DPOG2_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|CARVAVRSRM

***** No hits found ******


2|SequenceR|15|6|RCVKHCARVA

>sp|COBD_AERPE|PROBABLE cobalamin biosynthesis protein CobD|Aeropyrum pernix (strain ATCC

Query: 1 RCVKHCARV 9
RC+ CAR+
Sbjct: 242 RCIARCARL 250


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 3 VKHCARV 9
V HCAR+
Sbjct: 126 VDHCARI 132


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 1 RCVKHCARVA 10
+CVK C A
Sbjct: 485 KCVKECPEAA 494


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 5 HCARVA 10
HC RVA
Sbjct: 104 HCGRVA 109


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 3 VKHCARVA 10
VK+CA++A
Sbjct: 150 VKYCAKLA 157


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 1 RCVKHCA 7
RC++ CA
Sbjct: 178 RCIEDCA 184


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 3 VKHCARV 9
V HCAR+
Sbjct: 125 VDHCARL 131


>sp|CAH_METJA|PROBABLE carbonic anhydrase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CVKHCAR 8
CV HC++
Sbjct: 51 CVVHCSK 57


>sp|HEM1_ARCFU|GLUTAMYL-TRNA reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CVKHCARVA 10
C++H RVA
Sbjct: 84 CLRHLLRVA 92




3|SequenceR|20|11|GSLLCRCVKH

>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 LLCRCV 8
LLCRCV
Sbjct: 31 LLCRCV 36


>sp|TRMY_METM7|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 LLCRCV 8
LLCRCV
Sbjct: 31 LLCRCV 36


>sp|TRMY_METM6|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 LLCRCV 8
LLCRCV
Sbjct: 31 LLCRCV 36


>sp|TRMY_HALLT|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halorubrum

Query: 3 LLCRCV 8
LLCRCV
Sbjct: 31 LLCRCV 36


>sp|TRMY_METJA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocaldococcus

Query: 3 LLCRCV 8
LLCRCV
Sbjct: 31 LLCRCV 36


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 1 GSLLCRC 7
G L CRC
Sbjct: 19 GKLFCRC 25


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 1 GSLLCRC 7
G L CRC
Sbjct: 16 GKLFCRC 22


>sp|TRMY_METVS|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 LLCRCV 8
L+CRCV
Sbjct: 31 LICRCV 36


>sp|TRMY_METMA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanosarcina mazei

Query: 3 LLCRCV 8
+LCRCV
Sbjct: 31 ILCRCV 36


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 LLCRCV 8
L+CRCV
Sbjct: 31 LICRCV 36


>sp|TRMY_METAC|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanosarcina

Query: 3 LLCRCV 8
+LCRCV
Sbjct: 31 ILCRCV 36


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 3 LLCRCV 8
L+CRCV
Sbjct: 31 LVCRCV 36


>sp|TRMY_HALVD|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloferax volcanii

Query: 3 LLCRCV 8
+LCRCV
Sbjct: 31 VLCRCV 36


>sp|TRMY_HALSA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halobacterium

Query: 3 LLCRCV 8
+LCRCV
Sbjct: 31 VLCRCV 36


>sp|TRMY_HALS3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halobacterium

Query: 3 LLCRCV 8
+LCRCV
Sbjct: 31 VLCRCV 36


>sp|TRMY_HALMA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloarcula marismortui

Query: 3 LLCRCV 8
+LCRCV
Sbjct: 31 VLCRCV 36


>sp|PDAD_METBU|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcoides burtonii (strain DSM 6242

Query: 5 CRCVK 9
CRCVK
Sbjct: 158 CRCVK 162


>sp|Y79A_METJA|UNCHARACTERIZED protein MJ0792.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSLLCRCV 8
GSL+CR +
Sbjct: 146 GSLVCRTI 153


>sp|TRMY_METLZ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocorpusculum

Query: 3 LLCRCV 8
+LCRC+
Sbjct: 31 VLCRCI 36


>sp|TRMY_METBU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcoides

Query: 3 LLCRCV 8
+LCRC+
Sbjct: 31 ILCRCI 36


>sp|MFNA_META3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus aeolicus (strain

Query: 4 LCRCVK 9
+C+CVK
Sbjct: 357 ICKCVK 362


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 3 LLCRCV 8
+LCRC+
Sbjct: 535 ILCRCL 540


>sp|TPIS_METBR|TRIOSEPHOSPHATE isomerase|Methanobacterium bryantii

Query: 1 GSLLCRCVK 9
GS+L CVK
Sbjct: 78 GSILPECVK 86


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 4 LCRCVK 9
LC+C+K
Sbjct: 293 LCKCLK 298


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 3 LLCRCVK 9
L CRC++
Sbjct: 382 LRCRCIR 388


>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSLLCRCVKH 10
G++LC C++
Sbjct: 15 GTVLCGCMEQ 24


>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SLLCRCV 8
S++C+C+
Sbjct: 389 SMICQCI 395


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CRCVKH 10
C CV H
Sbjct: 494 CNCVNH 499




4|SequenceR|25|16|VRGGFGSLLC

>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RGGFGSLLC 10
+G FG+LLC
Sbjct: 453 KGSFGALLC 461


>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 RGGFGSLLC 10
+G FG+LLC
Sbjct: 421 KGSFGALLC 429


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RGGFGSLLC 10
+G FG+LLC
Sbjct: 454 KGSFGALLC 462


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VRGGFG 6
VRGGFG
Sbjct: 272 VRGGFG 277


>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RGGFGSLL 9
RGGFGS+L
Sbjct: 30 RGGFGSVL 37


>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 RGGFGSLL 9
RGGFG ++
Sbjct: 201 RGGFGHIM 208


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VRGGFG 6
+RGGFG
Sbjct: 144 IRGGFG 149


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC

Query: 1 VRGGFGSLL 9
V GFGSLL
Sbjct: 54 VNTGFGSLL 62


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VRGGFGS 7
V GGFGS
Sbjct: 359 VAGGFGS 365


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VRGGFGS 7
V GGFGS
Sbjct: 359 VAGGFGS 365


>sp|RL15_STAMF|LARGE ribosomal subunit protein uL15|Staphylothermus marinus (strain

Query: 2 RGGFGSL 8
RGGFG++
Sbjct: 33 RGGFGAV 39


>sp|PYRK_ARCFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Archaeoglobus fulgidus

Query: 1 VRGGFGS 7
VRG FGS
Sbjct: 76 VRGAFGS 82


>sp|RL15_DESA1|LARGE ribosomal subunit protein uL15|Desulfurococcus amylolyticus

Query: 2 RGGFGSL 8
RGGFG++
Sbjct: 33 RGGFGAV 39


>sp|Y79A_METJA|UNCHARACTERIZED protein MJ0792.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FGSLLC 10
FGSL+C
Sbjct: 145 FGSLVC 150




5|SequenceR|30|21|PQGADVRGGF

>sp|Y584_METS5|UPF0282 protein Msed_0584|Metallosphaera sedula (strain ATCC 51363

Query: 1 PQGADVRGGF 10
P GADVR G+
Sbjct: 149 PHGADVRLGY 158


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PQGADVR 7
P+GADVR
Sbjct: 689 PEGADVR 695


>sp|EF1B_HALLT|ELONGATION factor 1-beta|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PQGADVRG 8
PQGA +RG
Sbjct: 31 PQGAKIRG 38


>sp|RL1_METMJ|LARGE ribosomal subunit protein uL1|Methanoculleus marisnigri (strain

Query: 1 PQGADVR 7
PQG D+R
Sbjct: 135 PQGMDIR 141


>sp|IDSA_METJA|SHORT chain isoprenyl diphosphate synthase|Methanocaldococcus jannaschii

Query: 1 PQGADVRGG 9
P G+D+R G
Sbjct: 232 PVGSDIREG 240


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 3 GADVRG 8
GADVRG
Sbjct: 416 GADVRG 421


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 3 GADVRG 8
GADVRG
Sbjct: 416 GADVRG 421


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PQGADVRG 8
PQ AD+ G
Sbjct: 412 PQNADIEG 419


>sp|RL14_ARCFU|LARGE ribosomal subunit protein uL14|Archaeoglobus fulgidus (strain ATCC

Query: 1 PQGADVRGGF 10
P+G+++RG
Sbjct: 104 PRGSEIRGAV 113


>sp|RL4_METKA|LARGE ribosomal subunit protein uL4|Methanopyrus kandleri (strain AV19

Query: 1 PQGADVRGGF 10
P G D R GF
Sbjct: 45 PYGTDPRAGF 54


>sp|RL14_AERPE|LARGE ribosomal subunit protein uL14|Aeropyrum pernix (strain ATCC 700893

Query: 1 PQGADVRG 8
P+G++VRG
Sbjct: 112 PRGSEVRG 119


>sp|RL14_SACS2|LARGE ribosomal subunit protein uL14|Saccharolobus solfataricus (strain

Query: 1 PQGADVRG 8
P+G +VRG
Sbjct: 110 PKGTEVRG 117


>sp|RL14_METVS|LARGE ribosomal subunit protein uL14|Methanococcus vannielii (strain ATCC

Query: 1 PQGADVRG 8
P+G+D++G
Sbjct: 104 PKGSDIKG 111


>sp|RL14_METVA|LARGE ribosomal subunit protein uL14|Methanococcus vannielii

Query: 1 PQGADVRG 8
P+G+D++G
Sbjct: 104 PKGSDIKG 111


>sp|RL14_METJA|LARGE ribosomal subunit protein uL14|Methanocaldococcus jannaschii

Query: 1 PQGADVRG 8
P+G+D++G
Sbjct: 104 PKGSDIKG 111


>sp|RL14_SULAC|LARGE ribosomal subunit protein uL14|Sulfolobus acidocaldarius (strain

Query: 1 PQGADVRG 8
P+G +VRG
Sbjct: 110 PKGTEVRG 117


>sp|RL14_METAC|LARGE ribosomal subunit protein uL14|Methanosarcina acetivorans (strain

Query: 1 PQGADVRG 8
P+G D++G
Sbjct: 104 PKGTDIKG 111


>sp|RL14_METMA|LARGE ribosomal subunit protein uL14|Methanosarcina mazei (strain ATCC

Query: 1 PQGADVRG 8
P+G D++G
Sbjct: 104 PKGTDIKG 111


>sp|RL14_METBF|LARGE ribosomal subunit protein uL14|Methanosarcina barkeri (strain

Query: 1 PQGADVRG 8
P+G D++G
Sbjct: 104 PKGTDIKG 111


>sp|RL14_THEKO|LARGE ribosomal subunit protein uL14|Thermococcus kodakarensis (strain

Query: 1 PQGADVRGGF 10
P+G ++RG
Sbjct: 113 PRGTEIRGAI 122


>sp|RL14_METBU|LARGE ribosomal subunit protein uL14|Methanococcoides burtonii (strain

Query: 1 PQGADVRG 8
P+G D++G
Sbjct: 104 PKGTDIKG 111


>sp|MOBDB_HALVD|PUTATIVE ABC transporter molybdenum-binding protein|Haloferax volcanii

Query: 1 PQGADVRGG 9
P G VRGG
Sbjct: 245 PDGVTVRGG 253


>sp|RL14_STAMF|LARGE ribosomal subunit protein uL14|Staphylothermus marinus (strain ATCC

Query: 1 PQGADVRG 8
P+G+++RG
Sbjct: 112 PKGSEIRG 119


>sp|RL14_METLZ|LARGE ribosomal subunit protein uL14|Methanocorpusculum labreanum (strain

Query: 1 PQGADVRG 8
P+G D++G
Sbjct: 104 PRGTDIKG 111




6|SequenceR|35|26|ETLLEPQGAD

>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ETLLEPQGAD 10
ETLLE GAD
Sbjct: 529 ETLLEKYGAD 538


>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 2 TLLEPQGAD 10
TLLEPQ D
Sbjct: 292 TLLEPQAVD 300


>sp|IXTPA_KORCO|DITP/XTP pyrophosphatase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 LEPQGAD 10
LEPQG D
Sbjct: 32 LEPQGED 38


>sp|ENO_METBU|ENOLASE burtonii (strain DSM 6242

Query: 1 ETLLEPQGAD 10
E +++P+GAD
Sbjct: 171 EFMIQPKGAD 180


>sp|ENO_METTP|ENOLASE thermoacetophila (strain DSM 6194

Query: 1 ETLLEPQGAD 10
E ++EP GAD
Sbjct: 163 EFMIEPWGAD 172


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 TLLEPQGAD 10
T L PQG D
Sbjct: 490 TALRPQGTD 498


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TLLEPQGAD 10
T L PQG D
Sbjct: 490 TALRPQGTD 498


>sp|PCNA2_SACS2|DNA polymerase sliding clamp 2|Saccharolobus solfataricus (strain ATCC

Query: 2 TLLEPQGAD 10
TLLE GAD
Sbjct: 183 TLLEASGAD 191


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TLLEPQGAD 10
T L PQG D
Sbjct: 490 TALRPQGTD 498


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 3 LLEPQGAD 10
L+EP+G D
Sbjct: 193 LIEPRGPD 200


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TLLEPQGAD 10
T L PQG D
Sbjct: 488 TALRPQGTD 496




7|SequenceR|40|31|KPSSRETLLE

>sp|SYY_PYRIL|TYROSINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KPSSRETLLE 10
KPSSRE L E
Sbjct: 235 KPSSREELSE 244


>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei (strain

Query: 2 PSSRETLL 9
P+SR TLL
Sbjct: 303 PASRSTLL 310


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 PSSRETLLE 10
P +RE LLE
Sbjct: 34 PEAREALLE 42


>sp|DPO4_METAC|DNA polymerase IV|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SSRETLLE 10
SS+ETLLE
Sbjct: 320 SSKETLLE 327


>sp|PDXT_METMJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoculleus marisnigri

Query: 4 SRETLLE 10
SRET+LE
Sbjct: 118 SRETMLE 124


>sp|SYY_PYRCJ|TYROSINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KPSSRETLLE 10
KPSS+E L E
Sbjct: 235 KPSSKEELSE 244


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 2 PSSRETLLE 10
PS RETL E
Sbjct: 571 PSLRETLEE 579




8|SequenceR|45|36|KVHGGKPSSR

>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GGKPSS 9
GGKPSS
Sbjct: 198 GGKPSS 203


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVHGGKP 7
K+H GKP
Sbjct: 194 KIHKGKP 200


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 1 KVHGGKPSSR 10
++HG KP R
Sbjct: 185 RLHGQKPGPR 194


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 2 VHGGKP 7
VHGG P
Sbjct: 538 VHGGDP 543


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KVHGGKPS 8
K++GGKP+
Sbjct: 83 KLNGGKPN 90


>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 2 VHGGKP 7
VHGG P
Sbjct: 540 VHGGDP 545


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 2 VHGGKP 7
VHGG P
Sbjct: 540 VHGGDP 545


>sp|SUCC2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 2 VHGGKPSS 9
++GGKP++
Sbjct: 269 IYGGKPAN 276


>sp|CHEB_METMP|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcus

Query: 1 KVHGGKPS 8
K+HG KP+
Sbjct: 271 KIHGTKPT 278


>sp|PSB1_IGNH4|PROTEASOME subunit beta 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 GGKPSSR 10
GGKPS R
Sbjct: 186 GGKPSIR 192


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VHGGKP 7
VHGG P
Sbjct: 540 VHGGDP 545


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 KVHGGKPS 8
KVH G P+
Sbjct: 986 KVHDGSPN 993


>sp|RPO11_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo11|Picrophilus torridus (strain ATCC

Query: 1 KVHGGKPSS 9
KV GKP S
Sbjct: 61 KVKSGKPQS 69


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 KVHGGKPS 8
KVH G P+
Sbjct: 986 KVHDGSPN 993


>sp|DPO4_METMJ|DNA polymerase IV|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VHGGKPSSR 10
VH G P SR
Sbjct: 60 VHSGMPISR 68


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 KVHGGKPS 8
KVH G P+
Sbjct: 987 KVHDGSPN 994




9|SequenceR|50|41|LEAHSKVHGG

>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 3 AHSKVHG 9
A SKVHG
Sbjct: 112 AESKVHG 118


>sp|RS15_NANEQ|SMALL ribosomal subunit protein uS15|Nanoarchaeum equitans (strain

Query: 1 LEAHSKVHG 9
L AH + HG
Sbjct: 4 LHAHKRYHG 12


>sp|MFNB_METM7|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 2 EAHSKVHGG 10
EAH + GG
Sbjct: 12 EAHEAIEGG 20


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 3 AHSKVHG 9
A SKVHG
Sbjct: 98 AESKVHG 104




10|SequenceR|55|46|EGNGELEAHS

>sp|G1PDH_METB6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoregula boonei (strain DSM 21154

Query: 1 EGNGELEAH 9
EGN LEAH
Sbjct: 147 EGNVSLEAH 155


>sp|XERA_THEON|TYROSINE recombinase XerA|Thermococcus onnurineus (strain NA1)

Query: 1 EGNGELEAHS 10
EG GEL+A S
Sbjct: 37 EGGGELKARS 46


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 2 GNGELEA 8
G GELEA
Sbjct: 562 GTGELEA 568


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 2 GNGELEA 8
G GELEA
Sbjct: 562 GTGELEA 568




11|SequenceR|60|51|PAEPHEGNGE

>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PAEPHEGNGE 10
P +PHEG E
Sbjct: 357 PLKPHEGKKE 366


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AEPHEGNGE 10
AEP +G GE
Sbjct: 22 AEPFDGKGE 30


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PAEPHEGNGE 10
P+ P+E N E
Sbjct: 200 PSPPYESNSE 209


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 1 PAEPHE 6
PAEPH+
Sbjct: 405 PAEPHK 410


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 3 EPHEGNG 9
EP +GNG
Sbjct: 78 EPEKGNG 84


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 3 EPHEGNGE 10
EPH+GN E
Sbjct: 156 EPHDGNVE 163


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PHEGNG 9
PHEG+G
Sbjct: 324 PHEGSG 329


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 1 PAEPHEGNGE 10
P E H G+G+
Sbjct: 116 PVEVHSGSGD 125


>sp|UPPS_ARCFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Archaeoglobus

Query: 3 EPHEGN 8
EPHEG+
Sbjct: 41 EPHEGH 46


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PAEPHEGNG 9
P EP EG G
Sbjct: 61 PGEPVEGTG 69


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 PAEPHEGNG 9
P EP EG G
Sbjct: 61 PGEPVEGTG 69


>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 1 PAEPHEGNG 9
P EP EG G
Sbjct: 58 PGEPVEGTG 66


>sp|ARFB_METFV|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermus fervidus (strain ATCC

Query: 4 PHEGNGE 10
PH G+GE
Sbjct: 154 PHAGSGE 160


>sp|AATA_THEKO|A-TYPE ATP synthase subunit A|Thermococcus kodakarensis (strain ATCC

Query: 1 PAEPHEGNG 9
P EP EG G
Sbjct: 58 PGEPVEGTG 66


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 1 PAEPHEGNG 9
P EP EG G
Sbjct: 58 PGEPVEGTG 66


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC

Query: 1 PAEPHEGNG 9
P EP EG G
Sbjct: 60 PGEPVEGTG 68


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PAEPHEGNG 9
P +P EG G
Sbjct: 159 PEKPREGGG 167


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 1 PAEPHEGNG 9
P EP EG G
Sbjct: 58 PGEPVEGTG 66


>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 1 PAEPHEGNG 9
PAE +EG G
Sbjct: 178 PAEVYEGQG 186


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 1 PAEPHEGNG 9
P EP EG G
Sbjct: 68 PGEPVEGTG 76


>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AEPHEGN 8
A+PHEG+
Sbjct: 186 AKPHEGS 192


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 PAEPHEGNGE 10
P EP +G GE
Sbjct: 63 PGEPVKGTGE 72


>sp|RS27_METMJ|SMALL ribosomal subunit protein eS27|Methanoculleus marisnigri (strain

Query: 2 AEPHEGNGE 10
AEPH G +
Sbjct: 44 AEPHGGKAD 52




12|SequenceR|65|56|GEGSGPAEPH

>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 2 EGSGPAEPH 10
EGSGP P+
Sbjct: 238 EGSGPTFPN 246


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 2 EGSGPAEPH 10
EG+GP + H
Sbjct: 220 EGAGPLDAH 228


>sp|Y1421_METMJ|UPF0173 metal-dependent hydrolase Memar_1421|Methanoculleus marisnigri

Query: 2 EGSGPAEP 9
EGS PAEP
Sbjct: 27 EGSLPAEP 34


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GEGSGPAE 8
G G+GPAE
Sbjct: 157 GGGTGPAE 164


>sp|MCH_METBF|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GEGSGPA 7
G GSGPA
Sbjct: 106 GMGSGPA 112


>sp|MCH_METMA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GEGSGPA 7
G GSGPA
Sbjct: 106 GMGSGPA 112


>sp|RS8E_METHJ|SMALL ribosomal subunit protein eS8|Methanospirillum hungatei JF-1

Query: 3 GSGPAEPH 10
GS PAE H
Sbjct: 28 GSAPAETH 35


>sp|MCH_METAC|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GEGSGPA 7
G GSGPA
Sbjct: 106 GMGSGPA 112


>sp|DHOM_METJA|HOMOSERINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GEGSGPAE 8
G G+GP E
Sbjct: 311 GRGAGPIE 318




13|SequenceR|70|61|LLAESGEGSG

>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LAESGEGS 9
LAE GEG+
Sbjct: 322 LAERGEGA 329


>sp|Y1082_METJA|UNCHARACTERIZED protein MJ1082|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LAESGEGS 9
L E+GEGS
Sbjct: 35 LLENGEGS 42


>sp|RRP4_AERPE|EXOSOME complex component Rrp4|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLAESGEGSG 10
LL E G+G G
Sbjct: 43 LLREKGDGGG 52


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 LLAESGEGS 9
L+AE GEG+
Sbjct: 570 LIAERGEGA 578




14|SequenceR|75|66|RQCIELLAES

>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri

Query: 1 RQCIELLAES 10
R+CI LAE+
Sbjct: 52 RECIGWLAET 61


>sp|RTCA_HALSA|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 3 CIELLAE 9
C++LLAE
Sbjct: 314 CVDLLAE 320


>sp|RTCA_HALS3|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 3 CIELLAE 9
C++LLAE
Sbjct: 314 CVDLLAE 320


>sp|MTAD_HALSA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Halobacterium salinarum (strain ATCC 700922

Query: 4 IELLAES 10
IELLAES
Sbjct: 256 IELLAES 262


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain

Query: 1 RQCIELLAES 10
++C E+LAE+
Sbjct: 27 KKCDEILAEA 36


>sp|Y1861_PYRAE|PUTATIVE ankyrin repeat protein PAE1861|Pyrobaculum aerophilum (strain ATCC

Query: 2 QCIELL 7
QC+ELL
Sbjct: 170 QCVELL 175


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 1 RQCIELLAES 10
R C+E+LAE
Sbjct: 45 RFCLEVLAEG 54




15|SequenceR|80|71|SLFHRRQCIE

>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 FHRRQCI 9
FHRR+C+
Sbjct: 18 FHRRECV 24


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 FHRRQCI 9
FHRR+C+
Sbjct: 18 FHRRECV 24


>sp|Y1304_METJA|PUTATIVE toxin MJ1304|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SLFHRRQCIE 10
S++H +QC+E
Sbjct: 37 SVYHSQQCVE 46


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SLFHRRQC 8
S FHR+QC
Sbjct: 10 SGFHRKQC 17


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 FHRRQC 8
FHR+QC
Sbjct: 18 FHRKQC 23


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 FHRRQCI 9
FHR++C+
Sbjct: 18 FHRQECV 24


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 3 FHRRQC 8
FHRR C
Sbjct: 88 FHRRYC 93


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FHRRQCIE 10
F R+QC E
Sbjct: 17 FERKQCTE 24


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 FHRRQCIE 10
F R+QC E
Sbjct: 17 FERKQCTE 24


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 FHRRQCIE 10
F R+QC E
Sbjct: 17 FERKQCTE 24


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 FHRRQCIE 10
F R+QC E
Sbjct: 17 FERKQCTE 24


>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 RRQCIE 10
RRQC+E
Sbjct: 212 RRQCLE 217


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 2 LFHRRQCIE 10
L+HRR+ +E
Sbjct: 354 LWHRREVLE 362


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 FHRRQCIE 10
F R+QC E
Sbjct: 17 FERKQCSE 24


>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 3 FHRRQCI 9
HR++CI
Sbjct: 127 LHRKECI 133


>sp|SFSA_METBU|SUGAR fermentation stimulation protein homolog|Methanococcoides

Query: 1 SLFHRR 6
S+FHRR
Sbjct: 92 SIFHRR 97


>sp|DPCKG_HYPBU|GTP-DEPENDENT dephospho-CoA kinase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LFHRRQCI 9
LFH R C+
Sbjct: 4 LFHSRLCL 11


