1|SequenceR|10|1|FGGVEALPAM
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate
Query: 1 FGGVEALPA 9
FGG++ LPA
Sbjct: 27 FGGLKRLPA 35
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 FGGVEALPA 9
FGG++ LPA
Sbjct: 27 FGGLKRLPA 35
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 FGGVEALP 8
FGG+ LP
Sbjct: 1112 FGGIATLP 1119
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 FGGVEALP 8
FGG+ LP
Sbjct: 1111 FGGIATLP 1118
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 FGGVEALPAM 10
FGGV +P M
Sbjct: 728 FGGVGFIPKM 737
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 FGGVEALPAM 10
F G++ LP +
Sbjct: 940 FNGIKVLPPI 949
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 FGGVEALPAM 10
F G++ LP +
Sbjct: 940 FNGIKVLPPI 949
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 FGGVEALPAM 10
F G++ LP +
Sbjct: 944 FNGIKVLPPI 953
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 FGGVEALPA 9
GG++ LPA
Sbjct: 27 LGGLKRLPA 35
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 FGGVEALPAM 10
FG EA PA+
Sbjct: 2417 FGDGEAKPAL 2426
2|SequenceR|15|6|ELGGLFGGVE
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 1 ELGGLFGGVE 10
+LGGL+ VE
Sbjct: 682 DLGGLYEAVE 691
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 ELGGLFGGVE 10
+LGGL+ VE
Sbjct: 682 DLGGLYEAVE 691
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 ELGGLFGGVE 10
+LGGL+ VE
Sbjct: 682 DLGGLYEAVE 691
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 ELGGLFGGVE 10
+LGGL+ VE
Sbjct: 682 DLGGLYEAVE 691
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 ELGGLFGGVE 10
+LGGL+ VE
Sbjct: 682 DLGGLYEAVE 691
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 ELGGLFGGVE 10
+LGGL+ VE
Sbjct: 675 DLGGLYEAVE 684
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 675 DLGGLYEAIE 684
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 678 DLGGLYEAIE 687
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 659 DLGGLYEAIE 668
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYEAIE 691
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYESIE 691
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYESIE 691
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYESIE 691
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 ELGGLFGGVE 10
+LGGL+ +E
Sbjct: 682 DLGGLYESIE 691
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 LGGLFGGV 9
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252
Query: 4 GLFGGV 9
GLFGG+
Sbjct: 729 GLFGGL 734
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 LGGLFGGV 9
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252
Query: 4 GLFGGV 9
GLFGG+
Sbjct: 729 GLFGGL 734
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 LGGLFGGV 9
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252
Query: 4 GLFGGV 9
GLFGG+
Sbjct: 729 GLFGGL 734
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 LGGLFGGV 9
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252
Query: 4 GLFGGV 9
GLFGG+
Sbjct: 729 GLFGGL 734
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 LGGLFGGV 9
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252
Query: 4 GLFGGV 9
GLFGG+
Sbjct: 729 GLFGGL 734
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 LGGLFGGV 9
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252
Query: 4 GLFGGV 9
GLFGG+
Sbjct: 729 GLFGGL 734
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 LGGLFGGV 9
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252
Query: 4 GLFGGV 9
GLFGG+
Sbjct: 729 GLFGGL 734
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 LGGLFGGV 9
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252
Query: 4 GLFGGV 9
GLFGG+
Sbjct: 729 GLFGGL 734
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 LGGLFGGV 9
LGG GGV
Sbjct: 140 LGGPLGGV 147
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ELGGLFG 7
ELG +FG
Sbjct: 468 ELGAVFG 474
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ELGGLFG 7
ELG +FG
Sbjct: 467 ELGAVFG 473
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 LGGLFGGV 9
LGG+ GG+
Sbjct: 1245 LGGVMGGL 1252
Query: 4 GLFGGV 9
GLFGG+
Sbjct: 729 GLFGGL 734
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 ELGGLFGGVE 10
+L G++ G+E
Sbjct: 677 DLEGMYSGIE 686
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 ELGGLFGGVE 10
+L G++ G+E
Sbjct: 678 DLEGMYSGIE 687
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 ELGGLFGGVE 10
+L G++ G+E
Sbjct: 678 DLEGMYSGIE 687
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 ELGGLFGGVE 10
+L G++ G+E
Sbjct: 678 DLEGMYSGIE 687
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ELGGLFG 7
ELG +FG
Sbjct: 467 ELGAVFG 473
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ELGGLFG 7
ELG +FG
Sbjct: 468 ELGAVFG 474
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 GLFGG 8
GLFGG
Sbjct: 729 GLFGG 733
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 2 LGGLFGGV 9
+GG+ GG+
Sbjct: 29 VGGMVGGI 36
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 2 LGGLFGGV 9
+GG+ GG+
Sbjct: 29 VGGMVGGI 36
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 5 LFGGVE 10
LFGG E
Sbjct: 217 LFGGTE 222
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 4 GLFGGV 9
GLFGG+
Sbjct: 729 GLFGGL 734
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 LGGLFGGV 9
+GG GGV
Sbjct: 140 IGGPLGGV 147
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 ELGGLFGGVE 10
+L G++ GVE
Sbjct: 678 DLEGMYFGVE 687
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 3 GGLFGGV 9
GG+ GGV
Sbjct: 386 GGVTGGV 392
3|SequenceR|20|11|QQGLGELGGL
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 2 QGLGELGGL 10
+GLGE+ GL
Sbjct: 127 EGLGEVEGL 135
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 QQGLGELGGL 10
+ G+G++GG+
Sbjct: 263 KNGVGKIGGI 272
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 5 GELGGL 10
GE+GGL
Sbjct: 261 GEIGGL 266
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 QQGLGEL 7
+QGLG+L
Sbjct: 1099 RQGLGDL 1105
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 QQGLGEL 7
+QGLG+L
Sbjct: 1096 RQGLGDL 1102
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 GELGGL 10
G+LGGL
Sbjct: 6672 GQLGGL 6677
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 QGLGELG 8
+G+G+LG
Sbjct: 737 EGMGDLG 743
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 QGLGELG 8
+G+G+LG
Sbjct: 737 EGMGDLG 743
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 2 QGLGELG 8
+G+G+LG
Sbjct: 740 EGMGDLG 746
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 QGLGELG 8
+G+G+LG
Sbjct: 740 EGMGDLG 746
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 2 QGLGELG 8
+G+G+LG
Sbjct: 739 EGMGDLG 745
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 2 QGLGELG 8
+G+G+LG
Sbjct: 740 EGMGDLG 746
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 QGLGEL 7
QGLG+L
Sbjct: 578 QGLGDL 583
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 QGLGEL 7
QGLG+L
Sbjct: 578 QGLGDL 583
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QQGLGELG 8
Q+G G+LG
Sbjct: 3087 QRGSGQLG 3094
4|SequenceR|25|16|FHSGVQQGLG
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 FHSGVQQGLG 10
F +GV +G+G
Sbjct: 949 FQAGVMKGVG 958
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 FHSGVQQ 7
FHS VQQ
Sbjct: 1527 FHSVVQQ 1533
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 FHSGVQQ 7
FHS VQQ
Sbjct: 1527 FHSVVQQ 1533
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 FHSGVQQ 7
FHS VQQ
Sbjct: 1527 FHSVVQQ 1533
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 FHSGVQQ 7
FHS VQQ
Sbjct: 1525 FHSVVQQ 1531
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 HSGVQQGL 9
HS VQ+G+
Sbjct: 247 HSSVQRGI 254
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 FHSGVQQGLG 10
+ +GV +G+G
Sbjct: 948 YQAGVMKGVG 957
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 HSGVQQG 8
HS ++QG
Sbjct: 2603 HSSIKQG 2609
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 HSGVQQG 8
HS ++QG
Sbjct: 2603 HSSIKQG 2609
5|SequenceR|30|21|APPLLFHSGV
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 3 PLLFHSG 9
PLLFH+G
Sbjct: 658 PLLFHTG 664
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PLLFHSG 9
PLLFH+G
Sbjct: 658 PLLFHTG 664
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 APPLLFHSGV 10
APPLL HS +
Sbjct: 187 APPLLSHSNL 196
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 APPLLFHS 8
APP + HS
Sbjct: 1352 APPTVAHS 1359
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 PPLLFH 7
PP+ FH
Sbjct: 1097 PPVSFH 1102
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 PPLLFH 7
PP+ FH
Sbjct: 1097 PPVSFH 1102
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 PPLLFH 7
PP+ FH
Sbjct: 1097 PPVSFH 1102
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 PPLLFH 7
PP+ FH
Sbjct: 1097 PPVSFH 1102
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 PPLLFH 7
PP+ FH
Sbjct: 1097 PPVSFH 1102
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 PPLLFH 7
PP+ FH
Sbjct: 1097 PPVSFH 1102
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 PPLLFH 7
PP+ FH
Sbjct: 1097 PPVSFH 1102
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 PPLLFH 7
PP+ FH
Sbjct: 1097 PPVSFH 1102
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 PPLLFH 7
PP+ FH
Sbjct: 1097 PPVSFH 1102
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 PPLLFH 7
PP+ FH
Sbjct: 1097 PPVSFH 1102
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 4 LLFHSG 9
+LFH+G
Sbjct: 395 ILFHTG 400
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LLFHSGV 10
LLFH G+
Sbjct: 58 LLFHRGL 64
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LLFHSGV 10
LLFH G+
Sbjct: 58 LLFHRGL 64
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPLLFHS 8
PP LF+S
Sbjct: 187 PPTLFNS 193
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPLLFHS 8
PP LF+S
Sbjct: 187 PPTLFNS 193
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PLLFHSG 9
P+L+HS
Sbjct: 389 PILYHSA 395
6|SequenceR|35|26|PPREGAPPLL
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 PPREGAPPL 9
PP +GA PL
Sbjct: 2413 PPLDGAGPL 2421
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PPREG 5
PPREG
Sbjct: 438 PPREG 442
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 PPREGAPPLL 10
PPR AP L+
Sbjct: 3 PPRRSAPILV 12
>sp|VPX_HV2CA|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 PREGAPP 8
PRE PP
Sbjct: 4 PRETVPP 10
>sp|VPX_HV2RO|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 PREGAPP 8
PRE PP
Sbjct: 4 PRETVPP 10
>sp|VPX_HV2NZ|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 PREGAPP 8
PRE PP
Sbjct: 4 PRETVPP 10
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 PPREGAPP 8
PP G PP
Sbjct: 469 PPGAGVPP 476
