FRIL_HUMAN Blast Output
HumanVirus
1|Sequence|1|10|MSSQIRQNYS

>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 122 SSQVSQNY 129


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 128 SSQVSQNY 135


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 127 SSQVSQNY 134


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 1 MSSQIRQNY 9
++SQ+RQN+
Sbjct: 847 LTSQLRQNF 855


>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 127 SSQVSQNY 134


>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 122 SSQVSQNY 129


>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
+SQ+ QNY
Sbjct: 125 NSQVSQNY 132


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
+SQ+ QNY
Sbjct: 125 NSQVSQNY 132


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
+SQ+ QNY
Sbjct: 126 NSQVSQNY 133


>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 128 SSQVSQNY 135


>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
+SQ+ QNY
Sbjct: 125 NSQVSQNY 132


>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
SSQ+ QNY
Sbjct: 125 SSQVSQNY 132


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 1 MSSQIRQNY 9
++SQ+R N+
Sbjct: 1028 LTSQLRHNF 1036


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
+SQ+ QNY
Sbjct: 125 NSQVSQNY 132


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 SQIRQNY 9
SQ+ QNY
Sbjct: 126 SQVSQNY 132


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1 MSSQIRQN 8
+SSQI+QN
Sbjct: 408 ISSQIQQN 415


>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
+SQ+ QNY
Sbjct: 126 NSQVSQNY 133


>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
+SQ+ QNY
Sbjct: 125 NSQVSQNY 132


>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
+SQ+ QNY
Sbjct: 125 NSQVSQNY 132


>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
+SQ+ QNY
Sbjct: 125 NSQVSQNY 132


>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
+SQ+ QNY
Sbjct: 125 NSQVSQNY 132


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 SSQIRQNY 9
+++IR+NY
Sbjct: 3 ATEIRKNY 10


>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 SQIRQNY 9
SQ+ QNY
Sbjct: 126 SQVSQNY 132


>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)

Query: 4 QIRQNY 9
++RQNY
Sbjct: 211 ELRQNY 216




2|Sequence|6|15|RQNYSTDVEA

>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 1 RQNYSTDV 8
R NY+TD+
Sbjct: 144 RGNYNTDL 151


>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)

Query: 3 NYSTDVE 9
NYS+DV+
Sbjct: 320 NYSSDVQ 326


>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)

Query: 2 QNYSTDVEA 10
Q Y TDV A
Sbjct: 602 QTYLTDVAA 610


>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 NYSTDVE 9
NYS D+E
Sbjct: 85 NYSEDME 91




3|Sequence|11|20|TDVEAAVNSL

>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54

Query: 1 TDVEAAV 7
TDVEAAV
Sbjct: 139 TDVEAAV 145


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 2 DVEAAVN 8
DVE AVN
Sbjct: 570 DVEEAVN 576


>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 1 TDVEAAV 7
TD EAA+
Sbjct: 136 TDAEAAI 142


>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain

Query: 1 TDVEAAV 7
TD EAA+
Sbjct: 136 TDAEAAI 142


>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2 DVEAAVNSL 10
+V+AA+NS+
Sbjct: 74 EVKAAINSV 82


>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 1 TDVEAAVNSL 10
TDVE +NS+
Sbjct: 260 TDVEQQLNSI 269


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1 TDVEAAVN 8
TD ++A+N
Sbjct: 138 TDAQSAIN 145




4|Sequence|16|25|AVNSLVNLYL

>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 2 VNSLVNLY 9
VN+LVN+Y
Sbjct: 767 VNNLVNIY 774


>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)

Query: 3 NSLVNLYL 10
NSL LYL
Sbjct: 463 NSLARLYL 470


>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 NSLVNLYL 10
NSL LYL
Sbjct: 463 NSLARLYL 470


>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus

Query: 4 SLVNLY 9
SL+NLY
Sbjct: 165 SLINLY 170


>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate

Query: 4 SLVNLY 9
SL+NLY
Sbjct: 165 SLINLY 170


>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)

Query: 4 SLVNLY 9
SL+NLY
Sbjct: 165 SLINLY 170


>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 SLVNLY 9
SL+NLY
Sbjct: 165 SLINLY 170


>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)

Query: 4 SLVNLY 9
SL+NLY
Sbjct: 165 SLINLY 170


>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)

Query: 4 SLVNLY 9
SL+NLY
Sbjct: 165 SLINLY 170


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2 VNSLVNLY 9
VNS V+LY
Sbjct: 2568 VNSFVSLY 2575


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 VNSLVNLY 9
VNS V+LY
Sbjct: 2568 VNSFVSLY 2575


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2 VNSLVNLYL 10
VN+LVN+ +
Sbjct: 2297 VNTLVNIMI 2305


>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)

Query: 2 VNSLVNLY 9
VNS NLY
Sbjct: 205 VNSPANLY 212


>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2

Query: 3 NSLVNLYL 10
N+LV LY+
Sbjct: 439 NALVELYV 446


>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain

Query: 1 AVNSLVNLYL 10
+VN ++N+Y+
Sbjct: 721 SVNEMLNMYV 730


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 3 NSLVNLY 9
NS+ N+Y
Sbjct: 116 NSITNIY 122




5|Sequence|21|30|VNLYLQASYT

>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 2 NLYLQAS 8
NLY+QAS
Sbjct: 193 NLYVQAS 199


>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 2 NLYLQAS 8
NLY+QAS
Sbjct: 193 NLYVQAS 199


>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 2 NLYLQAS 8
NLY+QAS
Sbjct: 209 NLYVQAS 215


>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 2 NLYLQAS 8
NLY+QAS
Sbjct: 193 NLYVQAS 199


>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port

Query: 2 NLYLQAS 8
NLY+QAS
Sbjct: 209 NLYVQAS 215


>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975

Query: 2 NLYLQAS 8
NLY+QAS
Sbjct: 210 NLYVQAS 216


>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984

Query: 2 NLYLQAS 8
NLY+QAS
Sbjct: 209 NLYVQAS 215


>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978

Query: 2 NLYLQAS 8
NLY+QAS
Sbjct: 209 NLYVQAS 215


>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978

Query: 2 NLYLQAS 8
NLY+QAS
Sbjct: 209 NLYVQAS 215


>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54

Query: 2 NLYLQASYT 10
+ YL SYT
Sbjct: 442 DFYLHPSYT 450


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 VNLYLQASY 9
V L+L ASY
Sbjct: 1572 VRLFLTASY 1580


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 VNLYLQASY 9
V L+L ASY
Sbjct: 1572 VRLFLTASY 1580


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 VNLYLQASY 9
V L+L ASY
Sbjct: 1572 VRLFLTASY 1580


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 VNLYLQASY 9
V L+L ASY
Sbjct: 1572 VRLFLTASY 1580


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 VNLYLQASY 9
V L+L ASY
Sbjct: 1572 VRLFLTASY 1580




6|Sequence|26|35|QASYTYLSLG

>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 4 YTYLSLG 10
YTYL LG
Sbjct: 793 YTYLGLG 799


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 2 ASYTYLSLG 10
A Y Y+SLG
Sbjct: 1834 AGYPYVSLG 1842


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 3 SYTYLSL 9
SY YLSL
Sbjct: 338 SYKYLSL 344


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1809 AGYPYVTLG 1817


>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41

Query: 1 QASYTYLSLG 10
+A+ TY SLG
Sbjct: 33 RATDTYFSLG 42


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1857 AGYPYVALG 1865


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1850 AGYPYVALG 1858


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1847 AGYPYVALG 1855


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1836 AGYPYVALG 1844


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1838 AGYPYVALG 1846


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1855 AGYPYVALG 1863


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1845 AGYPYVALG 1853


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1838 AGYPYVALG 1846


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1837 AGYPYVTLG 1845


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1839 AGYPYVALG 1847


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1841 AGYPYVALG 1849


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1849 AGYPYVALG 1857


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1839 AGYPYVALG 1847


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1839 AGYPYVALG 1847


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1837 AGYPYVALG 1845


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 2 ASYTYLSLG 10
A Y Y++LG
Sbjct: 1848 AGYPYVALG 1856


>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9

Query: 1 QASYTYLSLG 10
+A+ TY SLG
Sbjct: 33 RATDTYFSLG 42


>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40

Query: 1 QASYTYLSLG 10
+A+ TY SLG
Sbjct: 33 RATDTYFSLG 42




7|Sequence|31|40|YLSLGFYFDR

>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 YLSLGFYFD 9
YLS G +FD
Sbjct: 113 YLSPGLFFD 121


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YLSLGFYFDR 10
Y + FYF+R
Sbjct: 1571 YEMMEFYFNR 1580


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YLSLGFYFDR 10
Y + FYF+R
Sbjct: 1571 YEMMEFYFNR 1580


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YLSLGFYFDR 10
Y + FYF+R
Sbjct: 1571 YEMMEFYFNR 1580


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YLSLGFYFDR 10
Y + FYF+R
Sbjct: 1571 YEMMEFYFNR 1580


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YLSLGFYFDR 10
Y + FYF+R
Sbjct: 1571 YEMMEFYFNR 1580


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YLSLGFYFDR 10
Y + FYF+R
Sbjct: 1571 YEMMEFYFNR 1580


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YLSLGFYFDR 10
Y + FYF+R
Sbjct: 1569 YEMMEFYFNR 1578


