FXRD1_HUMAN Blast Output
Archaea
1|Sequence|1|10|MIRRVLPHGM

>sp|DPHB_METKA|DIPHTHINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 IRRVLPH 8
IRRVLPH
Sbjct: 250 IRRVLPH 256


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MIRRVLPHG 9
M++RV+P G
Sbjct: 466 MLKRVVPKG 474


>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 5 VLPHGM 10
VLPHG+
Sbjct: 194 VLPHGL 199


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 2 IRRVLPHGM 10
IRR+ HGM
Sbjct: 289 IRRIQKHGM 297


>sp|GUAAB_METJA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocaldococcus

Query: 6 LPHGM 10
LPHGM
Sbjct: 149 LPHGM 153


>sp|PEPQ_PYRHO|XAA-PRO dipeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RRVLPHGM 10
R LPHG+
Sbjct: 190 RSALPHGV 197


>sp|PEPQ_PYRFU|XAA-PRO dipeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RRVLPHGM 10
R LPHG+
Sbjct: 187 RSALPHGV 194


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 RRVLPHG 9
RRVL HG
Sbjct: 576 RRVLMHG 582


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 RRVLPHG 9
RRVL HG
Sbjct: 576 RRVLMHG 582


>sp|RPO6_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo6|Sulfolobus acidocaldarius (strain

Query: 2 IRRVLPHG 9
IRR+ P+G
Sbjct: 69 IRRIYPNG 76


>sp|RPO6_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo6|Sulfurisphaera tokodaii (strain DSM

Query: 2 IRRVLPHG 9
+RRV P+G
Sbjct: 66 VRRVYPNG 73


>sp|HEM4_METTH|PUTATIVE uroporphyrinogen-III synthase|Methanothermobacter

Query: 3 RRVLPHGM 10
R+VLP G+
Sbjct: 134 RKVLPRGL 141


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MIRRVLPHGM 10
++ +LPHG+
Sbjct: 279 LLNEMLPHGV 288


>sp|Y706_METJA|UNCHARACTERIZED protein MJ0706|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IRRVLPHGM 10
I VLPHG+
Sbjct: 133 IYLVLPHGI 141


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RRVLPHG 9
RRVL HG
Sbjct: 588 RRVLVHG 594


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 MIRRVLPHG 9
+IR PHG
Sbjct: 3 LIREARPHG 11




2|Sequence|6|15|LPHGMGRGLL

>sp|RL1_METAC|LARGE ribosomal subunit protein uL1|Methanosarcina acetivorans (strain

Query: 1 LPHGMGRGL 9
LPHG+G+ L
Sbjct: 50 LPHGLGKEL 58


>sp|RL1_METMA|LARGE ribosomal subunit protein uL1|Methanosarcina mazei (strain ATCC

Query: 1 LPHGMGRGL 9
LPHG+G+ L
Sbjct: 50 LPHGLGKEL 58


>sp|RL1_METBF|LARGE ribosomal subunit protein uL1|Methanosarcina barkeri (strain

Query: 1 LPHGMGRGL 9
LPHG+G+ L
Sbjct: 50 LPHGLGKEL 58


>sp|RL1_ARCFU|LARGE ribosomal subunit protein uL1|Archaeoglobus fulgidus (strain ATCC

Query: 1 LPHGMGR 7
LPHG+G+
Sbjct: 52 LPHGLGK 58


>sp|RL1_METTP|LARGE ribosomal subunit protein uL1|Methanothrix thermoacetophila

Query: 1 LPHGMGR 7
LPHG GR
Sbjct: 49 LPHGRGR 55


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 2 PHGMGR 7
PHGMG+
Sbjct: 515 PHGMGK 520


>sp|RL1_THEKO|LARGE ribosomal subunit protein uL1|Thermococcus kodakarensis (strain

Query: 1 LPHGMGR 7
LPHG G+
Sbjct: 52 LPHGRGK 58


>sp|RL1_PYRHO|LARGE ribosomal subunit protein uL1|Pyrococcus horikoshii (strain ATCC

Query: 1 LPHGMGR 7
LPHG G+
Sbjct: 55 LPHGRGK 61


>sp|RL1_PYRFU|LARGE ribosomal subunit protein uL1|Pyrococcus furiosus (strain ATCC

Query: 1 LPHGMGR 7
LPHG G+
Sbjct: 52 LPHGRGK 58


>sp|RL1_PYRAB|LARGE ribosomal subunit protein uL1|Pyrococcus abyssi (strain GE5 /

Query: 1 LPHGMGR 7
LPHG G+
Sbjct: 55 LPHGRGK 61


>sp|RL1_METKA|LARGE ribosomal subunit protein uL1|Methanopyrus kandleri (strain AV19

Query: 1 LPHGMGR 7
LPHG G+
Sbjct: 52 LPHGRGK 58


>sp|RL1_METJA|LARGE ribosomal subunit protein uL1|Methanocaldococcus jannaschii

Query: 1 LPHGMGR 7
LPHG G+
Sbjct: 50 LPHGRGK 56


>sp|RL1_META3|LARGE ribosomal subunit protein uL1|Methanococcus aeolicus (strain ATCC

Query: 1 LPHGMGR 7
LPHG G+
Sbjct: 50 LPHGRGK 56


>sp|RS7_METTH|SMALL ribosomal subunit protein uS7|Methanothermobacter

Query: 1 LPHGMGR 7
+PH MGR
Sbjct: 31 VPHTMGR 37


>sp|RS7_METST|SMALL ribosomal subunit protein uS7|Methanosphaera stadtmanae (strain

Query: 1 LPHGMGR 7
+PH MGR
Sbjct: 32 VPHTMGR 38


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PHGMGRGL 9
PHG GR L
Sbjct: 406 PHGAGRVL 413


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 LPHGMGRG 8
LP+G G+G
Sbjct: 99 LPYGGGKG 106


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 1 LPHGMGRG 8
LP+G G+G
Sbjct: 99 LPYGGGKG 106


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LPHGMGRG 8
LP+G G+G
Sbjct: 99 LPYGGGKG 106


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 1 LPHGMGRG 8
LP+G G+G
Sbjct: 99 LPYGGGKG 106


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LPHGMGRG 8
LP+G G+G
Sbjct: 99 LPYGGGKG 106


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPHGMGRG 8
LP+G G+G
Sbjct: 99 LPYGGGKG 106


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 1 LPHGMGRG 8
LP+G G+G
Sbjct: 99 LPYGGGKG 106


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 LPHGMGRG 8
LP+G G+G
Sbjct: 99 LPYGGGKG 106


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 2 PHGMGR 7
PHG GR
Sbjct: 403 PHGAGR 408


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 LPHGMGRGLL 10
LPHG+G ++
Sbjct: 79 LPHGVGASIV 88


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HGMGRG 8
HG+G+G
Sbjct: 81 HGLGKG 86


>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LPHGMGRG 8
LP+G G+G
Sbjct: 103 LPYGGGKG 110


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LPHGMGRG 8
LP+G G+G
Sbjct: 106 LPYGGGKG 113


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HGMGRGLL 10
HGM GL+
Sbjct: 421 HGMAAGLI 428


>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii (strain

Query: 1 LPHGMGR 7
+P+GMG+
Sbjct: 270 MPYGMGK 276




3|Sequence|11|20|GRGLLTRRPG

>sp|RS8E_THEON|SMALL ribosomal subunit protein eS8|Thermococcus onnurineus (strain NA1)

Query: 1 GRGLLTRRPG 10
GR ++T RPG
Sbjct: 106 GRAIVTSRPG 115


>sp|RS8E_PYRIL|SMALL ribosomal subunit protein eS8|Pyrobaculum islandicum (strain DSM

Query: 1 GRGLLTRRPG 10
GR ++T RPG
Sbjct: 111 GRAVVTSRPG 120


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 3 GLLTRRPG 10
G+LT RPG
Sbjct: 629 GVLTERPG 636


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GRGLLTRRPG 10
GRG TRR G
Sbjct: 133 GRGESTRRNG 142


>sp|RS8E_METHJ|SMALL ribosomal subunit protein eS8|Methanospirillum hungatei JF-1

Query: 1 GRGLLTRRPG 10
GR +T RPG
Sbjct: 105 GRARITSRPG 114




4|Sequence|16|25|TRRPGTRRGG

>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 TRRPGTRRGG 10
TR+P T RGG
Sbjct: 342 TRKPKTYRGG 351


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TRRPGTRRGG 10
TR P T +GG
Sbjct: 488 TRNPKTYKGG 497


>sp|SPEB_METJA|AGMATINASE jannaschii (strain ATCC 43067

Query: 3 RPGTRRGG 10
+PG R GG
Sbjct: 37 KPGAREGG 44


>sp|NNR_METTH|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanothermobacter

Query: 1 TRRPGTRRG 9
+RRPG+ +G
Sbjct: 245 SRRPGSHKG 253




5|Sequence|21|30|TRRGGFSLDW

>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RRGGFSLDW 10
+R GFSLDW
Sbjct: 146 KRMGFSLDW 154


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 RRGGFSLDW 10
+R GFSLDW
Sbjct: 146 KRMGFSLDW 154


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 RRGGFSLDW 10
+R GFSLDW
Sbjct: 146 KRMGFSLDW 154


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RRGGFSLDW 10
+R GFSLDW
Sbjct: 136 KRMGFSLDW 144


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 RRGGFSLDW 10
++ GFSLDW
Sbjct: 143 KKMGFSLDW 151


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RRGGFSLDW 10
RR G+S+DW
Sbjct: 127 RRMGYSIDW 135


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 RGGFSLDW 10
R GFS+DW
Sbjct: 139 RAGFSVDW 146


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RGGFSLDW 10
R GFS+DW
Sbjct: 139 RAGFSVDW 146


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RGGFSLDW 10
R GFS+DW
Sbjct: 139 RAGFSVDW 146


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 RGGFSLDW 10
R GFS+DW
Sbjct: 139 RAGFSVDW 146


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RGGFSLDW 10
R GFS+DW
Sbjct: 139 RAGFSVDW 146


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RRGGFSLDW 10
++ GF+LDW
Sbjct: 141 KKMGFALDW 149


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 RRGGFSLDW 10
+R G+S+DW
Sbjct: 131 KRMGYSIDW 139


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 RGGFSLDW 10
R GFS+DW
Sbjct: 132 RLGFSVDW 139


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RGGFSLDW 10
R GFS+DW
Sbjct: 132 RLGFSVDW 139


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RGGFSLDW 10
R GFS+DW
Sbjct: 132 RLGFSVDW 139


>sp|Y2181_ARCFU|UNCHARACTERIZED protein AF_2181|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RGGFSLDW 10
+ GF LDW
Sbjct: 42 KQGFDLDW 49


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii

Query: 5 GFSLDW 10
GF LDW
Sbjct: 83 GFKLDW 88


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RRGGFSLDW 10
R G+S+DW
Sbjct: 136 RNIGYSIDW 144


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RRGGFSLDW 10
+R GFS DW
Sbjct: 130 QRLGFSQDW 138


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 RRGGFSLDW 10
R G+S+DW
Sbjct: 136 RSIGYSIDW 144


>sp|NDK_PICTO|NUCLEOSIDE diphosphate kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 TRRGGFSLD 9
T RG FSLD
Sbjct: 100 TIRGDFSLD 108


>sp|CAS7_HALVD|CRISPR-ASSOCIATED protein Cas7|Haloferax volcanii (strain ATCC 29605

Query: 1 TRRGGFSLD 9
R+GGF LD
Sbjct: 173 NRQGGFDLD 181


>sp|NDK_AERPE|NUCLEOSIDE diphosphate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TRRGGFSLD 9
T RG FSLD
Sbjct: 102 TIRGDFSLD 110


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RRGGFSLDW 10
R G+S+DW
Sbjct: 136 RMIGYSIDW 144


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 5 GFSLDW 10
G+S+DW
Sbjct: 150 GYSIDW 155


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RRGGFSLDW 10
R G+S+DW
Sbjct: 136 RMIGYSIDW 144


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 TRRGGFSLDW 10
+R G F+L W
Sbjct: 180 SRGGSFTLAW 189


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TRRGGFSLDW 10
+R G F+L W
Sbjct: 180 SRGGSFTLAW 189


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TRRGGFSLDW 10
+R G F+L W
Sbjct: 180 SRGGSFTLAW 189


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GFSLDW 10
G+S+DW
Sbjct: 136 GYSIDW 141


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RRGGFSLDW 10
R G+S+DW
Sbjct: 137 RSIGYSIDW 145


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 1 TRRGGF 6
TR+GGF
Sbjct: 648 TRKGGF 653


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 GFSLDW 10
G+S+DW
Sbjct: 153 GYSIDW 158


>sp|SERA_METTH|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 RGGFSLD 9
RGGFS++
Sbjct: 422 RGGFSVE 428


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 GFSLDW 10
G+S+DW
Sbjct: 153 GYSIDW 158


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TRRGGFSLDW 10
+ RGG +DW
Sbjct: 12 SSRGGKMMDW 21


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RGGFSLDW 10
R G+S DW
Sbjct: 126 RIGYSADW 133


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RGGFSLDW 10
R G+S DW
Sbjct: 126 RIGYSADW 133


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 RGGFSLDW 10
R G+S DW
Sbjct: 126 RIGYSADW 133


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RGGFSLDW 10
R G+S DW
Sbjct: 126 RIGYSADW 133


>sp|NNR_METTH|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanothermobacter

Query: 4 GGFSLDW 10
GGFS+D+
Sbjct: 121 GGFSVDF 127


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 4 GGFSLD 9
GGFSLD
Sbjct: 245 GGFSLD 250


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RRGGFSLDW 10
R GFS DW
Sbjct: 129 RTLGFSQDW 137


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 1 TRRGGFSL 8
RR GFSL
Sbjct: 400 ARRAGFSL 407


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 GFSLDW 10
G+S+DW
Sbjct: 132 GYSIDW 137




6|Sequence|26|35|FSLDWDGKVS

>sp|PSB2_IGNH4|PROTEASOME subunit beta 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 FSLDWDGKVS 10
+SLDW G V+
Sbjct: 124 YSLDWFGTVA 133


>sp|PSB1_THEPD|PROTEASOME subunit beta 1|Thermofilum pendens (strain DSM 2475

Query: 1 FSLDWDGKVS 10
FS+DW G V+
Sbjct: 123 FSVDWLGTVT 132


>sp|Y2191_ARCFU|UNCHARACTERIZED protein AF_2191|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DWDGKV 9
+WDGKV
Sbjct: 103 NWDGKV 108


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FSLDWDGKV 9
+ +DWDG +
Sbjct: 999 WEIDWDGPI 1007


>sp|Y342_METJA|UNCHARACTERIZED protein MJ0342|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SLDWDGK 8
+LDWDG+
Sbjct: 66 ALDWDGQ 72


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSLDW 5
FSLDW
Sbjct: 140 FSLDW 144


>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSLDWDGK 8
+ ++WDGK
Sbjct: 264 YRINWDGK 271


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FSLDW 5
FSLDW
Sbjct: 150 FSLDW 154


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 FSLDW 5
FSLDW
Sbjct: 150 FSLDW 154


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 FSLDW 5
FSLDW
Sbjct: 150 FSLDW 154


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FSLDW 5
FSLDW
Sbjct: 147 FSLDW 151


>sp|TYSY_METBU|PUTATIVE thymidylate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 DWDGKV 9
+WDGKV
Sbjct: 97 NWDGKV 102


>sp|HIS4_METAC|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina acetivorans

Query: 2 SLDWDGK 8
+LDW GK
Sbjct: 38 ALDWIGK 44


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LDWDG 7
+DWDG
Sbjct: 37 IDWDG 41


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SLDWDGKVS 10
S+DWD +S
Sbjct: 391 SMDWDWVIS 399


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SLDWDGKVS 10
S+DWD +S
Sbjct: 391 SMDWDWVIS 399


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LDWDGK 8
+DWDG+
Sbjct: 187 IDWDGE 192


>sp|Y1121_PYRAB|UPF0127 protein PYRAB11210|Pyrococcus abyssi (strain GE5 /

Query: 2 SLDWDGKV 9
S+ W+GKV
Sbjct: 10 SVKWEGKV 17


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 SLDWDGKVS 10
S+DWD +S
Sbjct: 391 SMDWDWVIS 399


>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 4 DWDGKVS 10
+WDG +S
Sbjct: 142 EWDGNIS 148


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SLDWDGKVS 10
S+DWD +S
Sbjct: 391 SMDWDWVIS 399


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SLDWDGKVS 10
S+DWD +S
Sbjct: 393 SMDWDWCIS 401


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 SLDWDGKVS 10
+L WDG +S
Sbjct: 283 ALPWDGSLS 291


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 DWDGKVS 10
+WDG+++
Sbjct: 28 EWDGEIT 34


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 SLDWDGKVS 10
S+DWD +S
Sbjct: 416 SMDWDWCIS 424




7|Sequence|31|40|DGKVSEIKKK

>sp|RL29_METM7|LARGE ribosomal subunit protein uL29|Methanococcus maripaludis (strain

Query: 2 GKVSEIKK 9
GK+SEIK+
Sbjct: 45 GKISEIKR 52


>sp|RL29_METM5|LARGE ribosomal subunit protein uL29|Methanococcus maripaludis (strain

Query: 2 GKVSEIKK 9
GK+SEIK+
Sbjct: 45 GKISEIKR 52


>sp|DPCKG_KORCO|GTP-DEPENDENT dephospho-CoA kinase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GKVSEIK 8
GKVSEIK
Sbjct: 13 GKVSEIK 19


>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 1 DGKVSEIKKK 10
DGK E KKK
Sbjct: 80 DGKPPEFKKK 89


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 DGKVSEIK 8
DGK+ EIK
Sbjct: 293 DGKIVEIK 300


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 1 DGKVSEIKKK 10
DGK EIK K
Sbjct: 84 DGKPPEIKAK 93


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DGKVSEIK 8
DGK+ EIK
Sbjct: 293 DGKIVEIK 300


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 1 DGKVSEIKK 9
DGK++ IKK
Sbjct: 26 DGKIAGIKK 34




8|Sequence|36|45|EIKKKIKSIL

>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EIKKKIKSIL 10
E+K+KIKSI+
Sbjct: 33 ELKEKIKSII 42


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EIKKKIKSIL 10
EI KKI SIL
Sbjct: 846 EIAKKIASIL 855


>sp|RPIA_THEVO|RIBOSE-5-PHOSPHATE isomerase A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EIKKKIKSI 9
E++KKIKSI
Sbjct: 190 ELEKKIKSI 198


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 1 EIKKKIKSIL 10
EI+KK SIL
Sbjct: 272 EIRKKYSSIL 281


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EIKKKIKSIL 10
E+ KK+KS+L
Sbjct: 256 ELSKKVKSLL 265


>sp|Y1363_THEAC|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma

Query: 1 EIKKKIKSIL 10
EI KKI S+L
Sbjct: 257 EIMKKISSVL 266




9|Sequence|41|50|IKSILPGRSC

>sp|Y1120_THEKO|UPF0127 protein TK1120|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IKSILPGR 8
+KS++PG+
Sbjct: 126 VKSLIPGK 133


>sp|RSGA_METAC|SMALL ribosomal subunit biogenesis GTPase|Methanosarcina acetivorans

Query: 1 IKSILPGRSC 10
+ +ILP R+C
Sbjct: 96 VVNILPRRTC 105




10|Sequence|46|55|PGRSCDLLQD

>sp|ARSA_METTH|PUTATIVE arsenical pump-driving ATPase|Methanothermobacter

Query: 1 PGRSCDLLQD 10
PG D+LQD
Sbjct: 101 PGMGLDMLQD 110


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 2 GRSCDLLQ 9
GRSC L+Q
Sbjct: 194 GRSCILMQ 201


>sp|AATE2_METHJ|A-TYPE ATP synthase subunit E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GRSCDLLQD 10
G CD++QD
Sbjct: 142 GIVCDIMQD 150


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PGRSCDLL 8
PG+S DL+
Sbjct: 288 PGKSADLV 295


>sp|PURQ_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanopyrus kandleri (strain AV19 /

Query: 1 PGRSCDL 7
PG +CDL
Sbjct: 10 PGTNCDL 16


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PGRSCDLL 8
PGR DL+
Sbjct: 497 PGRGADLM 504


>sp|APGM_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 3 RSCDLLQ 9
R CDL+Q
Sbjct: 386 RGCDLVQ 392


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 3 RSCDLLQD 10
R CD +QD
Sbjct: 273 RDCDRVQD 280


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 3 RSCDLLQD 10
R CD +QD
Sbjct: 273 RDCDRVQD 280




11|Sequence|51|60|DLLQDTSHLP

>sp|KCY_PYRAE|CYTIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DLLQDTSHL 9
DL+ DTSHL
Sbjct: 150 DLVLDTSHL 158


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DLLQDTSHLP 10
DLL +T H P
Sbjct: 52 DLLLETRHFP 61


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DLLQDTSHLP 10
DLL DTS P
Sbjct: 246 DLLIDTSGYP 255


>sp|KCY_PYRNV|CYTIDYLATE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DLLQDTSHL 9
DL+ DTS+L
Sbjct: 150 DLVLDTSYL 158


>sp|KCY_PYRIL|CYTIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DLLQDTSHL 9
DL+ DTS+L
Sbjct: 150 DLVLDTSYL 158


>sp|KCY_PYRCJ|CYTIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DLLQDTSHL 9
DL+ DTS+L
Sbjct: 150 DLVLDTSYL 158


>sp|ARLY_METMJ|ARGININOSUCCINATE lyase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DLLQDTSHL 9
DLL D +HL
Sbjct: 36 DLLVDMAHL 44




12|Sequence|56|65|TSHLPPEHSD

>sp|Y2122_ARCFU|UNCHARACTERIZED protein AF_2122|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SHLPPEHSD 10
+HL PEH++
Sbjct: 34 AHLIPEHTN 42


>sp|RL6_METKA|LARGE ribosomal subunit protein uL6|Methanopyrus kandleri (strain AV19 /

Query: 2 SHLPPE 7
SH PPE
Sbjct: 112 SHFPPE 117


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 3 HLPPE 7
HLPPE
Sbjct: 289 HLPPE 293


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 TSHLPPEHSD 10
T +LPP+H +
Sbjct: 342 TMNLPPKHEE 351


>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 2 SHLPPEHS 9
SH PPE++
Sbjct: 97 SHNPPEYT 104


