FRIL_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|SYNQRIQSSM

>sp|GUAAA_METS3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanobrevibacter

Query: 2 YNQRIQSSM 10
YN RIQ S+
Sbjct: 12 YNHRIQRSL 20




2|SequenceR|15|6|AEVDTSYNQR

>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 EVDTSYNQ 9
EVDTSY++
Sbjct: 67 EVDTSYSK 74


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 EVDTSYNQR 10
EVDT NQR
Sbjct: 205 EVDTFVNQR 213


>sp|THS3_HALVD|CHAPERONIN subunit CTT3|Haloferax volcanii (strain ATCC 29605

Query: 1 AEVDTSYN 8
+EVDT YN
Sbjct: 249 SEVDTEYN 256


>sp|RL18_HALSA|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain

Query: 2 EVDTSYNQR 10
EV T Y+QR
Sbjct: 16 EVRTDYHQR 24


>sp|RL18_HALS3|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain

Query: 2 EVDTSYNQR 10
EV T Y+QR
Sbjct: 16 EVRTDYHQR 24


>sp|RL18_HALVD|LARGE ribosomal subunit protein uL18|Haloferax volcanii (strain ATCC

Query: 2 EVDTSYNQR 10
EV T Y+QR
Sbjct: 16 EVRTDYHQR 24


>sp|RL18_HALMT|LARGE ribosomal subunit protein uL18|Haloferax mediterranei (strain

Query: 2 EVDTSYNQR 10
EV T Y+QR
Sbjct: 16 EVRTDYHQR 24


>sp|RL18_HALLT|LARGE ribosomal subunit protein uL18|Halorubrum lacusprofundi (strain

Query: 2 EVDTSYNQR 10
EV T Y+QR
Sbjct: 16 EVRTDYHQR 24




3|SequenceR|20|11|LSNVAAEVDT

>sp|MPCT_HALS3|TRANSDUCER protein MpcT|Halobacterium salinarum (strain ATCC 29341

Query: 1 LSNVAAEVDT 10
L+N+AAE+DT
Sbjct: 295 LNNIAAEMDT 304


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LSNVAAEVD 9
L+ VAAEVD
Sbjct: 40 LAGVAAEVD 48


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LSNVAAEVDT 10
+ N+A EVDT
Sbjct: 763 IRNIAVEVDT 772


>sp|SYDND_METM5|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C5 /

Query: 4 VAAEVDT 10
VAAE+DT
Sbjct: 119 VAAEIDT 125


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 LSNVAAEVD 9
+S +AAE+D
Sbjct: 287 ISEIAAEID 295




4|SequenceR|25|16|LYLNVLSNVA

>sp|HMDH_ARCFU|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LYLNVLSNVA 10
+YL ++SN+A
Sbjct: 224 VYLRIISNLA 233


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 LYLNVLSNV 9
++LN +SNV
Sbjct: 98 VFLNAISNV 106




5|SequenceR|30|21|TYSAQLYLNV

>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TYSAQLYLN 9
+Y AQ++LN
Sbjct: 99 SYEAQVFLN 107


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 TYSAQLYLNV 10
TYSA +YL +
Sbjct: 97 TYSAPIYLEL 106


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii

Query: 1 TYSAQLYLNV 10
TYS LYL +
Sbjct: 86 TYSVPLYLEM 95


>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 2 YSAQLYLNV 10
YSA LYL +
Sbjct: 86 YSAPLYLEM 94


>sp|Y1384_METJA|PUTATIVE nitroreductase MJ1384|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TYSAQLYLNV 10
TY ++Y+NV
Sbjct: 65 TYPLEIYVNV 74




6|SequenceR|35|26|GLSLYTYSAQ

>sp|Y360_CALMQ|PROTEIN Cmaq_0360|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GLSLYTYSAQ 10
G +YTY AQ
Sbjct: 182 GTRVYTYEAQ 191


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 2 LSLYTYS 8
++LYTYS
Sbjct: 209 ITLYTYS 215


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 2 LSLYTYS 8
++LYTYS
Sbjct: 209 ITLYTYS 215


>sp|THII_SULTO|PROBABLE tRNA sulfurtransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GLSLYTYSA 9
G SLY YS+
Sbjct: 119 GSSLYPYSS 127




7|SequenceR|40|31|RDFYFGLSLY

>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RDFYFGLS 8
RDFY GL+
Sbjct: 235 RDFYIGLT 242


>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum

Query: 1 RDFYFGLS 8
RDF++GL+
Sbjct: 14 RDFFYGLA 21


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DFYFGLSL 9
D+YFG++L
Sbjct: 171 DWYFGINL 178


>sp|DLDH_HALSA|DIHYDROLIPOYL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DFYFGLS 8
DF+FGL+
Sbjct: 236 DFHFGLA 242


>sp|PURA_THEGJ|ADENYLOSUCCINATE synthetase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 FGLSLY 10
FGLSLY
Sbjct: 181 FGLSLY 186


>sp|PURA_PYRSS|ADENYLOSUCCINATE synthetase|Pyrococcus sp. (strain ST700)

Query: 5 FGLSLY 10
FGLSLY
Sbjct: 181 FGLSLY 186


>sp|PURA_PYRHO|ADENYLOSUCCINATE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 FGLSLY 10
FGLSLY
Sbjct: 181 FGLSLY 186


>sp|PURA_PYRFU|ADENYLOSUCCINATE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 FGLSLY 10
FGLSLY
Sbjct: 181 FGLSLY 186


>sp|PURA_PYRAB|ADENYLOSUCCINATE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 5 FGLSLY 10
FGLSLY
Sbjct: 181 FGLSLY 186


>sp|PURA_METST|ADENYLOSUCCINATE synthetase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 FGLSLY 10
FGLSLY
Sbjct: 181 FGLSLY 186


>sp|PURA_ARCFU|ADENYLOSUCCINATE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FGLSLY 10
FGLSLY
Sbjct: 178 FGLSLY 183


>sp|PURA_THESM|ADENYLOSUCCINATE synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 5 FGLSLY 10
FGLSLY
Sbjct: 181 FGLSLY 186


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 FGLSLY 10
FGLSLY
Sbjct: 181 FGLSLY 186


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 FGLSLY 10
FGLSLY
Sbjct: 181 FGLSLY 186


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 5 FGLSLY 10
FGLSLY
Sbjct: 181 FGLSLY 186


>sp|KDGK_THEAC|2-DEHYDRO-3-DEOXYGLUCONOKINASE acidophilum (strain ATCC 25905

Query: 4 YFGLSLY 10
YFG+ LY
Sbjct: 185 YFGMDLY 191


>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 2 DFYFGLSLY 10
DF+ GLS++
Sbjct: 188 DFFAGLSVF 196


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 2 DFYFGL 7
DFYFG+
Sbjct: 444 DFYFGV 449




8|SequenceR|45|36|LAVDDRDFYF

>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LAVDDRDFYF 10
+ VD+++FYF
Sbjct: 285 ITVDEKEFYF 294


>sp|Y535_METJA|UNCHARACTERIZED protein MJ0535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAVDDRDFYF 10
LA+ DRD YF
Sbjct: 106 LALKDRDLYF 115


>sp|ANTRP_HALVD|PROBABLE anion ABC transporter permease|Haloferax volcanii (strain ATCC

Query: 1 LAVDDRDFY 9
LAV RDFY
Sbjct: 39 LAVGFRDFY 47


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 AVDDRDFY 9
VDD++FY
Sbjct: 315 GVDDKEFY 322


>sp|PSTB_HALWD|PHOSPHATE import ATP-binding protein PstB|Haloquadratum walsbyi (strain DSM

Query: 1 LAVDDRDFYF 10
L VDD D Y+
Sbjct: 48 LGVDDLDVYY 57


>sp|PSTB2_HALSA|PHOSPHATE import ATP-binding protein PstB|Halobacterium salinarum (strain

Query: 1 LAVDDRDFY 9
+A+DDRD Y
Sbjct: 147 VALDDRDVY 155


>sp|LYSZ_PYRFU|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrococcus furiosus

Query: 1 LAVDDRDFYF 10
LA+D ++ YF
Sbjct: 178 LAMDAKELYF 187


>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 VDDRDFY 9
V++RDFY
Sbjct: 69 VNERDFY 75


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VDDRDFYF 10
+DD DF F
Sbjct: 261 IDDADFVF 268


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 3 VDDRDFYF 10
+DD DF F
Sbjct: 262 IDDADFVF 269


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 VDDRDFY 9
VD+RD Y
Sbjct: 73 VDERDIY 79


>sp|PRIS_PYRAE|DNA primase small subunit PriS|Pyrobaculum aerophilum (strain ATCC

Query: 2 AVDDRDFYF 10
AVD R+F F
Sbjct: 21 AVDKREFAF 29


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 3 VDDRDFYF 10
V+D +FYF
Sbjct: 278 VEDGEFYF 285


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 DRDFYF 10
DRD YF
Sbjct: 368 DRDLYF 373


