DPOG2_HUMAN Blast Output
Viruses
1|Sequence|1|10|MRSRVAVRAC

>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United

Query: 1 MRSRVAVRAC 10
+RSRV R C
Sbjct: 315 VRSRVMARLC 324




2|Sequence|6|15|AVRACHKVCR

>sp|FIB12_BPPZA|PRENECK appendage protein|Bacillus phage PZA (Bacteriophage PZA)

Query: 1 AVRACHKV 8
++RACH V
Sbjct: 220 SIRACHNV 227


>sp|FIB12_BPPH2|PRE-NECK appendage protein|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 1 AVRACHKV 8
++RACH V
Sbjct: 220 SIRACHNV 227


>sp|NS1_MUMIP|INITIATOR protein NS1|Murine minute virus (strain MVM

Query: 2 VRACHKVC 9
V+ CH +C
Sbjct: 375 VKVCHAIC 382


>sp|NS1_MUMIM|INITIATOR protein NS1|Murine minute virus (strain MVMi)

Query: 2 VRACHKVC 9
V+ CH +C
Sbjct: 375 VKVCHAIC 382


>sp|NS1_PAVL3|INITIATOR protein NS1|Parvovirus LuIII

Query: 2 VRACHKVC 9
++ CH +C
Sbjct: 375 IKVCHAIC 382


>sp|NS1_PAVHH|INITIATOR protein NS1|Hamster parvovirus H1

Query: 2 VRACHKVC 9
++ CH +C
Sbjct: 375 IKVCHAIC 382


>sp|V_SENDA|PROTEIN V|Sendai virus (strain Hamamatsu) (SeV)

Query: 3 RACHKVCR 10
+AC K+C+
Sbjct: 356 KACPKICK 363


>sp|V_SENDO|PROTEIN V|Sendai virus (strain Ohita) (SeV)

Query: 3 RACHKVCR 10
+AC K+C+
Sbjct: 356 KACPKICK 363


>sp|VF859_ASFWA|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 5 CHKVC 9
CH++C
Sbjct: 300 CHRIC 304


>sp|VF859_ASFP4|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 5 CHKVC 9
CH++C
Sbjct: 300 CHRIC 304


>sp|VF859_ASFM2|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 5 CHKVC 9
CH++C
Sbjct: 300 CHRIC 304


>sp|VF859_ASFK5|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 5 CHKVC 9
CH++C
Sbjct: 300 CHRIC 304


>sp|VF859_ASFB7|PROBABLE helicase A859L|African swine fever virus (strain

Query: 5 CHKVC 9
CH++C
Sbjct: 300 CHRIC 304


>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United

Query: 1 AVRACHKVC 9
+V CH +C
Sbjct: 276 SVNDCHAIC 284


>sp|NSP3_ROTBS|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Cow/Japan/Shintoku/1991/G2P[3])

Query: 1 AVRACHKVC 9
+V CH +C
Sbjct: 276 SVNDCHAIC 284


>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)

Query: 4 ACHKVCR 10
AC K CR
Sbjct: 2 ACRKFCR 8




3|Sequence|11|20|HKVCRCLLSG

>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)

Query: 1 HKVCRCLLSG 10
HK+ RCL G
Sbjct: 2066 HKIVRCLQRG 2075


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 2 KVCRCLLSG 10
K+CRCL G
Sbjct: 390 KICRCLKRG 398


>sp|CVC2_ELHVK|CAPSID vertex component 2|Elephantid herpesvirus 1 (isolate Asian

Query: 2 KVCRCLLSG 10
+VCR LL+G
Sbjct: 358 RVCRKLLTG 366


>sp|CP_CSVMV|PUTATIVE Polyprotein CP|Cassava vein mosaic virus (CsVMV)

Query: 1 HKVCRCLLSG 10
HK C+C G
Sbjct: 736 HKACKCYNCG 745


>sp|VPX_HV2D2|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 2 KVCRCLLSG 10
K CRCL G
Sbjct: 84 KGCRCLQEG 92


>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain

Query: 3 VCRCLLSG 10
+CRCL G
Sbjct: 391 ICRCLRRG 398


>sp|VPX_HV2UC|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 2 KVCRCLLSG 10
K CRCL G
Sbjct: 84 KGCRCLQEG 92


>sp|YR579_MIMIV|PUTATIVE ankyrin repeat protein R579|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 CRCLL 8
CRCLL
Sbjct: 404 CRCLL 408


>sp|RPO2_MIMIV|DNA-DIRECTED RNA polymerase subunit 2|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 HKVCRCLLSG 10
HK+ +C L G
Sbjct: 364 HKLLKCYLRG 373


>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)

Query: 1 HKVCRCLLSG 10
HK+ +CL G
Sbjct: 2058 HKIVQCLQRG 2067


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 3 VCRCLLS 9
VC C+LS
Sbjct: 28 VCNCILS 34


>sp|D3_RFVKA|CORE protein D3 homolog|Rabbit fibroma virus (strain Kasza)

Query: 2 KVCRCLL 8
K+C CLL
Sbjct: 36 KLCSCLL 42


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 HKVCRCLL 8
HK+ +C+L
Sbjct: 1400 HKISKCVL 1407


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 HKVCRCLL 8
HK+ +C+L
Sbjct: 1400 HKISKCVL 1407


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 2 KVCRCLLS 9
KVC C LS
Sbjct: 4082 KVCGCWLS 4089


>sp|TEV1_BPT4|INTRON-ASSOCIATED endonuclease 1|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 HKVCRC 6
HK C+C
Sbjct: 148 HKFCKC 153


>sp|VU26_HHV7J|PROTEIN U26|Human herpesvirus 7 (strain JI)

Query: 3 VCRCLL 8
VCRC+L
Sbjct: 99 VCRCML 104


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 2 KVCRCLLS 9
KVC C LS
Sbjct: 4082 KVCGCWLS 4089




4|Sequence|16|25|CLLSGFGGRV

>sp|VNS1_BTV1S|NON-STRUCTURAL protein NS1|Bluetongue virus 1 (isolate South

Query: 1 CLLSGFGGRV 10
CL +G+ GRV
Sbjct: 205 CLYTGYKGRV 214


>sp|RIR1_PSHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 CLLSGFG 7
CLL GFG
Sbjct: 544 CLLQGFG 550


>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3 LSGFGGRV 10
L+G+GGR+
Sbjct: 344 LAGYGGRI 351


>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 LSGFGGRV 10
L+G+GGR+
Sbjct: 344 LAGYGGRI 351


>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 LSGFGGRV 10
L+G+GGR+
Sbjct: 344 LAGYGGRI 351


>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P

Query: 1 CLLSGFGGR 9
C+ + FGGR
Sbjct: 109 CIFNSFGGR 117


>sp|VE2_BPV5|REGULATORY protein E2|Bovine papillomavirus type 5

Query: 1 CLLSGFGGR 9
CL GF GR
Sbjct: 235 CLSRGFAGR 243


>sp|RDRP_CFMVN|REPLICASE polyprotein P2AB|Cocksfoot mottle virus (isolate Dactylis

Query: 2 LLSGFGGRV 10
LLSG+G R+
Sbjct: 154 LLSGWGSRI 162


>sp|P2A_CFMVN|POLYPROTEIN P2A|Cocksfoot mottle virus (isolate Dactylis

Query: 2 LLSGFGGRV 10
LLSG+G R+
Sbjct: 154 LLSGWGSRI 162


>sp|TEG5_PSHV1|TEGUMENT protein UL47 homolog|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 LLSGFGGR 9
++SG+GGR
Sbjct: 589 VISGYGGR 596


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 CLLSGF 6
CLLSGF
Sbjct: 1218 CLLSGF 1223


>sp|VL2_CRPVK|MINOR capsid protein L2|Cottontail rabbit papillomavirus (strain

Query: 3 LSGFGGRV 10
LSG GGRV
Sbjct: 72 LSGGGGRV 79


>sp|KRB2_VACCW|PSEUDOKINASE OPG198|Vaccinia virus (strain Western Reserve)

Query: 1 CLLSGFGGRV 10
C++ FGG++
Sbjct: 208 CMIEWFGGKL 217


>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 CLLSGFGGRV 10
C++ FGG++
Sbjct: 208 CMIEWFGGKL 217


>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)

Query: 1 CLLSGFGGRV 10
C++ FGG++
Sbjct: 208 CMIEWFGGKL 217


>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)

Query: 1 CLLSGFGGRV 10
C++ FGG++
Sbjct: 207 CMIEWFGGKL 216


>sp|YR450_MIMIV|UNCHARACTERIZED protein R450|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LLSGFGGRV 10
LL FGG+V
Sbjct: 279 LLEDFGGKV 287


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 3 LSGFGGR 9
LSG GGR
Sbjct: 2680 LSGIGGR 2686


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 3 LSGFGGR 9
LSG GGR
Sbjct: 2680 LSGIGGR 2686


>sp|CFXQ_MIMIV|PUTATIVE cfxQ-like protein R730|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 CLLSGFGGRV 10
C+++G+G ++
Sbjct: 271 CIIAGYGEQI 280


>sp|VE8E2_BPV5|PROTEIN E8^E2C|Bovine papillomavirus type 5

Query: 1 CLLSGFGGR 9
CL GF GR
Sbjct: 51 CLSRGFAGR 59




5|Sequence|21|30|FGGRVDAGQP

>sp|VPN7_BPPHE|TAIL fiber protein|Enterococcus phage phiEF24C (Enterococcus

Query: 1 FGGRVDAGQP 10
FGGR GQP
Sbjct: 74 FGGRNIVGQP 83


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 2 GGRVDAGQP 10
GGR D+G+P
Sbjct: 210 GGRGDSGRP 218


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 2 GGRVDAGQP 10
GGR D+G+P
Sbjct: 210 GGRGDSGRP 218


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 2 GGRVDAGQP 10
GGR D+G+P
Sbjct: 210 GGRGDSGRP 218


>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 FGGRVDAGQP 10
F GR A QP
Sbjct: 820 FAGRCGANQP 829


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 GGRVDAGQP 10
GG+ D+G+P
Sbjct: 207 GGKGDSGRP 215


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 GGRVDAGQP 10
GG+ D+G+P
Sbjct: 207 GGKGDSGRP 215


>sp|MVP_AMVYS|MOVEMENT protein|Alfalfa mosaic virus (strain YSMV)

Query: 4 RVDAGQP 10
R+DAG P
Sbjct: 271 RIDAGSP 277


>sp|MVP_AMVST|MOVEMENT protein|Alfalfa mosaic virus (strain Strasbourg)

Query: 4 RVDAGQP 10
R+DAG P
Sbjct: 271 RIDAGSP 277


>sp|MVP_AMVLE|MOVEMENT protein|Alfalfa mosaic virus (strain 425

Query: 4 RVDAGQP 10
R+DAG P
Sbjct: 271 RIDAGSP 277


>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)

Query: 2 GGRVDAGQ 9
GGR AGQ
Sbjct: 1211 GGRAKAGQ 1218


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 GGRVDAGQP 10
GG+ D+G+P
Sbjct: 207 GGKGDSGRP 215


>sp|MVP_AMV|MOVEMENT protein|Alfalfa mosaic virus (AMV)

Query: 4 RVDAGQP 10
R+DAG P
Sbjct: 271 RIDAGSP 277


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 2 GGRVDAGQP 10
GG+ D+G+P
Sbjct: 205 GGKGDSGRP 213


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 GGRVDAGQP 10
GG+ D+G+P
Sbjct: 206 GGKGDSGRP 214


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 2 GGRVDAGQP 10
GG+ D+G+P
Sbjct: 205 GGKGDSGRP 213




6|Sequence|26|35|DAGQPELLTE

>sp|NCAP_CVM2|NUCLEOPROTEIN coronavirus (strain 2) (MHV-2)

Query: 1 DAGQPELLTE 10
DAGQP+ +T+
Sbjct: 244 DAGQPKQVTK 253


>sp|NCAP_CVMS|NUCLEOPROTEIN coronavirus (strain S) (MHV-S)

Query: 1 DAGQPELLTE 10
DAGQP+ +T+
Sbjct: 248 DAGQPKQVTK 257


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 2 AGQPELL 8
AGQPEL+
Sbjct: 2146 AGQPELV 2152


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 DAGQPELLTE 10
+AG+P+ LTE
Sbjct: 3651 EAGKPQKLTE 3660


>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)

Query: 1 DAGQPELLTE 10
AGQP LL E
Sbjct: 545 SAGQPSLLRE 554


>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 DAGQPELLTE 10
AGQP LTE
Sbjct: 4 SAGQPASLTE 13


>sp|RDRP_MCMVK|RNA-DIRECTED RNA polymerase|Maize chlorotic mottle virus (isolate

Query: 3 GQPELLTE 10
G PELLT+
Sbjct: 693 GYPELLTQ 700


>sp|DPOZ_BPPMB|DNA polymerase DpoZ|Salmonella phage PMBT28

Query: 1 DAGQPEL 7
DAGQP L
Sbjct: 270 DAGQPSL 276


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 DAGQPELLTE 10
+AG+P+ +TE
Sbjct: 3652 EAGKPQKITE 3661


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 DAGQPELLTE 10
+AG+P+ +TE
Sbjct: 3652 EAGKPQKITE 3661


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 1 DAGQPELLTE 10
+AG+P+ +TE
Sbjct: 3741 EAGKPQKITE 3750


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 DAGQPELLTE 10
+AG+P+ +TE
Sbjct: 3660 EAGKPQKITE 3669


>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)

Query: 1 DAGQPELLTE 10
+GQP LL E
Sbjct: 545 SSGQPSLLRE 554


>sp|NCAP_CVMDV|NUCLEOPROTEIN coronavirus (strain DVIM) (MHV-DVIM)

Query: 1 DAGQPELLTE 10
DAGQP+ +T+
Sbjct: 248 DAGQPKQVTK 257


>sp|NCAP_CVPV|NUCLEOPROTEIN coronavirus (PV) (Puffinosis virus)

Query: 1 DAGQPELLTE 10
DAGQP+ +T+
Sbjct: 248 DAGQPKQVTK 257




7|Sequence|31|40|ELLTERSSPK

>sp|ICP27_GAHVM|MRNA export factor ICP27 homolog|Gallid herpesvirus 2 (strain

Query: 1 ELLTERSSP 9
ELLTER SP
Sbjct: 58 ELLTERPSP 66


>sp|L_LBVAV|RNA-DIRECTED RNA polymerase L|Lettuce big-vein associated virus (isolate

Query: 1 ELLTERSSP 9
ELLTER +P
Sbjct: 997 ELLTERMNP 1005


>sp|GE_PSHV1|ENVELOPE glycoprotein E|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 ELLTERSSPK 10
EL+ E SSP+
Sbjct: 367 ELMAEGSSPR 376




8|Sequence|36|45|RSSPKGGHVK

>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1

Query: 1 RSSPKGGHV 9
RS+P+GGHV
Sbjct: 58 RSTPEGGHV 66


>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2

Query: 1 RSSPKGGHV 9
RS+P+GGHV
Sbjct: 58 RSTPEGGHV 66


>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35

Query: 4 PKGGHV 9
P+GGHV
Sbjct: 36 PQGGHV 41


>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11

Query: 4 PKGGHV 9
P+GGHV
Sbjct: 36 PQGGHV 41


>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11

Query: 4 PKGGHV 9
P+GGHV
Sbjct: 36 PQGGHV 41


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 RSSPKGGHV 9
R S KGGHV
Sbjct: 550 RYSLKGGHV 558


>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human

Query: 1 RSSPKGGHVK 10
R PKG HVK
Sbjct: 250 RFRPKGMHVK 259


>sp|POL2_TORVR|RNA2 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 3 SPKGGHVK 10
+P+GGHV+
Sbjct: 1238 APQGGHVE 1245


>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 1 RSSPKGGHVK 10
R PKG HVK
Sbjct: 250 RFRPKGMHVK 259


>sp|TOP1P_MIMIV|DNA topoisomerase 1 type prokaryotic|Acanthamoeba polyphaga mimivirus

Query: 1 RSSPKGG 7
+S+PKGG
Sbjct: 802 KSAPKGG 808


>sp|VG11_EHV2|UNCHARACTERIZED gene 11 protein|Equine herpesvirus 2 (strain 86/87)

Query: 4 PKGGHVK 10
PKGGH +
Sbjct: 390 PKGGHAE 396




9|Sequence|41|50|GGHVKSHAEL

>sp|POL_RSVSB|GAG-POL polyprotein|Rous sarcoma virus subgroup B

Query: 3 HVKSHAEL 10
HV+SH+E+
Sbjct: 1253 HVRSHSEV 1260


>sp|POL_RSVP|GAG-POL polyprotein|Rous sarcoma virus subgroup C

Query: 3 HVKSHAEL 10
HV+SH+E+
Sbjct: 1253 HVRSHSEV 1260


>sp|POL_ALVA|GAG-POL polyprotein|Avian leukosis virus subgroup A

Query: 3 HVKSHAEL 10
HV+SH+E+
Sbjct: 1253 HVRSHSEV 1260


>sp|Y12K_BPT4|UNCHARACTERIZED 10.8 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 GGHVKSHA 8
GG+VKSH
Sbjct: 83 GGNVKSHG 90


>sp|POL_ALV|GAG-POL polyprotein|Avian leukosis virus (ALV)

Query: 3 HVKSHAEL 10
HV+SH+E+
Sbjct: 1253 HVRSHSEV 1260


>sp|POL_BLVJ|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Japanese

Query: 2 GHVKSHA 8
GHV+SH+
Sbjct: 1098 GHVRSHS 1104


>sp|POL_BLVAU|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Australian)

Query: 2 GHVKSHA 8
GHV+SH+
Sbjct: 1098 GHVRSHS 1104


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 1 GGHVKSHAEL 10
GG V HA+L
Sbjct: 1839 GGRVAQHADL 1848


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 2 GHVKSHAEL 10
GH+++H+ L
Sbjct: 1416 GHIRAHSTL 1424


>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1

Query: 2 GHVKSHAEL 10
GHV++H+ L
Sbjct: 1465 GHVRAHSGL 1473


>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 2 GHVKSHAEL 10
GHV++H+ L
Sbjct: 1464 GHVRAHSGL 1472


>sp|MP_ACLSA|PUTATIVE movement protein|Apple chlorotic leaf spot virus

Query: 1 GGHVKSHAE 9
GGH++ H++
Sbjct: 391 GGHLREHSD 399


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 2 GHVKSHAEL 10
GH+++H+ L
Sbjct: 1461 GHIRAHSGL 1469


>sp|VP5_AQRVG|MICROTUBULE-ASSOCIATED protein VP5|Aquareovirus G (isolate American grass

Query: 2 GHVKSHAEL 10
GHV +AEL
Sbjct: 124 GHVSPNAEL 132




10|Sequence|46|55|SHAELEGNGE

>sp|NCAP_QRFVE|NUCLEOPROTEIN virus (isolate QrfV/Tick/Afghanistan/EG_T_377/1968) (QRFV)

Query: 1 SHAELEGN 8
SHA +EGN
Sbjct: 399 SHARVEGN 406


>sp|CAPSD_BPSAV|MAJOR capsid protein|Salmonella phage ViI

Query: 1 SHAELEGNG 9
S AE+EG+G
Sbjct: 144 SQAEIEGSG 152




11|Sequence|51|60|EGNGEHPEAP

>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8

Query: 1 EGNGEHPEAP 10
EGNGEH +P
Sbjct: 522 EGNGEHRNSP 531


>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 1 EGNGEHPEAP 10
E +GE PE P
Sbjct: 49 ETHGESPEVP 58


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 2 GNGEHPEAP 10
GNG H E+P
Sbjct: 994 GNGWHLESP 1002


>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 EGNGEHPE 8
E NG HPE
Sbjct: 613 EANGNHPE 620


>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 EGNGEHPE 8
E NG HPE
Sbjct: 613 EANGNHPE 620


>sp|CAPSD_GLVWB|MAJOR capsid protein|Giardia lamblia virus (isolate Wang)

Query: 1 EGNGEHPEAP 10
E +GE PE P
Sbjct: 49 ETHGESPEVP 58


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2 GNGEHPEA 9
NG+HP+A
Sbjct: 2222 ANGDHPDA 2229


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 1 EGNGEHPE 8
EGNG +PE
Sbjct: 1721 EGNGSNPE 1728


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 1 EGNGEHPE 8
EGNG +PE
Sbjct: 1721 EGNGSNPE 1728


>sp|OE66_NPVOP|OCCLUSION-DERIVED virus envelope protein E66|Orgyia pseudotsugata multicapsid

Query: 2 GNGEHPEA 9
GNG HP++
Sbjct: 256 GNGLHPDS 263


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 3 NGEHP 7
NGEHP
Sbjct: 1674 NGEHP 1678


>sp|NS1_I67A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Tokyo/3/1967

Query: 3 NGEHPEAP 10
NG HP P
Sbjct: 209 NGRHPLTP 216


>sp|NS1_I69A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/England/878/1969