>sp|SDO1_ARCFU|RIBOSOME maturation protein SDO1 homolog|Archaeoglobus fulgidus (strain ATCC

Query: 4 LPPEHS 9
+PPEH+
Sbjct: 170 IPPEHT 175


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 2 SHLPPEHS 9
SH PPE++
Sbjct: 101 SHNPPEYN 108


>sp|GLMM_THEKO|PROBABLE phosphoglucosamine mutase|Thermococcus kodakarensis (strain ATCC

Query: 2 SHLPPEHS 9
SH PPE++
Sbjct: 96 SHNPPEYN 103


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 2 SHLPPEHS 9
SH PPE++
Sbjct: 96 SHNPPEYN 103


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 2 SHLPPEHS 9
SH PPE++
Sbjct: 96 SHNPPEYN 103


>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 2 SHLPPEHS 9
SH PPE++
Sbjct: 88 SHNPPEYN 95


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SHLPPEHS 9
SH PPE++
Sbjct: 88 SHNPPEYN 95


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 2 SHLPPEHS 9
SH PPE++
Sbjct: 88 SHNPPEYN 95


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 2 SHLPPEHS 9
SH PPE++
Sbjct: 88 SHNPPEYN 95


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SHLPPEHS 9
SH PPE++
Sbjct: 89 SHNPPEYN 96


>sp|COFE_METBF|COENZYME F420:L-glutamate ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 PPEHSD 10
PPE+SD
Sbjct: 121 PPENSD 126


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PPEHSD 10
PPEH++
Sbjct: 384 PPEHAE 389


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM

Query: 2 SHLPPEHS 9
SH PPE++
Sbjct: 91 SHNPPEYN 98


>sp|AGOG_METMP|N-GLYCOSYLASE/DNA lyase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TSHLPPEHSD 10
T+ +PP H D
Sbjct: 210 TAKIPPLHID 219


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 3 HLPPE 7
HLPPE
Sbjct: 291 HLPPE 295


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TSHLPPEH 8
T+H P EH
Sbjct: 385 TAHQPNEH 392


>sp|Y534_METJA|UNCHARACTERIZED protein MJ0534|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TSHLPPEHSD 10
++H+ P+H++
Sbjct: 78 SNHISPDHNE 87


>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 1 TSHLPPEH 8
T+H P EH
Sbjct: 390 TAHQPNEH 397


>sp|PGMI_PYRAE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum aerophilum

Query: 1 TSHLPPEHSD 10
+ H+P EH +
Sbjct: 234 SPHIPKEHQE 243


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 2 SHLPPEHS 9
SH PPE++
Sbjct: 96 SHNPPEYN 103


>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain DSM

Query: 3 HLPPEH 8
LPPEH
Sbjct: 125 QLPPEH 130


>sp|SURE_METLZ|5'-NUCLEOTIDASE SurE|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 HLPPEHSD 10
++P EHSD
Sbjct: 221 YIPEEHSD 228


>sp|RSMA_METKA|PROBABLE ribosomal RNA small subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 HLPPE 7
HLPPE
Sbjct: 260 HLPPE 264


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TSHLPPEH 8
T +PPEH
Sbjct: 768 TLSVPPEH 775


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TSHLPPEH 8
T +PPEH
Sbjct: 768 TLSVPPEH 775




13|Sequence|61|70|PEHSDVVIVG

>sp|RS12_IGNH4|SMALL ribosomal subunit protein uS12|Ignicoccus hospitalis (strain KIN4/I

Query: 2 EHSDVVIVG 10
EH +VVIVG
Sbjct: 99 EHDEVVIVG 107


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 2 EHSDVVIV 9
EH+D++IV
Sbjct: 118 EHADIIIV 125


>sp|RS12_NANEQ|SMALL ribosomal subunit protein uS12|Nanoarchaeum equitans (strain

Query: 2 EHSDVVIVG 10
EH +V+IVG
Sbjct: 95 EHDEVLIVG 103


>sp|FPOB_METMA|F(420)H(2) dehydrogenase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PEHSDVVIV 9
P H+DV+I+
Sbjct: 87 PRHADVMII 95


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 SDVVIVG 10
SDVVIVG
Sbjct: 464 SDVVIVG 470


>sp|RS12_SULTO|SMALL ribosomal subunit protein uS12|Sulfurisphaera tokodaii (strain DSM

Query: 2 EHSDVVIVG 10
EH +VVI G
Sbjct: 99 EHDEVVIAG 107


>sp|RS12_SULAC|SMALL ribosomal subunit protein uS12|Sulfolobus acidocaldarius (strain

Query: 2 EHSDVVIVG 10
EH +VVI G
Sbjct: 99 EHDEVVIAG 107


>sp|GGGPS_NATPD|GERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EHSDVVIVG 10
+H+D VIVG
Sbjct: 204 QHADTVIVG 212


>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 EHSDVVIVG 10
+H DV++VG
Sbjct: 3 DHYDVIVVG 11


>sp|ILVC_METTP|KETOL-ACID reductoisomerase (NADP(+))|Methanothrix thermoacetophila (strain

Query: 1 PEHSDVVIVG 10
PE+ DVV+V
Sbjct: 120 PEYVDVVMVA 129


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 PEHSDVVIV 9
PE D+V+V
Sbjct: 575 PEEPDIVVV 583


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 PEHSDVVIV 9
PEH+DV+ V
Sbjct: 88 PEHADVIDV 96


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PEHSDVV 7
PE+SD+V
Sbjct: 388 PEYSDIV 394


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 PEHSDVVIV 9
PE S++V+V
Sbjct: 36 PEESEIVVV 44


>sp|RS12_SACS2|SMALL ribosomal subunit protein uS12|Saccharolobus solfataricus (strain

Query: 2 EHSDVVIVG 10
EH +V+I G
Sbjct: 99 EHDEVIITG 107


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PEHSDVV 7
PEH DV+
Sbjct: 608 PEHWDVI 614


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 1 PEHSDVV 7
PEH DV+
Sbjct: 608 PEHWDVI 614


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 1 PEHSDVV 7
PEH DV+
Sbjct: 608 PEHWDVI 614


>sp|THI4_SACI1|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 HSDVVIVG 10
SDVVIVG
Sbjct: 30 ESDVVIVG 37


>sp|THI4_SACI4|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 HSDVVIVG 10
SDVVIVG
Sbjct: 30 ESDVVIVG 37


>sp|THI4_SACS2|THIAMINE thiazole synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HSDVVIVG 10
SDVVIVG
Sbjct: 30 ESDVVIVG 37


>sp|THI4_SACI7|THIAMINE thiazole synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 HSDVVIVG 10
SDVVIVG
Sbjct: 30 ESDVVIVG 37


>sp|THI4_SACI6|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 HSDVVIVG 10
SDVVIVG
Sbjct: 30 ESDVVIVG 37


>sp|THI4_SACI3|THIAMINE thiazole synthase|Saccharolobus islandicus (strain M.16.27)

Query: 3 HSDVVIVG 10
SDVVIVG
Sbjct: 30 ESDVVIVG 37


>sp|THI4_SACI2|THIAMINE thiazole synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 HSDVVIVG 10
SDVVIVG
Sbjct: 30 ESDVVIVG 37


>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 2 EHSDVVIVG 10
E SDVV++G
Sbjct: 183 EASDVVVIG 191


>sp|THI4_SULTO|THIAMINE thiazole synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 HSDVVIVG 10
SDVVIVG
Sbjct: 33 ESDVVIVG 40


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PEHSDVVIVG 10
PE D+V+VG
Sbjct: 425 PETLDMVVVG 434


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 HSDVVIVG 10
H+D VI+G
Sbjct: 71 HTDAVIIG 78


>sp|RS12_THEPD|SMALL ribosomal subunit protein uS12|Thermofilum pendens (strain DSM 2475

Query: 2 EHSDVVIVG 10
EH +VVI G
Sbjct: 99 EHDEVVIEG 107


>sp|DPHB_SACI7|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 SDVVIVG 10
SD+VIVG
Sbjct: 201 SDIVIVG 207


>sp|DPHB_SACI6|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 SDVVIVG 10
SD+VIVG
Sbjct: 201 SDIVIVG 207


>sp|DPHB_SACI4|DIPHTHINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 SDVVIVG 10
SD+VIVG
Sbjct: 201 SDIVIVG 207


>sp|DPHB_SACI3|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 SDVVIVG 10
SD+VIVG
Sbjct: 201 SDIVIVG 207


>sp|DPHB_SACI2|DIPHTHINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 SDVVIVG 10
SD+VIVG
Sbjct: 201 SDIVIVG 207


>sp|DPHB_SACI1|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 SDVVIVG 10
SD+VIVG
Sbjct: 201 SDIVIVG 207


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PEHSDVVIV 9
P H+DVV V
Sbjct: 344 PLHADVVTV 352


>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PEHSDVVIVG 10
PE+ DV++V
Sbjct: 123 PEYVDVIMVA 132


>sp|SPEE_PYRAE|POLYAMINE aminopropyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PEHSDVVIVG 10
P SDV+I+G
Sbjct: 79 PRPSDVLILG 88


>sp|PELO_METBF|PROTEIN pelota homolog|Methanosarcina barkeri (strain Fusaro /

Query: 1 PEHSDVVIVG 10
PE + +VI G
Sbjct: 188 PEEASIVIAG 197


>sp|RS12_METKA|SMALL ribosomal subunit protein uS12|Methanopyrus kandleri (strain AV19 /

Query: 2 EHSDVVIVG 10
EH +VVI G
Sbjct: 99 EHDEVVIEG 107


>sp|RS12_AERPE|SMALL ribosomal subunit protein uS12|Aeropyrum pernix (strain ATCC 700893

Query: 2 EHSDVVIVG 10
EH +V+I G
Sbjct: 99 EHDEVIIEG 107


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 EHSDVVIVG 10
+H+D ++VG
Sbjct: 203 QHADTIVVG 211


>sp|IXTPA_PYRAE|DITP/XTP pyrophosphatase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EHSDVVIVG 10
+H DVV++
Sbjct: 38 QHDDVVVIA 46


>sp|ILVC_METKA|KETOL-ACID reductoisomerase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 1 PEHSDVVIVG 10
PE+ DV++V
Sbjct: 120 PEYVDVILVA 129


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PEHSDVVIVG 10
PE DVV +G
Sbjct: 417 PEQEDVVDMG 426


>sp|RS12_METMP|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain

Query: 2 EHSDVVIVG 10
EH +VVI G
Sbjct: 99 EHDEVVIEG 107


>sp|ILVC_PYRAB|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 1 PEHSDVVIVG 10
PE+ DV++V
Sbjct: 123 PEYVDVIMVA 132


>sp|RS12_METM7|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain C7

Query: 2 EHSDVVIVG 10
EH +VVI G
Sbjct: 99 EHDEVVIEG 107


>sp|Y690_METJA|UNCHARACTERIZED protein MJ0690|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PEHSDVVIVG 10
PEH +VG
Sbjct: 186 PEHKQTRVVG 195


>sp|RS12_METM5|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain C5

Query: 2 EHSDVVIVG 10
EH +VVI G
Sbjct: 99 EHDEVVIEG 107


>sp|RS12_METVS|SMALL ribosomal subunit protein uS12|Methanococcus vannielii (strain ATCC

Query: 2 EHSDVVIVG 10
EH +VVI G
Sbjct: 99 EHDEVVIEG 107




14|Sequence|66|75|VVIVGGGVLG

>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVIVGGGVLG 10
V+ VGGGVLG
Sbjct: 384 VIQVGGGVLG 393


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 VVIVGGGVLG 10
V+I+GGGV G
Sbjct: 143 VLIIGGGVAG 152


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VVIVGGGVLG 10
V IVGGG++G
Sbjct: 3 VAIVGGGIIG 12


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 VVIVGGGVLG 10
V+I+GGGV G
Sbjct: 143 VLIIGGGVAG 152


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 1 VVIVGGGVLG 10
VVIVGGG +G
Sbjct: 155 VVIVGGGYIG 164


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 1 VVIVGGGVLG 10
V+++GGG+ G
Sbjct: 148 VLVIGGGIAG 157


>sp|RS9_METTP|SMALL ribosomal subunit protein uS9|Methanothrix thermoacetophila

Query: 1 VVIVGGGVLG 10
V ++GGGV+G
Sbjct: 63 VSVMGGGVMG 72


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVIVGGGVLG 10
V+ GGGV+G
Sbjct: 363 VIQAGGGVMG 372


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 VVIVGGGVLG 10
V+ GGGV+G
Sbjct: 367 VIQAGGGVMG 376


>sp|HEM1_SACI7|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VVIVGGGVLG 10
+VIVG G +G
Sbjct: 186 IVIVGAGEMG 195


>sp|HEM1_SACI6|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VVIVGGGVLG 10
+VIVG G +G
Sbjct: 186 IVIVGAGEMG 195


>sp|HEM1_SACI4|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VVIVGGGVLG 10
+VIVG G +G
Sbjct: 186 IVIVGAGEMG 195


>sp|HEM1_SACI3|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VVIVGGGVLG 10
+VIVG G +G
Sbjct: 186 IVIVGAGEMG 195


>sp|HEM1_SACI2|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VVIVGGGVLG 10
+VIVG G +G
Sbjct: 186 IVIVGAGEMG 195


>sp|HEM1_SACI1|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VVIVGGGVLG 10
+VIVG G +G
Sbjct: 186 IVIVGAGEMG 195


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VVIVGGGVLG 10
V+I+GGG G
Sbjct: 8 VLIIGGGFAG 17


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VVIVGGGVLG 10
VV+VG G+ G
Sbjct: 7 VVVVGAGIAG 16


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVIVGGGVLG 10
++I+GGGV+
Sbjct: 161 ILIIGGGVVA 170


>sp|RS9_METJA|SMALL ribosomal subunit protein uS9|Methanocaldococcus jannaschii

Query: 1 VVIVGGGVLG 10
V + GGGV+G
Sbjct: 65 VTVKGGGVMG 74


>sp|RS9_SACS2|SMALL ribosomal subunit protein uS9|Saccharolobus solfataricus (strain

Query: 1 VVIVGGGVLG 10
++ GGG++G
Sbjct: 68 IITYGGGIMG 77


>sp|Y1314_ARCFU|UNCHARACTERIZED protein AF_1314|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VIVGGGVLG 10
VIVGGG G
Sbjct: 3 VIVGGGKYG 11


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VVIVGGGVLG 10
VV+VG G+ G
Sbjct: 7 VVVVGSGIAG 16


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVIVGGGVLG 10
VVI+GGG +G
Sbjct: 8 VVIIGGGPVG 17


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VVIVGGGVLG 10
V+ GGGV+G
Sbjct: 368 VIQAGGGVMG 377


>sp|THI4_HALSA|THIAMINE thiazole synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VVIVGGGVLG 10
V+IVGGG G
Sbjct: 34 VIIVGGGPSG 43


>sp|THI4_HALS3|THIAMINE thiazole synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VVIVGGGVLG 10
V+IVGGG G
Sbjct: 34 VIIVGGGPSG 43


>sp|PC2DH_METBF|PRECORRIN-2 dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VVIVGGGVLG 10
+VI GGG +G
Sbjct: 19 IVIFGGGSVG 28


>sp|RS9_SULTO|SMALL ribosomal subunit protein uS9|Sulfurisphaera tokodaii (strain DSM

Query: 1 VVIVGGGVLG 10
+ + GGGV+G
Sbjct: 68 IYVEGGGVMG 77


>sp|RS9_HALMA|SMALL ribosomal subunit protein uS9|Haloarcula marismortui (strain ATCC

Query: 1 VVIVGGGVLG 10
V + GGGV+G
Sbjct: 63 VSVEGGGVMG 72


>sp|PIMT1_ARCFU|PROTEIN-L-ISOASPARTATE O-methyltransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVIVGGGVLG 10
VVIVG G LG
Sbjct: 130 VVIVGDGSLG 139


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 2 VIVGGGVLG 10
+++GGGV G
Sbjct: 155 LVIGGGVAG 163


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 1 VVIVGGGVL 9
+++ GGGVL
Sbjct: 207 IILAGGGVL 215


>sp|RL18E_THEKO|LARGE ribosomal subunit protein eL18|Thermococcus kodakarensis (strain

Query: 1 VVIVGGGVLG 10
VVIV G VLG
Sbjct: 62 VVIVPGSVLG 71


>sp|THI4_HALMA|THIAMINE thiazole synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VVIVGGGVLG 10
V+IVGGG G
Sbjct: 38 VIIVGGGPSG 47


>sp|RS9_METST|SMALL ribosomal subunit protein uS9|Methanosphaera stadtmanae (strain

Query: 1 VVIVGGGVLG 10
V +VGGG++G
Sbjct: 64 VRVVGGGIMG 73


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 2 VIVGGGVLG 10
+++GGGV G
Sbjct: 156 LVIGGGVAG 164


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 VIVGGGVLG 10
+++GGGV G
Sbjct: 149 LVIGGGVSG 157


>sp|DCDB_METM7|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C7 /

Query: 3 IVGGGVLG 10
IV GG+LG
Sbjct: 91 IVSGGLLG 98


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 2 VIVGGGVLG 10
+++GGG+ G
Sbjct: 146 LVIGGGIAG 154


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 VVIVGGG 7
VVIVGGG
Sbjct: 566 VVIVGGG 572


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 GGGVLG 10
GGG+LG
Sbjct: 425 GGGILG 430


>sp|THI4_NATPD|THIAMINE thiazole synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VVIVGGGVLG 10
V+IVGGG G
Sbjct: 35 VIIVGGGPSG 44


>sp|RS9_AERPE|SMALL ribosomal subunit protein uS9|Aeropyrum pernix (strain ATCC

Query: 1 VVIVGGGVLG 10
V + GGGV+G
Sbjct: 67 VRVEGGGVMG 76


>sp|RL18E_SULTO|LARGE ribosomal subunit protein eL18|Sulfurisphaera tokodaii (strain

Query: 1 VVIVGGGVLG 10
VV+V G VLG
Sbjct: 58 VVVVPGKVLG 67


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 1 VVIVGGGVLG 10
VV++GGG G
Sbjct: 6 VVVIGGGAAG 15


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 IVGGGVLG 10
++G G+LG
Sbjct: 443 VIGAGILG 450


>sp|DCDB_META3|DCTP deaminase, dUMP-forming|Methanococcus aeolicus (strain ATCC

Query: 2 VIVGGGVLG 10
V+V GG+LG
Sbjct: 90 VVVKGGLLG 98


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 3 IVGGGV 8
IVGGGV
Sbjct: 630 IVGGGV 635


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VVIVGGGV 8
+VIVGGG+
Sbjct: 195 MVIVGGGI 202


>sp|THI4_HALWD|THIAMINE thiazole synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VVIVGGGVLG 10
V+IVGGG G
Sbjct: 34 VIIVGGGPSG 43


>sp|PIMT_METJA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VVIVGGGVLG 10
+VIVG G LG
Sbjct: 131 IVIVGDGTLG 140


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 VVIVGGGVL 9
V++ GGGV+
Sbjct: 207 VILAGGGVI 215


>sp|GGGPS_PICTO|GERANYLGERANYLGLYCERYL phosphate synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 VIVGGGV 8
VIVGGG+
Sbjct: 197 VIVGGGI 203


>sp|RL18E_SACS2|LARGE ribosomal subunit protein eL18|Saccharolobus solfataricus (strain

Query: 1 VVIVGGGVLG 10
+V+V G VLG
Sbjct: 57 IVVVPGKVLG 66


>sp|UGNO_METMP|UDP-N-ACETYLGLUCOSAMINE 3-dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VVIVGGGVLG 10
V +VG GV+G
Sbjct: 4 VAVVGIGVMG 13


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 2 VIVGGGVLG 10
V+VG GVLG
Sbjct: 14 VVVGHGVLG 22


>sp|APGM_THEGJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus gammatolerans (strain DSM

Query: 1 VVIVGGGV 8
++IVGGGV
Sbjct: 362 LLIVGGGV 369


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VVIVGGGVLG 10
+VI+GGG +G
Sbjct: 1 MVIIGGGPIG 10


>sp|DCDB_METVS|DCTP deaminase, dUMP-forming|Methanococcus vannielii (strain ATCC

Query: 3 IVGGGVLG 10
+V GG+LG
Sbjct: 91 VVSGGLLG 98


>sp|DCDB_METMP|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain DSM

Query: 3 IVGGGVLG 10
+V GG+LG
Sbjct: 91 VVSGGLLG 98


>sp|DCDB_METM6|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C6 /

Query: 3 IVGGGVLG 10
+V GG+LG
Sbjct: 91 VVSGGLLG 98


>sp|DCDB_METM5|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C5 /

Query: 3 IVGGGVLG 10
+V GG+LG
Sbjct: 91 VVSGGLLG 98


>sp|DLDH_HALSA|DIHYDROLIPOYL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VVIVGGGVLG 10
+VIVGGG +G
Sbjct: 182 MVIVGGGYIG 191


>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 2 VIVGGGVL 9
++VGGGVL
Sbjct: 14 IVVGGGVL 21


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 3 IVGGGVLG 10
+VGG +LG
Sbjct: 127 VVGGDILG 134


>sp|Y1602_METBF|UNCHARACTERIZED protein Mbar_A1602|Methanosarcina barkeri (strain Fusaro /

Query: 1 VVIVGGGVLG 10
VVI+G G G
Sbjct: 9 VVIIGAGPAG 18


>sp|GGGPS_METS3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VVIVGGGV 8
V+IVGGG+
Sbjct: 197 VIIVGGGI 204




15|Sequence|71|80|GGVLGLSVAY

>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GGVLGLSVAY 10
GG++GL AY
Sbjct: 8 GGIIGLFTAY 17


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 2 GVLGLSVAY 10
G LG+ +AY
Sbjct: 349 GFLGIGIAY 357


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GGVLGLS 7
GG+LGL+
Sbjct: 426 GGILGLA 432




16|Sequence|76|85|LSVAYWLKKL

>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 3 VAYWLKKL 10
VAYW+K++
Sbjct: 63 VAYWIKQM 70


>sp|RS2_HALWD|SMALL ribosomal subunit protein uS2|Haloquadratum walsbyi (strain DSM

Query: 1 LSVAYWL 7
LSV YWL
Sbjct: 249 LSVVYWL 255


>sp|RS2_HALSA|SMALL ribosomal subunit protein uS2|Halobacterium salinarum (strain ATCC

