GGYF2_HUMAN Blast Output
Archaea
1|Sequence|1|10|MAAETQTLNF

>sp|IF2B_METS5|TRANSLATION initiation factor 2 subunit|Metallosphaera sedula (strain ATCC

Query: 1 MAAETQTL 8
+A+ETQTL
Sbjct: 24 LASETQTL 31


>sp|RL5_SULTO|LARGE ribosomal subunit protein uL5|Sulfurisphaera tokodaii (strain

Query: 3 AETQTLN 9
AETQT+N
Sbjct: 2 AETQTVN 8




2|Sequence|6|15|QTLNFGPEWL

>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QTLNFGPEW 9
Q L+ GPEW
Sbjct: 66 QLLDLGPEW 74


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QTLNFGPEW 9
Q L+ GPEW
Sbjct: 66 QLLDLGPEW 74


>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QTLNFGPEW 9
Q L+ GPEW
Sbjct: 66 QLLDLGPEW 74


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QTLNFGPEW 9
Q L+ GPEW
Sbjct: 66 QLLDLGPEW 74


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 FGPEWL 10
FGPEW+
Sbjct: 151 FGPEWV 156


>sp|TF2B_CALMQ|TRANSCRIPTION initiation factor IIB|Caldivirga maquilingensis (strain ATCC

Query: 3 LNFGPEW 9
L+ GPEW
Sbjct: 76 LDTGPEW 82


>sp|TRM1_HALSA|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 1 QTLNFGPEWL 10
Q L GP WL
Sbjct: 265 QVLTAGPLWL 274


>sp|TRM1_HALS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 1 QTLNFGPEWL 10
Q L GP WL
Sbjct: 265 QVLTAGPLWL 274


>sp|TF2B_PYRWO|TRANSCRIPTION initiation factor IIB|Pyrococcus woesei

Query: 3 LNFGPEW 9
++ GPEW
Sbjct: 38 IDMGPEW 44


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LNFGPEW 9
++ GPEW
Sbjct: 38 IDMGPEW 44


>sp|TF2B_PYRFU|TRANSCRIPTION initiation factor IIB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LNFGPEW 9
++ GPEW
Sbjct: 38 IDMGPEW 44


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 1 QTLNFGPE 8
QT+N+ PE
Sbjct: 773 QTVNYNPE 780


>sp|TF2B_PYRAB|TRANSCRIPTION initiation factor IIB|Pyrococcus abyssi (strain GE5 /

Query: 3 LNFGPEW 9
++ GPEW
Sbjct: 38 VDMGPEW 44


>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 3 LNFGPEW 9
++ GPEW
Sbjct: 45 VDMGPEW 51


>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC

Query: 3 LNFGPEW 9
++ GPEW
Sbjct: 46 VDMGPEW 52


>sp|TF2B_METS3|TRANSCRIPTION initiation factor IIB|Methanobrevibacter smithii (strain ATCC

Query: 3 LNFGPEW 9
++ GPEW
Sbjct: 45 VDMGPEW 51


>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 1 QTLNFGPEWL 10
Q NFG E+L
Sbjct: 113 QAQNFGAEYL 122


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QTLNFGPEW 9
+ + GPEW
Sbjct: 71 KLFDIGPEW 79


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC

Query: 3 LNFGPEW 9
++ GPEW
Sbjct: 62 IDHGPEW 68


>sp|TF2B3_HALSA|TRANSCRIPTION initiation factor IIB 3|Halobacterium salinarum (strain ATCC

Query: 3 LNFGPEW 9
++ GPEW
Sbjct: 54 IDHGPEW 60


>sp|TF2B1_HALSA|TRANSCRIPTION initiation factor IIB 1|Halobacterium salinarum (strain ATCC

Query: 3 LNFGPEW 9
++ GPEW
Sbjct: 35 IDHGPEW 41


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 5 FGPEWL 10
GPEW+
Sbjct: 308 LGPEWV 313


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 FGPEWL 10
GPEW+
Sbjct: 305 LGPEWV 310


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 5 FGPEWL 10
GPEW+
Sbjct: 305 LGPEWV 310


>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 QTLNFGPEWL 10
+T F PEW+
Sbjct: 117 KTAPFRPEWI 126


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 LNFGPEWL 10
L F PEW+
Sbjct: 524 LPFDPEWV 531


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 5 FGPEWL 10
F PEW+
Sbjct: 358 FNPEWV 363


>sp|TF2B_PYROC|TRANSCRIPTION initiation factor IIB|Pyrodictium occultum

Query: 3 LNFGPEW 9
++ GPEW
Sbjct: 45 IDTGPEW 51


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LNFGPEW 9
++ GPEW
Sbjct: 61 IDAGPEW 67


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QTLNFGPEW 9
+ L FG EW
Sbjct: 245 KILEFGGEW 253


>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 1 QTLNFGPEW 9
+TL F P W
Sbjct: 185 ETLGFLPPW 193


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 NFGPEWL 10
NF EWL
Sbjct: 215 NFAKEWL 221


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 FGPEWL 10
FG EWL
Sbjct: 431 FGREWL 436


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 4 NFGPEW 9
N GP+W
Sbjct: 450 NTGPDW 455




3|Sequence|11|20|GPEWLRALSS

>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPEWLRALSS 10
G EWLRA SS
Sbjct: 437 GGEWLRAESS 446


>sp|GPGS_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PEWLRALSS 10
P+W RALS+
Sbjct: 373 PDWTRALSA 381


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EWLRALSS 10
EWL+ALSS
Sbjct: 57 EWLQALSS 64


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GPEWLRA 7
GPEW+ A
Sbjct: 423 GPEWMTA 429


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GPEWLRALSS 10
GPEW+ +++
Sbjct: 152 GPEWVTTVTA 161


>sp|ILVC_METKA|KETOL-ACID reductoisomerase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 1 GPEWLRA 7
GP W RA
Sbjct: 51 GPSWERA 57


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 1 GPEWLRALSS 10
GP WL L S
Sbjct: 274 GPVWLGPLKS 283


>sp|RL31_ARCFU|LARGE ribosomal subunit protein eL31|Archaeoglobus fulgidus (strain

Query: 2 PEWLRA 7
P WLRA
Sbjct: 22 PRWLRA 27


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 EWLRAL 8
+WLRAL
Sbjct: 741 DWLRAL 746


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 EWLRAL 8
+WLRAL
Sbjct: 741 DWLRAL 746


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 1 GPEWL 5
GP+WL
Sbjct: 321 GPDWL 325


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 GPEWL 5
GPEW+
Sbjct: 309 GPEWV 313


>sp|TF2B5_HALSA|TRANSCRIPTION initiation factor IIB 5|Halobacterium salinarum (strain ATCC

Query: 1 GPEWLR 6
GPEW R
Sbjct: 54 GPEWHR 59


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GPEWL 5
GPEW+
Sbjct: 306 GPEWV 310


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 GPEWL 5
GPEW+
Sbjct: 306 GPEWV 310


>sp|ACDA1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 3 EWLRALSS 10
+W RALS+
Sbjct: 288 DWARALSN 295


>sp|TSGBD_HALVD|GLUCOSE ABC transporter permease protein|Haloferax volcanii (strain ATCC

Query: 2 PEWLRA 7
P WLRA
Sbjct: 136 PAWLRA 141




4|Sequence|16|25|RALSSGGSIT

>sp|HPRT_ACIB4|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Aciduliprofundum boonei (strain DSM 19572

Query: 3 LSSGGSIT 10
LS+GG+IT
Sbjct: 124 LSTGGTIT 131


>sp|PGMI_THEVO|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma volcanium

Query: 2 ALSSGGSIT 10
A++SGGS++
Sbjct: 98 AITSGGSLS 106


>sp|GATE_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 1 RALSSGGSI 9
RA+ SGG +
Sbjct: 300 RAIKSGGKV 308


>sp|GATE_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Haloarcula marismortui (strain ATCC

Query: 2 ALSSGGSI 9
ALSSGG +
Sbjct: 298 ALSSGGKV 305




5|Sequence|21|30|GGSITSPPLS

>sp|RL31_IGNH4|LARGE ribosomal subunit protein eL31|Ignicoccus hospitalis (strain

Query: 2 GSITSPP 8
GSIT PP
Sbjct: 61 GSITKPP 67


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 4 ITSPPLS 10
IT PPLS
Sbjct: 209 ITRPPLS 215


>sp|ILVE_ARCFU|PUTATIVE branched-chain-amino-acid aminotransferase|Archaeoglobus fulgidus

Query: 2 GSITSPP 8
G+IT+PP
Sbjct: 195 GAITTPP 201


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus kodakarensis

Query: 1 GGSITSPPL 9
GG I PPL
Sbjct: 96 GGGIGIPPL 104


>sp|RL4_SACI7|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 GGSITSPP 8
GG +T PP
Sbjct: 94 GGRLTFPP 101


>sp|RL4_SACI1|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 GGSITSPP 8
GG +T PP
Sbjct: 94 GGRLTFPP 101


>sp|RL4_SACI2|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 GGSITSPP 8
GG +T PP
Sbjct: 94 GGRLTFPP 101


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GSITSPPL 9
G++TSPP+
Sbjct: 554 GAVTSPPV 561




6|Sequence|26|35|SPPLSPALPK

>sp|Y236_METTH|UNCHARACTERIZED protein MTH_236|Methanothermobacter thermautotrophicus (strain

Query: 1 SPPLSPAL 8
SPP+ PAL
Sbjct: 53 SPPVRPAL 60


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SPPLSPALP 9
+PPL+ A+P
Sbjct: 294 TPPLADAVP 302


>sp|K6PF_THELI|ADP-SPECIFIC phosphofructokinase|Thermococcus litoralis

Query: 1 SPPLSPALPK 10
SP L P LP+
Sbjct: 208 SPELKPYLPE 217


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain DSM

Query: 2 PPLSPALPK 10
PPLS + PK
Sbjct: 1038 PPLSESCPK 1046


>sp|RL11_NITMS|LARGE ribosomal subunit protein uL11|Nitrosopumilus maritimus (strain

Query: 2 PPLSPAL 8
PPL PAL
Sbjct: 19 PPLGPAL 25


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 PPLSPALPK 10
PPL+ A PK
Sbjct: 1070 PPLTGACPK 1078


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PPLSPALPK 10
PPL+ A PK
Sbjct: 1076 PPLTGACPK 1084


>sp|PRIS_THEVO|DNA primase small subunit PriS|Thermoplasma volcanium (strain ATCC

Query: 3 PLSPALPK 10
PLS A+PK
Sbjct: 275 PLSDAIPK 282


>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 1 SPPLSPALPK 10
SPP+ +PK
Sbjct: 227 SPPIKDRIPK 236


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 PPLSPALPK 10
PPL+ A PK
Sbjct: 1069 PPLTGACPK 1077


>sp|GPMI_NATPD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PPLSPALP 9
PPL+P P
Sbjct: 300 PPLAPEQP 307


>sp|RL11_METST|LARGE ribosomal subunit protein uL11|Methanosphaera stadtmanae (strain

Query: 2 PPLSPAL 8
PPL PA+
Sbjct: 19 PPLGPAI 25


>sp|HPRL3_HALTV|HGPRTASE-LIKE protein 3|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 PPLSPAL 8
PPL PA+
Sbjct: 35 PPLDPAV 41


>sp|RL11_METJA|LARGE ribosomal subunit protein uL11|Methanocaldococcus jannaschii

Query: 2 PPLSPAL 8
PPL PA+
Sbjct: 19 PPLGPAI 25


>sp|RL11_METBF|LARGE ribosomal subunit protein uL11|Methanosarcina barkeri (strain

Query: 2 PPLSPAL 8
PPL PAL
Sbjct: 18 PPLGPAL 24




7|Sequence|31|40|PALPKYKLAD

>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 1 PALPKYKLAD 10
P LP+ KLA+
Sbjct: 91 PTLPELKLAE 100


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PALPKY 6
PA+PKY
Sbjct: 131 PAVPKY 136


>sp|DAPF_METJA|DIAMINOPIMELATE epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ALPKYKLAD 10
+PK+KL D
Sbjct: 125 GVPKFKLKD 133


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 1 PALPKYKLAD 10
P + +YK+AD
Sbjct: 320 PNITEYKMAD 329


>sp|KADA_SULTO|ADENYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PALPKY 6
P LPKY
Sbjct: 104 PGLPKY 109


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ALPKYKLAD 10
ALPKY D
Sbjct: 367 ALPKYNEVD 375


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 2 ALPKYKLAD 10
LP YK+ D
Sbjct: 499 GLPTYKMVD 507


>sp|RS2_PICTO|SMALL ribosomal subunit protein uS2|Picrophilus torridus (strain ATCC

Query: 1 PALPKYKLA 9
PALP Y A
Sbjct: 105 PALPNYSEA 113




8|Sequence|36|45|YKLADYRYGR

>sp|MFNA_METVS|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus vannielii

Query: 1 YKLADYRY 8
YKL +YRY
Sbjct: 208 YKLKNYRY 215


>sp|ARCH_PYRNV|PROTEIN archease|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KLADYRYGR 10
K ADYRYG
Sbjct: 5 KPADYRYGE 13


>sp|DPHB_METMJ|DIPHTHINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LADYRYGR 10
L +YR+GR
Sbjct: 124 LQNYRFGR 131


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KLADYRYG 9
++ADY YG
Sbjct: 389 EMADYTYG 396


>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 5 DYRYG 9
DYRYG
Sbjct: 7 DYRYG 11


>sp|PUR8_METJA|ADENYLOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DYRYG 9
DYRYG
Sbjct: 19 DYRYG 23


>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 DYRYG 9
DYRYG
Sbjct: 7 DYRYG 11


>sp|NCPP_METAR|PROBABLE inosine/xanthosine triphosphatase|Methanocella arvoryzae (strain

Query: 1 YKLADYRYG 9
Y+ DY YG
Sbjct: 59 YRTGDYDYG 67


>sp|TRM56_METTH|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanothermobacter

Query: 1 YKLADYRYG 9
Y LADY G
Sbjct: 119 YSLADYNVG 127


>sp|Y1460_ARCFU|UNCHARACTERIZED protein AF_1460|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YKLADYR 7
YKL+DYR
Sbjct: 41 YKLSDYR 47


>sp|PUR8_ARCFU|ADENYLOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DYRYG 9
DYRYG
Sbjct: 7 DYRYG 11


>sp|Y336_METJA|UNCHARACTERIZED protein MJ0336|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LADYRYGR 10
LA YR+G+
Sbjct: 15 LAPYRFGK 22


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 YKLADYRY 8
YKLAD+ Y
Sbjct: 58 YKLADHVY 65


>sp|DPHB_METTP|DIPHTHINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LADYRYGR 10
L +YR+GR
Sbjct: 123 LQNYRFGR 130


>sp|Y1094_METJA|UNCHARACTERIZED protein MJ1094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YKLADYR 7
YKLA YR
Sbjct: 5 YKLASYR 11


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 1 YKLADYRYGR 10
+KL + YGR
Sbjct: 239 FKLRTFSYGR 248


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus

Query: 1 YKLADYRY 8
Y+LADY +
Sbjct: 44 YRLADYPW 51


>sp|WTPA_THEKO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KLADYRYGR 10
KLAD YG+
Sbjct: 174 KLADLYYGK 182


>sp|SPSS2_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ADYRYG 9
ADY+YG
Sbjct: 160 ADYKYG 165


>sp|WTPA_PYRFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KLADYRYGR 10
KLAD YG+
Sbjct: 171 KLADLYYGK 179


>sp|WTPA_PYRAB|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus abyssi (strain GE5 /

Query: 2 KLADYRYGR 10
KLAD YG+
Sbjct: 170 KLADLYYGK 178


>sp|TRM56_NITMS|TRNA (cytidine(56)-2'-O)-methyltransferase|Nitrosopumilus maritimus

Query: 1 YKLADYRYG 9
Y+LAD+ G
Sbjct: 117 YELADFNVG 125


>sp|ARCH_PYRIL|PROTEIN archease|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KLADYRYGR 10
K DYRYG
Sbjct: 5 KPVDYRYGE 13


>sp|ARCH_PYRCJ|PROTEIN archease|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KLADYRYGR 10
K A+YRYG
Sbjct: 5 KPANYRYGE 13




9|Sequence|41|50|YRYGREEMLA

>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 1 YRYGREEM 8
YRYG EEM
Sbjct: 8 YRYGSEEM 15


>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YRYGREEM 8
YRYG EEM
Sbjct: 8 YRYGSEEM 15


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YGREEML 9
YGRE+ML
Sbjct: 317 YGREKML 323


>sp|ARCR_HALS3|PROBABLE HTH-type transcriptional regulator ArcR|Halobacterium salinarum

Query: 1 YRYGREEM 8
YR GREE+
Sbjct: 90 YRLGREEI 97


>sp|Y818_PYRAE|MEMO1 family protein PAE0818|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YRYGREEML 9
Y GREE+L
Sbjct: 13 YESGREELL 21


>sp|GATD_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma volcanium (strain ATCC

Query: 3 YGREEML 9
YGREE +
Sbjct: 378 YGREEFI 384


>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RYGREE 7
+YGREE
Sbjct: 292 KYGREE 297


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RYGREEML 9
RYG+E +L
Sbjct: 38 RYGKENVL 45




10|Sequence|46|55|EEMLALFLKD

>sp|SUMT_METIV|UROPORPHYRINOGEN-III C-methyltransferase|Methanobacterium ivanovii

Query: 2 EMLALFLK 9
EML++FLK
Sbjct: 223 EMLSMFLK 230


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 1 EEMLALFLK 9
+EMLALF +
Sbjct: 248 DEMLALFAR 256


>sp|Y1626_PYRHO|MEMO1 family protein PH1626|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EMLALFLKD 10
EML+ F KD
Sbjct: 20 EMLSSFFKD 28


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EEMLALFLKD 10
EE+L + LKD
Sbjct: 585 EELLEMVLKD 594


>sp|TRPF_META3|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EEMLALFLKD 10
EE++ LF+K+
Sbjct: 195 EELIKLFIKN 204




11|Sequence|51|60|LFLKDNKIPS

>sp|HIS6_METMA|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina mazei (strain

Query: 2 FLKDNKIP 9
FLK+ KIP
Sbjct: 263 FLKERKIP 270


>sp|ARGB_METS3|ACETYLGLUTAMATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LFLKDNKIP 9
+FLK+N IP
Sbjct: 164 MFLKNNYIP 172


>sp|PDXT_METS3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanobrevibacter smithii

Query: 3 LKDNKIP 9
+KDN+IP
Sbjct: 71 IKDNRIP 77


>sp|DAPA_METAC|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LFLKDNKIPS 10
LFL+ N IP+
Sbjct: 242 LFLETNPIPA 251


>sp|Y175_METJA|UNCHARACTERIZED protein MJ0175|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DNKIPS 10
DNKIPS
Sbjct: 111 DNKIPS 116


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 LKDNKIPS 10
+K NK+PS
Sbjct: 225 MKSNKVPS 232


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FLKDNKIPS 10
+LK+N IP+
Sbjct: 236 WLKENNIPT 244


>sp|RS27A_PICTO|SMALL ribosomal subunit protein eS31|Picrophilus torridus (strain ATCC

Query: 3 LKDNKI 8
LKDNKI
Sbjct: 9 LKDNKI 14


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 FLKDNKIPS 10
+LK+N IP+
Sbjct: 238 WLKENNIPA 246


>sp|RL5_THEVO|LARGE ribosomal subunit protein uL5|Thermoplasma volcanium (strain ATCC

Query: 1 LFLKDNKIP 9
L++KD KIP
Sbjct: 79 LYVKDYKIP 87


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LKDNKIP 9
LKDN IP
Sbjct: 272 LKDNNIP 278


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLKDNKIP 9
FL++NK P
Sbjct: 62 FLRNNKFP 69


>sp|TRMJ_SULAC|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Sulfolobus acidocaldarius

Query: 4 KDNKIPS 10
+DNK+P+
Sbjct: 157 RDNKVPT 163


>sp|KTHY_ARCFU|PROBABLE thymidylate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LFLKDNKI 8
LFLKD +I
Sbjct: 61 LFLKDREI 68


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LFLKDNKIP 9
+ LK+N+IP
Sbjct: 513 VLLKENEIP 521


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 LFLKDNKI 8
+F+KD KI
Sbjct: 412 IFIKDGKI 419


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 3 LKDNKIP 9
LKD K+P
Sbjct: 123 LKDKKVP 129




12|Sequence|56|65|NKIPSDLLDK

>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain

Query: 1 NKIPSDLLDK 10
N+IP DL+++
Sbjct: 3 NRIPEDLIER 12


>sp|TVOK_THEVO|CALCIUM-GATED potassium channel TvoK|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NKIPSDLLD 9
N IP DLLD
Sbjct: 196 NAIPEDLLD 204


>sp|COFH1_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina acetivorans (strain

Query: 1 NKIPSDLLDK 10
+KIP DL+++
Sbjct: 3 SKIPEDLMER 12


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KIPSDLLD 9
K+P+D+LD
Sbjct: 190 KVPADVLD 197


>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 2 KIPSDLLDK 10
KIP +++DK
Sbjct: 65 KIPDEIIDK 73


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 NKIPSDLLD 9
NK P DLLD
Sbjct: 79 NKSPFDLLD 87


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NKIPSDLLDK 10
N + SDL+DK
Sbjct: 380 NTVNSDLIDK 389


>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 3 IPSDLLD 9
+PSD+LD
Sbjct: 219 VPSDMLD 225


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 1 NKIPSDLLDK 10
++IP DL+++
Sbjct: 3 SRIPEDLIER 12


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 1 NKIPSDLLDK 10
N IP +L+D+
Sbjct: 181 NMIPQELVDE 190


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 1 NKIPSDLLDK 10
N IP +L+D+
Sbjct: 182 NMIPQELVDE 191


>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 4 PSDLLDK 10
P DL+DK
Sbjct: 330 PDDLMDK 336


>sp|TAL_METM5|PROBABLE transaldolase|Methanococcus maripaludis (strain C5 /

Query: 3 IPSDLLDK 10
IP D+LDK
Sbjct: 184 IPFDVLDK 191


>sp|TAL_METM7|PROBABLE transaldolase|Methanococcus maripaludis (strain C7 /

Query: 3 IPSDLLDK 10
IP D+LDK
Sbjct: 184 IPFDVLDK 191


>sp|TAL_METMP|PROBABLE transaldolase|Methanococcus maripaludis (strain DSM 14266

Query: 3 IPSDLLDK 10
IP D+LDK
Sbjct: 184 IPFDVLDK 191


>sp|SYFA_METMP|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 KIPSDLLDK 10
K+P +LL+K
Sbjct: 294 KVPKELLEK 302


>sp|FDHD_METJA|PROTEIN FdhD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KIPSDLLDK 10
+IPSD++ K
Sbjct: 169 RIPSDIVKK 177


>sp|TAL_METVS|PROBABLE transaldolase|Methanococcus vannielii (strain ATCC 35089

Query: 3 IPSDLLDK 10
IP D+LDK
Sbjct: 184 IPFDVLDK 191


>sp|TAL_METM6|PROBABLE transaldolase|Methanococcus maripaludis (strain C6 /

Query: 3 IPSDLLDK 10
IP D+LDK
Sbjct: 184 IPFDVLDK 191


>sp|Y739_METJA|UNCHARACTERIZED protein MJ0739|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KIPSDLL 8
+IPSDLL
Sbjct: 21 EIPSDLL 27


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KIPSDLLD 9
K+P+++LD
Sbjct: 50 KVPAEILD 57


>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 1 NKIPSDLLDK 10
NKI +L+DK
Sbjct: 120 NKIEKELVDK 129


>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 3 IPSDLLDK 10
+P DLL+K
Sbjct: 295 VPKDLLEK 302


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 3 IPSDLLDK 10
+P DLL+K
Sbjct: 295 VPKDLLEK 302


>sp|UPPS_SACS2|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Saccharolobus

Query: 1 NKIPSDLLD 9
+K+P DL+D
Sbjct: 131 DKLPKDLID 139


>sp|DCD_HALWD|DCTP deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 KIPSDLL 8
+IPSDLL
Sbjct: 93 EIPSDLL 99




13|Sequence|61|70|DLLDKEFLPI

>sp|ARGB_METAR|ACETYLGLUTAMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DLLDKEFLPI 10
DLLDK ++P+
Sbjct: 171 DLLDKGYIPV 180


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 DLLDKEFLPI 10
DL+D E++PI
Sbjct: 223 DLVDAEWVPI 232


>sp|METK_THEKO|S-ADENOSYLMETHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DLLDKEFLPI 10
+++D+EF P+
Sbjct: 98 EMVDREFFPV 107


>sp|ARGB_METHJ|ACETYLGLUTAMATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LLDKEFLPI 10
LLD +F+P+
Sbjct: 164 LLDNQFIPV 172


>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 2 LLDKEFLPI 10
LLD++++P+
Sbjct: 165 LLDRDYIPV 173


>sp|GLPK_SACI7|GLYCEROL kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 LDKEFLP 9
+DKEF+P
Sbjct: 463 VDKEFIP 469


>sp|GLPK_SACI6|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 LDKEFLP 9
+DKEF+P
Sbjct: 463 VDKEFIP 469


>sp|GLPK_SACI4|GLYCEROL kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 LDKEFLP 9
+DKEF+P
Sbjct: 463 VDKEFIP 469


>sp|GLPK_SACI3|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 LDKEFLP 9
+DKEF+P
Sbjct: 463 VDKEFIP 469


>sp|GLPK_SACI2|GLYCEROL kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 LDKEFLP 9
+DKEF+P
Sbjct: 463 VDKEFIP 469


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LDKEFLP 9
+DKEF+P
Sbjct: 462 VDKEFIP 468


>sp|GLPK1_SACS2|GLYCEROL kinase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LDKEFLP 9
+DKEF+P
Sbjct: 463 VDKEFIP 469


>sp|DNAG_NATPD|DNA primase DnaG|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LLDKEFLPI 10
LLD EF P+
Sbjct: 428 LLDAEFAPL 436


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 DKEFLPI 10
DK+FLP+
Sbjct: 549 DKDFLPV 555


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LLDKEFLP 9
+LD++F+P
Sbjct: 262 MLDRDFVP 269


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LLDKEFLP 9
+LD++F+P
Sbjct: 262 MLDRDFVP 269


>sp|ENGB_PYRAB|PROBABLE GTP-binding protein EngB|Pyrococcus abyssi (strain GE5 /

Query: 1 DLLDKEFLPI 10
D +DK F+PI
Sbjct: 175 DEIDKTFIPI 184


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 1 DLLDKEFLPI 10
DL+ +E LP+
Sbjct: 208 DLISREILPM 217


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LDKEFLPI 10
L KEFLP+
Sbjct: 322 LGKEFLPM 329


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 DLLDKEFL 8
+L+DKEF+
Sbjct: 229 NLIDKEFI 236


>sp|MRE11_SACS2|DNA double-strand break repair protein|Saccharolobus solfataricus

Query: 1 DLLDKEFLPI 10
DLL KE LP+
Sbjct: 294 DLLYKELLPL 303


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 3 LDKEFLPI 10
L KEFLP+
Sbjct: 322 LGKEFLPM 329


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LDKEFLPI 10
L KEFLP+
Sbjct: 322 LGKEFLPM 329


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 DLLDKEFL 8
DLLD+E L
Sbjct: 96 DLLDREHL 103


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 LLDKEFLP 9
++DK FLP
Sbjct: 292 IIDKYFLP 299


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 LLDKEFLP 9
++DK FLP
Sbjct: 292 IIDKYFLP 299


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 3 LDKEFLPI 10
++KE+LP+
Sbjct: 338 INKEYLPV 345


>sp|RPO5_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermoplasma volcanium (strain ATCC

Query: 3 LDKEFLP 9
++KEFLP
Sbjct: 32 IEKEFLP 38


>sp|ARGB_META3|ACETYLGLUTAMATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LLDKEFLPI 10
LL+K+++P+
Sbjct: 166 LLEKKYIPV 174


>sp|ARGB_ARCFU|ACETYLGLUTAMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLDKEFLPI 10
LLD F+P+
Sbjct: 163 LLDNGFIPV 171




14|Sequence|66|75|EFLPILQEEP

>sp|GLPK1_SULAC|GLYCEROL kinase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EFLPILQEE 9
EF+P LQE+
Sbjct: 463 EFIPSLQED 471


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 1 EFLPILQEEP 10
+FLP+LQE+
Sbjct: 208 QFLPLLQEKK 217


>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EFLPILQE 8
E+LP+L+E
Sbjct: 158 EYLPLLKE 165


>sp|POK_METHJ|PANTOATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FLPILQEEP 10
FLP++ ++P
Sbjct: 18 FLPVIHDDP 26


>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FLPILQEEP 10
F+P+ EEP
Sbjct: 15 FVPVFHEEP 23


>sp|RHMD_CALMQ|PUTATIVE L-rhamnonate dehydratase|Caldivirga maquilingensis (strain ATCC

Query: 1 EFLPILQEEP 10
+F P+L++EP
Sbjct: 358 QFHPLLRDEP 367


>sp|Y154_ARCFU|UNCHARACTERIZED protein AF_0154|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EFLPILQEE 9
EF+ +L+EE
Sbjct: 196 EFVEVLEEE 204


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 2 FLPILQEE 9
F+PIL+E+
Sbjct: 209 FMPILEEK 216


>sp|Y762_METJA|UNCHARACTERIZED transporter MJ0762|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EFLPILQE 8
E+LPIL++
Sbjct: 31 EYLPILKD 38


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EFLPILQE 8
EFL ILQE
Sbjct: 191 EFLRILQE 198


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EFLPILQE 8
E+LP+L+E
Sbjct: 857 EWLPVLEE 864




15|Sequence|71|80|LQEEPLPPLA

>sp|AROA_METB6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 LQEEPLPPLA 10
+QE PL PLA
Sbjct: 118 MQERPLGPLA 127


>sp|GCST_AERPE|PROBABLE aminomethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LQEEPLPPLA 10
LQE PL PL
Sbjct: 363 LQEFPLVPLG 372


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 LQEEPLPPL 9
+QE PL PL
Sbjct: 117 MQERPLGPL 125


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 EPLPPL 9
EPLPP+
Sbjct: 278 EPLPPI 283


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 4 EPLPPL 9
EPLPP+
Sbjct: 278 EPLPPI 283


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 EEPLPPL 9
E+P+PPL
Sbjct: 441 EKPMPPL 447


>sp|CETZ6_HALVD|TUBULIN-LIKE protein CetZ6|Haloferax volcanii (strain ATCC 29605

Query: 3 EEPLPP 8
E PLPP
Sbjct: 237 ERPLPP 242


>sp|AATD_AERPE|A-TYPE ATP synthase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 1 LQEEPLPPL 9
L+EE +PPL
Sbjct: 110 LREETVPPL 118


>sp|Y413_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 5 PLPPLA 10
P+PPLA
Sbjct: 115 PIPPLA 120


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 EPLPPL 9
EPLPP+
Sbjct: 278 EPLPPV 283


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 EPLPPL 9
EPLPP+
Sbjct: 278 EPLPPV 283


>sp|IXTPA_METMA|DITP/XTP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LQEEPLPPLA 10
LQE+ L P+A
Sbjct: 38 LQEDELEPIA 47


>sp|GYAR_THEPD|GLYOXYLATE reductase|Thermofilum pendens (strain DSM 2475

Query: 1 LQEEPLPP 8
++EPLPP
Sbjct: 267 FEQEPLPP 274


>sp|IXTPA_METAC|DITP/XTP pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LQEEPLPPLA 10
LQE+ L P+A
Sbjct: 38 LQEDELEPIA 47


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LQEEPLPP 8
L E P PP
Sbjct: 34 LNESPFPP 41


>sp|TRPB1_AERPE|TRYPTOPHAN synthase beta chain 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 EPLPPL 9
EPLPPL
Sbjct: 17 EPLPPL 22


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LQEEPLPP 8
++EP+PP
Sbjct: 264 FEQEPIPP 271




16|Sequence|76|85|LPPLALVPFT

>sp|YR33_THEPE|UNCHARACTERIZED 33.4 kDa protein in|Thermofilum pendens

Query: 1 LPPLALVP 8
PPLA+VP
Sbjct: 11 FPPLAVVP 18


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 4 LALVPFT 10
LAL+PFT
Sbjct: 62 LALIPFT 68


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 4 LALVPFT 10
LAL+PFT
Sbjct: 62 LALIPFT 68


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 4 LALVPFT 10
LAL+PFT
Sbjct: 62 LALIPFT 68


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 4 LALVPFT 10
LAL+PFT
Sbjct: 62 LALIPFT 68


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 4 LALVPFT 10
LAL+PFT
Sbjct: 62 LALIPFT 68


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 4 LALVPFT 10
LAL+PFT
Sbjct: 62 LALIPFT 68


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 4 LALVPFT 10
LAL+PFT
Sbjct: 62 LALIPFT 68


>sp|ACYP_METS5|ACYLPHOSPHATASE sedula (strain ATCC 51363

Query: 2 PPLALV 7
PPLALV
Sbjct: 66 PPLALV 71


>sp|COFC_METPE|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 LPPLALVPF 9
+ PLA++PF
Sbjct: 1 MTPLAVIPF 9


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 LPPLALVPFT 10
LPP+ PF+
Sbjct: 230 LPPMVAKPFS 239


>sp|Y413_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 1 LPPLALVPFT 10
+PPLA VP +
Sbjct: 116 IPPLAWVPLS 125




17|Sequence|81|90|LVPFTEEEQR

>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 FTEEEQR 10
FTEEEQR
Sbjct: 667 FTEEEQR 673


>sp|COFC_METS3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LVPFTEEEQR 10
L PF EE+R
Sbjct: 20 LSPFLSEEER 29


>sp|MDH_AERPE|MALATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VPFTEEEQR 10
+P TE+E+R
Sbjct: 278 LPLTEDEKR 286


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 1 LVPFTEEE 8
L+PFT EE
Sbjct: 64 LIPFTSEE 71


>sp|RS4E_METKA|SMALL ribosomal subunit protein eS4|Methanopyrus kandleri (strain AV19 /

Query: 1 LVPFTEEEQR 10
+VP +EEE R
Sbjct: 115 VVPISEEEAR 124


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LVPFTEEE 8
L+PFT EE
Sbjct: 64 LIPFTSEE 71


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LVPFTEEE 8
L+PFT EE
Sbjct: 64 LIPFTSEE 71


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LVPFTEEE 8
L+PFT EE
Sbjct: 64 LIPFTSEE 71


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LVPFTEEE 8
L+PF +EE
Sbjct: 181 LIPFNDEE 188


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LVPFTEEE 8
L+PFT EE
Sbjct: 64 LIPFTSEE 71


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LVPFTEEE 8
L+PFT EE
Sbjct: 64 LIPFTSEE 71


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LVPFTEEE 8
L+PFT EE
Sbjct: 64 LIPFTSEE 71


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 TEEEQR 10
TEEEQR
Sbjct: 347 TEEEQR 352


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 TEEEQR 10
TEEEQR
Sbjct: 347 TEEEQR 352




18|Sequence|86|95|EEEQRNFSMS

>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EEEQRNFS 8
+EEQ+NFS
Sbjct: 239 DEEQKNFS 246


>sp|TRUA_METTP|TRNA pseudouridine synthase A|Methanothrix thermoacetophila (strain DSM

Query: 5 RNFSMS 10
RNFSMS
Sbjct: 137 RNFSMS 142




19|Sequence|91|100|NFSMSVNSAA

>sp|RL10_METBU|LARGE ribosomal subunit protein uL10|Methanococcoides burtonii (strain

Query: 2 FSMSVNSA 9
F+MSVN+A
Sbjct: 225 FNMSVNAA 232




20|Sequence|96|105|VNSAAVLRLT

***** No hits found ******


21|Sequence|101|110|VLRLTGRGGG

>sp|MVK_METJA|MEVALONATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RLTGRGGG 10
+LTG GGG
Sbjct: 272 KLTGAGGG 279


>sp|Y4659_METAC|UPF0201 protein MA_4659|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LRLTGRGG 9
RLTG GG
Sbjct: 55 FRLTGEGG 62


>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 4 LTGRGG 9
LTGRGG
Sbjct: 687 LTGRGG 692


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 4 LTGRGG 9
LTGRGG
Sbjct: 687 LTGRGG 692


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VLRLTGRGG 9
V+++TG GG
Sbjct: 459 VIKITGEGG 467


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 1 VLRLTGR 7
+LRLTGR
Sbjct: 208 LLRLTGR 214


>sp|Y1566_ARCFU|UNCHARACTERIZED protein AF_1566|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RLTGRGG 9
RLTG GG
Sbjct: 196 RLTGTGG 202


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LRLTGRGG 9
+RL+G+GG
Sbjct: 835 IRLSGKGG 842


>sp|GMHA_THEVO|PROBABLE phosphoheptose isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LRLTGRGGG 10
L +TGR GG
Sbjct: 149 LAMTGRSGG 157


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 2 LRLTGRGGG 10
LR TGRG G
Sbjct: 276 LRNTGRGSG 284


>sp|RFHPS_METJA|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VLRLTGRGG 9
+ ++TGRGG
Sbjct: 127 IAKITGRGG 135


>sp|TRPF_METB6|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanoregula boonei (strain DSM 21154

Query: 1 VLRLTGRG 8
VLR+ GRG
Sbjct: 95 VLRVIGRG 102


>sp|RS10_NANEQ|SMALL ribosomal subunit protein uS10|Nanoarchaeum equitans (strain

Query: 1 VLRLTGRGG 9
VLR+TG G
Sbjct: 49 VLRITGHRG 57


>sp|MVK_PYRAB|MEVALONATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 RLTGRGGG 10
+LTG GGG
Sbjct: 286 KLTGAGGG 293


>sp|Y2111_ARCFU|UPF0056 membrane protein AF_2111|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLRLTGRGGG 10
++RL GR G
Sbjct: 172 IIRLLGRSGA 181




22|Sequence|106|115|GRGGGGTVVG

>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRGGGGTVV 9
RGGGG+V+
Sbjct: 180 ARGGGGSVL 188


>sp|MVK_METJA|MEVALONATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRGGGGTVV 9
G GGGG V+
Sbjct: 275 GAGGGGCVI 283


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 RGGGGTV 8
+GGGGT+
Sbjct: 108 KGGGGTI 114


>sp|ARLY_METAR|ARGININOSUCCINATE lyase|Methanocella arvoryzae (strain DSM 22066

Query: 2 RGGGGTVVG 10
RG GTV+G
Sbjct: 296 RGRSGTVIG 304


>sp|ISCS2_ARCFU|CYSTEINE desulfurase IscS 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GGGGTVV 9
GGGGTVV
Sbjct: 58 GGGGTVV 64


>sp|HTPX_HALSA|PROTEASE HtpX homolog|Halobacterium salinarum (strain ATCC 700922

Query: 1 GRGGGGTVV 9
GR G GTVV
Sbjct: 101 GRKGNGTVV 109


>sp|PYRB_META3|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus aeolicus

Query: 5 GGTVVG 10
GGTVVG
Sbjct: 66 GGTVVG 71


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 1 GRGGGGTVVG 10
GRGG G V+G
Sbjct: 185 GRGGVGAVMG 194


>sp|MTIP_METTH|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanothermobacter

Query: 5 GGTVVG 10
GGTVVG
Sbjct: 169 GGTVVG 174


>sp|RPIA_PICTO|RIBOSE-5-PHOSPHATE isomerase A|Picrophilus torridus (strain ATCC 700027

Query: 2 RGGGGTVV 9
+GGGG +V
Sbjct: 93 KGGGGALV 100


>sp|CAS7_METJA|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GRGGGGT 7
+GGGGT
Sbjct: 18 AQGGGGT 24


>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 GRGGGGTV 8
G GG GTV
Sbjct: 7 GSGGSGTV 14


>sp|CYDE_METM7|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C7 /

Query: 2 RGGGGTVVG 10
+GG G V+G
Sbjct: 293 KGGMGAVIG 301


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 1 GRGGGGTVVG 10
GRGG G V+G
Sbjct: 185 GRGGVGAVMG 194


>sp|CYDE_METM5|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C5 /

Query: 2 RGGGGTVVG 10
+GG G V+G
Sbjct: 293 KGGMGAVIG 301


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 GRGGGGTVVG 10
GRGG G V+G
Sbjct: 185 GRGGVGAVMG 194


>sp|CYDE_METMP|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RGGGGTVVG 10
+GG G V+G
Sbjct: 292 KGGMGAVIG 300


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GRGGGGTV 8
G G GGTV
Sbjct: 83 GGGDGGTV 90


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GRGGGGTV 8
G G GGTV
Sbjct: 91 GGGDGGTV 98




23|Sequence|111|120|GTVVGAPRGR

>sp|TRPE_ARCFU|ANTHRANILATE synthase component 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GTVVGAPRGR 10
GTV GAP+ R
Sbjct: 325 GTVTGAPKLR 334


>sp|TRPE_SACS2|ANTHRANILATE synthase component 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GTVVGAPR 8
GTV GAP+
Sbjct: 332 GTVSGAPK 339


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 GTVVGAPRGR 10
GT+ GAP+ R
Sbjct: 394 GTITGAPKPR 403