>sp|VPX_HV2SB|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 PREGAPP 8
PRE PP
Sbjct: 4 PRETIPP 10
>sp|VPX_HV2D1|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 PREGAPP 8
PRE PP
Sbjct: 4 PRERVPP 10
>sp|VPX_HV2BE|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 PREGAPP 8
PRE PP
Sbjct: 4 PRERVPP 10
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 1 PPREGAPP 8
PP G PP
Sbjct: 265 PPIFGTPP 272
>sp|VPX_HV2UC|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 PREGAPP 8
PRE PP
Sbjct: 3 PRERVPP 9
>sp|VPX_HV2D2|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 PREGAPP 8
PRE PP
Sbjct: 3 PRERVPP 9
>sp|VPX_HV2EH|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 PREGAPP 8
PRE PP
Sbjct: 3 PRERVPP 9
>sp|VPX_HV2ST|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 PREGAPP 8
PRE PP
Sbjct: 4 PRETIPP 10
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PPREGAPP 8
PP G PP
Sbjct: 510 PPTAGQPP 517
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PPREGAPP 8
PP G PP
Sbjct: 510 PPTAGQPP 517
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PPREGAPPLL 10
PP AP LL
Sbjct: 27 PPSPAAPTLL 36
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 PPREGAP 7
PP GAP
Sbjct: 776 PPSGGAP 782
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPREGAPPLL 10
PP AP LL
Sbjct: 27 PPSPAAPTLL 36
>sp|VPX_HV2G1|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 PREGAPP 8
PRE PP
Sbjct: 4 PRERVPP 10
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 PPREGAP 7
PP GAP
Sbjct: 466 PPGAGAP 472
>sp|CAP6_ADE41|PRE-PROTEIN VI|Human adenovirus F serotype 41
Query: 1 PPREGAPPL 9
PP E APPL
Sbjct: 135 PPLETAPPL 143
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 PPREGAP 7
PP GAP
Sbjct: 467 PPGAGAP 473
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 PPREGAP 7
PP GAP
Sbjct: 466 PPGAGAP 472
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 PPREGAP 7
PP GAP
Sbjct: 466 PPGAGAP 472
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 PPREGAP 7
PP GAP
Sbjct: 468 PPGAGAP 474
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 PPREGAP 7
PP GAP
Sbjct: 466 PPGAGAP 472
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 PPREGAP 7
PP GAP
Sbjct: 468 PPGAGAP 474
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 5 GAPPLL 10
GAPPLL
Sbjct: 1134 GAPPLL 1139
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 5 GAPPLL 10
GAPPLL
Sbjct: 1134 GAPPLL 1139
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 2 PREGAPPLL 10
P+EG P L+
Sbjct: 262 PKEGQPSLV 270
>sp|UL17_HCMVM|PROTEIN UL17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PREGAPPLL 10
PRE + PL+
Sbjct: 85 PREDSEPLM 93
>sp|UL17_HCMVA|UNCHARACTERIZED protein UL17|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PREGAPPLL 10
PRE + PL+
Sbjct: 85 PREDSEPLM 93
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 PPREGAPP 8
PP APP
Sbjct: 19 PPLVSAPP 26
>sp|CAP6_ADE40|PRE-PROTEIN VI|Human adenovirus F serotype 40
Query: 1 PPREGAPPL 9
PP E APPL
Sbjct: 135 PPLEVAPPL 143
>sp|UL17_HCMVT|PROTEIN UL17|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PREGAPPLL 10
PRE + PL+
Sbjct: 85 PREDSEPLM 93
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 PPREGAPP 8
PP APP
Sbjct: 19 PPLVSAPP 26
>sp|VPR_HV2CA|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 PPREGAPP 8
PP +G PP
Sbjct: 9 PPEDGTPP 16
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 2 PREGAPPLL 10
P+EG P L+
Sbjct: 262 PKEGQPSLV 270
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 PREGAPPL 9
PR PPL
Sbjct: 1803 PRTRTPPL 1810
7|SequenceR|40|31|REGLLPPREG
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 REGLLPPREG 10
R LPPREG
Sbjct: 433 RNVYLPPREG 442
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 REGLLPPREG 10
R LPPREG
Sbjct: 431 RNVYLPPREG 440
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LPPREG 10
LPPREG
Sbjct: 437 LPPREG 442
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LPPREG 10
LPPREG
Sbjct: 432 LPPREG 437
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LPPREG 10
LPPREG
Sbjct: 429 LPPREG 434
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LPPREG 10
LPPREG
Sbjct: 432 LPPREG 437
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LPPREG 10
LPPREG
Sbjct: 430 LPPREG 435
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LPPREG 10
LPPREG
Sbjct: 430 LPPREG 435
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LPPREG 10
LPPREG
Sbjct: 429 LPPREG 434
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LPPREG 10
LPPREG
Sbjct: 440 LPPREG 445
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LPPREG 10
LPPREG
Sbjct: 428 LPPREG 433
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LPPREG 10
LPPREG
Sbjct: 438 LPPREG 443
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 LPPREG 10
LPPREG
Sbjct: 435 LPPREG 440
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 EGLLPPR 8
+GLLPP+
Sbjct: 3826 QGLLPPK 3832
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 EGLLPPR 8
+GLLPP+
Sbjct: 3803 QGLLPPK 3809
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 EGLLPPR 8
+GLLPP+
Sbjct: 3826 QGLLPPK 3832
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 EGLLPPR 8
+GLLPP+
Sbjct: 3803 QGLLPPK 3809
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 1 REGLLPPR 8
R G+LPP+
Sbjct: 201 RPGVLPPQ 208
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 REGLLPPREG 10
R+GL P+EG
Sbjct: 632 RQGLEFPKEG 641
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GLLPPRE 9
GL+PP E
Sbjct: 185 GLIPPVE 191
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 REGLLPPR 8
R GLL PR
Sbjct: 1147 RAGLLSPR 1154
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 2 EGLLPPRE 9
E +LPPRE
Sbjct: 70 EEVLPPRE 77
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 2 EGLLPPRE 9
E +LPPRE
Sbjct: 110 EEVLPPRE 117
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 2 EGLLPPRE 9
E +LPPRE
Sbjct: 149 EEVLPPRE 156
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 REGLLPPRE 9
++GL PP E
Sbjct: 180 QQGLCPPIE 188
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 GLLPP 7
GLLPP
Sbjct: 442 GLLPP 446
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 1 REGLLPP 7
R GL+PP
Sbjct: 144 RLGLIPP 150
>sp|E4RF1_ADE02|EARLY 4 ORF1 protein|Human adenovirus C serotype 2
Query: 1 REGLLPPRE 9
REG + PR+
Sbjct: 14 REGAILPRQ 22
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 REGLLPPR 8
R GL+ PR
Sbjct: 1153 RAGLISPR 1160
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 3 GLLPP 7
GLLPP
Sbjct: 17 GLLPP 21
>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GLLPP 7
GLLPP
Sbjct: 18 GLLPP 22
8|SequenceR|45|36|EAASRREGLL
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 4 SRREGLL 10
+RR+GLL
Sbjct: 240 ARRQGLL 246
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 4 SRREGLL 10
+RR+GLL
Sbjct: 240 ARRQGLL 246
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 4 SRREGLL 10
+RR+GLL
Sbjct: 240 ARRQGLL 246
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 4 SRREGLL 10
+RR+GLL
Sbjct: 240 ARRQGLL 246
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 4 SRREGLL 10
+RR+GLL
Sbjct: 240 ARRQGLL 246
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 2 AASRREG 8
AASRR G
Sbjct: 408 AASRRSG 414
9|SequenceR|50|41|GRASREAASR
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 GRASREAASR 10
GR R+A SR
Sbjct: 191 GRCGRQAGSR 200
10|SequenceR|55|46|AAGPGGRASR
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 4 PGGRAS 9
PGGR+S
Sbjct: 291 PGGRSS 296
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 2 AGPGGRA 8
+GP GRA
Sbjct: 467 SGPSGRA 473
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 2 AGPGGRA 8
+GP GRA
Sbjct: 467 SGPSGRA 473
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 AGPGGRA 8
+GP GRA
Sbjct: 483 SGPDGRA 489
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 2 AGPGGRASR 10
AG GGR R
Sbjct: 223 AGQGGRTVR 231
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 AAGPGGR 7
AAGP GR
Sbjct: 481 AAGPEGR 487
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 AAGPGGR 7
AAGP GR
Sbjct: 481 AAGPEGR 487
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 AAGPGGR 7
AAGP GR
Sbjct: 481 AAGPEGR 487
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 3 GPGGRAS 9
GPGG S
Sbjct: 607 GPGGSLS 613
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AAGPGGRAS 9
A P GRAS
Sbjct: 1221 ACNPRGRAS 1229
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 3 GPGGRA 8
GP GRA
Sbjct: 52 GPSGRA 57
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 3 GPGGRA 8
GP GRA
Sbjct: 52 GPSGRA 57
11|SequenceR|60|51|LHALQAAGPG
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 2 HALQAAGP 9
HAL+A GP
Sbjct: 271 HALKAYGP 278
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 3 ALQAAGPG 10
A+Q+ GPG
Sbjct: 201 AMQSLGPG 208
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 3 ALQAAGPG 10
A+Q+ GPG
Sbjct: 205 AMQSLGPG 212
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 LHALQAAGPG 10
HAL A PG
Sbjct: 950 FHALVAKSPG 959
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 LHALQAAGPG 10
HAL A PG
Sbjct: 950 FHALIAKSPG 959
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 2 HALQAAG 8
HAL+AAG
Sbjct: 150 HALEAAG 156
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 2 HALQAAGPG 10
H L+++ PG
Sbjct: 371 HPLESSAPG 379
Query: 2 HALQAAGPG 10
H L+++ PG
Sbjct: 429 HPLESSAPG 437
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LHALQAAGPG 10
LH AAG G
Sbjct: 439 LHTKSAAGYG 448
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LHALQAAGPG 10
LH AAG G
Sbjct: 439 LHTKSAAGYG 448
12|SequenceR|65|56|RLIGHLHALQ
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 IGHLHA 8
+GHLHA
Sbjct: 1226 VGHLHA 1231
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 IGHLHA 8
+GHLHA
Sbjct: 1226 VGHLHA 1231
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 1 RLIGHLHAL 9
RL+ HLH L
Sbjct: 292 RLVPHLHCL 300
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 RLIGHL-HALQ 10
RLIGHL H LQ
Sbjct: 208 RLIGHLRHYLQ 218
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RLIGHL-HALQ 10
RLIGHL H LQ
Sbjct: 208 RLIGHLRHYLQ 218
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RLIGHL-HALQ 10
RLIGHL H LQ
Sbjct: 208 RLIGHLRHYLQ 218
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LIGHLH 7
L GHLH
Sbjct: 586 LFGHLH 591
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LIGHLHALQ 10
++GH+ A+Q
Sbjct: 68 VVGHVAAMQ 76
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LIGHLHALQ 10
++GH+ A+Q
Sbjct: 68 VVGHVAAMQ 76
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 2 LIGHLHALQ 10
LIG++H Q
Sbjct: 1293 LIGYMHKHQ 1301
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 2 LIGHLHAL 9
IGH H L
