DPOG1_HUMAN Blast Output
Viruses
1|Sequence|1|10|MSRLLWRKVA

>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)

Query: 1 MSRLLWR 7
++RLLWR
Sbjct: 241 LNRLLWR 247


>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)

Query: 1 MSRLLWR 7
++RLLWR
Sbjct: 291 LNRLLWR 297


>sp|MATRX_RINDR|MATRIX protein|Rinderpest virus (strain RBOK) (RDV)

Query: 1 MSRLLWR 7
++RLLWR
Sbjct: 291 LNRLLWR 297


>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 MSRLLWR 7
++RLLWR
Sbjct: 291 LNRLLWR 297


>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)

Query: 1 MSRLLWR 7
++RLLWR
Sbjct: 291 LNRLLWR 297


>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)

Query: 1 MSRLLWR 7
++RLLWR
Sbjct: 291 LNRLLWR 297


>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)

Query: 1 MSRLLWR 7
++RLLWR
Sbjct: 291 LNRLLWR 297


>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 MSRLLWR 7
++RLLWR
Sbjct: 291 LNRLLWR 297


>sp|P2A_CFMVN|POLYPROTEIN P2A|Cocksfoot mottle virus (isolate Dactylis

Query: 1 MSRLLWRKVA 10
MSR+ W K+A
Sbjct: 15 MSRMSWSKLA 24


>sp|RDRP_CFMVN|REPLICASE polyprotein P2AB|Cocksfoot mottle virus (isolate Dactylis

Query: 1 MSRLLWRKVA 10
MSR+ W K+A
Sbjct: 15 MSRMSWSKLA 24


>sp|AC4_TYLCI|PROTEIN C4|Tomato yellow leaf curl virus

Query: 1 MSRLLWRK 8
MSR WRK
Sbjct: 47 MSRPTWRK 54




2|Sequence|6|15|WRKVAGATVG

>sp|POLG_CACV4|GENOME polyprotein|Canine calicivirus (strain 48) (CaCV)

Query: 1 WRKVAGATV 9
W +V GAT+
Sbjct: 1086 WSRVKGATI 1094


>sp|MP1_MCMVK|PROTEIN p31|Maize chlorotic mottle virus (isolate

Query: 1 WRKVAG 6
WR+VAG
Sbjct: 131 WRQVAG 136


>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus

Query: 1 WRKVAGATV 9
W ++ GATV
Sbjct: 1045 WSQIKGATV 1053


>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus

Query: 1 WRKVAGATV 9
W ++ GATV
Sbjct: 1045 WSQIKGATV 1053


>sp|POLG_SMSV4|GENOME polyprotein|San Miguel sea lion virus

Query: 1 WRKVAGATV 9
W ++ GATV
Sbjct: 380 WSQIKGATV 388




3|Sequence|11|20|GATVGPGPVP

>sp|YR648_MIMIV|UNCHARACTERIZED protein R648|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GATVGPGPVP 10
GA +GPGPVP
Sbjct: 25 GAAIGPGPVP 34


>sp|UB403_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus

Query: 5 GPGPVP 10
GPGPVP
Sbjct: 9 GPGPVP 14


>sp|LH3_ADEO7|HEXON-INTERLACING protein LH3|Ovine adenovirus D serotype 7

Query: 1 GATV---GPGPV 9
GATV GPGPV
Sbjct: 80 GATVQLVGPGPV 91


>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)

Query: 2 ATVGPGPV 9
ATV PGPV
Sbjct: 13 ATVAPGPV 20


>sp|009L_FRG3G|PUTATIVE helicase 009L|Frog virus 3 (isolate Goorha)

Query: 3 TVGPGPVP 10
+V PGP+P
Sbjct: 589 SVEPGPLP 596


>sp|VG24_ICHVA|UNCHARACTERIZED protein ORF24|Ictalurid herpesvirus 1 (strain Auburn)

Query: 5 GPGPVP 10
GPGP P
Sbjct: 120 GPGPYP 125


>sp|RDRP_HV19S|PROBABLE RNA-directed RNA polymerase|Helminthosporium victoriae virus-190S

Query: 2 ATVGPGPV 9
AT+ PGPV
Sbjct: 643 ATIKPGPV 650


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 3 TVGPGP 8
T+GPGP
Sbjct: 1183 TLGPGP 1188


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 3 TVGPGP 8
T+GPGP
Sbjct: 1183 TLGPGP 1188


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 VGPGPVP 10
+GP P+P
Sbjct: 373 IGPAPIP 379


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 5 GPGPVP 10
GP PVP
Sbjct: 792 GPNPVP 797