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GTVVGAPRGR 10
GT+ GAP+ R
Sbjct: 383 GTLSGAPKVR 392


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 1 GTVVGAPRGR 10
GTV GAP+ R
Sbjct: 361 GTVSGAPKIR 370


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 GTVVGAPRGR 10
GT+ GAP+ R
Sbjct: 387 GTITGAPKPR 396


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 GTVVGAPRGR 10
GTV GAP+ R
Sbjct: 363 GTVSGAPKIR 372


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TVVGAPR 8
T+VGAP+
Sbjct: 126 TIVGAPK 132


>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GTVVGAPRGR 10
GTV GAP+ R
Sbjct: 345 GTVSGAPKPR 354


>sp|TRPE2_HALSA|ANTHRANILATE synthase component 1 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTVVGAPRGR 10
GT+ GAP+ R
Sbjct: 385 GTITGAPKPR 394


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 1 GTVVGAPR 8
G+++G PR
Sbjct: 293 GSIIGQPR 300


>sp|PYRC_PYRAB|DIHYDROOROTASE abyssi (strain GE5 /

Query: 3 VVGAPRG 9
V+G PRG
Sbjct: 389 VIGKPRG 395


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTVVGAPRGR 10
G V+GA RGR
Sbjct: 726 GVVLGAVRGR 735


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 GTVVGAPRGR 10
G V+GA RGR
Sbjct: 726 GVVLGAVRGR 735


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GTVVGAPRGR 10
GT+ GAP+ R
Sbjct: 343 GTLTGAPKIR 352


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 1 GTVVGAPRGR 10
GT+ GAP+ R
Sbjct: 422 GTLTGAPKVR 431


>sp|DEOC_HALLT|DEOXYRIBOSE-PHOSPHATE aldolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 TVVGAPRGR 10
TVVG P G+
Sbjct: 60 TVVGFPHGQ 68


>sp|TRPE1_HALSA|ANTHRANILATE synthase component 1 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTVVGAPRGR 10
GT+ GAP+ R
Sbjct: 423 GTLSGAPKVR 432


>sp|TRPE2_HALMA|ANTHRANILATE synthase component 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 GTVVGAPRGR 10
GT+ GAP+ R
Sbjct: 424 GTLSGAPKIR 433




24|Sequence|116|125|APRGRSSSRG

>sp|DGGGP_HALWD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PRGRSSSRG 10
PRG S RG
Sbjct: 81 PRGAISERG 89


>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 APRGRSSS 8
AP+G SSS
Sbjct: 58 APKGSSSS 65




25|Sequence|121|130|SSSRGRGRGR

>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 3 SRGRGRGR 10
SRGRG+GR
Sbjct: 356 SRGRGKGR 363


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 3 SRGRGRGR 10
SRGRG+GR
Sbjct: 355 SRGRGKGR 362


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 GRGRGR 10
GRGRG+
Sbjct: 127 GRGRGK 132


>sp|PDAD_PICTO|PYRUVOYL-DEPENDENT arginine decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 3 SRGRGRGR 10
+RG GRGR
Sbjct: 12 TRGIGRGR 19


>sp|Y2543_HALSA|PROTEIN VNG_2543C|Halobacterium salinarum (strain ATCC 700922

Query: 2 SSRGRGRGR 10
S+RGRGR R
Sbjct: 56 STRGRGRLR 64


>sp|PMDHS_METTH|PHOSPHOMEVALONATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 3 SRGRGRG 9
SRG+GRG
Sbjct: 9 SRGKGRG 15


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 SSSRGRGRGR 10
+++RG RGR
Sbjct: 1328 NANRGNARGR 1337




26|Sequence|126|135|RGRGRGECGF

>sp|G6PI_HALMA|PROBABLE glucose-6-phosphate isomerase|Haloarcula marismortui (strain ATCC

Query: 1 RGRGRGECGF 10
+GR +GE G+
Sbjct: 38 QGRNKGEFGY 47


>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 RGRGRG 6
RGRG+G
Sbjct: 357 RGRGKG 362


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 1 RGRGRG 6
RGRG+G
Sbjct: 356 RGRGKG 361


>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain

Query: 1 RGRGRGE 7
R RGRGE
Sbjct: 81 RARGRGE 87


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RGRGRGECGF 10
RGRG+G +
Sbjct: 267 RGRGQGHADY 276


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 4 GRGECG 9
GR ECG
Sbjct: 755 GRAECG 760


>sp|NADK_METPE|NAD kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 GRGRGECGF 10
G RGE GF
Sbjct: 81 GINRGEVGF 89


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 1 RGRGRGECGF 10
RG+G +C F
Sbjct: 290 RGKGCEKCNF 299


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RGRGRGEC 8
RG+G G+C
Sbjct: 265 RGQGLGKC 272




27|Sequence|131|140|GECGFYQRSF

>sp|Y440_METJA|UNCHARACTERIZED protein MJ0440|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ECGFYQRSF 10
+CG+ +RSF
Sbjct: 108 DCGYIERSF 116


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 243 GQVGFHQRT 251


>sp|RL3_META3|LARGE ribosomal subunit protein uL3|Methanococcus aeolicus (strain ATCC

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 249 GQVGFHQRT 257


>sp|RL3_PYRNV|LARGE ribosomal subunit protein uL3|Pyrobaculum neutrophilum (strain DSM

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 255 GQMGFHQRT 263


>sp|RL3_PYRIL|LARGE ribosomal subunit protein uL3|Pyrobaculum islandicum (strain DSM

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 259 GQMGFHQRT 267


>sp|RL3_PYRCJ|LARGE ribosomal subunit protein uL3|Pyrobaculum calidifontis (strain DSM

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 255 GQMGFHQRT 263


>sp|RL3_PYRAR|LARGE ribosomal subunit protein uL3|Pyrobaculum arsenaticum (strain DSM

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 255 GQMGFHQRT 263


>sp|RL3_PYRAE|LARGE ribosomal subunit protein uL3|Pyrobaculum aerophilum (strain ATCC

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 255 GQMGFHQRT 263


>sp|RL3_METVS|LARGE ribosomal subunit protein uL3|Methanococcus vannielii (strain ATCC

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 250 GQMGFHQRT 258


>sp|RL3_METVA|LARGE ribosomal subunit protein uL3|Methanococcus vannielii

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 250 GQMGFHQRT 258


>sp|RL3_METMP|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain DSM

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 250 GQMGFHQRT 258


>sp|RL3_METM7|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C7

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 250 GQMGFHQRT 258


>sp|RL3_METM6|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C6

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 250 GQMGFHQRT 258


>sp|RL3_METM5|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C5

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 250 GQMGFHQRT 258


>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 1 GECGFYQRS 9
G+ GF+QR+
Sbjct: 247 GQMGFHQRT 255


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GFYQRSF 10
GFY+R F
Sbjct: 1478 GFYKRGF 1484


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 4 GFYQRSF 10
GFY+R F
Sbjct: 581 GFYKRGF 587


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 4 GFYQRSF 10
GFY+R F
Sbjct: 582 GFYKRGF 588


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GFYQRSF 10
GFY+R F
Sbjct: 582 GFYKRGF 588


>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 GECGFYQRSF 10
G+ FY RSF
Sbjct: 360 GKSAFYFRSF 369


>sp|MOBB_METJA|PUTATIVE molybdopterin-guanine dinucleotide biosynthesis

Query: 1 GECGFYQRSF 10
G CG+ R+F
Sbjct: 156 GHCGYNCRTF 165


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 4 GFYQRSF 10
GFY+R F
Sbjct: 1330 GFYRRGF 1336


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 4 GFYQRSF 10
GFY+R F
Sbjct: 581 GFYRRGF 587


>sp|DPOL2_METTH|DNA polymerase PolB subunit 2|Methanothermobacter thermautotrophicus

Query: 4 GFYQRSF 10
GFY+R F
Sbjct: 36 GFYRRGF 42


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 ECGFYQR 8
ECG Y R
Sbjct: 528 ECGSYMR 534


>sp|Y012_METJA|TNPB-LIKE protein MJ0012|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ECGFYQRSF 10
+CG + R F
Sbjct: 102 KCGIFDRQF 110


>sp|Y834_METJA|UNCHARACTERIZED protein MJ0834|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CGFYQRSF 10
CG Y++S+
Sbjct: 19 CGCYEKSY 26


>sp|Y2167_ARCFU|UNCHARACTERIZED protein AF_2167|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GECGFY 6
G+C FY
Sbjct: 307 GDCNFY 312




28|Sequence|136|145|YQRSFDEVEG

>sp|PDXS_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Metallosphaera sedula (strain

Query: 1 YQRSFDEVE 9
Y+ SFDEVE
Sbjct: 4 YELSFDEVE 12


>sp|KPRS1_ARCFU|RIBOSE-PHOSPHATE pyrophosphokinase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YQRSFDEVEG 10
Y RS D V+G
Sbjct: 91 YARSLDTVKG 100


>sp|TF2B5_HALSA|TRANSCRIPTION initiation factor IIB 5|Halobacterium salinarum (strain ATCC

Query: 1 YQRSFDE 7
Y+R+FDE
Sbjct: 7 YERAFDE 13


>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter thermautotrophicus

Query: 1 YQRSFDEVEG 10
YQR +EV+G
Sbjct: 159 YQRIVEEVKG 168


>sp|RIBL_METIM|FAD synthase|Methanocaldococcus infernus (strain DSM 11812

Query: 2 QRSFDEVE 9
QR+FDE E
Sbjct: 95 QRTFDEEE 102


>sp|GFCR_METBU|TRANSCRIPTIONAL regulator GfcR|Methanococcoides burtonii (strain DSM 6242

Query: 1 YQRSFDEVEG 10
+ R+F +VEG
Sbjct: 134 FSRNFADVEG 143


>sp|CS3HE_METJA|CRISPR-ASSOCIATED helicase Cas3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RSFDEVE 9
+SFDEVE
Sbjct: 460 KSFDEVE 466


>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 1 YQRSFDEVE 9
Y+RS DE++
Sbjct: 286 YRRSLDELQ 294


>sp|Y1363_THEON|UPF0282 protein TON_1363|Thermococcus onnurineus (strain NA1)

Query: 1 YQRSFDEVE 9
Y R FDE+E
Sbjct: 252 YPRFFDELE 260


>sp|UPPS_METAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 1 YQRSFDEVEG 10
+QRS +EV+G
Sbjct: 84 FQRSEEEVDG 93


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RSFDEV 8
RSFDEV
Sbjct: 13 RSFDEV 18


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RSFDEV 8
RSFDEV
Sbjct: 13 RSFDEV 18


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 2 QRSFDEVE 9
QR+ DE+E
Sbjct: 270 QRAIDEIE 277


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RSFDEV 8
RSFDEV
Sbjct: 13 RSFDEV 18


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RSFDEV 8
RSFDEV
Sbjct: 13 RSFDEV 18


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RSFDEV 8
RSFDEV
Sbjct: 13 RSFDEV 18


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RSFDEV 8
RSFDEV
Sbjct: 13 RSFDEV 18


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 YQRSFD 6
Y+RSFD
Sbjct: 907 YERSFD 912


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 2 QRSFDEVEG 10
Q + DE+EG
Sbjct: 196 QTNLDEIEG 204




29|Sequence|141|150|DEVEGVFGRG

>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 DEVEGVFGRG 10
DE+E VFG+G
Sbjct: 1093 DEIELVFGKG 1102


>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 1 DEVEGVFGR 9
D VEG+FGR
Sbjct: 148 DAVEGLFGR 156


>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DEVEGVFGR 9
DEV+G+ GR
Sbjct: 104 DEVDGISGR 112


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DEVEGVFGRG 10
DE+E + GR
Sbjct: 113 DEIEAILGRA 122


>sp|FLAB1_THEKO|FLAGELLIN B1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DEVEGVFGRG 10
D ++GVFG G
Sbjct: 248 DTIQGVFGEG 257


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DEVEGVFGRG 10
DE++G++ R
Sbjct: 107 DEIDGIYSRA 116


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DEVEGVFG 8
DE+EGV G
Sbjct: 125 DELEGVIG 132


>sp|HTPX_THEKO|PROTEASE HtpX homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DEVEGVFG 8
DE+EGV G
Sbjct: 125 DELEGVIG 132


>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DEVEGVFG 8
DE+EG+ G
Sbjct: 358 DEIEGILG 365


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DEVEGVF 7
D+VEG+F
Sbjct: 220 DDVEGIF 226


>sp|Y1071_METJA|UNCHARACTERIZED protein MJ1071|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DEVEGVFGRG 10
D++ G+FG G
Sbjct: 223 DKILGLFGEG 232


>sp|RFCL_METJA|REPLICATION factor C large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DEVEGVFGR 9
DEV+G+ G+
Sbjct: 104 DEVDGISGK 112


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EVEGVFGRG 10
+VEG F RG
Sbjct: 317 DVEGTFDRG 325


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DEVEGVFGRG 10
DEVEGV R
Sbjct: 196 DEVEGVMYRS 205


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 DEVEGVFG 8
DEV+G+ G
Sbjct: 103 DEVDGIHG 110


>sp|Y623_METJA|PROBABLE metallophosphoesterase MJ0623|Methanocaldococcus jannaschii

Query: 4 EGVFGRG 10
EG++GRG
Sbjct: 5 EGIWGRG 11


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 1 DEVEGVFG 8
DEV+G+ G
Sbjct: 103 DEVDGIHG 110


>sp|RTCA_SULTO|RNA 3'-terminal phosphate cyclase|Sulfurisphaera tokodaii (strain DSM

Query: 2 EVEGVFGRG 10
E++G FG G
Sbjct: 3 EIDGSFGEG 11


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 DEVEGVFG 8
DEV+G+ G
Sbjct: 108 DEVDGISG 115


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 1 DEVEGVFG 8
DEV+G+ G
Sbjct: 110 DEVDGISG 117


>sp|RTCA_SACI4|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 2 EVEGVFGRG 10
E++G FG G
Sbjct: 3 EIDGSFGEG 11


>sp|RTCA_SACI3|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 2 EVEGVFGRG 10
E++G FG G
Sbjct: 3 EIDGSFGEG 11


>sp|RTCA_SACI1|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 2 EVEGVFGRG 10
E++G FG G
Sbjct: 3 EIDGSFGEG 11


>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 1 DEVEGVFGRG 10
DEV V GRG
Sbjct: 495 DEVTDVSGRG 504


>sp|RTCA_SACI7|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 2 EVEGVFGRG 10
E++G FG G
Sbjct: 3 EIDGSFGEG 11


>sp|RTCA_SACI6|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 2 EVEGVFGRG 10
E++G FG G
Sbjct: 3 EIDGSFGEG 11


>sp|RTCA_SACI2|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 2 EVEGVFGRG 10
E++G FG G
Sbjct: 3 EIDGSFGEG 11




30|Sequence|146|155|VFGRGGGREM

>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VFGRGGGRE 9
+FGRGGG +
Sbjct: 226 IFGRGGGEK 234


>sp|CDC68_HALSA|ORC1-TYPE DNA replication protein 8|Halobacterium salinarum (strain ATCC

Query: 2 FGRGGGR 8
+GRGGG+
Sbjct: 366 YGRGGGQ 372


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GRGGGRE 9
G+GGG+E
Sbjct: 862 GKGGGKE 868


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VFGRGGGREM 10
+FGRG RE+
Sbjct: 588 IFGRGVRREI 597


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 VFGRGGGRE 9
VFG+GGG +
Sbjct: 1098 VFGKGGGDQ 1106


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 VFGRGGGRE 9
+FG+GGG +
Sbjct: 227 IFGKGGGEK 235


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 1 VFGRGGGREM 10
+FG GGG ++
Sbjct: 225 IFGEGGGEKL 234


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VFGRGGGREM 10
+FG GGG ++
Sbjct: 225 IFGEGGGEKL 234


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 FGRGGGRE 9
FG GGRE
Sbjct: 169 FGYAGGRE 176


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFGRGGGRE 9
+ G+GGG++
Sbjct: 91 IIGKGGGKD 99


>sp|SUMT_METJA|UROPORPHYRINOGEN-III C-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VFGRGG 6
VFGRGG
Sbjct: 93 VFGRGG 98


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VFGRGGGREM 10
+FG GGG ++
Sbjct: 225 IFGEGGGEKL 234


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 FGRGGGRE 9
+ RGGG+E
Sbjct: 528 YARGGGQE 535


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 GRGGGR 8
GRGGG+
Sbjct: 875 GRGGGK 880


>sp|SUMT_METIV|UROPORPHYRINOGEN-III C-methyltransferase|Methanobacterium ivanovii

Query: 1 VFGRGG 6
VFGRGG
Sbjct: 90 VFGRGG 95


>sp|PUR7_PYRAE|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FGRGGGR 8
FGR GGR
Sbjct: 175 FGRRGGR 181


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 3 GRGGGREM 10
GRGGG M
Sbjct: 377 GRGGGMYM 384


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GRGGGRE 9
+GGGRE
Sbjct: 861 AKGGGRE 867


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 FGRGGGRE 9
FG GGRE
Sbjct: 166 FGWAGGRE 173


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 2 FGRGGGRE 9
FG GGRE
Sbjct: 151 FGFAGGRE 158


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GRGGGRE 9
G+GGG++
Sbjct: 862 GKGGGKD 868


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 GRGGGRE 9
G+GGG++
Sbjct: 862 GKGGGKD 868


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 GRGGGRE 9
G+GGG++
Sbjct: 862 GKGGGKD 868


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 GRGGGRE 9
G+GGG++
Sbjct: 862 GKGGGKD 868


>sp|DHYS_PICTO|PROBABLE deoxyhypusine synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 VFGRGGG 7
+FGR GG
Sbjct: 28 MFGRSGG 34


>sp|SUMT_METBF|S-ADENOSYL-L-METHIONINE-DEPENDENT uroporphyrinogen III methyltransferase|Methanosarcina barkeri

Query: 1 VFGRGG 6
VFGRGG
Sbjct: 96 VFGRGG 101


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 3 GRGGGRE 9
GRGG R+
Sbjct: 97 GRGGARD 103


>sp|HEM1_ARCFU|GLUTAMYL-TRNA reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VFGRGGGR 8
VFG G GR
Sbjct: 405 VFGDGNGR 412


>sp|F16A1_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 VFGRGGG 7
VFG GGG
Sbjct: 174 VFGFGGG 180




31|Sequence|151|160|GGREMHRSQS

>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GREMHRS 8
GREMH+S
Sbjct: 592 GREMHKS 598


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GREMHRS 8
GREMH+S
Sbjct: 592 GREMHKS 598


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GREMHRS 8
GREMH+S
Sbjct: 532 GREMHKS 538


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GREMHRS 8
GREMH+S
Sbjct: 595 GREMHKS 601


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GREMHRS 8
GREMH+S
Sbjct: 595 GREMHKS 601


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GREMHRS 8
GREMH+S
Sbjct: 601 GREMHKS 607


>sp|FTR_METBU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GGREMH 6
GGR+MH
Sbjct: 135 GGRKMH 140


>sp|Y2294_THEKO|UPF0128 protein TK2294|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GGREMHRSQS 10
GG+E H S++
Sbjct: 60 GGKEYHISET 69


>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GGREMH 6
GGRE+H
Sbjct: 150 GGREIH 155




32|Sequence|156|165|HRSQSWEERG

>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RSQSWEERG 10
R ++W+E+G
Sbjct: 360 RHRAWKEKG 368


>sp|CUTB_SULAC|GLYCERALDEHYDE dehydrogenase medium chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 HRSQSWEER 9
HR SW R
Sbjct: 258 HRGSSWYRR 266


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 6 WEERG 10
WEERG
Sbjct: 381 WEERG 385


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HRSQSWEERG 10
H+ WEE+G
Sbjct: 727 HQFVDWEEKG 736


>sp|GATD_HALWD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HRSQSWE 7
HRS WE
Sbjct: 436 HRSVPWE 442


>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SQSWEERG 10
S+ WEE+G
Sbjct: 41 SKVWEEKG 48


>sp|GYAR_THEON|GLYOXYLATE reductase|Thermococcus onnurineus (strain NA1)

Query: 2 RSQSWEERG 10
RS W++RG
Sbjct: 127 RSGEWKKRG 135


>sp|Y1462_ARCFU|UNCHARACTERIZED protein AF_1462|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RSQSWEERG 10
R + W+ RG
Sbjct: 165 REEKWKNRG 173


>sp|G1PDH_THEPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermofilum pendens (strain DSM 2475

Query: 5 SWEERG 10
SW ERG
Sbjct: 211 SWTERG 216


>sp|ENGB_ARCFU|PROBABLE GTP-binding protein EngB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SQSWEERG 10
++ WE+RG
Sbjct: 101 AERWEKRG 108


>sp|GYAR_PYRHO|GLYOXYLATE reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RSQSWEERG 10
RS W++RG
Sbjct: 127 RSGEWKKRG 135


>sp|PGK2_METMP|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RSQSWEER 9
R SWEE+
Sbjct: 157 RKSSWEEQ 164


>sp|GYAR_PYRAB|GLYOXYLATE reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 RSQSWEERG 10
RS W++RG
Sbjct: 128 RSGEWKKRG 136


>sp|KGSDH_HALVD|ALPHA-KETOGLUTARATE semialdehyde dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 3 SQSWEERG 10
S++W E+G
Sbjct: 458 SETWREQG 465


>sp|PRIS_METKA|DNA primase small subunit PriS|Methanopyrus kandleri (strain AV19 /

Query: 1 HRSQSWEERG 10
HR+ +W RG
Sbjct: 247 HRTLTWPGRG 256


>sp|GYAR_THEKO|GLYOXYLATE reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RSQSWEERG 10
RS W+ RG
Sbjct: 127 RSGEWKRRG 135


>sp|RTCA_THEON|RNA 3'-terminal phosphate cyclase|Thermococcus onnurineus (strain NA1)

Query: 2 RSQSWEER 9
R + WEER
Sbjct: 167 RVEPWEER 174


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 1 HRSQSWEERG 10
++ + W+ERG
Sbjct: 586 YKLRGWDERG 595




33|Sequence|161|170|WEERGDRRFE

>sp|SPEH_PYRFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEERGDRR 8
WEE+ DRR
Sbjct: 128 WEEKLDRR 135


>sp|SPEH_PYRHO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WEERGDRR 8
WEER DRR
Sbjct: 128 WEERLDRR 135


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WEERGD 6
WE+RGD
Sbjct: 373 WEDRGD 378


>sp|SPEH_PYRAB|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 WEERGDRR 8
WEE+ DRR
Sbjct: 128 WEEKLDRR 135


>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 WEERGDR 7
WE RGDR
Sbjct: 79 WEVRGDR 85


>sp|CPGS_THESM|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus sibiricus (strain

Query: 1 WEERGDRR 8
WE +G+R+
Sbjct: 427 WELKGERK 434


>sp|DMD_SACS2|DIPHOSPHOMEVALONATE decarboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WEERGDRRF 9
W +RGD R
Sbjct: 19 WGKRGDERL 27


>sp|CAS1A_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RGDRRFE 10
RG+RR+E
Sbjct: 333 RGERRYE 339


>sp|Y940_THEON|UPF0248 protein TON_0940|Thermococcus onnurineus (strain NA1)

Query: 1 WEERGDRRFE 10
WE R DRR E
Sbjct: 76 WETRKDRRGE 85


>sp|DTDA_METTP|D-AMINOACYL-TRNA deacylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 WEERGDRRF 9
W+E G RF
Sbjct: 28 WDEEGTLRF 36


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 WEERGDRRFE 10
W+ERG E
Sbjct: 185 WDERGQMDIE 194


>sp|HEM3_ARCFU|PROBABLE porphobilinogen deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RGDRRFE 10
RGD RFE
Sbjct: 134 RGDLRFE 140


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 2 EERGDRRF 9
EERGDR
Sbjct: 227 EERGDREL 234


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 EERGDRRF 9
EERGDR
Sbjct: 227 EERGDREL 234


>sp|RS6E_THESM|SMALL ribosomal subunit protein eS6|Thermococcus sibiricus (strain DSM

Query: 2 EERGDRR 8
+ERG+RR
Sbjct: 97 QERGERR 103


>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 1 WEERGDRRFE 10
WE +GD + +
Sbjct: 222 WEPKGDTKVD 231


>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 2 EERGDRRF 9
EERGDR
Sbjct: 227 EERGDREL 234


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WEERGDRRFE 10
W++RGD R E
Sbjct: 224 WKKRGDYRDE 233




34|Sequence|166|175|DRRFEKPGRK

>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DRRFEKPGRK 10
DR +E+PG K
Sbjct: 331 DREWERPGAK 340


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DRRFEKPGR 9
D F+KPGR
Sbjct: 308 DITFDKPGR 316


>sp|IF2B_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 DRRFEKP 7
DRRFE P
Sbjct: 24 DRRFEMP 30


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 RFEKPG 8
RFE+PG
Sbjct: 343 RFEQPG 348




35|Sequence|171|180|KPGRKDVGRP

>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 RKDVGRP 10
RK++GRP
Sbjct: 1144 RKEIGRP 1150


>sp|RSMA_METAC|PROBABLE ribosomal RNA small subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 PGRKDVGR 9
PGRKD R
Sbjct: 144 PGRKDYSR 151


>sp|RADA_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 4 RKDVGR 9
RKDVGR
Sbjct: 73 RKDVGR 78


>sp|Y1552_ARCFU|UNCHARACTERIZED transporter AF_1552|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 KDVGRP 10
+DVGRP
Sbjct: 56 RDVGRP 61


>sp|CMR6_SACS2|CRISPR system CMR subunit Cmr6|Saccharolobus solfataricus (strain ATCC

Query: 4 RKDVGRP 10
R+DVG+P
Sbjct: 245 REDVGKP 251


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 PGRKDVGRP 10
PG D RP
Sbjct: 448 PGNHDAARP 456


>sp|RNP1_PYRHO|RIBONUCLEASE P protein component 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGRKDVGRP 10
PG + VGRP
Sbjct: 108 PGERLVGRP 116


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PGRKDV 7
PGRKD+
Sbjct: 587 PGRKDL 592


>sp|RNP1_PYRAB|RIBONUCLEASE P protein component 1|Pyrococcus abyssi (strain GE5 /

Query: 2 PGRKDVGRP 10
PG + VGRP
Sbjct: 108 PGERLVGRP 116


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 PGRKDVGRP 10
PG D RP
Sbjct: 451 PGNHDAARP 459


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 2 PGRKDVGR 9
PGR VGR
Sbjct: 331 PGRWSVGR 338




36|Sequence|176|185|DVGRPNFEEG

>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 DVGRPNFEEG 10
DV +P FEEG
Sbjct: 85 DVEKPEFEEG 94


>sp|Y1287_METJA|UNCHARACTERIZED protein MJ1287|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RPNFEE 9
+PNFEE
Sbjct: 250 KPNFEE 255


>sp|ICMT_METAC|PROTEIN-S-ISOPRENYLCYSTEINE O-methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 RPNFEE 9
RPNFE+
Sbjct: 38 RPNFEK 43


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GRPNFEE 9
GRP F+E
Sbjct: 386 GRPGFDE 392


>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 2 VGRPNFEE 9
VGRP+F E
Sbjct: 101 VGRPDFCE 108


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VGRPNFEE 9
VGRP+F E
Sbjct: 101 VGRPDFCE 108


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VGRPNFEEG 10
VGRP+F E
Sbjct: 103 VGRPDFCEA 111


>sp|FOLD_PICTO|BIFUNCTIONAL protein FolD|Picrophilus torridus (strain ATCC 700027

Query: 2 VGRPNF 7
VG+PNF
Sbjct: 202 VGKPNF 207


>sp|GLFT_PICTO|GLUTAMATE formimidoyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 5 PNFEEG 10
PNF EG
Sbjct: 13 PNFSEG 18


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DVGRPNFE 8
D+GRP ++
Sbjct: 270 DIGRPRYD 277


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 3 GRPNFE 8
G+PNFE
Sbjct: 434 GQPNFE 439


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 3 GRPNFE 8
G+PNFE
Sbjct: 436 GQPNFE 441


>sp|NTPPA_METMA|DTTP/UTP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VGRPNFEE 9
+G+PNF E
Sbjct: 80 LGKPNFPE 87


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 3 GRPNFE 8
G+PNFE
Sbjct: 436 GQPNFE 441


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 DVGRPNFEEG 10
D+ RP +EE
Sbjct: 155 DIYRPRYEES 164


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DVGRPNFEEG 10
++GRPN G
Sbjct: 213 ELGRPNAHRG 222


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DVGRPNFEEG 10
++GRPN G
Sbjct: 213 ELGRPNAHRG 222


>sp|ASSY_HALMA|ARGININOSUCCINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DVGRPNF 7
DVG+P++
Sbjct: 40 DVGQPDY 46


>sp|GLFT_THEAC|GLUTAMATE formimidoyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 5 PNFEEG 10
PNF EG
Sbjct: 8 PNFSEG 13


>sp|HIS7_HALWD|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GRPNFE 8
GRP+FE
Sbjct: 126 GRPHFE 131




37|Sequence|181|190|NFEEGGPTSV

>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FEEGGPTSV 10
FEEG PT +
Sbjct: 454 FEEGVPTGI 462


>sp|REG1_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF0054|Pyrococcus furiosus

Query: 1 NFEEGGPT 8
NF+EGG T
Sbjct: 146 NFKEGGVT 153


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FEEGGPT 8
FEEG PT
Sbjct: 275 FEEGAPT 281


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 1 NFEEGGPTSV 10
++ EGGP +V
Sbjct: 88 SYREGGPCAV 97


>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 4 EGGPTSV 10
EGGP+S+
Sbjct: 147 EGGPSSL 153


>sp|NADK_NATPD|NAD kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NFEEGGP 7
N EGGP
Sbjct: 179 NLSEGGP 185


>sp|NFI_NATPD|ENDONUCLEASE V|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FEEGGP 7
F EGGP
Sbjct: 95 FREGGP 100


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 1 NFEEGGPTSV 10
++ EGGP V
Sbjct: 121 DYREGGPEGV 130


>sp|NADK_HALSA|NAD kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NFEEGGP 7
N EGGP
Sbjct: 186 NLSEGGP 192


>sp|NADK_HALS3|NAD kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NFEEGGP 7
N EGGP
Sbjct: 186 NLSEGGP 192


>sp|NADK_HALLT|NAD kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 NFEEGGP 7
N EGGP
Sbjct: 184 NLSEGGP 190


>sp|PSB_HALMD|PROTEASOME subunit beta|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 NFEEGGP 7
NF GGP
Sbjct: 128 NFARGGP 134


>sp|PSB_NATPD|PROTEASOME subunit beta|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NFEEGGP 7
NF GGP
Sbjct: 130 NFARGGP 136




38|Sequence|186|195|GPTSVGRKHE

>sp|SFSA_ARCFU|SUGAR fermentation stimulation protein homolog|Archaeoglobus fulgidus

Query: 2 PTSVGRKH 9
PT+ GRKH
Sbjct: 140 PTARGRKH 147


>sp|SFSA_SACS2|SUGAR fermentation stimulation protein homolog|Saccharolobus solfataricus

Query: 1 GPTSVGRKH 9
PT GRKH
Sbjct: 154 APTERGRKH 162


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 PTSVGRKHE 10
P ++G++HE
Sbjct: 295 PITIGKRHE 303


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 SVGRKH 9
SVGRKH
Sbjct: 472 SVGRKH 477


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPTSVGRK 8
GPT+VG++
Sbjct: 56 GPTAVGQR 63


>sp|SFSA_SACI6|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 1 GPTSVGRKH 9
PT GR+H
Sbjct: 154 APTERGRRH 162


>sp|SFSA_SACI3|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 1 GPTSVGRKH 9
PT GR+H
Sbjct: 154 APTERGRRH 162


>sp|SFSA_SACI2|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 1 GPTSVGRKH 9
PT GR+H
Sbjct: 154 APTERGRRH 162


>sp|SFSA_METST|SUGAR fermentation stimulation protein homolog|Methanosphaera stadtmanae

Query: 1 GPTSVGRKH 9
PT G+KH
Sbjct: 151 APTKRGKKH 159


>sp|SFSA_METTH|SUGAR fermentation stimulation protein homolog|Methanothermobacter

Query: 1 GPTSVGRKH 9
PT GR+H
Sbjct: 150 APTERGRRH 158


>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC

Query: 1 GPTSVGR 7
GPT VG+
Sbjct: 62 GPTGVGK 68


>sp|PGK2_PYRFU|2-PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GPTSVGR 7
GPT VG+
Sbjct: 97 GPTGVGK 103


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPTSVG 6
GPTSVG
Sbjct: 132 GPTSVG 137


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GPTSVG 6
GPTSVG
Sbjct: 132 GPTSVG 137


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 5 VGRKHE 10
VGRKH+
Sbjct: 85 VGRKHQ 90


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 5 VGRKHE 10
VGRKH+
Sbjct: 85 VGRKHQ 90


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 VGRKHE 10
VGRKH+
Sbjct: 85 VGRKHQ 90


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 5 VGRKHE 10
VGRKH+
Sbjct: 85 VGRKHQ 90




39|Sequence|191|200|GRKHEFIRSE

>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GRKHEFIRSE 10
G+ +EFIRSE
Sbjct: 542 GKTYEFIRSE 551


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 RKHEFIRS 9
+KHEF+ S
Sbjct: 374 KKHEFVLS 381


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 RKHEFIRS 9
+KHEF+ S
Sbjct: 374 KKHEFVLS 381


>sp|DTDA_THEGJ|D-AMINOACYL-TRNA deacylase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GRKHEF 6
G+KHEF
Sbjct: 183 GKKHEF 188


>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GRKHEFIRSE 10
G HEF+R +
Sbjct: 33 GTAHEFLRGK 42


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RKHEFIRSE 10
R HEF+R E
Sbjct: 361 RVHEFLRIE 369


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 RKHEFIRSE 10
R +EF+RSE
Sbjct: 355 RVNEFLRSE 363


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GRKHEFIRS 9
G+KH+F+ +
Sbjct: 397 GKKHDFVHT 405




40|Sequence|196|205|FIRSESENWR

>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FIRSESENW 9
FIR+E +W
Sbjct: 378 FIRAEQTHW 386


>sp|PTH_METBU|PEPTIDYL-TRNA hydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 3 RSESENWR 10
RS+ ENW+
Sbjct: 38 RSDLENWK 45


>sp|RL2_METMJ|LARGE ribosomal subunit protein uL2|Methanoculleus marisnigri (strain

Query: 2 IRSESENW 9
+RS SE W
Sbjct: 180 VRSSSERW 187


>sp|MTAP_SACS2|S-METHYL-5'-THIOADENOSINE phosphorylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RSESENWR 10
R+ES WR
Sbjct: 173 RAESRTWR 180


>sp|RLME_PICTO|RIBOSOMAL RNA large subunit methyltransferase|Picrophilus torridus (strain

Query: 1 FIRSESENWR 10
+IR++ EN+R
Sbjct: 8 YIRAKRENYR 17


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IRSESENWR 10
IRS E WR
Sbjct: 195 IRSNDEVWR 203


>sp|PUR7_NITMS|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 FIRSESEN 8
FI+ ESEN
Sbjct: 63 FIKRESEN 70




41|Sequence|201|210|SENWRIFREE

>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 2 ENWRIFREE 10
E+WR+ R+E
Sbjct: 451 EDWRVLRDE 459


>sp|PORD_PYRAB|PYRUVATE synthase subunit PorD|Pyrococcus abyssi (strain GE5 /

Query: 3 NWRIFREE 10
+WR+FR E
Sbjct: 40 SWRVFRPE 47


>sp|HISX_METTH|HISTIDINOL dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ENWRIFREE 10
EN+R+ REE
Sbjct: 59 ENFRVSREE 67


>sp|PYRDB_THEKO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermococcus kodakarensis

Query: 4 WRIFRE 9
W++FRE
Sbjct: 271 WKVFRE 276


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ENWRIFRE 9
E W IFRE
Sbjct: 301 EAWEIFRE 308


>sp|PORD_PYRHO|PYRUVATE synthase subunit PorD|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NWRIFREE 10
+WR+F+ E
Sbjct: 40 SWRVFKPE 47


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SENWRIFREE 10
+E+WR R+E
Sbjct: 451 AEDWREIRDE 460


>sp|PORD_PYRFU|PYRUVATE synthase subunit PorD|Pyrococcus furiosus (strain ATCC 43587

Query: 3 NWRIFREE 10
+WR+F+ E
Sbjct: 40 SWRVFKPE 47


>sp|FLUC_PYRAB|FLUORIDE-SPECIFIC ion channel FluC|Pyrococcus abyssi (strain GE5 /

Query: 1 SENWRIF 7
S WRIF
Sbjct: 62 SSEWRIF 68


>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 ENWRIFRE 9
E W +FRE
Sbjct: 299 EAWELFRE 306


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 WRIFRE 9
WR++RE
Sbjct: 488 WRMYRE 493


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 WRIFRE 9
WR++RE
Sbjct: 488 WRMYRE 493


>sp|GUAAB_METMP|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 2 ENWRIFREE 10
E W+IF+E+
Sbjct: 66 EIWKIFKEQ 74


>sp|GUAAB_METM7|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 2 ENWRIFREE 10
E W+IF+E+
Sbjct: 66 EIWKIFKEQ 74


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 4 WRIFREE 10
WR FR+E
Sbjct: 454 WRKFRDE 460


>sp|MOBA_PYRFU|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus furiosus

Query: 3 NWRIFRE 9
NW+ FRE
Sbjct: 54 NWQKFRE 60


>sp|GUAAB_METVS|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 1 SENWRIFREE 10
+E W IF+E+
Sbjct: 65 NEIWNIFKEQ 74


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 3 NWRIFRE 9
+W+IFRE
Sbjct: 682 DWQIFRE 688


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 1 SENWRIFREE 10
S+ +R+FR+E
Sbjct: 49 SDRYRVFRDE 58


>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SENWRIF 7
SE WR+F
Sbjct: 115 SEYWRMF 121


>sp|Y474_KORCO|UPF0310 protein Kcr_0474|Korarchaeum cryptofilum (strain OPF8)

Query: 2 ENWRIFREE 10
ENW I +E+
Sbjct: 11 ENWEIIKEK 19




42|Sequence|206|215|IFREEQNGED

>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IFREEQNGE 9
+FR+E+ GE
Sbjct: 382 VFRKEEEGE 390


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FREEQNGE 9
FR EQ GE
Sbjct: 315 FRHEQKGE 322


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 1 IFREEQNG 8
++REEQ G
Sbjct: 241 LYREEQKG 248


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 FREEQNGE 9
FR EQ GE
Sbjct: 319 FRHEQKGE 326


>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 FREEQNGE 9
FR EQ+GE
Sbjct: 317 FRREQSGE 324


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FREEQNGE 9
FR EQ GE
Sbjct: 316 FRHEQKGE 323


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 FREEQNGE 9
FR+EQ GE
Sbjct: 337 FRKEQRGE 344


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 FREEQNGE 9
FR EQ GE
Sbjct: 315 FRHEQRGE 322


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FREEQNGE 9
FR+EQ GE
Sbjct: 335 FRKEQRGE 342


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IFREEQNGE 9
++R+EQ GE
Sbjct: 361 VYRKEQRGE 369


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IFREEQNGE 9
++R+EQ GE
Sbjct: 361 VYRKEQRGE 369


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FREEQNGE 9
FR+EQ GE
Sbjct: 336 FRKEQRGE 343


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IFREEQNGE 9
++R+EQ GE
Sbjct: 361 VYRKEQRGE 369


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 FREEQNGE 9
FR+EQ GE
Sbjct: 336 FRKEQRGE 343


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IFREEQNGE 9
++R+EQ GE
Sbjct: 361 VYRKEQRGE 369


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IFREEQNGE 9
++R+EQ GE
Sbjct: 361 VYRKEQRGE 369


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FREEQNGE 9
FR+EQ GE
Sbjct: 336 FRKEQRGE 343


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 FREEQNGE 9
FR EQ GE
Sbjct: 322 FRREQRGE 329


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IFREEQNGE 9
++REE+N E
Sbjct: 555 LYREEENWE 563


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 FREEQNGE 9
FR EQ+GE
Sbjct: 323 FRREQSGE 330




43|Sequence|211|220|QNGEDEDGGW

>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QNGEDE 6
QNGEDE
Sbjct: 436 QNGEDE 441


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 NGEDEDGGW 10
N EDE GW
Sbjct: 58 NIEDEQKGW 66


>sp|PRIS_THEVO|DNA primase small subunit PriS|Thermoplasma volcanium (strain ATCC

Query: 1 QNGEDEDGGW 10
+ GE GGW
Sbjct: 189 KTGEKRPGGW 198


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QNGEDEDGGW 10
QN E+ GW
Sbjct: 701 QNAENRPAGW 710


>sp|TFE_HALWD|TRANSCRIPTION factor E|Haloquadratum walsbyi (strain DSM 16790

Query: 5 DEDGGW 10
DED GW
Sbjct: 72 DEDSGW 77


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GEDEDGGW 10
G D DG W
Sbjct: 521 GADGDGNW 528


>sp|DHQS_HALMA|3-DEHYDROQUINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QNGEDEDGGW 10
QNG DGG+
Sbjct: 104 QNGAAPDGGY 113