Query: 3 NGEHPEAP 10
NG HP P
Sbjct: 209 NGRHPLTP 216


>sp|MC014_MCV1|PROTEIN MC014|Molluscum contagiosum virus subtype 1

Query: 3 NGEHPEAP 10
+G HP+AP
Sbjct: 114 SGRHPKAP 121


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 EGNGEHPEAP 10
+G HPE+P
Sbjct: 805 DGYAYHPESP 814


>sp|US8A_HHV11|PROTEIN US8.5|Human herpesvirus 1 (strain 17)

Query: 1 EGNGEHPEAP 10
G HPEAP
Sbjct: 49 SGKAPHPEAP 58


>sp|GPC_BPPM2|UNCHARACTERIZED protein Gp-c|Pseudoalteromonas phage PM2 (Bacteriophage PM2)

Query: 4 GEHPE 8
GEHPE
Sbjct: 58 GEHPE 62


>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)

Query: 6 HPEAP 10
HPEAP
Sbjct: 255 HPEAP 259


>sp|US8A_HHV1F|US8.5 protein|Human herpesvirus 1 (strain F)

Query: 1 EGNGEHPEAP 10
G HPEAP
Sbjct: 49 SGKAPHPEAP 58


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 3 NGEHPEAP 10
+G HPE P
Sbjct: 2918 HGSHPELP 2925


>sp|POL_MMTVB|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 1 EGNGEHPEAP 10
+G+G +PEAP
Sbjct: 607 KGSGLNPEAP 616


>sp|E1B55_ADECR|E1B 55 kDa protein|Canine adenovirus serotype 1 (strain

Query: 1 EGNGEH 6
EGNG H
Sbjct: 310 EGNGSH 315


>sp|E1B55_ADECC|E1B 55 kDa protein|Canine adenovirus serotype 1 (strain

Query: 1 EGNGEH 6
EGNG H
Sbjct: 310 EGNGSH 315


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 EGNGEH 6
EG+GEH
Sbjct: 106 EGHGEH 111


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 GNGEHPE 8
GNGE PE
Sbjct: 695 GNGELPE 701


>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)

Query: 6 HPEAP 10
HPEAP
Sbjct: 255 HPEAP 259


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 EGNGEH 6
EG+GEH
Sbjct: 106 EGHGEH 111


>sp|E1B55_ADECT|E1B 55 kDa protein|Canine adenovirus serotype 2 (strain

Query: 1 EGNGEH 6
EGNG H
Sbjct: 310 EGNGSH 315


>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P

Query: 6 HPEAP 10
HPEAP
Sbjct: 305 HPEAP 309


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1 EGNGEHPEAP 10
+G HPE+P
Sbjct: 807 DGYAFHPESP 816


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 EGNGEHPEAP 10
+G HPE+P
Sbjct: 807 DGYAFHPESP 816


>sp|PRO_MMTVB|GAG-PRO polyprotein|Mouse mammary tumor virus (strain

Query: 1 EGNGEHPEAP 10
+G+G +PEAP
Sbjct: 607 KGSGLNPEAP 616




12|Sequence|56|65|HPEAPGSGEG

>sp|ICP0_SUHVF|E3 ubiquitin-protein ligase ICP0|Suid herpesvirus 1 (strain

Query: 2 PEAPGSGEG 10
PEAP SGEG
Sbjct: 325 PEAPSSGEG 333


>sp|VPL_BPP2|HEAD completion/stabilization protein|Escherichia phage P2

Query: 3 EAPGSGEG 10
EAP SGEG
Sbjct: 10 EAPVSGEG 17


>sp|CIRCN_BPMU|DNA circularization protein N|Escherichia phage Mu (Bacteriophage Mu)

Query: 3 EAPGSGE 9
+APGSGE
Sbjct: 96 DAPGSGE 102


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 2 PEAPGSGEG 10
P+ PG G G
Sbjct: 778 PDCPGVGTG 786


>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 2 PEAPGSGEG 10
P+ PG G G
Sbjct: 778 PDCPGVGTG 786


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 2 PEAPGSGEG 10
P+ PG G G
Sbjct: 778 PDCPGVGTG 786


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 2 PEAPGSGEG 10
P+ PG G G
Sbjct: 778 PDCPGVGTG 786


>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)

Query: 2 PEAPGSGEG 10
P+ PG G G
Sbjct: 773 PDCPGVGTG 781


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 2 PEAPGSGEG 10
P+ PG G G
Sbjct: 772 PDCPGVGTG 780


>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)

Query: 2 PEAPGSGEG 10
P+ PG G G
Sbjct: 774 PDCPGVGTG 782


>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2 PEAPGSGEG 10
P+ PG G G
Sbjct: 772 PDCPGVGTG 780


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 2 PEAPGSGEG 10
P+ PG G G
Sbjct: 767 PDCPGVGTG 775


>sp|NP1_HBOC3|NON-STRUCTURAL protein NP-1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 1 HPEAPG 6
HP+APG
Sbjct: 100 HPDAPG 105


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 2 PEAPGSGEG 10
P+ PG G G
Sbjct: 766 PDCPGVGTG 774


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 2 PEAPGSGEG 10
P+ PG G G
Sbjct: 766 PDCPGVGTG 774


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 2 PEAPGSGEG 10
P+ PG G G
Sbjct: 766 PDCPGVGTG 774


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 1 HPEAPGSGE 9
H EAP SG+
Sbjct: 13 HAEAPDSGD 21


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 1 HPEAPGSGE 9
H EAP SG+
Sbjct: 13 HAEAPDSGD 21


>sp|POL_SIVM2|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm251)

Query: 2 PEAPGSGEG 10
P AP SG G
Sbjct: 124 PTAPSSGRG 132


>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)

Query: 1 HPEAPG 6
HPEAP
Sbjct: 255 HPEAPA 260




13|Sequence|61|70|GSGEGSEALL

>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1 GSGEGSEALL 10
GEGS ALL
Sbjct: 1831 AEGEGSGALL 1840


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1 GSGEGSEALL 10
GEGS ALL
Sbjct: 1831 AEGEGSGALL 1840


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 GSGEGSEALL 10
GEGS ALL
Sbjct: 1832 AEGEGSGALL 1841


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 GSGEGSEALL 10
GEGS ALL
Sbjct: 1832 AEGEGSGALL 1841




14|Sequence|66|75|SEALLEICQR

>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 EALLEICQR 10
EAL EIC++
Sbjct: 641 EALKEICEK 649


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 EALLEICQR 10
EAL EIC++
Sbjct: 642 EALREICEK 650


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 EALLEICQR 10
EAL EIC++
Sbjct: 644 EALREICEK 652


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 EALLEICQR 10
EAL EIC++
Sbjct: 643 EALKEICEK 651


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 EALLEICQR 10
EAL EIC++
Sbjct: 643 EALKEICEK 651


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 EALLEICQR 10
EAL EIC++
Sbjct: 642 EALKEICEK 650


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 EALLEICQR 10
EAL EIC++
Sbjct: 644 EALKEICEK 652


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 EALLEICQR 10
EAL EIC++
Sbjct: 643 EALKEICEK 651


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 EALLEICQR 10
EAL EIC++
Sbjct: 643 EALKEICEK 651


>sp|POL_SIVTN|GAG-POL polyprotein|Simian immunodeficiency virus (isolate TAN1)

Query: 2 EALLEICQ 9
EAL EIC+
Sbjct: 646 EALTEICK 653


>sp|POL_SIVG1|GAG-POL polyprotein|Simian immunodeficiency virus agm.grivet (isolate

Query: 2 EALLEICQR 10
EAL EIC++
Sbjct: 641 EALTEICKQ 649


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 SEALLEICQR 10
+E LLE C+R
Sbjct: 280 TEGLLEWCKR 289




15|Sequence|71|80|EICQRRHFLS

>sp|NSS_TSWVL|NON-STRUCTURAL protein NS-S|Tomato spotted wilt virus (strain

Query: 1 EICQRRHFLS 10
+IC+R++FLS
Sbjct: 388 DICKRKYFLS 397


>sp|CEP3_EHV2|CYTOPLASMIC envelopment protein 3|Equine herpesvirus 2 (strain 86/87)

Query: 2 ICQRRH 7
IC+RRH
Sbjct: 7 ICRRRH 12


>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21

Query: 1 EICQRRHFL 9
+IC R+HF
Sbjct: 142 DICGRKHFF 150


>sp|Y058_OSHVF|UNCHARACTERIZED protein ORF58|Ostreid herpesvirus 1 (isolate France)

Query: 1 EICQRRHFLS 10
+IC+R FL+
Sbjct: 256 DICKRNFFLN 265


>sp|VNS1_AHSV4|NON-STRUCTURAL protein NS1|African horse sickness virus 4

Query: 2 ICQRRHF 8
IC R+HF
Sbjct: 42 ICARQHF 48


>sp|VNS1_AHSV9|NON-STRUCTURAL protein NS1|African horse sickness virus 9

Query: 2 ICQRRHF 8
IC R+HF
Sbjct: 42 ICARQHF 48


>sp|VNS1_AHSV|NON-STRUCTURAL protein NS1|African horse sickness virus (AHSV)

Query: 2 ICQRRHF 8
IC R+HF
Sbjct: 42 ICARQHF 48


>sp|PRIM_ASFK5|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 1 EICQRRH 7
EIC+R H
Sbjct: 294 EICKRMH 300


>sp|PRIM_ASFP4|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 1 EICQRRH 7
EIC+R H
Sbjct: 305 EICKRMH 311


>sp|PRIM_ASFB7|PUTATIVE helicase/primase complex protein|African swine fever virus (strain

Query: 1 EICQRRH 7
EIC+R H
Sbjct: 305 EICKRMH 311


>sp|PRIM_ASFM2|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 1 EICQRRH 7
EIC+R H
Sbjct: 299 EICKRMH 305


>sp|PRIM_ASFWA|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 1 EICQRRH 7
EIC+R H
Sbjct: 305 EICKRMH 311




16|Sequence|76|85|RHFLSGSKQQ

>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 HFLSGSKQQ 10
HFLS +KQQ
Sbjct: 1577 HFLSQTKQQ 1585


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2 HFLSGSKQQ 10
HFLS +KQQ
Sbjct: 1576 HFLSQTKQQ 1584


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2 HFLSGSKQQ 10
HFLS +KQQ
Sbjct: 1579 HFLSQAKQQ 1587


>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RHFLSGSKQQ 10
RH LSG QQ
Sbjct: 551 RHLLSGIVQQ 560


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1572 HFLSQTKQ 1579


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1569 HFLSQTKQ 1576


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1575 HFLSQTKQ 1582


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1576 HFLSQTKQ 1583


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1577 HFLSQTKQ 1584


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1575 HFLSQTKQ 1582


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1575 HFLSQTKQ 1582


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1575 HFLSQTKQ 1582


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1575 HFLSQTKQ 1582


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1575 HFLSQTKQ 1582


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1575 HFLSQTKQ 1582


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1576 HFLSQTKQ 1583


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1571 HFLSQTKQ 1578


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 HFLSGSKQ 9
HFLS +KQ
Sbjct: 1575 HFLSHTKQ 1582


>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 2 HFLSGSKQ 9
HFL G+K+
Sbjct: 847 HFLGGTKR 854


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 2 HFLSGSKQ 9
H+L GS+Q
Sbjct: 1473 HYLQGSEQ 1480


>sp|R1A_LIYV9|REPLICASE polyprotein 1a|Lettuce infectious yellows virus (isolate

Query: 2 HFLSGSKQ 9
HFL G+K+
Sbjct: 847 HFLGGTKR 854


>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)

Query: 2 HFLSGSKQQ 10
H LSGS+ Q
Sbjct: 262 HLLSGSESQ 270




17|Sequence|81|90|GSKQQLSRDS

***** No hits found ******


18|Sequence|86|95|LSRDSLLSGC

>sp|NCAP_MPV15|NUCLEOPROTEIN pneumonia virus (strain 15)

Query: 2 SRDSLLSGC 10
++DSLLS C
Sbjct: 13 NKDSLLSNC 21


>sp|CAPSD_PASV1|CAPSID polyprotein VP90|Porcine astrovirus 1 (PAstV-1)

Query: 4 DSLLSGC 10
DSL++GC
Sbjct: 740 DSLIAGC 746




19|Sequence|91|100|LLSGCHPGFG

>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)

Query: 1 LLSGCHPGFG 10
L +G HPGFG
Sbjct: 1040 LKTGLHPGFG 1049


>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)

Query: 1 LLSGCHPGFG 10
L +G HPGFG
Sbjct: 1040 LKTGLHPGFG 1049


>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 LLSGCHPGFG 10
L SG HPGF
Sbjct: 1065 LKSGLHPGFA 1074


>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United

Query: 2 LSGCHPGFG 10
++ CH GFG
Sbjct: 1446 ITACHDGFG 1454


>sp|VG46_ICHVA|PROBABLE major glycoprotein|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 LSGCHPGFG 10
L+GCH FG
Sbjct: 549 LNGCHGVFG 557


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 2 LSGCHPGF 9
LSG HP F
Sbjct: 1132 LSGLHPSF 1139


>sp|RDRP_PLRVW|PROTEIN P1-P2|Potato leafroll virus (strain

Query: 4 GCHPGF 9
GC PGF
Sbjct: 583 GCPPGF 588


>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain

Query: 4 GCHPGF 9
GC PGF
Sbjct: 583 GCPPGF 588


>sp|MCP_EHV1V|MAJOR capsid protein|Equine herpesvirus 1 (strain V592)

Query: 3 SGCHPGFG 10
+G HPGF
Sbjct: 1042 TGFHPGFA 1049


>sp|MCP_EHV1B|MAJOR capsid protein|Equine herpesvirus 1 (strain Ab4p)

Query: 3 SGCHPGFG 10
+G HPGF
Sbjct: 1042 TGFHPGFA 1049


>sp|Y061_OSHVF|UNCHARACTERIZED protein ORF61|Ostreid herpesvirus 1 (isolate France)

Query: 2 LSGCHPG 8
LS C+PG
Sbjct: 344 LSACNPG 350


>sp|VT2_RFVKA|TUMOR necrosis factor soluble receptor|Rabbit fibroma virus (strain

Query: 3 SGCHPGF 9
+ CHPGF
Sbjct: 41 ASCHPGF 47


>sp|055L_FRG3G|PUTATIVE helicase 055L|Frog virus 3 (isolate Goorha)

Query: 5 CHPGFG 10
C PGFG
Sbjct: 86 CPPGFG 91


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 SGCHPG 8
SGCH G
Sbjct: 56 SGCHTG 61


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 2 LSGCHPGF 9
L+G HP F
Sbjct: 1102 LAGLHPAF 1109


>sp|YR154_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus

Query: 1 LLSGCHPGF 9
+L GCH G
Sbjct: 376 ILVGCHNGL 384


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3503 LSTGCHTG 3510


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3446 LSTGCHTG 3453


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3413 LSTGCHTG 3420


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3451 LSTGCHTG 3458


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3471 LSTGCHTG 3478


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3501 LSTGCHTG 3508


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3413 LSTGCHTG 3420


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3413 LSTGCHTG 3420


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3413 LSTGCHTG 3420


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3413 LSTGCHTG 3420


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3503 LSTGCHTG 3510


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3500 LSTGCHTG 3507


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3446 LSTGCHTG 3453


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3413 LSTGCHTG 3420


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3451 LSTGCHTG 3458


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3471 LSTGCHTG 3478


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3501 LSTGCHTG 3508


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3413 LSTGCHTG 3420


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3413 LSTGCHTG 3420


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3413 LSTGCHTG 3420


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3413 LSTGCHTG 3420


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 LLSGCHPG 8
L +GCH G
Sbjct: 3500 LSTGCHTG 3507


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 LLSGCHPG 8
L SGCH G
Sbjct: 3178 LGSGCHVG 3185


>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGLG 189


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 LLSGCHPG 8
L SGCH G
Sbjct: 3178 LGSGCHVG 3185


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 LLSGCHPG 8
L SGCH G
Sbjct: 3163 LGSGCHVG 3170


>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 1 LLSGCHPG 8
L SGCH G
Sbjct: 3163 LGSGCHVG 3170


>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|PRIM_NPVAC|DNA primase|Autographa californica nuclear polyhedrosis virus

Query: 2 LSGCHPGF 9
L C+PG+
Sbjct: 229 LKQCYPGY 236


>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189


>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig

Query: 3 SGCHPGFG 10
S CH G G
Sbjct: 182 SACHDGMG 189




20|Sequence|96|105|HPGFGPLGVE

>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 5 GPLGVE 10
GPLGVE
Sbjct: 590 GPLGVE 595


>sp|YR636_MIMIV|PUTATIVE FNIP repeat-containing protein R636|Acanthamoeba polyphaga

Query: 3 GFGPLGVE 10
GF PLG+E
Sbjct: 237 GFLPLGLE 244


>sp|POLS_AURAV|STRUCTURAL polyprotein|Aura virus (AURAV)

Query: 2 PGFGPLGVE 10
PG+ PL +E
Sbjct: 828 PGYAPLNLE 836


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 3 GFGPLGV 9
G+GPLGV
Sbjct: 468 GWGPLGV 474


>sp|YR832_MIMIV|PUTATIVE truncated GMC-type inactive oxidoreductase|Acanthamoeba polyphaga

Query: 2 PGFGP 6
PGFGP
Sbjct: 215 PGFGP 219


>sp|MATRX_SHRV|MATRIX protein|Snakehead rhabdovirus (SHRV)

Query: 1 HPGFGPL 7
HP F PL
Sbjct: 65 HPAFNPL 71


>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 PGFGPLGVE 10
PG GPL ++
Sbjct: 567 PGLGPLAIQ 575


>sp|GLYDT_BPPM6|GLYCINYLTRANSFERASE phage M6

Query: 1 HPGFGP 6
H GFGP
Sbjct: 149 HNGFGP 154


>sp|RDRP_OUMVV|RNA-DEPENDENT RNA polymerase|Ourmia melon virus (isolate Melon/Iran/VE9)

Query: 1 HPGFGPLGV 9
HP +G LG+
Sbjct: 651 HPRYGGLGL 659




21|Sequence|101|110|PLGVELRKNL

>sp|J1S_HCMVA|UNCHARACTERIZED protein J1S|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 PLGVELRKN 9
P GV LR+N
Sbjct: 81 PRGVRLRRN 89


>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 PLGVELRKN 9
P GV LR+N
Sbjct: 198 PRGVRLRRN 206


>sp|VPU_HV1RH|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 2 LGVELRKNL 10
+G+E+RK L
Sbjct: 26 VGIEIRKTL 34




22|Sequence|106|115|LRKNLAAEWW

>sp|RDRP_CLBVS|RNA replication polyprotein|Citrus leaf blotch virus (isolate

Query: 2 RKNLAAEW 9
R NLAA+W
Sbjct: 1192 RTNLAADW 1199


>sp|VF423_ASFB7|UNCHARACTERIZED protein E423R|African swine fever virus (strain

Query: 1 LRKNLAAEWW 10
L KN+AAE++
Sbjct: 120 LSKNIAAEYF 129


>sp|DPOZ_BPPMB|DNA polymerase DpoZ|Salmonella phage PMBT28

Query: 1 LRKNLAAEWW 10
+RK+LAA W
Sbjct: 47 IRKDLAAYQW 56


>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 LRKNLAAEWW 10
+R NLA W+
Sbjct: 262 VRANLATPWY 271


>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 LRKNLAAEWW 10
+R NLA W+
Sbjct: 262 VRANLATPWY 271




23|Sequence|111|120|AAEWWTSVVV

>sp|NEEDL_BPKVM|PROTEIN Gp5|Vibrio phage KVP40 (isolate Vibrio

Query: 3 EWWTSVV 9
EWWT VV
Sbjct: 9 EWWTGVV 15


>sp|RDRP_HV19S|PROBABLE RNA-directed RNA polymerase|Helminthosporium victoriae virus-190S

Query: 3 EWWTS 7
EWWTS
Sbjct: 300 EWWTS 304


>sp|POLG_PVCV2|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 3 EWWTSV 8
EWW SV
Sbjct: 904 EWWNSV 909


>sp|POLG_PVCV1|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 3 EWWTSV 8
EWW SV
Sbjct: 903 EWWNSV 908


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 2 AEWWTSV 8
A WW SV
Sbjct: 3409 ARWWASV 3415


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 2 AEWWTSV 8
A WW SV
Sbjct: 3412 ARWWASV 3418


>sp|DPOL_ADEB2|DNA polymerase|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus

Query: 1 AAEWWTSV 8
++EWW+ +
Sbjct: 86 SSEWWSQI 93


>sp|VF244_IIV6|PUTATIVE phosphoesterase 244L|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 EWWTSV 8
EWW +V
Sbjct: 142 EWWKNV 147


>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 AAEWWTS 7
+WWTS
Sbjct: 641 GGKWWTS 647


>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 AAEWWTS 7
+WWTS
Sbjct: 641 GGKWWTS 647


>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 AAEWWTS 7
+WWTS
Sbjct: 641 GGKWWTS 647


>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 AAEWWTS 7
+WWTS
Sbjct: 641 GGKWWTS 647