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 3 VDDRDFY 9
VD+RD Y
Sbjct: 73 VDERDIY 79


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 3 VDDRDFY 9
VD+RD Y
Sbjct: 73 VDERDIY 79


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 VDDRDFY 9
VD+RD Y
Sbjct: 73 VDERDIY 79


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 3 VDDRDFY 9
VD+RD Y
Sbjct: 73 VDERDIY 79




9|SequenceR|50|41|HSVGELAVDD

>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HSVGELAVDD 10
H+V ELA DD
Sbjct: 29 HNVFELASDD 38


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 1 HSVGELAVDD 10
H+V ELA DD
Sbjct: 29 HNVFELASDD 38


>sp|DHYS1_ARCFU|PROBABLE deoxyhypusine synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HSVGELAVDD 10
H +G VDD
Sbjct: 96 HEIGSCYVDD 105


>sp|BLH_HALSA|PROBABLE beta-carotene 15,15'-dioxygenase Blh|Halobacterium salinarum

Query: 2 SVGELAVDD 10
SVG+LAV D
Sbjct: 182 SVGDLAVFD 190




10|SequenceR|55|46|LERFFHSVGE

>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 2 ERFFHSVG 9
E FFHS+G
Sbjct: 801 EYFFHSIG 808


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 1 LERFFHSVGE 10
LERFF +GE
Sbjct: 22 LERFFSDLGE 31


>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 RFFHSVGE 10
R+FH +GE
Sbjct: 131 RWFHDIGE 138


>sp|Y2141_ARCFU|UNCHARACTERIZED protein AF_2141|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LERFFHSVGE 10
+ER+F ++GE
Sbjct: 137 VERYFRAIGE 146


>sp|Y132_THEON|MEMO1 family protein TON_0132|Thermococcus onnurineus (strain NA1)

Query: 1 LERFFHSVGE 10
LE+FF +GE
Sbjct: 22 LEKFFRDLGE 31


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RFFHSVGE 10
R HSVGE
Sbjct: 396 RIIHSVGE 403


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RFFHSVGE 10
R HSVGE
Sbjct: 396 RIIHSVGE 403


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 1 LERFFHSVGE 10
LE+FF +GE
Sbjct: 22 LEKFFSDLGE 31


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RFFHSVGE 10
RF HS GE
Sbjct: 182 RFVHSAGE 189


>sp|PDXS_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Metallosphaera sedula (strain

Query: 1 LERFFHSVGE 10
+ERFF+ + E
Sbjct: 11 VERFFYKLAE 20


>sp|ILVC_METMA|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina mazei (strain ATCC

Query: 1 LERFFHSV 8
LER +HSV
Sbjct: 244 LERMWHSV 251


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 1 LERFFHSV 8
LER +HSV
Sbjct: 244 LERMWHSV 251


>sp|LIVG_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus (strain

Query: 2 ERFFHSV 8
ER FHSV
Sbjct: 108 ERIFHSV 114


>sp|ILVC_METAC|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 1 LERFFHSV 8
LER +HSV
Sbjct: 244 LERMWHSV 251


>sp|Y1799_ARCFU|UPF0111 protein AF_1799|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RFFHSVGE 10
+FF SVGE
Sbjct: 2 KFFRSVGE 9


>sp|Y1638_PYRFU|MEMO1 family protein PF1638|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LERFFHSVGE 10
L+RFF +GE
Sbjct: 22 LKRFFTDLGE 31


>sp|PRIS_METTP|DNA primase small subunit PriS|Methanothrix thermoacetophila (strain

Query: 2 ERFFHSVG 9
ERF H +G
Sbjct: 183 ERFIHKIG 190


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LERFFH 6
LE+FFH
Sbjct: 395 LEQFFH 400


>sp|Y1433_METJA|UNCHARACTERIZED protein MJ1433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FFHSVGE 10
FF+SVGE
Sbjct: 80 FFNSVGE 86


>sp|DNAG_METTH|DNA primase DnaG|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LERFFHSVG 9
+E+F+H +G
Sbjct: 269 VEQFYHDLG 277


>sp|Y539_PYRAB|MEMO1 family protein PYRAB05390|Pyrococcus abyssi (strain GE5 /

Query: 1 LERFFHSVGE 10
LE FF +GE
Sbjct: 22 LEEFFRDLGE 31


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 2 ERFFHSVGE 10
+R HS+GE
Sbjct: 66 DRLVHSLGE 74


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 RFFHSVG 9
RFF+S+G
Sbjct: 1364 RFFNSIG 1370


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LERFFHSVGE 10
L RFF +GE
Sbjct: 4 LSRFFIELGE 13


>sp|KTHY1_SULTO|PROBABLE thymidylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LERFFHS 7
++R+FHS
Sbjct: 84 MDRYFHS 90


>sp|Y334_METJA|UNCHARACTERIZED protein MJ0334|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LERFFHSVGE 10
+E+F+H V +
Sbjct: 49 MEQFYHEVSQ 58


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RFFHSVGE 10
+F HS GE
Sbjct: 179 KFVHSAGE 186


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RFFHSVGE 10
+F HS GE
Sbjct: 184 KFVHSAGE 191


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 3 RFFHSVGE 10
+F HS GE
Sbjct: 179 KFVHSAGE 186


>sp|TOP6A_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 LERFFHSVGE 10
LER F +VGE
Sbjct: 67 LEREFLNVGE 76


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 2 ERFFHSVGE 10
+RFFH V +
Sbjct: 180 KRFFHDVAK 188


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 3 RFFHSVGE 10
+F HS GE
Sbjct: 182 KFVHSAGE 189


>sp|HIS7_METMJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LERFFHSV 8
+E FFHS+
Sbjct: 134 IEHFFHSL 141




11|SequenceR|60|51|RKEEALERFF

>sp|MTRA2_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter

Query: 3 EEALERF 9
EEA+ERF
Sbjct: 123 EEAIERF 129


>sp|HMD_METVO|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus voltae

Query: 3 EEALERFF 10
EEA+E FF
Sbjct: 221 EEAVENFF 228


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 1 RKEEALERF 9
RKEE +ER+
Sbjct: 2 RKEEIIERY 10


>sp|RADB_THEON|DNA repair and recombination protein|Thermococcus onnurineus (strain

Query: 3 EEALERFF 10
EEAL+RF
Sbjct: 74 EEALQRFI 81


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 RKEEALER 8
R EEALER
Sbjct: 1170 RLEEALER 1177


>sp|SRP54_PYRFU|SIGNAL recognition particle 54 kDa|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KEEALERFF 10
KEE +ERF
Sbjct: 316 KEEDIERFL 324


>sp|CSM2_METJA|CRISPR system Cms protein Csm2|Methanocaldococcus jannaschii (strain

Query: 1 RKEEALERF 9
RK+EALE+
Sbjct: 86 RKKEALEKL 94




12|SequenceR|65|56|REYGERKEEA

>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 1 REYGERKEE 9
R+YGER EE
Sbjct: 322 RKYGERIEE 330


>sp|NARC_HALMT|PROBABLE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 REYGERKEEA 10
R+Y E+ EEA
Sbjct: 473 RQYTEQAEEA 482


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 1 REYGERKE 8
R YGE++E
Sbjct: 306 RRYGEKEE 313


>sp|APGM_METST|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaera stadtmanae (strain ATCC

Query: 1 REYGER 6
+EYGER
Sbjct: 373 KEYGER 378


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 REYGERKEE 9
RE GE+KE+
Sbjct: 162 RELGEKKEK 170


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 REYGERKEEA 10
R YGE EEA
Sbjct: 297 RRYGEFIEEA 306


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EYGERKEEA 10
EYG KEEA
Sbjct: 524 EYGLDKEEA 532




13|SequenceR|70|61|QMKLLREYGE

>sp|HIS5_PICTO|IMIDAZOLE glycerol phosphate synthase subunit|Picrophilus torridus (strain

Query: 2 MKLLREYGE 10
+KLLR +GE
Sbjct: 176 LKLLRNFGE 184


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 MKLLREY 8
MKLLREY
Sbjct: 731 MKLLREY 737


>sp|DPO4_SACS2|DNA polymerase IV|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 MKLLREYGE 10
M LLREY E
Sbjct: 89 MNLLREYSE 97


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 1 QMKLLREYG 9
M L+REYG
Sbjct: 147 DMALVREYG 155


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 MKLLREYG 9
M L+REYG
Sbjct: 148 MALVREYG 155


>sp|Y856_PYRHO|UNCHARACTERIZED protein PH0856|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KLLREYGE 10
KL+++YGE
Sbjct: 53 KLIKKYGE 60


>sp|KPRS_METS3|RIBOSE-PHOSPHATE pyrophosphokinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 MKLLREYG 9
+K+L+EYG
Sbjct: 237 VKILKEYG 244


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QMKLLREY 8
Q+KLL++Y
Sbjct: 783 QLKLLKDY 790


>sp|NADK_METTH|NAD kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 QMKLLREYGE 10
++ LREYGE
Sbjct: 42 ELPQLREYGE 51


