FXRD1_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|MGHPLVRRIM

>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 1 MGHPLVRRIM 10
+ HP+++RIM
Sbjct: 362 LNHPIIKRIM 371


>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MGHPLVRRIM 10
M HP ++RIM
Sbjct: 145 MYHPALKRIM 154


>sp|TRPD_PYRAB|ANTHRANILATE phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 MGHPLVRRIM 10
M HP ++RIM
Sbjct: 145 MYHPALKRIM 154


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 HPLVRR 8
HPL+RR
Sbjct: 46 HPLIRR 51


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 HPLVRR 8
HPL+RR
Sbjct: 46 HPLIRR 51


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HPLVRRIM 10
HPL+RR++
Sbjct: 482 HPLIRRML 489


>sp|THIM_METB6|HYDROXYETHYLTHIAZOLE kinase|Methanoregula boonei (strain DSM 21154

Query: 2 GHPLVRRI 9
GHPL+ RI
Sbjct: 185 GHPLMGRI 192


>sp|RS3_METJA|SMALL ribosomal subunit protein uS3|Methanocaldococcus jannaschii (strain

Query: 1 MGHPLVRRIM 10
+GH VRR+M
Sbjct: 111 VGHTAVRRVM 120


>sp|MFNA_METVS|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus vannielii

Query: 3 HPLVRRI 9
HPL R+I
Sbjct: 34 HPLTRKI 40


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 GHPLVR 7
GHP++R
Sbjct: 526 GHPVIR 531


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 GHPLVR 7
GHP++R
Sbjct: 526 GHPVIR 531


>sp|THIM_NATPD|HYDROXYETHYLTHIAZOLE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GHPLVRRIM 10
GHPL+ +I+
Sbjct: 189 GHPLMAQIV 197


>sp|CBIM2_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain Fusaro

Query: 1 MGHPLVRRI 9
+G PLVR++
Sbjct: 222 IGEPLVRKL 230


>sp|MFNA_METTH|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothermobacter

Query: 3 HPLVRRI 9
HPL RR+
Sbjct: 17 HPLARRV 23


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 MGHPLV 6
+GHPL+
Sbjct: 222 LGHPLI 227


>sp|MOBA_NATPD|PROBABLE molybdenum cofactor guanylyltransferase|Natronomonas pharaonis

Query: 2 GHPLVRRI 9
G PLVRR+
Sbjct: 29 GVPLVRRV 36


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 MGHPLVRRIM 10
+GH L RRI+
Sbjct: 38 LGHLLKRRII 47


>sp|Y1268_ARCFU|UNCHARACTERIZED protein AF_1268|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MGHPLVRRIM 10
+G PL RRI+
Sbjct: 115 LGTPLRRRIL 124


>sp|SECY_AERPE|PROTEIN translocase subunit SecY|Aeropyrum pernix (strain ATCC 700893

Query: 3 HPLVRRIM 10
+PL+RRI+
Sbjct: 445 YPLLRRIL 452


>sp|END4_METMJ|PROBABLE endonuclease 4|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 HPLVRRI 9
HP VRR+
Sbjct: 249 HPAVRRL 255




2|SequenceR|15|6|LLGRGMGHPL

>sp|GLMS_SULAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfolobus acidocaldarius (strain

Query: 2 LGRGMGHPL 10
LGRGM PL
Sbjct: 458 LGRGMSLPL 466


>sp|METK_METM6|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C6 /

Query: 4 RGMGHP 9
+GMGHP
Sbjct: 25 KGMGHP 30


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 GMGHPL 10
G+GHPL
Sbjct: 221 GLGHPL 226


>sp|NFI_SULAC|ENDONUCLEASE V|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GRGMGHP 9
G GM HP
Sbjct: 99 GHGMAHP 105


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 1 LLGRGMGHP 9
+GRG G+P
Sbjct: 475 FIGRGPGYP 483


>sp|GATD_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma acidophilum (strain ATCC

Query: 1 LLGRGMGH 8
+LG G+GH
Sbjct: 303 ILGTGLGH 310


>sp|METK_SACS2|S-ADENOSYLMETHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGLGHP 30


>sp|METK_SACI7|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGLGHP 30


>sp|METK_SACI6|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGLGHP 30


>sp|METK_SACI4|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGLGHP 30


>sp|METK_SACI3|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGLGHP 30


>sp|METK_SACI2|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGLGHP 30


>sp|METK_SACI1|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGLGHP 30


>sp|METK_NATPD|S-ADENOSYLMETHIONINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 27 KGLGHP 32


>sp|METK_METTP|S-ADENOSYLMETHIONINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGLGHP 31


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGLGHP 30


>sp|METK_HALSA|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 27 KGLGHP 32


>sp|METK_HALS3|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 27 KGLGHP 32


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGLGHP 31


>sp|SIHH_METTH|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 RGMGHP 9
RG GHP
Sbjct: 344 RGQGHP 349


>sp|RL4_NATPD|LARGE ribosomal subunit protein uL4|Natronomonas pharaonis (strain ATCC

Query: 3 GRGMGH 8
GRGM H
Sbjct: 64 GRGMAH 69


>sp|RL4_HALWD|LARGE ribosomal subunit protein uL4|Haloquadratum walsbyi (strain DSM

Query: 3 GRGMGH 8
GRGM H
Sbjct: 64 GRGMAH 69


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 LLGRGMGHPL 10
L+GRG+G L
Sbjct: 350 LMGRGLGAQL 359


>sp|ENO_METVS|ENOLASE vannielii (strain ATCC 35089

Query: 3 GRGMGHPL 10
GRG GH +
Sbjct: 32 GRGYGHAI 39


>sp|METK_CALMQ|S-ADENOSYLMETHIONINE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGLGHP 31


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GRGMGH 8
GRG GH
Sbjct: 268 GRGQGH 273


>sp|METK_THEVO|S-ADENOSYLMETHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGIGHP 31


>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 29 KGIGHP 34


>sp|METK_THEKO|S-ADENOSYLMETHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 29 KGIGHP 34


>sp|METK_THEGJ|S-ADENOSYLMETHIONINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 29 KGIGHP 34


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGIGHP 31


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGIGHP 31


>sp|METK_PYRAB|S-ADENOSYLMETHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGIGHP 31


>sp|METK_PICTO|S-ADENOSYLMETHIONINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 30 KGIGHP 35


>sp|METK_METVS|S-ADENOSYLMETHIONINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGIGHP 30


>sp|METK_METTM|S-ADENOSYLMETHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGIGHP 30


>sp|METK_METTH|S-ADENOSYLMETHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGIGHP 30


>sp|METK_METST|S-ADENOSYLMETHIONINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGIGHP 30


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGIGHP 30


>sp|METK_METMP|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGIGHP 30


>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGIGHP 30


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGIGHP 31


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGIGHP 30


>sp|METK_METM5|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C5 /

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGIGHP 30


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGIGHP 31


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGIGHP 31


>sp|METK_META3|S-ADENOSYLMETHIONINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGIGHP 30


>sp|METK_HALWD|S-ADENOSYLMETHIONINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 27 KGIGHP 32


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 27 KGIGHP 32


>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 25 KGIGHP 30


>sp|RL4_HALSA|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain

Query: 3 GRGMGH 8
GRGM H
Sbjct: 64 GRGMAH 69


>sp|RL4_HALS3|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain

Query: 3 GRGMGH 8
GRGM H
Sbjct: 64 GRGMAH 69


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LGRGMGHP 9
LGR +G P
Sbjct: 107 LGRNLGRP 114


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 2 LGRGMGHPL 10
L G GHP+
Sbjct: 333 LAAGQGHPV 341


>sp|THIE_METAR|THIAMINE-PHOSPHATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LGRGMGHP 9
L RG+ HP
Sbjct: 13 LSRGLTHP 20


>sp|SAHH_HALSA|ADENOSYLHOMOCYSTEINASE salinarum (strain ATCC 700922

Query: 5 GMGHPL 10
G+GHP+
Sbjct: 353 GLGHPV 358


>sp|SAHH_HALS3|ADENOSYLHOMOCYSTEINASE salinarum (strain ATCC 29341

Query: 5 GMGHPL 10
G+GHP+
Sbjct: 353 GLGHPV 358


>sp|METK_SULAC|S-ADENOSYLMETHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGVGHP 31


>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGVGHP 31


>sp|METK_METKA|S-ADENOSYLMETHIONINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGVGHP 31


>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGVGHP 31


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 LLGRGMGHP 9
LLGR HP
Sbjct: 231 LLGRDKEHP 239


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 2 LGRGMGHPL 10
L G GHP+
Sbjct: 333 LAAGQGHPV 341


>sp|GATD_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma volcanium (strain ATCC

Query: 1 LLGRGMGH 8
++G G+GH
Sbjct: 303 IMGTGLGH 310


>sp|METK_AERPE|S-ADENOSYLMETHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 RGMGHP 9
+G+GHP
Sbjct: 26 KGLGHP 31


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LLGRGMGH 8
+ G GMGH
Sbjct: 306 IAGTGMGH 313


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 GMGHPL 10
G GHPL
Sbjct: 222 GAGHPL 227


>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LLGRGMGHPL 10
+G G+ HPL
Sbjct: 177 FIGSGIFHPL 186


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 5 GMGHPL 10
G GHPL
Sbjct: 226 GCGHPL 231


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 5 GMGHPL 10
G GHPL
Sbjct: 223 GAGHPL 228


>sp|IF2G_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 LLGRGMGHP 9
L+G +GHP
Sbjct: 322 LVGNVVGHP 330




3|SequenceR|20|11|GPRRTLLGRG

>sp|RSGA_METAC|SMALL ribosomal subunit biogenesis GTPase|Methanosarcina acetivorans

Query: 2 PRRTLLGRG 10
PRRT L RG
Sbjct: 101 PRRTCLSRG 109


>sp|RSGA_METMA|SMALL ribosomal subunit biogenesis GTPase|Methanosarcina mazei (strain

Query: 2 PRRTLLGRG 10
PR+T L RG
Sbjct: 97 PRKTCLSRG 105


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 2 PRRTLLGRG 10
PRR GRG
Sbjct: 71 PRRYYTGRG 79




4|SequenceR|25|16|GGRRTGPRRT

>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 2 GRRTGPRR 9
GRR P+R
Sbjct: 375 GRRNAPKR 382


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGRRTGPRR 9
GG+RTG R
Sbjct: 154 GGKRTGYMR 162


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 1 GGRRTGP 7
GG+R GP
Sbjct: 373 GGKRLGP 379


>sp|GAPN_THETE|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Thermoproteus tenax

Query: 1 GGRRTGP 7
GGRR GP
Sbjct: 365 GGRRLGP 371


>sp|RIBL_HALMD|FAD synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 3 RRTGPRR 9
RR GPR+
Sbjct: 116 RRAGPRK 122


>sp|Y3591_METAC|PROTEIN MA_3591|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GGRRTGPR 8
GGR GPR
Sbjct: 24 GGRVPGPR 31




5|SequenceR|30|21|WDLSFGGRRT

>sp|RFCS_METMJ|REPLICATION factor C small subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DLSFGGR 8
DLS GGR
Sbjct: 237 DLSIGGR 243


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 WDLSFGG 7
W + FGG
Sbjct: 696 WSIEFGG 702


>sp|DUT_METBU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanococcoides

Query: 1 WDLSFGGR 8
WD + GR
Sbjct: 117 WDAGYSGR 124




6|SequenceR|35|26|SVKGDWDLSF

>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii

Query: 3 KGDWDLSF 10
K DWDL+F
Sbjct: 85 KLDWDLAF 92


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SVKGDWDLS 9
S +GD+DLS
Sbjct: 333 SYRGDYDLS 341


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 SVKGDWDLS 9
+V DWD+S
Sbjct: 587 TVSTDWDMS 595


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 4 GDWDLSF 10
GDW L+F
Sbjct: 125 GDWGLAF 131


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 4 GDWDLSF 10
GDW L+F
Sbjct: 125 GDWGLAF 131


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 SVKGDWDLS 9
+V DWD+S
Sbjct: 607 TVSTDWDIS 615


>sp|TRPF_METAC|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 DWDLS 9
DWDLS
Sbjct: 169 DWDLS 173


>sp|TRPF1_METMA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 DWDLS 9
DWDLS
Sbjct: 165 DWDLS 169


>sp|G1PDH_METLZ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocorpusculum labreanum (strain ATCC

Query: 5 DWDLS 9
DWDLS
Sbjct: 192 DWDLS 196


>sp|PELO_HALMA|PROTEIN pelota homolog|Haloarcula marismortui (strain ATCC 43049

Query: 3 KGDWDL 8
+GDWD+
Sbjct: 306 EGDWDI 311


>sp|ACDD_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit delta|Archaeoglobus fulgidus

Query: 2 VKGDWDLSF 10
+KGD DL+F
Sbjct: 353 LKGDTDLNF 361


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KGDWDLS 9
+GD+DLS
Sbjct: 331 RGDYDLS 337


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 KGDWDLS 9
+GD+DLS
Sbjct: 331 RGDYDLS 337


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SVKGDWDLS 9
+VKG+W ++
Sbjct: 77 AVKGEWKIT 85


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 1 SVKGDWD 7
S GDWD
Sbjct: 176 SSNGDWD 182


>sp|DAPA_METPE|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 KGDWD 7
+GDWD
Sbjct: 225 EGDWD 229


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 4 GDWDL 8
GDWDL
Sbjct: 300 GDWDL 304


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 SVKGDW 6
+V+GDW
Sbjct: 643 AVRGDW 648


>sp|RS7_HALWD|SMALL ribosomal subunit protein uS7|Haloquadratum walsbyi (strain DSM

Query: 4 GDWDLS 9
G+WD+S
Sbjct: 49 GEWDVS 54


>sp|DTDA_IGNH4|D-AMINOACYL-TRNA deacylase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SVKGDWD 7
SVK DW+
Sbjct: 131 SVKEDWE 137


>sp|PANE_PYRAB|2-DEHYDROPANTOATE 2-reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 VKGDWDLS 9
VKG W LS
Sbjct: 89 VKGSWVLS 96


>sp|Y136_ARCFU|UNCHARACTERIZED protein AF_0136|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KGDWDL 8
KG+WD+
Sbjct: 163 KGEWDV 168


>sp|MTHZ_METTF|TYPE II methyltransferase M.MthZI|Methanothermobacter thermautotrophicus

Query: 1 SVKGDWDL 8
S+ GDW L
Sbjct: 230 SIMGDWVL 237


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VKGDWDLSF 10
VKG W L++
Sbjct: 450 VKGQWFLNY 458


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SVKGDWDLS 9
S+K DW +S
Sbjct: 403 SIKMDWPIS 411


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VKGDWDLSF 10
VKG W L++
Sbjct: 450 VKGQWFLNY 458


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VKGDWDLSF 10
VKG W L++
Sbjct: 450 VKGQWFLNY 458




7|SequenceR|40|31|KKKIESVKGD

>sp|Y659_METJA|UNCHARACTERIZED protein MJ0659|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KKIESVKGD 10
KK+E +KGD
Sbjct: 19 KKVEEIKGD 27


>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain

Query: 1 KKKIESVKG 9
KKK+ES++G
Sbjct: 13 KKKLESLRG 21


>sp|DMO1_DESMO|HOMING endonuclease I-DmoI|Desulfurococcus mucosus (Desulfurococcus

Query: 1 KKKIESVKGD 10
K KI+ VKGD
Sbjct: 66 KSKIQIVKGD 75


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 KKKIESVKG 9
KKKIE V+G
Sbjct: 471 KKKIEPVEG 479


>sp|PURP_PYRCJ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum calidifontis (strain DSM

Query: 2 KKIESVKGD 10
K+I++V+GD
Sbjct: 166 KRIKAVEGD 174


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 1 KKKIESVKG 9
KKKIE V+G
Sbjct: 471 KKKIEPVEG 479


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KKIESVKGD 10
++IES+KG+
Sbjct: 226 RRIESLKGE 234




8|SequenceR|45|36|LISKIKKKIE

>sp|YSO2_ACIAM|UNCHARACTERIZED transporter in sor 3'region|Acidianus ambivalens (Desulfurolobus

Query: 1 LISKIKKKI 9
LIS+++KKI
Sbjct: 233 LISRLEKKI 241




9|SequenceR|50|41|CSRGPLISKI

>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 1 CSRGPLISK 9
CSR P+I +
Sbjct: 421 CSRAPVIRQ 429


>sp|LYSK_SACI7|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SRGPLISKI 10
++GPLIS I
Sbjct: 93 AKGPLISMI 101


>sp|LYSK_SACI4|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SRGPLISKI 10
++GPLIS I
Sbjct: 93 AKGPLISMI 101


>sp|LYSK_SACI3|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 SRGPLISKI 10
++GPLIS I
Sbjct: 93 AKGPLISMI 101


>sp|LYSK_SACI2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SRGPLISKI 10
++GPLIS I
Sbjct: 93 AKGPLISMI 101


>sp|LYSK_SACI1|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SRGPLISKI 10
++GPLIS I
Sbjct: 93 AKGPLISMI 101


>sp|LYSK_SACI6|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SRGPLISKI 10
++GPLIS I
Sbjct: 93 AKGPLISMI 101


>sp|LYSK_SACS2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SRGPLISKI 10
++GPLIS I
Sbjct: 93 AKGPLISMI 101


>sp|LYSK_SULAC|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 RGPLISKI 10
+GPLIS I
Sbjct: 93 KGPLISMI 100


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 4 GPLISKI 10
GPL+SK+
Sbjct: 414 GPLVSKM 420


>sp|MRE11_METAC|DNA double-strand break repair protein|Methanosarcina acetivorans

Query: 2 SRGPLISKI 10
S+G L+SK+
Sbjct: 302 SKGALVSKV 310


>sp|RL10_PYRAE|LARGE ribosomal subunit protein uL10|Pyrobaculum aerophilum (strain ATCC

Query: 2 SRGPLISK 9
S GP+ISK
Sbjct: 139 SPGPIISK 146




10|SequenceR|55|46|DQLLDCSRGP

>sp|SFSA_PYRFU|SUGAR fermentation stimulation protein homolog|Pyrococcus furiosus

Query: 1 DQLLDCSRG 9
D LL+CS+G
Sbjct: 117 DYLLECSKG 125


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DQLLDCSRG 9
+QLL+CS G
Sbjct: 411 EQLLNCSLG 419


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DQLLDCSRG 9
+QLL+CS G
Sbjct: 411 NQLLNCSLG 419


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QLLDCSRG 9
+ +DCSRG
Sbjct: 621 EAVDCSRG 628


>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 DQLLDCS 7
D+LLDC+
Sbjct: 67 DELLDCA 73


>sp|CCA_METBF|CCA-ADDING enzyme|Methanosarcina barkeri (strain Fusaro /

Query: 1 DQLLDCSRG 9
D+L+ CS G
Sbjct: 411 DRLMSCSLG 419


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DQLLDCSRG 9
++ +DCS+G
Sbjct: 619 NEAVDCSKG 627


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 3 LLDCSRGP 10
++DC+ GP
Sbjct: 170 VVDCANGP 177




11|SequenceR|60|51|PLHSTDQLLD

>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 PLHSTDQLLD 10
PL S DQ+L+
Sbjct: 763 PLESDDQILE 772


>sp|Y2248_HALVD|UNCHARACTERIZED motility-related protein HVO_2248|Haloferax volcanii (strain ATCC

Query: 1 PLHSTDQLLD 10
P HST++L D
Sbjct: 158 PEHSTEELDD 167




12|SequenceR|65|56|DSHEPPLHST

>sp|PGK_HALLT|PHOSPHOGLYCERATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 SHEPPLHST 10
++EPP+H +
Sbjct: 311 AYEPPIHES 319


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DSHEPPLH 8
D+ EPPLH
Sbjct: 444 DAGEPPLH 451




13|SequenceR|70|61|GVIVVDSHEP

>sp|RL15E_METMJ|LARGE ribosomal subunit protein eL15|Methanoculleus marisnigri (strain

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 132 VILVDGHHP 140


>sp|RL15E_METB6|LARGE ribosomal subunit protein eL15|Methanoregula boonei (strain DSM

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 132 VILVDGHHP 140


>sp|RL15E_STAMF|LARGE ribosomal subunit protein eL15|Staphylothermus marinus (strain ATCC

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 132 VILVDPHHP 140


>sp|RL15E_METMA|LARGE ribosomal subunit protein eL15|Methanosarcina mazei (strain ATCC

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 132 VILVDPHHP 140


>sp|RL15E_METAC|LARGE ribosomal subunit protein eL15|Methanosarcina acetivorans (strain

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 132 VILVDPHHP 140


>sp|RL15E_DESA1|LARGE ribosomal subunit protein eL15|Desulfurococcus amylolyticus (strain

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 131 VILVDPHHP 139


>sp|RL15E_THEON|LARGE ribosomal subunit protein eL15|Thermococcus onnurineus (strain NA1)

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 130 VIMVDPHHP 138


>sp|RL15E_THEKO|LARGE ribosomal subunit protein eL15|Thermococcus kodakarensis (strain

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 130 VIMVDPHHP 138


>sp|RL15E_THEGJ|LARGE ribosomal subunit protein eL15|Thermococcus gammatolerans (strain

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 130 VIMVDPHHP 138


>sp|RL15E_PYRHO|LARGE ribosomal subunit protein eL15|Pyrococcus horikoshii (strain ATCC

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 130 VIMVDPHHP 138


>sp|RL15E_PYRFU|LARGE ribosomal subunit protein eL15|Pyrococcus furiosus (strain ATCC

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 130 VIMVDPHHP 138


>sp|RL15E_PYRAB|LARGE ribosomal subunit protein eL15|Pyrococcus abyssi (strain GE5 /

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 130 VIMVDPHHP 138


>sp|RL15E_METS5|LARGE ribosomal subunit protein eL15|Metallosphaera sedula (strain ATCC

Query: 2 VIVVDSHEP 10
VI+VD H P
Sbjct: 130 VILVDPHNP 138


>sp|RL15E_METAR|LARGE ribosomal subunit protein eL15|Methanocella arvoryzae (strain DSM