Sbjct: 131 FIGHEHTL 138
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 2 LIGHLHAL 9
IGH H L
Sbjct: 131 FIGHEHTL 138
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 2 LIGHLHAL 9
IGH H L
Sbjct: 131 FIGHEHTL 138
>sp|V073_ORFSA|PROTEIN ORFV073|Orf virus (strain Goat/Texas/SA00/2000) (OV-SA00)
Query: 1 RLIGHLHAL 9
RL+G HAL
Sbjct: 78 RLLGAYHAL 86
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 IGHLHA 8
+ HLHA
Sbjct: 1225 VAHLHA 1230
>sp|3BHS_VAR67|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Variola
Query: 2 LIGHLHAL 9
IGH H L
Sbjct: 13 FIGHEHTL 20
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 RLIGHLHAL 9
RL+GHL
Sbjct: 97 RLLGHLETF 105
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1226 VGYLHA 1231
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1227 VGYLHA 1232
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1223 VGYLHA 1228
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1229 VGYLHA 1234
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1233 VGYLHA 1238
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1230 VGYLHA 1235
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1231 VGYLHA 1236
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1231 VGYLHA 1236
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1229 VGYLHA 1234
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1229 VGYLHA 1234
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1230 VGYLHA 1235
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1229 VGYLHA 1234
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1229 VGYLHA 1234
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1229 VGYLHA 1234
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1229 VGYLHA 1234
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1229 VGYLHA 1234
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 IGHLHA 8
+G+LHA
Sbjct: 1230 VGYLHA 1235
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 RLIGHLHAL 9
++IG LH L
Sbjct: 6693 KIIGGLHLL 6701
13|SequenceR|70|61|YLQRRRLIGH
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YLQRRRLIG 9
YLQ +RL+G
Sbjct: 588 YLQDQRLLG 596
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 YLQRRRLIG 9
Y Q+RR++G
Sbjct: 199 YTQQRRVVG 207
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 1 YLQRRRLIG 9
Y Q+RR++G
Sbjct: 199 YTQQRRVVG 207
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 YLQRRRLIG 9
Y Q+RR++G
Sbjct: 199 YTQQRRVVG 207
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 YLQRRRLIG 9
Y Q+RR++G
Sbjct: 199 YTQQRRVVG 207
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 1 YLQRRRLIG 9
Y Q+RR++G
Sbjct: 199 YTQQRRVVG 207
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 YLQRRRLIG 9
Y Q+RR++G
Sbjct: 199 YTQQRRVVG 207
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 1 YLQRRRLIG 9
Y Q+RR++G
Sbjct: 199 YTQQRRVVG 207
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 YLQRRRLIG 9
Y Q+RR++G
Sbjct: 199 YTQQRRVVG 207
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 1 YLQRRRLIG 9
Y Q+RR++G
Sbjct: 199 YTQQRRVVG 207
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 1 YLQRRRLIG 9
Y Q+RR++G
Sbjct: 199 YTQQRRVVG 207
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 YLQRRRLIG 9
Y Q+RR++G
Sbjct: 199 YTQQRRVVG 207
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 QRRRLIGH 10
Q RRLIG+
Sbjct: 3361 QVRRLIGN 3368
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 QRRRLIGH 10
Q RRLIG+
Sbjct: 3360 QVRRLIGN 3367
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 QRRRLIGH 10
Q RRLIG+
Sbjct: 3361 QVRRLIGN 3368
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 QRRRLIGH 10
Q R+ IGH
Sbjct: 122 QSRKWIGH 129
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 LQRRRLIGH 10
L++RR IG+
Sbjct: 964 LRKRRTIGN 972
14|SequenceR|75|66|FGTRCYLQRR
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 RCYLQ 8
RCYLQ
Sbjct: 324 RCYLQ 328
Query: 5 CYLQR 9
CY+QR
Sbjct: 527 CYVQR 531
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RCYLQRR 10
RCYLQ +
Sbjct: 432 RCYLQHQ 438
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RCYLQRR 10
RCYLQ +
Sbjct: 432 RCYLQHQ 438
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 FGTRCYL 7
FGT C+L
Sbjct: 17 FGTSCHL 23
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 FGTRCYL 7
FGT C+L
Sbjct: 17 FGTSCHL 23
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 5 CYLQRR 10
C+L+RR
Sbjct: 2041 CFLKRR 2046
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 5 CYLQR 9
CY+QR
Sbjct: 531 CYIQR 535
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 1 FGTRCYLQ 8
FG C++Q
Sbjct: 324 FGAACFVQ 331
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 5 CYLQR 9
CY+QR
Sbjct: 527 CYVQR 531
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 GTRCYL 7
G+RC+L
Sbjct: 235 GSRCWL 240
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 FGTRCYLQ 8
FG C++Q
Sbjct: 458 FGLECHVQ 465
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 5 CYLQR 9
CY+QR
Sbjct: 527 CYVQR 531
>sp|VE7_HPV48|PROTEIN E7|Human papillomavirus type 48
Query: 1 FGTRCYLQ 8
FG RC+ Q
Sbjct: 63 FGIRCFEQ 70
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 1 FGTRCYL 7
FG C+L
Sbjct: 540 FGASCFL 546
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 1 FGTRCYL 7
FG C+L
Sbjct: 540 FGASCFL 546
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 1 FGTRCYL 7
FG C+L
Sbjct: 540 FGASCFL 546
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 1 FGTRCYL 7
FG C+L
Sbjct: 540 FGASCFL 546
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 1 FGTRCYL 7
FG C+L
Sbjct: 540 FGASCFL 546
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 1 FGTRCYL 7
FG C+L
Sbjct: 540 FGASCFL 546
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 FGTRCYL 7
FG C+L
Sbjct: 533 FGASCFL 539
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 1 FGTRCYL 7
FG C+L
Sbjct: 540 FGASCFL 546
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 FGTRCYL 7
FG C+L
Sbjct: 530 FGASCFL 536
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 1 FGTRCYL 7
FG C+L
Sbjct: 540 FGASCFL 546
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 1 FGTRCYL 7
FG C+L
Sbjct: 540 FGASCFL 546
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 1 FGTRCYL 7
FG C+L
Sbjct: 540 FGASCFL 546
15|SequenceR|80|71|LIQLHFGTRC
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LIQLHFGTRC 10
L +LHFG+ C
Sbjct: 28 LKRLHFGSGC 37
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 LHFGTRC 10
+HF TRC
Sbjct: 1283 VHFHTRC 1289
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 1 LIQLHFGTRC 10
+++L+F RC
Sbjct: 439 MVKLNFTVRC 448
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 1 LIQLHFGTRC 10
+++L+F RC
Sbjct: 439 MVKLNFTVRC 448
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 LIQLHFGTR 9
LIQLH R
Sbjct: 109 LIQLHLDLR 117
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LIQLHFGTR 9
LIQLH R
Sbjct: 109 LIQLHLDLR 117
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LIQLHFGTR 9
LIQLH R
Sbjct: 109 LIQLHLDLR 117
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 IQLHF 6
IQLHF
Sbjct: 170 IQLHF 174
16|SequenceR|85|76|VSGDPLIQLH
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 VSGDPLIQL 9
+SGDP I++
Sbjct: 961 LSGDPWIKI 969
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 VSGDPLIQL 9
+SGDP I++
Sbjct: 961 LSGDPWIKI 969
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 VSGDPLIQL 9
+SGDP I++
Sbjct: 961 LSGDPWIKI 969
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 2 SGDPLI 7
SGDPL+
Sbjct: 22 SGDPLV 27
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 DPLIQL 9
DP+IQL
Sbjct: 2950 DPMIQL 2955
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 DPLIQL 9
DP+IQL
Sbjct: 2862 DPMIQL 2867
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 VSGDPLIQL 9
+SGDP I++
Sbjct: 959 LSGDPWIKV 967
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 VSGDPLIQL 9
+SGDP I++
Sbjct: 960 LSGDPWIKV 968
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 VSGDPLIQL 9
+SGDP I++
Sbjct: 960 LSGDPWIKV 968
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VSGDPLIQLH 10
+S +PLIQL
Sbjct: 40 LSNNPLIQLQ 49
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 VSGDPLIQ 8
+SGDP I+
Sbjct: 961 LSGDPWIK 968
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 VSGDPLIQ 8
+SGDP I+
Sbjct: 961 LSGDPWIK 968
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 VSGDPLIQ 8
+SGDP I+
Sbjct: 962 LSGDPWIK 969
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 4 DPLIQLH 10
DP IQ H
Sbjct: 558 DPRIQFH 564
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 DPLIQLH 10
DP IQ H
Sbjct: 558 DPRIQFH 564
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GDPLIQLH 10
GDPL+ H
Sbjct: 34 GDPLVFKH 41
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 4 DPLIQLH 10
DP IQ H
Sbjct: 558 DPRIQFH 564
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 VSGDPLI 7
+SG+PL+
Sbjct: 117 ISGNPLL 123
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 4 DPLIQLH 10
DP ++LH
Sbjct: 529 DPRLELH 535
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 3 GDPLIQL 9
GDP +QL
Sbjct: 172 GDPDVQL 178
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 SGDPLIQ 8
S DP+IQ
Sbjct: 337 SDDPIIQ 343
17|SequenceR|90|81|QRTGQVSGDP
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 3 TGQVSGD 9
+GQ+SGD
Sbjct: 770 SGQISGD 776
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 RTGQVSGDP 10
R QVS DP
Sbjct: 268 RRAQVSADP 276
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 QRTGQVSGDP 10
QR G+V DP
Sbjct: 1954 QRRGRVGRDP 1963
>sp|GL_HHV8P|ENVELOPE glycoprotein L|Human herpesvirus 8 type P
Query: 2 RTGQVSG 8
RTG VSG
Sbjct: 142 RTGSVSG 148
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 3 TGQVSGD 9
TG++SGD
Sbjct: 296 TGELSGD 302
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 2 RTGQVSGD 9
+TG+VSG+
Sbjct: 172 QTGEVSGN 179
>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180
Query: 2 RTGQVSGD 9
+TG+VSG+
Sbjct: 172 QTGEVSGN 179
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 2 RTGQVSGD 9
+TG+VSG+
Sbjct: 172 QTGEVSGN 179
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 2 RTGQVSGD 9
+TG+VSG+
Sbjct: 172 QTGEVSGN 179
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 2 RTGQVSGD 9
+TG+VSG+
Sbjct: 172 QTGEVSGN 179
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 3 TGQVSGD 9
TG+V+GD
Sbjct: 241 TGKVAGD 247
>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70
Query: 2 RTGQVSGD 9
+TG+VSG+
Sbjct: 172 QTGEVSGN 179
18|SequenceR|95|86|FLSHDQRTGQ
>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FLSHDQRTG 9
FLS++ RTG
Sbjct: 290 FLSNEYRTG 298
>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FLSHDQRTG 9