>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 AAEWWTS 7
+WWTS
Sbjct: 641 GGKWWTS 647


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AAEWWTSV 8
AA WWT +
Sbjct: 1281 AACWWTGI 1288


>sp|PK_BPT7|PROTEIN kinase 0.7|Escherichia phage T7 (Bacteriophage T7)

Query: 3 EWWTSV 8
+WWT++
Sbjct: 56 DWWTTL 61


>sp|POL_BPNNR|DNA Primase-polymerase|Nitratiruptor phage NrS-1

Query: 3 EWWTS 7
EWWT+
Sbjct: 570 EWWTT 574




24|Sequence|116|125|TSVVVFREQV

***** No hits found ******


25|Sequence|121|130|FREQVFPVDA

>sp|NV_HIRRV|NON-VIRION protein|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 1 FREQVFPVD 9
FR+ +FPVD
Sbjct: 96 FRQYLFPVD 104


>sp|PKG1_ADEG1|PACKAGING protein 1|Fowl adenovirus A serotype 1

Query: 1 FREQVFP 7
FREQ FP
Sbjct: 91 FREQHFP 97


>sp|PG068_VACCW|PROTEIN OPG068|Vaccinia virus (strain Western Reserve)

Query: 1 FREQVFPVD 9
FR+ +FP D
Sbjct: 220 FRDYIFPGD 228


>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FREQVFPVD 9
FR+ +FP D
Sbjct: 220 FRDYIFPGD 228


>sp|PG068_VARV|PROTEIN OPG068|Variola virus

Query: 1 FREQVFPVD 9
FR+ +FP D
Sbjct: 220 FRDYIFPGD 228


>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 FREQVFPVD 9
FR+ +FP D
Sbjct: 220 FRDYIFPGD 228


>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)

Query: 1 FREQVFPVD 9
FR+ +FP D
Sbjct: 220 FRDYIFPGD 228




26|Sequence|126|135|FPVDALHHKP

>sp|OE66_NPVOP|OCCLUSION-DERIVED virus envelope protein E66|Orgyia pseudotsugata multicapsid

Query: 2 PVDALHHKP 10
P DALHH P
Sbjct: 117 PGDALHHSP 125


>sp|V204_FOWPN|UNCHARACTERIZED serpin-like protein FPV204|Fowlpox virus (strain NVSL) (FPV)

Query: 1 FPVDALHHKP 10
PV+A+H P
Sbjct: 166 LPVEAIHADP 175


>sp|PTPJ4_MDBVW|PROBABLE tyrosine phosphatase protein J4|Microplitis demolitor bracovirus

Query: 1 FPVDALHHKP 10
+PVD + H P
Sbjct: 186 WPVDNISHHP 195


>sp|PK1_NPVOP|SERINE/THREONINE-PROTEIN kinase 1|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 3 VDALHHKP 10
+D LHH+P
Sbjct: 30 MDVLHHRP 37


>sp|DPOL_TNAVC|DNA polymerase|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 2 PVDALHHK 9
P+D +HH+
Sbjct: 413 PLDMVHHQ 420


>sp|RDRP_BOTVX|RNA replication protein|Botrytis virus X (isolate Botrytis

Query: 1 FPVDALHHKP 10
PV+ALH+ P
Sbjct: 178 LPVEALHNLP 187


>sp|SCP_GAHVM|SMALL capsomere-interacting protein|Gallid herpesvirus 2 (strain

Query: 1 FPVDALHHKP 10
+ +D LHH P
Sbjct: 24 YTLDVLHHYP 33




27|Sequence|131|140|LHHKPGPLLP

>sp|VGLX_BHV1S|GLYCOPROTEIN GX|Bovine herpesvirus 1.2 (strain ST)

Query: 1 LHHKPGPLLP 10
LHHK GP P
Sbjct: 204 LHHKSGPARP 213


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1586 HAKPGPTI 1593


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1578 HAKPGPTI 1585


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1578 HAKPGPTI 1585


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1579 HAKPGPTI 1586


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1582 HAKPGPTI 1589


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1588 HAKPGPTI 1595


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1579 HAKPGPTI 1586


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1577 HAKPGPTI 1584


>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)

Query: 3 HKPGPLLP 10
H PGP +P
Sbjct: 550 HGPGPRVP 557


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1580 HAKPGPTI 1587


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1580 HAKPGPTI 1587


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1596 HAKPGPTI 1603


>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1580 HAKPGPTI 1587


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1580 HAKPGPTI 1587


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1580 HAKPGPTI 1587


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1590 HAKPGPTI 1597


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1591 HAKPGPTI 1598


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1588 HAKPGPTI 1595


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 2 HHKPGPLL 9
H KPGP +
Sbjct: 1589 HAKPGPTI 1596


>sp|CAPSD_TOBSV|CAPSID protein|Tobacco streak virus (strain WC)

Query: 4 KPGPLLP 10
KP PL+P
Sbjct: 222 KPAPLMP 228


>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 1 LHHKPG 6
LHH PG
Sbjct: 679 LHHSPG 684


>sp|BET_FFV|PROTEIN Bet|Feline foamy virus (FFV) (Feline

Query: 5 PGPLLP 10
PGPLLP
Sbjct: 63 PGPLLP 68




28|Sequence|136|145|GPLLPGDSAF

>sp|Y268_SIRV1|UNCHARACTERIZED protein 268|Sulfolobus islandicus rod-shaped virus 1

Query: 2 PLLPGDS 8
P+LPGDS
Sbjct: 233 PILPGDS 239


>sp|VPU_HV1VI|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 1 GPLLPGD 7
GP +PGD
Sbjct: 71 GPFIPGD 77


>sp|VPU_HV193|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 1 GPLLPGD 7
GP +PGD
Sbjct: 71 GPFIPGD 77


>sp|RLIG2_BPT4|RNA ligase 2|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 GPLLPGDSAF 10
GP+LP + F
Sbjct: 57 GPILPAEDFF 66


>sp|TMP_BPT4|TAPE measure protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 GPLLPGDSA 9
GPLLP A
Sbjct: 150 GPLLPAPEA 158


>sp|PORTL_BPN15|PORTAL protein|Escherichia phage N15 (Bacteriophage N15)

Query: 3 LLPGDS 8
LLPGDS
Sbjct: 330 LLPGDS 335


>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)

Query: 1 GPLLPGDSA 9
GP++P D A
Sbjct: 1052 GPIIPKDCA 1060


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 GPLLPGDS 8
GPL+ GD+
Sbjct: 2454 GPLIEGDT 2461


>sp|LYSB_BPML5|ENDOLYSIN B|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 GPLLPGDSA 9
GP LP D+A
Sbjct: 19 GPGLPADTA 27




29|Sequence|141|150|GDSAFRLVSA

>sp|COAT_SSADV|COAT protein|Satellite St. Augustine decline virus

Query: 1 GDSAFRLVS 9
GD AF++VS
Sbjct: 51 GDRAFQVVS 59




30|Sequence|146|155|RLVSAETLRE

***** No hits found ******


31|Sequence|151|160|ETLREILQDK

>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 TLREILQDK 10
T+RE+L D+
Sbjct: 5477 TVREVLSDR 5485


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 TLREILQDK 10
T+RE+L D+
Sbjct: 5454 TVREVLSDR 5462


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 TLREILQDK 10
T+RE+L D+
Sbjct: 5452 TVREVLSDR 5460


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 TLREILQDK 10
T+RE+L D+
Sbjct: 5448 TVREVLSDR 5456


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 TLREILQDK 10
T+RE+L D+
Sbjct: 5460 TVREVLSDR 5468


>sp|BM2_INBMP|MATRIX protein 2|Influenza B virus (strain B/Memphis/12/1997)

Query: 1 ETLREILQD 9
ET++E+L D
Sbjct: 68 ETMKEVLSD 76


>sp|BM2_INBSI|MATRIX protein 2|Influenza B virus (strain B/Singapore/222/1979)

Query: 1 ETLREILQD 9
ET++E+L D
Sbjct: 68 ETMKEVLSD 76




32|Sequence|156|165|ILQDKELSKE

>sp|NCAP_PPRV|NUCLEOPROTEIN virus (PPRV)

Query: 1 ILQDKELSKE 10
I+Q+ ELS+E
Sbjct: 471 IMQEDELSRE 480


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 ILQDKELSKE 10
+L +KE+S+E
Sbjct: 16 VLSNKEISRE 25




33|Sequence|161|170|ELSKEQLVAF

>sp|VL2_PAPVE|MINOR capsid protein L2|European elk papillomavirus (EEPV)

Query: 1 ELSKEQLVAF 10
ELS+EQ+++F
Sbjct: 142 ELSQEQILSF 151


>sp|VE6_HPV61|PROTEIN E6|Human papillomavirus type 61

Query: 1 ELSKEQLVAF 10
EL+ E+L+AF
Sbjct: 33 ELTTEELLAF 42


>sp|YL183_MIMIV|UNCHARACTERIZED protein L183|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ELSKEQLVAF 10
ELSK+Q++ F
Sbjct: 240 ELSKKQIIPF 249




34|Sequence|166|175|QLVAFLENVL

***** No hits found ******


35|Sequence|171|180|LENVLKTSGK

>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 1 LENVLKTSGK 10
LENV+K SG+
Sbjct: 929 LENVVKRSGR 938




36|Sequence|176|185|KTSGKLRENL

>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 2 TSGKLREN 9
T+G+LREN
Sbjct: 1267 TTGELREN 1274




37|Sequence|181|190|LRENLLHGAL

>sp|NDK_MIMIV|NUCLEOSIDE diphosphate kinase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LRENLLHGA 9
+RENL+H +
Sbjct: 106 IRENLIHAS 114


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 3 ENLLHGA 9
ENLLHG
Sbjct: 1291 ENLLHGG 1297


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3 ENLLHGA 9
ENLLHG
Sbjct: 1291 ENLLHGG 1297


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2 RENLLHGAL 10
R ++LHGAL
Sbjct: 805 RVDMLHGAL 813


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 RENLLHGAL 10
R ++LHGAL
Sbjct: 805 RVDMLHGAL 813


>sp|GB_EHV4|ENVELOPE glycoprotein B|Equine herpesvirus 4 (strain 1942)

Query: 1 LRENLLHGA 9
LR+N++H A
Sbjct: 179 LRDNIMHHA 187


>sp|GB_EHV1V|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain V592)

Query: 1 LRENLLHGA 9
LR+N++H A
Sbjct: 238 LRDNIMHHA 246


>sp|GB_EHV1D|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain Kentucky

Query: 1 LRENLLHGA 9
LR+N++H A
Sbjct: 238 LRDNIMHHA 246


>sp|GB_EHV1B|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain Ab4p)

Query: 1 LRENLLHGA 9
LR+N++H A
Sbjct: 238 LRDNIMHHA 246


>sp|GB_EHV1A|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain AB1)

Query: 1 LRENLLHGA 9
LR+N++H A
Sbjct: 238 LRDNIMHHA 246


>sp|GB_EHV1|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain HVS25A)

Query: 1 LRENLLHGA 9
LR+N++H A
Sbjct: 238 LRDNIMHHA 246


>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 1 LRENLLHGAL 10
LRE+L HG +
Sbjct: 388 LRESLEHGKI 397




38|Sequence|186|195|LHGALEHYVN

>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United States/Urbana/1960)

Query: 2 HGALEHYVN 10
H ALEHY N
Sbjct: 1728 HSALEHYNN 1736


>sp|GAG_AVIER|GAG polyprotein|Avian erythroblastosis virus (strain ES4)

Query: 4 ALEHYVN 10
A EHY+N
Sbjct: 502 AFEHYIN 508


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 1 LHGALEHYVN 10
L+ LEHY+N
Sbjct: 1475 LNEELEHYLN 1484


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 1 LHGALEHYVN 10
L+ LEHY+N
Sbjct: 1475 LNEELEHYLN 1484


>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25

Query: 1 LHGALEHY 8
+HG+ HY
Sbjct: 161 MHGSFRHY 168


>sp|POLN_AHEV|NON-STRUCTURAL polyprotein pORF1|Avian hepatitis E virus (isolate

Query: 1 LHGALEHYV 9
+H ALE YV
Sbjct: 71 VHDALEQYV 79


>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12

Query: 1 LHGALEHY 8
LHG +HY
Sbjct: 161 LHGDFKHY 168


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 5 LEHYVN 10
+EHYVN
Sbjct: 602 IEHYVN 607


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 5 LEHYVN 10
+EHYVN
Sbjct: 602 IEHYVN 607


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 5 LEHYVN 10
+EHYVN
Sbjct: 602 IEHYVN 607


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 5 LEHYVN 10
+EHYVN
Sbjct: 602 IEHYVN 607


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 5 LEHYVN 10
+EHYVN
Sbjct: 602 IEHYVN 607


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 5 LEHYVN 10
+EHYVN
Sbjct: 602 IEHYVN 607


>sp|VE1_COPV6|REPLICATION protein E1|Canine oral papillomavirus (strain Y62)

Query: 1 LHGALEHYVN 10
LHG + YVN
Sbjct: 443 LHGVVISYVN 452


>sp|VF118_ASFB7|UNCHARACTERIZED protein A118R|African swine fever virus (strain

Query: 1 LHGALEHYVN 10
L+ ++HY+N
Sbjct: 49 LYNIVQHYIN 58


>sp|VG48_EHV2|TEGUMENT protein G48|Equine herpesvirus 2 (strain 86/87)

Query: 1 LHGALEHYVN 10
LH L+HYV+
Sbjct: 218 LHFILKHYVH 227




39|Sequence|191|200|EHYVNCLDLV

>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 1 EHYVNCLD 8
+HYV CL+
Sbjct: 1806 DHYVGCLE 1813


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 1 EHYVNCLD 8
+HYV CL+
Sbjct: 1812 DHYVGCLE 1819


>sp|POL1_CPMVS|RNA1 polyprotein|Cowpea mosaic virus (strain SB)

Query: 2 HYVNC 6
HYVNC
Sbjct: 1623 HYVNC 1627


>sp|VP4_BTV2A|CORE protein VP4|Bluetongue virus 2 (isolate USA)

Query: 2 HYVNCLDL 9
HYV C DL
Sbjct: 194 HYVGCGDL 201


>sp|VP4_BTV11|CORE protein VP4|Bluetongue virus 11 (isolate USA)

Query: 2 HYVNCLDL 9
HYV C DL
Sbjct: 194 HYVGCGDL 201


>sp|VP4_BTV13|CORE protein VP4|Bluetongue virus 13 (isolate USA)

Query: 2 HYVNCLDL 9
HYV C DL
Sbjct: 194 HYVGCGDL 201


>sp|Y247_ABVP|UNCHARACTERIZED protein ORF247|Acidianus bottle-shaped virus (isolate

Query: 1 EHYVNCLDLV 10
EHYV+ DL+
Sbjct: 84 EHYVHVPDLI 93


>sp|VP4_BTV10|CORE protein VP4|Bluetongue virus 10 (isolate USA)

Query: 2 HYVNCLDL 9
HY+ C DL
Sbjct: 194 HYIGCGDL 201


>sp|SPLR_NPVOP|SPHEROIDIN-LIKE protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 EHYVNCLDLV 10
E + NC DLV
Sbjct: 238 EGFYNCADLV 247


>sp|Y137_AFV1Y|UNCHARACTERIZED protein ORF137|Acidianus filamentous virus 1 (isolate

Query: 4 VNCLDLV 10
VNC+DL+
Sbjct: 101 VNCMDLL 107


>sp|YR008_MIMIV|UNCHARACTERIZED putative helicase R8|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EHYVNCLD 8
+HY NCL+
Sbjct: 937 KHYNNCLN 944


>sp|SPLR_NPVAC|SPHEROIDIN-LIKE protein|Autographa californica nuclear polyhedrosis virus

Query: 1 EHYVNCLDLV 10
E + NC DLV
Sbjct: 239 EGFYNCADLV 248


>sp|YL442_MIMIV|UNCHARACTERIZED protein L442|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 HYVNCLDL 9
HY++ LDL
Sbjct: 169 HYISLLDL 176


>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 1 EHYVNCLDL 9
EHY LDL
Sbjct: 221 EHYPQVLDL 229


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 2 HYVNCLDL 9
HYV+C +L
Sbjct: 1608 HYVSCNNL 1615




40|Sequence|196|205|CLDLVNKRLP

>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)

Query: 1 CLDLVNKRL 9
CL+ VNKRL
Sbjct: 833 CLETVNKRL 841


>sp|CAPSH_ADEP3|HEXON protein|Porcine adenovirus A serotype 3

Query: 3 DLVNKRLP 10
D +NKRLP
Sbjct: 486 DYINKRLP 493


>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 1 CLDLVNKRLP 10
CL+LV +LP
Sbjct: 460 CLELVKAKLP 469


>sp|BP07_BPT4|BASEPLATE wedge protein gp7|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 DLVNKRL 9
DLVNKRL
Sbjct: 1006 DLVNKRL 1012


>sp|POL1_CPSMV|RNA1 polyprotein|Cowpea severe mosaic virus (strain

Query: 1 CLDLVNKR 8
CL +VNKR
Sbjct: 265 CLTVVNKR 272


>sp|ASNS_MIMIV|PROBABLE asparagine synthetase [glutamine-hydrolyzing]|Acanthamoeba

Query: 1 CLDLVNKRLP 10
CLD +N R P
Sbjct: 23 CLDKLNNRGP 32


>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)

Query: 3 DLVNKRLP 10
DL+N+R P
Sbjct: 300 DLINRRTP 307


>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)

Query: 1 CLDLVNKRL 9
C++LVN R+
Sbjct: 21 CINLVNTRI 29


>sp|HMUDK_BPS10|5-HMDU DNA kinase|Bacillus phage SP10 (Bacillus phage

Query: 1 CLDLVNKRLP 10
CL+ + KR P
Sbjct: 158 CLERIKKRTP 167


>sp|S2_DPIRV|UNCHARACTERIZED protein S2|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 3 DLVNKRLP 10
+++N+RLP
Sbjct: 706 EIINRRLP 713


>sp|VPRL_VILVK|PROBABLE Vpr-like protein|Maedi visna virus (strain KV1772)

Query: 1 CLDLVNKRLP 10
C D V++R+P
Sbjct: 27 CWDYVSQRVP 36


>sp|RIR2_SHV21|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Saimiriine herpesvirus 2 (strain 11)

Query: 1 CLDLVNKR 8
C+D++N+R
Sbjct: 41 CVDMLNER 48


>sp|VPRL_VILV1|PROBABLE Vpr-like protein|Maedi visna virus (strain 1514

Query: 1 CLDLVNKRLP 10
C D V++R+P
Sbjct: 27 CWDYVSQRVP 36


>sp|VPRL_VILV2|PROBABLE Vpr-like protein|Maedi visna virus (strain 1514

Query: 1 CLDLVNKRLP 10
C D V++R+P
Sbjct: 27 CWDYVSQRVP 36


>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 DLVNKRLP 10
D VNK LP
Sbjct: 235 DFVNKHLP 242


>sp|UL95_SHV21|GENE 34 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 CLDLVNKRLP 10
CLD N LP
Sbjct: 68 CLDFSNLHLP 77




41|Sequence|201|210|NKRLPYGLAQ

>sp|CAPSD_BPHK7|MAJOR capsid protein|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 1 NKRLPYGLA 9
N RL YGLA
Sbjct: 208 NNRLMYGLA 216


>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53

Query: 2 KRLPYGLA 9
KR+PY LA
Sbjct: 450 KRIPYFLA 457


>sp|TMP_BPLC2|PROBABLE tape measure protein|Lactococcus phage c2

Query: 2 KRLPYGLAQ 10
K+ YGLAQ
Sbjct: 260 KQFTYGLAQ 268


>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 RLPYGLA 9
RLP+G+A
Sbjct: 538 RLPFGMA 544


>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 RLPYGLA 9
RLP+G+A
Sbjct: 538 RLPFGMA 544


>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 RLPYGLA 9
RLP+G+A
Sbjct: 538 RLPFGMA 544




42|Sequence|206|215|YGLAQIGVCF

>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 YGLAQIGVC 9
YG A IGVC
Sbjct: 6526 YGTATIGVC 6534


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 1 YGLAQIGVC 9
+G +Q+GVC
Sbjct: 1064 FGFSQLGVC 1072


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 YGLAQIGVC 9
YG A IGVC
Sbjct: 6617 YGSATIGVC 6625


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 YGLAQIGVC 9
YG IGVC
Sbjct: 6576 YGTTTIGVC 6584


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 YGLAQIGVC 9
YG IGVC
Sbjct: 6569 YGTTTIGVC 6577


>sp|DPOL_BPSP1|DNA polymerase|Bacillus phage SP01 (Bacteriophage SP01)

Query: 1 YGLAQIGV 8
+GLA++G+
Sbjct: 54 FGLAEVGI 61




43|Sequence|211|220|IGVCFHPVFD

>sp|L_SFTS|RNA-DIRECTED RNA polymerase L|Dabie bandavirus (Severe fever with

Query: 1 IGVCFHPVF 9
+G+C HP+F
Sbjct: 1250 LGLCLHPLF 1258


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1 IGVCFHPVF 9
+G+C HP+F
Sbjct: 1250 LGLCLHPLF 1258