Query: 2 VIVVDSHEP 10
+I+VD H P
Sbjct: 132 IILVDPHHP 140


>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 1 GVIVVDSHEP 10
GVI+ SH P
Sbjct: 91 GVILTASHNP 100


>sp|RRP41_SULTO|EXOSOME complex component Rrp41|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVIVVDSHEP 10
GV+V+D +EP
Sbjct: 168 GVLVLDLNEP 177


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 VIVVDSHEP 10
VI+VDS +P
Sbjct: 162 VIIVDSTDP 170


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 VIVVDSHEP 10
VI+VDS +P
Sbjct: 156 VIIVDSTDP 164


>sp|SPEE_PYRHO|POLYAMINE aminopropyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VIVVDSHEP 10
VI+VDS +P
Sbjct: 157 VIIVDSTDP 165


>sp|RADB_METBU|DNA repair and recombination protein|Methanococcoides burtonii (strain

Query: 1 GVIVVDS 7
GVI+VDS
Sbjct: 112 GVIIVDS 118


>sp|KADA_AERPE|ADENYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GVIVVDSH 8
GV+++D+H
Sbjct: 92 GVLIIDTH 99


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC

Query: 1 GVIVVDSHEP 10
GV+V SH P
Sbjct: 85 GVMVTASHNP 94


>sp|AMZA_PYRHO|ARCHAEMETZINCIN horikoshii (strain ATCC 700860

Query: 1 GVIVVDSHEP 10
G++ VD +EP
Sbjct: 81 GIVNVDIYEP 90


>sp|MOAE_HALVD|PROBABLE molybdopterin synthase|Haloferax volcanii (strain ATCC 29605

Query: 5 VDSHEP 10
+DSHEP
Sbjct: 122 IDSHEP 127


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GVIVVDSHEP 10
GV+V SH P
Sbjct: 85 GVMVTASHNP 94


>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVIVVDSHEP 10
GV++ SH P
Sbjct: 91 GVVITASHNP 100


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 GVIVVDSHEP 10
GV+V SH P
Sbjct: 85 GVMVTASHNP 94


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 1 GVIVVDSHE 9
GVI+VD +E
Sbjct: 143 GVILVDRNE 151


>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain DSM

Query: 1 GVIVVDSHE 9
GVI+VD +E
Sbjct: 143 GVILVDRNE 151


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 1 GVIVVDSHE 9
GVI+VD +E
Sbjct: 143 GVILVDRNE 151


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 1 GVIVVDSHE 9
GVI+VD +E
Sbjct: 143 GVILVDRNE 151


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 1 GVIVVDSHE 9
GVI+VD +E
Sbjct: 143 GVILVDRNE 151


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 1 GVIVVDSHE 9
GVI+VD +E
Sbjct: 143 GVILVDRNE 151


>sp|T2M1_METJA|TYPE II restriction enzyme MjaI|Methanocaldococcus jannaschii (strain

Query: 1 GVIVVDSHE 9
GVI++D E
Sbjct: 164 GVIIIDDKE 172


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VIVVDSHEP 10
VIV+D H P
Sbjct: 465 VIVIDHHFP 473


>sp|COFC_HALLT|2-PHOSPHO-L-LACTATE guanylyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GVIVVDSH 8
GV VVDSH
Sbjct: 159 GVRVVDSH 166


>sp|SECD_HALWD|PROTEIN-EXPORT membrane protein SecD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GVIVVDSHEP 10
G +VV +H P
Sbjct: 198 GTVVVQAHYP 207


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 1 GVIVVDSHEP 10
GV++ SH P
Sbjct: 85 GVMITASHNP 94


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 1 GVIVVDSHEP 10
GV++ SH P
Sbjct: 87 GVMITASHNP 96


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VIVVDSHEP 10
VI+VDS +P
Sbjct: 146 VIIVDSTDP 154


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 1 GVIVVDSHEP 10
GV++ SH P
Sbjct: 95 GVMITASHNP 104


>sp|RS12_AERPE|SMALL ribosomal subunit protein uS12|Aeropyrum pernix (strain ATCC 700893

Query: 1 GVIVVDSHE 9
G++ VD H+
Sbjct: 93 GILYVDEHD 101




14|SequenceR|75|66|GLVGGGVIVV

>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 1 GLVGGGVI 8
GL+GGG+I
Sbjct: 608 GLLGGGMI 615


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 1 GLVGGGV 7
GLVGGG+
Sbjct: 608 GLVGGGM 614


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 2 LVGGGVIV 9
L GGGVI+
Sbjct: 209 LAGGGVII 216


>sp|Y780_METJA|UNCHARACTERIZED protein MJ0780|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLVGGGVIVV 10
GL+G G+I+V
Sbjct: 135 GLIGAGIILV 144


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 4 GGGVIVV 10
GGGV+V+
Sbjct: 155 GGGVLVI 161


>sp|Y2183_ARCFU|UNCHARACTERIZED protein AF_2183|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLVGGGVIV 9
GLV GGV+V
Sbjct: 98 GLVYGGVLV 106


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius (strain

Query: 1 GLVGGGV 7
GL+GGG+
Sbjct: 95 GLLGGGI 101


>sp|RADA_SULTO|DNA repair and recombination protein|Sulfurisphaera tokodaii (strain

Query: 1 GLVGGGV 7
GL+GGG+
Sbjct: 98 GLLGGGI 104


>sp|RADA_METS5|DNA repair and recombination protein|Metallosphaera sedula (strain ATCC

Query: 1 GLVGGGV 7
GL+GGG+
Sbjct: 98 GLLGGGI 104


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLVGGGVIVV 10
GL+GG IV+
Sbjct: 92 GLIGGIFIVI 101


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 1 GLVGGGVIV 9
G++GG ++V
Sbjct: 66 GMIGGNIVV 74




15|SequenceR|80|71|YAVSLGLVGG

>sp|GVPH2_HALSA|GAS vesicle protein H2|Halobacterium salinarum (strain ATCC 700922

Query: 1 YAVSLGL 7
YAVS+GL
Sbjct: 51 YAVSIGL 57


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 2 AVSLGLVG 9
A+SLG+VG
Sbjct: 799 ALSLGVVG 806


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YAVSLGLV 8
YA+S+G+V
Sbjct: 256 YAISVGMV 263


>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 YAVSLGLVG 9
Y ++LGL+G
Sbjct: 90 YRIALGLLG 98


>sp|Y1317_METJA|UNCHARACTERIZED MFS-type transporter MJ1317|Methanocaldococcus jannaschii (strain

Query: 2 AVSLGLVGG 10
++S+GLVGG
Sbjct: 56 SLSIGLVGG 64


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YAVSLGLV 8
YA+S+G+V
Sbjct: 255 YAISVGMV 262


>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YAVSLGLV 8
+AVS+GLV
Sbjct: 245 FAVSMGLV 252




16|SequenceR|85|76|LKKLWYAVSL

>sp|ILVC_METBU|KETOL-ACID reductoisomerase (NADP(+))|Methanococcoides burtonii (strain DSM

Query: 1 LKKLWYAVS 9
L+K+WY+VS
Sbjct: 244 LEKMWYSVS 252


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LKKLWYAVSL 10
LK +WYA+ +
Sbjct: 235 LKAIWYALEI 244


>sp|RL3_NANEQ|LARGE ribosomal subunit protein uL3|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 KKLWYAVSL 10
KKL YA+SL
Sbjct: 164 KKLEYALSL 172


>sp|Y1661_ARCFU|UNCHARACTERIZED protein AF_1661|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKKLWYAV 8
+KK+WY++
Sbjct: 1 MKKVWYSL 8




17|SequenceR|90|81|GRRSELKKLW

>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 1 GRRSELKKLW 10
R SELK LW
Sbjct: 724 ARISELKNLW 733


>sp|KDGA_SACS2|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GRRSELKKLW 10
GR+ L++LW
Sbjct: 2 GRQGNLEELW 11


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRRSELKKL 9
GRR +LK L
Sbjct: 246 GRRGDLKSL 254


>sp|Y1295_METJA|UNCHARACTERIZED protein MJ1295|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RSELKKLW 10
+ ELKK W
Sbjct: 55 KEELKKYW 62


>sp|RL34_THEKO|LARGE ribosomal subunit protein eL34|Thermococcus kodakarensis (strain

Query: 1 GRRSELKKL 9
GR SEL+KL
Sbjct: 49 GRPSELRKL 57


>sp|RL34_THEGJ|LARGE ribosomal subunit protein eL34|Thermococcus gammatolerans (strain

Query: 1 GRRSELKKL 9
GR SEL+KL
Sbjct: 49 GRPSELRKL 57


>sp|RL34_THEON|LARGE ribosomal subunit protein eL34|Thermococcus onnurineus (strain

Query: 1 GRRSELKKL 9
GR SEL+KL
Sbjct: 49 GRPSELRKL 57


>sp|Y103_METJA|UNCHARACTERIZED protein MJ0103|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRRSELKKLW 10
GRR + K+W
Sbjct: 318 GRRPKKMKVW 327


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GRRSELKKLW 10
GR E K+ W
Sbjct: 272 GREEEWKRFW 281


>sp|FEN_ARCFU|FLAP endonuclease 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RRSELKKLW 10
RR+E +++W
Sbjct: 97 RRAEAEEMW 105


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GRRSELKKLW 10
GR E K+ W
Sbjct: 272 GREEEWKRFW 281


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RRSELKKL 9
R+SELKK+
Sbjct: 394 RKSELKKI 401


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 1 GRRSELKKL 9
GRR +L+KL
Sbjct: 258 GRRDDLRKL 266




18|SequenceR|95|86|LVRIAGRRSE

>sp|GPDA_METTH|GLYCEROL-3-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 1 LVRIAGRRSE 10
+VR+ RRSE
Sbjct: 25 MVRLMARRSE 34


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VRIAGRRSE 10
+RIAGR S+
Sbjct: 348 MRIAGRESK 356


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 1 LVRIAGR 7
LVR+AGR
Sbjct: 24 LVRVAGR 30


>sp|RSMA_HALMA|PROBABLE ribosomal RNA small subunit|Haloarcula marismortui (strain ATCC

Query: 1 LVRIAGRRSE 10
LVR AG+R++
Sbjct: 14 LVRRAGKRAD 23




19|SequenceR|100|91|DREVVLVRIA

>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DREVVLV 7
DREVVL+
Sbjct: 394 DREVVLI 400


>sp|IF6_AERPE|TRANSLATION initiation factor 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 DREVVLVRIA 10
DREV LVR A
Sbjct: 85 DREVELVRKA 94


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 1 DREVVLVR 8
DRE VLVR
Sbjct: 394 DREEVLVR 401




20|SequenceR|105|96|QSYTHDREVV

>sp|RL2_HALWD|LARGE ribosomal subunit protein uL2|Haloquadratum walsbyi (strain DSM

Query: 1 QSYTHDREVV 10
Q THDR+VV
Sbjct: 128 QLMTHDRDVV 137


>sp|KAE1_PYRNV|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum neutrophilum

Query: 2 SYTHDREVV 10
+YT REVV
Sbjct: 242 AYTRKREVV 250


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SYTHDREVV 10
S +HD+E++
Sbjct: 408 SASHDKEII 416


>sp|RL2_HALMA|LARGE ribosomal subunit protein uL2|Haloarcula marismortui (strain ATCC

Query: 1 QSYTHDREV 9
Q THDR V
Sbjct: 128 QLLTHDRNV 136


>sp|RL2_HALLT|LARGE ribosomal subunit protein uL2|Halorubrum lacusprofundi (strain ATCC

Query: 4 THDREV 9
THDR+V
Sbjct: 131 THDRDV 136


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 3 YTHDRE 8
Y HDRE
Sbjct: 276 YDHDRE 281


>sp|EI2BL_PYRFU|PUTATIVE translation initiation factor eIF-2B|Pyrococcus furiosus (strain

Query: 4 THDREVV 10
T+DREVV
Sbjct: 75 TNDREVV 81


>sp|LPLAN_THEAC|LIPOATE-PROTEIN ligase A subunit 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 YTHDREVV 10
Y HDR V+
Sbjct: 39 YRHDRSVI 46


>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QSYTHDREVV 10
QSY HD VV
Sbjct: 201 QSYLHDGLVV 210




21|SequenceR|110|101|LGTSAQSYTH

>sp|RL2_HALWD|LARGE ribosomal subunit protein uL2|Haloquadratum walsbyi (strain DSM

Query: 2 GTSAQSYTH 10
GTSAQ TH
Sbjct: 124 GTSAQLMTH 132




22|SequenceR|115|106|IGGVSLGTSA

>sp|HEM1_METVS|GLUTAMYL-TRNA reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GGVSLGTSA 10
GGVS+G++A
Sbjct: 136 GGVSIGSAA 144


>sp|HEM1_METM7|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C7 /

Query: 2 GGVSLGTSA 10
GGVS+G++A
Sbjct: 137 GGVSIGSAA 145


>sp|HEM1_METM6|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C6 /

Query: 2 GGVSLGTSA 10
GGVS+G++A
Sbjct: 137 GGVSIGSAA 145


>sp|HEM1_METM5|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C5 /

Query: 2 GGVSLGTSA 10
GGVS+G++A
Sbjct: 137 GGVSIGSAA 145


>sp|HEM1_METJA|GLUTAMYL-TRNA reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGVSLGTSA 10
GGVS+G++A
Sbjct: 138 GGVSIGSAA 146


>sp|HEM1_METST|GLUTAMYL-TRNA reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GGVSLGTSA 10
GGVS+G+ A
Sbjct: 139 GGVSVGSGA 147


>sp|RS8_SULTO|SMALL ribosomal subunit protein uS8|Sulfurisphaera tokodaii (strain DSM

Query: 1 IGGVSLG 7
IGGV+LG
Sbjct: 124 IGGVALG 130


>sp|PYRB_NITMS|ASPARTATE carbamoyltransferase catalytic subunit|Nitrosopumilus maritimus

Query: 1 IGGVSLGTS 9
IGG SLG S
Sbjct: 69 IGGNSLGIS 77


>sp|RS8_SACS2|SMALL ribosomal subunit protein uS8|Saccharolobus solfataricus (strain

Query: 1 IGGVSLG 7
IGGV+LG
Sbjct: 124 IGGVALG 130


>sp|CBP1_PYRFU|THERMOSTABLE carboxypeptidase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GGVSLG 7
GGVSLG
Sbjct: 291 GGVSLG 296


>sp|CDPAS_THEON|CDP-ARCHAEOL synthase|Thermococcus onnurineus (strain NA1)

Query: 1 IGGVSLGTS 9
IGGV++GT+
Sbjct: 55 IGGVAIGTA 63


>sp|RS8_SULAC|SMALL ribosomal subunit protein uS8|Sulfolobus acidocaldarius (strain

Query: 1 IGGVSLG 7
IGGV+LG
Sbjct: 124 IGGVTLG 130


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 GGVSLGTSA 10
GGV+ GT A
Sbjct: 282 GGVAFGTFA 290




23|SequenceR|120|111|SFQQCIGGVS

>sp|Y1485_METJA|UNCHARACTERIZED cation transporter MJ1485|Methanocaldococcus jannaschii (strain

Query: 1 SFQQCIGGV 9
SFQQ IGGV
Sbjct: 137 SFQQWIGGV 145


>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 FQQCIGGVS 10
F C+GGV+
Sbjct: 252 FMACMGGVT 260


>sp|GGR2_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 QCIGGVS 10
QC GGVS
Sbjct: 42 QCAGGVS 48


>sp|HISX_METBF|HISTIDINOL dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FQQCIGGVS 10
FQQ + G+S
Sbjct: 71 FQQALSGIS 79


>sp|AATE_THEGJ|A-TYPE ATP synthase subunit E|Thermococcus gammatolerans (strain DSM 15229

Query: 4 QCIGGV 9
+CIGGV
Sbjct: 156 ECIGGV 161


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 5 CIGGVS 10
CIGGV+
Sbjct: 73 CIGGVA 78




24|SequenceR|125|116|INEPLSFQQC

>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 NEPLSFQQ 9
NEPL+F++
Sbjct: 111 NEPLTFEE 118


>sp|FPOJ_METMA|F(420)H(2) dehydrogenase subunit J|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 INEPLSFQQC 10
IN PL+F C
Sbjct: 96 INRPLAFLVC 105


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 1 INEPLSF 7
INEPL F
Sbjct: 56 INEPLDF 62


>sp|K6PF_THELI|ADP-SPECIFIC phosphofructokinase|Thermococcus litoralis

Query: 1 INEPLSF 7
INEPL F
Sbjct: 55 INEPLDF 61


>sp|K6PF_THEKO|ADP-SPECIFIC phosphofructokinase|Thermococcus kodakarensis (strain ATCC

Query: 1 INEPLSF 7
INEPL F
Sbjct: 56 INEPLDF 62


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 INEPLSF 7
INEPL F
Sbjct: 52 INEPLDF 58


>sp|ENDA_METJA|TRNA-SPLICING endonuclease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NEPLSFQQ 9
N+PLSF++
Sbjct: 66 NKPLSFEE 73


>sp|DNLI_METST|DNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NEPLSFQ 8
N+P+SFQ
Sbjct: 310 NKPISFQ 316




25|SequenceR|130|121|FLSLQINEPL

>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 LSLQINEPL 10
LSL IN+P+
Sbjct: 100 LSLSINKPI 108


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 LSLQINEPL 10
LSL IN+P+
Sbjct: 99 LSLSINKPI 107


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 LSLQINEPL 10
LSL IN+P+
Sbjct: 99 LSLSINKPI 107


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 LSLQINEPL 10
LSL IN+P+
Sbjct: 99 LSLSINKPI 107


>sp|PYRE_PYRHO|OROTATE phosphoribosyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 2 LSLQINEPL 10
LSL+ N+PL
Sbjct: 81 LSLETNKPL 89


>sp|RS4_METPE|SMALL ribosomal subunit protein uS4|Methanosphaerula palustris (strain

Query: 2 LSLQINEPL 10
LSL+I +PL
Sbjct: 98 LSLKIQQPL 106


>sp|PYRE_PYRAY|OROTATE phosphoribosyltransferase|Pyrococcus abyssi

Query: 2 LSLQINEPL 10
LSL+ N+PL
Sbjct: 79 LSLETNKPL 87


>sp|COFC_METST|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 FLSLQINEP 9
+LSL +N P
Sbjct: 178 YLSLDVNTP 186




26|SequenceR|135|126|LFSASFLSLQ

>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LFSASFLSLQ 10
LFSA+FL +
Sbjct: 310 LFSAAFLGYE 319




27|SequenceR|140|131|ENINRLFSAS

>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ENINRLFSA 9
E+INR+FS+
Sbjct: 236 EDINRIFSS 244


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 ENINRLFS 8
E+INR+FS
Sbjct: 77 EDINRIFS 84


>sp|Y286_METJA|UNCHARACTERIZED protein MJ0286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENINRLFS 8
E INRLFS
Sbjct: 68 EGINRLFS 75


>sp|THII_ARCFU|PROBABLE tRNA sulfurtransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ENINRLFSAS 10
+NIN ++SAS
Sbjct: 287 DNINVIYSAS 296


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ENINRLFS 8
E INRLF+
Sbjct: 351 EEINRLFA 358


>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ENINRLFSAS 10
EN+ RLFS +
Sbjct: 189 ENVLRLFSTT 198


>sp|PCNA_METHJ|DNA polymerase sliding clamp|Methanospirillum hungatei JF-1 (strain

Query: 1 ENINRLFSA 9
+NI R FSA
Sbjct: 172 DNIRRAFSA 180




28|SequenceR|145|136|VVALYENINR

>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 1 VVALYENIN 9
V ALYEN+N
Sbjct: 140 VDALYENVN 148


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 LYENIN 9
LYENIN
Sbjct: 5 LYENIN 10


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VVALYENIN 9
+VA+ ENIN
Sbjct: 541 IVAIDENIN 549


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VVALYENIN 9
+VA+ ENIN
Sbjct: 541 IVAIDENIN 549


>sp|NAT_SACS2|N-ALPHA-ACETYLTRANSFERASE solfataricus (strain ATCC 35092

Query: 2 VALYENIN 9
+ALYE +N
Sbjct: 136 IALYEKLN 143




29|SequenceR|150|141|LPPADVVALY

>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 1 LPPADVV 7
LPP DVV
Sbjct: 303 LPPTDVV 309


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 1 LPPADVVAL 9
PPAD+ AL
Sbjct: 243 FPPADLGAL 251


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LPPADVVALY 10
L P D+VALY
Sbjct: 430 LSPDDLVALY 439


>sp|FTR_METMA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PADVVALY 10
PADV A+Y
Sbjct: 238 PADVNAVY 245


>sp|FTR_METAC|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PADVVALY 10
PADV A+Y
Sbjct: 238 PADVNAIY 245


>sp|FTR_METBF|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PADVVALY 10
PADV A+Y
Sbjct: 238 PADVNAVY 245




30|SequenceR|155|146|NFRLDLPPAD

>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NFRLDLPP 8
NFRL+ PP
Sbjct: 36 NFRLEFPP 43


>sp|SELB_METJA|SELENOCYSTEINE-SPECIFIC elongation factor|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RLDLPP 8
RLDLPP
Sbjct: 364 RLDLPP 369


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 3 RLDLPPAD 10
RLD PP D
Sbjct: 352 RLDYPPED 359


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FRLDLPP 8
FRL++PP
Sbjct: 256 FRLNMPP 262


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FRLDLPPAD 10
F L++PP D
Sbjct: 256 FELEMPPID 264


>sp|T1S1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 1 NFRLDLPPAD 10
NF++ LPP +
Sbjct: 370 NFKIPLPPLE 379


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NFRLDLPPA 9
+ RLD PPA
Sbjct: 24 DIRLDEPPA 32


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 NFRLDLPPA 9
+ RLD PPA
Sbjct: 24 DIRLDEPPA 32


>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 NFRLDLPPA 9
+ RLD PPA
Sbjct: 24 DIRLDEPPA 32