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YLSLGFYFDR 10
Y + FYF+R
Sbjct: 1571 YEMMEFYFNR 1580


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YLSLGFYFDR 10
Y + FYF+R
Sbjct: 1571 YEMMEFYFNR 1580


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 YLSLGFYFDR 10
Y + FYF+R
Sbjct: 1405 YEMMEFYFNR 1414


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1 YLSLGFY 7
YL GFY
Sbjct: 797 YLDRGFY 803


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1 YLSLGFY 7
YL GFY
Sbjct: 788 YLDRGFY 794


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1 YLSLGFY 7
YL GFY
Sbjct: 789 YLDRGFY 795


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 1 YLSLGFYFD 9
++S FYFD
Sbjct: 706 FISQPFYFD 714


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 1 YLSLGFYFD 9
++S FYFD
Sbjct: 706 FISQPFYFD 714


>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4 LGFYFD 9
LG YFD
Sbjct: 352 LGSYFD 357




8|Sequence|36|45|FYFDRDDVAL

>sp|UL04_HCMVM|ENVELOPE glycoprotein UL4|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 FYFDRDDV 8
+YF R+DV
Sbjct: 128 YYFKREDV 135


>sp|NS1_HRSVB|NON-STRUCTURAL protein 1|Human respiratory syncytial virus B

Query: 3 FDRDDVAL 10
FD D+VAL
Sbjct: 17 FDNDEVAL 24


>sp|NS1_HRSVA|NON-STRUCTURAL protein 1|Human respiratory syncytial virus A

Query: 3 FDRDDVAL 10
FD D+VAL
Sbjct: 17 FDNDEVAL 24


>sp|NS1_HRSV1|NON-STRUCTURAL protein 1|Human respiratory syncytial virus B

Query: 3 FDRDDVAL 10
FD D+VAL
Sbjct: 17 FDNDEVAL 24


>sp|NS1_HRSV|NON-STRUCTURAL protein 1|Human respiratory syncytial virus

Query: 3 FDRDDVAL 10
FD D+VAL
Sbjct: 17 FDNDEVAL 24


>sp|NS1_HRSS2|NON-STRUCTURAL protein 1|Human respiratory syncytial virus A

Query: 3 FDRDDVAL 10
FD D+VAL
Sbjct: 17 FDNDEVAL 24


>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47

Query: 1 FYFDRDDV 8
+Y D DDV
Sbjct: 138 YYMDSDDV 145


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 3 FDRDDVAL 10
F+RDD+++
Sbjct: 1985 FERDDISM 1992


>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)

Query: 2 YFDRDDV 8
++DRDDV
Sbjct: 275 FYDRDDV 281


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1 FYFDRDDVAL 10
FY D D V L
Sbjct: 1869 FYLDTDGVPL 1878


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1 FYFDRDDVAL 10
FY D D V L
Sbjct: 1869 FYLDTDGVPL 1878


>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 YFDRDDV 8
++DRDDV
Sbjct: 305 FYDRDDV 311


>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 YFDRDDV 8
++DRDD+
Sbjct: 279 FYDRDDI 285


>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 FYFDRD 6
F+F+RD
Sbjct: 6 FFFERD 11


>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 FYFDRD 6
F+F+RD
Sbjct: 6 FFFERD 11


>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 FYFDRD 6
F+F+RD
Sbjct: 6 FFFERD 11


>sp|UL04_HCMVA|EARLY glycoprotein GP48|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 FYFDRDD 7
+YF R+D
Sbjct: 131 YYFKRED 137


>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 YFDRDDV 8
Y+D+D++
Sbjct: 1348 YYDKDEI 1354


>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)

Query: 2 YFDRDDV 8
Y+D+D++
Sbjct: 1362 YYDKDEI 1368


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 2 YFDRDDV 8
Y DR DV
Sbjct: 922 YVDRSDV 928


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 2 YFDRDDV 8
Y DR DV
Sbjct: 922 YVDRSDV 928


>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)

Query: 2 YFDRDDV 8
Y DR DV
Sbjct: 923 YVDRSDV 929


>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)

Query: 2 YFDRDDV 8
Y DR DV
Sbjct: 923 YVDRSDV 929


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 2 YFDRDDV 8
Y DR DV
Sbjct: 922 YVDRSDV 928


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 1 FYFDRDD 7
F FD DD
Sbjct: 289 FVFDTDD 295


>sp|UL04_HCMVT|EARLY glycoprotein GP48|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 FYFDRDD 7
+YF R+D
Sbjct: 127 YYFRRED 133


>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5

Query: 4 DRDDVAL 10
+R+DVAL
Sbjct: 110 EREDVAL 116


>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2

Query: 4 DRDDVAL 10
+R+DVAL
Sbjct: 110 EREDVAL 116


>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19

Query: 1 FYFDRDD 7
+Y D DD
Sbjct: 138 YYVDEDD 144


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 2 YFDRD 6
YFD+D
Sbjct: 653 YFDKD 657


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2 YFDRDDVAL 10
+FDR+D L
Sbjct: 4502 HFDRNDCML 4510


>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38

Query: 3 FDRDDVAL 10
F+R DV+L
Sbjct: 215 FNRSDVSL 222


>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b

Query: 1 FYFDRDD 7
+Y D DD
Sbjct: 138 YYMDADD 144


>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5

Query: 1 FYFDRDD 7
+Y D DD
Sbjct: 138 YYMDADD 144


>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22

Query: 3 FDRDDVAL 10
F+R DV+L
Sbjct: 215 FNRSDVSL 222


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2 YFDRDDVAL 10
+FDR+D ++
Sbjct: 4540 HFDRNDCSI 4548


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2 YFDRDDVAL 10
+FDR+D ++
Sbjct: 4590 HFDRNDCSI 4598




9|Sequence|41|50|DDVALEGVSH

>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 DDVALEGVS 9
DD LEG++
Sbjct: 517 DDTVLEGIN 525


>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 DDVALEGVS 9
DD +EG S
Sbjct: 506 DDTTVEGTS 514


>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 DDVALEGVS 9
DD +EG S
Sbjct: 506 DDTTVEGTS 514


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 1 DDVALEGV 8
+DV +EGV
Sbjct: 748 EDVMIEGV 755




10|Sequence|46|55|EGVSHFFREL

>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 5 HFFRE 9
HFFRE
Sbjct: 412 HFFRE 416


>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)

Query: 5 HFFRE 9
HFFRE
Sbjct: 413 HFFRE 417


>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40

Query: 2 GVSHFFREL 10
G HFFR++
Sbjct: 318 GRVHFFRDI 326


>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)

Query: 3 VSHFFRE 9
+S+FFRE
Sbjct: 550 LSYFFRE 556


>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)

Query: 3 VSHFFRE 9
+S+FFRE
Sbjct: 553 MSYFFRE 559


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 EGVSHFFREL 10
E + H +R+L
Sbjct: 1261 ESIDHLYRDL 1270


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1 EGVSHFFREL 10
E + H +R+L
Sbjct: 1234 ESIDHLYRDL 1243


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1 EGVSHFFREL 10
E + H +R+L
Sbjct: 1239 ESIDHLYRDL 1248


>sp|VPX_HV2KR|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 EGVSHFFREL 10
E V+H REL
Sbjct: 35 EAVNHLPREL 44


>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)

Query: 2 GVSHFFR 8
G+S FFR
Sbjct: 280 GLSRFFR 286


>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b

Query: 5 HFFREL 10
HF+R+L
Sbjct: 364 HFYRDL 369


>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47

Query: 5 HFFREL 10
HF+R+L
Sbjct: 364 HFYRDL 369


>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38

Query: 5 HFFREL 10
HF+R+L
Sbjct: 365 HFYRDL 370


>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37

Query: 5 HFFREL 10
HF+R+L
Sbjct: 370 HFYRDL 375


>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36

Query: 5 HFFREL 10
HF+R+L
Sbjct: 364 HFYRDL 369


>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25

Query: 5 HFFREL 10
HF+R+L
Sbjct: 362 HFYRDL 367


>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21

Query: 5 HFFREL 10
HF+R+L
Sbjct: 364 HFYRDL 369


>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20

Query: 5 HFFREL 10
HF+R+L
Sbjct: 363 HFYRDL 368


>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19

Query: 5 HFFREL 10
HF+R+L
Sbjct: 362 HFYRDL 367


>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15

Query: 5 HFFREL 10
HF+R+L
Sbjct: 369 HFYRDL 374


>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14

Query: 5 HFFREL 10
HF+R+L
Sbjct: 363 HFYRDL 368


>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12

Query: 5 HFFREL 10
HF+R+L
Sbjct: 364 HFYRDL 369


>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9

Query: 5 HFFREL 10
HF+R+L
Sbjct: 369 HFYRDL 374


>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8

Query: 5 HFFREL 10
HF+R+L
Sbjct: 364 HFYRDL 369


>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5

Query: 5 HFFREL 10
HF+R+L
Sbjct: 364 HFYRDL 369


>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7

Query: 1 EGVSHFFREL 10
E SH FRE+
Sbjct: 308 EPPSHHFREM 317


>sp|VPX_HV2RO|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 EGVSHFFREL 10
E V+H REL
Sbjct: 35 EAVNHLPREL 44


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 4 SHFFREL 10
SH F+EL
Sbjct: 3238 SHHFKEL 3244


>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 1 EGVSHFFR 8
EG++ F+R
Sbjct: 460 EGINDFYR 467


