: 2 PQFSEDCAR 10
P F EDC R
Sbjct: 253 PMFVEDCVR 261


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 2 PQFSEDC 8
PQ +EDC
Sbjct: 592 PQLTEDC 598


>sp|MPTA_METTP|GTP cyclohydrolase MptA|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PQFSEDCAR 10
P F EDC R
Sbjct: 251 PMFVEDCVR 259


>sp|MPTA_METST|GTP cyclohydrolase MptA|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PQFSEDCAR 10
P F EDC R
Sbjct: 254 PVFVEDCVR 262


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LPQFSEDCA 9
PQ EDCA
Sbjct: 504 FPQVIEDCA 512


>sp|MPTA_METS3|GTP cyclohydrolase MptA|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PQFSEDCAR 10
P F EDC R
Sbjct: 252 PVFVEDCVR 260


>sp|SYS_HALLT|SERINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LPQFSEDCAR 10
LP+F+ED R
Sbjct: 213 LPKFTEDAYR 222


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LPQFSEDCAR 10
LP+F+ED R
Sbjct: 214 LPKFAEDAYR 223


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 2 PQFSEDC 8
PQ ++DC
Sbjct: 592 PQLTDDC 598


>sp|Y400_METKA|UPF0200 protein MK0400|Methanopyrus kandleri (strain AV19 /

Query: 1 LPQFSEDC 8
LP+F E C
Sbjct: 163 LPEFREKC 170


>sp|Y2181_ARCFU|UNCHARACTERIZED protein AF_2181|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 FSEDC 8
FSEDC
Sbjct: 196 FSEDC 200


>sp|DNAJ_HALLT|CHAPERONE protein DnaJ|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 FSEDCA 9
+SEDCA
Sbjct: 213 YSEDCA 218




116|SequenceR|585|576|KMIDGLPQFS

>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MIDGLP 7
MIDGLP
Sbjct: 2 MIDGLP 7


>sp|HFLX_THEKO|GTPASE HflX|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IDGLPQF 9
IDGLP F
Sbjct: 243 IDGLPPF 249


>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 KMIDGLPQF 9
+++DG P+F
Sbjct: 20 RLLDGHPEF 28




117|SequenceR|590|581|VRGWMKMIDG

>sp|ENDA_PYRFU|TRNA-SPLICING endonuclease|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RGWMKMIDG 10
+GW+K++DG
Sbjct: 52 KGWIKVLDG 60


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 3 GWMKMIDG 10
GW K+I+G
Sbjct: 348 GWRKLIEG 355


>sp|ACYP_HALWD|ACYLPHOSPHATASE walsbyi (strain DSM 16790

Query: 1 VRGWMKMID 9
VRGW++ +D
Sbjct: 34 VRGWVRNLD 42


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 WMKMIDG 10
W K+IDG
Sbjct: 518 WNKIIDG 524


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 4 WMKMIDG 10
W+K++DG
Sbjct: 290 WIKIVDG 296


>sp|Y1207_METJA|UNCHARACTERIZED N-acetyltransferase MJ1207|Methanocaldococcus jannaschii (strain

Query: 1 VRGWMKMI 8
V+GW++M+
Sbjct: 216 VKGWLRMV 223


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 WMKMIDG 10
W +M+DG
Sbjct: 226 WQQMLDG 232


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VRGWMKMIDG 10
++ WM +++G
Sbjct: 375 IKEWMDIVEG 384


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 WMKMIDG 10
W KM+DG
Sbjct: 228 WNKMLDG 234


>sp|ENDAL_METKA|ENDA-LIKE protein|Methanopyrus kandleri (strain AV19 /

Query: 4 WMKMIDG 10
W+K+++G
Sbjct: 134 WLKLVEG 140




118|SequenceR|595|586|GPSFPVRGWM

>sp|RNZ_HALMA|RIBONUCLEASE Z|Haloarcula marismortui (strain ATCC 43049

Query: 2 PSFPVR 7
PSFPVR
Sbjct: 109 PSFPVR 114


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 GPSFPVR 7
GP +PVR
Sbjct: 509 GPDYPVR 515


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 5 PVRGWM 10
PVR WM
Sbjct: 112 PVRDWM 117


>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 GPSFPVRGW 9
G P RGW
Sbjct: 113 GKPVPYRGW 121


>sp|EF1A_CENSY|ELONGATION factor 1-alpha|Cenarchaeum symbiosum (strain A)

Query: 2 PSFPVRGW 9
P PV GW
Sbjct: 191 PFIPVSGW 198


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 1 GPSFPVRGW 9
G P RGW
Sbjct: 112 GRDVPYRGW 120


>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PSFPVRGWM 10
P+FP W+
Sbjct: 228 PAFPFHSWL 236


>sp|DPHB_METMJ|DIPHTHINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 FPVRGW 9
FP +GW
Sbjct: 137 FPAKGW 142


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 2 PSFPVRGW 9
P+F +R W
Sbjct: 277 PAFLIRNW 284




119|SequenceR|600|591|PPPAPGPSFP

>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 3 PAPGPSF 9
PAPGP F
Sbjct: 680 PAPGPEF 686


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PPPAPGP 7
PPP P P
Sbjct: 32 PPPYPAP 38


>sp|Y1412_META3|UPF0210 protein Maeo_1412|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PPPAPGPS 8
P PAPG S
Sbjct: 284 PTPAPGDS 291


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 1 PPPAPGPS 8
P PAPG S
Sbjct: 284 PTPAPGDS 291


>sp|HEM3_CALMQ|PROBABLE porphobilinogen deaminase|Caldivirga maquilingensis (strain ATCC

Query: 2 PPAPG 6
PPAPG
Sbjct: 189 PPAPG 193


>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPAPGPSF 9
PPAPG F
Sbjct: 192 PPAPGQGF 199


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPPAPG 6
PPP PG
Sbjct: 171 PPPKPG 176


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PPPAPGPS 8
P PAP P+
Sbjct: 154 PTPAPEPA 161


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PPAPGPS 8
PPAP P+
Sbjct: 259 PPAPDPA 265


>sp|AROA_THEKO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 PPPAPGPSF 9
PP P P F
Sbjct: 68 PPEEPSPGF 76




120|SequenceR|605|596|LEGMHPPPAP

>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 EGMHPPPA 9
EG+ PPPA
Sbjct: 109 EGLVPPPA 116


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 LEGMHPPPAP 10
+ G+HP P P
Sbjct: 206 VSGVHPSPVP 215


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GMHPPPAP 10
G+HP P P
Sbjct: 208 GVHPSPVP 215


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 2 EGMHPPPAP 10
+G+ PPP P
Sbjct: 167 DGLEPPPKP 175


>sp|GLYA_METMA|SERINE hydroxymethyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GMHPPPAP 10
G+HP P P
Sbjct: 208 GVHPSPVP 215


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LEGMHPPPAP 10
LEGM PAP
Sbjct: 331 LEGMGMEPAP 340


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LEGMHP 6
LEGMHP
Sbjct: 302 LEGMHP 307


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 2 EGMHPP 7
EG+HPP
Sbjct: 155 EGIHPP 160


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 EGMHPPPA 9
EG+ PPPA
Sbjct: 112 EGVVPPPA 119


>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 EGMHPP 7
EGMHPP
Sbjct: 215 EGMHPP 220


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 3 GMHPPPAP 10
GM P PAP
Sbjct: 156 GMLPVPAP 163


>sp|PFDB_METMJ|PREFOLDIN subunit beta|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LEGMHPPPAP 10
LEG PP P
Sbjct: 111 LEGKQQPPGP 120


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 1 LEGMHPPPAP 10
L+ + PPP P
Sbjct: 220 LDSLEPPPKP 229


>sp|EF1A_CALMQ|ELONGATION factor 1-alpha|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LEGMHPPPAP 10
L+ + PPP P
Sbjct: 227 LDAIEPPPRP 236


>sp|CPS_METS3|CARBAMOYL-PHOSPHATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LEGMHP 6
LEG+HP
Sbjct: 209 LEGIHP 214


>sp|Y791_METB6|UPF0316 protein Mboo_0791|Methanoregula boonei (strain DSM 21154

Query: 3 GMHPPPA 9
G H PPA
Sbjct: 10 GFHAPPA 16


>sp|SYY_METVS|TYROSINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LEGMHP 6
+EG+HP
Sbjct: 291 IEGLHP 296


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 1 LEGMHPPPAP 10
L+G +P P P
Sbjct: 451 LDGDYPTPLP 460


>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 4 MHPPPAP 10
MHP P+P
Sbjct: 1 MHPRPSP 7


>sp|AROA_HALS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 EGMHP 6
EGMHP
Sbjct: 261 EGMHP 265


>sp|AROA_HALSA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 EGMHP 6
EGMHP
Sbjct: 270 EGMHP 274




121|SequenceR|610|601|LREQDLEGMH

>sp|RS11_METBU|SMALL ribosomal subunit protein uS11|Methanococcoides burtonii (strain

Query: 1 LREQDLEGMH 10
LR++ LEG+H
Sbjct: 63 LRDKGLEGVH 72


>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LREQDLEGM 9
LRE D++GM
Sbjct: 281 LRESDIKGM 289


>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 3 EQDLEGMH 10
EQD +GMH
Sbjct: 164 EQDTKGMH 171


>sp|FOLD_METPE|BIFUNCTIONAL protein FolD|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LREQDLEGMH 10
L E+D++G H
Sbjct: 108 LPEKDVDGFH 117


>sp|FOLD_METHJ|BIFUNCTIONAL protein FolD|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LREQDLEGMH 10
L E+D++G H
Sbjct: 108 LPEKDVDGFH 117


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 LREQDLEGMH 10
L+E + EG H
Sbjct: 89 LKEMETEGYH 98


>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 LREQDLEGM 9
+RE DLEG+
Sbjct: 128 MRELDLEGV 136


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 LREQDLEGM 9
+RE DLEG+
Sbjct: 128 MRELDLEGV 136


>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 1 LREQDLEGM 9
L E DLEG+
Sbjct: 414 LTENDLEGL 422


>sp|GMSS1_HALMA|GLUTAMATE mutase sigma subunit 1|Haloarcula marismortui (strain ATCC 43049

Query: 4 QDLEGMH 10
QD EG+H
Sbjct: 73 QDCEGLH 79




122|SequenceR|615|606|EQQRTLREQD

>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 EQQRTLREQD 10
+Q +TL EQD
Sbjct: 367 KQSKTLAEQD 376


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 1 EQQRTLREQ 9
E QRTL+EQ
Sbjct: 406 EAQRTLQEQ 414




123|SequenceR|620|611|YLATLEQQRT

>sp|IF2P_SACS2|PROBABLE translation initiation factor IF-2|Saccharolobus solfataricus

Query: 1 YLATLEQQR 9
+LA++E+QR
Sbjct: 153 FLASIEKQR 161




124|SequenceR|625|616|LHQMQYLATL

>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LHQMQYLA 8
LH+M+YL+
Sbjct: 82 LHEMEYLS 89


>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 1 LHQMQYLAT 9
+H M+YL+T
Sbjct: 138 IHAMEYLST 146


>sp|DNAJ_METMZ|CHAPERONE protein DnaJ|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 LHQMQYLA 8
LHQ +YL+
Sbjct: 345 LHQFEYLS 352


>sp|DNAJ_METMA|CHAPERONE protein DnaJ|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LHQMQYLA 8
LHQ +YL+
Sbjct: 345 LHQFEYLS 352


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LHQMQYLAT 9
LH ++Y AT
Sbjct: 230 LHDLEYAAT 238


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HQMQYLAT 9
HQ+ Y+AT
Sbjct: 184 HQIPYVAT 191




125|SequenceR|630|621|FQQYQLHQMQ

>sp|TRPD_SULAC|ANTHRANILATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 QQYQLH 7
QQY+LH
Sbjct: 237 QQYRLH 242




126|SequenceR|635|626|QQQILFQQYQ

>sp|MCH_ARCFU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QILFQQYQ 10
++LFQ YQ
Sbjct: 304 EVLFQSYQ 311


>sp|KPTA1_ARCFU|PROBABLE RNA 2'-phosphotransferase 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 QQQILFQQY 9
++QI+F QY
Sbjct: 205 KRQIVFNQY 213


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 1 QQQILFQQYQ 10
Q +ILF YQ
Sbjct: 536 QNKILFVSYQ 545




127|SequenceR|640|631|LVQAYQQQIL

>sp|MTRA_METMS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanohalophilus mahii (strain ATCC

Query: 2 VQAYQQQI 9
VQ YQ+QI
Sbjct: 122 VQRYQEQI 129


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVQAYQQQI 9
+VQ YQQ+I
Sbjct: 289 IVQGYQQEI 297


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LVQAYQQQIL 10
+++ YQQ+IL
Sbjct: 420 ILKKYQQEIL 429




128|SequenceR|645|636|KQQQALVQAY

***** No hits found ******


129|SequenceR|650|641|SSLAAKQQQA

***** No hits found ******


130|SequenceR|655|646|QQQQQSSLAA

***** No hits found ******


131|SequenceR|660|651|LLLALQQQQQ

***** No hits found ******


132|SequenceR|665|656|TQFQQLLLAL

***** No hits found ******


133|SequenceR|670|661|IRMKLTQFQQ

***** No hits found ******


134|SequenceR|675|666|INQDSIRMKL

>sp|GPMA_METVS|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC

Query: 1 INQDSIRMK 9
IN DS++MK
Sbjct: 78 INHDSVKMK 86


>sp|CDC62_HALSA|ORC1-TYPE DNA replication protein 2|Halobacterium salinarum (strain ATCC

Query: 1 INQDSIRMKL 10
+N DS+ MKL
Sbjct: 165 MNDDSVLMKL 174


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 1 INQDSIRMKL 10
+N DS+ MKL
Sbjct: 165 MNDDSVLMKL 174




135|SequenceR|680|671|TVSPIINQDS

>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 2 VSPIINQDS 10
++ ++NQDS
Sbjct: 16 IADVVNQDS 24


>sp|PYRF_HALMA|OROTIDINE 5'-phosphate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 1 TVSPIINQDS 10
TV+P + +DS
Sbjct: 120 TVNPFLGRDS 129




136|SequenceR|685|676|VSVSRTVSPI

>sp|ACDE1_METBF|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 VSVSRTVSP 9
VS SRTVSP
Sbjct: 16 VSTSRTVSP 24


>sp|AIPS_SACS2|ARCHAETIDYLINOSITOL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VSRTVSPI 10
VS+TVSP+
Sbjct: 76 VSKTVSPL 83


>sp|ACDE2_METMA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 VSVSRTVSP 9
VS S+TV+P
Sbjct: 16 VSTSKTVAP 24


>sp|ACDE1_METAC|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 VSVSRTVSP 9
VS S+TV+P
Sbjct: 16 VSTSKTVTP 24




137|SequenceR|690|681|SGTDPVSVSR

>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 1 SGTDPVSVSR 10
SG DP+S R
Sbjct: 349 SGADPLSAER 358


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TDPVSVS 9
TDPV VS
Sbjct: 152 TDPVGVS 158


>sp|HMGCS_METS3|HYDROXYMETHYLGLUTARYL-COA synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GTDPVSVSR 10
G DPV++SR
Sbjct: 26 GDDPVALSR 34


>sp|GLYA_PYRCJ|SERINE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GTDPVSVSR 10
G DP SV R
Sbjct: 388 GEDPASVRR 396


>sp|HEM3_PYRAR|PROBABLE porphobilinogen deaminase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GTDPVSVSR 10
G DPV V R
Sbjct: 275 GDDPVEVGR 283


>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SGTDPVS 7
+GTDPV+
Sbjct: 289 AGTDPVA 295


>sp|COMC_METFV|L-SULFOLACTATE dehydrogenase|Methanothermus fervidus (strain ATCC 43054

Query: 2 GTDPVSVS 9
GT+P+++S
Sbjct: 155 GTNPIAIS 162


>sp|HEM3_PYRAE|PROBABLE porphobilinogen deaminase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GTDPVSVSR 10
G DPV V R
Sbjct: 275 GEDPVEVGR 283


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 GTDPVSVS 9
GTDP SV+
Sbjct: 466 GTDPESVA 473


>sp|GCSPA_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 2 GTDPVSVS 9
G+DPV++S
Sbjct: 239 GSDPVAMS 246


>sp|GCSPA_HALS3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 2 GTDPVSVS 9
G+DPV++S
Sbjct: 239 GSDPVAMS 246




138|SequenceR|695|686|QLEWISGTDP

>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 LEWISGTDP 10
+ WISG+DP
Sbjct: 255 VRWISGSDP 263


>sp|RPO5_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus solfataricus (strain

Query: 1 QLEWISGTDP 10
QL WI +DP
Sbjct: 41 QLPWIRASDP 50


>sp|RPO5_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus shibatae (strain ATCC

Query: 1 QLEWISGTDP 10
QL WI +DP
Sbjct: 41 QLPWIRASDP 50


>sp|RPO5_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 QLEWISGTDP 10
QL WI +DP
Sbjct: 41 QLPWIRASDP 50


>sp|RPO5_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 QLEWISGTDP 10
QL WI +DP
Sbjct: 41 QLPWIRASDP 50


>sp|RPO5_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 QLEWISGTDP 10
QL WI +DP
Sbjct: 41 QLPWIRASDP 50


>sp|RPO5_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 QLEWISGTDP 10
QL WI +DP
Sbjct: 41 QLPWIRASDP 50


>sp|RPO5_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 QLEWISGTDP 10
QL WI +DP
Sbjct: 41 QLPWIRASDP 50


>sp|RPO5_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 QLEWISGTDP 10
QL WI +DP
Sbjct: 41 QLPWIRASDP 50


>sp|VHCD_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Archaeoglobus profundus (strain

Query: 1 QLEWISGTD 9
+LEWISG++
Sbjct: 104 RLEWISGSE 112


>sp|RPO5_HYPBU|DNA-DIRECTED RNA polymerase subunit Rpo5|Hyperthermus butylicus (strain DSM

Query: 1 QLEWISGTDP 10
QL W+ TDP
Sbjct: 40 QLPWLRATDP 49


>sp|RPO5_THEPD|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermofilum pendens (strain DSM 2475

Query: 1 QLEWISGTDP 10
+L WI TDP
Sbjct: 37 ELPWIYSTDP 46


>sp|RPO5_STAMF|DNA-DIRECTED RNA polymerase subunit Rpo5|Staphylothermus marinus (strain ATCC

Query: 1 QLEWISGTDP 10
QL WIS DP
Sbjct: 38 QLPWISIDDP 47


>sp|RPO5_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo5|Sulfurisphaera tokodaii (strain DSM

Query: 1 QLEWISGTDP 10
QL WI +DP
Sbjct: 41 QLPWIRASDP 50


>sp|RPO5_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo5|Sulfolobus acidocaldarius (strain

Query: 1 QLEWISGTDP 10
QL WI +DP
Sbjct: 41 QLPWIRASDP 50


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLEWISGTD 9
+L W+SG D
Sbjct: 81 KLRWVSGMD 89


>sp|RPO5_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo5|Pyrobaculum aerophilum (strain ATCC