>sp|TSR3_METBU|16S rRNA aminocarboxypropyltransferase|Methanococcoides burtonii

Query: 2 LFHRRQC 8
+FH +QC
Sbjct: 13 IFHAKQC 19




16|SequenceR|85|76|QQKSGSLFHR

>sp|PUR2_METMJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 SGSLFHR 10
SGS+FHR
Sbjct: 404 SGSVFHR 410


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QQKSGSLFHR 10
Q+K+G +FH+
Sbjct: 558 QKKNGIVFHK 567


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QQKSGSLFHR 10
Q+K+G +FH+
Sbjct: 558 QKKNGIVFHK 567


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 QQKSGSLFHR 10
Q+K+G +FH+
Sbjct: 558 QKKNGIVFHK 567


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 QQKSGSLFHR 10
Q+K+G +FH+
Sbjct: 558 QKKNGIVFHK 567


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 QQKSGSLFHR 10
Q+K+G +FH+
Sbjct: 558 QKKNGIVFHK 567


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QKSGSLFH 9
+K+G +FH
Sbjct: 66 EKNGEIFH 73




17|SequenceR|90|81|SDRSLQQKSG

>sp|Y1656_METJA|UNCHARACTERIZED protein MJ1656|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RSLQQKSG 10
R LQQK G
Sbjct: 126 RDLQQKDG 133




18|SequenceR|95|86|CGSLLSDRSL

>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CGSLLSDRSL 10
CG LL+ RSL
Sbjct: 159 CGRLLTPRSL 168


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GSLLSDRSL 10
GS++SD+SL
Sbjct: 798 GSVMSDQSL 806


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GSLLSDRSL 10
GS+LSD+++
Sbjct: 9 GSILSDKNV 17


>sp|PGMI_AERPE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Aeropyrum pernix (strain

Query: 1 CGSLLS 6
CGSLLS
Sbjct: 95 CGSLLS 100




19|SequenceR|100|91|GFGPHCGSLL

>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 2 FGPHCGSLL 10
FG +CG+LL
Sbjct: 430 FGSYCGNLL 438


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GFGPHCGSL 9
G PHCG++
Sbjct: 142 GICPHCGAV 150


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GFGPHCGSL 9
G PHCG++
Sbjct: 142 GICPHCGAV 150


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 4 PHCGS 8
PHCGS
Sbjct: 148 PHCGS 152


>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 4 PHCGSLL 10
P CGSLL
Sbjct: 151 PRCGSLL 157


>sp|PANB_PYRCJ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GFGPHC 6
G GPHC
Sbjct: 205 GAGPHC 210


>sp|PANB_PYRAR|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GFGPHC 6
G GPHC
Sbjct: 203 GAGPHC 208


>sp|PANB_PYRAE|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GFGPHC 6
G GPHC
Sbjct: 202 GAGPHC 207


>sp|PANB_METS5|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GFGPHC 6
G GPHC
Sbjct: 199 GAGPHC 204


>sp|NPD_THEKO|NAD-DEPENDENT protein deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PHCGSLL 10
P CGSLL
Sbjct: 152 PKCGSLL 158


>sp|NPD_PYRHO|NAD-DEPENDENT protein deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PHCGSLL 10
P CGSLL
Sbjct: 151 PKCGSLL 157


>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PHCGSLL 10
P CGSLL
Sbjct: 151 PKCGSLL 157


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GFGPHCGSLL 10
G GP GSLL
Sbjct: 52 GNGPQVGSLL 61


>sp|PANB_PYRNV|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GFGPHC 6
G GPHC
Sbjct: 201 GSGPHC 206


>sp|PANB_PYRIL|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GFGPHC 6
G GPHC
Sbjct: 201 GSGPHC 206


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 4 PHCGSLL 10
PHCG+ L
Sbjct: 447 PHCGTQL 453


>sp|TFS_SULAC|TRANSCRIPTION factor S|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FGPHCGSLL 10
F P CGS++
Sbjct: 3 FCPKCGSMM 11


>sp|Y1165_HALMA|UPF0212 protein rrnAC1165|Haloarcula marismortui (strain ATCC 43049

Query: 4 PHCGSLL 10
PHCG L
Sbjct: 51 PHCGETL 57


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FGPHCGSLL 10
+ P+CG+LL
Sbjct: 294 YCPNCGALL 302


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFGPHCGSL 9
G P+CG+L
Sbjct: 138 GICPYCGAL 146


>sp|TFE_HYPBU|TRANSCRIPTION factor E|Hyperthermus butylicus (strain DSM 5456

Query: 4 PHCGSLL 10
P CGS+L
Sbjct: 137 PRCGSML 143


>sp|RL18_METVS|LARGE ribosomal subunit protein uL18|Methanococcus vannielii (strain

Query: 1 GFGPHCGSL 9
G+ HCG+L
Sbjct: 71 GYKGHCGNL 79


>sp|RL18_METVA|LARGE ribosomal subunit protein uL18|Methanococcus vannielii

Query: 1 GFGPHCGSL 9
G+ HCG+L
Sbjct: 73 GYKGHCGNL 81


>sp|RL18_METMP|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 1 GFGPHCGSL 9
G+ HCG+L
Sbjct: 71 GYKGHCGNL 79


>sp|RL18_METM7|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 1 GFGPHCGSL 9
G+ HCG+L
Sbjct: 71 GYKGHCGNL 79


>sp|RL18_METM6|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 1 GFGPHCGSL 9
G+ HCG+L
Sbjct: 71 GYKGHCGNL 79


>sp|RL18_METM5|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 1 GFGPHCGSL 9
G+ HCG+L
Sbjct: 71 GYKGHCGNL 79


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GFGPHCGSL 9
G PHCG +
Sbjct: 145 GSCPHCGEI 153


>sp|TFS_THEKO|TRANSCRIPTION factor S|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FGPHCGSLL 10
F P CG+L+
Sbjct: 3 FCPKCGNLM 11


>sp|TFS_THECE|TRANSCRIPTION factor S|Thermococcus celer

Query: 2 FGPHCGSLL 10
F P CG+L+
Sbjct: 3 FCPKCGNLM 11


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GFGPHCGSLL 10
G GP GS+L
Sbjct: 56 GIGPFAGSVL 65


>sp|Y1264_HALSA|UPF0212 protein VNG_1264C|Halobacterium salinarum (strain ATCC 700922

Query: 4 PHCGS 8
PHCG+
Sbjct: 51 PHCGT 55


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 4 PHCGSL 9
PHCG +
Sbjct: 150 PHCGEI 155


Query: 4 PHCGSL 9
PHCG +
Sbjct: 103 PHCGRV 108


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PHCGS 8
PHCG+
Sbjct: 200 PHCGA 204


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 4 PHCGS 8
PHCG+
Sbjct: 151 PHCGA 155


>sp|Y1890_THEKO|UNCHARACTERIZED protein TK1890|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GPHCGSL 9
GP+CG +
Sbjct: 91 GPYCGGI 97


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GFGPHCG 7
G PHCG
Sbjct: 149 GACPHCG 155


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 4 PHCGSLL 10
PHC S L
Sbjct: 669 PHCNSYL 675


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 4 PHCGSL 9
PHCG +
Sbjct: 150 PHCGEV 155


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 4 PHCGSL 9
PHCG +
Sbjct: 150 PHCGEV 155


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 4 PHCGSL 9
PHCG +
Sbjct: 103 PHCGKV 108


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 4 PHCGS 8
PHCG+
Sbjct: 217 PHCGN 221


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FGPHCGSLL 10
FG +CG+ L
Sbjct: 430 FGSYCGNAL 438


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GFGPHCG 7
G PHCG
Sbjct: 149 GACPHCG 155


>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GFGPHCGSLL 10
G GP G+LL
Sbjct: 52 GNGPQVGALL 61


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PHCGS 8
PHCG+
Sbjct: 217 PHCGN 221


>sp|TPIS_ARCFU|TRIOSEPHOSPHATE isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFGPHCGSL 9
GFG H G +
Sbjct: 69 GFGSHTGRI 77


>sp|Y1513_PYRHO|UNCHARACTERIZED protein PH1513|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GPHCGSL 9
GP+CG +
Sbjct: 92 GPYCGGV 98


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PHCGS 8
PHCG+
Sbjct: 217 PHCGN 221


>sp|HYPA_META3|HYDROGENASE maturation factor HypA|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 PHCGSL 9
P CGSL
Sbjct: 97 PECGSL 102


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 4 PHCGS 8
PHCG+
Sbjct: 262 PHCGA 266


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FGPHCG 7
FGPH G
Sbjct: 275 FGPHVG 280


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 FGPHCG 7
FGPH G
Sbjct: 275 FGPHVG 280


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain

Query: 2 FGPHCGS 8
F P+CG+
Sbjct: 6 FDPYCGA 12


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 4 PHCG 7
PHCG
Sbjct: 255 PHCG 258


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 4 PHCG 7
PHCG
Sbjct: 258 PHCG 261


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PHCG 7
PHCG
Sbjct: 476 PHCG 479


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 4 PHCG 7
PHCG
Sbjct: 147 PHCG 150


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 4 PHCG 7
PHCG
Sbjct: 147 PHCG 150


>sp|RIFK_SULTO|RIBOFLAVIN kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GFGPHCGSL 9
GF P+ G+L
Sbjct: 37 GFEPYAGTL 45


>sp|Y656_PYRAB|UNCHARACTERIZED protein PYRAB06560|Pyrococcus abyssi (strain GE5 /

Query: 3 GPHCG 7
GP+CG
Sbjct: 89 GPYCG 93


>sp|Y1536_PYRFU|UNCHARACTERIZED protein PF1536|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GPHCG 7
GP+CG
Sbjct: 89 GPYCG 93


>sp|RS27A_SULAC|SMALL ribosomal subunit protein eS31|Sulfolobus acidocaldarius (strain

Query: 4 PHCGSLL 10
P CGS++
Sbjct: 36 PRCGSIM 42


>sp|RS27A_SACS2|SMALL ribosomal subunit protein eS31|Saccharolobus solfataricus (strain

Query: 4 PHCGSLL 10
P CGS++
Sbjct: 42 PRCGSIM 48


>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FGPHC 6
+GPHC
Sbjct: 364 WGPHC 368


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 4 PHCG 7
PHCG
Sbjct: 62 PHCG 65


>sp|RS27A_AERPE|SMALL ribosomal subunit protein eS31|Aeropyrum pernix (strain ATCC

Query: 4 PHCGSLL 10
P CGS++
Sbjct: 32 PRCGSIM 38


>sp|RTCA_METTP|RNA 3'-terminal phosphate cyclase|Methanothrix thermoacetophila (strain

Query: 5 HCGSL 9
HCGSL
Sbjct: 190 HCGSL 194


>sp|RS27A_SULTO|SMALL ribosomal subunit protein eS31|Sulfurisphaera tokodaii (strain

Query: 4 PHCGSLL 10
P CGS++
Sbjct: 32 PRCGSIM 38




20|SequenceR|105|96|EVGLPGFGPH

>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 1 EVGLPGFGP 9
E+G PG GP
Sbjct: 399 EIGEPGLGP 407


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VGLPGFGPH 10
+G P FGP
Sbjct: 81 IGFPPFGPQ 89


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 EVGLPGFGPH 10
E+G+P G H
Sbjct: 207 EIGIPDLGAH 216


>sp|FEN_CALMQ|FLAP endonuclease 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 GLPGFGPH 10
G+PG GP
Sbjct: 246 GIPGIGPQ 253


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VGLPGFGPH 10
+G P FGP
Sbjct: 84 LGFPPFGPQ 92


>sp|FEN_PYRAR|FLAP endonuclease 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GLPGFGPH 10
G+PG GP
Sbjct: 244 GVPGIGPQ 251


>sp|FEN_PYRAE|FLAP endonuclease 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GLPGFGPH 10
G+PG GP
Sbjct: 244 GVPGVGPQ 251


>sp|FEN_METKA|FLAP endonuclease 1|Methanopyrus kandleri (strain AV19 /

Query: 3 GLPGFGP 9
G+PG GP
Sbjct: 239 GVPGIGP 245


>sp|FEN_PYRIL|FLAP endonuclease 1|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GLPGFGPH 10
G+PG GP
Sbjct: 244 GVPGVGPQ 251


>sp|FEN_PYRNV|FLAP endonuclease 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GLPGFGPH 10
G+PG GP
Sbjct: 244 GVPGVGPQ 251


>sp|FEN_PYRCJ|FLAP endonuclease 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GLPGFGPH 10
G+PG GP
Sbjct: 244 GVPGVGPQ 251


>sp|VHOC_METMA|F420 non-reducing hydrogenase I cytochrome|Methanosarcina mazei (strain

Query: 2 VGLPGFGPH 10
VG+ GF PH
Sbjct: 212 VGILGFDPH 220


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 VGLPGFGPH 10
+G P F PH
Sbjct: 49 IGSPVFAPH 57


>sp|RS4_ARCFU|SMALL ribosomal subunit protein uS4|Archaeoglobus fulgidus (strain ATCC

Query: 1 EVGLPG 6
E+GLPG
Sbjct: 61 EIGLPG 66


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 GLPGFGP 9
G+PG GP
Sbjct: 239 GVPGVGP 245


>sp|RL37_IGNH4|LARGE ribosomal subunit protein eL37|Ignicoccus hospitalis (strain

Query: 3 GLPGFGPH 10
G P FG H
Sbjct: 4 GTPSFGKH 11


>sp|FEN_HALSA|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 GLPGFGP 9
G+ GFGP
Sbjct: 230 GIDGFGP 236


>sp|FEN_HALS3|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 29341

Query: 3 GLPGFGP 9
G+ GFGP
Sbjct: 230 GIDGFGP 236


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 EVGLPGFGPH 10
E G+P FGP
Sbjct: 89 EEGIPTFGPK 98


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 2 VGLPGF 7
VGLPG+
Sbjct: 301 VGLPGY 306


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EVGLPGFGP 9
E G+P GP
Sbjct: 83 EAGIPSVGP 91


>sp|PUR2_METM6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C6 /

Query: 1 EVGLPGFGP 9
E+G+P GP
Sbjct: 86 EMGIPTVGP 94


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EVGLPGFGP 9
E+G+P GP
Sbjct: 86 EMGIPTVGP 94


>sp|PUR2_METM5|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C5 /

Query: 1 EVGLPGFGP 9
E+G+P GP
Sbjct: 86 EMGIPTVGP 94


>sp|PUR2_METM7|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C7 /

Query: 1 EVGLPGFGP 9
E+G+P GP
Sbjct: 86 EMGIPTVGP 94


>sp|PUR2_METMP|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EVGLPGFGP 9
E+G+P GP
Sbjct: 86 EMGIPTVGP 94


>sp|Y130_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 1 EVGLPGF 7
EVGL GF
Sbjct: 121 EVGLEGF 127


>sp|PIMT_METAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GLPGFGPH 10
GLP F P+
Sbjct: 112 GLPDFAPY 119


>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium

Query: 2 VGLPGFG 8
VGL GFG
Sbjct: 8 VGLNGFG 14


>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EVGLPGFGPH 10
E+GL GF H
Sbjct: 149 ELGLDGFEVH 158


>sp|CDPAS_METMA|CDP-ARCHAEOL synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VGLPGFGPH 10
+ +PGFGP
Sbjct: 69 IEMPGFGPD 77


>sp|ATGT_HALSA|TRNA-GUANINE(15) transglycosylase|Halobacterium salinarum (strain ATCC 700922

Query: 4 LPGFGPH 10
LP FGP+
Sbjct: 415 LPPFGPY 421


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 4 LPGFGPH 10
LP FGP+
Sbjct: 414 LPPFGPY 420


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVGLPGFGP 9
E G+P GP
Sbjct: 92 EEGIPAVGP 100


>sp|PURQ_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothrix thermoacetophila (strain DSM

Query: 4 LPGFGP 9
+PG+GP
Sbjct: 240 IPGYGP 245




21|SequenceR|110|101|LNKRLEVGLP

>sp|TRUD_HALMA|PROBABLE tRNA pseudouridine synthase D|Haloarcula marismortui (strain ATCC

Query: 1 LNKRLEVGLP 10
L++RLE GLP
Sbjct: 310 LSERLERGLP 319


>sp|GGR_METS3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LNKRLEVGLP 10
L+KR E+G P
Sbjct: 32 LDKRSEIGAP 41


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 1 LNKRLEVGLP 10
+NK L +GLP
Sbjct: 688 INKSLALGLP 697


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LNKRLEVGLP 10
LNKR E G P
Sbjct: 264 LNKRYETGDP 273


>sp|TRUD_THEKO|PROBABLE tRNA pseudouridine synthase D|Thermococcus kodakarensis (strain

Query: 1 LNKRLEVGLP 10
L++R+E GLP
Sbjct: 272 LSRRIEEGLP 281


>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NKRLEVGLP 10
N+R++VG P
Sbjct: 328 NRRMKVGRP 336


>sp|TRUD_PYRAB|PROBABLE tRNA pseudouridine synthase D|Pyrococcus abyssi (strain GE5 /

Query: 1 LNKRLEVGLP 10
L++R+E GLP
Sbjct: 264 LSRRIEEGLP 273


>sp|TRUD_PYRFU|PROBABLE tRNA pseudouridine synthase D|Pyrococcus furiosus (strain ATCC

Query: 1 LNKRLEVGLP 10
L++R+E GLP
Sbjct: 265 LSRRIEEGLP 274


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NKRLEVGLP 10
NK LE+ LP
Sbjct: 441 NKELEIDLP 449


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LNKRLEVGLP 10
LN+R E G P
Sbjct: 264 LNRRYEAGDP 273


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 1 LNKRLEVGLP 10
++K +EVG P
Sbjct: 114 MDKAMEVGAP 123


>sp|RL11_THEGJ|LARGE ribosomal subunit protein uL11|Thermococcus gammatolerans (strain

Query: 4 RLEVGLP 10
R+EVG+P
Sbjct: 65 RIEVGIP 71


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKRLEVGLP 10
N +EVG+P
Sbjct: 501 NGNIEVGIP 509


>sp|TRUD_THEON|PROBABLE tRNA pseudouridine synthase D|Thermococcus onnurineus (strain NA1)

Query: 1 LNKRLEVGLP 10
+++R+E GLP
Sbjct: 272 ISRRIEEGLP 281


>sp|RL11_THEON|LARGE ribosomal subunit protein uL11|Thermococcus onnurineus (strain

Query: 4 RLEVGLP 10
R+EVG+P
Sbjct: 65 RIEVGVP 71


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 1 LNKRLEVGLP 10
L +R+E G+P
Sbjct: 282 LCRRIEAGIP 291




22|SequenceR|115|106|WWEAALNKRL

>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 WWEAALNKR 9
WW ++KR
Sbjct: 453 WWHENVDKR 461


>sp|RS10_PYRNV|SMALL ribosomal subunit protein uS10|Pyrobaculum neutrophilum (strain

Query: 2 WEAALNKRL 10
WE ++KRL
Sbjct: 69 WEMRISKRL 77


>sp|RS10_PYRAE|SMALL ribosomal subunit protein uS10|Pyrobaculum aerophilum (strain

Query: 2 WEAALNKRL 10
WE ++KRL
Sbjct: 69 WEMRISKRL 77


>sp|RS10_PYRAR|SMALL ribosomal subunit protein uS10|Pyrobaculum arsenaticum (strain

Query: 2 WEAALNKRL 10
WE ++KRL
Sbjct: 69 WEMRISKRL 77


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WEAALNKRL 10
WE+ L+K+L
Sbjct: 554 WESGLSKKL 562


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 2 WEAALNKR 9
WEAAL R
Sbjct: 243 WEAALRLR 250


>sp|RS10_THEVO|SMALL ribosomal subunit protein uS10|Thermoplasma volcanium (strain

Query: 2 WEAALNKRL 10
WE ++KRL
Sbjct: 66 WEMRIHKRL 74


>sp|RS10_PYRIL|SMALL ribosomal subunit protein uS10|Pyrobaculum islandicum (strain DSM

Query: 2 WEAALNKRL 10
WE ++KRL
Sbjct: 69 WELRISKRL 77


>sp|RS10_PYRCJ|SMALL ribosomal subunit protein uS10|Pyrobaculum calidifontis (strain

Query: 2 WEAALNKRL 10
WE ++KRL
Sbjct: 69 WELRISKRL 77


>sp|RS10_THEAC|SMALL ribosomal subunit protein uS10|Thermoplasma acidophilum (strain

Query: 2 WEAALNKRL 10
WE ++KRL
Sbjct: 66 WEMRIHKRL 74


>sp|RS10_PYRAB|SMALL ribosomal subunit protein uS10|Pyrococcus abyssi (strain GE5 /

Query: 2 WEAALNKRL 10
WE ++KRL
Sbjct: 64 WELRIHKRL 72


>sp|RS10_PYRHO|SMALL ribosomal subunit protein uS10|Pyrococcus horikoshii (strain ATCC

Query: 2 WEAALNKRL 10
WE ++KRL
Sbjct: 64 WELRIHKRL 72


>sp|RS10_PYRWO|SMALL ribosomal subunit protein uS10|Pyrococcus woesei

Query: 2 WEAALNKRL 10
WE ++KRL
Sbjct: 64 WELRVHKRL 72


>sp|RS10_PYRFU|SMALL ribosomal subunit protein uS10|Pyrococcus furiosus (strain ATCC

Query: 2 WEAALNKRL 10
WE ++KRL
Sbjct: 64 WELRVHKRL 72


>sp|Y1254_METJA|UNCHARACTERIZED protein MJ1254|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WEAALNKRL 10
W+ +LNK +
Sbjct: 214 WDLSLNKEI 222


>sp|RS10_PICTO|SMALL ribosomal subunit protein uS10|Picrophilus torridus (strain ATCC

Query: 2 WEAALNKRL 10
WE ++KRL
Sbjct: 65 WEMRVHKRL 73


>sp|RL31_META3|LARGE ribosomal subunit protein eL31|Methanococcus aeolicus (strain

Query: 2 WEAALNK 8
WE +LNK
Sbjct: 55 WERSLNK 61




23|SequenceR|120|111|VVVSTWWEAA

>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 VSTWWEAA 10
+ +WWE
Sbjct: 187 IESWWEGG 194


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VSTWWEAA 10
+ +WWE
Sbjct: 185 IESWWEGG 192


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 VSTWWEAA 10
+ +WWE
Sbjct: 187 IESWWEGG 194


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 VSTWWEAA 10
+ +WWE
Sbjct: 187 IESWWEGG 194


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 VSTWWEAA 10
+ +WWE
Sbjct: 187 IESWWEGG 194


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 VSTWWEAA 10
+ +WWE
Sbjct: 187 IESWWEGG 194


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VVSTWWEA 9
VVS +WEA
Sbjct: 92 VVSDFWEA 99


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 VSTWWEAA 10
+ +WWE
Sbjct: 187 IESWWEGG 194


>sp|HMEC_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus

Query: 5 TWWEAA 10
TWWE A
Sbjct: 64 TWWETA 69


>sp|PYRH_PYRFU|URIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVVSTWWEA 9
VVV +WEA
Sbjct: 91 VVVEDFWEA 99


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 2 VVSTWWEAA 10
VVS W EAA
Sbjct: 543 VVSDWKEAA 551


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 4 STWWEAA 10
+ WW AA
Sbjct: 132 TPWWRAA 138


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 4 STWWEAA 10
+ WW AA
Sbjct: 132 TPWWRAA 138


>sp|SRP19_METBU|SIGNAL recognition particle 19 kDa|Methanococcoides burtonii (strain DSM

Query: 5 TWWEAA 10
TWWE++
Sbjct: 62 TWWESS 67




24|SequenceR|125|116|VQERFVVVST

>sp|KTHY_METBU|PROBABLE thymidylate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 ERFVVVST 10
ERFVV+ T
Sbjct: 173 ERFVVIDT 180


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VQERFVVVST 10
+QERFV V T
Sbjct: 164 MQERFVKVIT 173


>sp|Y675_METJA|UNCHARACTERIZED protein MJ0675|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VQERFVVVST 10
++ERF V+ST
Sbjct: 237 LKERFDVIST 246


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 1 VQERFVVVST 10
+QERFV V T
Sbjct: 164 MQERFVRVIT 173




25|SequenceR|130|121|ADVPFVQERF

>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ADVPFVQE 8
ADVPFV E
Sbjct: 248 ADVPFVLE 255


>sp|RS2_META3|SMALL ribosomal subunit protein uS2|Methanococcus aeolicus (strain ATCC

Query: 2 DVPFVQERF 10
DVPF E F
Sbjct: 186 DVPFTYEEF 194


>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ADVPFVQER 9
A +P+V+ER
Sbjct: 264 ASLPYVRER 272


>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 2 DVPFVQER 9
D+P+ QE+
Sbjct: 71 DIPYTQEQ 78


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 1 ADVPFV 6
ADVPF+
Sbjct: 110 ADVPFI 115


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ADVPFVQERF 10
AD+ VQER+
Sbjct: 260 ADIRVVQERW 269


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ADVPFVQERF 10
AD P+ ++RF
Sbjct: 157 ADTPYDEKRF 166