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 1 EGVSHFFR 8
EG++ F+R
Sbjct: 460 EGINDFYR 467


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 1 EGVSHFFR 8
EG++ F+R
Sbjct: 460 EGINDFYR 467


>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 1 EGVSHFFR 8
EG++ F+R
Sbjct: 460 EGINDFYR 467


>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)

Query: 5 HFFRE 9
HF+RE
Sbjct: 405 HFYRE 409


>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)

Query: 5 HFFRE 9
HF+RE
Sbjct: 405 HFYRE 409


>sp|VPX_HV2D1|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 EGVSHFFREL 10
E V+H REL
Sbjct: 35 EAVNHLPREL 44


>sp|VPX_HV2ST|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 EGVSHFFREL 10
E V+H REL
Sbjct: 35 EAVNHLPREL 44


>sp|VPX_HV2G1|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 EGVSHFFREL 10
E V+H REL
Sbjct: 35 EAVNHLPREL 44


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 4 SHFFREL 10
SH +REL
Sbjct: 1201 SHMWREL 1207


>sp|VPX_HV2CA|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 EGVSHFFREL 10
E V+H REL
Sbjct: 35 EAVNHLPREL 44


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 1 EGVSHFFREL 10
+ +S FFR+L
Sbjct: 1929 QDLSDFFRDL 1938


>sp|VPX_HV2SB|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 EGVSHFFREL 10
E V+H REL
Sbjct: 35 EAVNHLPREL 44


>sp|VPX_HV2NZ|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 EGVSHFFREL 10
E V+H REL
Sbjct: 35 EAVNHHPREL 44


>sp|VPX_HV2BE|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 EGVSHFFREL 10
E V+H REL
Sbjct: 35 EAVNHLPREL 44


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4 SHFFREL 10
+HF+R+L
Sbjct: 372 AHFWRDL 378


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 SHFFREL 10
+HF+R+L
Sbjct: 372 AHFWRDL 378


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4 SHFFREL 10
+HF+R+L
Sbjct: 372 AHFWRDL 378




11|Sequence|51|60|FFRELAEEKR

>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1 FFRELAEEKR 10
FR LA EK+
Sbjct: 2889 LFRHLAREKK 2898


>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1

Query: 1 FFRELAEE 8
FF ELA E
Sbjct: 19 FFEELARE 26


>sp|UL24_HHV11|PROTEIN UL24|Human herpesvirus 1 (strain 17)

Query: 1 FFRELAEEKR 10
F++ LAEE R
Sbjct: 25 FYKALAEEVR 34


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2 FRELAEEK 9
FR+LAE +
Sbjct: 1350 FRKLAERR 1357


>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 FFRELAEEKR 10
FFR EE+R
Sbjct: 404 FFRRRTEEER 413




12|Sequence|56|65|AEEKREGYER

>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980

Query: 1 AEEKREGYE 9
+EE R GYE
Sbjct: 367 SEESRSGYE 375


>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979

Query: 1 AEEKREGYE 9
+EE R GYE
Sbjct: 367 SEESRSGYE 375


>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977

Query: 1 AEEKREGYE 9
+EE R GYE
Sbjct: 367 SEESRSGYE 375


>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993

Query: 1 AEEKREGYE 9
+EE R GYE
Sbjct: 367 SEELRSGYE 375


>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong

Query: 1 AEEKREGYE 9
EE R GYE
Sbjct: 367 GEELRSGYE 375


>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978

Query: 1 AEEKREGYE 9
++E R GYE
Sbjct: 367 SDESRSGYE 375


>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978

Query: 1 AEEKREGYE 9
++E R GYE
Sbjct: 367 SDESRSGYE 375


>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977

Query: 1 AEEKREGYE 9
+E+ R GYE
Sbjct: 367 SEDSRSGYE 375


>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 1 AEEKREGYE 9
+E+ R GYE
Sbjct: 367 SEDSRSGYE 375


>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976

Query: 1 AEEKREGYE 9
+E+ R GYE
Sbjct: 367 SEDSRSGYE 375


>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975

Query: 1 AEEKREGYE 9
+E+ R GYE
Sbjct: 367 SEDSRSGYE 375


>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975

Query: 1 AEEKREGYE 9
+E+ R GYE
Sbjct: 367 SEDSRSGYE 375


>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port

Query: 1 AEEKREGYE 9
+E+ R GYE
Sbjct: 367 SEDSRSGYE 375


>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972

Query: 1 AEEKREGYE 9
+E+ R GYE
Sbjct: 367 SEDSRSGYE 375


>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972

Query: 1 AEEKREGYE 9
+E+ R GYE
Sbjct: 367 SEDSRSGYE 375


>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972

Query: 1 AEEKREGYE 9
+E+ R GYE
Sbjct: 367 SEDSRSGYE 375


>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972

Query: 1 AEEKREGYE 9
+E+ R GYE
Sbjct: 367 SEDSRSGYE 375


>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957

Query: 2 EEKREGYE 9
+E R GYE
Sbjct: 368 KESRSGYE 375


>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996

Query: 1 AEEKREGYE 9
+E+ R GYE
Sbjct: 367 SEKLRSGYE 375


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 4 KREGYE 9
KREGY+
Sbjct: 1042 KREGYK 1047


>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 AEEKREGYER 10
+EE+R Y++
Sbjct: 102 SEEQRASYQK 111


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 AEEKREGYER 10
+EE+R Y++
Sbjct: 102 SEEQRASYQK 111


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 1 AEEKREGYER 10
A+E+R G E+
Sbjct: 86 ADERRRGLEQ 95


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 1 AEEKREGYER 10
A+E+R G E+
Sbjct: 86 ADERRRGLEQ 95


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 EKREGYE 9
EK+ GYE
Sbjct: 857 EKKLGYE 863


>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 1 AEEKREGYE 9
+++ R GYE
Sbjct: 344 SKDSRSGYE 352


>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971

Query: 1 AEEKREGYE 9
+++ R GYE
Sbjct: 367 SKDSRSGYE 375


>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970

Query: 1 AEEKREGYE 9
+++ R GYE
Sbjct: 367 SKDSRSGYE 375


>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957

Query: 1 AEEKREGYE 9
+++ R GYE
Sbjct: 367 SKDSRSGYE 375


>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957

Query: 1 AEEKREGYE 9
+++ R GYE
Sbjct: 367 SKDSRSGYE 375




13|Sequence|61|70|EGYERLLKMQ

>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1 EGYERLLKM 9
EG+ERL +M
Sbjct: 3160 EGWERLTRM 3168


>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 EGYERLL 7
+G+ERLL
Sbjct: 844 QGFERLL 850


>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 1 EGYERLLKMQ 10
EG+ LLK Q
Sbjct: 250 EGFHTLLKRQ 259


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4 ERLLKM 9
ERLLKM
Sbjct: 2632 ERLLKM 2637


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4 ERLLKM 9
ERLLKM
Sbjct: 2632 ERLLKM 2637


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 2 GYERLL 7
GYER+L
Sbjct: 581 GYERVL 586


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 2 GYERLLKMQ 10
GY+ +L+MQ
Sbjct: 1692 GYKSVLQMQ 1700


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2 GYERLLKMQ 10
GY+ +L+MQ
Sbjct: 1692 GYKSVLQMQ 1700


>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7

Query: 1 EGYERLLKMQ 10
EG+ LLK Q
Sbjct: 249 EGFHTLLKGQ 258


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 GYERLLK 8
GY+ LLK
Sbjct: 316 GYDELLK 322




14|Sequence|66|75|LLKMQNQRGG

>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 3 KMQNQRGG 10
K QN+RGG
Sbjct: 100 KKQNKRGG 107


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 3 KMQNQRGG 10
K QN+RGG
Sbjct: 100 KKQNKRGG 107


>sp|U131A_HCMVM|PROTEIN UL131A|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 LKMQNQRGG 10
+ QN+RGG
Sbjct: 92 FRRQNRRGG 100


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 3 KMQNQRGG 10
+ QN+RGG
Sbjct: 100 RKQNKRGG 107


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 3 KMQNQRGG 10
+ QN+RGG
Sbjct: 100 RKQNKRGG 107


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3 KMQNQRGG 10
+ QN+RGG
Sbjct: 100 RKQNKRGG 107


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 3 KMQNQRGG 10
+ QN+RGG
Sbjct: 26 RKQNKRGG 33


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3 KMQNQRGG 10
+ QN+RGG
Sbjct: 100 RKQNKRGG 107


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 3 KMQNQRGG 10
+ QN+RGG
Sbjct: 100 RKQNKRGG 107


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 3 KMQNQRGG 10
+ QN+RGG
Sbjct: 100 RKQNKRGG 107


>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)

Query: 1 LLKMQNQRG 9
LLK+QN G
Sbjct: 231 LLKIQNHGG 239


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 3 KMQNQRGG 10
+MQ RGG
Sbjct: 108 RMQTGRGG 115


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 3 KMQNQRGG 10
+MQ RGG
Sbjct: 108 RMQTGRGG 115


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 3 KMQNQRGG 10
+MQ RGG
Sbjct: 108 RMQTGRGG 115


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 3 KMQNQRGG 10
+MQ RGG
Sbjct: 108 RMQTGRGG 115


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 3 KMQNQRGG 10
+MQ RGG
Sbjct: 108 RMQTGRGG 115