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 5 DEDGGW 10
DED GW
Sbjct: 72 DEDSGW 77


>sp|T1MH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 1 QNGEDED 7
++GEDED
Sbjct: 478 ESGEDED 484


>sp|TFE_NATPD|TRANSCRIPTION factor E|Natronomonas pharaonis (strain ATCC 35678

Query: 5 DEDGGW 10
DED GW
Sbjct: 72 DEDSGW 77


>sp|GATA_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Natronomonas pharaonis (strain ATCC

Query: 5 DEDGGW 10
DEDG W
Sbjct: 284 DEDGNW 289


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 5 DEDGGW 10
DED GW
Sbjct: 72 DEDSGW 77


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro

Query: 2 NGEDEDGG 9
NGE+ +GG
Sbjct: 55 NGENTNGG 62




44|Sequence|216|225|EDGGWRLAGS

>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EDGGWR 6
+DGGWR
Sbjct: 270 DDGGWR 275


>sp|NFI_ARCFU|ENDONUCLEASE V|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EDGGWRL 7
EDG WRL
Sbjct: 144 EDGLWRL 150


>sp|Y1488_ARCFU|UNCHARACTERIZED protein AF_1488|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EDGGWR 6
EDG WR
Sbjct: 142 EDGNWR 147


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EDGGWR 6
ED GWR
Sbjct: 270 EDNGWR 275


>sp|COFC_HALSA|2-PHOSPHO-L-LACTATE guanylyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GGWRLA 8
GGWRLA
Sbjct: 190 GGWRLA 195


>sp|COFC_HALS3|2-PHOSPHO-L-LACTATE guanylyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 3 GGWRLA 8
GGWRLA
Sbjct: 190 GGWRLA 195


>sp|DGGGP_METB6|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanoregula boonei (strain DSM 21154

Query: 3 GGWRLAG 9
GGW LAG
Sbjct: 222 GGWYLAG 228


>sp|PANB_HYPBU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 GGWRLAG 9
GG+RLAG
Sbjct: 152 GGYRLAG 158


>sp|GVPO2_HALSA|GAS vesicle protein O2|Halobacterium salinarum (strain ATCC 700922

Query: 2 DGGWRL 7
DGGWR+
Sbjct: 58 DGGWRI 63


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 4 GWRLA 8
GWRLA
Sbjct: 257 GWRLA 261


>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GWRLA 8
GWRLA
Sbjct: 257 GWRLA 261


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GGWRLA 8
GWRLA
Sbjct: 572 AGWRLA 577


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 2 DGGWRLAG 9
+ GWR+AG
Sbjct: 381 EKGWRIAG 388


>sp|RL32_PYRAE|LARGE ribosomal subunit protein eL32|Pyrobaculum aerophilum (strain

Query: 1 EDGGWR 6
ED GWR
Sbjct: 41 EDSGWR 46


>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EDGGW 5
E+GGW
Sbjct: 87 EEGGW 91


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EDGGW 5
E+GGW
Sbjct: 87 EEGGW 91


>sp|RL15_HALMA|LARGE ribosomal subunit protein uL15|Haloarcula marismortui (strain

Query: 1 EDGGWRL 7
EDGG+R+
Sbjct: 86 EDGGFRV 92


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 EDGGW 5
+DGGW
Sbjct: 208 DDGGW 212


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DGGWRL 7
DGGW++
Sbjct: 190 DGGWKV 195




45|Sequence|221|230|RLAGSRRDGE

***** No hits found ******


46|Sequence|226|235|RRDGERWRPH

>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 1 RRDGERWR 8
RR G RWR
Sbjct: 395 RRIGSRWR 402


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 1 RRDGERWR 8
RR G RWR
Sbjct: 395 RRVGSRWR 402


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RDGERWRPH 10
RD E W+ H
Sbjct: 22 RDAEEWKLH 30


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GERWRPH 10
G+RWR H
Sbjct: 216 GKRWRGH 222


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DGERWRPH 10
D E+WR H
Sbjct: 23 DAEQWRIH 30


>sp|IF2G_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 RRDGERWR 8
RR G RWR
Sbjct: 409 RRVGSRWR 416


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 1 RRDGERW 7
R DGE W
Sbjct: 321 RNDGENW 327


>sp|RS6E_METTH|SMALL ribosomal subunit protein eS6|Methanothermobacter

Query: 1 RRDGERWR 8
RRDGER R
Sbjct: 83 RRDGERRR 90


>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 1 RRDGERWR 8
R+ G RWR
Sbjct: 395 RKIGSRWR 402


>sp|IF2G_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 1 RRDGERWR 8
R+ G RWR
Sbjct: 395 RKIGSRWR 402


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7 /

Query: 1 RRDGERWR 8
R+ G RWR
Sbjct: 395 RKIGSRWR 402


>sp|IF2G_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6 /

Query: 1 RRDGERWR 8
R+ G RWR
Sbjct: 395 RKIGSRWR 402


>sp|IF2G_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5 /

Query: 1 RRDGERWR 8
R+ G RWR
Sbjct: 395 RKIGSRWR 402


>sp|MPTA_AERPE|GTP cyclohydrolase MptA|Aeropyrum pernix (strain ATCC 700893

Query: 1 RRDGERWR 8
R GERWR
Sbjct: 129 RSGGERWR 136


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RDGERWRPH 10
R RWRP+
Sbjct: 199 RAASRWRPY 207


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 5 ERWRPH 10
E W+PH
Sbjct: 230 ESWQPH 235


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 5 ERWRPH 10
E W+PH
Sbjct: 233 ESWQPH 238


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 5 ERWRPH 10
E W+PH
Sbjct: 231 ESWQPH 236


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 2 RDGERW 7
RDG RW
Sbjct: 151 RDGVRW 156


>sp|PURT_METMP|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 5 ERWRPH 10
E W+PH
Sbjct: 230 ESWQPH 235


>sp|Y2399_ARCFU|UNCHARACTERIZED tRNA/rRNA methyltransferase AF_2399|Archaeoglobus fulgidus

Query: 1 RRDGERW 7
R+DGER+
Sbjct: 47 RKDGERF 53


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 5 ERWRPH 10
E W+PH
Sbjct: 230 ESWQPH 235


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 5 ERWRPH 10
E W+PH
Sbjct: 230 ESWQPH 235


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 ERWRPH 10
ERW+P+
Sbjct: 114 ERWKPY 119


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 5 ERWRPH 10
ERWR H
Sbjct: 114 ERWRSH 119


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 1 RRDGERW 7
RR+G++W
Sbjct: 578 RREGKQW 584


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 2 RDGERWRP 9
RDG +W P
Sbjct: 251 RDGLQWVP 258


>sp|METE_PYRHO|METHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DGERWR 8
DGE WR
Sbjct: 62 DGEMWR 67


>sp|PURT_SULAC|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfolobus

Query: 4 GERWRP 9
GE+W P
Sbjct: 336 GEKWAP 341


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 RRDGERWR 8
R+ G RWR
Sbjct: 394 RQVGSRWR 401


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RRDGERWR 8
R+ G RWR
Sbjct: 395 RQIGSRWR 402


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 RRDGERWR 8
R+ G RWR
Sbjct: 394 RQVGSRWR 401


>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 RRDGERWR 8
R+ G RWR
Sbjct: 395 RQIGSRWR 402


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RDGERWRPH 10
+ RWRP+
Sbjct: 199 KAASRWRPY 207


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 ERWRPH 10
E+WR H
Sbjct: 18 EKWRSH 23


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 5 ERWRPH 10
E+WR H
Sbjct: 18 EKWRSH 23


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 5 ERWRPH 10
E+WR H
Sbjct: 18 EKWRSH 23


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 2 RDGERWR 8
R+GE WR
Sbjct: 324 REGELWR 330


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 RRDGERWR 8
R+ G RWR
Sbjct: 395 RQIGSRWR 402


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 2 RDGERWRP 9
R+G RW P
Sbjct: 126 RNGARWIP 133


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 DGERWR 8
DGE WR
Sbjct: 62 DGEMWR 67


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 GERWRPH 10
GER+ PH
Sbjct: 423 GERFYPH 429


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 4 GERWRPH 10
G RWRP
Sbjct: 77 GHRWRPE 83


>sp|FLPA_HALMA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloarcula marismortui (strain

Query: 1 RRDGE--RWRPH 10
R DG+ RW PH
Sbjct: 29 RTDGDWRRWDPH 40


>sp|THYX_THEKO|FLAVIN-DEPENDENT thymidylate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RRDGERWR 8
+R GE+W+
Sbjct: 233 KRTGEKWK 240




47|Sequence|231|240|RWRPHSPDGP

>sp|MTD_METKA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanopyrus

Query: 4 PHSPDG 9
PH+PDG
Sbjct: 265 PHAPDG 270


>sp|TAL_THEVO|PROBABLE transaldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WRPHSPDG 9
W+ SPDG
Sbjct: 212 WKKVSPDG 219


>sp|TAL_THEAC|PROBABLE transaldolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WRPHSPDG 9
W+ SPDG
Sbjct: 212 WKKVSPDG 219


>sp|TAL_PICTO|PROBABLE transaldolase|Picrophilus torridus (strain ATCC 700027

Query: 2 WRPHSPDG 9
W+ SPDG
Sbjct: 212 WKKVSPDG 219


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 4 PHSPDGP 10
PH PD P
Sbjct: 98 PHYPDVP 104


>sp|MSRA_METM7|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 2 WRPHSPDGP 10
W+ H P P
Sbjct: 77 WKNHDPTTP 85


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 WRPHSPDG 9
W+ SPDG
Sbjct: 160 WKIMSPDG 167


>sp|MTD_METJA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanocaldococcus

Query: 3 RPHSPDG 9
+PH P+G
Sbjct: 258 KPHHPEG 264


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 WRPHSPDG 9
WR +PDG
Sbjct: 173 WRILTPDG 180


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WRPHSPDG 9
WR +PDG
Sbjct: 172 WRILTPDG 179


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 RWRPHSPDGP 10
RWR ++ D P
Sbjct: 590 RWRNYNLDQP 599


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WRPHSPDG 9
WR +PDG
Sbjct: 173 WRILTPDG 180


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 WRPHSPDG 9
WR +PDG
Sbjct: 173 WRILTPDG 180


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 3 RPHSPDG 9
RP PDG
Sbjct: 89 RPEMPDG 95


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 3 RPHSPDG 9
RP PDG
Sbjct: 89 RPEMPDG 95


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC

Query: 2 WRPHSPDG 9
W+P SPD
Sbjct: 47 WQPISPDA 54


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 WRPHSPDG 9
+RP +PDG
Sbjct: 305 YRPCTPDG 312


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 WRPHSPDG 9
W H PDG
Sbjct: 308 WFYHRPDG 315


>sp|PURT_HALWD|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Haloquadratum walsbyi

Query: 2 WRPHS 6
W+PHS
Sbjct: 239 WQPHS 243




48|Sequence|236|245|SPDGPRSAGW

>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 2 PDGPRSAGW 10
PDGP SA W
Sbjct: 332 PDGPLSAAW 340


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DGPRSAGW 10
DGP+SA W
Sbjct: 281 DGPKSAVW 288


>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DGPRSAGW 10
DGP+SA W
Sbjct: 279 DGPQSAVW 286


>sp|OTC_PYRCJ|ORNITHINE carbamoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 DGPRSAGW 10
DGP+SA W
Sbjct: 279 DGPQSAVW 286


>sp|RIFK_CENSY|RIBOFLAVIN kinase|Cenarchaeum symbiosum (strain A)

Query: 3 DGPRSAGW 10
DG RS GW
Sbjct: 127 DGKRSYGW 134


>sp|Y1579_ARCFU|UNCHARACTERIZED protein AF_1579|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PRSAGW 10
PR AGW
Sbjct: 145 PRGAGW 150


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SPDGPRSAGW 10
SP GP GW
Sbjct: 194 SPWGPGRPGW 203


>sp|RS10_METTP|SMALL ribosomal subunit protein uS10|Methanothrix thermoacetophila

Query: 1 SPDGPRSAGW 10
SPDG SA W
Sbjct: 52 SPDGEGSATW 61


>sp|RS3A_DESA1|SMALL ribosomal subunit protein eS1|Desulfurococcus amylolyticus (strain

Query: 1 SPDGPRSA 8
SP+GP+ A
Sbjct: 195 SPEGPKPA 202


>sp|RS10_METLZ|SMALL ribosomal subunit protein uS10|Methanocorpusculum labreanum

Query: 1 SPDGPRSAGW 10
SPDG +A W
Sbjct: 52 SPDGEGTATW 61


>sp|RS10_METPE|SMALL ribosomal subunit protein uS10|Methanosphaerula palustris (strain

Query: 1 SPDGPRSAGW 10
SPDG +A W
Sbjct: 52 SPDGEGTATW 61


>sp|RS10_METHJ|SMALL ribosomal subunit protein uS10|Methanospirillum hungatei JF-1

Query: 1 SPDGPRSAGW 10
SPDG +A W
Sbjct: 52 SPDGEGTATW 61


>sp|OTC_CENSY|ORNITHINE carbamoyltransferase|Cenarchaeum symbiosum (strain A)

Query: 3 DGPRSAGW 10
DGP+SA W
Sbjct: 275 DGPQSAVW 282


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PDGPRSAG 9
PDGPR+
Sbjct: 379 PDGPRAGA 386


>sp|RS10_METMJ|SMALL ribosomal subunit protein uS10|Methanoculleus marisnigri (strain

Query: 1 SPDGPRSAGW 10
SPDG +A W
Sbjct: 52 SPDGEGTATW 61


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 SPDGPRSAGW 10
SP GP GW
Sbjct: 193 SPWGPGRPGW 202


>sp|RS10_METKA|SMALL ribosomal subunit protein uS10|Methanopyrus kandleri (strain AV19

Query: 1 SPDGPRSAGW 10
SPDG A W
Sbjct: 53 SPDGEGKATW 62


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PDGPRSAG 9
PDGPR+
Sbjct: 374 PDGPRAGA 381


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 SPDGP 5
SPDGP
Sbjct: 287 SPDGP 291


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 PDGPRSAG 9
PDGPR+
Sbjct: 378 PDGPRAGA 385


>sp|OTC_AERPE|ORNITHINE carbamoyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 DGPRSAGW 10
DGP SA W
Sbjct: 288 DGPWSAVW 295


>sp|RS10_METTH|SMALL ribosomal subunit protein uS10|Methanothermobacter

Query: 1 SPDGPRSAGW 10
SPDG +A W
Sbjct: 52 SPDGEGTATW 61


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SPDGP 5
SPDGP
Sbjct: 287 SPDGP 291


>sp|RS10_HALSA|SMALL ribosomal subunit protein uS10|Halobacterium salinarum (strain

Query: 1 SPDGPRSAGW 10
SPDG +A W
Sbjct: 52 SPDGEGTATW 61


>sp|RS10_HALS3|SMALL ribosomal subunit protein uS10|Halobacterium salinarum (strain

Query: 1 SPDGPRSAGW 10
SPDG +A W
Sbjct: 52 SPDGEGTATW 61


>sp|RS10_NATPD|SMALL ribosomal subunit protein uS10|Natronomonas pharaonis (strain

Query: 1 SPDGPRSAGW 10
SPDG +A W
Sbjct: 52 SPDGEGTATW 61


>sp|RS10_METS3|SMALL ribosomal subunit protein uS10|Methanobrevibacter smithii (strain

Query: 1 SPDGPRSAGW 10
SPDG A W
Sbjct: 52 SPDGEGKASW 61


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PDGPRSAGW 10
P+ PR GW
Sbjct: 63 PERPRDMGW 71


>sp|RS10_METST|SMALL ribosomal subunit protein uS10|Methanosphaera stadtmanae (strain

Query: 1 SPDGPRSAGW 10
SPDG A W
Sbjct: 52 SPDGEGKATW 61


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SPDGPRSAG 9
+PDGP G
Sbjct: 120 NPDGPLHVG 128


>sp|Y1427_HALMA|UNCHARACTERIZED protein rrnAC1427|Haloarcula marismortui (strain ATCC 43049

Query: 1 SPDGPRSA 8
SPDGP SA
Sbjct: 177 SPDGPPSA 184


>sp|P358_HALSA|PROTEIN VNG_0358C|Halobacterium salinarum (strain ATCC 700922

Query: 1 SPDGPR 6
+PDGPR
Sbjct: 52 TPDGPR 57


>sp|RS12_METJA|SMALL ribosomal subunit protein uS12|Methanocaldococcus jannaschii

Query: 2 PDGPRSAG 9
P GPR+ G
Sbjct: 111 PKGPRAKG 118


>sp|RS10_HALMA|SMALL ribosomal subunit protein uS10|Haloarcula marismortui (strain

Query: 1 SPDGPRSAGW 10
SPDG +A W
Sbjct: 53 SPDGEGTATW 62


>sp|RS10_HALWD|SMALL ribosomal subunit protein uS10|Haloquadratum walsbyi (strain DSM

Query: 1 SPDGPRSAGW 10
SPDG +A W
Sbjct: 52 SPDGEGTATW 61


>sp|RS10_HALLT|SMALL ribosomal subunit protein uS10|Halorubrum lacusprofundi (strain

Query: 1 SPDGPRSAGW 10
SPDG +A W
Sbjct: 52 SPDGEGTATW 61


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PDGPR 6
PDGPR
Sbjct: 235 PDGPR 239


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 1 SPDGPRS 7
SPD PRS
Sbjct: 355 SPDVPRS 361


>sp|PYRC_METKA|DIHYDROOROTASE kandleri (strain AV19 /

Query: 1 SPDGP 5
SPDGP
Sbjct: 171 SPDGP 175


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PDGPRSA 8
P+GPR+A
Sbjct: 511 PEGPRAA 517




49|Sequence|241|250|RSAGWREHME

>sp|PSTC_METJA|PROBABLE phosphate transport system permease|Methanocaldococcus jannaschii

Query: 5 WREHM 9
WREH+
Sbjct: 309 WREHV 313




50|Sequence|246|255|REHMERRRRF

>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 REHMERR 7
REH+ERR
Sbjct: 91 REHIERR 97


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EHMERRRR 9
E +ERRRR
Sbjct: 520 EELERRRR 527


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 REHMERRRR 9
+E +ERRR+
Sbjct: 519 QEELERRRK 527


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 REHMERRRR 9
+E +ERRR+
Sbjct: 519 QEELERRRK 527


>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 REHMERRRR 9
+EH ERR +
Sbjct: 351 KEHRERREK 359


>sp|HEM1_METKA|GLUTAMYL-TRNA reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 REHMERRRR 9
RE++ERRR+
Sbjct: 294 RENLERRRK 302


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 REHMERRRRF 10
+E +ER RRF
Sbjct: 62 KEEVERSRRF 71


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 REHMERRRR 9
+EH E+R++
Sbjct: 348 KEHQEKRKK 356




51|Sequence|251|260|RRRRFEFDFR

>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RRFEFD 8
RRF+FD
Sbjct: 398 RRFDFD 403


>sp|MFNA_METVS|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus vannielii

Query: 4 RFEFDF 9
R+EFDF
Sbjct: 214 RYEFDF 219


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RRRFEFDF 9
R RF+ DF
Sbjct: 39 RERFDIDF 46


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 2 RRRFEFDFR 10
RRR++ DF+
Sbjct: 219 RRRYKGDFK 227


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RRRRFEFDF 9
RR+R+ FD+
Sbjct: 306 RRQRYIFDY 314


>sp|Y1787_ARCFU|PUTATIVE HTH-type transcriptional regulatory protein|Archaeoglobus

Query: 4 RFEFDF 9
RF+FDF
Sbjct: 78 RFKFDF 83




52|Sequence|256|265|EFDFRDRDDE

>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FDFRDRDDE 10
F FRD DD+
Sbjct: 67 FRFRDEDDK 75


>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FDFRDRDDE 10
FD+RD DE
Sbjct: 90 FDYRDLSDE 98


>sp|NTPPA_THEGJ|DTTP/UTP pyrophosphatase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EFDFRDRDDE 10
E FR+ DDE
Sbjct: 117 EVKFRELDDE 126


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 2 FDFRDRDD 9
+ FRDRDD
Sbjct: 17 YIFRDRDD 24


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 2 FDFRDRDDE 10
F+F+++DDE
Sbjct: 140 FEFKNQDDE 148


>sp|RNZ_HALVD|RIBONUCLEASE Z|Haloferax volcanii (strain ATCC 29605

Query: 2 FDFRDRDDE 10
DF DRDD
Sbjct: 77 LDFNDRDDS 85




53|Sequence|261|270|DRDDERGYRR

>sp|COBS_HALWD|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DRDDERGYRR 10
D DDE RR
Sbjct: 92 DTDDEHSRRR 101


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DRDDERGYRR 10
D DERGY +
Sbjct: 858 DSFDERGYSK 867


>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 3 DDERGYRR 10
DDE+GY R
Sbjct: 391 DDEQGYGR 398


>sp|FOLD_NATPD|BIFUNCTIONAL protein FolD|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DRDDERGYR 9
D D+E+GY
Sbjct: 238 DADNEKGYE 246


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 DRDDERGY 8
D D E+GY
Sbjct: 238 DADTEKGY 245


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DDERGYR 9
DD+ GYR
Sbjct: 149 DDKNGYR 155


>sp|MTQ2_ARCFU|RELEASE factor glutamine methyltransferase Mtq2|Archaeoglobus fulgidus

Query: 1 DRDDERGYR 9
D DERG+R
Sbjct: 147 DLIDERGFR 155




54|Sequence|266|275|RGYRRVRSGS

>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YRRVRSGS 10
YR +RSG+
Sbjct: 209 YRNIRSGA 216


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RGYRRVRSG 9
RG RR+R+G
Sbjct: 442 RGTRRIRAG 450


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 1 RGYRRVRSG 9
R RR+RSG
Sbjct: 199 RELRRIRSG 207


>sp|PYRD_HALMA|DIHYDROOROTATE dehydrogenase (quinone)|Haloarcula marismortui (strain ATCC 43049

Query: 2 GYRRVRSGS 10
YR++R+G+
Sbjct: 298 AYRKIRAGA 306


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 GYRRVRSGS 10
GYR R G+
Sbjct: 20 GYREAREGN 28


>sp|ENDA_HALMA|TRNA-SPLICING endonuclease|Haloarcula marismortui (strain ATCC 43049

Query: 1 RGYRRVRSGS 10
RGY +VR+G
Sbjct: 24 RGYGKVRNGD 33




55|Sequence|271|280|VRSGSGSIDD

>sp|SYK2_METMA|LYSINE--TRNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SGSGSIDD 10
SGSG+ DD
Sbjct: 23 SGSGAFDD 30


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 1 VRSGSGSIDD 10
+R G+G ID+
Sbjct: 44 IRKGAGKIDE 53


>sp|GLKA_PYRHO|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus horikoshii (strain ATCC

Query: 1 VRSGSGSIDD 10
+R G GSI+D
Sbjct: 412 LRDGIGSIED 421


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 VRSGSGSIDD 10
V SG+G++DD
Sbjct: 2833 VYSGNGTVDD 2842


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 VRSGSGSIDD 10
VR+G+G IDD
Sbjct: 138 VRNGAGWIDD 147


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 VRSGSGSIDD 10
VR+G+G IDD
Sbjct: 138 VRNGAGWIDD 147


>sp|BACH_HALS4|HALORHODOPSIN sp. (strain arg-4)

Query: 2 RSGSGSIDD 10
RSG G+I D
Sbjct: 285 RSGRGAIGD 293


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 1 VRSGSGSIDD 10
++ G+G ID+
Sbjct: 44 IKKGAGKIDE 53


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VRSGSGSI 8
+RSGSG++
Sbjct: 147 IRSGSGTL 154


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 VRSGSGSIDD 10
+RSG G ID+
Sbjct: 51 MRSGQGIIDE 60




56|Sequence|276|285|GSIDDDRDSL

>sp|HTPX_PYRHO|PROTEASE HtpX homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GSIDDDRDS 9
G+ DD+RDS
Sbjct: 170 GAYDDERDS 178


>sp|HTPX_PYRAB|PROTEASE HtpX homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 GSIDDDRDS 9
G+ DD+RDS
Sbjct: 170 GAYDDERDS 178


>sp|HTPX_PYRFU|PROTEASE HtpX homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GSIDDDRD 8
G+ D+DRD
Sbjct: 170 GAYDEDRD 177


>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 3 IDDDRDSL 10
+DD+RD L
Sbjct: 478 VDDERDEL 485


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 3 IDDDRDSL 10
+DD+RD L
Sbjct: 481 VDDERDEL 488


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IDDDRDSL 10
+DD+RD L
Sbjct: 477 VDDERDEL 484


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 3 IDDDRDSL 10
+DD+RD L
Sbjct: 481 VDDERDEL 488


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 3 IDDDRDSL 10
IDDDRD
Sbjct: 262 IDDDRDDF 269


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSIDDDRDS 9
G++DD R+S
Sbjct: 319 GNVDDTRES 327


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 GSIDDDR 7
G+ID+DR
Sbjct: 18 GNIDEDR 24


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 GSIDDDRD 8
G+I++DRD
Sbjct: 271 GTINEDRD 278




57|Sequence|281|290|DRDSLPEWCL

>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 2 RDSLPEWC 9
RD L EWC
Sbjct: 247 RDELKEWC 254


>sp|RS15_METTP|SMALL ribosomal subunit protein uS15|Methanothrix thermoacetophila

Query: 3 DSLPEWC 9
D LPEWC
Sbjct: 20 DKLPEWC 26


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DSLPEWCL 10
DS+PEW +
Sbjct: 314 DSIPEWII 321


>sp|RS15_ARCFU|SMALL ribosomal subunit protein uS15|Archaeoglobus fulgidus (strain

Query: 2 RDSLPEW 8
RDS PEW
Sbjct: 19 RDSPPEW 25


>sp|ACYP_HALWD|ACYLPHOSPHATASE walsbyi (strain DSM 16790

Query: 3 DSLPEWC 9
DSL EWC
Sbjct: 58 DSLIEWC 64


>sp|DCDA_ARCFU|DIAMINOPIMELATE decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DRDSLPEWCL 10
++ LPEW L
Sbjct: 410 EKQRLPEWLL 419


>sp|PMDHS_METTP|PHOSPHOMEVALONATE dehydratase small subunit|Methanothrix thermoacetophila (strain DSM

Query: 3 DSLPEWCL 10
D +PEW L
Sbjct: 104 DRVPEWIL 111


>sp|RS13_METTP|SMALL ribosomal subunit protein uS13|Methanothrix thermoacetophila

Query: 2 RDSLPEWCL 10
RD++P W +
Sbjct: 78 RDNIPAWMM 86


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 2 RDSLPEW 8
RD+L EW
Sbjct: 265 RDTLTEW 271


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 3 DSLPEWCL 10
D+LP+W +
Sbjct: 464 DALPDWLI 471


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DRDSLPEWCL 10
DRD EW L
Sbjct: 123 DRDKEREWLL 132


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain ATCC

Query: 1 DRDSLPEWCL 10
DRD EW L
Sbjct: 123 DRDKEREWLL 132


>sp|RSGA_METMA|SMALL ribosomal subunit biogenesis GTPase|Methanosarcina mazei (strain

Query: 1 DRDSLPEW 8
D D++P W
Sbjct: 14 DNDTIPGW 21


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RDSLPEW 8
R+SLP W
Sbjct: 1095 RESLPLW 1101


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 3 DSLPEW 8
D+LP+W
Sbjct: 217 DTLPDW 222


>sp|KADA_THEVO|ADENYLATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 LPEWCL 10
LPEW L
Sbjct: 94 LPEWVL 99


>sp|KADA_THEAC|ADENYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 LPEWCL 10
LPEW L
Sbjct: 94 LPEWVL 99


>sp|KADA_METMJ|ADENYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 LPEWCL 10
LPEW L
Sbjct: 105 LPEWVL 110


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 3 DSLPEW 8
D+LP+W
Sbjct: 217 DTLPDW 222


>sp|RS13_ARCFU|SMALL ribosomal subunit protein uS13|Archaeoglobus fulgidus (strain

Query: 3 DSLPEWCL 10
+SLP W L
Sbjct: 70 ESLPSWLL 77


>sp|LIPA_PICTO|LIPOYL synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 DRDSLPE 7
DRD LP+
Sbjct: 103 DRDDLPD 109


>sp|LIPA_AERPE|LIPOYL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DRDSLPE 7
DRD LP+
Sbjct: 101 DRDDLPD 107


>sp|MUTL_HALSA|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 1 DRDSLPE 7
+RDSLP+
Sbjct: 454 ERDSLPD 460


>sp|MUTL_HALS3|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 1 DRDSLPE 7
+RDSLP+
Sbjct: 454 ERDSLPD 460


>sp|DTDA_THEVO|D-AMINOACYL-TRNA deacylase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DRDSLPEW 8
D D L EW
Sbjct: 205 DHDDLEEW 212


>sp|RS13_THEAC|SMALL ribosomal subunit protein uS13|Thermoplasma acidophilum (strain

Query: 5 LPEWCL 10
LPEW L
Sbjct: 97 LPEWLL 102


>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DRDSLPE 7
DRD LP+
Sbjct: 103 DRDDLPD 109


>sp|Y1152_METJA|UNCHARACTERIZED protein MJ1152|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DRDSLPEW 8
+ D LP+W
Sbjct: 25 EEDILPDW 32


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DRDSLPEW 8
D DSL EW
Sbjct: 112 DLDSLLEW 119


>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DRDSLPEW 8
DRD LP++
Sbjct: 108 DRDDLPDY 115


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC

Query: 2 RDSLPEW 8
RD+L EW
Sbjct: 23 RDALAEW 29


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 RDSLPEW 8
RD+L EW
Sbjct: 23 RDALAEW 29




58|Sequence|286|295|PEWCLEDAEE

>sp|RS15_METBF|SMALL ribosomal subunit protein uS15|Methanosarcina barkeri (strain

Query: 1 PEWCLEDAEE 10
PEWC AEE
Sbjct: 23 PEWCKIGAEE 32


>sp|RS15_METAC|SMALL ribosomal subunit protein uS15|Methanosarcina acetivorans (strain

Query: 1 PEWCLEDAEE 10
PEWC A+E
Sbjct: 23 PEWCKIGADE 32


>sp|RS15_METMA|SMALL ribosomal subunit protein uS15|Methanosarcina mazei (strain ATCC

Query: 1 PEWCLEDAEE 10
PEWC A+E
Sbjct: 23 PEWCKIGADE 32


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 4 CLEDAEE 10
CLEDA+E
Sbjct: 109 CLEDAKE 115


>sp|AGL12_HALVD|LOW-SALT glycan biosynthesis protein Agl12|Haloferax volcanii (strain ATCC

Query: 1 PEWCLEDAEE 10
PEW ED E
Sbjct: 290 PEWSFEDGLE 299


>sp|RL30E_PYRIL|LARGE ribosomal subunit protein eL30|Pyrobaculum islandicum (strain DSM

Query: 1 PEWCLEDAE 9
P+W ED E
Sbjct: 43 PKWAKEDVE 51


>sp|RS15_METVS|SMALL ribosomal subunit protein uS15|Methanococcus vannielii (strain

Query: 1 PEWCLEDAEE 10
PEW AEE
Sbjct: 23 PEWVSMSAEE 32


>sp|RS15_METM5|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain

Query: 1 PEWCLEDAEE 10
PEW AEE
Sbjct: 23 PEWVSMSAEE 32


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 4 CLEDAEE 10
CLEDA+E
Sbjct: 117 CLEDAKE 123


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 4 CLEDAEE 10
CLEDA+E
Sbjct: 121 CLEDAKE 127


>sp|TPIS_THEAC|TRIOSEPHOSPHATE isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 CLEDAEE 10
C+E+AEE
Sbjct: 116 CVENAEE 122


>sp|PRIS_PYRCJ|DNA primase small subunit PriS|Pyrobaculum calidifontis (strain DSM

Query: 4 CLEDAEE 10
CLEDA+E
Sbjct: 109 CLEDAKE 115


>sp|RNP4_METTH|RIBONUCLEASE P protein component 4|Methanothermobacter thermautotrophicus

Query: 1 PEWCLEDAEE 10
P W L+ AEE
Sbjct: 7 PRWMLKIAEE 16


>sp|Y045_METTH|MEMO1 family protein MTH_45|Methanothermobacter thermautotrophicus

Query: 2 EWCLE 6
EWC E
Sbjct: 24 EWCFE 28


>sp|TRM56_THEPD|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermofilum pendens (strain

Query: 1 PEWCLEDAE 9
P W E+A+
Sbjct: 120 PRWLFEEAD 128


>sp|RNZ_METKA|RIBONUCLEASE Z|Methanopyrus kandleri (strain AV19 /

Query: 2 EWCLEDAEE 10
E C ED EE
Sbjct: 209 EACFEDHEE 217


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 3 WCLEDAE 9
W L DAE
Sbjct: 8178 WALRDAE 8184


>sp|FAU1_PYRAR|PROBABLE ribonuclease FAU-1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PEWCLEDA 8
P WC E+
Sbjct: 432 PIWCTEEG 439


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain

Query: 4 CLEDAEE 10
CLEDA++
Sbjct: 71 CLEDADK 77


>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EWCLED 7
EWCL +
Sbjct: 218 EWCLRE 223


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 EWCLEDAE 9
EW L DAE
Sbjct: 356 EWDLTDAE 363


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM 12597

Query: 4 CLEDAEE 10
CL+DA+E
Sbjct: 119 CLDDAKE 125


>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 1 PEWCLED 7
P+W LED
Sbjct: 320 PKWFLED 326


>sp|TF2B1_THEVO|TRANSCRIPTION initiation factor IIB 1|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PEWCLEDAEE 10
PEW D+E+
Sbjct: 51 PEWRAFDSEQ 60


>sp|TF2B1_THEAC|TRANSCRIPTION initiation factor IIB 1|Thermoplasma acidophilum (strain ATCC

Query: 1 PEWCLEDAEE 10
PEW D+E+
Sbjct: 51 PEWRAFDSEQ 60


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EWCLEDAEE 10
EWC+E +E
Sbjct: 111 EWCVEHTDE 119




59|Sequence|291|300|EDAEEEMGTF

>sp|Y619_METMP|UPF0251 protein MMP0619|Methanococcus maripaludis (strain DSM 14266

Query: 1 EDAEEEMG 8
EDA +EMG
Sbjct: 57 EDAADEMG 64


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 1 EDAEEEMGTF 10
EDAE + GT+
Sbjct: 249 EDAEIKSGTY 258


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EDAEEEMG 8
E+AEE++G
Sbjct: 214 EEAEEDLG 221


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDAEEEMGT 9
ED E+E GT
Sbjct: 256 EDVEKEFGT 264




60|Sequence|296|305|EMGTFDSSGA

***** No hits found ******


61|Sequence|301|310|DSSGAFLSLK

>sp|RL2_PICTO|LARGE ribosomal subunit protein uL2|Picrophilus torridus (strain ATCC

Query: 2 SSGAFLSLK 10
S GA++SLK
Sbjct: 126 SHGAYVSLK 134




62|Sequence|306|315|FLSLKKVQKE

***** No hits found ******


63|Sequence|311|320|KVQKEPIPEE

>sp|Y540_ARCFU|UNCHARACTERIZED protein AF_0540|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KVQKEPIPEE 10
KV+K+P PEE
Sbjct: 81 KVEKDPNPEE 90


>sp|MTRA2_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter marburgensis

Query: 1 KVQKEPIPEE 10
KV K+P+PE+
Sbjct: 5 KVDKKPVPED 14


>sp|PYRB_CENSY|ASPARTATE carbamoyltransferase catalytic subunit|Cenarchaeum symbiosum

Query: 1 KVQKEPIPEE 10
++QKE P+E
Sbjct: 228 RIQKERFPDE 237


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 1 KVQKEPIPE 9
++QKE IP+
Sbjct: 229 RIQKERIPD 237


>sp|PYRB_HALLT|ASPARTATE carbamoyltransferase catalytic subunit|Halorubrum lacusprofundi

Query: 1 KVQKEPIPEE 10
++QKE P+E
Sbjct: 224 RIQKERFPDE 233


>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 EPIPEE 10
EPIPEE
Sbjct: 88 EPIPEE 93


>sp|PYRB_SULTO|ASPARTATE carbamoyltransferase catalytic subunit|Sulfurisphaera tokodaii

Query: 1 KVQKEPIPEE 10
++QKE P+E
Sbjct: 220 RIQKERFPDE 229


>sp|MTRA2_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter

Query: 2 VQKEPIPEE 10
V+K+P+PE+
Sbjct: 5 VEKKPVPED 13


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 1 KVQKEPIPEE 10
++QKE P+E
Sbjct: 229 RIQKERFPDE 238


>sp|PYRB_PYRAB|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus abyssi (strain

Query: 1 KVQKEPIPEE 10
++QKE P+E
Sbjct: 229 RIQKERFPDE 238


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 1 KVQKEPIPEE 10
++QKE P+E
Sbjct: 229 RIQKERFPDE 238


>sp|PYRB_NITMS|ASPARTATE carbamoyltransferase catalytic subunit|Nitrosopumilus maritimus

Query: 1 KVQKEPIPEE 10
++QKE P+E
Sbjct: 228 RIQKERFPDE 237




64|Sequence|316|325|PIPEEQEMDF

>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 PIPEEQEMD 9
P+PEE E+D
Sbjct: 784 PVPEELEVD 792


>sp|DAPF_METAR|DIAMINOPIMELATE epimerase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PIPEEQEMDF 10
P+PEE++ F
Sbjct: 25 PVPEEKKAAF 34


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 2 IPEEQEMDF 10
+PE Q+MDF
Sbjct: 117 LPEIQKMDF 125


>sp|TRPF_METJA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IPEEQEMDF 10
IP+++E+DF
Sbjct: 118 IPKDEEIDF 126


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 1 PIPEEQEMDF 10
P+P E+DF
Sbjct: 268 PLPRVDEIDF 277


>sp|RL3_METKA|LARGE ribosomal subunit protein uL3|Methanopyrus kandleri (strain AV19 /

Query: 2 IPEEQEMD 9
IPEE EMD
Sbjct: 109 IPEELEMD 116


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 PEEQEMDF 10
PEE++M+F
Sbjct: 365 PEEKDMNF 372


>sp|PCNA_METKA|DNA polymerase sliding clamp|Methanopyrus kandleri (strain AV19 /

Query: 2 IPEEQEMDF 10
IP+E E+DF
Sbjct: 124 IPDEPELDF 132


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 1 PIPEEQEMDF 10
P +E+EMDF
Sbjct: 213 PRIQEKEMDF 222


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PEEQEMDF 10
PE++E+DF
Sbjct: 190 PEKREIDF 197


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PEEQEMDF 10
P+EQ +DF
Sbjct: 181 PKEQHLDF 188


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IPEEQEMDF 10
IPEE DF
Sbjct: 468 IPEESRKDF 476


>sp|PYRH_THEKO|URIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IPEEQEMDF 10
+PE+ ++DF
Sbjct: 13 VPEDPDIDF 21


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 1 PIPEEQ 6
PIPE+Q
Sbjct: 111 PIPEDQ 116


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 1 PIPEEQ 6
PIPE+Q
Sbjct: 111 PIPEDQ 116


>sp|RS4E_AERPE|SMALL ribosomal subunit protein eS4|Aeropyrum pernix (strain ATCC 700893

Query: 1 PIPEEQ 6
PIPEE+
Sbjct: 114 PIPEEE 119


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 IPEEQEMDF 10
IPEE DF
Sbjct: 476 IPEETRKDF 484


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 1 PIPEEQEMDF 10
P+P E+DF
Sbjct: 265 PLPRVDEIDF 274


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IPEEQEMDF 10
+PE+ ++DF
Sbjct: 13 VPEKPDVDF 21




65|Sequence|321|330|QEMDFRPVDE

>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 QEMDFRPVDE 10
+++DF PVDE
Sbjct: 369 KDLDFTPVDE 378


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 MDFRPVDE 10
+DF PVDE
Sbjct: 15 LDFEPVDE 22


>sp|SYH_METMJ|HISTIDINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 QEMDFRP 7
QE+D+RP
Sbjct: 241 QEIDYRP 247


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 FRPVDE 10
FRPVD+
Sbjct: 632 FRPVDD 637


>sp|MOAA_META3|PROBABLE GTP 3',8-cyclase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QEMDFRPVDE 10
Q ++F PVDE
Sbjct: 182 QIIEFMPVDE 191


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QEMDFRPV 8
QE+ F+PV
Sbjct: 237 QELKFKPV 244


>sp|Y1739_ARCFU|UNCHARACTERIZED protein AF_1739|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QEMDFRPVD 9
+E+D+RP++
Sbjct: 116 KEIDYRPLN 124


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 1 QEMDFRPVDE 10
+E+DF+P +
Sbjct: 37 EEIDFKPAQD 46


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 QEMDFRPVDE 10
+E RP+DE
Sbjct: 17 EEFGIRPIDE 26


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 2 EMDFRPV 8
++DFRP+
Sbjct: 706 KLDFRPI 712




66|Sequence|326|335|RPVDEGEECS

>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PVDEGEECS 10
P++EG+ CS
Sbjct: 36 PINEGKNCS 44


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PVDEGEE 8
PVD+G+E
Sbjct: 337 PVDKGQE 343