>sp|YR556_MIMIV|UNCHARACTERIZED protein R556|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 IGVCFH 6
+GVCFH
Sbjct: 210 VGVCFH 215


>sp|V198_FOWPN|PUTATIVE C-type lectin protein FPV198|Fowlpox virus (strain NVSL) (FPV)

Query: 2 GVCFHPVF 9
G+CF P F
Sbjct: 166 GICFSPFF 173


>sp|NSS_INSV|NON-STRUCTURAL protein NS-S|Impatiens necrotic spot virus (INSV)

Query: 4 CFHPVFD 10
CF P+FD
Sbjct: 76 CFVPIFD 82


>sp|GD_PSHV1|ENVELOPE glycoprotein D|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 VCFHPVF 9
VCF PVF
Sbjct: 114 VCFAPVF 120


>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 2 GVCFHPV 8
GVCF+P+
Sbjct: 191 GVCFNPI 197


>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34

Query: 3 VCFHPVF 9
+CF PVF
Sbjct: 195 ICFAPVF 201


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 VCFHPVF 9
VCF+P+F
Sbjct: 2409 VCFYPLF 2415


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 VCFHPVF 9
VCF+P+F
Sbjct: 2412 VCFYPLF 2418


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 3 VCFHPVF 9
VCF+P+F
Sbjct: 2355 VCFYPLF 2361


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 VCFHPVF 9
VCF+P+F
Sbjct: 2409 VCFYPLF 2415


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 VCFHPVF 9
VCF+P+F
Sbjct: 2412 VCFYPLF 2418


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 3 VCFHPVF 9
VCF+P+F
Sbjct: 2355 VCFYPLF 2361


>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974

Query: 1 IGVCFHPV 8
IG CF+P+
Sbjct: 331 IGECFNPI 338


>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956

Query: 1 IGVCFHPV 8
IG CF+P+
Sbjct: 331 IGECFNPI 338


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 2 GVCFHPV 8
G+CF+P+
Sbjct: 191 GICFNPI 197


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 2 GVCFHPV 8
G+CF+P+
Sbjct: 191 GICFNPI 197


>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 CFHPVF 9
C+HP F
Sbjct: 518 CYHPAF 523


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 2 GVCFHPV 8
G+CF+P+
Sbjct: 191 GICFNPI 197


>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 CFHPVF 9
C+HP F
Sbjct: 518 CYHPAF 523


>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4 CFHPVF 9
C+HP F
Sbjct: 518 CYHPAF 523


>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus

Query: 3 VCFHPVFD 10
+C+H +FD
Sbjct: 265 LCYHEMFD 272


>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate

Query: 3 VCFHPVFD 10
+C+H +FD
Sbjct: 265 LCYHEMFD 272


>sp|ETF1_VACCW|EARLY transcription factor 70 kDa|Vaccinia virus (strain Western Reserve)

Query: 3 VCFHPVFD 10
+C+H +FD
Sbjct: 265 LCYHEMFD 272


>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)

Query: 3 VCFHPVFD 10
+C+H +FD
Sbjct: 265 LCYHEMFD 272


>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)

Query: 3 VCFHPVFD 10
+C+H +FD
Sbjct: 265 LCYHEMFD 272


>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 3 VCFHPVFD 10
+C+H +FD
Sbjct: 265 LCYHEMFD 272


>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)

Query: 3 VCFHPVFD 10
+C+H +FD
Sbjct: 265 LCYHEMFD 272


>sp|GH_EHV2|ENVELOPE glycoprotein H|Equine herpesvirus 2 (strain 86/87)

Query: 2 GVCFHPVF 9
CFHP +
Sbjct: 386 ATCFHPFY 393


>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53

Query: 1 IGVCFHPVFD 10
+GV HP+F+
Sbjct: 113 VGVSGHPLFN 122


>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)

Query: 2 GVCFHPV 8
G+CF+PV
Sbjct: 190 GLCFNPV 196


>sp|UDPE_NPVSL|ECDYSTEROID UDP-glucosyltransferase|Spodoptera littoralis nuclear polyhedrosis

Query: 6 HPVFD 10
HPVFD
Sbjct: 255 HPVFD 259


>sp|VL1_COPV6|MAJOR capsid protein L1|Canine oral papillomavirus (strain Y62)

Query: 1 IGVCFHPVFD 10
I V HP FD
Sbjct: 116 ISVTGHPTFD 125


>sp|PORTL_BPAPS|PORTAL protein|Acyrthosiphon pisum secondary endosymbiont phage

Query: 3 VCFHPVFD 10
+C P++D
Sbjct: 155 ICLEPIYD 162


>sp|VFH33_ASFWA|PROTEIN H339R|African swine fever virus (isolate

Query: 2 GVCFHPV 8
G+CF P+
Sbjct: 163 GLCFSPI 169


>sp|VFH33_ASFP4|PROTEIN H339R|African swine fever virus (isolate

Query: 2 GVCFHPV 8
G+CF P+
Sbjct: 163 GLCFSPI 169


>sp|VFH33_ASFM2|PROTEIN H339R|African swine fever virus (isolate

Query: 2 GVCFHPV 8
G+CF P+
Sbjct: 163 GLCFSPI 169


>sp|VFH33_ASFK5|PROTEIN H339R|African swine fever virus (isolate

Query: 2 GVCFHPV 8
G+CF P+
Sbjct: 163 GLCFSPI 169


>sp|VFH33_ASFB7|PROTEIN H339R|African swine fever virus (strain

Query: 2 GVCFHPV 8
G+CF P+
Sbjct: 163 GLCFSPI 169


>sp|36012_ASFWA|PROTEIN MGF 360-12L|African swine fever virus (isolate

Query: 2 GVCFHPVFD 10
+CF+ VFD
Sbjct: 214 ALCFNNVFD 222


>sp|36012_ASFP4|PROTEIN MGF 360-12L|African swine fever virus (isolate

Query: 2 GVCFHPVFD 10
+CF+ VFD
Sbjct: 214 ALCFNNVFD 222


>sp|36012_ASFM2|PROTEIN MGF 360-12L|African swine fever virus (isolate

Query: 2 GVCFHPVFD 10
+CF+ VFD
Sbjct: 214 ALCFNNVFD 222


>sp|36012_ASFK5|PROTEIN MGF 360-12L|African swine fever virus (isolate

Query: 2 GVCFHPVFD 10
+CF+ VFD
Sbjct: 214 ALCFNNVFD 222


>sp|VP3_BTV1A|CORE protein VP3|Bluetongue virus 1 (isolate Australia)

Query: 1 IGVCFHPVF 9
IG C PV+
Sbjct: 206 IGACSEPVY 214


>sp|YR721_MIMIV|UNCHARACTERIZED protein R721|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 IGVCFHPVFD 10
+G+C VFD
Sbjct: 57 VGICEDTVFD 66


>sp|YL373_MIMIV|UNCHARACTERIZED glycosyltransferase L373|Acanthamoeba polyphaga mimivirus (APMV)

Query: 6 HPVFD 10
HPVFD
Sbjct: 130 HPVFD 134


>sp|GP_PHV|ENVELOPMENT polyprotein|Prospect Hill virus (PHV)

Query: 2 GVCFHPV 8
G CF+P+
Sbjct: 188 GTCFNPI 194


>sp|GLYCO_IRKV|GLYCOPROTEIN virus (IRKV)

Query: 2 GVCFHPVFD 10
G CF P+ D
Sbjct: 176 GKCFPPISD 184




44|Sequence|216|225|HPVFDTKQIR

>sp|UDPE_NPVSL|ECDYSTEROID UDP-glucosyltransferase|Spodoptera littoralis nuclear polyhedrosis

Query: 1 HPVFDTKQ 8
HPVFDT +
Sbjct: 255 HPVFDTNR 262


>sp|EGT_NPVAC|ECDYSTEROID UDP-glucosyltransferase|Autographa californica nuclear polyhedrosis

Query: 1 HPVFDTKQ 8
HP+FD +
Sbjct: 246 HPIFDNNR 253


>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15

Query: 1 HPVFDTKQI 9
HP FD + +
Sbjct: 48 HPYFDVRSV 56


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 HPVFDT 6
HP++DT
Sbjct: 2606 HPIYDT 2611




45|Sequence|221|230|TKQIRNGVKS

>sp|POLN_DCVEB|REPLICASE polyprotein|Drosophila C virus (strain EB)

Query: 1 TKQIRNGVK 9
TKQI +G+K
Sbjct: 153 TKQISDGIK 161




46|Sequence|226|235|NGVKSIGEKT

>sp|CPRT_SBWMN|84 kDa readthrough protein|Soil-borne wheat mosaic virus (strain

Query: 1 NGVKSIGEKT 10
NGV +GE++
Sbjct: 52 NGVSKLGERS 61


>sp|CAPSD_HVAVE|MAJOR capsid protein|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 1 NGVKSIG 7
NGV+SIG
Sbjct: 332 NGVRSIG 338




47|Sequence|231|240|IGEKTEASLV

***** No hits found ******


48|Sequence|236|245|EASLVWFTPP

>sp|SPIKE_CVM4|SPIKE glycoprotein|Murine coronavirus (strain 4) (MHV-4)

Query: 3 SLVWFTPP 10
SL WF PP
Sbjct: 88 SLTWFKPP 95


>sp|SPIKE_CVMJH|SPIKE glycoprotein|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 SLVWFTPP 10
SL WF PP
Sbjct: 88 SLTWFKPP 95


>sp|SPIKE_CVMJC|SPIKE glycoprotein|Murine coronavirus (strain JHMV /

Query: 3 SLVWFTPP 10
SL WF PP
Sbjct: 88 SLTWFKPP 95


>sp|SPIKE_CVMA5|SPIKE glycoprotein|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 SLVWFTPP 10
SL WF PP
Sbjct: 88 SLSWFQPP 95


>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)

Query: 3 SLVWFTPP 10
SL WF PP
Sbjct: 88 SLNWFEPP 95


>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 STLWFKPP 94


>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 STLWFKPP 94


>sp|SPIKE_CVBF|SPIKE glycoprotein|Bovine coronavirus (strain F15) (BCoV)

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 STLWFKPP 94


>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 STLWFKPP 94


>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 STLWFKPP 94


>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 STLWFKPP 94


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 3 SLVWFTPP 10
S+ WF PP
Sbjct: 1173 SISWFVPP 1180


>sp|SPIKE_CVPIA|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 STLWFKPP 94


>sp|SPIKE_CVP67|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 STLWFKPP 94


>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 SRLWFKPP 94


>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 SRLWFKPP 94


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 SRLWFKPP 94


>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 SRLWFKPP 94


>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)

Query: 3 SLVWFTPP 10
S +WF PP
Sbjct: 87 SRLWFKPP 94


>sp|ICP4_PSHV1|MAJOR viral transcription factor ICP4|Psittacid herpesvirus 1 (isolate

Query: 1 EASLVWFTPP 10
+ASL FTPP
Sbjct: 109 DASLSLFTPP 118


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 3 SLVWFTPP 10
S +W+ PP
Sbjct: 86 STLWYKPP 93


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 3 SLVWFTPP 10
S +W+ PP
Sbjct: 86 STLWYKPP 93


>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate

Query: 6 WFTPP 10
WF PP
Sbjct: 591 WFLPP 595


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 3 SLVWFTPP 10
++ WF PP
Sbjct: 1185 AISWFIPP 1192


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 3 SLVWFTPP 10
++ WF PP
Sbjct: 1185 AISWFIPP 1192


>sp|VP2_NVN68|MINOR capsid protein VP2|Norovirus (strain Human/NoV/United

Query: 5 VWFTPP 10
VW TPP
Sbjct: 178 VWLTPP 183


>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain

Query: 2 ASLVWFTP 9
+SL W TP
Sbjct: 1904 SSLYWLTP 1911


>sp|POL1_BRSV|RNA1 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 2 ASLVWFTP 9
+SL W TP
Sbjct: 1902 SSLYWLTP 1909


>sp|VE2_PCPV1|REGULATORY protein E2|Pygmy chimpanzee papillomavirus type 1

Query: 5 VWFTPP 10
+W TPP
Sbjct: 101 MWLTPP 106


>sp|ENV_FIVU2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UK2)

Query: 1 EASLVWFTPP 10
+A +VW PP
Sbjct: 173 QAQVVWRLPP 182


>sp|ENV_FIVU1|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UT-113)

Query: 1 EASLVWFTPP 10
+A +VW PP
Sbjct: 173 DAQVVWRLPP 182


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 4 LVWFTP 9
+ WFTP
Sbjct: 651 MAWFTP 656


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 LVWFTP 9
+ WFTP
Sbjct: 647 MAWFTP 652


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 LVWFTP 9
+ WFTP
Sbjct: 647 MAWFTP 652


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 LVWFTP 9
+ WFTP
Sbjct: 648 MAWFTP 653


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 LVWFTP 9
+ WFTP
Sbjct: 647 MAWFTP 652


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 LVWFTP 9
+ WFTP
Sbjct: 647 MAWFTP 652


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 LVWFTP 9
+ WFTP
Sbjct: 647 MAWFTP 652


>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44

Query: 5 VWFTPP 10
+W TPP
Sbjct: 101 MWLTPP 106


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 LVWFTP 9
+ WFTP
Sbjct: 647 MAWFTP 652


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 LVWFTP 9
+ WFTP
Sbjct: 647 MAWFTP 652


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 LVWFTP 9
+ WFTP
Sbjct: 647 MAWFTP 652


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4 LVWFTP 9
+ WFTP
Sbjct: 641 MAWFTP 646


>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13

Query: 5 VWFTPP 10
+W TPP
Sbjct: 101 MWLTPP 106


>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11

Query: 5 VWFTPP 10
+W TPP
Sbjct: 101 MWLTPP 106


>sp|ENV_FIVWO|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate Wo)

Query: 1 EASLVWFTPP 10
+A +VW PP
Sbjct: 171 KAQVVWRLPP 180


>sp|ENV_FIVSD|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain San

Query: 2 ASLVWFTPP 10
A +VW PP
Sbjct: 174 AQIVWRLPP 182


>sp|ENV_FIVU8|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UK8)

Query: 1 EASLVWFTPP 10
+A +VW PP
Sbjct: 173 KAQVVWRLPP 182


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 3 SLVWFTP 9
SL WF P
Sbjct: 585 SLYWFAP 591




49|Sequence|241|250|WFTPPRTSNQ

>sp|PHOSP_CDVO|PHOSPHOPROTEIN distemper virus (strain Onderstepoort)

Query: 4 PPRTSNQ 10
PPRTSN+
Sbjct: 294 PPRTSNE 300


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1 WFTPPRTS 8
W PPR S
Sbjct: 1186 WIAPPRVS 1193


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1 WFTPPRTS 8
W PPR S
Sbjct: 1186 WIAPPRVS 1193


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 1 WFTPPRT 7
W TPP+T
Sbjct: 1673 WKTPPKT 1679


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 3 TPPRTSNQ 10
TPP TSN+
Sbjct: 1790 TPPGTSNE 1797


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 3 TPPRTSNQ 10
TPP TSN+
Sbjct: 1801 TPPGTSNE 1808


>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 WFTPPRTSN 9
WF PP S+
Sbjct: 90 WFKPPFLSD 98


>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 WFTPPRTSN 9
WF PP S+
Sbjct: 90 WFKPPFLSD 98


>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)

Query: 1 WFTPPRTSN 9
WF PP S+
Sbjct: 90 WFKPPFLSD 98


>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)

Query: 1 WFTPPRTSN 9
WF PP S+
Sbjct: 90 WFKPPFLSD 98


>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)

Query: 1 WFTPPRTSN 9
WF PP S+
Sbjct: 90 WFKPPFLSD 98


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 1 WFTPPRTSN 9
WF PP S+
Sbjct: 90 WFKPPFLSD 98


>sp|VE2_PCPV1|REGULATORY protein E2|Pygmy chimpanzee papillomavirus type 1

Query: 1 WFTPPR 6
W TPP+
Sbjct: 102 WLTPPK 107


>sp|TIPJ_BPS27|TIP attachment protein J|Escherichia phage SECphi27

Query: 1 WFTPPRTSNQ 10
W P+T+N+
Sbjct: 673 WLNTPQTANK 682


>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13

Query: 1 WFTPPR 6
W TPP+
Sbjct: 102 WLTPPK 107


>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11

Query: 1 WFTPPR 6
W TPP+
Sbjct: 102 WLTPPK 107




50|Sequence|246|255|RTSNQWLDFW

>sp|DPOL_BPR69|DNA-DIRECTED DNA polymerase|Escherichia phage RB69 (Bacteriophage RB69)

Query: 1 RTSNQWLDF 9
R +N W+DF
Sbjct: 642 RDTNHWVDF 650


>sp|YR592_MIMIV|PUTATIVE helicase R592|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 NQWLDF 9
NQW DF
Sbjct: 142 NQWADF 147


>sp|YL717_MIMIV|UNCHARACTERIZED protein L717|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 SNQWLDFW 10
+N+W ++W
Sbjct: 135 NNKWFNYW 142


>sp|HELI_NPVAC|DNA replication helicase|Autographa californica nuclear polyhedrosis

Query: 1 RTSNQWLDF 9
R N W DF
Sbjct: 430 RACNHWFDF 438


>sp|RDRP_BOTVX|RNA replication protein|Botrytis virus X (isolate Botrytis

Query: 1 RTSNQWLDF 9
+TSNQ+ DF
Sbjct: 1127 KTSNQFNDF 1135


>sp|PG162_VACCC|PROTEIN OPG162|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 RTSNQWLD 8
+T+N+WLD
Sbjct: 107 KTNNKWLD 114


>sp|PG162_VAR67|PROTEIN OPG162|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 RTSNQWLD 8
+T+N+WLD
Sbjct: 107 KTNNKWLD 114


>sp|GD_EHV1A|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain AB1)

Query: 6 WLDFW 10
WL FW
Sbjct: 253 WLKFW 257


>sp|SPIKE_CVCBG|SPIKE glycoprotein|Canine coronavirus (strain BGF10) (CCoV)

Query: 2 TSNQWLD 8
T+NQW D
Sbjct: 151 TANQWRD 157


>sp|GD_EHV1D|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Kentucky

Query: 6 WLDFW 10
WL FW
Sbjct: 303 WLKFW 307


>sp|GD_EHV1B|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Ab4p)

Query: 6 WLDFW 10
WL FW
Sbjct: 303 WLKFW 307




51|Sequence|251|260|WLDFWLRHRL

>sp|G1P_BPPF1|PUTATIVE Gene 1 protein|Pseudomonas phage Pf1 (Bacteriophage Pf1)

Query: 1 WLDFWLRHR 9
WLD W RHR
Sbjct: 124 WLDAWTRHR 132


>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 DFWLRH 8
DFWL H
Sbjct: 1480 DFWLTH 1485


>sp|YL043_MIMIV|UNCHARACTERIZED protein L43|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WLDFWLRHR 9
W+D W+R +
Sbjct: 59 WIDEWIRRK 67


>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)

Query: 1 WLDFWLR 7
W ++W+R
Sbjct: 252 WQEYWMR 258


>sp|GD_EHV1A|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain AB1)

Query: 1 WLDFWL 6
WL FW
Sbjct: 253 WLKFWF 258


>sp|DDA_BPT4|ATP-DEPENDENT DNA helicase dda|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 WLDFW 5
W DFW
Sbjct: 374 WSDFW 378


>sp|SRC_AVISS|TYROSINE-PROTEIN kinase transforming protein Src|Avian sarcoma virus (strain S1)

Query: 3 DFWLRHRL 10
D+WL H L
Sbjct: 117 DWWLAHSL 124


>sp|VG48_EHV2|TEGUMENT protein G48|Equine herpesvirus 2 (strain 86/87)

Query: 1 WLDFWLRH 8
WL F L+H
Sbjct: 217 WLHFILKH 224


>sp|GD_EHV1D|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Kentucky

Query: 1 WLDFWL 6
WL FW
Sbjct: 303 WLKFWF 308


>sp|GD_EHV1B|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Ab4p)

Query: 1 WLDFWL 6
WL FW
Sbjct: 303 WLKFWF 308


>sp|SRC_AVISR|TYROSINE-PROTEIN kinase transforming protein Src|Avian sarcoma virus (strain

Query: 3 DFWLRHRL 10
D+WL H L
Sbjct: 117 DWWLAHSL 124


>sp|SRC_AVIST|TYROSINE-PROTEIN kinase transforming protein Src|Avian sarcoma virus (strain S2)

Query: 3 DFWLRHRL 10
D+WL H L
Sbjct: 117 DWWLAHSL 124


>sp|SRC_RSVH1|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus (strain H-19)

Query: 3 DFWLRHRL 10
D+WL H L
Sbjct: 117 DWWLAHSL 124


>sp|SRC_RSVP|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus subgroup C

Query: 3 DFWLRHRL 10
D+WL H L
Sbjct: 117 DWWLAHSL 124


>sp|VP7_BRD|CORE protein VP7|Broadhaven virus (BRD)