>sp|MTXA_METBF|PUTATIVE methyltransferase Mtx subunit A|Methanosarcina barkeri (strain

Query: 2 MKLLREY 8
MK++REY
Sbjct: 138 MKIVREY 144


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 3 KLLREYG 9
KLLRE+G
Sbjct: 408 KLLREFG 414


>sp|AROK_METM5|SHIKIMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 QMKLLREYGE 10
+MKL+++Y E
Sbjct: 185 RMKLIKDYVE 194


>sp|AROK_METJA|SHIKIMATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QMKLLREYGE 10
+MKL+++Y E
Sbjct: 185 RMKLIKDYVE 194


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KLLREYG 9
KLL EYG
Sbjct: 267 KLLEEYG 273


>sp|FEN_METTP|FLAP endonuclease 1|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 MKLLREYG 9
+KL+RE+G
Sbjct: 248 LKLIREHG 255


>sp|RS4_IGNH4|SMALL ribosomal subunit protein uS4|Ignicoccus hospitalis (strain

Query: 1 QMKLLREYG 9
+MKL+ EYG
Sbjct: 26 EMKLMGEYG 34


>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MKLLREYG 9
+ +LREYG
Sbjct: 259 LNILREYG 266


>sp|NEP1_STAMF|RIBOSOMAL RNA small subunit methyltransferase|Staphylothermus marinus (strain

Query: 4 LLREYGE 10
LLRE+GE
Sbjct: 157 LLREHGE 163


>sp|Y1861_PYRAE|PUTATIVE ankyrin repeat protein PAE1861|Pyrobaculum aerophilum (strain ATCC

Query: 2 MKLLREYG 9
+KLL EYG
Sbjct: 139 VKLLLEYG 146


>sp|AROE_ARCFU|SHIKIMATE dehydrogenase (NADP(+))|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MKLLREYGE 10
+++LR YGE
Sbjct: 153 VEMLRRYGE 161


>sp|RNP2_THESM|RIBONUCLEASE P protein component 2|Thermococcus sibiricus (strain DSM 12597

Query: 1 QMKLLREYG 9
+MK L+E+G
Sbjct: 110 KMKFLKEFG 118




14|SequenceR|75|66|GGRQNQMKLL

>sp|IDI2_AERPE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GGRQNQMKLL 10
GGRQ +KLL
Sbjct: 304 GGRQATLKLL 313




15|SequenceR|80|71|QFLARGGRQN

>sp|Y828_METBU|UPF0210 protein Mbur_0828|Methanococcoides burtonii (strain DSM 6242

Query: 1 QFLARGGR 8
+F+ARGGR
Sbjct: 436 KFIARGGR 443


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 2 FLARGGRQN 10
FLA+ GR N
Sbjct: 303 FLAQAGRLN 311


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 QFLARGG 7
+F+ARGG
Sbjct: 522 EFVARGG 528


>sp|MPCT_HALS3|TRANSDUCER protein MpcT|Halobacterium salinarum (strain ATCC 29341

Query: 1 QFLARGG 7
QFLA GG
Sbjct: 35 QFLAAGG 41


>sp|LYSZ_CENSY|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Cenarchaeum symbiosum

Query: 3 LARGGRQN 10
+ARG R+N
Sbjct: 242 IARGSREN 249




16|SequenceR|85|76|PKKIDQFLAR

>sp|FEN_THEVO|FLAP endonuclease 1|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PKKIDQFL 8
PKKI++FL
Sbjct: 295 PKKIEEFL 302


>sp|Y1497_METJA|UNCHARACTERIZED metallohydrolase MJ1497|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KKIDQFLAR 10
KKID FL++
Sbjct: 241 KKIDDFLSQ 249


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 1 PKKIDQFLA 9
PK +D F+A
Sbjct: 120 PKDVDVFMA 128


>sp|RL31_METJA|LARGE ribosomal subunit protein eL31|Methanocaldococcus jannaschii

Query: 2 KKIDQFLAR 10
KKI QFL R
Sbjct: 33 KKIKQFLKR 41


>sp|GGGPS_HYPBU|GERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PKKIDQFLAR 10
P ID+++AR
Sbjct: 57 PYDIDEYIAR 66


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 1 PKKIDQFLAR 10
PKKI +FL +
Sbjct: 363 PKKIREFLIK 372


>sp|RS7_CENSY|SMALL ribosomal subunit protein uS7|Cenarchaeum symbiosum (strain A)

Query: 1 PKKIDQFLA 9
PK +++FLA
Sbjct: 161 PKSLEEFLA 169


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PKKIDQFL 8
PK+IDQ +
Sbjct: 188 PKEIDQLI 195


>sp|Y658_METJA|UNCHARACTERIZED protein MJ0658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KKIDQFL 8
KK+D+FL
Sbjct: 12 KKLDEFL 18


>sp|PORA_PYRAB|PYRUVATE synthase subunit PorA|Pyrococcus abyssi (strain GE5 /

Query: 1 PKKIDQFLA 9
P+KI +F+A
Sbjct: 37 PEKISEFVA 45


>sp|PORA_PYRHO|PYRUVATE synthase subunit PorA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PKKIDQFLA 9
P+KI +F+A
Sbjct: 37 PEKISEFVA 45


>sp|PORA_PYRFU|PYRUVATE synthase subunit PorA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PKKIDQFLA 9
P+KI +F+A
Sbjct: 37 PEKISEFVA 45




17|SequenceR|90|81|WEDEAPKKID

>sp|APGM_PYRFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEDEAPKKI 9
WEDEA KK+
Sbjct: 179 WEDEASKKV 187


>sp|NADM_PYRAB|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 WEDEAPKKI 9
WED PK +
Sbjct: 142 WEDLVPKSV 150


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WEDEAPKKID 10
W DEAP+ +D
Sbjct: 343 WIDEAPQLLD 352


>sp|NADM_PYRHO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WEDEAPKKI 9
WED PK +
Sbjct: 142 WEDLVPKSV 150


>sp|APGM_PYRAB|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 WEDEAPKKI 9
WEDE KK+
Sbjct: 178 WEDEESKKV 186


>sp|APGM_THEKO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus kodakarensis (strain ATCC

Query: 1 WEDEAPKKI 9
WEDE KK+
Sbjct: 179 WEDEESKKV 187


>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 WEDEAPKKID 10
+ DE PKKI+
Sbjct: 58 YSDELPKKIN 67


>sp|NADM_PYRFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEDEAPKKI 9
WED PK +
Sbjct: 144 WEDLVPKSV 152


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 WEDEAPKKID 10
W DEAP+ +D
Sbjct: 343 WIDEAPELMD 352


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WEDEAPKKID 10
W DEAP+ +D
Sbjct: 343 WIDEAPELMD 352


>sp|PDAD_PYRHO|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WEDEAPKKI 9
W DE PK I
Sbjct: 52 WLDELPKNI 60


>sp|PDAD_PYRAB|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 WEDEAPKKI 9
W DE PK I
Sbjct: 52 WLDELPKNI 60


>sp|PDAD_PYRFU|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEDEAPKKI 9
W DE PK I
Sbjct: 52 WLDELPKNI 60


>sp|RL10_PICTO|LARGE ribosomal subunit protein uL10|Picrophilus torridus (strain ATCC

Query: 3 DEAPKKI 9
DE+PKKI
Sbjct: 88 DESPKKI 94


>sp|Y1852_ARCFU|UNCHARACTERIZED protein AF_1852|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DEAPKKI 9
DE PKKI
Sbjct: 60 DEGPKKI 66


>sp|SUCC1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 3 DEAPKKI 9
DEAP+K+
Sbjct: 329 DEAPRKV 335


>sp|NADM_METLZ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 WEDEAPKKI 9
WE+ PK++
Sbjct: 140 WEEYVPKEV 148


>sp|PDAD_THESM|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 WEDEAPKKI 9
W DE PK I
Sbjct: 52 WIDELPKNI 60


>sp|PDAD1_METAC|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 WEDEAPKK 8
W +EAP K
Sbjct: 131 WTNEAPLK 138


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 WEDEAP 6
W+DEAP
Sbjct: 28 WKDEAP 33


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEDEAPK 7
W +EAP+
Sbjct: 296 WRNEAPR 302


>sp|PTH_THEVO|PEPTIDYL-TRNA hydrolase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WEDEAPKKI 9
W DE KKI
Sbjct: 46 WMDEGQKKI 54


>sp|RFCL_THEVO|REPLICATION factor C large subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WEDEAPKK 8
WE+ +PKK
Sbjct: 32 WEEGSPKK 39


>sp|Y796_METKA|UPF0288 protein MK0796|Methanopyrus kandleri (strain AV19 /

Query: 1 WEDEAPKKID 10
+ED+AP+ ++
Sbjct: 380 YEDDAPRSVE 389


>sp|PSTS_METJA|PHOSPHATE-BINDING protein PstS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEDEAPKKID 10
W+DE KKI+
Sbjct: 167 WDDERIKKIN 176