Query: 1 QLEWISGTDP 10
QL WI +DP
Sbjct: 32 QLPWIRASDP 41


>sp|RPO5_METS5|DNA-DIRECTED RNA polymerase subunit Rpo5|Metallosphaera sedula (strain ATCC

Query: 1 QLEWISGTDP 10
QL W+ +DP
Sbjct: 40 QLPWMRASDP 49


>sp|CBIA_HALSA|COBYRINATE a,c-diamide synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 WISGTD 9
W+SGTD
Sbjct: 71 WLSGTD 76


>sp|AMZA_AERPE|ARCHAEMETZINCIN pernix (strain ATCC 700893

Query: 4 WISGTDP 10
W++ TDP
Sbjct: 36 WLASTDP 42


>sp|Y213_METKA|UPF0282 protein MK0213|Methanopyrus kandleri (strain AV19 /

Query: 2 LEWISGTDP 10
LEWI DP
Sbjct: 195 LEWILERDP 203


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LEWISGTDP 10
+ W++G DP
Sbjct: 814 ISWLTGADP 822


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 EWISGTDP 10
+W+SGT P
Sbjct: 34 KWLSGTPP 41


>sp|Y1498_SULAC|PARB-LIKE protein Saci_1498|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QLEWIS 6
QLEW+S
Sbjct: 5 QLEWVS 10


>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 2 LEWISGTD 9
L WI GT+
Sbjct: 382 LNWIKGTN 389


>sp|APGM_METM6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C6 /

Query: 2 LEWISGTD 9
L WI GT+
Sbjct: 382 LNWIKGTN 389


>sp|APGM_METM5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C5 /

Query: 2 LEWISGTD 9
L WI GT+
Sbjct: 382 LNWIKGTN 389


>sp|MDH_THEVO|MALATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LEWISGTDP 10
L+ ISG DP
Sbjct: 135 LQKISGVDP 143


>sp|Y1094_METJA|UNCHARACTERIZED protein MJ1094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EWISGTD 9
EW+ G D
Sbjct: 121 EWVEGID 127


>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LEWISG 7
+EW+SG
Sbjct: 75 MEWLSG 80


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LEWISG 7
+EW+SG
Sbjct: 75 MEWLSG 80


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 2 LEWISG 7
+EW+SG
Sbjct: 75 MEWLSG 80


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 2 LEWISG 7
+EW+SG
Sbjct: 75 MEWLSG 80


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 2 LEWISGTD 9
+EW +GTD
Sbjct: 161 IEWEAGTD 168


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 2 LEWISGTD 9
L WISG +
Sbjct: 630 LRWISGEE 637


>sp|PNCB_METMA|NICOTINATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EWISGT 8
EWI GT
Sbjct: 228 EWIMGT 233


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 WISGTDP 10
W+ G DP
Sbjct: 762 WVEGEDP 768


>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 EWISGT 8
EWI GT
Sbjct: 226 EWIMGT 231


>sp|MER_METKA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanopyrus kandleri (strain AV19 /

Query: 2 LEWISG 7
L+WISG
Sbjct: 83 LDWISG 88


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 WISGTDP 10
W+ G DP
Sbjct: 762 WVEGDDP 768


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 WISGTDP 10
W+ G DP
Sbjct: 762 WVEGDDP 768


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 WISGTDP 10
W+ G DP
Sbjct: 762 WVEGDDP 768




139|SequenceR|700|691|QSATPQLEWI

>sp|RNH2_META3|RIBONUCLEASE HII|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QSATPQLE 8
Q+ATPQ+E
Sbjct: 130 QTATPQIE 137


>sp|HTR6_HALS3|TRANSDUCER protein Htr6|Halobacterium salinarum (strain ATCC 29341

Query: 2 SATPQLEWI 10
SATP +W+
Sbjct: 266 SATPHTDWV 274


>sp|IF1A_METLZ|TRANSLATION initiation factor 1A|Methanocorpusculum labreanum (strain ATCC

Query: 4 TPQLEWI 10
TPQ++W+
Sbjct: 93 TPQVDWL 99


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 TPQLEWI 10
TP L+W+
Sbjct: 861 TPVLDWV 867


>sp|FENR_IGNH4|FERREDOXIN--NADP reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 PQLEWI 10
P LEW+
Sbjct: 239 PDLEWV 244


>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain

Query: 2 SATPQLEWI 10
S +PQ+ W+
Sbjct: 81 SISPQISWL 89


>sp|RL15E_METJA|LARGE ribosomal subunit protein eL15|Methanocaldococcus jannaschii

Query: 3 ATPQLEWI 10
A PQL W+
Sbjct: 142 ADPQLNWL 149


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 3 ATPQLEW 9
ATPQ +W
Sbjct: 517 ATPQKQW 523


>sp|IF1A_ARCFU|TRANSLATION initiation factor 1A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PQLEWI 10
PQ+EW+
Sbjct: 84 PQVEWL 89


>sp|RL3_PYRIL|LARGE ribosomal subunit protein uL3|Pyrobaculum islandicum (strain DSM

Query: 2 SATPQLEWI 10
+A PQ+ WI
Sbjct: 329 AAEPQVVWI 337


>sp|IF1A2_METBF|TRANSLATION initiation factor 1A 2|Methanosarcina barkeri (strain Fusaro /

Query: 5 PQLEWI 10
PQ+EW+
Sbjct: 103 PQVEWL 108




140|SequenceR|705|696|EWVTPQSATP

>sp|SPEE_AERPE|POLYAMINE aminopropyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EWVTPQSAT 9
EW+TP AT
Sbjct: 18 EWLTPDRAT 26


>sp|YC8A_METJA|UNCHARACTERIZED protein MJ1282.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WVTPQ 6
WVTPQ
Sbjct: 216 WVTPQ 220


>sp|FLAK_METMP|PREFLAGELLIN peptidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 WVTPQ 6
WVTPQ
Sbjct: 198 WVTPQ 202


>sp|FLAK_METM6|PREFLAGELLIN peptidase|Methanococcus maripaludis (strain C6 /

Query: 2 WVTPQ 6
WVTPQ
Sbjct: 198 WVTPQ 202


>sp|ASSY_PICTO|ARGININOSUCCINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 EWVTP 5
EWVTP
Sbjct: 197 EWVTP 201


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 2 WVTPQSATP 10
W+ PQ A P
Sbjct: 12 WMIPQDAKP 20


>sp|Y1626_PYRHO|MEMO1 family protein PH1626|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EWVTPQSA 8
EW+TP +
Sbjct: 92 EWITPMGS 99


>sp|Y114_METTH|UNCHARACTERIZED protein MTH_114|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 WVTPQSATP 10
W TP TP
Sbjct: 242 WATPSQLTP 250


>sp|APGM_IGNH4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 VTPQSATP 10
VTP ATP
Sbjct: 348 VTPDHATP 355


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 1 EWVTPQSAT 9
EW++P S T
Sbjct: 320 EWLSPDSGT 328


>sp|Y1285_SULAC|UPF0201 protein Saci_1285|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EWVTPQSA 8
+W+TP++A
Sbjct: 124 DWLTPKTA 131


>sp|ENDA_HALMA|TRNA-SPLICING endonuclease|Haloarcula marismortui (strain ATCC 43049

Query: 1 EWVTPQSATP 10
EWV + TP
Sbjct: 326 EWVAVERLTP 335


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EWVTPQ 6
EW TPQ
Sbjct: 9 EWQTPQ 14


>sp|Y949_SULTO|UPF0201 protein STK_09490|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EWVTPQSA 8
+W+TP++A
Sbjct: 124 DWLTPKTA 131




141|SequenceR|710|701|WVSGGEWVTP

>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 5 GEWVTP 10
GEW+TP
Sbjct: 101 GEWITP 106


>sp|Y1626_PYRHO|MEMO1 family protein PH1626|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GEWVTP 10
GEW+TP
Sbjct: 91 GEWITP 96


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 WVSGGEWVTP 10
WVSGG W P
Sbjct: 454 WVSGGRWKPP 463


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus

Query: 1 WVSGGEW 7
W+SG EW
Sbjct: 34 WISGDEW 40


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 5 GEWVTP 10
GEW+TP
Sbjct: 91 GEWLTP 96


>sp|Y539_PYRAB|MEMO1 family protein PYRAB05390|Pyrococcus abyssi (strain GE5 /

Query: 5 GEWVTP 10
G+WVTP
Sbjct: 91 GDWVTP 96


>sp|Y1348_METJA|UNCHARACTERIZED protein MJ1348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SGGEWV 8
SGGEW+
Sbjct: 123 SGGEWI 128


>sp|RNZ_THEVO|RIBONUCLEASE Z|Thermoplasma volcanium (strain ATCC 51530

Query: 3 SGGEWVTP 10
+GG W TP
Sbjct: 12 TGGSWPTP 19


>sp|RNZ_THEAC|RIBONUCLEASE Z|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SGGEWVTP 10
+GG W TP
Sbjct: 12 TGGSWPTP 19


>sp|KHSE_SULTO|HOMOSERINE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VSGGEWV 8
VSGG WV
Sbjct: 296 VSGGAWV 302


>sp|ASSY_PICTO|ARGININOSUCCINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 6 EWVTP 10
EWVTP
Sbjct: 197 EWVTP 201


>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 GGEWV 8
GGEWV
Sbjct: 109 GGEWV 113


>sp|Y2139_METS5|MEMO1 family protein Msed_2139|Metallosphaera sedula (strain ATCC 51363

Query: 4 GGEWVTP 10
GG+W TP
Sbjct: 99 GGDWETP 105


>sp|SDO1_PYRAB|RIBOSOME maturation protein SDO1 homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 WVSGGEWV 8
W S G W+
Sbjct: 194 WASDGSWL 201


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 5 GEWVTP 10
G W+TP
Sbjct: 91 GTWITP 96


>sp|Y35K_HALSI|UNCHARACTERIZED 36 kDa protein|Halobacterium salinarum (Halobacterium halobium)

Query: 1 WVSGGEWVTP 10
W SG +W P
Sbjct: 248 WASGRQWFRP 257


>sp|Y2090_METMA|UPF0251 protein MM_2090|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VSGGEWV 8
+SGGE+V
Sbjct: 88 ISGGEYV 94


>sp|Y132_THEON|MEMO1 family protein TON_0132|Thermococcus onnurineus (strain NA1)

Query: 5 GEWVTP 10
G W+TP
Sbjct: 91 GSWLTP 96


>sp|KHSE_SULAC|HOMOSERINE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VSGGEWV 8
++GG WV
Sbjct: 296 IAGGAWV 302


>sp|NADM_METM5|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 WVSGGEWVTP 10
WVS E +TP
Sbjct: 81 WVSSVESLTP 90


>sp|NADM_METM7|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 WVSGGEWVTP 10
WVS E +TP
Sbjct: 81 WVSSVESLTP 90


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VSGGEWV 8
V GG+WV
Sbjct: 148 VVGGKWV 154


>sp|NADM_METMP|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 WVSGGEWVTP 10
WVS E +TP
Sbjct: 81 WVSSVESLTP 90


>sp|Y1942_ARCFU|UNCHARACTERIZED protein AF_1942|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SGGEWVT 9
S GEW T
Sbjct: 94 SSGEWTT 100


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WVSGGEW 7
W+ G EW
Sbjct: 423 WIEGLEW 429




142|SequenceR|715|706|DLPLDWVSGG

>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 1 DLPLDWVSGG 10
D+P+D+++GG
Sbjct: 348 DIPIDFLTGG 357


>sp|MER_METKA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanopyrus kandleri (strain AV19 /

Query: 4 LDWVSGG 10
LDW+SGG
Sbjct: 83 LDWISGG 89


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 1 DLPL-DWVSG 9
D+PL DW+SG
Sbjct: 71 DIPLMDWLSG 80


>sp|RS15_METAR|SMALL ribosomal subunit protein uS15|Methanocella arvoryzae (strain DSM

Query: 2 LPLDWV 7
LP+DWV
Sbjct: 135 LPMDWV 140


>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LDWVSGG 10
LDWV GG
Sbjct: 235 LDWVDGG 241


>sp|Y3117_METAC|UPF0228 protein MA_3117|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLPLDWVSG 9
D P DWV G
Sbjct: 141 DGPADWVVG 149


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 PLDWVSGG 10
P++W+ GG
Sbjct: 71 PVNWMPGG 78


>sp|TRUA_METBU|TRNA pseudouridine synthase A|Methanococcoides burtonii (strain DSM 6242

Query: 2 LPLDWVSGG 10
+PL+WV G
Sbjct: 230 IPLEWVEDG 238


>sp|HEM3_METMA|PROBABLE porphobilinogen deaminase|Methanosarcina mazei (strain ATCC

Query: 1 DLPLDWVSGG 10
D PL VSGG
Sbjct: 43 DRPLHAVSGG 52


>sp|TDXH1_SULME|PEROXIREDOXIN 1|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 2 LPLDWVSG 9
LP+DW G
Sbjct: 165 LPVDWEPG 172


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DLPLDWVSG 9
++PLD VSG
Sbjct: 334 EVPLDVVSG 342


>sp|KTHY_METAC|PROBABLE thymidylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLPLDWV 7
D PL+WV
Sbjct: 111 DNPLEWV 117


>sp|MOBA_PYRAB|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus abyssi (strain

Query: 1 DLPLDW 6
DLPL W
Sbjct: 168 DLPLGW 173


>sp|HEM3_METAC|PROBABLE porphobilinogen deaminase|Methanosarcina acetivorans (strain ATCC

Query: 1 DLPLDWVSGG 10
D PL VSGG
Sbjct: 43 DRPLHAVSGG 52


>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 1 DLPLDWVSGG 10
++PL ++SGG
Sbjct: 784 EVPLTFLSGG 793


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 3 PLDWVSGG 10
P D++SGG
Sbjct: 44 PKDFISGG 51


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 DLPLDW 6
DLP DW
Sbjct: 729 DLPDDW 734


>sp|RS15_METBU|SMALL ribosomal subunit protein uS15|Methanococcoides burtonii (strain

Query: 2 LPLDW 6
LP+DW
Sbjct: 135 LPIDW 139


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 3 PLDWVSGG 10
PL+ VSGG
Sbjct: 823 PLEAVSGG 830


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 1 DLPLDWVS 8
+LP DW +
Sbjct: 521 NLPFDWTN 528


>sp|RS15_METHJ|SMALL ribosomal subunit protein uS15|Methanospirillum hungatei JF-1

Query: 2 LPLDWV 7
LP DWV
Sbjct: 135 LPKDWV 140


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LDWVSG 9
LDW+SG
Sbjct: 308 LDWLSG 313


>sp|GVPN2_HALSA|GAS vesicle ATPase GvpN2|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLPLDWVSG 9
D P+ WV+G
Sbjct: 107 DRPVVWVNG 115


>sp|FLUC_THEON|FLUORIDE-SPECIFIC ion channel FluC|Thermococcus onnurineus (strain NA1)

Query: 1 DLPLDW 6
D+P DW
Sbjct: 60 DVPADW 65


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DLPLDWVSGG 10
D+PL V GG
Sbjct: 330 DVPLATVGGG 339


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 LDWVSGG 10
L WVSGG
Sbjct: 452 LRWVSGG 458


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPLDWVS 8
+PL WVS
Sbjct: 75 VPLHWVS 81


>sp|GVPN_HALMT|GAS vesicle ATPase GvpN|Haloferax mediterranei (strain ATCC 33500

Query: 1 DLPLDWVSG 9
D P+ W++G
Sbjct: 109 DRPVVWING 117


>sp|GVPN1_HALSA|GAS vesicle ATPase GvpN1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLPLDWVSG 9
D P+ W++G
Sbjct: 109 DRPVVWING 117


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 DWVSGG 10
DW SGG
Sbjct: 140 DWTSGG 145


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DLPLDWVSGG 10
D+P+ +++GG
Sbjct: 348 DIPIGFLTGG 357


>sp|OGT_METBF|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DLPLDWV 7
++P DW+
Sbjct: 35 EIPADWI 41


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PLDWVSGG 10
P +W+ GG
Sbjct: 223 PREWIEGG 230


>sp|KAD6_METS5|PUTATIVE adenylate kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DLPLDWV 7
D P+DW+
Sbjct: 158 DKPVDWL 164


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 DLPLDWVSGG 10
D+P ++SGG
Sbjct: 134 DIPAIFISGG 143


>sp|VHCD_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Archaeoglobus profundus (strain

Query: 4 LDWVSG 9
L+W+SG
Sbjct: 105 LEWISG 110


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLPLDWVSGG 10
D+P+ +++GG
Sbjct: 348 DIPIAFLTGG 357




143|SequenceR|720|711|GPTTTDLPLD

>sp|TRMY_HALSA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halobacterium

Query: 1 GPTTTDLPLD 10
PTT D PLD
Sbjct: 11 APTTPDFPLD 20


>sp|TRMY_HALS3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halobacterium

Query: 1 GPTTTDLPLD 10
PTT D PLD
Sbjct: 11 APTTPDFPLD 20


>sp|PPAC_METJA|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanocaldococcus jannaschii (strain

Query: 2 PTTTDL 7
PTTTDL
Sbjct: 154 PTTTDL 159


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 5 TDLPLD 10
TD+PLD
Sbjct: 367 TDMPLD 372


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 1 GPTTTDLPLD 10
GP DLP D
Sbjct: 151 GPVHIDLPKD 160


>sp|METK_CALMQ|S-ADENOSYLMETHIONINE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 PTTTDLPLD 10
P T DLP++
Sbjct: 13 PPTEDLPVE 21


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GPTTTDLPLD 10
GP LPLD
Sbjct: 91 GPLNNFLPLD 100


>sp|CHEF2_HALS3|TAXIS protein CheF2|Halobacterium salinarum (strain ATCC 29341

Query: 1 GPTTTDLPL 9
GP TT+L L
Sbjct: 181 GPITTELAL 189


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 GPTTTDLPLD 10
GP DLP D
Sbjct: 151 GPVHIDLPKD 160


>sp|PURA_PYRAB|ADENYLOSUCCINATE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 GPTTTDLPLD 10
GP T++P++
Sbjct: 231 GPFPTEMPME 240




144|SequenceR|725|716|QELAPGPTTT

>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 QELAPGP 7
ELAPGP
Sbjct: 805 HELAPGP 811


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 2 ELAPGPTT 9
ELA GPTT
Sbjct: 316 ELANGPTT 323


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 1 QELAPGPTT 9
+ LAPGP T
Sbjct: 495 ESLAPGPLT 503


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ELAPGPTTT 10
E A GPTTT
Sbjct: 313 EGANGPTTT 321




145|SequenceR|730|721|ELQQLQELAP

>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LQQLQELAP 10
L++L+ELAP
Sbjct: 156 LKRLEELAP 164


>sp|PYRF_HALMA|OROTIDINE 5'-phosphate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 1 ELQQLQELAP 10
EL++++EL P
Sbjct: 194 ELEEIRELVP 203


>sp|PURA_METMA|ADENYLOSUCCINATE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LQQLQELAP 10
L +L+ELAP
Sbjct: 156 LARLEELAP 164