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RLDLPP 8
RLDLPP
Sbjct: 54 RLDLPP 59


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 2 FRLDLPPA 9
F+L +PPA
Sbjct: 387 FKLTVPPA 394


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LDLPPAD 10
LDL PAD
Sbjct: 237 LDLAPAD 243


>sp|AROD_HALWD|3-DEHYDROQUINATE dehydratase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 FRLDLPPAD 10
FRLDL AD
Sbjct: 36 FRLDLAYAD 44


>sp|PRIS_THEVO|DNA primase small subunit PriS|Thermoplasma volcanium (strain ATCC

Query: 1 NFRLDLPPA 9
++++DLPP
Sbjct: 304 DYKIDLPPG 312


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 2 FRLDLPP 8
+ LDLPP
Sbjct: 129 YNLDLPP 135


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RLDLPP 8
RLD+PP
Sbjct: 54 RLDMPP 59


>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 RLDLPP 8
RLDLPP
Sbjct: 54 RLDLPP 59


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM

Query: 3 RLDLPPA 9
R+D PPA
Sbjct: 21 RMDTPPA 27


>sp|ECFA_METMJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanoculleus marisnigri

Query: 3 RLDLPP 8
RLD+PP
Sbjct: 236 RLDVPP 241


>sp|RL30_STAMF|LARGE ribosomal subunit protein uL30|Staphylothermus marinus (strain

Query: 3 RLDLPP 8
RLD+PP
Sbjct: 13 RLDVPP 18




31|SequenceR|160|151|LYGSPNFRLD

>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LYGSPNFRL 9
+YG P FRL
Sbjct: 194 IYGIPEFRL 202


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 2 YGSPNFRLD 10
Y SP FRLD
Sbjct: 317 YVSPYFRLD 325


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GSPNFRLD 10
GSP FR D
Sbjct: 423 GSPTFRKD 430


>sp|RS15_METMP|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain

Query: 1 LYGSPNFRL 9
+YG PN +L
Sbjct: 57 MYGVPNVKL 65


>sp|RS15_METM5|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain

Query: 1 LYGSPNFRL 9
+YG PN +L
Sbjct: 57 MYGVPNVKL 65


>sp|EF2_KORCO|ELONGATION factor 2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 YGSPNFR 8
YG P FR
Sbjct: 182 YGEPEFR 188


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 PNFRLD 10
PNF+LD
Sbjct: 1149 PNFKLD 1154


>sp|IF6_THEPD|TRANSLATION initiation factor 6|Thermofilum pendens (strain DSM 2475

Query: 1 LYGSPN 6
LYG+PN
Sbjct: 9 LYGTPN 14


>sp|YLG3_ACIAM|UNCHARACTERIZED protein in lig 3'region|Acidianus ambivalens (Desulfurolobus

Query: 2 YGSPNFR 8
YG P FR
Sbjct: 67 YGKPTFR 73


>sp|LADH_META3|LACTALDEHYDE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 SPNFRLD 10
SP FR+D
Sbjct: 424 SPTFRID 430


>sp|RS15_METVS|SMALL ribosomal subunit protein uS15|Methanococcus vannielii (strain

Query: 1 LYGSPNFRL 9
+YG PN +L
Sbjct: 57 MYGIPNVKL 65


>sp|IF6_AERPE|TRANSLATION initiation factor 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 LYGSPN 6
LYG+PN
Sbjct: 14 LYGNPN 19


>sp|RS15_METTP|SMALL ribosomal subunit protein uS15|Methanothrix thermoacetophila

Query: 2 YGSPNFRL 9
YG PN +L
Sbjct: 58 YGVPNLKL 65


>sp|IF2A_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 3 GSPNFRLD 10
G+P +R+D
Sbjct: 220 GAPRYRID 227


>sp|IF2A_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 GSPNFRLD 10
G+P +R+D
Sbjct: 220 GAPRYRID 227


>sp|IF2A_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain DSM

Query: 3 GSPNFRLD 10
G+P +R+D
Sbjct: 220 GAPRYRID 227


>sp|IF2A_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 3 GSPNFRLD 10
G+P +R+D
Sbjct: 220 GAPRYRID 227


>sp|IF2A_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 GSPNFRLD 10
G+P +R+D
Sbjct: 220 GAPRYRID 227


>sp|IF2A_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GSPNFRLD 10
G+P +R+D
Sbjct: 220 GAPRYRID 227


>sp|IF2A_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 GSPNFRLD 10
G+P +R+D
Sbjct: 220 GAPRYRID 227


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LYGSPNFR 8
+YG P F+
Sbjct: 180 MYGEPEFK 187


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LYGSPNFR 8
+YG P F+
Sbjct: 180 MYGEPEFK 187


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LYGSPNFR 8
+YG P F+
Sbjct: 180 MYGEPEFK 187


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LYGSPNFR 8
+YG P F+
Sbjct: 180 MYGEPEFK 187


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LYGSPNFR 8
+YG P F+
Sbjct: 180 MYGEPEFK 187


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LYGSPNFR 8
+YG P F+
Sbjct: 180 MYGEPEFK 187


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LYGSPNFR 8
+YG P F+
Sbjct: 180 MYGEPEFK 187


>sp|DPCKG_METS3|GTP-DEPENDENT dephospho-CoA kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LYGSPN 6
LYG PN
Sbjct: 139 LYGQPN 144


>sp|TRMY_METJA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocaldococcus

Query: 1 LYGSPN 6
LYG PN
Sbjct: 56 LYGQPN 61


>sp|TTRC_ARCFU|TETRATHIONATE reductase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LYGSPNF 7
++G+PNF
Sbjct: 252 MWGNPNF 258


>sp|GALE_METJA|PUTATIVE UDP-glucose 4-epimerase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LYGSPNF 7
+YG PN+
Sbjct: 119 VYGEPNY 125


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 1 LYGSPNF 7
+YGSP++
Sbjct: 333 IYGSPSY 339




32|SequenceR|165|156|ESALLLYGSP

>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 ALLLYGSP 10
ALLLYG P
Sbjct: 70 ALLLYGPP 77


>sp|RFCL_HALMA|REPLICATION factor C large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 ALLLYGSP 10
A++LYGSP
Sbjct: 38 AVILYGSP 45


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 2 SALLLYGSP 10
S +LLYG P
Sbjct: 187 SGVLLYGPP 195


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 2 SALLLYGSP 10
S +LLYG P
Sbjct: 185 SGVLLYGPP 193


>sp|DPCKG_ARCFU|GTP-DEPENDENT dephospho-CoA kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ALLLYGSP 10
AL+LYG P
Sbjct: 139 ALILYGQP 146


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 ALLLYGSP 10
A+LLYG P
Sbjct: 43 AVLLYGPP 50


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 ESALLLYGSP 10
+ +L+LYG P
Sbjct: 39 KKSLILYGDP 48


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 2 SALLLYGSP 10
S LL+YG P
Sbjct: 68 SNLLVYGKP 76


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 3 ALLLYGSP 10
A+LLYG P
Sbjct: 43 AVLLYGPP 50


>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 4 LLLYGSP 10
LLLYG P
Sbjct: 39 LLLYGKP 45


>sp|DPCKG_THEON|GTP-DEPENDENT dephospho-CoA kinase|Thermococcus onnurineus (strain NA1)

Query: 1 ESALLLYGSP 10
E +++LYG P
Sbjct: 137 EGSVVLYGQP 146


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 ESALLLYGSP 10
+ A++LYG P
Sbjct: 43 KKAVILYGGP 52


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 ALLLYGSP 10
A LLYG P
Sbjct: 51 AALLYGPP 58


>sp|DPCKG_METBF|GTP-DEPENDENT dephospho-CoA kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 ALLLYGSP 10
A++LYG P
Sbjct: 142 AVVLYGQP 149


>sp|DPCKG_CENSY|GTP-DEPENDENT dephospho-CoA kinase|Cenarchaeum symbiosum (strain A)

Query: 1 ESALLLYGSP 10
+ A+++YG P
Sbjct: 117 DGAVIMYGQP 126


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC

Query: 4 LLLYGSP 10
L+LYG P
Sbjct: 39 LILYGKP 45


>sp|DPCKG_METLZ|GTP-DEPENDENT dephospho-CoA kinase|Methanocorpusculum labreanum (strain ATCC

Query: 1 ESALLLYGSP 10
+ A++LYG P
Sbjct: 125 DGAVILYGQP 134


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain

Query: 4 LLLYGSP 10
L+LYG P
Sbjct: 39 LILYGKP 45


>sp|TRMY_THEGJ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 4 LLLYGSP 10
LLLYG P
Sbjct: 54 LLLYGPP 60


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 ESALLLYGSP 10
+ A LLYG P
Sbjct: 47 KKAALLYGPP 56




33|SequenceR|170|161|AAADKESALL

>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AAADKESALL 10
AA D+E ALL
Sbjct: 650 AAGDEEVALL 659




34|SequenceR|175|166|VNSEMAAADK

>sp|ILVC3_SACS2|PUTATIVE ketol-acid reductoisomerase 3|Saccharolobus solfataricus (strain

Query: 1 VNSEMAAADK 10
V SEMA A+K
Sbjct: 311 VQSEMAKAEK 320




35|SequenceR|180|171|QRQVKVNSEM

***** No hits found ******


36|SequenceR|185|176|VKAGEQRQVK

>sp|FEN_THEKO|FLAP endonuclease 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VKAGEQRQVK 10
VKAG+QR ++
Sbjct: 326 VKAGKQRTLE 335


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VKAGEQRQVK 10
VKAG+QR ++
Sbjct: 326 VKAGKQRTLE 335




37|SequenceR|190|181|PSMLSVKAGE

>sp|RL10_NATPD|LARGE ribosomal subunit protein uL10|Natronomonas pharaonis (strain ATCC

Query: 1 PSMLSVKAGE 10
PSML+ AGE
Sbjct: 241 PSMLAKAAGE 250


>sp|PYRE_METKA|OROTATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 SMLSVKAG 9
S+LSVKAG
Sbjct: 76 SVLSVKAG 83




38|SequenceR|195|186|NRLQDPSMLS

>sp|THSB_THEAC|THERMOSOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RLQDPSML 9
R++DPSM+
Sbjct: 256 RIEDPSMI 263


>sp|NTPTH_STAMF|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Staphylothermus marinus (strain ATCC 43588

Query: 2 RLQDPSML 9
RL+DPS+L
Sbjct: 138 RLRDPSIL 145


>sp|Y142_AERPE|UNCHARACTERIZED HTH-type transcriptional regulator APE_0142|Aeropyrum pernix

Query: 1 NRLQDPS 7
NRLQ PS
Sbjct: 174 NRLQPPS 180




39|SequenceR|200|191|IWPFKNRLQD

>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IWPFKNRLQ 9
IW KN+LQ
Sbjct: 18 IWDEKNKLQ 26


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 IWPFKNRLQD 10
I P+++RL+D
Sbjct: 54 ILPYEHRLKD 63


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IWPFKN 6
+WP KN
Sbjct: 358 LWPIKN 363


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IWPFKN 6
+WP KN
Sbjct: 358 LWPIKN 363


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IWPFKN 6
+WP KN
Sbjct: 358 LWPIKN 363


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IWPFKN 6
+WP KN
Sbjct: 358 LWPIKN 363


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 1 IWPFKN 6
+WP KN
Sbjct: 358 LWPIKN 363


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IWPFKN 6
+WP KN
Sbjct: 358 LWPIKN 363


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IWPFKN 6
+WP KN
Sbjct: 358 LWPIKN 363


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IWPFKNRL 8
I PFKN++
Sbjct: 345 IQPFKNKI 352


>sp|PUR8_METTH|ADENYLOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IWPFKNRLQ 9
IW +N+LQ
Sbjct: 18 IWEAENKLQ 26


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 IWPFKNRLQD 10
IW F RL++
Sbjct: 283 IWIFSRRLEN 292


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 IWPFKNRLQD 10
++P +N+L+D
Sbjct: 241 LYPIENQLKD 250


>sp|TMPS_METJA|THYMIDYLATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WPFKNRLQD 10
W FKN +++
Sbjct: 57 WTFKNNVKN 65


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IWPFKNRLQD 10
++P NR++D
Sbjct: 249 VYPIPNRVRD 258


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WPFKNR 7
WP +NR
Sbjct: 710 WPMENR 715




40|SequenceR|205|196|VGETNIWPFK

>sp|T1SX_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 VGETNIWPFK 10
VG+ NI PFK
Sbjct: 309 VGDVNIAPFK 318


>sp|RL19E_AERPE|LARGE ribosomal subunit protein eL19|Aeropyrum pernix (strain ATCC

Query: 1 VGETNIW 7
VGE+ IW
Sbjct: 16 VGESRIW 22


>sp|Y522_METJA|UNCHARACTERIZED protein MJ0522|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GETNIWPF 9
GET I PF
Sbjct: 174 GETGIAPF 181


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 2 GETNIWPFK 10
GET+ W F+
Sbjct: 271 GETHEWMFR 279


>sp|ARGDC_PYRCJ|ARGININE decarboxylase proenzyme|Pyrobaculum calidifontis (strain DSM

Query: 3 ETNIWPFK 10
E N W FK
Sbjct: 51 EVNSWKFK 58


>sp|ARGDC_PYRNV|ARGININE decarboxylase proenzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 ETNIWPFK 10
E N W FK
Sbjct: 51 EVNSWKFK 58


>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GETNIWPF 9
G T +W F
Sbjct: 356 GSTRVWKF 363


>sp|SPSS1_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GETNIWPF 9
G T +W F
Sbjct: 356 GSTRVWKF 363




41|SequenceR|210|201|YSALAVGETN

>sp|MOBA_PYRHO|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus horikoshii

Query: 1 YSALAVGE 8
YSAL++GE
Sbjct: 80 YSALSLGE 87


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 1 YSALAVGET 9
Y+ALA GE+
Sbjct: 299 YAALACGES 307


>sp|LYSX_SULAC|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YSALAVGE 8
YSA+ VGE
Sbjct: 28 YSAIGVGE 35


>sp|GVPF2_HALSA|GAS vesicle protein F2|Halobacterium salinarum (strain ATCC 700922

Query: 2 SALAVGET 9
SAL+VGET
Sbjct: 143 SALSVGET 150


>sp|DGGGP_THEKO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YSALAVGE 8
Y A+AVGE
Sbjct: 145 YGAIAVGE 152




42|SequenceR|215|206|EDEMGYSALA

>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDEMGYS 7
EDE+GY+
Sbjct: 151 EDEIGYT 157


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain

Query: 2 DEMGYSAL 9
DE GY+AL
Sbjct: 43 DEFGYAAL 50


>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 1 EDEMGYSAL 9
+DE GY+A+
Sbjct: 58 DDEFGYNAI 66


>sp|NFI_PICTO|BIFUNCTIONAL methyltransferase/endonuclease|Picrophilus torridus (strain ATCC

Query: 1 EDEMGYSAL 9
+DE+GYS +
Sbjct: 141 KDEIGYSVM 149


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DEMGYSA 8
DE+GYS+
Sbjct: 69 DEIGYSS 75




43|SequenceR|220|211|PDFWGEDEMG

>sp|RS3A_THEKO|SMALL ribosomal subunit protein eS1|Thermococcus kodakarensis (strain

Query: 1 PDFWGEDEMG 10
PDF+G E+G
Sbjct: 28 PDFFGSKEIG 37


>sp|RS3A_THEGJ|SMALL ribosomal subunit protein eS1|Thermococcus gammatolerans (strain

Query: 1 PDFWGEDEMG 10
PDF+G E+G
Sbjct: 28 PDFFGSKEIG 37


>sp|RS3A_THEON|SMALL ribosomal subunit protein eS1|Thermococcus onnurineus (strain

Query: 1 PDFWGEDEMG 10
PDF+G E+G
Sbjct: 28 PDFFGNKEIG 37


>sp|PIMT_KORCO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PDFWGED 7
P FWG+D
Sbjct: 184 PGFWGQD 190


>sp|TATCO_HALVD|SEC-INDEPENDENT protein translocase protein TatCo|Haloferax volcanii (strain ATCC

Query: 1 PDFWGEDEMG 10
P GEDEMG
Sbjct: 145 PALTGEDEMG 154


>sp|RS17E_KORCO|SMALL ribosomal subunit protein eS17|Korarchaeum cryptofilum (strain

Query: 1 PDFWGED 7
PD W ED
Sbjct: 21 PDLWTED 27


>sp|SYP_PYRIL|PROLINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PDFWGEDEM 9
P F+GE+EM
Sbjct: 299 PIFYGEEEM 307


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PDFWGEDEMG 10
P WGE E+G
Sbjct: 134 PLIWGELEVG 143


>sp|RS3A_PYRHO|SMALL ribosomal subunit protein eS1|Pyrococcus horikoshii (strain ATCC

Query: 1 PDFWGEDEMG 10
PDF+G E+G
Sbjct: 26 PDFFGGVEVG 35


>sp|RS3A_PYRFU|SMALL ribosomal subunit protein eS1|Pyrococcus furiosus (strain ATCC

Query: 1 PDFWGEDEMG 10
PDF+G E+G
Sbjct: 24 PDFFGGVEVG 33


>sp|RS3A_PYRAB|SMALL ribosomal subunit protein eS1|Pyrococcus abyssi (strain GE5 /

Query: 1 PDFWGEDEMG 10
PDF+G E+G
Sbjct: 25 PDFFGGVEVG 34


>sp|RS3A_METTH|SMALL ribosomal subunit protein eS1|Methanothermobacter

Query: 1 PDFWGEDEMG 10
P +GE+E+G
Sbjct: 24 PKLFGENEIG 33


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PDFWGEDEMG 10
PDF G E+G
Sbjct: 51 PDFLGYPELG 60


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 PDFWGEDEMG 10
PDF G E+G
Sbjct: 51 PDFLGYPELG 60


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PDFWGEDEMG 10
PDF G E+G
Sbjct: 51 PDFLGYPELG 60


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PDFWGEDEMG 10
P F+GE+E G
Sbjct: 299 PIFYGEEEKG 308


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PDFWGEDEMG 10
PDF G E+G
Sbjct: 51 PDFLGYPELG 60


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PDFWGEDEMG 10
PDF G E+G
Sbjct: 51 PDFLGYPELG 60


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PDFWGEDEMG 10
PDF G E+G
Sbjct: 51 PDFLGYPELG 60


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PDFWGEDEMG 10
PDF G E+G
Sbjct: 51 PDFLGYPELG 60


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PDFWGEDEMG 10
PDF G E+G
Sbjct: 51 PDFLGYPELG 60


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PDFWGEDEMG 10
PDF G E+G
Sbjct: 51 PDFLGYPELG 60


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 PDFWGEDEMG 10
PDF G E+G
Sbjct: 51 PDFLGMPELG 60


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DFWGEDE 8
DF+G DE
Sbjct: 80 DFYGHDE 86


>sp|HEM1_METBF|GLUTAMYL-TRNA reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DFWGEDE 8
DF+G DE
Sbjct: 79 DFYGHDE 85


>sp|HEM1_METAC|GLUTAMYL-TRNA reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DFWGEDE 8
DF+G DE
Sbjct: 80 DFYGHDE 86


>sp|RS3A_THESM|SMALL ribosomal subunit protein eS1|Thermococcus sibiricus (strain DSM

Query: 1 PDFWGEDEMG 10
P+F+G E+G
Sbjct: 28 PEFFGNVEIG 37


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PDFWGEDEMG 10
PD++G E+G
Sbjct: 54 PDWYGYPEIG 63


>sp|Y783_METJA|UNCHARACTERIZED protein MJ0783|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FWGEDE 8
+WG DE
Sbjct: 97 YWGRDE 102


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 WGEDEMG 10
W E+E+G
Sbjct: 56 WSEEELG 62


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 4 WGEDEMG 10
W E+E+G
Sbjct: 56 WSEEELG 62


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PDFWGEDEMG 10
PDF G E+G
Sbjct: 51 PDFTGMPEIG 60


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PDFWGEDEMG 10
PDF+ + E+G
Sbjct: 51 PDFFEKPEIG 60


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 PDFWGED 7
P+ WG D
Sbjct: 357 PELWGAD 363


>sp|RS4E_METHJ|SMALL ribosomal subunit protein eS4|Methanospirillum hungatei JF-1

Query: 4 WGEDEMG 10
W D+MG
Sbjct: 42 WARDQMG 48


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 3 FWGED 7
FWGED
Sbjct: 926 FWGED 930


>sp|SYT_THESM|THREONINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 DFWGEDE 8
DFW E++
Sbjct: 393 DFWNENK 399


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FWGED 7
FWG+D
Sbjct: 336 FWGKD 340


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 FWGED 7
FWG+D
Sbjct: 336 FWGKD 340


>sp|HEM1_HALMA|GLUTAMYL-TRNA reductase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PDFWGEDE 8
PDF G D+
Sbjct: 407 PDFGGPDQ 414


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 FWGED 7
FWG+D
Sbjct: 385 FWGKD 389


>sp|OGT_METAC|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PDFWGEDE 8
PD W E+E
Sbjct: 37 PDSWVENE 44


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PDFWGEDE 8
P F+GE+E
Sbjct: 299 PIFYGEEE 306




44|SequenceR|225|216|QLLCWPDFWG

>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 LCWPDFW 9
L W DFW
Sbjct: 865 LLWCDFW 871


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 5 WPDFW 9
W DFW
Sbjct: 841 WEDFW 845


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LLCWPDFWG 10
LLC D WG
Sbjct: 270 LLCGADDWG 278


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 QLLCWPDFWG 10
Q L +PD++G
Sbjct: 526 QALGYPDYYG 535


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 WPDFW 9
WPDF+
Sbjct: 50 WPDFF 54


>sp|Y042_METJA|UNCHARACTERIZED protein MJ0042|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CWPDFW 9
CW FW
Sbjct: 205 CWIAFW 210


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 WPDFWG 10
WP WG
Sbjct: 192 WPSPWG 197


>sp|HMGCS_THEVO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 6 PDFW 9
PDFW
Sbjct: 183 PDFW 186