18|SequenceR|95|86|DPTKGWEDEA

>sp|MTRD_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 1 DPTKGWEDEA 10
DP GW+ EA
Sbjct: 109 DPITGWDQEA 118


>sp|HTPX2_SULAC|PROTEASE HtpX homolog 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DPTKGW 6
DPT GW
Sbjct: 68 DPTYGW 73


>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KGWED 8
KGWED
Sbjct: 355 KGWED 359


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PTKGWED 8
P K WED
Sbjct: 455 PNKSWED 461


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TKGWED 8
T GWED
Sbjct: 488 TSGWED 493


>sp|PYRF_SULTO|OROTIDINE 5'-phosphate decarboxylase|Sulfurisphaera tokodaii (strain DSM

Query: 4 KGWEDE 9
KGW DE
Sbjct: 111 KGWNDE 116


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 PTKGWE 7
P KGWE
Sbjct: 265 PEKGWE 270


>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 1 DPTKGWED 8
+PTKG+ D
Sbjct: 308 EPTKGFRD 315


>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 1 DPTKGWE 7
+P KGWE
Sbjct: 226 NPPKGWE 232


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 2 PTKGWEDEA 10
PTKG+ +A
Sbjct: 366 PTKGYRQKA 374


>sp|Y1618_ARCFU|UNCHARACTERIZED protein AF_1618|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DPTKGW 6
+P KGW
Sbjct: 14 EPLKGW 19


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DPTKGWEDE 9
D TK W DE
Sbjct: 441 DATKKWRDE 449


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 1 DPTKGWEDEA 10
D KGW D+A
Sbjct: 264 DVQKGWTDDA 273


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 3 TKGWEDEA 10
+KG EDEA
Sbjct: 93 SKGQEDEA 100


>sp|DUT_ARCFU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Archaeoglobus

Query: 2 PTKGWE 7
PTKG+E
Sbjct: 153 PTKGYE 158


>sp|KADA_THEVO|ADENYLATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DPTKGWEDEA 10
DPT+ +DE
Sbjct: 124 DPTRARDDEG 133


>sp|RL30_METS3|LARGE ribosomal subunit protein uL30|Methanobrevibacter smithii (strain

Query: 2 PTKGWED 8
P KG+ED
Sbjct: 120 PRKGYED 126


>sp|RIFK_NATPD|RIBOFLAVIN kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DPTK--GWEDE 9
DP K GWED+
Sbjct: 156 DPVKIDGWEDD 166


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TKGWED 8
KGWED
Sbjct: 974 VKGWED 979




19|SequenceR|100|91|AAKMADPTKG

>sp|PDXS_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosphaera stadtmanae

Query: 2 AKMADPTK 9
A+MADP+K
Sbjct: 58 ARMADPSK 65


>sp|PDXS_HALMA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloarcula marismortui (strain

Query: 2 AKMADPTK 9
A+MADP+K
Sbjct: 67 ARMADPSK 74


>sp|PDXS_METTH|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanothermobacter

Query: 2 AKMADPTK 9
A+MADP K
Sbjct: 58 ARMADPNK 65


>sp|PDXS_THEAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma acidophilum

Query: 2 AKMADPTK 9
A+MADP K
Sbjct: 65 ARMADPMK 72


>sp|PDXS_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Picrophilus torridus (strain

Query: 1 AAKMADPTK 9
A+MADP K
Sbjct: 67 VARMADPLK 75


>sp|PDXS_THEVO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma volcanium (strain

Query: 1 AAKMADPTK 9
A+MADP K
Sbjct: 64 VARMADPKK 72


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 KMADPTKG 10
KMADP G
Sbjct: 247 KMADPNFG 254


>sp|PDXS_ARCFU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Archaeoglobus fulgidus (strain

Query: 2 AKMADPTK 9
A+MADP K
Sbjct: 65 ARMADPKK 72


>sp|Y676_METJA|PUTATIVE hydrogenase expression/formation protein MJ0676|Methanocaldococcus

Query: 4 MADPTKG 10
M DPT+G
Sbjct: 218 MKDPTRG 224




20|SequenceR|105|96|KELAMAAKMA

***** No hits found ******


21|SequenceR|110|101|AQNLKKELAM

>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QNLKKELA 9
+N KKELA
Sbjct: 66 ENFKKELA 73


>sp|RIBL_METBF|FAD synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AQNLKKELA 9
A+NL++ELA
Sbjct: 97 AENLEEELA 105




22|SequenceR|115|106|HLDLLAQNLK

>sp|MTSB_METBA|METHYLATED-THIOL--CORRINOID protein MtsB|Methanosarcina barkeri

Query: 1 HLDLLAQNL 9
H+DL QN+
Sbjct: 4 HIDLAVQNI 12


>sp|Y1066_METJA|UNCHARACTERIZED protein MJ1066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HLDLLAQNLK 10
HL L+A N+K
Sbjct: 64 HLSLVALNIK 73


>sp|SYH_SACI1|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LDLLAQNLK 10
LD+L +NLK
Sbjct: 197 LDILEKNLK 205


>sp|SYH_SACI7|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LDLLAQNLK 10
LD+L +NLK
Sbjct: 197 LDILEKNLK 205


>sp|SYH_SACI6|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LDLLAQNLK 10
LD+L +NLK
Sbjct: 197 LDILEKNLK 205


>sp|SYH_SACI4|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LDLLAQNLK 10
LD+L +NLK
Sbjct: 197 LDILEKNLK 205


>sp|SYH_SACI2|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LDLLAQNLK 10
LD+L +NLK
Sbjct: 197 LDILEKNLK 205


>sp|SYH_SACI3|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 LDLLAQNLK 10
LD+L +NLK
Sbjct: 197 LDILEKNLK 205


>sp|SYFB_THEAC|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LDLLAQNLK 10
LDL+A+N K
Sbjct: 417 LDLIARNKK 425


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 HLDLLAQNLK 10
H LAQNL+
Sbjct: 445 HYGTLAQNLR 454




23|SequenceR|120|111|ASGLAHLDLL

>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ASGLAHLDLL 10
A+GLA LD+L
Sbjct: 313 AAGLATLDIL 322


>sp|DNAK_METAR|CHAPERONE protein DnaK|Methanocella arvoryzae (strain DSM 22066

Query: 1 ASGLAHLDLL 10
ASG HLD++
Sbjct: 261 ASGPKHLDMM 270


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 ASGLAHLDL 9
ASGL H DL
Sbjct: 150 ASGLPHNDL 158


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 1 ASGLAHLDL 9
ASGL H DL
Sbjct: 150 ASGLPHNDL 158


>sp|FAEHP_METMA|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ASGLAHLDLL 10
S LAH+DL+
Sbjct: 12 GSELAHVDLM 21


>sp|FAEHP_METAC|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ASGLAHLDLL 10
S LAH+DL+
Sbjct: 12 GSELAHVDLM 21


>sp|PYRH_SULTO|URIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 AHLDLL 10
AHLDLL
Sbjct: 62 AHLDLL 67


>sp|FAEHP_METB6|BIFUNCTIONAL enzyme Fae/Hps|Methanoregula boonei (strain DSM 21154

Query: 4 LAHLDLL 10
LAH+DLL
Sbjct: 15 LAHIDLL 21


>sp|FAEHP_METST|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 LAHLDLL 10
LAH+DL+
Sbjct: 18 LAHIDLI 24


>sp|LYSK_SULAC|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GLAHLDLL 10
G+ HLD+L
Sbjct: 158 GVIHLDIL 165


>sp|LYSK_SULTO|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GLAHLDLL 10
G+ HLD+L
Sbjct: 158 GVLHLDIL 165


>sp|FAEHP_METMJ|BIFUNCTIONAL enzyme Fae/Hps|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 LAHLDLL 10
LAH+DL+
Sbjct: 15 LAHIDLI 21




24|SequenceR|125|116|HPDTRASGLA

>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 29 HPDSLADGMA 38


>sp|METK_THEVO|S-ADENOSYLMETHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 30 HPDSVADGIA 39


>sp|METK_PYRAB|S-ADENOSYLMETHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 30 HPDSIADGIA 39


>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 33 HPDSIADGIA 42


>sp|METK_THEGJ|S-ADENOSYLMETHIONINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 33 HPDSIADGIA 42


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 30 HPDSIADGIA 39


>sp|METK_PICTO|S-ADENOSYLMETHIONINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 34 HPDSVADGIA 43


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 30 HPDSVADGIA 39


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 30 HPDSIADGIA 39


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HPDTRASGLA 10
HPD+ + GLA
Sbjct: 30 HPDSISDGLA 39


>sp|METK_THEKO|S-ADENOSYLMETHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 33 HPDSIADGIA 42


>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 30 HPDSIADGIA 39


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HPDTRASGLA 10
HPD+ + GLA
Sbjct: 30 HPDSISDGLA 39


>sp|METK_METHJ|S-ADENOSYLMETHIONINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 30 HPDSIADGIA 39


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HPDTRASGLA 10
HPD+ + GLA
Sbjct: 30 HPDSISDGLA 39