>sp|PURA_METBF|ADENYLOSUCCINATE synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LQQLQELAP 10
L +L+ELAP
Sbjct: 156 LARLEELAP 164




146|SequenceR|735|726|AAKAKELQQL

>sp|PYRH_IGNH4|URIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 KAKELQQL 10
KA+ELQ+L
Sbjct: 157 KARELQRL 164




147|SequenceR|740|731|EQELKAAKAK

>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 EQELKAAKAK 10
E+ELKAA K
Sbjct: 546 EEELKAAVEK 555


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 EQELKAAKAK 10
E+ELK KAK
Sbjct: 512 EEELKERKAK 521




148|SequenceR|745|736|EAERREQELK

>sp|DADD_METJA|5'-DEOXYADENOSINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EAERREQELK 10
+ ERRE+ELK
Sbjct: 143 DEERRERELK 152


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EAERREQELK 10
+ E+RE+ELK
Sbjct: 145 DEEKREKELK 154


>sp|DADD_META3|5'-DEOXYADENOSINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EAERREQELK 10
+ E+RE ELK
Sbjct: 147 DEEKRENELK 156


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 1 EAERREQELK 10
+ E+RE+ELK
Sbjct: 145 DEEKREKELK 154


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 1 EAERREQELK 10
+ E+RE+ELK
Sbjct: 145 DEEKREKELK 154


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 1 EAERREQELK 10
+ E+RE+ELK
Sbjct: 145 DEEKREKELK 154


>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 3 ERREQELK 10
E+RE+ELK
Sbjct: 147 EKREKELK 154


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 EAERREQELK 10
+AE+RE+E +
Sbjct: 160 DAEKRERECR 169


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EAERREQEL 9
+AE REQ L
Sbjct: 39 QAENREQNL 47


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus

Query: 2 AERREQELK 10
AER E+ELK
Sbjct: 26 AERLEKELK 34




149|SequenceR|750|741|RKARMEAERR

>sp|FEN_SACS2|FLAP endonuclease 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RKARMEAERR 10
RKA+ EAER+
Sbjct: 95 RKAKEEAERK 104


>sp|RISB_META3|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 ARMEAERR 10
RM+AERR
Sbjct: 108 TRMQAERR 115




150|SequenceR|755|746|REEEERKARM

***** No hits found ******


151|SequenceR|760|751|EEQRKREEEE

>sp|MCR_SULTO|MALONYL-COA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EEQRKREE 8
+EQRKR E
Sbjct: 135 DEQRKRRE 142




152|SequenceR|765|756|QQRRLEEQRK

>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RRLEEQRK 10
RRLEE+++
Sbjct: 87 RRLEEEKR 94


>sp|TDXH_PYRAB|PEROXIREDOXIN abyssi (strain GE5 /

Query: 2 QRRLEEQRK 10
Q+RLEE RK
Sbjct: 54 QKRLEEFRK 62


>sp|Y1892_SACI2|DNA-BINDING protein LS215_1892|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 QQRRLEEQRK 10
+Q+RLEE+RK
Sbjct: 23 EQKRLEEERK 32


>sp|Y1868_SACI7|DNA-BINDING protein YG5714_1868|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 QQRRLEEQRK 10
+Q+RLEE+RK
Sbjct: 23 EQKRLEEERK 32


>sp|Y1057_SACI1|DNA-BINDING protein YN1551_1057|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 QQRRLEEQRK 10
+Q+RLEE+RK
Sbjct: 23 EQKRLEEERK 32


>sp|Y1870_SACI3|DNA-BINDING protein M1627_1870|Saccharolobus islandicus (strain M.16.27)

Query: 1 QQRRLEEQRK 10
+Q+RLEE+RK
Sbjct: 23 EQKRLEEERK 32


>sp|Y1799_SACI6|DNA-BINDING protein M164_1799|Saccharolobus islandicus (strain M.16.4 /

Query: 1 QQRRLEEQRK 10
+Q+RLEE+RK
Sbjct: 23 EQKRLEEERK 32


>sp|Y1752_SACI4|DNA-BINDING protein M1425_1752|Saccharolobus islandicus (strain M.14.25 /

Query: 1 QQRRLEEQRK 10
+Q+RLEE+RK
Sbjct: 23 EQKRLEEERK 32


>sp|HTR8_HALS3|TRANSDUCER protein Htr8|Halobacterium salinarum (strain ATCC 29341

Query: 2 QRRLEEQRK 10
Q+RLEE R+
Sbjct: 217 QKRLEEARQ 225


>sp|TDXH_PYRHO|PEROXIREDOXIN horikoshii (strain ATCC 700860

Query: 2 QRRLEEQRK 10
Q+R+EE RK
Sbjct: 54 QKRVEEFRK 62


>sp|Y352_SACS2|DNA-BINDING protein SSO0352|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QQRRLEEQRK 10
+Q+R+EE+RK
Sbjct: 23 EQKRIEEERK 32




153|SequenceR|770|761|RLIEEQQRRL

>sp|NPD2_PYRAE|NAD-DEPENDENT protein deacylase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RLIEEQQRRL 10
RL+EE +RRL
Sbjct: 232 RLVEEVKRRL 241


>sp|DPHB_METLZ|DIPHTHINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LIEEQQRRL 10
L+EEQ RR+
Sbjct: 183 LLEEQARRV 191


>sp|RL32_THEAC|LARGE ribosomal subunit protein eL32|Thermoplasma acidophilum (strain

Query: 1 RLIEEQQRRL 10
RL++E QRRL
Sbjct: 3 RLLDENQRRL 12


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LIEEQQRR 9
LIE QQRR
Sbjct: 127 LIEVQQRR 134


>sp|PNPH_KORCO|PROBABLE 6-oxopurine nucleoside phosphorylase|Korarchaeum cryptofilum

Query: 1 RLIEEQQRRL 10
RLIEE RR+
Sbjct: 244 RLIEETIRRI 253


>sp|SYW_HYPBU|TRYPTOPHAN--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 RLIEEQQRRL 10
+ +EE QRRL
Sbjct: 348 KFLEEHQRRL 357


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RLIEEQQRR 9
R+IEE+ RR
Sbjct: 371 RIIEEKWRR 379


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RLIEEQQRRL 10
R EE+QRRL
Sbjct: 345 RDTEEEQRRL 354


>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 2 LIEEQQRRL 10
L EEQ+RRL
Sbjct: 87 LTEEQRRRL 95


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RLIEEQQRR 9
R++EE QRR
Sbjct: 319 RIVEELQRR 327


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 RLIEEQQRRL 10
R+ EE+ RRL
Sbjct: 361 RITEEENRRL 370


>sp|CDC6A_HALMA|ORC1-TYPE DNA replication protein 1|Haloarcula marismortui (strain ATCC

Query: 1 RLIEEQQR 8
RLIE+QQ
Sbjct: 74 RLIEDQQN 81




154|SequenceR|775|766|EEQQRRLIEE

>sp|PANB_PYRAR|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EEQQRRLIEE 10
EEQ+++L+E+
Sbjct: 157 EEQKKKLVED 166


>sp|PANB_PYRAE|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EEQQRRLIEE 10
EEQ+R+L+++
Sbjct: 156 EEQRRKLLDD 165


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EEQQRRLIEE 10
EEQQR+++EE
Sbjct: 298 EEQQRKVLEE 307


>sp|Y094_METJA|UNCHARACTERIZED protein MJ0094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EQQRRLIEE 10
E++RRLIEE
Sbjct: 125 EKERRLIEE 133


>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 1 EEQQRRLIE 9
EEQ+RRL+E
Sbjct: 89 EEQRRRLLE 97


>sp|DAPA_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 EQQRRLIE 9
E+QRR+I+
Sbjct: 55 EEQRRMID 62


>sp|Y303_PYRFU|UPF0284 protein PF0303|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EEQQRRLIEE 10
+E +RR+IEE
Sbjct: 169 QELKRRVIEE 178


>sp|AROC_AERPE|CHORISMATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EQQRRLIEE 10
E+ RRL+EE
Sbjct: 193 ERMRRLVEE 201


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EQQRRLIEE 10
E+QRRL+EE
Sbjct: 62 EEQRRLLEE 70


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 EQQRRLIEE 10
++QRR++EE
Sbjct: 64 DEQRRILEE 72


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EEQQRRLIEE 10
EE Q+R IEE
Sbjct: 382 EEMQKRAIEE 391


>sp|Y1005_METKA|PUTATIVE HTH-type transcriptional regulatory protein|Methanopyrus kandleri

Query: 1 EEQQRRLIEE 10
EE+ RRL+EE
Sbjct: 281 EERVRRLVEE 290


>sp|PIP_SACS2|PROLINE iminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EQQRRLIEE 10
++ RRLIEE
Sbjct: 150 KEMRRLIEE 158


>sp|RIBL_ARCFU|FAD synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEQQRRLIE 9
EEQ+RR++E
Sbjct: 47 EEQRRRVVE 55


>sp|RIBL_FERPA|FAD synthase|Ferroglobus placidus (strain DSM 10642

Query: 1 EEQQRRLIE 9
EEQ+RR++E
Sbjct: 51 EEQRRRVVE 59


>sp|DNAG_PYRNV|DNA primase DnaG|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EEQQRRLIEE 10
EE++RR+IE+
Sbjct: 113 EEKRRRIIEK 122


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 EQQRRLIEE 10
E+Q+RL+EE
Sbjct: 51 EEQKRLLEE 59


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EEQQRRLIEE 10
EE+ RR +EE
Sbjct: 374 EEKWRRYVEE 383




155|SequenceR|780|771|RRKREEEQQR

>sp|Y480_METJA|UNCHARACTERIZED protein MJ0480|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KREEEQQR 10
K +EEQQR
Sbjct: 80 KLQEEQQR 87




156|SequenceR|785|776|LEEEERRKRE

>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LEEEERRKRE 10
LE+EE+R++E
Sbjct: 146 LEDEEKRRKE 155


>sp|DADD_METJA|5'-DEOXYADENOSINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEEEERRKRE 10
L +EERR+RE
Sbjct: 141 LFDEERRERE 150


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EEEERRKRE 10
EEEE+R RE
Sbjct: 19 EEEEKRIRE 27




157|SequenceR|790|781|QKRRALEEEE

>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 2 KRRALEEE 9
K RALEEE
Sbjct: 57 KTRALEEE 64


>sp|SRP54_HALLT|SIGNAL recognition particle 54 kDa|Halorubrum lacusprofundi (strain ATCC

Query: 2 KRRALEEE 9
K RALEEE
Sbjct: 57 KTRALEEE 64


>sp|Y1374_SULTO|DNA-BINDING protein STK_13740|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QKRRALEEEE 10
Q+R+ALEE++
Sbjct: 20 QQRKALEEQQ 29




158|SequenceR|795|786|RLAEEQKRRA

>sp|RPIA_HALWD|RIBOSE-5-PHOSPHATE isomerase A|Haloquadratum walsbyi (strain DSM 16790

Query: 3 AEEQKRRA 10
+EEQKRRA
Sbjct: 7 SEEQKRRA 14


>sp|RFRNP_IGNH4|RNA-FREE ribonuclease P|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RLAEEQKRRA 10
R+AEE RRA
Sbjct: 111 RVAEESTRRA 120


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 RLAEEQKRRA 10
R+AEE KRR
Sbjct: 262 RIAEELKRRG 271


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 3 AEEQKRRA 10
A+E+KRRA
Sbjct: 242 AQERKRRA 249


>sp|RFRNP_HYPBU|RNA-FREE ribonuclease P|Hyperthermus butylicus (strain DSM 5456

Query: 1 RLAEEQKRRA 10
R+AEE RRA
Sbjct: 120 RVAEEHVRRA 129


>sp|Y1892_SACI2|DNA-BINDING protein LS215_1892|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RLAEEQKRRA 10
RL EE+KR+A
Sbjct: 26 RLEEERKRKA 35


>sp|Y1868_SACI7|DNA-BINDING protein YG5714_1868|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RLAEEQKRRA 10
RL EE+KR+A
Sbjct: 26 RLEEERKRKA 35


>sp|Y1057_SACI1|DNA-BINDING protein YN1551_1057|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RLAEEQKRRA 10
RL EE+KR+A
Sbjct: 26 RLEEERKRKA 35


>sp|Y1870_SACI3|DNA-BINDING protein M1627_1870|Saccharolobus islandicus (strain M.16.27)

Query: 1 RLAEEQKRRA 10
RL EE+KR+A
Sbjct: 26 RLEEERKRKA 35


>sp|Y1799_SACI6|DNA-BINDING protein M164_1799|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RLAEEQKRRA 10
RL EE+KR+A
Sbjct: 26 RLEEERKRKA 35


>sp|Y1752_SACI4|DNA-BINDING protein M1425_1752|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RLAEEQKRRA 10
RL EE+KR+A
Sbjct: 26 RLEEERKRKA 35




159|SequenceR|800|791|QERQRRLAEE

>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 ERQRRLAEE 10
E+ +RLAEE
Sbjct: 148 EKAKRLAEE 156


>sp|G1PDH_METJA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QERQRRLAEE 10
+E R+LAEE
Sbjct: 322 REEARKLAEE 331


>sp|MSRA_SACS2|PEPTIDE methionine sulfoxide reductase MsrA|Saccharolobus solfataricus

Query: 2 ERQRRLAEE 10
E QR++AEE
Sbjct: 102 EEQRKIAEE 110


>sp|SYTE_AERPE|THREONINE--TRNA ligase editing subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 ERQRRLAEE 10
E RRLAEE
Sbjct: 177 EVHRRLAEE 185


>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 ERQRRLAEE 10
ER+ RLAEE
Sbjct: 466 ERKERLAEE 474


>sp|RFRNP_ARCFU|RNA-FREE ribonuclease P|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RQRRLAEE 10
R RRLAEE
Sbjct: 110 RGRRLAEE 117


>sp|Y1005_METKA|PUTATIVE HTH-type transcriptional regulatory protein|Methanopyrus kandleri

Query: 1 QERQRRLAEE 10
+ER RRL EE
Sbjct: 281 EERVRRLVEE 290


>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ERQRRLAEE 10
ER RLAEE
Sbjct: 211 ERAERLAEE 219




160|SequenceR|805|796|RLAIEQERQR

>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 RLAIEQER 8
RLA+++ER
Sbjct: 852 RLAVDEER 859




161|SequenceR|810|801|EERQRRLAIE

>sp|ARGDC_PYRCJ|ARGININE decarboxylase proenzyme|Pyrobaculum calidifontis (strain DSM

Query: 1 EERQRRLAIE 10
EER RR+ IE
Sbjct: 31 EERLRRIVIE 40


>sp|ARGDC_PYRIL|ARGININE decarboxylase proenzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EERQRRLAIE 10
EE+ RR+ IE
Sbjct: 31 EEKLRRIVIE 40


>sp|RL30E_METKA|LARGE ribosomal subunit protein eL30|Methanopyrus kandleri (strain AV19

Query: 2 ERQRRLAIE 10
ERQ R+A+E
Sbjct: 5 ERQIRMAVE 13




162|SequenceR|815|806|QQREEEERQR

***** No hits found ******


163|SequenceR|820|811|LAEEQQQREE

>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 LAEEQQQRE 9
LAE++QQ E
Sbjct: 670 LAEDEQQAE 678


>sp|TDXH_PYRHO|PEROXIREDOXIN horikoshii (strain ATCC 700860

Query: 3 EEQQQREE 10
EE++QREE
Sbjct: 189 EEKKQREE 196


>sp|TDXH_PYRAB|PEROXIREDOXIN abyssi (strain GE5 /

Query: 3 EEQQQREE 10
EE++QREE
Sbjct: 189 EEKKQREE 196




164|SequenceR|825|816|EELRRLAEEQ

>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EELRRLAEE 9
EELR+L EE
Sbjct: 224 EELRKLTEE 232


>sp|IORB_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus horikoshii (strain ATCC

Query: 1 EELRRLAEEQ 10
EE++R+ EE+
Sbjct: 116 EEIKRIVEEE 125


>sp|PURQ_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EELRRLAEE 9
EE+R LAEE
Sbjct: 69 EEIRELAEE 77


>sp|HTPX_THEKO|PROTEASE HtpX homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EELRRLAEE 9
E LR++AEE
Sbjct: 277 ERLRKIAEE 285


>sp|G1PDH_METJA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EELRRLAEE 9
EE R+LAEE
Sbjct: 323 EEARKLAEE 331


>sp|PURQ_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EELRRLAEE 9
EE+R LAEE
Sbjct: 69 EEIRELAEE 77


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EELRRLAEE 9
E LR++AEE
Sbjct: 276 ERLRKIAEE 284


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EELRRLAEE 9
+ELRR+A+E
Sbjct: 219 KELRRIADE 227


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 1 EELRRLAEE 9
EEL +LAEE
Sbjct: 106 EELGQLAEE 114


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 1 EELRRLAEEQ 10
+E+RRLA E
Sbjct: 192 KEVRRLANEH 201


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 1 EELRRLAEE 9
E+L+RLAEE
Sbjct: 141 EQLKRLAEE 149


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EELRRLAEE 9
E+ +RLAEE
Sbjct: 148 EKAKRLAEE 156


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 EELRRLAE 8
EEL RLAE
Sbjct: 221 EELLRLAE 228


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EELRRLAEEQ 10
+ELRR+A E
Sbjct: 221 QELRRIASEH 230


>sp|IDI2_METJA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EELRRLAEE 9
EE++RLAE+
Sbjct: 242 EEIKRLAEK 250


>sp|LEUC1_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 3 LRRLAEEQ 10
LR+ AEEQ
Sbjct: 83 LRKFAEEQ 90


>sp|PURT_IGNH4|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Ignicoccus hospitalis

Query: 2 ELRRLAEEQ 10
ELRRLA E+
Sbjct: 117 ELRRLAAEK 125


>sp|ISF1_ARCFU|IRON-SULFUR flavoprotein AF_1436|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EELRRLAEE 9
+EL+RL EE
Sbjct: 66 DELKRLVEE 74


>sp|SRP54_METKA|SIGNAL recognition particle 54 kDa|Methanopyrus kandleri (strain AV19 /

Query: 1 EELRRLAEE 9
E+LR+LAEE
Sbjct: 146 EQLRQLAEE 154


>sp|NFI_ARCFU|ENDONUCLEASE V|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EELRRLAEEQ 10
EELRR+ EE
Sbjct: 7 EELRRIQEEM 16


>sp|MTXA_METMA|PUTATIVE methyltransferase Mtx subunit A|Methanosarcina mazei (strain ATCC

Query: 1 EELRRLAEE 9
EE+RR+ E+
Sbjct: 110 EEIRRIVED 118


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus

Query: 1 EELRRLAEE 9
+E RR+AEE
Sbjct: 79 DEARRVAEE 87


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EELRRLAEEQ 10
EELR +AEE+
Sbjct: 29 EELRTIAEER 38


>sp|CDC61_AERPE|ORC1-TYPE DNA replication protein 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 ELRRLAE 8
ELRRLAE
Sbjct: 35 ELRRLAE 41