Query: 4 FWLRHRL 10
+WL HRL
Sbjct: 339 WWLAHRL 345


>sp|SRC_AVIS2|TYROSINE-PROTEIN kinase transforming protein Src|Avian sarcoma virus (strain PR2257)

Query: 3 DFWLRHRL 10
D+WL H L
Sbjct: 117 DWWLAHSL 124


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 1 WLDFWLRHR 9
W +F LR+R
Sbjct: 201 WTEFTLRYR 209




52|Sequence|256|265|LRHRLQWWRK

>sp|Y05I_BPT4|UNCHARACTERIZED 21.1 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 RHRLQWWRK 10
+H L+W++K
Sbjct: 107 KHNLKWFKK 115


>sp|YR290_MIMIV|PUTATIVE ATP-dependent RNA helicase R290|Acanthamoeba polyphaga mimivirus

Query: 2 RHRLQWWRK 10
+H +WW++
Sbjct: 477 KHSSEWWKE 485


>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)

Query: 6 QWWR 9
QWWR
Sbjct: 1467 QWWR 1470


>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)

Query: 4 RLQWWR 9
RLQW+R
Sbjct: 66 RLQWFR 71


>sp|GD_EHV1K|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Kentucky

Query: 6 QWWR 9
QWWR
Sbjct: 30 QWWR 33


>sp|DPOL_PBCVN|DNA polymerase|Paramecium bursaria Chlorella virus NY2A

Query: 5 LQWWRK 10
LQW+RK
Sbjct: 342 LQWFRK 347


>sp|DPOL_PBCV1|DNA polymerase|Paramecium bursaria Chlorella virus 1

Query: 5 LQWWRK 10
LQW+RK
Sbjct: 342 LQWFRK 347


>sp|VU25_HHV6U|PROTEIN U25|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 RHRLQWWRK 10
RH +QW RK
Sbjct: 185 RHLIQWRRK 193


>sp|GD_EHV1D|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Kentucky

Query: 6 QWWR 9
QWWR
Sbjct: 30 QWWR 33


>sp|GD_EHV1B|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Ab4p)

Query: 6 QWWR 9
QWWR
Sbjct: 30 QWWR 33


>sp|CAPSD_PCV2|CAPSID protein|Porcine circovirus 2 (PCV2)

Query: 2 RHRLQWWRK 10
RHR +W RK
Sbjct: 33 RHRYRWRRK 41


>sp|RDRP_PCV87|REPLICASE large subunit|Peanut clump virus (isolate 87/TGTA2)

Query: 5 LQWWRK 10
L+WW K
Sbjct: 1297 LRWWEK 1302


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4 RLQWWRK 10
RL WW +
Sbjct: 847 RLMWWNQ 853


>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human

Query: 1 LRHRLQWWR 9
L ++LQW++
Sbjct: 482 LEYKLQWYQ 490


>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain

Query: 5 LQWWRK 10
L+WW++
Sbjct: 1472 LRWWKR 1477


>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 LRHRLQWWRK 10
+RH L +WR+
Sbjct: 282 VRHPLLFWRR 291


>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 LRHRLQWWRK 10
+RH L +WR+
Sbjct: 282 VRHPLLFWRR 291


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 5 LQWWRK 10
L WW K
Sbjct: 947 LSWWEK 952


>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 RHRLQWWR 9
R+R++WW+
Sbjct: 10 RNRIRWWQ 17




53|Sequence|261|270|QWWRKFAMSP

>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 QWWRKFAMSP 10
++WR+FA SP
Sbjct: 2138 EYWREFASSP 2147


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 QWWRKFAMSP 10
++WR+FA SP
Sbjct: 2139 EYWREFASSP 2148


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 QWWRKFAMSP 10
++WR+FA SP
Sbjct: 2138 EYWREFASSP 2147


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 QWWRKFAMSP 10
++W++FA SP
Sbjct: 2099 EYWKEFAASP 2108


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1 QWWRKFAMSP 10
++W +FA SP
Sbjct: 2099 EYWEEFAASP 2108


>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain

Query: 2 WWRKFAMSP 10
WW K + SP
Sbjct: 208 WWEKISFSP 216


>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)

Query: 3 WRKFAMSP 10
WR+ A+SP
Sbjct: 791 WRRVAVSP 798


>sp|RDRP_TCV|RNA-DIRECTED RNA polymerase|Turnip crinkle virus (TCV)

Query: 1 QWWRKFAMSP 10
+WW AM P
Sbjct: 215 KWWVNLAMHP 224


>sp|LT_POVLY|LARGE T antigen|B-lymphotropic polyomavirus (LPV)

Query: 1 QWWRKF 6
+WWR+F
Sbjct: 117 KWWREF 122


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 2 WWRKFA 7
WW KF+
Sbjct: 949 WWEKFS 954


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1 QWWRKFAMSP 10
++W +FA P
Sbjct: 2138 EYWEEFARKP 2147


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 1 QWWRKFAMSP 10
++W +FA P
Sbjct: 2140 EYWEEFARKP 2149


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1 QWWRKFAMSP 10
++W +FA P
Sbjct: 2062 EYWEEFAKKP 2071


>sp|POL1_BAMMN|GENOME polyprotein 1|Barley mild mosaic virus (strain

Query: 5 KFAMSP 10
KFAMSP
Sbjct: 1858 KFAMSP 1863


>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 WWRKFAMSP 10
+WR+ A+SP
Sbjct: 288 FWRRVALSP 296


>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 WWRKFAMSP 10
+WR+ A+SP
Sbjct: 288 FWRRVALSP 296


>sp|VF357_IIV6|UNCHARACTERIZED protein 357R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 QWWRKFA 7
+WW KF+
Sbjct: 41 KWWLKFS 47


>sp|044L_IIV3|PUTATIVE serine/threonine-protein kinase 040L|Invertebrate iridescent

Query: 1 QWWRKFA 7
+WW KF
Sbjct: 76 EWWSKFG 82




54|Sequence|266|275|FAMSPSNFSS

>sp|Y021_OSHVF|UNCHARACTERIZED protein ORF21|Ostreid herpesvirus 1 (isolate France)

Query: 1 FAMSPSNF 8
++MSP NF
Sbjct: 869 YSMSPDNF 876


>sp|NCAP_TACVF|NUCLEOPROTEIN virus (strain Franze-Fernandez) (TCRV)

Query: 3 MSPSNFSS 10
+SP NFSS
Sbjct: 265 VSPDNFSS 272


>sp|LEF3_NPVOP|LATE expression factor 3|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 FAMSPSNFSS 10
F SP NF+S
Sbjct: 178 FVKSPDNFNS 187




55|Sequence|271|280|SNFSSSDCQD

>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1 SNFSSSDCQD 10
SNF+S+ C +
Sbjct: 444 SNFNSTGCSE 453


>sp|UNG_ALHV1|URACIL-DNA glycosylase|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 SNFSSSDCQ 9
+N+SSS C+
Sbjct: 217 NNYSSSQCK 225


>sp|NSS_BUNSH|NON-STRUCTURAL protein NS-S|Bunyavirus snowshoe hare

Query: 5 SSDCQD 10
S+DCQD
Sbjct: 86 STDCQD 91


>sp|POL2_CPSMV|RNA2 polyprotein|Cowpea severe mosaic virus (strain

Query: 1 SNFSSSDC 8
++F+SSDC
Sbjct: 226 NSFASSDC 233


>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)

Query: 2 NFSSSDC 8
NFS+S+C
Sbjct: 107 NFSNSNC 113


>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)

Query: 2 NFSSSDC 8
NFS+S+C
Sbjct: 107 NFSNSNC 113




56|Sequence|276|285|SDCQDEEGRK

>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 2 DCQDEEGRK 10
DCQDE+ R+
Sbjct: 2366 DCQDEDRRR 2374


>sp|POL_MMTVB|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 2 DCQDEEGRK 10
DC+DE+G K
Sbjct: 539 DCKDEKGSK 547


>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1

Query: 4 QDEEGR 9
QDEEGR
Sbjct: 234 QDEEGR 239


>sp|PRO_MMTVB|GAG-PRO polyprotein|Mouse mammary tumor virus (strain

Query: 2 DCQDEEGRK 10
DC+DE+G K
Sbjct: 539 DCKDEKGSK 547


>sp|GAG_MMTVB|GAG polyprotein|Mouse mammary tumor virus (strain

Query: 2 DCQDEEGRK 10
DC+DE+G K
Sbjct: 539 DCKDEKGSK 547


>sp|POL_MMTVC|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 2 DCQDEEGRK 10
DC++E+G K
Sbjct: 539 DCKEEKGSK 547


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 1 SDCQDE 6
SDC+DE
Sbjct: 45 SDCRDE 50


>sp|VE4_HPV5B|PROTEIN E4|Human papillomavirus type 5b

Query: 1 SDCQDEEGR 9
DC DEEG
Sbjct: 180 GDCGDEEGH 188




57|Sequence|281|290|EEGRKGNKLY

>sp|PRIM_ELHVK|DNA primase|Elephantid herpesvirus 1 (isolate Asian

Query: 4 RKGNKLY 10
RKGNK++
Sbjct: 469 RKGNKMF 475


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 4 RKGNKLY 10
+KGN+LY
Sbjct: 1618 KKGNELY 1624




58|Sequence|286|295|GNKLYYNFPW

>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1

Query: 4 LYYNFPW 10
LY NFPW
Sbjct: 293 LYVNFPW 299


>sp|VG49_BPML5|GENE 49 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 GNKLYYNFPW 10
GN+L Y+ PW
Sbjct: 3 GNQLSYDDPW 12


>sp|YL116_MIMIV|UNCHARACTERIZED protein L116|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 NKLYYNFP 9
NKL YNFP
Sbjct: 83 NKLLYNFP 90


>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4 LYYNFPW 10
+Y NFPW
Sbjct: 293 IYLNFPW 299


>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)

Query: 4 LYYNFPW 10
+Y NFPW
Sbjct: 293 IYLNFPW 299


>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 LYYNFPW 10
+Y NFPW
Sbjct: 293 IYLNFPW 299


>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)

Query: 4 LYYNFPW 10
+Y NFPW
Sbjct: 293 IYLNFPW 299


>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus

Query: 4 LYYNFPW 10
+Y NFPW
Sbjct: 293 IYLNFPW 299


>sp|PG085_VACCW|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Western Reserve)

Query: 4 LYYNFPW 10
+Y NFPW
Sbjct: 293 IYLNFPW 299


>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)

Query: 4 LYYNFPW 10
+Y NFPW
Sbjct: 293 IYLNFPW 299


>sp|YR106_MIMIV|UNCHARACTERIZED protein R106|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GNKLYYNFPW 10
GN+L Y+FP+
Sbjct: 249 GNRLLYHFPF 258


>sp|PG085_FOWPN|PROBABLE metalloendopeptidase G1-type|Fowlpox virus (strain NVSL) (FPV)

Query: 4 LYYNFPW 10
LY NFPW
Sbjct: 295 LYINFPW 301


>sp|Y268_SIRV1|UNCHARACTERIZED protein 268|Sulfolobus islandicus rod-shaped virus 1

Query: 1 GNKLYYNFP 9
GNKLY +FP
Sbjct: 225 GNKLYNSFP 233


>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P

Query: 6 YNFPW 10
YN+PW
Sbjct: 401 YNWPW 405


>sp|OE66_NPVLD|OCCLUSION-DERIVED virus envelope protein E66|Lymantria dispar multicapsid nuclear

Query: 3 KLYYNFPW 10
+LYYN P+
Sbjct: 113 ELYYNLPF 120


>sp|P2_RGDV|MINOR outer capsid protein P2|Rice gall dwarf virus (RGDV)

Query: 1 GNKLYYN 7
GN+++YN
Sbjct: 704 GNRIFYN 710


>sp|VE2_BPV4|REGULATORY protein E2|Bos taurus papillomavirus 4 (Bovine

Query: 1 GNKLYY-NF 8
GNK+YY NF
Sbjct: 91 GNKIYYVNF 99


>sp|RPB1_ASFWA|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (isolate

Query: 3 KLYYNF 8
+LYYNF
Sbjct: 265 QLYYNF 270


>sp|RPB1_ASFP4|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (isolate

Query: 3 KLYYNF 8
+LYYNF
Sbjct: 265 QLYYNF 270


>sp|RPB1_ASFM2|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (isolate

Query: 3 KLYYNF 8
+LYYNF
Sbjct: 265 QLYYNF 270


>sp|RPB1_ASFK5|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (isolate

Query: 3 KLYYNF 8
+LYYNF
Sbjct: 265 QLYYNF 270


>sp|RPB1_ASFB7|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (strain

Query: 3 KLYYNF 8
+LYYNF
Sbjct: 265 QLYYNF 270


>sp|L_MILVL|RNA-DIRECTED RNA polymerase L|Mirafiori lettuce virus (isolate

Query: 3 KLYYNF 8
KLYYN+
Sbjct: 1390 KLYYNY 1395


>sp|AC53_NPVAC|PROTEIN AC53|Autographa californica nuclear polyhedrosis virus

Query: 3 KLYYNFP 9
K Y+NFP
Sbjct: 79 KYYFNFP 85


>sp|BKRF4_EBVB9|TEGUMENT protein BKRF4|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 6 YNFPW 10
YN+PW
Sbjct: 212 YNWPW 216


>sp|BKRF4_EBVA8|TEGUMENT protein BKRF4|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 6 YNFPW 10
YN+PW
Sbjct: 212 YNWPW 216


>sp|BKRF4_EBVG|TEGUMENT protein BKRF4|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 6 YNFPW 10
YN+PW
Sbjct: 212 YNWPW 216


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 1 GNKLYYNFPW 10
GNK + F W
Sbjct: 1159 GNKYFIEFDW 1168


>sp|Y007_SIFVH|PUTATIVE helicase 7|Sulfolobus islandicus filamentous virus (isolate

Query: 1 GNKLYY 6
GNKLY+
Sbjct: 195 GNKLYF 200


>sp|DPOL_POV01|DNA polymerase|Pyramimonas orientalis virus (PoV01)

Query: 2 NKLYYNF 8
NKL YNF
Sbjct: 87 NKLPYNF 93


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1 GNKLYYN 7
G K+YYN
Sbjct: 1824 GRKIYYN 1830


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1 GNKLYYN 7
G K+YYN
Sbjct: 1824 GRKIYYN 1830


>sp|VP74_NPVOP|PROTEIN p74|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 NKLYYNFPW 10
+K+Y+N P+
Sbjct: 146 SKMYFNSPY 154


>sp|L_SV41|RNA-DIRECTED RNA polymerase L|Simian virus 41 (SV41)

Query: 1 GNKLYYN 7
G K+YYN
Sbjct: 1834 GQKVYYN 1840


>sp|YR503_MIMIV|UNCHARACTERIZED protein R503|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 NKLYYNF 8
NK+YYN
Sbjct: 214 NKIYYNL 220


>sp|VP74_NPVCF|PROTEIN p74|Choristoneura fumiferana nuclear polyhedrosis virus

Query: 2 NKLYYNFPW 10
+K+Y+N P+
Sbjct: 146 SKMYFNSPY 154


>sp|PIF0_NPVAC|PER os infectivity factor 0|Autographa californica nuclear polyhedrosis

Query: 2 NKLYYNFPW 10
+K+Y+N P+
Sbjct: 146 SKMYFNSPY 154


>sp|ME53_NPVOP|EARLY 53 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 NKLYYNFP 9
NK+YY+ P
Sbjct: 381 NKMYYSNP 388


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 GNKLYYNFPW 10
G K YNF W
Sbjct: 2463 GFKRTYNFLW 2472


>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)

Query: 3 KLYYNFP 9
+LYYN P
Sbjct: 428 QLYYNLP 434


>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 KLYYNFP 9
+LYYN P
Sbjct: 428 QLYYNLP 434


>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 3 KLYYNFP 9
+LYYN P
Sbjct: 428 QLYYNLP 434




59|Sequence|291|300|YNFPWGKELI

>sp|CAPSD_HCYV5|CAPSID protein|Human associated cyclovirus 1 (isolate

Query: 3 FPWGKEL 9
FPW KEL
Sbjct: 106 FPWHKEL 112


>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)

Query: 1 YNFPWGKELI 10
Y WGKE++
Sbjct: 388 YMLEWGKEMV 397


>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)

Query: 1 YNFPWGKELI 10
Y WGKE++
Sbjct: 388 YMLEWGKEMV 397


>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)

Query: 1 YNFPWGKELI 10
Y WGKE++
Sbjct: 388 YMLEWGKEMV 397


>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)

Query: 1 YNFPWGKELI 10
Y WGKE++
Sbjct: 345 YMLEWGKEMV 354


>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 2 NFPWGKELI 10
N PW K+L+
Sbjct: 937 NVPWTKKLV 945


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 2 NFPWGKELI 10
N PW K+L+
Sbjct: 936 NVPWTKKLV 944


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 NFPWGKELI 10
N PW K+L+
Sbjct: 936 NVPWTKKLV 944


>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 5 WGKELI 10
WGKELI
Sbjct: 1077 WGKELI 1082


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 NFPWGKELI 10
N PW K+L+
Sbjct: 937 NVPWTKKLV 945


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 2 NFPWGKELI 10
N PW K+L+
Sbjct: 937 NVPWTKKLV 945


>sp|DPOL_VACCW|DNA polymerase|Vaccinia virus (strain Western Reserve)

Query: 2 NFPWGKELI 10
N PW K+L+
Sbjct: 937 NVPWTKKLV 945


>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 PWGKELI 10
PW KEL+
Sbjct: 263 PWKKELV 269


>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)

Query: 2 NFPWGKELI 10
N+ WGK +I
Sbjct: 1152 NWTWGKNII 1160


>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P

Query: 1 YNFPW 5
YN+PW
Sbjct: 401 YNWPW 405


>sp|L_LBVAV|RNA-DIRECTED RNA polymerase L|Lettuce big-vein associated virus (isolate

Query: 1 YNFPWGKELI 10
YNF GKE++
Sbjct: 189 YNFIVGKEVV 198


>sp|VG45_EHV2|UNCHARACTERIZED gene 45 protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 YNFPW 5
YN+PW
Sbjct: 316 YNWPW 320


>sp|BKRF4_EBVB9|TEGUMENT protein BKRF4|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 YNFPW 5
YN+PW
Sbjct: 212 YNWPW 216


>sp|BKRF4_EBVA8|TEGUMENT protein BKRF4|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 YNFPW 5
YN+PW
Sbjct: 212 YNWPW 216


>sp|BKRF4_EBVG|TEGUMENT protein BKRF4|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 YNFPW 5
YN+PW
Sbjct: 212 YNWPW 216


>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)

Query: 1 YNFPWGKELI 10
+ WGKE++
Sbjct: 388 FMLEWGKEMV 397


>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)

Query: 1 YNFPWGKELI 10
+ WGKE++
Sbjct: 388 FMLEWGKEMV 397


>sp|YR838_MIMIV|PUTATIVE ankyrin repeat protein R838|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 NFPWGKELI 10
NFP GK ++
Sbjct: 93 NFPCGKSMM 101


>sp|YR304_MIMIV|UNCHARACTERIZED protein R304|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YNFPWGKEL 9
YNFP +EL
Sbjct: 114 YNFPSVREL 122


>sp|GN_ELHVK|ENVELOPE glycoprotein N|Elephantid herpesvirus 1 (isolate Asian

Query: 2 NFPWGKEL 9
N PW K L
Sbjct: 44 NAPWSKSL 51


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4 PWGKE 8
PWG+E
Sbjct: 1600 PWGRE 1604


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4 PWGKE 8
PWG+E
Sbjct: 1600 PWGRE 1604


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4 PWGKE 8
PWG+E
Sbjct: 1600 PWGRE 1604


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4 PWGKE 8
PWG+E
Sbjct: 1600 PWGRE 1604


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4 PWGKE 8
PWG+E
Sbjct: 1600 PWGRE 1604


>sp|DGTPH_BPSHA|DATP/DGTP diphosphohydrolase|Acinetobacter phage SH-Ab 15497

Query: 1 YNFPWGK 7
YN PW +
Sbjct: 373 YNVPWSE 379


>sp|POL1_BBWV2|RNA1 polyprotein|Broad bean wilt virus 2

Query: 3 FPWGKE 8
F WGKE
Sbjct: 1025 FVWGKE 1030


>sp|OE66_NPVLS|OCCLUSION-DERIVED virus envelope protein E66|Leucania separata nucleopolyhedrovirus

Query: 1 YNFPWGKELI 10
YNF +G+E +
Sbjct: 242 YNFLFGEETV 251


>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)

Query: 1 YNFPWGKE 8
YN WG++
Sbjct: 199 YNCTWGRD 206


>sp|GLYC_IPPYV|PRE-GLYCOPROTEIN polyprotein GP complex|Ippy mammarenavirus (isolate Rat/Central