>sp|METK_METTP|S-ADENOSYLMETHIONINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 30 HPDSVADGIA 39


>sp|METK_METKA|S-ADENOSYLMETHIONINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 HPDTRASGLA 10
HPD+ A G+A
Sbjct: 30 HPDSLADGIA 39


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HPDTRASGLA 10
HP T A+GLA
Sbjct: 299 HPVTMAAGLA 308


>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HPDTRASGLA 10
HPD+ + GLA
Sbjct: 30 HPDSISDGLA 39


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 1 HPDTRASGLA 10
HP T A+GLA
Sbjct: 301 HPVTMAAGLA 310


>sp|METK_METST|S-ADENOSYLMETHIONINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 HPDTRASGLA 10
HPD+ + G+A
Sbjct: 29 HPDSISDGIA 38


>sp|GSA_AERPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Aeropyrum pernix (strain ATCC 700893

Query: 1 HPDTRASGLA 10
HP T A+GLA
Sbjct: 302 HPITMAAGLA 311


>sp|THII_ARCFU|PROBABLE tRNA sulfurtransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HPDTRA 6
HP+TRA
Sbjct: 340 HPETRA 345


>sp|KHSE_PICTO|HOMOSERINE kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 HPDTRASGL 9
HPD +SG+
Sbjct: 130 HPDNVSSGI 138


>sp|METK_METTM|S-ADENOSYLMETHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 HPDTRASGLA 10
HPD+ + G+A
Sbjct: 29 HPDSISDGIA 38


>sp|METK_METTH|S-ADENOSYLMETHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 HPDTRASGLA 10
HPD+ + G+A
Sbjct: 29 HPDSISDGIA 38


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HPDTRASGLA 10
HPD A G+A
Sbjct: 27 HPDYIADGVA 36


>sp|METK_METVS|S-ADENOSYLMETHIONINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 HPDTRASGLA 10
HPD+ G+A
Sbjct: 29 HPDSICDGIA 38


>sp|METK_METMP|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HPDTRASGLA 10
HPD+ G+A
Sbjct: 29 HPDSICDGIA 38


>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 HPDTRASGLA 10
HPD+ G+A
Sbjct: 29 HPDSICDGIA 38


>sp|METK_METM5|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 HPDTRASGLA 10
HPD+ G+A
Sbjct: 29 HPDSICDGIA 38


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HPDTRASGLA 10
HPD+ G+A
Sbjct: 29 HPDSICDGIA 38


>sp|METK_META3|S-ADENOSYLMETHIONINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HPDTRASGLA 10
HPD+ G+A
Sbjct: 29 HPDSICDGIA 38


>sp|METK_METM6|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 HPDTRASGLA 10
HPD+ G+A
Sbjct: 29 HPDSICDGIA 38


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 HPDTRASGLA 10
HPD+ G+A
Sbjct: 29 HPDSICDGVA 38


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HPDTRASGLA 10
HPDT G+A
Sbjct: 31 HPDTICDGIA 40


>sp|METK_NATPD|S-ADENOSYLMETHIONINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HPDTRASGLA 10
HPD+ G+A
Sbjct: 31 HPDSLCDGIA 40


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 HPDTRASGL 9
HP R SGL
Sbjct: 46 HPHIRDSGL 54


>sp|THI4_HALVD|THIAMINE thiazole synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 HPDTRASGLA 10
HP ASG+A
Sbjct: 249 HPGVVASGMA 258


>sp|TRUD_HALSA|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain

Query: 1 HPDTRASGLA 10
HP RA G+A
Sbjct: 5 HPIERAVGMA 14


>sp|TRUD_HALS3|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain

Query: 1 HPDTRASGLA 10
HP RA G+A
Sbjct: 5 HPIERAVGMA 14


>sp|METK_HALSA|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HPDTRASGLA 10
HPD+ G+A
Sbjct: 31 HPDSICDGIA 40


>sp|METK_HALS3|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 HPDTRASGLA 10
HPD+ G+A
Sbjct: 31 HPDSICDGIA 40


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HPDTRASGL 9
HP T A+GL
Sbjct: 299 HPVTMAAGL 307


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HPDTRASGL 9
HP T A+GL
Sbjct: 300 HPVTMAAGL 308




25|SequenceR|130|121|LFDCLHPDTR

>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 3 DCLHPDTR 10
+C HPDTR
Sbjct: 965 NCFHPDTR 972


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 4 CLHPDT 9
CLHPDT
Sbjct: 315 CLHPDT 320


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 4 CLHPDT 9
CLHPDT
Sbjct: 72 CLHPDT 77


>sp|NADM_AERPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 DCLHPDTR 10
DCLHP R
Sbjct: 146 DCLHPQVR 153


>sp|DNLI_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 FDCLHPD 8
FDCLH D
Sbjct: 385 FDCLHAD 391


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 CLHPDT 9
C+HPDT
Sbjct: 332 CMHPDT 337


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LFDCLHPD 8
+FDCLH D
Sbjct: 402 VFDCLHID 409


>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FDCLHPD 8
FDCLH D
Sbjct: 343 FDCLHVD 349


>sp|Y3181_METBF|UPF0210 protein Mbar_A3181|Methanosarcina barkeri (strain Fusaro /

Query: 1 LFDCLHPD 8
L DC HPD
Sbjct: 31 LRDCSHPD 38


>sp|Y1691_METAC|UPF0210 protein MA_1691|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LFDCLHPD 8
L DC HPD
Sbjct: 42 LRDCSHPD 49


>sp|Y081_METMA|UPF0210 protein MM_0081|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LFDCLHPD 8
L DC HPD
Sbjct: 31 LRDCSHPD 38


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DCLHPD 8
DC HPD
Sbjct: 42 DCTHPD 47


>sp|DNLI_METKA|DNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 LFDCLHPD 8
LFDCL+ D
Sbjct: 340 LFDCLYVD 347


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DCLHPDTR 10
+C HP+T+
Sbjct: 966 NCFHPETK 973


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FDCLH 6
FDCLH
Sbjct: 344 FDCLH 348


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 FDCLH 6
FDCLH
Sbjct: 344 FDCLH 348


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FDCLH 6
FDCLH
Sbjct: 344 FDCLH 348


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 2 FDCLH 6
FDCLH
Sbjct: 370 FDCLH 374


>sp|GAD_PICTO|D-GLUCONATE/D-GALACTONATE dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 3 DCLHPD 8
DCL PD
Sbjct: 136 DCLEPD 141


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FDCLHPDTR 10
FD + PD+R
Sbjct: 215 FDTIMPDSR 223


>sp|RIBL_METKA|FAD synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 LFDCLHP 7
+FD LHP
Sbjct: 10 VFDILHP 16


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LFDCLHPD 8
++D +HPD
Sbjct: 204 MYDKIHPD 211


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 1 LFDCLHPDTR 10
+F CL+P R
Sbjct: 504 IFRCLNPTCR 513


>sp|RIBL_PICTO|FAD synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 LFDCLHP 7
+FD LHP
Sbjct: 8 VFDILHP 14


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CLHPD 8
C HPD
Sbjct: 261 CFHPD 265


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 FDCLHPDTR 10
FD LHP +
Sbjct: 194 FDLLHPQYK 202


>sp|RIBL_METLZ|FAD synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDILHP 15


>sp|RIBL_METIM|FAD synthase|Methanocaldococcus infernus (strain DSM 11812

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDILHP 15


>sp|RIBL_METS3|FAD synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDLLHP 15


>sp|RIBL_METSF|FAD synthase|Methanocaldococcus sp. (strain FS406-22)

Query: 2 FDCLHP 7
FD LHP
Sbjct: 13 FDILHP 18


>sp|RIBL_METAR|FAD synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 FDCLHP 7
FD LHP
Sbjct: 11 FDILHP 16


>sp|RIBL_META3|FAD synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FDCLHP 7
FD LHP
Sbjct: 17 FDLLHP 22


>sp|RIBL_METRM|FAD synthase|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 FDCLHP 7
FD LHP
Sbjct: 9 FDILHP 14


>sp|RIBL_METFA|FAD synthase|Methanocaldococcus fervens (strain DSM 4213

Query: 2 FDCLHP 7
FD LHP
Sbjct: 12 FDILHP 17


>sp|RIBL_METVS|FAD synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FDCLHP 7
FD LHP
Sbjct: 13 FDLLHP 18


>sp|RIBL_METJA|FAD synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FDCLHP 7
FD LHP
Sbjct: 11 FDILHP 16


>sp|RS4_KORCO|SMALL ribosomal subunit protein uS4|Korarchaeum cryptofilum (strain OPF8)

Query: 3 DCLHP 7
+CLHP
Sbjct: 152 ECLHP 156


>sp|RIBL_METBU|FAD synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDLLHP 15


>sp|RIBL_METEZ|FAD synthase|Methanohalobium evestigatum (strain ATCC BAA-1072

Query: 2 FDCLHP 7
FD LHP
Sbjct: 21 FDLLHP 26


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 3 DCLHPDT 9
+C HP+T
Sbjct: 925 NCFHPET 931