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 6 PDFW 9
PDFW
Sbjct: 188 PDFW 191


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 6 PDFW 9
PDFW
Sbjct: 188 PDFW 191


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 PDFW 9
PDFW
Sbjct: 188 PDFW 191


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 6 PDFW 9
PDFW
Sbjct: 188 PDFW 191


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 6 PDFW 9
PDFW
Sbjct: 183 PDFW 186


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 6 PDFW 9
PDFW
Sbjct: 184 PDFW 187


>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 6 PDFW 9
PDFW
Sbjct: 184 PDFW 187


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 PDFW 9
PDFW
Sbjct: 186 PDFW 189


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 6 PDFW 9
PDFW
Sbjct: 186 PDFW 189


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 6 PDFW 9
PDFW
Sbjct: 186 PDFW 189


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 6 PDFW 9
PDFW
Sbjct: 186 PDFW 189


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 6 PDFW 9
PDFW
Sbjct: 186 PDFW 189


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 6 PDFW 9
PDFW
Sbjct: 186 PDFW 189


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 6 PDFW 9
PDFW
Sbjct: 186 PDFW 189


>sp|HMGCS_PYRNV|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 6 PDFW 9
PDFW
Sbjct: 185 PDFW 188


>sp|HMGCS_PYRIL|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 6 PDFW 9
PDFW
Sbjct: 185 PDFW 188


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 PDFW 9
PDFW
Sbjct: 188 PDFW 191


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 PDFW 9
PDFW
Sbjct: 188 PDFW 191


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 6 PDFW 9
PDFW
Sbjct: 185 PDFW 188


>sp|HMGCS_PYRAR|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 6 PDFW 9
PDFW
Sbjct: 184 PDFW 187


>sp|HMGCS_PYRAE|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 PDFW 9
PDFW
Sbjct: 185 PDFW 188


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 6 PDFW 9
PDFW
Sbjct: 188 PDFW 191


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 6 PDFW 9
PDFW
Sbjct: 183 PDFW 186


>sp|HMGCS_METVS|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 6 PDFW 9
PDFW
Sbjct: 187 PDFW 190


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 6 PDFW 9
PDFW
Sbjct: 183 PDFW 186


>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 6 PDFW 9
PDFW
Sbjct: 187 PDFW 190


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 6 PDFW 9
PDFW
Sbjct: 184 PDFW 187


>sp|HMGCS_METMP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 6 PDFW 9
PDFW
Sbjct: 187 PDFW 190


>sp|HMGCS_METMA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 PDFW 9
PDFW
Sbjct: 186 PDFW 189


>sp|HMGCS_METM7|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C7 /

Query: 6 PDFW 9
PDFW
Sbjct: 187 PDFW 190


>sp|HMGCS_METM6|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C6 /

Query: 6 PDFW 9
PDFW
Sbjct: 187 PDFW 190


>sp|HMGCS_METM5|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C5 /

Query: 6 PDFW 9
PDFW
Sbjct: 187 PDFW 190


>sp|HMGCS_METKA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanopyrus kandleri (strain AV19 /

Query: 6 PDFW 9
PDFW
Sbjct: 188 PDFW 191


>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 PDFW 9
PDFW
Sbjct: 183 PDFW 186


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 6 PDFW 9
PDFW
Sbjct: 186 PDFW 189


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 6 PDFW 9
PDFW
Sbjct: 186 PDFW 189


>sp|HMGCS_METAR|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocella arvoryzae (strain DSM 22066

Query: 6 PDFW 9
PDFW
Sbjct: 183 PDFW 186


>sp|HMGCS_METAC|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 PDFW 9
PDFW
Sbjct: 186 PDFW 189


>sp|HMGCS_CALMQ|HYDROXYMETHYLGLUTARYL-COA synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 6 PDFW 9
PDFW
Sbjct: 184 PDFW 187


>sp|HMGCS_ARCFU|HYDROXYMETHYLGLUTARYL-COA synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 PDFW 9
PDFW
Sbjct: 182 PDFW 185


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 6 PDFW 9
PDFW
Sbjct: 196 PDFW 199


>sp|AROD_THEON|3-DEHYDROQUINATE dehydratase|Thermococcus onnurineus (strain NA1)

Query: 6 PDFW 9
PDFW
Sbjct: 118 PDFW 121


>sp|PUS10_CENSY|TRNA pseudouridine synthase Pus10|Cenarchaeum symbiosum (strain A)

Query: 4 CWPDFWG 10
C P WG
Sbjct: 58 CGPSLWG 64


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLCWPDFWG 10
LC P WG
Sbjct: 1082 FLCPPSKWG 1090


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 1 QLLCWPDFWG 10
Q + WPD+ G
Sbjct: 49 QGILWPDWKG 58


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 4 CWPDFW 9
CW W
Sbjct: 192 CWASLW 197


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 CWPDFW 9
CW W
Sbjct: 189 CWASLW 194


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 CWPDFW 9
CW W
Sbjct: 189 CWASLW 194


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WPDFW 9
WP FW
Sbjct: 357 WPFFW 361


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 LLCWPDFWG 10
L C P WG
Sbjct: 71 LHCAPTMWG 79


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 5 WPDFW 9
W D+W
Sbjct: 11 WKDYW 15


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 WPDFW 9
W D+W
Sbjct: 273 WKDYW 277


>sp|UPPS_AERPE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Aeropyrum pernix

Query: 3 LCWPDFW 9
LC+ FW
Sbjct: 139 LCYDPFW 145


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 WPDFW 9
W D+W
Sbjct: 274 WEDYW 278


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 5 WPDFW 9
W DFW
Sbjct: 588 WYDFW 592


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QLLCWPDF 8
LL WP++
Sbjct: 719 HLLSWPEY 726


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 QLLCWPDF 8
LL WP++
Sbjct: 719 HLLSWPEY 726


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 WPDFW 9
W D+W
Sbjct: 278 WKDYW 282




45|SequenceR|230|221|KRRLGQLLCW

>sp|PHS_SULAC|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Sulfolobus

Query: 1 KRRLGQLLCW 10
KRRLG++ W
Sbjct: 9 KRRLGEIEGW 18


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 2 RRLGQLLCW 10
RRLG +L W
Sbjct: 382 RRLGVVLAW 390


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 2 RRLGQLLCW 10
RRLG +L W
Sbjct: 382 RRLGVVLAW 390


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 KRRLGQLLCW 10
KRR+G+L+ +
Sbjct: 662 KRRIGELVAY 671


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 KRRLGQLL 8
+RRLG+LL
Sbjct: 295 ERRLGKLL 302


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RLGQLLC 9
RLG++LC
Sbjct: 328 RLGKILC 334


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 2 RRLGQLLCW 10
RRLG L W
Sbjct: 382 RRLGIALAW 390


>sp|PGMI_AERPE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Aeropyrum pernix (strain

Query: 1 KRRLGQLL 8
KRRLG+ L
Sbjct: 322 KRRLGEAL 329


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 2 RRLGQLLCW 10
RRLG + W
Sbjct: 382 RRLGVAIAW 390




46|SequenceR|235|226|GLSQVKRRLG

>sp|CDPAS_METB6|CDP-ARCHAEOL synthase|Methanoregula boonei (strain DSM 21154

Query: 1 GLSQVKRRLG 10
G S +KRRLG
Sbjct: 88 GKSFIKRRLG 97


>sp|PHS_SULAC|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Sulfolobus

Query: 3 SQVKRRLG 10
+++KRRLG
Sbjct: 6 NEIKRRLG 13


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LSQVKRRL 9
L++VKRRL
Sbjct: 401 LNEVKRRL 408


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 GLSQVKRRLG 10
GL++++ RLG
Sbjct: 417 GLAEIEERLG 426


>sp|RL14E_THEKO|LARGE ribosomal subunit protein eL14|Thermococcus kodakarensis (strain

Query: 1 GLSQVKRR 8
GL++VKRR
Sbjct: 39 GLNKVKRR 46




47|SequenceR|240|231|QCFLVGLSQV

>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 QCFLVGLSQV 10
QC+ +G+ +V
Sbjct: 41 QCYTIGIKEV 50


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CFLVGLSQV 10
C+L+GL +V
Sbjct: 429 CWLIGLDEV 437


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 FLVGLSQ 9
FLVG+SQ
Sbjct: 99 FLVGISQ 105


>sp|PGK1_METAC|PHOSPHOGLYCERATE kinase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QCFLVGLSQV 10
QC +VG ++V
Sbjct: 164 QCSVVGFTEV 173


>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 QCFLVGLS 8
Q FL+GLS
Sbjct: 98 QAFLMGLS 105




48|SequenceR|245|236|RTVEGQCFLV

>sp|RSMA_METJA|PROBABLE ribosomal RNA small subunit|Methanocaldococcus jannaschii (strain

Query: 5 GQCFLV 10
GQCFL+
Sbjct: 9 GQCFLI 14


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 2 TVEGQCFLV 10
T++G CF++
Sbjct: 40 TIDGICFVL 48




49|SequenceR|250|241|SSSVFRTVEG

>sp|HIS3_METLZ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SSSVFRTVEG 10
+S FRT+EG
Sbjct: 98 ASCFFRTMEG 107


>sp|HIS3_METMJ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SSSVFRTVEG 10
+S +RTVEG
Sbjct: 93 ASCFYRTVEG 102




50|SequenceR|255|246|TLMRQSSSVF

***** No hits found ******


51|SequenceR|260|251|AKDDTTLMRQ

>sp|PYRB_HALSA|ASPARTATE carbamoyltransferase catalytic subunit|Halobacterium salinarum

Query: 1 AKDDTTLMR 9
AKDD T+M
Sbjct: 254 AKDDLTIMH 262


>sp|PYRB_HALMA|ASPARTATE carbamoyltransferase catalytic subunit|Haloarcula marismortui

Query: 1 AKDDTTLMR 9
AKDD T+M
Sbjct: 253 AKDDLTVMH 261


>sp|PYRB_NATPD|ASPARTATE carbamoyltransferase catalytic subunit|Natronomonas pharaonis

Query: 1 AKDDTTLMR 9
AKDD T+M
Sbjct: 253 AKDDLTVMH 261


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 1 AKDDTTL 7
AKD+TTL
Sbjct: 109 AKDETTL 115


>sp|PGK_THEVO|PHOSPHOGLYCERATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 AKDDTTLMRQ 10
KDD T +RQ
Sbjct: 65 GKDDFTSLRQ 74




52|SequenceR|265|256|RKLVVAKDDT

>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RKLVVAKD 8
RK+VV+KD
Sbjct: 252 RKMVVSKD 259


>sp|F16PA_HALSA|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 LVVAKDDT 10
+VVA+DDT
Sbjct: 133 MVVARDDT 140


>sp|F16PA_HALS3|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 29341

Query: 3 LVVAKDDT 10
+VVA+DDT
Sbjct: 133 MVVARDDT 140


>sp|CDC62_METTH|ORC1-TYPE DNA replication protein 2|Methanothermobacter thermautotrophicus

Query: 1 RKLVVAKDD 9
R LVVA DD
Sbjct: 141 RALVVALDD 149


>sp|LYSY_THEKO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 RKLVVAKDD 9
RKL+V KD+
Sbjct: 241 RKLLVYKDE 249


>sp|Y1426_METJA|UNCHARACTERIZED protein MJ1426|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKLVVAKDD 9
RK++VAK D
Sbjct: 119 RKVIVAKPD 127




53|SequenceR|270|261|HVEHIRKLVV

>sp|PGK_THEVO|PHOSPHOGLYCERATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HVEHIRKL 8
HVE IRKL
Sbjct: 43 HVETIRKL 50


>sp|KTHY_METAC|PROBABLE thymidylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HVEHIRKLV 9
H EH+ KLV
Sbjct: 71 HAEHLAKLV 79


>sp|KTHY_METMA|PROBABLE thymidylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HVEHIRKLV 9
H EH+ KLV
Sbjct: 71 HAEHLAKLV 79


>sp|KTHY_METBF|PROBABLE thymidylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HVEHIRKLV 9
H EH+ KL+
Sbjct: 71 HAEHLAKLI 79


>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 HVEHIR 6
H EHIR
Sbjct: 55 HAEHIR 60


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HVEHIRKLVV 10
HV+HI VV
Sbjct: 314 HVQHIESEVV 323


>sp|AATB_STAMF|A-TYPE ATP synthase subunit B|Staphylothermus marinus (strain ATCC 43588

Query: 2 VEHIRK 7
+EHIRK
Sbjct: 453 IEHIRK 458


>sp|T1MH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 3 EHIRKLV 9
EHI+K+V
Sbjct: 465 EHIKKIV 471


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HVEHIRKL 8
HVE++R+L
Sbjct: 197 HVEYMRRL 204


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VEHIRKLVV 10
VE++ KLVV
Sbjct: 382 VEYVTKLVV 390


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HVEHIRKL 8
H EH RK+
Sbjct: 11 HKEHARKI 18


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 EHIRKL 8
EH+RKL
Sbjct: 86 EHVRKL 91


>sp|NADE_PYRFU|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VEHIRKLV 9
VEH+ KLV
Sbjct: 228 VEHVEKLV 235




54|SequenceR|275|266|RDMKVHVEHI

>sp|K6PF_PYRHO|ADP-SPECIFIC phosphofructokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RDMKVHVE 8
+D+K+HVE
Sbjct: 253 KDVKIHVE 260


>sp|K6PF_PYRAB|ADP-SPECIFIC phosphofructokinase|Pyrococcus abyssi (strain GE5 /

Query: 2 DMKVHVE 8
D+KVHVE
Sbjct: 255 DVKVHVE 261


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 1 RDMKVHVE 8
+D+KVH+E
Sbjct: 261 KDLKVHLE 268


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 RDMKVH 6
RD+KVH
Sbjct: 221 RDLKVH 226


>sp|K6PF_THEKO|ADP-SPECIFIC phosphofructokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RDMKVHVE 8
+D+KVH+E
Sbjct: 261 KDVKVHLE 268


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RDMKVHVE 8
+D+K+HVE
Sbjct: 256 KDIKIHVE 263


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DMKVHVEH 9
DMK HVE+
Sbjct: 165 DMKEHVEY 172


>sp|ARLY_PYRAR|ARGININOSUCCINATE lyase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 MKVHVEHI 10
MK HV H+
Sbjct: 36 MKAHVTHL 43


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RDMKVHVEHI 10
+D+K HVE +
Sbjct: 337 KDIKEHVEEL 346


>sp|RNP3_METKA|RIBONUCLEASE P protein component 3|Methanopyrus kandleri (strain AV19 /

Query: 1 RDMKVHVEHI 10
RD++ HVE +
Sbjct: 57 RDIREHVESV 66




55|SequenceR|280|271|QYELSRDMKV

>sp|AROE_THEKO|SHIKIMATE dehydrogenase (NADP(+))|Thermococcus kodakarensis (strain ATCC

Query: 2 YELSRDMKV 10
YELSRD +V
Sbjct: 139 YELSRDNEV 147


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 1 QYELSRDMKV 10
QY RD K+
Sbjct: 132 QYRFGRDFKI 141


>sp|Y1761_METMA|MEMO1 family protein MM_1761|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QYELSRDMKV 10
QY RD K+
Sbjct: 132 QYRFERDFKI 141


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 QYELSRD 7
QYE+S+D
Sbjct: 132 QYEVSKD 138


>sp|DHYS_PICTO|PROBABLE deoxyhypusine synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 YELSRDMKV 10
YE++RD ++
Sbjct: 204 YEMNRDFRI 212


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YELSRDMKV 10
Y+LSR MK+
Sbjct: 334 YDLSRHMKM 342


>sp|RNP4_SULAC|RIBONUCLEASE P protein component 4|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QYELSRDMK 9
+YEL RD K
Sbjct: 93 RYELKRDSK 101


>sp|SYY_ARCFU|TYROSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QYELSRD 7
+Y+LSRD
Sbjct: 114 EYQLSRD 120




56|SequenceR|285|276|ACEVPQYELS

>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 ACEVPQYELS 10
ACE P +E+S
Sbjct: 177 ACEGPVFEMS 186


>sp|PUR5_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 EVPQYELS 10
E+P+YE+S
Sbjct: 326 EIPKYEVS 333


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 VPQYEL 9
+PQYEL
Sbjct: 480 IPQYEL 485


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 4 VPQYEL 9
+PQYEL
Sbjct: 479 IPQYEL 484


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 EVPQYEL 9
EVP+YE+
Sbjct: 426 EVPKYEM 432


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 VPQYEL 9
+PQYEL
Sbjct: 479 IPQYEL 484


>sp|DHYS_SACI7|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 EVPQYEL 9
E+P YEL
Sbjct: 157 EIPAYEL 163


>sp|DHYS_SACI6|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 EVPQYEL 9
E+P YEL
Sbjct: 157 EIPAYEL 163


>sp|DHYS_SACI4|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 EVPQYEL 9
E+P YEL
Sbjct: 157 EIPAYEL 163


>sp|DHYS_SACI3|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.27)

Query: 3 EVPQYEL 9
E+P YEL
Sbjct: 157 EIPAYEL 163


>sp|DHYS_SACI2|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 EVPQYEL 9
E+P YEL
Sbjct: 157 EIPAYEL 163


>sp|DHYS_SACI1|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 EVPQYEL 9
E+P YEL
Sbjct: 157 EIPAYEL 163


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EVPQYEL 9
E P+YEL
Sbjct: 384 EAPEYEL 390


>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ACEVPQYE 8
+C++P Y+
Sbjct: 149 SCQIPNYK 156


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 2 CEVPQYEL 9
C +PQY
Sbjct: 345 CPIPQYNF 352


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 CEVPQYEL 9
C++P+Y++
Sbjct: 659 CKIPEYKV 666


>sp|SELD_METKA|SELENIDE, water dikinase|Methanopyrus kandleri (strain AV19 /

Query: 1 ACEVPQYEL 9
AC++PQ +L
Sbjct: 17 ACKLPQGDL 25


>sp|COMD_METJA|SULFOPYRUVATE decarboxylase subunit alpha|Methanocaldococcus jannaschii (strain

Query: 2 CEVPQYE 8
CE+P Y+
Sbjct: 123 CEIPTYK 129




57|SequenceR|290|281|ANIVIACEVP

>sp|SPSS1_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanoregula boonei (strain DSM 21154

Query: 5 IACEVP 10
+ACE+P
Sbjct: 123 VACEIP 128


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 2 NIVIACEVP 10
N++I EVP
Sbjct: 324 NVIIKIEVP 332


>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NIVIACEVP 10
N+V +C++P
Sbjct: 145 NVVGSCQIP 153


>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ANIVIACEVP 10
A VIACEV
Sbjct: 66 AMTVIACEVK 75




58|SequenceR|295|286|SWAGAANIVI

>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 1 SWAGAANIVI 10
+W +NIVI
Sbjct: 308 AWGDTSNIVI 317


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 3 AGAANIV 9
AGAANI+
Sbjct: 463 AGAANII 469


>sp|RL37A_AERPE|LARGE ribosomal subunit protein eL43|Aeropyrum pernix (strain ATCC

Query: 1 SWAGAA 6
+WAGAA
Sbjct: 63 TWAGAA 68


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SWAGAANI 8
SW GAA +
Sbjct: 1103 SWIGAAQV 1110




59|SequenceR|300|291|AAIQASWAGA

>sp|GCSPA_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 AAIQASWAGA 10
AAI A+W GA
Sbjct: 337 AAIHAAWLGA 346


>sp|GCSPA_HALS3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 AAIQASWAGA 10
AAI A+W GA
Sbjct: 337 AAIHAAWLGA 346


>sp|URED_HALWD|UREASE accessory protein UreD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AAIQASW 7
AAI+A+W
Sbjct: 281 AAIEAAW 287




60|SequenceR|305|296|GVGALAAIQA

>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 2 VGALAAIQA 10
VGALAA+ A
Sbjct: 170 VGALAALGA 178


>sp|TIAS_ARCFU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Archaeoglobus fulgidus (strain

Query: 2 VGALAAIQA 10
+GALAA+ A
Sbjct: 143 IGALAAVGA 151


>sp|YR33_THEPE|UNCHARACTERIZED 33.4 kDa protein in|Thermofilum pendens

Query: 1 GVGALAAI 8
G+GALA +
Sbjct: 113 GIGALAVV 120




61|SequenceR|310|301|GPPGEGVGAL

>sp|KCY_METPE|CYTIDYLATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GPPGEGVGAL 10
GPPG G +L
Sbjct: 7 GPPGSGTTSL 16


>sp|KCY_METTP|CYTIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GPPGEGVGAL 10
GPPG G L
Sbjct: 7 GPPGSGTSTL 16


>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GPPGEGVG 8
GPPG G G
Sbjct: 7 GPPGAGKG 14


>sp|KAD_ARCFU|ADENYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GPPGEGVG 8
GPPG G G
Sbjct: 7 GPPGAGKG 14


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GPPGEGVGAL 10
GPPG G +L
Sbjct: 388 GPPGTGKTSL 397


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GPPGEGVGAL 10
GPP GVGA
Sbjct: 70 GPPIGGVGAF 79


>sp|KCY_METMJ|CYTIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GPPGEGVGAL 10
GPPG G +L
Sbjct: 7 GPPGSGTTSL 16


>sp|DPCKG_ARCFU|GTP-DEPENDENT dephospho-CoA kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GPPGEGVGAL 10
G PGEGV AL
Sbjct: 144 GQPGEGVVAL 153


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 GPPGEG 6
GPPG G
Sbjct: 54 GPPGSG 59


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GPPGEG 6
GPPG G
Sbjct: 50 GPPGSG 55


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GPPGEG 6
GPPG G
Sbjct: 50 GPPGSG 55


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 50 GPPGSG 55


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 GPPGEG 6
GPPG G
Sbjct: 46 GPPGSG 51