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 2 DVPFVQE 8
D+PF QE
Sbjct: 385 DMPFTQE 391


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 2 DVPFVQE 8
D+PF QE
Sbjct: 385 DMPFTQE 391


>sp|EF1A_METS3|ELONGATION factor 1-alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ADVPFV 6
ADVPF+
Sbjct: 167 ADVPFI 172




26|SequenceR|135|126|PKHHLADVPF

>sp|HTPX_SACI1|PROTEASE HtpX homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PKHHLADVPF 10
PK ++ADVPF
Sbjct: 102 PKVYIADVPF 111


>sp|HTPX2_SACS2|PROTEASE HtpX homolog 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PKHHLADVPF 10
PK ++ADVPF
Sbjct: 102 PKVYIADVPF 111


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 1 PKHHLADVP 9
P+HH+ DVP
Sbjct: 349 PQHHVTDVP 357


>sp|TBP_PYRNV|TATA-BOX-BINDING protein|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KHHLADVPF 10
K H ADVPF
Sbjct: 87 KDHGADVPF 95


>sp|TBP_PYRAE|TATA-BOX-BINDING protein|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KHHLADVPF 10
K H ADVPF
Sbjct: 87 KDHGADVPF 95


>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 HHLADVPF 10
HHLAD+ F
Sbjct: 200 HHLADLVF 207


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 1 PKHHLADVP 9
PK HL VP
Sbjct: 218 PKMHLISVP 226


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 PKHHLADVP 9
PK HL VP
Sbjct: 217 PKMHLISVP 225


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 1 PKHHLADVP 9
PK HL VP
Sbjct: 223 PKMHLISVP 231


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 PKHHLADVP 9
PK HL VP
Sbjct: 223 PKMHLISVP 231


>sp|GVPE2_HALSA|TRANSCRIPTIONAL activator GvpE2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PKHHLADVPF 10
P HH D P
Sbjct: 49 PPHHYTDTPL 58


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PKHHLADVP 9
PK HL ++P
Sbjct: 222 PKLHLIEIP 230


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 1 PKHHLADVPF 10
P +AD+PF
Sbjct: 407 PYSRMADLPF 416


>sp|Y1435_PYRAB|UNCHARACTERIZED protein PYRAB14350|Pyrococcus abyssi (strain GE5 /

Query: 1 PKHHLADVP 9
P HL D+P
Sbjct: 46 PYSHLLDIP 54


>sp|PURA_ARCFU|ADENYLOSUCCINATE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KHHLADVPF 10
K +LADVP
Sbjct: 150 KDYLADVPL 158


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PKHHLADVP 9
PK HL +P
Sbjct: 224 PKEHLIAIP 232


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PKHHLADVP 9
PK HL VP
Sbjct: 223 PKVHLIQVP 231


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 KHHLAD 7
KHH+AD
Sbjct: 531 KHHIAD 536


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 1 PKHHLADVPF 10
P H+ D+PF
Sbjct: 161 PDHNWYDLPF 170


>sp|GATC_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Methanococcoides burtonii (strain DSM

Query: 1 PKHHLADV 8
P +H+AD+
Sbjct: 50 PTYHVADI 57


>sp|TRUA_THEKO|TRNA pseudouridine synthase A|Thermococcus kodakarensis (strain ATCC

Query: 3 HHLADV 8
HHL+DV
Sbjct: 83 HHLSDV 88


>sp|DHAS_ARCFU|ASPARTATE-SEMIALDEHYDE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PKHHLADVPF 10
PKH AD+ F
Sbjct: 70 PKHVDADIVF 79




27|SequenceR|140|131|PLLPGPKHHL

>sp|AGL10_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl10|Haloferax volcanii

Query: 1 PLLPGPKHHL 10
P LPG +H+L
Sbjct: 156 PALPGKEHNL 165


>sp|FRHD_METJA|COENZYME F420 hydrogenase subunit delta|Methanocaldococcus jannaschii

Query: 3 LPGPKHH 9
LP PK+H
Sbjct: 112 LPNPKYH 118


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 3 LPGPKH 8
LPGP+H
Sbjct: 233 LPGPQH 238


>sp|RS5_ARCFU|SMALL ribosomal subunit protein uS5|Archaeoglobus fulgidus (strain ATCC

Query: 2 LLPGPK 7
L+PGPK
Sbjct: 141 LIPGPK 146


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 2 LLPGPK 7
+LPGPK
Sbjct: 71 VLPGPK 76


>sp|IPK_THEAC|ISOPENTENYL phosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LPGPKH 8
LPGPK+
Sbjct: 58 LPGPKN 63


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LLPGPKHH 9
+LPG KH+
Sbjct: 411 ILPGRKHY 418


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LLPGPKHH 9
+LPG KH+
Sbjct: 411 ILPGRKHY 418


>sp|MTD_METVS|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 PLLPGPK 7
P PGPK
Sbjct: 70 PAAPGPK 76


>sp|WECB_METJA|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LPGPKHHL 10
LP PK++L
Sbjct: 53 LPNPKYNL 60


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LLPGPKHH 9
+LPG KH+
Sbjct: 411 ILPGRKHY 418


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LLPGPKHH 9
+LPG KH+
Sbjct: 411 ILPGRKHY 418


>sp|MTD_METM5|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 PLLPGPK 7
P PGPK
Sbjct: 71 PAAPGPK 77


>sp|MTD_METM7|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 PLLPGPK 7
P PGPK
Sbjct: 71 PAAPGPK 77


>sp|MTD_METMP|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 PLLPGPK 7
P PGPK
Sbjct: 71 PAAPGPK 77


>sp|MTD_METJA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanocaldococcus

Query: 1 PLLPGPK 7
P PGPK
Sbjct: 71 PAAPGPK 77




28|SequenceR|145|136|FASDGPLLPG

>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FASDGPLLPG 10
F S GP+LPG
Sbjct: 139 FVSGGPMLPG 148


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 FASDGPLLPG 10
F S GP+LPG
Sbjct: 139 FISGGPMLPG 148


>sp|DAPF_METKA|DIAMINOPIMELATE epimerase|Methanopyrus kandleri (strain AV19 /

Query: 3 SDGPLLPG 10
SDGPLL G
Sbjct: 231 SDGPLLIG 238


>sp|THSB_HALSA|THERMOSOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 3 SDGPLLPG 10
SDG +LPG
Sbjct: 405 SDGRVLPG 412


>sp|DHQS_METHJ|3-DEHYDROQUINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ASDGPLLPG 10
A DG L+PG
Sbjct: 45 APDGDLIPG 53


>sp|HIS5_METMA|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina mazei (strain

Query: 1 FASDGPLLPG 10
A+DG +LPG
Sbjct: 38 LAADGIILPG 47


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 3 SDGPLLPG 10
+ GP+LPG
Sbjct: 141 TGGPMLPG 148


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 3 SDGPLLPG 10
+ GP+LPG
Sbjct: 141 TGGPMLPG 148


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 5 GPLLPG 10
GPL+PG
Sbjct: 138 GPLVPG 143


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 3 SDGPLLPG 10
+ GP+LPG
Sbjct: 141 TGGPMLPG 148


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 3 SDGPLLPG 10
+ GP+LPG
Sbjct: 141 TGGPMLPG 148


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 3 SDGPLLPG 10
+ GP+LPG
Sbjct: 141 TGGPMLPG 148


>sp|DHQS_METB6|3-DEHYDROQUINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 ASDGPLLPG 10
A DG L+PG
Sbjct: 45 APDGDLVPG 53


>sp|MTAD_HALMA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ASDGPLLPG 10
ASDG ++PG
Sbjct: 49 ASDGLVIPG 57


>sp|ILVD_METVS|DIHYDROXY-ACID dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 3 SDGPLLPG 10
+ GP+LPG
Sbjct: 141 TGGPMLPG 148


>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 4 DGPLLP 9
DGP+LP
Sbjct: 192 DGPMLP 197


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 SDGPLLPG 10
+ GP+LPG
Sbjct: 141 TGGPMLPG 148


>sp|HIS5_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri

Query: 1 FASDGPLLPG 10
A+DG +LPG
Sbjct: 38 LAADGLILPG 47


>sp|DHYS_METTH|PROBABLE deoxyhypusine synthase|Methanothermobacter thermautotrophicus

Query: 5 GPLLPG 10
GPL+PG
Sbjct: 59 GPLVPG 64


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 SDGPLLPG 10
+ GP++PG
Sbjct: 141 TGGPMMPG 148


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SDGPLLPG 10
+ GP+LPG
Sbjct: 141 TGGPMLPG 148


>sp|GLK_PYRCJ|GLUCOKINASE calidifontis (strain DSM 21063

Query: 2 ASDGPLLP 9
A +GPLLP
Sbjct: 183 AGEGPLLP 190


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 3 SDGPLLPG 10
+ GP+LPG
Sbjct: 141 TGGPMLPG 148


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 ASDGPLLPG 10
+SDG +PG
Sbjct: 490 SSDGAFIPG 498


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SDGPLLPG 10
+ GP+LPG
Sbjct: 141 TGGPMLPG 148


>sp|HIS5_NATPD|IMIDAZOLE glycerol phosphate synthase subunit|Natronomonas pharaonis

Query: 2 ASDGPLLPG 10
A+DG +LPG
Sbjct: 45 AADGIVLPG 53


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SDGPLLPG 10
+ GP+LPG
Sbjct: 141 TGGPMLPG 148


>sp|HIS5_HALMA|IMIDAZOLE glycerol phosphate synthase subunit|Haloarcula marismortui

Query: 2 ASDGPLLPG 10
A+DG +LPG
Sbjct: 45 AADGIVLPG 53


>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ASDGPLLPG 10
A DG ++PG
Sbjct: 154 AEDGTVMPG 162


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 SDGPLLPG 10
+ GP+LPG
Sbjct: 141 TGGPMLPG 148


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ASDGPLL 8
ASDGPL
Sbjct: 80 ASDGPLF 86


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ASDGPLL 8
ASDGPL
Sbjct: 80 ASDGPLF 86


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 3 SDGPLL 8
SDGPLL
Sbjct: 448 SDGPLL 453


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FASDGPLLPG 10
+ GP+LPG
Sbjct: 139 VVTGGPMLPG 148


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 3 SDGPLL 8
SDGPLL
Sbjct: 395 SDGPLL 400


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 GPLLPG 10
GP++PG
Sbjct: 143 GPMMPG 148




29|SequenceR|150|141|ASVLRFASDG

>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 ASVLRFASDG 10
A++LRF DG
Sbjct: 396 AAILRFKPDG 405


>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 VLRFASDG 10
+LRF++DG
Sbjct: 65 LLRFSADG 72




30|SequenceR|155|146|ERLTEASVLR

>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 1 ERLTEASVLR 10
E+L EASV R
Sbjct: 124 EKLKEASVTR 133




31|SequenceR|160|151|KDQLIERLTE

>sp|HMDH_ARCFU|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KDQLIERLTE 10
KD++IER E
Sbjct: 151 KDEIIERANE 160


>sp|FLAD_METJA|PUTATIVE flagella-related protein D|Methanocaldococcus jannaschii (strain

Query: 2 DQLIERLTE 10
D+++ER+TE
Sbjct: 60 DKIVERITE 68


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 KDQLIERLTE 10
+D+L+ERL E
Sbjct: 564 EDELVERLAE 573


>sp|KAD_NATPD|ADENYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KDQLIERLT 9
+D+L++RLT
Sbjct: 111 RDELVDRLT 119


>sp|CDC62_METTH|ORC1-TYPE DNA replication protein 2|Methanothermobacter thermautotrophicus

Query: 2 DQLIERLTE 10
D+L+ER+T+
Sbjct: 235 DELLERITD 243


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KDQLIERL 8
KDQ+ ERL
Sbjct: 134 KDQICERL 141


>sp|CDC6A_HALMA|ORC1-TYPE DNA replication protein 1|Haloarcula marismortui (strain ATCC

Query: 2 DQLIERLTE 10
D+LIER TE
Sbjct: 26 DRLIERDTE 34


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DQLIERL 8
D+LIERL
Sbjct: 5 DELIERL 11


>sp|UBIX_ARCFU|FLAVIN prenyltransferase UbiX|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QLIERLTE 10
+LIE+LTE
Sbjct: 18 RLIEKLTE 25


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KDQLIERL 8
KD ++ERL
Sbjct: 814 KDHIVERL 821


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 2 DQLIERLTE 10
D+L+ERL E
Sbjct: 274 DKLMERLKE 282


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KDQLIERL 8
K QLIERL
Sbjct: 295 KSQLIERL 302


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 2 DQLIERLTE 10
D+L+ R+TE
Sbjct: 333 DELLNRVTE 341




32|SequenceR|165|156|EKSLEKDQLI

>sp|MSRA_METM7|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 1 EKSLEKDQ 8
EKSLEK Q
Sbjct: 112 EKSLEKMQ 119


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKSLEKDQL 9
EK++EKD +
Sbjct: 204 EKTIEKDNM 212




33|SequenceR|170|161|FAVLQEKSLE

>sp|FEN_METAC|FLAP endonuclease 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AVLQEKSLE 10
AVL+EK +E
Sbjct: 261 AVLREKDME 269


>sp|GATA_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 2 AVLQEKSLE 10
+ L+EKSLE
Sbjct: 245 SALEEKSLE 253




34|SequenceR|175|166|LVNELFAVLQ

***** No hits found ******


35|SequenceR|180|171|KGSTKLVNEL

>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC

Query: 2 GSTKLVNE 9
GSTKL+N+
Sbjct: 19 GSTKLIND 26


>sp|PDXT_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaera stadtmanae

Query: 2 GSTKLVNEL 10
G+TKLVN L
Sbjct: 31 GTTKLVNTL 39


>sp|PURT_SULAC|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfolobus

Query: 3 STKLVNEL 10
+TK+VNEL
Sbjct: 257 ATKVVNEL 264


>sp|RTCA_PYRCJ|RNA 3'-terminal phosphate cyclase|Pyrobaculum calidifontis (strain

Query: 1 KGSTKLV 7
KGST+LV
Sbjct: 68 KGSTRLV 74




36|SequenceR|185|176|LNERLKGSTK

>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LNERLKGSTK 10
NERLKG T+
Sbjct: 272 FNERLKGKTR 281


>sp|MALF_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 1 LNERLKG 7
LNERLKG
Sbjct: 100 LNERLKG 106


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 ERLKGSTK 10
ER+KGS K
Sbjct: 585 ERIKGSDK 592


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 1 LNERLKGSTK 10
LNE++KG K
Sbjct: 442 LNEKIKGIAK 451


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LNERLKGSTK 10
LNERLK S +
Sbjct: 245 LNERLKESIE 254


>sp|PSB2_PYRFU|PROTEASOME subunit beta 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LNERLKGST 9
L E+LKG+T
Sbjct: 4 LKEKLKGTT 12


>sp|PYRB_PYRIL|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum islandicum

Query: 3 ERLKGSTK 10
ER+KGS K
Sbjct: 239 ERIKGSYK 246


>sp|PSB1_THEKO|PROTEASOME subunit beta 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LNERLKGST 9
+ E+LKG+T
Sbjct: 1 MTEKLKGTT 9




37|SequenceR|190|181|LAGHLLNERL

>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LAGHLLNERL 10
L G L+NERL
Sbjct: 282 LVGLLMNERL 291


>sp|Y686_METJA|UNCHARACTERIZED protein MJ0686|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAGHLLNERL 10
L GH +NE +
Sbjct: 531 LKGHFINEEM 540


>sp|CFBC_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 1 LAGHLLNERL 10
+A HL +ERL
Sbjct: 251 MASHLSDERL 260


>sp|CBIF_METJA|COBALT-PRECORRIN-4 C(11)-methyltransferase|Methanocaldococcus jannaschii (strain

Query: 2 AGHLLNERL 10
AG L+NE+L
Sbjct: 37 AGSLVNEKL 45


>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAGHLLNERL 10
LAGHL +E
Sbjct: 217 LAGHLYSEEF 226


>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAGHLLN 7
++GHLLN
Sbjct: 379 VSGHLLN 385


>sp|PGK_THEAC|PHOSPHOGLYCERATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 HLLNERL 10
HLLN+R+
Sbjct: 81 HLLNKRV 87


>sp|KCY_METTP|CYTIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LAGHLLNERL 10
LAGH+L+ L
Sbjct: 82 LAGHMLDADL 91




38|SequenceR|195|186|NVYHELAGHL

>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NVYHELAGH 9
++YHE+ G+
Sbjct: 72 DIYHEIIGN 80


>sp|ARTE_METJA|PROBABLE archaeosortase E|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VYHELAGH 9
+YHE+AG+
Sbjct: 147 LYHEIAGY 154


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 3 YHELAGH 9
+H+L GH
Sbjct: 33 FHDLTGH 39


>sp|OTC_METM5|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C5 /

Query: 4 HELAGH 9
HEL GH
Sbjct: 59 HELGGH 64


>sp|DHYS_METTH|PROBABLE deoxyhypusine synthase|Methanothermobacter thermautotrophicus

Query: 4 HELAGHL 10
HE+ GHL
Sbjct: 158 HEIGGHL 164


>sp|GATA_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 1 NVYHELAGH 9
N+Y +AGH
Sbjct: 183 NLYSVIAGH 191


>sp|OTC_METM7|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C7 /

Query: 4 HELAGH 9
HEL GH
Sbjct: 59 HELGGH 64


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 2 VYHELAGH 9
V H +AGH
Sbjct: 71 VLHRIAGH 78




39|SequenceR|200|191|VLDLCNVYHE

>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 3 DLCNVYH 9
DLCNVY+
Sbjct: 622 DLCNVYN 628


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 VLDLCNVYHE 10
+LDLCN E
Sbjct: 408 ILDLCNADEE 417


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 DLCNVYH 9
D+C VYH
Sbjct: 303 DVCPVYH 309


>sp|GATC_METTP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Methanothrix thermoacetophila (strain

Query: 1 VLDLCNVYHE 10
V+DL NV+ E
Sbjct: 54 VVDLANVFRE 63


>sp|DAPA_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VLDLCNV 7
+LD+CN+
Sbjct: 172 ILDICNI 178


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VLDLCNV 7
++DLCNV
Sbjct: 468 LMDLCNV 474


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLDLCNVYH 9
V ++C+VYH
Sbjct: 299 VPEVCSVYH 307


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 3 DLCNVYH 9
DLCNV++
Sbjct: 382 DLCNVHN 388


>sp|Y525_METKA|UNCHARACTERIZED protein MK0525|Methanopyrus kandleri (strain AV19 /

Query: 1 VLDLCNVYHE 10
V DLC Y E
Sbjct: 157 VCDLCETYSE 166


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LDLCNVYHE 10
LDL NV+ E
Sbjct: 155 LDLINVFEE 163


>sp|CDC63_SULTO|ORC1-TYPE DNA replication protein 3|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DLCNVYHE 10
DLCN Y +
Sbjct: 317 DLCNQYKQ 324


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 VLDLCNVYH 9
V+D C VY+
Sbjct: 378 VVDTCEVYY 386


>sp|CDC63_SULAC|ORC1-TYPE DNA replication protein 3|Sulfolobus acidocaldarius (strain ATCC

Query: 3 DLCNVYHE 10
DLCN Y +
Sbjct: 317 DLCNEYKQ 324


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LDLCNVYHE 10
LDL +VY E
Sbjct: 111 LDLLDVYRE 119


>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 DLCNVYH 9
D+C V+H
Sbjct: 303 DICPVFH 309


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VLDLCNVYH 9
V +CN YH
Sbjct: 467 VCPVCNKYH 475


>sp|DAPA_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 VLDLCNV 7
VLD CN+
Sbjct: 172 VLDSCNI 178


>sp|DAPA_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 VLDLCNV 7
VLD CN+
Sbjct: 172 VLDSCNI 178


>sp|DAPA_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 VLDLCNV 7
VLD CN+
Sbjct: 172 VLDSCNI 178


>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 2 LDLCNVYHE 10
L+LCN Y E
Sbjct: 161 LNLCNKYIE 169




40|SequenceR|205|196|PLRKNVLDLC

>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PLRKNVLDLC 10
P+RK +LC
Sbjct: 74 PMRKGFFELC 83


>sp|SURE1_PYRAE|5'-NUCLEOTIDASE SurE 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PLRKNVLDLC 10
PLR +DLC
Sbjct: 50 PLRMYEVDLC 59


>sp|CBIG_METJA|PROBABLE cobalt-precorrin-5A hydrolase|Methanocaldococcus jannaschii (strain

Query: 1 PLRKNVLDL 9
P RK++LD+
Sbjct: 135 PKRKHILDI 143


>sp|KAD_METBU|ADENYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PLRKNVLDLC 10
P ++NV D C
Sbjct: 143 PKKENVCDAC 152




41|SequenceR|210|201|QALGYPLRKN

>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 QALGYP 6
QALGYP
Sbjct: 526 QALGYP 531


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ALGYPLRKN 10
++ YPLRK+
Sbjct: 524 SIAYPLRKD 532


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ALGYPLRKN 10
++G+PLR N
Sbjct: 327 SIGFPLRNN 335


>sp|HMGCS_CALMQ|HYDROXYMETHYLGLUTARYL-COA synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 QALGYPLRK 9
Q LG+PL K
Sbjct: 247 QMLGFPLEK 255


>sp|HCGF_METTW|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanothermobacter

Query: 2 ALGYPLRKN 10
++GYPL N
Sbjct: 23 SMGYPLNYN 31


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 ALGYPLRKN 10
+LGYP R++
Sbjct: 553 SLGYPRRED 561


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 5 YPLRKN 10
+PLRKN
Sbjct: 183 FPLRKN 188


>sp|SECD_HALVD|PROTEIN-EXPORT membrane protein SecD|Haloferax volcanii (strain ATCC 29605

Query: 2 ALGYPL 7
A+GYPL
Sbjct: 414 AIGYPL 419




42|SequenceR|215|206|FCVGIQALGY

>sp|TRPG_SACS2|ANTHRANILATE synthase component 2|Saccharolobus solfataricus (strain ATCC

Query: 2 CVGIQALGY 10
C+G QA+GY
Sbjct: 84 CLGHQAIGY 92


>sp|BIOF_METJA|PUTATIVE 8-amino-7-oxononanoate synthase|Methanocaldococcus jannaschii

Query: 1 FCVGIQ 6
FCVGI+
Sbjct: 329 FCVGIR 334


>sp|BIOF_META3|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus aeolicus (strain ATCC

Query: 1 FCVGIQ 6
FCVGI+
Sbjct: 334 FCVGIR 339


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 VGIQALGY 10
+G+QAL Y
Sbjct: 121 IGVQALDY 128


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CVGIQALG 9
C G QALG
Sbjct: 330 CGGYQALG 337


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 3 VGIQALGY 10
+G+ +LGY
Sbjct: 422 IGVDSLGY 429




43|SequenceR|220|211|DFVPHFCVGI

>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 1 DFVPHFCVGI 10
D+VP FC G+
Sbjct: 245 DYVPRFCSGL 254


>sp|TF2B_METMZ|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 DFVPHFCVGI 10
D+VP FC G+
Sbjct: 248 DYVPRFCSGL 257


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DFVPHFCVGI 10
D+VP FC G+
Sbjct: 248 DYVPRFCSGL 257


>sp|TF2B_METMA|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DFVPHFCVGI 10
D+VP FC G+
Sbjct: 248 DYVPRFCSGL 257


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 1 DFVPHFCVGI 10
D+VP FC G+
Sbjct: 245 DYVPRFCSGL 254


>sp|TF2B_METAC|TRANSCRIPTION initiation factor IIB|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DFVPHFCVGI 10
D+VP FC G+
Sbjct: 248 DYVPRFCSGL 257


>sp|TF2B_METTP|TRANSCRIPTION initiation factor IIB|Methanothrix thermoacetophila (strain DSM

Query: 1 DFVPHFCVGI 10
D++P FC G+
Sbjct: 248 DYIPRFCSGL 257


>sp|THPR_METTH|RNA 2',3'-cyclic phosphodiesterase|Methanothermobacter

Query: 1 DFVPHFCVG 9
D+VPH VG
Sbjct: 123 DYVPHLTVG 131


>sp|Y2166_ARCFU|UNCHARACTERIZED protein AF_2166|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FVPHFC 7
FVPHFC
Sbjct: 142 FVPHFC 147


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DFVPHFCVGI 10
D++P FC +
Sbjct: 237 DYIPRFCAAL 246


>sp|Y1675_ARCFU|UNCHARACTERIZED protein AF_1675|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FVPHFCVG 9
FVP FC G
Sbjct: 98 FVPVFCTG 105


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DFVPHFC 7
D +PHFC
Sbjct: 36 DDLPHFC 42


>sp|AROE_SULTO|SHIKIMATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DFVPHFCV 8
DFVP CV
Sbjct: 186 DFVPDECV 193


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FVPHFC 7
F PH C
Sbjct: 774 FTPHLC 779


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FVPHFC 7
F PH C
Sbjct: 774 FTPHLC 779


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FVPHFC 7
F PH C
Sbjct: 774 FTPHLC 779


