FRIL_HUMAN Blast OutputR
HumanVirus
1|SequenceR|10|1|SYNQRIQSSM

>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)

Query: 2 YNQRIQSSM 10
Y QR+Q S+
Sbjct: 322 YEQRVQVSL 330


>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 YNQRIQSSM 10
Y QR+Q S+
Sbjct: 322 YEQRVQVSL 330


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 SYNQRIQSSM 10
SYN +QS +
Sbjct: 2933 SYNSTLQSGL 2942


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 SYNQRIQSSM 10
SYN +QS +
Sbjct: 2933 SYNSTLQSGL 2942


>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4

Query: 2 YNQRIQ 7
YN+R+Q
Sbjct: 271 YNRRVQ 276


>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65

Query: 2 YNQRIQ 7
YN+R+Q
Sbjct: 268 YNRRVQ 273




2|SequenceR|15|6|AEVDTSYNQR

>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 EVDTSYN 8
+ DTSYN
Sbjct: 247 QTDTSYN 253


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 2 EVDTSYN 8
+ DTSYN
Sbjct: 247 QTDTSYN 253


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 3 VDTSYNQ 9
VD++YN+
Sbjct: 2477 VDSTYNE 2483


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 2 EVDTSYNQ 9
E+DT+Y++
Sbjct: 371 EIDTNYSE 378


>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka

Query: 4 DTSYNQR 10
DT+YN R
Sbjct: 65 DTAYNPR 71


>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)

Query: 4 DTSYNQR 10
DT+YN R
Sbjct: 65 DTAYNPR 71


>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36

Query: 5 TSYNQR 10
+SYNQR
Sbjct: 481 SSYNQR 486




3|SequenceR|20|11|LSNVAAEVDT

***** No hits found ******


4|SequenceR|25|16|LYLNVLSNVA

>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain

Query: 4 NVLSNVA 10
NVLSN+A
Sbjct: 338 NVLSNIA 344


>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain

Query: 4 NVLSNVA 10
NVLSN+A
Sbjct: 338 NVLSNIA 344


>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)

Query: 3 LNVLSNV 9
LN+LSN+
Sbjct: 630 LNILSNI 636


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 YLNVLSN 8
+LNVL+N
Sbjct: 1358 HLNVLTN 1364


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 YLNVLSN 8
+LNVL+N
Sbjct: 1358 HLNVLTN 1364


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 2 YLNVLS 7
YLNVLS
Sbjct: 330 YLNVLS 335


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 3 LNVLSN 8
LN+LSN
Sbjct: 352 LNILSN 357




5|SequenceR|30|21|TYSAQLYLNV

>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 2 YSAQLYL 8
YSAQLY+
Sbjct: 1774 YSAQLYM 1780


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 TYSAQLYLNV 10
+YS QLY V
Sbjct: 30 SYSKQLYATV 39


>sp|NS3_CVHNL|NON-STRUCTURAL protein 3|Human coronavirus NL63 (HCoV-NL63)

Query: 1 TYSAQLYLNV 10
YS+QLY +V
Sbjct: 212 VYSSQLYEDV 221




6|SequenceR|35|26|GLSLYTYSAQ

>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 2 LSLYTYSA 9
LSLY Y+A
Sbjct: 177 LSLYGYNA 184


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 GLSLYTYSAQ 10
GL++Y Y+A+
Sbjct: 5678 GLAVYYYTAR 5687


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 2 LSLYTYSA 9
LSLY Y+A
Sbjct: 177 LSLYGYNA 184


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 GLSLYTYSAQ 10
GL++Y Y+A+
Sbjct: 5628 GLAVYYYTAR 5637


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 GLSLYTYSAQ 10
GL++Y Y+A+
Sbjct: 5648 GLAVYYYTAR 5657


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 4 LYTYSAQ 10
LY YS Q
Sbjct: 1963 LYVYSGQ 1969


>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)

Query: 2 LSLYTYS 8
+S+YT+S
Sbjct: 608 ISMYTFS 614


>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 2 LSLYTYS 8
+S+YT+S
Sbjct: 609 ISMYTFS 615


>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 2 LSLYTYS 8
+S+YT+S
Sbjct: 609 ISMYTFS 615


>sp|AGNO_POVJC|AGNOPROTEIN polyomavirus (JCPyV) (JCV)

Query: 1 GLSLYTYSA 9
GL+ TYSA
Sbjct: 56 GLTEQTYSA 64




7|SequenceR|40|31|RDFYFGLSLY

>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)

Query: 1 RDFYFGLS 8
+DFYFG +
Sbjct: 262 QDFYFGFN 269


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 1 RDFYF 5
RDFYF
Sbjct: 246 RDFYF 250


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 1 RDFYF 5
RDFYF
Sbjct: 246 RDFYF 250


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 1 RDFYF 5
RDFYF
Sbjct: 237 RDFYF 241


>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 1 RDFYF 5
RDFYF
Sbjct: 110 RDFYF 114


>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 RDFYFGLS 8
RDF+ G+S
Sbjct: 85 RDFFRGIS 92


>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 RDFYFGLS 8
RDF+ G+S
Sbjct: 85 RDFFRGIS 92


>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 RDFYFGL 7
R+FY+G
Sbjct: 152 RNFYYGF 158


>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 RDFYFGL 7
R+FY+G
Sbjct: 152 RNFYYGF 158


>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59

Query: 4 YFGLSL 9
YFG+SL
Sbjct: 479 YFGMSL 484


>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58

Query: 4 YFGLSL 9
YFG+SL
Sbjct: 478 YFGMSL 483


>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52

Query: 4 YFGLSL 9
YFG+SL
Sbjct: 481 YFGMSL 486


>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33

Query: 4 YFGLSL 9
YFG+SL
Sbjct: 478 YFGMSL 483


>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31

Query: 4 YFGLSL 9
YFG+SL
Sbjct: 465 YFGMSL 470


>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 FYFGLSLY 10
FY GLS++
Sbjct: 512 FYTGLSVW 519


>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 FYFGLSLY 10
FY GLS++
Sbjct: 512 FYTGLSVW 519


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1 RDFYFGLS 8
RDF GLS
Sbjct: 294 RDFVEGLS 301


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 RDFYFGLS 8
RDF GLS
Sbjct: 289 RDFVEGLS 296


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 RDFYFGLS 8
RDF GLS
Sbjct: 289 RDFVEGLS 296


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 RDFYFGLS 8
RDF GLS
Sbjct: 289 RDFVEGLS 296


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 RDFYFGLS 8
RDF GLS
Sbjct: 289 RDFVEGLS 296


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 RDFYFGLS 8
RDF GLS
Sbjct: 289 RDFVEGLS 296


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 RDFYFGLS 8
RDF GLS
Sbjct: 289 RDFVEGLS 296


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 RDFYFGLS 8
RDF GLS
Sbjct: 289 RDFVEGLS 296


>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 RDFYFGLS 8
RDF GLS
Sbjct: 289 RDFVEGLS 296


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 RDFYFGLS 8
RDF GLS
Sbjct: 289 RDFVEGLS 296


>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 RDFYFGLS 8
RDF GLS
Sbjct: 289 RDFVEGLS 296


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 RDFYFGLS 8
RDF GLS
Sbjct: 301 RDFVEGLS 308


>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 YFGLSLY 10
YFG +LY
Sbjct: 453 YFGKTLY 459


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 YFGLSLY 10
YFG +LY
Sbjct: 453 YFGKTLY 459


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 3 FYFGLSLY 10
FYF ++LY
Sbjct: 3182 FYFYVTLY 3189


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 3 FYFGLSLY 10
FYF ++LY
Sbjct: 3152 FYFYVTLY 3159


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 3 FYFGLSLY 10
FYF ++LY
Sbjct: 3132 FYFYVTLY 3139


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3 FYFGLSLY 10
FYF ++LY
Sbjct: 3182 FYFYVTLY 3189


>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 372 WYWGPSLY 379


>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 372 WYWGPSLY 379


>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 372 WYWGPSLY 379


>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 362 WYWGPSLY 369


>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 362 WYWGPSLY 369


>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 362 WYWGPSLY 369


>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 362 WYWGPSLY 369


>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 362 WYWGPSLY 369


>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 362 WYWGPSLY 369


>sp|HBSAG_HBVCJ|LARGE envelope protein|Hepatitis B virus genotype C

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVC8|LARGE envelope protein|Hepatitis B virus genotype C

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 362 WYWGPSLY 369


>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVC6|SMALL envelope protein|Hepatitis B virus genotype C

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 199 WYWGPSLY 206


>sp|HBSAG_HBVC5|LARGE envelope protein|Hepatitis B virus genotype C

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVC4|LARGE envelope protein|Hepatitis B virus genotype C

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVC3|LARGE envelope protein|Hepatitis B virus genotype C

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVC2|LARGE envelope protein|Hepatitis B virus genotype C

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVC1|LARGE envelope protein|Hepatitis B virus genotype C