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM

Query: 1 GPPGEG 6
GPPG G
Sbjct: 46 GPPGSG 51


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 46 GPPGSG 51


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 46 GPPGSG 51


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 46 GPPGSG 51


>sp|RADB_METST|DNA repair and recombination protein|Methanosphaera stadtmanae

Query: 1 GPPGEG 6
GPPG G
Sbjct: 37 GPPGSG 42


>sp|RADB_METS3|DNA repair and recombination protein|Methanobrevibacter smithii

Query: 1 GPPGEG 6
GPPG G
Sbjct: 37 GPPGSG 42


>sp|PSTK_METKA|L-SERYL-TRNA(SEC) kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 8 GPPGSG 13


>sp|KCY_SULTO|CYTIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KCY_SULAC|CYTIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KCY_SACS2|CYTIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KCY_SACI7|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KCY_SACI6|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KCY_SACI4|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KCY_SACI3|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KCY_SACI2|CYTIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KCY_SACI1|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KCY_DESA1|CYTIDYLATE kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 GPPGEG 6
GPPG G
Sbjct: 8 GPPGSG 13


>sp|KCY_ARCFU|CYTIDYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KCY_AERPE|CYTIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GPPGEG 6
GPPG G
Sbjct: 4 GPPGSG 9


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KCY_HALSA|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KCY_HALS3|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KAD_HALMA|ADENYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPPGEGVG 8
GPPG G G
Sbjct: 10 GPPGAGKG 17


>sp|KAD_METBF|ADENYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GPPGEGVG 8
GPPG G G
Sbjct: 7 GPPGAGKG 14


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|CDC6V_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 1 GPPGEG 6
GPPG G
Sbjct: 54 GPPGSG 59


>sp|CDC6Z_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 1 GPPGEG 6
GPPG G
Sbjct: 54 GPPGSG 59


>sp|KAD_METMA|ADENYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPPGEGVG 8
GPPG G G
Sbjct: 7 GPPGAGKG 14


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 GPPGEG 6
GPPG G
Sbjct: 291 GPPGSG 296


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPPGEGVGAL 10
GPPG+ GA+
Sbjct: 333 GPPGDDRGAV 342


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GPPGEGVGA 9
GPPG G A
Sbjct: 45 GPPGTGKTA 53


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GPPGEGVG 8
GPPG G G
Sbjct: 7 GPPGSGKG 14


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 1 GPPGEG 6
GPPG G
Sbjct: 207 GPPGTG 212


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 1 GPPGEG 6
GPPG G
Sbjct: 44 GPPGTG 49


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GPPGEG 6
GPPG G
Sbjct: 47 GPPGTG 52


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GPPGEG 6
GPPG G
Sbjct: 45 GPPGTG 50


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 GPPGEG 6
GPPG G
Sbjct: 51 GPPGTG 56


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 GPPGEG 6
GPPG G
Sbjct: 48 GPPGTG 53


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GPPGEG 6
GPPG G
Sbjct: 44 GPPGTG 49


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GPPGEG 6
GPPG G
Sbjct: 42 GPPGTG 47


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 51 GPPGTG 56


>sp|RFCS_AERPE|REPLICATION factor C small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 GPPGEG 6
GPPG G
Sbjct: 47 GPPGTG 52


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GPPGEG 6
GPPG G
Sbjct: 44 GPPGTG 49


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GPPGEG 6
GPPG G
Sbjct: 44 GPPGTG 49


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GPPGEG 6
GPPG G
Sbjct: 44 GPPGTG 49


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GPPGEG 6
GPPG G
Sbjct: 44 GPPGTG 49


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GPPGEG 6
GPPG G
Sbjct: 44 GPPGTG 49


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GPPGEG 6
GPPG G
Sbjct: 75 GPPGTG 80


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 1 GPPGEG 6
GPPG G
Sbjct: 45 GPPGTG 50


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 GPPGEG 6
GPPG G
Sbjct: 191 GPPGTG 196


>sp|KCY_HALWD|CYTIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGAG 12


>sp|KAD_METBU|ADENYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GPPGEGVG 8
GPPG G G
Sbjct: 7 GPPGAGKG 14


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GPPGEG 6
GPPG G
Sbjct: 9 GPPGAG 14


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC

Query: 1 GPPGEG 6
GPPG G
Sbjct: 62 GPPGTG 67


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC

Query: 1 GPPGEG 6
GPPG G
Sbjct: 59 GPPGTG 64


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 1 GPPGEG 6
GPPG G
Sbjct: 59 GPPGTG 64


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 189 GPPGTG 194


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 220 GPPGTG 225


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPPGEG 6
GPPG G
Sbjct: 189 GPPGTG 194


>sp|KCY_HALLT|CYTIDYLATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 189 GPPGTG 194


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPPGEG 6
GPPG G
Sbjct: 161 GPPGTG 166


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 7 GPPGSG 12


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GPPGEG 6
GPPG G
Sbjct: 44 GPPGTG 49


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GPPGEG 6
GPPG G
Sbjct: 189 GPPGTG 194


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GPPGEG 6
GPPG G
Sbjct: 194 GPPGTG 199


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 189 GPPGTG 194


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPPGEG 6
GPPG G
Sbjct: 281 GPPGSG 286


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 48 GPPGTG 53


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 GPPGEG 6
GPPG G
Sbjct: 193 GPPGTG 198


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 GPPGEGVGAL 10
GPPG G +L
Sbjct: 363 GPPGTGKTSL 372


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 175 GPPGTG 180


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 175 GPPGTG 180


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 175 GPPGTG 180


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GPPGEG 6
GPPG G
Sbjct: 175 GPPGTG 180


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 175 GPPGTG 180


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GPPGEG 6
GPPG G
Sbjct: 175 GPPGTG 180


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GPPGEG 6
GPPG G
Sbjct: 189 GPPGTG 194


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GPPGEG 6
GPPG G
Sbjct: 194 GPPGTG 199


>sp|RADB_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 1 GPPGEG 6
GPPG G
Sbjct: 37 GPPGSG 42


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 1 GPPGEG 6
GPPG G
Sbjct: 266 GPPGSG 271


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GPPGEG 6
GPPG G
Sbjct: 175 GPPGTG 180


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPPGEG 6
GPPG G
Sbjct: 211 GPPGTG 216


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GPPGEG 6
GPPG G
Sbjct: 194 GPPGTG 199


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GPPGEG 6
GPPG G
Sbjct: 253 GPPGTG 258


Query: 1 GPPGEG 6
GPPG G
Sbjct: 528 GPPGTG 533


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GPPGEG 6
GPPG G
Sbjct: 192 GPPGTG 197


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GPPGEG 6
GPPG G
Sbjct: 175 GPPGTG 180


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 GPPGEG 6
GPPG G
Sbjct: 219 GPPGTG 224


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 1 GPPGEGVGAL 10
GPPG G L
Sbjct: 52 GPPGAGKSTL 61


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GPPGEG 6
GPPG G
Sbjct: 200 GPPGTG 205


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPPGEG 6
GPPG G
Sbjct: 193 GPPGTG 198


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GPPGEGVGAL 10
GPPG G L
Sbjct: 54 GPPGAGKSTL 63


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GPPGEG 6
GPPG G
Sbjct: 182 GPPGTG 187


>sp|LEU3_SACS2|3-ISOPROPYLMALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PGEGVG 8
PG+G+G
Sbjct: 9 PGDGIG 14


>sp|Y521_ARCFU|UNCHARACTERIZED N-acetyltransferase AF_0521|Archaeoglobus fulgidus (strain ATCC

Query: 4 GEGVGA 9
GEG+GA
Sbjct: 93 GEGIGA 98


>sp|LEUC2_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 GPPGEGV 7
PPGEG+
Sbjct: 92 NPPGEGI 98


>sp|Y950_SULTO|UPF0200 protein STK_09500|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GPPGEGVGAL 10
G PG G G L
Sbjct: 11 GMPGSGKGEL 20


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GPPGEG 6
GPPG G
Sbjct: 231 GPPGTG 236


>sp|CBID_METMJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PGEGVGAL 10
PGEG+G+
Sbjct: 126 PGEGIGSF 133


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 GPPGEGVGAL 10
G PG GV L
Sbjct: 315 GKPGTGVNPL 324




62|SequenceR|315|306|TGQLTGPPGE

>sp|PSTK_METKA|L-SERYL-TRNA(SEC) kinase|Methanopyrus kandleri (strain AV19 /

Query: 4 LTGPPG 9
LTGPPG
Sbjct: 6 LTGPPG 11


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LTGPPG 9
+TGPPG
Sbjct: 7 ITGPPG 12


>sp|IF2G_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 2 GQLTGPPG 9
GQ+ GPPG
Sbjct: 310 GQVAGPPG 317


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 2 GQLTGPPG 9
GQ+ GPPG
Sbjct: 311 GQVAGPPG 318


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 2 GQLTGPPG 9
GQ+ GPPG
Sbjct: 311 GQVAGPPG 318


>sp|IF2G_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 2 GQLTGPPG 9
GQ+ GPPG
Sbjct: 310 GQVAGPPG 317


>sp|NTPTH_CALMQ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 LTGPPG 9
+TGPPG
Sbjct: 7 VTGPPG 12


>sp|RADB_METMP|DNA repair and recombination protein|Methanococcus maripaludis

Query: 3 QLTGPPG 9
Q+ GPPG
Sbjct: 17 QIYGPPG 23


>sp|RADB_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 3 QLTGPPG 9
Q+ GPPG
Sbjct: 17 QIYGPPG 23


>sp|RADB_METM7|DNA repair and recombination protein|Methanococcus maripaludis

Query: 3 QLTGPPG 9
Q+ GPPG
Sbjct: 17 QIYGPPG 23


>sp|RADB_METM5|DNA repair and recombination protein|Methanococcus maripaludis

Query: 3 QLTGPPG 9
Q+ GPPG
Sbjct: 17 QIYGPPG 23


>sp|RADB_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 3 QLTGPPG 9
Q+ GPPG
Sbjct: 17 QIYGPPG 23


>sp|RADB_METS3|DNA repair and recombination protein|Methanobrevibacter smithii

Query: 3 QLTGPPG 9
Q+ GPPG
Sbjct: 34 QIFGPPG 40


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 2 GQLTGPPG 9
G L GPPG
Sbjct: 262 GVLVGPPG 269


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 4 LTGPPG 9
+TGPPG
Sbjct: 50 ITGPPG 55


>sp|NTPTH_IGNH4|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 LTGPPG 9
+TGPPG
Sbjct: 6 ITGPPG 11


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 4 LTGPPG 9
L GPPG
Sbjct: 48 LAGPPG 53


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LTGPPG 9
L GPPG
Sbjct: 48 LAGPPG 53


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LTGPPG 9
L GPPG
Sbjct: 48 LAGPPG 53


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 LTGPPG 9
L GPPG
Sbjct: 61 LAGPPG 66


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LTGPPG 9
L GPPG
Sbjct: 61 LAGPPG 66


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 LTGPPG 9
L GPPG
Sbjct: 48 LAGPPG 53


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 4 LTGPPG 9
L GPPG
Sbjct: 43 LVGPPG 48


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LTGPPG 9
L GPPG
Sbjct: 41 LAGPPG 46


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC

Query: 4 LTGPPG 9
L GPPG
Sbjct: 57 LVGPPG 62


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 4 LTGPPG 9
L GPPG
Sbjct: 57 LVGPPG 62


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LTGPPG 9
+TGPPG
Sbjct: 52 ITGPPG 57


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 3 QLTGPPG 9
+TGPPG
Sbjct: 21 HVTGPPG 27


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GQLTGPPG 9
G + GPPG
Sbjct: 166 GIIDGPPG 173


>sp|MAP2_METTH|METHIONINE aminopeptidase|Methanothermobacter thermautotrophicus (strain

Query: 1 TGQLTGPPGE 10
T T PPG+
Sbjct: 62 TAHYTSPPGD 71


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 4 LTGPPG 9
L GPPG
Sbjct: 44 LAGPPG 49


>sp|CDC66_HALSA|ORC1-TYPE DNA replication protein 6|Halobacterium salinarum (strain ATCC

Query: 2 GQLTGPPG 9
G+L+G PG
Sbjct: 77 GELSGQPG 84


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GQLTGPPG 9
G LTGP G
Sbjct: 582 GILTGPAG 589


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain

Query: 4 LTGPPG 9
L GPPG
Sbjct: 57 LVGPPG 62


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 1 TGQLTGPPG 9
TGQ+ G PG
Sbjct: 329 TGQMAGVPG 337


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM

Query: 4 LTGPPG 9
L GPPG
Sbjct: 44 LAGPPG 49


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 4 LTGPPG 9
L GPPG
Sbjct: 44 LAGPPG 49


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 4 LTGPPG 9
L GPPG
Sbjct: 44 LAGPPG 49


>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 4 LTGPPG 9
L+GPPG
Sbjct: 177 LSGPPG 182


>sp|RS6E_SACI6|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 4 LTGPPG 9
L+GPPG
Sbjct: 177 LSGPPG 182


>sp|RS6E_SACI3|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 4 LTGPPG 9
L+GPPG
Sbjct: 177 LSGPPG 182


>sp|RS6E_SACI2|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 4 LTGPPG 9
L+GPPG
Sbjct: 177 LSGPPG 182


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 TGQLTGPPG 9
TGQ+ G PG
Sbjct: 341 TGQIAGVPG 349


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 4 LTGPPG 9
L GPPG
Sbjct: 54 LVGPPG 59


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 LTGPPG 9
L GPPG
Sbjct: 54 LVGPPG 59


>sp|RS6E_SACI7|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 4 LTGPPG 9
L+GPPG
Sbjct: 177 LSGPPG 182


>sp|RS6E_SACI4|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 4 LTGPPG 9
L+GPPG
Sbjct: 177 LSGPPG 182


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 TGQLTGPPG 9
+G GPPG
Sbjct: 276 SGVFVGPPG 284


>sp|RL1_CENSY|LARGE ribosomal subunit protein uL1|Cenarchaeum symbiosum (strain A)

Query: 2 GQLTGPPGE 10
GQ+ GP G+
Sbjct: 119 GQILGPRGK 127


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC

Query: 4 LTGPPG 9
L GPPG
Sbjct: 54 LVGPPG 59


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 3 QLTGPPGE 10
++ GPPG+
Sbjct: 342 EIYGPPGD 349


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 4 LTGPPG 9
L GPPG
Sbjct: 218 LVGPPG 223


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain ATCC

Query: 4 LTGPPG 9
L+GPPG
Sbjct: 178 LSGPPG 183


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 4 LTGPPG 9
L+GPPG
Sbjct: 176 LSGPPG 181


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 LTGPPG 9
L GPPG
Sbjct: 50 LVGPPG 55


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LTGPPG 9
L GPPG
Sbjct: 50 LVGPPG 55


>sp|MCT_HALMA|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TGQLTGPP 8
TGQ GPP
Sbjct: 159 TGQSDGPP 166


>sp|MCT_HALHT|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula hispanica (strain ATCC 33960

Query: 1 TGQLTGPP 8
TGQ GPP
Sbjct: 159 TGQSDGPP 166




63|SequenceR|320|311|EVPLKTGQLT

>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 1 EVPLKTGQLT 10
EVPL TGQ T
Sbjct: 205 EVPLITGQRT 214


>sp|AATA_THEKO|A-TYPE ATP synthase subunit A|Thermococcus kodakarensis (strain ATCC

Query: 1 EVPLKTGQLT 10
EVPL TGQ T
Sbjct: 205 EVPLITGQRT 214


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EVPLKTGQLT 10
EVPL TGQ T
Sbjct: 205 EVPLITGQRT 214


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 1 EVPLKTGQLT 10
EVPL TGQ T
Sbjct: 205 EVPLITGQRT 214


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 1 EVPLKTGQLT 10
EVPL TGQ T
Sbjct: 205 EVPLVTGQRT 214


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 1 EVPLKTGQLT 10
EVPL TGQ T
Sbjct: 205 EVPLITGQRT 214


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VPLKTGQL 9
VPLKTG L
Sbjct: 201 VPLKTGIL 208


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EVPLKTGQ 8
E+PL TGQ
Sbjct: 203 EIPLVTGQ 210


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EVPLKTGQ 8
EVPL TGQ
Sbjct: 208 EVPLVTGQ 215


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EVPLKTGQ 8
E+PL TGQ
Sbjct: 203 EIPLVTGQ 210


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EVPLKTGQ 8
EVPL TGQ
Sbjct: 201 EVPLLTGQ 208


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EVPLKTGQ 8
EVPL TGQ
Sbjct: 208 EVPLITGQ 215


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 EVPLKTGQ 8
EVPL TGQ
Sbjct: 208 EVPLITGQ 215


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 2 VPLKTGQ 8
+PL+TGQ
Sbjct: 203 IPLRTGQ 209


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EVPLKTGQ 8
E+PL TGQ
Sbjct: 208 EIPLITGQ 215


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EVPLKTGQ 8
E+PL TGQ
Sbjct: 207 EIPLVTGQ 214


>sp|XACI_HALVD|XYLOSE/ARABINOSE import permease protein XacI|Haloferax volcanii (strain ATCC

Query: 2 VPLKTGQLT 10
VPL+TG +T
Sbjct: 39 VPLETGIMT 47


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VPLKTGQL 9
+P+KTG+L
Sbjct: 486 MPVKTGEL 493


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 EVPLKTGQL 9
+VPLK G L
Sbjct: 151 DVPLKAGNL 159


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 1 EVPLKTGQ 8
+VPL TGQ
Sbjct: 207 DVPLVTGQ 214




64|SequenceR|325|316|YRKRPEVPLK

>sp|FWDC_METWO|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 RKRPEVPLK 10
+++PEVPL+
Sbjct: 9 KEQPEVPLE 17


>sp|FWDC_METTM|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 RKRPEVPLK 10
+++PEVPL+
Sbjct: 9 KEQPEVPLE 17


>sp|FWDC_METTH|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 RKRPEVPLK 10
+++PEVPL+
Sbjct: 9 KEQPEVPLE 17


>sp|HEM3_NITMS|PROBABLE porphobilinogen deaminase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 RKRPEVPLK 10
RKRP+V +K
Sbjct: 134 RKRPDVTVK 142


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YRKRPEVPLK 10
+R +P++P++
Sbjct: 213 FRSKPQIPME 222


>sp|YHMF_METFE|UNCHARACTERIZED 32.2 kDa protein in|Methanothermus fervidus

Query: 1 YRKRPEVPL 9
YRK+ +VP+
Sbjct: 61 YRKKLDVPI 69


>sp|RNZ_METVS|RIBONUCLEASE Z|Methanococcus vannielii (strain ATCC 35089

Query: 1 YRKRPEVPLK 10
YR P V LK
Sbjct: 16 YRSHPSVALK 25


>sp|RL18A_HALLT|LARGE ribosomal subunit protein eL20|Halorubrum lacusprofundi (strain

Query: 2 RKRPEVPLK 10
RKRP++ +K
Sbjct: 45 RKRPQIEIK 53




65|SequenceR|330|321|HWVYVYRKRP

>sp|MTRD_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina acetivorans (strain

Query: 2 WVYVY 6
WVYVY
Sbjct: 97 WVYVY 101


>sp|Y863_ARCFU|UNCHARACTERIZED protein AF_0863|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WVYVYRKR 9
WV +YR+R
Sbjct: 280 WVELYRRR 287


>sp|MTRD_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 2 WVYVY 6
W+YVY
Sbjct: 97 WIYVY 101


>sp|IXTPA_METJA|DITP/XTP pyrophosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WVYVYRKRP 10
WVY K+P
Sbjct: 52 WVYNILKKP 60


>sp|Y1618_ARCFU|UNCHARACTERIZED protein AF_1618|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WVYVYRKRP 10
WVY +RP
Sbjct: 46 WVYWIERRP 54




66|SequenceR|335|326|PGQPCHWVYV

>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 4 PCHWVY 9
P HWVY
Sbjct: 749 PAHWVY 754


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PGQPCHWV 8
PG+P +W+
Sbjct: 156 PGKPIYWI 163


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGQPCHWV 8
PG+P +W+
Sbjct: 156 PGKPIYWM 163


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PGQPCHWV 8
PG+P +W+
Sbjct: 156 PGKPIYWM 163


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 QPCHWVY 9
+P HW+Y
Sbjct: 509 EPDHWIY 515


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGQPCH 6
PG+PC+
Sbjct: 60 PGEPCY 65


>sp|PURQ_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanocaldococcus jannaschii (strain ATCC

Query: 5 CHWVYV 10
C WVY+
Sbjct: 111 CKWVYI 116


>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGQPCHWVY 9
PG C W Y
Sbjct: 131 PGTDCPWWY 139


>sp|SURE_THEPD|5'-NUCLEOTIDASE SurE|Thermofilum pendens (strain DSM 2475

Query: 2 GQPCHWVY 9
G+P +W+Y
Sbjct: 201 GRPYYWLY 208


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 PGQPCHWVY 9
P Q HWV+
Sbjct: 309 PAQTLHWVF 317


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 PGQPCHWVYV 10
PG PC ++ +
Sbjct: 150 PGAPCFFIEI 159


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PGQPCHWV 8
PGQ +WV
Sbjct: 405 PGQKYYWV 412


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PGQPCHWV 8
PGQ +WV
Sbjct: 405 PGQKYYWV 412


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PGQPCHWV 8
PGQ +WV
Sbjct: 404 PGQKYYWV 411


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PGQPCHWV 8
PGQ +WV
Sbjct: 404 PGQKYYWV 411


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 1 PGQPC 5
PG+PC
Sbjct: 60 PGEPC 64


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGQPC 5
PG+PC
Sbjct: 60 PGEPC 64


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GQPCHW 7
G+P HW
Sbjct: 152 GRPLHW 157


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 PGQPC 5
PG+PC
Sbjct: 60 PGEPC 64


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PGQPCHWVYV 10
PG C W+ +
Sbjct: 248 PGARCGWIEI 257


>sp|Y828_PYRHO|PUTATIVE gamma-glutamylcyclotransferase PH0828|Pyrococcus horikoshii