Query: 1 LSVAYWL 7
LSV YWL
Sbjct: 219 LSVVYWL 225


>sp|RS2_HALS3|SMALL ribosomal subunit protein uS2|Halobacterium salinarum (strain ATCC

Query: 1 LSVAYWL 7
LSV YWL
Sbjct: 219 LSVVYWL 225


>sp|RS2_HALMA|SMALL ribosomal subunit protein uS2|Haloarcula marismortui (strain ATCC

Query: 1 LSVAYWL 7
LSV YWL
Sbjct: 237 LSVVYWL 243


>sp|RS2_NATPD|SMALL ribosomal subunit protein uS2|Natronomonas pharaonis (strain ATCC

Query: 1 LSVAYWL 7
LSV YWL
Sbjct: 247 LSVIYWL 253


>sp|DHE4_PYRCJ|NADP(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 AYWLKKL 10
AYWL+K+
Sbjct: 227 AYWLEKM 233


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 AYWLKKL 10
AYWL+K+
Sbjct: 230 AYWLEKM 236


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SVAYWLKK 9
S+ YW+KK
Sbjct: 604 SLEYWMKK 611


>sp|FTSY_SULAC|SIGNAL recognition particle receptor FtsY|Sulfolobus acidocaldarius

Query: 1 LSVAYWLKK 9
LS+AY LKK
Sbjct: 332 LSLAYELKK 340


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 YWLKKL 10
YW+K+L
Sbjct: 88 YWIKRL 93


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 3 VAYWLKKL 10
VA W+KK+
Sbjct: 51 VAAWVKKI 58




17|Sequence|81|90|WLKKLESRRG

>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 LKKLESRRG 10
LKKLE+ RG
Sbjct: 765 LKKLEAERG 773


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 LKKLESRR 9
+KK+ESRR
Sbjct: 519 IKKIESRR 526


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 LKKLESRRG 10
+KKLE+ RG
Sbjct: 764 MKKLEAERG 772


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LKKLESRR 9
+KK ESRR
Sbjct: 1 MKKYESRR 8


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WLKKLESRR 9
+L+KLESR+
Sbjct: 283 FLEKLESRK 291


>sp|Y3527_METJA|UNCHARACTERIZED protein MJECL27|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKKLESRR 9
LKKLES++
Sbjct: 58 LKKLESQK 65


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WLKKLESRR 9
+L+KLESR+
Sbjct: 283 FLEKLESRK 291


>sp|CCA_METBF|CCA-ADDING enzyme|Methanosarcina barkeri (strain Fusaro /

Query: 2 LKKLESRR 9
L+KLESR+
Sbjct: 284 LEKLESRK 291


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 2 LKKLESR 8
LKKLESR
Sbjct: 273 LKKLESR 279


>sp|RPO3_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LKKLESRRG 10
LKKL +RG
Sbjct: 173 LKKLAKKRG 181


>sp|SPEH_PYRFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WLKKLESRRG 10
W +KL+ R G
Sbjct: 128 WEEKLDRRNG 137


>sp|Y080_METJA|UNCHARACTERIZED transcriptional regulator MJ0080|Methanocaldococcus jannaschii

Query: 1 WLKKLESRRG 10
WL ++ES+ G
Sbjct: 44 WLSRIESKIG 53


>sp|SPEH_PYRAB|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 WLKKLESRRG 10
W +KL+ R G
Sbjct: 128 WEEKLDRRNG 137


>sp|RPO3_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus abyssi (strain GE5 /

Query: 2 LKKLESRRG 10
LKKL +RG
Sbjct: 171 LKKLAKKRG 179


>sp|Y939_AERPE|UPF0248 protein APE_0939|Aeropyrum pernix (strain ATCC 700893

Query: 1 WLKKLESRR 9
WL+ L SRR
Sbjct: 88 WLEDLSSRR 96




18|Sequence|86|95|ESRRGAIRVL

>sp|DPHB_METAC|DIPHTHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ESRRGAI 7
ESRRGAI
Sbjct: 139 ESRRGAI 145


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ESRRGAIRV 9
E+RRG++R+
Sbjct: 384 EARRGSLRI 392


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 4 RGAIRVL 10
RGAIR+L
Sbjct: 390 RGAIRIL 396


>sp|FLAB3_METJA|FLAGELLIN B3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESRRGAIRV 9
+SRRGAI +
Sbjct: 7 KSRRGAIGI 15


>sp|G3PP_METKA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 ESRRGAIRVL 10
E+RR AIR +
Sbjct: 22 EARRNAIRAM 31


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 SRRGAIRV 9
SR+GA+R+
Sbjct: 254 SRQGAVRI 261


Query: 3 RRGAIRVL 10
RRG +RVL
Sbjct: 330 RRGVLRVL 337


>sp|TRPA_AERPE|TRYPTOPHAN synthase alpha chain|Aeropyrum pernix (strain ATCC 700893

Query: 2 SRRGAIRVL 10
SR+GA+ VL
Sbjct: 105 SRKGALSVL 113


>sp|MOAE_HALVD|PROBABLE molybdopterin synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 ESRRGAIRVL 10
E+R G +RVL
Sbjct: 192 EARDGVLRVL 201




19|Sequence|91|100|AIRVLVVERD

>sp|Y738_METTH|UNCHARACTERIZED protein MTH_738|Methanothermobacter thermautotrophicus (strain

Query: 1 AIRVLVVERD 10
A RV+ +ERD
Sbjct: 52 ADRVIAIERD 61


>sp|PYRH_THEAC|URIDYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IRVLVVERD 10
IRV+V RD
Sbjct: 197 IRVIVTSRD 205


>sp|CBID_METMJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 IRVLVVERD 10
+RV++V+RD
Sbjct: 321 VRVVIVDRD 329


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RVLVVERD 10
RV+VV+RD
Sbjct: 384 RVIVVDRD 391




20|Sequence|96|105|VVERDHTYSQ

>sp|DMRX_METJA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VVERDHTYS 9
++ER+H YS
Sbjct: 75 ILEREHPYS 83


>sp|SRP19_HALMA|SIGNAL recognition particle 19 kDa|Haloarcula marismortui (strain ATCC

Query: 1 VVERDHTYSQ 10
V+ERD TY +
Sbjct: 49 VIERDKTYPR 58


>sp|SRP19_HALLT|SIGNAL recognition particle 19 kDa|Halorubrum lacusprofundi (strain ATCC

Query: 1 VVERDHTYSQ 10
V+ER+ TYS+
Sbjct: 49 VIEREKTYSR 58


>sp|SRP19_HALVD|SIGNAL recognition particle 19 kDa|Haloferax volcanii (strain ATCC 29605

Query: 1 VVERDHTYSQ 10
V+ERD YS+
Sbjct: 49 VIERDKRYSR 58


>sp|GGGPS_SULAC|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VVERDH 6
V+ERDH
Sbjct: 231 VIERDH 236


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DHTYSQ 10
DH YSQ
Sbjct: 171 DHVYSQ 176




21|Sequence|101|110|HTYSQASTGL

>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HTYSQASTGL 10
H Y AS+G+
Sbjct: 303 HVYKGASSGM 312


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 HTYSQASTGL 10
+TY+ +TGL
Sbjct: 142 YTYATCTTGL 151


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 HTYSQASTGL 10
+TY+ +TGL
Sbjct: 142 YTYATCTTGL 151




22|Sequence|106|115|ASTGLSVGGI

>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 1 ASTGLSVGGI 10
A+TGLS+ G+
Sbjct: 239 AATGLSIAGL 248


>sp|HIS2_PYRIL|PHOSPHORIBOSYL-ATP pyrophosphatase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 STGLSVGGI 10
STGLS+G +
Sbjct: 77 STGLSLGDV 85


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ASTGLSVGG 9
AS+G+ VGG
Sbjct: 520 ASSGMLVGG 528


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 ASTGLSVGG 9
AS+G+ VGG
Sbjct: 517 ASSGMLVGG 525


>sp|ARGC_METM5|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C5 /

Query: 4 GLSVGGI 10
GLSVGG+
Sbjct: 335 GLSVGGM 341


>sp|MTRC_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanosarcina acetivorans (strain

Query: 1 ASTGLSVGGI 10
A GLSVGGI
Sbjct: 87 ALFGLSVGGI 96


>sp|CDC61_AERPE|ORC1-TYPE DNA replication protein 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 TGLSVGGI 10
TGLSVG +
Sbjct: 118 TGLSVGEV 125


>sp|RL34_PYRNV|LARGE ribosomal subunit protein eL34|Pyrobaculum neutrophilum (strain

Query: 3 TGLSVGGI 10
TGL++GG+
Sbjct: 40 TGLAIGGM 47


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 1 ASTGLSVGGI 10
A+ GLS GG+
Sbjct: 20 AAVGLSGGGL 29


>sp|ARGC_METM6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C6 /

Query: 4 GLSVGGI 10
GLSVGG+
Sbjct: 335 GLSVGGM 341


>sp|Y1902_METTH|UPF0173 metal-dependent hydrolase MTH_1902|Methanothermobacter

Query: 2 STGLSVGG 9
STG+++GG
Sbjct: 85 STGMNIGG 92


>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 4 GLSVGGI 10
GLSVGG+
Sbjct: 335 GLSVGGM 341




23|Sequence|111|120|SVGGICQQFS

>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 SVGGICQQFS 10
SVGG+C FS
Sbjct: 204 SVGGVCFTFS 213




24|Sequence|116|125|CQQFSLPENI

>sp|Y1350_METJA|UNCHARACTERIZED protein MJ1350|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CQQFSLPENI 10
C+ F+LPE++
Sbjct: 223 CKWFNLPEDV 232


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 1 CQQFSLP 7
C++FSLP
Sbjct: 547 CRKFSLP 553


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FSLPENI 10
FS+PEN+
Sbjct: 169 FSIPENV 175


>sp|SPEE_SACS2|POLYAMINE aminopropyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 4 FSLPENI 10
FSLP+NI
Sbjct: 274 FSLPKNI 280


>sp|SPEE_SACI7|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 FSLPENI 10
FSLP+NI
Sbjct: 274 FSLPKNI 280


>sp|SPEE_SACI6|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 FSLPENI 10
FSLP+NI
Sbjct: 274 FSLPKNI 280


>sp|SPEE_SACI4|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 FSLPENI 10
FSLP+NI
Sbjct: 274 FSLPKNI 280


>sp|SPEE_SACI3|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 4 FSLPENI 10
FSLP+NI
Sbjct: 274 FSLPKNI 280


>sp|SPEE_SACI2|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 FSLPENI 10
FSLP+NI
Sbjct: 274 FSLPKNI 280


>sp|SPEE_SACI1|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 FSLPENI 10
FSLP+NI
Sbjct: 274 FSLPKNI 280


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QQFSLPENI 10
Q+F LP N+
Sbjct: 709 QEFELPNNL 717


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QQFSLPENI 10
+ ++LPENI
Sbjct: 468 KDYNLPENI 476


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 QQFSLPE 8
Q+FS+PE
Sbjct: 455 QEFSIPE 461


>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 1 CQQFSLPENI 10
C++F + EN+
Sbjct: 118 CERFGVRENV 127


>sp|Y076_METJA|UNCHARACTERIZED protein MJ0076|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CQQFSLPENI 10
QQF + EN+
Sbjct: 94 AQQFRIEENV 103




25|Sequence|121|130|LPENIQLSLF

>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 2 PENIQLSLF 10
PENI+ SL+
Sbjct: 265 PENIEKSLY 273


>sp|RS3_METST|SMALL ribosomal subunit protein uS3|Methanosphaera stadtmanae (strain

Query: 1 LPENIQLS 8
LP+NI++S
Sbjct: 188 LPDNIEIS 195


>sp|RL6_METJA|LARGE ribosomal subunit protein uL6|Methanocaldococcus jannaschii

Query: 1 LPENIQLSL 9
+PEN+Q+ +
Sbjct: 13 IPENVQVEI 21


>sp|ENDA_METMA|TRNA-SPLICING endonuclease|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PENIQLSL 9
PE +QLSL
Sbjct: 214 PERLQLSL 221


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PENIQLSL 9
PE +QLSL
Sbjct: 211 PERLQLSL 218


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LPENIQLSLF 10
LP+N Q+S +
Sbjct: 95 LPKNFQISQY 104


>sp|DNAG_PYRAE|DNA primase DnaG|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LPENIQLSLF 10
+PEN+Q+ F
Sbjct: 392 VPENMQILTF 401




26|Sequence|126|135|QLSLFSASFL

>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LSLFSASFL 10
LSLFSA L
Sbjct: 109 LSLFSAGLL 117




27|Sequence|131|140|SASFLRNINE

>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ASFLRNINE 10
AS +RN+NE
Sbjct: 260 ASEIRNVNE 268


>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 1 SASFLRNINE 10
+A FL+NI++
Sbjct: 234 AAGFLKNISQ 243


>sp|PELO_PICTO|PROTEIN pelota homolog|Picrophilus torridus (strain ATCC 700027

Query: 3 SFLRNIN 9
+FLRN+N
Sbjct: 258 TFLRNLN 264




28|Sequence|136|145|RNINEYLAVV

>sp|ACKA_METBF|ACETATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RNINEYLAVV 10
R I EYLAV+
Sbjct: 311 RVIGEYLAVL 320


>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RNINEYL 7
RN+NE+L
Sbjct: 264 RNVNEFL 270


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 1 RNINEYLAV 9
RNI EYL V
Sbjct: 182 RNILEYLDV 190


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 1 RNINEYLAV 9
RNI EYL V
Sbjct: 182 RNILEYLDV 190


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 1 RNINEYLAV 9
RNI EYL V
Sbjct: 182 RNILEYLDV 190


>sp|BPSA_THEKO|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RNINEYL 7
RN NEY+
Sbjct: 285 RNFNEYV 291


>sp|PDXS_THEVO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma volcanium (strain

Query: 1 RNINEYLAVV 10
R +NE +A+V
Sbjct: 171 RKVNEEIAIV 180


>sp|PYRDB_SULAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Sulfolobus acidocaldarius

Query: 2 NINEYLAVV 10
N+NEY+ V
Sbjct: 97 NVNEYIDAV 105




29|Sequence|141|150|YLAVVDAPPL

>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 3 AVVDAPPL 10
A+VD PP+
Sbjct: 432 AIVDEPPI 439


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 3 AVVDAPPL 10
A+VD PP+
Sbjct: 421 AIVDEPPV 428


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LAVVDAPP 9
L ++D PP
Sbjct: 165 LGIIDGPP 172


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain ATCC

Query: 2 LAVVDAPPL 10
+ V+DAPP+
Sbjct: 93 VTVLDAPPI 101


>sp|RL3_PYRIL|LARGE ribosomal subunit protein uL3|Pyrobaculum islandicum (strain DSM

Query: 2 LAVVDAPPL 10
+ V+DAPPL
Sbjct: 78 VTVLDAPPL 86


>sp|RL3_PYRNV|LARGE ribosomal subunit protein uL3|Pyrobaculum neutrophilum (strain

Query: 2 LAVVDAPPL 10
+ V+DAPPL
Sbjct: 74 VTVLDAPPL 82


>sp|RL3_PYRAE|LARGE ribosomal subunit protein uL3|Pyrobaculum aerophilum (strain ATCC

Query: 2 LAVVDAPPL 10
+ V+DAPPL
Sbjct: 74 VTVLDAPPL 82


>sp|RL3_PYRAR|LARGE ribosomal subunit protein uL3|Pyrobaculum arsenaticum (strain DSM

Query: 2 LAVVDAPPL 10
+ V+DAPPL
Sbjct: 74 VTVLDAPPL 82


>sp|RL3_PYRCJ|LARGE ribosomal subunit protein uL3|Pyrobaculum calidifontis (strain

Query: 2 LAVVDAPPL 10
+ V+DAPPL
Sbjct: 74 VTVLDAPPL 82


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 3 AVVDAPPL 10
A+VD+PP+
Sbjct: 421 AIVDSPPV 428


>sp|RL3_METKA|LARGE ribosomal subunit protein uL3|Methanopyrus kandleri (strain AV19

Query: 2 LAVVDAPPL 10
+ ++DAPP+
Sbjct: 76 VTILDAPPM 84


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 YLAVVDAP 8
YL V DAP
Sbjct: 534 YLVVPDAP 541




30|Sequence|146|155|DAPPLDLRFN

>sp|PANE_PYRAB|2-DEHYDROPANTOATE 2-reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 DAPPLDLRF 9
D PP+DL F
Sbjct: 229 DVPPMDLFF 237


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 APPLDLR 8
APPLDL+
Sbjct: 110 APPLDLK 116


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 2 APPLDLR 8
APPLDL+
Sbjct: 110 APPLDLK 116


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 APPLDLR 8
APPLDL+
Sbjct: 110 APPLDLK 116


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 APPLDLR 8
APPLDL+
Sbjct: 110 APPLDLK 116


>sp|MFNA_METHJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanospirillum hungatei JF-1

Query: 1 DAPPLDL 7
DAPP D
Sbjct: 204 DAPPFDF 210


>sp|NADE_HALSA|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PLDLRFN 10
PLDLRF+
Sbjct: 9 PLDLRFS 15


>sp|NADE_HALS3|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 4 PLDLRFN 10
PLDLRF+
Sbjct: 9 PLDLRFS 15


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 APPLDL 7
APPLDL
Sbjct: 110 APPLDL 115


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 1 DAPPLDL 7
DAPPL L
Sbjct: 546 DAPPLSL 552


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DAPPLD 6
DAPP+D
Sbjct: 469 DAPPVD 474


>sp|Y182_AERPE|UPF0235 protein APE_0182.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 DAPPLDLRFN 10
D PPL+ R N
Sbjct: 46 DEPPLEGRAN 55




31|Sequence|151|160|DLRFNPSGYL

>sp|GGR2_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 RFNPSGYL 10
RF PSGYL
Sbjct: 198 RFAPSGYL 205


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 3 RFNPSGYL 10
RF PSG++
Sbjct: 278 RFEPSGFI 285


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 3 RFNPSGYL 10
RF PSG++
Sbjct: 278 RFEPSGFI 285


>sp|SRP54_HALLT|SIGNAL recognition particle 54 kDa|Halorubrum lacusprofundi (strain ATCC

Query: 3 RFNPSGYL 10
RF PSG++
Sbjct: 278 RFEPSGFI 285


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RFNPSGYL 10
+FNP GY+
Sbjct: 636 KFNPFGYI 643


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 3 RFNPSGYL 10
RF+P+G++
Sbjct: 278 RFDPNGFI 285


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 RFNPSGYL 10
RF+P+ YL
Sbjct: 270 RFDPNSYL 277


>sp|SRP54_ARCFU|SIGNAL recognition particle 54 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 3 RFNPSGYL 10
RF+P+G++
Sbjct: 274 RFDPAGFV 281


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 3 RFNPSGYL 10
RF+P+ YL
Sbjct: 264 RFDPNSYL 271


>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 3 RFNPSGYL 10
RF+P G++
Sbjct: 278 RFDPDGFI 285


>sp|Y1671_PYRHO|UPF0173 metal-dependent hydrolase PH1671|Pyrococcus horikoshii (strain ATCC

Query: 5 NPSGYL 10
NPSGY+
Sbjct: 121 NPSGYI 126


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FNPSGYL 10
+ PSGYL
Sbjct: 529 YGPSGYL 535


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DLRFNPSGYL 10
DL+ N +GYL
Sbjct: 300 DLKENAAGYL 309


>sp|SRP54_HALWD|SIGNAL recognition particle 54 kDa|Haloquadratum walsbyi (strain DSM 16790

Query: 3 RFNPSGYL 10
RF P+G++
Sbjct: 278 RFEPNGFI 285


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 3 RFNPSGYL 10
RF P+G++
Sbjct: 278 RFEPNGFI 285


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 DLRFNPSGYL 10
D+RFN G++
Sbjct: 702 DVRFNRGGFI 711


>sp|DPCKG_METVS|GTP-DEPENDENT dephospho-CoA kinase|Methanococcus vannielii (strain ATCC 35089

Query: 4 FNPSGYL 10
+NP GY+
Sbjct: 76 YNPPGYI 82


>sp|DPCKG_PYRIL|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 FNPSGYL 10
+NP GY+
Sbjct: 90 YNPPGYI 96


>sp|RS13_STAMF|SMALL ribosomal subunit protein uS13|Staphylothermus marinus (strain

Query: 1 DLRFNPSGY 9
DL NPS Y
Sbjct: 67 DLLSNPSAY 75


>sp|Y452_PYRAB|UNCHARACTERIZED lipoprotein PYRAB04520|Pyrococcus abyssi (strain GE5 /

Query: 1 DLRFNPSGYL 10
DL FN YL
Sbjct: 49 DLSFNDMAYL 58


>sp|Y1714_PYRHO|UNCHARACTERIZED lipoprotein PH1714|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DLRFNPSGYL 10
DL FN YL
Sbjct: 50 DLSFNDMAYL 59


>sp|Y1695_PYRFU|UNCHARACTERIZED lipoprotein PF1695|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLRFNPSGYL 10
DL FN YL
Sbjct: 46 DLSFNDMAYL 55


>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 2 LRFNPSG 8
+RFNP G
Sbjct: 657 IRFNPVG 663


>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 3 RFNPSGY 9
RFN +GY
Sbjct: 557 RFNANGY 563




32|Sequence|156|165|PSGYLLLASE

>sp|GUAAA_SULAC|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfolobus

Query: 1 PSGYLLLAS 9
PSG+ +LAS
Sbjct: 136 PSGFRILAS 144


>sp|GUAAA_METB6|GMP synthase [glutamine-hydrolyzing] subunit A|Methanoregula boonei

Query: 1 PSGYLLLAS 9
P G+ LLAS
Sbjct: 132 PEGFTLLAS 140


>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 1 PSGYLLLAS 9
PSG+ +LAS
Sbjct: 136 PSGFRVLAS 144


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 2 SGYLLLA 8
+GYLLLA
Sbjct: 175 NGYLLLA 181




33|Sequence|161|170|LLASEKDAAA

***** No hits found ******


34|Sequence|166|175|KDAAAMESNV

***** No hits found ******


35|Sequence|171|180|MESNVKVQRQ

>sp|Y1496_PYRFU|UPF0252 protein PF1496|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MESNVKVQR 9
ME+ V+VQR
Sbjct: 176 MEAGVEVQR 184