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 362 WYWGPSLY 369


>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 362 WYWGPSLY 369


>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 362 WYWGPSLY 369


>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 3 FYFGLSLY 10
+Y+G SLY
Sbjct: 373 WYWGPSLY 380


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3 FYFGLSLY 10
FYF ++LY
Sbjct: 3132 FYFYVTLY 3139


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3 FYFGLSLY 10
FYF ++LY
Sbjct: 3152 FYFYVTLY 3159


>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus

Query: 1 RDFYFGLS 8
+D Y G+S
Sbjct: 18 KDIYLGIS 25


>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 RDFYFGLS 8
+D Y G+S
Sbjct: 18 KDIYLGIS 25


>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 RDFYFGLS 8
+D Y G+S
Sbjct: 18 KDIYLGIS 25


>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)

Query: 1 RDFYFGLS 8
+D Y G+S
Sbjct: 18 KDIYLGIS 25


>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)

Query: 1 RDFYFGLS 8
+D Y G+S
Sbjct: 18 KDIYLGIS 25




8|SequenceR|45|36|LAVDDRDFYF

>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 AVDDRDFY 9
AV+D DF+
Sbjct: 2914 AVEDEDFW 2921


>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P

Query: 2 AVDDRDF 8
VDDRD
Sbjct: 19 GVDDRDL 25


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 2 AVDDRDFYF 10
A DD DF +
Sbjct: 472 ACDDSDFKY 480


>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P

Query: 1 LAVDDRDFYF 10
LAVDD Y
Sbjct: 99 LAVDDEGCYL 108


>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 DRDFYF 10
D+D YF
Sbjct: 59 DKDIYF 64


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 2 AVDDRDF 8
AVD++DF
Sbjct: 494 AVDNKDF 500


>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)

Query: 4 DDRDFYF 10
+D DFY
Sbjct: 77 EDEDFYL 83


>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United

Query: 1 LAVDDRDF 8
L +DDR+F
Sbjct: 184 LLLDDRNF 191


>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])

Query: 1 LAVDDRDF 8
L +DDR+F
Sbjct: 184 LLLDDRNF 191


>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)

Query: 4 DDRDFY 9
DD DF+
Sbjct: 390 DDEDFF 395




9|SequenceR|50|41|HSVGELAVDD

>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 HSVGELAVDD 10
HS+GE+ V D
Sbjct: 138 HSIGEMTVTD 147


>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P

Query: 2 SVGELAVDD 10
+VGE+ VDD
Sbjct: 119 AVGEITVDD 127


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 1 HSVGELAVDD 10
HS+GE++ D
Sbjct: 138 HSMGEMSFAD 147


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 1 HSVGELAV 8
H +GELA+
Sbjct: 1230 HLIGELAI 1237


>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus

Query: 2 SVGELAVDD 10
+VGE+ +D+
Sbjct: 282 NVGEMPIDE 290


>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 SVGELAVDD 10
+VGE+ +D+
Sbjct: 282 NVGEMPIDE 290


>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 SVGELAVDD 10
+VGE+ +D+
Sbjct: 282 NVGEMPIDE 290


>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)

Query: 2 SVGELAVDD 10
+VGE+ +D+
Sbjct: 282 NVGEMPIDE 290


>sp|VP40_MABVR|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ravn-87)

Query: 3 VGELAVDD 10
VG+L +DD
Sbjct: 44 VGDLNLDD 51


>sp|VP40_MABVP|MATRIX protein VP40|Lake Victoria marburgvirus (strain Popp-67)

Query: 3 VGELAVDD 10
VG+L +DD
Sbjct: 44 VGDLNLDD 51


>sp|VP40_MABVO|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 3 VGELAVDD 10
VG+L +DD
Sbjct: 44 VGDLNLDD 51


>sp|VP40_MABVM|MATRIX protein VP40|Lake Victoria marburgvirus (strain Musoke-80)

Query: 3 VGELAVDD 10
VG+L +DD
Sbjct: 44 VGDLNLDD 51


>sp|VP40_MABVA|MATRIX protein VP40|Lake Victoria marburgvirus (strain Angola/2005)

Query: 3 VGELAVDD 10
VG+L +DD
Sbjct: 44 VGDLNLDD 51


>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)

Query: 4 GELAVD 9
GE+AVD
Sbjct: 160 GEIAVD 165


>sp|NSP3_ROTH7|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United

Query: 4 GELAVDD 10
GE+ VDD
Sbjct: 147 GEVEVDD 153


>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate

Query: 4 GELAVDD 10
GE+ VDD
Sbjct: 150 GEVEVDD 156


>sp|NSP3_ROTHT|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 4 GELAVDD 10
GE+ VDD
Sbjct: 150 GEVEVDD 156


>sp|NSP3_ROTWI|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United

Query: 4 GELAVDD 10
GE+ VDD
Sbjct: 150 GEVEVDD 156


>sp|NSP3_ROTHS|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])

Query: 4 GELAVDD 10
GE+ VDD
Sbjct: 150 GEVEVDD 156


>sp|NSP3_ROTHW|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 4 GELAVDD 10
GE+ VDD
Sbjct: 150 GEVEVDD 156


>sp|NSP3_ROTHD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 4 GELAVDD 10
GE+ VDD
Sbjct: 150 GEVEVDD 156


>sp|NSP3_ROTAD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 4 GELAVDD 10
GE+ VDD
Sbjct: 147 GEVEVDD 153


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 HSVGELAVDD 10
HSV L +D+
Sbjct: 777 HSVDTLYIDE 786


>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 4 GELAVDD 10
GE+ VDD
Sbjct: 150 GEVEVDD 156


>sp|NSP3_ROTAM|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 4 GELAVDD 10
GE+ VDD
Sbjct: 147 GEVEVDD 153


>sp|NSP3_ROTH6|NON-STRUCTURAL protein 3|Rotavirus A (strain

Query: 4 GELAVDD 10
GE+ VDD
Sbjct: 150 GEVEVDD 156


>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain

Query: 4 GELAVDD 10
GE+ VDD
Sbjct: 150 GEVEVDD 156




10|SequenceR|55|46|LERFFHSVGE

>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 FFHSVGE 10
FFH VGE
Sbjct: 405 FFHPVGE 411


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 4 FFHSVG 9
FFHS+G
Sbjct: 166 FFHSLG 171


>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4 FFHSVGE 10
FFH VG+
Sbjct: 405 FFHPVGD 411


>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)

Query: 1 LERFFHS 7
L RFFH+
Sbjct: 153 LSRFFHA 159


>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)

Query: 1 LERFFHS 7
L RFFH+
Sbjct: 153 LSRFFHA 159


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 4 FFHSVG 9
F+HS+G
Sbjct: 166 FYHSLG 171




11|SequenceR|60|51|RKEEALERFF

>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 4 EALERF 9
EALERF
Sbjct: 2681 EALERF 2686


>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)

Query: 3 EEALERFF 10
E ALER F
Sbjct: 340 EAALERLF 347


>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)

Query: 3 EEALERFF 10
E ALER F
Sbjct: 339 EPALERLF 346


>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)

Query: 3 EEALERFF 10
E ALER F
Sbjct: 339 EPALERLF 346


>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)

Query: 3 EEALERFF 10
E ALER F
Sbjct: 340 EAALERLF 347


>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)

Query: 4 EALERFF 10
EAL RFF
Sbjct: 151 EALSRFF 157


>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)

Query: 4 EALERFF 10
EAL RFF
Sbjct: 151 EALSRFF 157


>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4

Query: 1 RKEEALERFF 10
R +EAL RF
Sbjct: 165 RNQEALYRFL 174


>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 1 RKEEALERF 9
R EAL+RF
Sbjct: 184 RVSEALQRF 192


>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 1 RKEEALERF 9
R EAL+RF
Sbjct: 171 RVSEALQRF 179


>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1

Query: 1 RKEEALERFF 10
+ EALER++
Sbjct: 695 QTREALERYY 704


>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P

Query: 4 EALERFF 10
EA+E++F
Sbjct: 340 EAMEKYF 346


>sp|RUVV_VARV|RESOLVASE OPG149|Variola virus

Query: 1 RKEEALERFF 10
RK+ ++E FF
Sbjct: 123 RKKRSVEAFF 132


>sp|RUVV_VAR67|RESOLVASE OPG149|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 RKEEALERFF 10
RK+ ++E FF
Sbjct: 123 RKKRSVEAFF 132




12|SequenceR|65|56|REYGERKEEA

>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)

Query: 4 GERKEEA 10
G RKEEA
Sbjct: 14 GRRKEEA 20


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 4 GERKEE 9
GER+EE
Sbjct: 1665 GERQEE 1670


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 REYGER 6
R YGER
Sbjct: 155 RTYGER 160


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 4 GERKEE 9
GE+KEE
Sbjct: 1666 GEKKEE 1671


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 4 GERKEE 9
GER+EE
Sbjct: 1665 GERQEE 1670


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 4 GERKEE 9
GER+EE
Sbjct: 1671 GEREEE 1676


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 REYGERKE 8
R+YG R+E
Sbjct: 1439 RDYGGRRE 1446