FLS++ RTG
Sbjct: 290 FLSNEYRTG 298
>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P
Query: 1 FLSHD 5
FLSHD
Sbjct: 147 FLSHD 151
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain
Query: 4 HDQRTG 9
H QRTG
Sbjct: 5 HTQRTG 10
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 1 FLSHDQR 7
F+SH++R
Sbjct: 208 FISHEKR 214
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 1 FLSHDQR 7
F+SH++R
Sbjct: 208 FISHEKR 214
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 FLSHDQ 6
FLSH Q
Sbjct: 37 FLSHQQ 42
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 FLSHDQ 6
FLSH Q
Sbjct: 37 FLSHQQ 42
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 FLSHDQ 6
FLSH Q
Sbjct: 37 FLSHQQ 42
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 FLSHDQ 6
FLSH Q
Sbjct: 37 FLSHQQ 42
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 FLSHDQ 6
FLSH Q
Sbjct: 37 FLSHQQ 42
>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3
Query: 2 LSHDQRTG 9
+S+D++TG
Sbjct: 150 VSYDKKTG 157
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 FLSHDQ 6
FLSH Q
Sbjct: 37 FLSHQQ 42
19|SequenceR|100|91|FELIGFLSHD
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 ELIGFLSH 9
+L+GFL+H
Sbjct: 407 DLLGFLAH 414
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 ELIGFLSH 9
+L+GFL+H
Sbjct: 407 DLLGFLAH 414
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 ELIGFLSH 9
+L+GFL+H
Sbjct: 407 DLLGFLAH 414
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 ELIGFLSH 9
+L+GFL+H
Sbjct: 407 DLLGFLAH 414
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 FELIGFLSHD 10
FE++GFL+ +
Sbjct: 2999 FEVLGFLNEE 3008
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 IGFLSH 9
+GFL+H
Sbjct: 337 VGFLTH 342
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 IGFLSH 9
+GFL+H
Sbjct: 337 VGFLTH 342
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 ELIGFLSH 9
EL+ F+SH
Sbjct: 150 ELLEFVSH 157
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 ELIGFLSH 9
EL+ F+SH
Sbjct: 150 ELLEFVSH 157
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 ELIGFLSH 9
EL+ F+SH
Sbjct: 150 ELLEFVSH 157
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 ELIGFLSH 9
+L GFL H
Sbjct: 162 KLAGFLKH 169
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 ELIGFLSH 9
+L GFL H
Sbjct: 162 KLAGFLKH 169
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 ELIGFLSH 9
+L GFL H
Sbjct: 162 KLAGFLKH 169
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 GFLSH 9
GFLSH
Sbjct: 120 GFLSH 124
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 5 GFLSH 9
GFLSH
Sbjct: 120 GFLSH 124
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 2 ELIGFLS 8
ELIG+L+
Sbjct: 680 ELIGYLN 686
20|SequenceR|105|96|VAVSIFELIG
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VAVSIFELIG 10
+AV I EL+G
Sbjct: 774 IAVRIVELLG 783
21|SequenceR|110|101|ISVLGVAVSI
***** No hits found ******
22|SequenceR|115|106|SDVGRISVLG
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 1 SDVGRISV 8
+D GRIS+
Sbjct: 277 ADAGRISL 284
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 SDVGRISV 8
SD+GR+ V
Sbjct: 239 SDLGRLRV 246
23|SequenceR|120|111|GLYLGSDVGR
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 LYLGSDVGR 10
LY G+DVGR
Sbjct: 1904 LYTGADVGR 1912
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 LYLGSDVGR 10
++GSDV R
Sbjct: 2235 FFMGSDVTR 2243
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 775 LYVGSDL 781
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 784 LYVGSDL 790
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 784 LYVGSDL 790
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 774 LYVGSDL 780
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 768 LYVGSDL 774
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 775 LYVGSDL 781
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 767 LYVGSDL 773
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 772 LYVGSDL 778
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 771 LYVGSDL 777
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 771 LYVGSDL 777
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 775 LYVGSDL 781
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 773 LYVGSDL 779
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 771 LYVGSDL 777
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 774 LYVGSDL 780
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 775 LYVGSDL 781
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 769 LYVGSDL 775
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 780 LYVGSDL 786
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 779 LYVGSDL 785
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 773 LYVGSDL 779
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 774 LYVGSDL 780
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 778 LYVGSDL 784
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 774 LYVGSDL 780
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 778 LYVGSDL 784
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 774 LYVGSDL 780
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 786 LYVGSDL 792
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 774 LYVGSDL 780
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 786 LYVGSDL 792
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 786 LYVGSDL 792
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 773 LYVGSDL 779
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 776 LYVGSDL 782
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 774 LYVGSDL 780
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 769 LYVGSDL 775
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 769 LYVGSDL 775
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 769 LYVGSDL 775
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 770 LYVGSDL 776
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LYLGSDV 8
LY+GSD+
Sbjct: 774 LYVGSDL 780
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 GLYLGSD 7
G+Y GSD
Sbjct: 3000 GVYCGSD 3006
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GLYLGSD 7
G+Y GSD
Sbjct: 3000 GVYCGSD 3006
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GLYLGSDVG 9
G YLG+ +G
Sbjct: 802 GQYLGASLG 810
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GLYLGSDVG 9
G YLG+ +G
Sbjct: 802 GQYLGASLG 810
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 GLYLGSDV 8
G+YL SD+
Sbjct: 142 GIYLTSDM 149
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 GLYLGSDV 8
G+YL SD+
Sbjct: 142 GIYLTSDM 149
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 GLYLGSDV 8
G+YL SD+
Sbjct: 142 GIYLTSDM 149
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 GLYLGSDV 8
G+YL SD+
Sbjct: 142 GIYLTSDM 149
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 GLYLGSDV 8
G+YL SD+
Sbjct: 142 GIYLTSDM 149
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 5 GSDVGR 10
G DVGR
Sbjct: 697 GGDVGR 702
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 5 GSDVGR 10
GS+VGR
Sbjct: 949 GSEVGR 954
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 3 YLGSDV 8
YLGSD+
Sbjct: 764 YLGSDM 769
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LYLGSDVG 9
+Y+G D G
Sbjct: 548 IYIGRDAG 555
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LYLGSDVG 9
+Y+G D G
Sbjct: 548 IYIGRDAG 555
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LYLGSDVG 9
+Y+G D G
Sbjct: 548 IYIGRDAG 555
24|SequenceR|125|116|GKDNMGLYLG
>sp|PG031_MONPV|PROTEIN OPG031|Monkeypox virus (MPXV)
Query: 3 DNMGLYL 9
DNMG YL
Sbjct: 85 DNMGYYL 91
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 KDNMGLYLG 10
K+N+GL LG
Sbjct: 111 KNNVGLLLG 119
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 KDNMGLYLG 10
K+N+GL LG
Sbjct: 111 KNNVGLLLG 119
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 KDNMGLYLG 10
K+N+GL LG
Sbjct: 111 KNNVGLLLG 119
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KDNMGLYLG 10
K+N+GL LG
Sbjct: 111 KNNVGLLLG 119
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KDNMGLYLG 10
K+N+GL LG
Sbjct: 111 KNNVGLLLG 119
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 2 KDNMGLYLG 10
K+N+GL LG
Sbjct: 111 KNNVGLLLG 119
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 GKDNMGLYL 9
G+DN+ +YL
Sbjct: 1375 GRDNLLIYL 1383
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 GKDNMGLYL 9
G+DN+ +YL
Sbjct: 1375 GRDNLLIYL 1383
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 GKDNMGLYL 9
G+DN+ +YL
Sbjct: 1375 GRDNLLIYL 1383
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 GKDNMGLYLG 10
G DN G Y G
Sbjct: 1190 GGDNKGTYCG 1199
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 GKDNMGLYL 9
G+DN+ +YL
Sbjct: 1375 GRDNLLVYL 1383
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 GKDNMGLYL 9
G+DN+ +YL
Sbjct: 1376 GRDNLLVYL 1384
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 GKDNMGLYL 9
G+DN+ +YL
Sbjct: 1375 GRDNLLVYL 1383
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 GKDNMGLYL 9
G+DN+ +YL
Sbjct: 1375 GRDNLLVYL 1383
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 GKDNMGLYL 9
G+DN+ +YL
Sbjct: 1376 GRDNLLVYL 1384
>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 KDNMGLYL 9
+DN GLY+
Sbjct: 69 EDNQGLYV 76
>sp|PHOSP_VSIVM|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 KDNMGLYL 9
+DN GLY+
Sbjct: 69 EDNQGLYV 76
>sp|PHOSP_VSIVG|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 KDNMGLYL 9
+DN GLY+
Sbjct: 69 EDNQGLYV 76
>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 KDNMGLY 8
+DN GLY
Sbjct: 69 EDNQGLY 75
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 DNMGLYL 9
DNM +YL
Sbjct: 337 DNMSVYL 343
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 3 DNMGLYL 9
DNM +YL
Sbjct: 337 DNMSVYL 343
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DNMGLYL 9
DNM +YL
Sbjct: 337 DNMSVYL 343
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 3 DNMGLYL 9
DNM +YL
Sbjct: 337 DNMSVYL 343
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 3 DNMGLYL 9
DNM +YL
Sbjct: 337 DNMSVYL 343
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 3 DNMGLYL 9
DNM +YL
Sbjct: 337 DNMSVYL 343
>sp|PG031_VAR67|PROTEIN C4|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 DNMGLYL 9
DN+G YL
Sbjct: 85 DNVGYYL 91
>sp|PG031_VACCC|PROTEIN C4|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DNMGLYL 9
DN+G YL
Sbjct: 85 DNVGYYL 91
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DNMGLYLG 10
DN +YLG
Sbjct: 122 DNTHIYLG 129
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 3 DNMGLYLG 10
DN +YLG
Sbjct: 122 DNTHIYLG 129
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 5 MGLYLG 10
MG YLG