36|Sequence|176|185|KVQRQEGAKV

>sp|PYRE_METMP|OROTATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 VQRQEGAK 9
V RQEGAK
Sbjct: 155 VDRQEGAK 162


>sp|PYRE_HALWD|OROTATE phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VQRQEGAK 9
V RQEGA+
Sbjct: 149 VDRQEGAR 156


>sp|PYRE_METAC|OROTATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 VQRQEGAK 9
V R+EGAK
Sbjct: 159 VDREEGAK 166


>sp|PYRE_PYRFU|OROTATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VQRQEGAK 9
V R+EGAK
Sbjct: 147 VDREEGAK 154




37|Sequence|181|190|EGAKVSLMSP

>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 2 GAKVSLMSP 10
GAK+ L+SP
Sbjct: 181 GAKIHLISP 189


>sp|IF5A_METS5|TRANSLATION initiation factor 5A|Metallosphaera sedula (strain ATCC 51363

Query: 2 GAKVSLMSP 10
GAK +LM+P
Sbjct: 52 GAKKTLMAP 60


>sp|IF5A_SACS2|TRANSLATION initiation factor 5A|Saccharolobus solfataricus (strain ATCC

Query: 2 GAKVSLMSP 10
GAK +LM+P
Sbjct: 52 GAKKTLMAP 60


>sp|PYRB_METBF|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina barkeri

Query: 2 GAKVSLMSP 10
GA+++L+SP
Sbjct: 180 GAEITLVSP 188


>sp|PYRB_METBU|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcoides burtonii

Query: 2 GAKVSLMSP 10
GA+++L+SP
Sbjct: 180 GAEITLVSP 188


>sp|RS3_THESM|SMALL ribosomal subunit protein uS3|Thermococcus sibiricus (strain DSM

Query: 2 GAKVSLMSP 10
G KVS+M P
Sbjct: 177 GVKVSIMPP 185


>sp|RS3_THEKO|SMALL ribosomal subunit protein uS3|Thermococcus kodakarensis (strain

Query: 2 GAKVSLMSP 10
G KVS+M P
Sbjct: 177 GVKVSIMPP 185


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 1 EGAKVSLMS 9
EG K+ LMS
Sbjct: 560 EGVKMKLMS 568


>sp|RS3_THEON|SMALL ribosomal subunit protein uS3|Thermococcus onnurineus (strain NA1)

Query: 2 GAKVSLMSP 10
G KVS+M P
Sbjct: 177 GVKVSIMPP 185


>sp|IF5A_SACI2|TRANSLATION initiation factor 5A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GAKVSLMSP 10
GAK +LM+P
Sbjct: 52 GAKKTLMAP 60


>sp|IF5A_SACI7|TRANSLATION initiation factor 5A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GAKVSLMSP 10
GAK +LM+P
Sbjct: 52 GAKKTLMAP 60


>sp|IF5A_SACI6|TRANSLATION initiation factor 5A|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GAKVSLMSP 10
GAK +LM+P
Sbjct: 52 GAKKTLMAP 60


>sp|IF5A_SACI4|TRANSLATION initiation factor 5A|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GAKVSLMSP 10
GAK +LM+P
Sbjct: 52 GAKKTLMAP 60


>sp|IF5A_SACI3|TRANSLATION initiation factor 5A|Saccharolobus islandicus (strain M.16.27)

Query: 2 GAKVSLMSP 10
GAK +LM+P
Sbjct: 52 GAKKTLMAP 60


>sp|IF5A_SACI1|TRANSLATION initiation factor 5A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GAKVSLMSP 10
GAK +LM+P
Sbjct: 52 GAKKTLMAP 60




38|Sequence|186|195|SLMSPDQLRN

>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 2 LMSPDQLRN 10
++SPD+LRN
Sbjct: 141 MVSPDELRN 149


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LMSPDQLRN 10
+M+PD++RN
Sbjct: 678 VMNPDRVRN 686


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 2 LMSPDQLRN 10
+M+PD++RN
Sbjct: 685 VMNPDRVRN 693


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 SPDQLR 9
SPDQLR
Sbjct: 281 SPDQLR 286


>sp|MTAA_METBA|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri

Query: 2 LMSPDQLR 9
LMSPD R
Sbjct: 209 LMSPDTFR 216


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 2 LMSPDQLR 9
L+SP+Q+R
Sbjct: 17 LLSPEQIR 24


>sp|NADC_METTH|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 3 MSPDQLRN 10
MSP+ +RN
Sbjct: 212 MSPETIRN 219


>sp|SYD_THEAC|ASPARTATE--TRNA(ASP) ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 SPDQLR 9
SPDQLR
Sbjct: 301 SPDQLR 306


>sp|MOAA_METVS|PROBABLE GTP 3',8-cyclase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LMSPDQL 8
LMSPD++
Sbjct: 39 LMSPDEI 45


>sp|THSA_HALSA|THERMOSOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 SLMSPDQLRN 10
++ PDQL+N
Sbjct: 255 NVTDPDQLQN 264


>sp|PYRB_METMP|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 2 LMSPDQLR 9
L+SPD+L+
Sbjct: 183 LISPDELK 190


>sp|PURP_CENSY|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Cenarchaeum symbiosum (strain A)

Query: 3 MSPDQLRN 10
MSPDQ+ +
Sbjct: 82 MSPDQIES 89


>sp|PYRB_METM6|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 2 LMSPDQLR 9
L+SPD+L+
Sbjct: 183 LISPDELK 190


>sp|PYRB_METVS|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus vannielii

Query: 2 LMSPDQLR 9
L+SPD+L+
Sbjct: 183 LISPDELK 190




39|Sequence|191|200|DQLRNKFPWI

>sp|RL18_METKA|LARGE ribosomal subunit protein uL18|Methanopyrus kandleri (strain AV19

Query: 2 QLRNKFPW 9
+LRNKF W
Sbjct: 69 ELRNKFGW 76


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 DQLRNKFPW 9
+ L N+FPW
Sbjct: 42 NSLLNEFPW 50


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 3 LRNKFPWI 10
+RN PWI
Sbjct: 129 VRNDAPWI 136


>sp|PSTB_METKA|PHOSPHATE import ATP-binding protein PstB|Methanopyrus kandleri (strain AV19

Query: 2 QLRNKFPWI 10
Q N FPW+
Sbjct: 93 QHPNPFPWM 101


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LRNKFPWI 10
+RN PWI
Sbjct: 129 VRNGAPWI 136


>sp|ILVC_METMA|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina mazei (strain ATCC

Query: 2 QLRNKFPWI 10
Q+R PW+
Sbjct: 320 QIRANIPWL 328


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 2 QLRNKFPWI 10
Q+R PW+
Sbjct: 320 QIRANIPWL 328


>sp|ILVC_METAR|KETOL-ACID reductoisomerase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 2 QLRNKFPWI 10
+LR+ PW+
Sbjct: 320 ELRSMMPWL 328


>sp|Y047_ARCFU|UNCHARACTERIZED protein AF_0047|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DQLRNKFPWI 10
+QL NK W+
Sbjct: 14 EQLENKVAWL 23


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 DQLRNKFPWI 10
D+LR K W+
Sbjct: 332 DKLRGKRVWV 341


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DQLRNKFPWI 10
++ RNK W+
Sbjct: 481 EEFRNKIEWL 490


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DQLRNKFPWI 10
D++RN W+
Sbjct: 141 DRIRNDLKWL 150


>sp|FLAD_METVO|PUTATIVE flagella-related protein D|Methanococcus voltae

Query: 1 DQLRNKFP 8
D+LR+K P
Sbjct: 27 DELRHKIP 34


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 1 DQLRNKFPWI 10
+ LRN+ WI
Sbjct: 310 EDLRNRLDWI 319




40|Sequence|196|205|KFPWINTEGV

>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 1 KFPWINTEGV 10
+F WI+ EGV
Sbjct: 215 EFGWISPEGV 224


>sp|ILVC_METBU|KETOL-ACID reductoisomerase (NADP(+))|Methanococcoides burtonii (strain DSM

Query: 3 PWINTE 8
PW+N+E
Sbjct: 326 PWLNSE 331


>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 4 WINTEG 9
WIN EG
Sbjct: 45 WINNEG 50


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 FPWINTEGV 10
FP +N EG+
Sbjct: 486 FPLVNKEGM 494


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 FPWINTEGV 10
FP +N EG+
Sbjct: 486 FPLVNKEGM 494


>sp|CARA_HALSA|CARBAMOYL phosphate synthase small chain|Halobacterium salinarum (strain

Query: 4 WINTEGV 10
W+ TEGV
Sbjct: 90 WLRTEGV 96


>sp|CARA_HALS3|CARBAMOYL phosphate synthase small chain|Halobacterium salinarum (strain

Query: 4 WINTEGV 10
W+ TEGV
Sbjct: 90 WLRTEGV 96


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FPWINTEGV 10
FP +N EG+
Sbjct: 486 FPLVNKEGM 494


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FPWINTEGV 10
FP +N EG+
Sbjct: 486 FPLVNKEGM 494


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 FPWINTEGV 10
FP +N EG+
Sbjct: 486 FPLVNKEGM 494


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 2 FPWINT 7
FPWI++
Sbjct: 379 FPWISS 384


>sp|CAS2_METKA|CRISPR-ASSOCIATED endoribonuclease Cas2|Methanopyrus kandleri (strain AV19 /

Query: 4 WINTEGV 10
W++ EGV
Sbjct: 90 WVDAEGV 96


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KFPWINTEGV 10
+ PW TEG+
Sbjct: 427 ELPWHPTEGL 436


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KFPWINTE 8
K P+INT+
Sbjct: 100 KLPYINTK 107




41|Sequence|201|210|NTEGVALASY

>sp|RPO11_METJA|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanocaldococcus jannaschii

Query: 3 EGVALASY 10
EGV +ASY
Sbjct: 36 EGVKMASY 43


>sp|FEN_METST|FLAP endonuclease 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TEGVALASY 10
TEG A ASY
Sbjct: 151 TEGEAQASY 159


>sp|RPO11_METMP|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain

Query: 3 EGVALASY 10
+GV LASY
Sbjct: 37 DGVILASY 44


>sp|TPIS_METFV|TRIOSEPHOSPHATE isomerase|Methanothermus fervidus (strain ATCC 43054

Query: 2 TEGVALAS 9
TEGV LAS
Sbjct: 196 TEGVLLAS 203


>sp|RPO11_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo11|Haloarcula marismortui (strain ATCC

Query: 2 TEGVALASY 10
TEGV A+Y
Sbjct: 35 TEGVTAATY 43


>sp|RPO11_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo11|Halobacterium salinarum (strain ATCC

Query: 2 TEGVALASY 10
T+GV ASY
Sbjct: 35 TDGVTAASY 43


>sp|RPO11_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo11|Halobacterium salinarum (strain ATCC

Query: 2 TEGVALASY 10
T+GV ASY
Sbjct: 35 TDGVTAASY 43


>sp|HEM3_PYRNV|PROBABLE porphobilinogen deaminase|Pyrobaculum neutrophilum (strain DSM

Query: 2 TEGVALASY 10
T G+ALA Y
Sbjct: 87 TPGLALAGY 95




42|Sequence|206|215|ALASYGMEDE

>sp|SPSS1_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LASYGMEDE 10
L++YG+ DE
Sbjct: 346 LSTYGLSDE 354


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 2 LASYGMED 9
LA Y MED
Sbjct: 310 LAQYSMED 317


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 LASYGMED 9
LA Y MED
Sbjct: 310 LAQYSMED 317


>sp|KHSE_PICTO|HOMOSERINE kinase|Picrophilus torridus (strain ATCC 700027

Query: 2 LASYGMED 9
L SYGM D
Sbjct: 214 LVSYGMND 221


>sp|RPO11_METM6|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain C6

Query: 2 LASYGME 8
LASYG+E
Sbjct: 41 LASYGVE 47


>sp|HPRL1_HALMA|HGPRTASE-LIKE protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 4 SYGMEDE 10
SYG++DE
Sbjct: 85 SYGLDDE 91


>sp|Y659_METJA|UNCHARACTERIZED protein MJ0659|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LASYGMEDE 10
++S+G++DE
Sbjct: 53 ISSFGLKDE 61


>sp|RPO11_METM5|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain C5

Query: 2 LASYGME 8
LASYG+E
Sbjct: 41 LASYGVE 47


>sp|RPO11_METM7|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain C7

Query: 2 LASYGME 8
LASYG+E
Sbjct: 41 LASYGVE 47


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 5 YGMEDE 10
YG+EDE
Sbjct: 400 YGIEDE 405


>sp|RPO11_METMP|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain

Query: 2 LASYGME 8
LASYG+E
Sbjct: 41 LASYGVE 47


>sp|HPRL1_NATMM|HGPRTASE-LIKE protein 1|Natrialba magadii (strain ATCC 43099

Query: 5 YGMEDE 10
YG+EDE
Sbjct: 87 YGLEDE 92


>sp|G1PDH_THEAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 YGMEDE 10
YG+EDE
Sbjct: 307 YGIEDE 312


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 ALASYGME 8
A ASYG+E
Sbjct: 779 ATASYGVE 786


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 ALASYGME 8
A ASYG+E
Sbjct: 779 ATASYGVE 786




43|Sequence|211|220|GMEDEGWFDP

>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 GMEDEGWFDP 10
GME + WFDP
Sbjct: 506 GMEADVWFDP 515


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 6 GWFDP 10
GW+DP
Sbjct: 305 GWYDP 309


>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EDEGWFDP 10
+DE W DP
Sbjct: 257 KDENWTDP 264


>sp|RPO6_METMA|DNA-DIRECTED RNA polymerase subunit Rpo6|Methanosarcina mazei (strain ATCC

Query: 2 MEDEGWFDP 10
+ED+G DP
Sbjct: 53 VEDDGRLDP 61


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 GMEDEGWFD 9
G+E EG+F+
Sbjct: 75 GVEAEGYFN 83


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GMEDEG 6
G+EDEG
Sbjct: 75 GLEDEG 80


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 EGWFDP 10
E WFDP
Sbjct: 150 ETWFDP 155


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 MEDEGWFD 9
M +EGW D
Sbjct: 33 MPEEGWPD 40


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GMEDEGWFDP 10
G+ DEG F P
Sbjct: 201 GVGDEGGFAP 210


>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GMEDEGWF 8
G E E WF
Sbjct: 342 GQEPEEWF 349


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 EDEGWFD 9
ED+G+FD
Sbjct: 362 EDKGFFD 368


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GMEDEGWFDP 10
G+ DEG F P
Sbjct: 200 GVGDEGGFAP 209


>sp|ACDE_METTH|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanothermobacter

Query: 2 MEDEGWF 8
M+D+ WF
Sbjct: 158 MDDDEWF 164


>sp|TFE_SACI7|TRANSCRIPTION factor E|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 EDEGWF 8
+D GWF
Sbjct: 71 KDSGWF 76


>sp|TFE_SACI6|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.16.4 /

Query: 3 EDEGWF 8
+D GWF
Sbjct: 71 KDSGWF 76


>sp|TFE_SACI4|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.14.25 /

Query: 3 EDEGWF 8
+D GWF
Sbjct: 71 KDSGWF 76


>sp|TFE_SACI3|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 EDEGWF 8
+D GWF
Sbjct: 71 KDSGWF 76


>sp|TFE_SACI2|TRANSCRIPTION factor E|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 EDEGWF 8
+D GWF
Sbjct: 71 KDSGWF 76


>sp|DCDB_NANEQ|DCTP deaminase, dUMP-forming|Nanoarchaeum equitans (strain Kin4-M)

Query: 6 GWFDP 10
GW DP
Sbjct: 130 GWIDP 134


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GMEDEGWFDP 10
G+E E W +P
Sbjct: 223 GIEMENWEEP 232


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 4 DEGWF 8
DEGWF
Sbjct: 8 DEGWF 12


>sp|TFE_SACS2|TRANSCRIPTION factor E|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EDEGWF 8
+D GWF
Sbjct: 71 KDSGWF 76


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 4 DEGWFDP 10
+ GW++P
Sbjct: 413 EPGWYEP 419


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain

Query: 4 DEGWF 8
DEGWF
Sbjct: 8 DEGWF 12


>sp|TFE_SACI1|TRANSCRIPTION factor E|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 EDEGWF 8
+D GWF
Sbjct: 71 KDSGWF 76




44|Sequence|216|225|GWFDPWCLLQ

>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GWFDPW 6
GWFD W
Sbjct: 272 GWFDVW 277


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 5 PWCLLQ 10
PWCLL+
Sbjct: 43 PWCLLE 48


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 5 PWCLLQ 10
PWC L+
Sbjct: 49 PWCFLE 54


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 5 PWCLLQ 10
PWC L+
Sbjct: 46 PWCFLE 51


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 5 PWCLLQ 10
PWCL++
Sbjct: 515 PWCLVK 520


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WFDPWC 7
WF P+C
Sbjct: 488 WFQPFC 493


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 1 GWFDP 5
GW+DP
Sbjct: 305 GWYDP 309


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 5 PWCLLQ 10
PWC L+
Sbjct: 43 PWCFLK 48


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WFDPW 6
W++PW
Sbjct: 53 WYEPW 57


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 2 WFDPW 6
W++PW
Sbjct: 56 WYEPW 60


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 2 WFDPW 6
WFD W
Sbjct: 152 WFDTW 156


>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM 5456

Query: 3 FDPWCLLQ 10
+PW +LQ
Sbjct: 206 LEPWTMLQ 213


>sp|ASSY_METJA|ARGININOSUCCINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WFDP 5
WFDP
Sbjct: 313 WFDP 316


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 2 WFDPWCL 8
W +PW L
Sbjct: 409 WLEPWEL 415


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GWFDPWCLLQ 10
GW D W + +
Sbjct: 709 GWIDQWLIAE 718


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WFDPW 6
WF PW
Sbjct: 57 WFKPW 61


>sp|DCDB_NANEQ|DCTP deaminase, dUMP-forming|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GWFDP 5
GW DP
Sbjct: 130 GWIDP 134


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 WFDPW 6
WF PW
Sbjct: 57 WFKPW 61


>sp|CAS4_THETK|CRISPR-ASSOCIATED exonuclease Cas4|Thermoproteus tenax (strain ATCC 35583

Query: 2 WFDPWC 7
W+ WC
Sbjct: 175 WYRKWC 180


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 WFDPWC 7
W D WC
Sbjct: 273 WKDYWC 278


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WFDPW 6
WFDP+
Sbjct: 67 WFDPF 71


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GWFDPW 6
GW D W
Sbjct: 272 GWTDVW 277


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 WFDPW 6
W+D W
Sbjct: 555 WYDDW 559


>sp|MIG_AERPE|THYMINE-DNA glycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 4 DPWCLL 9
DPW +L
Sbjct: 35 DPWAIL 40


>sp|YAC1_METSH|UNCHARACTERIZED 16.9 kDa protein in|Methanothrix soehngenii (Methanosaeta concilii)

Query: 2 WFDPW 6
WF+PW
Sbjct: 98 WFEPW 102




45|Sequence|221|230|WCLLQGLRRK

>sp|Y773_ARCFU|UNCHARACTERIZED protein AF_0773|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WCLLQGL 7
WCLL+GL
Sbjct: 56 WCLLKGL 62


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 2 CLLQGLRRK 10
CL QGLR +
Sbjct: 72 CLWQGLRYR 80


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 1 WCLLQG 6
WC+L+G
Sbjct: 422 WCVLEG 427


>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WCLLQGLRR 9
W L +GLR+
Sbjct: 403 WSLREGLRK 411


>sp|COFD_METJA|2-PHOSPHO-L-LACTATE transferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLQGLRR 9
LLQGL+R
Sbjct: 17 LLQGLKR 23


>sp|DPCKG_HYPBU|GTP-DEPENDENT dephospho-CoA kinase|Hyperthermus butylicus (strain DSM 5456

Query: 2 CLLQGLR 8
CL QGLR
Sbjct: 10 CLPQGLR 16




46|Sequence|226|235|GLRRKVQSLG

>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRRKVQSLG 10
+RR+++SLG
Sbjct: 122 MRRQIKSLG 130


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 1 GLRRKVQS 8
G+RRK+QS
Sbjct: 514 GMRRKLQS 521


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM

Query: 2 LRRKVQSLG 10
+RR V+SLG
Sbjct: 80 IRRHVKSLG 88


>sp|TRPC_PICTO|INDOLE-3-GLYCEROL phosphate synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 LRRKVQSLG 10
L RK++SLG
Sbjct: 141 LNRKIKSLG 149


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GLRRKVQSLG 10
G+R K++SLG
Sbjct: 67 GVRDKLESLG 76


>sp|THIE_CALMQ|THIAMINE-PHOSPHATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GLRRKVQSL 9
GLRR VQS+
Sbjct: 145 GLRRVVQSV 153


>sp|RS4_METST|SMALL ribosomal subunit protein uS4|Methanosphaera stadtmanae (strain

Query: 2 LRRKVQSL 9
LRR++QSL
Sbjct: 101 LRRRLQSL 108


>sp|RIBL_PYRHO|FAD synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LRRKVQSLG 10
L+RK++S+G
Sbjct: 108 LKRKLKSIG 116




47|Sequence|231|240|VQSLGVLFCQ

>sp|GATD_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus vannielii (strain ATCC

Query: 1 VQSLGVLFCQ 10
+QSLGVL C+
Sbjct: 374 LQSLGVLPCE 383




48|Sequence|236|245|VLFCQGEVTR

>sp|ULIL_METAC|ULILYSIN acetivorans (strain ATCC 35395

Query: 1 VLFCQGEVTR 10
V+F QG+ TR
Sbjct: 299 VMFTQGQATR 308


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LFCQGE 7
LFC+GE
Sbjct: 855 LFCEGE 860


>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VLFCQGEVTR 10
VL+C G TR
Sbjct: 348 VLYCDGTDTR 357


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLFCQGEV 8
++FC+G+V
Sbjct: 64 IVFCKGKV 71


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLFCQGE 7
V FC+GE
Sbjct: 199 VCFCKGE 205


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VLFCQGE 7
V FC+GE
Sbjct: 199 VCFCKGE 205




49|Sequence|241|250|GEVTRFVSSS

>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GEVTRFVSSS 10
GE+ RF SSS
Sbjct: 731 GEIRRFKSSS 740


>sp|AATC_METMA|A-TYPE ATP synthase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EVTRFVSSS 10
E+TRF+ S
Sbjct: 56 EITRFIQES 64