13|SequenceR|70|61|QMKLLREYGE

>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 3 KLLREYGE 10
+LLREYG+
Sbjct: 819 QLLREYGQ 826


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 QMKLLREYGE 10
+ K++REYG+
Sbjct: 1410 KAKIIREYGK 1419


>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)

Query: 1 QMKLLREYG 9
Q LLR+YG
Sbjct: 122 QPILLRQYG 130


>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)

Query: 1 QMKLLREYG 9
Q LLR+YG
Sbjct: 122 QPILLRQYG 130


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 5 LREYGE 10
L+EYGE
Sbjct: 3161 LKEYGE 3166


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 QMKLLREYG 9
Q LLR+YG
Sbjct: 141 QNILLRKYG 149


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related

Query: 1 QMKLLREYG 9
Q LLR+YG
Sbjct: 141 QNILLRKYG 149


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 4 LLREYGE 10
LLREY +
Sbjct: 37 LLREYSD 43


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 LLREYGE 10
LLREY +
Sbjct: 37 LLREYSD 43


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 QMKLLREYGE 10
+ K+L++YG+
Sbjct: 1411 KAKILKDYGK 1420




14|SequenceR|75|66|GGRQNQMKLL

>sp|ST_POVKI|SMALL t antigen|KI polyomavirus (isolate Stockholm 350)

Query: 1 GGRQNQMKLL 10
GG + MKLL
Sbjct: 46 GGNEESMKLL 55


>sp|ST_POVK6|SMALL t antigen|KI polyomavirus (isolate Stockholm 60)

Query: 1 GGRQNQMKLL 10
GG + MKLL
Sbjct: 46 GGNEESMKLL 55


>sp|ST_POVK3|SMALL t antigen|KI polyomavirus (isolate Stockholm 380)

Query: 1 GGRQNQMKLL 10
GG + MKLL
Sbjct: 46 GGNEESMKLL 55


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 1 GGRQNQMKLL 10
GG + MKLL
Sbjct: 46 GGNEESMKLL 55


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 1 GGRQNQMKLL 10
GG + MKLL
Sbjct: 46 GGNEESMKLL 55


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 1 GGRQNQMKLL 10
GG + MKLL
Sbjct: 46 GGNEESMKLL 55


>sp|ST_POVWU|SMALL t antigen|WU polyomavirus (WUPyV)

Query: 1 GGRQNQMKLL 10
GG + +MK L
Sbjct: 46 GGNEEKMKKL 55




15|SequenceR|80|71|QFLARGGRQN

>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 QFLARGGR 8
+ LARGGR
Sbjct: 2930 RLLARGGR 2937


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 FLARGGR 8
LARGGR
Sbjct: 870 LLARGGR 876


>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 1 QFLARGG 7
QF+ RGG
Sbjct: 763 QFIQRGG 769


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 1 QFLARGG 7
QF+ RGG
Sbjct: 763 QFIQRGG 769


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 1 QFLARGG 7
QF+ RGG
Sbjct: 763 QFIQRGG 769


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 QFLARGG 7
QF+ RGG
Sbjct: 763 QFIQRGG 769


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 QFLARGG 7
QF+ RGG
Sbjct: 755 QFIQRGG 761


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 1 QFLARGG 7
QF+ RGG
Sbjct: 763 QFIQRGG 769


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 1 QFLARGG 7
QF+ RGG
Sbjct: 763 QFIQRGG 769


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 1 QFLARGG 7
QF+ RGG
Sbjct: 763 QFIQRGG 769


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 1 QFLARGG 7
QF+ RGG
Sbjct: 763 QFIQRGG 769


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 QFLARGGR 8
+ LARGG+
Sbjct: 2930 RLLARGGK 2937


>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3 LARGGRQN 10
+ARGG N
Sbjct: 26 IARGGNSN 33


>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3 LARGGRQN 10
+ARGG N
Sbjct: 26 IARGGNSN 33


>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 3 LARGGRQN 10
+ARGG N
Sbjct: 26 IARGGNSN 33


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 FLARGGR 8
FLAR G+
Sbjct: 204 FLARAGK 210


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 FLARGGR 8
FLAR G+
Sbjct: 204 FLARAGK 210


>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)

Query: 2 FLARGG 7
+LARGG
Sbjct: 447 YLARGG 452


>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 FLARGG 7
+LARGG
Sbjct: 447 YLARGG 452


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 4 ARGGRQN 10
ARG R+N
Sbjct: 294 ARGARRN 300


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 ARGGRQN 10
ARG R+N
Sbjct: 294 ARGARRN 300




16|SequenceR|85|76|PKKIDQFLAR

>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor

Query: 1 PKKIDQFLAR 10
PK D F++R
Sbjct: 26 PKSYDDFISR 35


>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor

Query: 1 PKKIDQFLAR 10
PK D F++R
Sbjct: 26 PKSYDDFISR 35


>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)

Query: 1 PKKIDQFLAR 10
P+KI++FL +
Sbjct: 233 PEKIEEFLIK 242


>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor

Query: 1 PKKIDQFLAR 10
PK D F++R
Sbjct: 26 PKSYDDFISR 35


>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor

Query: 1 PKKIDQFLAR 10
PK D F++R
Sbjct: 26 PKSYDDFISR 35


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 5 DQFLAR 10
D+FLAR
Sbjct: 1095 DEFLAR 1100


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5 DQFLAR 10
D+FLAR
Sbjct: 1095 DEFLAR 1100


>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin

Query: 2 KKIDQFLA 9
++ID FLA
Sbjct: 234 ERIDDFLA 241




17|SequenceR|90|81|WEDEAPKKID

>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 1 WEDEAPKKI 9
W D PKKI
Sbjct: 76 WHDCRPKKI 84


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 1 WEDEAPKKI 9
W D PKKI
Sbjct: 76 WHDCRPKKI 84


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 1 WEDEAPKKI 9
W D PKKI
Sbjct: 76 WHDCRPKKI 84


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 WEDEAPKK 8
WED +PK+
Sbjct: 135 WEDFSPKE 142


>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1 WEDEAPKKI 9
W DE P +
Sbjct: 191 WTDETPSNL 199


>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)

Query: 2 EDEAP 6
EDEAP
Sbjct: 464 EDEAP 468


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 4 EAPKKID 10
E PKK+D
Sbjct: 459 EMPKKLD 465


>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 WEDEAP 6
W DE P
Sbjct: 191 WTDETP 196


>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 349 ENMAPEKVD 357


>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 365 ENMAPEKVD 373


>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 365 ENMAPEKVD 373


>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 368 ENMAPEKVD 376


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 2 EDEAPKKID 10
E+ AP+K+D
Sbjct: 372 ENMAPEKVD 380


>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 WEDEAP 6
W DE P
Sbjct: 191 WTDETP 196


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 1 WEDEAP 6
W DE P
Sbjct: 1390 WGDEVP 1395


>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1

Query: 1 WEDEAPKK 8
WE E P +
Sbjct: 16 WEQEEPTQ 23


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 1 WEDEAP 6
W DE P
Sbjct: 1393 WGDEVP 1398


>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 1 WEDEAP 6
+EDEAP
Sbjct: 175 FEDEAP 180


>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann

Query: 1 WEDEAP 6
+EDEAP
Sbjct: 175 FEDEAP 180


>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)

Query: 1 WEDEAP 6
+EDEAP
Sbjct: 175 FEDEAP 180


>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)

Query: 1 WEDEAP 6
+EDEAP
Sbjct: 175 FEDEAP 180


>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 WEDEAPK 7
W+ E PK
Sbjct: 254 WKPELPK 260


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 6 PKKID 10
PKK+D
Sbjct: 528 PKKVD 532


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 6 PKKID 10
PKK+D
Sbjct: 528 PKKVD 532


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 6 PKKID 10
PKK+D
Sbjct: 528 PKKVD 532




18|SequenceR|95|86|DPTKGWEDEA

>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PTKGWEDEA 10
PT GW D A
Sbjct: 18 PTPGWHDAA 26


>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PTKGWEDEA 10
PT GW D A
Sbjct: 18 PTPGWHDAA 26


>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3

Query: 1 DPTKGWEDEA 10
D T GWE +A
Sbjct: 427 DDTNGWEKDA 436


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 DPTKGWED 8
+P+KGW D
Sbjct: 3187 EPSKGWND 3194


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 DPTKGWED 8
+P+KGW D
Sbjct: 3187 EPSKGWND 3194


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 DPTKGWED 8
+P+KGW D
Sbjct: 3186 EPSKGWND 3193


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3185 QPSKGWHD 3192


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3185 QPSKGWHD 3192


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3185 QPSKGWHD 3192


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3185 QPSKGWHD 3192


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3185 QPSKGWHD 3192


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3205 QPSKGWND 3212


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3205 QPSKGWND 3212


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3205 QPSKGWND 3212


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3205 QPSKGWND 3212


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3205 QPSKGWND 3212


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3205 QPSKGWND 3212


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3206 QPSKGWTD 3213


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1 DPTKGWED 8
P+KGW D
Sbjct: 3206 QPSKGWTD 3213