>sp|RIBL_METV3|FAD synthase|Methanococcus voltae (strain ATCC BAA-1334

Query: 2 FDCLHP 7
FD LHP
Sbjct: 35 FDLLHP 40


>sp|RIBL_METBF|FAD synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDLLHP 15


>sp|RIBL_METB6|FAD synthase|Methanoregula boonei (strain DSM 21154

Query: 2 FDCLHP 7
FD LHP
Sbjct: 12 FDILHP 17


>sp|RIBL_ACIB4|FAD synthase|Aciduliprofundum boonei (strain DSM 19572

Query: 1 LFDCLHP 7
+FD LHP
Sbjct: 9 VFDILHP 15


>sp|RIBL_METM5|FAD synthase|Methanococcus maripaludis (strain C5 /

Query: 2 FDCLHP 7
FD LHP
Sbjct: 12 FDLLHP 17


>sp|RIBL_METMP|FAD synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FDCLHP 7
FD LHP
Sbjct: 12 FDLLHP 17


>sp|RIBL_METMA|FAD synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FDCLHP 7
FD LHP
Sbjct: 22 FDILHP 27


>sp|RIBL_METVM|FAD synthase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 2 FDCLHP 7
FD LHP
Sbjct: 17 FDILHP 22


>sp|RIBL_METHJ|FAD synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDILHP 15


>sp|RIBL_METM7|FAD synthase|Methanococcus maripaludis (strain C7 /

Query: 2 FDCLHP 7
FD LHP
Sbjct: 12 FDLLHP 17


>sp|RIBL_METP4|FAD synthase|Methanolacinia petrolearia (strain DSM 11571

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDILHP 15


>sp|AROC_HALWD|CHORISMATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 CLHPDT 9
C HP+T
Sbjct: 183 CAHPET 188


>sp|RIBL_METTP|FAD synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 FDCLHP 7
FD LHP
Sbjct: 14 FDILHP 19


>sp|RIBL_METM6|FAD synthase|Methanococcus maripaludis (strain C6 /

Query: 2 FDCLHP 7
FD LHP
Sbjct: 12 FDLLHP 17


>sp|RIBL_METMS|FAD synthase|Methanohalophilus mahii (strain ATCC 35705

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDILHP 15


>sp|RIBL_METPE|FAD synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDLLHP 15


>sp|RIBL_HALMD|FAD synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 FDCLHP 7
FD LHP
Sbjct: 12 FDILHP 17


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDILHP 15


>sp|RIBL_METPS|FAD synthase|Methanocella paludicola (strain DSM 17711

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDILHP 15


>sp|RIBL_HALVD|FAD synthase|Haloferax volcanii (strain ATCC 29605

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDILHP 15


>sp|RIBL_METAC|FAD synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FDCLHP 7
FD LHP
Sbjct: 22 FDILHP 27


>sp|RIBL_HALUD|FAD synthase|Halorhabdus utahensis (strain DSM 12940

Query: 2 FDCLHP 7
FD LHP
Sbjct: 10 FDLLHP 15




26|SequenceR|135|126|LFHTELFDCL

>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 1 LFHTELFDCL 10
+FH EL +CL
Sbjct: 167 IFHGELEECL 176


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LFHTELFDCL 10
L HTE DCL
Sbjct: 371 LAHTERSDCL 380


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LFHTELFDCL 10
L HTE DCL
Sbjct: 353 LSHTERSDCL 362


>sp|Y1577_ARCFU|UNCHARACTERIZED protein AF_1577|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FHTELFDC 9
FHT++F C
Sbjct: 63 FHTDIFIC 70


>sp|HEM1_METTM|GLUTAMYL-TRNA reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 TELFDC 9
+ELFDC
Sbjct: 390 SELFDC 395


>sp|Y776_NATPD|UPF0213 protein NP_0776A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LFHTELFD 8
L HTE FD
Sbjct: 49 LVHTERFD 56


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 FHTELFD 8
FHTEL +
Sbjct: 133 FHTELLE 139


>sp|THIM_PYRHO|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FHTELFDCL 10
FH +L+D L
Sbjct: 238 FHVKLYDWL 246


>sp|THIM_PYRFU|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FHTELFDCL 10
FH +L+D L
Sbjct: 238 FHAKLYDWL 246


>sp|THIM_PYRAB|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 FHTELFDCL 10
FH +L+D L
Sbjct: 238 FHVKLYDWL 246


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 2 FHTELFDCL 10
F TEL CL
Sbjct: 263 FETELAGCL 271


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LFHTELFDCL 10
L H E DCL
Sbjct: 379 LSHVERSDCL 388




27|SequenceR|140|131|KVEEDLFHTE

>sp|RS15_IGNH4|SMALL ribosomal subunit protein uS15|Ignicoccus hospitalis (strain

Query: 2 VEEDLFH 8
+ EDLFH
Sbjct: 82 IPEDLFH 88


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVEEDLFHT 9
K+EED+F T
Sbjct: 98 KLEEDVFGT 106


>sp|OTC_METHJ|ORNITHINE carbamoyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VEEDLFHTE 10
+EE LF TE
Sbjct: 141 IEERLFRTE 149


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KVEEDLFHT 9
K+E+DLF +
Sbjct: 59 KIEKDLFKS 67




28|SequenceR|145|136|MKKILKVEED

>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 MKKILKVEE 9
MKK++ VEE
Sbjct: 295 MKKVIVVEE 303


>sp|Y1212_ARCFU|UNCHARACTERIZED protein AF_1212|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KILKVEED 10
KIL VEED
Sbjct: 61 KILGVEED 68


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MKKILKVEED 10
+K+ILK ED
Sbjct: 219 LKRILKFNED 228


>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 MKKILKVEE 9
+ KILKV+E
Sbjct: 210 ISKILKVDE 218


>sp|RL3_METS5|LARGE ribosomal subunit protein uL3|Metallosphaera sedula (strain ATCC

Query: 2 KKILKVEED 10
K+ILK+ +D
Sbjct: 270 KRILKISDD 278


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MKKILKVEED 10
++K +KVEED
Sbjct: 113 LEKYIKVEED 122


>sp|NPD_THEKO|NAD-DEPENDENT protein deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 MKKILKVEED 10
M+KILK E +
Sbjct: 68 MRKILKAEPN 77




29|SequenceR|150|141|TLHDGMKKIL

>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LHDGMKK 8
LHDG+KK
Sbjct: 291 LHDGLKK 297


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LHDGMKKIL 10
LHD +KK+L
Sbjct: 758 LHDVLKKVL 766


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 TLHDGMKKIL 10
T+ GMKK+L
Sbjct: 520 TIDTGMKKVL 529


>sp|MRE11_SACS2|DNA double-strand break repair protein|Saccharolobus solfataricus

Query: 2 LHDGMKKIL 10
LH G+K+IL
Sbjct: 155 LHQGVKQIL 163


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 DGMKKIL 10
DG+KK+L
Sbjct: 261 DGLKKVL 267


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 HDGMK 7
HDGMK
Sbjct: 84 HDGMK 88


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TLHDGMKKIL 10
+++DG KKI+
Sbjct: 304 SINDGRKKII 313


>sp|CBIZ_HALSA|ADENOSYLCOBINAMIDE amidohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TLHDGM 6
TLHDG+
Sbjct: 5 TLHDGV 10


>sp|MRE11_SULTO|DNA double-strand break repair protein|Sulfurisphaera tokodaii (strain

Query: 2 LHDGMKKIL 10
LH G+K++L
Sbjct: 158 LHQGLKEVL 166


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LHDGMKKIL 10
+H G++KIL
Sbjct: 46 IHKGIEKIL 54


>sp|IPK_HALVD|ISOPENTENYL phosphate kinase|Haloferax volcanii (strain ATCC 29605

Query: 2 LHDGMKKI 9
+HD MK++
Sbjct: 77 IHDAMKRL 84


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LHDGMKKI 9
+HD MK++
Sbjct: 863 IHDNMKEV 870


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TLHDGMKKIL 10
TL DG K+L
Sbjct: 315 TLEDGKAKLL 324


>sp|COAD_PYRAE|PHOSPHOPANTETHEINE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TLHDGMKKIL 10
TLH G K+L
Sbjct: 16 TLHSGHVKLL 25


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LHDGMKKI 9
+HDG KK+
Sbjct: 454 VHDGDKKV 461


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LHDGMKKI 9
+HDG KK+
Sbjct: 454 VHDGDKKV 461


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LHDGMKKI 9
+HDG KK+
Sbjct: 454 VHDGDKKV 461


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LHDGMKKI 9
+HDG KK+
Sbjct: 454 VHDGDKKV 461




30|SequenceR|155|146|LRHLNTLHDG

>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 RHLNTLHDG 10
RHL T+HDG
Sbjct: 430 RHLATIHDG 438


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 1 LRHLNTL 7
LRHLNT+
Sbjct: 83 LRHLNTI 89