>sp|AATC_METAC|A-TYPE ATP synthase subunit C|Methanosarcina acetivorans (strain ATCC

Query: 2 EVTRFVSSS 10
E+TRF+ S
Sbjct: 56 EITRFIQES 64


>sp|AATC_METBU|A-TYPE ATP synthase subunit C|Methanococcoides burtonii (strain DSM 6242

Query: 2 EVTRFVSSS 10
E+TRF+ S
Sbjct: 52 EITRFIEES 60


>sp|RNP3_PYRFU|RIBONUCLEASE P protein component 3|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EVTRFVSSS 10
+V RF+SSS
Sbjct: 163 KVPRFISSS 171


>sp|SPT5_SULAC|TRANSCRIPTION elongation factor Spt5|Sulfolobus acidocaldarius (strain ATCC

Query: 2 EVTRFVSSS 10
+VT+FVS S
Sbjct: 83 DVTKFVSKS 91




50|Sequence|246|255|FVSSSQRMLT

***** No hits found ******


51|Sequence|251|260|QRMLTTDDKA

>sp|TRM56_METAR|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocella arvoryzae

Query: 3 MLTTDDKA 10
+LTTDDK+
Sbjct: 36 LLTTDDKS 43


>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 2 RMLTTDDKA 10
+MLT DDK
Sbjct: 97 QMLTADDKG 105


>sp|DCUP_THEAC|UROPORPHYRINOGEN decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QRMLTTDDKA 10
+RM+ T++KA
Sbjct: 159 KRMMITEEKA 168


>sp|RS12_METKA|SMALL ribosomal subunit protein uS12|Methanopyrus kandleri (strain AV19

Query: 1 QRMLTTDDKA 10
+RML D+KA
Sbjct: 32 RRMLKLDEKA 41




52|Sequence|256|265|TDDKAVVLKR

>sp|ALAXM_METBF|ALANYL-TRNA editing protein AlaX-M|Methanosarcina barkeri (strain Fusaro /

Query: 1 TDDKAVVLKR 10
TDDK VVL R
Sbjct: 23 TDDKFVVLDR 32


>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 1 TDDKAVVLKR 10
TDDK VVL R
Sbjct: 23 TDDKYVVLDR 32


>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TDDKAVVLKR 10
TD++A+ LKR
Sbjct: 265 TDEEALSLKR 274


>sp|RTCA_HALSA|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 1 TDDKAVVL 8
TDD AVVL
Sbjct: 330 TDDGAVVL 337


>sp|RTCA_HALS3|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 1 TDDKAVVL 8
TDD AVVL
Sbjct: 330 TDDGAVVL 337


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 1 TDDKAVVLK 9
TDD+ VVLK
Sbjct: 579 TDDEMVVLK 587


>sp|Y685_PYRNV|UPF0201 protein Tneu_0685|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 TDDKAVVLK 9
T+DKA VLK
Sbjct: 12 TEDKAKVLK 20


>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DDKAVVLK 9
DD AVV+K
Sbjct: 38 DDAAVVIK 45


>sp|IF2P_ARCFU|PROBABLE translation initiation factor IF-2|Archaeoglobus fulgidus (strain

Query: 1 TDDKAVVLK 9
TD++ VVLK
Sbjct: 355 TDEEGVVLK 363


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 DDKAVVLKR 10
DD+ +VL+R
Sbjct: 452 DDREIVLER 460




53|Sequence|261|270|VVLKRIHEVH

>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 5 RIHEVH 10
RIHE+H
Sbjct: 106 RIHEIH 111


>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LKRIHEVH 10
+KR+HE H
Sbjct: 233 IKRLHEEH 240


>sp|YHMF_METFE|UNCHARACTERIZED 32.2 kDa protein in|Methanothermus fervidus

Query: 2 VLKRIHEVH 10
V++RI+E+H
Sbjct: 150 VMRRIYELH 158


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVLKRIHEVH 10
++L IHE H
Sbjct: 226 IILGAIHEAH 235


>sp|Y751_METJA|TNPB-LIKE protein MJ0751|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LKRIHE 8
LKRIHE
Sbjct: 102 LKRIHE 107




54|Sequence|266|275|IHEVHVKMDR

>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 1 IHEVHVKMD 9
IHE+HV+ D
Sbjct: 107 IHEIHVEED 115


>sp|RIBL_KORCO|FAD synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 IHEVHVKM 8
IHE H+KM
Sbjct: 17 IHEGHIKM 24


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 1 IHEVHVKMD 9
IHEVH++ D
Sbjct: 117 IHEVHLEED 125


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IHEVHVK 7
+HEVHV+
Sbjct: 243 LHEVHVE 249


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IHEVHVKMD 9
I+EV VKM+
Sbjct: 143 IYEVEVKMN 151




55|Sequence|271|280|VKMDRSLEYQ

>sp|HDRD_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina barkeri (strain

Query: 1 VKMDRSLEYQ 10
V+MDRS E+Q
Sbjct: 324 VEMDRSKEFQ 333


>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 1 VKMDRSLEYQ 10
V+MDR E+Q
Sbjct: 324 VEMDRVKEFQ 333


>sp|HDRD_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina acetivorans

Query: 1 VKMDRSLEYQ 10
V+MDR E+Q
Sbjct: 324 VEMDRVKEFQ 333


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VKMDRSLE 8
+KMDRS E
Sbjct: 5 IKMDRSKE 12


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 VKMDRSLE 8
+KMDRS E
Sbjct: 5 IKMDRSRE 12


>sp|HDRD_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina thermophila

Query: 1 VKMDRSLEYQ 10
V+MDR E+Q
Sbjct: 324 VEMDRIKEFQ 333


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 VKMDRSLE 8
+KMDRS E
Sbjct: 5 IKMDRSKE 12


>sp|TRPG_ARCFU|ANTHRANILATE synthase component 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KMDRSLEY 9
K DRSLE+
Sbjct: 52 KPDRSLEF 59


>sp|HEM3_ARCFU|PROBABLE porphobilinogen deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MDRSLEYQ 10
+DR +EYQ
Sbjct: 173 LDREVEYQ 180


>sp|ILVC_METS5|KETOL-ACID reductoisomerase (NAD(P)(+))|Metallosphaera sedula (strain ATCC

Query: 2 KMDRSLEYQ 10
+MD+SLE Q
Sbjct: 311 EMDKSLEEQ 319


>sp|KTHY_HALLT|PROBABLE thymidylate kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VKMDRSLEY 9
V +DR LEY
Sbjct: 104 VDIDRPLEY 112




56|Sequence|276|285|SLEYQPVECA

>sp|Y649_ARCFU|UPF0280 protein AF_0649|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YQPVECA 10
Y+P+EC+
Sbjct: 51 YEPIECS 57


>sp|Y196_THEAC|PUTATIVE ankyrin repeat protein Ta0196|Thermoplasma acidophilum (strain

Query: 4 YQPVEC 9
YQP EC
Sbjct: 9 YQPSEC 14


>sp|DTDA_PYRAE|D-AMINOACYL-TRNA deacylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 YQPVECA 10
Y+P ECA
Sbjct: 110 YEPFECA 116


>sp|DTDA_PYRAR|D-AMINOACYL-TRNA deacylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 YQPVECA 10
Y+P ECA
Sbjct: 111 YEPFECA 117


>sp|IF2G_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 3 EYQPVE 8
EYQPVE
Sbjct: 265 EYQPVE 270


>sp|RL37A_AERPE|LARGE ribosomal subunit protein eL43|Aeropyrum pernix (strain ATCC

Query: 4 YQPVEC 9
YQP EC
Sbjct: 33 YQPHEC 38


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SLEYQPVE 8
S EY PVE
Sbjct: 779 SFEYVPVE 786


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SLEYQPVE 8
S EY PVE
Sbjct: 779 SFEYVPVE 786


>sp|DTDA_PYRIL|D-AMINOACYL-TRNA deacylase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LEYQPVECA 10
L Y+P CA
Sbjct: 109 LAYEPYTCA 117




57|Sequence|281|290|PVECAIVINA

>sp|TAL_PICTO|PROBABLE transaldolase|Picrophilus torridus (strain ATCC 700027

Query: 1 PVECAIVINA 10
PV C +V NA
Sbjct: 106 PVNCTLVFNA 115


>sp|RL10E_META3|LARGE ribosomal subunit protein uL16|Methanococcus aeolicus (strain ATCC

Query: 1 PVECAIVI 8
PV+C IVI
Sbjct: 157 PVKCKIVI 164


>sp|RL10E_METTH|LARGE ribosomal subunit protein uL16|Methanothermobacter

Query: 1 PVECAIVIN 9
PV C IVI+
Sbjct: 145 PVPCRIVID 153


>sp|AROE_PYRIL|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PVECAIVINA 10
PV+ +VINA
Sbjct: 172 PVKADVVINA 181


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVECAIV 7
P ECAI+
Sbjct: 428 PAECAIL 434


>sp|RL10E_METJA|LARGE ribosomal subunit protein uL16|Methanocaldococcus jannaschii

Query: 1 PVECAIVI 8
PV C IVI
Sbjct: 158 PVPCRIVI 165




58|Sequence|286|295|IVINAAGAWS

>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 2 VINAAGAWS 10
V+NA GAW+
Sbjct: 210 VVNATGAWA 218


>sp|PORD_PYRHO|PYRUVATE synthase subunit PorD|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VINAAGAW 9
VIN G+W
Sbjct: 34 VINKTGSW 41


>sp|PORD_PYRFU|PYRUVATE synthase subunit PorD|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VINAAGAW 9
VIN G+W
Sbjct: 34 VINKTGSW 41


>sp|PORD_PYRAB|PYRUVATE synthase subunit PorD|Pyrococcus abyssi (strain GE5 /

Query: 2 VINAAGAW 9
VIN G+W
Sbjct: 34 VINKTGSW 41


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 IVINAAGA 8
I++NAAGA
Sbjct: 278 ILMNAAGA 285


>sp|FRHB_METVO|COENZYME F420 hydrogenase subunit beta|Methanococcus voltae

Query: 2 VINAAGA 8
V+NAAGA
Sbjct: 68 VLNAAGA 74




59|Sequence|291|300|AGAWSAQIAA

>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 2 GAWSAQIA 9
GAW+AQI+
Sbjct: 192 GAWAAQIS 199


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 2 GAWSAQIAA 10
GAW+ Q+AA
Sbjct: 212 GAWAGQLAA 220


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 1 AGAWSAQIAA 10
A W AQ+AA
Sbjct: 377 AAYWKAQLAA 386


>sp|ARCH_METMA|PROTEIN archease|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AGAWSAQI 8
AG W AQ+
Sbjct: 135 AGGWKAQV 142


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 AGAWSAQIAA 10
AGAW +AA
Sbjct: 651 AGAWVRDVAA 660




60|Sequence|296|305|AQIAALAGVG

>sp|LYSZ_AERPE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Aeropyrum pernix

Query: 2 QIAALAGVG 10
+IAA AGVG
Sbjct: 221 EIAAKAGVG 229




61|Sequence|301|310|LAGVGEGPPG

>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 2 AGVGEGPPG 10
AGV GPPG
Sbjct: 261 AGVLVGPPG 269


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 LAGVGEGPPG 10
L G GEG PG
Sbjct: 464 LMGFGEGEPG 473


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 VGEGPPG 10
VGEG PG
Sbjct: 196 VGEGRPG 202


>sp|CIMA_METMA|PUTATIVE (R)-citramalate synthase CimA|Methanosarcina mazei (strain ATCC

Query: 2 AGVGEGP 8
AG+G GP
Sbjct: 399 AGIGNGP 405


>sp|CIMA_METAC|PUTATIVE (R)-citramalate synthase CimA|Methanosarcina acetivorans (strain

Query: 2 AGVGEGP 8
AG+G GP
Sbjct: 399 AGIGNGP 405


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 2 AGVGEGPPG 10
+GV GPPG
Sbjct: 276 SGVFVGPPG 284


>sp|BACH_HALHM|HALORHODOPSIN halobium (strain mex)

Query: 1 LAGVGEGPPG 10
LAG+G GP G
Sbjct: 61 LAGMGAGPEG 70


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAGVGEGPPG 10
+A VG GP G
Sbjct: 11 IAVVGAGPAG 20


>sp|PTH_METBF|PEPTIDYL-TRNA hydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AGVGEGPPG 10
AG+ E PPG
Sbjct: 82 AGLTEIPPG 90


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 LAGVGEGP 8
LAGV +GP
Sbjct: 544 LAGVAQGP 551


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 LAGVGEGP 8
LAGV +GP
Sbjct: 545 LAGVAQGP 552


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 AGVGEG 7
AGVGEG
Sbjct: 128 AGVGEG 133


>sp|PTH_ARCFU|PEPTIDYL-TRNA hydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AGVGEGPPG 10
AG+ E PPG
Sbjct: 81 AGLTEVPPG 89


>sp|PTH_PYRAB|PEPTIDYL-TRNA hydrolase|Pyrococcus abyssi (strain GE5 /

Query: 2 AGVGEGPPG 10
AG+ E PPG
Sbjct: 85 AGLTEIPPG 93


>sp|PTH_METS5|PEPTIDYL-TRNA hydrolase|Metallosphaera sedula (strain ATCC 51363

Query: 2 AGVGEGP 8
AG+G GP
Sbjct: 97 AGIGPGP 103


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 LAGVGEGP 8
+AGV +GP
Sbjct: 536 IAGVAQGP 543




62|Sequence|306|315|EGPPGTLQGT

>sp|NDK_SACS2|NUCLEOSIDE diphosphate kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EGPPGTLQG 9
E PPGT++G
Sbjct: 97 EAPPGTIRG 105


>sp|NDK_SACI7|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EGPPGTLQG 9
E PPGT++G
Sbjct: 97 EAPPGTIRG 105


>sp|NDK_SACI6|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EGPPGTLQG 9
E PPGT++G
Sbjct: 97 EAPPGTIRG 105


>sp|NDK_SACI4|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EGPPGTLQG 9
E PPGT++G
Sbjct: 97 EAPPGTIRG 105


>sp|NDK_SACI3|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain M.16.27)

Query: 1 EGPPGTLQG 9
E PPGT++G
Sbjct: 97 EAPPGTIRG 105


>sp|NDK_SACI2|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EGPPGTLQG 9
E PPGT++G
Sbjct: 97 EAPPGTIRG 105


>sp|NDK_SACI1|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EGPPGTLQG 9
E PPGT++G
Sbjct: 97 EAPPGTIRG 105


>sp|NDK_SULTO|NUCLEOSIDE diphosphate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EGPPGTLQG 9
E PPGT++G
Sbjct: 97 EAPPGTIRG 105


>sp|NDK_STAMF|NUCLEOSIDE diphosphate kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 EGPPGTLQG 9
E PPGT++G
Sbjct: 97 EAPPGTIRG 105


>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GPPGTLQGT 10
GPPG +GT
Sbjct: 7 GPPGAGKGT 15


>sp|RNZ_PICTO|RIBONUCLEASE Z|Picrophilus torridus (strain ATCC 700027

Query: 2 GPPGTL 7
GPPGT+
Sbjct: 93 GPPGTI 98


>sp|NDK_HYPBU|NUCLEOSIDE diphosphate kinase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EGPPGTLQG 9
+ PPGT++G
Sbjct: 97 KAPPGTIRG 105


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 1 EGPPGTLQG 9
+GP GT++G
Sbjct: 102 DGPEGTVEG 110


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GPPGTLQGT 10
GPPG+ +GT
Sbjct: 7 GPPGSGKGT 15


>sp|KAD_METMA|ADENYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GPPGTLQGT 10
GPPG +GT
Sbjct: 7 GPPGAGKGT 15


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 44 GPPGTGKTT 52


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 47 GPPGTGKTT 55


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 45 GPPGTGKTT 53


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 51 GPPGTGKTT 59


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 48 GPPGTGKTT 56


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 44 GPPGTGKTT 52


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 42 GPPGTGKTT 50


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 51 GPPGTGKTT 59


>sp|RFCS_AERPE|REPLICATION factor C small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 47 GPPGTGKTT 55


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 44 GPPGTGKTT 52


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 44 GPPGTGKTT 52


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 44 GPPGTGKTT 52


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 44 GPPGTGKTT 52


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 44 GPPGTGKTT 52


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 45 GPPGTGKTT 53


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 62 GPPGTGKTT 70


>sp|KAD_ARCFU|ADENYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GPPGTLQGT 10
GPPG +GT
Sbjct: 7 GPPGAGKGT 15


>sp|KAD_METBF|ADENYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GPPGTLQGT 10
GPPG +GT
Sbjct: 7 GPPGAGKGT 15


>sp|KAD_METAC|ADENYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GPPGTLQGT 10
GPPG +GT
Sbjct: 7 GPPGAGKGT 15


>sp|KAD_HALMA|ADENYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GPPGTLQGT 10
GPPG +GT
Sbjct: 10 GPPGAGKGT 18


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 44 GPPGTGKTT 52


>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPGTLQG 9
PPGTL+G
Sbjct: 120 PPGTLEG 126


>sp|CFBE_METAC|COENZYME F(430) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PPGTLQG 9
PPG++QG
Sbjct: 408 PPGSVQG 414


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 2 GPPGT 6
GPPGT
Sbjct: 207 GPPGT 211


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GPPGT 6
GPPGT
Sbjct: 45 GPPGT 49


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GPPGT 6
GPPGT
Sbjct: 75 GPPGT 79


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC

Query: 2 GPPGT 6
GPPGT
Sbjct: 59 GPPGT 63


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 2 GPPGT 6
GPPGT
Sbjct: 59 GPPGT 63


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 GPPGT 6
GPPGT
Sbjct: 48 GPPGT 52


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 1 EGPPG 5
EGPPG
Sbjct: 239 EGPPG 243


Query: 2 GPPGTLQGT 10
P GT++GT
Sbjct: 399 APDGTVKGT 407


>sp|KAD_METBU|ADENYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GPPGTLQGT 10
GPPG +GT
Sbjct: 7 GPPGAGKGT 15


>sp|CDC66_HALSA|ORC1-TYPE DNA replication protein 6|Halobacterium salinarum (strain ATCC

Query: 2 GPPGTLQGT 10
GPPGT + T
Sbjct: 62 GPPGTGKTT 70


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GPPGTL 7
GPPGTL
Sbjct: 222 GPPGTL 227


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 2 GPPGT 6
GPPGT
Sbjct: 191 GPPGT 195


>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GPPGTLQ 8
PPGTL+
Sbjct: 152 APPGTLE 158


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 2 GPPGT 6
GPPGT
Sbjct: 220 GPPGT 224


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GPPGTLQ 8
PPGTL+
Sbjct: 152 APPGTLE 158


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GPPGT 6
GPPGT
Sbjct: 189 GPPGT 193


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 2 GPPGT 6
GPPGT
Sbjct: 189 GPPGT 193


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 2 GPPGT 6
GPPGT
Sbjct: 189 GPPGT 193


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 2 GPPGT 6
GPPGT
Sbjct: 189 GPPGT 193


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GPPGT 6
GPPGT
Sbjct: 175 GPPGT 179


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GPPGT 6
GPPGT
Sbjct: 175 GPPGT 179


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GPPGT 6
GPPGT
Sbjct: 175 GPPGT 179


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GPPGT 6
GPPGT
Sbjct: 175 GPPGT 179


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GPPGT 6
GPPGT
Sbjct: 175 GPPGT 179


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GPPGT 6
GPPGT
Sbjct: 175 GPPGT 179


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPPGT 6
GPPGT
Sbjct: 161 GPPGT 165


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GPPGT 6
GPPGT
Sbjct: 175 GPPGT 179


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GPPGT 6
GPPGT
Sbjct: 189 GPPGT 193


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPPGT 6
GPPGT
Sbjct: 211 GPPGT 215


>sp|HIS7_CENSY|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Cenarchaeum symbiosum (strain A)

Query: 1 EGPPGT 6
EGPP T
Sbjct: 184 EGPPST 189


>sp|NDK_PYRAE|NUCLEOSIDE diphosphate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GPPGTLQG 9
PPGT++G
Sbjct: 131 APPGTIRG 138


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 2 GPPGT 6
GPPGT
Sbjct: 193 GPPGT 197


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPPGT 6
GPPGT
Sbjct: 189 GPPGT 193


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GPPGT 6
GPPGT
Sbjct: 175 GPPGT 179


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GPPGT 6
GPPGT
Sbjct: 194 GPPGT 198


>sp|IF2B_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 4 PGTLQG 9
PGTL+G
Sbjct: 68 PGTLEG 73


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 GPPGT 6
GPPGT
Sbjct: 194 GPPGT 198


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GPPGT 6
GPPGT
Sbjct: 388 GPPGT 392


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GPPGT 6
GPPGT
Sbjct: 253 GPPGT 257


>sp|GFCR_METMJ|TRANSCRIPTIONAL regulator GfcR|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EGPPGTLQGT 10
E P G+L GT
Sbjct: 129 EAPTGSLSGT 138


>sp|DNAG_SACS2|DNA primase DnaG|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PGTLQG 9
PGTL+G
Sbjct: 320 PGTLEG 325


>sp|DNAG_SACI7|DNA primase DnaG|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 PGTLQG 9
PGTL+G
Sbjct: 316 PGTLEG 321


>sp|DNAG_SACI6|DNA primase DnaG|Saccharolobus islandicus (strain M.16.4 /

Query: 4 PGTLQG 9
PGTL+G
Sbjct: 316 PGTLEG 321


>sp|DNAG_SACI4|DNA primase DnaG|Saccharolobus islandicus (strain M.14.25 /

Query: 4 PGTLQG 9
PGTL+G
Sbjct: 316 PGTLEG 321


>sp|DNAG_SACI3|DNA primase DnaG|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 PGTLQG 9
PGTL+G
Sbjct: 316 PGTLEG 321


>sp|DNAG_SACI2|DNA primase DnaG|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 PGTLQG 9
PGTL+G
Sbjct: 316 PGTLEG 321


>sp|DNAG_SACI1|DNA primase DnaG|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 PGTLQG 9
PGTL+G
Sbjct: 316 PGTLEG 321


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GPPGT 6
GPPGT
Sbjct: 200 GPPGT 204


>sp|DNAG_SULAC|DNA primase DnaG|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PGTLQG 9
PGTL+G
Sbjct: 327 PGTLEG 332


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GPPGT 6
GPPGT
Sbjct: 192 GPPGT 196