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DPTKGWED 8
+P+KGW++
Sbjct: 3183 EPSKGWKN 3190


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DPTKGWED 8
+P+KGW++
Sbjct: 3183 EPSKGWKN 3190


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DPTKGWED 8
+P+KGW++
Sbjct: 3183 EPSKGWKN 3190


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DPTKGWED 8
+P+KGW++
Sbjct: 3183 EPSKGWKN 3190


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DPTKGWED 8
+P+KGW++
Sbjct: 3183 EPSKGWKN 3190


>sp|K6_HHV8P|PROTEIN K6|Human herpesvirus 8 type P

Query: 1 DPTKGW 6
DP+K W
Sbjct: 78 DPSKNW 83


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 2 PTKGWED 8
P+KGW++
Sbjct: 3206 PSKGWKN 3212


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DPTKGWED 8
DP K W++
Sbjct: 1957 DPDKQWDE 1964


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 1 DPTKGWEDEA 10
DP GW E
Sbjct: 583 DPPAGWVREG 592


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 PTKGWEDE 9
PT+ W D+
Sbjct: 627 PTRQWVDQ 634


>sp|VEGFH_ORFN2|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ2) (OV

Query: 3 TKGWED 8
TKGW +
Sbjct: 24 TKGWSE 29


>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate

Query: 1 DPTKGW 6
DPTKG+
Sbjct: 514 DPTKGF 519


>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus

Query: 1 DPTKGW 6
DPTKG+
Sbjct: 514 DPTKGF 519


>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)

Query: 1 DPTKGW 6
DPTKG+
Sbjct: 514 DPTKGF 519


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 3 TKGWE 7
T+GWE
Sbjct: 766 TRGWE 770


>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain

Query: 1 DPTKGW 6
DPTKG+
Sbjct: 514 DPTKGF 519


>sp|YVBH_VACCC|UNCHARACTERIZED 7.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 DPTKGW 6
DP+ GW
Sbjct: 3 DPSTGW 8


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3 TKGWED 8
+KGW D
Sbjct: 4196 SKGWYD 4201


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DPTKGWEDE 9
DP + EDE
Sbjct: 2257 DPIRAVEDE 2265


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 6 WEDEA 10
WEDEA
Sbjct: 493 WEDEA 497


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 6 WEDEA 10
WEDEA
Sbjct: 493 WEDEA 497


>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain

Query: 1 DPTKGWEDE 9
DPT+G DE
Sbjct: 281 DPTEGSMDE 289


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DPTKGWEDE 9
DP + EDE
Sbjct: 2257 DPLRAEEDE 2265


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DPTKGWEDE 9
DP + EDE
Sbjct: 2257 DPLRAEEDE 2265


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DPTKGWEDE 9
DP + EDE
Sbjct: 2257 DPLRAEEDE 2265


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DPTKGWEDE 9
DP + EDE
Sbjct: 2257 DPLRAEEDE 2265


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DPTKGWED 8
DP + W++
Sbjct: 1959 DPDRQWDE 1966


>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PTKGW 6
P KGW
Sbjct: 69 PPKGW 73


>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PTKGW 6
P KGW
Sbjct: 69 PPKGW 73


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DPTKGWED 8
DP + W++
Sbjct: 1959 DPDRQWDE 1966


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DPTKGWED 8
DP + W++
Sbjct: 1793 DPDRQWDE 1800


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DPTKGWED 8
DP + W++
Sbjct: 1959 DPDRQWDE 1966


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DPTKGWED 8
DP + W++
Sbjct: 1959 DPDRQWDE 1966


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DPTKGWED 8
DP + W++
Sbjct: 1959 DPDRQWDE 1966


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 PTKGW 6
PT GW
Sbjct: 546 PTGGW 550


>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain

Query: 5 GWEDE 9
GW DE
Sbjct: 398 GWNDE 402


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 PTKGW 6
PT GW
Sbjct: 545 PTGGW 549




19|SequenceR|100|91|AAKMADPTKG

>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 4 MADPTKG 10
MADP KG
Sbjct: 1 MADPNKG 7


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 4 MADPTKG 10
+A+PTKG
Sbjct: 1695 LAEPTKG 1701


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 1 AAKMADPTKG 10
AK+ DPT G
Sbjct: 698 GAKVLDPTSG 707


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 4 MADPTKG 10
M DPT G
Sbjct: 65 MVDPTNG 71


>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 4 MADPTKG 10
M DPT G
Sbjct: 65 MVDPTNG 71


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 4 MADPTKG 10
M DPT G
Sbjct: 65 MVDPTNG 71


>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 4 MADPTKG 10
M DPT G
Sbjct: 65 MVDPTNG 71


>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)

Query: 6 DPTKG 10
DPTKG
Sbjct: 514 DPTKG 518


>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate

Query: 6 DPTKG 10
DPTKG
Sbjct: 514 DPTKG 518


>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain

Query: 6 DPTKG 10
DPTKG
Sbjct: 514 DPTKG 518


>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus

Query: 6 DPTKG 10
DPTKG
Sbjct: 514 DPTKG 518


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 1 AAKMADPTKG 10
A++ DPT G
Sbjct: 698 GARVLDPTSG 707


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 1 AAKMADPTKG 10
A++ DPT G
Sbjct: 698 GARVLDPTSG 707


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 1 AAKMADPTKG 10
A++ DPT G
Sbjct: 698 GARVLDPTSG 707


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 1 AAKMADPTKG 10
A++ DPT G
Sbjct: 703 GARVLDPTSG 712


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 1 AAKMADPTKG 10
A++ DPT G
Sbjct: 703 GARVLDPTSG 712


>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)

Query: 4 MADPT 8
MADPT
Sbjct: 1 MADPT 5


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 6 DPTKG 10
DPTKG
Sbjct: 2590 DPTKG 2594


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1 AAKMADPTK 9
A ++ADP K
Sbjct: 2319 ACRVADPLK 2327


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 6 DPTKG 10
DPTKG
Sbjct: 2590 DPTKG 2594


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 6 DPTKG 10
DPTKG
Sbjct: 2594 DPTKG 2598


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1 AAKMADPTK 9
A ++ADP K
Sbjct: 2421 ACRVADPLK 2429


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 1 AAKMADPTK 9
A ++ADP K
Sbjct: 2423 ACRVADPLK 2431


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 6 DPTKG 10
DPTKG
Sbjct: 2590 DPTKG 2594


>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)

Query: 1 AAKMADPTK 9
A ++ADP K
Sbjct: 1057 ACRVADPLK 1065


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1 AAKMADPTK 9
A ++ADP K
Sbjct: 2345 ACRIADPLK 2353


>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)

Query: 3 KMADPTK 9
KMADP +
Sbjct: 35 KMADPNR 41


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 AAKMADPTK 9
A ++ADP K
Sbjct: 2385 ACRVADPLK 2393




20|SequenceR|105|96|KELAMAAKMA

***** No hits found ******


21|SequenceR|110|101|AQNLKKELAM

>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1 AQNLKKEL 8
AQN+KK++
Sbjct: 1618 AQNVKKDI 1625




22|SequenceR|115|106|HLDLLAQNLK

>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)

Query: 1 HLDLLAQNL 9
H+DLLA L
Sbjct: 751 HMDLLASGL 759


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 2 LDLLAQNL 9
LDL AQNL
Sbjct: 2105 LDLEAQNL 2112


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 2 LDLLAQNLK 10
+D+L+QN K
Sbjct: 997 MDVLSQNQK 1005


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 HLDLLAQN 8
HL L AQN
Sbjct: 2110 HLTLRAQN 2117


>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5

Query: 2 LDLLAQ 7
LDLLAQ
Sbjct: 145 LDLLAQ 150


>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2

Query: 2 LDLLAQ 7
LDLLAQ
Sbjct: 144 LDLLAQ 149


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1 HLDLLA 6
H+DLLA
Sbjct: 261 HVDLLA 266


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 HLDLLA 6
H+DLLA
Sbjct: 261 HVDLLA 266


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 HLDLLA 6
H+DLLA
Sbjct: 261 HVDLLA 266




23|SequenceR|120|111|ASGLAHLDLL

>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 ASGLAHLDL 9
ASG HLD+
Sbjct: 279 ASGSVHLDI 287


>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain

Query: 3 GLAHLDLL 10
GL H DLL
Sbjct: 505 GLEHQDLL 512


>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 ASGLAHLDL 9
ASG HLD+
Sbjct: 279 ASGSVHLDI 287


>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 ASGLAHLDL 9
ASG HLD+
Sbjct: 279 ASGSVHLDI 287


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 ASGLAHLD 8
++GL H+D
Sbjct: 1562 STGLTHID 1569


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 ASGLAHLDLL 10
+SGL+H LL
Sbjct: 741 SSGLSHEGLL 750


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 ASGLAHLDLL 10
A+GL + D+L
Sbjct: 2736 AAGLKNFDML 2745


Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1567 TGLTHID 1573


>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus

Query: 2 SGLAHLDLL 10
SG+ H+D L
Sbjct: 434 SGVTHIDSL 442


>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 SGLAHLDLL 10
SG+ H+D L
Sbjct: 434 SGVTHIDSL 442


>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 SGLAHLDLL 10
SG+ H+D L
Sbjct: 434 SGVTHIDPL 442


>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)

Query: 2 SGLAHLDLL 10
SG+ H+D L
Sbjct: 434 SGVTHIDPL 442


>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 3 GLAHLDL 9
GL HLD+
Sbjct: 252 GLTHLDV 258


>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 GLAHLDL 9
GL HLD+
Sbjct: 252 GLTHLDV 258


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1564 TGLTHID 1570


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1565 TGLTHID 1571


Query: 1 ASGLAHLDLL 10
A+GL + D+L
Sbjct: 2730 AAGLTNYDML 2739


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1567 TGLTHID 1573


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1563 TGLTHID 1569


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1571 TGLTHID 1577


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1568 TGLTHID 1574


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1569 TGLTHID 1575


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1569 TGLTHID 1575


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1563 TGLTHID 1569


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1567 TGLTHID 1573


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1567 TGLTHID 1573


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1563 TGLTHID 1569


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1567 TGLTHID 1573


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1567 TGLTHID 1573


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1563 TGLTHID 1569


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1563 TGLTHID 1569


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1563 TGLTHID 1569


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1567 TGLTHID 1573


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1563 TGLTHID 1569


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1563 TGLTHID 1569


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1563 TGLTHID 1569


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1567 TGLTHID 1573


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1563 TGLTHID 1569


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1568 TGLTHID 1574


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1563 TGLTHID 1569


>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)

Query: 3 GLAHLDL 9
G++HLD+
Sbjct: 272 GISHLDI 278


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1568 TGLTHID 1574


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 SGLAHLD 8
+GL H+D
Sbjct: 1563 TGLTHID 1569


>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)

Query: 3 GLAHLDL 9
G++HLD+
Sbjct: 272 GISHLDI 278




24|SequenceR|125|116|HPDTRASGLA

>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 2 PDTRASGLA 10
PDTR+SG A
Sbjct: 606 PDTRSSGPA 614


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 2 PDTRASGLA 10
PDT+ASG A
Sbjct: 604 PDTKASGPA 612


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 2 PDTRASGLA 10
PDT+ASG A
Sbjct: 604 PDTKASGPA 612


>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)

Query: 1 HPDTRASGLA 10
+PD R GLA
Sbjct: 93 YPDGRGHGLA 102


>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)

Query: 1 HPDTRASGLA 10
+PD R GLA
Sbjct: 95 YPDGRGCGLA 104


>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 HPDTRASGLA 10
+PD R GLA
Sbjct: 95 YPDGRGCGLA 104


>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 HPDTRA 6
HPDTRA
Sbjct: 113 HPDTRA 118


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 2 PDTRASGLA 10
PDT++SG A
Sbjct: 606 PDTQSSGPA 614


>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)

Query: 3 DTRASGLA 10
DTR GLA
Sbjct: 657 DTRPEGLA 664


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 2 PDTRASGLA 10
P+T ASG A
Sbjct: 607 PNTEASGPA 615


>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38

Query: 1 HPDTRAS 7
HP TRA+
Sbjct: 170 HPPTRAT 176


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 2 PDTRASG 8
P+T ASG
Sbjct: 607 PNTEASG 613


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 2 PDTRASGL 9
P T ASGL
Sbjct: 63 PTTPASGL 70




25|SequenceR|130|121|LFDCLHPDTR

>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate

Query: 1 LFDCLHPDTR 10
L +C+HPD +
Sbjct: 126 LSNCVHPDIK 135


>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 LFDCLHP 7
LFDC+ P
Sbjct: 440 LFDCIEP 446


>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P

Query: 1 LFDCLHPDT 9
FDC PD+
Sbjct: 332 FFDCFRPDS 340


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 FDCLHPDTR 10
++ L PDTR
Sbjct: 2945 YESLRPDTR 2953


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 FDCLHPDTR 10
++ L PDTR
Sbjct: 2945 YESLRPDTR 2953


>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)

Query: 2 FDCLHP 7
F CLHP
Sbjct: 142 FPCLHP 147


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 3 DCLHPD 8
D LHPD
Sbjct: 492 DALHPD 497


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 3 DCLHPD 8
D LHPD
Sbjct: 492 DALHPD 497


>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 FDCLHPD 8
++CL PD
Sbjct: 992 YECLRPD 998


>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 FDCLHPD 8
++CL PD
Sbjct: 992 YECLRPD 998


>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 FDCLHPD 8
++CL PD
Sbjct: 992 YECLRPD 998


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2 FDCLHP 7
+DC HP
Sbjct: 2816 YDCEHP 2821


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 2 FDCLHP 7
+DC HP
Sbjct: 2803 YDCEHP 2808


>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)

Query: 1 LFDCLHPDTR 10
+ +C HP R
Sbjct: 208 ILECAHPSPR 217


>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)

Query: 2 FDCLHPD 8
F CLH D
Sbjct: 314 FRCLHED 320


>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 6 HPDTR 10
HPDTR
Sbjct: 113 HPDTR 117


>sp|DNLI_VARV|DNA ligase|Variola virus

Query: 1 LFDCLHPD 8
+FDCL+ D
Sbjct: 316 VFDCLYFD 323


>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 LFDCLHPD 8
+FDCL+ D
Sbjct: 316 VFDCLYFD 323


>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 LHPDTR 10
+HPDTR
Sbjct: 353 VHPDTR 358


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1 LFDCLHPD 8
LF C +PD
Sbjct: 2150 LFGCENPD 2157


>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)

Query: 1 LFDCLHPD 8
+FDCL+ D
Sbjct: 316 VFDCLYFD 323


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1 LFDCLHPD 8
L DC PD
Sbjct: 701 LKDCFKPD 708


>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LFDCLHPD 8
+FDCL+ D
Sbjct: 316 VFDCLYFD 323


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 LFDCLHPD 8
LF C +PD
Sbjct: 2150 LFGCENPD 2157


>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)

Query: 1 LFDCLHPD 8
+FD HPD
Sbjct: 205 VFDSSHPD 212


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1 LFDCLHP 7
LF+ LHP
Sbjct: 692 LFNWLHP 698


>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)

Query: 1 LFDCLHPD 8
+FDCL+ D
Sbjct: 318 VFDCLYFD 325


>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)

Query: 1 LFDCLHPDTR 10
LFDCL+ ++
Sbjct: 203 LFDCLNETSK 212


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 CLHPDT 9
C HP+T
Sbjct: 1545 CRHPNT 1550


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 4 CLHPD 8
C HPD
Sbjct: 2221 CAHPD 2225


>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5 LHPDT 9
LHPDT
Sbjct: 760 LHPDT 764


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 5 LHPDTR 10
L PDTR
Sbjct: 2925 LRPDTR 2930


>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11])

Query: 1 LFDCLHP 7
+F+CL P
Sbjct: 391 IFNCLEP 397


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 5 LHPDTR 10
L PDTR
Sbjct: 2925 LRPDTR 2930


>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1 LFDCLHP 7
+F+CL P
Sbjct: 391 IFNCLEP 397


>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 1 LFDCLHP 7
+F+CL P
Sbjct: 391 IFNCLEP 397


>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])

Query: 1 LFDCLHP 7
+F+CL P
Sbjct: 391 IFNCLEP 397


>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain

Query: 3 DCLHPD 8
+CL PD
Sbjct: 308 ECLDPD 313


>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 1 LFDCLHP 7
+F+CL P
Sbjct: 391 IFNCLEP 397


>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1 LFDCLHP 7
+F+CL P
Sbjct: 391 IFNCLEP 397


>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1 LFDCLHP 7
+F+CL P
Sbjct: 391 VFNCLEP 397


>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1 LFDCLHP 7
+F+CL P
Sbjct: 391 IFNCLEP 397


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 5 LHPDT 9
LHPD+
Sbjct: 1526 LHPDS 1530


>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United

Query: 1 LFDCLHP 7
+F+CL P
Sbjct: 391 IFNCLEP 397


>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 1 LFDCLHP 7
+F+CL P
Sbjct: 391 IFNCLEP 397


>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)

Query: 3 DCLH 6
DCLH
Sbjct: 309 DCLH 312


>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)

Query: 3 DCLH 6
DCLH
Sbjct: 309 DCLH 312


>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)

Query: 3 DCLH 6
DCLH
Sbjct: 302 DCLH 305


>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)

Query: 3 DCLH 6
DCLH
Sbjct: 300 DCLH 303


>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)

Query: 3 DCLH 6
DCLH
Sbjct: 304 DCLH 307


>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)

Query: 3 DCLH 6
DCLH
Sbjct: 309 DCLH 312


>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)

Query: 3 DCLH 6
DCLH
Sbjct: 294 DCLH 297


>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)

Query: 3 DCLH 6
DCLH
Sbjct: 302 DCLH 305


>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)