>sp|MOAA_META3|PROBABLE GTP 3',8-cyclase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RPVDEGEECS 10
RP+D E CS
Sbjct: 237 RPMDNTEFCS 246


>sp|DTDA_HALMA|D-AMINOACYL-TRNA deacylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RPVDEG 6
RPVDEG
Sbjct: 300 RPVDEG 305


>sp|CDPAS_METBU|CDP-ARCHAEOL synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 RPVDEGEECS 10
RP+D G+ S
Sbjct: 18 RPIDNGKTMS 27


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 PVDEGEEC 9
PV+EG+ C
Sbjct: 38 PVNEGKTC 45


>sp|PRNK_PYRHO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PH0197|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RPVDEGEE 8
+P++EGE+
Sbjct: 239 KPIEEGEK 246


>sp|MOAA_METAR|PROBABLE GTP 3',8-cyclase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RPVDEGEEC 9
RP+D E C
Sbjct: 233 RPIDNSEFC 241


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PVDEGEEC 9
PV+EG+ C
Sbjct: 461 PVEEGKRC 468


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RPVDEGEEC 9
RP+D+G E
Sbjct: 93 RPIDDGPEI 101


>sp|RL10_METST|LARGE ribosomal subunit protein uL10|Methanosphaera stadtmanae (strain

Query: 3 VDEGEE 8
VDEGEE
Sbjct: 158 VDEGEE 163


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 2 PVDEGEECS 10
P++EG+ C+
Sbjct: 38 PINEGKLCA 46


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 1 RPVDEGEEC 9
RP GE+C
Sbjct: 265 RPALHGEQC 273


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RPVDEGEECS 10
RP+D E C+
Sbjct: 261 RPMDNSEFCA 270


>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RPVDEGEECS 10
RP+D E C+
Sbjct: 261 RPMDNSEFCA 270


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 DEGEEC 9
D GEEC
Sbjct: 166 DSGEEC 171


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 PVDEGEEC 9
PV+EG+ C
Sbjct: 39 PVNEGKVC 46




67|Sequence|331|340|GEECSDSEGS

>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GEECSDSEGS 10
G +C+D +GS
Sbjct: 101 GTKCTDEKGS 110


>sp|RS17_METBF|SMALL ribosomal subunit protein uS17|Methanosarcina barkeri (strain

Query: 2 EECSDS 7
EEC+DS
Sbjct: 14 EECNDS 19




68|Sequence|336|345|DSEGSHNEEA

>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 2 SEGSHNEEA 10
S G HN+EA
Sbjct: 29 SPGPHNKEA 37


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SEGSHNEE 9
SEGSH+ E
Sbjct: 189 SEGSHHPE 196


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 1 DSEGSHNEEA 10
D+ G H EE+
Sbjct: 189 DTAGRHKEES 198




69|Sequence|341|350|HNEEAKEPDK

>sp|Y1223_METJA|UNCHARACTERIZED protein MJ1223|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NEEAKEPD 9
NE+AK+P+
Sbjct: 85 NEKAKQPN 92


>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 1 HNEEAKEP 8
HN+E EP
Sbjct: 128 HNDEVVEP 135




70|Sequence|346|355|KEPDKTNKKE

>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 EPDKTNKKE 10
EP++TN KE
Sbjct: 202 EPNETNLKE 210


>sp|GGGPS_ARCFU|GERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EPDKTNKKE 10
+PD+TN E
Sbjct: 13 DPDRTNTDE 21


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 2 EPDKTNKKE 10
EP++TN KE
Sbjct: 202 EPNETNLKE 210




71|Sequence|351|360|TNKKEGEKTD

>sp|SYD_PYRAE|ASPARTATE--TRNA(ASP) ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TNKKEGEKTD 10
T +K+GEK++
Sbjct: 332 TKRKDGEKSE 341


>sp|PDAD_METJA|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NKKEGEKT 9
+KKE EKT
Sbjct: 115 SKKEAEKT 122


>sp|TRM5B_METJA|TRNA (guanine(37)-N(1))-methyltransferase Trm5b|Methanocaldococcus

Query: 1 TNKKEGEKT 9
NKK GE+T
Sbjct: 7 INKKHGEQT 15


>sp|MTMC1_METBA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina barkeri

Query: 2 NKKEGEKT 9
NKKEGE+
Sbjct: 86 NKKEGEEA 93




72|Sequence|356|365|GEKTDRVGVE

>sp|RL6_STAMF|LARGE ribosomal subunit protein uL6|Staphylothermus marinus (strain ATCC

Query: 1 GEKTDRVG 8
GEK+DR+
Sbjct: 118 GEKSDRIA 125


>sp|RL6_DESA1|LARGE ribosomal subunit protein uL6|Desulfurococcus amylolyticus (strain

Query: 1 GEKTDRVG 8
GEK+DR+
Sbjct: 118 GEKSDRIA 125


>sp|DPHB_HALSA|DIPHTHINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 EKTDRVGVE 10
E+ DR GVE
Sbjct: 55 ERRDRAGVE 63


>sp|DPHB_HALS3|DIPHTHINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 EKTDRVGVE 10
E+ DR GVE
Sbjct: 55 ERRDRAGVE 63


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 KTDRVGVE 10
K DR+GVE
Sbjct: 102 KYDRLGVE 109


>sp|Y1048_THEON|UPF0179 protein TON_1048|Thermococcus onnurineus (strain NA1)

Query: 1 GEKTDRVGVE 10
GEK R GVE
Sbjct: 13 GEKLARPGVE 22


>sp|PYRK_METAR|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocella arvoryzae

Query: 1 GEKTDRVGV 9
GEK R+GV
Sbjct: 111 GEKARRIGV 119


>sp|HEM3_SACS2|PROBABLE porphobilinogen deaminase|Saccharolobus solfataricus (strain ATCC

Query: 1 GEKTDRVGVE 10
GEK ++G+E
Sbjct: 21 GEKLRKIGIE 30




73|Sequence|361|370|RVGVEASEET

>sp|Y523_METJA|UNCHARACTERIZED protein MJ0523|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VGVEASEE 9
+GVE SEE
Sbjct: 165 IGVEISEE 172


>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 RVGVEASEET 10
RV VEA +ET
Sbjct: 418 RVRVEAKDET 427




74|Sequence|366|375|ASEETPQTSS

***** No hits found ******


75|Sequence|371|380|PQTSSSSARP

***** No hits found ******


76|Sequence|376|385|SSARPGTPSD

>sp|AMTAB_ARCFU|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Archaeoglobus

Query: 2 SARPGTPS 9
SAR GTP+
Sbjct: 324 SARKGTPA 331


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 2 SARPGTPS 9
+A PGTPS
Sbjct: 35 AAYPGTPS 42


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SARPGTPS 9
+A+PG PS
Sbjct: 184 AAKPGEPS 191


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 SARPGTPS 9
+A PGTPS
Sbjct: 38 AAYPGTPS 45


>sp|GATD_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 2 SARPGTP 8
S RPGTP
Sbjct: 52 SLRPGTP 58


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 2 SARPGTPS 9
+A PGTPS
Sbjct: 38 AAYPGTPS 45


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain

Query: 2 SARPGTPS 9
+A PGTPS
Sbjct: 38 AAYPGTPS 45


>sp|KDPC_HALSA|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 700922

Query: 4 RPGTPSD 10
RPG P D
Sbjct: 64 RPGQPED 70


>sp|KDPC_HALS3|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 29341

Query: 4 RPGTPSD 10
RPG P D
Sbjct: 64 RPGQPED 70


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 SSARPGTPSD 10
S+ +PG P D
Sbjct: 73 SNGKPGIPDD 82


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 4 RPGTPSD 10
+PGTP D
Sbjct: 220 KPGTPID 226


>sp|P538_METTH|PROTEIN MTH_538|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 RPGTPSD 10
RP TP D
Sbjct: 32 RPATPED 38


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 SSARPGTPS 9
+S PGTPS
Sbjct: 35 ASTYPGTPS 43


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter

Query: 1 SSARPGTPS 9
+S PGTPS
Sbjct: 35 ASTYPGTPS 43




77|Sequence|381|390|GTPSDHQSQE

>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM 21154

Query: 2 TPSDHQSQE 10
TP D QS++
Sbjct: 997 TPQDRQSRQ 1005


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GTPSDHQSQ 9
GTP H+S
Sbjct: 230 GTPMPHESH 238




78|Sequence|386|395|HQSQEASQFE

***** No hits found ******


79|Sequence|391|400|ASQFERKDEP

>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 2 SQFERKDEP 10
S F+RK+EP
Sbjct: 348 SSFDRKEEP 356


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ASQFERK 7
A QFERK
Sbjct: 410 AEQFERK 416




80|Sequence|396|405|RKDEPKTEQT

>sp|MCRC_METTM|METHYL-COENZYME M reductase I operon|Methanothermobacter marburgensis (strain ATCC

Query: 3 DEPKTEQT 10
DEPKT+ T
Sbjct: 158 DEPKTKGT 165


>sp|MCRC_METTH|METHYL-COENZYME M reductase I operon|Methanothermobacter thermautotrophicus (strain

Query: 3 DEPKTEQT 10
DEPKT+ T
Sbjct: 158 DEPKTKGT 165




81|Sequence|401|410|KTEQTEKAEE

>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 KTEQTEKAE 9
KTE+ EKAE
Sbjct: 1420 KTEKAEKAE 1428




82|Sequence|406|415|EKAEEETRME

***** No hits found ******


83|Sequence|411|420|ETRMENSLPA

>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 1 ETRMENSLP 9
E+R+ENS P
Sbjct: 91 ESRIENSQP 99


>sp|EF1B_NATPD|ELONGATION factor 1-beta|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ETRMENSLP 9
+ R+ENSLP
Sbjct: 23 QDRLENSLP 31


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ETRMENSLP 9
ET +EN+LP
Sbjct: 132 ETMIENNLP 140


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ETRMENSLP 9
ET +EN+LP
Sbjct: 132 ETMIENNLP 140


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ETRMENSLP 9
ET +EN+LP
Sbjct: 132 ETMIENNLP 140


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ETRMENSLP 9
ET +EN+LP
Sbjct: 132 ETMIENNLP 140


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ETRMENSLP 9
ET +EN+LP
Sbjct: 132 ETMIENNLP 140


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ETRMENSLP 9
ET +EN+LP
Sbjct: 132 ETMIENNLP 140


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 ETRMENSLP 9
ET +EN+LP
Sbjct: 132 ETMIENNLP 140


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 2 TRMENSLP 9
T++EN+LP
Sbjct: 423 TQVENTLP 430


>sp|IF2P_THEVO|PROBABLE translation initiation factor IF-2|Thermoplasma volcanium (strain

Query: 1 ETRMENSLPA 10
ET+ SLPA
Sbjct: 2 ETKSSTSLPA 11




84|Sequence|416|425|NSLPAKVPSR

>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 1 NSLPAKVPSR 10
++LPA VP+R
Sbjct: 213 SNLPAHVPAR 222


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 3 LPAKVPSR 10
LPAK+P R
Sbjct: 24 LPAKLPER 31


>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 1 NSLPAKVPSR 10
++LPA VP+R
Sbjct: 216 SNLPAHVPAR 225


>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 1 NSLPAKVPSR 10
NSL +++P R
Sbjct: 67 NSLDSEIPER 76


>sp|PUR2_THEGJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 NSLPAKVPSR 10
N +PA PSR
Sbjct: 86 NGIPAVGPSR 95


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 1 NSLPAKVP 8
NSLP VP
Sbjct: 189 NSLPVTVP 196




85|Sequence|421|430|KVPSRGDEMV

>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KVPSRGDE 8
K P+RGDE
Sbjct: 148 KKPARGDE 155


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VPSRGDE 8
VP+RGDE
Sbjct: 151 VPARGDE 157


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 KVPSRG 6
KVPSRG
Sbjct: 31 KVPSRG 36


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 1 KVPSRGDE 8
KVPS GD
Sbjct: 627 KVPSSGDH 634


>sp|NEP1_SACS2|RIBOSOMAL RNA small subunit methyltransferase|Saccharolobus solfataricus

Query: 1 KVPSRGDEMV 10
K+P GDE +
Sbjct: 119 KIPINGDETL 128


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KVPSRGDEMV 10
KVP GDE +
Sbjct: 244 KVPIMGDESI 253




86|Sequence|426|435|GDEMVADVQQ

>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GDEMVADVQQ 10
GDE+V D+++
Sbjct: 494 GDEIVIDIEK 503


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 GDEMVADVQQ 10
D M AD QQ
Sbjct: 114 ADNMTADAQQ 123


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GDEMVADVQQ 10
D M AD QQ
Sbjct: 111 ADNMTADAQQ 120


>sp|RL18_METM7|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain C7

Query: 1 GDEMVADVQQ 10
GDE++AD ++
Sbjct: 133 GDEIIADEER 142


>sp|RL18_METM6|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain C6

Query: 1 GDEMVADVQQ 10
GDE++AD ++
Sbjct: 133 GDEIIADEER 142


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GDEMVADVQQ 10
D M AD QQ
Sbjct: 113 ADNMTADAQQ 122


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 GDEMVADVQQ 10
D M AD QQ
Sbjct: 117 ADNMTADAQQ 126




87|Sequence|431|440|ADVQQPLSQI

>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DVQQPLSQI 10
++QQP+S I
Sbjct: 18 EIQQPVSPI 26




88|Sequence|436|445|PLSQIPSDTA

>sp|PFDB_SULAC|PREFOLDIN subunit beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LSQIPSDT 9
L Q+PSDT
Sbjct: 47 LKQLPSDT 54


>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PLSQIPSDT 9
PLS+IP T
Sbjct: 96 PLSEIPEGT 104


>sp|RL2_METTH|LARGE ribosomal subunit protein uL2|Methanothermobacter

Query: 1 PLSQIPSDT 9
PLS+IP T
Sbjct: 99 PLSEIPEGT 107


>sp|RL2_METST|LARGE ribosomal subunit protein uL2|Methanosphaera stadtmanae (strain

Query: 1 PLSQIPSDT 9
PLS+IP T
Sbjct: 99 PLSEIPEGT 107


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SQIPSDT 9
S IPSDT
Sbjct: 625 SSIPSDT 631


>sp|DUT_METKA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanopyrus

Query: 1 PLSQIPSDTA 10
P +IP DTA
Sbjct: 76 PELEIPEDTA 85


>sp|RL2_METAR|LARGE ribosomal subunit protein uL2|Methanocella arvoryzae (strain DSM

Query: 1 PLSQIPSDTA 10
PLS+IP A
Sbjct: 96 PLSEIPEGCA 105


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LSQIPSDT 9
LS++PS+T
Sbjct: 628 LSKVPSET 635




89|Sequence|441|450|PSDTASPLLI

>sp|SECY_HALMA|PROTEIN translocase subunit SecY|Haloarcula marismortui (strain ATCC

Query: 3 DTASPLLI 10
DTA PLL+
Sbjct: 5 DTAEPLLV 12




90|Sequence|446|455|SPLLILPPPV

>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 PLLILPPP 9
PLL++ PP
Sbjct: 40 PLLLMGPP 47


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 2 PLLILPPP 9
PLL++ PP
Sbjct: 40 PLLLVGPP 47


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 2 PLLILPPP 9
PLL++ PP
Sbjct: 40 PLLLVGPP 47


>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LLILPPPV 10
+L+LPPP+
Sbjct: 1 MLVLPPPL 8


>sp|SECD_METTH|PROTEIN-EXPORT membrane protein SecD|Methanothermobacter thermautotrophicus

Query: 1 SPLLILP 7
SP+L+LP
Sbjct: 263 SPILVLP 269




91|Sequence|451|460|LPPPVPNPSP

>sp|PUR7_ARCFU|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 LPPPVPN 7
LPPP+P+
Sbjct: 285 LPPPLPD 291


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LPPPVPNPS 9
+P PV NPS
Sbjct: 121 MPKPVTNPS 129


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PPPVPNP 8
PPP P P
Sbjct: 32 PPPYPAP 38


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 1 LPPPVPNPS 9
+P PV NPS
Sbjct: 135 VPSPVKNPS 143


>sp|UPPS_PYRAE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrobaculum

Query: 5 VPNPSP 10
+PNP P
Sbjct: 177 IPNPEP 182


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PPVPNPS 9
PPVP PS
Sbjct: 582 PPVPRPS 588


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPPPVPNPS 9
L PP PN S
Sbjct: 567 LIPPAPNHS 575


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 1 LPPPVPNPS 9
+PP P+PS
Sbjct: 428 VPPVEPDPS 436


>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 3 PPVPNPSP 10
PPVP P
Sbjct: 443 PPVPETPP 450


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 3 PPVPNP 8
PP+P+P
Sbjct: 48 PPLPDP 53


>sp|PSTB_PYRAE|PHOSPHATE import ATP-binding protein PstB|Pyrobaculum aerophilum (strain

Query: 1 LPPPVPNPS 9
+P P+PN S
Sbjct: 90 IPNPIPNLS 98


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 5 VPNPSP 10
VPNP+P
Sbjct: 320 VPNPNP 325


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 3 PPVPNPSP 10
P +PNP+P
Sbjct: 201 PFLPNPAP 208


>sp|Y1511_METMJ|UPF0316 protein Memar_1511|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LPPPVPNPSP 10
P VP P+P
Sbjct: 179 FPVTVPGPTP 188


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PVPNP 8
P+PNP
Sbjct: 354 PIPNP 358


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 2 PPPVPNPSP 10
P VP PSP
Sbjct: 353 PGQVPTPSP 361




92|Sequence|456|465|PNPSPTLRPV

>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NPSPTLRPV 10
+P P +RP+
Sbjct: 417 DPEPIVRPI 425


>sp|RN393_SACS2|CRISPR system ring nuclease SSO1393|Saccharolobus solfataricus (strain

Query: 1 PNPSPTLRP 9
P+P T+RP
Sbjct: 200 PSPPITIRP 208


>sp|TRPA_METM7|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C7 /

Query: 1 PNPSPTLR 8
PNP TL+
Sbjct: 15 PNPDATLK 22


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 1 PNPSPTLR 8
PNP TL+
Sbjct: 15 PNPDATLK 22


>sp|TRPA_METMP|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain DSM 14266

Query: 1 PNPSPTLR 8
PNP TL+
Sbjct: 15 PNPDATLK 22


>sp|TRPA_METM6|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C6 /

Query: 1 PNPSPTLR 8
PNP TL+
Sbjct: 15 PNPDATLK 22


>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 3 PSPTLRPV 10
P P LRP+
Sbjct: 272 PEPDLRPL 279




93|Sequence|461|470|TLRPVETPVV

>sp|AROE_METAR|SHIKIMATE dehydrogenase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 3 RPVETPVV 10
RPVETP++
Sbjct: 216 RPVETPLL 223


>sp|SAT_THEON|SULFATE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 TLRPVETPVV 10
TLRPVET V+
Sbjct: 166 TLRPVETRVL 175


>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 TLRPVETPVV 10
TLRP+ET V+
Sbjct: 166 TLRPIETRVL 175


>sp|SYH_PYRIL|HISTIDINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RPVETPVV 10
R VETPVV
Sbjct: 43 RRVETPVV 50


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 PVETPVV 10
PVETPV+
Sbjct: 249 PVETPVM 255


Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 433 RPIENPTV 440


>sp|SYH_PYRAR|HISTIDINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RPVETPVV 10
R VETPVV
Sbjct: 43 RRVETPVV 50


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 PVETPVV 10
PVETPV+
Sbjct: 249 PVETPVM 255


Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 433 RPIENPTV 440


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 PVETPVV 10
PVETPV+
Sbjct: 249 PVETPVM 255


Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 433 RPIENPTV 440


>sp|SYH_PYRCJ|HISTIDINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 RPVETPVV 10
R VETPVV
Sbjct: 43 RRVETPVV 50


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 PVETPVV 10
PVETPV+
Sbjct: 249 PVETPVM 255


Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 433 RPIENPTV 440


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 PVETPVV 10
PVETPV+
Sbjct: 249 PVETPVM 255


Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 433 RPIENPTV 440


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 PVETPVV 10
PVETPV+
Sbjct: 257 PVETPVM 263


Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 441 RPIENPTV 448


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RPVETPVV 10
R VETPVV
Sbjct: 43 RRVETPVV 50


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 PVETPVV 10
PVETPV+
Sbjct: 250 PVETPVM 256


Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 431 RPIENPTV 438


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 424 RPIENPTV 431


Query: 4 PVETPV 9
P+ETP+
Sbjct: 245 PIETPI 250


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 RPVETPVV 10
R VETPVV
Sbjct: 43 RRVETPVV 50


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRPVETP 8
++P+ETP
Sbjct: 531 IQPIETP 537


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 431 RPIENPTV 438


Query: 4 PVETPVV 10
PVETP++
Sbjct: 247 PVETPIM 253


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 2 LRPVETPV 9
+RPV+ PV
Sbjct: 521 MRPVDAPV 528


>sp|Y487_THEAC|PROTEIN Ta0487|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TLRPVETPV 9
+ RP+E PV
Sbjct: 122 SCRPIENPV 130


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 2 LRPVETPV 9
+RPV+ PV
Sbjct: 521 MRPVDAPV 528


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 PVETPVV 10
PVETPV+
Sbjct: 244 PVETPVM 250


Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 424 RPIENPTV 431


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 PVETPVV 10
PVETPV+
Sbjct: 248 PVETPVM 254


Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 428 RPIENPTV 435


>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RPVETPVV 10
RP E PVV
Sbjct: 316 RPFEPPVV 323


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PVETPVV 10
P+ETP V
Sbjct: 21 PIETPTV 27


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRPVETPV 9
+RPV+ PV
Sbjct: 359 IRPVDNPV 366


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 PVETPVV 10
PVETPV+
Sbjct: 245 PVETPVM 251


Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 425 RPIENPTV 432


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 PVETPVV 10
PVETPV+
Sbjct: 244 PVETPVM 250


Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 424 RPIENPTV 431


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 RPVETPVV 10
RP+E P V
Sbjct: 423 RPIENPTV 430


Query: 4 PVETPVV 10
PVETP++
Sbjct: 244 PVETPIM 250


>sp|MDH_THETK|MALATE dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 4 PVETPVV 10
PVE PVV
Sbjct: 261 PVEVPVV 267




94|Sequence|466|475|ETPVVGAPGM

>sp|KPTA_THEVO|PROBABLE RNA 2'-phosphotransferase|Thermoplasma volcanium (strain ATCC

Query: 1 ETPVVGAPG 9
E PV G PG
Sbjct: 15 ECPVCGKPG 23


>sp|KPTA_THEAC|PROBABLE RNA 2'-phosphotransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 ETPVVGAPG 9
E PV G PG
Sbjct: 15 ECPVCGKPG 23


>sp|FEN_SULAC|FLAP endonuclease 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PVVGAPG 9
PVV APG
Sbjct: 145 PVVQAPG 151


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ETPVVGAP 8
+ PVVG P
Sbjct: 102 DVPVVGGP 109


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ETPVVGAPG 9
E VVG PG
Sbjct: 369 EANVVGTPG 377


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 2 TPVVGAPGM 10
TPV+GA G+
Sbjct: 534 TPVIGAVGV 542


>sp|ACDD_METKA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanopyrus kandleri

Query: 1 ETPVVGAPG 9
+TP VG PG
Sbjct: 131 DTPDVGIPG 139


>sp|COFD_METBU|2-PHOSPHO-L-LACTATE transferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PVVGAPGM 10
P++ PGM
Sbjct: 200 PIISLPGM 207




95|Sequence|471|480|GAPGMGSVST

>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 1 GAPGMGSVS 9
GAPGMG +
Sbjct: 255 GAPGMGKTT 263


>sp|RS19_METJA|SMALL ribosomal subunit protein uS19|Methanocaldococcus jannaschii

Query: 1 GAPGMGSVST 10
GAPGMG+ +
Sbjct: 136 GAPGMGATRS 145


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 GAPGMGSVS 9
G+PGMG +
Sbjct: 257 GSPGMGKTT 265


>sp|HCGB_METJA|PYRIDINOL guanylyltransferase HcgB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GAPGMGSV 8
GAPG GS+
Sbjct: 106 GAPGSGSM 113


>sp|RS19_PYRHO|SMALL ribosomal subunit protein uS19|Pyrococcus horikoshii (strain ATCC

Query: 1 GAPGMGSVST 10
GAPG+G+ +
Sbjct: 116 GAPGIGATRS 125


>sp|RS19_PYRAB|SMALL ribosomal subunit protein uS19|Pyrococcus abyssi (strain GE5 /

Query: 1 GAPGMGSVST 10
GAPG+G+ +
Sbjct: 116 GAPGIGATRS 125


>sp|RS19_PYRFU|SMALL ribosomal subunit protein uS19|Pyrococcus furiosus (strain ATCC

Query: 1 GAPGMGSVST 10
GAPG+G+ +
Sbjct: 116 GAPGVGATRS 125


>sp|DPCKG_KORCO|GTP-DEPENDENT dephospho-CoA kinase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GAPGMGSVS 9
G PG+G VS
Sbjct: 137 GQPGVGMVS 145


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC

Query: 1 GAPGMGSVS 9
G+PG+G S
Sbjct: 44 GSPGIGKTS 52


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 GAPGMGSVS 9
G+PG+G S
Sbjct: 44 GSPGIGKTS 52


>sp|RS19_METM5|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C5

Query: 1 GAPGMGS 7
G+PGMG+
Sbjct: 145 GSPGMGA 151


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 1 GAPGMGSV 8
G PGMG+V
Sbjct: 183 GRPGMGAV 190


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 GAPGMGSVST 10
G PG+G +T
Sbjct: 50 GPPGVGKTTT 59


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GAPGMGSVS 9
GAPG+G S
Sbjct: 44 GAPGVGKTS 52


>sp|RS19_NITMS|SMALL ribosomal subunit protein uS19|Nitrosopumilus maritimus (strain

Query: 1 GAPGMGS 7
GAPG+G+
Sbjct: 115 GAPGVGA 121


>sp|RS19_METM7|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C7

Query: 1 GAPGMGS 7
G+PGMG+
Sbjct: 145 GSPGMGA 151


>sp|RS19_METVS|SMALL ribosomal subunit protein uS19|Methanococcus vannielii (strain ATCC

Query: 1 GAPGMGS 7
G+PGMG+
Sbjct: 144 GSPGMGA 150


>sp|RS19_METM6|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C6

Query: 1 GAPGMGS 7
G+PGMG+
Sbjct: 145 GSPGMGA 151


>sp|RS19_METMP|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 1 GAPGMGS 7
G+PGMG+
Sbjct: 145 GSPGMGA 151


>sp|RS19_META3|SMALL ribosomal subunit protein uS19|Methanococcus aeolicus (strain ATCC

Query: 1 GAPGMGS 7
G+PGMG+
Sbjct: 146 GSPGMGA 152


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 1 GAPGMGSV 8
G PGMG++
Sbjct: 90 GIPGMGNL 97


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 1 GAPGMGSV 8
G PG+G+V
Sbjct: 239 GGPGVGTV 246


>sp|PDXS_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Metallosphaera sedula (strain

Query: 1 GAPGMGSVS 9
G PG G+VS
Sbjct: 191 GEPGTGNVS 199


>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 GAPGMGSVST 10
G PG+G S+
Sbjct: 43 GKPGIGKTSS 52


>sp|MVP5K_THEAC|MEVALONATE-3-PHOSPHATE 5-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GAPGMGSVS 9
G PG+G S
Sbjct: 10 GVPGVGKTS 18


>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GAPGMGSVS 9
G+PG+G S
Sbjct: 44 GSPGVGKTS 52


>sp|RFCL_HALLT|REPLICATION factor C large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 1 GAPGMGSVS 9
G+PG+G S
Sbjct: 44 GSPGVGKTS 52


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 GAPGMGSVST 10
G PG+G S+
Sbjct: 43 GKPGIGKTSS 52


>sp|RS19_CENSY|SMALL ribosomal subunit protein uS19|Cenarchaeum symbiosum (strain A)

Query: 1 GAPGMGS 7
GAPG+G+
Sbjct: 115 GAPGVGA 121


>sp|RFCL_HALMA|REPLICATION factor C large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 GAPGMGSVS 9
G+PG+G S
Sbjct: 43 GSPGIGKTS 51




96|Sequence|476|485|GSVSTEPDDE

>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 1 GSVSTEPDDE 10
G +STE DDE
Sbjct: 171 GGISTELDDE 180


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 1 GSVSTEPDDE 10
G +STE DDE
Sbjct: 171 GGISTELDDE 180


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GSVSTEPDD 9
GSV +PD+
Sbjct: 93 GSVEVDPDE 101


>sp|FLAF_METJA|PUTATIVE flagella-related protein F|Methanocaldococcus jannaschii (strain

Query: 1 GSVSTEPD 8
GSV EPD
Sbjct: 73 GSVVVEPD 80


>sp|HYD1D_PYRFU|SULFHYDROGENASE 1 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GSVSTEPDDE 10
GSVSTE + E
Sbjct: 59 GSVSTEEEVE 68


>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 3 VSTEPD 8
VSTEPD
Sbjct: 193 VSTEPD 198




97|Sequence|481|490|EPDDEEGLKH

>sp|THS_METKA|THERMOSOME subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 EPDDEEGLK 9
+PDDEE LK
Sbjct: 149 DPDDEETLK 157


>sp|OGT_METMA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DEEGLKH 10
DE+GLKH
Sbjct: 18 DEKGLKH 24


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EPDDEEGL 8
EPD +EGL
Sbjct: 268 EPDIKEGL 275


>sp|THS2_HALVD|CHAPERONIN subunit CTT2|Haloferax volcanii (strain ATCC 29605

Query: 1 EPDDEEGLK 9
+PDDEE LK
Sbjct: 149 DPDDEELLK 157


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DDEEGLKH 10
+DEEGLK+
Sbjct: 476 NDEEGLKN 483


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DDEEGLKH 10
DDEEG+++
Sbjct: 650 DDEEGIRN 657


>sp|OGT_METAC|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DEEGLKH 10
DEEGLK+
Sbjct: 18 DEEGLKY 24


>sp|HEM1_THEAC|GLUTAMYL-TRNA reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 DEEGLKH 10
DEE +KH
Sbjct: 72 DEEAIKH 78


>sp|ISF1_METJA|IRON-SULFUR flavoprotein MJ0731|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DDEEGLK 9
+DEEGL+
Sbjct: 173 EDEEGLR 179


>sp|ECFA1_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 4 DEEGLKH 10
DEE +KH
Sbjct: 110 DEEAVKH 116


>sp|BIOW_METJA|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPDDEEGLK 9
EPD E G++
Sbjct: 127 EPDKERGVR 135


>sp|THSA_THEKO|CHAPERONIN subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EPDDEEGL 8
+PDDEE L
Sbjct: 147 DPDDEETL 154


>sp|THSA_THEK1|CHAPERONIN subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 1 EPDDEEGL 8
+PDDEE L
Sbjct: 147 DPDDEETL 154


>sp|Y086_METJA|UNCHARACTERIZED protein MJ0086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PDDEEGLK 9
PD EEG++
Sbjct: 275 PDKEEGIE 282


>sp|BIOW_METSF|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus sp. (strain FS406-22)

Query: 1 EPDDEEGLK 9
EPD E G++
Sbjct: 123 EPDKERGVR 131


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 2 PDDEEGL 8
PDDEE L
Sbjct: 148 PDDEETL 154


>sp|BIOW_META3|6-CARBOXYHEXANOATE--COA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EPDDEEGLK 9
EPD E G++
Sbjct: 126 EPDKERGVR 134


>sp|SERC_METAC|PHOSPHOSERINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PDDEEGL 8
PDD EG+
Sbjct: 156 PDDREGV 162




98|Sequence|486|495|EGLKHLEQQA

>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 2 GLKHLEQQA 10
G+ HL Q+A
Sbjct: 75 GIHHLSQEA 83




99|Sequence|491|500|LEQQAEKMVA

***** No hits found ******


100|Sequence|496|505|EKMVAYLQDS

>sp|TRUB_ARCFU|PROBABLE tRNA pseudouridine synthase B|Archaeoglobus fulgidus (strain ATCC

Query: 2 KMVAYLQDS 10
KMV +LQ+S
Sbjct: 85 KMVKFLQES 93




101|Sequence|501|510|YLQDSALDDE

>sp|Y088_METJA|UNCHARACTERIZED protein MJ0088|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLQDSALDD 9
YL+DS++D+
Sbjct: 146 YLKDSSIDE 154


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 YLQDSALDDE 10
YL++++++DE
Sbjct: 262 YLEENSMEDE 271


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 YLQDSALDDE 10
Y++++ L+DE
Sbjct: 257 YIEENGLEDE 266


>sp|HIS1_HALWD|ATP phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 YLQDSALDDE 10
YL+D+A+D E
Sbjct: 124 YLKDNAVDAE 133


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 YLQDSALDDE 10
YL++ LD+E
Sbjct: 242 YLEERGLDEE 251




102|Sequence|506|515|ALDDERLASK

>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DDERLASK 10
DD RLA+K
Sbjct: 362 DDARLANK 369


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ALDDER 6
ALDDER
Sbjct: 239 ALDDER 244


>sp|CDC6_METMJ|ORC1-TYPE DNA replication protein|Methanoculleus marisnigri (strain ATCC

Query: 2 LDDERL 7
LDDERL
Sbjct: 409 LDDERL 414




103|Sequence|511|520|RLASKLQEHR

>sp|MVP5K_THEAC|MEVALONATE-3-PHOSPHATE 5-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RLASKLQEHR 10
RLA+ L+E+R
Sbjct: 152 RLAAHLKEYR 161


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LASKLQEHR 10
+ASKLQE R
Sbjct: 551 IASKLQEIR 559


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 2 LASKLQEH 9
LASK++EH
Sbjct: 412 LASKVKEH 419


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 1 RLASKLQEHR 10
RLA K+++HR
Sbjct: 213 RLAEKVKKHR 222


>sp|RPO1C_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus abyssi (strain GE5 /

Query: 1 RLASKLQEHR 10
RLA K+++HR
Sbjct: 215 RLAEKVKKHR 224




104|Sequence|516|525|LQEHRAKGVS

>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LQEHRAKG 8
++EHRAKG
Sbjct: 283 VEEHRAKG 290


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LQEHRAKGVS 10
++ HRAKG S
Sbjct: 27 VKSHRAKGTS 36


>sp|NAT_SACS2|N-ALPHA-ACETYLTRANSFERASE solfataricus (strain ATCC 35092

Query: 1 LQEHRAKGVS 10
L+E+R KG++
Sbjct: 95 LEEYRRKGIA 104


>sp|NDK_SULAC|NUCLEOSIDE diphosphate kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QEHRAKG 8
QEH+ KG
Sbjct: 52 QEHKGKG 58




105|Sequence|521|530|AKGVSIPLMH

>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 5 SIPLMH 10
SIPLMH
Sbjct: 262 SIPLMH 267


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AKGVSIPLM 9
A+GVSIP +
Sbjct: 105 ARGVSIPAL 113


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 1 AKGVSIP 7
AKGV IP
Sbjct: 351 AKGVEIP 357


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AKGVSIP 7
AKGV IP
Sbjct: 352 AKGVEIP 358


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 AKGVSIP 7
AKGV IP
Sbjct: 350 AKGVEIP 356


>sp|SRP19_PYRCJ|SIGNAL recognition particle 19 kDa|Pyrobaculum calidifontis (strain DSM

Query: 1 AKGVSIP 7
AKGV++P
Sbjct: 27 AKGVAVP 33




106|Sequence|526|535|IPLMHEAMQK

>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PLMHEAMQK 10
PLM +AMQ+
Sbjct: 486 PLMPDAMQR 494


>sp|CUTB_SULAC|GLYCERALDEHYDE dehydrogenase medium chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IPLMHEAMQ 9
+PLMH A +
Sbjct: 90 VPLMHHATR 98


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PLMHEAM 8
PLMHE +
Sbjct: 261 PLMHETL 267


>sp|Y1094_METJA|UNCHARACTERIZED protein MJ1094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PLMHEAMQK 10
PL+HE ++K
Sbjct: 201 PLIHELIEK 209


>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 IPLMHEAMQK 10
IPLMH+ ++
Sbjct: 263 IPLMHDPKRR 272


>sp|AROE_PYRFU|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PLMHEAMQK 10
P+MH A+ K
Sbjct: 22 PIMHNALFK 30


>sp|COABC_METJA|COENZYME A biosynthesis bifunctional protein|Methanocaldococcus jannaschii

Query: 1 IPLMHEAM 8
+P MHE M
Sbjct: 135 VPAMHENM 142




107|Sequence|531|540|EAMQKWYYKD

>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 3 MQKWYYKD 10
M++W+Y D
Sbjct: 124 MREWWYDD 131


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 MQKWYYKD 10
M++W+Y D
Sbjct: 124 MREWWYDD 131


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EAMQKWY 7
EA+++WY
Sbjct: 273 EALEEWY 279


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 2 AMQKWYYKD 10
AMQ YY+D
Sbjct: 631 AMQLRYYRD 639


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 AMQKWYYKD 10
AMQ YY+D
Sbjct: 630 AMQLRYYRD 638


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 AMQKWYYKD 10
AMQ YY+D
Sbjct: 640 AMQLRYYRD 648


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EAMQKWYYK 9
EA WYYK
Sbjct: 1501 EAGSVWYYK 1509


Query: 6 WYYK 9
WYYK
Sbjct: 1839 WYYK 1842


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EAMQKWYYKD 10
EA+++W Y++
Sbjct: 28 EAVRRWGYRE 37


>sp|FPOI_METMA|F(420)H(2) dehydrogenase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EAMQKWYYKD 10
+ M KW +KD
Sbjct: 148 KGMVKWAHKD 157


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC

Query: 2 AMQKWY 7
AM+KW+
Sbjct: 9 AMEKWF 14


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KWYYKD 10
KWY+KD
Sbjct: 154 KWYFKD 159


>sp|Y600_METMP|PROBABLE minor pilin MMP0600|Methanococcus maripaludis (strain DSM 14266

Query: 6 WYYKD 10
WYY D
Sbjct: 95 WYYSD 99


>sp|DHYS1_METMA|PROBABLE deoxyhypusine synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AMQKWYYKD 10
+Q W YK+
Sbjct: 198 GLQAWLYKE 206


>sp|DHYS_METTE|PROBABLE deoxyhypusine synthase|Methanosarcina thermophila

Query: 2 AMQKWYYKD 10
+Q W YK+
Sbjct: 198 GLQAWLYKE 206


>sp|DHYS1_METAC|PROBABLE deoxyhypusine synthase 1|Methanosarcina acetivorans (strain ATCC

Query: 2 AMQKWYYKD 10
+Q W YK+
Sbjct: 198 GLQAWLYKE 206


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 2 AMQKWYYKD 10
M+K+YY+D
Sbjct: 11 GMEKYYYED 19


>sp|VORB_PYRHO|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus horikoshii (strain ATCC

Query: 1 EAMQKWYYKD 10
EA+QKW ++
Sbjct: 290 EALQKWVLEE 299


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 1 EAMQKWYYK 9
EAM+K Y K
Sbjct: 241 EAMEKGYIK 249


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 6 WYYKD 10
WYYK+
Sbjct: 1012 WYYKN 1016




108|Sequence|536|545|WYYKDPQGEI

>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 WYYKDPQGE 9
+YYKDP+G+
Sbjct: 162 FYYKDPEGK 170


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 WYYKDPQGEI 10
+Y+KDP+G +
Sbjct: 203 FYFKDPEGNV 212


>sp|ASD_METBU|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanococcoides

Query: 1 WYYKDP 6
W+++DP
Sbjct: 48 WFFRDP 53


>sp|RNP1_METTH|RIBONUCLEASE P protein component 1|Methanothermobacter thermautotrophicus

Query: 1 WYYKDPQGEI 10
++++ PQGE+
Sbjct: 61 FHFRTPQGEL 70


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 WYYKDPQGE 9
++++DP+GE
Sbjct: 484 YWFEDPEGE 492


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 WYYKDPQ 7
W Y++PQ
Sbjct: 106 WRYEEPQ 112


>sp|DPCKG_NATPD|GTP-DEPENDENT dephospho-CoA kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 KDPQGEI 10
KDP GEI
Sbjct: 17 KDPLGEI 23


>sp|CHEB_NATPD|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Natronomonas pharaonis

Query: 2 YYKDPQGEI 10
++K P GE+
Sbjct: 105 FFKKPSGEV 113


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 WYYKDPQGEI 10
W+Y P G I
Sbjct: 308 WFYHRPDGSI 317


>sp|RIBA_ARCFU|GTP cyclohydrolase-2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YKDPQGEI 10
YK P GEI
Sbjct: 206 YKTPLGEI 213


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 WYYKDPQGEI 10
+ +KDP+G +
Sbjct: 203 FIFKDPEGNV 212


>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WYYKDPQG 8
W Y++PQ
Sbjct: 109 WRYEEPQA 116


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 WYYKDPQGEI 10
+ +KDP+G +
Sbjct: 203 FIFKDPEGNV 212


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WYYKDPQGEI 10
+ +KDP+G +
Sbjct: 203 FIFKDPEGNV 212


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 WYYKDPQGEI 10
+ +KDP+G +
Sbjct: 203 FIFKDPEGNV 212