Query: 2 GQPCHW 7
G+P HW
Sbjct: 19 GKPLHW 24


>sp|Y636_PYRAB|UPF0179 protein PYRAB06360|Pyrococcus abyssi (strain GE5 /

Query: 1 PGQPC 5
PG+PC
Sbjct: 22 PGEPC 26


>sp|Y1477_PYRHO|UPF0179 protein PH1477|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGQPC 5
PG+PC
Sbjct: 22 PGEPC 26


>sp|HMDY_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 1 PGQPCHWVYV 10
PG P H YV
Sbjct: 160 PGTPQHGHYV 169


>sp|RL1_STAMF|LARGE ribosomal subunit protein uL1|Staphylothermus marinus (strain ATCC

Query: 2 GQPCHWVYV 10
Q C WV V
Sbjct: 101 AQECDWVLV 109


>sp|MTRE_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 2 GQPCHW 7
GQP +W
Sbjct: 121 GQPVYW 126


>sp|PURQ_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus abyssi (strain GE5 /

Query: 5 CHWVYV 10
C W+Y+
Sbjct: 111 CKWIYL 116


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 3 QPCHWV 8
+PC W+
Sbjct: 849 EPCRWL 854


>sp|Y836_METJA|UNCHARACTERIZED protein MJ0836|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GQPCHWVY 9
GQ C W Y
Sbjct: 31 GQVCLWCY 38


>sp|PURQ_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanopyrus kandleri (strain AV19 /

Query: 5 CHWVYV 10
C WVY+
Sbjct: 112 CDWVYL 117


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGQPC 5
PG+PC
Sbjct: 286 PGEPC 290




67|SequenceR|340|331|PTELGPGQPC

>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 ELGPGQP 9
E+GPG P
Sbjct: 65 EVGPGDP 71


>sp|Y1477_PYRHO|UPF0179 protein PH1477|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GPGQPC 10
GPG+PC
Sbjct: 21 GPGEPC 26


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 4 LGPGQP 9
LGPG+P
Sbjct: 274 LGPGRP 279


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PTELGPGQPC 10
PT P +PC
Sbjct: 423 PTATQPPEPC 432


>sp|TRUD_HALMA|PROBABLE tRNA pseudouridine synthase D|Haloarcula marismortui (strain ATCC

Query: 2 TELGPGQP 9
TELG G+P
Sbjct: 379 TELGSGEP 386


>sp|Y636_PYRAB|UPF0179 protein PYRAB06360|Pyrococcus abyssi (strain GE5 /

Query: 5 GPGQPC 10
GPG+PC
Sbjct: 21 GPGEPC 26


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PTELGPGQPC 10
PT GPG C
Sbjct: 433 PTRDGPGITC 442


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC

Query: 4 LGPGQP 9
+GPGQP
Sbjct: 64 IGPGQP 69


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 4 LGPGQP 9
+GPGQP
Sbjct: 64 IGPGQP 69


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 6 PGQPC 10
PG+PC
Sbjct: 60 PGEPC 64


>sp|METXA_HALSA|HOMOSERINE O-acetyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PTELGPGQP 9
P +GPG+P
Sbjct: 61 PDIVGPGRP 69


>sp|MCT_HALMA|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PTELGPG 7
PT++GPG
Sbjct: 166 PTKVGPG 172


>sp|MCT_HALHT|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula hispanica (strain ATCC 33960

Query: 1 PTELGPG 7
PT++GPG
Sbjct: 166 PTKVGPG 172


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 PGQPC 10
PG+PC
Sbjct: 60 PGEPC 64


>sp|HEM3_PYRAR|PROBABLE porphobilinogen deaminase|Pyrobaculum arsenaticum (strain DSM

Query: 1 PTELGPG 7
P+EL PG
Sbjct: 83 PSELSPG 89


>sp|PMDHS_AERPE|PHOSPHOMEVALONATE dehydratase small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 4 LGPGQP 9
LGPGQP
Sbjct: 127 LGPGQP 132


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 2 TELGPGQP 9
++L PGQP
Sbjct: 248 SDLPPGQP 255


>sp|EF1A_PYRIL|ELONGATION factor 1-alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PTELGPG 7
PT +GPG
Sbjct: 345 PTAIGPG 351


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 6 PGQPC 10
PG+PC
Sbjct: 60 PGEPC 64


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 6 PGQPC 10
PG+PC
Sbjct: 60 PGEPC 64


>sp|PTH_PYRAE|PEPTIDYL-TRNA hydrolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TELGPGQP 9
TEL PG P
Sbjct: 89 TELPPGTP 96


>sp|EF1A_PYRAE|ELONGATION factor 1-alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PTELGPG 7
PT +GPG
Sbjct: 345 PTAIGPG 351


>sp|Y1381_PYRFU|UPF0179 protein PF1381|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GPGQPC 10
GP +PC
Sbjct: 21 GPAEPC 26


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PTELGPG 7
PT +GPG
Sbjct: 345 PTAIGPG 351




68|SequenceR|345|336|TDAVLPTELG

>sp|RIBA_THEVO|GTP cyclohydrolase-2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TDAVLPTELG 10
++A LPTE G
Sbjct: 6 SNAKLPTEFG 15


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 2 DAVLPTEL 9
DAVLP EL
Sbjct: 244 DAVLPEEL 251


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 TDAVLPTELG 10
TD LP+ +G
Sbjct: 347 TDGALPSNVG 356


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TDAVLPTELG 10
T ++PT+LG
Sbjct: 1172 TKKLIPTQLG 1181


>sp|Y688_PYRIL|UPF0179 protein Pisl_0688|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DAVLPTELG 10
+A LP+ELG
Sbjct: 140 EAPLPSELG 148


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 2 DAVLPTELG 10
DA++PT G
Sbjct: 483 DALIPTSFG 491


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 AVLPTELG 10
AVLP E+G
Sbjct: 262 AVLPAEVG 269


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 AVLPTELG 10
AVLP E+G
Sbjct: 262 AVLPAEVG 269


>sp|PURA_NATPD|ADENYLOSUCCINATE synthetase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 LPTELG 10
LPTELG
Sbjct: 288 LPTELG 293


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 5 LPTELG 10
LPTELG
Sbjct: 288 LPTELG 293




69|SequenceR|350|341|FYAGSTDAVL

>sp|MRE11_METMP|DNA double-strand break repair protein|Methanococcus maripaludis

Query: 2 YAGSTD 7
YAGSTD
Sbjct: 208 YAGSTD 213


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 1 FYAGSTDA 8
FYA S+DA
Sbjct: 8 FYAKSSDA 15


>sp|GSA_AERPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Aeropyrum pernix (strain ATCC 700893

Query: 2 YAGSTDAVL 10
Y GS DAVL
Sbjct: 143 YHGSHDAVL 151


>sp|ALF1_HALSA|FRUCTOSE-BISPHOSPHATE aldolase class 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 YAGSTDAV 9
Y GSTDA+
Sbjct: 180 YPGSTDAM 187


>sp|ALF1_HALS3|FRUCTOSE-BISPHOSPHATE aldolase class 1|Halobacterium salinarum (strain ATCC 29341

Query: 2 YAGSTDAV 9
Y GSTDA+
Sbjct: 180 YPGSTDAM 187


>sp|AATE_METBF|A-TYPE ATP synthase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 2 YAGSTDAV 9
YAG+ DA+
Sbjct: 137 YAGNLDAI 144


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 AGSTDAVL 10
AGST+A+L
Sbjct: 270 AGSTNAIL 277


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 AGSTDAVL 10
AGST+A+L
Sbjct: 270 AGSTNAIL 277


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 AGSTDAVL 10
AGST+A+L
Sbjct: 270 AGSTNAIL 277


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 AGSTDAVL 10
AGST+A+L
Sbjct: 270 AGSTNAIL 277


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 AGSTDAVL 10
AGST+A+L
Sbjct: 270 AGSTNAIL 277




70|SequenceR|355|346|LGERRFYAGS

>sp|Y692_ARCFU|UNCHARACTERIZED protein AF_0692|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GERRFYAG 9
GERRF+A
Sbjct: 260 GERRFFAA 267


>sp|RIFK_METM7|RIBOFLAVIN kinase|Methanococcus maripaludis (strain C7 /

Query: 1 LGERRFYAG 9
LGE RF+ G
Sbjct: 11 LGEGRFFVG 19


>sp|RIFK_METM5|RIBOFLAVIN kinase|Methanococcus maripaludis (strain C5 /

Query: 1 LGERRFYAG 9
LGE RF+ G
Sbjct: 11 LGEGRFFVG 19


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4

Query: 1 LGERRFY 7
LGER FY
Sbjct: 31 LGERDFY 37


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGERRFYAGS 10
+GE +FY G+
Sbjct: 227 VGETKFYLGA 236


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain

Query: 1 LGERRFY 7
LGER FY
Sbjct: 31 LGERDFY 37


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain

Query: 1 LGERRFY 7
LGER FY
Sbjct: 31 LGERDFY 37


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25

Query: 1 LGERRFY 7
LGER FY
Sbjct: 31 LGERDFY 37


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 LGERRFY 7
LGER FY
Sbjct: 31 LGERDFY 37


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain

Query: 1 LGERRFY 7
LGER FY
Sbjct: 31 LGERDFY 37


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain

Query: 1 LGERRFY 7
LGER FY
Sbjct: 31 LGERDFY 37


>sp|CAS5_ARCFU|CRISPR-ASSOCIATED protein Cas5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GERRFYA 8
GER FYA
Sbjct: 55 GERVFYA 61


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LGERRFY 7
LGER FY
Sbjct: 32 LGERYFY 38


>sp|OTC_AERPE|ORNITHINE carbamoyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 ERRFYAG 9
+RR+YAG
Sbjct: 33 KRRYYAG 39


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 LGERRFY 7
LGER FY
Sbjct: 31 LGERDFY 37


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 LGERRFY 7
LGER FY
Sbjct: 31 LGERDFY 37


>sp|RIFK_METMP|RIBOFLAVIN kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LGERRFYAG 9
LGE +F+ G
Sbjct: 11 LGEGKFFVG 19


>sp|BACS2_NATPH|SENSORY rhodopsin-2|Natronomonas pharaonis (Natronobacterium pharaonis)

Query: 2 GERRFY 7
GERR+Y
Sbjct: 32 GERRYY 37


>sp|RL24_IGNH4|LARGE ribosomal subunit protein uL24|Ignicoccus hospitalis (strain

Query: 2 GERRFY 7
GE+RFY
Sbjct: 89 GEQRFY 94


>sp|MCRG_METTE|METHYL-COENZYME M reductase subunit gamma|Methanosarcina thermophila

Query: 3 ERRFYAGS 10
ER+FY G+
Sbjct: 3 ERQFYPGA 10




71|SequenceR|360|351|LYNSGLGERR

>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LYNSGLGERR 10
LY+ G GE+R
Sbjct: 4 LYDLGTGEKR 13


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 1 LYNSGLGERR 10
L+N G G+RR
Sbjct: 115 LFNGGGGQRR 124


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 1 LYNSGLGE 8
L NSG+GE
Sbjct: 350 LMNSGIGE 357


>sp|RL22_HALSA|LARGE ribosomal subunit protein uL22|Halobacterium salinarum (strain

Query: 2 YNSGLGER 9
+NSG+G R
Sbjct: 63 HNSGVGHR 70


>sp|CAS6_HALVD|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax volcanii (strain ATCC 29605

Query: 3 NSGLGERR 10
+SG+G+RR
Sbjct: 246 DSGIGQRR 253


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYNSGLGER 9
LYN G+G R
Sbjct: 996 LYNFGVGGR 1004


>sp|RL22_HALWD|LARGE ribosomal subunit protein uL22|Haloquadratum walsbyi (strain DSM

Query: 2 YNSGLGER 9
+NSG+G R
Sbjct: 63 HNSGVGHR 70


>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YNSGLGERR 10
+N GLG+ R
Sbjct: 29 HNEGLGDTR 37


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 2 YNSGLGERR 10
+N GLG+ R
Sbjct: 29 HNEGLGDTR 37


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 2 YNSGLGERR 10
+N GLG+ R
Sbjct: 29 HNEGLGDTR 37




72|SequenceR|365|356|PSRGGLYNSG

>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 2 SRGGLYN 8
SRGG+YN
Sbjct: 245 SRGGIYN 251


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 2 SRGGLYNSG 10
SRGG Y++G
Sbjct: 240 SRGGSYDTG 248


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SRGGLYNSG 10
SRGG Y++G
Sbjct: 240 SRGGSYDTG 248


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 2 SRGGLYNSG 10
++G LYN+G
Sbjct: 337 AKGALYNTG 345


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SRGGLYNS 9
S+G LYNS
Sbjct: 337 SKGALYNS 344


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 2 SRGGLYNSG 10
++G LYN+G
Sbjct: 338 AKGALYNNG 346


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SRGGLYN 8
S+GG+YN
Sbjct: 246 SKGGIYN 252


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SRGGLYN 8
S+GG+YN
Sbjct: 246 SKGGIYN 252


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 2 SRGGLYN 8
S+GG+YN
Sbjct: 246 SKGGIYN 252


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 2 SRGGLYN 8
S+GG+YN
Sbjct: 246 SKGGIYN 252


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 2 SRGGLYN 8
S+GG+YN
Sbjct: 245 SKGGIYN 251


>sp|HIS6_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii (strain

Query: 2 SRGGLYNSG 10
+R G YN+G
Sbjct: 142 TRSGTYNTG 150


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 2 SRGGLYN 8
S+GG+YN
Sbjct: 246 SKGGIYN 252


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SRGGLYN 8
S+GG+YN
Sbjct: 246 SKGGIYN 252


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 SRGGLYNSG 10
S+GG Y++G
Sbjct: 240 SKGGSYDTG 248


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 1 PSRGGLY 7
P RGGLY
Sbjct: 315 PRRGGLY 321


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SRGGLYNSG 10
S+GG Y++G
Sbjct: 236 SKGGSYDTG 244


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SRGGLYN 8
SRGG+Y+
Sbjct: 242 SRGGIYD 248


>sp|HIS6_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 2 SRGGLYNSG 10
+R G YN+G
Sbjct: 142 TRSGKYNTG 150


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 SRGGLYNSG 10
S GGL N+G
Sbjct: 576 SGGGLLNTG 584


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 GGLYNSG 10
GG+YN+G
Sbjct: 285 GGVYNAG 291




73|SequenceR|370|361|EEQETPSRGG

>sp|CDC6G_HALMA|ORC1-TYPE DNA replication protein 7|Haloarcula marismortui (strain ATCC 43049

Query: 2 EQETPSR 8
EQETP+R
Sbjct: 312 EQETPAR 318


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 1 EEQETPSRGG 10
E+Q TP R G
Sbjct: 127 EDQTTPKRCG 136


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 EEQETPSR 8
EE+E PSR
Sbjct: 458 EEEEKPSR 465


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 2 EQETPSRGG 10
++E P RGG
Sbjct: 269 KEEVPGRGG 277


>sp|KAE1_METTP|TRNA N6-adenosine threonylcarbamoyltransferase|Methanothrix

Query: 5 TPSRGG 10
TP+RGG
Sbjct: 32 TPARGG 37


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EQETPSRGG 10
++E P RGG
Sbjct: 269 KEEVPGRGG 277




74|SequenceR|375|366|NAPDPEEQET

>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 2 APDPEE 7
APDPE+
Sbjct: 16 APDPEK 21


>sp|ADHS2_ARCFU|PUTATIVE 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase

Query: 2 APDPEEQ 8
APDP E+
Sbjct: 87 APDPNEK 93


>sp|PYRF_PYRHO|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC

Query: 1 NAPDPEE 7
NAP+P E
Sbjct: 190 NAPNPRE 196


>sp|PYRB_METBF|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina barkeri

Query: 3 PDPEEQE 9
PDPEE E
Sbjct: 235 PDPEEYE 241


>sp|AATI_METTH|A-TYPE ATP synthase subunit I|Methanothermobacter thermautotrophicus

Query: 3 PDPEE 7
PDPEE
Sbjct: 344 PDPEE 348


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 3 PDPEEQET 10
PDP E E+
Sbjct: 236 PDPREYES 243


>sp|PYRB_METTH|ASPARTATE carbamoyltransferase catalytic subunit|Methanothermobacter

Query: 3 PDPEE 7
PDPEE
Sbjct: 233 PDPEE 237


>sp|PYRB_METAC|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina acetivorans

Query: 3 PDPEEQE 9
PDPEE E
Sbjct: 235 PDPEEYE 241


>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PDPEEQE 9
PDP E+E
Sbjct: 297 PDPRERE 303


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 3 PDPEEQE 9
PDPE+ E
Sbjct: 243 PDPEKAE 249


>sp|CETZ_PYRHO|TUBULIN-LIKE protein CetZ|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PDPEEQE 9
PDP E+E
Sbjct: 297 PDPRERE 303


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 3 PDPEEQE 9
PDPEE E
Sbjct: 236 PDPEEFE 242


>sp|T1SH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 3 PDPEEQE 9
P PEEQ+
Sbjct: 171 PSPEEQQ 177


>sp|PYRB_METMA|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina mazei (strain

Query: 3 PDPEEQE 9
PDP+E E
Sbjct: 236 PDPQEYE 242


>sp|DAPA_NATPD|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NAPDPEEQET 10
N P+PE ET
Sbjct: 111 NIPEPEGMET 120




75|SequenceR|380|371|HDVELNAPDP

>sp|FLAB4_NATMM|FLAGELLIN B4|Natrialba magadii (strain ATCC 43099

Query: 2 DVELNAPD 9
+VELNAPD
Sbjct: 243 EVELNAPD 250


>sp|CHEC1_HALS3|PUTATIVE CheY-P phosphatase CheC1|Halobacterium salinarum (strain ATCC 29341

Query: 2 DVELNAPD 9
D EL+APD
Sbjct: 165 DAELHAPD 172


>sp|FLAB2_NATMM|FLAGELLIN B2|Natrialba magadii (strain ATCC 43099

Query: 3 VELNAPD 9
VELN+PD
Sbjct: 242 VELNSPD 248


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 DVELNAPDP 10
+VEL PDP
Sbjct: 242 EVELVTPDP 250


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 2 DVELNAPD 9
DVE++ PD
Sbjct: 300 DVEISKPD 307


>sp|DCDB_METKA|DCTP deaminase, dUMP-forming|Methanopyrus kandleri (strain AV19 /

Query: 3 VELNAPD 9
+E+NAPD
Sbjct: 93 IEINAPD 99


>sp|GLNA_METTH|GLUTAMINE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 VELNAPDP 10
VEL PDP
Sbjct: 331 VELRMPDP 338


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VELNAPDP 10
+EL PDP
Sbjct: 335 IELRCPDP 342


>sp|Y614A_NATPD|UNCHARACTERIZED protein NP_0614A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DVELNAPD 9
D+ LNAPD
Sbjct: 52 DIYLNAPD 59


>sp|RL18_HALMA|LARGE ribosomal subunit protein uL18|Haloarcula marismortui (strain ATCC

Query: 2 DVELNAPDP 10
D+ LN+P P
Sbjct: 104 DIGLNSPTP 112




76|SequenceR|385|376|DQFFDHDVEL

>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 2 QFFDHDVE 9
+F DHDVE
Sbjct: 173 EFVDHDVE 180


>sp|MNTP_METBF|MANGANESE exporter MntP|Methanosarcina barkeri (strain Fusaro /

Query: 2 QFFDHDVE 9
FF+H+VE
Sbjct: 157 HFFEHEVE 164


>sp|MNTP_METAC|MANGANESE exporter MntP|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QFFDHDVE 9
FF+H+VE
Sbjct: 157 HFFEHEVE 164


>sp|TRPF_THEVO|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 FDHDVEL 10
FDHD EL
Sbjct: 76 FDHDPEL 82


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DQFFDHDVEL 10
++FF+H VE+
Sbjct: 391 ERFFEHAVEM 400


>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QFFDHDVEL 10
+F D DVEL
Sbjct: 254 EFLDDDVEL 262


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 QFFDHDV 8
QFFDH++
Sbjct: 326 QFFDHEL 332


>sp|AROK_METTP|SHIKIMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DQFFDHDVEL 10
+QFF DV++
Sbjct: 170 EQFFSRDVDV 179


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella arvoryzae

Query: 1 DQFFDHDVEL 10
++F D DVE+
Sbjct: 197 EEFIDFDVEI 206


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 FDHDVE 9
FDH+VE
Sbjct: 416 FDHEVE 421


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 3 FFDHDVE 9
FF HD E
Sbjct: 990 FFTHDTE 996


>sp|Y3024_HALLT|UNCHARACTERIZED protein Hlac_3024|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DQFFDHDVEL 10
D F HDV+L
Sbjct: 157 DAFSTHDVDL 166


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 3 FFDHDV 8
+FDHD+
Sbjct: 262 YFDHDL 267


>sp|DGGGP_METTH|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 DQFFDHDVE 9
+ +FDH+++
Sbjct: 52 NDYFDHEID 60


>sp|FEN_NATPD|FLAP endonuclease 1|Natronomonas pharaonis (strain ATCC 35678

Query: 2 QFFDHDV 8
+FF+HDV
Sbjct: 69 KFFEHDV 75


>sp|TFS4_SACS2|TRANSCRIPTION factor S4|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FFDHDVE 9
+ DHDVE
Sbjct: 25 YSDHDVE 31


>sp|HEM1_METBU|GLUTAMYL-TRNA reductase|Methanococcoides burtonii (strain DSM 6242

Query: 2 QFFDHDVEL 10
+F+DHD L
Sbjct: 80 EFYDHDESL 88


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 2 QFFDHDVEL 10
Q +D+D+E+
Sbjct: 611 QAYDYDIEI 619




77|SequenceR|390|381|HPWVKDQFFD

>sp|RS4_IGNH4|SMALL ribosomal subunit protein uS4|Ignicoccus hospitalis (strain

Query: 1 HPWVKDQFFD 10
HPWVK++ +
Sbjct: 16 HPWVKERLIE 25


>sp|MBD_PICTO|MEVALONATE 3,5-bisphosphate decarboxylase|Picrophilus torridus (strain ATCC