Query: 3 DCLH 6
DCLH
Sbjct: 298 DCLH 301


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 3 DCLH 6
DCLH
Sbjct: 308 DCLH 311


>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)

Query: 3 DCLH 6
DCLH
Sbjct: 309 DCLH 312


>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)

Query: 3 DCLH 6
DCLH
Sbjct: 305 DCLH 308


>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong

Query: 3 DCLH 6
DCLH
Sbjct: 299 DCLH 302


>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)

Query: 3 DCLH 6
DCLH
Sbjct: 302 DCLH 305


>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)

Query: 3 DCLH 6
DCLH
Sbjct: 292 DCLH 295


>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)

Query: 3 DCLH 6
DCLH
Sbjct: 294 DCLH 297


>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)

Query: 3 DCLH 6
DCLH
Sbjct: 294 DCLH 297


>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)

Query: 3 DCLH 6
DCLH
Sbjct: 294 DCLH 297


>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)

Query: 3 DCLH 6
DCLH
Sbjct: 294 DCLH 297


>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)

Query: 3 DCLH 6
DCLH
Sbjct: 294 DCLH 297


>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)

Query: 3 DCLH 6
DCLH
Sbjct: 294 DCLH 297


>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)

Query: 3 DCLH 6
DCLH
Sbjct: 294 DCLH 297


>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)

Query: 3 DCLH 6
DCLH
Sbjct: 294 DCLH 297


>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)

Query: 3 DCLH 6
DCLH
Sbjct: 294 DCLH 297


>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 3 DCLH 6
DCLH
Sbjct: 299 DCLH 302


>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)

Query: 3 DCLH 6
DCLH
Sbjct: 307 DCLH 310


>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)

Query: 3 DCLH 6
DCLH
Sbjct: 309 DCLH 312


>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann

Query: 3 DCLH 6
DCLH
Sbjct: 301 DCLH 304


>sp|NSP4_ROTHC|NON-STRUCTURAL glycoprotein 4|Rotavirus C (isolate RVC/Human/United

Query: 1 LFDCLHPD 8
LF+ LH D
Sbjct: 95 LFNSLHDD 102


>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)

Query: 3 DCLH 6
DCLH
Sbjct: 292 DCLH 295


>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)

Query: 3 DCLH 6
DCLH
Sbjct: 294 DCLH 297


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 1 LFDCLHP 7
L +C+HP
Sbjct: 126 LSNCVHP 132


>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 LHPDTR 10
+HP+TR
Sbjct: 353 VHPETR 358


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 2 FDCLHPDT 9
FDCL D+
Sbjct: 264 FDCLTTDS 271


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 1 LFDCLHPDTR 10
L+D H D R
Sbjct: 1317 LYDAGHTDVR 1326


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 2 FDCLHPDT 9
FDCL D+
Sbjct: 264 FDCLTTDS 271


>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180

Query: 1 LFDCLHPDT 9
L+D PDT
Sbjct: 349 LYDIYAPDT 357


>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2

Query: 3 DCLH 6
DCLH
Sbjct: 29 DCLH 32




26|SequenceR|135|126|LFHTELFDCL

>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L HT FDC
Sbjct: 106 LIHTYYFDCF 115


>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 HTELFDCL 10
HT L DCL
Sbjct: 255 HTALHDCL 262


>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 HTELFDCL 10
HT L DCL
Sbjct: 254 HTALHDCL 261


>sp|YVAO_VACCC|UNCHARACTERIZED 9.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LFHTELFDCL 10
L TEL+DC+
Sbjct: 16 LIGTELYDCI 25


>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHMHYFDCF 115


>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHMHYFDCF 115


>sp|VIF_HV192|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHMHYFDCF 115


>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHMHYFDCF 115


>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3 HTELFDCL 10
HT L DC+
Sbjct: 255 HTALHDCM 262


>sp|VIF_HV1YF|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLHYFDCF 115


>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLHYFDCF 115


>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLHYFDCF 115


>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLHYFDCF 115


>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLHYFDCF 115


>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 107 LIHLRYFDCF 116


>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLHYFDCF 115


>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 107 LIHLHYFDCF 116


>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLHYFDCF 115


>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLHYFDCF 115


>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)

Query: 1 LFHTELFDCL 10
L+H +L +CL
Sbjct: 276 LYHPQLPECL 285


>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)

Query: 1 LFHTELFDCL 10
L+H +L +CL
Sbjct: 283 LYHPQLPECL 292


>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)

Query: 1 LFHTELFDCL 10
L+H +L +CL
Sbjct: 281 LYHPQLPECL 290


>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)

Query: 1 LFHTELFDCL 10
+ +LFDCL
Sbjct: 247 MMRPDLFDCL 256


>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)

Query: 1 LFHTELFDCL 10
+ +LFDCL
Sbjct: 247 MMRPDLFDCL 256


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 1 LFHTELFDC 9
LF+TE F C
Sbjct: 808 LFYTEPFIC 816


>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHMYYFDCF 115


>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHMYYFDCF 115


>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHMYYFDCF 115


>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHMYYFDCF 115


>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHIYYFDCF 115


>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHIYYFDCF 115


>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHIYYFDCF 115


>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHIYYFDCF 115


>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLYYFDCF 115


>sp|VIF_HV1SC|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 23 LIHLYYFDCF 32


>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLYYFDCF 115


>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLYYFDCF 115


>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLYYFDCF 115


>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLYYFDCF 115


>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLYYFDCF 115


>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLYYFDCF 115


>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLYYFDCF 115


>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLYYFDCF 115


>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLYYFDCF 115


>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLYYFDCF 115


>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHLYYFDCF 115


>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United

Query: 4 TELFDCL 10
TE+F+CL
Sbjct: 389 TEIFNCL 395


>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 4 TELFDCL 10
TE+F+CL
Sbjct: 389 TEIFNCL 395


>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 4 TELFDCL 10
TE+F+CL
Sbjct: 389 TEIFNCL 395


>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 4 TELFDCL 10
TE+F+CL
Sbjct: 389 TEIFNCL 395


>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)

Query: 3 HTELFDC 9
HT F+C
Sbjct: 318 HTNFFEC 324


>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)

Query: 3 HTELFDC 9
HT F+C
Sbjct: 318 HTNFFEC 324


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 2 FHTELFDCL 10
FHT +C+
Sbjct: 1285 FHTRCINCV 1293


>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62

Query: 1 LFHTELFD 8
L HTE FD
Sbjct: 364 LRHTEEFD 371


>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61

Query: 1 LFHTELFD 8
L HTE FD
Sbjct: 365 LRHTEEFD 372


>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human

Query: 1 LFHTELFD 8
L HTE FD
Sbjct: 370 LRHTEEFD 377


>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)

Query: 3 HTELFDC 9
HT F+C
Sbjct: 321 HTNFFEC 327


>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)

Query: 3 HTELFDC 9
HT F+C
Sbjct: 321 HTNFFEC 327


>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 LFHTELFDCL 10
L H FDC
Sbjct: 106 LIHMCYFDCF 115


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 3 HTELFDC 9
H E+ DC
Sbjct: 2097 HPEILDC 2103


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 FHTELFD 8
FHT FD
Sbjct: 6351 FHTPAFD 6357


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 FHTELFD 8
FHT FD
Sbjct: 6328 FHTPAFD 6334


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 1 LFHTELFDC 9
L HT+ F C
Sbjct: 362 LVHTDSFSC 370


>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 FHTELFDCL 10
F+T L CL
Sbjct: 43 FYTGLLHCL 51


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 4 TELFDC 9
TEL DC
Sbjct: 785 TELSDC 790


>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)

Query: 3 HTELFDCL 10
HT F CL
Sbjct: 660 HTAAFVCL 667


>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)

Query: 3 HTELFDCL 10
HT F CL
Sbjct: 658 HTAAFVCL 665




27|SequenceR|140|131|KVEEDLFHTE

>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1 KVEEDLFHTE 10
+V EDL H E
Sbjct: 487 EVTEDLLHLE 496


>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1 KVEEDLFHTE 10
+V EDL H E
Sbjct: 488 EVTEDLLHLE 497


>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1 KVEEDLFHTE 10
+V EDL H E
Sbjct: 488 EVTEDLLHLE 497


>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1 KVEEDLFHTE 10
+V EDL H E
Sbjct: 489 EVTEDLLHLE 498


>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1 KVEEDLFHTE 10
+V EDL H E
Sbjct: 488 EVTEDLLHLE 497


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1 KVEEDLFHTE 10
+V EDL H E
Sbjct: 488 EVTEDLLHLE 497


>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1 KVEEDLFHTE 10
+V EDL H E
Sbjct: 488 EVTEDLLHLE 497


>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 VEEDLFHTE 10
V ED FH +
Sbjct: 30 VHEDHFHVQ 38


>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 VEEDLFHTE 10
V ED FH +
Sbjct: 30 VHEDHFHVQ 38


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 5 DLFHTE 10
DLF+TE
Sbjct: 807 DLFYTE 812


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 DLFHTE 10
DLF+TE
Sbjct: 807 DLFYTE 812