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 1 WYYKDPQGEI 10
+ +KDP+G +
Sbjct: 203 FIFKDPEGNV 212


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 1 WYYKDPQGEI 10
+ +KDP+G +
Sbjct: 203 FIFKDPEGNV 212


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 1 WYYKDPQGEI 10
+ +KDP+G +
Sbjct: 203 FIFKDPEGNV 212


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 WYYKDPQGEI 10
+ +KDP+G +
Sbjct: 203 FIFKDPEGNV 212


>sp|SYH_THEVO|HISTIDINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WYYKDPQG 8
W Y++PQ
Sbjct: 106 WRYEEPQA 113


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WYYKDPQ 7
W Y++PQ
Sbjct: 106 WRYEEPQ 112


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 WYYKDPQ 7
W Y++PQ
Sbjct: 106 WRYEEPQ 112


>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 WYYKDPQGEI 10
WY P+GE+
Sbjct: 166 WYILTPEGEL 175


>sp|ILVC_NATPD|KETOL-ACID reductoisomerase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 3 YKDPQGE 9
Y+DP GE
Sbjct: 155 YQDPSGE 161


>sp|SYT_THEKO|THREONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WYYKDPQGEI 10
WY P+GE+
Sbjct: 165 WYILTPEGEL 174


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WYYKDPQGEI 10
WY P+GE+
Sbjct: 165 WYILTPEGEL 174


>sp|SYT_PYRAB|THREONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 WYYKDPQGEI 10
WY P+GE+
Sbjct: 164 WYILTPEGEL 173


>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WYYKDP 6
+YY+DP
Sbjct: 120 YYYEDP 125


>sp|Y949_SULTO|UPF0201 protein STK_09490|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YKDPQGEI 10
YKDPQ I
Sbjct: 116 YKDPQALI 123


>sp|SYT_PYRHO|THREONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WYYKDPQGEI 10
WY P+GE+
Sbjct: 164 WYILTPEGEL 173


>sp|SYT_PYRFU|THREONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WYYKDPQGEI 10
WY P+GE+
Sbjct: 164 WYILTPEGEL 173


>sp|SYT_THESM|THREONINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 WYYKDPQGEI 10
WY P+GE+
Sbjct: 164 WYILTPEGEL 173


>sp|PURQ_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothrix thermoacetophila (strain DSM

Query: 3 YKDPQGEI 10
Y PQGEI
Sbjct: 185 YCSPQGEI 192


>sp|ASD_HALSA|PUTATIVE archaetidylserine decarboxylase proenzyme|Halobacterium salinarum

Query: 1 WYYKDP 6
W+++DP
Sbjct: 42 WFHRDP 47


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YYKDPQG 8
YY DP+G
Sbjct: 139 YYLDPEG 145


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 4 KDPQGEI 10
KDP GE+
Sbjct: 209 KDPYGEV 215


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 WYYKDPQGEI 10
W K P GE+
Sbjct: 1021 WNIKTPNGEV 1030


>sp|SYH_HALMA|HISTIDINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WYYKDPQ 7
W Y++PQ
Sbjct: 106 WRYEEPQ 112


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YYKDPQGEI 10
Y KDPQ I
Sbjct: 96 YIKDPQNFI 104


>sp|PYRF_HALMA|OROTIDINE 5'-phosphate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 2 YYKDPQG 8
+Y+DP G
Sbjct: 64 FYEDPDG 70


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YYKDPQGEI 10
YY+ P G+I
Sbjct: 197 YYESPWGKI 205


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 YYKDPQ 7
YY +PQ
Sbjct: 75 YYNEPQ 80


>sp|Y3591_METAC|PROTEIN MA_3591|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 KDPQGEI 10
K+P+GE+
Sbjct: 188 KEPEGEV 194


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DPQGEI 10
DP+GEI
Sbjct: 749 DPEGEI 754


>sp|Y136_ARCFU|UNCHARACTERIZED protein AF_0136|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WYYKDPQGEI 10
W+ K P EI
Sbjct: 93 WFLKKPFAEI 102


>sp|URIC_HALVD|URICASE volcanii (strain ATCC 29605

Query: 1 WYYKDPQ 7
W Y DP+
Sbjct: 204 WSYDDPE 210


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YYKDPQG 8
YY DP+G
Sbjct: 139 YYLDPEG 145


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YYKDP 6
YYKDP
Sbjct: 6 YYKDP 10


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YYKDPQGEI 10
YY+ P G+I
Sbjct: 197 YYESPWGKI 205


>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WYYKDP 6
YYKDP
Sbjct: 173 LYYKDP 178


>sp|PIMT1_METAC|PROTEIN-L-ISOASPARTATE O-methyltransferase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 KDPQGEI 10
KDP+G+I
Sbjct: 226 KDPEGKI 232




109|Sequence|541|550|PQGEIQGPFN

>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 4 EIQGPFN 10
EI+GPFN
Sbjct: 815 EIKGPFN 821


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 4 EIQGPFN 10
EI+GPFN
Sbjct: 801 EIKGPFN 807


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 4 EIQGPFN 10
EI+GPFN
Sbjct: 822 EIKGPFN 828


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 PQGEIQGP 8
P GEI GP
Sbjct: 374 PTGEIPGP 381


>sp|F16PA_METB6|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanoregula boonei (strain DSM 21154

Query: 1 PQGEIQGP 8
P+G+IQ P
Sbjct: 176 PEGKIQSP 183


>sp|ENDA_METMA|TRNA-SPLICING endonuclease|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PQGEIQGPF 9
P+GE+ PF
Sbjct: 169 PKGEMPEPF 177


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 5 IQGPFN 10
I+GPFN
Sbjct: 816 IKGPFN 821


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PQGEIQGPFN 10
P+GEI FN
Sbjct: 579 PEGEIVEKFN 588


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 5 IQGPFN 10
I+GPFN
Sbjct: 815 IKGPFN 820


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 5 IQGPFN 10
I+GPFN
Sbjct: 815 IKGPFN 820


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 5 IQGPFN 10
I+GPFN
Sbjct: 815 IKGPFN 820


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 5 IQGPFN 10
I+GPFN
Sbjct: 815 IKGPFN 820


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 5 IQGPFN 10
I+GPFN
Sbjct: 815 IKGPFN 820


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 5 IQGPFN 10
I+GPFN
Sbjct: 815 IKGPFN 820


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 5 IQGPFN 10
I+GPFN
Sbjct: 815 IKGPFN 820


>sp|FEN_META3|FLAP endonuclease 1|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 QGEIQGPFN 10
+GEI P+N
Sbjct: 51 KGEITSPYN 59




110|Sequence|546|555|QGPFNNQEMA

>sp|GLYA_ARCFU|SERINE hydroxymethyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PFNNQEMA 10
PFN++EM+
Sbjct: 154 PFNSEEMS 161


>sp|PURK_SACS2|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide synthase|Saccharolobus solfataricus (strain ATCC

Query: 2 GPFNNQEM 9
GP+NNQ +
Sbjct: 218 GPYNNQNI 225


>sp|Y500_AERPE|UPF0282 protein APE_0500.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 QGPFNNQEM 9
QGP NN+ +
Sbjct: 177 QGPGNNEAL 185


>sp|RRP4_THEKO|EXOSOME complex component Rrp4|Thermococcus kodakarensis (strain ATCC

Query: 1 QGPFNN 6
QGPF N
Sbjct: 20 QGPFKN 25


>sp|MTRH_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus vannielii (strain ATCC

Query: 2 GPFNNQEMA 10
GP +N E+A
Sbjct: 279 GPIDNAELA 287


>sp|MTRH_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain C5

Query: 2 GPFNNQEMA 10
GP +N E+A
Sbjct: 279 GPIDNAELA 287


>sp|MTRH_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain DSM

Query: 2 GPFNNQEMA 10
GP +N E+A
Sbjct: 279 GPIDNAELA 287


>sp|MTRH_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus aeolicus (strain ATCC

Query: 2 GPFNNQEMA 10
GP +N E+A
Sbjct: 279 GPIDNAELA 287


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 GPFNNQEMA 10
G FN +EM+
Sbjct: 1029 GKFNPEEMS 1037




111|Sequence|551|560|NQEMAEWFQA

>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 EMAEWFQ 9
E+AEWFQ
Sbjct: 262 ELAEWFQ 268


>sp|PORA_METJA|PYRUVATE synthase subunit PorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NQEMAEWFQ 9
N+E AEWF+
Sbjct: 243 NEEFAEWFK 251


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NQEMAEWF 8
N+E+AEW
Sbjct: 173 NEELAEWL 180


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 EMAEWF 8
E+AEWF
Sbjct: 262 ELAEWF 267


>sp|G1PDH_METB6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoregula boonei (strain DSM 21154

Query: 1 NQEMAEWF 8
NQE + WF
Sbjct: 228 NQEQSAWF 235


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 3 EMAEWFQA 10
EMAEW A
Sbjct: 187 EMAEWLDA 194


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NQEMAEWF 8
N+E+ +WF
Sbjct: 78 NEELHQWF 85


>sp|NFI_METKA|ENDONUCLEASE V|Methanopyrus kandleri (strain AV19 /

Query: 5 AEWFQA 10
AEWF+A
Sbjct: 4 AEWFEA 9


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QEMAEWFQA 10
+E+AEW A
Sbjct: 183 EELAEWLNA 191


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QEMAEWFQA 10
+E+AEW A
Sbjct: 183 EELAEWLDA 191


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EMAEWFQA 10
E+AEW A
Sbjct: 183 ELAEWLNA 190


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 2 QEMAEWFQA 10
+E+AEW A
Sbjct: 183 EELAEWLNA 191


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QEMAEWFQA 10
+E+AEW A
Sbjct: 183 EELAEWLNA 191


>sp|K6PF_THEKO|ADP-SPECIFIC phosphofructokinase|Thermococcus kodakarensis (strain ATCC

Query: 1 NQEMAEWFQA 10
N+E+ WF +
Sbjct: 82 NEELQAWFDS 91


>sp|RNZ_METAC|RIBONUCLEASE Z|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EMAEW 7
EMAEW
Sbjct: 234 EMAEW 238


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 2 QEMAEWFQA 10
+EMA+W A
Sbjct: 185 REMADWLGA 193


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 1 NQEMAEWFQA 10
N+E+ WF +
Sbjct: 82 NEELHTWFDS 91


>sp|NNRD_HALTV|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Haloterrigena turkmenica (strain

Query: 2 QEMAEWFQA 10
+EM+EW A
Sbjct: 87 REMSEWADA 95


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NQEMAEW 7
NQ++A+W
Sbjct: 233 NQQIAKW 239


>sp|KTHY_PYRHO|PROBABLE thymidylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 MAEWFQ 9
+AEWF+
Sbjct: 23 LAEWFE 28


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NQEMAEWF 8
N+E +WF
Sbjct: 744 NEEQIKWF 751


>sp|PTH_THEON|PEPTIDYL-TRNA hydrolase|Thermococcus onnurineus (strain NA1)

Query: 2 QEMAEWFQA 10
+E EWF+A
Sbjct: 38 KEKPEWFKA 46


>sp|RLMH_METTP|PUTATIVE ribosomal RNA large subunit|Methanothrix thermoacetophila (strain

Query: 1 NQEMAEWFQ 9
+QE+A W Q
Sbjct: 71 SQELALWLQ 79


>sp|PTH_THEKO|PEPTIDYL-TRNA hydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QEMAEWFQA 10
+E EWF+A
Sbjct: 38 KEKPEWFKA 46




112|Sequence|556|565|EWFQAGYFTM

>sp|GLPK_SACI7|GLYCEROL kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EWFQAGYFTM 10
+W +A YF M
Sbjct: 114 DWLKANYFKM 123


>sp|GLPK_SACI2|GLYCEROL kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EWFQAGYFTM 10
+W +A YF M
Sbjct: 114 DWLKANYFKM 123


>sp|GLPK1_SACS2|GLYCEROL kinase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EWFQAGYFTM 10
+W +A YF M
Sbjct: 114 DWLKANYFKM 123


>sp|DTDA_AERPE|D-AMINOACYL-TRNA deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EWFQAGYFTM 10
E F+AGY T+
Sbjct: 37 ECFKAGYLTI 46


>sp|GLPK_SACI6|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EWFQAGYFTM 10
+W +A YF M
Sbjct: 114 DWLKANYFKM 123


>sp|GLPK_SACI4|GLYCEROL kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EWFQAGYFTM 10
+W +A YF M
Sbjct: 114 DWLKANYFKM 123


>sp|GLPK_SACI3|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 EWFQAGYFTM 10
+W +A YF M
Sbjct: 114 DWLKANYFKM 123


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 EWFQAGYF 8
+W AGYF
Sbjct: 240 DWSSAGYF 247


>sp|DLYKI_THEX4|D-LYXOSE ketol-isomerase|Thermofilum sp. (strain ex4484_79)

Query: 2 WFQAG 6
WFQAG
Sbjct: 144 WFQAG 148


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 FQAGYF 8
F+AGYF
Sbjct: 358 FEAGYF 363


>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EWFQAGY 7
EW Q GY
Sbjct: 300 EWAQKGY 306


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 3 FQAGYFTM 10
FQAG F M
Sbjct: 448 FQAGLFDM 455


>sp|GGR2_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanopyrus kandleri (strain AV19 /

Query: 1 EWFQAGYF 8
E+F GYF
Sbjct: 195 EFFPGGYF 202


>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EWFQAGYFT 9
EW + G+FT
Sbjct: 130 EWVENGWFT 138




113|Sequence|561|570|GYFTMSLLVK

>sp|Y1073_CALMQ|UPF0173 metal-dependent hydrolase Cmaq_1073|Caldivirga maquilingensis

Query: 1 GYFTMS 6
GYFTMS
Sbjct: 161 GYFTMS 166




114|Sequence|566|575|SLLVKRACDE

>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VKRACDE 10
V+RACDE
Sbjct: 427 VRRACDE 433


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 3 LVKRACDE 10
LVKR CD+
Sbjct: 247 LVKRLCDK 254


>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 3 LVKRACDE 10
LVKR CD+
Sbjct: 247 LVKRLCDK 254


>sp|THI4_HALWD|THIAMINE thiazole synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SLLVKRACD 9
S L+K ACD
Sbjct: 116 SSLIKSACD 124


>sp|THI4_HALVD|THIAMINE thiazole synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 SLLVKRACD 9
S L+K ACD
Sbjct: 116 SALIKAACD 124


>sp|COBS1_ARCFU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SLLVKRACDE 10
SLLVKR +E
Sbjct: 186 SLLVKRYAEE 195


>sp|PSA_THEON|PROTEASOME subunit alpha|Thermococcus onnurineus (strain NA1)

Query: 1 SLLVKRACD 9
++LVK+ CD
Sbjct: 112 TVLVKKICD 120


>sp|PSA_THEKO|PROTEASOME subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SLLVKRACD 9
++LVK+ CD
Sbjct: 112 TVLVKKICD 120


>sp|PSA_THEGJ|PROTEASOME subunit alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SLLVKRACD 9
++LVK+ CD
Sbjct: 112 TVLVKKICD 120


>sp|PSA_THEK1|PROTEASOME subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 1 SLLVKRACD 9
++LVK+ CD
Sbjct: 112 TVLVKKICD 120


>sp|PSA_PYRFU|PROTEASOME subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SLLVKRACD 9
S++VK+ CD
Sbjct: 112 SVIVKKICD 120


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LVKRACDE 10
LVK AC E
Sbjct: 917 LVKEACKE 924


>sp|THI4_NATPD|THIAMINE thiazole synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SLLVKRACD 9
S L+K ACD
Sbjct: 117 SGLIKAACD 125


>sp|PSA_THESM|PROTEASOME subunit alpha|Thermococcus sibiricus (strain DSM 12597

Query: 1 SLLVKRACD 9
++LVK+ CD
Sbjct: 112 TVLVKKICD 120


>sp|THI4_HALMA|THIAMINE thiazole synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SLLVKRACD 9
S L+K ACD
Sbjct: 120 SGLIKAACD 128




115|Sequence|571|580|RACDESFQPL

>sp|HIS6_METLZ|IMIDAZOLE glycerol phosphate synthase subunit|Methanocorpusculum labreanum

Query: 1 RACDESFQPL 10
RA DE F PL
Sbjct: 69 RAADELFLPL 78


>sp|HIS6_METHJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanospirillum hungatei

Query: 1 RACDESFQPL 10
RA DE F PL
Sbjct: 69 RAADELFLPL 78


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RACDESFQ 8
RACDE+ +
Sbjct: 429 RACDEAIK 436


>sp|PGP_SULAC|PHOSPHOGLYCOLATE phosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RACDESFQP 9
+ CD SF P
Sbjct: 108 KVCDFSFYP 116


>sp|TRUA_METLZ|TRNA pseudouridine synthase A|Methanocorpusculum labreanum (strain ATCC

Query: 3 CDESFQPL 10
CD SF P+
Sbjct: 225 CDLSFTPM 232




116|Sequence|576|585|SFQPLGDIMK

>sp|FRHG_METVO|COENZYME F420 hydrogenase subunit gamma|Methanococcus voltae

Query: 1 SFQPLGDIMK 10
SF P+GD++K
Sbjct: 124 SFVPIGDVIK 133


>sp|IDI2_IGNH4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SFQPLGDI 8
SFQP GD+
Sbjct: 159 SFQPEGDV 166


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FQPLGDIMK 10
F+P DIMK
Sbjct: 186 FKPRDDIMK 194


>sp|MFNA_ARCFU|PROBABLE L-aspartate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SFQPLGDIM 9
SF+ +GDI+
Sbjct: 112 SFEKIGDIL 120


>sp|NADE_ARCFU|NH(3)-DEPENDENT NAD(+) synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FQPLGDIMK 10
F P+GD+ K
Sbjct: 153 FLPIGDLYK 161


>sp|PYRI_META3|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus aeolicus

Query: 5 LGDIMK 10
LGDIMK
Sbjct: 4 LGDIMK 9




117|Sequence|581|590|GDIMKMWGRV

>sp|THII_HALSA|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC

Query: 1 GDIMKMWGRV 10
GD+ + WGRV
Sbjct: 46 GDVEREWGRV 55


>sp|THII_HALS3|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GDIMKMWGRV 10
GD+ + WGRV
Sbjct: 46 GDVEREWGRV 55


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 1 GDIMKMWGRV 10
GD+ +WGR+
Sbjct: 24 GDVNLLWGRI 33


>sp|Y2048_ARCFU|UNCHARACTERIZED protein AF_2048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDIMKMWGRV 10
GD++K W RV
Sbjct: 206 GDVVKQWIRV 215


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 1 GDIMKMWGR 9
GDI K WG+
Sbjct: 225 GDIEKYWGK 233


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 1 GDIMKMW 7
GDI KMW
Sbjct: 340 GDIPKMW 346


>sp|Y1715_METAC|UPF0280 protein MA_1715|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GDIMKMWGRV 10
G+ + MWG+V
Sbjct: 228 GEYIGMWGKV 237


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 1 GDIMKMWGR 9
G+I+ MW R
Sbjct: 492 GEIVDMWSR 500


>sp|ILVC_METTP|KETOL-ACID reductoisomerase (NADP(+))|Methanothrix thermoacetophila (strain

Query: 1 GDIMKMWGRV 10
G +MKMW V
Sbjct: 242 GGLMKMWNSV 251


>sp|Y3697_METBF|UPF0280 protein Mbar_A3697|Methanosarcina barkeri (strain Fusaro /

Query: 1 GDIMKMWGRV 10
G+ + MWG+V
Sbjct: 228 GEYIGMWGQV 237


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDIMKMWGRV 10
G +MWGR+
Sbjct: 58 GTSAQMWGRI 67


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IMKMWGRV 10
I K WGRV
Sbjct: 317 ITKHWGRV 324


>sp|GUAA_AERPE|GMP synthase [glutamine-hydrolyzing]|Aeropyrum pernix (strain ATCC

Query: 4 MKMWGRV 10
M++WGRV
Sbjct: 161 MELWGRV 167


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 GDIMKMWGR 9
GDI + WG+
Sbjct: 223 GDIERFWGK 231


>sp|BGAL_PYRWO|BETA-GALACTOSIDASE woesei

Query: 1 GDIMKMW 7
GDI+ MW
Sbjct: 199 GDIVDMW 205


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDIMKMWGRV 10
GDI K GRV
Sbjct: 1107 GDIAKRIGRV 1116


>sp|PYRB_PYRIL|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum islandicum

Query: 1 GDIMKMWG 8
GD++ WG
Sbjct: 68 GDVIGFWG 75


>sp|PYRB_PYRAR|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum arsenaticum

Query: 1 GDIMKMWG 8
GD++ WG
Sbjct: 68 GDVIGFWG 75


>sp|TRMY_AERPE|TRNA (pseudouridine(54)-N(1))-methyltransferase|Aeropyrum pernix (strain

Query: 1 GDIMKMWGRV 10
GDI WG +
Sbjct: 119 GDISSHWGEM 128


>sp|PYRB_PYRNV|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum neutrophilum

Query: 1 GDIMKMWG 8
GD++ WG
Sbjct: 68 GDVIGFWG 75


>sp|AGOG_PYRAB|N-GLYCOSYLASE/DNA lyase|Pyrococcus abyssi (strain GE5 /

Query: 1 GDIMKMWGRV 10
GD+ +WG +
Sbjct: 122 GDMSSLWGSI 131


>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 5 KMWGRV 10
K WGRV
Sbjct: 216 KKWGRV 221


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 1 GDIMKMWGRV 10
GDI++ W ++
Sbjct: 138 GDIIEAWVKI 147


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 KMWGRV 10
K WGRV
Sbjct: 216 KKWGRV 221


>sp|GPMA_METVS|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC

Query: 4 MKMWGRV 10
MK WG+V
Sbjct: 85 MKEWGKV 91


>sp|SDO1_ARCFU|RIBOSOME maturation protein SDO1 homolog|Archaeoglobus fulgidus (strain ATCC

Query: 1 GDIMKMWGRV 10
GD+M + G+V
Sbjct: 211 GDLMDLLGKV 220


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDIMKMWG 8
GDIMK+ G
Sbjct: 13 GDIMKIRG 20


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 GDIMKMWGR 9
G++ +WGR
Sbjct: 224 GEVESVWGR 232


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 KMWGRV 10
K WGRV
Sbjct: 216 KKWGRV 221


>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GDIMKMWGRV 10
G +KM+GRV
Sbjct: 195 GVFLKMFGRV 204


>sp|ASPGP_THEKO|PLANT-TYPE L-asparaginase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GDIMKMWGRV 10
G +KM+GRV
Sbjct: 195 GVFLKMFGRV 204


>sp|ASPGP_PYRHO|PLANT-TYPE L-asparaginase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GDIMKMWGRV 10
G +KM+GRV
Sbjct: 194 GVFLKMFGRV 203


>sp|ASPGP_PYRAB|PLANT-TYPE L-asparaginase|Pyrococcus abyssi (strain GE5 /

Query: 1 GDIMKMWGRV 10
G +KM+GRV
Sbjct: 194 GVFLKMFGRV 203


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 GDIMKMWGRV 10
++MK+W ++
Sbjct: 28 AEMMKIWNKI 37


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 1 GDIMKMW 7
GD+MKM+
Sbjct: 167 GDLMKMF 173


>sp|RLME_THEAC|RIBOSOMAL RNA large subunit methyltransferase|Thermoplasma acidophilum

Query: 1 GDIMKMWG 8
GD +K WG
Sbjct: 159 GDFIKNWG 166


>sp|BACH_HALS4|HALORHODOPSIN sp. (strain arg-4)

Query: 2 DIMKMWGR 9
D++ WGR
Sbjct: 121 DVLSQWGR 128




118|Sequence|586|595|MWGRVPFSPG

>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 2 WGRVPFSPG 10
WG +P++PG
Sbjct: 33 WGHIPWTPG 41


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM

Query: 2 WGRVPFSPG 10
WG +P+S G
Sbjct: 33 WGHIPWSAG 41


>sp|Y1715_METAC|UPF0280 protein MA_1715|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MWGRVP 6
MWG+VP
Sbjct: 233 MWGKVP 238


>sp|Y3697_METBF|UPF0280 protein Mbar_A3697|Methanosarcina barkeri (strain Fusaro /

Query: 1 MWGRVP 6
MWG+VP
Sbjct: 233 MWGQVP 238


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WGRVPFSP 9
W ++PF P
Sbjct: 7 WVKIPFGP 14


>sp|MFNB_METTH|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 3 GRVPFSPG 10
G VP+ PG
Sbjct: 60 GDVPYKPG 67


>sp|MFNB_METS3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 GRVPFSPG 10
G VP+ PG
Sbjct: 60 GDVPYKPG 67


>sp|MFNB_METMP|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GRVPFSPG 10
G VP+ PG
Sbjct: 60 GDVPYKPG 67


>sp|MFNB_METM7|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 3 GRVPFSPG 10
G VP+ PG
Sbjct: 60 GDVPYKPG 67


>sp|MFNB_METM6|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 3 GRVPFSPG 10
G VP+ PG
Sbjct: 60 GDVPYKPG 67


>sp|MFNB_METM5|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 3 GRVPFSPG 10
G VP+ PG
Sbjct: 60 GDVPYKPG 67


>sp|MFNB_METKA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 GRVPFSPG 10
G VP+ PG
Sbjct: 62 GDVPYKPG 69


>sp|MFNB_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GRVPFSPG 10
G VP+ PG
Sbjct: 60 GDVPYKPG 67


>sp|MFNB_META3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GRVPFSPG 10
G VP+ PG
Sbjct: 60 GDVPYKPG 67


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 WGRVPFS 8
WG P+S
Sbjct: 316 WGETPYS 322


>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 MWGRVPFSP 9
+W V FSP
Sbjct: 103 VWDEVAFSP 111


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 2 WGRVPFSPG 10
WG +P++ G
Sbjct: 33 WGYIPWTAG 41


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 2 WGRVPFSPG 10
WG +P++ G
Sbjct: 33 WGYIPWTAG 41


>sp|RL10_METKA|LARGE ribosomal subunit protein uL10|Methanopyrus kandleri (strain AV19 /

Query: 3 GRVPFSPG 10
G PF PG
Sbjct: 138 GPTPFEPG 145


>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 2 WGRVPFSPG 10
WG +P++ G
Sbjct: 33 WGFIPWTEG 41


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 2 WGRVPF 7
W R+PF
Sbjct: 465 WSRIPF 470


>sp|PRIS_METB6|DNA primase small subunit PriS|Methanoregula boonei (strain DSM 21154

Query: 2 WGRVPFSPG 10
WG V F+PG
Sbjct: 33 WGFVLFNPG 41


>sp|AOX2_AERPE|HEME-COPPER oxidase subunit 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 MWGRVPFSPG 10
MW + P PG
Sbjct: 172 MWIKTPDEPG 181


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 5 VPFSPG 10
VPF+PG
Sbjct: 555 VPFTPG 560


>sp|TRPE2_HALSA|ANTHRANILATE synthase component 1 2|Halobacterium salinarum (strain ATCC 700922

Query: 4 RVPFSPG 10
R PF+PG
Sbjct: 146 REPFTPG 152




119|Sequence|591|600|PFSPGPAPPP

>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PFSPGPAPPP 10
P SPGP P P
Sbjct: 516 PLSPGPLPAP 525


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SPGPAPPP 10
+P PA PP
Sbjct: 517 TPAPATPP 524


>sp|SYT_THESM|THREONINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PFSPGPAPP 9
P+ P P PP
Sbjct: 607 PYKPRPLPP 615


>sp|Y042_THEAC|UPF0215 protein Ta0042|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PFSPGP 6
PF PGP
Sbjct: 16 PFEPGP 21


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FSPGPAPPP 10
F+P P PP
Sbjct: 98 FAPNPNGPP 106


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 1 PFSPGPAP 8
PF P PAP
Sbjct: 201 PFLPNPAP 208


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 FSPGPAPPP 10
SP APPP
Sbjct: 83 LSPNLAPPP 91


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FSPGPAPPP 10
FS GP PP
Sbjct: 332 FSGGPVNPP 340


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 FSPGPAPPP 10
F+P P PP
Sbjct: 108 FAPNPNGPP 116


>sp|TRPG_SACS2|ANTHRANILATE synthase component 2|Saccharolobus solfataricus (strain ATCC

Query: 3 SPGPAPP 9
SPGP P
Sbjct: 52 SPGPGTP 58


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 SPGPAPPP 10
+P PAP P
Sbjct: 153 NPTPAPEP 160


>sp|TRPG_ARCFU|ANTHRANILATE synthase component 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SPGPAPP 9
SPGP P
Sbjct: 47 SPGPGKP 53


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 FSPGPAPPP 10
F+P P PP
Sbjct: 105 FAPNPNGPP 113


>sp|RL10_THESM|LARGE ribosomal subunit protein uL10|Thermococcus sibiricus (strain DSM

Query: 1 PFSPGP 6
P SPGP
Sbjct: 129 PLSPGP 134


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 4 PGPAPPP 10
P PAP P
Sbjct: 306 PAPAPQP 312


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PFSPGPAPPP 10
PF+ G + PP
Sbjct: 230 PFAMGTSQPP 239


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PFSPGPAPP 9
P P P PP
Sbjct: 2 PILPSPNPP 10




120|Sequence|596|605|PAPPPHMGEL

>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 APPPHM 7
+PPPH+
Sbjct: 606 SPPPHI 611


>sp|GATA_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PAPPPHMGEL 10
P PP +GE+
Sbjct: 396 PIIPPKLGEV 405


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 3 PPPHMGE 9
PPPH+ +
Sbjct: 256 PPPHVAQ 262


>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 3 PPPHMG 8
PPPH G
Sbjct: 171 PPPHSG 176


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 PPPHMG 8
PPPH+
Sbjct: 200 PPPHVA 205


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 APPPHMGEL 10
+P PH+G +
Sbjct: 52 SPTPHIGTI 60


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 APPPHMGEL 10
+P PH+G +
Sbjct: 52 SPTPHIGTI 60


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 5 PHMGEL 10
PHMG L
Sbjct: 233 PHMGRL 238


>sp|Y1304_METJA|PUTATIVE toxin MJ1304|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPPHMGEL 10
P P+ GEL
Sbjct: 106 PEPYFGEL 113


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 PPHMG 8
PPH+G
Sbjct: 36 PPHLG 40


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 PAPPPHMGEL 10
P P PH+ +L
Sbjct: 45 PKPRPHVTDL 54


>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PAPPPHMGEL 10
P PPP + E+
Sbjct: 163 PVPPPAVLEI 172


>sp|RNFD_METAC|ION-TRANSLOCATING oxidoreductase complex subunit D|Methanosarcina acetivorans

Query: 2 APPPHM 7
+PPPH+
Sbjct: 7 SPPPHI 12


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 APPPHMGEL 10
PPPH G+L
Sbjct: 6 TPPPHGGKL 14


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PPPHMGEL 10
P P MG+L
Sbjct: 39 PSPEMGDL 46


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 3 PPPHM 7
PPPH+
Sbjct: 585 PPPHV 589


>sp|NNR_KORCO|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Korarchaeum cryptofilum (strain

Query: 5 PHMGEL 10
PH+GE+
Sbjct: 372 PHLGEM 377




121|Sequence|601|610|HMGELDQERL

>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 HMGELDQERL 10
HMG+LD E L
Sbjct: 287 HMGQLDPEVL 296


>sp|SDX_SULTO|SULREDOXIN tokodaii (strain DSM 16993

Query: 2 MGELDQERL 10
+G+LD+E+L
Sbjct: 50 LGKLDEEKL 58


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GELDQERL 10
EL+QERL
Sbjct: 318 AELEQERL 325


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GELDQERL 10
EL+QERL
Sbjct: 318 AELEQERL 325


>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 3 GELDQERL 10
GELDQE L
Sbjct: 135 GELDQEFL 142


>sp|IDI2_THEKO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 MGELDQERL 10
MGE D+E L
Sbjct: 1 MGEFDREEL 9


>sp|THPR_METJA|RNA 2',3'-cyclic phosphodiesterase|Methanocaldococcus jannaschii

Query: 2 MGELDQERL 10
+GE+D+E+L
Sbjct: 44 LGEVDEEKL 52


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 HMGELDQE 8
H GE++QE
Sbjct: 208 HTGEIEQE 215


>sp|PYRC_HALSA|DIHYDROOROTASE salinarum (strain ATCC 700922

Query: 1 HMGELDQERL 10
H GEL ER+
Sbjct: 326 HRGELSYERV 335


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 HMGELDQE 8
H GE++QE
Sbjct: 208 HTGEIEQE 215


>sp|AROD_METBF|3-DEHYDROQUINATE dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HMGELDQER 9
H+G+LD E+
Sbjct: 3 HIGQLDLEK 11


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MGELDQERL 10
MGEL ERL
Sbjct: 301 MGELRGERL 309




122|Sequence|606|615|DQERLTRQQE

>sp|GCH1_CALMQ|GTP cyclohydrolase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 QERLTRQ 8
QERLTRQ
Sbjct: 114 QERLTRQ 120


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 2 QERLTRQQ 9
QER+TR Q
Sbjct: 169 QERITRGQ 176


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DQERLTRQ 8
D ERLTR+
Sbjct: 325 DVERLTRE 332




123|Sequence|611|620|TRQQELTALY

***** No hits found ******


124|Sequence|616|625|LTALYQMQHL

>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 ALYQMQHL 10
A+Y MQHL
Sbjct: 748 AVYYMQHL 755


>sp|NIFB_METJA|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus jannaschii

Query: 1 LTALYQMQHL 10
L LY+M HL
Sbjct: 228 LIPLYKMSHL 237


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 2 TALYQMQH 9
TALY ++H
Sbjct: 96 TALYALRH 103


>sp|Y1061_METJA|UNCHARACTERIZED membrane protein MJ1061|Methanocaldococcus jannaschii (strain

Query: 2 TALYQMQH 9
TAL++++H
Sbjct: 47 TALFELEH 54




125|Sequence|621|630|QMQHLQYQQF

>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 QMQHLQY 7
++QHLQY
Sbjct: 187 RLQHLQY 193


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 2 MQHLQYQQF 10
++H+ Y+QF
Sbjct: 162 IEHIAYRQF 170


>sp|MRE11_HALVD|DNA double-strand break repair protein|Haloferax volcanii (strain

Query: 4 HLQYQQF 10
HL YQQ+
Sbjct: 11 HLGYQQY 17


>sp|MRE11_HALSA|DNA double-strand break repair protein|Halobacterium salinarum

Query: 4 HLQYQQF 10
HL YQQ+
Sbjct: 11 HLGYQQY 17


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 3 QHLQYQQF 10
++LQYQ F
Sbjct: 337 EYLQYQNF 344


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 HLQYQQ 9
HLQYQ+
Sbjct: 38 HLQYQR 43


>sp|CAS2_HALVD|CRISPR-ASSOCIATED endoribonuclease Cas2|Haloferax volcanii (strain ATCC 29605

Query: 1 QMQHLQYQQF 10
+++HLQY F
Sbjct: 24 RLEHLQYSVF 33




126|Sequence|626|635|QYQQFLIQQQ

***** No hits found ******


127|Sequence|631|640|LIQQQYAQVL

***** No hits found ******


128|Sequence|636|645|YAQVLAQQQK

***** No hits found ******


129|Sequence|641|650|AQQQKAALSS

***** No hits found ******


130|Sequence|646|655|AALSSQQQQQ

***** No hits found ******


131|Sequence|651|660|QQQQQLALLL

***** No hits found ******


132|Sequence|656|665|LALLLQQFQT

***** No hits found ******


133|Sequence|661|670|QQFQTLKMRI

***** No hits found ******


134|Sequence|666|675|LKMRISDQNI

>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KMRISDQN 9
KMRI D N
Sbjct: 397 KMRIEDNN 404


>sp|PRNK_PYRHO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PH0197|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LKMRISDQ 8
LK+R+SD+
Sbjct: 187 LKLRVSDK 194




135|Sequence|671|680|SDQNIIPSVT

>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DQNIIPSV 9
DQNI PSV
Sbjct: 115 DQNIHPSV 122


>sp|THSB_THEK8|CHAPERONIN subunit beta|Thermococcus sp. (strain KS-8)

Query: 2 DQNIIPSV 9
DQNI PS+
Sbjct: 116 DQNIHPSI 123


>sp|THSB_THEKO|CHAPERONIN subunit beta|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DQNIIPSV 9
DQNI PS+
Sbjct: 116 DQNIHPSI 123


>sp|THS_PYRAB|THERMOSOME subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 DQNIIPSV 9
DQNI PS+
Sbjct: 116 DQNIHPSI 123


>sp|THSB_THEK1|CHAPERONIN subunit beta|Thermococcus sp. (strain JCM 11816

Query: 2 DQNIIPSV 9
DQNI PS+
Sbjct: 116 DQNIHPSI 123


>sp|THS_PYRHO|THERMOSOME subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DQNIIPSV 9
DQNI PS+
Sbjct: 116 DQNIHPSI 123


>sp|THS_DESSY|THERMOSOME subunit|Desulfurococcus sp. (strain SY)

Query: 2 DQNIIPSV 9
DQNI PS+
Sbjct: 116 DQNIHPSI 123


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 2 DQNIIPSV 9
DQNI PS+
Sbjct: 116 DQNIHPSI 123


>sp|THSA_THEKO|CHAPERONIN subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DQNIIPSV 9
DQNI PS+
Sbjct: 116 DQNIHPSI 123


>sp|THSA_THEK1|CHAPERONIN subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 2 DQNIIPSV 9
DQNI PS+
Sbjct: 116 DQNIHPSI 123


>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain

Query: 1 SDQNIIP 7
S+QNIIP
Sbjct: 6 SNQNIIP 12


>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain

Query: 1 SDQNIIP 7
S+QNIIP
Sbjct: 6 SNQNIIP 12


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SDQNIIP 7
S+QNIIP
Sbjct: 6 SNQNIIP 12


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25

Query: 1 SDQNIIP 7
S+QNIIP
Sbjct: 6 SNQNIIP 12


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 1 SDQNIIP 7
S+QNIIP
Sbjct: 6 SNQNIIP 12


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15

Query: 1 SDQNIIP 7
S+QNIIP
Sbjct: 6 SNQNIIP 12


>sp|RRP42_SACS2|EXOSOME complex component Rrp42|Saccharolobus solfataricus (strain ATCC

Query: 1 SDQNIIP 7
S+QNIIP
Sbjct: 6 SNQNIIP 12


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 2 DQNIIPS 8
DQ+I+PS
Sbjct: 153 DQDIVPS 159


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DQNIIPSVT 10
D N+IPS T
Sbjct: 625 DTNLIPSDT 633




136|Sequence|676|685|IPSVTRSVSV

>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 PSVTRSVS 9
PSVTR+V+
Sbjct: 38 PSVTRAVA 45


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 PSVTRSVS 9
PSVTR+V+
Sbjct: 36 PSVTRAVA 43


>sp|GGGPS_METLZ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PSVTRSVS 9
P+VTR+VS
Sbjct: 167 PAVTRAVS 174


>sp|RFHPS_METTH|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanothermobacter thermautotrophicus

Query: 1 IPSVTRSVS 9
IP + RSVS
Sbjct: 193 IPEIDRSVS 201




137|Sequence|681|690|RSVSVPDTGS

>sp|SYFA_METMA|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RSVSVPDTGS 10
R+VS+ D GS
Sbjct: 179 RTVSITDAGS 188


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SVSVPDTG 9
+ SVPDTG
Sbjct: 329 AASVPDTG 336


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 3 VSVPDTG 9
VS+PDTG
Sbjct: 566 VSMPDTG 572


>sp|RL3_HALSA|LARGE ribosomal subunit protein uL3|Halobacterium salinarum (strain ATCC

Query: 1 RSVSVPDTG 9
R++SVPD G
Sbjct: 112 RTLSVPDEG 120


>sp|RL3_HALS3|LARGE ribosomal subunit protein uL3|Halobacterium salinarum (strain ATCC

Query: 1 RSVSVPDTG 9
R++SVPD G
Sbjct: 112 RTLSVPDEG 120


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 3 VSVPDTG 9
VS+P+TG
Sbjct: 91 VSIPETG 97


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 3 VSVPDTG 9
VS+P+TG
Sbjct: 91 VSIPETG 97


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 3 VSVPDTG 9
VS+P+TG
Sbjct: 91 VSIPETG 97


>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 3 VSVPDTG 9
VS+P+TG
Sbjct: 91 VSIPETG 97


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 1 RSVSVPD 7
RSV VPD
Sbjct: 29 RSVGVPD 35




138|Sequence|686|695|PDTGSIWELQ

>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GSIWEL 9
GS+WEL
Sbjct: 328 GSLWEL 333


>sp|PUR7_METTH|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PDTGSIWELQ 10
PDT +W+++
Sbjct: 198 PDTCRLWDME 207


>sp|Y1065_METJA|UNCHARACTERIZED protein MJ1065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DTGSIWE 8
D G IWE
Sbjct: 146 DIGEIWE 152


>sp|RFCL_THEAC|REPLICATION factor C large subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DTGSIWEL 9
DTG I+EL
Sbjct: 121 DTGGIYEL 128