Sbjct: 111 MGYYLG 116
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 5 MGLYLG 10
MG YLG
Sbjct: 112 MGYYLG 117
>sp|MATRX_VSIVS|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 4 NMGLYLG 10
N+GLY G
Sbjct: 163 NIGLYKG 169
>sp|MATRX_VSIVN|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 4 NMGLYLG 10
N+GLY G
Sbjct: 163 NIGLYKG 169
>sp|MATRX_VSIVG|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 4 NMGLYLG 10
N+GLY G
Sbjct: 163 NIGLYKG 169
>sp|MATRX_VSIVC|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 4 NMGLYLG 10
N+GLY G
Sbjct: 163 NIGLYKG 169
>sp|MATRX_VSIVA|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 4 NMGLYLG 10
N+GLY G
Sbjct: 163 NIGLYKG 169
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 4 NMGLYLG 10
N+GLY G
Sbjct: 163 NIGLYKG 169
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 GKDNMG 6
G+DN+G
Sbjct: 538 GRDNVG 543
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 GKDNMG 6
G+DN+G
Sbjct: 538 GRDNVG 543
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 1 GKDNMG 6
G+DN+G
Sbjct: 204 GRDNVG 209
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 3 DNMGLYLG 10
DN+ +Y G
Sbjct: 33 DNLRIYFG 40
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DNMGLYLG 10
DN+ +Y G
Sbjct: 33 DNLRIYFG 40
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 4 NMGLYL 9
N+GLYL
Sbjct: 443 NVGLYL 448
>sp|PHOSP_VSIVC|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 KDNMGLYL 9
+DN GL++
Sbjct: 69 EDNQGLFV 76
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DNMGLYLG 10
+N+GLY+
Sbjct: 121 ENVGLYVA 128
25|SequenceR|130|121|SGYLEGKDNM
>sp|TRM2_HCMVM|TRIPARTITE terminase subunit 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SGYLEGKD 8
+G LEGKD
Sbjct: 144 NGILEGKD 151
>sp|TRM2_HCMVA|TRIPARTITE terminase subunit 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SGYLEGKD 8
+G LEGKD
Sbjct: 144 NGILEGKD 151
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SGYLEGKDNM 10
SGYL+ DN+
Sbjct: 1029 SGYLKLTDNV 1038
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SGYLEGKDNM 10
SGYL+ DN+
Sbjct: 1029 SGYLKLTDNV 1038
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 SGYLEGK 7
+GY+EGK
Sbjct: 239 NGYIEGK 245
>sp|IR08_HCMVA|UNCHARACTERIZED protein IRL8|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SGYLEGKDNM 10
SG EG+D M
Sbjct: 19 SGASEGEDGM 28
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 GYLEG 6
GYLEG
Sbjct: 1051 GYLEG 1055
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 GYLEG 6
GYLEG
Sbjct: 1051 GYLEG 1055
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 GYLEG 6
GYLEG
Sbjct: 1051 GYLEG 1055
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 GYLEG 6
GYLEG
Sbjct: 1051 GYLEG 1055
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 GYLEG 6
GYLEG
Sbjct: 1051 GYLEG 1055
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 GYLEG 6
GYLEG
Sbjct: 1048 GYLEG 1052
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 GYLEG 6
GYLEG
Sbjct: 1048 GYLEG 1052
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 GYLEG 6
GYLEG
Sbjct: 1049 GYLEG 1053
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 GYLEG 6
GYLEG
Sbjct: 1049 GYLEG 1053
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 GYLEG 6
GYLEG
Sbjct: 1048 GYLEG 1052
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 GYLEG 6
GYLEG
Sbjct: 1048 GYLEG 1052
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 YLEGKDN 9
Y GKDN
Sbjct: 273 YWHGKDN 279
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 YLEGKDN 9
Y GKDN
Sbjct: 281 YWHGKDN 287
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 YLEGKDN 9
Y GKDN
Sbjct: 272 YWHGKDN 278
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 YLEGKDN 9
Y GKDN
Sbjct: 282 YWHGKDN 288
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SGYLEGKDNM 10
+GYL+ DN+
Sbjct: 1007 TGYLKLTDNV 1016
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SGYLEGKDNM 10
+GYL+ DN+
Sbjct: 1007 TGYLKLTDNV 1016
>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)
Query: 1 SGYLEGKDNM 10
S Y+E ++NM
Sbjct: 43 SKYVEKEENM 52
26|SequenceR|135|126|STLKESGYLE
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 STLKESGY 8
STL ESG+
Sbjct: 373 STLAESGF 380
>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 LKESGYLE 10
LKE YLE
Sbjct: 61 LKEEAYLE 68
27|SequenceR|140|131|RFICESTLKE
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas)
Query: 1 RFICES 6
RF+CE+
Sbjct: 65 RFVCEA 70
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RFICEST 7
R +CEST
Sbjct: 340 RIVCEST 346
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RFICEST 7
R +CEST
Sbjct: 340 RIVCEST 346
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 1 RFICEST 7
R +CEST
Sbjct: 340 RIVCEST 346
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 2 FICESTLKE 10
IC TL+E
Sbjct: 321 LICNRTLRE 329
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 2 FICESTLKE 10
IC TL+E
Sbjct: 320 LICNRTLRE 328
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 5 ESTLKE 10
ESTLKE
Sbjct: 578 ESTLKE 583
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 4 CESTLKE 10
CE TL++
Sbjct: 349 CEDTLRD 355
28|SequenceR|145|136|EEFQERFICE
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEFQERFICE 10
EE +RF+C+
Sbjct: 264 EEQDKRFVCK 273
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEFQERFICE 10
EE +RF+C+
Sbjct: 84 EEQDKRFVCK 93
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEFQERFICE 10
EE +RF+C+
Sbjct: 364 EEQDKRFVCK 373
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEFQERFICE 10
EE +RF+C+
Sbjct: 364 EEQDKRFVCK 373
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEFQERFICE 10
EE +RF+C+
Sbjct: 364 EEQDKRFVCK 373
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEFQERFICE 10
EE +RF+C+
Sbjct: 133 EEQDKRFVCK 142
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 EEFQERFICE 10
EE +RF+C+
Sbjct: 364 EEQDKRFVCK 373
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEFQERFICE 10
EE +RF+C+
Sbjct: 364 EEQDKRFVCK 373
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEFQERFICE 10
EE +RF+C+
Sbjct: 364 EEQDKRFVCK 373
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 EEFQERFICE 10
EE +RF+C+
Sbjct: 84 EEQDKRFVCK 93
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEFQERFICE 10
EE +RF+C+
Sbjct: 364 EEQDKRFVCK 373
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEFQERFICE 10
EE +RF+C+
Sbjct: 364 EEQDKRFLCK 373
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 EEFQERF 7
EEF++RF
Sbjct: 143 EEFKQRF 149
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 ERFIC 9
ERF+C
Sbjct: 125 ERFVC 129
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 5 ERFIC 9
ERF+C
Sbjct: 125 ERFVC 129
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EFQERFIC 9
+F+E F C
Sbjct: 40 DFKELFFC 47
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EFQERFIC 9
+F+E F C
Sbjct: 40 DFKELFFC 47
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 ERFICE 10
ERF+C+
Sbjct: 141 ERFLCK 146
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 ERFICE 10
ERF+C+
Sbjct: 141 ERFLCK 146
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 EFQERFIC 9
E E+FIC
Sbjct: 1101 ESLEKFIC 1108
29|SequenceR|150|141|TNYWNEEFQE
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 NYWNEEFQE 10
+YW+EE Q+
Sbjct: 1334 DYWDEEQQQ 1342
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 NYWNEEFQE 10
+YW+EE Q+
Sbjct: 1334 DYWDEEQQQ 1342
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 YWNEEFQ 9
YWNE Q
Sbjct: 151 YWNEHGQ 157
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NYWNEE 7
N+WNE+
Sbjct: 4 NHWNEK 9
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NYWNEE 7
N+WNE+
Sbjct: 4 NHWNEK 9
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 2 NYWNEEF 8
+YW EEF
Sbjct: 567 SYWIEEF 573
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 2 NYWNEEF 8
+YW EEF
Sbjct: 567 SYWIEEF 573
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 TNYWN 5
T+YWN
Sbjct: 653 TSYWN 657
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 TNYWN 5
T+YWN
Sbjct: 653 TSYWN 657
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NYWNEE 7
NYWN +
Sbjct: 77 NYWNNK 82
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 2 NYWNEE 7
NYWN +
Sbjct: 77 NYWNNK 82
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 2 NYWNEE 7
NYWN +
Sbjct: 77 NYWNNK 82
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 TNYWNEEFQE 10
T Y N FQ+
Sbjct: 1236 TKYRNHHFQQ 1245
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 TNYWNEEFQE 10
T Y N FQ+
Sbjct: 1236 TKYRNHHFQQ 1245
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 2 NYWN 5
NYWN
Sbjct: 103 NYWN 106
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 2 NYWN 5
NYWN
Sbjct: 103 NYWN 106
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TNYWNEEFQ 9
T YW++E +
Sbjct: 776 TRYWSQELK 784
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 NYWN 5
NYWN
Sbjct: 103 NYWN 106
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 2 NYWN 5
NYWN
Sbjct: 103 NYWN 106
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 2 NYWNEEFQ 9
N W +EF+
Sbjct: 361 NVWGDEFE 368
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 2 NYWNEEFQ 9
N W +EF+
Sbjct: 361 NVWGDEFE 368
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 2 NYWNEEFQ 9
N W +EF+
Sbjct: 361 NVWGDEFE 368
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NYWNEEFQ 9
N W +EF+
Sbjct: 361 NVWGDEFE 368
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NYWNEEFQ 9
N W +EF+
Sbjct: 361 NVWGDEFE 368
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 TNYWNEEFQE 10
+ Y NE F+E
Sbjct: 352 STYKNENFKE 361
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 NYWNEEFQE 10
NY +++FQE
Sbjct: 372 NYTSQKFQE 380
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 TNYWNEEFQE 10
+ Y NE F+E
Sbjct: 383 STYKNENFKE 392
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TNYWNEEFQ 9
T YW +E +
Sbjct: 790 TQYWGQELK 798
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 3 YWNEEFQE 10
+W E FQ+
Sbjct: 162 HWLEPFQQ 169
>sp|ORF24_TTVV2|ORF2/4 protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 TNYWNEEFQ 9
+N W EE++
Sbjct: 245 SNDWKEEYE 253
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 2 NYWNE 6
NYWN+
Sbjct: 326 NYWNK 330
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 TNYWNEEF 8
+ +W+E F
Sbjct: 4976 SKFWDESF 4983
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 NYWNEE 7
NYW E
Sbjct: 404 NYWGSE 409
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 NYWNEE 7
NYW E
Sbjct: 404 NYWGSE 409
>sp|ORF24_TTVV1|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (strain VT416)
Query: 1 TNYWNEEFQ 9
+N W EE++
Sbjct: 245 SNDWKEEYE 253