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 3 KMQNQRGG 10
+MQ RGG
Sbjct: 108 RMQTGRGG 115


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 3 KMQNQRGG 10
+MQ RGG
Sbjct: 108 RMQTGRGG 115


>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 MQNQRG 9
+QNQRG
Sbjct: 702 LQNQRG 707


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 4 MQNQRGG 10
MQ RGG
Sbjct: 109 MQTGRGG 115


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 4 MQNQRGG 10
MQ RGG
Sbjct: 109 MQTGRGG 115




15|Sequence|71|80|NQRGGRALFQ

>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 2 QRGGRALFQ 10
QRG RAL Q
Sbjct: 894 QRGTRALLQ 902


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 2 QRGGRALFQ 10
QRG RAL Q
Sbjct: 894 QRGTRALLQ 902


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 2 QRGGRALFQ 10
QRG RAL Q
Sbjct: 894 QRGTRALLQ 902


>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22

Query: 2 QRGGRA 7
QRGGRA
Sbjct: 274 QRGGRA 279


>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate

Query: 2 QRGGRA 7
QRGGR+
Sbjct: 73 QRGGRS 78


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 QRGGRALFQ 10
QR GRA+
Sbjct: 834 QRAGRAILH 842


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 QRGGRA 7
+RGGRA
Sbjct: 2127 ERGGRA 2132


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 QRGGRA 7
+RGGRA
Sbjct: 2127 ERGGRA 2132


>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 NQRGGR 6
NQR GR
Sbjct: 48 NQRSGR 53


>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 QRGGRALF 9
QR GRA+
Sbjct: 824 QRAGRAIL 831


>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)

Query: 3 RGGRAL 8
+GGRAL
Sbjct: 360 KGGRAL 365


>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 RGGRAL 8
+GGRAL
Sbjct: 360 KGGRAL 365


>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973

Query: 2 QRGGRALFQ 10
Q+G LFQ
Sbjct: 439 QKGAEVLFQ 447


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 4 GGRALFQ 10
GGRAL Q
Sbjct: 200 GGRALKQ 206




16|Sequence|76|85|RALFQDIKKP

>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1 RALFQDIKK 9
R +F DIKK
Sbjct: 1498 RKVFNDIKK 1506


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1 RALFQDIKK 9
RAL+ ++KK
Sbjct: 2374 RALYDEVKK 2382


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 1 RALFQDIKK 9
R +F DIK+
Sbjct: 1499 RKVFNDIKR 1507


>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)

Query: 2 ALFQDIKK 9
AL QDIK+
Sbjct: 235 ALIQDIKR 242


>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)

Query: 1 RALFQDIKKP 10
RAL + +KKP
Sbjct: 404 RALAEVLKKP 413


>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)

Query: 1 RALFQDIKKP 10
RAL + +KKP
Sbjct: 404 RALAEVLKKP 413


>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)

Query: 1 RALFQDIKKP 10
RAL + +KKP
Sbjct: 404 RALAEVLKKP 413


>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)

Query: 1 RALFQDIKKP 10
RAL + +KKP
Sbjct: 404 RALAEVLKKP 413


>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)

Query: 1 RALFQDIKKP 10
RAL + +KKP
Sbjct: 404 RALAEVLKKP 413


>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)

Query: 1 RALFQDIKKP 10
RAL + +KKP
Sbjct: 404 RALAEVLKKP 413


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 3 LFQDIKKP 10
+F D+K P
Sbjct: 1699 VFSDVKSP 1706


>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)

Query: 1 RALFQDIKKP 10
RAL + +KKP
Sbjct: 404 RALAEVLKKP 413




17|Sequence|81|90|DIKKPAEDEW

>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1 DIKKPAEDEW 10
D K+P++D W
Sbjct: 233 DNKRPSDDSW 242


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 3 KKPAEDEW 10
K+P++D W
Sbjct: 233 KQPSDDNW 240


>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)

Query: 2 IKKPAEDEW 10
IK P +EW
Sbjct: 279 IKSPFGEEW 287


>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)

Query: 2 IKKPAEDEW 10
IK P +EW
Sbjct: 279 IKSPFGEEW 287


>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)

Query: 2 IKKPAEDEW 10
+KK + DEW
Sbjct: 489 MKKYSPDEW 497


>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)

Query: 2 IKKPAEDEW 10
+KK + DEW
Sbjct: 489 MKKYSPDEW 497


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 5 PAEDEW 10
PAED W
Sbjct: 536 PAEDYW 541


>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28

Query: 1 DIKKPAEDEW 10
DI PA +W
Sbjct: 414 DIITPASTQW 423


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 DIKKPAEDE 9
D+K P +DE
Sbjct: 1231 DLKVPTKDE 1239


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 2 IKKPAEDEW 10
+KK + DEW
Sbjct: 491 MKKYSPDEW 499


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2 IKKPAEDE 9
+K+P ED+
Sbjct: 1172 LKRPPEDD 1179


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 IKKPAEDE 9
+K+P ED+
Sbjct: 1177 LKRPPEDD 1184


>sp|VIF_HV192|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 IKKPAEDEW 10
+KK ED W
Sbjct: 166 VKKLVEDRW 174


>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 PAEDEW 10
P ED W
Sbjct: 664 PGEDSW 669


>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 IKKPAEDEW 10
+KK ED W
Sbjct: 166 VKKLTEDRW 174


>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P

Query: 3 KKPAEDEW 10
K P E +W
Sbjct: 565 KGPGETDW 572


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 5 PAEDEW 10
PA+D W
Sbjct: 240 PAQDIW 245


>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 IKKPAEDEW 10
+KK ED W
Sbjct: 166 VKKLTEDRW 174


>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 PAEDEW 10
P ED W
Sbjct: 663 PGEDSW 668


>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 IKKPAEDEW 10
+KK ED W
Sbjct: 166 VKKLTEDRW 174


>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3

Query: 1 DIKKPAEDEW 10
DI PA +W
Sbjct: 414 DILLPASAQW 423


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 4 KPAEDEW 10
KP E +W
Sbjct: 1334 KPVEGDW 1340


>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 IKKPAEDEW 10
+KK ED W
Sbjct: 166 VKKLTEDRW 174


>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 IKKPAEDEW 10
+KK ED W
Sbjct: 166 VKKLVEDRW 174


>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 IKKPAEDEW 10
+KK ED W
Sbjct: 166 VKKLTEDRW 174


>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2 IKKPAEDEW 10
+KK ED W
Sbjct: 166 VKKLTEDRW 174




18|Sequence|86|95|AEDEWGKTPD

>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 AEDEWGKT 8
+++EWG T
Sbjct: 95 SDNEWGST 102


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 4 EWGKT 8
EWGKT
Sbjct: 1955 EWGKT 1959


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 4 EWGKT 8
EWGKT
Sbjct: 1955 EWGKT 1959


>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United

Query: 3 DEWGKTPD 10
++W K+PD
Sbjct: 314 EKWFKSPD 321


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 971 WGKTP 975


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 968 WGKTP 972


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 976 WGKTP 980


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 982 WGKTP 986


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 970 WGKTP 974


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 970 WGKTP 974


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 967 WGKTP 971


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 967 WGKTP 971


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 969 WGKTP 973


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 975 WGKTP 979


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 970 WGKTP 974


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 982 WGKTP 986


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 982 WGKTP 986


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 965 WGKTP 969


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 966 WGKTP 970


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 980 WGKTP 984


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 970 WGKTP 974


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 970 WGKTP 974


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 974 WGKTP 978


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 3 DEWGKTP 9
+EW K+P
Sbjct: 988 EEWHKSP 994


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 971 WGKTP 975


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 965 WGKTP 969


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 965 WGKTP 969


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 967 WGKTP 971


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WGKTP
Sbjct: 980 WGKTP 984


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 4 EWGKT 8
EWGKT
Sbjct: 2074 EWGKT 2078


>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /

Query: 1 AEDEWGKTPD 10
+D+W PD
Sbjct: 375 GDDKWKMLPD 384


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 2 EDEWGKTP 9
+D W +TP
Sbjct: 2005 QDTWTETP 2012


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 2 EDEWGKTP 9
+D W +TP
Sbjct: 2004 QDTWTETP 2011


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 2 EDEWGKTP 9
+D W +TP
Sbjct: 2004 QDTWTETP 2011


>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21

Query: 2 EDEWGKTP 9
+D+W K+P
Sbjct: 143 DDQWHKSP 150


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 3 DEWGKTP 9
DEW TP
Sbjct: 3343 DEWRDTP 3349


>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)

Query: 1 AEDEWGKTPD 10
+D+W PD
Sbjct: 375 GDDKWKLLPD 384


>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 AEDEWGKT 8
AED W T
Sbjct: 76 AEDNWSVT 83


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 WGKTP 9
WG+TP
Sbjct: 970 WGRTP 974


>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63

Query: 5 WGKTPD 10
WG+ PD
Sbjct: 301 WGEMPD 306


>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AEDEWGK 7
AED W K
Sbjct: 170 AEDRWNK 176


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 EDEWGKTP 9
+ WG TP
Sbjct: 542 DSRWGITP 549


>sp|PG161_VARV|PROTEIN OPG161|Variola virus

Query: 2 EDEWG 6
ED WG
Sbjct: 148 EDTWG 152


>sp|PG161_VAR67|PROTEIN OPG161|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 EDEWG 6
ED WG
Sbjct: 148 EDTWG 152