4|Sequence|16|25|PGPVPAPGRW

>sp|VF050_IIV3|UNCHARACTERIZED protein 094L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 PGPVPAPGR 9
P P+P P R
Sbjct: 174 PDPIPEPNR 182


>sp|RDRP_PVXX3|RNA replication protein|Potato virus X (strain X3)

Query: 1 PGPVPAPGRW 10
P P P RW
Sbjct: 574 PTTKPVPARW 583


>sp|RDRP_PVX|RNA replication protein|Potato virus X (PVX)

Query: 1 PGPVPAPGRW 10
P P P RW
Sbjct: 574 PTTKPVPARW 583


>sp|UB403_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus

Query: 1 PGPVPAP 7
PGP P P
Sbjct: 8 PGPGPVP 14


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 PGPVPAPGRW 10
P P PG+W
Sbjct: 739 PPGAPIPGKW 748


>sp|SPAN2_BPKMV|PROBABLE spanin, outer lipoprotein subunit|Pseudomonas phage phiKMV

Query: 1 PGPVPAPGRW 10
PGP P+ RW
Sbjct: 13 PGPTPSARRW 22


>sp|009L_FRG3G|PUTATIVE helicase 009L|Frog virus 3 (isolate Goorha)

Query: 1 PGPVPA 6
PGP+PA
Sbjct: 592 PGPLPA 597


>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 PGPVPAPGRW 10
P P P RW
Sbjct: 234 PSPPKLPPRW 243


>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 PGPVPAPGRW 10
P P P RW
Sbjct: 234 PSPPKLPPRW 243


>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)

Query: 1 PGPVPAPGR 9
P P PAP R
Sbjct: 320 PTPSPAPSR 328


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 1 PGPVPAP 7
PGP P P
Sbjct: 297 PGPDPGP 303


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 PGPVPAP 7
PGP P P
Sbjct: 297 PGPDPGP 303


>sp|ATI2_PSHV1|ALPHA trans-inducing factor|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 PGPVPAPGR 9
PGP+ P R
Sbjct: 67 PGPILGPSR 75


>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)

Query: 1 PGPVPAP 7
P PVP+P
Sbjct: 50 PPPVPSP 56


>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)

Query: 1 PGPVPAP 7
P PVP+P
Sbjct: 50 PPPVPSP 56


>sp|VF233_ASFK5|UNCHARACTERIZED protein H233R|African swine fever virus (isolate

Query: 4 VPAPGRW 10
VP P RW
Sbjct: 121 VPYPSRW 127


>sp|V061_FOWPN|PUTATIVE CC-type chemokine FPV061|Fowlpox virus (strain NVSL) (FPV)

Query: 2 GPVPAP 7
GPVPAP
Sbjct: 37 GPVPAP 42


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 GPVPAPGRW 10
GP PG W
Sbjct: 782 GPGEGPGGW 790


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 GPVPAPGRW 10
GP PG W
Sbjct: 782 GPGEGPGGW 790


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 GPVPAPGRW 10
GP PG W
Sbjct: 782 GPGEGPGGW 790


>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 VPAPGRW 10
VP P +W
Sbjct: 85 VPTPAKW 91


>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P

Query: 1 PGPVPAPG 8
PGPV PG
Sbjct: 184 PGPVLLPG 191


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 4 VPAPGRW 10
VP P +W
Sbjct: 85 VPTPAKW 91


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 4 VPAPGRW 10
VP P +W
Sbjct: 85 VPTPAKW 91


>sp|VF233_ASFWA|UNCHARACTERIZED protein H233R|African swine fever virus (isolate

Query: 4 VPAPGRW 10
+P P RW
Sbjct: 121 IPYPSRW 127


>sp|VF233_ASFP4|UNCHARACTERIZED protein H233R|African swine fever virus (isolate

Query: 4 VPAPGRW 10
+P P RW
Sbjct: 121 IPYPSRW 127


>sp|VF233_ASFB7|UNCHARACTERIZED protein H233R|African swine fever virus (strain

Query: 4 VPAPGRW 10
+P P RW
Sbjct: 121 IPYPSRW 127




5|Sequence|21|30|APGRWVSSSV

>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)

Query: 1 APGRWVSS 8
APG W+SS
Sbjct: 297 APGYWISS 304


>sp|VP3_ROTPC|PROTEIN VP3|Rotavirus C (strain RVC/Pig/United States/Cowden/1980)

Query: 1 APGRWVSS 8
APG W+ S
Sbjct: 297 APGYWIPS 304


>sp|VP3_ROTBS|PROTEIN VP3|Rotavirus C (isolate RVC/Cow/Japan/Shintoku/1991/G2P[3]) (RV-C)