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 4 LNTLHD 9
LNTLHD
Sbjct: 627 LNTLHD 632


>sp|Y2347_METMJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanoculleus

Query: 3 HLNTLHDG 10
HL+TL DG
Sbjct: 288 HLHTLEDG 295


>sp|DMD_SACS2|DIPHOSPHOMEVALONATE decarboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LRHLNTLH 8
+RH N++H
Sbjct: 239 MRHSNSMH 246


>sp|PDXS_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Picrophilus torridus (strain

Query: 1 LRHLNTLHDG 10
+RH+ ++DG
Sbjct: 170 MRHIRKVNDG 179


>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 1 LRHLNTLHDG 10
+RH +LH G
Sbjct: 295 IRHPGSLHGG 304




31|SequenceR|160|151|AEPGGLRHLN

>sp|TOP6A_HYPBU|TYPE 2 DNA topoisomerase 6|Hyperthermus butylicus (strain DSM 5456

Query: 2 EPGGLRH 8
EPGG RH
Sbjct: 116 EPGGRRH 122


>sp|VORB_PYRHO|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus horikoshii (strain ATCC

Query: 3 PGGLRHL 9
PGG RHL
Sbjct: 163 PGGKRHL 169


>sp|PGP_METTH|PHOSPHOGLYCOLATE phosphatase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AEPGGLRHLN 10
AE GG+ H+N
Sbjct: 63 AENGGVLHIN 72


>sp|LIVH_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 4 GGLRHLN 10
GGLRH++
Sbjct: 243 GGLRHIS 249


>sp|THIE_METM6|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain C6 /

Query: 4 GGLRHLN 10
GG+ HLN
Sbjct: 161 GGINHLN 167


>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 3 PGGLRHLN 10
PG LRH++
Sbjct: 19 PGPLRHVS 26


>sp|VORB_PYRFU|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PGGLRHL 9
PGG RH
Sbjct: 163 PGGRRHF 169


>sp|CRYD_NATPD|CRYPTOCHROME DASH|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EPGGLRHLN 10
+PGG+R N
Sbjct: 305 KPGGIRERN 313


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 AEPGGLR 7
+EPGG R
Sbjct: 348 SEPGGFR 354


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 3 PGGLRHL 9
PGG RH
Sbjct: 163 PGGKRHF 169


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 2 EPGGLRHLN 10
+PG + HLN
Sbjct: 224 QPGEILHLN 232




32|SequenceR|165|156|YEGLGAEPGG

>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YEGLGAEPGG 10
YEG+G P G
Sbjct: 177 YEGIGGLPAG 186


>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 EGLGAEPG 9
EGLG+ PG
Sbjct: 150 EGLGSMPG 157


>sp|RLME_METST|RIBOSOMAL RNA large subunit methyltransferase|Methanosphaera stadtmanae

Query: 4 LGAEPGG 10
LGA PGG
Sbjct: 49 LGAAPGG 55


>sp|RLME_ARCFU|RIBOSOMAL RNA large subunit methyltransferase|Archaeoglobus fulgidus

Query: 4 LGAEPGG 10
LGA PGG
Sbjct: 44 LGATPGG 50


>sp|RLME_METTH|RIBOSOMAL RNA large subunit methyltransferase|Methanothermobacter

Query: 4 LGAEPGG 10
LGA PGG
Sbjct: 50 LGAAPGG 56


>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 1 YEGLGAEPG 9
+EGL EPG
Sbjct: 355 FEGLKREPG 363


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 2 EGLGAEPG 9
+GLGA PG
Sbjct: 384 KGLGASPG 391


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 2 EGLGAEPG 9
+GLGA PG
Sbjct: 338 KGLGASPG 345


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 EGLGAEPG 9
+GLGA PG
Sbjct: 381 KGLGASPG 388


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EGLGAEPG 9
+GLGA PG
Sbjct: 382 KGLGASPG 389


>sp|RLME_METBU|RIBOSOMAL RNA large subunit methyltransferase|Methanococcoides burtonii

Query: 4 LGAEPGG 10
LGA PGG
Sbjct: 45 LGAAPGG 51


>sp|GCH3_PYRAE|GTP cyclohydrolase III|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YEGLGAEPG 9
YE GA PG
Sbjct: 98 YENCGATPG 106


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 EGLGAEPG 9
+G+GA PG
Sbjct: 352 KGIGASPG 359


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 2 EGLGAEPG 9
+GLGA PG
Sbjct: 364 KGLGASPG 371


>sp|RLME_METS3|RIBOSOMAL RNA large subunit methyltransferase|Methanobrevibacter smithii

Query: 4 LGAEPGG 10
LGA PGG
Sbjct: 50 LGAAPGG 56


>sp|RLME_METAR|RIBOSOMAL RNA large subunit methyltransferase|Methanocella arvoryzae

Query: 4 LGAEPGG 10
LGA PGG
Sbjct: 45 LGAAPGG 51


>sp|Y482_METJA|UNCHARACTERIZED protein MJ0482|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LGAEPG 9
+GAEPG
Sbjct: 182 IGAEPG 187


>sp|Y2143_SULTO|UPF0284 protein STK_21430|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LGAEPGG 10
LG EPGG
Sbjct: 110 LGGEPGG 116


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EGLGAEPG 9
EG+G EP
Sbjct: 332 EGMGMEPA 339


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 1 YEGLGA--EPG 9
Y+GLG EPG
Sbjct: 369 YDGLGVEKEPG 379


>sp|RPO5_METBU|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcoides burtonii (strain DSM

Query: 4 LGAEPG 9
+GAEPG
Sbjct: 50 IGAEPG 55


>sp|RLME_METMA|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina mazei (strain

Query: 4 LGAEPGG 10
LGA PGG
Sbjct: 45 LGAAPGG 51


>sp|Y1534_PYRCJ|UPF0284 protein Pcal_1534|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YEGLGAEPGG 10
Y LG EPGG
Sbjct: 93 YVDLGGEPGG 102


>sp|RLME_METBF|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina barkeri

Query: 4 LGAEPGG 10
LGA PGG
Sbjct: 45 LGAAPGG 51


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 1 YEGLGAE--PG 9
Y+GLG E PG
Sbjct: 362 YDGLGVEKKPG 372


>sp|RLME_HALWD|RIBOSOMAL RNA large subunit methyltransferase|Haloquadratum walsbyi (strain

Query: 4 LGAEPGG 10
LGA PGG
Sbjct: 43 LGAAPGG 49


>sp|Y020_SULAC|UPF0284 protein Saci_0020|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LGAEPGG 10
+G EPGG
Sbjct: 109 VGGEPGG 115


>sp|RLME_METAC|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina acetivorans

Query: 4 LGAEPGG 10
LGA PGG
Sbjct: 45 LGAAPGG 51


>sp|RLME_METTP|RIBOSOMAL RNA large subunit methyltransferase|Methanothrix thermoacetophila

Query: 4 LGAEPGG 10
LGA PGG
Sbjct: 45 LGAAPGG 51


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 5 GAEPGG 10
G+EPGG
Sbjct: 536 GSEPGG 541


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GLGAEPGG 10
GLG E GG
Sbjct: 198 GLGGESGG 205


>sp|ILVC3_SACS2|PUTATIVE ketol-acid reductoisomerase 3|Saccharolobus solfataricus (strain

Query: 2 EGLGAEPGG 10
+G+GA PGG
Sbjct: 169 KGIGAIPGG 177


>sp|RNP3_NATPD|RIBONUCLEASE P protein component 3|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YEGLGAEPGG 10
YEG+ A P G
Sbjct: 2 YEGVHAHPDG 11


>sp|ILVC2_SACS2|PUTATIVE ketol-acid reductoisomerase 2|Saccharolobus solfataricus (strain

Query: 2 EGLGAEPGG 10
+G+GA PGG
Sbjct: 169 KGIGAIPGG 177


>sp|RPO5_NITMS|DNA-DIRECTED RNA polymerase subunit Rpo5|Nitrosopumilus maritimus (strain

Query: 3 GLGAEPG 9
GLG +PG
Sbjct: 53 GLGVKPG 59


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EGLGAEPGG 10
EG+G EP
Sbjct: 334 EGIGVEPAS 342




33|SequenceR|175|161|DHKLTLREFLYEGLG

>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 6 LREFLYEGLG 15
LR+FL EG+G
Sbjct: 392 LRDFLVEGVG 401


>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 DHKLTLREFLYEGLG 15
+H L L F +EG+G
Sbjct: 271 EHNLILELFTHEGVG 285


>sp|RL10E_HALMA|LARGE ribosomal subunit protein uL16|Haloarcula marismortui (strain

Query: 1 DHKLTLREFLYEGL 14
D+K+TLR+F ++ L
Sbjct: 85 DYKMTLRKFPHQVL 98


>sp|Y597_ARCFU|UPF0175 protein AF_0597|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LTLREFLYE 12
L++REFLYE
Sbjct: 53 LSIREFLYE 61