>sp|GGR_HALVD|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Haloferax volcanii (strain ATCC 29605

Query: 1 EELRRLAEEQ 10
E+L RL +EQ
Sbjct: 367 EDLHRLPDEQ 376


>sp|AATE_THEPD|A-TYPE ATP synthase subunit E|Thermofilum pendens (strain DSM 2475

Query: 1 EELRRLAEEQ 10
+ELRR AEE+
Sbjct: 16 QELRRAAEEE 25


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 EELRRLAEE 9
+E+RRLA+E
Sbjct: 196 KEVRRLADE 204


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EELRRLAEEQ 10
EEL ++AEE+
Sbjct: 263 EELIKIAEEE 272


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 EELRRLAE 8
EE+RRL E
Sbjct: 87 EEVRRLGE 94




165|SequenceR|830|821|EERRREELRR

>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 ERRREELRR 10
+RR EELRR
Sbjct: 681 KRRVEELRR 689


>sp|DADD_METJA|5'-DEOXYADENOSINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EERRREELR 9
EERR EL+
Sbjct: 144 EERRERELK 152


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EERRREELR 9
EE+RR+E++
Sbjct: 149 EEKRRKEIK 157


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 EERRREELRR 10
EE R+EEL+R
Sbjct: 487 EEVRKEELKR 496




166|SequenceR|835|826|KRREEEERRR

>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 4 EEEERRR 10
EEE RRR
Sbjct: 426 EEESRRR 432


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 KRREEEERRR 10
KR+EEE R+R
Sbjct: 458 KRKEEEARKR 467




167|SequenceR|840|831|LLEEQKRREE

>sp|RPIA_HALWD|RIBOSE-5-PHOSPHATE isomerase A|Haloquadratum walsbyi (strain DSM 16790

Query: 3 EEQKRR 8
EEQKRR
Sbjct: 8 EEQKRR 13


>sp|TDXH_PYRHO|PEROXIREDOXIN horikoshii (strain ATCC 700860

Query: 2 LEEQKRREE 10
+EE+K+REE
Sbjct: 188 IEEKKQREE 196


>sp|TDXH_NANEQ|PEROXIREDOXIN equitans (strain Kin4-M)

Query: 2 LEEQKRREE 10
LEE+K REE
Sbjct: 194 LEEKKDREE 202


>sp|TDXH_PYRAB|PEROXIREDOXIN abyssi (strain GE5 /

Query: 2 LEEQKRREE 10
+EE+K+REE
Sbjct: 188 VEEKKQREE 196




168|SequenceR|845|836|EEQKRLLEEQ

>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EEQKRLLEEQ 10
EEQ+RLLEE+
Sbjct: 62 EEQRRLLEEK 71


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EEQKRLLEEQ 10
EEQKRLLEE+
Sbjct: 51 EEQKRLLEEK 60


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EQKRLLEEQ 10
EQKRLL EQ
Sbjct: 66 EQKRLLSEQ 74


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 EEQKRLLEEQ 10
+EQ+R+LEE+
Sbjct: 64 DEQRRILEEK 73


>sp|IORB_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus horikoshii (strain ATCC

Query: 1 EEQKRLLEEQ 10
EE KR++EE+
Sbjct: 116 EEIKRIVEEE 125


>sp|TPIS_ARCFU|TRIOSEPHOSPHATE isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEQKRLLEE 9
E+QKR LEE
Sbjct: 210 EDQKRALEE 218


>sp|LEU1_SULAC|2-ISOPROPYLMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 KRLLEEQ 10
KRLLEEQ
Sbjct: 335 KRLLEEQ 341


>sp|RPO1C_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrobaculum aerophilum (strain ATCC

Query: 1 EEQKRLLEEQ 10
+E KR+LEEQ
Sbjct: 282 QEIKRVLEEQ 291


>sp|HEM1_AERPE|GLUTAMYL-TRNA reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EEQKRLLEEQ 10
EE KR++EE+
Sbjct: 288 EEAKRMMEER 297


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EEQKRLLEEQ 10
EEQ+R+L E+
Sbjct: 62 EEQRRILRER 71


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EEQKRLLEEQ 10
EE KRL+EE+
Sbjct: 986 EEFKRLIEEE 995




169|SequenceR|850|841|WKAAEEEQKR

>sp|PSTC_METJA|PROBABLE phosphate transport system permease|Methanocaldococcus jannaschii

Query: 1 WKAAEEEQK 9
WKAAEE K
Sbjct: 59 WKAAEEPAK 67


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 WKAAEEEQKR 10
WK EE++K+
Sbjct: 49 WKHIEEKRKK 58


>sp|HERA_SULAC|DNA double-strand break repair helicase|Sulfolobus acidocaldarius

Query: 1 WKAAEEEQ 8
WK A+EE+
Sbjct: 478 WKRAKEEE 485




170|SequenceR|855|846|EEERAWKAAE

>sp|Y1305_METJA|PUTATIVE protein adenylyltransferase MJ1305|Methanocaldococcus jannaschii

Query: 1 EEERAWKAAE 10
+EE+ WK A+
Sbjct: 136 DEEKEWKIAD 145


>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 EERAWKAAE 10
+ER+WKA E
Sbjct: 280 DERSWKAVE 288


>sp|Y1063_METJA|UNCHARACTERIZED protein MJ1063|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ERAWKAAE 10
E+AWK A+
Sbjct: 144 EKAWKNAK 151


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 2 EERAWKAAE 10
EE+ WK E
Sbjct: 756 EEKGWKPLE 764


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEERAWKAA 9
+E+RAW A
Sbjct: 367 DEKRAWNKA 375




171|SequenceR|860|851|RRQAEEEERA

***** No hits found ******


172|SequenceR|865|856|RNEELRRQAE

>sp|RS4E_PYRIL|SMALL ribosomal subunit protein eS4|Pyrobaculum islandicum (strain DSM

Query: 1 RNEELRR 7
RNEE+RR
Sbjct: 212 RNEEVRR 218


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 2 NEELRRQAE 10
+EELRR+ E
Sbjct: 415 DEELRRKVE 423


>sp|PFDA_METAC|PREFOLDIN subunit alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RNEELRRQAE 10
R++EL+RQAE
Sbjct: 14 RHQELQRQAE 23


>sp|Y2133_ARCFU|UNCHARACTERIZED protein AF_2133|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EELRRQAE 10
EELRRQ +
Sbjct: 32 EELRRQKD 39


>sp|HERA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 2 NEELRRQAE 10
NEE+RR A+
Sbjct: 344 NEEIRRVAQ 352


>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RNEELRRQAE 10
RN+ LR +AE
Sbjct: 60 RNDRLREEAE 69


>sp|Y210_METM6|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 2 NEELRRQA 9
NEE+RR+A
Sbjct: 262 NEEIRRKA 269


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RNEELRRQA 9
++EELRR+A
Sbjct: 69 KDEELRRKA 77


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 ELRRQAE 10
ELRR+AE
Sbjct: 371 ELRREAE 377




173|SequenceR|870|861|EEMRLRNEEL

>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEMRLRNE 8
EEMR RNE
Sbjct: 228 EEMRARNE 235


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EEMRLRNEEL 10
EE+R NEEL
Sbjct: 1057 EELRNWNEEL 1066


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 RLRNEEL 10
R+RNEE+
Sbjct: 24 RIRNEEI 30


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 RLRNEEL 10
R+RNEE+
Sbjct: 24 RIRNEEI 30


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 RLRNEEL 10
R+RNEE+
Sbjct: 24 RIRNEEI 30




174|SequenceR|875|866|LRAAEEEMRL

>sp|GATE_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanospirillum hungatei JF-1 (strain

Query: 2 RAAEEEM 8
RAAEEEM
Sbjct: 60 RAAEEEM 66




175|SequenceR|880|871|EEEHRLRAAE

>sp|Y2102_ARCFU|UNCHARACTERIZED protein AF_2102|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEEHRLR 7
EEE+RLR
Sbjct: 28 EEEYRLR 34


>sp|Y703_ARCFU|UNCHARACTERIZED protein AF_0703|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EEHRLRAAE 10
E HR+R A+
Sbjct: 70 EPHRIRGAD 78




176|SequenceR|885|876|KRKREEEEHR

>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RKREEEEHR 10
R+R E EHR
Sbjct: 53 RERIETEHR 61


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RKREEEEH 9
RK+EEE+H
Sbjct: 589 RKKEEEQH 596




177|SequenceR|890|881|QVELEKRKRE

>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 ELEKRKRE 10
ELE+R+R+
Sbjct: 521 ELERRRRQ 528


>sp|AROC_METAR|CHORISMATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QVELEKRK 8
Q EL+KRK
Sbjct: 42 QAELDKRK 49


>sp|HFLX_THEPD|GTPASE HflX|Thermofilum pendens (strain DSM 2475

Query: 1 QVELEKRKRE 10
Q+EL K KRE
Sbjct: 120 QIELAKLKRE 129


>sp|KTHY_THEGJ|PROBABLE thymidylate kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VELEKRKRE 10
VEL+KR RE
Sbjct: 160 VELQKRVRE 168


>sp|RAD50_SULAC|DNA double-strand break repair Rad50|Sulfolobus acidocaldarius (strain

Query: 1 QVELEKRKRE 10
Q+EL+KR +E
Sbjct: 492 QLELQKRSKE 501




178|SequenceR|895|886|LEKQRQVELE

>sp|KADA_SULTO|ADENYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LEKQRQVELE 10
+EKQ+Q+++E
Sbjct: 62 VEKQKQLQIE 71




179|SequenceR|900|891|QRQRMLEKQR

>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QRQRMLEKQR 10
++QR LEK+R
Sbjct: 658 KKQRSLEKRR 667


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 QRMLEKQR 10
QR++EK+R
Sbjct: 95 QRVIEKER 102


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QRQRMLEKQR 10
++Q++LEK+R
Sbjct: 397 EKQKLLEKKR 406


>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 1 QRQRMLEKQR 10
QR+R+LE +R
Sbjct: 91 QRRRLLEAKR 100




180|SequenceR|905|896|AEQQQQRQRM

***** No hits found ******


181|SequenceR|910|901|QLRRLAEQQQ

***** No hits found ******


182|SequenceR|915|906|QQQQQQLRRL

***** No hits found ******


183|SequenceR|920|911|QALQQQQQQQ

***** No hits found ******


184|SequenceR|925|916|SPLKMQALQQ

>sp|GLPK_HALWD|GLYCEROL kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PLKMQA 7
PLKMQA
Sbjct: 150 PLKMQA 155




185|SequenceR|930|921|GWTSSSPLKM

>sp|KORB_METTH|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter thermautotrophicus

Query: 2 WTSSSPLKM 10
WT++ PL++
Sbjct: 175 WTTAHPLQL 183


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GWTSSSP 7
GW SS+P
Sbjct: 47 GWPSSNP 53


>sp|KORB_METTM|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter marburgensis (strain ATCC

Query: 2 WTSSSPLKM 10
WT++ PL++
Sbjct: 175 WTAAHPLQL 183


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 WTSSSPLKM 10
W SSSP K+
Sbjct: 924 WLSSSPNKI 932


>sp|PXPA_THEON|5-OXOPROLINASE subunit A|Thermococcus onnurineus (strain NA1)

Query: 1 GWTSSSPLKM 10
GW + PL M
Sbjct: 36 GWHAGDPLVM 45


>sp|PXPA_THEKO|5-OXOPROLINASE subunit A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GWTSSSPLKM 10
GW + PL M
Sbjct: 36 GWHAGDPLVM 45


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GWTSSSPLKM 10
GW + PL M
Sbjct: 36 GWHAGDPLVM 45


>sp|PXPA_PYRFU|5-OXOPROLINASE subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GWTSSSPLKM 10
GW + PL M
Sbjct: 36 GWHAGDPLVM 45


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GWTSSSPLK 9
WT S+P K
Sbjct: 456 AWTESNPYK 464


>sp|PDAD1_METAC|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Methanosarcina acetivorans (strain ATCC

Query: 2 WTSSSPLK 9
WT+ +PLK
Sbjct: 131 WTNEAPLK 138


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 2 WTSSSPLKM 10
W SSSP ++
Sbjct: 924 WLSSSPNRL 932


>sp|PDAD1_METMA|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WTSSSPLK 9
WT PLK
Sbjct: 131 WTKEEPLK 138




186|SequenceR|935|926|TNSQQGWTSS

>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 1 TNSQQGWTSS 10
T SQ+GW S+
Sbjct: 84 TMSQKGWRSA 93


>sp|BGAL_PYRWO|BETA-GALACTOSIDASE woesei

Query: 1 TNSQQGWTS 9
TN + GW +
Sbjct: 172 TNKRNGWVN 180




187|SequenceR|940|931|SQCATTNSQQ

***** No hits found ******


188|SequenceR|945|936|SLTAQSQCAT

***** No hits found ******


189|SequenceR|950|941|QIEALSLTAQ

***** No hits found ******


190|SequenceR|955|946|EEELKQIEAL

>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEELKQIE 8
EEELK+IE
Sbjct: 174 EEELKEIE 181


>sp|RL37A_PYRNV|LARGE ribosomal subunit protein eL43|Pyrobaculum neutrophilum (strain

Query: 2 EELKQIEA 9
EELK++EA
Sbjct: 84 EELKEVEA 91


>sp|RL37A_PYRAE|LARGE ribosomal subunit protein eL43|Pyrobaculum aerophilum (strain

Query: 2 EELKQIEA 9
EELK++EA
Sbjct: 84 EELKEVEA 91


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EELKQIEAL 10
EELKQIE L
Sbjct: 654 EELKQIELL 662


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EEELKQIEAL 10
EEELK+IE L
Sbjct: 655 EEELKEIEML 664


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EEELKQIEA 9
EEELKQ +A
Sbjct: 515 EEELKQRKA 523


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEELKQIEAL 10
EEE+K+IE L
Sbjct: 642 EEEIKEIEML 651


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EELKQIEAL 10
+ELKQIE L
Sbjct: 654 DELKQIELL 662


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 EEELKQIEAL 10
E+E K+IEAL
Sbjct: 179 EDERKEIEAL 188


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 EELKQIEA 9
E+L+QIEA
Sbjct: 37 EQLRQIEA 44


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 EELKQIEAL 10
EELKQ+E +
Sbjct: 651 EELKQMETI 659




191|SequenceR|960|951|LQREREEELK

>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter thermautotrophicus

Query: 1 LQREREEELK 10
L+ EREEE++
Sbjct: 383 LRVEREEEIQ 392


>sp|HISX_SACS2|HISTIDINOL dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 REREEELK 10
+ REEELK
Sbjct: 52 KAREEELK 59




192|SequenceR|965|956|RQEERLQRER

>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QEERLQRER 10
QEE+L RER
Sbjct: 4 QEEKLIRER 12


>sp|PFDB_METAR|PREFOLDIN subunit beta|Methanocella arvoryzae (strain DSM 22066

Query: 1 RQEERLQ 7
RQEERLQ
Sbjct: 91 RQEERLQ 97




193|SequenceR|970|961|ERQQRRQEER

***** No hits found ******


194|SequenceR|975|966|LAKMLERQQR

>sp|GGGPS_AERPE|GERANYLGERANYLGLYCERYL phosphate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LAKMLERQQR 10
L K+LER+ R
Sbjct: 9 LEKLLERRSR 18


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 1 LAKMLERQQR 10
++KML+RQ R
Sbjct: 418 MSKMLKRQMR 427


>sp|NADC_ARCFU|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 2 AKMLERQQR 10
AKM+ER +R
Sbjct: 91 AKMVERARR 99




195|SequenceR|980|971|QQQQQLAKML

>sp|T1S1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 1 QQQQQLAKML 10
++Q+Q+AK+L
Sbjct: 169 EEQKQIAKIL 178


Query: 1 QQQQQLAKML 10
++Q+Q+AK+L
Sbjct: 379 EEQKQIAKIL 388




196|SequenceR|985|976|KQQQQQQQQQ

***** No hits found ******


197|SequenceR|990|981|GWGSLKQQQQ

>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 2 WGSLKQQQQ 10
WGSLK Q+
Sbjct: 56 WGSLKALQE 64


>sp|RNP3_THEKO|RIBONUCLEASE P protein component 3|Thermococcus kodakarensis (strain ATCC

Query: 2 WGSLKQQ 8
WGSLK++
Sbjct: 48 WGSLKEE 54


>sp|AGL15_HALVD|PROBABLE low-salt glycan biosynthesis flippase|Haloferax volcanii (strain

Query: 2 WGSLKQQQQ 10
W S +QQQ
Sbjct: 266 WSSKNEQQQ 274


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GWGSLKQQQQ 10
GW SLK+ +
Sbjct: 159 GWWSLKRAHE 168




198|SequenceR|995|986|PKSVNGWGSL

>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanothermobacter

Query: 1 PKSVNGWGSL 10
P +NGW SL
Sbjct: 273 PLKMNGWDSL 282


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 1 PKSVNGWGSL 10
PKS+N W ++
Sbjct: 225 PKSLNEWKAI 234


>sp|FLAB3_NATMM|FLAGELLIN B3|Natrialba magadii (strain ATCC 43099

Query: 3 SVNGWGS 9
+VN WGS
Sbjct: 223 NVNNWGS 229


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM

Query: 1 PKSVNGW 7
PK++ GW
Sbjct: 83 PKNMEGW 89


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 1 PKSVNGW 7
PK ++GW
Sbjct: 83 PKGMSGW 89


>sp|IPYR_SACS2|INORGANIC pyrophosphatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 VNGWGSL 10
++GWGS+
Sbjct: 149 ISGWGSV 155


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PKSVNGW 7
PK +N W
Sbjct: 59 PKELNNW 65


>sp|G3P_METVS|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 4 VNGWGSL 10
VNG+GS+
Sbjct: 6 VNGYGSI 12


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VNGWGSL 10
+ GWG+L
Sbjct: 255 ITGWGAL 261


>sp|RL22_METTH|LARGE ribosomal subunit protein uL22|Methanothermobacter

Query: 2 KSVNGWGS 9
+ +NGW S
Sbjct: 73 RGLNGWAS 80


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 4 VNGWGSL 10
+ GWG+L
Sbjct: 258 ITGWGAL 264


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 4 VNGWGSL 10
+ GWG+L
Sbjct: 258 ITGWGAL 264


>sp|Y644_METJA|UNCHARACTERIZED protein MJ0644|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SVNGWGSL 10
S N WG+L
Sbjct: 55 SYNDWGTL 62




199|SequenceR|1000|991|KTTGSPKSVN

>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 4 GSPKSVN 10
GSPKSVN
Sbjct: 363 GSPKSVN 369


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GSPKSVN 10
GSPKSV+
Sbjct: 355 GSPKSVS 361


>sp|AROC_SACI7|CHORISMATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KTTGSPKSV 9
+TTGSP +V
Sbjct: 74 RTTGSPIAV 82


>sp|AROC_SACI6|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KTTGSPKSV 9
+TTGSP +V
Sbjct: 74 RTTGSPIAV 82