Query: 3 WVKDQFFD 10
WVK +FFD
Sbjct: 239 WVKSKFFD 246


>sp|RS4_THEVO|SMALL ribosomal subunit protein uS4|Thermoplasma volcanium (strain ATCC

Query: 1 HPWVKDQ 7
HPW KD+
Sbjct: 16 HPWEKDR 22


>sp|RS4_PICTO|SMALL ribosomal subunit protein uS4|Picrophilus torridus (strain ATCC

Query: 1 HPWVKDQ 7
HPW KD+
Sbjct: 16 HPWEKDR 22


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HPWVKDQFFD 10
+PW FFD
Sbjct: 3 NPWSSSDFFD 12


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 3 WVKDQFFD 10
WV +QF D
Sbjct: 328 WVTEQFLD 335


>sp|RTCA_METBF|RNA 3'-terminal phosphate cyclase|Methanosarcina barkeri (strain Fusaro

Query: 3 WVKDQFFD 10
WV +QF D
Sbjct: 307 WVTEQFLD 314


>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 3 WVKDQFFD 10
WV +QF D
Sbjct: 331 WVTEQFLD 338


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 PWVKDQ 7
PW+KD+
Sbjct: 323 PWIKDE 328


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HPWVKDQFFD 10
+PW FFD
Sbjct: 3 NPWSSSDFFD 12


>sp|MVK_ARCFU|MEVALONATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HPWVKDQFFD 10
HP V D+ FD
Sbjct: 185 HPEVVDKIFD 194


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 WVKDQFFD 10
WVKD + D
Sbjct: 338 WVKDDYLD 345


>sp|VAPC1_THEAC|RIBONUCLEASE VapC1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PWVKDQF 8
PWV QF
Sbjct: 2 PWVGSQF 8


>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 3 WVKDQFF 9
WV +QFF
Sbjct: 320 WVVEQFF 326


>sp|RTCA_PYRFU|RNA 3'-terminal phosphate cyclase|Pyrococcus furiosus (strain ATCC

Query: 3 WVKDQFF 9
WV +QFF
Sbjct: 313 WVVEQFF 319


>sp|Y2365_ARCFU|IRON-SULFUR cluster assembly SufBD family|Archaeoglobus fulgidus (strain ATCC

Query: 1 HPWVKDQFF 9
+ WVKD F+
Sbjct: 64 YDWVKDYFW 72


>sp|MTNA_PYRFU|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus furiosus

Query: 5 KDQFFD 10
KD+FFD
Sbjct: 82 KDEFFD 87


>sp|DNAG_METB6|DNA primase DnaG|Methanoregula boonei (strain DSM 21154

Query: 3 WVKDQFFD 10
+V+DQ+F+
Sbjct: 269 YVRDQYFE 276


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 WVKDQF 8
W+KD F
Sbjct: 324 WIKDNF 329


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 2 PWVKDQ 7
PW++D+
Sbjct: 289 PWIRDR 294


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 2 PWVKDQ 7
PW++D+
Sbjct: 289 PWIRDR 294


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 PWVKDQFF 9
PW KD+++
Sbjct: 658 PWKKDKWW 665


>sp|JAMM1_HALVD|DESAMPYLASE volcanii (strain ATCC 29605

Query: 1 HPWVKDQF 8
H W D+F
Sbjct: 124 HEWTGDEF 131


>sp|HTPX2_SACS2|PROTEASE HtpX homolog 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PWVKDQFFD 10
PW D F D
Sbjct: 300 PWYADIFMD 308


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HPWVKDQF 8
HP +DQF
Sbjct: 514 HPTFEDQF 521


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HPWVKD 6
PW+KD
Sbjct: 450 QPWLKD 455




78|SequenceR|395|386|VRLALHPWVK

>sp|Y611_ARCFU|UNCHARACTERIZED protein AF_0611|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LALHPWVK 10
L HPWVK
Sbjct: 19 LDFHPWVK 26


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 5 LHPWV 9
LHPWV
Sbjct: 18 LHPWV 22


>sp|DHAS_ARCFU|ASPARTATE-SEMIALDEHYDE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LALHPWVK 10
LA HPW K
Sbjct: 22 LAEHPWFK 29


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 LHPWVK 10
+HPWV+
Sbjct: 246 VHPWVR 251


>sp|RS4_METJA|SMALL ribosomal subunit protein uS4|Methanocaldococcus jannaschii

Query: 6 HPWVK 10
HPW+K
Sbjct: 17 HPWIK 21


>sp|RS4_SACS2|SMALL ribosomal subunit protein uS4|Saccharolobus solfataricus (strain

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|RS4_SULAC|SMALL ribosomal subunit protein uS4|Sulfolobus acidocaldarius (strain

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|RS4_SACI7|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|RS4_SACI6|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|RS4_SACI4|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|RS4_SACI3|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|RS4_SACI2|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|RS4_SACI1|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|RS4_THESM|SMALL ribosomal subunit protein uS4|Thermococcus sibiricus (strain DSM

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RLALHPWVK 10
RLAL W+K
Sbjct: 709 RLALWKWLK 717


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 4 ALHPW 8
+LHPW
Sbjct: 54 SLHPW 58


>sp|RS4_PYRFU|SMALL ribosomal subunit protein uS4|Pyrococcus furiosus (strain ATCC

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|RS4_PYRAB|SMALL ribosomal subunit protein uS4|Pyrococcus abyssi (strain GE5 /

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 3 LALHPWV 9
+ +HPW+
Sbjct: 1 MEMHPWL 7


>sp|G3PP_METJA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VRLALHPW 8
+RL +HP+
Sbjct: 129 IRLGIHPF 136


>sp|RS4_IGNH4|SMALL ribosomal subunit protein uS4|Ignicoccus hospitalis (strain

Query: 6 HPWVK 10
HPWVK
Sbjct: 16 HPWVK 20


>sp|RS4_PYRHO|SMALL ribosomal subunit protein uS4|Pyrococcus horikoshii (strain ATCC

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|COST_HALSA|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 700922

Query: 6 HPWV 9
HPWV
Sbjct: 166 HPWV 169


>sp|COST_HALS3|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 29341

Query: 6 HPWV 9
HPWV
Sbjct: 166 HPWV 169


>sp|RNH2_METVS|RIBONUCLEASE HII|Methanococcus vannielii (strain ATCC 35089

Query: 5 LHPWVK 10
LH WVK
Sbjct: 239 LHKWVK 244


>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VRLALHPW 8
VRL L PW
Sbjct: 53 VRLDLPPW 60


>sp|RS4_THEON|SMALL ribosomal subunit protein uS4|Thermococcus onnurineus (strain

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|RS4_THEKO|SMALL ribosomal subunit protein uS4|Thermococcus kodakarensis (strain

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|RS4_THEGJ|SMALL ribosomal subunit protein uS4|Thermococcus gammatolerans (strain

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 VRLALHPWV 9
VR+A HP V
Sbjct: 560 VRIATHPSV 568


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|RS4_HYPBU|SMALL ribosomal subunit protein uS4|Hyperthermus butylicus (strain DSM

Query: 6 HPWVK 10
HPW+K
Sbjct: 16 HPWIK 20


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 5 LHPWVK 10
+HPW K
Sbjct: 576 MHPWEK 581


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VRLALHPW 8
+RL L PW
Sbjct: 53 IRLDLPPW 60


>sp|RS4_SULTO|SMALL ribosomal subunit protein uS4|Sulfurisphaera tokodaii (strain DSM

Query: 6 HPWVK 10
HPW++
Sbjct: 16 HPWIR 20




79|SequenceR|400|391|TEFAPVRLAL

>sp|RNH2_SULTO|RIBONUCLEASE HII|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EFAPVRLAL 10
EF P+R+++
Sbjct: 95 EFKPIRISI 103


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EFAPVRLAL 10
EFAPV +L
Sbjct: 390 EFAPVHTSL 398


>sp|ARAT1_THELN|AROMATIC-AMINO-ACID aminotransferase 1|Thermococcus litoralis (strain ATCC 51850

Query: 3 FAPVRLAL 10
F P+RLAL
Sbjct: 88 FTPLRLAL 95




80|SequenceR|405|396|SQVKLTEFAP

>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 QVKLTEFAP 10
Q+KL E AP
Sbjct: 63 QIKLNEIAP 71


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 SQVKLTEFAP 10
+Q LTEFAP
Sbjct: 96 NQEVLTEFAP 105


>sp|TATC_METAR|SEC-INDEPENDENT protein translocase protein TatC|Methanocella arvoryzae (strain

Query: 1 SQVKLTEFAP 10
S VK+T +AP
Sbjct: 59 SYVKITTYAP 68




81|SequenceR|410|401|YGAWASQVKL

>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 2 GAWASQVK 9
G WA Q+K
Sbjct: 193 GGWAPQIK 200


>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YGAWASQ 7
YGAW +Q
Sbjct: 409 YGAWIAQ 415


>sp|GCSH_PYRAB|PROBABLE glycine cleavage system H|Pyrococcus abyssi (strain GE5 /

Query: 1 YGAWASQVK 9
YGAW +++K
Sbjct: 102 YGAWIAKIK 110


>sp|GCSH_PYRHO|PROBABLE glycine cleavage system H|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YGAWASQVK 9
YGAW +++K
Sbjct: 102 YGAWIAKIK 110


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 2 GAWASQ 7
G WASQ
Sbjct: 144 GGWASQ 149


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGAWASQV 8
YG WA ++
Sbjct: 343 YGKWAERI 350


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGAWASQVKL 10
YG + S VKL
Sbjct: 263 YGTYCSNVKL 272


>sp|RS24_SACS2|SMALL ribosomal subunit protein eS24|Saccharolobus solfataricus (strain

Query: 1 YGAWASQVKL 10
YGA S VKL
Sbjct: 72 YGAGISNVKL 81


>sp|RS24_SACI6|SMALL ribosomal subunit protein eS24|Saccharolobus islandicus (strain

Query: 1 YGAWASQVKL 10
YGA S VKL
Sbjct: 72 YGAGISNVKL 81


>sp|RS24_SACI4|SMALL ribosomal subunit protein eS24|Saccharolobus islandicus (strain

Query: 1 YGAWASQVKL 10
YGA S VKL
Sbjct: 72 YGAGISNVKL 81


>sp|RS24_SACI3|SMALL ribosomal subunit protein eS24|Saccharolobus islandicus (strain

Query: 1 YGAWASQVKL 10
YGA S VKL
Sbjct: 72 YGAGISNVKL 81


>sp|MBD_THEAC|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma acidophilum (strain

Query: 1 YGAWASQ 7
YG W S+
Sbjct: 269 YGTWVSE 275


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GAWASQVKL 10
G W QVKL
Sbjct: 57 GPWGYQVKL 65


>sp|RS24_SACI7|SMALL ribosomal subunit protein eS24|Saccharolobus islandicus (strain

Query: 1 YGAWASQVKL 10
YGA S +KL
Sbjct: 72 YGAGISNIKL 81


>sp|RS24_SACI2|SMALL ribosomal subunit protein eS24|Saccharolobus islandicus (strain

Query: 1 YGAWASQVKL 10
YGA S +KL
Sbjct: 72 YGAGISNIKL 81


>sp|RS24_SACI1|SMALL ribosomal subunit protein eS24|Saccharolobus islandicus (strain

Query: 1 YGAWASQVKL 10
YGA S +KL
Sbjct: 72 YGAGISNIKL 81


>sp|PGP_STAMF|PHOSPHOGLYCOLATE phosphatase|Staphylothermus marinus (strain ATCC 43588

Query: 1 YGAWASQVKL 10
YG+W + +L
Sbjct: 103 YGSWQNMFRL 112




82|SequenceR|415|406|TNYDYYGAWA

>sp|FTR_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TNYDYYGAW 9
T YDYY AW
Sbjct: 26 TGYDYYWAW 34


>sp|THIE_THEVO|THIAMINE-PHOSPHATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 YDYYGA 8
YDYYGA
Sbjct: 14 YDYYGA 19


>sp|PANB_AERPE|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TNYDYYGAW 9
T YDY AW
Sbjct: 24 TAYDYPTAW 32


>sp|RNP2_METJA|RIBONUCLEASE P protein component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DYYGAWA 10
+YYG+W
Sbjct: 44 EYYGSWG 50


>sp|TYSY_METTM|PUTATIVE thymidylate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 2 NYDYYGAW 9
++D YGAW
Sbjct: 167 SHDIYGAW 174


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YDYYGAW 9
Y+Y GAW
Sbjct: 347 YNYEGAW 353


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NYDYYGAWA 10
N+ YG WA
Sbjct: 339 NHPVYGKWA 347


>sp|ENO_PYRAE|ENOLASE aerophilum (strain ATCC 51768

Query: 4 DYYGAWA 10
DY G WA
Sbjct: 405 DYLGKWA 411


>sp|TYSY_METTH|PUTATIVE thymidylate synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 NYDYYGAW 9
++D YGAW
Sbjct: 167 SHDIYGAW 174


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TNYDYYG 7
+N DYYG
Sbjct: 101 SNKDYYG 107


>sp|TF2B2_THEVO|TRANSCRIPTION initiation factor IIB 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TNYDYYG 7
+N DYYG
Sbjct: 88 SNKDYYG 94


>sp|TF2B2_THEAC|TRANSCRIPTION initiation factor IIB 2|Thermoplasma acidophilum (strain ATCC

Query: 1 TNYDYYG 7
+N DYYG
Sbjct: 82 SNKDYYG 88


>sp|RNP2_META3|RIBONUCLEASE P protein component 2|Methanococcus aeolicus (strain ATCC

Query: 4 DYYGAWA 10
+YYG W
Sbjct: 41 NYYGVWG 47


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 1 TNYDY 5
TNYDY
Sbjct: 124 TNYDY 128


>sp|Y1078_METJA|UPF0104 membrane protein MJ1078|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NYDYYGAWA 10
N DY GA+A
Sbjct: 189 NIDYSGAFA 197


>sp|AROC_METVS|CHORISMATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 NYDYYGA 8
NYDY G
Sbjct: 116 NYDYRGG 122


>sp|AROC_METM7|CHORISMATE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 NYDYYGA 8
NYDY G
Sbjct: 115 NYDYRGG 121


>sp|AROC_METM5|CHORISMATE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 NYDYYGA 8
NYDY G
Sbjct: 115 NYDYRGG 121


>sp|AROC_METJA|CHORISMATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NYDYYGA 8
NYDY G
Sbjct: 119 NYDYRGG 125


>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 NYDYYGA 8
NYDY G
Sbjct: 115 NYDYRGG 121


>sp|AROC_METMP|CHORISMATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NYDYYGA 8
NYDY G
Sbjct: 115 NYDYRGG 121


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 YDYYGAW 9
YDY AW
Sbjct: 69 YDYAQAW 75


>sp|CBID_METMJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 1 TNYDYYGAW 9
T+++Y AW
Sbjct: 6 TDFEYPAAW 14


>sp|AROE_THEAC|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NYDYYG 7
N DYYG
Sbjct: 100 NTDYYG 105


>sp|COFC_METPS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella paludicola (strain DSM 17711

Query: 4 DYYGA 8
DYYGA
Sbjct: 132 DYYGA 136


>sp|COFC_METMJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 DYYGA 8
DYYGA
Sbjct: 135 DYYGA 139


>sp|COFC_METAR|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 4 DYYGA 8
DYYGA
Sbjct: 133 DYYGA 137


>sp|RMLC_METTH|DTDP-4-DEHYDRORHAMNOSE 3,5-epimerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 NYDYYGAW 9
N D YG W
Sbjct: 92 NSDTYGEW 99


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 NYDYYGA 8
NYDY G
Sbjct: 116 NYDYNGG 122


>sp|SYFA_PYRAE|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 DYYGAWA 10
+YY WA
Sbjct: 468 EYYARWA 474


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 YYGAW 9
YYG W
Sbjct: 297 YYGLW 301


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 1 TNYDYYGAW 9
T +Y GAW
Sbjct: 326 TGGEYAGAW 334


>sp|SECG_ARCFU|PREPROTEIN translocase subunit SecG|Archaeoglobus fulgidus (strain ATCC

Query: 5 YYGAW 9
YYG W
Sbjct: 55 YYGLW 59


>sp|CDC61_HALSA|ORC1-TYPE DNA replication protein 1|Halobacterium salinarum (strain ATCC

Query: 2 NYDYYGAW 9
NY Y W
Sbjct: 72 NYQYVNCW 79




83|SequenceR|420|411|GNQDFTNYDY

>sp|PPAC_METJA|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanocaldococcus jannaschii (strain

Query: 2 NQDFTNYDY 10
N DF N+D+
Sbjct: 200 NMDFKNFDF 208


>sp|MRE11_PYRFU|DNA double-strand break repair protein|Pyrococcus furiosus (strain ATCC

Query: 1 GNQDFTNYDY 10
G +DF ++DY
Sbjct: 363 GEKDFDDFDY 372


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 3 QDFTNYDY 10
++F N+DY
Sbjct: 193 EEFVNFDY 200


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNQDFTNYDY 10
GN+ NYDY
Sbjct: 97 GNEFEMNYDY 106


>sp|GGR1_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GNQDFTNYDY 10
GN D T Y+Y
Sbjct: 225 GNTDKTAYEY 234


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 3 QDFTNYDY 10
++F N+DY
Sbjct: 194 EEFINFDY 201


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 3 QDFTNYDY 10
++F N+DY
Sbjct: 196 EEFINFDY 203


>sp|TRUA_METAR|TRNA pseudouridine synthase A|Methanocella arvoryzae (strain DSM 22066

Query: 1 GNQDFTNY 8
G DFTN+
Sbjct: 132 GTHDFTNF 139


>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 FTNYDY 10
F NYDY
Sbjct: 122 FRNYDY 127


>sp|UGNO_METMP|UDP-N-ACETYLGLUCOSAMINE 3-dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NQDFTNYD 9
NQD T YD
Sbjct: 248 NQDLTLYD 255


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 2 NQDFTNY 8
N DF NY
Sbjct: 112 NHDFQNY 118


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 5 FTNYDY 10
F NYDY
Sbjct: 220 FLNYDY 225


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 GNQDFTNYDY 10
GNQ + Y Y
Sbjct: 229 GNQKYKPYSY 238


>sp|TRUA_NANEQ|TRNA pseudouridine synthase A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GNQDFTNY 8
G +DFTN+
Sbjct: 115 GKKDFTNF 122


>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 GNQDFTNYD 9
GN DFT+ +
Sbjct: 114 GNHDFTSQE 122


>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 5 FTNYDY 10
F NYDY
Sbjct: 199 FDNYDY 204


>sp|Y1201_ARCFU|UNCHARACTERIZED protein AF_1201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GNQDFTNYDY 10
GN+ FTN +Y
Sbjct: 165 GNRWFTNIEY 174




84|SequenceR|425|416|HPGVVGNQDF

>sp|END4_THEVO|PROBABLE endonuclease 4|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HPGVVGNQD 9
HPG GN+D
Sbjct: 117 HPGSNGNKD 125


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 HPGVVGNQ 8
HPG+VG++
Sbjct: 289 HPGLVGSE 296


>sp|TRUB_SACS2|PROBABLE tRNA pseudouridine synthase B|Saccharolobus solfataricus (strain

Query: 2 PGVVGNQDF 10
PGVV Q+F
Sbjct: 185 PGVVAYQNF 193


>sp|Y589_METJA|UNCHARACTERIZED protein MJ0589|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HPGVVGNQD 9
HP +V N+D
Sbjct: 87 HPKIVENED 95


>sp|G6PI_THELI|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus litoralis

Query: 1 HPGVVGNQDF 10
+PG VGN+ F
Sbjct: 75 YPGKVGNEFF 84


>sp|ISF1_ARCFU|IRON-SULFUR flavoprotein AF_1436|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGVVGNQDF 10
PG VG++D
Sbjct: 155 PGEVGDEDL 163


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGVVGNQDF 10
PG+ GN +
Sbjct: 267 PGIYGNDSY 275




85|SequenceR|430|421|NVVLPHPGVV

>sp|EF1A_METS3|ELONGATION factor 1-alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 VVLPHPGVV 10
VVL HPGV+
Sbjct: 313 VVLQHPGVI 321


>sp|EF1A_METTH|ELONGATION factor 1-alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 VVLPHPGVV 10
VVL HPGV+
Sbjct: 313 VVLQHPGVI 321


>sp|Y1383_THEVO|MEMO1 family protein TV1383|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VVLPHPGVV 10
VV+PH G+V
Sbjct: 40 VVVPHAGIV 48


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VVLPHPGVV 10
VVL HPGV+
Sbjct: 313 VVLQHPGVM 321


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 VVLPHPGV 9
+V+P PGV
Sbjct: 773 IVMPEPGV 780


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 1 NVVLPHPGV 9
N +LPH GV
Sbjct: 296 NYLLPHLGV 304


>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 1 NVVLPHPG 8
NV++PH G
Sbjct: 50 NVMVPHAG 57


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 3 VLPHP 7
VLPHP
Sbjct: 234 VLPHP 238


>sp|MSMJL_METJA|LARGE-CONDUCTANCE mechanosensitive channel MscMJLR|Methanocaldococcus jannaschii

Query: 1 NVVLPHPGV 9
N++L HP V
Sbjct: 282 NILLEHPNV 290


>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 1 NVVLPHPGV 9
N +LPH G+
Sbjct: 296 NYLLPHMGI 304


>sp|RS4E_PICTO|SMALL ribosomal subunit protein eS4|Picrophilus torridus (strain ATCC

Query: 2 VVLPHPG 8
V+LP PG
Sbjct: 104 VILPKPG 110


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 NVVLPHPGVV 10
NV HPGVV
Sbjct: 72 NVGHTHPGVV 81


>sp|Y237_THEAC|MEMO1 family protein Ta0237|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VLPHPGVV 10
V+PH G++
Sbjct: 41 VVPHAGII 48


>sp|RL1_META3|LARGE ribosomal subunit protein uL1|Methanococcus aeolicus (strain ATCC