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FVPHFC 7
F PH C
Sbjct: 774 FTPHLC 779


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFVPHF 6
D+VPH+
Sbjct: 161 DYVPHY 166


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FVPHFC 7
F PH C
Sbjct: 797 FTPHIC 802


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FVPHFC 7
F PH C
Sbjct: 797 FTPHIC 802


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 FVPHFC 7
F PH C
Sbjct: 797 FTPHIC 802


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 FVPHFC 7
F PH C
Sbjct: 770 FTPHIC 775


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 FVPHFC 7
F PH C
Sbjct: 773 FTPHIC 778


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FVPHFC 7
F PH C
Sbjct: 766 FAPHIC 771




44|SequenceR|225|216|RIQKTDFVPH

>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IQKTDFVPH 10
I KTD PH
Sbjct: 152 INKTDLAPH 160


>sp|UREG_NATPD|UREASE accessory protein UreG|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IQKTDFVPH 10
+ KTD PH
Sbjct: 152 VNKTDLAPH 160


>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 2 IQKTDFVPH 10
+ KTD PH
Sbjct: 154 VNKTDLAPH 162


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KTDFVPH 10
KT+F PH
Sbjct: 258 KTNFKPH 264


>sp|Y045_METJA|UNCHARACTERIZED protein MJ0045|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RIQKTDF 7
RI+KTD+
Sbjct: 201 RIEKTDY 207


>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IQKTDFVP 9
+ +TDF+P
Sbjct: 128 LDETDFIP 135


>sp|PRIL_HALSA|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 1 RIQKTDFVPH 10
++Q+ D +PH
Sbjct: 244 QVQRGDHLPH 253


>sp|PRIL_HALS3|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 1 RIQKTDFVPH 10
++Q+ D +PH
Sbjct: 244 QVQRGDHLPH 253




45|SequenceR|230|221|SKVGNRIQKT

>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SKVGNRIQK 9
SK+GN+++K
Sbjct: 456 SKIGNKVKK 464


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KVGNRIQK 9
KVGN+++K
Sbjct: 455 KVGNKVEK 462




46|SequenceR|235|226|TKEGISKVGN

>sp|DHYS_HALSA|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 KEGISKVGN 10
+EGI+++GN
Sbjct: 132 EEGINRLGN 140


>sp|DHYS_HALS3|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 KEGISKVGN 10
+EGI+++GN
Sbjct: 132 EEGINRLGN 140


>sp|TRUA_PYRNV|TRNA pseudouridine synthase A|Pyrobaculum neutrophilum (strain DSM

Query: 1 TKEGISKVGN 10
T G+S VGN
Sbjct: 42 TDPGVSAVGN 51


>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM

Query: 1 TKEGISKVGN 10
T G+S VGN
Sbjct: 42 TDPGVSAVGN 51


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC

Query: 1 TKEGISKVGN 10
T G+S VGN
Sbjct: 42 TDPGVSAVGN 51


>sp|DHYS_PYRFU|PROBABLE deoxyhypusine synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KEGISKVGN 10
K+GI+++GN
Sbjct: 131 KKGINRIGN 139


>sp|TRUA_PYRHO|TRNA pseudouridine synthase A|Pyrococcus horikoshii (strain ATCC

Query: 1 TKEGISKVGN 10
T +G+S +GN
Sbjct: 50 TDKGVSALGN 59


>sp|MFNA_METS3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanobrevibacter smithii

Query: 2 KEGISKVG 9
KEG+ K+G
Sbjct: 310 KEGLEKIG 317


>sp|GRPE_METTH|PROTEIN GrpE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 TKEGISKV 8
TKEG+S++
Sbjct: 113 TKEGLSEI 120




47|SequenceR|240|231|VLSAETKEGI

>sp|IF2P_HALMA|PROBABLE translation initiation factor IF-2|Haloarcula marismortui (strain

Query: 2 LSAETKEGI 10
+SAET EGI
Sbjct: 206 VSAETSEGI 214


>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VLSAETKEGI 10
+LS E+KEG+
Sbjct: 31 LLSLESKEGL 40


>sp|MOAC_METAC|PROBABLE cyclic pyranopterin monophosphate synthase|Methanosarcina

Query: 1 VLSAETKEGI 10
VLSAET E I
Sbjct: 38 VLSAETMEKI 47


>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 2 LSAETKEG 9
LSA+T+EG
Sbjct: 222 LSAKTREG 229


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 1 VLSAETKEGI 10
++S ET+EG+
Sbjct: 381 IISTETEEGM 390


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 2 LSAETKEGI 10
+SAET EG+
Sbjct: 207 VSAETGEGV 215


>sp|MOAC_METMA|PROBABLE cyclic pyranopterin monophosphate synthase|Methanosarcina mazei

Query: 1 VLSAETKEGI 10
VLSAET E I
Sbjct: 35 VLSAETLEKI 44


>sp|NUCS_SACS2|ENDONUCLEASE NucS|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VLSAETKEG 9
+ SAE KEG
Sbjct: 110 ITSAEVKEG 118




48|SequenceR|245|236|PPTFWVLSAE

>sp|RS8E_SACS2|SMALL ribosomal subunit protein eS8|Saccharolobus solfataricus (strain

Query: 1 PPTFWVLSAE 10
PPTF LSAE
Sbjct: 31 PPTFTTLSAE 40


>sp|TRUA_METMA|TRNA pseudouridine synthase A|Methanosarcina mazei (strain ATCC

Query: 1 PPTFWV 6
PPT WV
Sbjct: 85 PPTIWV 90


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 PPTFW 5
PP+FW
Sbjct: 338 PPSFW 342


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 PPTFW 5
PPT+W
Sbjct: 332 PPTYW 336


>sp|RS8E_AERPE|SMALL ribosomal subunit protein eS8|Aeropyrum pernix (strain ATCC

Query: 1 PPTFWVLSA 9
PPT+ LSA
Sbjct: 32 PPTYTTLSA 40


>sp|BACH_HALHM|HALORHODOPSIN halobium (strain mex)

Query: 2 PTFWVLSAE 10
P FW L AE
Sbjct: 181 PIFWALGAE 189


>sp|GATD_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus solfataricus (strain ATCC

Query: 2 PTFWVLSAE 10
P FWV AE
Sbjct: 151 PEFWVKIAE 159


>sp|GATD_METS5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Metallosphaera sedula (strain ATCC 51363

Query: 2 PTFWVLSAE 10
P FWV AE
Sbjct: 147 PEFWVKIAE 155


>sp|BACH_HALSD|HALORHODOPSIN sodomense

Query: 2 PTFWVLSAE 10
P FW L AE
Sbjct: 215 PIFWALGAE 223


>sp|BACH_HALSS|HALORHODOPSIN sp. (strain SG1)

Query: 2 PTFWVLSAE 10
P FW L AE
Sbjct: 216 PIFWALGAE 224


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PTFWVL 7
PTFWV
Sbjct: 308 PTFWVF 313


>sp|Y1969_ARCFU|PROTEIN AF_1969|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPTFWVLSAE 10
PP W+ AE
Sbjct: 165 PPDCWLTGAE 174


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPTFW 5
PP FW
Sbjct: 109 PPLFW 113




49|SequenceR|250|241|QNSTRPPTFW

>sp|Y3409_METJA|UNCHARACTERIZED protein MJECS09|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QNSTRPPTF 9
+NS +PP+F
Sbjct: 24 KNSVKPPSF 32


>sp|TRUA_METMA|TRNA pseudouridine synthase A|Methanosarcina mazei (strain ATCC

Query: 2 NSTRPPTFW 10
NS PPT W
Sbjct: 81 NSGLPPTIW 89


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NSTRPPTFW 10
N RP T+W
Sbjct: 481 NPERPETYW 489


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 QNSTRPPTFW 10
+++TRP FW
Sbjct: 119 ESATRPIEFW 128


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 5 RPPTFW 10
+PP+FW
Sbjct: 337 QPPSFW 342


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 5 RPPTFW 10
RPP+ W
Sbjct: 327 RPPSLW 332


>sp|HTPX_THEVO|PROTEASE HtpX homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NSTRPPTFW 10
N RPPT +
Sbjct: 99 NGIRPPTLY 107


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NSTRPPTFW 10
N PP FW
Sbjct: 105 NVASPPLFW 113


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NSTRPPTFW 10
N RP FW
Sbjct: 488 NPERPERFW 496


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 6 PPTFW 10
PPT+W
Sbjct: 332 PPTYW 336


>sp|TRUA_METAC|TRNA pseudouridine synthase A|Methanosarcina acetivorans (strain ATCC

Query: 2 NSTRPPTFW 10
NS PP W
Sbjct: 81 NSELPPAIW 89


>sp|BACR2_HALS2|ARCHAERHODOPSIN-2 sp. (strain aus-2)

Query: 2 NSTRPPTFW 10
N RP T W
Sbjct: 14 NDGRPETLW 22




50|SequenceR|255|246|WFDLWQNSTR

>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 WFDLWQNSTR 10
W DLW+ +R
Sbjct: 282 WEDLWKGDSR 291


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WFDLW 5
WFD+W
Sbjct: 273 WFDVW 277


>sp|Y730_METJA|UNCHARACTERIZED protein MJ0730|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WFDLWQ 6
W+ LWQ
Sbjct: 47 WYKLWQ 52


>sp|Y1612_HALMA|UNCHARACTERIZED protein rrnAC1612|Haloarcula marismortui (strain ATCC 43049

Query: 2 FDLWQNS 8
FDLW N+
Sbjct: 249 FDLWLNT 255


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 1 WFDLWQNST 9
W DLW N +
Sbjct: 282 WNDLWLNES 290


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WFDLWQNST 9
W DLW N +
Sbjct: 287 WDDLWLNES 295


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 WFDLWQNST 9
W DLW N +
Sbjct: 287 WNDLWLNES 295


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 WFDLWQNST 9
W DLW N +
Sbjct: 281 WNDLWLNES 289


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WFDLWQNST 9
W DLW N +
Sbjct: 286 WDDLWLNES 294


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 1 WFDLWQNST 9
W DLW N +
Sbjct: 287 WNDLWLNES 295


>sp|PGP1_SACS2|PHOSPHOGLYCOLATE phosphatase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DLWQNSTR 10
D WQN R
Sbjct: 100 DTWQNEYR 107


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WFDLWQNST 9
W DLW N +
Sbjct: 288 WDDLWLNES 296


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WFDLWQNST 9
W DLW N +
Sbjct: 289 WDDLWLNES 297


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 1 WFDLWQNSTR 10
W++ W+ + R
Sbjct: 56 WYEPWKETMR 65


>sp|SYN_THEKO|ASPARAGINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WFDLW 5
W DLW
Sbjct: 229 WMDLW 233


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WFDLWQNST 9
WFD+ N+T
Sbjct: 291 WFDVDVNNT 299


>sp|SYN_THEGJ|ASPARAGINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WFDLW 5
W DLW
Sbjct: 229 WMDLW 233


>sp|SYN_PYRFU|ASPARAGINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WFDLW 5
W DLW
Sbjct: 233 WMDLW 237


>sp|SYN_PYRHO|ASPARAGINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WFDLW 5
W DLW
Sbjct: 233 WMDLW 237


>sp|SYN_PYRAB|ASPARAGINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 WFDLW 5
W DLW
Sbjct: 233 WMDLW 237


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 WFDLWQNS 8
W D W+N+
Sbjct: 28 WADSWRNN 35




51|SequenceR|260|251|LRHRLWFDLW

>sp|HIS7_PYRFU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LRHRLWFDL 9
LRH LW D+
Sbjct: 50 LRHHLWEDI 58


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RHRLWFDLW 10
R WFD+W
Sbjct: 269 RKNGWFDVW 277


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HRLWFD 8
HR+WFD
Sbjct: 64 HRIWFD 69


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 2 RHRLWFDLW 10
R WFD W
Sbjct: 148 RANRWFDTW 156


>sp|PTH_PYRFU|PEPTIDYL-TRNA hydrolase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RHRLWFDLW 10
+ R WF+ W
Sbjct: 40 KKREWFEAW 48


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 2 RHRLWF 7
RHR WF
Sbjct: 632 RHREWF 637


>sp|PTH_PYRHO|PEPTIDYL-TRNA hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RHRLWFDLW 10
+ R WF+ W
Sbjct: 42 KKREWFEAW 50


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LRHRLWFD 8
L H WFD
Sbjct: 15 LEHHKWFD 22


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 3 HRLWFDLW 10
HR+ D+W
Sbjct: 324 HRMGLDIW 331


>sp|Y1060_METJA|UNCHARACTERIZED protein MJ1060|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LRHRLWFDLW 10
L+H+L F LW
Sbjct: 285 LKHKLPFVLW 294


>sp|Y1094_METJA|UNCHARACTERIZED protein MJ1094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HRLWFDL 9
HR WF+
Sbjct: 300 HRKWFEF 306


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 6 WFDLW 10
W+D W
Sbjct: 153 WYDYW 157


>sp|PTH_PYRAB|PEPTIDYL-TRNA hydrolase|Pyrococcus abyssi (strain GE5 /

Query: 4 RLWFDLW 10
R WF+ W
Sbjct: 41 REWFEKW 47


>sp|Y079_METJA|UNCHARACTERIZED protein MJ0079|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LRHRLWFDL 9
LRH W D+
Sbjct: 267 LRHIFWDDI 275


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RHRLWFDLW 10
RH + F LW
Sbjct: 283 RHMVTFTLW 291


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LRHRLWFDLW 10
L H L+ D W
Sbjct: 55 LAHELYGDAW 64




52|SequenceR|265|256|KRWWQLRHRL

>sp|G1PDH_PYRNV|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RWWQLRHRL 10
R WQL HRL
Sbjct: 169 RDWQLAHRL 177


>sp|G1PDH_PYRCJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RWWQLRHRL 10
R WQL HRL
Sbjct: 166 RDWQLAHRL 174


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RWWQLRHRL 10
R WQL HRL
Sbjct: 169 RDWQLAHRL 177


>sp|G1PDH_PYRAE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RWWQLRHRL 10
R WQL HRL
Sbjct: 169 RDWQLAHRL 177


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 2 RWWQLRHRL 10
R WQL HRL
Sbjct: 181 RDWQLAHRL 189


>sp|G1PDH_STAMF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Staphylothermus marinus (strain ATCC 43588

Query: 4 WQLRHRL 10
WQL HRL
Sbjct: 186 WQLAHRL 192


>sp|G1PDH_NATPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Natronomonas pharaonis (strain ATCC 35678

Query: 4 WQLRHRL 10
WQL HRL
Sbjct: 183 WQLAHRL 189


>sp|G1PDH_METS3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanobrevibacter smithii (strain ATCC

Query: 4 WQLRHRL 10
WQL HRL
Sbjct: 179 WQLAHRL 185


>sp|G1PDH_HALWD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloquadratum walsbyi (strain DSM 16790

Query: 4 WQLRHRL 10
WQL HRL
Sbjct: 179 WQLAHRL 185


>sp|G1PDH_THEKO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus kodakarensis (strain ATCC

Query: 2 RWWQLRHRL 10
R WQL HR+
Sbjct: 181 RDWQLAHRI 189


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRWWQ 5
K+WWQ
Sbjct: 389 KKWWQ 393


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 2 RWWQLRH 8
RWW + H
Sbjct: 277 RWWGIEH 283


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 RWWQL 6
RWWQL
Sbjct: 379 RWWQL 383


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 RWWQL 6
RWWQL
Sbjct: 375 RWWQL 379


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RWWQL 6
RWWQL
Sbjct: 370 RWWQL 374


>sp|G1PDH_PYRIL|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RWWQLRHRL 10
R W+L HRL
Sbjct: 169 RDWKLAHRL 177


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 RWWQL 6
RWWQL
Sbjct: 375 RWWQL 379


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 4 WQLRHRL 10
W+L HRL
Sbjct: 193 WELSHRL 199


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 RWWQL 6
RWWQL
Sbjct: 375 RWWQL 379


>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 1 KRWWQLRHR 9
+ WWQL R
Sbjct: 245 RTWWQLTVR 253


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 RWWQL 6
RWWQL
Sbjct: 375 RWWQL 379


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 RWWQL 6
RWWQL
Sbjct: 375 RWWQL 379


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 2 RWWQL 6
RWWQL
Sbjct: 375 RWWQL 379


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 RWWQL 6
RWWQL
Sbjct: 375 RWWQL 379


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 WQLRHRL 10
W+L HRL
Sbjct: 192 WELAHRL 198


>sp|TRM14_ARCFU|TRNA (guanine(6)-N2)-methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 KRWWQL 6
KRWW++
Sbjct: 191 KRWWRV 196


>sp|COFD_METMA|2-PHOSPHO-L-LACTATE transferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KRWWQLRH 8
KRWW + +
Sbjct: 61 KRWWGIEN 68


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 RWWQL 6
RWWQL
Sbjct: 371 RWWQL 375


>sp|G1PDH_THEVO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma volcanium (strain ATCC 51530

Query: 4 WQLRHRL 10
W+L HRL
Sbjct: 184 WKLAHRL 190


>sp|G1PDH_THEAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 WQLRHRL 10
W+L HRL
Sbjct: 184 WKLAHRL 190


>sp|G1PDH_METTH|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 4 WQLRHRL 10
W+L HRL
Sbjct: 179 WKLAHRL 185


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 4 WQLRHRL 10
W+L HRL
Sbjct: 184 WRLAHRL 190


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KRWWQLRH 8
K W+LRH
Sbjct: 381 KMLWELRH 388


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 KRWWQLRHR 9
K W++L HR
Sbjct: 401 KAWYKLTHR 409


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 4 WQLRHR 9
W++RHR
Sbjct: 82 WKVRHR 87


>sp|ASPGP_THEKO|PLANT-TYPE L-asparaginase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KRWWQLRHRL 10
K+W +LR +L
Sbjct: 141 KQWEELRKKL 150


>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KRWWQLRHRL 10
K+W +LR +L
Sbjct: 141 KQWEELRKKL 150


>sp|TF2B_IGNH4|TRANSCRIPTION initiation factor IIB|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 RWWQLRHRL 10
R WQLR R+
Sbjct: 103 RKWQLRARI 111


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 4 WQLRHRL 10
W+L HR+
Sbjct: 182 WELAHRI 188


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 KRWWQLRHRL 10
K W+ LR+ L
Sbjct: 71 KEWYTLRYEL 80


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 4 WQLRHRL 10
W LRH L
Sbjct: 437 WALRHAL 443


>sp|G1PDH_PYRHO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RWWQLRHRL 10
R W+L H+L
Sbjct: 176 RDWKLAHKL 184


>sp|G1PDH_PYRAB|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus abyssi (strain GE5 /

Query: 2 RWWQLRHRL 10
R W+L H+L
Sbjct: 176 RDWKLAHKL 184


>sp|G1PDH_SULAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfolobus acidocaldarius (strain ATCC

Query: 2 RWWQLRHRL 10
R W+L H+L
Sbjct: 180 RDWRLAHKL 188


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 1 KRWWQ 5
K WWQ
Sbjct: 441 KDWWQ 445


>sp|COFD_METAC|2-PHOSPHO-L-LACTATE transferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KRWWQLRH 8
K+WW + +
Sbjct: 61 KKWWGIEN 68


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 2 RW--WQLRHRL 10
RW WQ+R R+
Sbjct: 99 RWRKWQIRARI 109


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 2 RW--WQLRHRL 10
RW WQ+R R+
Sbjct: 102 RWRKWQIRARI 112


>sp|G1PDH_HYPBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Hyperthermus butylicus (strain DSM 5456

Query: 2 RWWQLRHRL 10
R W+L H+L
Sbjct: 178 RDWRLAHKL 186


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RWWQLRHRL 10
RW+ LR+ L
Sbjct: 76 RWYALRYDL 84


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 WWQLRHRL 10
WW H L
Sbjct: 261 WWVSNHHL 268


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RWWQLRHRL 10
R WQ+R R+
Sbjct: 103 RKWQIRARI 111


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRWWQL 6
+RWW++
Sbjct: 120 ERWWEV 125


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KRWWQL 6
K WW++
Sbjct: 318 KEWWEV 323




53|SequenceR|270|261|PSMAFKRWWQ

>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FKRWWQ 10
FK+WWQ
Sbjct: 388 FKKWWQ 393


>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 4 AFKRWW 9
AFKR+W
Sbjct: 40 AFKRFW 45


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 AFKRW 8
AFKRW
Sbjct: 54 AFKRW 58


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 4 AFKRW 8
AFKRW
Sbjct: 50 AFKRW 54




54|SequenceR|275|266|SSFNSPSMAF

***** No hits found ******


55|SequenceR|280|271|DQCDSSSFNS

>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DQCDSSSF 8
D CDSS F
Sbjct: 198 DTCDSSIF 205


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DQCDSSSFNS 10
D DSS FN+
Sbjct: 386 DVVDSSDFNA 395


>sp|HUTI_PYRAR|IMIDAZOLONEPROPIONASE arsenaticum (strain DSM 13514

Query: 3 CDSSSFN 9
CDS +FN
Sbjct: 204 CDSIAFN 210




56|SequenceR|285|276|KRGEEDQCDS

>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GEEDQCDS 10
GEE CDS
Sbjct: 107 GEEHLCDS 114


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GEEDQCDS 10
GEE CDS
Sbjct: 107 GEEHLCDS 114


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 3 GEEDQCDS 10
GEE CDS
Sbjct: 107 GEEHLCDS 114


>sp|MFNA_METPE|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaerula palustris

Query: 1 KRGEEDQCDS 10
K+ EED C S
Sbjct: 17 KKREEDLCHS 26




57|SequenceR|290|281|YLKNGKRGEE

>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YLKNGKRGE 9
Y+KNGK+ E
Sbjct: 229 YVKNGKQKE 237


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 1 YLKNGKRGE 9
Y+K GK+GE
Sbjct: 153 YVKRGKKGE 161


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YLKNGKRGE 9
Y+KNGK+ E
Sbjct: 229 YVKNGKQKE 237


>sp|NADK_METST|NAD kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YLKNGKRG 8
+LK GK+G
Sbjct: 221 FLKEGKKG 228


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 YLKNGKRG 8
YLKNG+ G
Sbjct: 431 YLKNGRFG 438


>sp|HJC_METTH|CROSSOVER junction endodeoxyribonuclease Hjc|Methanothermobacter

Query: 2 LKNGKRGE 9
+KNG RGE
Sbjct: 2 VKNGTRGE 9


>sp|BIOW_METM6|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 YLKNGKRGE 9
YLKNGK E
Sbjct: 95 YLKNGKDIE 103


>sp|BIOW_METM5|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YLKNGKRGE 9
YLKNGK E
Sbjct: 95 YLKNGKDIE 103


>sp|BIOW_METM7|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YLKNGKRGE 9
YLKNGK E
Sbjct: 95 YLKNGKDIE 103


>sp|PYRB_PYRCJ|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum calidifontis

Query: 2 LKNGKRG 8
LKN KRG
Sbjct: 252 LKNAKRG 258


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 YLKNGKRGEE 10
YL +GKR E
Sbjct: 361 YLSHGKRTSE 370


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 1 YLKNGKRGE 9
YL+NG G+
Sbjct: 95 YLENGHTGD 103




58|SequenceR|295|286|WPFNYYLKNG

>sp|YPZ5_METTF|UNCHARACTERIZED protein ORF5'|Methanothermobacter thermautotrophicus

Query: 3 FNYYLKNG 10
+N+YLKNG
Sbjct: 415 YNFYLKNG 422


>sp|Y119_PYRCJ|UPF0215 protein Pcal_0119|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 WPFNYYLKNG 10
WP YY K+G
Sbjct: 122 WPTPYYTKSG 131


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 3 FNYYLKNG 10
FN+Y KNG
Sbjct: 1010 FNWYYKNG 1017


>sp|BIOW_METMP|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 NYYLKNG 10
NY+LKNG
Sbjct: 93 NYFLKNG 99


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 FNYYLKNG 10
FNY+LK G
Sbjct: 478 FNYFLKEG 485


>sp|BIOW_METM7|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C7 /

Query: 5 YYLKNG 10
YYLKNG
Sbjct: 94 YYLKNG 99


>sp|BIOW_METM6|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C6 /

Query: 5 YYLKNG 10
YYLKNG
Sbjct: 94 YYLKNG 99


>sp|BIOW_METM5|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C5 /

Query: 5 YYLKNG 10
YYLKNG
Sbjct: 94 YYLKNG 99


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 2 PFNYYLKNG 10
PF Y++ NG
Sbjct: 147 PFGYFIING 155


>sp|Y344_METJA|UNCHARACTERIZED protein MJ0344|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PFNYY 6
PFNYY
Sbjct: 55 PFNYY 59


>sp|TRM56_METMA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina mazei

Query: 1 WPFNYYLKN 9
W N+Y+KN
Sbjct: 55 WGGNFYIKN 63


>sp|TRM56_METBF|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina barkeri

Query: 1 WPFNYYLKN 9
W N+Y+KN
Sbjct: 55 WGGNFYIKN 63


>sp|GLFT_PICTO|GLUTAMATE formimidoyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 3 FNYYLKN 9
FNYY+K+
Sbjct: 281 FNYYMKS 287