>sp|AROC_SACI4|CHORISMATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KTTGSPKSV 9
+TTGSP +V
Sbjct: 74 RTTGSPIAV 82


>sp|AROC_SACI2|CHORISMATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KTTGSPKSV 9
+TTGSP +V
Sbjct: 74 RTTGSPIAV 82


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 KTTGSPKSVN 10
+ TGSP+ +N
Sbjct: 236 EATGSPQVIN 245


>sp|AROC_SACI3|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KTTGSPKSV 9
+TTGSP +V
Sbjct: 74 RTTGSPIAV 82


>sp|AROC_SACI1|CHORISMATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KTTGSPKSV 9
+TTGSP +V
Sbjct: 74 RTTGSPIAV 82


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TTGSPKSV 9
TTG PK +
Sbjct: 282 TTGKPKGI 289


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 TTGSPKSV 9
TTG PK +
Sbjct: 282 TTGKPKGI 289


>sp|Y1341_METJA|UNCHARACTERIZED protein MJ1341|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TTGSPKSVN 10
+TG+PK +N
Sbjct: 157 STGTPKILN 165


>sp|AROC_SACS2|CHORISMATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KTTGSPKSV 9
+TTGSP +V
Sbjct: 74 RTTGSPIAV 82




200|SequenceR|1005|996|IELLSKTTGS

>sp|THSG_SACS2|CHAPERONIN subunit gamma|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IELLSKTTGS 10
IELLS+ TG+
Sbjct: 315 IELLSRATGA 324


>sp|THSG_SACSH|CHAPERONIN subunit gamma|Saccharolobus shibatae (strain ATCC 51178

Query: 1 IELLSKTTGS 10
IELLS+ TG+
Sbjct: 315 IELLSRATGA 324


>sp|SYH_META3|HISTIDINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ELLSKTTG 9
ELLSK TG
Sbjct: 47 ELLSKKTG 54


>sp|SYH_METVS|HISTIDINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ELLSKTTG 9
ELLSK TG
Sbjct: 47 ELLSKKTG 54


>sp|SYH_METM6|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 IELLSKTTGS 10
ELLSK TG
Sbjct: 48 FELLSKKTGE 57


>sp|SYH_METMP|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ELLSKTTG 9
ELLSK TG
Sbjct: 47 ELLSKKTG 54


>sp|SYH_METM7|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 ELLSKTTG 9
ELLSK TG
Sbjct: 49 ELLSKKTG 56


>sp|SYH_METM5|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 ELLSKTTG 9
ELLSK TG
Sbjct: 49 ELLSKKTG 56


>sp|THIM_METVS|HYDROXYETHYLTHIAZOLE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ELLSKTTGS 10
E+LSK TG+
Sbjct: 186 EMLSKVTGT 194


>sp|THIM2_METST|HYDROXYETHYLTHIAZOLE kinase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 ELLSKTTGS 10
E++SK TGS
Sbjct: 199 EVMSKITGS 207


>sp|VAPC9_PYRAE|EXONUCLEASE VapC9|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ELLSKTTGS 10
ELL+KT G+
Sbjct: 112 ELLAKTKGA 120




201|SequenceR|1010|1001|AEEQQIELLS

>sp|CDC6_PICTO|ORC1-TYPE DNA replication protein|Picrophilus torridus (strain ATCC 700027

Query: 3 EQQIELLS 10
EQQIEL++
Sbjct: 35 EQQIELMA 42


>sp|MFNA_ARCFU|PROBABLE L-aspartate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AEEQQIEL 8
AEE+Q+EL
Sbjct: 173 AEERQVEL 180




202|SequenceR|1015|1006|KQMQRAEEQQ

***** No hits found ******


203|SequenceR|1020|1011|QQQQQKQMQR

***** No hits found ******


204|SequenceR|1025|1016|QQHQQQQQQQ

***** No hits found ******


205|SequenceR|1030|1021|RARNPQQHQQ

>sp|THIM_METLZ|HYDROXYETHYLTHIAZOLE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RARNPQQHQ 9
R RNP HQ
Sbjct: 12 RERNPLVHQ 20


>sp|RL40_HALMA|LARGE ribosomal subunit protein eL40|Haloarcula marismortui (strain

Query: 2 ARNPQQHQQ 10
ARNPQ+ QQ
Sbjct: 22 ARNPQRAQQ 30




206|SequenceR|1035|1026|SHTNNRARNP

>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 SHTNNRA 7
SH NNRA
Sbjct: 133 SHLNNRA 139




207|SequenceR|1040|1031|STHLNSHTNN

>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 2 THLNSHTNN 10
T +N+HTN+
Sbjct: 398 TDINTHTNH 406


>sp|PHP_SACS2|ARYLDIALKYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 2 THLNSHTN 9
TH N+H N
Sbjct: 169 THSNAHNN 176


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 STHLNSHTNN 10
+T LNS T+N
Sbjct: 306 ATELNSATDN 315


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 1 STHLNSHTNN 10
+T LNS T+N
Sbjct: 306 ATELNSATDN 315


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 HLNSH 7
HLNSH
Sbjct: 87 HLNSH 91


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HLNSHTNN 10
+L+SH NN
Sbjct: 30 NLSSHANN 37


>sp|COFH_METBU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcoides burtonii (strain DSM

Query: 4 LNSHTNN 10
LN+H NN
Sbjct: 278 LNTHINN 284




208|SequenceR|1045|1036|VSNGISTHLN

>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 VSNGISTHL 9
+SN ISTHL
Sbjct: 1007 ISNVISTHL 1015


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VSNGISTHLN 10
+++GI HLN
Sbjct: 26 INDGIRLHLN 35


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VSNGIST 7
VSNGI+T
Sbjct: 319 VSNGINT 325


>sp|THIL_NITMS|THIAMINE-MONOPHOSPHATE kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 SNGISTHLN 10
S+G+ST LN
Sbjct: 205 SDGLSTTLN 213




209|SequenceR|1050|1041|NISGWVSNGI

>sp|Y1282_METJA|UPF0252 protein MJ1282|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NISGWVSNGI 10
NI+ WV+N I
Sbjct: 193 NIAKWVANNI 202


>sp|Y346_METJA|UNCHARACTERIZED protein MJ0346|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ISGWVS 7
+SGWVS
Sbjct: 93 VSGWVS 98


>sp|ACYP_AERPE|ACYLPHOSPHATASE pernix (strain ATCC 700893

Query: 2 ISGWVSN 8
+SGWV N
Sbjct: 40 LSGWVRN 46


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 1 NISGWVSN 8
NIS W+ N
Sbjct: 348 NISQWIEN 355


>sp|FLAD_METJA|PUTATIVE flagella-related protein D|Methanocaldococcus jannaschii (strain

Query: 1 NISGWVSNGI 10
N GW+SN +
Sbjct: 262 NKIGWISNRV 271


>sp|PTH_METM6|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain C6 /

Query: 2 ISGWVSNG 9
+SGW++ G
Sbjct: 42 VSGWMNEG 49


>sp|PTH_METMP|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ISGWVSNG 9
+SGW++ G
Sbjct: 42 VSGWMNEG 49


>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ISGWVSNG 9
+S WV NG
Sbjct: 128 LSEWVENG 135


>sp|PTH_METM7|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain C7 /

Query: 2 ISGWVSNG 9
+SGW++ G
Sbjct: 42 VSGWMNEG 49


>sp|PTH_METM5|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain C5 /

Query: 2 ISGWVSNG 9
+SGW++ G
Sbjct: 42 VSGWMNEG 49


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 2 ISGWVSNG 9
I WV+NG
Sbjct: 217 IDEWVTNG 224


>sp|ACYP_METHJ|ACYLPHOSPHATASE hungatei JF-1 (strain ATCC

Query: 2 ISGWVSN 8
I+GWV N
Sbjct: 30 ITGWVRN 36


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 5 WVSNGI 10
WV+NG+
Sbjct: 107 WVTNGL 112


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 5 WVSNGI 10
WV+NG+
Sbjct: 107 WVTNGL 112


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 5 WVSNGI 10
WV+NG+
Sbjct: 107 WVTNGL 112


>sp|FLUC1_METAC|FLUORIDE-SPECIFIC ion channel FluC 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NISGWVSN 8
++SGWV N
Sbjct: 20 SLSGWVQN 27


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 5 WVSNGI 10
W+SNG+
Sbjct: 354 WISNGV 359


>sp|RPIA_ARCFU|RIBOSE-5-PHOSPHATE isomerase A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ISGWVSNGI 10
ISG V NGI
Sbjct: 197 ISGVVENGI 205


>sp|RL18_METST|LARGE ribosomal subunit protein uL18|Methanosphaera stadtmanae (strain

Query: 4 GWVSNG 9
GW+ NG
Sbjct: 71 GWLGNG 76


>sp|HDRE_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina acetivorans

Query: 2 ISGWVSNGI 10
ISG+V++GI
Sbjct: 200 ISGFVADGI 208




210|SequenceR|1055|1046|NPPGTNISGW

>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PPGTNI 7
PPGTNI
Sbjct: 701 PPGTNI 706


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PPGTNISGW 10
PP +N S W
Sbjct: 12 PPKSNFSEW 20


>sp|NASB_HALMT|PROBABLE nitrate transporter|Haloferax mediterranei (strain ATCC 33500

Query: 2 PPGTNISGW 10
PPG ++GW
Sbjct: 59 PPGRILTGW 67


>sp|RL18E_PICTO|LARGE ribosomal subunit protein eL18|Picrophilus torridus (strain ATCC

Query: 1 NPPGTNI 7
NP GTNI
Sbjct: 112 NPKGTNI 118


>sp|KAD6_METTH|PUTATIVE adenylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 2 PPGTNISGW 10
P G + SGW
Sbjct: 160 PGGVDFSGW 168


>sp|GPMA_METMA|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PGTNISGW 10
PG +SGW
Sbjct: 19 PGERLSGW 26


>sp|HMDH_SACS2|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NPPGTN 6
NPPG+N
Sbjct: 363 NPPGSN 368


>sp|COBQ_METMJ|PROBABLE cobyric acid synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PPGTNISGW 10
PPG +SG+
Sbjct: 278 PPGGTLSGY 286


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 NPPGTN 6
NPPG+N
Sbjct: 373 NPPGSN 378


>sp|TCPA_THEAD|NAD(+) hydrolase TcpA|Theionarchaea archaeon (strain DG-70-1)

Query: 3 PGTNISGW 10
PG I GW
Sbjct: 72 PGEKIVGW 79


>sp|RL18E_THEVO|LARGE ribosomal subunit protein eL18|Thermoplasma volcanium (strain ATCC

Query: 1 NPPGTNI 7
NP GTN+
Sbjct: 112 NPKGTNV 118


>sp|RL18E_THEAC|LARGE ribosomal subunit protein eL18|Thermoplasma acidophilum (strain

Query: 1 NPPGTNI 7
NP GTN+
Sbjct: 110 NPKGTNV 116


>sp|HEM4_METTH|PUTATIVE uroporphyrinogen-III synthase|Methanothermobacter

Query: 4 GTNISGW 10
G NI GW
Sbjct: 117 GLNIEGW 123


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NPPGTNISGW 10
NP GT GW
Sbjct: 181 NPGGTEAWGW 190


>sp|Y666_METKA|UPF0305 protein MK0666|Methanopyrus kandleri (strain AV19 /

Query: 1 NPPGTNISG 9
+PPGT G
Sbjct: 94 HPPGTEFPG 102


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NPPGTNI 7
NPP TN+
Sbjct: 212 NPPETNL 218


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NPPGTNI 7
NPP TN+
Sbjct: 212 NPPETNL 218


>sp|RS3A_METHJ|SMALL ribosomal subunit protein eS1|Methanospirillum hungatei JF-1

Query: 2 PPGTNISGW 10
P G + GW
Sbjct: 6 PTGRRVDGW 14


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPGTNISGW 10
PPGT G+
Sbjct: 214 PPGTGDEGY 222


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PPGTNISGW 10
PP T I+G+
Sbjct: 527 PPKTEITGY 535


>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NPPGTNISG 9
NP GT SG
Sbjct: 328 NPKGTTNSG 336


>sp|FLA2_PYRHO|PROBABLE flagellin PH0548|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PGTNISG 9
PGT+ISG
Sbjct: 173 PGTSISG 179


>sp|BSUHB_THEKO|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE kodakarensis (strain ATCC BAA-918

Query: 4 GTNISG 9
GTN+SG
Sbjct: 34 GTNVSG 39




211|SequenceR|1060|1051|DSAWQNPPGT

>sp|DPCKG_THEON|GTP-DEPENDENT dephospho-CoA kinase|Thermococcus onnurineus (strain NA1)

Query: 5 QNPPGT 10
QNPPGT
Sbjct: 89 QNPPGT 94


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SAWQNPPGT 10
SAW P GT
Sbjct: 1663 SAWLKPKGT 1671


>sp|DPCKG_PYRHO|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 QNPPGT 10
+NPPGT
Sbjct: 91 KNPPGT 96


>sp|DPCKG_PYRFU|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 QNPPGT 10
+NPPGT
Sbjct: 89 KNPPGT 94


>sp|DPCKG_PYRAB|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus abyssi (strain GE5 /

Query: 5 QNPPGT 10
+NPPGT
Sbjct: 91 KNPPGT 96


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SAWQNPP 8
+ W+NPP
Sbjct: 372 TPWRNPP 378


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DSAWQNPPG 9
D W+ PPG
Sbjct: 11 DYVWEIPPG 19


>sp|DPCKG_THEKO|GTP-DEPENDENT dephospho-CoA kinase|Thermococcus kodakarensis (strain ATCC

Query: 6 NPPGT 10
NPPGT
Sbjct: 90 NPPGT 94


>sp|DPCKG_METMJ|GTP-DEPENDENT dephospho-CoA kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 QNPPGT 10
+NPPGT
Sbjct: 81 KNPPGT 86


>sp|DPCKG_METTH|GTP-DEPENDENT dephospho-CoA kinase|Methanothermobacter thermautotrophicus

Query: 5 QNPPGT 10
+NPPGT
Sbjct: 79 RNPPGT 84


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 6 NPPGT 10
NPPGT
Sbjct: 54 NPPGT 58


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DSAWQNPP 8
D+ W +PP
Sbjct: 270 DATWNDPP 277


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DSAWQNPPG 9
D W NP G
Sbjct: 379 DKNWDNPNG 387


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 3 AWQNPPG 9
+W+ PPG
Sbjct: 357 SWRVPPG 363


>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DSAWQNPP 8
+ WQ PP
Sbjct: 188 EDPWQEPP 195


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 1 DSAWQNPP 8
DSAWQ P
Sbjct: 174 DSAWQELP 181


>sp|RL32_THESM|LARGE ribosomal subunit protein eL32|Thermococcus sibiricus (strain DSM

Query: 1 DSAWQNPPGT 10
D W+ P GT
Sbjct: 35 DPKWRKPKGT 44


>sp|DPCKG_METB6|GTP-DEPENDENT dephospho-CoA kinase|Methanoregula boonei (strain DSM 21154

Query: 5 QNPPGT 10
+NPPGT
Sbjct: 81 KNPPGT 86


>sp|RL15E_METAR|LARGE ribosomal subunit protein eL15|Methanocella arvoryzae (strain DSM

Query: 3 AWQNPPGT 10
AW+NP T
Sbjct: 12 AWKNPSKT 19


>sp|PYRH_IGNH4|URIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 WQNPPG 9
W+N PG
Sbjct: 170 WKNEPG 175


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DSAWQNPPGT 10
+ WQ+ PGT
Sbjct: 694 EEIWQSLPGT 703


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DSAWQNPPGT 10
+ WQ+ PGT
Sbjct: 694 EEIWQSLPGT 703


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DSAWQNPPGT 10
++ W+ P GT
Sbjct: 176 EATWERPHGT 185


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SAWQNP 7
+AW+NP
Sbjct: 135 NAWKNP 140


>sp|RL15E_METBU|LARGE ribosomal subunit protein eL15|Methanococcoides burtonii (strain

Query: 3 AWQNPPGT 10
AW+NP T
Sbjct: 12 AWKNPDET 19


>sp|DPCKG_METKA|GTP-DEPENDENT dephospho-CoA kinase|Methanopyrus kandleri (strain AV19 /

Query: 6 NPPGT 10
NPPGT
Sbjct: 88 NPPGT 92




212|SequenceR|1065|1056|ISSVLDSAWQ

>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ISSVLDSAW 9
ISS LD W
Sbjct: 73 ISSALDDGW 81


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ISSVLDSAW 9
I+ +LD AW
Sbjct: 381 INDILDYAW 389


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 SSVLDSAWQ 10
+SVLD W+
Sbjct: 175 ASVLDEKWE 183


>sp|AATE_HALVD|A-TYPE ATP synthase subunit E|Haloferax volcanii (strain ATCC 29605

Query: 3 SVLDSAWQ 10
SVLD+ W+
Sbjct: 173 SVLDTVWE 180




213|SequenceR|1070|1061|DANSWISSVL

>sp|XERA_SACS2|TYROSINE recombinase XerA|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DANSWISSVL 10
D N WISS+L
Sbjct: 57 DLNRWISSLL 66




214|SequenceR|1075|1066|NSNKTDANSW

>sp|CDRS_HALSA|TRANSCRIPTIONAL regulator CdrS|Halobacterium salinarum (strain ATCC 700922

Query: 1 NSNKTDANSW 10
+++KT A SW
Sbjct: 43 HTDKTGAKSW 52




215|SequenceR|1080|1071|DWFGMNSNKT

>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DWFGMNSNKT 10
+W G+N KT
Sbjct: 155 EWLGVNVTKT 164


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DWFGMNSNK 9
DW G N K
Sbjct: 128 DWIGRNQQK 136


>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WFGMNSNKT 10
WFG NK+
Sbjct: 112 WFGSRGNKS 120


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 3 FGMNSNKT 10
FG NSN T
Sbjct: 229 FGYNSNPT 236


>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 3 FGMNSN 8
+GMNSN
Sbjct: 93 YGMNSN 98


>sp|AMT2_ARCFU|AMMONIUM transporter Amt2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WFGMNSNKT 10
WFG N+ T
Sbjct: 250 WFGFNAGST 258


>sp|GFCR_METLZ|TRANSCRIPTIONAL regulator GfcR|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DWFGMNSNKT 10
DW ++SN T
Sbjct: 55 DWTNVSSNTT 64


>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DWFGMNSNK 9
DW M +NK
Sbjct: 68 DWHAMINNK 76


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 DWFGMN 6
DW G+N
Sbjct: 109 DWLGVN 114


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WFGMNSN 8
+FGMN N
Sbjct: 246 FFGMNGN 252


>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter thermautotrophicus

Query: 2 WFGMNS 7
WFG N+
Sbjct: 210 WFGFNA 215


>sp|SYY_THEVO|TYROSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DWFGMNSNK 9
DW M +NK
Sbjct: 67 DWHAMINNK 75


>sp|Y663_METTH|PUTATIVE ammonium transporter MTH_663|Methanothermobacter thermautotrophicus