Query: 1 NVVLPH 6
NV+LPH
Sbjct: 47 NVILPH 52


>sp|HMD_METMP|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NVVLPHPGVV 10
N++ HPG V
Sbjct: 196 NIIAYHPGAV 205


>sp|HMD_METM7|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 NVVLPHPGVV 10
N++ HPG V
Sbjct: 196 NIIAYHPGAV 205


>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VVLPHPGV 9
VVL HPG+
Sbjct: 245 VVLRHPGL 252


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 NVVLPHPGV 9
N +LPH GV
Sbjct: 299 NNLLPHMGV 307


>sp|HMD_METM5|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 NVVLPHPGVV 10
N++ HPG V
Sbjct: 196 NIIAYHPGAV 205


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 1 NVVLPHPGVV 10
N+V PGVV
Sbjct: 11 NIVKAFPGVV 20


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VVLPHPG 8
VV P+PG
Sbjct: 277 VVFPYPG 283


>sp|RL1_HYPBU|LARGE ribosomal subunit protein uL1|Hyperthermus butylicus (strain DSM

Query: 2 VVLPHP 7
V+LPHP
Sbjct: 51 VILPHP 56


>sp|Y1590_CALMQ|MEMO1 family protein Cmaq_1590|Caldivirga maquilingensis (strain ATCC

Query: 1 NVVLPHPGVV 10
+V++PH G V
Sbjct: 49 SVIVPHAGYV 58




86|SequenceR|435|426|TAFYMNVVLP

>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 1 TAFYMNVVLP 10
TA Y ++VLP
Sbjct: 638 TAMYSDIVLP 647


>sp|RUXX_THEVO|PUTATIVE snRNP Sm-like protein|Thermoplasma volcanium (strain ATCC 51530

Query: 4 YMNVVL 9
YMNVVL
Sbjct: 42 YMNVVL 47




87|SequenceR|440|431|HGSFGTAFYM

>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 1 HGSFGTAFY 9
HG G AFY
Sbjct: 83 HGPIGCAFY 91


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HGSFGTA 7
H SFGTA
Sbjct: 155 HSSFGTA 161


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HGSFGTA 7
H SFGTA
Sbjct: 27 HSSFGTA 33


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 1 HGSFGTAFY 9
HG G A+Y
Sbjct: 67 HGPIGCAYY 75


>sp|GPDA_METTH|GLYCEROL-3-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 2 GSFGTA 7
GSFGTA
Sbjct: 9 GSFGTA 14


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GSFGTAFY 9
G+FGTA +
Sbjct: 193 GAFGTAIF 200


>sp|DHYS_AERPE|PROBABLE deoxyhypusine synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GSFGTAFYM 10
G+FGT+ +M
Sbjct: 189 GAFGTSLFM 197


>sp|Y995_METJA|UNCHARACTERIZED protein MJ0995|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HGSFG 5
HGSFG
Sbjct: 91 HGSFG 95


>sp|PYRK_ARCFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Archaeoglobus fulgidus

Query: 2 GSFGTAF 8
G+FG+AF
Sbjct: 78 GAFGSAF 84




88|SequenceR|445|436|AQQLGHGSFG

>sp|RIFK_AERPE|RIBOFLAVIN kinase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LGHGSF 9
LGHGSF
Sbjct: 14 LGHGSF 19


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 1 AQQLGHG 7
AQ+LGHG
Sbjct: 592 AQRLGHG 598


>sp|CAS2_KORCO|CRISPR-ASSOCIATED endoribonuclease Cas2|Korarchaeum cryptofilum (strain OPF8)

Query: 3 QLGHGSFG 10
Q+G G FG
Sbjct: 82 QIGRGKFG 89


>sp|YC12A_PYRHO|UPF0248 protein PH1212.1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 QLGHGSF 9
+LGHG F
Sbjct: 46 ELGHGYF 52


>sp|Y940_THEON|UPF0248 protein TON_0940|Thermococcus onnurineus (strain NA1)

Query: 3 QLGHGSF 9
+LGHG F
Sbjct: 46 ELGHGYF 52


>sp|Y315_THEKO|UPF0248 protein TK0315|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QLGHGSF 9
+LGHG F
Sbjct: 46 ELGHGYF 52


>sp|Y1300_PYRFU|UPF0248 protein PF1300|Pyrococcus furiosus (strain ATCC 43587

Query: 3 QLGHGSF 9
+LGHG F
Sbjct: 46 ELGHGYF 52


>sp|Y1058_PYRAB|UPF0248 protein PYRAB10580|Pyrococcus abyssi (strain GE5 /

Query: 3 QLGHGSF 9
+LGHG F
Sbjct: 46 ELGHGYF 52


>sp|ASD_HALSA|PUTATIVE archaetidylserine decarboxylase proenzyme|Halobacterium salinarum

Query: 3 QLGHGSFG 10
+LGH SFG
Sbjct: 156 RLGHISFG 163


>sp|Y995_METJA|UNCHARACTERIZED protein MJ0995|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 HGSFG 10
HGSFG
Sbjct: 91 HGSFG 95


>sp|Y1209_THEGJ|UPF0248 protein TGAM_1209|Thermococcus gammatolerans (strain DSM 15229

Query: 3 QLGHGSF 9
+LGHG F
Sbjct: 46 ELGHGYF 52


>sp|MER_METKA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 AQQLGHGSFG 10
A+ +G G FG
Sbjct: 275 AEAIGKGDFG 284




89|SequenceR|450|441|RGIGPAQQLG

>sp|Y382_METBU|UPF0758 protein Mbur_0382|Methanococcoides burtonii (strain DSM 6242

Query: 1 RGIGPAQ 7
RGIGPA+
Sbjct: 76 RGIGPAK 82


>sp|PURA1_METAC|ADENYLOSUCCINATE synthetase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RGIGPA 6
RGIGPA
Sbjct: 129 RGIGPA 134


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 4 GPAQQLG 10
GPA QLG
Sbjct: 154 GPAVQLG 160


>sp|RS19_AERPE|SMALL ribosomal subunit protein uS19|Aeropyrum pernix (strain ATCC

Query: 1 RGIGPAQQ 8
RG+ PAQQ
Sbjct: 44 RGLTPAQQ 51


>sp|FEN_SACS2|FLAP endonuclease 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RGIGPAQQL 9
RGIGP + L
Sbjct: 243 RGIGPERAL 251


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 1 RGIGPA 6
RGIGPA
Sbjct: 114 RGIGPA 119


>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium pump|Methanosarcina

Query: 1 RGIGPA 6
RGIGPA
Sbjct: 114 RGIGPA 119


>sp|Y4442_HALS3|UPF0200 protein OE_4442F|Halobacterium salinarum (strain ATCC 29341

Query: 1 RGIGPAQQLG 10
RG+ PAQ G
Sbjct: 42 RGLDPAQHHG 51


>sp|Y2452_HALSA|UPF0200 protein VNG_2452C|Halobacterium salinarum (strain ATCC 700922

Query: 1 RGIGPAQQLG 10
RG+ PAQ G
Sbjct: 42 RGLDPAQHHG 51


>sp|TRPD_HALMA|ANTHRANILATE phosphoribosyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 IGPAQQLG 10
IGP Q+LG
Sbjct: 161 IGPRQELG 168


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RGIGPAQQLG 10
RG+ PA+ LG
Sbjct: 540 RGVEPAKILG 549


>sp|PTH_METAC|PEPTIDYL-TRNA hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GIGPAQQ 8
GIGPA++
Sbjct: 96 GIGPAKE 102


>sp|PTH_METBF|PEPTIDYL-TRNA hydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GIGPAQQ 8
GIGPA++
Sbjct: 96 GIGPAKE 102


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RGIGPA 6
RG+GPA
Sbjct: 108 RGLGPA 113


>sp|FLAB4_PYRAB|FLAGELLIN B4|Pyrococcus abyssi (strain GE5 /

Query: 1 RGIGPAQQL 9
RGIGP ++
Sbjct: 181 RGIGPGTRI 189


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 2 GIGPAQQLG 10
G GPA LG
Sbjct: 267 GAGPASHLG 275


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 2 GIGPAQQLG 10
G GPA LG
Sbjct: 256 GAGPADYLG 264


>sp|PSB_METPE|PROTEASOME subunit beta|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 GIGPAQQLG 10
G+G AQQL
Sbjct: 57 GVGDAQQLA 65


>sp|PSB_METB6|PROTEASOME subunit beta|Methanoregula boonei (strain DSM 21154

Query: 2 GIGPAQQLG 10
G+G AQQL
Sbjct: 59 GVGDAQQLA 67


>sp|PTH_METMA|PEPTIDYL-TRNA hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GIGPAQQ 8
GIGPA++
Sbjct: 96 GIGPAKE 102


>sp|PSB_METLZ|PROTEASOME subunit beta|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GIGPAQQL 9
G+G AQQL
Sbjct: 59 GVGDAQQL 66




90|SequenceR|455|446|MEAVARGIGP

>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 MEAVARGIGP 10
+EA+ RG+ P
Sbjct: 59 IEAIKRGVSP 68


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 MEAVARGIGP 10
+EA+ +GI P
Sbjct: 56 IEAIRKGIAP 65


>sp|Y104_SACS2|UNCHARACTERIZED aminotransferase SSO0104|Saccharolobus solfataricus (strain ATCC

Query: 1 MEAVARGI 8
MEA+ RGI
Sbjct: 283 MEAIRRGI 290


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 MEAVARGI 8
MEA++RG+
Sbjct: 964 MEAISRGV 971


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 MEAVARGIGP 10
+EA+ RG+ P
Sbjct: 58 VEAIRRGVHP 67


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 2 EAVARGIGP 10
EA+AR GP
Sbjct: 66 EAIARAAGP 74


>sp|WTPB_THEKO|MOLYBDATE/TUNGSTATE transport system permease protein|Thermococcus kodakarensis (strain

Query: 1 MEAVARGIG 9
+EAVAR +G
Sbjct: 149 LEAVARTLG 157


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 2 EAVARGIGP 10
A RGIGP
Sbjct: 110 NAATRGIGP 118


>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium pump|Methanosarcina

Query: 2 EAVARGIGP 10
A RGIGP
Sbjct: 110 NAATRGIGP 118


>sp|DNLI_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 EAVARGIGP 10
EA+AR GP
Sbjct: 72 EAIARAAGP 80


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MEAVARGIG 9
+E +ARG+G
Sbjct: 233 LEGIARGMG 241


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 1 MEAVARGI 8
MEAV RG+
Sbjct: 532 MEAVDRGV 539


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM 15229

Query: 1 MEAVARGI 8
MEAV RG+
Sbjct: 532 MEAVDRGV 539


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 1 MEAVARGI 8
MEAV RG+
Sbjct: 532 MEAVDRGV 539


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain

Query: 2 EAVARGIGP 10
EAV +GI P
Sbjct: 48 EAVNKGIAP 56


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 MEAVARGIG 9
+EA+ RG+G
Sbjct: 8 LEAIRRGLG 16




91|SequenceR|460|451|RGKLVMEAVA

>sp|RS6E_HALSA|SMALL ribosomal subunit protein eS6|Halobacterium salinarum (strain ATCC

Query: 1 RGKLVMEAVA 10
RGK V EAVA
Sbjct: 97 RGKEVSEAVA 106


>sp|RS6E_HALS3|SMALL ribosomal subunit protein eS6|Halobacterium salinarum (strain ATCC

Query: 1 RGKLVMEAVA 10
RGK V EAVA
Sbjct: 97 RGKEVSEAVA 106


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GKLVMEAVA 10
G+LV EAVA
Sbjct: 88 GELVFEAVA 96


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 3 KLVMEAVA 10
KLV+EA+A
Sbjct: 136 KLVLEAIA 143


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 3 KLVMEAVA 10
KLV+EA+A
Sbjct: 136 KLVLEAIA 143




92|SequenceR|465|456|DITQFRGKLV

>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 1 DITQFRGKLV 10
+ITQ RG+LV
Sbjct: 644 EITQRRGQLV 653


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DITQFRGKLV 10
+ITQ RG+LV
Sbjct: 644 EITQRRGQLV 653


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DITQFRGKLV 10
+ITQ GKLV
Sbjct: 1138 EITQISGKLV 1147


>sp|Y1566_METJA|UNCHARACTERIZED protein MJ1566|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DITQFRGKL 9
DIT+ RG+L
Sbjct: 264 DITEIRGEL 272


>sp|GPGS_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DITQFRGK 8
D+T F+GK
Sbjct: 115 DLTSFKGK 122


>sp|Y1513_PYRHO|UNCHARACTERIZED protein PH1513|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DITQFRGKLV 10
DIT+FR + +
Sbjct: 11 DITKFRAEAI 20


>sp|NURA_SULTO|DNA double-strand break repair nuclease|Sulfurisphaera tokodaii (strain

Query: 2 ITQFRGKLV 10
I++++GKLV
Sbjct: 187 ISKYKGKLV 195


>sp|Y1536_PYRFU|UNCHARACTERIZED protein PF1536|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DITQFRGKLV 10
DIT+FR + +
Sbjct: 8 DITKFRAEAI 17


>sp|Y1177_METJA|PUTATIVE transport protein MJ1177|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ITQFRGKLV 10
++QF GK++
Sbjct: 131 VSQFSGKII 139


>sp|IXTPA_THEAC|DITP/XTP pyrophosphatase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ITQFRGKLV 10
ITQF GK++
Sbjct: 118 ITQFIGKVM 126


>sp|RUXX_THEKO|PUTATIVE snRNP Sm-like protein|Thermococcus kodakarensis (strain ATCC

Query: 4 QFRGKLV 10
+FRGKL+
Sbjct: 26 EFRGKLI 32


>sp|RUXX_PYRFU|PUTATIVE snRNP Sm-like protein|Pyrococcus furiosus (strain ATCC 43587

Query: 4 QFRGKLV 10
+FRGKL+
Sbjct: 26 EFRGKLI 32


>sp|Y1865_ARCFU|UNCHARACTERIZED protein AF_1865|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ITQFRGKLV 10
+T+FRG+++
Sbjct: 261 LTKFRGRIL 269


>sp|PYRB_SULAC|ASPARTATE carbamoyltransferase catalytic subunit|Sulfolobus acidocaldarius

Query: 2 ITQFRGKLV 10
+T+FR KLV
Sbjct: 171 LTRFRPKLV 179


>sp|RUXX_THEGJ|PUTATIVE snRNP Sm-like protein|Thermococcus gammatolerans (strain DSM

Query: 4 QFRGKLV 10
+FRGKL+
Sbjct: 26 EFRGKLI 32




93|SequenceR|470|461|LFPSLDITQF

>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 LFPSLDITQF 10
LFPSL QF
Sbjct: 253 LFPSLRFNQF 262


>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LFPSLDITQF 10
L+PS+D+ +F
Sbjct: 102 LYPSIDMLRF 111




94|SequenceR|475|466|YFRTFLFPSL

>sp|PCNA3_SULTO|DNA polymerase sliding clamp 3|Sulfurisphaera tokodaii (strain DSM

Query: 1 YFRTFLFPSL 10
Y RTF FPS+
Sbjct: 105 YERTFTFPSI 114


>sp|Y797_METJA|UNCHARACTERIZED ABC transporter permease MJ0797|Methanocaldococcus jannaschii

Query: 1 YFRTFLFP 8
Y TFLFP
Sbjct: 160 YNSTFLFP 167


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 FRTFLFPSL 10
F T +FP+L
Sbjct: 312 FHTIIFPAL 320


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 FRTFLFPSL 10
F T +FP+L
Sbjct: 297 FHTIIFPAL 305




95|SequenceR|480|471|IKEGLYFRTF

>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IKEGLYFRT 9
I EGL+F+T
Sbjct: 288 IAEGLFFKT 296


>sp|GCSH_PYRFU|PROBABLE glycine cleavage system H|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IKEGLYF 7
IKEGLY+
Sbjct: 9 IKEGLYY 15


>sp|CSG_METAC|MAJOR S-layer protein|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IKEGLYFRT 9
I EGLYF T
Sbjct: 290 IGEGLYFAT 298


>sp|GCSH_THEKO|PROBABLE glycine cleavage system H|Thermococcus kodakarensis (strain ATCC

Query: 1 IKEGLYF 7
+KEGLY+
Sbjct: 9 VKEGLYY 15


>sp|GCSH_THEGJ|PROBABLE glycine cleavage system H|Thermococcus gammatolerans (strain DSM

Query: 1 IKEGLYF 7
+KEGLY+
Sbjct: 9 VKEGLYY 15


>sp|GCSH_PYRHO|PROBABLE glycine cleavage system H|Pyrococcus horikoshii (strain ATCC

Query: 1 IKEGLYF 7
+KEGLY+
Sbjct: 9 VKEGLYY 15


>sp|GCSH_PYRAB|PROBABLE glycine cleavage system H|Pyrococcus abyssi (strain GE5 /

Query: 1 IKEGLYF 7
+KEGLY+
Sbjct: 9 VKEGLYY 15


>sp|CSG_METBF|MAJOR S-layer protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 IKEGLYFR 8
I EG+YF+
Sbjct: 555 IGEGMYFK 562


>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 KEGLYFRTF 10
K YFR+F
Sbjct: 361 KSAFYFRSF 369


>sp|RPO5_NITMS|DNA-DIRECTED RNA polymerase subunit Rpo5|Nitrosopumilus maritimus (strain

Query: 3 EGLYFR 8
EGLY+R
Sbjct: 73 EGLYYR 78


>sp|Y1314_ARCFU|UNCHARACTERIZED protein AF_1314|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKEGLYF 7
+KEG YF
Sbjct: 51 VKEGRYF 57


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKEGLY 6
IKEGLY
Sbjct: 334 IKEGLY 339


>sp|PNPH_ARCFU|PROBABLE 6-oxopurine nucleoside phosphorylase|Archaeoglobus fulgidus (strain

Query: 1 IKEGLYFRT 9
I +G+YF+T
Sbjct: 143 IDKGVYFQT 151


>sp|PUR7_METBF|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IKEGLYFRT 9
IKEG F+T
Sbjct: 106 IKEGTVFKT 114


>sp|METK_THEKO|S-ADENOSYLMETHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KEGLYFRT 9
KEG+Y+ T
Sbjct: 266 KEGIYYIT 273


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IKEGLYFRT 9
+KE LYF T
Sbjct: 312 LKEDLYFVT 320




96|SequenceR|486|476|IINNEQIKEGL

>sp|Y453_METS3|PUTATIVE HTH-type transcriptional regulatory protein|Methanobrevibacter

Query: 1 IINNEQIKEGL 11
IINN++IK+ L
Sbjct: 272 IINNDKIKDSL 282


>sp|Y1177_METJA|PUTATIVE transport protein MJ1177|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IINNEQI 7
IINNEQI
Sbjct: 112 IINNEQI 118


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 INNEQIKEGL 11
+N+E IKEGL
Sbjct: 945 MNDEVIKEGL 954


>sp|HMGCS_METS3|HYDROXYMETHYLGLUTARYL-COA synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 NEQIKEGL 11
+EQIK+GL
Sbjct: 252 SEQIKQGL 259


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IINNEQIKEGL 11
IIN E+IK+ L
Sbjct: 16 IINQEEIKKAL 26


>sp|TDXH_AERPE|PEROXIREDOXIN pernix (strain ATCC 700893

Query: 3 NNEQIKEGL 11
NNE I EGL
Sbjct: 177 NNEIIGEGL 185


>sp|HEM1_SACI7|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 INNEQIKEGL 11
INN+Q+KE L
Sbjct: 353 INNQQVKEIL 362


>sp|HEM1_SACI6|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 INNEQIKEGL 11
INN+Q+KE L
Sbjct: 353 INNQQVKEIL 362


>sp|HEM1_SACI4|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 INNEQIKEGL 11
INN+Q+KE L
Sbjct: 353 INNQQVKEIL 362


>sp|HEM1_SACI3|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 INNEQIKEGL 11
INN+Q+KE L
Sbjct: 353 INNQQVKEIL 362


>sp|HEM1_SACI2|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 INNEQIKEGL 11
INN+Q+KE L
Sbjct: 353 INNQQVKEIL 362


>sp|HEM1_SACI1|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 INNEQIKEGL 11
INN+Q+KE L
Sbjct: 353 INNQQVKEIL 362


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain

Query: 4 NEQIKEG 10
NEQIK G
Sbjct: 72 NEQIKRG 78


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 NNEQIKEGL 11
N EQ++EG+
Sbjct: 340 NPEQVREGV 348


>sp|CHEB_ARCFU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Archaeoglobus fulgidus

Query: 3 NNEQIKEGL 11
NNE++K+G+
Sbjct: 217 NNERVKDGV 225


>sp|COAD_PYRAE|PHOSPHOPANTETHEINE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 INNEQIKEGL 11
IN+E+ K GL
Sbjct: 110 INDERAKRGL 119


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus

Query: 2 INNEQIKE 9
I NE+IKE
Sbjct: 78 IQNEKIKE 85


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 INNEQIKEGL 11
+N E IKEG+
Sbjct: 379 VNEEVIKEGI 388


>sp|RS4E_SACS2|SMALL ribosomal subunit protein eS4|Saccharolobus solfataricus (strain

Query: 1 IINNEQIKEG 10
IIN IKEG
Sbjct: 121 IINKTTIKEG 130


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IINNEQIKEGL 11
IIN E IKE L
Sbjct: 353 IINAESIKELL 363


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 INNEQIKEGL 11
I+N Q +EGL
Sbjct: 429 IDNFQFREGL 438


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IINNEQIKEG 10
I+N E +KEG
Sbjct: 440 IVNIEDVKEG 449


>sp|PGK2_METKA|2-PHOSPHOGLYCERATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 IINNEQIKE 9
+INNE I E
Sbjct: 292 VINNEHIDE 300


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 1 IINNEQIKEG 10
IINN+ EG
Sbjct: 118 IINNDDFNEG 127


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IINNEQIKEGL 11
++N+E++K+G+
Sbjct: 500 LLNDEKLKKGV 510


>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 1 IINNEQIKE 9
+INN+Q+ E
Sbjct: 257 VINNKQVGE 265




THE END