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 NYWNEE 7
NYW E
Sbjct: 404 NYWGSE 409
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 NYWNEE 7
NYW E
Sbjct: 404 NYWGSE 409
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 NYWNEE 7
NYW E
Sbjct: 404 NYWGSE 409
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 NYWNEE 7
NYW E
Sbjct: 404 NYWGSE 409
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 NYWNEEFQE 10
NY E FQE
Sbjct: 372 NYKAESFQE 380
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 NYWNEE 7
NYW E
Sbjct: 404 NYWGSE 409
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 4 WNEEFQE 10
W+E F E
Sbjct: 487 WSENFTE 493
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 1 TNYWNEEFQ 9
T+Y N FQ
Sbjct: 180 THYHNPSFQ 188
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 4 WNEEFQE 10
W+E F E
Sbjct: 487 WSENFTE 493
30|SequenceR|155|146|INSSYTNYWN
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 NSSYTNYW 9
NSS NYW
Sbjct: 298 NSSSVNYW 305
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 INSSYTNYW 9
INS +N+W
Sbjct: 253 INSHSSNWW 261
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 INSSYTNYW 9
INS +N+W
Sbjct: 248 INSHSSNWW 256
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 INSSYTNYW 9
INS +N+W
Sbjct: 253 INSHSSNWW 261
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 INSSYTNYWN 10
INS+Y N+++
Sbjct: 755 INSAYANFYD 764
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 INSSYTNYW 9
INS +N+W
Sbjct: 178 INSHSSNWW 186
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 INSSYTNYW 9
INS +N+W
Sbjct: 117 INSHSSNWW 125
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 INSSYTNYW 9
INSSYT ++
Sbjct: 276 INSSYTEHY 284
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 5 YTNYWN 10
Y N WN
Sbjct: 313 YKNLWN 318
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 5 YTNYWN 10
Y N WN
Sbjct: 313 YKNLWN 318
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 5 YTNYWN 10
Y N WN
Sbjct: 313 YKNLWN 318
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2730 NSTHEMYW 2737
Query: 1 INSSYTNY 8
+ +SY NY
Sbjct: 2323 VTTSYNNY 2330
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2722 NSTHEMYW 2729
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2737 NSTHEMYW 2744
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2734 NSTHEMYW 2741
Query: 1 INSSYTNY 8
+ +SY NY
Sbjct: 2327 VTTSYNNY 2334
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2734 NSTHEMYW 2741
Query: 1 INSSYTNY 8
+ +SY NY
Sbjct: 2327 VTTSYNNY 2334
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2700 NSTHEMYW 2707
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2700 NSTHEMYW 2707
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2700 NSTHEMYW 2707
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2700 NSTHEMYW 2707
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2700 NSTHEMYW 2707
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 NSSYTNY 8
N SY NY
Sbjct: 2641 NESYNNY 2647
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2738 NSTHEMYW 2745
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2704 NSTHEMYW 2711
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2702 NSTHEMYW 2709
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2701 NSTHEMYW 2708
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2704 NSTHEMYW 2711
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2704 NSTHEMYW 2711
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2702 NSTHEMYW 2709
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2702 NSTHEMYW 2709
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2704 NSTHEMYW 2711
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2704 NSTHEMYW 2711
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2704 NSTHEMYW 2711
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2705 NSTHEMYW 2712
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2704 NSTHEMYW 2711
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2742 NSTHEMYW 2749
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2705 NSTHEMYW 2712
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2702 NSTHEMYW 2709
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2739 NSTHEMYW 2746
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2742 NSTHEMYW 2749
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2702 NSTHEMYW 2709
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2734 NSTHEMYW 2741
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 5 YTNYWN 10
Y NYW+
Sbjct: 352 YVNYWD 357
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2732 NSTHEMYW 2739
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NSSYTNYWN 10
N+SY WN
Sbjct: 595 NTSYDTIWN 603
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 1 INSSYTNYW 9
+NSSYT ++
Sbjct: 276 MNSSYTEHY 284
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NSSYTN 7
NSSYTN
Sbjct: 399 NSSYTN 404
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 INSSYTNYWN 10
++ +Y N W+
Sbjct: 3264 LSKAYANMWS 3273
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 INSSYTNYWN 10
++ +Y N W+
Sbjct: 3265 LSKAYANMWS 3274
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 INSSYTNYWN 10
++ +Y N W+
Sbjct: 3264 LSKAYANMWS 3273
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 INSSYTNYWN 10
++ +Y N W+
Sbjct: 3264 LSKAYANMWS 3273
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 INSSYTNYWN 10
++ +Y N W+
Sbjct: 3265 LSKAYANMWS 3274
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 INSSYTNYWN 10
++ +Y N W+
Sbjct: 3264 LSKAYANMWS 3273
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 INSSYTNYWN 10
++ +Y N W+
Sbjct: 3264 LSKAYANMWS 3273
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 NSSYTNYW 9
NS++ YW
Sbjct: 2741 NSNHEMYW 2748
31|SequenceR|160|151|DGHKYINSSY
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBAD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBAC|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBYA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBHT|NON-STRUCTURAL protein 1|Influenza B virus (strain B/HT/1984)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 1 DGHKYINSSY 10
DGH+ +NS +
Sbjct: 235 DGHRILNSLF 244
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 GHKYINSS 9
GH Y+N++
Sbjct: 309 GHAYVNTT 316
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 2 GHKYINSSY 10
GH YIN +
Sbjct: 560 GHNYINEIF 568
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 DGHKYINSS 9
DG+ Y+N S
Sbjct: 277 DGNHYLNES 285
>sp|PG001_MONPV|CHEMOKINE-BINDING protein|Monkeypox virus (MPXV)
Query: 1 DGHKYINSS 9
DG KY++ S
Sbjct: 217 DGFKYVDGS 225
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 DGHKYINSS 9
D ++YINS+
Sbjct: 432 DTYRYINSA 440
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 2 GHKYINSSY 10
G ++N+SY
Sbjct: 353 GRNFLNTSY 361
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 2 GHKYINSSY 10
G ++N+SY
Sbjct: 353 GRNFLNTSY 361
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 HKYINSSY 10
H++INS +
Sbjct: 1963 HEWINSDW 1970
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 3 HKYINS 8
H+YINS
Sbjct: 254 HEYINS 259
>sp|PG001_VAR67|CHEMOKINE-BINDING protein|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DGHKYINSSY 10
DG KY++ S
Sbjct: 224 DGFKYVDGSV 233
>sp|PG001_VACCL|CHEMOKINE-BINDING protein|Vaccinia virus (strain Lister) (VACV)
Query: 1 DGHKYINSS 9
DG KY++ S
Sbjct: 229 DGFKYVDGS 237
>sp|PG001_VACCC|INACTIVE chemokine-binding protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DGHKYINSS 9
DG KY++ S
Sbjct: 215 DGFKYVDGS 223
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 GHKYIN 7
GH Y+N
Sbjct: 146 GHPYLN 151
>sp|PG165_VACCC|PROTEIN OPG165|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KYINSS 9
KYINSS
Sbjct: 206 KYINSS 211
>sp|ORF4A_MERS1|NON-STRUCTURAL protein ORF4a|Middle East respiratory syndrome-related
Query: 3 HKYINSSY 10
KY+NS Y
Sbjct: 12 QKYLNSPY 19
>sp|PG165_MONPV|PROTEIN OPG165|Monkeypox virus (MPXV)
Query: 4 KYINSS 9
KYINSS
Sbjct: 211 KYINSS 216
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 DGHKYINSSY 10
DG +YI+ Y
Sbjct: 156 DGREYISMDY 165
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 1 DGHKYINS 8
D ++YINS
Sbjct: 427 DIYRYINS 434
32|SequenceR|165|156|YRRGTDGHKY
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 3 RGTDGHKY 10
R T+GHKY
Sbjct: 183 RLTEGHKY 190
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GTDGH 8
GTDGH
Sbjct: 457 GTDGH 461
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 492 RNGLDGH 498
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 492 RNGLDGH 498
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 492 RNGLDGH 498
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 495 RNGLDGH 501
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 491 RNGLDGH 497
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 493 RNGLDGH 499
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 492 RNGLDGH 498
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 493 RNGLDGH 499
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 492 RNGLDGH 498
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 494 RNGLDGH 500
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 494 RNGLDGH 500
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 491 RNGLDGH 497
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 2 RRGTDGH 8
R G DGH
Sbjct: 493 RNGLDGH 499
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 RRGTDG 7
RRG DG
Sbjct: 332 RRGADG 337
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 RRGTDG 7
RRG DG
Sbjct: 332 RRGADG 337
>sp|PG209_MONPV|PROTEIN OPG209|Monkeypox virus (MPXV)
Query: 1 YRRGTDG 7
YR G DG
Sbjct: 184 YRNGVDG 190
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 RRGTDG 7
RRG DG
Sbjct: 332 RRGADG 337
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 RRGTDG 7
RRG DG
Sbjct: 332 RRGADG 337
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 YRRGTDGHK 9
Y G DGH+
Sbjct: 2610 YTLGRDGHE 2618
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 YRRGTDGHK 9
Y G DGH+
Sbjct: 2610 YTLGRDGHE 2618
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 YRRGTDGHK 9
Y G DGH+
Sbjct: 2610 YTLGRDGHE 2618
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 RRGTDG 7
RRG DG
Sbjct: 332 RRGADG 337
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 RGTDG 7
RGTDG
Sbjct: 267 RGTDG 271
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 RRGTDG 7
RRG DG
Sbjct: 332 RRGADG 337
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 2 RRGTDG 7
RRG DG
Sbjct: 200 RRGADG 205
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 RRGTDG 7
RRG DG
Sbjct: 332 RRGADG 337