Query: 2 WFGMNS 7
WFG N+
Sbjct: 218 WFGFNA 223


>sp|AMT3_ARCFU|AMMONIUM transporter Amt3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WFGMNS 7
WFG N+
Sbjct: 201 WFGFNA 206


>sp|FWDC_METMI|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 1 DWFGMNSNK 9
DW GM+ K
Sbjct: 140 DWRGMSGGK 148


>sp|FWDC_METMP|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 1 DWFGMNSNK 9
DW GM+ K
Sbjct: 140 DWRGMSGGK 148




216|SequenceR|1085|1076|EKVADDWFGM

>sp|RS3_IGNH4|SMALL ribosomal subunit protein uS3|Ignicoccus hospitalis (strain

Query: 2 KVADDWFGM 10
KV ++WFG+
Sbjct: 72 KVLEEWFGI 80


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EKVADDWF 8
EKVA DW+
Sbjct: 442 EKVARDWY 449


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EKVADDWF 8
E +ADDW+
Sbjct: 158 EPLADDWY 165


>sp|GCH1L_HALSA|GTP cyclohydrolase 1 type 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 EKVADDW 7
E VADDW
Sbjct: 234 EAVADDW 240


>sp|SPT4_THEKO|TRANSCRIPTION elongation factor Spt4|Thermococcus kodakarensis (strain ATCC

Query: 3 VADDWFGM 10
++DDWF +
Sbjct: 27 LSDDWFDL 34


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 ADDWFGM 10
ADDW G+
Sbjct: 256 ADDWGGV 262


>sp|KAE1_METS5|TRNA N6-adenosine threonylcarbamoyltransferase|Metallosphaera sedula

Query: 1 EKVADDW 7
EK+++DW
Sbjct: 270 EKLSNDW 276


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 DDWFGM 10
D WFG+
Sbjct: 177 DHWFGL 182


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 ADDWFGM 10
ADDW G+
Sbjct: 274 ADDWGGV 280


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 KVADDWFG 9
+VAD W G
Sbjct: 964 RVADRWIG 971


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 KVADDWFGM 10
KV + W+G+
Sbjct: 105 KVYEKWYGL 113


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 4 ADDWFGM 10
AD+W G+
Sbjct: 418 ADEWLGV 424


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 EKVADDW 7
EKV+ DW
Sbjct: 445 EKVSPDW 451


>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 2 KVADDWFG 9
KV DD FG
Sbjct: 55 KVGDDEFG 62


>sp|Y1082_METJA|UNCHARACTERIZED protein MJ1082|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKVADDWF 8
E++ DDW+
Sbjct: 98 EELLDDWY 105


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 EKVADDWF 8
E +AD+W+
Sbjct: 158 EPLADNWY 165


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 5 DDWFGM 10
D WFG+
Sbjct: 193 DHWFGL 198


>sp|CAS5B_SACS2|CRISPR-ASSOCIATED protein Cas5 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 DWFGM 10
DWFG+
Sbjct: 107 DWFGV 111




217|SequenceR|1090|1081|NRPGVEKVAD

>sp|RL10_THEGJ|LARGE ribosomal subunit protein uL10|Thermococcus gammatolerans (strain

Query: 1 NRPGVEKVAD 10
N+P +EK+AD
Sbjct: 71 NKPDLEKLAD 80


>sp|Y3581_PYRAE|UPF0210 protein PAE3581|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RPGVEKVAD 10
RP VEKVA
Sbjct: 58 RPAVEKVAS 66


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 NRPGVEKVAD 10
RPG+E +A+
Sbjct: 84 KRPGIENLAE 93


>sp|TRPC_SULAC|INDOLE-3-GLYCEROL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NRPGVEKVAD 10
+RP +EKV D
Sbjct: 18 SRPKIEKVRD 27


>sp|RL11_METTH|LARGE ribosomal subunit protein uL11|Methanothermobacter

Query: 3 PGVEKVAD 10
PG++K+AD
Sbjct: 90 PGMDKIAD 97


>sp|FLAE_METJA|PUTATIVE flagella-related protein E|Methanocaldococcus jannaschii (strain

Query: 2 RPGVEKVAD 10
R GVE V+D
Sbjct: 47 RAGVENVSD 55


>sp|Y759_PYRIL|UPF0210 protein Pisl_0759|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RPGVEKVAD 10
RP VE+VA
Sbjct: 58 RPAVERVAS 66


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 NRPGVEKVAD 10
RPG+E + D
Sbjct: 84 KRPGIEALPD 93


>sp|COBQ_METST|PROBABLE cobyric acid synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 RPGVEKVAD 10
+PG+EK+ +
Sbjct: 206 KPGIEKIEE 214


>sp|SERC_METMA|PHOSPHOSERINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NRPGVEKVAD 10
++PG EK+A+
Sbjct: 39 SKPGKEKLAE 48


>sp|SPEH_METVS|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus vannielii (strain ATCC

Query: 1 NRPGVEKV 8
++PGVEK+
Sbjct: 22 DQPGVEKM 29


>sp|SERC_METAC|PHOSPHOSERINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NRPGVEKVAD 10
++PG EK+A+
Sbjct: 39 SKPGKEKLAE 48


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 NRPGVEKVAD 10
+ PG KVAD
Sbjct: 342 DYPGYRKVAD 351


>sp|CETZ1_HALVD|TUBULIN-LIKE protein CetZ1|Haloferax volcanii (strain ATCC 29605

Query: 3 PGVEKVA 9
PG EKVA
Sbjct: 335 PGAEKVA 341


>sp|NARB_HALMT|PUTATIVE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 2 RPGVEK 7
RPG+EK
Sbjct: 113 RPGIEK 118


>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RPGVEKVAD 10
RP EKVA
Sbjct: 58 RPAAEKVAS 66


>sp|Y574_METTH|UNCHARACTERIZED protein MTH_574|Methanothermobacter thermautotrophicus (strain

Query: 1 NRPGVEKV 8
N PGVE V
Sbjct: 69 NMPGVEMV 76




218|SequenceR|1095|1086|NKNTSNRPGV

>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 1 NKNTSNRPG 9
N+N +NRP
Sbjct: 294 NENQANRPA 302




219|SequenceR|1100|1091|SANNKNKNTS

***** No hits found ******


220|SequenceR|1105|1096|VSKSLSANNK

>sp|PYRH_METAR|URIDYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VSKSLSANN 9
VSK L ANN
Sbjct: 53 VSKQLGANN 61


>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 1 VSKSLSANN 9
+SK L ANN
Sbjct: 329 ISKRLEANN 337


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 1 VSKSLSANN 9
+SK L ANN
Sbjct: 329 ISKKLEANN 337




221|SequenceR|1110|1101|RNSVGVSKSL

>sp|END4_METPE|PROBABLE endonuclease 4|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 RNSVGVSKSL 10
RN VG+S++L
Sbjct: 192 RNEVGLSRTL 201


>sp|NFI_PICTO|BIFUNCTIONAL methyltransferase/endonuclease|Picrophilus torridus (strain ATCC

Query: 1 RNSVGVSKSL 10
+ S+GV+KSL
Sbjct: 219 KPSIGVAKSL 228




222|SequenceR|1115|1106|VKKNQRNSVG

***** No hits found ******


223|SequenceR|1120|1111|KEEEEVKKNQ

>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KEEEEVKK 8
K+EE+VKK
Sbjct: 362 KKEEDVKK 369


>sp|PORB_METBF|PYRUVATE synthase subunit PorB|Methanosarcina barkeri (strain Fusaro /

Query: 3 EEEVKKNQ 10
EEE+KK Q
Sbjct: 276 EEEIKKIQ 283




224|SequenceR|1125|1116|FLKLLKEEEE

>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FLKLLKEEEE 10
F+K LKEE E
Sbjct: 212 FIKALKEETE 221


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 1 FLKLLKEE 8
FLKLL+EE
Sbjct: 287 FLKLLEEE 294


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FLKLLKEEEE 10
FLK L+EE E
Sbjct: 227 FLKALREETE 236


>sp|DHYS_PYRAE|PROBABLE deoxyhypusine synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FLKLLKEEEE 10
F+ +LK+EEE
Sbjct: 194 FIDVLKDEEE 203


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 FLKLLKEEEE 10
F+K L+EE E
Sbjct: 212 FIKALREETE 221


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 2 LKLLKEEEE 10
L+L+KEEEE
Sbjct: 284 LRLIKEEEE 292


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FLKLLKEEEE 10
FLK LKE+ E
Sbjct: 8 FLKALKEKFE 17


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FLKLLKEEEE 10
FLK LKE+ E
Sbjct: 8 FLKALKEKFE 17


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 1 FLKLLKEEEE 10
FLK LKE+ E
Sbjct: 8 FLKALKEKFE 17


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 1 FLKLLKEEEE 10
FLK LKE+ E
Sbjct: 8 FLKALKEKFE 17


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 1 FLKLLKEE 8
F+K+LKEE
Sbjct: 337 FVKVLKEE 344


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FLKLLKEEEE 10
FLK L+EE +
Sbjct: 212 FLKALREETQ 221


>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FLKLLKEEEE 10
++KLLKE E
Sbjct: 269 YMKLLKENPE 278


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FLKLLKEE 8
FLK L+EE
Sbjct: 212 FLKALREE 219


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KLLKEEEE 10
K LKEEEE
Sbjct: 105 KCLKEEEE 112


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 LKLLKEEEE 10
LK+LKE E+
Sbjct: 345 LKILKEPEK 353




225|SequenceR|1130|1121|KNVGQFLKLL

>sp|RS3A_PYRNV|SMALL ribosomal subunit protein eS1|Pyrobaculum neutrophilum (strain DSM

Query: 2 NVGQFLK 8
+VGQFLK
Sbjct: 162 DVGQFLK 168


>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KNVGQFLKLL 10
KNVG+F L
Sbjct: 328 KNVGEFCSLF 337


>sp|RS3A_PYRCJ|SMALL ribosomal subunit protein eS1|Pyrobaculum calidifontis (strain DSM

Query: 2 NVGQFLK 8
++GQFLK
Sbjct: 162 DIGQFLK 168


>sp|PFDB_PYRAE|PREFOLDIN subunit beta|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KNVGQFL 7
KNVG FL
Sbjct: 57 KNVGNFL 63


>sp|RS3A_PYRIL|SMALL ribosomal subunit protein eS1|Pyrobaculum islandicum (strain DSM

Query: 2 NVGQFLK 8
++GQFLK
Sbjct: 162 DIGQFLK 168




226|SequenceR|1135|1126|FGDQAKNVGQ

>sp|TPIS_SACS2|TRIOSEPHOSPHATE isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FGDQAKNVGQ 10
FGD+A N+G+
Sbjct: 17 FGDKAVNLGK 26


>sp|HIS51_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 FGDQAKNVGQ 10
FGD KN+ Q
Sbjct: 49 FGDSMKNISQ 58


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 FGDQAKNVGQ 10
+GDQ +N G+
Sbjct: 157 YGDQCENCGR 166


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 FGDQAKNVGQ 10
+GDQ N G+
Sbjct: 152 YGDQCDNCGR 161


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GDQAKNVGQ 10
GDQ +N G+
Sbjct: 153 GDQCENCGR 161


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GDQAKNVGQ 10
GDQ +N G+
Sbjct: 153 GDQCENCGR 161


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GDQAKNVGQ 10
GDQ +N G+
Sbjct: 153 GDQCENCGR 161


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GDQAKNVGQ 10
GDQ +N G+
Sbjct: 153 GDQCENCGR 161


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GDQAKNVGQ 10
GDQ +N G+
Sbjct: 153 GDQCENCGR 161


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 GDQAKNVGQ 10
GDQ +N G+
Sbjct: 166 GDQCENCGR 174


>sp|OGT_METAC|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FGDQAKNVG 9
+G+ AKN+G
Sbjct: 95 YGEIAKNIG 103


>sp|HIS4_METB6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanoregula boonei (strain

Query: 1 FGDQAKN 7
FGD AKN
Sbjct: 55 FGDSAKN 61




227|SequenceR|1140|1131|ECWQTFGDQA

>sp|RPO12_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus shibatae (strain ATCC

Query: 1 ECWQTFGDQ 9
+CW+TF D+
Sbjct: 8 KCWKTFTDE 16


>sp|RPO12_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus solfataricus (strain

Query: 1 ECWQTFGDQ 9
+CW+TF D+
Sbjct: 8 KCWKTFTDE 16


>sp|RPO12_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 ECWQTFGDQ 9
+CW+TF D+
Sbjct: 8 KCWKTFTDE 16


>sp|RPO12_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 ECWQTFGDQ 9
+CW+TF D+
Sbjct: 8 KCWKTFTDE 16


>sp|RPO12_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 ECWQTFGDQ 9
+CW+TF D+
Sbjct: 8 KCWKTFTDE 16


>sp|RPO12_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 ECWQTFGDQ 9
+CW+TF D+
Sbjct: 8 KCWKTFTDE 16


>sp|RPO12_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 ECWQTFGDQ 9
+CW+TF D+
Sbjct: 8 KCWKTFTDE 16


>sp|RPO12_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 ECWQTFGDQ 9
+CW+TF D+
Sbjct: 8 KCWKTFTDE 16


>sp|AROK_PYRAB|SHIKIMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 ECWQTFGD 8
E W +FGD
Sbjct: 260 EAWSSFGD 267


>sp|AROK_PYRFU|SHIKIMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ECWQTFGD 8
E W+ FGD
Sbjct: 259 EVWREFGD 266


>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter

Query: 2 CWQTF 6
CW+TF
Sbjct: 36 CWKTF 40


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WQTFGD 8
W+TFG+
Sbjct: 861 WETFGE 866


>sp|RPO12_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo12|Sulfurisphaera tokodaii (strain DSM

Query: 2 CWQTFGDQ 9
CW+ F D+
Sbjct: 9 CWREFDDE 16


>sp|RL30_AERPE|LARGE ribosomal subunit protein uL30|Aeropyrum pernix (strain ATCC

Query: 1 ECWQTFGD 8
E W T+G+
Sbjct: 52 EAWTTYGE 59


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 1 ECWQTFGDQ 9
+C +TF DQ
Sbjct: 52 DCDRTFNDQ 60




228|SequenceR|1145|1136|AHLMQECWQT

>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AHLMQECWQ 9
AH+ +ECW+
Sbjct: 257 AHIPKECWR 265


>sp|Y208_METBF|UPF0285 protein Mbar_A0208|Methanosarcina barkeri (strain Fusaro /

Query: 1 AHLMQEC 7
AHL QEC
Sbjct: 285 AHLGQEC 291


>sp|Y011_PYRAR|PROTEIN Pars_0011|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 MQECWQT 10
++ECW T
Sbjct: 151 VEECWST 157


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 AHLMQECW 8
AH +CW
Sbjct: 303 AHYASDCW 310


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 HLMQECWQT 10
HL +E W T
Sbjct: 781 HLAEELWAT 789


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AHLMQECW 8
AH +CW
Sbjct: 293 AHYATDCW 300


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 AHLMQECW 8
AH +CW
Sbjct: 307 AHYAADCW 314


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AHLMQECW 8
AH +CW
Sbjct: 299 AHYAADCW 306


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AHLMQECW 8
AH +CW
Sbjct: 307 AHYAADCW 314


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 AHLMQECW 8
AH +CW
Sbjct: 307 AHYAADCW 314


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 AHLMQECW 8
AH +CW
Sbjct: 307 AHYAADCW 314


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 AHLMQECW 8
AH +CW
Sbjct: 307 AHYAADCW 314


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HLMQECWQ 9
HL +E W+
Sbjct: 777 HLCEEVWE 784


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HLMQECWQ 9
HL +E W+
Sbjct: 777 HLCEEIWE 784


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HLMQECWQ 9
HL +E W+
Sbjct: 801 HLCEEIWE 808


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HLMQECWQ 9
HL +E W+
Sbjct: 777 HLCEEMWE 784


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HLMQECWQ 9
HL +E W+
Sbjct: 777 HLCEEIWE 784


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HLMQECWQ 9
HL +E W+
Sbjct: 787 HLCEEIWE 794


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 HLMQECWQ 9
HL +E W+
Sbjct: 790 HLCEEIWE 797


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 HLMQECWQ 9
HL +E W+
Sbjct: 790 HLCEEIWE 797


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 HLMQECWQ 9
HL +E W+
Sbjct: 790 HLCEEIWE 797




229|SequenceR|1150|1141|NATNLAHLMQ

>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NATNLAHL 8
NATNL H
Sbjct: 571 NATNLTHF 578


>sp|Y1571_ARCFU|UNCHARACTERIZED protein AF_1571|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 LAHLMQ 10
LAHLMQ
Sbjct: 100 LAHLMQ 105


>sp|Y2172_ARCFU|UNCHARACTERIZED protein AF_2172|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 LAHLMQ 10
LAHLMQ
Sbjct: 69 LAHLMQ 74




230|SequenceR|1155|1146|PVDLNNATNL

>sp|THSB_DESM0|CHAPERONIN subunit beta|Desulfurococcus mucosus (strain ATCC 35584

Query: 1 PVDLNN 6
P+DLNN
Sbjct: 146 PIDLNN 151


>sp|SYY1_PYRAE|TYROSINE--TRNA ligase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PVDLNNAT 8
P DL NAT
Sbjct: 332 PADLKNAT 339


>sp|GCH3_AERPE|GTP cyclohydrolase III|Aeropyrum pernix (strain ATCC 700893

Query: 2 VDLNNAT 8
+DLNN T
Sbjct: 133 IDLNNVT 139


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 1 PVDLNNATNL 10
P D N+AT+
Sbjct: 137 PADFNSATHF 146




231|SequenceR|1160|1151|FSVFTPVDLN

>sp|RADB_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 FSVFTPVDLN 10
F +F P+DLN
Sbjct: 85 FVIFEPMDLN 94


>sp|RADB_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 FSVFTPVDLN 10
F +F P+DLN
Sbjct: 91 FIIFEPMDLN 100


>sp|RADB_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 FSVFTPVDLN 10
F +F P+DLN
Sbjct: 81 FIIFEPMDLN 90


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FSVFTPVD 8
F+V+ PVD
Sbjct: 292 FTVYEPVD 299


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus

Query: 3 VFTPVDLN 10
V +P+DLN
Sbjct: 43 VISPIDLN 50


>sp|ACDD_METKA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanopyrus kandleri

Query: 4 FTPVDLN 10
F PVD+N
Sbjct: 257 FAPVDVN 263


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 2 SVFTPVDLN 10
S+ TP+D N
Sbjct: 5 SISTPLDFN 13


>sp|VAPC2_METJA|RIBONUCLEASE VapC2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSVFTPVDLN 10
FS+F +DLN
Sbjct: 87 FSIFQILDLN 96


>sp|Y593_PYRCJ|UPF0201 protein Pcal_0593|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 SVFTPVDL 9
+VFTPV++
Sbjct: 24 NVFTPVNI 31


>sp|Y398_ARCFU|UNCHARACTERIZED protein AF_0398|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSVFTPVDLN 10
F V+T DLN
Sbjct: 83 FHVYTEEDLN 92