>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus

Query: 2 VEEDLFHT 9
V+ED HT
Sbjct: 29 VDEDHIHT 36


>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 VEEDLFHT 9
V+ED HT
Sbjct: 29 VDEDHIHT 36


>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 VEEDLFHT 9
V+ED HT
Sbjct: 29 VDEDHIHT 36


>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)

Query: 2 VEEDLFHT 9
V+ED HT
Sbjct: 29 VDEDHIHT 36


>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain

Query: 1 KVEEDL 6
KVEED+
Sbjct: 89 KVEEDM 94




28|SequenceR|145|136|MKKILKVEED

>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 MKKILKV 7
MKKILK+
Sbjct: 397 MKKILKM 403


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 MKKILKVEED 10
+ K+ KV ED
Sbjct: 187 LNKVWKVSED 196


>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig

Query: 3 KILKVEE 9
KILK+E+
Sbjct: 254 KILKIEK 260




29|SequenceR|150|141|TLHDGMKKIL

>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 2 LHDGMK 7
LHDG++
Sbjct: 992 LHDGLR 997


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 3 HDGMKKI 9
H G+KKI
Sbjct: 255 HKGLKKI 261


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 4 DGMKKIL 10
+GMKK++
Sbjct: 446 NGMKKVI 452


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 4 DGMKKIL 10
+GMKK++
Sbjct: 446 NGMKKVI 452


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 4 DGMKKIL 10
+GMKK++
Sbjct: 446 NGMKKVI 452




30|SequenceR|155|146|LRHLNTLHDG

>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn

Query: 1 LRHLNTLH 8
L H+NTLH
Sbjct: 228 LDHVNTLH 235


>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 RHLNTLHDG 10
+HL T++DG
Sbjct: 239 KHLPTMYDG 247


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 4 LNTLHD 9
+NTLHD
Sbjct: 1180 INTLHD 1185


>sp|ORF24_TTVV6|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT23F/2001)

Query: 1 LRHLNTLH 8
+ HLN++H
Sbjct: 35 IEHLNSIH 42


>sp|ORF23_TTVV6|PROBABLE protein VP2|Torque teno virus (isolate Human/China/CT23F/2001)

Query: 1 LRHLNTLH 8
+ HLN++H
Sbjct: 35 IEHLNSIH 42


>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)

Query: 2 RHLNTLHD 9
RHL LHD
Sbjct: 292 RHLPILHD 299


>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 RHLNTLHD 9
RHL LHD
Sbjct: 292 RHLPILHD 299


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 LRHLNTLHDG 10
+++LN LH G
Sbjct: 4215 VKNLNNLHRG 4224


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 LRHLNTLHDG 10
+++LN LH G
Sbjct: 4215 VKNLNNLHRG 4224


>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39

Query: 1 LRHLNT 6
LRHLN+
Sbjct: 118 LRHLNS 123


>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 RHLNTLHDG 10
R+L+TL+ G
Sbjct: 467 RYLDTLYSG 475


>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 RHLNTLHDG 10
R+L+TL+ G
Sbjct: 467 RYLDTLYSG 475


>sp|VE6_HPV70|PROTEIN E6|Human papillomavirus type 70

Query: 1 LRHLNT 6
LRH+NT
Sbjct: 118 LRHVNT 123


>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)

Query: 3 HLNTLH 8
H+NTLH
Sbjct: 241 HVNTLH 246


>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)

Query: 3 HLNTLHDG 10
HL T++DG
Sbjct: 240 HLPTMYDG 247


>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka

Query: 2 RHLNTLHD 9
R NT+HD
Sbjct: 5 RIFNTVHD 12


>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)

Query: 2 RHLNTLHD 9
R NT+HD
Sbjct: 5 RIFNTVHD 12


>sp|VE6_HPVME|PROTEIN E6|Human papillomavirus type ME180

Query: 1 LRHLNT 6
LRHLN+
Sbjct: 118 LRHLNS 123


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 2 RHLNTLHDG 10
RHL +H G
Sbjct: 1292 RHLVAVHHG 1300


>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 HLNTLHDG 10
HL T++DG
Sbjct: 240 HLPTMYDG 247


>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United

Query: 1 LRHLNTLHDG 10
L H NTL G
Sbjct: 476 LHHCNTLQFG 485


>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 HLNTLHDG 10
H++ HDG
Sbjct: 139 HMSGTHDG 146


>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 HLNTLHDG 10
H++ HDG
Sbjct: 139 HMSGTHDG 146


>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 HLNTLHDG 10
H++ HDG
Sbjct: 139 HMSGTHDG 146


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 LRHLNTLHDG 10
+ +LN L DG
Sbjct: 6589 IENLNVLFDG 6598


>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate

Query: 3 HLNTLH 8
H+NTLH
Sbjct: 229 HVNTLH 234


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 4 LNTLHDG 10
+NT+ DG
Sbjct: 1499 MNTIEDG 1505


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 LRHLNTLHDG 10
+ +LN L DG
Sbjct: 6569 IENLNILFDG 6578


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 LRHLNTLHDG 10
+ +LN L DG
Sbjct: 6619 IENLNILFDG 6628




31|SequenceR|160|151|AEPGGLRHLN

>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 4 GGLRHL 9
GGLRH+
Sbjct: 464 GGLRHI 469


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 4 GGLRHL 9
GGLRH+
Sbjct: 464 GGLRHI 469


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 2 EPGGLRHLN 10
EP G RH++
Sbjct: 260 EPSGSRHID 268


>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 1 AEPGGLRHLN 10
+ PGG+R N
Sbjct: 387 STPGGMRTRN 396


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 2 EPGGLRHLN 10
EP GL+ N
Sbjct: 1315 EPQGLKDFN 1323


>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 EPGGLR 7
EP GLR
Sbjct: 97 EPSGLR 102


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 2 EPGGLRH 8
EP G RH
Sbjct: 257 EPSGSRH 263


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 2 EPGGLRH 8
EP G RH
Sbjct: 257 EPSGSRH 263


>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P

Query: 1 AEPGGL 6
A PGGL
Sbjct: 62 ASPGGL 67


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 2 EPGGLRH 8
EP G RH
Sbjct: 257 EPSGSRH 263


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 2 EPGGLRH 8
EP G RH
Sbjct: 257 EPSGSRH 263


>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 EPGGLRHL 9
+PG RHL
Sbjct: 158 QPGSHRHL 165


>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 EPGGLRHL 9
+PG RHL
Sbjct: 158 QPGSHRHL 165


>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 GLRHLN 10
GLRH N
Sbjct: 346 GLRHKN 351




32|SequenceR|165|156|YEGLGAEPGG

>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1 YEGLGAEPGG 10
+ LGA+P G
Sbjct: 972 FHNLGAQPSG 981


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1 YEGLGAEPGG 10
+ LGA+P G
Sbjct: 972 FHNLGAQPSG 981


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4 LGAEPG 9
+GAEPG
Sbjct: 660 IGAEPG 665


>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)

Query: 4 LGAEPG 9
LGA+PG
Sbjct: 458 LGAKPG 463


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 1 YEGLGAEPGG 10
+ LG++P G
Sbjct: 991 FHNLGSQPSG 1000


>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 GLGAEP 8
G+G+EP
Sbjct: 125 GIGSEP 130


>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain

Query: 1 YEGLGAEPGG 10
YE +G P G
Sbjct: 379 YEDVGIGPNG 388


>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 LGAEPGG 10
+GA PGG
Sbjct: 134 VGARPGG 140




33|SequenceR|175|161|DHKLTLREFLYEGLG

>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)

Query: 5 TLREFLYEGL 14
TLR+++YEGL
Sbjct: 51 TLRQYVYEGL 60


>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 6 LREFLYEGL 14
+R FLYEG+
Sbjct: 206 MRRFLYEGV 214


>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 2 HKLTLREFLYEGL 14
HKLTL E +GL
Sbjct: 347 HKLTLSEVTGQGL 359


>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 2 HKLTLREFLYEGL 14
HKLTL E +GL
Sbjct: 347 HKLTLSEVTGQGL 359


>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 2 HKLTLREFLYEGL 14
HKLTL E +GL
Sbjct: 347 HKLTLSEVTGQGL 359


>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 3 KLTLREFLYEGL 14
+LT+ EF YE L
Sbjct: 301 QLTINEFKYEML 312


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 3 KLTLREFLYEGL 14
+LT+ EF YE L
Sbjct: 301 QLTINEFKYEML 312


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 3 KLTLREFLYEGL 14
+LT+ EF YE L
Sbjct: 301 QLTINEFKYEML 312


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 KLTLREFLYEGL 14
+LT+ EF YE L
Sbjct: 301 QLTINEFKYEML 312


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 3 KLTLREFLYEGL 14
+LT+ EF YE L
Sbjct: 293 QLTINEFKYEML 304


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 3 KLTLREFLYEGL 14
+LT+ EF YE L
Sbjct: 301 QLTINEFKYEML 312