>sp|NP04_HHV11|NUCLEAR protein UL4|Human herpesvirus 1 (strain 17)
Query: 3 RGTDGHKY 10
RG D H Y
Sbjct: 91 RGWDAHMY 98
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 YRRGTD 6
YR GTD
Sbjct: 1100 YRTGTD 1105
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 2 RRGTDG 7
R GTDG
Sbjct: 4 REGTDG 9
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 YRRGTDG 7
YR G DG
Sbjct: 1700 YRAGEDG 1706
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 YRRGTDG 7
YR G DG
Sbjct: 1700 YRAGEDG 1706
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 YRRGTDG 7
YR G DG
Sbjct: 1700 YRAGEDG 1706
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 YRRGTDG 7
YR G DG
Sbjct: 1700 YRAGEDG 1706
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 YRRGTDG 7
YR G DG
Sbjct: 1700 YRAGEDG 1706
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 YRRGTDG 7
YR G DG
Sbjct: 1700 YRAGEDG 1706
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 YRRGTDG 7
YR G DG
Sbjct: 1700 YRAGEDG 1706
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 3 RGTDGH 8
+G DGH
Sbjct: 384 KGPDGH 389
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 YRRGTDG 7
YR G DG
Sbjct: 1700 YRAGEDG 1706
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 YRRGTDG 7
YR G DG
Sbjct: 1700 YRAGEDG 1706
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 4 GTDGH 8
G+DGH
Sbjct: 385 GSDGH 389
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GTDGHKY 10
G DGH +
Sbjct: 380 GVDGHTH 386
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 2 RRGTDG 7
RRG DG
Sbjct: 330 RRGPDG 335
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 1 YRRGTDG 7
Y R TDG
Sbjct: 171 YTRSTDG 177
>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 YRRGTDG 7
Y R TDG
Sbjct: 171 YTRSTDG 177
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 RGTDGH 8
RGT GH
Sbjct: 426 RGTMGH 431
33|SequenceR|170|161|NLAVFYRRGT
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NLAVFYRRG 9
N V+YR G
Sbjct: 1392 NFQVYYREG 1400
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NLAVFYRRG 9
N V+YR G
Sbjct: 1393 NFQVYYREG 1401
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NLAVFYRRG 9
N V+YR G
Sbjct: 1391 NFQVYYREG 1399
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NLAVFYRRG 9
N V+YR G
Sbjct: 1392 NFQVYYREG 1400
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NLAVFYRRG 9
N V+YR G
Sbjct: 1390 NFRVYYREG 1398
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 NLAVFYRRGT 10
N+A YRR T
Sbjct: 541 NMATGYRRVT 550
>sp|UL07_HCMVM|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NLAVFYRRG 9
+L FY+RG
Sbjct: 74 HLICFYKRG 82
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 3 AVFYRRG 9
A+F RRG
Sbjct: 102 AIFERRG 108
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 3 AVFYRRG 9
A+F RRG
Sbjct: 102 AIFERRG 108
>sp|UL07_HCMVA|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NLAVFYRRG 9
+L FY+RG
Sbjct: 74 HLICFYKRG 82
>sp|UL08_HCMVA|MEMBRANE protein UL8|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NLAVFYRRG 9
+L FY+RG
Sbjct: 74 HLICFYKRG 82
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NLAVFYRR 8
N A+FY++
Sbjct: 34 NSAIFYKK 41
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 1 NLAVFYRR 8
N A+FY++
Sbjct: 34 NSAIFYKK 41
>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 VFYRRGT 10
VF+++GT
Sbjct: 53 VFHKKGT 59
34|SequenceR|175|166|PTGDKNLAVF
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 1 PTGDKNLAVF 10
P GDK+L+
Sbjct: 197 PNGDKSLSTL 206
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 1 PTGDKNLAVF 10
P GDK+L+
Sbjct: 197 PNGDKSLSTL 206
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 1 PTGDKNLAVF 10
P GDK+L+
Sbjct: 197 PNGDKSLSTL 206
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 TGDKNL 7
TGD+NL
Sbjct: 1773 TGDRNL 1778
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate
Query: 1 PTGDKNL 7
P GDK L
Sbjct: 40 PNGDKRL 46
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTGDKNL 7
PTG +NL
Sbjct: 69 PTGSENL 75
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka
Query: 2 TGDKNLAVF 10
TG+ N AV+
Sbjct: 5 TGESNAAVY 13
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 2 TGDKNLAVF 10
TG+ N AV+
Sbjct: 5 TGESNAAVY 13
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PTGDKNLAVF 10
P G K+++VF
Sbjct: 1803 PEGYKDVSVF 1812
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 GDKNLA 8
GD+NLA
Sbjct: 1684 GDRNLA 1689
35|SequenceR|180|171|RAGDRPTGDK
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 RAGDRPTGD 9
R GD+P+GD
Sbjct: 327 RPGDKPSGD 335
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 RAGDRPTGD 9
R GD+P GD
Sbjct: 327 RPGDKPNGD 335
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 RAGDRPTGD 9
RAG+R T D
Sbjct: 312 RAGERTTSD 320
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 4 DRPTGD 9
DRP GD
Sbjct: 55 DRPVGD 60
>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 RAGDRPT 7
R GD+PT
Sbjct: 92 RCGDQPT 98
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 RAGDRP 6
+AGDRP
Sbjct: 101 KAGDRP 106
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 5 RPTGD 9
RPTGD
Sbjct: 1458 RPTGD 1462
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 5 RPTGD 9
RPTGD
Sbjct: 1457 RPTGD 1461
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 5 RPTGD 9
RPTGD
Sbjct: 1457 RPTGD 1461
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 4 DRPTGD 9
DRP GD
Sbjct: 57 DRPIGD 62
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 4 DRPTGD 9
DRP GD
Sbjct: 58 DRPVGD 63
Query: 1 RAGDRPT 7
R GD+P+
Sbjct: 31 RTGDKPS 37
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 1 RAGDRPTGD 9
RAG+R T D
Sbjct: 313 RAGERTTSD 321
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 1 RAGDRP 6
RAG RP
Sbjct: 77 RAGQRP 82
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 AGDRPTG 8
+G+RP+G
Sbjct: 1508 SGERPSG 1514
>sp|UL107_HCMVA|UNCHARACTERIZED protein UL107|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GDRPTG 8
G RPTG
Sbjct: 58 GQRPTG 63
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 AGDRPTG 8
+G+RP+G
Sbjct: 1510 SGERPSG 1516
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 AGDRPTG 8
+G+RP+G
Sbjct: 1508 SGERPSG 1514
>sp|U6_HHV6Z|UNCHARACTERIZED protein U6|Human herpesvirus 6B (strain Z29)
Query: 2 AGDRPT 7
AG RPT
Sbjct: 28 AGSRPT 33
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 AGDRPTG 8
+G+RP+G
Sbjct: 1505 SGERPSG 1511
Query: 3 GDRPTGDK 10
G+RPT ++
Sbjct: 1872 GERPTAEE 1879
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 AGDRPTG 8
+G+RP+G
Sbjct: 1505 SGERPSG 1511
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1509 GERPSG 1514
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1510 GERPSG 1515
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1513 GERPSG 1518
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1510 GERPSG 1515
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1510 GERPSG 1515
>sp|U6_HHV6U|UNCHARACTERIZED protein U6|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 AGDRPT 7
AG RPT
Sbjct: 42 AGSRPT 47
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1506 GERPSG 1511
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1507 GERPSG 1512
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1511 GERPSG 1516
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1509 GERPSG 1514
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1505 GERPSG 1510
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 GDRPTG 8
G+RP+G
Sbjct: 1503 GERPSG 1508
36|SequenceR|185|176|QHRKSRAGDR
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 QHRKSRAG 8
+HRKSR G
Sbjct: 206 KHRKSRLG 213
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 QHRKSRAG 8
+HRKSR G
Sbjct: 206 KHRKSRLG 213
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 QHRKSRAGD 9
+HR R GD
Sbjct: 420 KHRSERTGD 428
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 1 QHRKSRAGD 9
+HR ++ GD
Sbjct: 421 KHRSAKIGD 429
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 3 RKSRAGDR 10
R SRAG R
Sbjct: 340 RVSRAGQR 347
37|SequenceR|190|181|FHTFKQHRKS
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 1 FHTFKQHRKS 10
FH FK+H ++
Sbjct: 202 FHMFKKHERA 211
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 FHTFKQH 7
FH FK+H
Sbjct: 202 FHMFKKH 208
>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 FHTFKQH 7
FH FK+H
Sbjct: 202 FHMFKKH 208
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 FHTFKQH 7
FH FK+H
Sbjct: 202 FHMFKKH 208
>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 FHTFKQH 7
FH FK+H
Sbjct: 202 FHMFKKH 208
>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 FHTFKQH 7
FH FK+H
Sbjct: 202 FHMFKKH 208
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FHTFKQHRKS 10
FH KQ RKS
Sbjct: 234 FHCDKQPRKS 243
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 1 FHTFKQHRKS 10
FH KQ RKS
Sbjct: 230 FHCDKQPRKS 239
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 1 FHTFKQHRKS 10
FH KQ RKS
Sbjct: 234 FHCDKQPRKS 243
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 1 FHTFKQH 7
FH FK H
Sbjct: 203 FHKFKNH 209
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 FKQHRK 9
FK HRK
Sbjct: 378 FKGHRK 383
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 FHTFKQHRK 9
FH+ QH K
Sbjct: 466 FHSRPQHGK 474
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 FHTFKQHRK 9
FH+ QH K
Sbjct: 466 FHSRPQHGK 474
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 FKQHRK 9
FK+HR+
Sbjct: 408 FKEHRE 413
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 FHTFKQHRK 9
FH+ QH K
Sbjct: 465 FHSRPQHGK 473
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 FHTFKQHRK 9
FH+ QH K
Sbjct: 466 FHSRPQHGK 474
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 FHTFKQHRK 9
FH+ QH K
Sbjct: 465 FHSRPQHGK 473
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 FHTFKQHRK 9
FH+ QH K
Sbjct: 465 FHSRPQHGK 473
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FHTFKQH 7
FH+ +QH
Sbjct: 98 FHSHRQH 104
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 FHTFKQHRK 9
FH+ QH K
Sbjct: 466 FHSRPQHGK 474
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 HTFKQHR 8
HT QH+
Sbjct: 885 HTLSQHQ 891
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 FKQHRK 9
FK HRK
Sbjct: 378 FKGHRK 383
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FHTFKQH 7
FH+ +QH
Sbjct: 98 FHSHRQH 104
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 HTFKQHR 8
HT QH+
Sbjct: 877 HTLSQHQ 883
38|SequenceR|195|186|VPRPLFHTFK
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 2 PRPLFHT 8
P P+FH+
Sbjct: 650 PNPVFHS 656
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 RPLFHTF 9
+PL HTF
Sbjct: 731 KPLIHTF 737