232|SequenceR|1165|1156|EVEKLFSVFT

>sp|RL23_SULAC|LARGE ribosomal subunit protein uL23|Sulfolobus acidocaldarius (strain

Query: 1 EVEKLFSV 8
EVEKLFSV
Sbjct: 38 EVEKLFSV 45


>sp|P5CR_METSM|PYRROLINE-5-CARBOXYLATE reductase|Methanobrevibacter smithii

Query: 2 VEKLFSVFT 10
VEKLFS F+
Sbjct: 145 VEKLFSKFS 153


>sp|RL23_ARCFU|LARGE ribosomal subunit protein uL23|Archaeoglobus fulgidus (strain

Query: 1 EVEKLFSV 8
E+EKLF+V
Sbjct: 39 EIEKLFNV 46


>sp|RL23_SULTO|LARGE ribosomal subunit protein uL23|Sulfurisphaera tokodaii (strain

Query: 1 EVEKLFSV 8
E+EK+F+V
Sbjct: 38 EIEKMFNV 45




233|SequenceR|1170|1161|VEYPSEVEKL

>sp|METXA_HALGM|HOMOSERINE O-acetyltransferase|Haloferax gibbonsii (strain ATCC 33959

Query: 1 VEYPSEVEKL 10
V++P +VE+L
Sbjct: 166 VQFPDDVERL 175


>sp|METXA_HALPT|HOMOSERINE O-acetyltransferase|Haloferax prahovense (strain DSM 18310

Query: 1 VEYPSEVEKL 10
V++P +VE+L
Sbjct: 166 VQFPDDVERL 175


>sp|METXA_HALVD|HOMOSERINE O-acetyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 VEYPSEVEKL 10
V++P +VE+L
Sbjct: 166 VQFPDDVERL 175


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 PSEVEKL 10
PSEVEKL
Sbjct: 335 PSEVEKL 341


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VEYPSEVEKL 10
V PSE+EKL
Sbjct: 125 VTNPSEIEKL 134


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 YPSEVEKL 10
YP +VEK+
Sbjct: 342 YPEDVEKI 349


>sp|TRUD_PICTO|PROBABLE tRNA pseudouridine synthase D|Picrophilus torridus (strain ATCC

Query: 1 VEYPSEVEK 9
V+YP ++EK
Sbjct: 140 VDYPGDLEK 148


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EYPSEVEKL 10
E P+E+EKL
Sbjct: 333 ENPAEIEKL 341


>sp|Y731_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus (strain

Query: 2 EYPSEVEKL 10
+YP EVE+L
Sbjct: 285 KYPLEVERL 293


>sp|RLMH_METM7|PUTATIVE ribosomal RNA large subunit|Methanococcus maripaludis (strain C7

Query: 2 EYPSEVEK 9
E PSEVEK
Sbjct: 45 ENPSEVEK 52


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 3 YPSEVEKL 10
YP+E EKL
Sbjct: 253 YPAESEKL 260


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EYPSEVEKL 10
E P+E+EKL
Sbjct: 333 EDPAEIEKL 341


>sp|KTHY_METVS|PROBABLE thymidylate kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VEYPSEVEKL 10
VE+ SE+EK+
Sbjct: 66 VEHVSEIEKM 75


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 4 PSEVEKL 10
P EVEKL
Sbjct: 161 PGEVEKL 167


>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM

Query: 3 YPSEVEKL 10
YP+E EKL
Sbjct: 13 YPAEKEKL 20


>sp|Y1433_ARCFU|UPF0215 protein AF_1433|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PSEVEKL 10
PSE EKL
Sbjct: 142 PSEAEKL 148


>sp|REG2_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB00690|Pyrococcus abyssi

Query: 1 VEYPSEVEK 9
VEY E+EK
Sbjct: 89 VEYVKEIEK 97


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 EYPSEVEKL 10
EYP E+E L
Sbjct: 146 EYPDEMEFL 154


>sp|Y829_ARCFU|UNCHARACTERIZED protein AF_0829|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YPSEVEKL 10
YP+ VEKL
Sbjct: 112 YPNPVEKL 119




234|SequenceR|1175|1166|RIYDHVEYPS

>sp|PSTB_SACS2|PHOSPHATE import ATP-binding protein PstB|Saccharolobus solfataricus (strain

Query: 2 IYDHVEYP 9
IYD++ YP
Sbjct: 107 IYDNIAYP 114


>sp|Y738_METTH|UNCHARACTERIZED protein MTH_738|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RIYDHVEY 8
R+YD VE+
Sbjct: 161 RVYDRVEF 168


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RIYDHVEYP 9
+IY++ EYP
Sbjct: 25 KIYENFEYP 33


>sp|FTSY_HALVD|SIGNAL recognition particle receptor FtsY|Haloferax volcanii (strain ATCC

Query: 2 IYDHVEY 8
IYD VEY
Sbjct: 329 IYDGVEY 335


>sp|TKSP_THEKO|SUBTILISIN-LIKE serine protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YDHVEY 8
Y+HVEY
Sbjct: 626 YEHVEY 631


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 IYDHVEYP 9
+YD EYP
Sbjct: 1423 LYDKTEYP 1430


>sp|MTHZ_METTF|TYPE II methyltransferase M.MthZI|Methanothermobacter thermautotrophicus

Query: 1 RIYDHVEY 8
RI DH+E+
Sbjct: 288 RINDHIEF 295


>sp|RL5_METJA|LARGE ribosomal subunit protein uL5|Methanocaldococcus jannaschii (strain

Query: 2 IYDHVEYP 9
I++H+++P
Sbjct: 112 IHEHIDFP 119


>sp|RL5_HALLT|LARGE ribosomal subunit protein uL5|Halorubrum lacusprofundi (strain ATCC

Query: 2 IYDHVEYPS 10
+ DH ++PS
Sbjct: 106 VEDHTDFPS 114


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RIYDHVEYP 9
R+YD +E P
Sbjct: 361 RVYDGLEVP 369


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 1 RIYDHVEYP 9
R+YD +E P
Sbjct: 361 RVYDGLEVP 369


>sp|SPSS1_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanoregula boonei (strain DSM 21154

Query: 2 IYDHVEY 8
I DHV+Y
Sbjct: 159 IIDHVDY 165


>sp|RL5_HALMT|LARGE ribosomal subunit protein uL5|Haloferax mediterranei (strain ATCC

Query: 2 IYDHVEYPS 10
+ +H E+PS
Sbjct: 104 VEEHTEFPS 112


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 RIYDHVEY 8
+ YD VEY
Sbjct: 395 KYYDQVEY 402


>sp|Y1493_THEPD|UPF0173 metal-dependent hydrolase Tpen_1493|Thermofilum pendens (strain DSM

Query: 4 DHVEYP 9
D+VEYP
Sbjct: 223 DYVEYP 228


>sp|RL5_HALVD|LARGE ribosomal subunit protein uL5|Haloferax volcanii (strain ATCC 29605

Query: 2 IYDHVEYPS 10
+ +H E+PS
Sbjct: 104 VEEHTEFPS 112


>sp|GLCDH_THEAC|GLUCOSE 1-dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IYDHVEY 8
IYD +EY
Sbjct: 133 IYDDIEY 139


>sp|RL5_HALMA|LARGE ribosomal subunit protein uL5|Haloarcula marismortui (strain ATCC

Query: 2 IYDHVEYPS 10
+ +H E+PS
Sbjct: 109 VEEHTEFPS 117


>sp|RL5_NATPD|LARGE ribosomal subunit protein uL5|Natronomonas pharaonis (strain ATCC

Query: 2 IYDHVEYPS 10
+ +H E+PS
Sbjct: 108 VEEHTEFPS 116


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 IYDHVEYP 9
+ DHVE P
Sbjct: 38 VSDHVEIP 45


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6

Query: 2 IYDHVEYP 9
+ DHVE P
Sbjct: 38 VTDHVEIP 45


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5

Query: 2 IYDHVEYP 9
+ DHVE P
Sbjct: 38 VTDHVEIP 45


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7

Query: 2 IYDHVEYP 9
+ DHVE P
Sbjct: 38 VTDHVEIP 45


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 2 IYDHVEYP 9
+ DHVE P
Sbjct: 38 VTDHVEIP 45




235|SequenceR|1180|1171|DGLYARIYDH

>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DGLYARIYDH 10
DG+ AR++DH
Sbjct: 103 DGIMARVFDH 112


>sp|OTC_STAMF|ORNITHINE carbamoyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DGLYARIYDH 10
DG+ AR+Y+H
Sbjct: 104 DGIMARVYEH 113


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGLYARIYDH 10
DG Y IYDH
Sbjct: 22 DGFYINIYDH 31


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 DGLYARIYDH 10
D + AR+YDH
Sbjct: 103 DAIMARVYDH 112


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 1 DGLYARIYDH 10
D + AR+YDH
Sbjct: 103 DAIMARVYDH 112


>sp|RPO3_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfurisphaera tokodaii (strain DSM

Query: 1 DGLYARIY 8
DG YAR+Y
Sbjct: 90 DGCYARVY 97


>sp|RS24_NANEQ|SMALL ribosomal subunit protein eS24|Nanoarchaeum equitans (strain

Query: 3 LYARIYDH 10
+YAR+YD+
Sbjct: 68 IYARVYDN 75


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGLYARIYD 9
+GL AR+YD
Sbjct: 23 EGLKARMYD 31


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 LYARIYD 9
+YAR+YD
Sbjct: 118 IYARLYD 124


>sp|Y1546_ARCFU|UNCHARACTERIZED MscS family protein AF_1546|Archaeoglobus fulgidus (strain ATCC

Query: 1 DGLYARI 7
DGLY RI
Sbjct: 148 DGLYVRI 154


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 YARIYDH 10
Y R YDH
Sbjct: 113 YGRYYDH 119


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 2 GLYARIY 8
G YARIY
Sbjct: 378 GAYARIY 384


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DGLYARIYDH 10
DG+Y IY H
Sbjct: 564 DGVYRVIYTH 573


>sp|DHQS_HALMA|3-DEHYDROQUINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DGLYARIYD 9
DG Y RI+D
Sbjct: 110 DGGYVRIFD 118


>sp|FTRL_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Archaeoglobus fulgidus (strain

Query: 1 DGLYARI 7
DG+Y+RI
Sbjct: 18 DGIYSRI 24


>sp|RPO3_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfolobus acidocaldarius (strain

Query: 1 DGLYARIY 8
DG Y R+Y
Sbjct: 90 DGCYNRVY 97


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DGLYARIYDH 10
D + AR+Y H
Sbjct: 103 DAIMARVYAH 112


>sp|OTC_SULAC|ORNITHINE carbamoyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DGLYARIYDH 10
DG+ AR+ +H
Sbjct: 100 DGIGARVLNH 109


>sp|IF6_METMJ|TRANSLATION initiation factor 6|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GLYARIYD 9
G+YAR+++
Sbjct: 14 GVYARVFE 21


>sp|IF6_METLZ|TRANSLATION initiation factor 6|Methanocorpusculum labreanum (strain ATCC

Query: 2 GLYARIYD 9
G+YAR+++
Sbjct: 14 GVYARVFE 21


>sp|PCNA1_PYRAE|DNA polymerase sliding clamp 1|Pyrobaculum aerophilum (strain ATCC

Query: 1 DGLYARIYD 9
DGLY R D
Sbjct: 35 DGLYLRALD 43


>sp|OTCC_HALSA|ORNITHINE carbamoyltransferase, catabolic|Halobacterium salinarum (strain

Query: 1 DGLYARIYDH 10
D + AR+++H
Sbjct: 95 DAIMARLFEH 104


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 YARIYDH 10
Y R YDH
Sbjct: 113 YGRHYDH 119


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 YARIYD 9
YAR+YD
Sbjct: 132 YARMYD 137


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DGLYARIYDH 10
DG+ AR+ H
Sbjct: 100 DGIAARVLKH 109


>sp|RL6_PYRAE|LARGE ribosomal subunit protein uL6|Pyrobaculum aerophilum (strain ATCC

Query: 1 DGLYARIYDH 10
DG+Y Y+H
Sbjct: 184 DGIYVVGYEH 193


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus

Query: 2 GLYARIYDH 10
G YA + DH
Sbjct: 29 GFYAYVLDH 37


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GLYARIYD 9
G Y R+YD
Sbjct: 378 GDYGRVYD 385


>sp|HEM1_METBF|GLUTAMYL-TRNA reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DGLYARIYDH 10
DGL +Y+H
Sbjct: 28 DGLLHNLYNH 37


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 YARIYD 9
YAR+YD
Sbjct: 127 YARMYD 132


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GLYARIY 8
G+YA IY
Sbjct: 397 GIYANIY 403


>sp|OTC_METJA|ORNITHINE carbamoyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DGLYARIYDH 10
D + AR+Y H
Sbjct: 94 DTIVARVYKH 103




236|SequenceR|1185|1176|KAESTDGLYA

>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC

Query: 1 KAESTDGLY 9
KA+S DGL+
Sbjct: 3 KAQSLDGLF 11


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 1 KAESTDGLY 9
KA+S DGL+
Sbjct: 3 KAQSLDGLF 11


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 3 ESTDGLY 9
ESTDG+Y
Sbjct: 347 ESTDGVY 353


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 ESTDGLYA 10
+STDGLY
Sbjct: 469 DSTDGLYG 476


>sp|FLPA_AERPE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 3 ESTDGLYA 10
E DGLYA
Sbjct: 146 EGVDGLYA 153


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 ESTDGLY 9
E TDGLY
Sbjct: 284 EDTDGLY 290


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 TDGLYA 10
TDGLYA
Sbjct: 1001 TDGLYA 1006


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 5 TDGLYA 10
TDGLYA
Sbjct: 1079 TDGLYA 1084


>sp|THI4_METIK|THIAMINE thiazole synthase|Methanotorris igneus (strain DSM 5666

Query: 1 KAESTDGLY 9
K E DGLY
Sbjct: 97 KVEGEDGLY 105


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 5 TDGLYA 10
TDGLYA
Sbjct: 542 TDGLYA 547


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 5 TDGLYA 10
TDGLYA
Sbjct: 542 TDGLYA 547


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 TDGLYA 10
TDGLYA
Sbjct: 542 TDGLYA 547


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 5 TDGLYA 10
TDGLYA
Sbjct: 541 TDGLYA 546


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 5 TDGLYA 10
TDGLYA
Sbjct: 541 TDGLYA 546


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 ESTDGLYA 10
EST G+Y+
Sbjct: 101 ESTSGIYS 108


>sp|GLPK_HALVD|GLYCEROL kinase|Haloferax volcanii (strain ATCC 29605

Query: 3 ESTDGLY 9
ESTDG+Y
Sbjct: 348 ESTDGVY 354


>sp|DNAG_PYRCJ|DNA primase DnaG|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 AESTDGLYA 10
A STD +YA
Sbjct: 349 ANSTDSIYA 357


>sp|TRMY_METM6|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 ESTDGLYA 10
EST G+Y+
Sbjct: 101 ESTSGIYS 108


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 ESTDGLYA 10
EST G+Y+
Sbjct: 101 ESTSGIYS 108


>sp|TRMY_METM7|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 ESTDGLYA 10
EST G+Y+
Sbjct: 101 ESTSGIYS 108


>sp|GLPK_HALWD|GLYCEROL kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 ESTDGLY 9
+STDG+Y
Sbjct: 347 DSTDGVY 353




237|SequenceR|1190|1181|QKAFEKAEST

>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 AFEKAEST 10
AFEK EST
Sbjct: 9 AFEKMEST 16


>sp|AROC_ARCFU|CHORISMATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QKAFEKAEST 10
+KAFE+AE +
Sbjct: 167 EKAFERAERS 176




238|SequenceR|1195|1186|RRELFQKAFE

>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RRELFQK 7
RRELFQ+
Sbjct: 282 RRELFQR 288


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 RELFQKAFE 10
R+LF+KA E
Sbjct: 129 RDLFKKAME 137


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 3 ELFQKAFE 10
EL+QKA E
Sbjct: 1320 ELYQKALE 1327


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RRELFQK 7
RRELF+K
Sbjct: 282 RRELFKK 288


>sp|CBID_METKA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 RRELFQKAFE 10
RRELF++ E
Sbjct: 349 RRELFERVCE 358


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 RELFQKA 8
R+LFQKA
Sbjct: 125 RDLFQKA 131


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 RELFQKAFE 10
+ ++QKAFE
Sbjct: 708 KSIYQKAFE 716


>sp|AATE_IGNH4|A-TYPE ATP synthase subunit E|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RRELFQKAFE 10
++ELFQK E
Sbjct: 85 KKELFQKVVE 94


>sp|PPAC_METJA|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanocaldococcus jannaschii (strain

Query: 2 RELFQKAF 9
+E+F+KAF
Sbjct: 269 KEMFEKAF 276


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 1 RRELFQKAFE 10
RR+ F KAFE
Sbjct: 25 RRQDFFKAFE 34


>sp|Y049_METTM|UNCHARACTERIZED protein MTBMA_c00490|Methanothermobacter marburgensis (strain ATCC

Query: 1 RRELFQKAF 9
RR++F K F
Sbjct: 122 RRDIFSKIF 130


>sp|MRE11_METAC|DNA double-strand break repair protein|Methanosarcina acetivorans

Query: 1 RRELFQKAFE 10
RR+ F KAFE
Sbjct: 25 RRQDFFKAFE 34


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 1 RRELFQKAFE 10
R+E F+KA E
Sbjct: 173 RKENFRKAME 182


>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 RRELFQKAFE 10
+ ELF+KA E
Sbjct: 109 KAELFEKAIE 118


>sp|RS24_SULTO|SMALL ribosomal subunit protein eS24|Sulfurisphaera tokodaii (strain

Query: 1 RRELFQKAF 9
RREL+ K F
Sbjct: 30 RRELYIKVF 38


>sp|IDSA_METTM|SHORT chain isoprenyl diphosphate synthase|Methanothermobacter

Query: 4 LFQKAFE 10
LF KAFE
Sbjct: 114 LFSKAFE 120


>sp|IDSA_METTH|SHORT chain isoprenyl diphosphate synthase|Methanothermobacter

Query: 4 LFQKAFE 10
LF KAFE
Sbjct: 114 LFSKAFE 120




239|SequenceR|1200|1191|AKQKARRELF

>sp|COBS_PYRHO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 QKARRELF 10
+KARREL+
Sbjct: 18 EKARRELW 25


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 AKQKARREL 9
A+QKA+R+L
Sbjct: 870 ARQKAKRKL 878


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 4 KARRELF 10
KARR+LF
Sbjct: 241 KARRDLF 247


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 AKQKARRELF 10
AK+K RELF
Sbjct: 99 AKRKKFRELF 108


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 AKQKARRELF 10
AK+K RELF
Sbjct: 99 AKRKKFRELF 108


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 AKQKARRELF 10
AK+K RELF
Sbjct: 99 AKRKKFRELF 108


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 AKQKARRELF 10
AK+K RELF
Sbjct: 99 AKRKKFRELF 108


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 AKQKARRELF 10
AK+K RELF
Sbjct: 99 AKRKKFRELF 108