Query: 1 YNFPWGKEL 9
Y F WG+ +
Sbjct: 190 YRFHWGRNI 198


>sp|YR656_MIMIV|UNCHARACTERIZED protein R656|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YNFPWGKELI 10
YN P+G LI
Sbjct: 367 YNVPFGPGLI 376


>sp|PG085_FOWPN|PROBABLE metalloendopeptidase G1-type|Fowlpox virus (strain NVSL) (FPV)

Query: 2 NFPWGKELI 10
NFPW K I
Sbjct: 298 NFPWLKNDI 306




60|Sequence|296|305|GKELIETLWN

>sp|KITH_AHV1W|THYMIDINE kinase|Alcelaphine herpesvirus 1 (strain WC11)

Query: 2 KELIETLWN 10
+E+IE LWN
Sbjct: 639 QEIIEALWN 647


>sp|GH_ALHV1|ENVELOPE glycoprotein H|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 KELIETLWN 10
+E+IE LWN
Sbjct: 70 QEIIEALWN 78


>sp|H962R_ASFK5|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 1 GKELIETLWN 10
GKE +E LWN
Sbjct: 354 GKEKLEKLWN 363


>sp|H962R_ASFWA|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 1 GKELIETLWN 10
GKE +E LWN
Sbjct: 354 GKEKLEQLWN 363


>sp|H962R_ASFP4|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 1 GKELIETLWN 10
GKE +E LWN
Sbjct: 354 GKEKLEQLWN 363


>sp|H962R_ASFM2|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 1 GKELIETLWN 10
GKE +E LWN
Sbjct: 354 GKEKLEKLWN 363


>sp|H962R_ASFB7|PUTATIVE primase C962R|African swine fever virus (strain

Query: 1 GKELIETLWN 10
GKE +E LWN
Sbjct: 354 GKEKLEKLWN 363


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 3 ELIETLWN 10
EL+ETLW+
Sbjct: 942 ELLETLWS 949


>sp|YR600_MIMIV|PUTATIVE ankyrin repeat protein R600|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GKELIETLWN 10
G E+IETL N
Sbjct: 254 GSEIIETLNN 263


>sp|Y16M_BPT4|UNCHARACTERIZED 4.3 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 KELIETLWN 10
K ++ET+WN
Sbjct: 29 KSVVETIWN 37


>sp|TPRT_ASFB7|TRANS-PRENYLTRANSFERASE swine fever virus (strain

Query: 1 GKELIETLWN 10
GK++ ++WN
Sbjct: 296 GKKIFTSIWN 305


>sp|REP_BPM13|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage M13 (Bacteriophage M13)

Query: 1 GKELIETLWN 10
GK+LI LW+
Sbjct: 276 GKDLIFDLWS 285


>sp|REP_BPFD|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage fd (Bacteriophage fd)

Query: 1 GKELIETLWN 10
GK+LI LW+
Sbjct: 276 GKDLIFDLWS 285


>sp|REP_BPF1|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage f1 (Bacteriophage f1)

Query: 1 GKELIETLWN 10
GK+LI LW+
Sbjct: 276 GKDLIFDLWS 285


>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus

Query: 1 GKELIETLWN 10
GK++I+TL N
Sbjct: 196 GKKVIQTLLN 205


>sp|TMP_BPPCD|PROBABLE tape measure protein|Clostridium phage phiCD119 (strain Clostridium

Query: 1 GKELIETLWN 10
GK +++ LWN
Sbjct: 780 GKNIVKGLWN 789


>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate

Query: 1 GKELIETLWN 10
GK++I+TL N
Sbjct: 196 GKKVIQTLLN 205


>sp|ETF1_VACCW|EARLY transcription factor 70 kDa|Vaccinia virus (strain Western Reserve)

Query: 1 GKELIETLWN 10
GK++I+TL N
Sbjct: 196 GKKVIQTLLN 205


>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)

Query: 1 GKELIETLWN 10
GK++I+TL N
Sbjct: 196 GKKVIQTLLN 205


>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)

Query: 1 GKELIETLWN 10
GK++I+TL N
Sbjct: 196 GKKVIQTLLN 205


>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 GKELIETLWN 10
GK++I+TL N
Sbjct: 196 GKKVIQTLLN 205


>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)

Query: 1 GKELIETLWN 10
GK++I+TL N
Sbjct: 196 GKKVIQTLLN 205


>sp|ACPY1_BPGO7|ANTI-PYCSAR protein Apyc1|Bacillus phage vB_BveM-Goe7

Query: 4 LIETLWN 10
L+E LWN
Sbjct: 97 LVEPLWN 103


>sp|ACPY1_BPGO3|ANTI-PYCSAR protein Apyc1|Bacillus phage vB_BsuM-Goe3

Query: 4 LIETLWN 10
L+E LWN
Sbjct: 97 LVEPLWN 103


>sp|TPRT_ASFWA|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 1 GKELIETLWN 10
GK++ ++WN
Sbjct: 296 GKKIYTSIWN 305


>sp|TPRT_ASFP4|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 1 GKELIETLWN 10
GK++ ++WN
Sbjct: 296 GKKIYTSIWN 305


>sp|TPRT_ASFM2|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 1 GKELIETLWN 10
GK++ ++WN
Sbjct: 296 GKKIYTSIWN 305


>sp|VPX_SIVV1|PROTEIN Vpx|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 GKELIETLWN 10
G+EL+ +WN
Sbjct: 45 GRELLYQVWN 54


>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain

Query: 3 ELIETLWN 10
EL++ +WN
Sbjct: 962 ELVKLMWN 969


>sp|VPX_SIVVT|PROTEIN Vpx|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 GKELIETLWN 10
G+EL+ +WN
Sbjct: 45 GRELLFQVWN 54


>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1 GKELIETLWN 10
G E +++LWN
Sbjct: 71 GSEDLKSLWN 80


>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 GKELIETLWN 10
G+E ++ LWN
Sbjct: 778 GREALKYLWN 787




61|Sequence|301|310|ETLWNLGDHE

>sp|GP11_BPMU|UNCHARACTERIZED protein gp11|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 TLWNLGDH 9
++WN+ DH
Sbjct: 149 SVWNITDH 156


>sp|POL_FLV|GAG-POL polyprotein|Feline leukemia virus

Query: 2 TLWNLGDHE 10
TL NLGD E
Sbjct: 500 TLLNLGDQE 508


>sp|VF022_IIV6|PUTATIVE helicase 022L|Invertebrate iridescent virus 6 (IIV-6)

Query: 4 WNLGDHE 10
W LG HE
Sbjct: 585 WRLGSHE 591


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 4 WNLGDH 9
WN+G H
Sbjct: 521 WNIGQH 526


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)

Query: 4 WNLGDH 9
WN+G H
Sbjct: 521 WNIGQH 526


>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 4 WNLGDHE 10
W L DHE
Sbjct: 72 WTLPDHE 78


>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 WNLGDHE 10
W L DHE
Sbjct: 72 WTLPDHE 78


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 1 ETLWNL 6
+TLWNL
Sbjct: 286 DTLWNL 291


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 1 ETLWNL 6
+TLWNL
Sbjct: 286 DTLWNL 291


>sp|PKG1_ADEM1|PACKAGING protein 1|Murine adenovirus A serotype 1

Query: 1 ETLWNLGDHE 10
E+ NLG+HE
Sbjct: 14 ESKENLGEHE 23


>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 LWNLGDH 9
LW LGD+
Sbjct: 147 LWYLGDY 153


>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 3 LWNLGDH 9
LW LGD+
Sbjct: 147 LWYLGDY 153


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 TLWNLGD 8
T W+LGD
Sbjct: 4542 TQWSLGD 4548


>sp|V240_FOWPN|PUTATIVE ankyrin repeat protein FPV240|Fowlpox virus (strain NVSL) (FPV)

Query: 1 ETLWNLGDHE 10
ET WN HE
Sbjct: 381 ETKWNWLPHE 390


>sp|DPO12_BPK64|DEPOLYMERASE, capsule KN4-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 1 ETLWNLGDHE 10
ET+W L +E
Sbjct: 53 ETIWKLNGNE 62


>sp|US13_HCMVM|MEMBRANE protein US13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 TLWNLGDH 9
TLW +GD
Sbjct: 165 TLWVIGDQ 172


>sp|US13_HCMVA|UNCHARACTERIZED protein HVLF5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 TLWNLGDH 9
TLW +GD
Sbjct: 165 TLWVIGDQ 172




62|Sequence|306|315|LGDHELLHMY

>sp|RDRP_ACLSA|RNA-DIRECTED RNA polymerase|Apple chlorotic leaf spot virus

Query: 1 LGDHELLHMY 10
LG H L H+Y
Sbjct: 259 LGSHHLFHIY 268


>sp|RDRP_ACLSP|RNA-DIRECTED RNA polymerase|Apple chlorotic leaf spot virus

Query: 1 LGDHELLHMY 10
LG H L H+Y
Sbjct: 259 LGSHHLFHIY 268


>sp|SPIKE_IBVD2|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 3 DHELLHMY 10
D ELLH Y
Sbjct: 648 DMELLHFY 655


>sp|POXIN_NPVBM|POXIN mori nuclear polyhedrosis virus

Query: 2 GDHELLHM 9
GD+E++H+
Sbjct: 218 GDYEIMHL 225


>sp|POXIN_NPVAC|POXIN californica nuclear polyhedrosis virus

Query: 2 GDHELLHM 9
GD+E++H+
Sbjct: 218 GDYEIMHL 225


>sp|EA47_LAMBD|PROTEIN ea47|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 LGDHELLH 8
L D+ELLH
Sbjct: 157 LKDYELLH 164


>sp|RDRP_PRV|RNA-DIRECTED RNA polymerase|Pieris rapae virus

Query: 4 HELLHMY 10
H++LH+Y
Sbjct: 49 HDVLHLY 55


>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 LGDHELL 7
L DHELL
Sbjct: 95 LNDHELL 101


>sp|VP30_EBORE|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 LGDHELL 7
L DHELL
Sbjct: 95 LNDHELL 101


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1 LGDHELLHMY 10
+GDH LL ++
Sbjct: 494 VGDHSLLSIH 503


>sp|TNPA_BPMU|DDE-RECOMBINASE A|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 GDHELLHM 9
G+H L+H+
Sbjct: 242 GEHALMHL 249


>sp|CAPSD_BPSPP|MAJOR capsid protein|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 1 LGDHELL 7
LGDHE L
Sbjct: 170 LGDHESL 176


>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)

Query: 3 DHELLHMY 10
DH LL MY
Sbjct: 1419 DHYLLSMY 1426


>sp|RDRP_LDCPR|RNA-DIRECTED RNA polymerase VP2|Lymantria dispar cypovirus 1 (isolate

Query: 3 DHELLHMY 10
D ELLH Y
Sbjct: 893 DDELLHEY 900


>sp|AC53_NPVAC|PROTEIN AC53|Autographa californica nuclear polyhedrosis virus

Query: 1 LGDHELLHMY 10
+GDHE+ +Y
Sbjct: 103 IGDHEIDRVY 112


>sp|YR398_MIMIV|UNCHARACTERIZED protein R398|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LGDHELLH 8
LG+HEL++
Sbjct: 22 LGNHELMN 29




63|Sequence|311|320|LLHMYPGNVS

>sp|UB222_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus

Query: 2 LHMYPGNVS 10
LH YPG V+
Sbjct: 623 LHAYPGAVT 631


>sp|Y066_SIFVH|UNCHARACTERIZED protein 66|Sulfolobus islandicus filamentous virus (isolate

Query: 1 LLHMYPGNVS 10
LL +YPGN++
Sbjct: 148 LLEVYPGNLN 157


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 1 LLHMYPG 7
L H+YPG
Sbjct: 372 LFHLYPG 378


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1 LLHMYPGNVS 10
LLH+ PG++S
Sbjct: 2027 LLHLPPGSLS 2036


>sp|VG59_SHV21|GENE 59 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 HMYPGNVS 10
HM P NVS
Sbjct: 76 HMMPENVS 83


>sp|GP_TSWVR|ENVELOPMENT polyprotein|Tomato spotted wilt virus (strain

Query: 3 HMYPGNVS 10
H+Y GN++
Sbjct: 811 HIYSGNIA 818


>sp|GP_TSWVD|ENVELOPMENT polyprotein|Tomato spotted wilt virus (isolate

Query: 3 HMYPGNVS 10
H+Y GN++
Sbjct: 811 HIYSGNIA 818


>sp|GP_TSWV1|ENVELOPMENT polyprotein|Tomato spotted wilt virus (strain

Query: 3 HMYPGNVS 10
H+Y GN++
Sbjct: 811 HIYSGNIA 818


>sp|GP_TSWV|ENVELOPMENT polyprotein|Tomato spotted wilt virus (TSWV)

Query: 3 HMYPGNVS 10
H+Y GN++
Sbjct: 811 HIYSGNIA 818


>sp|PORTL_BPP22|PORTAL protein|Salmonella phage P22 (Bacteriophage P22)

Query: 3 HMYPGN 8
HMY GN
Sbjct: 361 HMYDGN 366


>sp|RP147_VACCW|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Western Reserve)

Query: 2 LHMYPGNV 9
+H YP N+
Sbjct: 182 IHQYPANL 189


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 LHMYPGNV 9
+H YP N+
Sbjct: 182 IHQYPANL 189


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2 LHMYPGNV 9
+H YP N+
Sbjct: 182 IHQYPANL 189


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 2 LHMYPGNV 9
+H YP N+
Sbjct: 182 IHQYPANL 189


>sp|YL414_MIMIV|PUTATIVE F-box and FNIP repeat-containing|Acanthamoeba polyphaga mimivirus

Query: 3 HMYPGNV 9
H+YPG++
Sbjct: 264 HIYPGDI 270


>sp|GP_INSV|ENVELOPMENT polyprotein|Impatiens necrotic spot virus (INSV)

Query: 3 HMYPGNVS 10
H+Y GN++
Sbjct: 788 HVYAGNIA 795


>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)

Query: 4 MYPGNVS 10
+YPG+VS
Sbjct: 308 LYPGHVS 314


>sp|IR02_HCMVA|UNCHARACTERIZED protein IRL2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 LLHMYPGNVS 10
LLH YP N S
Sbjct: 22 LLHRYPINPS 31




64|Sequence|316|325|PGNVSKLHGR

>sp|POLN_CRPVC|REPLICASE polyprotein|Cricket paralysis virus (isolate

Query: 1 PGNVSKLHG 9
PGNVS+ HG
Sbjct: 1183 PGNVSECHG 1191


>sp|TPRT_ASFM2|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 2 GNVSKLHGR 10
GN +K+HG+
Sbjct: 268 GNYAKIHGK 276


>sp|GB_PSHV1|ENVELOPE glycoprotein B|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 PGNVSKLH 8
P N+S+LH
Sbjct: 367 PFNISRLH 374


>sp|GB_ILTVT|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain Thorne

Query: 1 PGNVSKLH 8
P N+S+LH
Sbjct: 358 PFNISRLH 365


>sp|GB_ILTV6|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain 632)

Query: 1 PGNVSKLH 8
P N+S+LH
Sbjct: 348 PFNISRLH 355


>sp|GB_ILTVS|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain SA-2)

Query: 1 PGNVSKLH 8
P N+S+LH
Sbjct: 358 PFNISRLH 365


>sp|MCEL_RFVKA|MRNA-CAPPING enzyme catalytic subunit|Rabbit fibroma virus (strain Kasza)

Query: 3 NVSKLHG 9
N+SK+HG
Sbjct: 78 NLSKIHG 84


>sp|096R_FRG3G|UNCHARACTERIZED protein 096R|Frog virus 3 (isolate Goorha)

Query: 2 GNVSKLH 8
GNVS LH
Sbjct: 80 GNVSTLH 86


>sp|GPG_BPMU|PUTATIVE capsid assembly protein G|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 PGNVSKLHG 9
PG++ LHG
Sbjct: 76 PGSILTLHG 84


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 NVSKLH 8
NVSKLH
Sbjct: 2367 NVSKLH 2372


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 NVSKLH 8
NVSKLH
Sbjct: 2367 NVSKLH 2372




65|Sequence|321|330|KLHGRDGRKN

>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2 LHGRDGRK 9
LHG+ GR+
Sbjct: 1496 LHGKSGRR 1503


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 KLHGRDGR 8
KLHGR+ R
Sbjct: 773 KLHGREKR 780


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 KLHGRDGR 8
KLHGR+ R
Sbjct: 773 KLHGREKR 780


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1 KLHGRDGR 8
KLH +DGR
Sbjct: 3237 KLHLKDGR 3244


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 1 KLHGRDGR 8
KLH +DGR
Sbjct: 3237 KLHLKDGR 3244


>sp|FIB37_BPAR1|LONG tail fiber protein Gp37|Escherichia phage AR1 (Bacteriophage AR1)

Query: 2 LHGRDGRKN 10
+HG DGR N
Sbjct: 925 VHGGDGRIN 933




66|Sequence|326|335|DGRKNVVPCV

>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1 DGRKNVVPC 9
DGRK VVPC
Sbjct: 3231 DGRKVVVPC 3239


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1 DGRKNVVPC 9
DGRK VVPC
Sbjct: 3231 DGRKVVVPC 3239


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1 DGRKNVVPC 9
DGRK VVPC
Sbjct: 3245 DGRKIVVPC 3253


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1 DGRKNVVPC 9
DGRK VVPC
Sbjct: 3245 DGRKIVVPC 3253


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1 DGRKNVVPC 9
DGRK VVPC
Sbjct: 3231 DGRKIVVPC 3239


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 DGRKNVVPC 9
DGRK VVPC
Sbjct: 3210 DGRKLVVPC 3218


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 DGRKNVVPC 9
DGRK VVPC
Sbjct: 3210 DGRKLVVPC 3218


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 DGRKNVVPC 9
DGRK VVPC
Sbjct: 3210 DGRKLVVPC 3218


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 DGRKNVVPC 9
DGRK VVPC
Sbjct: 3210 DGRKLVVPC 3218


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 DGRKNVVPC 9
DGRK VVPC
Sbjct: 3210 DGRKLVVPC 3218


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 DGRKNVVPC 9
DGR+ VVPC
Sbjct: 3230 DGRRIVVPC 3238


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 DGRKNVVPC 9
DGR+ VVPC
Sbjct: 3230 DGRRIVVPC 3238


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 DGRKNVVPC 9
DGR+ VVPC
Sbjct: 3230 DGRRIVVPC 3238


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 DGRKNVVPC 9
DGR+ VVPC
Sbjct: 3230 DGRRIVVPC 3238


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 DGRKNVVPC 9
DGR+ VVPC
Sbjct: 3230 DGRRIVVPC 3238


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 DGRKNVVPC 9
DGR+ VVPC
Sbjct: 3230 DGRRIVVPC 3238


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 DGRKNVVPC 9
DGR+ VVPC
Sbjct: 3212 DGREIVVPC 3220


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 DGRKNVVPC 9
DGR+ VVPC
Sbjct: 3211 DGREIVVPC 3219


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 DGRKNVVPC 9
DGR+ VVPC
Sbjct: 3212 DGREIVVPC 3220


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1 DGRKNVVPC 9
DGR+ VVPC
Sbjct: 3230 DGRELVVPC 3238


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3242 DGRSIVVPC 3250


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3242 DGRSIVVPC 3250


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3238 DGRSIVVPC 3246


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3252 DGRSIVVPC 3260


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3252 DGRSIVVPC 3260


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3252 DGRSIVVPC 3260


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3252 DGRSIVVPC 3260


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3221 DGRSIVVPC 3229


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3208 DGRSLVVPC 3216


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3208 DGRSLVVPC 3216


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3208 DGRSLVVPC 3216


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3208 DGRSLVVPC 3216


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3208 DGRSLVVPC 3216


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3249 DGRTIVVPC 3257


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3243 DGRTIVVPC 3251


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3248 DGRTIVVPC 3256


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3253 DGRTLVVPC 3261


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3250 DGRTLVVPC 3258


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3254 DGRTLVVPC 3262


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3232 DGRTLVVPC 3240


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3232 DGRTLVVPC 3240


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3232 DGRTLVVPC 3240


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3254 DGRTLVVPC 3262


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3232 DGRTLVVPC 3240


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3232 DGRTLVVPC 3240


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3211 DGRTLVVPC 3219


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3208 DGRTLVVPC 3216


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3232 DGRALVVPC 3240


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 DGRKNVVPC 9
DGR +VPC
Sbjct: 3233 DGRSLIVPC 3241


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 DGRKNVVPC 9
DGR +VPC
Sbjct: 3230 DGRTLIVPC 3238


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3211 DGRVLVVPC 3219


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3211 DGRVLVVPC 3219


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3211 DGRVLVVPC 3219


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3211 DGRVLVVPC 3219


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 DGRKNVVPC 9
DGR VVPC
Sbjct: 3211 DGRVLVVPC 3219


>sp|ENV_SIVML|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate K78)

Query: 3 RKNVVPC 9
RKN VPC
Sbjct: 428 RKNYVPC 434


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1 DGRKNVVPC 9
DGR +VPC
Sbjct: 3234 DGRVIIVPC 3242