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 RPLFHTF 9
+PL HTF
Sbjct: 731 KPLIHTF 737
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 4 PLFHTF 9
PLFH F
Sbjct: 1017 PLFHGF 1022
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 VPRPLF 6
+PRP+F
Sbjct: 53 IPRPVF 58
Query: 1 VPRPLFH 7
+PRP+F
Sbjct: 329 LPRPVFQ 335
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 VPRPLF 6
+PRP+F
Sbjct: 53 IPRPVF 58
Query: 1 VPRPLFH 7
+PRP+F
Sbjct: 329 LPRPVFQ 335
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 VPRPLF 6
+PRP+F
Sbjct: 53 IPRPVF 58
Query: 1 VPRPLFH 7
+PRP+F
Sbjct: 329 LPRPVFQ 335
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 VPRPLF 6
+PRP+F
Sbjct: 53 IPRPVF 58
Query: 1 VPRPLFH 7
+PRP+F
Sbjct: 329 LPRPVFQ 335
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 VPRPLF 6
+PRP+F
Sbjct: 53 IPRPVF 58
Query: 1 VPRPLFH 7
+PRP+F
Sbjct: 329 LPRPVFQ 335
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 VPRPLF 6
+PRP+F
Sbjct: 53 IPRPVF 58
Query: 1 VPRPLFH 7
+PRP+F
Sbjct: 329 LPRPVFQ 335
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 VPRPLF 6
+PRP+F
Sbjct: 53 IPRPVF 58
Query: 1 VPRPLFH 7
+PRP+F
Sbjct: 329 LPRPVFQ 335
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 VPRPLF 6
+PRP+F
Sbjct: 53 IPRPVF 58
Query: 1 VPRPLFH 7
+PRP+F
Sbjct: 329 LPRPVFQ 335
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 VPRPLF 6
+PRP+F
Sbjct: 53 IPRPVF 58
Query: 1 VPRPLFH 7
+PRP+F
Sbjct: 329 LPRPVFQ 335
>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain
Query: 1 VPRPLF 6
VP PLF
Sbjct: 93 VPEPLF 98
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 VPRPLFHTFK 10
+P P +H F+
Sbjct: 987 LPEPTWHAFE 996
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 VPRPLFHTFK 10
+P P +H F+
Sbjct: 966 LPEPTWHAFE 975
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 VPRPLFHTFK 10
+P P +H F+
Sbjct: 968 LPEPTWHAFE 977
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 VPRPLFHTFK 10
+P P +H F+
Sbjct: 967 LPEPTWHAFE 976
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VPRPLF 6
VPRP F
Sbjct: 319 VPRPRF 324
>sp|V_MUMPM|NON-STRUCTURAL protein V|Mumps virus genotype B (strain
Query: 1 VPRPLF 6
VP PLF
Sbjct: 93 VPEPLF 98
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VPRPLF 6
VPRP F
Sbjct: 319 VPRPQF 324
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VPRPLF 6
VPRP F
Sbjct: 319 VPRPRF 324
>sp|BALF1_EBVG|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VPRPLFH 7
+PRP +H
Sbjct: 20 LPRPFYH 26
>sp|BALF1_EBVB9|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VPRPLFH 7
+PRP +H
Sbjct: 20 LPRPFYH 26
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 2 PRPLF 6
PRPLF
Sbjct: 153 PRPLF 157
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PLFHTF 9
P FHTF
Sbjct: 198 PYFHTF 203
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 VPRPLFHT 8
PRPL T
Sbjct: 837 APRPLIRT 844
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 LFHTFK 10
LF+TFK
Sbjct: 493 LFNTFK 498
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 LFHTFK 10
LF+TFK
Sbjct: 493 LFNTFK 498
39|SequenceR|200|191|VREPDVPRPL
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VREPDVPRPL 10
V+ D PRP+
Sbjct: 332 VKRSDFPRPM 341
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 1 VREPDVPRPL 10
V+ D PRP+
Sbjct: 332 VKRSDFPRPM 341
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 VREPDVPRP 9
V P++P+P
Sbjct: 680 VSPPEIPKP 688
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 VREPDVPRP 9
V P++P+P
Sbjct: 680 VSPPEIPKP 688
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 REPDVPRP 9
R+PD P P
Sbjct: 472 RKPDQPIP 479
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 1 VREPDVPRPL 10
V+ D PRP+
Sbjct: 303 VKRSDFPRPM 312
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 1 VREPDVPRPL 10
V P++ RPL
Sbjct: 206 VSTPEIVRPL 215
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 EPDVPRP 9
EPD P P
Sbjct: 1644 EPDGPTP 1650
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 EPDVPRP 9
EPD P P
Sbjct: 1644 EPDGPTP 1650
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 EPDVPRP 9
EPD P P
Sbjct: 1644 EPDGPTP 1650
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 EPDVPRP 9
EPD P P
Sbjct: 1644 EPDGPTP 1650
>sp|US03_HCMVM|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 VPRPL 10
VPRPL
Sbjct: 21 VPRPL 25
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 EPDVPRP 9
EPD P P
Sbjct: 1644 EPDGPTP 1650
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 VREPDVPRP 9
V P++P+P
Sbjct: 681 VSLPEIPKP 689
>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 VPRPL 10
VPRPL
Sbjct: 21 VPRPL 25
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 VREPDVPR 8
V +P VPR
Sbjct: 326 VLQPSVPR 333
>sp|CEP3_HHV2H|CYTOPLASMIC envelopment protein 3|Human herpesvirus 2 (strain HG52)
Query: 2 REPDVPRP 9
R+PDV RP
Sbjct: 77 RDPDVARP 84
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 1 VREPDVPRPL 10
V P+VP PL
Sbjct: 39 VSNPEVPMPL 48
>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 6 VPRPL 10
VPRPL
Sbjct: 21 VPRPL 25
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 EPDVPRP 9
P+VPRP
Sbjct: 405 SPEVPRP 411
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 REPDVP 7
+EPDVP
Sbjct: 672 KEPDVP 677
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 REPDVP 7
+EPDVP
Sbjct: 672 KEPDVP 677
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 VREPDVPRPL 10
+RE +V RP+
Sbjct: 441 IREKEVHRPV 450
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 VREPDVPRPL 10
+RE +V RP+
Sbjct: 441 IREKEVHRPV 450
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 REPDVP 7
+EPDVP
Sbjct: 672 KEPDVP 677
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 VREPDVPRP 9
+R PD RP
Sbjct: 707 LRRPDCSRP 715
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 VREPDVPRP 9
+R PD RP
Sbjct: 707 LRRPDCSRP 715
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 VREPDVPRP 9
+R PD RP
Sbjct: 707 LRRPDCSRP 715
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 REPDVP 7
REP VP
Sbjct: 2266 REPSVP 2271
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 REPDVP 7
REP VP
Sbjct: 2266 REPSVP 2271
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 REPDVP 7
REP VP
Sbjct: 2266 REPSVP 2271
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 REPDVP 7
REP VP
Sbjct: 2268 REPSVP 2273
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 1 VREPDVPRP 9
+R PD RP
Sbjct: 702 LRRPDCSRP 710
>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 EPDVPRPL 10
EP+VP P+
Sbjct: 190 EPEVPTPV 197
>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 EPDVPRPL 10
EP+VP P+
Sbjct: 190 EPEVPTPV 197
>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 EPDVPRPL 10
EP+VP P+
Sbjct: 190 EPEVPTPV 197
40|SequenceR|205|196|KYLEPVREPD
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 4 EPVREP 9
EPVREP
Sbjct: 576 EPVREP 581
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 2 YLEPVREPD 10
+LEP+ EP+
Sbjct: 95 FLEPICEPN 103
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YLEPVREPD 10
+LEP+ EP+
Sbjct: 93 FLEPICEPN 101
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 YLEPVREPD 10
Y+ PV +PD
Sbjct: 2355 YIHPVMDPD 2363
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LEPVREPD 10
LEP ++PD
Sbjct: 2298 LEPWKDPD 2305
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 3 LEPVREPD 10
L PV EPD
Sbjct: 413 LLPVEEPD 420
>sp|UL92_HHV7J|PROTEIN U63|Human herpesvirus 7 (strain JI)
Query: 3 LEPVREPD 10
+EP EP+
Sbjct: 89 MEPTEEPN 96
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 3 LEPVREP 9
LEP+R P
Sbjct: 594 LEPIRSP 600
>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain
Query: 1 KYLEPVREPD 10
+ LEP+ PD
Sbjct: 190 RSLEPISTPD 199
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 KYLEPV 6
KYLEP+
Sbjct: 296 KYLEPL 301
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 KYLEPV 6
KYLEP+
Sbjct: 296 KYLEPL 301
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 YLEPVREP 9
Y E VR+P
Sbjct: 28 YFEIVRQP 35
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 KYLEPV 6
+YLEPV
Sbjct: 396 RYLEPV 401
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 KYLEPV 6
KYLEP+
Sbjct: 297 KYLEPL 302
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 KYLEPV 6
KYLEP+
Sbjct: 297 KYLEPL 302
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 2 YLEPVREP 9
+ EP+R+P
Sbjct: 324 FREPIRQP 331
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 LEPVREPD 10
+EP ++PD
Sbjct: 2303 VEPWKDPD 2310
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YLEPVREPD 10
Y EP PD
Sbjct: 810 YTEPFISPD 818
>sp|UL24_HHV7J|PROTEIN UL24 homolog|Human herpesvirus 7 (strain JI)
Query: 1 KYLEPVR 7
+YL PVR
Sbjct: 4 EYLPPVR 10
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 3 LEPVREP 9
LEP+R P
Sbjct: 594 LEPIRSP 600
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 3 LEPVREP 9
LEP+R P
Sbjct: 594 LEPIRSP 600
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 YLEPV 6
YLEPV
Sbjct: 397 YLEPV 401
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 3 LEPVREP 9
LEP+R P
Sbjct: 594 LEPIRSP 600
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 3 LEPVREP 9
LEP+R P
Sbjct: 594 LEPIRSP 600
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 YLEPVREP 9
Y E +R+P
Sbjct: 28 YFEVIRQP 35
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 3 LEPVREP 9
++PVR P
Sbjct: 680 MQPVRSP 686
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 LEPVREPD 10
LEP R P+
Sbjct: 759 LEPFRAPN 766
41|SequenceR|211|201|TYMLLDKYLEP
>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)
Query: 1 TYMLLDKYLEP 11
TY+++ KY +P
Sbjct: 66 TYVIIGKYSKP 76
>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TYMLLDKYLEP 11
TY+++ KY +P
Sbjct: 66 TYVIIGKYSKP 76
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 MLLDKYLE 10
ML+D+Y+E
Sbjct: 1801 MLMDEYME 1808
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 YMLLDKYL 9
Y+L+DKY
Sbjct: 460 YVLIDKYF 467
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 MLLDKYLEP 11
+ ++KYL P
Sbjct: 568 LFVEKYLRP 576
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 YMLLDKYLEP 11
Y LL+K ++P
Sbjct: 122 YFLLEKGIKP 131
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 LLDKYLE 10
LL+KYL+
Sbjct: 467 LLEKYLQ 473
>sp|NEF_HV2EH|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 YMLLDKYLE 10
+ +LD YLE
Sbjct: 121 HKILDTYLE 129
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 4 LLDKYLEP 11
L+DKY P
Sbjct: 16 LIDKYTPP 23
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YMLLDKYLEP 11
Y+++DK + P
Sbjct: 149 YLIVDKRIRP 158
>sp|NEF_HV2UC|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 YMLLDKYLE 10
+ +LD YLE
Sbjct: 121 HRILDTYLE 129
THE END