>sp|PG161_VACCC|PROTEIN OPG161|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 EDEWG 6
ED WG
Sbjct: 149 EDTWG 153


>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8

Query: 1 AEDEWGKT 8
A+D+W KT
Sbjct: 142 ADDKWHKT 149


>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 AEDEWGK 7
AED W K
Sbjct: 170 AEDRWNK 176


>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)

Query: 1 AEDEWGKTPD 10
A+D G TP+
Sbjct: 1059 AQDAGGSTPE 1068




19|Sequence|91|100|GKTPDAMKAA

>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)

Query: 1 GKTPDAMKA 9
GK PD KA
Sbjct: 44 GKAPDLNKA 52


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 2 KTPDAMK 8
K PDA+K
Sbjct: 150 KLPDALK 156


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2 KTPDAMK 8
K PDA+K
Sbjct: 150 KLPDALK 156


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 2 KTPDAMK 8
K PDA+K
Sbjct: 150 KLPDALK 156


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 2 KTPDAMK 8
K PDA+K
Sbjct: 150 KLPDALK 156


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 2 KTPDAMK 8
K PDA+K
Sbjct: 150 KLPDALK 156


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 2 KTPDAMK 8
K PDA+K
Sbjct: 150 KLPDALK 156


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 2 KTPDAMK 8
K PDA+K
Sbjct: 148 KLPDALK 154


>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1

Query: 2 KTPDAMKAA 10
+TPDA+ A
Sbjct: 220 RTPDALTVA 228


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2 KTPDAMK 8
K PDA+K
Sbjct: 150 KFPDALK 156


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 2 KTPDAMK 8
K PDA+K
Sbjct: 150 KLPDALK 156


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 2 KTPDAMK 8
K PDA+K
Sbjct: 150 KLPDALK 156


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 2 KTPDAMK 8
K PDA+K
Sbjct: 150 KLPDALK 156




20|Sequence|96|105|AMKAAMALEK

***** No hits found ******


21|Sequence|101|110|MALEKKLNQA

>sp|PG044_VACCC|PROTEIN K7|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 LEKKLN 8
LEKKLN
Sbjct: 144 LEKKLN 149


>sp|PG044_VACCA|PROTEIN K7|Vaccinia virus (strain Ankara) (VACV)

Query: 3 LEKKLN 8
LEKKLN
Sbjct: 144 LEKKLN 149


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 2 ALEKKLN 8
ALE+K+N
Sbjct: 1216 ALERKIN 1222


>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)

Query: 1 MALEKKLNQ 9
+ALE+KL +
Sbjct: 471 LALERKLKK 479


>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)

Query: 1 MALEKKLNQ 9
+ALE+KL +
Sbjct: 469 LALERKLKK 477


>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)

Query: 1 MALEKKLNQ 9
+ALE+KL +
Sbjct: 476 LALERKLKK 484


>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)

Query: 1 MALEKKLNQ 9
+ALE+KL +
Sbjct: 476 LALERKLKK 484


>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)

Query: 1 MALEKKLNQ 9
+ALE+KL +
Sbjct: 471 LALERKLKK 479


>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)

Query: 1 MALEKKLNQ 9
+ALE+KL +
Sbjct: 467 LALERKLKK 475


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 1 MALEKKLNQ 9
+ALE+KL +
Sbjct: 477 LALERKLKK 485


>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong

Query: 1 MALEKKLNQ 9
+ALE+KL +
Sbjct: 468 LALERKLKK 476


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 1 MALEKKLNQ 9
+ALE+KL +
Sbjct: 468 LALERKLKK 476


>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United

Query: 1 MALEKKLN 8
M LE+K+N
Sbjct: 504 MDLERKIN 511


>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)

Query: 1 MALEKKLNQ 9
+ALE+KL +
Sbjct: 476 LALERKLKK 484


>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)

Query: 1 MALEKKLNQ 9
+ALE+KL +
Sbjct: 478 LALERKLKK 486


>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)

Query: 1 MALEKKLNQ 9
+ALE+KL +
Sbjct: 478 LALERKLKK 486


>sp|PG044_MONPV|PROTEIN K7|Monkeypox virus (MPXV)

Query: 3 LEKKLN 8
LEKK+N
Sbjct: 144 LEKKMN 149




22|Sequence|106|115|KLNQALLDLH

>sp|PG038_VARV|EARLY protein OPG038|Variola virus

Query: 1 KLNQALLDL 9
+LNQ LLD+
Sbjct: 201 ELNQCLLDI 209


>sp|PG038_VAR67|EARLY protein OPG038|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 KLNQALLDL 9
+LNQ LLD+
Sbjct: 201 ELNQCLLDI 209


>sp|PG038_VACCC|EARLY protein OPG038|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 KLNQALLDL 9
+LNQ LLD+
Sbjct: 201 ELNQCLLDI 209


>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)

Query: 1 KLNQALLDL 9
+LNQ LLD+
Sbjct: 201 ELNQCLLDI 209


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 2 LNQALLDLH 10
+NQ LDLH
Sbjct: 1455 MNQPELDLH 1463


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 LNQALLDL 9
++QALLDL
Sbjct: 2262 VDQALLDL 2269


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 LNQALLDL 9
++QALLDL
Sbjct: 2259 VDQALLDL 2266


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2 LNQALLDLH 10
LN++L+DL
Sbjct: 1193 LNESLIDLQ 1201


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2 LNQALLDLH 10
LN++L+DL
Sbjct: 1175 LNESLIDLQ 1183


>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)

Query: 2 LNQALLDL 9
+ QALLDL
Sbjct: 251 IRQALLDL 258


>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus

Query: 1 KLNQALLD 8
K+N+ LLD
Sbjct: 36 KINEGLLD 43


>sp|NCAP_DUGBV|NUCLEOPROTEIN virus

Query: 2 LNQALLDL 9
+ QALLDL
Sbjct: 250 IRQALLDL 257


>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61

Query: 2 LNQALLD 8
+N+ALLD
Sbjct: 395 MNKALLD 401


>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 LNQALLDLH 10
L ALL LH
Sbjct: 301 LKSALLKLH 309


>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LNQALLDLH 10
L ALL LH
Sbjct: 300 LKSALLKLH 308


>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 KLNQALLD 8
K+N LLD
Sbjct: 36 KINDGLLD 43




23|Sequence|111|120|LLDLHALGSA

>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 LDLHALGSA 10
+DL+ALG A
Sbjct: 361 IDLYALGQA 369


>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 LDLHALGSA 10
+DL+ALG A
Sbjct: 361 IDLYALGQA 369


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 2 LDLHALG 8
+D+HALG
Sbjct: 714 VDVHALG 720


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 2 LDLHALG 8
+D+HALG
Sbjct: 714 VDVHALG 720


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 2 LDLHALG 8
+D+HALG
Sbjct: 713 VDVHALG 719


>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)

Query: 2 LDLHAL 7
+DLHAL
Sbjct: 606 MDLHAL 611


>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 LDLHALGS 9
LD+H+L S
Sbjct: 69 LDIHSLTS 76


>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)

Query: 2 LDLHALGS 9
LD+H+L S
Sbjct: 69 LDIHSLTS 76


>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)

Query: 2 LDLHALGS 9
LD+H+L S
Sbjct: 69 LDIHSLTS 76


>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)

Query: 1 LLDLHAL 7
LLDLH +
Sbjct: 245 LLDLHVV 251


>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)

Query: 1 LLDLHAL 7
LLDLH +
Sbjct: 245 LLDLHVV 251




24|Sequence|116|125|ALGSARTDPH

>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 3 GSARTDPH 10
G A+TDP
Sbjct: 1352 GKAKTDPQ 1359


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 5 ARTDPH 10
ART PH
Sbjct: 76 ARTAPH 81


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 5 ARTDPH 10
ART PH
Sbjct: 76 ARTAPH 81


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 1 ALGSARTDP 9
ALG+A +DP
Sbjct: 1207 ALGAAASDP 1215


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 2 LGSARTD 8
+GS RTD
Sbjct: 576 MGSLRTD 582


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 LGSARTD 8
+GS RTD
Sbjct: 576 MGSLRTD 582


>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P

Query: 3 GSARTD 8
G+ARTD
Sbjct: 233 GTARTD 238


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1 ALGSARTD 8
ALG RTD
Sbjct: 1947 ALGMRRTD 1954




25|Sequence|121|130|RTDPHLCDFL

>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)

Query: 1 RTDPHL 6
RTDPH+
Sbjct: 167 RTDPHV 172


>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)

Query: 1 RTDPHL 6
RTDPH+
Sbjct: 166 RTDPHV 171


>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)

Query: 1 RTDPHL 6
RTDPH+
Sbjct: 167 RTDPHV 172


>sp|YVEE_VACCC|UNCHARACTERIZED 7.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 PHLCD 8
PH+CD
Sbjct: 53 PHICD 57


>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 RTDPHLCD 8
RTDP CD
Sbjct: 200 RTDPSRCD 207


>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 RTDPHLCD 8
RTDP CD
Sbjct: 200 RTDPSRCD 207


>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8

Query: 1 RTDPHLCDFL 10
R P+LC F+
Sbjct: 528 RNSPNLCGFV 537


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 3 DPHLCDFL 10
+PH+ DFL
Sbjct: 1034 EPHVRDFL 1041