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 AKQKARRELF 10
AK+K RELF
Sbjct: 99 AKRKKFRELF 108




240|SequenceR|1205|1196|QRQQNAKQKA

***** No hits found ******


241|SequenceR|1210|1201|PLQQQQRQQN

***** No hits found ******


242|SequenceR|1215|1206|QQQQQPLQQQ

***** No hits found ******


243|SequenceR|1220|1211|QQPPQQQQQQ

>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QQPPQQQQQ 9
+ PPQQQ +
Sbjct: 132 EAPPQQQSK 140


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 1 QQPPQQQQQ 9
++PP QQQ
Sbjct: 83 ERPPDQQQH 91




244|SequenceR|1225|1216|PQQPPQQPPQ

>sp|DNAG_THEAC|DNA primase DnaG|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 QQPPQQPPQ 10
++PP+QPP+
Sbjct: 322 EEPPEQPPK 330


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PQQPPQQPP 9
PQ P +PP
Sbjct: 127 PQDKPSEPP 135


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PQQPPQQPP 9
P PP +PP
Sbjct: 369 PSNPPAKPP 377


>sp|NCPP_PYRNV|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum neutrophilum

Query: 3 QPPQQPPQ 10
+PP PPQ
Sbjct: 34 KPPSLPPQ 41


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PQQPPQQPP 9
PQ P +PP
Sbjct: 119 PQDKPGRPP 127


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QPPQQPPQ 10
QPP +PP+
Sbjct: 199 QPPVKPPE 206


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PQQPPQQPP 9
PQ P +PP
Sbjct: 119 PQDRPSKPP 127


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PQQPPQQP 8
P PP+QP
Sbjct: 457 PGNPPEQP 464


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PQQPPQQPP 9
PQQ PQ P
Sbjct: 600 PQQKPQLAP 608




245|SequenceR|1230|1221|SDQQQPQQPP

***** No hits found ******


246|SequenceR|1235|1226|NMGWVSDQQQ

>sp|FLAE_METVO|PUTATIVE flagella-related protein E|Methanococcus voltae

Query: 1 NMGWVSDQ 8
N+GWVSD+
Sbjct: 57 NLGWVSDK 64


>sp|RS13_CENSY|SMALL ribosomal subunit protein uS13|Cenarchaeum symbiosum (strain A)

Query: 1 NMGWVSDQQ 9
N+G+++D+Q
Sbjct: 97 NIGYLTDEQ 105


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 3 GWVSDQ 8
GW+SD+
Sbjct: 157 GWISDK 162


>sp|GGGPS_THESM|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus sibiricus (strain DSM 12597

Query: 3 GWVSD 7
GWVSD
Sbjct: 142 GWVSD 146


>sp|CETZ6_HALVD|TUBULIN-LIKE protein CetZ6|Haloferax volcanii (strain ATCC 29605

Query: 1 NMGWVSDQ 8
N GW+ +Q
Sbjct: 314 NQGWIEEQ 321


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 NMGWVSD 7
N+GW+ D
Sbjct: 467 NLGWMHD 473


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 MGWVSD 7
+GWV+D
Sbjct: 218 LGWVND 223


>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 2 MGWVSDQQ 9
+GW+SD +
Sbjct: 111 LGWLSDDE 118




247|SequenceR|1240|1231|HLTSHNMGWV

>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 4 SHNMGW 9
+H+MGW
Sbjct: 64 AHDMGW 69


>sp|HEM1_METS5|GLUTAMYL-TRNA reductase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LTSHNMGW 9
L SH +GW
Sbjct: 26 LASHYLGW 33


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LTSHNMGW 9
L H+MGW
Sbjct: 278 LRLHSMGW 285


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 HLTSHNMG 8
HLTS MG
Sbjct: 140 HLTSFEMG 147


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 HLTSHNMG 8
HLTS MG
Sbjct: 141 HLTSFEMG 148


>sp|Y1657_METJA|UNCHARACTERIZED protease MJ1657|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SHNMGWV 10
SH +GW+
Sbjct: 257 SHPIGWI 263


>sp|ASSY_METS5|ARGININOSUCCINATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LTSHNMGW 9
++S+N GW
Sbjct: 357 ISSYNKGW 364


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 4 SHNMGWV 10
SH GW+
Sbjct: 315 SHEHGWI 321


>sp|PHS_SACI6|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Saccharolobus islandicus

Query: 2 LTSHNMG 8
LT+H+MG
Sbjct: 69 LTTHDMG 75


>sp|PHS_SACI4|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Saccharolobus islandicus

Query: 2 LTSHNMG 8
LT+H+MG
Sbjct: 69 LTTHDMG 75


>sp|PHS_SACI3|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Saccharolobus islandicus

Query: 2 LTSHNMG 8
LT+H+MG
Sbjct: 69 LTTHDMG 75


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 1 HLTSHNMGWV 10
HL+ HN+ V
Sbjct: 337 HLSGHNLSEV 346


>sp|ASSY_SULAC|ARGININOSUCCINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LTSHNMGW 9
+ S+N GW
Sbjct: 357 IASYNKGW 364


>sp|ADH_THEBA|ALCOHOL dehydrogenase|Thermococcus barophilus

Query: 1 HLTSHNMGWV 10
H SH W+
Sbjct: 262 HSLSHKAAWI 271


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LTSHNMGW 9
+ S+N GW
Sbjct: 357 IASYNKGW 364




248|SequenceR|1245|1236|TQFVSHLTSH

>sp|RL22_METS3|LARGE ribosomal subunit protein uL22|Methanobrevibacter smithii (strain

Query: 3 FVSHLTSH 10
F+ H++SH
Sbjct: 113 FIEHISSH 120


>sp|RS3A_METVS|SMALL ribosomal subunit protein eS1|Methanococcus vannielii (strain

Query: 1 TQFVSHLTS 9
TQFV H T+
Sbjct: 86 TQFVGHDTT 94


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 TQFVSHLTSH 10
T+F H T H
Sbjct: 329 TEFSDHATRH 338


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 TQFVSHLTSH 10
T+F H T H
Sbjct: 329 TEFSDHATRH 338


>sp|NADK_METHJ|NAD kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TQFVSHLT 8
+ FVSHLT
Sbjct: 98 STFVSHLT 105




249|SequenceR|1250|1241|NNSQNTQFVS

>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain

Query: 2 NSQNTQFV 9
NS++T+FV
Sbjct: 15 NSEDTEFV 22




250|SequenceR|1255|1246|FNSQQNNSQN

***** No hits found ******


251|SequenceR|1260|1251|SQVAEFNSQQ

***** No hits found ******


252|SequenceR|1265|1256|KKKKGSQVAE

***** No hits found ******


253|SequenceR|1270|1261|VMKQKKKKKG

>sp|AHBD_METBF|ADOMET-DEPENDENT heme synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VMKQKKKKKG 10
+M+Q+ KK+G
Sbjct: 230 IMRQQAKKEG 239




254|SequenceR|1275|1266|SPDARVMKQK

>sp|NDK_METHJ|NUCLEOSIDE diphosphate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PDARVMKQ 9
PDARVM+
Sbjct: 41 PDARVMEH 48


>sp|PRIS_METTP|DNA primase small subunit PriS|Methanothrix thermoacetophila (strain

Query: 2 PDARVMKQK 10
PDA MK+K
Sbjct: 77 PDAPTMKEK 85




255|SequenceR|1280|1271|SFGLLSPDAR

>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii

Query: 2 FGLLSPD 8
FGLLSPD
Sbjct: 15 FGLLSPD 21


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 2 FGLLSPD 8
FG+LSPD
Sbjct: 11 FGILSPD 17


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 2 FGLLSPD 8
FG+LSPD
Sbjct: 11 FGILSPD 17


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 SFGLLSPD 8
+FGLLSP+
Sbjct: 14 TFGLLSPE 21


>sp|RS4_METLZ|SMALL ribosomal subunit protein uS4|Methanocorpusculum labreanum

Query: 2 FGLLSPDA 9
+GLL PDA
Sbjct: 85 YGLLGPDA 92


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 3 GLLSPDAR 10
GLL+P+AR
Sbjct: 30 GLLTPEAR 37


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter

Query: 1 SFGLLSPD 8
+FGL+SP+
Sbjct: 12 NFGLMSPE 19


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter

Query: 1 SFGLLSPD 8
+FGL+SP+
Sbjct: 12 NFGLMSPE 19


>sp|AATC_METST|A-TYPE ATP synthase subunit C|Methanosphaera stadtmanae (strain ATCC

Query: 1 SFGLLSPDA 9
SFG SP+A
Sbjct: 11 SFGFSSPEA 19


>sp|ILVC_METS3|KETOL-ACID reductoisomerase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 2 FGLLSPD 8
FGL+ PD
Sbjct: 113 FGLIKPD 119


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 GLLSPDAR 10
G+L+P+AR
Sbjct: 27 GVLTPEAR 34


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GLLSPDAR 10
G+L+P+AR
Sbjct: 31 GILTPEAR 38


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain

Query: 2 FGLLSPD 8
F LLSPD
Sbjct: 13 FALLSPD 19


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 1 SFGLLSP 7
SFGLL P
Sbjct: 368 SFGLLGP 374


>sp|RS4_METB6|SMALL ribosomal subunit protein uS4|Methanoregula boonei (strain DSM

Query: 3 GLLSPDA 9
GLL PDA
Sbjct: 86 GLLGPDA 92


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 SFGLLSP 7
SFGLL P
Sbjct: 368 SFGLLGP 374


>sp|RS4_METPE|SMALL ribosomal subunit protein uS4|Methanosphaerula palustris (strain

Query: 3 GLLSPDA 9
GLL PDA
Sbjct: 86 GLLGPDA 92


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 3 GLLSPDAR 10
GLL PD R
Sbjct: 543 GLLRPDGR 550


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SFGLLSPDA 9
++GL+ PDA
Sbjct: 202 NYGLIIPDA 210


>sp|Y1631_HALSA|PUTATIVE ABC transporter ATP-binding protein|Halobacterium salinarum

Query: 3 GLLSPDA 9
GLL PDA
Sbjct: 49 GLLEPDA 55




256|SequenceR|1285|1276|SSANVSFGLL

>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 2 SANVSFG 8
SANVSFG
Sbjct: 24 SANVSFG 30


>sp|ILVC3_SACS2|PUTATIVE ketol-acid reductoisomerase 3|Saccharolobus solfataricus (strain

Query: 1 SSANVSFGLL 10
S NV+FGL+
Sbjct: 107 SGYNVAFGLI 116


>sp|ILVC2_SACS2|PUTATIVE ketol-acid reductoisomerase 2|Saccharolobus solfataricus (strain

Query: 1 SSANVSFGLL 10
S NV+FGL+
Sbjct: 107 SGYNVAFGLI 116


>sp|RL5_HALSA|LARGE ribosomal subunit protein uL5|Halobacterium salinarum (strain ATCC

Query: 1 SSANVSFGL 9
++ NVSFG+
Sbjct: 99 NTGNVSFGI 107


>sp|RL5_HALS3|LARGE ribosomal subunit protein uL5|Halobacterium salinarum (strain ATCC

Query: 1 SSANVSFGL 9
++ NVSFG+
Sbjct: 99 NTGNVSFGI 107


>sp|RL5_CALMQ|LARGE ribosomal subunit protein uL5|Caldivirga maquilingensis (strain

Query: 1 SSANVSFGL 9
++ NVSFG+
Sbjct: 120 NAGNVSFGI 128


>sp|RL5_METAC|LARGE ribosomal subunit protein uL5|Methanosarcina acetivorans (strain

Query: 1 SSANVSFGL 9
S NVSFG+
Sbjct: 90 SFGNVSFGI 98


>sp|RL5_METMA|LARGE ribosomal subunit protein uL5|Methanosarcina mazei (strain ATCC

Query: 1 SSANVSFGL 9
S NVSFG+
Sbjct: 94 SLGNVSFGI 102


>sp|RL5_METBF|LARGE ribosomal subunit protein uL5|Methanosarcina barkeri (strain Fusaro

Query: 1 SSANVSFGL 9
S NVSFG+
Sbjct: 94 SLGNVSFGI 102




257|SequenceR|1290|1281|MNLRESSANV

>sp|ILVC_PYRAR|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum arsenaticum (strain DSM

Query: 1 MNLRESSANV 10
+NLR+S NV
Sbjct: 34 LNLRDSGLNV 43


>sp|ILVC_IGNAA|KETOL-ACID reductoisomerase (NAD(P)(+))|Ignisphaera aggregans (strain DSM

Query: 1 MNLRESSANV 10
+NLR+S NV
Sbjct: 34 LNLRDSGLNV 43




258|SequenceR|1299|1286|YDDLTEIEGMNLRE

>sp|HTPX2_METMA|PROTEASE HtpX homolog 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DDLTEIEGMN 11
DDL ++EGMN
Sbjct: 247 DDLRKVEGMN 256


>sp|HTPX2_METAC|PROTEASE HtpX homolog 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DDLTEIEGMN 11
+DL ++EGMN
Sbjct: 247 EDLRKVEGMN 256


>sp|ENDA_HALVD|TRNA-SPLICING endonuclease|Haloferax volcanii (strain ATCC 29605

Query: 2 DDLTEIEGMNLRE 14
DD+ ++GM LRE
Sbjct: 49 DDIDGVDGMGLRE 61


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YDDLTEIE 8
YDD TEIE
Sbjct: 525 YDDYTEIE 532


>sp|RL22_SULAC|LARGE ribosomal subunit protein uL22|Sulfolobus acidocaldarius (strain

Query: 1 YDDLTEIEGMNLRE 14
Y+ I GMNL+E
Sbjct: 32 YNVCKAIRGMNLKE 45


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 DDLTEIEGMNL 12
DDLT IE +NL
Sbjct: 874 DDLTVIEEINL 884


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 4 LTEIEGMNLRE 14
L E++G+N+RE
Sbjct: 105 LDEVDGINVRE 115


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 LTEIEGMNLRE 14
L E++G+N+RE
Sbjct: 105 LDEVDGINVRE 115


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 4 LTEIEGMNLRE 14
L E++G+N+RE
Sbjct: 105 LDEVDGINVRE 115


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 4 LTEIEGMNLRE 14
L E++G+N+RE
Sbjct: 105 LDEVDGINVRE 115


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 LTEIEGMNLRE 14
L E++G+N+RE
Sbjct: 105 LDEVDGINVRE 115


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 LTEIEGMNLRE 14
L E++G+N+RE
Sbjct: 105 LDEVDGINVRE 115


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 4 LTEIEGMNLRE 14
L E++G+N+RE
Sbjct: 105 LDEVDGINVRE 115


>sp|RISC_METTH|RIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DDLTEIEGMNLRE 14
D LT GM LRE
Sbjct: 133 DRLTREAGMGLRE 145


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DDLTEIEGMNL 12
DD+TEI G+ +
Sbjct: 792 DDVTEINGLKV 802


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 1 YDDLTEIEGMNL 12
Y D+TE EG N+
Sbjct: 279 YVDITEKEGKNV 290


>sp|RL22_PYRNV|LARGE ribosomal subunit protein uL22|Pyrobaculum neutrophilum (strain

Query: 7 IEGMNLRE 14
IEGM LR+
Sbjct: 53 IEGMTLRQ 60


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 1 YDDLTEIEGMNL 12
Y ++ EIEGM++
Sbjct: 153 YIEVLEIEGMSV 164


>sp|MPTD_METKA|DIHYDRONEOPTERIN aldolase|Methanopyrus kandleri (strain AV19 /

Query: 1 YDDLTEIEGMNLR 13
Y TE+ G NLR
Sbjct: 72 YGGYTEVSGRNLR 84


>sp|RPO1C_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Aeropyrum pernix (strain ATCC 700893

Query: 1 YDDLTEIEGMNLRE 14
Y+ + +EG NLRE
Sbjct: 259 YEYMLIVEGSNLRE 272


>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YDDLTEIEGMNLR 13
YDD+ ++EG R
Sbjct: 233 YDDIRDVEGYRER 245


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 YDDLTEIEGMNLR 13
YDD+ ++EG R
Sbjct: 232 YDDIRDVEGYRER 244


>sp|DNAK_THEVO|CHAPERONE protein DnaK|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DDLTEIEGMNLRE 14
DD + EG++LR+
Sbjct: 219 DDFQKKEGIDLRK 231


>sp|DNAK_THEAC|CHAPERONE protein DnaK|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DDLTEIEGMNLRE 14
DD + EG++LR+
Sbjct: 218 DDFQKKEGIDLRK 230


>sp|HYD2B_PYRFU|SULFHYDROGENASE 2 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YDDLTEIEGMNLRE 14
+DD+TE + N +E
Sbjct: 178 FDDVTEEDLRNFKE 191


>sp|Y1311_METJA|UNCHARACTERIZED protein MJ1311|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDDLTEIEGMNLRE 14
YD + IE N+R+
Sbjct: 253 YDGVISIENKNIRD 266


>sp|Y1313_METMA|UPF0200 protein MM_1313|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DDLTEIEGMNLRE 14
DD+ IEG+ R+
Sbjct: 129 DDMNSIEGLRHRD 141


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 1 YDDLTEIE 8
YDD+ EIE
Sbjct: 25 YDDIVEIE 32


>sp|Y975_METBF|UPF0200 protein Mbar_A0975|Methanosarcina barkeri (strain Fusaro /

Query: 2 DDLTEIEGMNLRE 14
DD+ IEG+ R+
Sbjct: 128 DDMNSIEGLRNRD 140


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LTEIEGMNLR 13
L EIEG+N R
Sbjct: 686 LLEIEGVNER 695


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 2 DDLTEIEG 9
DDL E+EG
Sbjct: 495 DDLAELEG 502


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 7 IEGMNLRE 14
I+G NLRE
Sbjct: 412 IDGKNLRE 419


>sp|PSB_ACIB4|PROTEASOME subunit beta|Aciduliprofundum boonei (strain DSM 19572

Query: 2 DDLTEIEGMNL 12
DDL+ EG+NL
Sbjct: 152 DDLSLDEGINL 162


>sp|Y1070_METJA|UNCHARACTERIZED protein MJ1070|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DDLTEIEGMNL 12
+++ ++EGMNL
Sbjct: 102 ENVLKVEGMNL 112


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 DDLTEIEGM 10
DDLT+++G+
Sbjct: 572 DDLTDVDGV 580


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YDDLTEIEGMN 11
Y+D+ + EGM+
Sbjct: 127 YEDMLKSEGMS 137


>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 2 DDLTEIEGMNLRE 14
+DL +++ NL+E
Sbjct: 106 EDLEKLKNYNLKE 118


>sp|RS17E_HALSA|SMALL ribosomal subunit protein eS17|Halobacterium salinarum (strain

Query: 3 DLTEIEGMNLR 13
+LT IE N+R
Sbjct: 37 ELTNIESKNVR 47


>sp|RS17E_HALS3|SMALL ribosomal subunit protein eS17|Halobacterium salinarum (strain

Query: 3 DLTEIEGMNLR 13
+LT IE N+R
Sbjct: 37 ELTNIESKNVR 47




THE END