>sp|HTAXP_HALS3|HEAT repeat-containing taxis protein OE_2401F|Halobacterium salinarum

Query: 1 PDTGSIW 7
PD+G+ W
Sbjct: 87 PDSGATW 93


>sp|PUR7_PYRFU|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PDTGSIWELQ 10
PDT W+++
Sbjct: 190 PDTCRFWDVE 199


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 PDTGSIWE 8
PD SIWE
Sbjct: 40 PDGYSIWE 47


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 3 TGSIWELQ 10
TG++W Q
Sbjct: 218 TGAVWAFQ 225


>sp|RFCL_THEVO|REPLICATION factor C large subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DTGSIWEL 9
DTG ++EL
Sbjct: 125 DTGGVYEL 132


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 3 TGSIWE 8
TG +WE
Sbjct: 211 TGKVWE 216


>sp|Y2167_ARCFU|UNCHARACTERIZED protein AF_2167|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PDTGSIW 7
PD G +W
Sbjct: 48 PDVGVVW 54


>sp|MTNA_METTH|PUTATIVE methylthioribose-1-phosphate isomerase|Methanothermobacter

Query: 5 SIWELQ 10
S+WE+Q
Sbjct: 179 SVWEMQ 184


>sp|CAS1C_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DTGSIW 7
DTG IW
Sbjct: 157 DTGVIW 162


>sp|RL15E_HALSA|LARGE ribosomal subunit protein eL15|Halobacterium salinarum (strain

Query: 1 PDTGSIWELQ 10
PD G + ELQ
Sbjct: 16 PDDGKLAELQ 25


>sp|RL15E_HALS3|LARGE ribosomal subunit protein eL15|Halobacterium salinarum (strain

Query: 1 PDTGSIWELQ 10
PD G + ELQ
Sbjct: 16 PDDGKLAELQ 25


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 GSIWE 8
GSIWE
Sbjct: 199 GSIWE 203


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GSIWEL 9
GS+W+L
Sbjct: 91 GSVWDL 96




139|Sequence|691|700|IWELQPTASQ

>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 WELQPTAS 9
WE +PTAS
Sbjct: 117 WEFKPTAS 124


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 IWELQPTASQ 10
+WE +PT S+
Sbjct: 116 VWEFKPTVSK 125


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 WELQPTASQ 10
WE +PT S+
Sbjct: 125 WEFEPTVSE 133


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 2 WELQPTASQ 10
WE +PT S+
Sbjct: 126 WEFEPTVSE 134


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain

Query: 2 WELQP 6
WE+QP
Sbjct: 52 WEIQP 56


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 IWELQP 6
IWEL P
Sbjct: 328 IWELMP 333


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 2 WELQPTASQ 10
WEL+P +++
Sbjct: 360 WELKPYSAE 368


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 2 WELQPTAS 9
W+ +PTA+
Sbjct: 118 WDFEPTAA 125


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 2 WELQPTAS 9
W+ +PTA+
Sbjct: 118 WDFEPTAA 125


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 IWELQPTASQ 10
+WE +P A +
Sbjct: 116 LWEFKPVAKK 125


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 IWELQPTASQ 10
+WE +P A +
Sbjct: 116 LWEFKPVAKK 125


>sp|IF1A_METS5|TRANSLATION initiation factor 1A|Metallosphaera sedula (strain ATCC 51363

Query: 2 WELQPTAS 9
W+ QPT +
Sbjct: 71 WDFQPTKA 78




140|Sequence|696|705|PTASQPTVWE

>sp|ILVC_PYRAR|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum arsenaticum (strain DSM

Query: 1 PTASQPTVWE 10
P QP VWE
Sbjct: 82 PDMEQPKVWE 91


>sp|Y762_METJA|UNCHARACTERIZED transporter MJ0762|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTASQPTVW 9
P+A PTVW
Sbjct: 205 PSAMAPTVW 213


>sp|ILVC_PYRIL|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum islandicum (strain DSM

Query: 1 PTASQPTVWE 10
P QP VW+
Sbjct: 82 PDMEQPKVWQ 91


>sp|Y576_METJA|UNCHARACTERIZED transporter MJ0576|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTASQPTVW 9
P+A PTVW
Sbjct: 212 PSAMAPTVW 220


>sp|ILVC_PYRNV|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum neutrophilum (strain DSM

Query: 1 PTASQPTVWE 10
P QP VW+
Sbjct: 82 PDMEQPKVWQ 91


>sp|ILVC_PYRAE|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum aerophilum (strain ATCC

Query: 1 PTASQPTVWE 10
P QP VW+
Sbjct: 82 PDMEQPKVWQ 91


>sp|COBD_METJA|PROBABLE cobalamin biosynthesis protein CobD|Methanocaldococcus jannaschii

Query: 1 PTASQPTVW 9
P + PTVW
Sbjct: 21 PESIHPTVW 29


>sp|AGCS_METMP|SODIUM/ALANINE symporter AgcS|Methanococcus maripaludis (strain DSM 14266

Query: 2 TASQPTVW 9
TAS P VW
Sbjct: 403 TASLPLVW 410


>sp|TRPF_METMP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 2 TASQPTVWE 10
TAS +VWE
Sbjct: 57 TASDVSVWE 65


>sp|COBD_META3|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus aeolicus

Query: 1 PTASQPTVW 9
P PTVW
Sbjct: 21 PEKIHPTVW 29


>sp|ILVC_PYRCJ|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum calidifontis (strain DSM

Query: 1 PTASQPTVW 9
P QP VW
Sbjct: 82 PDMEQPHVW 90


>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PTASQPTVWE 10
PT PT +E
Sbjct: 209 PTVKDPTTFE 218


>sp|Y1001_ARCFU|UNCHARACTERIZED protein AF_1001|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ASQPTVWE 10
ASQ VWE
Sbjct: 161 ASQGNVWE 168


>sp|WTPB_ARCFU|MOLYBDATE/TUNGSTATE transport system permease protein|Archaeoglobus fulgidus (strain

Query: 3 ASQPTVWE 10
AS P VW+
Sbjct: 42 ASDPAVWK 49


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PTASQPTVWE 10
PT + VWE
Sbjct: 106 PTLDRKKVWE 115


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PTASQPTVWE 10
P QP VW+
Sbjct: 606 PEKLQPEVWD 615




141|Sequence|701|710|PTVWEGGSVW

>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VWE---GGSVW 10
+WE GGSVW
Sbjct: 84 IWEFKAGGSVW 94


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VWEGGSVW 10
+W+GG W
Sbjct: 939 IWKGGMKW 946


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PTVWEG 6
PTVW G
Sbjct: 269 PTVWRG 274


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 PTVWEG 6
PTVW G
Sbjct: 269 PTVWRG 274


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 1 PTVWEG 6
PT+W G
Sbjct: 268 PTIWHG 273


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 2 TVWEGGSVW 10
+ W G VW
Sbjct: 260 STWTAGPVW 268


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 TVWEGGSV 9
T W GGSV
Sbjct: 147 TKWYGGSV 154


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 VWEGG 7
+WEGG
Sbjct: 193 IWEGG 197


>sp|SURE2_PYRAE|5'-NUCLEOTIDASE SurE 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PTVWEGG 7
P+VW+GG
Sbjct: 159 PSVWKGG 165


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TVWEGG 7
++WEGG
Sbjct: 185 SIWEGG 190


>sp|COBD_METJA|PROBABLE cobalamin biosynthesis protein CobD|Methanocaldococcus jannaschii

Query: 1 PTVWEG 6
PTVW G
Sbjct: 26 PTVWIG 31


>sp|COBD_META3|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus aeolicus

Query: 1 PTVWEG 6
PTVW G
Sbjct: 26 PTVWIG 31


>sp|COBD_METTH|PROBABLE cobalamin biosynthesis protein CobD|Methanothermobacter

Query: 1 PTVWEGGSV 9
P VW G +V
Sbjct: 26 PVVWMGSAV 34


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WEGGSVW 10
W G VW
Sbjct: 316 WRGTDVW 322


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 VWEGG 7
+WEGG
Sbjct: 185 IWEGG 189


>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TVWEGGSVW 10
T W GG V+
Sbjct: 147 TKWYGGEVY 155


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 TVWEGG 7
++WEGG
Sbjct: 185 SMWEGG 190


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 TVWEGG 7
++WEGG
Sbjct: 185 SMWEGG 190


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 TVWEGG 7
++WEGG
Sbjct: 190 SMWEGG 195


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EGGSVW 10
E GSVW
Sbjct: 1501 EAGSVW 1506


>sp|RL31_METMJ|LARGE ribosomal subunit protein eL31|Methanoculleus marisnigri (strain

Query: 3 VWEGGS 8
VWE GS
Sbjct: 56 VWENGS 61


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 TVWEGG 7
++WEGG
Sbjct: 185 SMWEGG 190


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 1 PTVWEGGSVW 10
P EGG VW
Sbjct: 71 PVKREGGVVW 80




142|Sequence|706|715|GGSVWDLPLD

>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 GGSVWDLP 8
GG VWDLP
Sbjct: 340 GGVVWDLP 347


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGSVWDL 7
GGSVWDL
Sbjct: 90 GGSVWDL 96


>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGSVWDLPL 9
GG V++LPL
Sbjct: 151 GGEVYNLPL 159


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GSVWDLPLD 10
G VW PLD
Sbjct: 207 GKVWSNPLD 215


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGSVWD 6
GG VWD
Sbjct: 208 GGKVWD 213


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SVWDLPLD 10
S WD+PL+
Sbjct: 654 SQWDIPLN 661


>sp|DAPAL_THEPD|UNCHARACTERIZED DapA-like lyase Tpen_1666|Thermofilum pendens (strain DSM 2475

Query: 1 GGSVWDLP 8
GG VW +P
Sbjct: 71 GGKVWVIP 78


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VWDLPLD 10
VW+LP D
Sbjct: 12 VWELPKD 18


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GGSVWDLPL 9
GGSV LPL
Sbjct: 151 GGSVETLPL 159


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WDLPLD 10
W++PLD
Sbjct: 243 WNIPLD 248


>sp|MCRG_METVO|METHYL-COENZYME M reductase subunit gamma|Methanococcus voltae

Query: 2 GSVWDLPLD 10
G WD P+D
Sbjct: 196 GRPWDEPVD 204


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 4 VWDLPLD 10
+W+LP D
Sbjct: 1444 IWNLPWD 1450


>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 1 GGSVWDLP 8
G VWDLP
Sbjct: 96 GDDVWDLP 103


>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain

Query: 1 GGSVWDLPL 9
GG V DLP+
Sbjct: 48 GGEVGDLPV 56


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 4 VWDLPLD 10
VW+LP D
Sbjct: 15 VWELPED 21


>sp|Y869_HALLT|UPF0212 protein Hlac_0869|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GGSVWDLPLD 10
GG++ D+PL+
Sbjct: 97 GGALRDVPLE 106


>sp|FAU1_PYRAR|PROBABLE ribonuclease FAU-1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GGSVWDLP 8
GG V+D+P
Sbjct: 107 GGEVFDVP 114


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GGSVWDL 7
GG WDL
Sbjct: 532 GGQPWDL 538


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGSVWDLP 8
GGSVW P
Sbjct: 558 GGSVWIKP 565


>sp|GLYA_PYRCJ|SERINE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GGSVWDLPL 9
GGSV LP+
Sbjct: 108 GGSVASLPI 116


>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain ATCC

Query: 1 GGSVWDLP 8
G S WD+P
Sbjct: 136 GDSEWDVP 143


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GGSVWDLPLD 10
GG V ++P+D
Sbjct: 182 GGQVREVPVD 191


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 3 SVWDLPLD 10
S+W+ PL+
Sbjct: 936 SMWEYPLE 943


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 SVWDLPLD 10
S+W+ PL+
Sbjct: 936 SMWEYPLE 943


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 SVWDLPLD 10
S+W+ PL+
Sbjct: 936 SMWEYPLE 943


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 SVWDLPLD 10
S+W+ PL+
Sbjct: 936 SMWEYPLE 943


>sp|RS12_THEKO|SMALL ribosomal subunit protein uS12|Thermococcus kodakarensis (strain

Query: 1 GGSVWDLP 8
GGS+ D+P
Sbjct: 113 GGSMGDIP 120


>sp|RS12_THECE|SMALL ribosomal subunit protein uS12|Thermococcus celer

Query: 1 GGSVWDLP 8
GGS+ D+P
Sbjct: 113 GGSMGDIP 120


>sp|HEM3_HYPBU|PROBABLE porphobilinogen deaminase|Hyperthermus butylicus (strain DSM 5456

Query: 3 SVWDLP 8
++WDLP
Sbjct: 114 TIWDLP 119


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 GGSVWDL 7
GG WDL
Sbjct: 113 GGESWDL 119


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 GGSVWDL 7
GG WDL
Sbjct: 113 GGESWDL 119


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 VWDLPL 9
VWD+P+
Sbjct: 280 VWDVPV 285


>sp|RS12_PYRFU|SMALL ribosomal subunit protein uS12|Pyrococcus furiosus (strain ATCC

Query: 1 GGSVWDLP 8
GGS+ D+P
Sbjct: 113 GGSMGDIP 120


>sp|RS12_PYRAB|SMALL ribosomal subunit protein uS12|Pyrococcus abyssi (strain GE5 /

Query: 1 GGSVWDLP 8
GGS+ D+P
Sbjct: 113 GGSMGDIP 120


>sp|RS12_PYRHO|SMALL ribosomal subunit protein uS12|Pyrococcus horikoshii (strain ATCC

Query: 1 GGSVWDLP 8
GGS+ D+P
Sbjct: 113 GGSMGDIP 120


>sp|Y1695_PYRFU|UNCHARACTERIZED lipoprotein PF1695|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GSVWDLPLD 10
G +W PLD
Sbjct: 99 GFLWTTPLD 107


>sp|RNP1_PYRAB|RIBONUCLEASE P protein component 1|Pyrococcus abyssi (strain GE5 /

Query: 1 GGSVWDLPLD 10
G VW +P D
Sbjct: 82 GDKVWKVPKD 91




143|Sequence|711|720|DLPLDTTTPG

>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DLPLDTTTPG 10
++PLD PG
Sbjct: 251 NIPLDKVKPG 260


>sp|MRE11_SULTO|DNA double-strand break repair protein|Sulfurisphaera tokodaii (strain

Query: 1 DLPLDTT 7
DLP DTT
Sbjct: 328 DLPTDTT 334


>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LPLDTTTP 9
+P+DT TP
Sbjct: 42 VPVDTKTP 49


>sp|SFSA_PYRAR|SUGAR fermentation stimulation protein homolog|Pyrobaculum arsenaticum

Query: 1 DLPLDTTTP 9
+LP+D T P
Sbjct: 223 ELPVDLTPP 231




144|Sequence|716|725|TTTPGPALEQ

>sp|GCH3_METST|GTP cyclohydrolase III|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TTTPGPALE 9
T TPGP E
Sbjct: 16 TVTPGPRAE 24


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TTPGPALEQ 10
T PGP E+
Sbjct: 248 TPPGPGFEK 256




145|Sequence|721|730|PALEQLQQLE

>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 1 PALEQLQQL 9
P+L Q+QQL
Sbjct: 276 PSLAQVQQL 284


>sp|SRP54_METS5|SIGNAL recognition particle 54 kDa|Metallosphaera sedula (strain ATCC

Query: 2 ALEQLQQL 9
ALEQLQQ+
Sbjct: 139 ALEQLQQI 146


>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 2 ALEQLQQLE 10
ALEQLQ+ +
Sbjct: 235 ALEQLQEYD 243


>sp|Y2219_SACI2|MEMO1 family protein LS215_2219|Saccharolobus islandicus (strain L.S.2.15

Query: 2 ALEQLQQLE 10
A+E++QQL+
Sbjct: 213 AIEKIQQLD 221


>sp|Y739_SACI1|MEMO1 family protein YN1551_0739|Saccharolobus islandicus (strain

Query: 2 ALEQLQQLE 10
A+E++QQL+
Sbjct: 213 AIEKIQQLD 221


>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 2 ALEQLQQLE 10
A+E++QQL+
Sbjct: 213 AIEKIQQLD 221


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PALEQLQQ 8
PALE+L++
Sbjct: 29 PALEELEE 36


>sp|Y2134_SACI3|MEMO1 family protein M1627_2134|Saccharolobus islandicus (strain M.16.27)

Query: 2 ALEQLQQLE 10
A+E++QQL+
Sbjct: 213 AIEKIQQLD 221


>sp|Y2061_SACI6|MEMO1 family protein M164_2061|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ALEQLQQLE 10
A+E++QQL+
Sbjct: 213 AIEKIQQLD 221


>sp|Y2054_SACI4|MEMO1 family protein M1425_2054|Saccharolobus islandicus (strain M.14.25

Query: 2 ALEQLQQLE 10
A+E++QQL+
Sbjct: 213 AIEKIQQLD 221




146|Sequence|726|735|LQQLEKAKAA

>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 2 QQLEKAKAA 10
++LEKAKA
Sbjct: 193 ERLEKAKAG 201




147|Sequence|731|740|KAKAAKLEQE

>sp|IF6_CENSY|TRANSLATION initiation factor 6|Cenarchaeum symbiosum (strain A)

Query: 1 KAKAAKLE 8
KAKAA+LE
Sbjct: 33 KAKAARLE 40




148|Sequence|736|745|KLEQERREAE

>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KLEQERREAE 10
+LE+E+R AE
Sbjct: 88 RLEEEKRSAE 97


>sp|SYH_METS5|HISTIDINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KLEQERREAE 10
KLE+ REAE
Sbjct: 225 KLEEAMREAE 234




149|Sequence|741|750|RREAEMRAKR

>sp|SUA5_PYRAB|THREONYLCARBAMOYL-AMP synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 EAEMRAKR 10
EAEM AKR
Sbjct: 84 EAEMLAKR 91


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RREAEMRAKR 10
R EAE RAK+
Sbjct: 787 RNEAEDRAKK 796




150|Sequence|746|755|MRAKREEEER

***** No hits found ******


151|Sequence|751|760|EEEERKRQEE

>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EEEERKRQE 9
E+EE++R+E
Sbjct: 147 EDEEKRRKE 155




152|Sequence|756|765|KRQEELRRQQ

>sp|Y2133_ARCFU|UNCHARACTERIZED protein AF_2133|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 EELRRQQ 10
EELRRQ+
Sbjct: 32 EELRRQK 38


>sp|CSA2B_SACS2|CRISPR-ASSOCIATED aCascade subunit Cas7/Csa2 2|Saccharolobus solfataricus (strain

Query: 1 KRQEELRRQQ 10
K +EEL RQ+
Sbjct: 206 KGEEELERQK 215




153|Sequence|761|770|LRRQQEEILR

>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LRRQQEEILR 10
LR+Q E+ILR
Sbjct: 740 LRKQLEDILR 749


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 RRQQEEI 8
RR+QEEI
Sbjct: 506 RRKQEEI 512




154|Sequence|766|775|EEILRRQQEE

>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 1 EEILRRQQE 9
EEILRR++E
Sbjct: 147 EEILRRKEE 155


>sp|DPHB_HALWD|DIPHTHINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EEILRRQQEE 10
E+ILR+ Q E
Sbjct: 67 EDILRKAQSE 76


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EEILRRQQEE 10
EE+L+R EE
Sbjct: 129 EEVLKRDPEE 138


>sp|CAS2_KORCO|CRISPR-ASSOCIATED endoribonuclease Cas2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 EEILRRQQ 8
EEILRRQ
Sbjct: 53 EEILRRQN 60




155|Sequence|771|780|RQQEEERKRR

>sp|Y1621_ARCFU|UPF0324 membrane protein AF_1621|Archaeoglobus fulgidus (strain ATCC

Query: 2 QQEEERKR 9
Q++EE+KR
Sbjct: 61 QRDEEKKR 68


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RQQEEERKRR 10
+QQE+E KR+
Sbjct: 733 KQQEQESKRK 742


>sp|PRIL_METBF|DNA primase large subunit PriL|Methanosarcina barkeri (strain Fusaro /

Query: 1 RQQEEERKRR 10
R+QE+E KRR
Sbjct: 392 RKQEKETKRR 401




156|Sequence|776|785|ERKRREEEEL

>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERKRREEEEL 10
ERKRR EE++
Sbjct: 37 ERKRRVEEKI 46




157|Sequence|781|790|EEEELARRKQ

>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EEEELARRKQ 10
+E+ELARR+Q
Sbjct: 373 DEKELARRRQ 382


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 EEEELARRKQ 10
+E ELARR+Q
Sbjct: 373 DERELARRRQ 382


>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 1 EEEELARRKQ 10
E EE++RRK+
Sbjct: 251 EVEEISRRKE 260


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EEELARRK 9
EEEL +RK
Sbjct: 515 EEELEKRK 522


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 1 EEEELARRK 9
E+EEL +RK
Sbjct: 375 EDEELGKRK 383


>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 1 EEEELARRKQ 10
E EELAR+ Q
Sbjct: 321 ETEELARKLQ 330


>sp|OTC_METHJ|ORNITHINE carbamoyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EEEELARRKQ 10
+EEE+ RR+Q
Sbjct: 228 QEEEIDRRRQ 237


>sp|AROC_PYRAB|CHORISMATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 EEEELARRK 9
EE ELARR+
Sbjct: 187 EEIELARRE 195




158|Sequence|786|795|ARRKQEEALR

>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ARRKQEEALR 10
ARR +EEAL+
Sbjct: 7 ARRDKEEALK 16


>sp|NADK_PYRFU|NAD kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ARRKQEEALR 10
ARR +EEAL+
Sbjct: 7 ARRDKEEALK 16


>sp|NADK_THESM|NAD kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 ARRKQEEALR 10
ARR +EEAL+
Sbjct: 7 ARRDREEALK 16


>sp|NADK_PYRAB|NAD kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 ARRKQEEALR 10
ARR +EEAL+
Sbjct: 7 ARRDREEALK 16


>sp|UPP_PYRAR|URACIL phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ARRKQEEA 8
ARRK+EE
Sbjct: 102 ARRKEEEG 109


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 2 RRKQEEALR 10
R K+EEAL+
Sbjct: 11 REKREEALK 19


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 1 ARRKQEEALR 10
ARR EEA R
Sbjct: 93 ARRDDEEAWR 102




159|Sequence|791|800|EEALRRQREQ

>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EEALRRQREQ 10
EEA+RRQ E+
Sbjct: 72 EEAVRRQLEK 81


>sp|MTRA_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 EEALRRQREQ 10
EEA+ R R+Q
Sbjct: 124 EEAVERYRDQ 133


>sp|MTRA_METMS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanohalophilus mahii (strain ATCC

Query: 1 EEALRRQREQ 10
EEA++R +EQ
Sbjct: 119 EEAVQRYQEQ 128


>sp|HIS3_HALMA|PHOSPHORIBOSYL-AMP cyclohydrolase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EEALRRQRE 9
EEALR+ RE
Sbjct: 34 EEALRKTRE 42


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 1 EEALRRQRE 9
EEALRR E
Sbjct: 115 EEALRRIEE 123


>sp|Y096_PYRAR|PROTEIN Pars_0096|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EEALRRQREQ 10
EEALR RE+
Sbjct: 96 EEALRMVREK 105


>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 2 EALRRQREQ 10
EALR+Q+++
Sbjct: 584 EALRKQKDE 592


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 EEALRRQREQ 10
+EAL +QRE+
Sbjct: 297 KEALLKQRER 306




160|Sequence|796|805|RQREQEIALR

>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 2 QREQEIA 8
Q+EQEIA
Sbjct: 5 QKEQEIA 11


>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans

Query: 2 QREQEIA 8
Q+EQEIA
Sbjct: 5 QKEQEIA 11




161|Sequence|801|810|EIALRRQREE

>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EIALRRQREE 10
E+ALRR EE
Sbjct: 83 ELALRRLEEE 92




162|Sequence|806|815|RQREEEERQQ

***** No hits found ******


163|Sequence|811|820|EERQQQEEAL

>sp|TDXH_PYRHO|PEROXIREDOXIN horikoshii (strain ATCC 700860

Query: 1 EERQQQEEA 9
EE++Q+EEA
Sbjct: 189 EEKKQREEA 197


>sp|Y691_METJA|DNA-BINDING protein MJ0691|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ERQQQEEAL 10
E+QQQEEAL
Sbjct: 20 EQQQQEEAL 28


>sp|TDXH_PYRAB|PEROXIREDOXIN abyssi (strain GE5 /

Query: 1 EERQQQEEA 9
EE++Q+EEA
Sbjct: 189 EEKKQREEA 197




164|Sequence|816|825|QEEALRRLEE

>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 1 QEEALRRLEE 10
+EEALRR+EE
Sbjct: 114 REEALRRIEE 123


>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QEEALRRLEE 10
E ALRRLEE
Sbjct: 82 HELALRRLEE 91


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 2 EEALRRLEE 10
EEALRRL++
Sbjct: 155 EEALRRLKK 163


>sp|RL4_METMJ|LARGE ribosomal subunit protein uL4|Methanoculleus marisnigri (strain

Query: 2 EEALRRLEE 10
E A+RRLEE
Sbjct: 239 ESAIRRLEE 247


>sp|FOLD_THEVO|BIFUNCTIONAL protein FolD|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QEEALRRLEE 10
++E +RR+EE
Sbjct: 71 KQELVRRIEE 80


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EEALRRLEE 10
EEAL++LE+
Sbjct: 364 EEALKKLEQ 372


>sp|HIS4_PYRAE|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrobaculum aerophilum (strain

Query: 3 EALRRLEE 10
EA+RRLEE
Sbjct: 144 EAVRRLEE 151


>sp|PDXS_HALWD|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloquadratum walsbyi (strain

Query: 2 EEALRRLEE 10
+EALRR++E
Sbjct: 141 QEALRRIDE 149


>sp|SERK_STAMF|ATP-DEPENDENT L-serine kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 QEEALRRLEE 10
++EALR LEE
Sbjct: 192 KDEALRDLEE 201


>sp|NADK_ARCFU|NAD kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EEALRRLE 9
EEAL+RLE
Sbjct: 17 EEALKRLE 24


>sp|PDXS_NATPD|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Natronomonas pharaonis (strain

Query: 3 EALRRLEE 10
EALRR++E
Sbjct: 141 EALRRIDE 148


>sp|PDXS_HALMA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloarcula marismortui (strain

Query: 3 EALRRLEE 10
EALRR++E
Sbjct: 142 EALRRIDE 149


>sp|Y1756_PYRFU|UPF0145 protein PF1756|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QEEALRRLEE 10
+EEALRR+ E
Sbjct: 65 REEALRRMIE 74


>sp|SRP19_PYRCJ|SIGNAL recognition particle 19 kDa|Pyrobaculum calidifontis (strain DSM

Query: 2 EEALRRL 8
EEALRRL
Sbjct: 41 EEALRRL 47


>sp|PDXS_HALSA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halobacterium salinarum (strain

Query: 3 EALRRLEE 10
EALRR++E
Sbjct: 142 EALRRIDE 149


>sp|PDXS_HALS3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halobacterium salinarum (strain

Query: 3 EALRRLEE 10
EALRR++E
Sbjct: 142 EALRRIDE 149


>sp|GGGPS_PYRAB|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 EEALRRLEE 10
+EA R+LEE
Sbjct: 238 DEAKRKLEE 246


>sp|Y651_METJA|PUTATIVE protease MJ0651|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QEEALRRLEE 10
+E+AL++LE+
Sbjct: 249 EEDALKKLEQ 258


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 2 EEALRRLEE 10
EEAL +LEE
Sbjct: 233 EEALVKLEE 241


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EEALRRLEE 10
E+ALRR+E+
Sbjct: 450 EDALRRIEK 458


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 1 QEEALRRLEE 10
Q EA+R+L E
Sbjct: 16 QPEAIRKLSE 25


>sp|TRKA2_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 2 EEALRRLEE 10
E+ALRR +E
Sbjct: 32 EDALRRADE 40


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 QEEALRRLE 9
+EE L+RLE
Sbjct: 759 REELLKRLE 767


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 QEEALRRLE 9
+EE L+RLE
Sbjct: 759 REELLKRLE 767


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 QEEALRRLEE 10
E+ LRR+EE
Sbjct: 530 SEDVLRRVEE 539


>sp|Y490_PYRAB|UPF0145 protein PYRAB04900|Pyrococcus abyssi (strain GE5 /

Query: 1 QEEALRRL 8
+EEALRR+
Sbjct: 64 REEALRRM 71


>sp|TRPA_METM6|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C6 /

Query: 2 EEALRRLEE 10
EEAL +LEE
Sbjct: 233 EEALVKLEE 241


>sp|SYH_PYRAR|HISTIDINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QEEALRRLEE 10
Q ALRR+EE
Sbjct: 22 QLYALRRMEE 31


>sp|CDVB_SULAC|CELL division protein B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EEALRRLEE 10
+EA+RRL E
Sbjct: 38 DEAIRRLRE 46




165|Sequence|821|830|RRLEERRREE

>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 RLEERRREE 10
+LEE R+EE
Sbjct: 562 KLEESRKEE 570


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 RLEERRREE 10
R+E+++REE
Sbjct: 529 RIEDKQREE 537


>sp|DPHB_METAR|DIPHTHINE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 RLEERRRE 9
++EERR+E
Sbjct: 186 KVEERRKE 193




166|Sequence|826|835|RRREEEERRK

>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain ATCC

Query: 3 REEEERRK 10
R +EERRK
Sbjct: 295 RYDEERRK 302


>sp|PANB_PYRAE|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 REEEERRK 10
R EE+RRK
Sbjct: 154 RTEEQRRK 161


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 REEEERRK 10
+EEEER+K
Sbjct: 108 KEEEERKK 115




167|Sequence|831|840|EERRKQEELL

>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EERRKQEEL 9
E+RRKQEE+
Sbjct: 504 EDRRKQEEI 512


>sp|Y658_METJA|UNCHARACTERIZED protein MJ0658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EERRKQEELL 10
EER K+E+LL
Sbjct: 163 EERYKEEKLL 172


>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EERRKQEELL 10
EERRKQ E L
Sbjct: 137 EERRKQWEEL 146


>sp|APGM_METM6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C6 /

Query: 1 EERRKQ 6
EERRKQ
Sbjct: 205 EERRKQ 210


>sp|GRPE_PICTO|PROTEIN GrpE|Picrophilus torridus (strain ATCC 700027

Query: 2 ERRKQEELL 10
ER+K EELL
Sbjct: 27 ERKKNEELL 35


>sp|APGM_METM5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C5 /

Query: 1 EERRKQ 6
EERRKQ
Sbjct: 205 EERRKQ 210


>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 1 EERRKQ 6
EERRKQ
Sbjct: 205 EERRKQ 210


>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EERRKQ 6
EERRKQ
Sbjct: 205 EERRKQ 210


>sp|PYRB_METJA|ASPARTATE carbamoyltransferase catalytic subunit|Methanocaldococcus

Query: 1 EERRKQEELL 10
+E RK EELL
Sbjct: 20 DEARKMEELL 29


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EERRKQEELL 10
EER+K EE++
Sbjct: 18 EERKKVEEIM 27




168|Sequence|836|845|QEELLRKQEE

>sp|ARGDC_PYRNV|ARGININE decarboxylase proenzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 EELLRKQEE 10
EELLR QE+
Sbjct: 25 EELLRDQEK 33


>sp|NADA_METB6|QUINOLINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 QEELLRKQEE 10
QEE+LR +E+
Sbjct: 8 QEEILRLKEK 17


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QEELLRKQEE 10
Q+E+L+K EE
Sbjct: 30 QDEILKKMEE 39




169|Sequence|841|850|RKQEEEAAKW

>sp|SPSS2_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 EEAAKW 10
EEAAKW
Sbjct: 68 EEAAKW 73


>sp|CCA_SACI7|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RKQEEEAAKW 10
RK EEA+KW
Sbjct: 183 RKVLEEASKW 192


>sp|CCA_SACI4|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RKQEEEAAKW 10
RK EEA+KW
Sbjct: 183 RKVLEEASKW 192


>sp|CCA_SACI3|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 RKQEEEAAKW 10
RK EEA+KW
Sbjct: 183 RKVLEEASKW 192


>sp|CCA_SACI2|CCA-ADDING enzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RKQEEEAAKW 10
RK EEA+KW
Sbjct: 183 RKVLEEASKW 192


>sp|CCA_SACI1|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RKQEEEAAKW 10
RK EEA+KW
Sbjct: 183 RKVLEEASKW 192


>sp|CCA_SACI6|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RKQEEEAAKW 10
RK EEA+KW
Sbjct: 183 RKVLEEASKW 192


>sp|CCA_SACS2|CCA-ADDING enzyme|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RKQEEEAAKW 10
RK EEA+KW
Sbjct: 183 RKVLEEASKW 192


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 1 RKQEEEAAK 9
RK+EE+A K
Sbjct: 77 RKKEEDARK 85


>sp|LYSK_PYRAB|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus abyssi

Query: 3 QEEEAAKW 10
+EEEAAK+
Sbjct: 24 KEEEAAKF 31




170|Sequence|846|855|EAAKWAREEE

>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 AAKWARE 8
AA+WARE
Sbjct: 426 AARWARE 432


>sp|HIS6_METB6|IMIDAZOLE glycerol phosphate synthase subunit|Methanoregula boonei (strain

Query: 1 EAAKWAREEE 10
+A +WA+E E
Sbjct: 169 DAVRWAKEAE 178


>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EAAKWAREE 9
+A KWARE+
Sbjct: 252 DAMKWAREQ 260


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KWAREE 9
KW+REE
Sbjct: 149 KWSREE 154


>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EAAKWARE 8
E A+WARE
Sbjct: 276 ETARWARE 283


>sp|HIS8_HALLT|HISTIDINOL-PHOSPHATE aminotransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EAAKWARE 8
E A+WARE
Sbjct: 276 ETARWARE 283


>sp|CETZ_METTP|TUBULIN-LIKE protein CetZ|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EAAKWAREEE 10
E AKWA +EE
Sbjct: 333 EKAKWAIQEE 342


>sp|HIS6_PYRAE|IMIDAZOLE glycerol phosphate synthase subunit|Pyrobaculum aerophilum (strain

Query: 1 EAAKWAREEE 10
+A KWA+E E
Sbjct: 155 DAVKWAKEVE 164


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 1 EAAKWAREEE 10
E WA EEE
Sbjct: 150 EGVSWAVEEE 159


>sp|HIS8_HALWD|HISTIDINOL-PHOSPHATE aminotransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EAAKWARE 8
E A+WARE
Sbjct: 276 ETARWARE 283


>sp|RPO1C_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Aeropyrum pernix (strain ATCC 700893

Query: 1 EAAKWAREEE 10
EAA W EEE
Sbjct: 368 EAAVWGEEEE 377


>sp|RL30E_PYRAE|LARGE ribosomal subunit protein eL30|Pyrobaculum aerophilum (strain

Query: 1 EAAKWAREE 9
A KWAR++
Sbjct: 41 NAPKWARDD 49


>sp|METE_AERPE|METHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EAAKWAREE 9
EAA+ AREE
Sbjct: 323 EAARLAREE 331


>sp|RL30E_PYRCJ|LARGE ribosomal subunit protein eL30|Pyrobaculum calidifontis (strain

Query: 1 EAAKWAREE 9
A +WARE+
Sbjct: 41 NAPRWARED 49


>sp|LIVG_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus (strain

Query: 2 AAKWAREEE 10
+ +W +EEE
Sbjct: 115 SGRWLKEEE 123


>sp|HTR4_HALSA|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 700922

Query: 1 EAAKWAREE 9
EAA W+R++
Sbjct: 144 EAAPWSRQQ 152


>sp|HTR4_HALS3|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 29341

Query: 1 EAAKWAREE 9
EAA W+R++
Sbjct: 144 EAAPWSRQQ 152




171|Sequence|851|860|AREEEEAQRR

>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 REEEEAQRR 10
R+EEEAQ++
Sbjct: 227 RKEEEAQKK 235




172|Sequence|856|865|EAQRRLEENR

>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 1 EAQRRLEE 8
EA+RRLEE
Sbjct: 113 EAERRLEE 120


>sp|HTR8_HALS3|TRANSDUCER protein Htr8|Halobacterium salinarum (strain ATCC 29341

Query: 2 AQRRLEENR 10
+Q+RLEE R
Sbjct: 216 SQKRLEEAR 224


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EAQRRLEEN 9
E RRLE+N
Sbjct: 213 EVNRRLEDN 221




173|Sequence|861|870|LEENRLRMEE

>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 LEENRLRME 9
L+ENRL ME
Sbjct: 520 LDENRLVME 528




174|Sequence|866|875|LRMEEEAARL

>sp|G1PDH_THEPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermofilum pendens (strain DSM 2475

Query: 1 LRMEEEAARL 10
LRM E AAR+
Sbjct: 192 LRMAETAARM 201


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 MEEEAARL 10
M++EAARL
Sbjct: 204 MKQEAARL 211


>sp|TF2B_PYRAB|TRANSCRIPTION initiation factor IIB|Pyrococcus abyssi (strain GE5 /

Query: 3 MEEEAARL 10
+EEEAARL
Sbjct: 129 VEEEAARL 136


>sp|Y1972_METMJ|DNA-BINDING protein Memar_1972|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 MEEEAAR 9
MEEEAAR
Sbjct: 27 MEEEAAR 33


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 MEEEAARL 10
+EEEAARL
Sbjct: 129 VEEEAARL 136


>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 3 MEEEAARL 10
+EEEAARL
Sbjct: 129 VEEEAARL 136


>sp|TF2B_PYRWO|TRANSCRIPTION initiation factor IIB|Pyrococcus woesei

Query: 3 MEEEAARL 10
+EEEAARL
Sbjct: 129 VEEEAARL 136


>sp|TF2B_PYRFU|TRANSCRIPTION initiation factor IIB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 MEEEAARL 10
+EEEAARL
Sbjct: 129 VEEEAARL 136




175|Sequence|871|880|EAARLRHEEE

>sp|HFLX_HYPBU|GTPASE HflX|Hyperthermus butylicus (strain DSM 5456

Query: 1 EAARLRHE 8
E ARLRHE
Sbjct: 122 ELARLRHE 129


>sp|PORC_METTH|PYRUVATE synthase subunit PorC|Methanothermobacter thermautotrophicus

Query: 1 EAARLRHEE 9
EAAR+ +EE
Sbjct: 164 EAARMAYEE 172


>sp|HIS4_ARCFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Archaeoglobus fulgidus (strain

Query: 3 ARLRHEE 9
RLRHEE
Sbjct: 59 GRLRHEE 65


>sp|RL19E_PYRAB|LARGE ribosomal subunit protein eL19|Pyrococcus abyssi (strain GE5 /

Query: 3 ARLRHEEE 10
AR+RHE++
Sbjct: 63 ARIRHEQK 70




176|Sequence|876|885|RHEEEERKRK

>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 2 HEEEERKRK 10
H EE+RKRK
Sbjct: 496 HAEEDRKRK 504


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HEEEERKRK 10
H EE+RKRK
Sbjct: 496 HAEEDRKRK 504


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 2 HEEEERKRK 10
H EE+RKRK
Sbjct: 496 HAEEDRKRK 504


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 2 HEEEERKRK 10
H EE++KRK
Sbjct: 496 HAEEDKKRK 504


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RHEEEERKR 9
+H EE+RK+
Sbjct: 50 KHIEEKRKK 58


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HEEEERKRK 10
H EE++KRK
Sbjct: 496 HAEEDKKRK 504


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RHEEEERKRK 10
R EE+++KRK
Sbjct: 445 RFEEQDKKRK 454


>sp|SYK2_METMA|LYSINE--TRNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RHEEEERKRK 10
R EE+++KRK
Sbjct: 445 RFEEQDKKRK 454


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EEEERKRK 10
E+EE++RK
Sbjct: 147 EDEEKRRK 154




177|Sequence|881|890|ERKRKELEVQ

>sp|MTAD2_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERKRKELEV 9
ER RKELE+
Sbjct: 147 ERARKELEI 155


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ERKRKELEVQ 10
ERKRKE+E++
Sbjct: 79 ERKRKEIELK 88


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 ERKRKELEVQ 10
ERKRKE+E++
Sbjct: 79 ERKRKEIELK 88


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 ERKRKELEVQ 10
ERKRKE+E++
Sbjct: 79 ERKRKEIELK 88


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ERKRKELEVQ 10
ERKRKE+E++
Sbjct: 79 ERKRKEIELK 88


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 ERKRKELEVQ 10
ERKRKE+E++
Sbjct: 79 ERKRKEIELK 88


>sp|ARGB_METPE|ACETYLGLUTAMATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 KRKELEV 9
KRKEL+V
Sbjct: 129 KRKELQV 135


>sp|GVPG2_HALSA|GAS vesicle protein G2|Halobacterium salinarum (strain ATCC 700922

Query: 1 ERKRKELEVQ 10
ER+++ELE Q
Sbjct: 55 ERRKQELEAQ 64


>sp|Y1110_METJA|UNCHARACTERIZED protein MJ1110|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERKRKELEVQ 10
ERK KELE++
Sbjct: 296 ERKLKELELK 305


>sp|Y1356_METJA|UNCHARACTERIZED protein MJ1356|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERKRKELE 8
E KRKELE
Sbjct: 63 ESKRKELE 70