Query: 1 APGRWVSS 8
APG W+ S
Sbjct: 297 APGYWIPS 304


>sp|ACB2_BPPP3|ANTI-CBASS protein 2|Pseudomonas phage PaMx33

Query: 2 PGRWVS 7
PGRW++
Sbjct: 65 PGRWLA 70


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2 PGRWVSS 8
P RW++S
Sbjct: 859 PSRWIAS 865


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2 PGRWVSS 8
P RW++S
Sbjct: 859 PSRWIAS 865


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2 PGRWVSS 8
P RW++S
Sbjct: 859 PSRWIAS 865


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 2 PGRWVSS 8
P RW++S
Sbjct: 859 PSRWIAS 865


>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 APGRWVSSSV 10
APG +V+SSV
Sbjct: 107 APGTYVNSSV 116


>sp|ENV_ALVA|ENVELOPE glycoprotein gp95|Avian leukosis virus subgroup A

Query: 2 PGRWVSSS 9
PG+WV S+
Sbjct: 328 PGKWVDST 335


>sp|BP10_BPT4|BASEPLATE wedge protein gp10|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 APGRW 5
APGRW
Sbjct: 139 APGRW 143


>sp|RP147_FOWPN|DNA-DIRECTED RNA polymerase 147 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 2 PGRWVSSSV 10
PG WV +++
Sbjct: 360 PGDWVETNI 368


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 1 APGRWV 6
+PGRW+
Sbjct: 225 SPGRWL 230


>sp|L_TACVF|RNA-DIRECTED RNA polymerase L|Tacaribe virus (strain Franze-Fernandez) (TCRV)

Query: 3 GRWVSSSV 10
G WV SSV
Sbjct: 1693 GEWVFSSV 1700


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 3 GRWVSSSV 10
G WV SSV
Sbjct: 1684 GEWVFSSV 1691


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 3 GRWVSSSV 10
G WV SSV
Sbjct: 1692 GEWVFSSV 1699


>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)

Query: 2 PGRWVSSSV 10
PGRW ++ V
Sbjct: 2833 PGRWPAADV 2841




6|Sequence|26|35|VSSSVPASDP

>sp|GE_EHV1D|ENVELOPE glycoprotein E|Equine herpesvirus 1 (strain Kentucky

Query: 1 VSSSVPASDP 10
V +SVP++DP
Sbjct: 450 VYTSVPSNDP 459


>sp|GE_EHV1B|ENVELOPE glycoprotein E|Equine herpesvirus 1 (strain Ab4p)

Query: 1 VSSSVPASDP 10
V +SVP++DP
Sbjct: 448 VYTSVPSNDP 457


>sp|GE_EHV1A|ENVELOPE glycoprotein E|Equine herpesvirus 1 (strain AB1)

Query: 1 VSSSVPASDP 10
V +SVP++DP
Sbjct: 448 VYTSVPSNDP 457


>sp|P4_PCVC|UNCHARACTERIZED protein p4|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 1 VSSSVPASDP 10
VSSS P ++P
Sbjct: 391 VSSSTPRTNP 400


>sp|GE_EHV4|ENVELOPE glycoprotein E|Equine herpesvirus 4 (strain 1942)

Query: 1 VSSSVPASDP 10
V +SVP++DP
Sbjct: 153 VYTSVPSNDP 162




7|Sequence|31|40|PASDPSDGQR

>sp|VP22_HHV2H|TEGUMENT protein VP22|Human herpesvirus 2 (strain HG52)

Query: 1 PASDPSDGQR 10
PA+DP+ G+R
Sbjct: 135 PATDPARGRR 144


>sp|VP4_ROTSS|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-SEM/G3P5B[2])

Query: 1 PASDPSDGQ 9
PA+DP++G+
Sbjct: 451 PAADPNNGK 459


>sp|VP4_ROTSH|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Monkey/South

Query: 1 PASDPSDGQ 9
PA+DP++G+
Sbjct: 451 PAADPNNGK 459


>sp|VP4_ROTS1|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-Both/G3P5B[2])

Query: 1 PASDPSDGQ 9
PA+DP++G+
Sbjct: 451 PAADPNNGK 459


>sp|DPOL_FRG3G|PUTATIVE DNA polymerase 060R|Frog virus 3 (isolate Goorha)

Query: 3 SDPSDGQR 10
+DP+DG+R
Sbjct: 433 TDPADGKR 440


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1 PASDPSDG 8
PA+D SDG
Sbjct: 210 PATDCSDG 217