>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)

Query: 4 PHLCDF 9
PHL DF
Sbjct: 319 PHLMDF 324


>sp|ARBH_HHV8P|APOPTOSIS regulator Bcl-2 homolog|Human herpesvirus 8 type P

Query: 3 DPHLCDF 9
+PHL DF
Sbjct: 104 EPHLRDF 110


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 1 RTDPHLCDFL 10
+ DP CD L
Sbjct: 223 KADPPSCDLL 232


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 RTDPHLCDFL 10
+ +PH D+L
Sbjct: 420 KVEPHTGDYL 429


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1 RTDPHLCDFL 10
+ +PH D+L
Sbjct: 423 KVEPHTGDYL 432


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 RTDPHLCDFL 10
+ +PH D+L
Sbjct: 423 KVEPHTGDYL 432


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1 RTDPHLCDFL 10
+TD HL FL
Sbjct: 2243 QTDNHLAIFL 2252


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1 RTDPHLCDFL 10
+TD HL FL
Sbjct: 2244 QTDNHLAVFL 2253


>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 3 DPHLCDFL 10
DP L D+L
Sbjct: 114 DPTLADYL 121


>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 DPHLCDFL 10
DP L D+L
Sbjct: 114 DPTLADYL 121


>sp|PG165_VACCC|PROTEIN OPG165|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 DPHLCD 8
D H+CD
Sbjct: 169 DRHICD 174


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1 RTDPHLCDFL 10
+TD HL F+
Sbjct: 2245 QTDSHLAVFM 2254


>sp|MATRX_HMPVC|MATRIX protein|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 6 LCDFL 10
LCDF+
Sbjct: 146 LCDFM 150


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 4 PHLCD 8
P+LCD
Sbjct: 223 PYLCD 227


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 4 PHLCD 8
P+LCD
Sbjct: 223 PYLCD 227


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 4 PHLCD 8
P+LCD
Sbjct: 223 PYLCD 227


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 4 PHLCD 8
P+LCD
Sbjct: 223 PYLCD 227


>sp|PG165_MONPV|PROTEIN OPG165|Monkeypox virus (MPXV)

Query: 3 DPHLCD 8
D H+CD
Sbjct: 174 DRHICD 179


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 4 PHLCD 8
P+LCD
Sbjct: 223 PYLCD 227


>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 HLCDF 9
HLCD
Sbjct: 36 HLCDL 40


>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 HLCDF 9
HLCD
Sbjct: 36 HLCDL 40


>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)

Query: 2 TDPHLCDF 9
TDP C F
Sbjct: 265 TDPFSCTF 272


>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1 RTDPH 5
R+DPH
Sbjct: 669 RSDPH 673


>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 TDPHLCDFL 10
D H C++L
Sbjct: 192 ADAHTCEYL 200


>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 TDPHLCDFL 10
D H C++L
Sbjct: 192 ADAHTCEYL 200


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 6 LCDFL 10
LCDFL
Sbjct: 969 LCDFL 973


>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P

Query: 5 HLCDFL 10
+CDFL
Sbjct: 294 QICDFL 299


>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P

Query: 3 DPHLCDFL 10
DP LC+ L
Sbjct: 126 DPALCEKL 133


>sp|VP12_CTFVL|UNCHARACTERIZED protein VP12|Colorado tick fever virus (strain

Query: 2 TDPHLCD 8
PH+C+
Sbjct: 154 ASPHICE 160




26|Sequence|126|135|LCDFLETHFL

>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 LCDFLETHFL 10
L D++ETH L
Sbjct: 318 LHDYVETHLL 327


>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 LCDFLETHFL 10
L D++ETH L
Sbjct: 318 LHDYVETHLL 327


>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 LCDFLETHFL 10
L D++ETH L
Sbjct: 318 LHDYVETHLL 327


>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)

Query: 3 DFLETHFL 10
DF+ HFL
Sbjct: 146 DFITKHFL 153


>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 LCDFLE 6
CDFLE
Sbjct: 475 FCDFLE 480


>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 LCDFLE 6
CDFLE
Sbjct: 475 FCDFLE 480


>sp|TEG7_HHV7J|TEGUMENT protein UL51 homolog|Human herpesvirus 7 (strain JI)

Query: 1 LCDFLETHF 9
L DFLET +
Sbjct: 31 LLDFLETKY 39


>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus

Query: 2 CDFLETHFL 10
CD+ E H L
Sbjct: 177 CDYDEPHHL 185


>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United

Query: 1 LCDFLETHF 9
+C F+ HF
Sbjct: 63 VCPFIHEHF 71


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 5 LETHF 9
LETHF
Sbjct: 326 LETHF 330


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 5 LETHF 9
LETHF
Sbjct: 326 LETHF 330


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2 CDFLETH 8
CD E H
Sbjct: 206 CDMFEKH 212


>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 LCDFLETHFL 10
LC F + H+
Sbjct: 425 LCHFADRHYF 434


>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)

Query: 3 DFLETHF 9
DF+E H
Sbjct: 433 DFIEVHL 439


>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human

Query: 3 DFLETHFL 10
DFL H L
Sbjct: 112 DFLHCHIL 119


>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 3 DFLETHF 9
DF+E H
Sbjct: 433 DFIEVHL 439


>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 2 CDFLE 6
CDFL+
Sbjct: 221 CDFLQ 225




27|Sequence|131|140|ETHFLDEEVK

>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1 ETHFLD 6
E HFLD
Sbjct: 1774 EAHFLD 1779


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 ETHFLD 6
E HFLD
Sbjct: 1774 EAHFLD 1779


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1 ETHFLD 6
E HFLD
Sbjct: 1774 EAHFLD 1779


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 ETHFLD 6
E HFLD
Sbjct: 1774 EAHFLD 1779


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 ETHFLD 6
E HFLD
Sbjct: 1774 EAHFLD 1779


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1 ETHFLD 6
E HFLD
Sbjct: 1774 EAHFLD 1779


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 ETHFLD 6
E HFLD
Sbjct: 1774 EAHFLD 1779


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 ETHFLD 6
E HFLD
Sbjct: 1774 EAHFLD 1779


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 ETHFLD 6
E HFLD
Sbjct: 1774 EAHFLD 1779


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1 ETHFLD 6
E HFLD
Sbjct: 1778 EAHFLD 1783


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 ETHFLD 6
E HFLD
Sbjct: 1758 EAHFLD 1763


>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 ETHFLDE 7
+TH+L+E
Sbjct: 208 QTHYLEE 214


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 3 HFLDEEVK 10
HF DE ++
Sbjct: 931 HFTDERIE 938


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 3 HFLDEEVK 10
HF DE ++
Sbjct: 932 HFTDERIE 939


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 3 HFLDEEVK 10
HF DE ++
Sbjct: 931 HFTDERIE 938


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 3 HFLDEEVK 10
HF DE ++
Sbjct: 933 HFTDERIE 940


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 3 HFLDEEVK 10
HF DE ++
Sbjct: 933 HFTDERIE 940


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 3 HFLDEEVK 10
HF DE ++
Sbjct: 932 HFTDERIE 939


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 3 HFLDEEVK 10
HF DE ++
Sbjct: 931 HFTDERIE 938


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 ETHFLD 6
E HF+D
Sbjct: 1769 EAHFMD 1774


>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain

Query: 4 FLDEEVK 10
FLD E+K
Sbjct: 461 FLDREIK 467


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 2 THFLDEEVK 10
THF EEV+
Sbjct: 841 THFDIEEVE 849


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2 THFLDEEVK 10
THF EEV+
Sbjct: 841 THFDIEEVE 849


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1 ETHFLD 6
E HF+D
Sbjct: 1785 EAHFID 1790


>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain

Query: 2 THFLDEE 8
T F+DEE
Sbjct: 113 TRFVDEE 119


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 3 HFLDEEV 9
HFL +EV
Sbjct: 447 HFLGDEV 453


>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain

Query: 2 THFLDEE 8
T F+DEE
Sbjct: 113 TRFVDEE 119


>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)

Query: 2 THFLDEE 8
T F+DEE
Sbjct: 113 TRFVDEE 119


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 3 HFLDEEV 9
HFL +EV
Sbjct: 447 HFLGDEV 453


>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)

Query: 1 ETHFLDEEVK 10
+ +FLDEE K
Sbjct: 50 DMNFLDEEGK 59


>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)

Query: 1 ETHFLDEEVK 10
+ +FLDEE K
Sbjct: 50 DMNFLDEEGK 59


>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann

Query: 1 ETHFLDEEVK 10
+ +FLDEE K
Sbjct: 50 DMNFLDEEGK 59


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 4 FLDEEVK 10
F DEEV+
Sbjct: 832 FFDEEVQ 838


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 4 FLDEEVK 10
F DEEV+
Sbjct: 832 FFDEEVQ 838


>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate

Query: 2 THFLDEE 8
T F+DEE
Sbjct: 113 TRFVDEE 119


>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)

Query: 1 ETHFLDEEVK 10
+ +FLDEE K
Sbjct: 50 DMNFLDEEGK 59


>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann

Query: 1 ETHFLDEEVK 10
+ +FLDEE K
Sbjct: 50 DMNFLDEEGK 59


>sp|PAX_I33A0|PROTEIN PA-X|Influenza A virus (strain A/Wilson-Smith/1933

Query: 3 HFLDEE 8
HF+DE+
Sbjct: 52 HFIDEQ 57




28|Sequence|136|145|DEEVKLIKKM

>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1 DEEVKLIKKM 10
D EVKLI+++
Sbjct: 2188 DSEVKLIERL 2197