>sp|254L_IIV6|UNCHARACTERIZED protein 254L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 DGRKNVVPCV 10
DG+KN+ CV
Sbjct: 155 DGKKNLYACV 164


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 DGRKNVVPC 9
DGR +VPC
Sbjct: 3234 DGRVIIVPC 3242


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1 DGRKNVVPC 9
DGR V PC
Sbjct: 3253 DGRTLVTPC 3261


>sp|GLYCO_MMVR|GLYCOPROTEIN mosaic virus (isolate Maize/United

Query: 1 DGRKNVVPC 9
DG+ +V+PC
Sbjct: 363 DGKVSVLPC 371


>sp|ENV_SIVMK|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate K6W)

Query: 3 RKNVVPC 9
R+N VPC
Sbjct: 428 RRNYVPC 434


>sp|ENV_SIVM2|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate Mm251)

Query: 3 RKNVVPC 9
R+N VPC
Sbjct: 428 RRNYVPC 434


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 DGRKNVVPC 9
DGR + PC
Sbjct: 3223 DGRSIIAPC 3231


>sp|CEP2_SHV21|CYTOPLASMIC envelopment protein 2|Saimiriine herpesvirus 2 (strain 11)

Query: 1 DGRKNVVPCV 10
DG+ N PC+
Sbjct: 226 DGKSNSCPCI 235


>sp|ENV_SIVSP|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate

Query: 3 RKNVVPC 9
R+N VPC
Sbjct: 436 RRNYVPC 442


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 DGRKNVVPC 9
DGR + PC
Sbjct: 3212 DGRTIIAPC 3220


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 1 DGRKNVVPCV 10
+GRK V+ CV
Sbjct: 274 NGRKPVIVCV 283


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 DGRKNVVPCV 10
+GRK V+ CV
Sbjct: 274 NGRKPVIVCV 283


>sp|ENV_SIVS4|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate

Query: 3 RKNVVPC 9
+KN VPC
Sbjct: 432 KKNYVPC 438


>sp|YL834_MIMIV|PUTATIVE BTB/POZ domain-containing protein L834|Acanthamoeba polyphaga

Query: 3 RKNVVPCV 10
+KN+ PC+
Sbjct: 79 KKNIQPCI 86


>sp|074L_FRG3G|UNCHARACTERIZED protein 074L|Frog virus 3 (isolate Goorha)

Query: 2 GRKNVVP 8
GR+NV+P
Sbjct: 260 GRRNVLP 266


Query: 2 GRKNVVP 8
GR+NV+P
Sbjct: 291 GRRNVLP 297


>sp|AC114_NPVAC|PROTEIN ORF114|Autographa californica nuclear polyhedrosis virus

Query: 1 DGRKNVVP 8
DG +N+VP
Sbjct: 116 DGNENLVP 123


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 DGRKNVVPC 9
DGR +PC
Sbjct: 6475 DGRTGELPC 6483


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 DGRKNVVPC 9
DGR +PC
Sbjct: 6525 DGRTGELPC 6533


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 DGRKNVVPC 9
DGR +PC
Sbjct: 6467 DGRAGELPC 6475


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 DGRKNVVPC 9
DGR +PC
Sbjct: 6519 DGRAGELPC 6527


>sp|CVC1_ALHV1|CAPSID vertex component 1|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 DGRKNVVPCV 10
+G KN+V C+
Sbjct: 266 EGYKNLVSCL 275


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 DGRKNVVPC 9
DGR +PC
Sbjct: 6523 DGRAGELPC 6531




67|Sequence|331|340|VVPCVLSVNG

>sp|YR220_MIMIV|UNCHARACTERIZED protein R220|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VVPCVLS 7
V+PCVL+
Sbjct: 167 VIPCVLT 173


>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 3 PCVLSVNG 10
PCV VNG
Sbjct: 1990 PCVARVNG 1997


>sp|VME1_WBV24|MEMBRANE protein|White bream virus (isolate Blicca

Query: 3 PCVLSVNG 10
P VLSVNG
Sbjct: 138 PTVLSVNG 145


>sp|ESTE_HVAVE|PUTATIVE esterase|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 3 PCVLSVN 9
PC LSVN
Sbjct: 365 PCPLSVN 371


>sp|RDRP_MYRV9|RNA-DIRECTED RNA polymerase VP1|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 3 PCVLSVNG 10
PC S+NG
Sbjct: 192 PCCTSLNG 199


>sp|POLS_MIDDV|STRUCTURAL polyprotein|Middelburg virus

Query: 1 VVPCVLSV 8
VVPC LS+
Sbjct: 742 VVPCTLSL 749




68|Sequence|336|345|LSVNGDLDRG

>sp|DPOL_TNAVC|DNA polymerase|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 1 LSVNGDLDRG 10
+ VNG +DRG
Sbjct: 129 MRVNGTVDRG 138




69|Sequence|341|350|DLDRGMLAYL

***** No hits found ******


70|Sequence|346|355|MLAYLYDSFQ

>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 AYLYDSF 9
AY YDSF
Sbjct: 50 AYFYDSF 56


>sp|CAPSD_FDVS|INNER capsid protein S2|Fiji disease virus (isolate Sugarcane)

Query: 1 MLAYLYDSF 9
MLA LYD+F
Sbjct: 716 MLATLYDTF 724


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 1 MLAYLYDSFQ 10
+ YL DSFQ
Sbjct: 1841 IFTYLKDSFQ 1850


>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 1 MLAYLYDSF 9
MLAY Y +F
Sbjct: 218 MLAYSYKAF 226


>sp|Y090_AFV2P|UNCHARACTERIZED protein ORF90|Acidianus filamentous virus 2 (isolate

Query: 2 LAYLYDSFQ 10
L LYD+FQ
Sbjct: 50 LGKLYDTFQ 58




71|Sequence|351|360|YDSFQLTENS

>sp|YL767_MIMIV|PUTATIVE ankyrin repeat protein L767|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YDSFQLTE 8
YDSF+LT+
Sbjct: 239 YDSFELTK 246


>sp|YL594_MIMIV|UNCHARACTERIZED protein L594|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 DSFQLTENS 10
D F+L ENS
Sbjct: 202 DMFELNENS 210




72|Sequence|356|365|LTENSFTRKK

>sp|G3P_BPFD|ATTACHMENT protein G3P|Enterobacteria phage fd (Bacteriophage fd)

Query: 2 TENSFT 7
TENSFT
Sbjct: 31 TENSFT 36


>sp|G3P_BPF1|ATTACHMENT protein G3P|Enterobacteria phage f1 (Bacteriophage f1)

Query: 2 TENSFT 7
TENSFT
Sbjct: 31 TENSFT 36


>sp|G3P_BPM13|ATTACHMENT protein G3P|Enterobacteria phage M13 (Bacteriophage M13)

Query: 2 TENSFT 7
TENSFT
Sbjct: 31 TENSFT 36




73|Sequence|361|370|FTRKKNLHRK

>sp|ALPHA_BSMV|REPLICATION protein alpha-A|Barley stripe mosaic virus (BSMV)

Query: 1 FTRKKNLHRK 10
F RKKNL+ K
Sbjct: 874 FKRKKNLNSK 883


>sp|5055R_ASFM2|PROTEIN MGF 505-5R|African swine fever virus (isolate

Query: 1 FTRKKNLHRK 10
F R+KNL+R+
Sbjct: 276 FLRRKNLYRE 285


>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P

Query: 1 FTRKKNLH 8
+TR +NLH
Sbjct: 366 YTRDQNLH 373


>sp|YG29_BPSP1|UNCHARACTERIZED 16.2 kDa protein in|Bacillus phage SP01 (Bacteriophage SP01)

Query: 2 TRKKNLHR 9
TRKK +HR
Sbjct: 32 TRKKVVHR 39




74|Sequence|366|375|NLHRKVLKLH

>sp|VG64_ICHVA|UNCHARACTERIZED protein ORF64|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 LHRKVLKLH 10
+H K +KLH
Sbjct: 447 IHNKTIKLH 455


>sp|REP_BPI22|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage I2-2 (Bacteriophage I2-2)

Query: 3 HRKVLK 8
HRKVLK
Sbjct: 290 HRKVLK 295




75|Sequence|371|380|VLKLHPCLAP

>sp|VRPI_BPT7|BACTERIAL RNA polymerase inhibitor|Escherichia phage T7 (Bacteriophage T7)

Query: 1 VLKLHPCLAP 10
V ++ PC+AP
Sbjct: 54 VTRVRPCVAP 63


>sp|A28_RFVKA|ENVELOPE protein A28 homolog|Rabbit fibroma virus (strain Kasza)

Query: 4 LHPCLAP 10
L+PC++P
Sbjct: 119 LNPCISP 125


>sp|YL101_MIMIV|UNCHARACTERIZED protein L101|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LKLHPCL 8
LKLHP L
Sbjct: 331 LKLHPSL 337


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 2 LKLHPCLAP 10
L LHP L+P
Sbjct: 610 LHLHPHLSP 618




76|Sequence|376|385|PCLAPIKVAL

>sp|V_PI4HA|NON-STRUCTURAL protein V|Human parainfluenza 4a virus (strain

Query: 1 PCLAPIK 7
PC AP+K
Sbjct: 199 PCCAPVK 205


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1 PCLAPIKV 8
PC +PIK+
Sbjct: 352 PCFSPIKI 359


>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain

Query: 1 PCLAPIK 7
PC AP+K
Sbjct: 199 PCCAPVK 205


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 1 PCLAPIKV 8
PC +PIK+
Sbjct: 343 PCFSPIKI 350


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 1 PCLAPIKV 8
PC +P+K+
Sbjct: 352 PCFSPVKI 359


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1 PCLAPIKV 8
PC +P+K+
Sbjct: 352 PCFSPVKI 359


>sp|POLS_AURAV|STRUCTURAL polyprotein|Aura virus (AURAV)

Query: 1 PCLAPIKV 8
PC +PIK+
Sbjct: 353 PCYSPIKI 360


>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 PCLAPIK 7
PCL P++
Sbjct: 34 PCLQPVR 40


>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 PCLAPIK 7
PCL P++
Sbjct: 34 PCLQPVR 40


>sp|FUS_RINDR|FUSION glycoprotein F0|Rinderpest virus (strain RBOK) (RDV)

Query: 3 LAPIKVAL 10
L PIKVAL
Sbjct: 80 LQPIKVAL 87


>sp|FUS_RINDK|FUSION glycoprotein F0|Rinderpest virus (strain Kabete O)

Query: 3 LAPIKVAL 10
L PIKVAL
Sbjct: 80 LQPIKVAL 87




77|Sequence|381|390|IKVALDVGRG

>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra

Query: 3 VALDVGRG 10
+ALD GRG
Sbjct: 201 IALDSGRG 208


>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)

Query: 3 VALDVGRG 10
+ALD GRG
Sbjct: 200 IALDSGRG 207


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 IKVALDVGR 9
+KVA+ VGR
Sbjct: 231 VKVAIKVGR 239


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 IKVALDVGR 9
+KVA+ VGR
Sbjct: 231 VKVAIKVGR 239


>sp|CAPSD_MPRVN|MAJOR inner capsid protein VP3|Micromonas pusilla reovirus (isolate

Query: 1 IKVALDVGRG 10
I ++DVGRG
Sbjct: 360 ISDSIDVGRG 369


>sp|PG035_MONPV|PROTEIN OPG035|Monkeypox virus (MPXV)

Query: 2 KVALDVGR 9
KVA D+GR
Sbjct: 78 KVARDIGR 85




78|Sequence|386|395|DVGRGPTLEL

>sp|RDRP_GRVMC|RNA-DIRECTED RNA polymerase|Groundnut rosette virus (strain MC1)

Query: 3 GRGPTLE 9
GR PTLE
Sbjct: 115 GRAPTLE 121


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 DVGRGP 6
D+GRGP
Sbjct: 1531 DMGRGP 1536


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 DVGRGP 6
D+GRGP
Sbjct: 1531 DMGRGP 1536


>sp|Y147_AFV2P|UNCHARACTERIZED protein ORF147|Acidianus filamentous virus 2 (isolate

Query: 1 DVGRGPTLEL 10
DVG G TL+L
Sbjct: 72 DVGNGITLDL 81


>sp|POLS_IBDVE|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 3 GRGPTLE 9
RGPTLE
Sbjct: 842 ARGPTLE 848


>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)

Query: 2 VGRGPTLEL 10
GRGPT +L
Sbjct: 45 TGRGPTQKL 53


>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)

Query: 3 GRGPTLEL 10
GRGPT +L
Sbjct: 46 GRGPTQKL 53




79|Sequence|391|400|PTLELRQVCQ

>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 TLELRQVCQ 10
TLELR +C+
Sbjct: 666 TLELRDICK 674


>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)

Query: 2 TLELRQVCQ 10
TLELR +C+
Sbjct: 382 TLELRDICK 390


>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)

Query: 2 TLELRQVCQ 10
TLELR +C+
Sbjct: 666 TLELRAICK 674


>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)

Query: 1 PTLELRQVCQ 10
PTL R+ C+
Sbjct: 84 PTLPCRETCR 93


>sp|P48_NPVAC|P48 protein|Autographa californica nuclear polyhedrosis virus

Query: 3 LELRQVCQ 10
LELR VC+
Sbjct: 314 LELRNVCR 321


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 1 PTLELRQVC 9
PTL L ++C
Sbjct: 324 PTLRLNELC 332




80|Sequence|396|405|RQVCQGLFNE

>sp|UBC3_MIMIV|PROBABLE ubiquitin-conjugating enzyme E2 R521|Acanthamoeba polyphaga mimivirus

Query: 1 RQVCQGLFNE 10
+QVCQ NE
Sbjct: 1407 KQVCQTWINE 1416


>sp|RDRP_SHMV|REPLICASE large subunit|Sunn-hemp mosaic virus (SHMV) (TMV

Query: 1 RQVCQGLFNE 10
R+VC G F +
Sbjct: 1253 RKVCDGFFGK 1262


>sp|002L_FRG3G|UNCHARACTERIZED protein 002L|Frog virus 3 (isolate Goorha)

Query: 2 QVCQGLFN 9
QVCQ +FN
Sbjct: 231 QVCQIVFN 238


>sp|YR186_MIMIV|PUTATIVE transposase R186|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RQVCQGLF 8
+ VC GLF
Sbjct: 209 KNVCNGLF 216


>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)

Query: 3 VCQGLFNE 10
+C +FNE
Sbjct: 1500 ICNSIFNE 1507


>sp|POL1_CPSMV|RNA1 polyprotein|Cowpea severe mosaic virus (strain

Query: 3 VCQGLFNE 10
+C +FNE
Sbjct: 1493 ICNSIFNE 1500


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 3 VCQGLFNE 10
+C +FNE
Sbjct: 1488 ICNSIFNE 1495




81|Sequence|401|410|GLFNELLENG

>sp|LTP_GAHVM|LARGE tegument protein deneddylase|Gallid herpesvirus 2 (strain

Query: 2 LFNELLENG 10
LFN ++ENG
Sbjct: 641 LFNYIIENG 649


>sp|M1_I77AF|MATRIX protein 1|Influenza A virus (strain A/Gull/Maryland/704/1977

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I82A2|MATRIX protein 1|Influenza A virus (strain A/Camel/Mongolia/1982

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 85 GLKNDLLEN 93


>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 225 GLKNDLLEN 233


>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31

Query: 1 GLFNELLEN 9
GL N+LLEN
Sbjct: 228 GLKNDLLEN 236


>sp|POL1_APMV|RNA1 polyprotein|Andean potato mottle virus (APMV)

Query: 1 GLFNELL 7
G+FNELL
Sbjct: 376 GIFNELL 382


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 GLFNELLE 8
G+FN LLE
Sbjct: 1689 GIFNSLLE 1696


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 GLFNELLE 8
G+FN LLE
Sbjct: 1689 GIFNSLLE 1696


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 GLFNELLE 8
G+FN LLE
Sbjct: 1689 GIFNSLLE 1696


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 GLFNELLE 8
G+FN LLE
Sbjct: 1689 GIFNSLLE 1696


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 GLFNELLE 8
G+FN LLE
Sbjct: 1689 GIFNSLLE 1696


>sp|YR428_MIMIV|UNCHARACTERIZED protein R428|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 FNELLENG 10
FN++L+NG
Sbjct: 12 FNKMLQNG 19


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 LFNELLENG 10
LFNE ENG
Sbjct: 391 LFNETGENG 399


>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58

Query: 2 LFNELLENG 10
LFN ++E+G
Sbjct: 216 LFNSIIEDG 224


>sp|VG26_BPMD2|MINOR tail protein Gp26|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 LFNELLENG 10
LFN L+E+G
Sbjct: 323 LFNRLMESG 331


>sp|PARP_IIV6|PUTATIVE poly [ADP-ribose] polymerase-like 100L|Invertebrate iridescent

Query: 3 FNELLENG 10
+NELL+NG
Sbjct: 139 YNELLQNG 146


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 1 GLFNELLE 8
GL+NE LE
Sbjct: 1611 GLWNEFLE 1618


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 GLFNELLE 8
GL+NE LE
Sbjct: 1611 GLWNEFLE 1618


>sp|VG26_BPML5|MINOR tail protein Gp26|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 LFNELLENG 10
LFN L+E+G
Sbjct: 324 LFNRLMESG 332


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 GLFNELLE 8
G+FN LLE
Sbjct: 5097 GVFNTLLE 5104


>sp|RDRP_GRVMC|RNA-DIRECTED RNA polymerase|Groundnut rosette virus (strain MC1)

Query: 1 GLFNELLENG 10
G+ +ELL+NG
Sbjct: 595 GIPHELLDNG 604


>sp|V018_FOWPN|PUTATIVE ankyrin repeat protein FPV018|Fowlpox virus (strain NVSL) (FPV)

Query: 2 LFNELLENG 10
LFN L++NG
Sbjct: 319 LFNILVKNG 327


>sp|CEF_BPT4|PROTEIN cef|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 GLFNELLENG 10
G+F E+ E+G
Sbjct: 54 GVFREITEDG 63




82|Sequence|406|415|LLENGISVWP

>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype

Query: 1 LLENGISVWP 10
LLENG+ V+P
Sbjct: 3 LLENGVRVFP 12


>sp|ORFD_PSHV1|UNCHARACTERIZED protein ORFD|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 LLENGISVWP 10
+LENG WP
Sbjct: 154 VLENGTEAWP 163


>sp|DPOL_RHCM6|DNA polymerase catalytic subunit|Rhesus cytomegalovirus (strain 68-1)

Query: 1 LLENGISVW 9
LLENGI V+
Sbjct: 217 LLENGIPVY 225


>sp|GLYCO_MMVR|GLYCOPROTEIN mosaic virus (isolate Maize/United

Query: 1 LLENGISVWP 10
L NG+S WP
Sbjct: 139 FLHNGMSSWP 148


>sp|DPOL_SHV21|DNA polymerase catalytic subunit|Saimiriine herpesvirus 2 (strain 11)

Query: 2 LENGISVW 9
LENG S+W
Sbjct: 65 LENGKSMW 72


>sp|VP1_APRVF|PUTATIVE structural protein VP1|Aedes pseudoscutellaris reovirus (isolate

Query: 1 LLENGIS 7
LLENGIS
Sbjct: 603 LLENGIS 609


>sp|DIT9_BPPZA|TAIL knob protein gp9|Bacillus phage PZA (Bacteriophage PZA)

Query: 1 LLENGISVW 9
+ +NGI++W
Sbjct: 576 IFDNGITLW 584


>sp|DIT9_BPPH2|TAIL knob protein gp9|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 1 LLENGISVW 9
+ +NGI++W
Sbjct: 576 IFDNGITLW 584


>sp|TMP_BPFO1|PROBABLE tape measure protein|Salmonella phage Felix O1 (isolate

Query: 1 LLENGISVW 9
L++NG+S W
Sbjct: 660 LIDNGLSNW 668


>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 ENGISVW 9
E+G+SVW
Sbjct: 181 EDGVSVW 187


>sp|IR01_HCMVA|UNCHARACTERIZED protein HKLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 ENGISVW 9
E+G+SVW
Sbjct: 181 EDGVSVW 187


>sp|YL581_MIMIV|UNCHARACTERIZED protein L581|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 NGISVWP 10
+GI VWP
Sbjct: 540 SGIYVWP 546


>sp|REN_TYLCC|REPLICATION enhancer protein|Tomato yellow leaf curl China

Query: 3 ENGISVW 9
ENG+ +W
Sbjct: 15 ENGVYIW 21


>sp|REN_TMOV|REPLICATION enhancer protein|Tomato mottle virus (isolate Florida)