>sp|YPV5B_METTF|UNCHARACTERIZED protein ORF5B|Methanothermobacter thermautotrophicus

Query: 3 FNYYLKNG 10
+N+YLK G
Sbjct: 367 YNFYLKKG 374


>sp|Y114_METTH|UNCHARACTERIZED protein MTH_114|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 FNYYLKNG 10
FN++L+NG
Sbjct: 164 FNFFLENG 171


>sp|METE_SACI1|METHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 WPFNYYLKN 9
W +N Y KN
Sbjct: 141 WSYNEYYKN 149


>sp|METE_SACI7|METHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 WPFNYYLKN 9
W +N Y KN
Sbjct: 141 WSYNEYYKN 149


>sp|METE_SACI6|METHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 WPFNYYLKN 9
W +N Y KN
Sbjct: 141 WSYNEYYKN 149


>sp|METE_SACI4|METHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 WPFNYYLKN 9
W +N Y KN
Sbjct: 141 WSYNEYYKN 149


>sp|METE_SACI3|METHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 WPFNYYLKN 9
W +N Y KN
Sbjct: 141 WSYNEYYKN 149


>sp|METE_SACI2|METHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 WPFNYYLKN 9
W +N Y KN
Sbjct: 141 WSYNEYYKN 149


>sp|FLUC_METMP|FLUORIDE-SPECIFIC ion channel FluC|Methanococcus maripaludis (strain DSM 14266

Query: 4 NYYLKNG 10
NYYLK G
Sbjct: 91 NYYLKTG 97


>sp|BIOW_METVS|6-CARBOXYHEXANOATE--COA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 5 YYLKNG 10
Y+LKNG
Sbjct: 94 YFLKNG 99


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 FNYYLKNG 10
F YYLK G
Sbjct: 107 FAYYLKYG 114


>sp|GIN15_SULAC|DNA replication complex GINS protein|Sulfolobus acidocaldarius (strain

Query: 4 NYYLKNG 10
NYY K+G
Sbjct: 96 NYYTKDG 102


>sp|PAIA_THEAC|SPERMIDINE N(1)-acetyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FNYYLKNG 10
F++Y KNG
Sbjct: 135 FSFYYKNG 142


>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PFNYYLKNG 10
PF YY G
Sbjct: 66 PFKYYTGRG 74


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 FNYYLKNG 10
F YYLK G
Sbjct: 107 FAYYLKYG 114


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WPFNYYLKN 9
+ FNY+LK+
Sbjct: 474 FSFNYFLKD 482


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FNYYLKN 9
FNY+LK+
Sbjct: 476 FNYFLKD 482


>sp|GLMU_METVS|BIFUNCTIONAL protein GlmU|Methanococcus vannielii (strain ATCC 35089

Query: 4 NYYLKN 9
NY+LKN
Sbjct: 225 NYFLKN 230


>sp|GSA_AERPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PFNYYLKNG 10
P+ +Y+K G
Sbjct: 32 PYPFYVKRG 40


>sp|TRM56_METAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina acetivorans

Query: 1 WPFNYYLKN 9
W ++Y+KN
Sbjct: 55 WGGDFYIKN 63


>sp|Y231_METJA|UNCHARACTERIZED protein MJ0231|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NYYLKNG 10
+YY KNG
Sbjct: 364 SYYYKNG 370


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 3 FNYYLKNG 10
N+++KNG
Sbjct: 575 LNFWIKNG 582


>sp|MTM4_METJA|TYPE II methyltransferase M.MjaIV|Methanocaldococcus jannaschii (strain

Query: 4 NYYLKNG 10
NYYL NG
Sbjct: 208 NYYLANG 214


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 1 WPFNYYLK 8
W FN Y++
Sbjct: 438 WEFNKYVR 445


>sp|METE_SACS2|METHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WPFNYYLKN 9
W +N Y +N
Sbjct: 141 WSYNEYYRN 149


>sp|Y3532_METJA|UNCHARACTERIZED protein MJECL32|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YYLKNG 10
YY KNG
Sbjct: 94 YYTKNG 99




59|SequenceR|300|291|ILEKGWPFNY

>sp|Y951_METJA|UNCHARACTERIZED protein MJ0951|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILEKGWPFN 9
ILEK PFN
Sbjct: 295 ILEKKRPFN 303


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LEKGWPFN 9
LEK W FN
Sbjct: 121 LEKTWEFN 128


>sp|RS3_THEVO|SMALL ribosomal subunit protein uS3|Thermoplasma volcanium (strain ATCC

Query: 2 LEKGWPF 8
LEKGW +
Sbjct: 102 LEKGWSY 108


>sp|RS3_THEAC|SMALL ribosomal subunit protein uS3|Thermoplasma acidophilum (strain ATCC

Query: 2 LEKGWPF 8
LEKGW +
Sbjct: 102 LEKGWSY 108


>sp|SURE_METHJ|5'-NUCLEOTIDASE SurE|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ILEKGWP 7
ILEKG+P
Sbjct: 180 ILEKGFP 186


>sp|RS3_NATPD|SMALL ribosomal subunit protein uS3|Natronomonas pharaonis (strain ATCC

Query: 2 LEKGWPF 8
LE+GW F
Sbjct: 103 LERGWYF 109


>sp|RS3_METMJ|SMALL ribosomal subunit protein uS3|Methanoculleus marisnigri (strain

Query: 2 LEKGWPF 8
LE+GW F
Sbjct: 103 LERGWYF 109


>sp|RS3_METLZ|SMALL ribosomal subunit protein uS3|Methanocorpusculum labreanum (strain

Query: 2 LEKGWPF 8
LE+GW F
Sbjct: 103 LERGWYF 109


>sp|RS3_METHJ|SMALL ribosomal subunit protein uS3|Methanospirillum hungatei JF-1

Query: 2 LEKGWPF 8
LE+GW F
Sbjct: 103 LERGWYF 109


>sp|RS3_METB6|SMALL ribosomal subunit protein uS3|Methanoregula boonei (strain DSM

Query: 2 LEKGWPF 8
LE+GW F
Sbjct: 103 LERGWYF 109


>sp|RS3_METAR|SMALL ribosomal subunit protein uS3|Methanocella arvoryzae (strain DSM

Query: 2 LEKGWPF 8
LE+GW F
Sbjct: 103 LERGWYF 109


>sp|RS3_HALWD|SMALL ribosomal subunit protein uS3|Haloquadratum walsbyi (strain DSM

Query: 2 LEKGWPF 8
LE+GW F
Sbjct: 103 LERGWYF 109


>sp|RS3_HALSA|SMALL ribosomal subunit protein uS3|Halobacterium salinarum (strain ATCC

Query: 2 LEKGWPF 8
LE+GW F
Sbjct: 103 LERGWYF 109


>sp|RS3_HALMA|SMALL ribosomal subunit protein uS3|Haloarcula marismortui (strain ATCC

Query: 2 LEKGWPF 8
LE+GW F
Sbjct: 103 LERGWYF 109


>sp|RS3_ARCFU|SMALL ribosomal subunit protein uS3|Archaeoglobus fulgidus (strain ATCC

Query: 2 LEKGWPF 8
LE+GW F
Sbjct: 102 LERGWYF 108


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 3 EKGWPF 8
EKGW F
Sbjct: 205 EKGWTF 210


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LEKGWPFN 9
L+KG+PF
Sbjct: 611 LQKGYPFR 618


>sp|AROC_SACS2|CHORISMATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 GWPFNY 10
GW +NY
Sbjct: 275 GWKYNY 280


>sp|AROC_SACI3|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 GWPFNY 10
GW +NY
Sbjct: 275 GWKYNY 280


>sp|AROC_SACI7|CHORISMATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 GWPFNY 10
GW +NY
Sbjct: 275 GWKYNY 280


>sp|AROC_SACI6|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 GWPFNY 10
GW +NY
Sbjct: 275 GWKYNY 280


>sp|AROC_SACI4|CHORISMATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 GWPFNY 10
GW +NY
Sbjct: 275 GWKYNY 280


>sp|AROC_SACI2|CHORISMATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 GWPFNY 10
GW +NY
Sbjct: 275 GWKYNY 280


>sp|AROC_SACI1|CHORISMATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 GWPFNY 10
GW +NY
Sbjct: 275 GWKYNY 280


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LEKGWPF 8
LEKGW +
Sbjct: 72 LEKGWIY 78


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 2 LEKGWP 7
LEK WP
Sbjct: 462 LEKNWP 467


>sp|GSA_METMJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LEKGWPF 8
LEKGW +
Sbjct: 75 LEKGWLY 81


>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 2 LEKGWPF 8
LEKGW +
Sbjct: 75 LEKGWLY 81


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LEKGWPF 8
LEKGW +
Sbjct: 79 LEKGWLY 85


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 2 LEKGW 6
LEKGW
Sbjct: 437 LEKGW 441


>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LEKGWPF 8
LEKGW F
Sbjct: 84 LEKGWLF 90


Query: 2 LEKGWPFN 9
LEK +P+N
Sbjct: 318 LEKEYPYN 325


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LEKGWPF 8
LEKGW F
Sbjct: 84 LEKGWLF 90


Query: 2 LEKGWPFN 9
LEK +P+N
Sbjct: 318 LEKEYPYN 325


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LEKGWPF 8
LEKGW F
Sbjct: 84 LEKGWLF 90


Query: 2 LEKGWPFN 9
LEK +P+N
Sbjct: 318 LEKEYPYN 325


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 2 LEKGWPF 8
LEKGW F
Sbjct: 84 LEKGWLF 90


Query: 2 LEKGWPFN 9
LEK +P+N
Sbjct: 318 LEKEYPYN 325


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LEKGWPF 8
LEKGW F
Sbjct: 84 LEKGWLF 90


Query: 2 LEKGWPFN 9
LEK +P+N
Sbjct: 318 LEKEYPYN 325


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LEKGWPF 8
LEKGW F
Sbjct: 84 LEKGWLF 90


Query: 2 LEKGWPFN 9
LEK +P+N
Sbjct: 318 LEKEYPYN 325


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 3 EKGWP 7
E+GWP
Sbjct: 35 EEGWP 39


>sp|ENDA_PYRFU|TRNA-SPLICING endonuclease|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILEKGW 6
+LEKGW
Sbjct: 49 LLEKGW 54


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 ILEKGWP 7
I+EK WP
Sbjct: 56 IIEKNWP 62


>sp|R15PI_PYRFU|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EKGWPFNY 10
E GW F Y
Sbjct: 311 EFGWAFKY 318


>sp|TRPA_METMA|TRYPTOPHAN synthase alpha chain|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILEKGWPFN 9
I+E G+PF+
Sbjct: 57 IIELGFPFS 65


>sp|TRPA_METBF|TRYPTOPHAN synthase alpha chain|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILEKGWPFN 9
I+E G+PF+
Sbjct: 49 IIELGFPFS 57


>sp|TRPA_METAC|TRYPTOPHAN synthase alpha chain|Methanosarcina acetivorans (strain ATCC

Query: 1 ILEKGWPFN 9
I+E G+PF+
Sbjct: 58 IIELGFPFS 66


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ILEKGWP 7
ILE+ WP
Sbjct: 69 ILEEKWP 75


>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix thermoacetophila

Query: 1 ILEKGW 6
+LE+GW
Sbjct: 336 LLERGW 341


>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ILEKGWPFN 9
I E+GW +N
Sbjct: 285 IHERGWKYN 293


>sp|ACDG2_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 2 LEKGWP 7
+EK WP
Sbjct: 462 MEKNWP 467


>sp|ACDG1_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 2 LEKGWP 7
+EK WP
Sbjct: 462 MEKNWP 467


>sp|ACDG_METAC|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 2 LEKGWP 7
+EK WP
Sbjct: 461 MEKNWP 466


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 EKGWPFN 9
EK W FN
Sbjct: 114 EKRWAFN 120


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LEKGWPF 8
LE+GW F
Sbjct: 76 LERGWLF 82


>sp|RL15_PYRNV|LARGE ribosomal subunit protein uL15|Pyrobaculum neutrophilum (strain

Query: 5 GWPF 8
GWPF
Sbjct: 57 GWPF 60


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 3 EKGWPF 8
EKGW F
Sbjct: 205 EKGWTF 210


>sp|RL15_PYRCJ|LARGE ribosomal subunit protein uL15|Pyrobaculum calidifontis (strain

Query: 5 GWPF 8
GWPF
Sbjct: 57 GWPF 60


>sp|RL15_PYRAR|LARGE ribosomal subunit protein uL15|Pyrobaculum arsenaticum (strain

Query: 5 GWPF 8
GWPF
Sbjct: 57 GWPF 60


>sp|RS3_PICTO|SMALL ribosomal subunit protein uS3|Picrophilus torridus (strain ATCC

Query: 2 LEKGWPF 8
LEKGW +
Sbjct: 102 LEKGWNY 108


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 2 LEKGWPFNY 10
+ KGW +N+
Sbjct: 317 ISKGWCYNF 325




60|SequenceR|305|296|NWLTEILEKG

>sp|LEUD1_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 NWLTEILEKG 10
++L EILEKG
Sbjct: 139 DFLKEILEKG 148


>sp|RNZ_AERPE|RIBONUCLEASE Z|Aeropyrum pernix (strain ATCC 700893

Query: 2 WLTEILEKG 10
W+ E++EKG
Sbjct: 178 WIRELIEKG 186


>sp|LEUD_METTH|3-ISOPROPYLMALATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 1 NWLTEILEKG 10
+++ EILEKG
Sbjct: 139 DFMVEILEKG 148


>sp|PELO_KORCO|PROTEIN pelota homolog|Korarchaeum cryptofilum (strain OPF8)

Query: 2 WLTEILEKG 10
WL I+E+G
Sbjct: 25 WLASIIEEG 33


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 WLTEILEKG 10
W +EILEK
Sbjct: 6 WYSEILEKA 14


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 1 NWLTEILEKG 10
NW++E +E+G
Sbjct: 252 NWISEKIEEG 261


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 WLTEILEKG 10
W++ ++EKG
Sbjct: 128 WISALVEKG 136


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NWLTEILEKG 10
N+L +++EKG
Sbjct: 28 NYLRKLIEKG 37


>sp|GGGPS_SULAC|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WLTEILEKG 10
+++EILE+G
Sbjct: 10 YISEILEEG 18


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 WLTEILEKG 10
W++ ++EKG
Sbjct: 128 WISTLVEKG 136


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WLTEILEKG 10
W++ ++EKG
Sbjct: 130 WISTLVEKG 138


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NWLTEILEKG 10
++ +E+LEKG
Sbjct: 173 DYTSELLEKG 182


>sp|RIFK_PYRAB|RIBOFLAVIN kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 WLTEILEKG 10
WL E+ E+G
Sbjct: 43 WLEELKEQG 51


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LTEILEK 9
+TEILEK
Sbjct: 169 MTEILEK 175


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 LTEILEK 9
+TEILEK
Sbjct: 169 MTEILEK 175


>sp|ARGC_METTP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NWLTEILEKG 10
+W+ E+L+ G
Sbjct: 83 DWVPELLDNG 92


>sp|PRPB_AERPE|2-METHYLISOCITRATE lyase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LTEILEKG 10
L EI+EKG
Sbjct: 253 LREIMEKG 260


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 WLTEILEKG 10
W++ ++EKG
Sbjct: 128 WISTLVEKG 136


>sp|HIS4_META3|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus aeolicus (strain

Query: 3 LTEILEKG 10
+TE+LEKG
Sbjct: 113 ITELLEKG 120


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 2 WLTEILEK 9
WL E +EK
Sbjct: 225 WLLETIEK 232


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 NWLTEILEK 9
+W E+L+K
Sbjct: 456 SWFMEVLQK 464


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 TEILEKG 10
+EILEKG
Sbjct: 122 SEILEKG 128


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 WLTEILEK 9
WL E +EK
Sbjct: 225 WLLETIEK 232


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 NWLTEILEKG 10
+W+ ++EKG
Sbjct: 127 SWIKALVEKG 136


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 WLTEILEKG 10
W ++ILEK
Sbjct: 6 WYSDILEKA 14


>sp|Y4021_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 WLTEILEK 9
WLTE+L++
Sbjct: 185 WLTELLQE 192


>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WLTEILEKG 10
W ++ILEK
Sbjct: 6 WYSDILEKA 14


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 TEILEKG 10
+EILEKG
Sbjct: 122 SEILEKG 128


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 WLTEILEKG 10
W ++ILEK
Sbjct: 6 WYSDILEKA 14


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 WLTEILEKG 10
W ++ILEK
Sbjct: 6 WYSDILEKA 14


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 TEILEKG 10
+EILEKG
Sbjct: 122 SEILEKG 128


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 WLTEILEKG 10
W ++ILEK
Sbjct: 6 WYSDILEKA 14


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 NWLTEILEKG 10
+W+ E LE+G
Sbjct: 251 DWIAEKLEEG 260


>sp|Y529_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0529|Methanocaldococcus

Query: 2 WLTEILEKG 10
+++EI+EKG
Sbjct: 118 FVSEIIEKG 126


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 TEILEKG 10
+EILEKG
Sbjct: 122 SEILEKG 128


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 WLTEILEKG 10
WL E LEK
Sbjct: 435 WLRERLEKA 443




61|SequenceR|310|301|EHDGLNWLTE

>sp|RS4E_METKA|SMALL ribosomal subunit protein eS4|Methanopyrus kandleri (strain AV19 /

Query: 2 HDGLNWLTE 10
HDG NWL E
Sbjct: 146 HDGKNWLVE 154


>sp|MRE11_NANEQ|DNA double-strand break repair protein|Nanoarchaeum equitans (strain

Query: 2 HDGLNWLTE 10
HDG WL E
Sbjct: 84 HDGKYWLKE 92


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 HDGLNWLTE 10
HDG WL +
Sbjct: 446 HDGKTWLID 454


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 HDGLNWLT 9
H G+NW T
Sbjct: 162 HTGINWET 169


>sp|RS4E_METTH|SMALL ribosomal subunit protein eS4|Methanothermobacter

Query: 2 HDGLNWLTE 10
HDG N+L++
Sbjct: 143 HDGRNYLSD 151


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 1 EHDGLNWLTE 10
EHDG+ +TE
Sbjct: 214 EHDGIYIITE 223


>sp|Y008_METKA|UNCHARACTERIZED protein MK0008|Methanopyrus kandleri (strain AV19 /

Query: 2 HDGLNWLTE 10
HD +NW+ E
Sbjct: 106 HDLVNWVKE 114


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HDGLNWLT 9
H G+NW++
Sbjct: 159 HAGVNWVS 166


>sp|IXTPA_PYRFU|DITP/XTP pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GLNWLTE 10
GLNWL +
Sbjct: 49 GLNWLKD 55


>sp|Y3512_METJA|UNCHARACTERIZED protein MJECL12|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EHDGLNW 7
EHD NW
Sbjct: 97 EHDVKNW 103


>sp|FTRL_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter

Query: 3 DGLNWLTE 10
DG WL E
Sbjct: 127 DGYEWLEE 134


>sp|Y2141_ARCFU|UNCHARACTERIZED protein AF_2141|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HDGLNW 7
HD L+W
Sbjct: 98 HDSLSW 103


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 1 EHDGLNWLTE 10
+HDG+ +TE
Sbjct: 214 QHDGIYIITE 223


>sp|RS4E_KORCO|SMALL ribosomal subunit protein eS4|Korarchaeum cryptofilum (strain OPF8)

Query: 2 HDGLNWLTE 10
HDG N+L +
Sbjct: 143 HDGRNFLLD 151


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 2 HDGLNWLT 9
HDG +W T
Sbjct: 98 HDGSSWKT 105




62|SequenceR|315|306|YMHLLEHDGL

>sp|RL2_METJA|LARGE ribosomal subunit protein uL2|Methanocaldococcus jannaschii (strain

Query: 1 YMHLLEHDG 9
Y H+L HDG
Sbjct: 129 YAHILTHDG 137


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 2 MHLLEHDG 9
+H+L+HDG
Sbjct: 139 IHVLDHDG 146


>sp|RRP42_THEON|EXOSOME complex component Rrp42|Thermococcus onnurineus (strain NA1)

Query: 2 MHLLEHDG 9
+H+L+HDG
Sbjct: 140 VHVLDHDG 147


>sp|RRP42_THEGJ|EXOSOME complex component Rrp42|Thermococcus gammatolerans (strain DSM

Query: 2 MHLLEHDG 9
+H+L+HDG
Sbjct: 140 VHVLDHDG 147


>sp|RRP42_PYRHO|EXOSOME complex component Rrp42|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MHLLEHDG 9
+H+L+HDG
Sbjct: 140 VHVLDHDG 147


>sp|RRP42_PYRFU|EXOSOME complex component Rrp42|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MHLLEHDG 9
+H+L+HDG
Sbjct: 140 VHVLDHDG 147


>sp|RRP42_PYRAB|EXOSOME complex component Rrp42|Pyrococcus abyssi (strain GE5 /

Query: 2 MHLLEHDG 9
+H+L+HDG
Sbjct: 140 VHVLDHDG 147


>sp|RRP42_METAR|EXOSOME complex component Rrp42|Methanocella arvoryzae (strain DSM 22066

Query: 2 MHLLEHDG 9
+H+L+HDG
Sbjct: 139 VHVLDHDG 146


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 1 YMHLLEHDGL 10
Y+ +LE +GL
Sbjct: 324 YLRILEEEGL 333


>sp|GVPF_HALMT|GAS vesicle protein F|Haloferax mediterranei (strain ATCC 33500

Query: 3 HLLEHDG 9
H+LE+DG
Sbjct: 65 HVLEYDG 71


>sp|DPHB_NATPD|DIPHTHINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 MHLLEHDGL 10
+H++EHD L
Sbjct: 243 LHVVEHDAL 251


>sp|RRP41_HYPBU|EXOSOME complex component Rrp41|Hyperthermus butylicus (strain DSM 5456

Query: 1 YMHLLEHDG 9
YM +L+ DG
Sbjct: 134 YMEVLQSDG 142


>sp|RL2_METMP|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain DSM

Query: 1 YMHLLEHD 8
Y H++ HD
Sbjct: 129 YAHVISHD 136


>sp|RL2_METM5|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain C5

Query: 1 YMHLLEHD 8
Y H++ HD
Sbjct: 129 YAHVISHD 136


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YMHLLEHDGL 10
Y HL H G+
Sbjct: 556 YPHLFPHSGM 565


>sp|RL2_METM7|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain C7

Query: 1 YMHLLEHD 8
Y H++ HD
Sbjct: 129 YAHVVSHD 136


>sp|RL2_METM6|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain C6

Query: 1 YMHLLEHD 8
Y H++ HD
Sbjct: 129 YAHVVSHD 136


>sp|RL2_META3|LARGE ribosomal subunit protein uL2|Methanococcus aeolicus (strain ATCC

Query: 1 YMHLLEHD 8
Y H++ HD
Sbjct: 129 YAHVITHD 136


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 2 MHLLEHD 8
MH+LE D
Sbjct: 156 MHILEED 162


>sp|NADK_SULTO|NAD kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YMHLLEHDGL 10
+ +L+E DGL
Sbjct: 237 FFNLIEFDGL 246


>sp|UGNO_METMP|UDP-N-ACETYLGLUCOSAMINE 3-dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YMHLLEHD 8
YM LLE D
Sbjct: 57 YMDLLEED 64


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 HLLEHDGL 10
H LEH GL
Sbjct: 122 HALEHVGL 129


>sp|RRP42_METTH|EXOSOME complex component Rrp42|Methanothermobacter thermautotrophicus

Query: 2 MHLLEHDG 9
+H++++DG
Sbjct: 141 LHIIDYDG 148




63|SequenceR|320|311|SVNGPYMHLL

>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 2 VNGPYMHLL 10
V PY+HLL
Sbjct: 362 VYNPYLHLL 370


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SVNGPYMH 8
++N PY+H
Sbjct: 18 AINNPYLH 25


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SVNGPYMH 8
++N PY+H
Sbjct: 23 AINNPYLH 30


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 1 SVNGPYMH 8
++N PY+H
Sbjct: 18 AINNPYLH 25


>sp|ASSY_HYPBU|ARGININOSUCCINATE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 SVNGPYMHL 9
S+NG MHL
Sbjct: 225 SINGEKMHL 233


>sp|METK_HALSA|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SVNGPY 6
S+NGPY
Sbjct: 189 SLNGPY 194


>sp|METK_HALS3|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SVNGPY 6
S+NGPY
Sbjct: 189 SLNGPY 194


>sp|RRP4_PICTO|EXOSOME complex component Rrp4|Picrophilus torridus (strain ATCC 700027

Query: 3 NGPYM 7
NGPYM
Sbjct: 52 NGPYM 56


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 1 SVNGPYMHL 9
+VNG Y HL
Sbjct: 25 AVNGYYRHL 33