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 DEEVKLIKKM 10
D EVKLI+++
Sbjct: 2188 DSEVKLIERL 2197


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1 DEEVKLIKKM 10
D+E+K+IK++
Sbjct: 674 DDEMKVIKRI 683


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 1 DEEVKLIKK 9
D+E+KLI++
Sbjct: 674 DDEMKLIRR 682


>sp|VTF3L_MONPZ|INTERMEDIATE transcription factor 3 large|Monkeypox virus (strain Zaire-96-I-16)

Query: 1 DEEVKLIKKM 10
DE++ LIKKM
Sbjct: 275 DEKLFLIKKM 284


>sp|VITF3_VARV|INTERMEDIATE transcription factor 3 large|Variola virus

Query: 1 DEEVKLIKKM 10
DE++ LIKKM
Sbjct: 275 DEKLFLIKKM 284


>sp|VITF3_VAR67|INTERMEDIATE transcription factor 3 large|Variola virus (isolate

Query: 1 DEEVKLIKKM 10
DE++ LIKKM
Sbjct: 275 DEKLFLIKKM 284


>sp|VTF3L_VACCT|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Tian Tan)

Query: 1 DEEVKLIKKM 10
DE++ LIKKM
Sbjct: 275 DEKLFLIKKM 284


>sp|VTF3L_VACCA|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Ankara) (VACV)

Query: 1 DEEVKLIKKM 10
DE++ LIKKM
Sbjct: 275 DEKLFLIKKM 284


>sp|VITF3_VACCC|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Copenhagen)

Query: 1 DEEVKLIKKM 10
DE++ LIKKM
Sbjct: 275 DEKLFLIKKM 284


>sp|VITF3_MONPV|INTERMEDIATE transcription factor 3 large|Monkeypox virus (MPXV)

Query: 1 DEEVKLIKKM 10
DE++ LIKKM
Sbjct: 275 DEKLFLIKKM 284


>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 DEEVKLIKKM 10
D E+ L KKM
Sbjct: 575 DNEIFLTKKM 584


>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 DEEVKLIKKM 10
D E+ L KKM
Sbjct: 575 DNEIFLTKKM 584


>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 DEEVKLIKKM 10
D E+ L KKM
Sbjct: 575 DNEIFLTKKM 584


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1 DEEVKLIK 8
+EE KL+K
Sbjct: 1129 EEEAKLVK 1136


>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain

Query: 1 DEEVKLIKKM 10
D E+K KKM
Sbjct: 463 DREIKTTKKM 472


>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate

Query: 1 DEEVKLIKKM 10
D E+K KKM
Sbjct: 463 DREIKTTKKM 472


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 DEEVKLIKKM 10
D E K+I +M
Sbjct: 3072 DNEAKIIDQM 3081


>sp|M1_I02A1|MATRIX protein 1|Influenza A virus (strain A/Guinea

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 87 DRAVKLYKKL 96


>sp|M1_I02A4|MATRIX protein 1|Influenza A virus (strain A/Silky

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103


>sp|M1_I02A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103


>sp|M1_I01A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103


>sp|M1_I01A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103


>sp|M1_I02A5|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103


>sp|M1_I01A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103


>sp|M1_I00A0|MATRIX protein 1|Influenza A virus (strain A/Duck/Hong

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103


>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)

Query: 1 DEEVKLIKK 9
DE LIKK
Sbjct: 509 DESTNLIKK 517


>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103


>sp|M1_I02A7|MATRIX protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 92 DRAVKLYKKL 101


>sp|M1_I03A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103


>sp|M1_I05A1|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103


>sp|M1_I03A0|MATRIX protein 1|Influenza A virus (strain A/Hong

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103


>sp|M1_I02A6|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103


>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky

Query: 1 DEEVKLIKKM 10
D VKL KK+
Sbjct: 94 DRAVKLYKKL 103




29|Sequence|141|150|LIKKMGDHLT

>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 2 IKKMGDH 8
+KK+ DH
Sbjct: 1289 VKKINDH 1295




30|Sequence|146|155|GDHLTNLHRL

>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)

Query: 5 TNLHRL 10
TNLHRL
Sbjct: 414 TNLHRL 419


>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)

Query: 2 DHLTNLHRL 10
D+LT+LH L
Sbjct: 858 DYLTSLHAL 866


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 2 DHLTNLHRL 10
D+LT+LH L
Sbjct: 859 DYLTSLHGL 867


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 DHLTNLHRL 10
D+LT+LH L
Sbjct: 859 DYLTSLHGL 867


>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)

Query: 2 DHLTNLHR 9
+HL LHR
Sbjct: 89 EHLCALHR 96


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2 DHLTNL 7
DHLTN+
Sbjct: 125 DHLTNI 130


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2 DHLTNL 7
DHLTN+
Sbjct: 125 DHLTNI 130


>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)

Query: 3 HLTNLHR 9
HL NL+R
Sbjct: 73 HLKNLNR 79


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 3 HLTNLH 8
HL NLH
Sbjct: 341 HLINLH 346


>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn

Query: 2 DHLTNLHRL 10
DH+ LH L
Sbjct: 229 DHVNTLHFL 237


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1999 DYLCNSHHL 2007


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1998 DYLCNSHHL 2006


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 2000 DYLCNSHHL 2008


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1998 DYLCNSHHL 2006


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 2008 DYLCNSHHL 2016


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1996 DYLCNSHHL 2004


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 2001 DYLCNSHHL 2009


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1989 DYLCNSHHL 1997


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1989 DYLCNSHHL 1997


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1990 DYLCNSHHL 1998


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1988 DYLCNSHHL 1996


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1988 DYLCNSHHL 1996


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1990 DYLCNSHHL 1998


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1990 DYLCNSHHL 1998


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1992 DYLCNSHHL 2000


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 1987 DYLCNSHHL 1995


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 2 DHLTNLHRL 10
D+L N H L
Sbjct: 2006 DYLCNSHHL 2014




31|Sequence|151|160|NLHRLGGPEA

>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 3 HRLGGPE 9
+RL GPE
Sbjct: 2066 YRLSGPE 2072


>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)

Query: 2 LHRLGGP 8
L+RL GP
Sbjct: 224 LYRLAGP 230


>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 LHRLGGP 8
L+RL GP
Sbjct: 224 LYRLAGP 230


>sp|VE6_HPV41|PROTEIN E6|Human papillomavirus type 41

Query: 1 NLHRLGG 7
++HR+GG
Sbjct: 136 SVHRIGG 142


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 2 LHRLGGPEA 10
LH LGG A
Sbjct: 921 LHNLGGEYA 929


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 LHRLGGPEA 10
LH LGG A
Sbjct: 921 LHNLGGEYA 929


>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 NLHRLGGPE 9
N+H L PE
Sbjct: 370 NIHWLKSPE 378


>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant

Query: 1 NLHRLGGPE 9
N+H L PE
Sbjct: 370 NIHWLKSPE 378


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 LHRLG 6
LHRLG
Sbjct: 2999 LHRLG 3003


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 LHRLG 6
LHRLG
Sbjct: 2999 LHRLG 3003


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 LHRLG 6
LHRLG
Sbjct: 2999 LHRLG 3003


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 LHRLG 6
LHRLG
Sbjct: 2999 LHRLG 3003


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 LHRLG 6
LHRLG
Sbjct: 2999 LHRLG 3003


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2 LHRLGG 7
LH LGG
Sbjct: 109 LHSLGG 114


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2 LHRLGG 7
LH LGG
Sbjct: 109 LHSLGG 114


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2 LHRLGG 7
LH LGG
Sbjct: 109 LHSLGG 114


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2 LHRLGG 7
LH LGG
Sbjct: 109 LHSLGG 114


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2 LHRLGG 7
LH LGG
Sbjct: 109 LHSLGG 114


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2 LHRLGG 7
LH LGG
Sbjct: 109 LHSLGG 114


>sp|NP1_HBOC1|NON-STRUCTURAL protein NP-1|Primate bocaparvovirus 1 (strain Human

Query: 3 HRLGGPEA 10
HR PEA
Sbjct: 97 HRASNPEA 104


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 2 LHRLGG 7
LH++GG
Sbjct: 726 LHKVGG 731


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 HRLGGP 8
HR+ GP
Sbjct: 2284 HRIAGP 2289


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 3 HRLGGP 8
HR+ GP
Sbjct: 2257 HRIAGP 2262


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 3 HRLGGP 8
HR+ GP
Sbjct: 2262 HRIAGP 2267


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 LHRLGG 7
L+RLGG
Sbjct: 1625 LYRLGG 1630




32|Sequence|156|165|GGPEAGLGEY

>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 GPEAGLGEY 10
GPE L EY
Sbjct: 379 GPEHSLAEY 387


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 GPEAGLGEY 10
GPE L EY
Sbjct: 379 GPEHSLAEY 387


>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)

Query: 2 GPEAGL 7
GPE+GL
Sbjct: 296 GPESGL 301


>sp|TAT_HV2SB|PROTEIN Tat|Human immunodeficiency virus type 2

Query: 2 GPEAGLGEY 10
PE+ LG Y
Sbjct: 7 APESSLGSY 15


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 5 AGLGEY 10
AGLGE+
Sbjct: 76 AGLGEF 81