Query: 3 ENGISVW 9
ENG+ +W
Sbjct: 15 ENGVYIW 21


>sp|REN_TGMVY|REPLICATION enhancer protein|Tomato golden mosaic virus (strain

Query: 3 ENGISVW 9
ENG+ +W
Sbjct: 15 ENGVYIW 21


>sp|REN_ABMVW|REPLICATION enhancer protein|Abutilon mosaic virus (isolate West

Query: 3 ENGISVW 9
ENG+ +W
Sbjct: 15 ENGVYIW 21


>sp|POLN_AHEV|NON-STRUCTURAL polyprotein pORF1|Avian hepatitis E virus (isolate

Query: 5 GISVWP 10
GIS WP
Sbjct: 1242 GISAWP 1247


>sp|VOLD_BPP2|OLD nuclease|Escherichia phage P2 (Bacteriophage P2)

Query: 1 LLENGISVW 9
L +NGI +W
Sbjct: 529 LKDNGIYIW 537


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 4 NGISVW 9
NG++VW
Sbjct: 390 NGVTVW 395


>sp|REN_PYMVV|REPLICATION enhancer protein|Potato yellow mosaic virus (isolate

Query: 3 ENGISVW 9
ENG+ +W
Sbjct: 15 ENGVFIW 21


>sp|REN_TYLCI|REPLICATION enhancer protein|Tomato yellow leaf curl virus

Query: 3 ENGISVW 9
ENG+ +W
Sbjct: 15 ENGVFIW 21


>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)

Query: 1 LLENGISV 8
+LENGI++
Sbjct: 45 ILENGIAI 52


>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)

Query: 1 LLENGISV 8
+LENGI++
Sbjct: 45 ILENGIAI 52


>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann

Query: 1 LLENGISV 8
+LENGI++
Sbjct: 45 ILENGIAI 52


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 1 LLENGISVW 9
L+ENG +W
Sbjct: 763 LVENGYMMW 771


>sp|REN_MYMVV|REPLICATION enhancer protein|Mungbean yellow mosaic virus (strain

Query: 2 LENGISVW 9
L+NG+ +W
Sbjct: 14 LKNGVFIW 21


>sp|POLG_NIGSP|GENOME polyprotein|Nigerian sorghum potyvirus (Dawa mosaic

Query: 1 LLENGISVW 9
+L NG+ VW
Sbjct: 137 ILMNGLMVW 145


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 4 NGISVW 9
NG++VW
Sbjct: 390 NGVTVW 395


>sp|ETFS_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 1 LLENGISV 8
LLENG+ +
Sbjct: 480 LLENGVQI 487


>sp|VF113_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 1 LLENGISV 8
LLENG+ +
Sbjct: 480 LLENGVQI 487


>sp|NCAP_TAMVU|NUCLEOPROTEIN mammarenavirus (isolate Rat/United States/W

Query: 2 LENGISVW 9
L+ G+SVW
Sbjct: 15 LKRGLSVW 22


>sp|ETFS_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 1 LLENGISV 8
LLENG+ +
Sbjct: 480 LLENGVQI 487


>sp|ETFS_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 1 LLENGISV 8
LLENG+ +
Sbjct: 480 LLENGVQI 487


>sp|ETFS_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 1 LLENGISV 8
LLENG+ +
Sbjct: 445 LLENGVQI 452


>sp|V242_FOWPN|PUTATIVE ankyrin repeat protein FPV242|Fowlpox virus (strain NVSL) (FPV)

Query: 1 LLENGISV 8
L++NGIS+
Sbjct: 234 LIDNGISI 241


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 1 LLENGISVW 9
+L NG+ VW
Sbjct: 2942 VLMNGLMVW 2950


>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)

Query: 1 LLENGISVW 9
L+ NG+ VW
Sbjct: 3097 LILNGLMVW 3105


>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0

Query: 1 LLENGISVW 9
L+ NG+ VW
Sbjct: 3097 LILNGLMVW 3105


>sp|LH3_ADEO7|HEXON-INTERLACING protein LH3|Ovine adenovirus D serotype 7

Query: 3 ENGISVWP 10
+NG +VWP
Sbjct: 266 DNGGNVWP 273




83|Sequence|411|420|ISVWPGYLET

>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48

Query: 1 ISVWPGYLE 9
IS+WP +L+
Sbjct: 225 ISIWPDFLK 233


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 2 SVWPGY 7
SVWP Y
Sbjct: 1767 SVWPAY 1772


>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5

Query: 1 ISVWPGYL 8
I++WPG L
Sbjct: 222 INMWPGVL 229


>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2

Query: 1 ISVWPGYL 8
I++WPG L
Sbjct: 221 INMWPGVL 228


>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)

Query: 4 WPGYLE 9
W GYLE
Sbjct: 842 WSGYLE 847


>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)

Query: 4 WPGYLE 9
W GYLE
Sbjct: 842 WSGYLE 847


>sp|Y076_OSHVF|UNCHARACTERIZED protein ORF76|Ostreid herpesvirus 1 (isolate France)

Query: 1 ISVWPGY 7
+SV+PGY
Sbjct: 232 VSVFPGY 238


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 3 VWPGYLET 10
VWP YL +
Sbjct: 106 VWPHYLSS 113


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 3 VWPGYLE 9
VWP YL+
Sbjct: 106 VWPDYLK 112


>sp|YR654_MIMIV|PUTATIVE fucosyltransferase R654|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 WPGY 7
WPGY
Sbjct: 498 WPGY 501


>sp|NS7B_CVCBG|NON-STRUCTURAL protein 7b|Canine coronavirus (strain BGF10) (CCoV)

Query: 4 WPGY 7
WPGY
Sbjct: 77 WPGY 80


>sp|NS7B_CVCAI|NON-STRUCTURAL protein 7b|Canine coronavirus (strain Insavc-1) (CCoV)

Query: 4 WPGY 7
WPGY
Sbjct: 77 WPGY 80


>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 2 SVWPGYLE 9
S W GYL+
Sbjct: 735 SFWSGYLQ 742


>sp|NS7B_CVCAK|NON-STRUCTURAL protein 7b|Canine coronavirus (strain K378) (CCoV)

Query: 4 WPGY 7
WPGY
Sbjct: 77 WPGY 80


>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 3 VWPGYLE 9
VWP YL+
Sbjct: 106 VWPTYLK 112


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 3 VWPGYLE 9
VWP YL+
Sbjct: 106 VWPTYLK 112


>sp|YL737_MIMIV|UNCHARACTERIZED protein L737|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SVWPGYLE 9
SV PGY+E
Sbjct: 137 SVMPGYVE 144


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 3 VWPGYL 8
VWP YL
Sbjct: 106 VWPDYL 111


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 3 VWPGYL 8
VWP YL
Sbjct: 106 VWPDYL 111


>sp|VE6_HPV43|PROTEIN E6|Human papillomavirus 43

Query: 2 SVWPGY 7
SVW GY
Sbjct: 131 SVWKGY 136


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 3 VWPGYL 8
VWP YL
Sbjct: 106 VWPDYL 111


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 3 VWPGYLE 9
VWP YL+
Sbjct: 106 VWPEYLK 112


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 4 WPGYLE 9
WP YLE
Sbjct: 107 WPKYLE 112


>sp|DPOL_BPMD2|DNA polymerase|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 SVWPGYLET 10
S+WP L+T
Sbjct: 115 SLWPKILDT 123


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 3 VWPGYL 8
VWP YL
Sbjct: 106 VWPTYL 111


>sp|GB_BHV2B|ENVELOPE glycoprotein B|Bovine herpesvirus 2 (strain BMV)

Query: 2 SVWPGY 7
SVW GY
Sbjct: 195 SVWSGY 200


>sp|VF859_ASFWA|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 4 WPGY 7
WPGY
Sbjct: 811 WPGY 814


>sp|VF859_ASFP4|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 4 WPGY 7
WPGY
Sbjct: 811 WPGY 814


>sp|VF859_ASFK5|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 4 WPGY 7
WPGY
Sbjct: 811 WPGY 814


>sp|VF859_ASFM2|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 4 WPGY 7
WPGY
Sbjct: 811 WPGY 814


>sp|VF859_ASFB7|PROBABLE helicase A859L|African swine fever virus (strain

Query: 4 WPGY 7
WPGY
Sbjct: 811 WPGY 814


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 ISVWPGYLET 10
+ VW GYL +
Sbjct: 1442 VGVWLGYLPS 1451


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 3 VWPGYL 8
VWP YL
Sbjct: 106 VWPHYL 111


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 3 VWPGYL 8
VWP YL
Sbjct: 106 VWPHYL 111


>sp|ADPRL_MIMIV|PUTATIVE ADP-ribosyl glycohydrolase L444|Acanthamoeba polyphaga mimivirus

Query: 1 ISVWPGYL 8
+++WP YL
Sbjct: 320 VNLWPHYL 327


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 3 VWPGYL 8
VWP YL
Sbjct: 106 VWPHYL 111


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 3 VWPGYLE 9
VWP YL+
Sbjct: 106 VWPDYLK 112


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 1 ISVWPGYLET 10
+ VW GYL +
Sbjct: 1442 VGVWLGYLPS 1451


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 3 VWPGYLE 9
VWP YL+
Sbjct: 106 VWPDYLK 112


>sp|O22R_FRG3G|PUTATIVE helicase 022R|Frog virus 3 (isolate Goorha)

Query: 4 WPGY 7
WPGY
Sbjct: 962 WPGY 965


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 3 VWPGYL 8
VWP YL
Sbjct: 106 VWPSYL 111


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 ISVWPGYLET 10
+ W GYL +
Sbjct: 254 VGAWDGYLSS 263


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 4 WPGYLE 9
WP YL+
Sbjct: 107 WPSYLD 112


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 ISVWPGYLET 10
+ W GYL +
Sbjct: 254 VGAWDGYLSS 263




84|Sequence|416|425|GYLETMQSSL

>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10

Query: 1 GYLETMQSSL 10
YL TM SSL
Sbjct: 417 AYLHTMNSSL 426


>sp|Y022_OSHVF|UNCHARACTERIZED protein ORF22|Ostreid herpesvirus 1 (isolate France)

Query: 1 GYLETMQ 7
GYL+TM+
Sbjct: 1252 GYLDTME 1258




85|Sequence|421|430|MQSSLEQLYS

***** No hits found ******


86|Sequence|426|435|EQLYSKYDEM

>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 EQLYSKYDEM 10
E LY +YDEM
Sbjct: 1705 EVLYQQYDEM 1714


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 EQLYSKYDEM 10
E LY +YDEM
Sbjct: 1705 EVLYQQYDEM 1714


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1 EQLYSKYDEM 10
E LY +YDEM
Sbjct: 1704 EVLYQQYDEM 1713


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3 LYSKYDEM 10
LY +YDEM
Sbjct: 1709 LYQQYDEM 1716


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1700 EVLYQQFDEM 1709


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1701 EVLYQQFDEM 1710


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1704 EVLYQQFDEM 1713


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1700 EVLYQQFDEM 1709


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1700 EVLYQQFDEM 1709


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1699 EVLYQQFDEM 1708


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1699 ELLYQEFDEM 1708


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1699 EVLYQEFDEM 1708


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1699 EVLYQEFDEM 1708


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1699 EVLYQEFDEM 1708


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1699 EVLYQEFDEM 1708


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1703 EILYQQFDEM 1712


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 EQLYSKYDEM 10
E LY ++DEM
Sbjct: 1704 EILYQQFDEM 1713


>sp|REP_BPI22|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage I2-2 (Bacteriophage I2-2)

Query: 4 YSKYDEM 10
YSKYDE+
Sbjct: 175 YSKYDEV 181


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1 EQLYSKYDEM 10
E LY +DEM
Sbjct: 1703 EVLYEAFDEM 1712


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 EQLYSKYDEM 10
E LY +DEM
Sbjct: 1703 EVLYEAFDEM 1712


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 EQLYSKYDEM 10
E LY +DEM
Sbjct: 1703 EVLYEAFDEM 1712


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1 EQLYSKYDEM 10
E LY +DEM
Sbjct: 1703 EVLYEAFDEM 1712


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 EQLYSKYDEM 10
E LY +DEM
Sbjct: 1703 EILYEAFDEM 1712


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 EQLYSKYDEM 10
E LY +DEM
Sbjct: 1703 EILYEAFDEM 1712


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 EQLYSKYDE 9
++LYS+YDE
Sbjct: 2531 KELYSQYDE 2539


>sp|VF436_IIV3|UNCHARACTERIZED protein 060L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 EQLYSKYDEM 10
EQ+ +KY++M
Sbjct: 10 EQIVNKYNKM 19




87|Sequence|431|440|KYDEMSILFT

>sp|HOL26_BPSPP|PUTATIVE antiholin|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 2 YDEMSILFT 10
YD +S+LFT
Sbjct: 42 YDAVSVLFT 50


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 YDEMSILF 9
+DE+S+LF
Sbjct: 434 HDELSLLF 441


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 2 YDEMSILF 9
+DE+S+LF
Sbjct: 434 HDELSLLF 441


>sp|SEMA_ECTVM|SEMAPHORIN-LIKE protein 139|Ectromelia virus (strain Moscow) (ECTV)

Query: 2 YDEMSILFT 10
YD++ ILFT
Sbjct: 166 YDKVYILFT 174




88|Sequence|436|445|SILFTVLVTE

>sp|HOL26_BPSPP|PUTATIVE antiholin|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 1 SILFTVLVT 9
S+LFT++VT
Sbjct: 46 SVLFTIVVT 54




89|Sequence|441|450|VLVTETTLEN

***** No hits found ******


90|Sequence|446|455|TTLENGLIHL

>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 2 TLENGLIH 9
TLENG+ H
Sbjct: 754 TLENGVTH 761


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 2 TLENGLIH 9
TLENG+ H
Sbjct: 754 TLENGVTH 761


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 TLENGLIHL 10
T++NG IHL
Sbjct: 2495 TVKNGSIHL 2503


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 TLENGLIHL 10
T++NG IHL
Sbjct: 2495 TVKNGSIHL 2503


>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus

Query: 1 TTLENGLIH 9
TTL NG+I+
Sbjct: 439 TTLVNGMIY 447


>sp|FIBC_BPT5|STRAIGHT fiber protein pb4|Escherichia phage T5 (Enterobacteria phage

Query: 3 LENGLIHL 10
L+NG IH+
Sbjct: 680 LQNGYIHI 687


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 TLENGLIHL 10
T++NG +HL
Sbjct: 2466 TVKNGALHL 2474


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 TLENGLIHL 10
T++NG +HL
Sbjct: 2466 TVKNGALHL 2474


>sp|YL574_MIMIV|UNCHARACTERIZED protein L574|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 TLENGLI 8
TLENG+I
Sbjct: 91 TLENGVI 97


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 TLENGLIH 9
+LE GLIH
Sbjct: 170 SLERGLIH 177


>sp|YL060_MIMIV|PUTATIVE F-box and FNIP repeat-containing|Acanthamoeba polyphaga mimivirus

Query: 1 TTLENGLIHL 10
TTL GL HL
Sbjct: 197 TTLPYGLTHL 206


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 2 TLENGLIH 9
+LE GLIH
Sbjct: 170 SLERGLIH 177




91|Sequence|451|460|GLIHLRSRDT

>sp|ICP46_FRG3G|IMMEDIATE-EARLY protein ICP-46|Frog virus 3 (isolate Goorha)

Query: 2 LIHLRSRD 9
L+HLRS+D
Sbjct: 207 LLHLRSQD 214


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1 GLIHLRSRDT 10
G++H S+DT
Sbjct: 1307 GVLHQNSKDT 1316


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1 GLIHLRSRDT 10
G++H S+DT
Sbjct: 1307 GVLHQNSKDT 1316


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 GLIHLRSRDT 10
G++H S+DT
Sbjct: 1307 GVLHQNSKDT 1316


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 GLIHLRSRDT 10
G++H S+DT
Sbjct: 1307 GVLHQNSKDT 1316


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 GLIHLRSRDT 10
G++H S+DT
Sbjct: 1307 GVLHQNSKDT 1316


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 GLIHLRSRDT 10
G++H S+DT
Sbjct: 1307 GVLHQNSKDT 1316




92|Sequence|456|465|RSRDTTMKEM

>sp|REP_CSMV|REPLICATION-ASSOCIATED protein|Chloris striate mosaic virus (CSMV)

Query: 2 SRDTTMKEM 10
SRD TMK++
Sbjct: 152 SRDKTMKQI 160


>sp|VF295_IIV6|UNCHARACTERIZED protein 295L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 RSRDTTMKEM 10
+S TT+KEM
Sbjct: 977 KSSKTTLKEM 986




93|Sequence|461|470|TMKEMMHISK

>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1

Query: 1 TMKEMMHI 8
T+KE+MHI
Sbjct: 428 TLKEVMHI 435


>sp|PG204_VACCW|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 1 TMKEMMHI 8
TMK M+HI
Sbjct: 2 TMKMMVHI 9


>sp|MU2_REOVJ|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 2 (strain D5/Jones)

Query: 1 TMKEMMHIS 9
TM+ MMH++
Sbjct: 706 TMRYMMHLT 714


>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 1 TMKEMMHI 8
TMK M+HI
Sbjct: 2 TMKMMVHI 9




94|Sequence|466|475|MHISKLKDFL

>sp|DNBI_ELHVK|MAJOR DNA-binding protein|Elephantid herpesvirus 1 (isolate Asian

Query: 2 HISKLKDF 9
H+S L+DF
Sbjct: 738 HVSSLRDF 745


>sp|VG22_ICHVA|UNCHARACTERIZED protein ORF22|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 HISKLKDFL 10
H+SK+KD
Sbjct: 100 HLSKVKDIF 108




95|Sequence|471|485|LKDFLIKYISSAKNV

>sp|YL117_MIMIV|UNCHARACTERIZED protein L117|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KDFLIKYISSAKN 14
KDF+ ++S AKN
Sbjct: 62 KDFMKDFLSMAKN 74


>sp|DNBI_ELHVK|MAJOR DNA-binding protein|Elephantid herpesvirus 1 (isolate Asian

Query: 1 LKDFLIKYISSAKN 14
L+DF IKY KN
Sbjct: 742 LRDFRIKYKPIPKN 755


>sp|DDA_BPT4|ATP-DEPENDENT DNA helicase dda|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 LKDFLIKYISSAKNV 15
L+DF++ Y S K++
Sbjct: 215 LRDFMVNYFSIVKSL 229


>sp|1101L_ASFK5|PROTEIN MGF 110-1L|African swine fever virus (isolate

Query: 3 DFLIKYISSAK 13
DF I YI+S K
Sbjct: 83 DFCIYYITSIK 93


>sp|1101L_ASFB7|PROTEIN MGF 110-1L|African swine fever virus (strain

Query: 3 DFLIKYISSAK 13
DF I YI+S K
Sbjct: 83 DFCIYYITSIK 93


>sp|EXLYS_BPDPK|PEPTIDOGLYCAN hydrolase gp181|Pseudomonas phage phiKZ

Query: 1 LKDFLIK 7
LKDFLIK
Sbjct: 1345 LKDFLIK 1351


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 1 LKDFLIKYIS 10
L+ FL+KY++
Sbjct: 2839 LQKFLVKYLA 2848


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 LKDFLIKYISSAKN 14
LKD L++Y S+ ++
Sbjct: 1972 LKDKLLRYASAKQS 1985


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1 LKDFLIKYISSAKN 14
LKD L++Y S+ ++
Sbjct: 1945 LKDKLLRYASAKQS 1958


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1 LKDFLIKYISSAKN 14
LKD L++Y S+ ++
Sbjct: 1950 LKDKLLRYASAKQS 1963


>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)

Query: 2 KDFLIKYISS 11
++FL+KY+ +
Sbjct: 522 REFLLKYVEA 531


>sp|RPB2_FRG3G|PUTATIVE DNA-directed RNA polymerase II|Frog virus 3 (isolate Goorha)

Query: 1 LKDFLIKYISSA 12
+++FL Y+SSA
Sbjct: 79 MEEFLHLYVSSA 90


>sp|PRIM_ELHVK|DNA primase|Elephantid herpesvirus 1 (isolate Asian

Query: 1 LKDFLIKYISSA 12
+KDF+I SSA
Sbjct: 236 MKDFMIMIQSSA 247




96|Sequence|476|485|IKYISSAKNV

>sp|CAPSD_PAVP9|CAPSID protein VP1|Porcine parvovirus (strain 90HS) (PPV)

Query: 2 KYISSAKN 9
KYI S KN
Sbjct: 47 KYIKSGKN 54


>sp|YR096_MIMIV|PUTATIVE ankyrin repeat protein R96|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 IKYISSAKN 9
+KYI SAKN
Sbjct: 284 LKYIISAKN 292


>sp|CAPSD_PAVPN|CAPSID protein VP1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 2 KYISSAKN 9
KYI S KN
Sbjct: 47 KYIKSGKN 54


>sp|CAPSD_PAVPK|CAPSID protein VP1|Porcine parvovirus (strain Kresse) (PPV)

Query: 2 KYISSAKN 9
KYI S KN
Sbjct: 47 KYIKSGKN 54


>sp|VTPX_TTV1K|VIRAL protein TPX|Thermoproteus tenax virus 1 (strain

Query: 2 KYISSAKNV 10
KYI+ A+NV
Sbjct: 169 KYINGAQNV 177






THE END