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 2 GPPGT 6
GPPGT
Sbjct: 220 GPPGT 224


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GPPGT 6
GPPGT
Sbjct: 194 GPPGT 198


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GPPGTLQGT 10
GP G ++GT
Sbjct: 525 GPEGDIEGT 533


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GPPGT 6
GPPGT
Sbjct: 182 GPPGT 186


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPPGT 6
GPPGT
Sbjct: 180 GPPGT 184


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPPGT 6
GPPGT
Sbjct: 193 GPPGT 197


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC

Query: 2 GPPGTLQ 8
GPPG Q
Sbjct: 56 GPPGVAQ 62


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GPPGT 6
GPPGT
Sbjct: 231 GPPGT 235


>sp|DNAG_METS5|DNA primase DnaG|Metallosphaera sedula (strain ATCC 51363

Query: 4 PGTLQG 9
PGTL+G
Sbjct: 327 PGTLEG 332


>sp|Y078_METKA|UPF0285 protein MK0078|Methanopyrus kandleri (strain AV19 /

Query: 2 GPPGTLQG 9
G PG LQG
Sbjct: 187 GAPGVLQG 194


>sp|DNAG_SULTO|DNA primase DnaG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PGTLQG 9
PGTL+G
Sbjct: 321 PGTLEG 326


>sp|DPCKG_METMJ|GTP-DEPENDENT dephospho-CoA kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EGPPGTLQG 9
+ PPGT+ G
Sbjct: 81 KNPPGTITG 89


>sp|DPCKG_CENSY|GTP-DEPENDENT dephospho-CoA kinase|Cenarchaeum symbiosum (strain A)

Query: 1 EGPPGTLQGT 10
E PPGT+ T
Sbjct: 18 EAPPGTILVT 27


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GPPGT 6
GPPGT
Sbjct: 223 GPPGT 227




63|Sequence|311|320|TLQGTKLPVE

>sp|METK_NATPD|S-ADENOSYLMETHIONINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 QGTKLPVE 10
+GTK+P E
Sbjct: 99 EGTKIPAE 106


>sp|NFI_NATPD|ENDONUCLEASE V|Natronomonas pharaonis (strain ATCC 35678

Query: 3 QGTKLPVE 10
+GT++P+E
Sbjct: 163 EGTRVPIE 170


>sp|Y609_ARCFU|UNCHARACTERIZED protein AF_0609|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LQGTKLPVE 10
++GT++PV+
Sbjct: 17 IKGTRIPVD 25


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 4 GTKLPVE 10
GT++PVE
Sbjct: 23 GTRVPVE 29




64|Sequence|316|325|KLPVEPRKRY

>sp|CIMA_METJA|(R)-CITRAMALATE synthase CimA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLPVEPRK 8
KLPV P K
Sbjct: 265 KLPVPPNK 272


>sp|HIS6_HALSA|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum

Query: 3 PVEPRKRY 10
PVE KRY
Sbjct: 38 PVEMAKRY 45


>sp|HIS6_HALS3|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum

Query: 3 PVEPRKRY 10
PVE KRY
Sbjct: 38 PVEMAKRY 45


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 4 VEPRKRY 10
+EPRKR+
Sbjct: 204 IEPRKRF 210


>sp|KHSE_SACS2|HOMOSERINE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLPVEPRK 8
K+P+EP K
Sbjct: 52 KIPLEPNK 59


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 KLPVEPR 7
+LPV+PR
Sbjct: 411 ELPVDPR 417


>sp|SYH_METVS|HISTIDINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LPVEPRKR 9
LPVE +KR
Sbjct: 12 LPVEMKKR 19


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KLPVEPRKRY 10
K P+E KRY
Sbjct: 65 KKPIEIAKRY 74


>sp|FEN_METKA|FLAP endonuclease 1|Methanopyrus kandleri (strain AV19 /

Query: 2 LPVEPRK 8
LPVEP K
Sbjct: 274 LPVEPEK 280


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KLPVEPR 7
+LPV+PR
Sbjct: 420 ELPVDPR 426


>sp|SUCC_IGNH4|SUCCINATE--COA ligase [ADP-forming] subunit beta|Ignicoccus hospitalis (strain

Query: 1 KLPVEPR 7
KLP+EP
Sbjct: 138 KLPIEPE 144




65|Sequence|321|330|PRKRYVYVWH

>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 4 RYVYVWH 10
+Y Y+WH
Sbjct: 502 KYTYLWH 508


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PRKRYVY 7
PRKRY++
Sbjct: 413 PRKRYIH 419


>sp|DLYKI_THEX4|D-LYXOSE ketol-isomerase|Thermofilum sp. (strain ex4484_79)

Query: 2 RKRYVYVWH 10
+KRY VWH
Sbjct: 117 KKRYFTVWH 125


>sp|SPEE_SACI1|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 KRYVYVWH 10
K+Y+Y WH
Sbjct: 119 KKYLYEWH 126


>sp|SPEE_SACI7|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 KRYVYVWH 10
K+Y+Y WH
Sbjct: 119 KKYLYEWH 126


>sp|SPEE_SACI6|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 KRYVYVWH 10
K+Y+Y WH
Sbjct: 119 KKYLYEWH 126


>sp|SPEE_SACI4|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 KRYVYVWH 10
K+Y+Y WH
Sbjct: 119 KKYLYEWH 126


>sp|SPEE_SACI3|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 3 KRYVYVWH 10
K+Y+Y WH
Sbjct: 119 KKYLYEWH 126


>sp|SPEE_SACI2|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 KRYVYVWH 10
K+Y+Y WH
Sbjct: 119 KKYLYEWH 126


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 5 YVYVWH 10
Y Y+WH
Sbjct: 511 YTYLWH 516


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 5 YVYVWH 10
Y Y+WH
Sbjct: 514 YTYLWH 519


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 5 YVYVWH 10
Y Y+WH
Sbjct: 500 YTYLWH 505


>sp|SPEE_SACS2|POLYAMINE aminopropyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 KRYVYVWH 10
K+Y+Y WH
Sbjct: 119 KKYLYEWH 126


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 4 RYVYVWH 10
+Y Y WH
Sbjct: 490 KYTYFWH 496


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 4 RYVYVWH 10
+Y Y WH
Sbjct: 490 KYTYFWH 496


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 4 RYVYVWH 10
+Y Y WH
Sbjct: 490 KYTYFWH 496


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 2 RKRYVYVW 9
R+R V+VW
Sbjct: 569 RRRTVFVW 576


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 4 RYVYVWH 10
+Y Y WH
Sbjct: 490 KYTYFWH 496


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 5 YVYVWH 10
Y Y+WH
Sbjct: 481 YTYLWH 486


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 1 PRKRYVYV 8
PR R+VY+
Sbjct: 52 PRPRWVYL 59


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 2 RKRYVY 7
R+RYVY
Sbjct: 66 RRRYVY 71


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 2 RKRYVY 7
R+RYVY
Sbjct: 66 RRRYVY 71


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 2 RKRYVYVWH 10
RKR V+ W+
Sbjct: 60 RKRVVFRWN 68


>sp|T2MZ_METTF|TYPE II restriction enzyme MthZI|Methanothermobacter thermautotrophicus

Query: 4 RYVYVWH 10
RY+Y++H
Sbjct: 192 RYLYIYH 198


>sp|Y045_METJA|UNCHARACTERIZED protein MJ0045|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RKRYVY 7
RKRY+Y
Sbjct: 122 RKRYIY 127


>sp|ULIL_METAC|ULILYSIN acetivorans (strain ATCC 35395

Query: 1 PRKRYVYVW 9
P RY+ +W
Sbjct: 166 PADRYLNIW 174


>sp|GUAAA_NATPD|GMP synthase [glutamine-hydrolyzing] subunit A|Natronomonas pharaonis

Query: 2 RKRYVYVWH 10
R RY WH
Sbjct: 153 RNRYGVQWH 161


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 4 RYVYVW 9
RY+Y W
Sbjct: 474 RYLYYW 479


>sp|RL18_SACI7|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 3 KRYVYV 8
KRYVYV
Sbjct: 23 KRYVYV 28


>sp|RL18_SACI6|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 3 KRYVYV 8
KRYVYV
Sbjct: 23 KRYVYV 28


>sp|RL18_SACI4|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 3 KRYVYV 8
KRYVYV
Sbjct: 23 KRYVYV 28


>sp|RL18_SACI3|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 3 KRYVYV 8
KRYVYV
Sbjct: 23 KRYVYV 28


>sp|RL18_SACI2|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 3 KRYVYV 8
KRYVYV
Sbjct: 23 KRYVYV 28


>sp|RL18_SACS2|LARGE ribosomal subunit protein uL18|Saccharolobus solfataricus (strain

Query: 3 KRYVYV 8
KRYVYV
Sbjct: 26 KRYVYV 31


>sp|RL18_SACI1|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 3 KRYVYV 8
KRYVYV
Sbjct: 23 KRYVYV 28


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 5 YVYVWH 10
Y Y WH
Sbjct: 491 YTYHWH 496




66|Sequence|326|335|VYVWHCPQGP

>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VYVWHCPQ 8
VYV HCP+
Sbjct: 147 VYVAHCPE 154


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 VWHCPQ 8
+WHCP+
Sbjct: 737 LWHCPK 742


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VYVWHCPQ 8
+YV HCP+
Sbjct: 147 IYVAHCPE 154


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 VYVWHCPQ 8
+YV HCP+
Sbjct: 147 IYVAHCPE 154


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 VYVWHCPQ 8
+YV HCP+
Sbjct: 147 IYVAHCPE 154


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VYVWHCPQ 8
+YV HCP+
Sbjct: 149 IYVAHCPE 156


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 WHCP 7
WHCP
Sbjct: 157 WHCP 160


>sp|Y932_METKA|UNCHARACTERIZED protein MK0932|Methanopyrus kandleri (strain AV19 /

Query: 4 WHCPQG 9
W CP+G
Sbjct: 210 WECPEG 215


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 2 YVWHCPQGP 10
+++HCP P
Sbjct: 233 FLYHCPSCP 241


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VYVWH 5
VYVWH
Sbjct: 201 VYVWH 205


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VWHCPQ 8
VW+CP+
Sbjct: 409 VWYCPK 414


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 YVWHCPQG 9
YVW P+G
Sbjct: 206 YVWSFPKG 213


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 1 VYVWHCPQG 9
V W CP G
Sbjct: 376 VCAWSCPSG 384


>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 YVWHCPQG 9
YVW P+G
Sbjct: 208 YVWMFPKG 215


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 3 VWHCP 7
VW+CP
Sbjct: 281 VWNCP 285


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 3 VWHCP 7
VW+CP
Sbjct: 281 VWNCP 285


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 4 WHCPQG 9
W CP G
Sbjct: 561 WTCPHG 566


>sp|KHSE_METMP|HOMOSERINE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 VWHCP 7
VW+CP
Sbjct: 281 VWNCP 285


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YVWHCPQ 8
Y W CP+
Sbjct: 646 YNWKCPK 652


>sp|KHSE_METM5|HOMOSERINE kinase|Methanococcus maripaludis (strain C5 /

Query: 3 VWHCP 7
VW+CP
Sbjct: 281 VWNCP 285


>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain ATCC

Query: 1 VYVWHCPQG 9
V V+ CP G
Sbjct: 330 VVVYECPNG 338


>sp|Y1317_ARCFU|UNCHARACTERIZED protein AF_1317|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VYVWHCPQ 8
+Y W C Q
Sbjct: 150 IYYWACKQ 157


>sp|RF1_HALWD|PEPTIDE chain release factor subunit|Haloquadratum walsbyi (strain DSM

Query: 1 VYVWHCPQG 9
V V+ CP G
Sbjct: 330 VVVYECPDG 338


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YVWHCPQG 9
YVW P+G
Sbjct: 208 YVWVFPKG 215


>sp|GGR_METAR|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 YVWHCPQG 9
YVW P+G
Sbjct: 208 YVWVFPKG 215


>sp|GGR1_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanococcoides burtonii (strain DSM 6242

Query: 2 YVWHCPQG 9
YVW P+G
Sbjct: 208 YVWVFPKG 215


>sp|GGR_METS3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 YVWHCPQG 9
YVW P+G
Sbjct: 208 YVWIFPKG 215


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YVWHCPQG 9
YVW P+G
Sbjct: 207 YVWIFPKG 214


>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YVWHCPQG 9
YVW P+G
Sbjct: 208 YVWIFPKG 215


>sp|GGR_METAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YVWHCPQG 9
YVW P+G
Sbjct: 208 YVWIFPKG 215


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YVWHCPQG 9
YVW P+G
Sbjct: 207 YVWIFPKG 214


>sp|GGR2_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YVWHCPQG 9
YVW P+G
Sbjct: 208 YVWIFPKG 215


>sp|T1M2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 1 VYVWH 5
+YVWH
Sbjct: 158 LYVWH 162


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 1 VYVWH 5
+YVWH
Sbjct: 157 LYVWH 161


>sp|RL30_ARCFU|LARGE ribosomal subunit protein uL30|Archaeoglobus fulgidus (strain ATCC

Query: 4 WHCPQG 9
WH P+G
Sbjct: 130 WHYPRG 135


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 2 YVWHCPQ 8
YVW PQ
Sbjct: 10 YVWMIPQ 16


>sp|RNP1_HALMA|RIBONUCLEASE P protein component 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 VWHCPQ 8
VWH P+
Sbjct: 51 VWHVPK 56


>sp|Y525_METKA|UNCHARACTERIZED protein MK0525|Methanopyrus kandleri (strain AV19 /

Query: 3 VWHCPQ 8
VW CP+
Sbjct: 174 VWVCPE 179


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 YVWHCPQG 9
YVW P G
Sbjct: 12 YVWEIPPG 19


>sp|DAPAL_HALSA|UNCHARACTERIZED DapA-like lyase VNG_0444G|Halobacterium salinarum (strain ATCC

Query: 1 VYVWHCP 7
VYV+H P
Sbjct: 144 VYVYHIP 150


>sp|DAPAL_HALS3|UNCHARACTERIZED DapA-like lyase OE_1665R|Halobacterium salinarum (strain ATCC 29341

Query: 1 VYVWHCP 7
VYV+H P
Sbjct: 144 VYVYHIP 150


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 YVWHCPQG 9
Y+W P+G
Sbjct: 206 YIWLFPKG 213


>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 YVWHCPQG 9
Y+W P+G
Sbjct: 206 YIWLFPKG 213


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 2 YVWHCPQG 9
Y+W P+G
Sbjct: 206 YIWLFPKG 213


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 2 YVWHCPQG 9
Y+W P+G
Sbjct: 206 YIWLFPKG 213


>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 2 YVWHCPQG 9
Y+W P+G
Sbjct: 206 YIWLFPKG 213


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 VWHCPQ 8
+W+CP+
Sbjct: 398 LWYCPK 403


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 2 YVWHC 6
YV+HC
Sbjct: 243 YVYHC 247


>sp|SYP_THEPD|PROLINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 YVWHCPQGP 10
YVW GP
Sbjct: 254 YVWQTCYGP 262


>sp|GGR_THEVO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YVWHCPQG 9
Y+W P+G
Sbjct: 209 YIWVFPKG 216


>sp|GGR_THEAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YVWHCPQG 9
Y+W P+G
Sbjct: 209 YIWVFPKG 216


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 2 YVWHCPQG 9
Y+W P+G
Sbjct: 210 YIWVFPKG 217


>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 YVWHCPQG 9
Y+W P+G
Sbjct: 208 YIWVFPKG 215


>sp|GGR_METBF|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YVWHCPQG 9
Y+W P+G
Sbjct: 208 YIWVFPKG 215


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VYVWH 5
VY WH
Sbjct: 202 VYTWH 206


>sp|FENR_METS5|FERREDOXIN--NADP reductase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VYVWH 5
VY WH
Sbjct: 202 VYTWH 206


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VYVWH 5
VY WH
Sbjct: 197 VYTWH 201


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 VYVWHCPQG 9
+Y+W P G
Sbjct: 229 IYMWSWPPG 237


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 1 VYVWHCPQGP 10
VY+ CP P
Sbjct: 124 VYIPGCPPSP 133


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 VYVWHC 6
VYV HC
Sbjct: 5 VYVCHC 10


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VWHCPQ 8
+WHC +
Sbjct: 405 IWHCKK 410


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 VYVWHC 6
VYV HC
Sbjct: 17 VYVCHC 22


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 VYVWHC 6
VYV HC
Sbjct: 16 VYVCHC 21




67|Sequence|331|340|CPQGPGLETP

>sp|MTIP_METTH|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanothermobacter

Query: 1 CPQGPGLETP 10
C +GP ETP
Sbjct: 150 CTEGPRFETP 159


>sp|Y195_METB6|PUTATIVE HTH-type transcriptional regulatory protein|Methanoregula boonei

Query: 2 PQGPGL 7
PQGPG+
Sbjct: 204 PQGPGV 209


>sp|HIS51_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 CPQGPGL 7
CP+ PGL
Sbjct: 95 CPETPGL 101


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 GPGLET 9
GPGLET
Sbjct: 175 GPGLET 180


>sp|DNAG_IGNH4|DNA primase DnaG|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PQGPGLE 8
P GPG+E
Sbjct: 156 PAGPGVE 162


>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 2 PQGPGLE 8
P GPG+E
Sbjct: 159 PAGPGVE 165


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 1 CPQGPGLETP 10
CP GL TP
Sbjct: 380 CPCAFGLATP 389


>sp|DNAG_METTH|DNA primase DnaG|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 PQGPGLET 9
P GP +ET
Sbjct: 164 PAGPNVET 171


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 2 PQGPGLET 9
PQG G+E+
Sbjct: 256 PQGVGIES 263


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PQGPGLETP 10
P PGLE P
Sbjct: 14 PIHPGLEEP 22


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 3 QGPGLET 9
QG GLET
Sbjct: 13 QGSGLET 19


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PQGPGLETP 10
P GPG + P
Sbjct: 282 PVGPGTKVP 290


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PQGPGLETP 10
P G +ETP
Sbjct: 264 PDGRNIETP 272




68|Sequence|336|345|GLETPLVADT

>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 LETPLVADT 10
+ETP++A T
Sbjct: 71 VETPIIAST 79


>sp|SYY_HALLT|TYROSINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 LETPLVAD 9
L TPL+AD
Sbjct: 198 LHTPLIAD 205


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLETPLV 7
G+ETPLV
Sbjct: 363 GVETPLV 369


>sp|ALF_HALVD|FRUCTOSE-BISPHOSPHATE aldolase class 2|Haloferax volcanii (strain ATCC 29605

Query: 1 GLETPLV 7
GL+TPLV
Sbjct: 217 GLDTPLV 223


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 1 GLETPLVA 8
GLE P+VA
Sbjct: 530 GLEVPVVA 537


>sp|IDI2_METB6|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanoregula boonei (strain DSM 21154

Query: 1 GLETPLVADT 10
LE P +ADT
Sbjct: 103 ALENPALADT 112


>sp|PGP_AERPE|PHOSPHOGLYCOLATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLETPLVAD 9
GLE P+VA+
Sbjct: 65 GLEGPVVAE 73


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 2 LETPLVADT 10
+E P++ADT
Sbjct: 91 IEFPVIADT 99


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 2 LETPLVADT 10
+E P++ADT
Sbjct: 91 IEFPVIADT 99




69|Sequence|341|350|LVADTSGAYF

>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VADTSGAYF 10
V DT G YF
Sbjct: 332 VPDTGGVYF 340


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LVADTSGA 8
LV DT+GA
Sbjct: 249 LVVDTTGA 256


>sp|BSUHB_ARCFU|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE fulgidus (strain ATCC 49558

Query: 3 ADTSGAY 9
AD+SGAY
Sbjct: 128 ADSSGAY 134




70|Sequence|346|355|SGAYFRREGL

>sp|AROA_SULTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 2 GAYFRRE 8
G YF+RE
Sbjct: 62 GTYFKRE 68


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 4 YFRREGL 10
YF+R+GL
Sbjct: 120 YFQRKGL 126


>sp|XERA_THEKO|TYROSINE recombinase XerA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 AYFRREGL 10
AYFR EGL
Sbjct: 73 AYFRFEGL 80


>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 4 YFRREGL 10
YF+R+GL
Sbjct: 120 YFQRKGL 126


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 2 GAYFRREG 9
G YF REG
Sbjct: 74 GLYFVREG 81


>sp|SRP54_METBF|SIGNAL recognition particle 54 kDa|Methanosarcina barkeri (strain Fusaro /

Query: 4 YFRREGL 10
YF+R+GL
Sbjct: 120 YFQRKGL 126


>sp|SRP54_METMA|SIGNAL recognition particle 54 kDa|Methanosarcina mazei (strain ATCC

Query: 4 YFRREGL 10
YF+R+GL
Sbjct: 120 YFQRKGL 126


>sp|RS15_THEPD|SMALL ribosomal subunit protein uS15|Thermofilum pendens (strain DSM 2475

Query: 4 YFRREGL 10
Y++REG+
Sbjct: 126 YYKREGI 132


>sp|SRP54_METAC|SIGNAL recognition particle 54 kDa|Methanosarcina acetivorans (strain ATCC

Query: 4 YFRREGL 10
YF+R+GL
Sbjct: 120 YFQRKGL 126


>sp|XERA_PYRFU|TYROSINE recombinase XerA|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AYFRREGL 10
AYF+ EGL
Sbjct: 76 AYFKFEGL 83


>sp|XERA_PYRAB|TYROSINE recombinase XerA|Pyrococcus abyssi (strain GE5 /

Query: 3 AYFRREGL 10
AYF+ EGL
Sbjct: 78 AYFKFEGL 85




71|Sequence|351|360|RREGLGSNYL

>sp|GLCAE_SULTO|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 EGLGSNY 9
EGLG+NY
Sbjct: 141 EGLGTNY 147


>sp|Y1303_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1303|Methanocaldococcus jannaschii

Query: 1 RREGLGSNYL 10
+REGL YL
Sbjct: 135 KREGLAERYL 144


>sp|NASB_HALMT|PROBABLE nitrate transporter|Haloferax mediterranei (strain ATCC 33500

Query: 2 REGLGSN 8
REG GSN
Sbjct: 247 REGFGSN 253


>sp|PURQ_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RREGLGSNY 9
RREG G Y
Sbjct: 250 RREGYGDGY 258


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RREGLGSNY 9
RR GLG+ +
Sbjct: 500 RRRGLGTKF 508