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ERKRKELEVQ 10
ERK+KEL+++
Sbjct: 83 ERKKKELQLK 92




178|Sequence|886|895|ELEVQRQKEL

>sp|SUCC_IGNH4|SUCCINATE--COA ligase [ADP-forming] subunit beta|Ignicoccus hospitalis (strain

Query: 1 ELEVQRQKEL 10
ELE R++EL
Sbjct: 219 ELEASREREL 228




179|Sequence|891|900|RQKELMRQRQ

>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RQKELMRQ 8
RQKEL+R+
Sbjct: 344 RQKELLRE 351


>sp|RADA_METM7|DNA repair and recombination protein|Methanococcus maripaludis

Query: 4 ELMRQRQ 10
EL+RQRQ
Sbjct: 69 ELLRQRQ 75


>sp|RADA_METM6|DNA repair and recombination protein|Methanococcus maripaludis

Query: 4 ELMRQRQ 10
EL+RQRQ
Sbjct: 69 ELLRQRQ 75


>sp|NTPPA_METMA|DTTP/UTP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RQKELMRQ 8
R+KEL+RQ
Sbjct: 12 RRKELLRQ 19




180|Sequence|896|905|MRQRQQQQEA

>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 MRQRQQQQE 9
MR+RQQ+Q+
Sbjct: 663 MRKRQQKQD 671


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 MRQRQQQQE 9
MR+RQQ+Q+
Sbjct: 663 MRKRQQKQD 671


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 1 MRQRQQQQEA 10
M++RQQQ+EA
Sbjct: 1 MQRRQQQKEA 10




181|Sequence|901|910|QQQEALRRLQ

>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 2 QQEALRRL 9
QQEAL+RL
Sbjct: 519 QQEALKRL 526


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 2 QQEALRRLQ 10
++EALRR++
Sbjct: 114 REEALRRIE 122


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 3 QEALRRLQ 10
+EALRRL+
Sbjct: 155 EEALRRLK 162


>sp|GVPK_HALMT|GAS vesicle protein K|Haloferax mediterranei (strain ATCC 33500

Query: 2 QQEALRRLQ 10
+QEA+RR++
Sbjct: 34 EQEAVRRME 42




182|Sequence|906|915|LRRLQQQQQQ

>sp|NFI_PICTO|BIFUNCTIONAL methyltransferase/endonuclease|Picrophilus torridus (strain ATCC

Query: 1 LRRLQQQQQQ 10
L+RLQ++Q++
Sbjct: 108 LKRLQEEQEK 117


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LRRLQQQQQQ 10
+RRLQ+ ++Q
Sbjct: 976 IRRLQEMRKQ 985


>sp|IF2A_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 LRRLQQQQQQ 10
LRR+ QQQ++
Sbjct: 82 LRRVTQQQRK 91


>sp|IF2A_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 1 LRRLQQQQQQ 10
LRR+ QQQ++
Sbjct: 82 LRRVTQQQRK 91




183|Sequence|911|920|QQQQQQQLAQ

***** No hits found ******


184|Sequence|916|925|QQLAQMKLPS

>sp|DNAG_SACI7|DNA primase DnaG|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 QQLAQMKLP 9
QQL Q+ LP
Sbjct: 297 QQLVQITLP 305


>sp|DNAG_SACI6|DNA primase DnaG|Saccharolobus islandicus (strain M.16.4 /

Query: 1 QQLAQMKLP 9
QQL Q+ LP
Sbjct: 297 QQLVQITLP 305


>sp|DNAG_SACI4|DNA primase DnaG|Saccharolobus islandicus (strain M.14.25 /

Query: 1 QQLAQMKLP 9
QQL Q+ LP
Sbjct: 297 QQLVQITLP 305


>sp|DNAG_SACI3|DNA primase DnaG|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 QQLAQMKLP 9
QQL Q+ LP
Sbjct: 297 QQLVQITLP 305


>sp|DNAG_SACI2|DNA primase DnaG|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 QQLAQMKLP 9
QQL Q+ LP
Sbjct: 297 QQLVQITLP 305


>sp|DNAG_SACI1|DNA primase DnaG|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 QQLAQMKLP 9
QQL Q+ LP
Sbjct: 297 QQLVQITLP 305




185|Sequence|921|930|MKLPSSSTWG

>sp|TDXH1_SULME|PEROXIREDOXIN 1|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 1 MKLPSSSTW 9
MKLP++ TW
Sbjct: 190 MKLPNAKTW 198


>sp|MTRB_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanopyrus kandleri (strain AV19

Query: 4 PSSSTWG 10
PS++TWG
Sbjct: 56 PSTTTWG 62


>sp|TDXH2_SULME|PEROXIREDOXIN 2|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 1 MKLPSSSTW 9
MK+P + +W
Sbjct: 190 MKMPKAKSW 198


>sp|NADE_PICTO|NH(3)-DEPENDENT NAD(+) synthetase|Picrophilus torridus (strain ATCC 700027

Query: 2 KLPSSSTWG 10
K PS+ WG
Sbjct: 178 KKPSAGLWG 186


>sp|SYT_METKA|THREONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 KLPSSSTW 9
KLP+ TW
Sbjct: 494 KLPTLPTW 501


>sp|SECD_METJA|PROTEIN-EXPORT membrane protein SecD|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KLPSSSTWG 10
K+P TW
Sbjct: 131 KIPQGETWA 139


>sp|RL44E_METJA|LARGE ribosomal subunit protein eL42|Methanocaldococcus jannaschii

Query: 4 PSSSTWG 10
PS TWG
Sbjct: 30 PSELTWG 36


>sp|TDXH1_SULTO|PEROXIREDOXIN 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MKLPSSSTW 9
+KLP++ W
Sbjct: 191 IKLPNAKAW 199


>sp|RS27A_PYRCJ|SMALL ribosomal subunit protein eS31|Pyrobaculum calidifontis (strain

Query: 2 KLPSSSTW 9
KLP ++TW
Sbjct: 12 KLPRAATW 19


>sp|RS27A_PYRAE|SMALL ribosomal subunit protein eS31|Pyrobaculum aerophilum (strain

Query: 2 KLPSSSTW 9
KLP ++TW
Sbjct: 12 KLPRAATW 19


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 3 LPSSSTWG 10
LP ++ WG
Sbjct: 76 LPETTVWG 83




186|Sequence|926|935|SSTWGQQSNT

>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 4 WGQQSN 9
WG QSN
Sbjct: 1201 WGGQSN 1206


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 4 WGQQSN 9
WG QSN
Sbjct: 1057 WGGQSN 1062


>sp|TRM56_CENSY|TRNA (cytidine(56)-2'-O)-methyltransferase|Cenarchaeum symbiosum

Query: 1 SSTWG 5
SSTWG
Sbjct: 51 SSTWG 55




187|Sequence|931|940|QQSNTTACQS

***** No hits found ******


188|Sequence|936|945|TACQSQATLS

***** No hits found ******


189|Sequence|941|950|QATLSLAEIQ

***** No hits found ******


190|Sequence|946|955|LAEIQKLEEE

>sp|RAD50_SULAC|DNA double-strand break repair Rad50|Sulfolobus acidocaldarius (strain

Query: 1 LAEIQKLEEE 10
L E+Q+LEEE
Sbjct: 509 LKELQRLEEE 518


>sp|MPTA_PYRHO|GTP cyclohydrolase MptA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LAEIQKLEEE 10
LA IQ+LEE+
Sbjct: 92 LAVIQRLEEK 101


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 1 LAEIQKLE 8
L+EIQKL+
Sbjct: 430 LSEIQKLD 437




191|Sequence|951|960|KLEEERERQL

>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 1 KLEEERER 8
KL+EERER
Sbjct: 62 KLKEERER 69


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KLEEERER 8
KL+EERER
Sbjct: 63 KLKEERER 70


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 KLEEERER 8
K++EERER
Sbjct: 61 KMKEERER 68


>sp|EF1A_THESM|ELONGATION factor 1-alpha|Thermococcus sibiricus (strain DSM 12597

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 60 RLKEERER 67


>sp|EF1A_THEKO|ELONGATION factor 1-alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 60 RLKEERER 67


>sp|EF1A_THECE|ELONGATION factor 1-alpha|Thermococcus celer

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 60 RLKEERER 67


>sp|EF1A_HYPBU|ELONGATION factor 1-alpha|Hyperthermus butylicus (strain DSM 5456

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 62 RLKEERER 69


>sp|EF1A_THEGJ|ELONGATION factor 1-alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 60 RLKEERER 67


>sp|EF1A_THEON|ELONGATION factor 1-alpha|Thermococcus onnurineus (strain NA1)

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 60 RLKEERER 67


>sp|EF1A_PYRHO|ELONGATION factor 1-alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 60 RLKEERER 67


>sp|EF1A_METMP|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain DSM 14266

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_METM7|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C7 /

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_METM6|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C6 /

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_METM5|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C5 /

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 2 LEEERER 8
L+EERER
Sbjct: 62 LKEERER 68


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_PYRAB|ELONGATION factor 1-alpha|Pyrococcus abyssi (strain GE5 /

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 60 RLKEERER 67


>sp|EF1A_METMA|ELONGATION factor 1-alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_METVS|ELONGATION factor 1-alpha|Methanococcus vannielii (strain ATCC 35089

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_METVA|ELONGATION factor 1-alpha|Methanococcus vannielii

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 1 KLEEERERQL 10
+LEEERER L
Sbjct: 593 QLEEERERLL 602


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_PYRFU|ELONGATION factor 1-alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 60 RLKEERER 67


>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KLEEERERQL 10
K+EEER+R L
Sbjct: 92 KIEEERDRIL 101


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 61 RLKEERER 68


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 2 LEEERER 8
LEEERER
Sbjct: 53 LEEERER 59


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LEEERERQL 10
LEEERER L
Sbjct: 94 LEEERERIL 102


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_CALMQ|ELONGATION factor 1-alpha|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 71 RLKEERER 78


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 KLEEERER 8
+++EERER
Sbjct: 63 RMKEERER 70


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 61 RLKEERER 68


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LEEERER 8
L+EERER
Sbjct: 63 LKEERER 69


>sp|EF1A_ARCFU|ELONGATION factor 1-alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 62 RLKEERER 69


>sp|PFDA_PICTO|PREFOLDIN subunit alpha|Picrophilus torridus (strain ATCC 700027

Query: 2 LEEERERQL 10
+EEERER +
Sbjct: 86 IEEERERTI 94


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 1 KLEEERER 8
KL+EERE+
Sbjct: 62 KLKEEREK 69


>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 61 RLKEERER 68


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KLEEERER 8
+L+EERER
Sbjct: 61 RLKEERER 68




192|Sequence|956|965|RERQLREEQR

***** No hits found ******


193|Sequence|961|970|REEQRRQQRE

***** No hits found ******


194|Sequence|966|975|RQQRELMKAL

>sp|KDGK_THETE|2-DEHYDRO-3-DEOXYGLUCONOKINASE tenax

Query: 1 RQQRELMKAL 10
R+ EL+KAL
Sbjct: 316 REAEELLKAL 325


>sp|SYP_CALMQ|PROLINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 RELMKAL 10
RELMKA+
Sbjct: 384 RELMKAI 390




195|Sequence|971|980|LMKALQQQQQ

>sp|Y480_METJA|UNCHARACTERIZED protein MJ0480|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LMKALQQQQQ 10
+M+ LQ++QQ
Sbjct: 77 MMEKLQEEQQ 86




196|Sequence|976|985|QQQQQQQQQK

***** No hits found ******


197|Sequence|981|990|QQQQKLSGWG

>sp|IPYR_SULTO|INORGANIC pyrophosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 KLSGWG 10
K+SGWG
Sbjct: 148 KISGWG 153


>sp|IPYR_SULAC|INORGANIC pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 KLSGWG 10
K+SGWG
Sbjct: 148 KISGWG 153


>sp|IPYR_SACS2|INORGANIC pyrophosphatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 KLSGWG 10
K+SGWG
Sbjct: 148 KISGWG 153


>sp|RS3A_METMA|SMALL ribosomal subunit protein eS1|Methanosarcina mazei (strain ATCC

Query: 3 QQKLSGW 9
Q+KL GW
Sbjct: 7 QRKLDGW 13


>sp|RS3A_METBF|SMALL ribosomal subunit protein eS1|Methanosarcina barkeri (strain

Query: 3 QQKLSGW 9
Q+KL GW
Sbjct: 7 QRKLDGW 13


>sp|RS3A_METAC|SMALL ribosomal subunit protein eS1|Methanosarcina acetivorans (strain

Query: 3 QQKLSGW 9
Q+KL GW
Sbjct: 7 QRKLDGW 13


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 3 QQKLSGW 9
QQKLSG+
Sbjct: 745 QQKLSGF 751




198|Sequence|986|995|LSGWGNVSKP

>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 LSGWGNVSKP 10
L GWG+V P
Sbjct: 526 LVGWGSVKIP 535


>sp|IPYR_SULTO|INORGANIC pyrophosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LSGWGNVSK 9
+SGWG VS+
Sbjct: 149 ISGWGGVSE 157


>sp|IPYR_SACS2|INORGANIC pyrophosphatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LSGWGNVSK 9
+SGWG+V++
Sbjct: 149 ISGWGSVAE 157


>sp|RL30_DESA1|LARGE ribosomal subunit protein uL30|Desulfurococcus amylolyticus

Query: 4 WGNVSKP 10
WG ++KP
Sbjct: 58 WGEINKP 64


>sp|KHSE_METKA|HOMOSERINE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 LSGWGNVSKP 10
+ GW +S+P
Sbjct: 218 MVGWDRISEP 227


>sp|MCR_SULTO|MALONYL-COA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LSGWGNVSKP 10
L+G G+V KP
Sbjct: 38 LAGKGSVGKP 47


>sp|IPYR_SULAC|INORGANIC pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LSGWGNVSK 9
+SGWG+ ++
Sbjct: 149 ISGWGSATE 157


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LSGWGN 6
LS WGN
Sbjct: 442 LSAWGN 447


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LSGWGNV 7
+S WGN+
Sbjct: 325 MSEWGNI 331


>sp|SYFA_PYRHO|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GWGNVSK 9
GW VSK
Sbjct: 113 GWAEVSK 119


>sp|MCR_METS5|MALONYL CoA reductase (NADP)|Metallosphaera sedula (strain ATCC 51363

Query: 1 LSGWGNVSKP 10
L+G G+V KP
Sbjct: 35 LAGKGSVGKP 44


>sp|IPYR_THEKO|INORGANIC pyrophosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LSGWGNVSK 9
+ GWGN +
Sbjct: 150 VEGWGNAEE 158




199|Sequence|991|1000|NVSKPSGTTK

>sp|Y770_METJA|UNCHARACTERIZED protein MJ0770|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NVSKPSGTTK 10
N+SKPS + K
Sbjct: 7 NLSKPSESIK 16


>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 1 NVSKPSGT 8
NVS P GT
Sbjct: 333 NVSSPIGT 340


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NVSKPSG 7
NVS PSG
Sbjct: 353 NVSDPSG 359


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NVSKPSG 7
NVS PSG
Sbjct: 353 NVSDPSG 359




200|Sequence|996|1005|SGTTKSLLEI

>sp|DAPB_METMJ|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SGTTKSLLEI 10
SGT K++LEI
Sbjct: 155 SGTAKTILEI 164




201|Sequence|1001|1010|SLLEIQQEEA

>sp|RS4E_STAMF|SMALL ribosomal subunit protein eS4|Staphylothermus marinus (strain ATCC

Query: 2 LLEIQQEEA 10
L+EI +EEA
Sbjct: 112 LIEIDKEEA 120


>sp|RS4E_DESA1|SMALL ribosomal subunit protein eS4|Desulfurococcus amylolyticus (strain

Query: 2 LLEIQQEEA 10
L+EI +EEA
Sbjct: 112 LIEISREEA 120




202|Sequence|1006|1015|QQEEARQMQK

>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 3 EEARQMQK 10
EEAR+M+K
Sbjct: 246 EEAREMEK 253


>sp|CDVB3_SULAC|CELL division protein B3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QEEARQMQK 10
+EEARQ+ K
Sbjct: 143 KEEARQLLK 151




203|Sequence|1011|1020|RQMQKQQQQQ

***** No hits found ******


204|Sequence|1016|1025|QQQQQQQHQQ

***** No hits found ******


205|Sequence|1021|1030|QQHQQPNRAR

>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QQHQQPNRAR 10
++H Q NRAR
Sbjct: 274 ERHIQKNRAR 283


>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QQHQQPNRAR 10
++H Q NRAR
Sbjct: 274 ERHIQKNRAR 283


>sp|PROB_METAC|GLUTAMATE 5-kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QQHQQPNRAR 10
++H Q NRAR
Sbjct: 274 ERHIQKNRAR 283


>sp|MOBDP_HALVD|PROBABLE molybdenum ABC transporter permease|Haloferax volcanii (strain

Query: 3 HQQPNR 8
H+QPNR
Sbjct: 3 HRQPNR 8


>sp|RIFK_SULTO|RIBOFLAVIN kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QHQQPNR 8
+H++PNR
Sbjct: 71 EHKEPNR 77


>sp|RIFK_SULAC|RIBOFLAVIN kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QHQQPNR 8
+H++PNR
Sbjct: 94 EHKEPNR 100


>sp|KADA_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QQHQQPNRA 9
Q+HQ NRA
Sbjct: 145 QRHQDLNRA 153


>sp|KADA_THEAC|ADENYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QQHQQPNRA 9
++HQ+ NRA
Sbjct: 138 REHQEINRA 146


>sp|KADA_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 QQHQQPNRA 9
Q+HQ NRA
Sbjct: 145 QRHQDLNRA 153


>sp|KADA_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QQHQQPNRA 9
Q+HQ NRA
Sbjct: 145 QRHQDLNRA 153


>sp|KADA_METTH|ADENYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 HQQPNRA 9
HQQ NRA
Sbjct: 144 HQQMNRA 150


>sp|KADA_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 QQHQQPNRA 9
Q+HQ NRA
Sbjct: 145 QRHQDLNRA 153




206|Sequence|1026|1035|PNRARNNTHS

>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 1 PNRARN 6
PNR+RN
Sbjct: 5 PNRSRN 10




207|Sequence|1031|1040|NNTHSNLHTS

>sp|ACDA2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 2 NTHSNLHTS 10
NTH+NL+ +
Sbjct: 134 NTHANLNAT 142


>sp|Y1873_ARCFU|UNCHARACTERIZED protein AF_1873|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NNTHSNLHTS 10
NN HS L S
Sbjct: 360 NNAHSKLKNS 369


>sp|PHP_SACS2|ARYLDIALKYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 3 THSNLHTS 10
THSN H +
Sbjct: 169 THSNAHNN 176


>sp|DPHB_METBU|DIPHTHINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NNTHSNLHTS 10
NN + LHT+
Sbjct: 158 NNIEAGLHTA 167




208|Sequence|1036|1045|NLHTSIGNSV

>sp|RNZ_METJA|RIBONUCLEASE Z|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLHTSIGNSV 10
N+H++IG++V
Sbjct: 249 NMHSTIGDAV 258


>sp|RL30_SULTO|LARGE ribosomal subunit protein uL30|Sulfurisphaera tokodaii (strain

Query: 2 LHTSIGN 8
LHT IGN
Sbjct: 72 LHTKIGN 78


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 1 NLHTSIGNS 9
N+H GNS
Sbjct: 355 NVHVETGNS 363


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 1 NLHTSIGNSV 10
N H IG+SV
Sbjct: 58 NSHVHIGDSV 67




209|Sequence|1041|1050|IGNSVWGSIN

>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 1 IGNSVWGSI 9
+G+ VWGS+
Sbjct: 51 VGSRVWGSL 59


>sp|APGM_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GNSVW 6
GNSVW
Sbjct: 211 GNSVW 215


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 3 NSVWGSIN 10
N+VW +IN
Sbjct: 267 NAVWDAIN 274


>sp|Y942_SACS2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 IGNSVWGSI 9
IG+ +W SI
Sbjct: 177 IGDVIWDSI 185


>sp|Y1579_SACI1|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 IGNSVWGSI 9
IG+ +W SI
Sbjct: 177 IGDVIWDSI 185


>sp|Y1371_SACI2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 IGNSVWGSI 9
IG+ +W SI
Sbjct: 177 IGDVIWDSI 185


>sp|Y1334_SACI3|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 IGNSVWGSI 9
IG+ +W SI
Sbjct: 177 IGDVIWDSI 185


>sp|Y1284_SACI4|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 IGNSVWGSI 9
IG+ +W SI
Sbjct: 177 IGDVIWDSI 185


>sp|Y1269_SACI7|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 IGNSVWGSI 9
IG+ +W SI
Sbjct: 177 IGDVIWDSI 185


>sp|Y1268_SACI6|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 IGNSVWGSI 9
IG+ +W SI
Sbjct: 177 IGDVIWDSI 185


>sp|AGOG_PYRAB|N-GLYCOSYLASE/DNA lyase|Pyrococcus abyssi (strain GE5 /

Query: 3 NSVWGSI 9
+S+WGSI
Sbjct: 125 SSLWGSI 131


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 NSVWGSIN 10
N+VW ++N
Sbjct: 451 NAVWSNLN 458


>sp|AROA_METAR|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocella arvoryzae (strain DSM

Query: 3 NSVWGSIN 10
+ VWGS++
Sbjct: 8 SDVWGSVD 15




210|Sequence|1046|1055|WGSINTGPPN

>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus

Query: 1 WGSINTGPP 9
WG +N G P
Sbjct: 50 WGIVNAGIP 58


>sp|Y995_METJA|UNCHARACTERIZED protein MJ0995|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 INTGPPN 10
+NT PPN
Sbjct: 137 VNTIPPN 143


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 1 WGSINT 6
WG INT
Sbjct: 591 WGVINT 596


>sp|SFSA_SACI2|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 1 WGSINTG 7
W SIN G
Sbjct: 205 WNSINEG 211


>sp|RL11_THEAC|LARGE ribosomal subunit protein uL11|Thermoplasma acidophilum (strain

Query: 2 GSINTGPP 9
G TGPP
Sbjct: 12 GKATTGPP 19


>sp|RL11_THEVO|LARGE ribosomal subunit protein uL11|Thermoplasma volcanium (strain

Query: 2 GSINTGPP 9
G TGPP
Sbjct: 12 GKATTGPP 19




211|Sequence|1051|1060|TGPPNQWASD

>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PPNQWASD 10
PPN+W ++
Sbjct: 195 PPNEWRAN 202


>sp|QUEE_METTH|7-CARBOXY-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PPNQWASD 10
PP QWA +
Sbjct: 210 PPEQWAQN 217


>sp|Y1460_METJA|UNCHARACTERIZED protein MJ1460|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TGPPNQWAS 9
+ PP QW S
Sbjct: 102 SNPPYQWVS 110


>sp|RS19_PYRAE|SMALL ribosomal subunit protein uS19|Pyrobaculum aerophilum (strain

Query: 3 PPNQWAS 9
PP +WA+
Sbjct: 22 PPEEWAT 28


>sp|RS19_PYRAR|SMALL ribosomal subunit protein uS19|Pyrobaculum arsenaticum (strain

Query: 3 PPNQWAS 9
PP +WA+
Sbjct: 23 PPEEWAT 29


>sp|HTPX_PYRIL|PROTEASE HtpX homolog|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GPPNQWA 8
GPPN +A
Sbjct: 137 GPPNAFA 143


>sp|HTPX_PYRCJ|PROTEASE HtpX homolog|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GPPNQWA 8
GPPN +A
Sbjct: 135 GPPNAFA 141


>sp|HTPX_PYRAE|PROTEASE HtpX homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GPPNQWA 8
GPPN +A
Sbjct: 137 GPPNAFA 143


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GPPNQW 7
G PN+W
Sbjct: 273 GKPNEW 278


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GPPNQW 7
G PN+W
Sbjct: 273 GKPNEW 278


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 GPPNQW 7
G PN+W
Sbjct: 273 GKPNEW 278


>sp|RS19_PYRCJ|SMALL ribosomal subunit protein uS19|Pyrobaculum calidifontis (strain

Query: 3 PPNQWAS 9
PP +W S
Sbjct: 22 PPEEWGS 28


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 GPPNQWASD 10
G PNQ A+D
Sbjct: 235 GGPNQTATD 243


>sp|CARA_PYRFU|CARBAMOYL phosphate synthase small chain|Pyrococcus furiosus (strain ATCC

Query: 4 PNQWASD 10
PN W+S+
Sbjct: 99 PNHWSSE 105


>sp|HISX_NATPD|HISTIDINOL dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GPPNQWAS 9
GP N+W +
Sbjct: 203 GPGNRWVT 210


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PPNQWAS 9
PP+QW +
Sbjct: 310 PPDQWTT 316


>sp|HISX_HALSA|HISTIDINOL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPPNQWAS 9
GP N+W +
Sbjct: 204 GPGNKWVT 211


>sp|GVPO_HALMT|GAS vesicle protein O|Haloferax mediterranei (strain ATCC 33500

Query: 3 PPNQWASD 10
PP Q ASD
Sbjct: 36 PPEQTASD 43


>sp|HISX_HALMA|HISTIDINOL dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GPPNQWAS 9
GP N+W +
Sbjct: 203 GPGNRWVT 210




212|Sequence|1056|1065|QWASDLVSSI

>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WASDLVSS 9
WASDLV S
Sbjct: 107 WASDLVDS 114


>sp|SYY_THEVO|TYROSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WASDLVSS 9
WAS LVSS
Sbjct: 106 WASQLVSS 113


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 1 QWASDLVSS 9
QWA DL+ S
Sbjct: 243 QWAYDLILS 251


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 QWASDLVSSI 10
++ASDLVS +
Sbjct: 507 EYASDLVSEL 516


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WASDLVSS 9
W SD+VS+
Sbjct: 269 WESDIVST 276


>sp|AGLQ_HALVD|ARCHAEAL glycosylation protein Q|Haloferax volcanii (strain ATCC 29605

Query: 2 WASDLVSSI 10
W++DL+S I
Sbjct: 272 WSTDLLSDI 280


>sp|Y733_METJA|UNCHARACTERIZED protein MJ0733|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WASDLVS 8
WA DL+S
Sbjct: 54 WAKDLLS 60


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WASDLVSSI 10
W SDL+ +I
Sbjct: 715 WGSDLIQNI 723


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 WASDLVS 8
W SD+VS
Sbjct: 269 WESDIVS 275


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QWASDLVSSI 10
Q ASDLVS +
Sbjct: 421 QAASDLVSRV 430




213|Sequence|1061|1070|LVSSIWSNAD

>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VSSIWSN 8
VSSIW N
Sbjct: 54 VSSIWCN 60


>sp|CDC62_ARCFU|ORC1-TYPE DNA replication protein 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LVSSIWSNAD 10
L+ +WSN D
Sbjct: 131 LMDRVWSNLD 140


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VSSIWSNAD 10
V++IW N D
Sbjct: 233 VTNIWINPD 241


>sp|CAH_METJA|PROBABLE carbonic anhydrase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 SSIWSNA 9
SS+W NA
Sbjct: 24 SSVWYNA 30




214|Sequence|1066|1075|WSNADTKNSN

>sp|RS15_METLZ|SMALL ribosomal subunit protein uS15|Methanocorpusculum labreanum

Query: 1 WSNADTK 7
WSN+D K
Sbjct: 25 WSNSDVK 31




215|Sequence|1071|1080|TKNSNMGFWD

>sp|IDI2_THESM|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus sibiricus (strain DSM 12597

Query: 1 TKNSNMGFWD 10
+KN + FWD
Sbjct: 248 SKNLALKFWD 257


>sp|RL3_NANEQ|LARGE ribosomal subunit protein uL3|Nanoarchaeum equitans (strain

Query: 2 KNSNMGFW 9
+ +MGFW
Sbjct: 10 RRGSMGFW 17


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 NSNMGF 8
N+NMGF
Sbjct: 310 NNNMGF 315


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 NMGFWD 10
N GFW+
Sbjct: 305 NQGFWE 310


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 5 NMGFWD 10
N GFW+
Sbjct: 305 NQGFWE 310


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TKNSNMGF 8
T N NMGF
Sbjct: 695 TYNDNMGF 702




216|Sequence|1076|1085|MGFWDDAVKE

>sp|RSMA_META3|PROBABLE ribosomal RNA small subunit|Methanococcus aeolicus (strain ATCC

Query: 3 FWDDAVKE 10
FW+D +KE
Sbjct: 66 FWEDIIKE 73


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 1 MGFWDDAVK 9
+G WDD V+
Sbjct: 164 LGIWDDIVR 172


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 MGFWDDAVKE 10
MG W +AV++
Sbjct: 670 MGLWGEAVRQ 679


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 3 FWDDAVKE 10
+WDD V++
Sbjct: 143 YWDDKVRQ 150


>sp|ALF1_PYRFU|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MGFWDDAVK 9
+GF DDA+K
Sbjct: 105 LGFVDDAIK 113


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 WDDAVKE 10
WDDAV E
Sbjct: 363 WDDAVSE 369


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FWDDAV 8
FWDD V
Sbjct: 154 FWDDKV 159


>sp|RNP3_METKA|RIBONUCLEASE P protein component 3|Methanopyrus kandleri (strain AV19 /

Query: 1 MGFWDDAVKE 10
MGF D VKE
Sbjct: 206 MGFEDSEVKE 215


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GFWDDAVKE 10
FWD+A +E
Sbjct: 398 AFWDNAERE 406


>sp|RL4_METTP|LARGE ribosomal subunit protein uL4|Methanothrix thermoacetophila (strain

Query: 2 GFWDDAVK 9
G WDD ++
Sbjct: 162 GLWDDVMR 169


>sp|DAPA_METPE|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 GFWDDAV 8
G WDDA+
Sbjct: 226 GDWDDAI 232


>sp|BRIX_METAC|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 1 MGFWDDAVK 9
+GF+DDA K
Sbjct: 61 LGFYDDAGK 69


>sp|FTSZ_METTH|CELL division protein FtsZ|Methanothermobacter thermautotrophicus

Query: 1 MGFWDDAVKE 10
M F +DA+KE
Sbjct: 1 MKFINDAIKE 10


>sp|TSR3_THEAC|16S rRNA aminocarboxypropyltransferase|Thermoplasma acidophilum (strain

Query: 1 MGFWDDA 7
MGF DDA
Sbjct: 117 MGFQDDA 123


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 1 MGFWDD 6
+G WDD
Sbjct: 164 LGIWDD 169


>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 1 MGFWDD 6
+G WDD
Sbjct: 164 LGIWDD 169


>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 3 FWDDAVK 9
FWDD +K
Sbjct: 5 FWDDGLK 11


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain NA1)

Query: 1 MGFWDD 6
+G WDD
Sbjct: 164 LGVWDD 169


>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GFWDDAV 8
G+WDD +
Sbjct: 73 GWWDDII 79


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 WDDAVKE 10
WDDA+ E
Sbjct: 363 WDDALSE 369


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 4 WDDAVKE 10
WDDA+ E
Sbjct: 363 WDDALSE 369


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MGFWD 5
+GFWD
Sbjct: 220 LGFWD 224


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 MGFWDD 6
+G WDD
Sbjct: 164 LGVWDD 169


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FWDDAVKE 10
WDD KE
Sbjct: 388 LWDDIKKE 395


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 WDDAVKE 10
WDDA+ E
Sbjct: 362 WDDALSE 368


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 4 WDDAV 8
WDDAV
Sbjct: 206 WDDAV 210




217|Sequence|1081|1090|DAVKEVGPRN

>sp|THIM_METB6|HYDROXYETHYLTHIAZOLE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 DAVKEVGPRN 10
DA+ E+GP++
Sbjct: 247 DAMAELGPQD 256


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 VKEVGPR 9
VKE+GP+
Sbjct: 8 VKEIGPQ 14


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 VKEVGPR 9
VKE+GP+
Sbjct: 8 VKEIGPQ 14


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 VKEVGPR 9
VKE+GP+
Sbjct: 8 VKEIGPQ 14


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 VKEVGPR 9
VKE+GP+
Sbjct: 8 VKEIGPQ 14


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 VKEVGPR 9
VKE+GP+
Sbjct: 8 VKEIGPQ 14


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 VKEVGPR 9
VKE+GP+
Sbjct: 8 VKEIGPQ 14


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DAVKEVGP 8
DAV+E GP
Sbjct: 299 DAVEEFGP 306


>sp|RS7_METLZ|SMALL ribosomal subunit protein uS7|Methanocorpusculum labreanum (strain

Query: 1 DAVKEVGPR 9
DAV GPR
Sbjct: 104 DAVANAGPR 112


>sp|RS7_METJA|SMALL ribosomal subunit protein uS7|Methanocaldococcus jannaschii (strain

Query: 1 DAVKEVGPR 9
DA++ GPR
Sbjct: 100 DAIENAGPR 108


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 AVKEVGPR 9
AVKEVG R
Sbjct: 183 AVKEVGDR 190


>sp|RS7_METHJ|SMALL ribosomal subunit protein uS7|Methanospirillum hungatei JF-1

Query: 1 DAVKEVGPR 9
DAV GPR
Sbjct: 104 DAVANAGPR 112


>sp|AROB_THEVO|3-DEHYDROQUINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 VKEVGPRN 10
+KE+GP N
Sbjct: 302 LKEIGPGN 309


>sp|R15PI_HALVD|RIBOSE 1,5-bisphosphate isomerase|Haloferax volcanii (strain ATCC 29605

Query: 3 VKEVGPRN 10
VKE PRN
Sbjct: 153 VKETRPRN 160


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 3 VKEVGP 8
VKEVGP
Sbjct: 33 VKEVGP 38


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 VKEVGPR 9
+KE+GPR
Sbjct: 365 MKELGPR 371


>sp|RS7_METMA|SMALL ribosomal subunit protein uS7|Methanosarcina mazei (strain ATCC

Query: 1 DAVKEVGPR 9
DA+ GPR
Sbjct: 99 DAIANAGPR 107


>sp|RS7_METAC|SMALL ribosomal subunit protein uS7|Methanosarcina acetivorans (strain

Query: 1 DAVKEVGPR 9
DA+ GPR
Sbjct: 99 DAIANAGPR 107




218|Sequence|1086|1095|VGPRNSTNKN

>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 2 GPRNSTNK 9
GPRNS+ K
Sbjct: 967 GPRNSSYK 974


>sp|SECG_PICTO|PREPROTEIN translocase subunit SecG|Picrophilus torridus (strain ATCC 700027

Query: 3 PRNSTNKN 10
P+N+TN+N
Sbjct: 2 PKNNTNEN 9




219|Sequence|1091|1100|STNKNKNNAS

***** No hits found ******


220|Sequence|1096|1105|KNNASLSKSV

>sp|THIM2_METST|HYDROXYETHYLTHIAZOLE kinase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KNNASLSKSV 10
K+NASL K+V
Sbjct: 159 KSNASLVKAV 168




221|Sequence|1101|1110|LSKSVGVSNR

>sp|RL10E_THESM|LARGE ribosomal subunit protein uL16|Thermococcus sibiricus (strain DSM

Query: 1 LSKSVGVSN 9
LSK+VG SN
Sbjct: 73 LSKNVGRSN 81


>sp|RFRNP_METMP|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain DSM 14266

Query: 1 LSKSVGVSN 9
+ KS+GVSN
Sbjct: 18 VRKSLGVSN 26


>sp|RFRNP_METM6|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C6 /

Query: 1 LSKSVGVSN 9
+ KS+GVSN
Sbjct: 18 VRKSLGVSN 26


>sp|RFRNP_METM5|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C5 /

Query: 1 LSKSVGVSN 9
+ KS+GVSN
Sbjct: 18 VRKSLGVSN 26


>sp|PYRDB_THEVO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma volcanium

Query: 1 LSKSVGVSNR 10
++KS+G+S R
Sbjct: 43 VTKSIGISER 52




222|Sequence|1106|1115|GVSNRQNKKV

***** No hits found ******


223|Sequence|1111|1120|QNKKVEEEEK

***** No hits found ******


224|Sequence|1116|1125|EEEEKLLKLF

>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 3 EEKLLKLF 10
EEK+LK+F
Sbjct: 34 EEKVLKIF 41


>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 2 EEEKLLKLF 10
EEE+LLK+F
Sbjct: 105 EEEELLKIF 113


>sp|MVK_PYRAB|MEVALONATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 EEEEKLLKL 9
+EEEK LKL
Sbjct: 241 DEEEKFLKL 249


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 2 EEEKLLKL 9
EE+K+LKL
Sbjct: 488 EEDKVLKL 495


>sp|MVK_PYRHO|MEVALONATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EEEEKLLKL 9
+EEEKL KL
Sbjct: 241 DEEEKLTKL 249


>sp|NTPPA_METBF|DTTP/UTP pyrophosphatase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EEEEKLLKLF 10
EE EK+LKL
Sbjct: 87 EEAEKMLKLL 96


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EEEKLLKLF 10
EEEKLL L+
Sbjct: 18 EEEKLLSLW 26


>sp|IF6_SULTO|TRANSLATION initiation factor 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EEEEKLLKLF 10
EE +KL KLF
Sbjct: 167 EELDKLSKLF 176


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 EEEEKLLKLF 10
EEE KLLK+
Sbjct: 425 EEETKLLKIM 434


>sp|RL32_METKA|LARGE ribosomal subunit protein eL32|Methanopyrus kandleri (strain AV19

Query: 1 EEEEKLLKL 9
+EEE+LLKL
Sbjct: 9 KEEERLLKL 17


>sp|IF6_NANEQ|TRANSLATION initiation factor 6|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EEEEKLLK 8
+EEEK++K
Sbjct: 33 KEEEKIIK 40


>sp|RL5_METTH|LARGE ribosomal subunit protein uL5|Methanothermobacter

Query: 1 EEEEKLLKLF 10
E EK+LK+F
Sbjct: 69 ERAEKVLKMF 78




225|Sequence|1121|1130|LLKLFQGVNK

>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LLKLFQGVNK 10
L+K QG+NK
Sbjct: 72 LIKTIQGLNK 81


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 3 KLFQGVNK 10
KLF G+NK
Sbjct: 743 KLFIGINK 750


>sp|QUEC_METM7|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C7 /

Query: 3 KLFQGVNK 10
K+F G+NK
Sbjct: 123 KIFSGLNK 130


>sp|RL2_PICTO|LARGE ribosomal subunit protein uL2|Picrophilus torridus (strain ATCC

Query: 2 LKLFQGVNK 10
LKL GVNK
Sbjct: 133 LKLPSGVNK 141


>sp|QUEC_METM6|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C6 /

Query: 3 KLFQGVNK 10
K+F G+NK
Sbjct: 123 KIFSGLNK 130


>sp|QUEC_METMP|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 KLFQGVNK 10
K+F G+NK
Sbjct: 123 KIFSGLNK 130


>sp|PGP_THEAC|PHOSPHOGLYCOLATE phosphatase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LKLFQGVN 9
LK+F G+N
Sbjct: 52 LKIFLGIN 59




226|Sequence|1126|1135|QGVNKAQDGF

>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QGVNKAQDGF 10
+G NKA+D F
Sbjct: 17 RGNNKARDAF 26


>sp|RL24_METVS|LARGE ribosomal subunit protein uL24|Methanococcus vannielii (strain

Query: 3 VNKAQDG 9
VNK QDG
Sbjct: 83 VNKKQDG 89


>sp|RL24_METVA|LARGE ribosomal subunit protein uL24|Methanococcus vannielii

Query: 3 VNKAQDG 9
VNK QDG
Sbjct: 83 VNKKQDG 89


>sp|RL24_METMP|LARGE ribosomal subunit protein uL24|Methanococcus maripaludis (strain

Query: 3 VNKAQDG 9
VNK QDG
Sbjct: 83 VNKKQDG 89


>sp|RL24_METM7|LARGE ribosomal subunit protein uL24|Methanococcus maripaludis (strain

Query: 3 VNKAQDG 9
VNK QDG
Sbjct: 83 VNKKQDG 89


>sp|RL24_METM5|LARGE ribosomal subunit protein uL24|Methanococcus maripaludis (strain

Query: 3 VNKAQDG 9
VNK QDG
Sbjct: 83 VNKKQDG 89




227|Sequence|1131|1140|AQDGFTQWCE

>sp|RS8_HALSA|SMALL ribosomal subunit protein uS8|Halobacterium salinarum (strain

Query: 3 DGFTQW 8
DGF QW
Sbjct: 84 DGFEQW 89


>sp|RS8_HALS3|SMALL ribosomal subunit protein uS8|Halobacterium salinarum (strain

Query: 3 DGFTQW 8
DGF QW
Sbjct: 84 DGFEQW 89


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 1 AQDGFTQWCE 10
A+D F +W +
Sbjct: 47 AEDAFKRWSD 56


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QDGFTQWC 9
+ G T WC
Sbjct: 230 KQGLTDWC 237


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QDGFTQWC 9
+ G T WC
Sbjct: 226 KQGLTDWC 233


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QDGFTQWC 9
+ G T WC
Sbjct: 230 KQGLTDWC 237


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AQDGFTQWCE 10
A+D F +W E
Sbjct: 22 ARDEFIEWAE 31