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 3 KLTLREFLYEGL 14
+LT+ EF YE L
Sbjct: 301 QLTINEFKYEML 312


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 3 KLTLREFLYEGL 14
+LT+ EF YE L
Sbjct: 301 QLTINEFKYEML 312


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 3 KLTLREFLYEGL 14
+LT+ EF YE L
Sbjct: 301 QLTINEFKYEML 312


>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 6 LREFLYEGLG 15
L+EF Y+ +G
Sbjct: 278 LKEFYYQAIG 287


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3 KLTLREFLY 11
KLTL FLY
Sbjct: 1485 KLTLDNFLY 1493


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3 KLTLREFLY 11
KLTL FLY
Sbjct: 1485 KLTLDNFLY 1493


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 6 LREFLYEGL 14
EF YEGL
Sbjct: 698 FHEFAYEGL 706


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 6 LREFLYEGL 14
EF YEGL
Sbjct: 695 FHEFAYEGL 703


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 6 LREFLYEGL 14
EF YEGL
Sbjct: 694 FHEFAYEGL 702


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 6 LREFLYEGL 14
EF YEGL
Sbjct: 697 FHEFAYEGL 705


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 6 LREFLYEGL 14
EF YEGL
Sbjct: 695 FHEFAYEGL 703


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 6 LREFLYEGL 14
EF YEGL
Sbjct: 694 FHEFAYEGL 702


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 8 EFLYEGL 14
EF YEGL
Sbjct: 698 EFAYEGL 704


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 8 EFLYEGL 14
EF YEGL
Sbjct: 698 EFAYEGL 704


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 8 EFLYEGL 14
EF YEGL
Sbjct: 698 EFAYEGL 704


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 8 EFLYEGL 14
EF YEGL
Sbjct: 698 EFAYEGL 704


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 8 EFLYEGL 14
EF YEGL
Sbjct: 698 EFAYEGL 704


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2 HKLTLREFLYEGL 14
H L L+ YEGL
Sbjct: 632 HALRLKGTAYEGL 644


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 7 REFLYEGL 14
RE+L++GL
Sbjct: 433 REYLWDGL 440


>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P

Query: 7 REFLYEGLG 15
REF YE +
Sbjct: 114 REFFYEAIA 122


>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain

Query: 6 LREFLYEGL 14
+REF Y+G
Sbjct: 25 VREFAYQGF 33


>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)

Query: 6 LREFLYEGL 14
+REF Y+G
Sbjct: 25 VREFAYQGF 33


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 KLTLREFLYEGLG 15
KLT RE L G+G
Sbjct: 1220 KLTSRENLLLGVG 1232


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 KLTLREFLYEGLG 15
KLT RE L G+G
Sbjct: 1220 KLTSRENLLLGVG 1232


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 KLTLREFLYEGLG 15
KLT RE L G+G
Sbjct: 1220 KLTSRENLLLGVG 1232


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 KLTLREFLYEGLG 15
KLT RE L G+G
Sbjct: 1220 KLTSRENLLLGVG 1232


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 KLTLREFLYEGLG 15
KLT RE L G+G
Sbjct: 1220 KLTSRENLLLGVG 1232


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DHKLTLREFLYEGL 14
DH LR++ + GL
Sbjct: 951 DHLTPLRDWAHAGL 964


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DHKLTLREFLYEGL 14
DH LR++ + GL
Sbjct: 951 DHLTPLRDWAHAGL 964


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 DHKLTLREFLYEGL 14
DH LR++ + GL
Sbjct: 951 DHLTPLRDWAHAGL 964


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 5 TLREFLYEG 13
T+RE+ YE
Sbjct: 343 TVREYCYEA 351


>sp|NS12_CVHN1|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N1)

Query: 2 HKLTLREF 9
H L +REF
Sbjct: 10 HSLVIREF 17


>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 DHKLTLREFLYEGLG 15
+ KLT R+ + EGL
Sbjct: 511 NSKLTRRQPIREGLA 525


>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 6 LREFLYEGL 14
LR ++Y+GL
Sbjct: 51 LRGYVYQGL 59


>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 6 LREFLYEGL 14
LR ++Y+GL
Sbjct: 51 LRGYVYQGL 59


>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 6 LREFLYEGL 14
LR ++Y+GL
Sbjct: 51 LRGYVYQGL 59


>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 6 LREFLYEGL 14
LR ++Y+GL
Sbjct: 51 LRGYVYQGL 59


>sp|VE7_HPV33|PROTEIN E7|Human papillomavirus 33

Query: 2 HKLTLREFLYE 12
HK TL+E++ +
Sbjct: 4 HKPTLKEYVLD 14


>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 6 LREFLYEGL 14
LR ++Y+GL
Sbjct: 51 LRGYVYQGL 59


>sp|PHOSP_VSIVG|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 1 DHKLTLREFLYEGL 14
+H TLR L EGL
Sbjct: 117 EHGKTLRLTLPEGL 130


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 6 LREFLYEG 13
L+EFL+ G
Sbjct: 154 LKEFLFAG 161


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 6 LREFLYEG 13
L+EFL+ G
Sbjct: 154 LKEFLFAG 161


>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 1 DHKLTLREFLYEGL 14
+H TLR L EGL
Sbjct: 117 EHGKTLRLTLPEGL 130


>sp|PHOSP_VSIVS|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 1 DHKLTLREFLYEGL 14
+H TLR L EGL
Sbjct: 117 EHGKTLRLTLPEGL 130


>sp|PHOSP_VSIVM|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 1 DHKLTLREFLYEGL 14
+H TLR L EGL
Sbjct: 117 EHGKTLRLTLPEGL 130


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 HKLTLREFLYEGL 14
H L L+ YEG+
Sbjct: 631 HALRLKGTAYEGM 643


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 HKLTLREFLYE 12
H LR+ LYE
Sbjct: 850 HDPALRQSLYE 860


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 HKLTLREFLYE 12
H LR+ LYE
Sbjct: 850 HDPALRQSLYE 860


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 HKLTLREFLYE 12
H LR+ LYE
Sbjct: 850 HDPALRQSLYE 860


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 HKLTLREFLYE 12
H LR+ LYE
Sbjct: 850 HDPALRQSLYE 860


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 DHKLTLREFLYEGL 14
DH + LR + +GL
Sbjct: 955 DHLVPLRTWASDGL 968


>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 TLREFLYEGLG 15
TLR FL+E G
Sbjct: 90 TLRCFLHEPSG 100


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 HKLTLREFLYE 12
H LR+ LYE
Sbjct: 850 HDPALRQSLYE 860


>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31

Query: 7 REFLYEGLG 15
R FLY +G
Sbjct: 339 RSFLYSNVG 347


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 7 REFLYEGLG 15
R FLY +G
Sbjct: 437 RSFLYSNVG 445


>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 HKLTLR 7
HK+TLR
Sbjct: 140 HKITLR 145


>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 107 DYLYQGCG 114


>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 101 DYLYQGCG 108


>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 101 DYLYQGCG 108


>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 101 DYLYQGCG 108


>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 101 DYLYQGCG 108


>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 101 DYLYQGCG 108


>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 107 DYLYQGCG 114


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 100 DYLYQGCG 107


>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 101 DYLYQGCG 108


>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 100 DYLYQGCG 107


>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 114 DYLYQGCG 121


>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 100 DYLYQGCG 107


>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 101 DYLYQGCG 108


>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 101 DYLYQGCG 108


>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 113 DYLYQGCG 120


>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann

Query: 8 EFLYEGLG 15
++LY+G G
Sbjct: 114 DYLYQGCG 121


>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4 LTLREFLYEG 13
LT+ +L+EG
Sbjct: 159 LTMAYYLFEG 168


>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 LTLREFLYEG 13
LT+ +L+EG
Sbjct: 159 LTMAYYLFEG 168


>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 LTLREFLYEG 13
LT+ +L+EG
Sbjct: 159 LTMAYYLFEG 168


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 1 DHKLTLREFLYEGL 14
D+ + ++FL EG+
Sbjct: 492 DYAVDNKDFLREGI 505




34|SequenceR|175|166|DHKLTLREFL

>sp|NS12_CVHN1|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N1)

Query: 2 HKLTLREF 9
H L +REF
Sbjct: 10 HSLVIREF 17


>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 2 HKLTLRE 8
HKLTL E
Sbjct: 347 HKLTLSE 353


>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 2 HKLTLRE 8
HKLTL E
Sbjct: 347 HKLTLSE 353


>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 2 HKLTLRE 8
HKLTL E
Sbjct: 347 HKLTLSE 353


>sp|VE7_HPV33|PROTEIN E7|Human papillomavirus 33

Query: 2 HKLTLREFL 10
HK TL+E++
Sbjct: 4 HKPTLKEYV 12


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 HKLTLREFL 10
H+L+L+E +
Sbjct: 4742 HRLSLKELM 4750


>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 1 DHKLTLREF 9
DH LT++ F
Sbjct: 473 DHYLTMQGF 481


>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 HKLTLR 7
HK+TLR
Sbjct: 140 HKITLR 145




THE END