>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 2 VNGPYMHLL 10
++ P MHLL
Sbjct: 399 ISDPLMHLL 407


>sp|TYW3_AERPE|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 VNGPYMHL 9
V GP +HL
Sbjct: 88 VTGPILHL 95


>sp|Y1278_METJA|UNCHARACTERIZED protein MJ1278|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VNGPYMHLL 10
VN P +H+L
Sbjct: 57 VNHPVLHIL 65


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 1 SVNGPYMHLL 10
+VN Y+H+L
Sbjct: 201 AVNQKYLHVL 210




64|SequenceR|325|316|RGHLKSVNGP

>sp|RS4E_DESA1|SMALL ribosomal subunit protein eS4|Desulfurococcus amylolyticus

Query: 3 HLKSVNGP 10
HLK++N P
Sbjct: 9 HLKAINAP 16


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 RGHLKSVNGP 10
+GH+ + GP
Sbjct: 640 KGHIAMITGP 649


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 1 RGHLKSVNG 9
RG LKS+ G
Sbjct: 416 RGELKSIAG 424


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RGHLKSVN 8
RG+LKSV+
Sbjct: 103 RGYLKSVH 110


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GHLKSVNGP 10
GHL S N P
Sbjct: 145 GHLVSCNKP 153


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 2 GHLKSVNG 9
GH+KS+ G
Sbjct: 298 GHIKSLRG 305


>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RGHLKSVNG 9
RG++K +NG
Sbjct: 344 RGYIKIMNG 352


>sp|NUCS_METKA|ENDONUCLEASE NucS|Methanopyrus kandleri (strain AV19 /

Query: 1 RGHLKSVNGP 10
RG +SV GP
Sbjct: 36 RGRAESVAGP 45


>sp|T1M2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 1 RGHLKSVNG 9
+G+L+ +NG
Sbjct: 567 KGYLEEING 575


>sp|GFCR_METHJ|TRANSCRIPTIONAL regulator GfcR|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RGHLKSVNGP 10
R HLK+ GP
Sbjct: 75 RLHLKNPEGP 84




65|SequenceR|330|321|NKRGDRGHLK

>sp|MPTA_METHJ|GTP cyclohydrolase MptA|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KRGDRGHL 9
KRGD GH+
Sbjct: 248 KRGDEGHV 255


>sp|Y529_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0529|Methanocaldococcus

Query: 2 KRGDRGHLK 10
++GD+G+L+
Sbjct: 124 EKGDKGYLR 132


>sp|FLAB1_METVS|FLAGELLIN B1|Methanococcus vannielii (strain ATCC 35089

Query: 1 NKRGDRG 7
NK+GD G
Sbjct: 9 NKKGDSG 15


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 KRGDRGHL 9
+RGD GH+
Sbjct: 36 ERGDGGHV 43


>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 NKRGDRGHL 9
++RG+ GH+
Sbjct: 96 SRRGEEGHV 104


>sp|Y1452_METJA|UNCHARACTERIZED protein MJ1452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKRGDRGHLK 10
NK+ D+G +K
Sbjct: 231 NKKVDKGRVK 240




66|SequenceR|335|326|VCPVVNKRGD

>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 CPVVNKRGD 10
CPV +RGD
Sbjct: 885 CPVRIERGD 893


>sp|Y792_SULAC|PROTEIN Saci_0792|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PVVNKRG 9
PV+NKRG
Sbjct: 45 PVLNKRG 51


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VCPVVNK 7
+CPV NK
Sbjct: 351 ICPVKNK 357


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VCPVVNKRGD 10
V PV++ RGD
Sbjct: 264 VFPVLDVRGD 273


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VCPVVNKRG 9
V P+VNK G
Sbjct: 485 VFPLVNKEG 493


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VCPVVNKRG 9
V P+VNK G
Sbjct: 485 VFPLVNKEG 493


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 VCPVVNKRG 9
V P+VNK G
Sbjct: 485 VFPLVNKEG 493


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 VCPVVNKRG 9
V P+VNK G
Sbjct: 485 VFPLVNKEG 493


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 VCPVVNKRG 9
V P+VNK G
Sbjct: 485 VFPLVNKEG 493


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VCPVVNKRG 9
+C V+NK G
Sbjct: 460 LCAVLNKEG 468


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 CPVVNKRGD 10
C ++NK G+
Sbjct: 452 CSIINKAGE 460


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CPVVNK 7
CPV NK
Sbjct: 8 CPVCNK 13


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 VCPVVNKRG 9
VC +V +RG
Sbjct: 253 VCALVERRG 261


>sp|Y646_METJA|UPF0305 protein MJ0646|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPVVNKR 8
CPV NK+
Sbjct: 139 CPVKNKQ 145


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 3 PVVNKRG 9
PV+NKR
Sbjct: 55 PVINKRA 61


>sp|Y229_SULTO|PROTEIN STK_02290|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PVVNKRG 9
P++NK+G
Sbjct: 49 PILNKKG 55


>sp|Y2657_METHJ|UPF0210 protein Mhun_2657|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PVVNKR 8
P+VNKR
Sbjct: 70 PIVNKR 75


>sp|Y485_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VCPVVNKRGD 10
+CP RGD
Sbjct: 283 MCPYSRDRGD 292


>sp|Y1665_METJA|UPF0210 protein MJ1665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PVVNKR 8
P+VNKR
Sbjct: 70 PIVNKR 75


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 3 PVVNKR 8
P+VNKR
Sbjct: 70 PIVNKR 75


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 3 PVVNKR 8
P+VNKR
Sbjct: 70 PIVNKR 75


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 3 PVVNKR 8
P+VNKR
Sbjct: 70 PIVNKR 75


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 3 PVVNKR 8
P+VNKR
Sbjct: 70 PIVNKR 75


>sp|Y1030_METLZ|UPF0210 protein Mlab_1030|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PVVNKR 8
P+VNKR
Sbjct: 70 PIVNKR 75


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 3 PVVNKR 8
P+VNKR
Sbjct: 70 PIVNKR 75


>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PVVNKR 8
P+VNKR
Sbjct: 70 PIVNKR 75


>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 3 PVVNKR 8
P+VNKR
Sbjct: 72 PIVNKR 77




67|SequenceR|340|331|GNVSLVCPVV

>sp|HYD2B_PYRFU|SULFHYDROGENASE 2 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNVSLVCP 8
GN ++VCP
Sbjct: 233 GNCTIVCP 240


>sp|CG121_METJA|REGULATORY protein Cgi121|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNVSLVC 7
GNV L+C
Sbjct: 79 GNVCLIC 85


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 GNVSLVCP 8
GN ++ CP
Sbjct: 409 GNCTIACP 416


>sp|TRPC_METTH|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 GNVSLVC 7
G VSL+C
Sbjct: 45 GKVSLIC 51




68|SequenceR|345|336|GRDLDGNVSL

>sp|NUCS_THEKO|ENDONUCLEASE NucS|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GRDLDGNV 8
GRD DGN+
Sbjct: 168 GRDSDGNI 175


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RDLDGN 7
RDLDGN
Sbjct: 48 RDLDGN 53


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RDLDGN 7
RDLDGN
Sbjct: 48 RDLDGN 53


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 2 RDLDGNVSL 10
RD DG VSL
Sbjct: 290 RDADGEVSL 298


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 RDLDGNVS 9
RDL GN+S
Sbjct: 1190 RDLQGNLS 1197


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 RDLDGNVS 9
RDLDG +S
Sbjct: 84 RDLDGRLS 91


>sp|NUCS1_HALSA|ENDONUCLEASE NucS 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GRDLDGNVS 9
GRD DG V+
Sbjct: 163 GRDADGTVT 171


>sp|Y327_METJA|UNCHARACTERIZED protein MJ0327|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRDLDGNVSL 10
G D+D N+SL
Sbjct: 83 GDDVDKNISL 92


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DLDGNVSL 10
D+DGNV L
Sbjct: 50 DVDGNVLL 57


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RDLDGN 7
+DLDGN
Sbjct: 48 KDLDGN 53


>sp|CAS1B_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GRDLDG 6
GRD+DG
Sbjct: 165 GRDVDG 170


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRDLDG 6
G+DLDG
Sbjct: 122 GKDLDG 127


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GRDLDGNVS 9
GR+L GN++
Sbjct: 603 GRNLSGNLA 611


>sp|TRPC_THEKO|INDOLE-3-GLYCEROL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 DGNVSL 10
DGNVSL
Sbjct: 162 DGNVSL 167


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DLDGNVS 9
D+DGN+S
Sbjct: 238 DVDGNLS 244


>sp|Y196_THEAC|PUTATIVE ankyrin repeat protein Ta0196|Thermoplasma acidophilum (strain

Query: 2 RDLDGNVSL 10
RD++GN +L
Sbjct: 79 RDIEGNTAL 87


>sp|FUCA_METJA|L-FUCULOSE phosphate aldolase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DLDGNV 8
DLDGNV
Sbjct: 55 DLDGNV 60


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GRDLDGNV 8
G+DL+G V
Sbjct: 284 GKDLEGTV 291


>sp|TRPC_PYRAB|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 5 DGNVSL 10
DGNVSL
Sbjct: 163 DGNVSL 168


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 3 DLDGNVSL 10
D+DGN+ +
Sbjct: 62 DIDGNIGI 69


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 3 DLDGNVSL 10
D DG+VSL
Sbjct: 328 DADGHVSL 335


>sp|RS13_SACS2|SMALL ribosomal subunit protein uS13|Saccharolobus solfataricus (strain

Query: 1 GRDLDGNVSL 10
G+D+DG + L
Sbjct: 13 GQDVDGTMKL 22


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 2 RDLDGNVS 9
RDLDG +S
Sbjct: 63 RDLDGEMS 70


>sp|KAD6_PYRAB|PUTATIVE adenylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 GRDLDGNVSL 10
GR++DG V +
Sbjct: 41 GREVDGEVEV 50


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 5 DGNVSL 10
DGNVSL
Sbjct: 148 DGNVSL 153


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LDGNVS 9
LDGNVS
Sbjct: 244 LDGNVS 249




69|SequenceR|350|341|LYALMGRDLD

>sp|Y1020_METJA|UNCHARACTERIZED protein MJ1020|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 MGRDLD 10
MGRD+D
Sbjct: 1 MGRDMD 6


>sp|BACH_HALMA|HALORHODOPSIN marismortui (strain ATCC 43049

Query: 1 LYALMGRDLD 10
L+ MGRDL+
Sbjct: 46 LFVAMGRDLE 55


>sp|BACH_HALHS|HALORHODOPSIN halobium (strain shark)

Query: 1 LYALMGRDLD 10
L+ MGRDL+
Sbjct: 46 LFVAMGRDLE 55


>sp|KHSE_METVS|HOMOSERINE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LYALMGRDLD 10
+YAL DLD
Sbjct: 208 IYALYNNDLD 217


>sp|CSA3_THETK|CRISPR locus-related putative DNA-binding protein|Thermoproteus tenax

Query: 1 LYALMGRDLD 10
LYA GRD D
Sbjct: 30 LYAYTGRDED 39


>sp|RBL_METBF|RIBULOSE bisphosphate carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LYALMGRDL 9
LY + GRD+
Sbjct: 365 LYTIFGRDV 373


>sp|KHSE_METMP|HOMOSERINE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LYALMGRDLD 10
+YAL DLD
Sbjct: 207 VYALYNNDLD 216


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 2 YALMGRDLD 10
YA+ GRD++
Sbjct: 376 YAVRGRDVE 384


>sp|MCRB_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain

Query: 4 LMGRDLD 10
+MGR+LD
Sbjct: 69 IMGRELD 75


>sp|MCRB_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 4 LMGRDLD 10
+MGR+LD
Sbjct: 69 IMGRELD 75


>sp|XACH_HALVD|XYLOSE/ARABINOSE import permease protein XacH|Haloferax volcanii (strain ATCC 29605

Query: 1 LYALMGR 7
LYAL+GR
Sbjct: 256 LYALVGR 262


>sp|PYRK_METTH|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanothermobacter

Query: 2 YALMGRDL 9
+ LMGRD+
Sbjct: 97 FELMGRDI 104


>sp|Y727_METJA|UNCHARACTERIZED protein MJ0727|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ALMGRDLD 10
++MG+D+D
Sbjct: 9 SMMGKDID 16




70|SequenceR|355|346|QFSDYLYALM

>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QFSDYLYALM 10
+++DY+YA+M
Sbjct: 155 EYADYVYAVM 164


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 QFSDYLYALM 10
+++DY+YA+M
Sbjct: 155 EYADYVYAVM 164


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 QFSDYLYALM 10
++ DY+YA+M
Sbjct: 155 EYIDYVYAVM 164


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QFSDYLYALM 10
++ DY+YA+M
Sbjct: 155 EYIDYVYAVM 164


>sp|RL18_KORCO|LARGE ribosomal subunit protein uL18|Korarchaeum cryptofilum (strain

Query: 1 QFSDYL 6
QFSDYL
Sbjct: 164 QFSDYL 169


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 2 FSDYLYALM 10
+ DY+YA+M
Sbjct: 156 YVDYVYAVM 164


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FSDYLYALM 10
+ DY+YA+M
Sbjct: 156 YVDYVYAVM 164


>sp|Y778_AERPE|PUTATIVE HTH-type transcriptional regulatory protein|Aeropyrum pernix

Query: 1 QFSDYLYALM 10
+F DYLY ++
Sbjct: 8 EFEDYLYRVI 17


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 2 FSDYLYALM 10
+ DY+YA+M
Sbjct: 156 YIDYVYAVM 164


>sp|CAS5_HALVD|CRISPR-ASSOCIATED protein Cas5|Haloferax volcanii (strain ATCC 29605

Query: 1 QFSDYLYA 8
+F DY+YA
Sbjct: 230 RFDDYVYA 237




71|SequenceR|360|351|SNETLQFSDY

>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NETLQFSDY 10
NET ++DY
Sbjct: 689 NETFLYADY 697


>sp|KADA_SACS2|ADENYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NETLQFSDY 10
NE +QF+ Y
Sbjct: 152 NEVIQFARY 160


>sp|KADA_SACI7|ADENYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NETLQFSDY 10
NE +QF+ Y
Sbjct: 152 NEVIQFARY 160


>sp|KADA_SACI6|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NETLQFSDY 10
NE +QF+ Y
Sbjct: 152 NEVIQFARY 160


>sp|KADA_SACI4|ADENYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NETLQFSDY 10
NE +QF+ Y
Sbjct: 152 NEVIQFARY 160


>sp|KADA_SACI3|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 NETLQFSDY 10
NE +QF+ Y
Sbjct: 152 NEVIQFARY 160


>sp|KADA_SACI2|ADENYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NETLQFSDY 10
NE +QF+ Y
Sbjct: 152 NEVIQFARY 160


>sp|KADA_SACI1|ADENYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 NETLQFSDY 10
NE +QF+ Y
Sbjct: 152 NEVIQFARY 160


>sp|PGP2_SACS2|PHOSPHOGLYCOLATE phosphatase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SNETLQFSDY 10
SNE L SDY
Sbjct: 5 SNEILVASDY 14


>sp|RSMA_META3|PROBABLE ribosomal RNA small subunit|Methanococcus aeolicus (strain ATCC

Query: 1 SNETLQFSD 9
SNE ++F+D
Sbjct: 234 SNEIMEFND 242


>sp|DAPA_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 SNETLQFSDY 10
++E L+FS Y
Sbjct: 80 TSEALEFSQY 89


>sp|DAPA_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 SNETLQFSDY 10
++E L+FS Y
Sbjct: 80 TSEALEFSQY 89


>sp|DAPA_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SNETLQFSDY 10
++E L+FS Y
Sbjct: 80 TSEALEFSQY 89


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NETLQFSD 9
N T+Q+SD
Sbjct: 2486 NNTIQYSD 2493


>sp|DAPA_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 SNETLQFSDY 10
++E L+FS Y
Sbjct: 80 TSEALEFSQY 89


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 NETLQFSD 9
NET+Q+ D
Sbjct: 175 NETVQYCD 182




72|SequenceR|365|356|KKRTFSNETL

>sp|Y609_METJA|UNCHARACTERIZED protein MJ0609|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KRTFSN 7
KRTFSN
Sbjct: 424 KRTFSN 429




73|SequenceR|370|361|KRHLNKKRTF

>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRHLNKKRTF 10
K+H+NK TF
Sbjct: 56 KKHVNKNLTF 65


>sp|LEU3_METTH|3-ISOPROPYLMALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 RHLNKKR 8
+HLNKK+
Sbjct: 282 KHLNKKQ 288


>sp|VORB_PYRHO|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus horikoshii (strain ATCC

Query: 1 KRHLNKKR 8
KRHL +KR
Sbjct: 166 KRHLLEKR 173


>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 RHLNKKRT 9
RH+ KK+T
Sbjct: 398 RHIKKKQT 405


>sp|METK_SACS2|S-ADENOSYLMETHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KRHLNKKR 8
+RHLN K+
Sbjct: 181 ERHLNSKQ 188


>sp|METK_SACI7|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KRHLNKKR 8
+RHLN K+
Sbjct: 181 ERHLNSKQ 188


>sp|METK_SACI6|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KRHLNKKR 8
+RHLN K+
Sbjct: 181 ERHLNSKQ 188


>sp|METK_SACI4|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KRHLNKKR 8
+RHLN K+
Sbjct: 181 ERHLNSKQ 188


>sp|METK_SACI3|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KRHLNKKR 8
+RHLN K+
Sbjct: 181 ERHLNSKQ 188


>sp|METK_SACI2|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KRHLNKKR 8
+RHLN K+
Sbjct: 181 ERHLNSKQ 188


>sp|METK_SACI1|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KRHLNKKR 8
+RHLN K+
Sbjct: 181 ERHLNSKQ 188




74|SequenceR|375|366|HLKLVKRHLN

>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 1 HLKLVKRHL 9
HLK VK HL
Sbjct: 381 HLKRVKEHL 389


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LKLVKRHLN 10
LK+V RH N
Sbjct: 415 LKIVGRHFN 423


>sp|FEN_METMA|FLAP endonuclease 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LKLVKRHLN 10
LKL+K+H N
Sbjct: 250 LKLIKKHGN 258


>sp|FEN_METAR|FLAP endonuclease 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 LKLVKRH 8
LKLVK+H
Sbjct: 249 LKLVKKH 255


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LKLVKRHLN 10
LK+++RHL+
Sbjct: 324 LKMLERHLD 332


>sp|CARA_PYRAE|CARBAMOYL phosphate synthase small chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 LKLVKRH 8
LKLV+RH
Sbjct: 338 LKLVERH 344


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HLKLVKRHLN 10
H+KL +++LN
Sbjct: 237 HIKLGRKYLN 246


>sp|FEN_METAC|FLAP endonuclease 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LKLVKRH 8
LKL+K+H
Sbjct: 250 LKLIKKH 256


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 2 LKLVKRH 8
LKLVK H
Sbjct: 250 LKLVKEH 256


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 4 LVKRHLN 10
+VKRHLN
Sbjct: 142 VVKRHLN 148


>sp|YPV8_METTF|UNCHARACTERIZED protein ORF8|Methanothermobacter thermautotrophicus

Query: 4 LVKRHLN 10
+VKRHLN
Sbjct: 142 VVKRHLN 148


>sp|FEN_METBF|FLAP endonuclease 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 LKLVKRH 8
LKL+K+H
Sbjct: 250 LKLIKKH 256




75|SequenceR|380|371|PALCPHLKLV

>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 PALCPHLKLV 10
PA CPH K +
Sbjct: 87 PAKCPHGKCI 96


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ALCPHLK 8
LCPHL+
Sbjct: 37 GLCPHLR 43


>sp|Y748_ARCFU|UNCHARACTERIZED protein AF_0748|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PALCP 5
PALCP
Sbjct: 109 PALCP 113


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PALCPHLKL 9
PA+C H KL
Sbjct: 33 PAICDHNKL 41


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 PALCPHLKL 9
PALCP L
Sbjct: 306 PALCPEESL 314


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 PALCP 5
PALCP
Sbjct: 369 PALCP 373


>sp|PYRDB_THEVO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma volcanium (strain

Query: 4 CPHLK 8
CPH+K
Sbjct: 128 CPHVK 132


>sp|PYRDB_THEAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma acidophilum

Query: 4 CPHLK 8
CPH+K
Sbjct: 128 CPHVK 132


>sp|PYRDB_ARCFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Archaeoglobus fulgidus (strain

Query: 4 CPHLK 8
CPH+K
Sbjct: 128 CPHVK 132


>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PALCPHL 7
PA+C HL
Sbjct: 220 PAVCVHL 226


>sp|Y142_AERPE|UNCHARACTERIZED HTH-type transcriptional regulator APE_0142|Aeropyrum pernix

Query: 1 PALCPHLK 8
P CPH K
Sbjct: 137 PKYCPHKK 144


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ALCPHLK 8
+CPH K
Sbjct: 142 GICPHCK 148


>sp|G1PDH_METPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaerula palustris (strain ATCC

Query: 1 PALCPHLKL 9
PA+C LK+
Sbjct: 37 PAVCQDLKI 45




76|SequenceR|385|376|LAVKIPALCP

>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KIPALCP 10
K+P LCP
Sbjct: 342 KLPILCP 348


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 KIPALCP 10
K+P LCP
Sbjct: 342 KLPILCP 348


>sp|DHYS_METVS|PROBABLE deoxyhypusine synthase|Methanococcus vannielii (strain ATCC 35089

Query: 4 KIPALCP 10
KIP CP
Sbjct: 205 KIPIFCP 211


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 1 LAVKIPALCP 10
A KIP CP
Sbjct: 257 FAPKIPHTCP 266


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LAVKIPALCP 10
L +PA+CP
Sbjct: 337 LKENLPAVCP 346


>sp|PANB_PYRCJ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 AVKIPALC 9
AVKIP +C
Sbjct: 196 AVKIPTIC 203


>sp|SDO1_METJA|RIBOSOME maturation protein SDO1 homolog|Methanocaldococcus jannaschii

Query: 1 LAVKIPA 7
+AVKIPA
Sbjct: 171 IAVKIPA 177


>sp|DNPH1_METAC|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanosarcina

Query: 1 LAVKIPALC 9
L KIP LC
Sbjct: 113 LVRKIPVLC 121


>sp|AMZA_THEKO|ARCHAEMETZINCIN kodakarensis (strain ATCC BAA-918

Query: 3 VKIPALCP 10
+K+P CP
Sbjct: 165 IKLPYYCP 172


>sp|PANB_CALMQ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 AVKIPALC 9
+VKIP +C
Sbjct: 196 SVKIPTIC 203


>sp|DNPH1_METMA|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanosarcina mazei

Query: 1 LAVKIPALC 9
L KIP LC
Sbjct: 111 LVRKIPVLC 119




77|SequenceR|390|381|GRGVDLAVKI

>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GRGVDLA 7
G+GVDLA
Sbjct: 613 GKGVDLA 619


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GRGVDLA 7
G+GVDLA
Sbjct: 613 GKGVDLA 619


>sp|RL1_METM7|LARGE ribosomal subunit protein uL1|Methanococcus maripaludis (strain

Query: 1 GRGVDLAVKI 10
GRG D+A+ +
Sbjct: 53 GRGKDVAIAV 62


>sp|RL1_METM6|LARGE ribosomal subunit protein uL1|Methanococcus maripaludis (strain

Query: 1 GRGVDLAVKI 10
GRG D+A+ +
Sbjct: 53 GRGKDVAIAV 62


>sp|RL1_METMP|LARGE ribosomal subunit protein uL1|Methanococcus maripaludis (strain

Query: 1 GRGVDLAVKI 10
GRG D+A+ +
Sbjct: 53 GRGKDVAIAV 62


>sp|RL1_METM5|LARGE ribosomal subunit protein uL1|Methanococcus maripaludis (strain

Query: 1 GRGVDLAVKI 10
GRG D+A+ +
Sbjct: 53 GRGKDVAIAV 62


>sp|THIL_PYRCJ|THIAMINE-MONOPHOSPHATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RGVDLAVK 9
RGVD+ VK
Sbjct: 208 RGVDIVVK 215




78|SequenceR|395|386|LELTPGRGVD

>sp|IF2G_HALLT|TRANSLATION initiation factor 2 subunit|Halorubrum lacusprofundi (strain ATCC

Query: 1 LELTPGRGVD 10
LE+ PGR VD
Sbjct: 250 LEIRPGREVD 259


>sp|IF2G_HALWD|TRANSLATION initiation factor 2 subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LELTPGRGVD 10
+EL PGR VD
Sbjct: 250 IELRPGREVD 259


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 1 LELTPGRGV 9
LE PGRGV
Sbjct: 68 LEEFPGRGV 76


>sp|Y314_METJA|UNCHARACTERIZED protein MJ0314|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LELTPGRGVD 10
L +TP RG+D
Sbjct: 31 LGITPRRGLD 40


>sp|Y1111_HALSA|UNCHARACTERIZED GTP-binding protein VNG_1111G|Halobacterium salinarum (strain ATCC