228|Sequence|1136|1145|TQWCEQMLHA

>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 2 QWCEQML 8
+WCE+ML
Sbjct: 252 EWCERML 258


>sp|Y3539_METJA|UPF0252 protein MJECL39|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WCEQML 8
WCEQ+
Sbjct: 78 WCEQVF 83


>sp|Y541_PYRHO|UNCHARACTERIZED ATP-binding protein PH0541|Pyrococcus horikoshii (strain ATCC

Query: 2 QWCEQML 8
+WCE+ L
Sbjct: 247 EWCEREL 253


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC

Query: 3 WCEQMLH 9
W E++LH
Sbjct: 28 WIEEILH 34


>sp|RNZ_METAC|RIBONUCLEASE Z|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QWCEQMLHA 10
+W E+ +H+
Sbjct: 237 EWAEESMHS 245




229|Sequence|1141|1150|QMLHALNTAN

>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 QMLHALNTAN 10
++LHA++T N
Sbjct: 439 RVLHAMSTGN 448




230|Sequence|1146|1155|LNTANNLDVP

>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 5 NNLDVP 10
NNLDVP
Sbjct: 233 NNLDVP 238


>sp|RS3_METS5|SMALL ribosomal subunit protein uS3|Metallosphaera sedula (strain ATCC

Query: 3 TANNLDV 9
T NNLDV
Sbjct: 155 TGNNLDV 161


>sp|CHED_METM5|PROBABLE chemoreceptor glutamine deamidase CheD|Methanococcus maripaludis

Query: 2 NTANNLDV 9
N +NN+DV
Sbjct: 95 NNSNNIDV 102


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 4 ANNLDVP 10
A+N+DVP
Sbjct: 940 AHNIDVP 946




231|Sequence|1151|1160|NLDVPTFVSF

>sp|YBP2_ACIAM|UNCHARACTERIZED protein in bps2 5'region|Acidianus ambivalens (Desulfurolobus

Query: 1 NLDVPTFV 8
NLDVP F+
Sbjct: 55 NLDVPVFI 62


>sp|GLMS_SULAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfolobus acidocaldarius (strain

Query: 3 DVPTFVSF 10
D+P F+S+
Sbjct: 196 DIPAFLSY 203


>sp|ENGB_PYRHO|PROBABLE GTP-binding protein EngB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LDVPTFVS 9
LD+PT V+
Sbjct: 147 LDIPTIVA 154




232|Sequence|1156|1165|TFVSFLKEVE

>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 FVSFLKEVE 10
FVSFLK V+
Sbjct: 529 FVSFLKSVD 537


>sp|DPHB_METBF|DIPHTHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VSFLKEVE 10
V F+KEVE
Sbjct: 259 VGFMKEVE 266


>sp|Y1666_METM7|UPF0285 protein MmarC7_1666|Methanococcus maripaludis (strain C7 /

Query: 4 SFLKEVE 10
SFLKE+E
Sbjct: 38 SFLKELE 44


>sp|Y962_METM5|UPF0285 protein MmarC5_0962|Methanococcus maripaludis (strain C5 /

Query: 4 SFLKEVE 10
SFLKE+E
Sbjct: 38 SFLKELE 44


>sp|Y247_METM6|UPF0285 protein MmarC6_0247|Methanococcus maripaludis (strain C6 /

Query: 4 SFLKEVE 10
SFLKE+E
Sbjct: 38 SFLKELE 44


>sp|Y642_METMP|UPF0285 protein MMP0642|Methanococcus maripaludis (strain DSM 14266

Query: 4 SFLKEVE 10
SFLKE+E
Sbjct: 38 SFLKELE 44




233|Sequence|1161|1170|LKEVESPYEV

>sp|PYRB_SULAC|ASPARTATE carbamoyltransferase catalytic subunit|Sulfolobus acidocaldarius

Query: 1 LKEVESPYEV 10
+KEVE+P+EV
Sbjct: 201 VKEVENPFEV 210


>sp|IF6_METBU|TRANSLATION initiation factor 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 LKEVESPYEV 10
LK+VE P EV
Sbjct: 79 LKDVEVPVEV 88


>sp|Y1677_METJA|UPF0056 membrane protein MJ1677|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KEVESPYEV 10
KE+E+ YE+
Sbjct: 101 KEIEAAYEI 109


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 5 ESPYEV 10
ESPYE+
Sbjct: 5498 ESPYEI 5503


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 KEVESPYEV 10
KE+ PYEV
Sbjct: 384 KEITKPYEV 392


>sp|T1SH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 1 LKEVESPY 8
LKEVE PY
Sbjct: 163 LKEVEIPY 170


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LKEVESPYE 9
L+EV +PYE
Sbjct: 252 LREVPAPYE 260


>sp|SECF_HALWD|PROTEIN-EXPORT membrane protein SecF|Haloquadratum walsbyi (strain DSM 16790

Query: 3 EVESPYEV 10
EV+S YEV
Sbjct: 116 EVQSAYEV 123


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LKEVESPYEV 10
+KE+E PY++
Sbjct: 114 IKELEDPYKL 123


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 KEVESPYEV 10
++VE+PY+V
Sbjct: 340 RKVETPYKV 348


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 VESPYEV 10
+ESPYE+
Sbjct: 471 LESPYEI 477


>sp|Y1294_PYRFU|UPF0200 protein PF1294|Pyrococcus furiosus (strain ATCC 43587

Query: 4 VESPYEV 10
V SPYEV
Sbjct: 89 VRSPYEV 95


>sp|PYRB_SACI6|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 3 EVESPYEV 10
E E+PY+V
Sbjct: 203 ETENPYDV 210


>sp|PYRB_SACI7|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 3 EVESPYEV 10
E E+PY+V
Sbjct: 203 ETENPYDV 210


>sp|PYRB_SACI2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 3 EVESPYEV 10
E E+PY+V
Sbjct: 203 ETENPYDV 210


>sp|PYRB_SACI1|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 3 EVESPYEV 10
E E+PY+V
Sbjct: 203 ETENPYDV 210


>sp|PYRB_SACI3|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 3 EVESPYEV 10
E E+PY+V
Sbjct: 203 ETENPYDV 210


>sp|THI4_AERPE|THIAMINE thiazole synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LKEVESPYE 9
L E+E PYE
Sbjct: 87 LDELEVPYE 95


>sp|PYRB_SACS2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus solfataricus

Query: 3 EVESPYEV 10
E E+PY+V
Sbjct: 203 ETENPYDV 210


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEVESPYEV 10
K +E PYEV
Sbjct: 129 KLIEHPYEV 137


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 5 ESPYEV 10
ESPYE+
Sbjct: 115 ESPYEI 120




234|Sequence|1166|1175|SPYEVHDYIR

>sp|SECE_HALLT|PROTEIN translocase subunit SecE|Halorubrum lacusprofundi (strain ATCC

Query: 2 PYEVHDYIR 10
PY+++ YIR
Sbjct: 4 PYDLNSYIR 12


>sp|KTHY_ARCFU|PROBABLE thymidylate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SPYEVHDYIR 10
SP+E DY+R
Sbjct: 142 SPFEKLDYLR 151


>sp|PIMT_META3|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PYEVHDY 8
P E+HDY
Sbjct: 38 PAELHDY 44


>sp|ASSY_PICTO|ARGININOSUCCINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 SPYEVHDY 8
SPY ++DY
Sbjct: 348 SPYSLYDY 355


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYEVHDYI 9
P EV DYI
Sbjct: 248 PLEVQDYI 255


>sp|G1PDH_THEVO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SPYEVH 6
SPYEVH
Sbjct: 61 SPYEVH 66


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YEVHDYIR 10
YEV D+IR
Sbjct: 254 YEVKDWIR 261


>sp|SECE_HALMA|PROTEIN translocase subunit SecE|Haloarcula marismortui (strain ATCC

Query: 2 PYEVHDYIR 10
PY++ YIR
Sbjct: 4 PYDLTSYIR 12


>sp|GGGPS_HYPBU|GERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 SPYEVHDYI 9
+PY++ +YI
Sbjct: 56 TPYDIDEYI 64


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 PYEVHDYIR 10
PYE H IR
Sbjct: 257 PYEEHGRIR 265


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 2 PYEVHDYI 9
PY++HD +
Sbjct: 282 PYDIHDVL 289


>sp|RL10E_METST|LARGE ribosomal subunit protein uL16|Methanosphaera stadtmanae (strain

Query: 2 PYEVHDYIR 10
PY DYIR
Sbjct: 4 PYTRKDYIR 12


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 SPYEVHDYIR 10
+PY+V D+I+
Sbjct: 344 TPYKVPDWIK 353


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 YEVHDYIR 10
YE+ DYIR
Sbjct: 443 YELADYIR 450


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 1 SPYEVHDY 8
+PYE DY
Sbjct: 94 TPYEDRDY 101


>sp|TMBL1_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 1 SPYEVHDYIR 10
+PYE +Y+R
Sbjct: 141 TPYEFLEYLR 150


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 2 PYEVHDY 8
PYE H Y
Sbjct: 320 PYETHGY 326


>sp|PSB_METKA|PROTEASOME subunit beta|Methanopyrus kandleri (strain AV19 /

Query: 3 YEVHDYI 9
+ +HDYI
Sbjct: 45 FRIHDYI 51


>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 4 EVHDYIR 10
++HDYI+
Sbjct: 203 QLHDYIK 209


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 4 EVHDYIR 10
++HDYI+
Sbjct: 203 QLHDYIK 209


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 3 YEVHDYI 9
YE H YI
Sbjct: 332 YEFHSYI 338


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 3 YEVHDYI 9
YE+HD I
Sbjct: 239 YEIHDKI 245


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 3 YEVHDYIR 10
Y V+DYI+
Sbjct: 1101 YNVNDYIK 1108


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 EVHDYIR 10
E HDY+R
Sbjct: 197 EDHDYLR 203


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PYEVHDY 8
PY +H Y
Sbjct: 303 PYTIHTY 309


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 4 EVHDYIR 10
++HDYI+
Sbjct: 200 QLHDYIK 206




235|Sequence|1171|1180|HDYIRAYLGD

>sp|MRE11_THEAC|DNA double-strand break repair protein|Thermoplasma acidophilum (strain

Query: 2 DYIRAYLGD 10
+Y RAYLGD
Sbjct: 329 EYFRAYLGD 337


>sp|IF6_HYPBU|TRANSLATION initiation factor 6|Hyperthermus butylicus (strain DSM 5456

Query: 2 DYIRAYLGD 10
DY+R ++GD
Sbjct: 80 DYLREHIGD 88


>sp|PFDA2_THEKO|PREFOLDIN subunit alpha 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HDYIRAYLGD 10
D IR+YLG+
Sbjct: 14 QDEIRSYLGE 23


>sp|GVPF_HALMT|GAS vesicle protein F|Haloferax mediterranei (strain ATCC 33500

Query: 1 HDYIRAYLGD 10
HD IRA +GD
Sbjct: 128 HDAIRADIGD 137


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HDYIRAYLGD 10
D++R YLG+
Sbjct: 197 QDWLREYLGE 206


>sp|RS8_METS5|SMALL ribosomal subunit protein uS8|Metallosphaera sedula (strain ATCC

Query: 2 DYIRAYL 8
DYIR YL
Sbjct: 91 DYIRRYL 97


>sp|RS8_SACI7|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 2 DYIRAYL 8
DYIR YL
Sbjct: 91 DYIRRYL 97


>sp|RS8_SACI6|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 2 DYIRAYL 8
DYIR YL
Sbjct: 91 DYIRRYL 97


>sp|RS8_SACI4|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 2 DYIRAYL 8
DYIR YL
Sbjct: 91 DYIRRYL 97


>sp|RS8_SACI3|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 2 DYIRAYL 8
DYIR YL
Sbjct: 91 DYIRRYL 97


>sp|RS8_SACI2|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 2 DYIRAYL 8
DYIR YL
Sbjct: 91 DYIRRYL 97


>sp|RS8_SACI1|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 2 DYIRAYL 8
DYIR YL
Sbjct: 91 DYIRRYL 97


>sp|RS8_SULAC|SMALL ribosomal subunit protein uS8|Sulfolobus acidocaldarius (strain

Query: 2 DYIRAYL 8
DYIR YL
Sbjct: 91 DYIRKYL 97


>sp|DADD_META3|5'-DEOXYADENOSINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 IRAYLG 9
IRAYLG
Sbjct: 134 IRAYLG 139


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DYIRAY 7
DY+RAY
Sbjct: 897 DYLRAY 902


>sp|CMR4_SACS2|CRISPR system CMR subunit Cmr4|Saccharolobus solfataricus (strain ATCC

Query: 1 HDYIRAYLGD 10
++YI++ LGD
Sbjct: 179 NEYIQSLLGD 188


>sp|PUR2_PYRFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HDYIRAYLGD 10
DY AY GD
Sbjct: 212 QDYPHAYEGD 221


>sp|PUR2_PYRAB|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 HDYIRAYLGD 10
DY AY GD
Sbjct: 211 QDYPHAYEGD 220


>sp|PUR2_PYRHO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HDYIRAYLGD 10
DY AY GD
Sbjct: 211 QDYPHAYEGD 220


>sp|RS8_SACS2|SMALL ribosomal subunit protein uS8|Saccharolobus solfataricus (strain

Query: 2 DYIRAYL 8
DY+R YL
Sbjct: 91 DYVRRYL 97


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 2 DYIRAYLG 9
D++R Y G
Sbjct: 264 DFVRGYFG 271


>sp|RS8_SULTO|SMALL ribosomal subunit protein uS8|Sulfurisphaera tokodaii (strain DSM

Query: 2 DYIRAYL 8
DY+R YL
Sbjct: 91 DYVRRYL 97


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DYIRAYLGD 10
DY R + GD
Sbjct: 111 DYARIFYGD 119


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HDYIRAYLGD 10
DY AY GD
Sbjct: 210 QDYPHAYEGD 219


>sp|Y1463_THESM|UPF0127 protein TSIB_1463|Thermococcus sibiricus (strain DSM 12597

Query: 2 DYIRAYLGD 10
DY+ A +GD
Sbjct: 102 DYLNAEIGD 110


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 HDYIRAYLGD 10
HD + A LGD
Sbjct: 389 HDRLTALLGD 398


>sp|RS24_THEKO|SMALL ribosomal subunit protein eS24|Thermococcus kodakarensis (strain

Query: 3 YIRAYLG 9
YIR+Y G
Sbjct: 55 YIRSYFG 61


>sp|RS24_THESM|SMALL ribosomal subunit protein eS24|Thermococcus sibiricus (strain DSM

Query: 3 YIRAYLG 9
YIR+Y G
Sbjct: 55 YIRSYFG 61


>sp|PCNA_METPE|DNA polymerase sliding clamp|Methanosphaerula palustris (strain ATCC

Query: 2 DYIRAYLGD 10
D+IR LGD
Sbjct: 172 DHIRLELGD 180


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 HDYIRAYLG 9
H+Y R Y G
Sbjct: 127 HEYARMYKG 135


>sp|RS24_THEGJ|SMALL ribosomal subunit protein eS24|Thermococcus gammatolerans (strain

Query: 3 YIRAYLG 9
YIR+Y G
Sbjct: 55 YIRSYFG 61


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 IRAYLGD 10
I AYLGD
Sbjct: 368 IEAYLGD 374


>sp|PHR_METTM|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 HDYIRAYLG 9
H Y+R Y G
Sbjct: 353 HGYMRMYWG 361


>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HDYIRAYLG 9
H+Y R Y G
Sbjct: 124 HEYARIYNG 132


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DYIRAYLGD 10
DY++ +GD
Sbjct: 238 DYVKGLVGD 246




236|Sequence|1176|1185|AYLGDTSEAK

>sp|PURA_METVS|ADENYLOSUCCINATE synthetase|Methanococcus vannielii (strain ATCC 35089

Query: 2 YLGDTSEA 9
YLGD SEA
Sbjct: 155 YLGDVSEA 162


>sp|PURA_METM7|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C7 /

Query: 2 YLGDTSEA 9
YLGD SEA
Sbjct: 155 YLGDVSEA 162


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 2 YLGDTSEA 9
YLGD SEA
Sbjct: 155 YLGDVSEA 162


>sp|Y1492_METJA|UNCHARACTERIZED protein MJ1492|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AYLGDTS 7
AYLG+TS
Sbjct: 26 AYLGETS 32


>sp|RNZ_AERPE|RIBONUCLEASE Z|Aeropyrum pernix (strain ATCC 700893

Query: 1 AYLGDTS 7
AY GDTS
Sbjct: 211 AYTGDTS 217


>sp|GCST_AERPE|PROBABLE aminomethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AYLGDTSE 8
AY+GDT E
Sbjct: 344 AYIGDTIE 351


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AYLGDTS 7
+Y+GDTS
Sbjct: 1096 SYVGDTS 1102




237|Sequence|1181|1190|TSEAKEFAKQ

>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 3 EAKEFAK 9
EAK+FAK
Sbjct: 51 EAKDFAK 57




238|Sequence|1186|1195|EFAKQFLERR

>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 3 AKQFLERR 10
AK+FLER+
Sbjct: 528 AKEFLERK 535


>sp|CDPAS_METMJ|CDP-ARCHAEOL synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EFAKQFLERR 10
+ AK FL+RR
Sbjct: 87 DLAKSFLKRR 96


>sp|PIMT_PYRFU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EFAKQFLER 9
EFAK+ LER
Sbjct: 118 EFAKRNLER 126


>sp|PIMT_PYRHO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EFAKQFLER 9
EFAK+ LER
Sbjct: 118 EFAKRNLER 126


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EFAKQFLERR 10
EFA++ +E+R
Sbjct: 44 EFAQKLIEKR 53


>sp|PIMT_PYRAB|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 EFAKQFLER 9
EFAK+ LER
Sbjct: 114 EFAKRNLER 122


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 3 AKQFLER 9
AK+FLER
Sbjct: 531 AKEFLER 537


>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 1 EFAKQFLER 9
E AK+FLER
Sbjct: 219 EEAKKFLER 227


>sp|IDI2_THESM|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus sibiricus (strain DSM 12597

Query: 2 FAKQFLERR 10
FA+++LE+R
Sbjct: 354 FAREWLEQR 362


>sp|HIS1_SULTO|ATP phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 AKQFLERR 10
AKQ+LE++
Sbjct: 122 AKQYLEKK 129


>sp|Y1161_ARCFU|UNCHARACTERIZED protein AF_1161|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EFAKQFLERR 10
E ++FLERR
Sbjct: 5 ELVRRFLERR 14


>sp|PIMT_STAMF|PROTEIN-L-ISOASPARTATE O-methyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 EFAKQFLER 9
EFAK+ LER
Sbjct: 123 EFAKKNLER 131


>sp|KTHY_METKA|PROBABLE thymidylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 FAKQFLER 9
F K+FLER
Sbjct: 129 FDKEFLER 136


>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FAKQFLER 9
FAK+ LER
Sbjct: 136 FAKKLLER 143


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 FAKQFLER 9
FAK+ LER
Sbjct: 136 FAKKLLER 143


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EFAKQFLER 9
E+A+++LER
Sbjct: 397 EYARRWLER 405


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EFAKQFLE 8
EFAK+F++
Sbjct: 39 EFAKKFIK 46




239|Sequence|1191|1200|FLERRAKQKA

>sp|VORB_PYRFU|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FLERRAKQK 9
FLE+R K+K
Sbjct: 169 FLEKRHKKK 177


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 1 FLERRAKQK 9
FLE+R K+K
Sbjct: 169 FLEKRHKKK 177


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 1 FLERRAKQKA 10
F+ER+A++K
Sbjct: 212 FIERKAQRKG 221




240|Sequence|1196|1205|AKQKANQQRQ

***** No hits found ******


241|Sequence|1201|1210|NQQRQQQQLP

***** No hits found ******


242|Sequence|1206|1215|QQQLPQQQQQ

***** No hits found ******


243|Sequence|1211|1220|QQQQQQPPQQ

***** No hits found ******


244|Sequence|1216|1225|QPPQQPPQQP

>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PPQQPPQQP 10
PP++ P++P
Sbjct: 204 PPEKAPEEP 212


>sp|DNAG_THEAC|DNA primase DnaG|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QPPQQPPQ 8
+PP+QPP+
Sbjct: 323 EPPEQPPK 330


Query: 4 QQPPQQP 10
++PP+QP
Sbjct: 322 EEPPEQP 328


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QPPQQPPQQP 10
Q P PP+QP
Sbjct: 455 QEPGNPPEQP 464


Query: 2 PPQQPPQQP 10
PP+QP +P
Sbjct: 460 PPEQPSTEP 468


>sp|NCPP_PYRNV|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum neutrophilum

Query: 1 QPPQQPPQ 8
+PP PPQ
Sbjct: 34 KPPSLPPQ 41


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QPPQQPPQ 8
QPP +PP+
Sbjct: 199 QPPVKPPE 206


>sp|ASD_METKA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanopyrus kandleri

Query: 2 PPQQPPQQP 10
PP++PP P
Sbjct: 45 PPREPPSDP 53


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPQQPPQQ 9
PP +PP Q
Sbjct: 372 PPAKPPSQ 379




245|Sequence|1221|1230|PPQQPQQQDS

>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PPQQPQQQD 9
PP PQ++D
Sbjct: 410 PPGTPQEED 418


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 1 PPQQPQQQD 9
PPQ PQ D
Sbjct: 320 PPQSPQPAD 328




246|Sequence|1226|1235|QQQDSVWGMN

>sp|Y1942_ARCFU|UNCHARACTERIZED protein AF_1942|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QQQDSVWG 8
QQ+D WG
Sbjct: 12 QQEDESWG 19


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 1 QQQDSVWG 8
++QDS WG
Sbjct: 583 RKQDSDWG 590


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QQQDSVWGMN 10
+ +D+VWG++
Sbjct: 532 KAEDTVWGLS 541


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 4 DSVWG 8
DSVWG
Sbjct: 311 DSVWG 315


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 3 QDSVWGM 9
+DS+WG+
Sbjct: 376 EDSLWGV 382




247|Sequence|1231|1240|VWGMNHSTLH

>sp|RL21_AERPE|LARGE ribosomal subunit protein eL21|Aeropyrum pernix (strain ATCC

Query: 2 WGMNHSTLH 10
WGM H H
Sbjct: 53 WGMPHRRFH 61


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VWGMNHSTLH 10
VWG+ T H
Sbjct: 378 VWGIGEETAH 387


>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 1 VWGMNHSTLH 10
VWG+ T H
Sbjct: 383 VWGIGDETAH 392


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 1 VWGMNHS 7
+WG++H+
Sbjct: 189 IWGLSHA 195


>sp|GFPS_AERPX|GERANYLFARNESYL diphosphate synthase|Aeropyrum pernix

Query: 2 WGMNH 6
WGM+H
Sbjct: 117 WGMSH 121


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 VWGMNHS 7
VW M HS
Sbjct: 33 VWTMRHS 39


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 GMNHSTLH 10
G+N +TLH
Sbjct: 335 GLNPATLH 342




248|Sequence|1236|1245|HSTLHSVFQT

>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HSTLHSV 7
HST+H+V
Sbjct: 445 HSTVHNV 451


>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 2 STLHSVFQT 10
S +H V+QT
Sbjct: 344 SEIHEVYQT 352


>sp|CDC63_HALSA|ORC1-TYPE DNA replication protein 3|Halobacterium salinarum (strain ATCC

Query: 2 STLHSVFQT 10
S +H V+QT
Sbjct: 32 SEIHEVYQT 40




249|Sequence|1241|1250|SVFQTNQSNN

>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 1 SVFQTNQSNN 10
++F+TNQ+ N
Sbjct: 269 TIFRTNQATN 278


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 1 SVFQTNQSNN 10
+VF+TNQ+ +
Sbjct: 247 AVFKTNQNTD 256




250|Sequence|1246|1255|NQSNNQQSNF

***** No hits found ******


251|Sequence|1251|1260|QQSNFEAVQS

***** No hits found ******


252|Sequence|1256|1265|EAVQSGKKKK

>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EAVQSGKKKK 10
EAV+SGK +K
Sbjct: 378 EAVKSGKIRK 387


>sp|RL1_ARCFU|LARGE ribosomal subunit protein uL1|Archaeoglobus fulgidus (strain ATCC

Query: 1 EAVQSGKKKK 10
EA+++GKK++
Sbjct: 14 EAIKNGKKRR 23


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EAVQSGKKK 9
EA++ GKK+
Sbjct: 245 EAIKEGKKE 253




253|Sequence|1261|1270|GKKKKKQKMV

>sp|ARCH_THEVO|PROTEIN archease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GKKKKKQKM 9
GK K+K+KM
Sbjct: 40 GKLKEKRKM 48




254|Sequence|1266|1275|KQKMVRADPS

>sp|HIS4_HALSA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Halobacterium salinarum (strain

Query: 1 KQKMVRADP 9
KQ+ VR DP
Sbjct: 177 KQEGVRTDP 185


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 1 KQKMVRADP 9
KQKMV+ P
Sbjct: 139 KQKMVKKPP 147


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 2 QKMVRADPS 10
QK++ DPS
Sbjct: 320 QKVIHRDPS 328




255|Sequence|1271|1280|RADPSLLGFS

>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RADPSLLGFS 10
RA PSL+GFS
Sbjct: 164 RAQPSLVGFS 173


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RADPSLLGFS 10
RA PSL+GFS
Sbjct: 166 RAQPSLVGFS 175


>sp|PGK_PYRHO|PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RADPSLLGFS 10
R+ PSL+GF+
Sbjct: 154 RSQPSLVGFA 163


>sp|PGK_PYRAB|PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 RADPSLLGFS 10
R+ PSL+GF+
Sbjct: 154 RSQPSLVGFA 163


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 1 RADPSLLGFS 10
R+ PSL+GF+
Sbjct: 160 RSQPSLVGFA 169


>sp|PGK_THESM|PHOSPHOGLYCERATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 RADPSLLGFS 10
R+ PSL+GF+
Sbjct: 154 RSQPSLVGFA 163


>sp|PGK_PYRWO|PHOSPHOGLYCERATE kinase|Pyrococcus woesei

Query: 1 RADPSLLGFS 10
R+ PSL+GF+
Sbjct: 154 RSQPSLVGFA 163


>sp|PGK_PYRFU|PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RADPSLLGFS 10
R+ PSL+GF+
Sbjct: 154 RSQPSLVGFA 163


>sp|PGK_METFV|PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 1 RADPSLLGF 9
R+ PSL+GF
Sbjct: 159 RSQPSLVGF 167


>sp|PGK_THEKO|PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RADPSLLGFS 10
R+ PSL+GF+
Sbjct: 154 RSQPSLVGFA 163


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RADPSLLGFS 10
R+ PSL+GF+
Sbjct: 165 RSQPSLVGFA 174


>sp|PGK_SULAC|PHOSPHOGLYCERATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RADPSLLGF 9
R+ PSL+GF
Sbjct: 164 RSQPSLVGF 172


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 1 RADPSLLGFS 10
R PS++GFS
Sbjct: 34 RTTPSVVGFS 43


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RADPSLLGFS 10
R PS++GFS
Sbjct: 34 RTTPSVVGFS 43


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DPSLLGF 9
DPS+LGF
Sbjct: 121 DPSVLGF 127


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 RADPSLLGFS 10
R PS++GFS
Sbjct: 34 RTTPSVVGFS 43


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RADPSLLGFS 10
R PS++GFS
Sbjct: 34 RTTPSVVGFS 43


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RADPSLLGF 9
R+ PSL+GF
Sbjct: 164 RSQPSLVGF 172


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 1 RADPSLLGFS 10
R PS++GFS
Sbjct: 34 RTTPSVVGFS 43


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 3 DPSLLGF 9
DPS+LGF
Sbjct: 122 DPSVLGF 128


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 1 RADPSLLGFS 10
R PS++GFS
Sbjct: 34 RTTPSVVGFS 43


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 DPSLLGF 9
DPS+LGF
Sbjct: 121 DPSVLGF 127


>sp|PGK_HALSA|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RADPSLLGF 9
R+ PSL+GF
Sbjct: 157 RSQPSLVGF 165


>sp|PGK_HALS3|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RADPSLLGF 9
R+ PSL+GF
Sbjct: 157 RSQPSLVGF 165


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 RADPSLLGFS 10
R PSL GF+
Sbjct: 43 RVQPSLKGFT 52


>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RADPSLL 7
R DPSLL
Sbjct: 200 RGDPSLL 206


>sp|PGK_SACS2|PHOSPHOGLYCERATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RADPSLLGF 9
R+ PS++GF
Sbjct: 160 RSQPSIVGF 168


>sp|TYW3_SACS2|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 DPSLLGF 9
DP +LGF
Sbjct: 25 DPDILGF 31


>sp|LEU1_PYRAB|2-ISOPROPYLMALATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 DPSLLGFS 10
DP LGFS
Sbjct: 314 DPKKLGFS 321


>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RADPSLLG 8
RADP L+G
Sbjct: 42 RADPVLVG 49


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 3 DPSLLGF 9
DP++LGF
Sbjct: 120 DPTVLGF 126


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 RADPSLLGFS 10
R PSL GF+
Sbjct: 43 RVQPSLRGFT 52


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DPSLLGF 9
DP++LGF
Sbjct: 123 DPTVLGF 129


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 ADPSLLG 8
ADP++LG
Sbjct: 241 ADPTMLG 247


>sp|PGK_PYRAE|PHOSPHOGLYCERATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RADPSLLGF 9
R+ PS++GF
Sbjct: 163 RSQPSVVGF 171


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DPSLLGFS 10
DP LGFS
Sbjct: 315 DPRKLGFS 322


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DPSLLGF 9
DP++LGF
Sbjct: 120 DPAVLGF 126


>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 1 RADPSLLGFS 10
R DP L+G S
Sbjct: 381 RDDPKLIGSS 390


>sp|RNP1_SULTO|RIBONUCLEASE P protein component 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ADPSLLG 8
+DPSL+G
Sbjct: 15 SDPSLIG 21


>sp|MCRD_METBF|METHYL-COENZYME M reductase operon protein|Methanosarcina barkeri (strain Fusaro /

Query: 2 ADPSLLG 8
ADP LLG
Sbjct: 137 ADPRLLG 143


>sp|PGK_NATPD|PHOSPHOGLYCERATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RADPSLLGF 9
R+ PS++GF
Sbjct: 155 RSQPSVVGF 163


>sp|SRP54_METMA|SIGNAL recognition particle 54 kDa|Methanosarcina mazei (strain ATCC

Query: 2 ADPSLLGFS 10
ADP L+G S
Sbjct: 385 ADPKLIGGS 393


>sp|PYRH_METAC|URIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DPSLLG 8
DPSLLG
Sbjct: 205 DPSLLG 210


>sp|F16PA_HALSA|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 ADPSLLGF 9
ADP++ GF
Sbjct: 162 ADPTVYGF 169


>sp|F16PA_HALS3|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 29341

Query: 2 ADPSLLGF 9
ADP++ GF
Sbjct: 162 ADPTVYGF 169


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ADPSLLG 8
DPSLLG
Sbjct: 200 GDPSLLG 206


>sp|Y2143_SULTO|UPF0284 protein STK_21430|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ADPSLLGFS 10
+DP LLG S
Sbjct: 212 SDPMLLGVS 220




256|Sequence|1276|1285|LLGFSVNASS

>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LLGFSVNASS 10
L GFS NA+S
Sbjct: 116 LAGFSFNAAS 125




257|Sequence|1281|1290|VNASSERLNM

>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 1 VNASSERL 8
VNA+SERL
Sbjct: 262 VNAASERL 269




258|Sequence|1286|1299|ERLNMGEIETLDDY

>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 4 NMGEIETLDDY 14
N+G I+ LDDY
Sbjct: 26 NLGLIKILDDY 36


>sp|Y1159_THEAC|UPF0179 protein Ta1159|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ERLNMGEIETLDDY 14
+++N E+E L+DY
Sbjct: 66 DKVNTVEVEELEDY 79


>sp|RS5_CENSY|SMALL ribosomal subunit protein uS5|Cenarchaeum symbiosum (strain A)

Query: 1 ERLNMGEIETLDD 13
+R+N GEI +L++
Sbjct: 35 KRVNAGEITSLEE 47


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 3 LNMGEIETLDDY 14
LN G +E L++Y
Sbjct: 565 LNAGTVEALEEY 576


>sp|RADA_DESA1|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 1 ERLNMGEIET 10
ERLN+G+I T
Sbjct: 86 ERLNIGKITT 95


>sp|RRP42_THEKO|EXOSOME complex component Rrp42|Thermococcus kodakarensis (strain ATCC

Query: 6 GEIETLDDY 14
GE+E LD+Y
Sbjct: 176 GEVEILDEY 184


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERLNMGEIETLD 12
ERL + E ET+D
Sbjct: 239 ERLKVTECETVD 250


>sp|G6PI_HALMA|PROBABLE glucose-6-phosphate isomerase|Haloarcula marismortui (strain ATCC

Query: 1 ERLNMGEIETL 11
ERL +GE E+L
Sbjct: 426 ERLRIGETESL 436


>sp|Y1250_THEVO|UPF0179 protein TV1250|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ERLNMGEIETLDDY 14
+++N E+E L+D+
Sbjct: 63 DKVNTVEVEELEDF 76


>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 1 ERLNMGEIETL 11
ERLN+GE +
Sbjct: 366 ERLNLGEFDAF 376


>sp|RS8_PYRAE|SMALL ribosomal subunit protein uS8|Pyrobaculum aerophilum (strain ATCC

Query: 5 MGEIETLDD 13
+GEIE +DD
Sbjct: 47 VGEIEYIDD 55


>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERLNMGEIETLDDY 14
ER + GEIE D Y
Sbjct: 108 ERADGGEIEYYDRY 121


>sp|FLPA_METMJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanoculleus marisnigri (strain

Query: 1 ERLNMGEIETLDDY 14
ERL++ ++ LD Y
Sbjct: 174 ERLDIADVRWLDPY 187


>sp|RS8_PYRIL|SMALL ribosomal subunit protein uS8|Pyrobaculum islandicum (strain DSM

Query: 5 MGEIETLDD 13
+GEIE +DD
Sbjct: 47 VGEIEYIDD 55


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 1 ERLNMGEIETLDDY 14
+R +GE TLDD+
Sbjct: 14 DRAKVGEKCTLDDW 27


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 1 ERLNMGEIETLDDY 14
+R +GE TLDD+
Sbjct: 14 DRAKVGEKCTLDDW 27


>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ERLNMGEIETLDD 13
ER+ GE+E DD
Sbjct: 355 ERIAAGELEGWDD 367


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ERLNMGEIETLDD 13
ER+ GE+E DD
Sbjct: 355 ERIAAGELEGWDD 367


>sp|RS8_PYRCJ|SMALL ribosomal subunit protein uS8|Pyrobaculum calidifontis (strain

Query: 5 MGEIETLDD 13
+GEIE +DD
Sbjct: 47 VGEIEYIDD 55


>sp|RRP42_PYRAB|EXOSOME complex component Rrp42|Pyrococcus abyssi (strain GE5 /

Query: 6 GEIETLDD 13
GE+ETLD+
Sbjct: 176 GEVETLDE 183


>sp|RS8_PYRAR|SMALL ribosomal subunit protein uS8|Pyrobaculum arsenaticum (strain DSM

Query: 5 MGEIETLDD 13
+GEIE +DD
Sbjct: 47 VGEIEYVDD 55


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RLNMGEI 8
RLN+GEI
Sbjct: 417 RLNLGEI 423


>sp|RRP42_THEON|EXOSOME complex component Rrp42|Thermococcus onnurineus (strain NA1)

Query: 6 GEIETLDDY 14
GE++ LD+Y
Sbjct: 176 GEVQILDEY 184


>sp|RS8_PYRNV|SMALL ribosomal subunit protein uS8|Pyrobaculum neutrophilum (strain

Query: 5 MGEIETLDD 13
+GE+E +DD
Sbjct: 47 VGEVEYIDD 55


>sp|ARLY_HALSA|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 700922

Query: 4 NMGEIETLDDY 14
N G +E DDY
Sbjct: 259 NRGFVEVSDDY 269


>sp|ARLY_HALS3|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 29341

Query: 4 NMGEIETLDDY 14
N G +E DDY
Sbjct: 259 NRGFVEVSDDY 269


>sp|K6PF_PYRHO|ADP-SPECIFIC phosphofructokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RLNMGEIETLDDY 14
R ++G+I DDY
Sbjct: 369 RASLGDIRGPDDY 381


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 RLNMGEIETLDDY 14
+LN E+ET D+
Sbjct: 375 KLNGAEMETYHDH 387


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ERLNMGEIETLDDY 14
E++ G+++T+D +
Sbjct: 215 EKVEAGDVKTIDSF 228


>sp|SRP54_ACIAM|SIGNAL recognition particle 54 kDa|Acidianus ambivalens (Desulfurolobus

Query: 3 LNMGEIETL 11
L MG+IET+
Sbjct: 294 LGMGDIETI 302


>sp|Y1455_METJA|UNCHARACTERIZED protein MJ1455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NMGEIETLDD 13
N+GE TLD+
Sbjct: 127 NIGEFGTLDE 136


>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 1 ERLNMGEIETLDDY 14
E +N+G+ + D+Y
Sbjct: 242 EDINLGDYQNADEY 255


>sp|SRP54_METS3|SIGNAL recognition particle 54 kDa|Methanobrevibacter smithii (strain ATCC

Query: 3 LNMGEIETL 11
L MG+I+TL
Sbjct: 291 LGMGDIQTL 299


>sp|RS2_PYRFU|SMALL ribosomal subunit protein uS2|Pyrococcus furiosus (strain ATCC

Query: 4 NMGEIETLDDY 14
N GEI++ +D+
Sbjct: 178 NRGEIQSREDF 188


>sp|HEM2_METTH|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermobacter thermautotrophicus (strain

Query: 1 ERLNMGEIETLD 12
E+L G++E +D
Sbjct: 43 EKLGRGDVEAID 54


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 ERLNMGEIETL 11
+ L MG +ETL
Sbjct: 305 QNLQMGAVETL 315


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ERLNMGEIETLDD 13
E+LN+G + L D
Sbjct: 467 EKLNVGSVLRLKD 479


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 7 EIETLDDY 14
E+ETLD Y
Sbjct: 597 ELETLDSY 604


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 8 IETLDDY 14
ETLDDY
Sbjct: 163 FETLDDY 169


>sp|Y1169_SACI6|UPF0200 protein M164_1169|Saccharolobus islandicus (strain M.16.4 /

Query: 2 RLNMGEIETLDDY 14
+L +GE+ + DY
Sbjct: 150 KLGIGEVIAMADY 162


>sp|Y1675_SACI1|UPF0200 protein YN1551_1675|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 RLNMGEIETLDDY 14
+L +GE+ + DY
Sbjct: 150 KLGIGEVIAMADY 162


>sp|Y1277_SACI2|UPF0200 protein LS215_1277|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 RLNMGEIETLDDY 14
+L +GE+ + DY
Sbjct: 150 KLGIGEVIAMADY 162


>sp|Y1244_SACI3|UPF0200 protein M1627_1244|Saccharolobus islandicus (strain M.16.27)

Query: 2 RLNMGEIETLDDY 14
+L +GE+ + DY
Sbjct: 150 KLGIGEVIAMADY 162


>sp|Y1180_SACI4|UPF0200 protein M1425_1180|Saccharolobus islandicus (strain M.14.25 /

Query: 2 RLNMGEIETLDDY 14
+L +GE+ + DY
Sbjct: 150 KLGIGEVIAMADY 162


>sp|Y1176_SACI7|UPF0200 protein YG5714_1176|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 RLNMGEIETLDDY 14
+L +GE+ + DY
Sbjct: 150 KLGIGEVIAMADY 162


>sp|Y1041_SACS2|UPF0200 protein SSO1041|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RLNMGEIETLDDY 14
+L +GE+ + DY
Sbjct: 150 KLGIGEVIAMADY 162


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 7 EIETLDDY 14
E ET+DDY
Sbjct: 190 ERETIDDY 197


>sp|RL15_METVS|LARGE ribosomal subunit protein uL15|Methanococcus vannielii (strain

Query: 1 ERLNMGEIE 9
E +N+GE+E
Sbjct: 71 ETINVGELE 79


>sp|RL15_METVA|LARGE ribosomal subunit protein uL15|Methanococcus vannielii

Query: 1 ERLNMGEIE 9
E +N+GE+E
Sbjct: 71 ETINVGELE 79


>sp|RL15_METMP|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 1 ERLNMGEIE 9
E +N+GE+E
Sbjct: 71 ETINIGELE 79


>sp|TRPE_SACS2|ANTHRANILATE synthase component 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LNMGEIETLDDY 14
+ M IETL++Y
Sbjct: 341 MAMNIIETLEEY 352


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RLNMGEIETLD 12
RL GE+ET++
Sbjct: 336 RLGEGELETVE 346


>sp|RGYRA_METKA|REVERSE gyrase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 RLNMGEIETLDDY 14
RL +G++E L+ +
Sbjct: 234 RLEIGDVEVLERH 246


>sp|RL15_METJA|LARGE ribosomal subunit protein uL15|Methanocaldococcus jannaschii

Query: 1 ERLNMGEIETL 11
E +N+GE+E +
Sbjct: 71 ETINVGELEEI 81






THE END