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EGLGSNYL 10
+GLG NY+
Sbjct: 344 DGLGDNYV 351


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RREGLGS 7
RREG+G+
Sbjct: 206 RREGMGT 212


>sp|CYAS_METMA|CYSTEATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RREGLGS 7
RREG+G+
Sbjct: 206 RREGMGT 212


>sp|TPIS_METMJ|TRIOSEPHOSPHATE isomerase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 REGLGSN 8
+EG+GSN
Sbjct: 14 QEGMGSN 20


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 RREGLGSNYL 10
RR+G+G+ L
Sbjct: 205 RRDGMGTTVL 214


>sp|RS8_METB6|SMALL ribosomal subunit protein uS8|Methanoregula boonei (strain DSM

Query: 1 RREGLGSNYL 10
RREG+G L
Sbjct: 117 RREGIGGELL 126




72|Sequence|356|365|GSNYLGGRSP

>sp|RL6_METST|LARGE ribosomal subunit protein uL6|Methanosphaera stadtmanae (strain

Query: 3 NYLGGRSP 10
N+LG RSP
Sbjct: 112 NFLGERSP 119


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila (strain

Query: 2 SNYLGGRSP 10
SN+LG R P
Sbjct: 109 SNFLGERKP 117


>sp|FWDE_METJA|FERREDOXIN-TYPE protein FwdE|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SNYLGGRSP 10
S+YL GR P
Sbjct: 39 SHYLSGRYP 47


>sp|COFG_METPE|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GSNYLGGRSP 10
G+N LGG SP
Sbjct: 255 GANDLGGISP 264


>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GSNYLGGRSP 10
G +GGRSP
Sbjct: 124 GCELIGGRSP 133


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GSNYLGGRSP 10
G+ YL R+P
Sbjct: 455 GNKYLNARAP 464


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GSNYLGGRSP 10
G+ YL R+P
Sbjct: 455 GNKYLNARAP 464


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GSNYLGGRSP 10
G+ YL R+P
Sbjct: 455 GNRYLNARAP 464


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GSNYLGGRSP 10
G+ YL R+P
Sbjct: 453 GNRYLNARAP 462


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 GSNYLGGRSP 10
S+Y+ GRSP
Sbjct: 253 ASDYVRGRSP 262


>sp|Y239_METJA|UNCHARACTERIZED protein MJ0239|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSNYLG 6
GSNY+G
Sbjct: 88 GSNYMG 93


>sp|RL6_PICTO|LARGE ribosomal subunit protein uL6|Picrophilus torridus (strain ATCC

Query: 3 NYLGGRSP 10
N+LG +SP
Sbjct: 111 NFLGEKSP 118


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GSNYLGGRSP 10
G+ YL R+P
Sbjct: 451 GNRYLNARAP 460


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SNYLGG 7
+NYLGG
Sbjct: 240 ANYLGG 245


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 GSNYLGG 7
GS Y+GG
Sbjct: 9 GSGYIGG 15


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GSNYLGGRS 9
G+NY GRS
Sbjct: 235 GTNYAVGRS 243


>sp|IF6_PICTO|TRANSLATION initiation factor 6|Picrophilus torridus (strain ATCC 700027

Query: 1 GSNYLGG 7
GSNY+G
Sbjct: 183 GSNYVGA 189




73|Sequence|361|370|GGRSPTEQEE

>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGRSPTEQE 9
GGR P E++
Sbjct: 1695 GGRDPNEED 1703


>sp|TBP_METTP|TATA-BOX-BINDING protein|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GGRSPTEQEE 10
GG+SP E EE
Sbjct: 159 GGKSPEECEE 168


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 1 GGRSPTEQE 9
GG+SPT +E
Sbjct: 309 GGKSPTLKE 317


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 GGRSPTEQE 9
GG SPT++E
Sbjct: 222 GGHSPTKEE 230


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC

Query: 2 GRSPTEQE 9
GR+PTE E
Sbjct: 16 GRNPTEAE 23


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 1 GGRSPTEQ 8
GGRSP+ +
Sbjct: 48 GGRSPSNR 55


>sp|DPHB_PYRNV|DIPHTHINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GGRSPTEQE 9
GG SP E+E
Sbjct: 234 GGLSPVERE 242


>sp|TBP1_HALVD|TATA-BOX-BINDING protein 1|Haloferax volcanii (strain ATCC 29605

Query: 1 GGRSPTEQE 9
GG+ PT+ E
Sbjct: 161 GGKQPTDAE 169


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 5 PTEQEE 10
PTEQEE
Sbjct: 221 PTEQEE 226


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 5 PTEQEE 10
PTEQEE
Sbjct: 221 PTEQEE 226




74|Sequence|366|375|TEQEEPDPAN

>sp|RL18_METS5|LARGE ribosomal subunit protein uL18|Metallosphaera sedula (strain ATCC

Query: 2 EQEEPD 7
EQE+PD
Sbjct: 155 EQEDPD 160


>sp|AATI_METTH|A-TYPE ATP synthase subunit I|Methanothermobacter thermautotrophicus

Query: 1 TEQEEPDP 8
T+ E+PDP
Sbjct: 339 TDLEDPDP 346


>sp|SIHH_METTH|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 QEEPDPA 9
QE+PDP
Sbjct: 369 QEKPDPG 375


>sp|GATD_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 3 QEEPDPA 9
Q+EP+PA
Sbjct: 69 QKEPEPA 75


>sp|PIMT_STAMF|PROTEIN-L-ISOASPARTATE O-methyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 TEQEEPDPAN 10
TE+ +P+P N
Sbjct: 72 TEELDPEPGN 81




75|Sequence|371|380|PDPANLEVDH

>sp|RS2_NITMS|SMALL ribosomal subunit protein uS2|Nitrosopumilus maritimus (strain

Query: 2 DPANLEVD 9
DP N+E+D
Sbjct: 188 DPMNIEID 195


>sp|YPV5B_METTF|UNCHARACTERIZED protein ORF5B|Methanothermobacter thermautotrophicus

Query: 3 PANLEVDH 10
P NL+V H
Sbjct: 257 PGNLQVQH 264


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain

Query: 2 DPANLEVDH 10
+PA ++ DH
Sbjct: 50 NPATIQTDH 58


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 DPANLEVDH 10
+PA ++ DH
Sbjct: 50 NPATIQTDH 58


>sp|AROC_ARCFU|CHORISMATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PANLEVD 9
PA LEVD
Sbjct: 29 PAGLEVD 35


>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PANLEVD 9
P+N+EVD
Sbjct: 209 PSNIEVD 215


>sp|RL6_HALSA|LARGE ribosomal subunit protein uL6|Halobacterium salinarum (strain

Query: 1 PDPANLEVDH 10
PD EVDH
Sbjct: 9 PDDVTAEVDH 18


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PDPANLEVD 9
P+P +E+D
Sbjct: 435 PEPPKIEID 443


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PDPANLEV 8
PD A+LEV
Sbjct: 901 PDAASLEV 908


>sp|G1PDH_HALWD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DPANLEVDH 10
DP + VDH
Sbjct: 59 DPQTVSVDH 67




76|Sequence|376|385|LEVDHDFFQD

>sp|AROC_ARCFU|CHORISMATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEVDHDFFQ 9
LEVD +F Q
Sbjct: 32 LEVDEEFIQ 40


>sp|HEM1_PICTO|GLUTAMYL-TRNA reductase|Picrophilus torridus (strain ATCC 700027

Query: 2 EVDHDFFQD 10
E+D D F+D
Sbjct: 62 EIDKDLFKD 70


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EVDHDFF 8
E++H+FF
Sbjct: 149 EIEHEFF 155


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 2 EVDHDFF 8
E+D+DFF
Sbjct: 73 EIDYDFF 79


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 4 DHDFF 8
DHDFF
Sbjct: 295 DHDFF 299


>sp|Y436_PYRFU|KELCH domain-containing protein PF0436|Pyrococcus furiosus (strain ATCC

Query: 1 LEVDHD 6
+E+DHD
Sbjct: 42 IEIDHD 47


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 EVDHDFF 8
EV H+FF
Sbjct: 150 EVTHEFF 156


>sp|SYFB_METLZ|PHENYLALANINE--TRNA ligase beta subunit|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 DHDFFQD 10
DHD ++D
Sbjct: 324 DHDVYED 330


>sp|PCNA_METS3|DNA polymerase sliding clamp|Methanobrevibacter smithii (strain ATCC

Query: 1 LEVDHDFFQ 9
L+VD D+F+
Sbjct: 155 LQVDEDYFR 163


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEVDHDFFQD 10
L++DH F+D
Sbjct: 115 LKIDHGAFED 124




77|Sequence|381|390|DFFQDKVWPH

>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 1 DFFQDKVWP 9
D+ QD +WP
Sbjct: 79 DWLQDHIWP 87


>sp|UPPS_AERPE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Aeropyrum pernix

Query: 2 FFQDKVWP 9
+F DK+WP
Sbjct: 189 YFIDKLWP 196


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 FFQDKVWP 9
+ Q+K+WP
Sbjct: 77 WLQEKIWP 84


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FFQDKVWP 9
F Q K+WP
Sbjct: 47 FIQGKLWP 54


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 DFFQDKVWP 9
+FF+ VWP
Sbjct: 130 EFFRRYVWP 138


>sp|RL10E_HYPBU|LARGE ribosomal subunit protein uL16|Hyperthermus butylicus (strain DSM

Query: 2 FFQDKVWPH 10
FF+ +V+PH
Sbjct: 88 FFRVRVYPH 96


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 FFQDKVWP 9
F Q K+WP
Sbjct: 46 FIQGKLWP 53


>sp|Y609_METJA|UNCHARACTERIZED protein MJ0609|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFFQDKVW 8
+FF+ KVW
Sbjct: 310 EFFERKVW 317


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 QDKVWPH 10
QD++W H
Sbjct: 390 QDEMWKH 396


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FQDKVWP 9
FQ+ +WP
Sbjct: 602 FQENLWP 608


>sp|TOP6A_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FFQDKVW 8
+FQDK W
Sbjct: 333 WFQDKEW 339


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFFQDKVW 8
+FF++K W
Sbjct: 17 NFFKEKSW 24


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFFQDKVWPH 10
DF+ DK W +
Sbjct: 576 DFYGDKNWKY 585


>sp|RS3A_METKA|SMALL ribosomal subunit protein eS1|Methanopyrus kandleri (strain AV19

Query: 1 DFFQDKVW 8
D ++DKVW
Sbjct: 4 DKWKDKVW 11


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 2 FFQDKVWPH 10
FF + +WP+
Sbjct: 267 FFFENIWPY 275


>sp|UPPS_THEAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 2 FFQDKVWP 9
+F D WP
Sbjct: 228 YFSDVYWP 235


>sp|UPPS_THEVO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 2 FFQDKVWP 9
+F D WP
Sbjct: 228 YFSDVYWP 235


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FFQDKVWPH 10
FF ++WP+
Sbjct: 248 FFFTEIWPY 256


>sp|Y2294_THEKO|UPF0128 protein TK2294|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DFFQDKVW 8
DFF+D+V+
Sbjct: 138 DFFKDRVF 145




78|Sequence|386|395|KVWPHLALRV

>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 KVWPH 5
KVWPH
Sbjct: 284 KVWPH 288


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 KVWPHLAL 8
K +PHLAL
Sbjct: 106 KSYPHLAL 113


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KVWPHLA 7
++WP++A
Sbjct: 252 EIWPYMA 258


>sp|RL2_SULTO|LARGE ribosomal subunit protein uL2|Sulfurisphaera tokodaii (strain DSM

Query: 1 KVWPHL 6
K WPH+
Sbjct: 183 KKWPHV 188




79|Sequence|391|400|LALRVPAFET

***** No hits found ******


80|Sequence|396|405|PAFETLKVQS

>sp|NAR7_HALMT|PUTATIVE respiratory nitrate reductase heme|Haloferax mediterranei (strain

Query: 2 AFETLKVQS 10
+ ETL+VQS
Sbjct: 82 SIETLRVQS 90


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PAFETLKVQ 9
P FE LK++
Sbjct: 482 PQFELLKIE 490




81|Sequence|401|410|LKVQSAWAGY

>sp|AMZA_NANEQ|ARCHAEMETZINCIN equitans (strain Kin4-M)

Query: 4 QSAWAGY 10
QS WA Y
Sbjct: 9 QSMWANY 15


>sp|COXX_SACI7|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 SAWAGY 10
+AWAGY
Sbjct: 149 AAWAGY 154


>sp|COXX_SACI6|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 SAWAGY 10
+AWAGY
Sbjct: 149 AAWAGY 154


>sp|COXX_SACI4|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 SAWAGY 10
+AWAGY
Sbjct: 149 AAWAGY 154


>sp|COXX_SACI3|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 5 SAWAGY 10
+AWAGY
Sbjct: 149 AAWAGY 154


>sp|COXX_SACI2|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 SAWAGY 10
+AWAGY
Sbjct: 149 AAWAGY 154


>sp|COXX_SACI1|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 SAWAGY 10
+AWAGY
Sbjct: 149 AAWAGY 154


>sp|RS13_CENSY|SMALL ribosomal subunit protein uS13|Cenarchaeum symbiosum (strain A)

Query: 2 KVQSAWAGY 10
+V +W GY
Sbjct: 157 RVSGSWKGY 165


>sp|DCUP_THEAC|UROPORPHYRINOGEN decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LKVQSAWAGY 10
++ +WAGY
Sbjct: 195 FQIFDSWAGY 204


>sp|COXX_SACS2|PROTOHEME IX farnesyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 5 SAWAGY 10
+AWAGY
Sbjct: 149 AAWAGY 154


>sp|COXX_METS5|PROTOHEME IX farnesyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 5 SAWAGY 10
+AWAGY
Sbjct: 149 AAWAGY 154




82|Sequence|406|415|AWAGYYDYNT

>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 2 WAGYYDYN 9
WA +Y YN
Sbjct: 384 WASFYIYN 391


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 AWAGYYDYNT 10
W YY Y+T
Sbjct: 429 GWLKYYHYST 438


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 AGYYDY 8
AG+YDY
Sbjct: 28 AGFYDY 33


>sp|RLME_PICTO|RIBOSOMAL RNA large subunit methyltransferase|Picrophilus torridus (strain

Query: 2 WAGYYDY 8
W+GY++Y
Sbjct: 164 WSGYFNY 170


>sp|Y1375_METJA|UNCHARACTERIZED membrane protein MJ1375|Methanocaldococcus jannaschii (strain ATCC

Query: 2 WAGYYDYNT 10
W+G Y Y++
Sbjct: 253 WSGIYGYSS 261


>sp|IF2B_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7

Query: 5 YYDYNT 10
Y+DYN+
Sbjct: 4 YFDYNS 9


>sp|IF2B_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6

Query: 5 YYDYNT 10
Y+DYN+
Sbjct: 4 YFDYNS 9


>sp|IF2B_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5

Query: 5 YYDYNT 10
Y+DYN+
Sbjct: 4 YFDYNS 9


>sp|COXX_SACS2|PROTOHEME IX farnesyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 AWAGY 5
AWAGY
Sbjct: 150 AWAGY 154


>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 GYYDYN 9
GY+DY+
Sbjct: 261 GYFDYD 266


>sp|COXX_SACI7|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 AWAGY 5
AWAGY
Sbjct: 150 AWAGY 154


>sp|COXX_SACI6|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 AWAGY 5
AWAGY
Sbjct: 150 AWAGY 154


>sp|COXX_SACI4|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 AWAGY 5
AWAGY
Sbjct: 150 AWAGY 154


>sp|COXX_SACI3|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 AWAGY 5
AWAGY
Sbjct: 150 AWAGY 154


>sp|COXX_SACI2|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 AWAGY 5
AWAGY
Sbjct: 150 AWAGY 154


>sp|COXX_SACI1|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 AWAGY 5
AWAGY
Sbjct: 150 AWAGY 154


>sp|PANB_PYRAR|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM

Query: 2 WAGYYDYNT 10
W YDY T
Sbjct: 20 WVTAYDYPT 28


>sp|PANB_PYRAE|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC

Query: 2 WAGYYDYNT 10
W YDY T
Sbjct: 19 WVTAYDYPT 27


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 1 AWAGYYD 7
AW G YD
Sbjct: 333 AWFGRYD 339


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AGYYD 7
AGYYD
Sbjct: 563 AGYYD 567


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 4 GYYDYN 9
GYYD N
Sbjct: 498 GYYDEN 503


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 GYYDYN 9
G YDYN
Sbjct: 115 GNYDYN 120


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 3 AGYYD 7
AGYYD
Sbjct: 372 AGYYD 376


>sp|COXX_METS5|PROTOHEME IX farnesyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 AWAGY 5
AWAGY
Sbjct: 150 AWAGY 154




83|Sequence|411|420|YDYNTFDQNG

>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 YDYNTFDQNG 10
YD N DQNG
Sbjct: 467 YDINYVDQNG 476


>sp|ARGDC_AERPE|ARGININE decarboxylase proenzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 YDYNTFD 7
YDY TFD
Sbjct: 80 YDYATFD 86


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 YDYNTFDQNG 10
YD FD+NG
Sbjct: 158 YDERVFDKNG 167


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 YDYNTFDQNG 10
YD N D NG
Sbjct: 465 YDINYVDANG 474


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 3 YNTFDQ 8
YNTFD+
Sbjct: 63 YNTFDE 68


>sp|Y1705_METHJ|UPF0173 metal-dependent hydrolase Mhun_1705|Methanospirillum hungatei JF-1

Query: 3 YNTFDQ 8
YNTFD+
Sbjct: 181 YNTFDK 186


>sp|PSA_THEKO|PROTEASOME subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DYNTFDQN 9
DY+ DQN
Sbjct: 252 DYSELDQN 259


>sp|PSA_THEK1|PROTEASOME subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 2 DYNTFDQN 9
DY+ DQN
Sbjct: 252 DYSELDQN 259


>sp|PSA_THEGJ|PROTEASOME subunit alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DYNTFDQN 9
DY+ DQN
Sbjct: 252 DYSELDQN 259


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 1 YDYNTFD 7
Y++NTF+
Sbjct: 129 YEFNTFE 135


>sp|PPAC_ARCFU|PROBABLE manganese-dependent inorganic pyrophosphatase|Archaeoglobus

Query: 2 DYNTFDQNG 10
DY FD +G
Sbjct: 215 DYKDFDMSG 223


>sp|Y764_THEAC|UPF0173 metal-dependent hydrolase Ta0764|Thermoplasma acidophilum (strain

Query: 3 YNTFD 7
YNTFD
Sbjct: 189 YNTFD 193


>sp|Y2300_METMA|UPF0173 metal-dependent hydrolase MM_2300|Methanosarcina mazei (strain ATCC

Query: 3 YNTFD 7
YNTFD
Sbjct: 194 YNTFD 198


>sp|Y1308_METAC|UPF0173 metal-dependent hydrolase MA_1308|Methanosarcina acetivorans

Query: 3 YNTFD 7
YNTFD
Sbjct: 194 YNTFD 198


>sp|Y427_METAR|UPF0173 metal-dependent hydrolase UNCMA_04270|Methanocella arvoryzae

Query: 3 YNTFD 7
YNTFD
Sbjct: 193 YNTFD 197


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YDYNTFD 7
YDY FD
Sbjct: 397 YDYEFFD 403


>sp|Y864_THEVO|UPF0173 metal-dependent hydrolase TV0864|Thermoplasma volcanium (strain

Query: 3 YNTFD 7
YNTFD
Sbjct: 188 YNTFD 192


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 1 YDYNTFDQ 8
YD+N+F++
Sbjct: 396 YDWNSFNK 403


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YDYNTFDQNG 10
Y YN F + G
Sbjct: 192 YSYNDFREQG 201




84|Sequence|416|425|FDQNGVVGPH

>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FDQNGVV 7
+DQNGV+
Sbjct: 93 YDQNGVI 99


>sp|Y137_METJA|UNCHARACTERIZED protein MJ0137|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DQNGVVGP 9
D+N V+GP
Sbjct: 150 DENAVLGP 157


>sp|Y1495_METJA|UNCHARACTERIZED protein MJ1495|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DQNGVVGP 9
D+N V+GP
Sbjct: 154 DKNAVMGP 161


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 1 FDQNGVVGPH 10
F NG++ PH
Sbjct: 62 FANNGILIPH 71


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 2 DQNGVVGPH 10
D+N ++ PH
Sbjct: 84 DENAIIIPH 92


>sp|Y231_METJA|UNCHARACTERIZED protein MJ0231|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NGVVGPH 10
NGV+G H
Sbjct: 342 NGVIGSH 348


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 2 DQNGVVGPH 10
D N V+ PH
Sbjct: 88 DMNAVIVPH 96


>sp|HEM2_METJA|DELTA-AMINOLEVULINIC acid dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDQNGVV 7
+D+NGVV
Sbjct: 101 YDKNGVV 107


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 2 DQNGVVGP 9
D GVVGP
Sbjct: 339 DHVGVVGP 346


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 2 DQNGVVGP 9
D NG+ GP
Sbjct: 528 DSNGIPGP 535


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 2 DQNGVVGP 9
D NG+ GP
Sbjct: 528 DSNGIPGP 535


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain

Query: 2 DQNGVVGPH 10
D N +V PH
Sbjct: 86 DMNAIVIPH 94


>sp|PURP_METM7|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C7

Query: 2 DQNGVVGPH 10
D N ++ PH
Sbjct: 84 DMNAIIVPH 92


>sp|PURP_METM6|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C6

Query: 2 DQNGVVGPH 10
D N ++ PH
Sbjct: 84 DMNAIIVPH 92


>sp|PURP_METM5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C5

Query: 2 DQNGVVGPH 10
D N ++ PH
Sbjct: 84 DMNAIIVPH 92


>sp|PURP_METMP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain DSM

Query: 2 DQNGVVGPH 10
D N ++ PH
Sbjct: 84 DMNAIIVPH 92




85|Sequence|421|430|VVGPHPLVVN

>sp|TRPB_HALVD|TRYPTOPHAN synthase beta chain|Haloferax volcanii (strain ATCC 29605

Query: 1 VVGPHPL 7
VVGPHP
Sbjct: 191 VVGPHPF 197


>sp|TRPB1_ARCFU|TRYPTOPHAN synthase beta chain 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVGPHPL 7
VVGPHP
Sbjct: 198 VVGPHPF 204