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2 GPEAGLGEY 10
GP +G GE+
Sbjct: 289 GPPSGSGEH 297


>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)

Query: 4 EAGLGE 9
E+GLGE
Sbjct: 610 ESGLGE 615


>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)

Query: 2 GPEAGLGEY 10
GP+A G+Y
Sbjct: 289 GPKASGGDY 297


>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 GPEAGLGEY 10
GP+A G+Y
Sbjct: 289 GPKASGGDY 297


>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 GPEAGLGEY 10
GP+A G+Y
Sbjct: 289 GPKASGGDY 297




33|Sequence|161|175|GLGEYLFERLTLKHD

>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P

Query: 1 GLGEYLFERLTLKHD 15
GL YLF RL + HD
Sbjct: 120 GLANYLFHRLGVTHD 134


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 LGEYLFERL 10
LGEY+FER+
Sbjct: 5505 LGEYIFERI 5513


>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)

Query: 7 FERLTLKHD 15
E+LTL+HD
Sbjct: 214 LEKLTLEHD 222


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 1 GLGEYLFERLTLKHD 15
LG YLF LK+D
Sbjct: 30 ALGSYLFNGPYLKND 44


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 LGEYLFER 9
LG YLF+R
Sbjct: 208 LGRYLFQR 215


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 LGEYLFER 9
LG YLF+R
Sbjct: 208 LGRYLFQR 215


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 LGEYLFER 9
LG YLF+R
Sbjct: 208 LGRYLFQR 215


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2 LGEYLFERLTL 12
LGEY+F++ L
Sbjct: 5492 LGEYVFDKSEL 5502


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2 LGEYLFERLTL 12
LGEY+F++ L
Sbjct: 5530 LGEYVFDKSEL 5540


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2 LGEYLFERLTL 12
LGEY+F++ L
Sbjct: 5550 LGEYVFDKSEL 5560


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2 LGEYLFERLTL 12
LGEY+F++ L
Sbjct: 5580 LGEYVFDKSEL 5590


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2 LGEYLFERLTLKHD 15
+GE++FE++ D
Sbjct: 5165 IGEFIFEKVEYGSD 5178


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 7 FERLTLKHD 15
FER LKH+
Sbjct: 1086 FERTKLKHE 1094


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 1 GLGEYLFERLTLKHD 15
LG Y+F LK+D
Sbjct: 30 ALGSYIFNGPYLKND 44


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 1 GLGEYLFERLTLKHD 15
LG Y+F LK+D
Sbjct: 30 ALGSYIFNGPYLKND 44


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 LGEYLFER 9
+GEY FE+
Sbjct: 5519 IGEYTFEK 5526


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 LGEYLFER 9
+GEY FE+
Sbjct: 5496 IGEYTFEK 5503


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1 GLGEYL 6
GLGEYL
Sbjct: 1884 GLGEYL 1889


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2 LGEYLFERLTLKHD 15
+GE++FE++ D
Sbjct: 5190 VGEFVFEKVDYGSD 5203


>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1

Query: 1 GLGEYLFER 9
GLG +LF R
Sbjct: 93 GLGHFLFCR 101


>sp|PG029_MONPV|IFN signaling evasion protein OPG029|Monkeypox virus (MPXV)

Query: 2 LGEYLFERLTLKH 14
L EY+F+ L H
Sbjct: 122 LMEYIFDDTDLSH 134


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 GLGEYLFERLTL 12
G G+Y+F ++ L
Sbjct: 184 GYGDYIFWKIPL 195


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 GLGEYLFERLTL 12
G G+Y+F ++ L
Sbjct: 184 GYGDYIFWKIPL 195


>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 2 LGEYLFER 9
+GEYL E+
Sbjct: 222 IGEYLLEQ 229


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 2 LGEYLFER 9
+GEYL E+
Sbjct: 222 IGEYLLEQ 229


>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 1 GLGEYLFERLTLKH 14
GLG + +L ++H
Sbjct: 211 GLGSFRLFQLIMRH 224


>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 1 GLGEYLFERLTLKH 14
GLG + +L ++H
Sbjct: 211 GLGSFRLFQLIMRH 224


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 7 FERLTLKHD 15
FER KH+
Sbjct: 995 FERTKFKHE 1003


>sp|NS1_HRSVA|NON-STRUCTURAL protein 1|Human respiratory syncytial virus A

Query: 3 GEYLFERLTLKH 14
G Y++E + L H
Sbjct: 86 GGYIWEMMELTH 97


>sp|NS1_HRSV|NON-STRUCTURAL protein 1|Human respiratory syncytial virus

Query: 3 GEYLFERLTLKH 14
G Y++E + L H
Sbjct: 86 GGYIWEMMELTH 97


>sp|NS1_HRSS2|NON-STRUCTURAL protein 1|Human respiratory syncytial virus A

Query: 3 GEYLFERLTLKH 14
G Y++E + L H
Sbjct: 86 GGYIWEMMELTH 97


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 7 FERLTLKHD 15
E+LT +HD
Sbjct: 215 LEKLTAEHD 223


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 4 EYLFERLTLKHD 15
+ LFE + + HD
Sbjct: 2086 DVLFEWINITHD 2097


>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])

Query: 6 LFERLTLKHD 15
LF+ L++ HD
Sbjct: 195 LFKTLSVNHD 204


>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])

Query: 6 LFERLTLKHD 15
LF+ L++ HD
Sbjct: 195 LFKTLSVNHD 204


>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)

Query: 6 LFERLTLKHD 15
LF+ L++ HD
Sbjct: 195 LFKTLSVNHD 204


>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 7 FERLTLKHD 15
+RLT +HD
Sbjct: 214 LDRLTQEHD 222


>sp|VPR_HV19N|PROTEIN Vpr|Human immunodeficiency virus type 1

Query: 1 GLGEYLF 7
GLG+Y++
Sbjct: 41 GLGQYIY 47


>sp|VPR_HV1AN|PROTEIN Vpr|Human immunodeficiency virus type 1

Query: 1 GLGEYLFE 8
LG+Y++E
Sbjct: 41 ALGQYIYE 48


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1 GLGEYLFERLTL 12
G G+Y+F ++ +
Sbjct: 185 GYGDYIFWKIPI 196


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1 GLGEYLFERLTL 12
G G+Y+F ++ +
Sbjct: 185 GYGDYIFWKIPI 196


>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33

Query: 2 LGEYLFERLTLK 13
LG+Y F + LK
Sbjct: 440 LGKYTFWEVDLK 451


>sp|VPR_HV1A2|PROTEIN Vpr|Human immunodeficiency virus type 1

Query: 2 LGEYLFE 8
LG+Y++E
Sbjct: 42 LGQYIYE 48


>sp|NS1_HRSVB|NON-STRUCTURAL protein 1|Human respiratory syncytial virus B

Query: 3 GEYLFERLTLKH 14
G Y++E + L H
Sbjct: 86 GGYIWELIELTH 97


>sp|NS1_HRSV1|NON-STRUCTURAL protein 1|Human respiratory syncytial virus B

Query: 3 GEYLFERLTLKH 14
G Y++E + L H
Sbjct: 86 GGYIWELIELTH 97


>sp|VPR_HV1JR|PROTEIN Vpr|Human immunodeficiency virus type 1

Query: 2 LGEYLFE 8
LG+Y++E
Sbjct: 42 LGQYIYE 48


>sp|VPR_HV1ET|PROTEIN Vpr|Human immunodeficiency virus type 1

Query: 2 LGEYLFE 8
LG+Y++E
Sbjct: 42 LGQYIYE 48


>sp|VPR_HV1Z2|PROTEIN Vpr|Human immunodeficiency virus type 1

Query: 2 LGEYLFE 8
LG+Y++E
Sbjct: 42 LGQYIYE 48




34|Sequence|166|175|LFERLTLKHD

>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)

Query: 2 FERLTLKHD 10
E+LTL+HD
Sbjct: 214 LEKLTLEHD 222


>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P

Query: 1 LFERLTLKHD 10
LF RL + HD
Sbjct: 125 LFHRLGVTHD 134


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 FERLTLKHD 10
FER LKH+
Sbjct: 1086 FERTKLKHE 1094


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 2 FERLTLKHD 10
E+LT +HD
Sbjct: 215 LEKLTAEHD 223


>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 2 FERLTLKHD 10
+RLT +HD
Sbjct: 214 LDRLTQEHD 222


>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])

Query: 1 LFERLTLKHD 10
LF+ L++ HD
Sbjct: 195 LFKTLSVNHD 204


>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])

Query: 1 LFERLTLKHD 10
LF+ L++ HD
Sbjct: 195 LFKTLSVNHD 204


>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)

Query: 1 LFERLTLKHD 10
LF+ L++ HD
Sbjct: 195 LFKTLSVNHD 204


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1 LFERLTLKHD 10
LFE + + HD
Sbjct: 2088 LFEWINITHD 2097


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 3 ERLTLKH 9
+RL LKH
Sbjct: 420 DRLKLKH 426


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2 FERLTLKHD 10
FER KH+
Sbjct: 995 FERTKFKHE 1003


>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)

Query: 2 FERLTLKHD 10
++LTL+H+
Sbjct: 214 LDKLTLEHE 222






THE END