Query: 5 PGRGVD 10
PGRGVD
Sbjct: 302 PGRGVD 307


>sp|HYPA_THESM|HYDROGENASE maturation factor HypA|Thermococcus sibiricus (strain DSM 12597

Query: 1 LELTPGRGV 9
E+T GRGV
Sbjct: 118 FEVTKGRGV 126


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LELTPGRGVD 10
+ + PG GVD
Sbjct: 324 VHIAPGHGVD 333


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 LELTPGRGVD 10
LEL PGR V+
Sbjct: 251 LELRPGREVE 260


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 LELTPGRGVD 10
LEL PGR V+
Sbjct: 251 LELRPGREVE 260


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ELTPGRGVD 10
E+TP R +D
Sbjct: 307 EITPAREID 315


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LELTPGR 7
LEL PGR
Sbjct: 211 LELMPGR 217


>sp|DPHB_AERPE|DIPHTHINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LELTPGRGVD 10
++L+PG+GV
Sbjct: 180 VQLSPGQGVS 189


>sp|RSMA_THESM|PROBABLE ribosomal RNA small subunit|Thermococcus sibiricus (strain DSM

Query: 1 LELTPGRGV 9
LE+ PG GV
Sbjct: 47 LEIGPGLGV 55


>sp|HIS5_NATPD|IMIDAZOLE glycerol phosphate synthase subunit|Natronomonas pharaonis (strain

Query: 1 LELTPGRGV 9
L+L PGR V
Sbjct: 109 LDLVPGRNV 117


>sp|RSMA_THEON|PROBABLE ribosomal RNA small subunit|Thermococcus onnurineus (strain NA1)

Query: 1 LELTPGRGV 9
LE+ PG GV
Sbjct: 47 LEIGPGLGV 55


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 1 LELTPGRGVD 10
L +TP RG++
Sbjct: 35 LSITPVRGIE 44


>sp|TF2B_METTP|TRANSCRIPTION initiation factor IIB|Methanothrix thermoacetophila (strain DSM

Query: 2 ELTPGRG 8
ELT GRG
Sbjct: 278 ELTSGRG 284


>sp|RSMA_THEGJ|PROBABLE ribosomal RNA small subunit|Thermococcus gammatolerans (strain

Query: 1 LELTPGRGV 9
LE+ PG GV
Sbjct: 47 LEIGPGLGV 55


>sp|IF2G_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 1 LELTPGRGVD 10
+EL PGR V+
Sbjct: 250 IELRPGREVE 259


>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 2 ELTPGRG 8
ELT GRG
Sbjct: 275 ELTSGRG 281


>sp|TF2B_METAC|TRANSCRIPTION initiation factor IIB|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ELTPGRG 8
ELT GRG
Sbjct: 278 ELTSGRG 284


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 LELTPGRGV 9
LE PGRG
Sbjct: 76 LERAPGRGA 84


>sp|TF2B_METMZ|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (Methanosarcina frisia)

Query: 2 ELTPGRG 8
ELT GRG
Sbjct: 278 ELTSGRG 284


>sp|TF2B_METMA|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ELTPGRG 8
ELT GRG
Sbjct: 278 ELTSGRG 284


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ELTPGRG 8
ELT GRG
Sbjct: 267 ELTSGRG 273


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ELTPGRG 8
ELT GRG
Sbjct: 278 ELTSGRG 284


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 2 ELTPGRG 8
ELT GRG
Sbjct: 275 ELTSGRG 281


>sp|RSMA_THEKO|PROBABLE ribosomal RNA small subunit|Thermococcus kodakarensis (strain

Query: 1 LELTPGRGV 9
LE+ PG GV
Sbjct: 47 LEIGPGLGV 55


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LTPGRGVD 10
PGRG D
Sbjct: 495 FIPGRGAD 502


>sp|LEUD_PYRHO|3-ISOPROPYLMALATE dehydratase small subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 ELTPGR 7
E+TPGR
Sbjct: 18 EITPGR 23


>sp|LEUD2_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 2 ELTPGR 7
E+TPGR
Sbjct: 18 EITPGR 23




79|SequenceR|400|391|QCVQRLELTP

>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 3 VQRLELTP 10
VQRLEL P
Sbjct: 241 VQRLELIP 248


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 3 VQRLELTP 10
VQRLEL P
Sbjct: 242 VQRLELIP 249


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 3 VQRLELTP 10
VQ+LEL P
Sbjct: 240 VQKLELIP 247


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 3 VQRLELTP 10
VQ+LEL P
Sbjct: 240 VQKLELIP 247


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.16.4

Query: 3 VQRLELTP 10
VQ+LEL P
Sbjct: 240 VQKLELIP 247


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.14.25

Query: 3 VQRLELTP 10
VQ+LEL P
Sbjct: 240 VQKLELIP 247


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 3 VQRLELTP 10
VQ+LEL P
Sbjct: 240 VQKLELIP 247


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 3 VQRLELTP 10
VQ+LEL P
Sbjct: 240 VQKLELIP 247


>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain ATCC

Query: 3 VQRLELTP 10
VQ+LEL P
Sbjct: 240 VQKLELIP 247


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 1 QCVQRLE 7
+CV+RLE
Sbjct: 20 ECVRRLE 26


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 QCVQRLELTP 10
+C++ ELTP
Sbjct: 464 KCIRTEELTP 473


>sp|HDRB_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina mazei (strain

Query: 2 CVQRLEL 8
C+QRLE+
Sbjct: 26 CLQRLEI 32




80|SequenceR|405|396|ENFLGQCVQR

>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 1 ENFLGQ 6
ENFLGQ
Sbjct: 117 ENFLGQ 122


>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 NFLGQCVQ 9
++LG CVQ
Sbjct: 109 DYLGSCVQ 116


>sp|Y665_METJA|UNCHARACTERIZED protein MJ0665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NFLGQCVQR 10
NF+G+C+ +
Sbjct: 51 NFVGKCIGK 59


>sp|ISF1_ARCFU|IRON-SULFUR flavoprotein AF_1436|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GQCVQR 10
G+CVQR
Sbjct: 57 GECVQR 62


>sp|RL6_HALWD|LARGE ribosomal subunit protein uL6|Haloquadratum walsbyi (strain DSM

Query: 1 ENFLGQCVQR 10
ENFLG+ R
Sbjct: 110 ENFLGEKASR 119


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 FLGQCVQ 9
+LG CVQ
Sbjct: 107 YLGSCVQ 113


>sp|GUAAA_HALMA|GMP synthase [glutamine-hydrolyzing] subunit A|Haloarcula marismortui

Query: 1 ENFLGQCVQR 10
ENFL C Q+
Sbjct: 175 ENFLSVCDQQ 184


>sp|DPCKG_PYRAR|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 NFLGQCVQR 10
N+L QC Q+
Sbjct: 163 NYLEQCQQK 171


>sp|RL6_PYRHO|LARGE ribosomal subunit protein uL6|Pyrococcus horikoshii (strain ATCC

Query: 1 ENFLGQCVQR 10
ENFLG+ R
Sbjct: 111 ENFLGEKAPR 120


>sp|RL6_PYRFU|LARGE ribosomal subunit protein uL6|Pyrococcus furiosus (strain ATCC

Query: 1 ENFLGQCVQR 10
ENFLG+ R
Sbjct: 111 ENFLGEKAPR 120


>sp|RL6_PYRAB|LARGE ribosomal subunit protein uL6|Pyrococcus abyssi (strain GE5 /

Query: 1 ENFLGQCVQR 10
ENFLG+ R
Sbjct: 111 ENFLGEKAPR 120


>sp|RL6_NATPD|LARGE ribosomal subunit protein uL6|Natronomonas pharaonis (strain ATCC

Query: 1 ENFLGQCVQR 10
ENFLG+ R
Sbjct: 105 ENFLGEKAPR 114


>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 1 ENFLGQCVQR 10
ENFLG+ R
Sbjct: 116 ENFLGEKAPR 125


>sp|RL6_HALMA|LARGE ribosomal subunit protein uL6|Haloarcula marismortui (strain ATCC

Query: 1 ENFLGQCVQR 10
ENFLG+ R
Sbjct: 106 ENFLGEKAPR 115


>sp|HIS5_NATPD|IMIDAZOLE glycerol phosphate synthase subunit|Natronomonas pharaonis (strain

Query: 1 ENFLGQCVQR 10
+NF+ C++R
Sbjct: 206 QNFVDYCLER 215


>sp|HIS5_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 2 NFLGQCV 8
NFLG C+
Sbjct: 71 NFLGVCL 77


>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 1 ENFLGQC 7
+NFLG C
Sbjct: 180 KNFLGVC 186




81|SequenceR|410|401|GNELLENFLG

>sp|RL6_METJA|LARGE ribosomal subunit protein uL6|Methanocaldococcus jannaschii (strain

Query: 1 GNE-LLENFLG 10
GNE ++ENFLG
Sbjct: 105 GNEVIIENFLG 115


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNELLENFL 9
GN LLE FL
Sbjct: 207 GNSLLEGFL 215


>sp|RL6_PYRAE|LARGE ribosomal subunit protein uL6|Pyrobaculum aerophilum (strain ATCC

Query: 1 GNEL-LENFLG 10
GN+L +ENFLG
Sbjct: 109 GNQLVIENFLG 119


>sp|GUAAA_METJA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocaldococcus

Query: 1 GNELLENF 8
GNE+L+NF
Sbjct: 172 GNEILKNF 179


>sp|RL6_NANEQ|LARGE ribosomal subunit protein uL6|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GNELL-ENFLG 10
GN+L+ ENFLG
Sbjct: 104 GNKLIVENFLG 114


>sp|GUAAA_METBF|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina barkeri

Query: 1 GNELLENFL 9
G ELL NFL
Sbjct: 175 GEELLTNFL 183


>sp|RL6_NATPD|LARGE ribosomal subunit protein uL6|Natronomonas pharaonis (strain ATCC

Query: 1 GNELLENFLG 10
G+ ++ENFLG
Sbjct: 100 GDIVIENFLG 109


>sp|GUAAA_HALMA|GMP synthase [glutamine-hydrolyzing] subunit A|Haloarcula marismortui

Query: 1 GNELLENFL 9
G E+ ENFL
Sbjct: 170 GEEVFENFL 178


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 GNELLENFL 9
G ++LENFL
Sbjct: 186 GRDILENFL 194


>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GNELLEN 7
GNE LEN
Sbjct: 205 GNEFLEN 211


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GNELLENFLG 10
G ELL F+G
Sbjct: 50 GKELLHEFIG 59


>sp|GUAAA_METAC|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina

Query: 1 GNELLENFL 9
G+ELL NF
Sbjct: 175 GDELLTNFF 183


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 GNELLENFLG 10
G+EL++ F+G
Sbjct: 219 GSELVQKFIG 228


>sp|RS17E_METVS|SMALL ribosomal subunit protein eS17|Methanococcus vannielii (strain

Query: 1 GNELLENFLG 10
G EL+E F G
Sbjct: 13 GEELIEKFAG 22


>sp|Y986_METJA|UNCHARACTERIZED protein MJ0986|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ELLENFLG 10
EL+ENF G
Sbjct: 34 ELIENFRG 41


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNELLENFLG 10
G E ++NFLG
Sbjct: 436 GEESIKNFLG 445


>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 3 ELLENFLG 10
+ LENFLG
Sbjct: 40 DTLENFLG 47


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 3 ELLENFLG 10
EL+ENF G
Sbjct: 325 ELVENFTG 332


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ELLENFLG 10
EL+ENF G
Sbjct: 325 ELVENFTG 332


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 3 ELLENFLG 10
EL+ENF G
Sbjct: 325 ELVENFTG 332


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GNELLENFL 9
G EL+ NFL
Sbjct: 403 GRELITNFL 411


>sp|RL6_THEGJ|LARGE ribosomal subunit protein uL6|Thermococcus gammatolerans (strain

Query: 1 GNE-LLENFLG 10
G+E ++ENFLG
Sbjct: 105 GDEVIIENFLG 115


>sp|RL6_PYRHO|LARGE ribosomal subunit protein uL6|Pyrococcus horikoshii (strain ATCC

Query: 1 GNE-LLENFLG 10
G+E ++ENFLG
Sbjct: 105 GDEVIIENFLG 115


>sp|RL6_PYRFU|LARGE ribosomal subunit protein uL6|Pyrococcus furiosus (strain ATCC

Query: 1 GNE-LLENFLG 10
G+E ++ENFLG
Sbjct: 105 GDEVIIENFLG 115


>sp|RL6_PYRAB|LARGE ribosomal subunit protein uL6|Pyrococcus abyssi (strain GE5 /

Query: 1 GNE-LLENFLG 10
G+E ++ENFLG
Sbjct: 105 GDEVIIENFLG 115


>sp|RL6_HALWD|LARGE ribosomal subunit protein uL6|Haloquadratum walsbyi (strain DSM

Query: 1 GNE-LLENFLG 10
G+E ++ENFLG
Sbjct: 104 GDEVIIENFLG 114


>sp|Y675_METJA|UNCHARACTERIZED protein MJ0675|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNELLENFL 9
G E ENFL
Sbjct: 95 GKEFAENFL 103


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 3 ELLENFLG 10
EL+ENF G
Sbjct: 325 ELVENFTG 332


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ELLENFLG 10
EL+ENF G
Sbjct: 325 ELVENFTG 332


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GNELLEN 7
GNE LEN
Sbjct: 201 GNEYLEN 207


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 GNELLENFLG 10
G+EL++ F+G
Sbjct: 215 GSELVKKFIG 224


>sp|RL6_THEON|LARGE ribosomal subunit protein uL6|Thermococcus onnurineus (strain NA1)

Query: 1 GNEL-LENFLG 10
G+E+ +ENFLG
Sbjct: 105 GDEVVIENFLG 115


>sp|RL6_THEKO|LARGE ribosomal subunit protein uL6|Thermococcus kodakarensis (strain

Query: 1 GNEL-LENFLG 10
G+E+ +ENFLG
Sbjct: 105 GDEVVIENFLG 115


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 GNELLENFLG 10
G+EL++ F+G
Sbjct: 215 GSELVKKFIG 224


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNELLENFLG 10
G E + NFLG
Sbjct: 441 GEENIRNFLG 450


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NELLENFL 9
N+LLE+FL
Sbjct: 115 NKLLESFL 122


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 GNELLENFLG 10
G+EL++ F+G
Sbjct: 215 GSELVKKFIG 224


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GNELLENFLG 10
G+EL++ F+G
Sbjct: 215 GSELVKKFIG 224


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GNELLENFLG 10
G+EL++ F+G
Sbjct: 215 GSELVKKFIG 224


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNELLENFLG 10
G+EL++ F+G
Sbjct: 237 GSELVKKFIG 246


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 GNELLENFLG 10
G+EL+ F+G
Sbjct: 219 GSELVRKFIG 228


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GNELLENFLG 10
G+EL+ F+G
Sbjct: 205 GSELVRKFIG 214


>sp|GUAAA_METTP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothrix

Query: 1 GNELLENFL 9
G E+ +NFL
Sbjct: 168 GEEVFDNFL 176


>sp|Y855_SACI1|PROTEIN YN1551_0855|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 NELLENF 8
NELL NF
Sbjct: 221 NELLNNF 227


>sp|Y2104_SACI2|PROTEIN LS215_2104|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NELLENF 8
NELL NF
Sbjct: 221 NELLNNF 227


>sp|Y2063_SACI7|PROTEIN YG5714_2063|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NELLENF 8
NELL NF
Sbjct: 221 NELLNNF 227


>sp|Y2019_SACI3|PROTEIN M1627_2019|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 NELLENF 8
NELL NF
Sbjct: 221 NELLNNF 227


>sp|Y1949_SACI6|PROTEIN M164_1949|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NELLENF 8
NELL NF
Sbjct: 221 NELLNNF 227


>sp|Y1941_SACI4|PROTEIN M1425_1941|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NELLENF 8
NELL NF
Sbjct: 221 NELLNNF 227


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GNELLENFLG 10
G+EL+ F+G
Sbjct: 206 GSELVNKFIG 215


>sp|RL6_HALMA|LARGE ribosomal subunit protein uL6|Haloarcula marismortui (strain ATCC

Query: 1 GNEL-LENFLG 10
G+E+ +ENFLG
Sbjct: 100 GDEVVIENFLG 110


>sp|RL6_METTH|LARGE ribosomal subunit protein uL6|Methanothermobacter

Query: 4 LLENFLG 10
++ENFLG
Sbjct: 108 VIENFLG 114


>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 4 LLENFLG 10
++ENFLG
Sbjct: 114 VIENFLG 120


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GNELLENFLG 10
G+EL+ F+G
Sbjct: 215 GSELVHKFIG 224


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GNELLENFLG 10
G+EL+ F+G
Sbjct: 205 GSELVRKFIG 214


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 GNELLENFLG 10
G+EL+ F+G
Sbjct: 217 GSELVHKFIG 226


>sp|RL6_PICTO|LARGE ribosomal subunit protein uL6|Picrophilus torridus (strain ATCC

Query: 4 LLENFLG 10
++ENFLG
Sbjct: 108 IVENFLG 114


>sp|ARGB_METTP|ACETYLGLUTAMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 NELLENFL 9
+E+LENF+
Sbjct: 34 HEILENFI 41


>sp|RL6_METKA|LARGE ribosomal subunit protein uL6|Methanopyrus kandleri (strain AV19 /

Query: 1 GNELLENFLG 10
G +ENF+G
Sbjct: 125 GKVYIENFMG 134


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 GNELLENFLG 10
G+EL+ F+G
Sbjct: 206 GSELVRKFIG 215


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GNELLENFLG 10
G+EL++ ++G
Sbjct: 226 GSELVQKYIG 235


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GNELLENFLG 10
G+EL++ ++G
Sbjct: 220 GSELVQKYIG 229


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 GNELLENFLG 10
G+EL++ ++G
Sbjct: 245 GSELVQKYIG 254


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GNELLENFLG 10
G+EL++ ++G
Sbjct: 226 GSELVQKYIG 235


>sp|CAS6A_METJA|CRISPR-ASSOCIATED endoribonuclease Cas6 1|Methanocaldococcus jannaschii (strain

Query: 2 NELLENFLG 10
NE +ENF+
Sbjct: 88 NEFIENFVA 96


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GNELLENFLG 10
G+EL++ ++G
Sbjct: 226 GSELVQKYIG 235


>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 1 GNELLEN 7
G ELLEN
Sbjct: 385 GKELLEN 391


>sp|DTDA_PYRHO|D-AMINOACYL-TRNA deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NELLENF 8
N+L+ENF
Sbjct: 18 NKLIENF 24


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GNELLENFLG 10
G+EL++ ++G
Sbjct: 220 GSELVQKYIG 229




82|SequenceR|415|406|PWVSIGNELL

>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PWVSIGN 7
PW+ +GN
Sbjct: 740 PWIGVGN 746


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WVSIGNE 8
W+ IGNE
Sbjct: 446 WIDIGNE 452


>sp|OTC_METST|ORNITHINE carbamoyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 WVSIGNE 8
WVS+G+E
Sbjct: 222 WVSMGDE 228


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 WVSIGNE 8
WVS+G+E
Sbjct: 222 WVSMGDE 228


>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 WVSIGNE 8
WVS+G+E
Sbjct: 223 WVSMGDE 229


>sp|OTC_METMA|ORNITHINE carbamoyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WVSIGNE 8
WVS+G+E
Sbjct: 223 WVSMGDE 229


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 WVSIGNE 8
WVS+G+E
Sbjct: 233 WVSMGDE 239


>sp|OTC_METBF|ORNITHINE carbamoyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 WVSIGNE 8
WVS+G+E
Sbjct: 223 WVSMGDE 229


>sp|OTC_METAC|ORNITHINE carbamoyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WVSIGNE 8
WVS+G+E
Sbjct: 223 WVSMGDE 229


>sp|Y096_PYRAR|PROTEIN Pars_0096|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 VSIGNELL 10
+S+GNELL
Sbjct: 9 ISVGNELL 16


>sp|Y1980_AERPE|PROTEIN APE_1980.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 VSIGNELL 10
+S+GNELL
Sbjct: 10 ISVGNELL 17


>sp|Y2048_ARCFU|UNCHARACTERIZED protein AF_2048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WVSIGNE 8
W+ +GNE
Sbjct: 212 WIRVGNE 218


>sp|Y2251_ARCFU|PROTEIN AF_2251|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VSIGNELL 10
+S+GNE+L
Sbjct: 6 ISVGNEIL 13


>sp|Y2121_METS5|PROTEIN Msed_2121|Metallosphaera sedula (strain ATCC 51363

Query: 3 VSIGNELL 10
++IGNELL
Sbjct: 8 LTIGNELL 15


>sp|OTC_HYPBU|ORNITHINE carbamoyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 WVSIGNELL 10
WVS+G E L
Sbjct: 234 WVSMGEESL 242


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WVSIGNE 8
WVS+G E
Sbjct: 228 WVSMGQE 234


>sp|OTC_STAMF|ORNITHINE carbamoyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 WVSIGNE 8
WVS+G E
Sbjct: 235 WVSMGQE 241


>sp|OTC_SULAC|ORNITHINE carbamoyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WVSIGNE 8
WVS+G E
Sbjct: 228 WVSMGQE 234


>sp|TYW32_THEKO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 VSIGNELL 10
V IGNE+L
Sbjct: 162 VEIGNEML 169


>sp|TYW32_PYRAB|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 VSIGNELL 10
V IGNE+L
Sbjct: 162 VEIGNEML 169


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 1 PWVSIGNEL 9
PW +IG++L
Sbjct: 109 PWRNIGSKL 117


>sp|OTC_AERPE|ORNITHINE carbamoyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 WVSIGNE 8
WVS+G E
Sbjct: 235 WVSMGQE 241


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WVSIGNE 8
WVS+G E
Sbjct: 229 WVSMGQE 235


>sp|Y1508_SULAC|PROTEIN Saci_1508|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VSIGNELL 10
++IGNE+L
Sbjct: 9 ITIGNEIL 16


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 VSIGNELL 10
V+IGNE+L
Sbjct: 9 VTIGNEVL 16


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 VSIGNELL 10
V+IGNE+L
Sbjct: 9 VTIGNEVL 16


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 VSIGNELL 10
V+IGNE+L
Sbjct: 9 VTIGNEVL 16


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 3 VSIGNELL 10
V+IGNE+L
Sbjct: 9 VTIGNEVL 16


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 3 VSIGNELL 10
V+IGNE+L
Sbjct: 9 VTIGNEVL 16


>sp|Y875_PYRAE|PROTEIN PAE0875|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VSIGNELL 10
+S+GNELL
Sbjct: 8 LSVGNELL 15


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PWVSIGN 7
PWV GN
Sbjct: 202 PWVGGGN 208


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PWVSIGN 7
PWV GN
Sbjct: 200 PWVGGGN 206


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PWVSIGN 7
PWV GN
Sbjct: 198 PWVGGGN 204


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PWVSIGN 7
PWV GN
Sbjct: 198 PWVGGGN 204


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PWVSIGN 7
PWV GN
Sbjct: 201 PWVGGGN 207


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PWVSIGN 7
PWV GN
Sbjct: 201 PWVGGGN 207


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 VSIGNELL 10
++IGNE+L
Sbjct: 6 ITIGNEIL 13


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 VSIGNELL 10
V+IGNE+L
Sbjct: 9 VTIGNEVL 16


>sp|UPPS_HALMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Haloarcula

Query: 1 PWVSIGNE 8
PW + GNE
Sbjct: 215 PWHANGNE 222


>sp|OTC_METHJ|ORNITHINE carbamoyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 WVSIGNE 8
W+S+G E
Sbjct: 223 WISMGQE 229


>sp|Y062_PYRCJ|PROTEIN Pcal_0062|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 VSIGNELL 10
+++GNELL
Sbjct: 7 ITVGNELL 14


>sp|RLME_NATPD|RIBOSOMAL RNA large subunit methyltransferase|Natronomonas pharaonis

Query: 2 WVSIGNEL 9
W+ + NEL
Sbjct: 50 WLQVANEL 57


>sp|OTC_HALWD|ORNITHINE carbamoyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 WVSIGNE 8
W+S+G E
Sbjct: 221 WISMGQE 227


>sp|TYW32_PYRHO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 VSIGNELL 10
+SIGN++L
Sbjct: 162 ISIGNKML 169


>sp|OTC_METLZ|ORNITHINE carbamoyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 2 WVSIGNE 8
W+S+G E
Sbjct: 223 WISMGEE 229


>sp|OTCC_THEVO|ORNITHINE carbamoyltransferase, catabolic|Thermoplasma volcanium (strain ATCC

Query: 2 WVSIGNE 8
W+S+G E
Sbjct: 225 WISMGEE 231


>sp|Y103_SACS2|PROTEIN SSO0103|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VSIGNELL 10
++IGNE+L
Sbjct: 17 ITIGNEVL 24