>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VVGPHPL 7
VVGPHP
Sbjct: 190 VVGPHPF 196


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VVGPHP 6
VVGPHP
Sbjct: 197 VVGPHP 202


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VVGPHP 6
VVGPHP
Sbjct: 197 VVGPHP 202


>sp|TRPB1_PYRAB|TRYPTOPHAN synthase beta chain 1|Pyrococcus abyssi (strain GE5 /

Query: 1 VVGPHP 6
VVGPHP
Sbjct: 186 VVGPHP 191


>sp|TRPB1_PYRFU|TRYPTOPHAN synthase beta chain 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVGPHP 6
VVGPHP
Sbjct: 186 VVGPHP 191


>sp|TRPB_METKA|TRYPTOPHAN synthase beta chain|Methanopyrus kandleri (strain AV19 /

Query: 1 VVGPHP 6
VVGPHP
Sbjct: 193 VVGPHP 198


>sp|TRPB_HALSA|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 700922

Query: 1 VVGPHPL 7
VVGPHP
Sbjct: 199 VVGPHPF 205


>sp|TRPB_HALS3|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 29341

Query: 1 VVGPHPL 7
VVGPHP
Sbjct: 199 VVGPHPF 205


>sp|TRPB_METVO|TRYPTOPHAN synthase beta chain|Methanococcus voltae

Query: 1 VVGPHPL 7
V+GPHP
Sbjct: 196 VMGPHPF 202


>sp|OTC_METJA|ORNITHINE carbamoyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VGPHPLVVN 10
+G HPL++N
Sbjct: 62 LGGHPLIMN 70


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PHPLV 8
PHPLV
Sbjct: 272 PHPLV 276


>sp|RS4E_METS5|SMALL ribosomal subunit protein eS4|Metallosphaera sedula (strain ATCC

Query: 3 GPHPL 7
GPHPL
Sbjct: 29 GPHPL 33


>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 1 VVGPHPLVV 9
VVGP+P V
Sbjct: 189 VVGPYPYPV 197


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 5 HPLVVN 10
HPL+VN
Sbjct: 140 HPLLVN 145


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 HPLVVN 10
HPL+VN
Sbjct: 142 HPLLVN 147


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 5 HPLVVN 10
HPL+VN
Sbjct: 140 HPLLVN 145


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 5 HPLVVN 10
HPL+VN
Sbjct: 142 HPLLVN 147


>sp|TRUA_HALSA|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 4 PHPLVVN 10
PHPLV++
Sbjct: 217 PHPLVLH 223


>sp|TRUA_HALS3|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC 29341

Query: 4 PHPLVVN 10
PHPLV++
Sbjct: 217 PHPLVLH 223


>sp|AIPS_AERPE|ARCHAETIDYLINOSITOL phosphate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VVGPHPLVV 9
+ G HPL+V
Sbjct: 105 IAGVHPLIV 113


>sp|RPO11_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo11|Sulfolobus acidocaldarius (strain

Query: 4 PHPLVVN 10
PHPL+ +
Sbjct: 46 PHPLITS 52


>sp|RS4E_SACI7|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 3 GPHPL 7
GPHP+
Sbjct: 29 GPHPI 33


>sp|RS4E_SACI6|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 3 GPHPL 7
GPHP+
Sbjct: 29 GPHPI 33


>sp|RS4E_SACI4|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 3 GPHPL 7
GPHP+
Sbjct: 29 GPHPI 33


>sp|RS4E_SACI3|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 3 GPHPL 7
GPHP+
Sbjct: 29 GPHPI 33


>sp|RS4E_SACI2|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 3 GPHPL 7
GPHP+
Sbjct: 29 GPHPI 33


>sp|RS4E_SACI1|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 3 GPHPL 7
GPHP+
Sbjct: 29 GPHPI 33


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 PHPLV 8
PHPLV
Sbjct: 275 PHPLV 279


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 PHPLV 8
PHPLV
Sbjct: 263 PHPLV 267


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PHPLV 8
PHPLV
Sbjct: 275 PHPLV 279


>sp|Y1056_PYRAR|UPF0282 protein Pars_1056|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VGPHPLVV 9
+GPH LV+
Sbjct: 231 IGPHTLVL 238


>sp|PYRI_THEAC|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma acidophilum

Query: 1 VVGPHPLVV 9
+V HPLV+
Sbjct: 127 IVSKHPLVI 135




86|Sequence|426|435|PLVVNMYFAT

>sp|Y490_PYRAB|UPF0145 protein PYRAB04900|Pyrococcus abyssi (strain GE5 /

Query: 3 VVNMYFAT 10
VVNM FAT
Sbjct: 83 VVNMRFAT 90


>sp|NADM_METB6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 PLVVNMYF 8
PLVV ++F
Sbjct: 101 PLVVRLFF 108


>sp|Y992_IGNH4|MEMO1 family protein Igni_0992|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PLVVNMYF 8
P++VNMY
Sbjct: 240 PVMVNMYL 247


>sp|CSA5A_SACS2|CRISPR type I-A cluster 1/Apern-associated|Saccharolobus solfataricus

Query: 1 PLVVNMYFAT 10
PLVVN +AT
Sbjct: 119 PLVVNDKYAT 128




87|Sequence|431|440|MYFATGFSGH

>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MYFATGFSGH 10
+Y GFSGH
Sbjct: 568 VYTIEGFSGH 577


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 MYFATGFSGH 10
MY + GF H
Sbjct: 1286 MYISNGFMSH 1295


>sp|T2M5_METJA|TYPE II restriction enzyme MjaV|Methanocaldococcus jannaschii (strain

Query: 2 YFATGF 7
Y+ATGF
Sbjct: 189 YYATGF 194


>sp|Y1199_ARCFU|UNCHARACTERIZED protein AF_1199|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MYFATGFSGH 10
MY A+G GH
Sbjct: 163 MYVASGGFGH 172


>sp|Y1501_ARCFU|UNCHARACTERIZED protein AF_1501|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ATGFSGH 10
ATGF+G+
Sbjct: 26 ATGFTGY 32


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 6 GFSGH 10
GFSGH
Sbjct: 587 GFSGH 591


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 GFSGH 10
GFSGH
Sbjct: 590 GFSGH 594


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 6 GFSGH 10
GFSGH
Sbjct: 587 GFSGH 591


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 6 GFSGH 10
GFSGH
Sbjct: 575 GFSGH 579


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 6 GFSGH 10
GFSGH
Sbjct: 574 GFSGH 578


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 GFSGH 10
GFSGH
Sbjct: 576 GFSGH 580


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 6 GFSGH 10
GFSGH
Sbjct: 575 GFSGH 579


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 6 GFSGH 10
GFSGH
Sbjct: 584 GFSGH 588


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 2|Methanocaldococcus

Query: 1 MYFATGF 7
+YFA GF
Sbjct: 198 LYFALGF 204




88|Sequence|436|445|GFSGHGLQQA

>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFSGHGL 7
GFSGHGL
Sbjct: 412 GFSGHGL 418


>sp|KHK_HALVD|KETOHEXOKINASE volcanii (strain ATCC 29605

Query: 2 FSGHGLQQA 10
F+GHG+++A
Sbjct: 284 FAGHGIEEA 292


>sp|TRPB2_SULTO|TRYPTOPHAN synthase beta chain 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FSGHGL 7
FSGHGL
Sbjct: 411 FSGHGL 416


>sp|TRPB2_SACS2|TRYPTOPHAN synthase beta chain 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FSGHGL 7
FSGHGL
Sbjct: 411 FSGHGL 416


>sp|TRPB_THEVO|TRYPTOPHAN synthase beta chain|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FSGHGL 7
FSGHGL
Sbjct: 408 FSGHGL 413


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FSGHGL 7
FSGHGL
Sbjct: 406 FSGHGL 411


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 2 FSGHGL 7
FSGHGL
Sbjct: 410 FSGHGL 415


>sp|GGR2_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanopyrus kandleri (strain AV19 /

Query: 1 GFSGHGLQQA 10
G S HGL+ A
Sbjct: 46 GISAHGLEHA 55


>sp|COMC_METTH|L-SULFOLACTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GFSGHGL 7
GFS HG+
Sbjct: 40 GFSSHGI 46


>sp|AATC_THEVO|A-TYPE ATP synthase subunit C|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FSGHGLQQ 9
F GHGL++
Sbjct: 110 FLGHGLKE 117


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 1 GFSGHG 6
GFSGH
Sbjct: 587 GFSGHA 592


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GFSGHG 6
GFSGH
Sbjct: 590 GFSGHA 595


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 GFSGHG 6
GFSGH
Sbjct: 587 GFSGHA 592


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 1 GFSGH 5
GFSGH
Sbjct: 575 GFSGH 579


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 1 GFSGH 5
GFSGH
Sbjct: 574 GFSGH 578


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GFSGH 5
GFSGH
Sbjct: 576 GFSGH 580


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GFSGH 5
GFSGH
Sbjct: 573 GFSGH 577


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 1 GFSGH 5
GFSGH
Sbjct: 575 GFSGH 579


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 1 GFSGH 5
GFSGH
Sbjct: 584 GFSGH 588


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GFSGHGL 7
GF HGL
Sbjct: 79 GFDNHGL 85


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GFSGHGL 7
GF HGL
Sbjct: 79 GFDNHGL 85


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GFSGHGL 7
GF HGL
Sbjct: 79 GFDNHGL 85


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GFSGHGL 7
GF HGL
Sbjct: 79 GFDNHGL 85




89|Sequence|441|450|GLQQAPGIGR

>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LQQAPGIGR 10
L + PGIGR
Sbjct: 652 LVRVPGIGR 660


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LQQAPGIGR 10
L++ PGIGR
Sbjct: 41 LRKQPGIGR 49


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LQQAPGIGR 10
L APG+G+
Sbjct: 42 LHGAPGVGK 50


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LQQAPGIGR 10
L + PGIGR
Sbjct: 651 LVKIPGIGR 659


>sp|CYAS_METMA|CYSTEATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LQQAPGIGR 10
L+ PGIGR
Sbjct: 41 LRDQPGIGR 49


>sp|CYAS_METBF|CYSTEATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LQQAPGIGR 10
L+ PGIGR
Sbjct: 41 LRNQPGIGR 49




90|Sequence|446|455|PGIGRAVAEM

>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PGIGRAVAEM 10
PGIGRA A +
Sbjct: 656 PGIGRARARL 665


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 2 GIGRAVAEM 10
GIG AVAEM
Sbjct: 616 GIGVAVAEM 624


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PGIGRAVAEM 10
PGIGR A +
Sbjct: 655 PGIGRVRARL 664


>sp|SYFB_THEAC|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PGIGRAVA 8
PG GR+VA
Sbjct: 184 PGTGRSVA 191


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PGIGRAVAEM 10
P IGR AEM
Sbjct: 101 PEIGRKAAEM 110


>sp|RHAD_THEAC|L-RHAMNOSE 1-dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC

Query: 2 GIGRAVA 8
GIGRA+A
Sbjct: 17 GIGRAIA 23


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PGIGRAVAE 9
P GRAVAE
Sbjct: 154 PAAGRAVAE 162


>sp|RS24_PYRAR|SMALL ribosomal subunit protein eS24|Pyrobaculum arsenaticum (strain

Query: 2 GIGRAVAEM 10
GIG++VAE+
Sbjct: 64 GIGKSVAEV 72


>sp|FTSZ2_ARCFU|CELL division protein FtsZ 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGIGRAVAEM 10
P IGR AE+
Sbjct: 93 PEIGRKAAEL 102


>sp|Y078_THEAC|UPF0284 protein Ta0078|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PGIGRAVAE 9
PG+ RAV E
Sbjct: 122 PGLDRAVME 130


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 1 PGIGRAVAE 9
PG+ RAV E
Sbjct: 227 PGVVRAVVE 235


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 1 PGIGRAVAE 9
PG+ RAV E
Sbjct: 227 PGVVRAVVE 235


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 1 PGIGRAVAE 9
PG+ RAV E
Sbjct: 227 PGVVRAVVE 235


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 1 PGIGRAVAE 9
PG+ RAV E
Sbjct: 227 PGVVRAVVE 235


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 1 PGIGRAVAE 9
PG+ RAV E
Sbjct: 227 PGVVRAVVE 235


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 1 PGIGRAVAE 9
P GRAVAE
Sbjct: 152 PVAGRAVAE 160


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGIGRAVAEM 10
P +GR VAE+
Sbjct: 69 PRLGRGVAEV 78




91|Sequence|451|460|AVAEMVLKGR

>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 AVAEMVLKG 9
A++EMV+KG
Sbjct: 621 ALSEMVMKG 629


>sp|LEUC_PYRAE|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AVAEMVLKGR 10
AVA +LKGR
Sbjct: 304 AVAAKILKGR 313


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VAEMVLKGR 10
V E+VLKG+
Sbjct: 282 VVELVLKGQ 290




92|Sequence|456|465|VLKGRFQTID

>sp|T2M2_METJA|TYPE II restriction enzyme MjaII|Methanocaldococcus jannaschii (strain

Query: 1 VLKGRFQTI 9
VLK RF TI
Sbjct: 18 VLKSRFDTI 26


>sp|DHYS_AERPE|PROBABLE deoxyhypusine synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LKGRFQTID 10
LKGRF+ D
Sbjct: 99 LKGRFEADD 107


>sp|ASD_METKA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanopyrus kandleri

Query: 1 VLKGRFQ 7
+LKGRF+
Sbjct: 114 ILKGRFR 120


>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VLKGRFQT 8
+LKGR+ T
Sbjct: 404 ILKGRYDT 411


>sp|SYR_METKA|ARGININE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 KGRFQTID 10
KGR+ T+D
Sbjct: 400 KGRYVTLD 407


>sp|FEN_METBF|FLAP endonuclease 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 VLKGRFQTID 10
V +GR QT+D
Sbjct: 326 VSRGRQQTLD 335




93|Sequence|461|470|FQTIDLSPFL

>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 1 FQTIDLSPFL 10
+ TID+ PFL
Sbjct: 97 YHTIDIEPFL 106


>sp|DCDA_ARCFU|DIAMINOPIMELATE decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QTIDLSPFL 10
Q +DLSPF+
Sbjct: 198 QILDLSPFV 206


>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 1 FQTIDLSPFL 10
F+ +DLSP++
Sbjct: 9 FKQLDLSPYI 18


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 1 FQTIDLSPF 9
F +IDL PF
Sbjct: 118 FDSIDLDPF 126


>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FQTIDLSPF 9
F +DL PF
Sbjct: 125 FNVVDLDPF 133


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FQTIDLSPF 9
F +DL PF
Sbjct: 125 FNVVDLDPF 133


>sp|TRM1_METM7|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FQTIDLSPF 9
F +DL PF
Sbjct: 125 FNVVDLDPF 133


>sp|TRM1_METM6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FQTIDLSPF 9
F +DL PF
Sbjct: 125 FNVVDLDPF 133


>sp|TRM1_METM5|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FQTIDLSPF 9
F +DL PF
Sbjct: 125 FNVVDLDPF 133


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 1 FQTIDLSPF 9
F IDL PF
Sbjct: 135 FHFIDLDPF 143


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus (strain

Query: 1 FQTIDLSPF 9
F IDL PF
Sbjct: 134 FHFIDLDPF 142


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 1 FQTIDLSPF 9
F IDL PF
Sbjct: 132 FHFIDLDPF 140


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 1 FQTIDLSPF 9
F +DL PF
Sbjct: 118 FDAVDLDPF 126


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 1 FQTIDLSPF 9
F +DL PF
Sbjct: 128 FDVVDLDPF 136


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 1 FQTIDLSPFL 10
+ TID+ P L
Sbjct: 97 YHTIDIEPLL 106


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 1 FQTIDLSPFL 10
+ TID+ P L
Sbjct: 97 YHTIDIEPLL 106


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 1 FQTIDLSPFL 10
+ TID+ P L
Sbjct: 97 YHTIDIEPLL 106


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 1 FQTIDLSPF 9
F+ ID+ PF
Sbjct: 102 FEHIDIDPF 110


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 1 FQTIDLSPF 9
F +DL PF
Sbjct: 132 FNIVDLDPF 140


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 1 FQTIDLSPF 9
F ID+ PF
Sbjct: 121 FDVIDIDPF 129


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 1 FQTIDLSPF 9
F ID+ PF
Sbjct: 127 FDVIDIDPF 135


>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 1 FQTIDLSPF 9
+ T+D+ PF
Sbjct: 97 YHTLDIEPF 105


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 FQTIDLSPF 9
F +DL PF
Sbjct: 118 FDAVDLDPF 126


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 1 FQTIDLSPF 9
F IDL PF
Sbjct: 133 FDFIDLDPF 141


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QTIDLSPFL 10
Q D+SPF+
Sbjct: 218 QLTDISPFI 226


>sp|FLPA_THEAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma acidophilum (strain

Query: 2 QTIDLSPF 9
+ IDLSP+
Sbjct: 207 EVIDLSPY 214


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 2 QTIDLSPF 9
+ +DLSPF
Sbjct: 409 RNLDLSPF 416


>sp|TRM1_METJA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocaldococcus

Query: 1 FQTIDLSPF 9
F +D+ PF
Sbjct: 125 FNVVDIDPF 133


>sp|TRM1_META3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus aeolicus

Query: 1 FQTIDLSPF 9
F +D+ PF
Sbjct: 128 FNVVDIDPF 136


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 1 FQTIDLSPF 9
F +DL PF
Sbjct: 132 FDFVDLDPF 140


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 1 FQTIDLSPF 9
F +D+ PF
Sbjct: 124 FDVVDIDPF 132




94|Sequence|466|475|LSPFLFTRFY

>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 LSPFLFTRFY 10
L P+LF R Y
Sbjct: 940 LIPYLFDRLY 949


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LSPFLFTRFY 10
L PF++ R Y
Sbjct: 114 LVPFIYARLY 123


>sp|RRP41_METKA|EXOSOME complex component Rrp41|Methanopyrus kandleri (strain AV19 /

Query: 1 LSPFLFTRFY 10
L P +FT +Y
Sbjct: 107 LEPAIFTEYY 116


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSPFLFT 7
+SP+LFT
Sbjct: 174 VSPYLFT 180


>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LSPFLFTRF 9
L PF+FT++
Sbjct: 91 LIPFIFTKW 99


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LSPFLFTRF 9
L PF+FT++
Sbjct: 91 LIPFIFTKW 99




95|Sequence|471|480|FTRFYLGEKI

>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FTRFYLGEKI 10
F +FYLGE I
Sbjct: 280 FLKFYLGENI 289


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 FTRFYLGEK 9
F+R+YL EK
Sbjct: 1157 FSRYYLPEK 1165


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FTRFYLGEK 9
F+R+YL EK
Sbjct: 1135 FSRYYLPEK 1143


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FTRFYLGEK 9
F+R+YL EK
Sbjct: 970 FSRYYLPEK 978


>sp|Y042_METJA|UNCHARACTERIZED protein MJ0042|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RFYLGEK 9
R YLGEK
Sbjct: 179 RLYLGEK 185


>sp|OTC_HYPBU|ORNITHINE carbamoyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 RFYLGEKI 10
R+Y GE+I
Sbjct: 34 RYYAGERI 41


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 FTRFYLGEKI 10
F+R YL ++I
Sbjct: 883 FSRHYLSDRI 892


>sp|RL2_THEVO|LARGE ribosomal subunit protein uL2|Thermoplasma volcanium (strain ATCC

Query: 1 FTRFYLGEKI 10
FT Y+G+KI
Sbjct: 67 FTGAYVGQKI 76


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TRFYLG 7
T+FYLG
Sbjct: 230 TKFYLG 235


>sp|OTC_AERPE|ORNITHINE carbamoyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RFYLGEKI 10
R+Y GE++
Sbjct: 35 RYYAGERV 42


>sp|Y421_METJA|UNCHARACTERIZED protein MJ0421|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YLGEKI 10
YLGEKI
Sbjct: 176 YLGEKI 181


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TRFYLGEKI 10
TRF LG+++
Sbjct: 171 TRFKLGDEV 179


>sp|Y1398_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1398|Methanocaldococcus

Query: 4 FYLGEK 9
FY+GEK
Sbjct: 56 FYIGEK 61




96|Sequence|476|486|LGEKIQENNII

>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LGEKIQENNII 11
L EKIQEN+++
Sbjct: 424 LEEKIQENDVV 434


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LGEKIQENNII 11
LG+K+ E N+I
Sbjct: 284 LGDKVSEENVI 294


>sp|GATD_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EKIQENNII 11
EKIQE N+I
Sbjct: 62 EKIQEINVI 70


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGEKIQENNI 10
+ EK++ENNI
Sbjct: 520 VAEKLRENNI 529


>sp|VAPC4_METJA|RIBONUCLEASE VapC4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGEKIQENNI 10
L EK+ ENNI
Sbjct: 105 LKEKLMENNI 114


>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GEKIQENNII 11
GEKI+E ++I
Sbjct: 164 GEKIEEGDVI 173


>sp|CMR7B_SACS2|PUTATIVE CRISPR system CMR subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 EKIQENNII 11
EKIQ+N II
Sbjct: 158 EKIQQNTII 166


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 LGEKIQEN 8
LGE++QE+
Sbjct: 294 LGERLQEH 301


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LGEKIQEN 8
LGE++QE+
Sbjct: 294 LGERLQEH 301


>sp|Y3507_METJA|UNCHARACTERIZED protein MJECL07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGEKIQENNI 10
+ EK++ENNI
Sbjct: 253 ITEKLKENNI 262


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 GEKIQE 7
GEKIQE
Sbjct: 20 GEKIQE 25


>sp|RL10_IGNH4|LARGE ribosomal subunit protein uL10|Ignicoccus hospitalis (strain

Query: 3 EKIQENNII 11
EK++EN+++
Sbjct: 29 EKLKENDVV 37


>sp|CFBA_METJA|SIROHYDROCHLORIN cobaltochelatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGEKIQENNI 10
L EK++E N+
Sbjct: 23 LAEKVKERNL 32


>sp|RPO1C_META3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus aeolicus (strain ATCC

Query: 1 LGEKIQENNII 11
+ EKI++ NII
Sbjct: 28 ISEKIEDENII 38


>sp|ASD_METJA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanocaldococcus

Query: 3 EKIQENNII 11
EKI E NI+
Sbjct: 119 EKINERNIV 127


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LGEKIQENNII 11
+G+K ENNI+
Sbjct: 568 IGDKEVENNIL 578






THE END