>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DHKLTLREFLYEG 13
DH +R ++EG
Sbjct: 328 DHDFNVRRVIFEG 340


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 LTLREFLYEGL 14
L LRE++YE +
Sbjct: 140 LQLREWIYENM 150


>sp|SUI1_METKA|PROTEIN translation factor SUI1 homolog|Methanopyrus kandleri (strain

Query: 1 DHKLTLREFLYEGLG 15
DH+ +REFL + G
Sbjct: 83 DHRNKVREFLIKKEG 97


>sp|HIS8_METST|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DHKLTLREFLYEGL 14
+ +T RE+LYE +
Sbjct: 276 EKAITEREYLYESV 289


>sp|Y2319_HALLT|UPF0179 protein Hlac_2319|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 TLREFLYEG 13
T REF+Y+G
Sbjct: 14 TGREFVYQG 22


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 DHKLTLREFLYEGL 14
++ + RE+LY GL
Sbjct: 283 EYSIKSREYLYSGL 296


>sp|PORC_METJA|PYRUVATE synthase subunit PorC|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DHKLTLREFLYE 12
D K+TLR +YE
Sbjct: 55 DKKITLRCQIYE 66


>sp|TRPB1_AERPE|TRYPTOPHAN synthase beta chain 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 KLTLREFLYEGL 14
KLT E+ Y+GL
Sbjct: 294 KLTRGEYRYDGL 305


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DHKLTLREFLYE 12
+H LT+ E +YE
Sbjct: 665 EHALTISEKIYE 676


>sp|HIS8_SACS2|HISTIDINOL-PHOSPHATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 7 REFLYEGL 14
RE LY+GL
Sbjct: 300 REILYQGL 307


>sp|RL10E_HALLT|LARGE ribosomal subunit protein uL16|Halorubrum lacusprofundi (strain

Query: 1 DHKLTLREFLYE 12
++K+TLR+F ++
Sbjct: 84 NYKMTLRKFPHQ 95


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DHKLTLREF 9
+H+LTLR+
Sbjct: 38 EHRLTLRDL 46


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 DHKLTLREFLYEGL 14
D+KLTL +L L
Sbjct: 38 DYKLTLERYLRPAL 51


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 DHKLTLREFLYEGL 14
D+KLTL +L L
Sbjct: 38 DYKLTLERYLRPAL 51


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 DHKLTLREFLYEGL 14
D+KLTL +L L
Sbjct: 38 DYKLTLERYLRPAL 51


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 DHKLTLREFLYEGL 14
D+KLTL +L L
Sbjct: 38 DYKLTLERYLRPAL 51


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 DHKLTLREFLYEGL 14
D+KLTL +L L
Sbjct: 38 DYKLTLERYLRPAL 51


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 DHKLTLREFLYEGL 14
D+KLTL +L L
Sbjct: 38 DYKLTLERYLRPAL 51


>sp|RPO1C_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Aeropyrum pernix (strain ATCC 700893

Query: 3 KLTLREFLYEGL 14
++TLR F Y G+
Sbjct: 77 QMTLRTFHYAGI 88


>sp|RL10E_NATPD|LARGE ribosomal subunit protein uL16|Natronomonas pharaonis (strain

Query: 1 DHKLTLREFLYE 12
D+K+ LR+F ++
Sbjct: 85 DYKMILRKFPHQ 96


>sp|UPPP_METS3|UNDECAPRENYL-DIPHOSPHATASE smithii (strain ATCC 35061

Query: 4 LTLREFLYEGLG 15
L+L+E ++ GLG
Sbjct: 153 LSLKESIFMGLG 164


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 8 EFLYEGLG 15
EF+Y+GL
Sbjct: 176 EFIYDGLA 183


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 7 REFLYEGL 14
++FLY GL
Sbjct: 40 KQFLYNGL 47


>sp|Y949_METPE|UPF0179 protein Mpal_0949|Methanosphaerula palustris (strain ATCC

Query: 8 EFLYEG 13
EF+YEG
Sbjct: 21 EFIYEG 26


>sp|RIFK_THEPD|RIBOFLAVIN kinase|Thermofilum pendens (strain DSM 2475

Query: 4 LTLREFLYEGLG 15
LTLR ++ GLG
Sbjct: 93 LTLRGYVVPGLG 104


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 7 REFLYEGL 14
++FLY GL
Sbjct: 42 KQFLYNGL 49


>sp|ARGB_METHJ|ACETYLGLUTAMATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HKLTLREFLYEGLG 15
H L + F EG+G
Sbjct: 271 HNLIMELFTAEGVG 284


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 4 LTLREFLY 11
LTLR+F Y
Sbjct: 369 LTLRDFRY 376


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 6 LREFLYEG 13
LR F+Y+G
Sbjct: 564 LRRFIYDG 571


>sp|MTNA_METJA|PUTATIVE methylthioribose-1-phosphate isomerase|Methanocaldococcus

Query: 3 KLTLREFLYEGL 14
KLT E YEG+
Sbjct: 185 KLTAFELNYEGI 196


>sp|NIFH_METMJ|NITROGENASE iron protein|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DHKLTLREFLYEGL 14
D K+T+ + +Y G
Sbjct: 65 DEKITVDDVVYRGF 78


>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 7 REFLYEGL 14
++FLY GL
Sbjct: 42 KQFLYNGL 49


>sp|ARGB_METPE|ACETYLGLUTAMATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DHKLTLREFLYEGLG 15
+H L L F +G+G
Sbjct: 270 EHNLLLELFTRDGVG 284


>sp|ARGB_METJA|ACETYLGLUTAMATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HKLTLREFLYEGLG 15
H L L F EG+G
Sbjct: 281 HALLLEIFTEEGIG 294


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DHKLTLREFLYE 12
+ K+ L+E L+E
Sbjct: 299 ERKMELKEILFE 310


>sp|ARGB_METTH|ACETYLGLUTAMATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DHKLTLREFLYEGLG 15
+H L L F +G+G
Sbjct: 274 EHSLLLEIFTKKGIG 288


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 8 EFLYEGLG 15
EFL +GLG
Sbjct: 172 EFLTDGLG 179


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 8 EFLYEGLG 15
+FL EGLG
Sbjct: 172 DFLTEGLG 179


>sp|TRUA_HALSA|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 2 HKLTLREFLYEGL 14
H L L Y+GL
Sbjct: 218 HPLVLHAVAYDGL 230


>sp|TRUA_HALS3|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC 29341

Query: 2 HKLTLREFLYEGL 14
H L L Y+GL
Sbjct: 218 HPLVLHAVAYDGL 230


>sp|Y1374_SULTO|DNA-BINDING protein STK_13740|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DHKLTLRE 8
D+K+T+RE
Sbjct: 104 DYKITIRE 111




34|SequenceR|175|166|DHKLTLREFL

>sp|RL10E_HALMA|LARGE ribosomal subunit protein uL16|Haloarcula marismortui (strain

Query: 1 DHKLTLREF 9
D+K+TLR+F
Sbjct: 85 DYKMTLRKF 93


>sp|SUI1_METKA|PROTEIN translation factor SUI1 homolog|Methanopyrus kandleri (strain

Query: 1 DHKLTLREFL 10
DH+ +REFL
Sbjct: 83 DHRNKVREFL 92


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DHKLTLREF 9
+H+LTLR+
Sbjct: 38 EHRLTLRDL 46


>sp|RL10E_HALLT|LARGE ribosomal subunit protein uL16|Halorubrum lacusprofundi (strain

Query: 1 DHKLTLREF 9
++K+TLR+F
Sbjct: 84 NYKMTLRKF 92


>sp|RL10E_NATPD|LARGE ribosomal subunit protein uL16|Natronomonas pharaonis (strain

Query: 1 DHKLTLREF 9
D+K+ LR+F
Sbjct: 85 DYKMILRKF 93


>sp|PANB_METS5|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 HKLTLREFL 10
+LT+R+FL
Sbjct: 2 QRLTIRDFL 10


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 DHKLTLREFL 10
D+KLTL +L
Sbjct: 38 DYKLTLERYL 47


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 DHKLTLREFL 10
D+KLTL +L
Sbjct: 38 DYKLTLERYL 47


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 DHKLTLREFL 10
D+KLTL +L
Sbjct: 38 DYKLTLERYL 47


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 DHKLTLREFL 10
D+KLTL +L
Sbjct: 38 DYKLTLERYL 47


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 DHKLTLREFL 10
D+KLTL +L
Sbjct: 38 DYKLTLERYL 47


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 DHKLTLREFL 10
D+KLTL +L
Sbjct: 38 DYKLTLERYL 47


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 DHKLTLREFL 10
DH T+RE L
Sbjct: 538 DHTTTVRETL 547


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HKLTLREFL 10
HK +REFL
Sbjct: 102 HKKFVREFL 110


>sp|PANB_SULTO|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 3 KLTLREFL 10
K+T+R+FL
Sbjct: 3 KVTIRDFL 10


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 HKLTLREFL 10
HK +REFL
Sbjct: 102 HKKFVREFL 110




THE END