>sp|Y487_THEAC|PROTEIN Ta0487|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VSIGNELL 10
+++GNE+L
Sbjct: 7 ITVGNEIL 14


>sp|Y1413_SULTO|PROTEIN STK_14130|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VSIGNELL 10
++IGNE+L
Sbjct: 9 INIGNEIL 16


>sp|RL3_CALMQ|LARGE ribosomal subunit protein uL3|Caldivirga maquilingensis (strain

Query: 2 WVSIGNEL 9
WV+I NE+
Sbjct: 106 WVNIPNEV 113




83|SequenceR|420|411|TELYGPWVSI

>sp|UVRC_METHJ|UVRABC system protein C|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LYGPWVS 9
LYGP+VS
Sbjct: 124 LYGPFVS 130


>sp|GCH32_HALSA|GTP cyclohydrolase III 2|Halobacterium salinarum (strain ATCC 700922

Query: 4 YGPWVS 9
YGPW +
Sbjct: 9 YGPWTT 14


>sp|MNTP_METMJ|MANGANESE exporter MntP|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 YGPWVS 9
YGPW++
Sbjct: 68 YGPWIA 73


>sp|RADB_THEGJ|DNA repair and recombination protein|Thermococcus gammatolerans

Query: 1 TELYGPWVS 9
T++YGP+ +
Sbjct: 23 TQIYGPYAT 31


>sp|RADB_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 TELYGP 6
T+LYGP
Sbjct: 29 TQLYGP 34


>sp|RADB_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 TELYGP 6
T+LYGP
Sbjct: 29 TQLYGP 34


>sp|MBD_THEAC|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma acidophilum (strain

Query: 3 LYGPWVS 9
YG WVS
Sbjct: 268 FYGTWVS 274


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TELYGPW 7
T++Y PW
Sbjct: 689 TDMYAPW 695


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LYGPWV 8
LYGP+V
Sbjct: 299 LYGPYV 304


>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ELYGPWVS 9
E YG W++
Sbjct: 407 ERYGAWIA 414


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 4 YGPWV 8
+GPW+
Sbjct: 321 FGPWI 325


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 1 TELYGPW 7
TEL+G W
Sbjct: 355 TELFGHW 361


>sp|TSGAD_HALVD|PUTATIVE ABC transporter glucose-binding protein|Haloferax volcanii (strain

Query: 1 TELYGP 6
TE YGP
Sbjct: 300 TEFYGP 305


>sp|NEP1_PYRAR|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum arsenaticum (strain

Query: 1 TELYGPWV 8
TEL G WV
Sbjct: 141 TELGGRWV 148


>sp|Y600_METMP|PROBABLE minor pilin MMP0600|Methanococcus maripaludis (strain DSM 14266

Query: 1 TELYGPWVSI 10
T LY W+ I
Sbjct: 76 TNLYNAWLQI 85




84|SequenceR|425|416|LSSQMTELYG

>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SQMTELY 9
SQ+TELY
Sbjct: 447 SQLTELY 453


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SQMTELY 9
SQ+TELY
Sbjct: 447 SQLTELY 453


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 SQMTELY 9
SQ+TELY
Sbjct: 447 SQLTELY 453


>sp|Y1317_METJA|UNCHARACTERIZED MFS-type transporter MJ1317|Methanocaldococcus jannaschii (strain

Query: 1 LSSQMTELYG 10
+S +MT LYG
Sbjct: 375 ISPEMTFLYG 384


>sp|SLAB_SACS2|S-LAYER protein B|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LSSQMTELYG 10
LSSQ+T L G
Sbjct: 332 LSSQVTALNG 341


>sp|TOP6A_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSSQMTELYG 10
L QMT+++G
Sbjct: 294 LGVQMTDIFG 303


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LSSQMTELYG 10
S MT++YG
Sbjct: 242 FSKAMTQIYG 251


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 1 LSSQMTELY 9
++SQ+T LY
Sbjct: 553 IASQLTSLY 561


>sp|Y1201_ARCFU|UNCHARACTERIZED protein AF_1201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSSQMTELYG 10
L ++TELYG
Sbjct: 61 LLRELTELYG 70




85|SequenceR|430|421|SYLQELSSQM

>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SYLQELSSQM 10
SY+QEL Q+
Sbjct: 741 SYIQELERQL 750


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 YLQELSSQ 9
YLQEL+S+
Sbjct: 822 YLQELASK 829


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 SYLQELSSQ 9
SYL+EL Q
Sbjct: 446 SYLEELHDQ 454


>sp|Y1317_METJA|UNCHARACTERIZED MFS-type transporter MJ1317|Methanocaldococcus jannaschii (strain

Query: 1 SYLQELSSQM 10
S+L ++SS+M
Sbjct: 31 SFLNDMSSEM 40




86|SequenceR|435|426|MEDYKSYLQE

>sp|Y1005_METKA|PUTATIVE HTH-type transcriptional regulatory protein|Methanopyrus kandleri

Query: 1 MEDYKSYLQE 10
+ED K YLQE
Sbjct: 268 LEDLKEYLQE 277


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 1 MEDYKSYLQE 10
+++YKSY+ E
Sbjct: 465 VDEYKSYVDE 474


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 1 MEDYKSYLQE 10
+E+Y+ +LQE
Sbjct: 447 VENYQKWLQE 456


>sp|TPIS_METBF|TRIOSEPHOSPHATE isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DYKSYLQ 9
+YK+YLQ
Sbjct: 9 NYKTYLQ 15


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 3 DYKSYLQ 9
DYKSYL+
Sbjct: 178 DYKSYLR 184


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 3 DYKSYLQ 9
DYKSYL+
Sbjct: 220 DYKSYLR 226


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 3 DYKSYLQE 10
DY++YL E
Sbjct: 377 DYRNYLSE 384


>sp|HTPX_THEAC|PROTEASE HtpX homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EDYKSYLQE 10
EDY+ L+E
Sbjct: 277 EDYRKLLEE 285


>sp|ARSA_METTH|PUTATIVE arsenical pump-driving ATPase|Methanothermobacter

Query: 1 MEDYKSYLQE 10
ME+Y++ LQE
Sbjct: 86 MEEYQAKLQE 95


>sp|AATC_METTH|A-TYPE ATP synthase subunit C|Methanothermobacter thermautotrophicus

Query: 1 MEDYKSYLQ 9
ME++K+YL+
Sbjct: 78 MEEFKNYLR 86


>sp|TRPC_THEVO|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MEDYKSYLQE 10
+EDY SY+ E
Sbjct: 59 IEDYLSYVME 68


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EDYKSYLQE 10
EDY+ Y++E
Sbjct: 564 EDYEEYIEE 572


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii (strain

Query: 1 MEDYKSYLQE 10
+E+YK +QE
Sbjct: 339 IEEYKKIIQE 348




87|SequenceR|440|431|TFLISMEDYK

>sp|RIFK_PYRAR|RIBOFLAVIN kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FLISMEDYK 10
F IS+E YK
Sbjct: 97 FYISLEGYK 105




88|SequenceR|445|436|ETVLVTFLIS

>sp|TRPA_METVS|TRYPTOPHAN synthase alpha chain|Methanococcus vannielii (strain ATCC 35089

Query: 3 VLVTFLIS 10
VLV+FL+S
Sbjct: 5 VLVSFLVS 12


>sp|TRPA_METMP|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain DSM 14266

Query: 3 VLVTFLIS 10
VLV+FL+S
Sbjct: 5 VLVSFLVS 12


>sp|TRPA_METM7|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C7 /

Query: 3 VLVTFLIS 10
VLV+FL+S
Sbjct: 5 VLVSFLVS 12


>sp|TRPA_METM6|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C6 /

Query: 3 VLVTFLIS 10
VLV+FL+S
Sbjct: 5 VLVSFLVS 12


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 3 VLVTFLIS 10
VLV+FL+S
Sbjct: 5 VLVSFLVS 12




89|SequenceR|450|441|NELTTETVLV

>sp|RNP1_HALMA|RIBONUCLEASE P protein component 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 ELTTETVLV 10
+L+TETVLV
Sbjct: 64 DLSTETVLV 72


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ELTTETVL 9
ELTTET L
Sbjct: 436 ELTTETDL 443


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ELTTETVL 9
ELTTET L
Sbjct: 436 ELTTETDL 443


>sp|Y1170_METJA|UPF0145 protein MJ1170|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NELTTETV 8
NELTTE +
Sbjct: 57 NELTTEII 64




90|SequenceR|455|446|LHILGNELTT

>sp|RLMH_METMP|PUTATIVE ribosomal RNA large subunit|Methanococcus maripaludis (strain DSM

Query: 1 LHILGNELTT 10
L ILG ELT+
Sbjct: 76 LEILGKELTS 85


>sp|RLMH_METM7|PUTATIVE ribosomal RNA large subunit|Methanococcus maripaludis (strain C7

Query: 1 LHILGNELTT 10
L ILG ELT+
Sbjct: 76 LEILGKELTS 85


>sp|RLMH_METM6|PUTATIVE ribosomal RNA large subunit|Methanococcus maripaludis (strain C6

Query: 1 LHILGNELTT 10
L ILG ELT+
Sbjct: 76 LEILGKELTS 85


>sp|RS13_PYRAE|SMALL ribosomal subunit protein uS13|Pyrobaculum aerophilum (strain

Query: 1 LHILGNEL 8
LH++G+EL
Sbjct: 91 LHLIGSEL 98


>sp|RS13_PYRCJ|SMALL ribosomal subunit protein uS13|Pyrobaculum calidifontis (strain

Query: 1 LHILGNEL 8
LH++G+EL
Sbjct: 91 LHLIGSEL 98


>sp|RS13_AERPE|SMALL ribosomal subunit protein uS13|Aeropyrum pernix (strain ATCC 700893

Query: 1 LHILGNEL 8
LH++G+EL
Sbjct: 94 LHLIGSEL 101


>sp|RL3_SACS2|LARGE ribosomal subunit protein uL3|Saccharolobus solfataricus (strain

Query: 1 LHILGNELT 9
L+ILG E+T
Sbjct: 196 LNILGKEIT 204


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 LHILGNELT 9
+H LGNE +
Sbjct: 625 IHALGNEYS 633


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 HILGNELT 9
HI+G +LT
Sbjct: 107 HIVGTDLT 114


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 HILGNELT 9
HI+G +LT
Sbjct: 107 HIVGTDLT 114


>sp|RLMH_METM5|PUTATIVE ribosomal RNA large subunit|Methanococcus maripaludis (strain C5

Query: 1 LHILGNELTT 10
L ILG E+T+
Sbjct: 76 LEILGKEVTS 85


>sp|RS3A_METMA|SMALL ribosomal subunit protein eS1|Methanosarcina mazei (strain ATCC

Query: 3 ILGNELTT 10
++G+ELTT
Sbjct: 82 LMGHELTT 89


>sp|RS3A_METBF|SMALL ribosomal subunit protein eS1|Methanosarcina barkeri (strain

Query: 3 ILGNELTT 10
++G+ELTT
Sbjct: 82 LMGHELTT 89


>sp|RS3A_METAC|SMALL ribosomal subunit protein eS1|Methanosarcina acetivorans (strain

Query: 3 ILGNELTT 10
++G+ELTT
Sbjct: 82 LMGHELTT 89


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LHILGNELT 9
L +LG ELT
Sbjct: 147 LDVLGRELT 155


>sp|SECF_THEGJ|PROTEIN-EXPORT membrane protein SecF|Thermococcus gammatolerans (strain DSM 15229

Query: 3 ILGNELTT 10
ILG ELTT
Sbjct: 198 ILGIELTT 205


>sp|RS13_PYRAR|SMALL ribosomal subunit protein uS13|Pyrobaculum arsenaticum (strain

Query: 1 LHILGNEL 8
+H++G+EL
Sbjct: 91 MHLIGSEL 98


>sp|ARSR_HALSA|PUTATIVE arsenical resistance operon repressor|Halobacterium salinarum

Query: 1 LHILGNEL 8
LHI G EL
Sbjct: 64 LHIAGEEL 71


>sp|RS13_METMJ|SMALL ribosomal subunit protein uS13|Methanoculleus marisnigri (strain

Query: 2 HILGNELT 9
H+LG +LT
Sbjct: 93 HLLGTDLT 100




91|SequenceR|460|451|TDRSRLHILG

>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 5 RLHILG 10
RLHILG
Sbjct: 144 RLHILG 149


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 DRSRLHILG 10
D S LH++G
Sbjct: 474 DESNLHVIG 482


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 TDRSRLHILG 10
TDR ++ ILG
Sbjct: 543 TDRKKILILG 552


>sp|END4_HALWD|PROBABLE endonuclease 4|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DRSRLHILG 10
DRS++H +G
Sbjct: 53 DRSQMHDIG 61


>sp|Y292_METJA|UNCHARACTERIZED protein MJ0292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SRLHILG 10
+R+HILG
Sbjct: 43 ARIHILG 49


>sp|RNP2_METMA|RIBONUCLEASE P protein component 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RSRLHILG 10
R+ LH+LG
Sbjct: 88 RATLHVLG 95


>sp|RNP2_METAC|RIBONUCLEASE P protein component 2|Methanosarcina acetivorans (strain ATCC

Query: 3 RSRLHILG 10
R+ LH+LG
Sbjct: 88 RATLHVLG 95




92|SequenceR|465|456|MEKMTTDRSR

***** No hits found ******


93|SequenceR|470|461|KSIHMMEKMT

>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KSIHMMEKM 9
K+++MM+KM
Sbjct: 192 KAVNMMKKM 200


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KSIHMMEKM 9
K+++MM+KM
Sbjct: 192 KAVNMMKKM 200




94|SequenceR|475|466|LFDKLKSIHM

>sp|DAPA_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FDKLKSIH 9
FDK K IH
Sbjct: 223 FDKAKEIH 230


>sp|DAPA_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FDKLKSIH 9
FDK K IH
Sbjct: 223 FDKAKEIH 230


>sp|DAPA_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 FDKLKSIH 9
FDK K IH
Sbjct: 223 FDKAKEIH 230


>sp|DAPA_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 FDKLKSIH 9
FDK K IH
Sbjct: 223 FDKAKEIH 230


>sp|DAPA_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 FDKLKSIH 9
FDK K IH
Sbjct: 223 FDKAKEIH 230


>sp|G1PDH_PICTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Picrophilus torridus (strain ATCC 700027

Query: 2 FDKLKSIH 9
F+K+KS+H
Sbjct: 3 FNKIKSMH 10


>sp|Y2354_ARCFU|UNCHARACTERIZED protein AF_2354|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LFDKLKSIH 9
L+D+LK IH
Sbjct: 72 LYDELKRIH 80


>sp|WECB_METJA|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFDKLKS 7
LFDKLKS
Sbjct: 253 LFDKLKS 259


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 LFDKLKSI 8
+F+KLKSI
Sbjct: 31 IFEKLKSI 38


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 LFDKLKSI 8
+F+KLKSI
Sbjct: 31 IFEKLKSI 38


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LFDKLKS 7
+FDKLKS
Sbjct: 226 VFDKLKS 232


>sp|PDXT_METLZ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanocorpusculum labreanum

Query: 1 LFDKLKSIHM 10
LF+KL+S+ M
Sbjct: 61 LFEKLRSLIM 70


>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 1 LFDKLKSIH 9
L DK+++IH
Sbjct: 118 LVDKIRNIH 126


>sp|RL22_PYRHO|LARGE ribosomal subunit protein uL22|Pyrococcus horikoshii (strain ATCC

Query: 3 DKLKSIHM 10
DKLK IH+
Sbjct: 110 DKLKIIHI 117


>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 1 LFDKLKSIH 9
L DK+++IH
Sbjct: 126 LVDKIRNIH 134


>sp|RL22_PYRFU|LARGE ribosomal subunit protein uL22|Pyrococcus furiosus (strain ATCC

Query: 3 DKLKSIHM 10
DKLK IH+
Sbjct: 110 DKLKIIHI 117


>sp|END4_METST|PROBABLE endonuclease 4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FDKLKSIHM 10
D+LK+IH+
Sbjct: 204 LDRLKAIHL 212


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 FDKLKSI 8
FDK+KS+
Sbjct: 35 FDKVKSV 41


>sp|RIFK_METST|RIBOFLAVIN kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LFDKLKSIH 9
L DKLK IH
Sbjct: 56 LHDKLKRIH 64


>sp|RL22_METS5|LARGE ribosomal subunit protein uL22|Metallosphaera sedula (strain ATCC

Query: 3 DKLKSIHM 10
DKLK +H+
Sbjct: 113 DKLKVVHI 120


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFDKLKSIHM 10
L DKLKS+++
Sbjct: 49 LIDKLKSLNI 58




95|SequenceR|485|471|VNKASSIYKILFDKL

>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VNKASSIYKILFDKL 15
V++A +IYK FD+L
Sbjct: 177 VDEAINIYKAFFDEL 191


>sp|PUR7_THEVO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VNKASSIYKILFDKL 15
V+K S +Y+++F+K+
Sbjct: 275 VSKVSDLYRMMFEKI 289


>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNKASSIYKILFDKL 15
V +A SIYK FD L
Sbjct: 167 VKEAISIYKKFFDTL 181


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VNKASSIYKILFDKL 15
V +A IYK +FD++
Sbjct: 181 VREAVEIYKKIFDEM 195


>sp|SYP_PYRNV|PROLINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VNKASSIYKILFDKL 15
V +A IYK +FD++
Sbjct: 180 VREAVEIYKRIFDEM 194


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VNKASSIYKILFDKL 15
V +A IYK +FD++
Sbjct: 181 VREAVEIYKRIFDEM 195


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VNKASSIYKILFDKL 15
V +A IYK +FD++
Sbjct: 181 VREAVEIYKRIFDEM 195


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VNKASSIYKILFDKL 15
V A +IYK FD++
Sbjct: 168 VQTALNIYKTFFDRM 182


Query: 1 VNKASSIYKIL 11
+NKA IYK L
Sbjct: 297 MNKAKEIYKSL 307


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VNKASSIYKILFDKL 15
V +A +YK +FD+L
Sbjct: 179 VLEAIEVYKAIFDRL 193


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 NKASSIYKILFDKL 15
NK IY++++D++
Sbjct: 883 NKKEPIYRMIYDRI 896


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VNKASSIYKILFDKL 15
V +A IYK +FD L
Sbjct: 177 VEEAIEIYKKIFDTL 191


>sp|SYP_PYRIL|PROLINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VNKASSIYKILFDKL 15
+ +A IYK +FD++
Sbjct: 181 IREAVEIYKRIFDEM 195


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 KASSIYKILFDKL 15
+A IYK +FD+L
Sbjct: 176 EAIEIYKKVFDRL 188


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 ASSIYKILFDKL 15
A Y ILFD+L
Sbjct: 112 ADRAYDILFDRL 123


>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 2 NKASSIYKILFD 13
N ASSI ++L+D
Sbjct: 174 NGASSIMQLLYD 185


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 2 NKASSIYKILFD 13
N+ SS+YK FD
Sbjct: 12 NEVSSLYKQYFD 23


>sp|RS4E_METS3|SMALL ribosomal subunit protein eS4|Methanobrevibacter smithii (strain

Query: 1 VNKASSIYKILFDK 14
+ K +Y++L DK
Sbjct: 93 IPKTGEVYRVLLDK 106


>sp|GSA1_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 1|Cenarchaeum symbiosum (strain A)

Query: 1 VNKASSIYKILF 12
+N+ +SI+++ F
Sbjct: 343 INRVASIFQVFF 354


>sp|DAPA_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VNKASSIYKIL 11
VNK S +YK L
Sbjct: 168 VNKVSKLYKAL 178


>sp|CDC6A_HALMA|ORC1-TYPE DNA replication protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 7 IYKILFDKL 15
IY +LFD+L
Sbjct: 128 IYNMLFDEL 136


>sp|SYP_METKA|PROLINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VNKASSIYKILFDKL 15
V +A IY FD+L
Sbjct: 185 VKEAVEIYSSFFDEL 199


>sp|RSAMH_PYRHO|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KASSIYKILFDKL 15
K S+Y+I+ DK+
Sbjct: 102 KVKSVYEIIPDKI 114


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKASSIYKILFDKL 15
NKA++IYK L ++
Sbjct: 238 NKANNIYKALLGEV 251


>sp|Y1215_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 2 NKASSIYKILFDKL 15
+ +S + +LFDKL
Sbjct: 127 DPSSGVLNVLFDKL 140


>sp|DUT_METBF|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 7 IYKILFDKL 15
IYK+LF+++
Sbjct: 80 IYKVLFNEI 88


>sp|METE_THEAC|METHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 SSIYKILFDKL 15
SS Y++L+D++
Sbjct: 215 SSDYRLLYDRI 225


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 7 IYKILFDKL 15
IYK FD+L
Sbjct: 173 IYKTFFDEL 181


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VNKASSIYKILFDKL 15
+ +A ++YK FD++
Sbjct: 167 IEEALTLYKAFFDEI 181


>sp|PUR7_METJA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKASSIYKILFDKL 15
KA SIY+I DK+
Sbjct: 17 GKAKSIYEIDDDKV 30


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 1 VNKASSIYKI 10
VN++ SIYK+
Sbjct: 190 VNESHSIYKL 199


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 8 YKILFDKL 15
YK+L DK+
Sbjct: 192 YKVLLDKI 199


>sp|DNAG_METS3|DNA primase DnaG|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VNKASSIYKILFD 13
VN+A IYK + +
Sbjct: 122 VNRAKEIYKNMIE 134


>sp|Y856_METJA|UNCHARACTERIZED protein MJ0856|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNKASSIYKILFDKL 15
VN+ + +I+F+KL
Sbjct: 28 VNRGIKVPEIVFEKL 42


>sp|XPF_SACS2|3'-FLAP repair endonuclease Xpf|Saccharolobus solfataricus (strain ATCC

Query: 3 KASSIYKIL 11
KA IYKIL
Sbjct: 202 KAEDIYKIL 210


>sp|PPAC_METJA|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanocaldococcus jannaschii (strain

Query: 2 NKASSIYKILFDKL 15
+K IYK+L +KL
Sbjct: 228 SKKEDIYKLLEEKL 241


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VNKASSIYKIL 11
V+ ASS+YK L
Sbjct: 611 VDLASSVYKKL 621


>sp|GATD_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma acidophilum (strain ATCC

Query: 3 KASSIYKILFDK 14
KAS+ Y + FD+
Sbjct: 28 KASNGYNMTFDR 39


>sp|Y1225_ARCFU|UNCHARACTERIZED protein AF_1225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VNKASSIYKI 10
+N+ SSIY++
Sbjct: 180 LNRQSSIYRL 189


>sp|DPO4_SULTO|DNA polymerase IV|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VNKASSIYKILFDKL 15
VNK I + FDKL
Sbjct: 199 VNKLIDILSVSFDKL 213


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 ASSIYKILFDKL 15
A +IY I FD +
Sbjct: 207 AGAIYTIAFDTI 218


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 1 VNKASSIYKILFDK 14
VN ++YK +F+K
Sbjct: 482 VNDKKNLYKEIFEK 495


>sp|Y1276_AERPE|UNCHARACTERIZED protein APE_1276|Aeropyrum pernix (strain ATCC 700893

Query: 8 YKILFDKL 15
YK+L DK+
Sbjct: 145 YKVLLDKI 152


>sp|YTF2_SACSH|TFIIB-TYPE zinc finger protein|Saccharolobus shibatae (strain ATCC 51178

Query: 7 IYKILFDK 14
IYK+L+D+
Sbjct: 97 IYKVLYDE 104


>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VNKASSIYK 9
+ KASS YK
Sbjct: 298 ITKASSTYK 306


>sp|RS4E_METJA|SMALL ribosomal subunit protein eS4|Methanocaldococcus jannaschii (strain

Query: 4 ASSIYKILFDK 14
A+ Y++LFD+
Sbjct: 96 ANENYRVLFDR 106


>sp|Y2158_ARCFU|UNCHARACTERIZED protein AF_2158|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NKASSIYKILFD 13
K S++YK+L +
Sbjct: 40 QKYSTVYKVLMN 51


>sp|DUT_METMA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 7 IYKILFDKL 15
IYK++F+++
Sbjct: 80 IYKVIFNEI 88




96|SequenceR|485|476|VNKASSIYKI

>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 1 VNKASSIYKI 10
VN++ SIYK+
Sbjct: 190 VNESHSIYKL 199


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VNKASSIYK 9
+NKA IYK
Sbjct: 297 MNKAKEIYK 305


>sp|DAPA_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VNKASSIYK 9
VNK S +YK
Sbjct: 168 VNKVSKLYK 176


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VNKASSIYK 9
V+ ASS+YK
Sbjct: 611 VDLASSVYK 619


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKASSIYK 9
NKA++IYK
Sbjct: 238 NKANNIYK 245


>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VNKASSIYK 9
+ KASS YK
Sbjct: 298 ITKASSTYK 306


>sp|DNAG_METS3|DNA primase DnaG|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VNKASSIYK 9
VN+A IYK
Sbjct: 122 VNRAKEIYK 130




THE END