>sp|VP4_ROTTU|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Monkey/United

Query: 1 PASDPSDG 8
PA+DP++G
Sbjct: 451 PAADPNNG 458


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 1 PASDPSDGQ 9
PA DPS G+
Sbjct: 786 PADDPSRGR 794


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 1 PASDPSDGQ 9
PA DPS G+
Sbjct: 786 PADDPSRGR 794


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 1 PASDPSDGQ 9
PA DPS G+
Sbjct: 786 PADDPSRGR 794




8|Sequence|36|45|SDGQRRRQQQ

>sp|KITH_EHV2|THYMIDINE kinase|Equine herpesvirus 2 (strain 86/87)

Query: 1 SDGQRRRQQQ 10
SDG++ +QQQ
Sbjct: 253 SDGEKHKQQQ 262




9|Sequence|41|50|RRQQQQQQQQ

>sp|Y043_TNAVC|STRUCTURAL protein ORF43|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 2 RQQQQQQQQ 10
+QQQQQ+++
Sbjct: 537 KQQQQQRER 545




10|Sequence|46|55|QQQQQQQQQQ

***** No hits found ******


11|Sequence|51|60|QQQQQPQQPQ

>sp|PORTL_PSHV1|PORTAL protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 QQQQPQQPQ 10
QQ QP QP+
Sbjct: 425 QQGQPNQPK 433


>sp|CVC2_EHV2|CAPSID vertex component 2|Equine herpesvirus 2 (strain 86/87)

Query: 2 QQQQPQQP 9
Q+ QPQQP
Sbjct: 408 QRPQPQQP 415




12|Sequence|56|65|PQQPQVLSSE

>sp|DNLI_BPT6|DNA ligase|Enterobacteria phage T6 (Bacteriophage T6)

Query: 1 PQQPQVLSS 9
P+QPQ+L+S
Sbjct: 131 PEQPQMLAS 139


>sp|DNLI_BPT4|DNA ligase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 PQQPQVLSS 9
P+QPQ+L+S
Sbjct: 131 PEQPQMLAS 139


>sp|POLN_CRPVC|REPLICASE polyprotein|Cricket paralysis virus (isolate

Query: 1 PQQPQVLS 8
PQQPQ+L+
Sbjct: 1746 PQQPQILT 1753


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 PQQPQVLSSE 10
P+QP +LS+E
Sbjct: 1509 PKQPAILSAE 1518


>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 1 PQQPQVLSSE 10
P+QP +LS+E
Sbjct: 1510 PKQPAILSAE 1519


>sp|POL_MLVBM|GAG-POL polyprotein|Murine leukemia virus (strain BM5

Query: 1 PQQPQVLSSE 10
P +PQVLS +
Sbjct: 140 PSKPQVLSDD 149


>sp|GAG_MLVBM|GAG polyprotein|Murine leukemia virus (strain BM5

Query: 1 PQQPQVLSSE 10
P +PQVLS +
Sbjct: 140 PSKPQVLSDD 149


>sp|GAG_MSVFR|GAG polyprotein|FBR murine osteosarcoma virus (FBR-MSV)

Query: 1 PQQPQVLSSE 10
P +PQVLS +
Sbjct: 140 PSKPQVLSDD 149




13|Sequence|61|70|VLSSEGGQLR

***** No hits found ******


14|Sequence|66|75|GGQLRHNPLD

>sp|RDRP_LRVLG|PROBABLE RNA-directed RNA polymerase|Leishmania RNA virus 1 -

Query: 3 QLRHNPLD 10
Q +HNP+D
Sbjct: 375 QWQHNPMD 382


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 2 GQLRHNPL 9
GQ+RHN L
Sbjct: 301 GQIRHNLL 308


>sp|CAPSD_LRVLG|MAJOR capsid protein|Leishmania RNA virus 1 -

Query: 4 LRHNPL 9
+RHNPL
Sbjct: 480 MRHNPL 485


>sp|MCP_ELHVK|MAJOR capsid protein|Elephantid herpesvirus 1 (isolate Asian

Query: 4 LRHNPLD 10
+ HNPLD
Sbjct: 386 MTHNPLD 392


>sp|NCAP_OLVVA|NUCLEOPROTEIN mammarenavirus (isolate Mouse/Argentina/RIID 3229/1990)

Query: 1 GGQLRHNPL 9
GG +R NPL
Sbjct: 348 GGNIRLNPL 356


>sp|RDRP_MCMVK|RNA-DIRECTED RNA polymerase|Maize chlorotic mottle virus (isolate

Query: 4 LRHNPL 9
L+HNPL
Sbjct: 957 LKHNPL 962


>sp|NCAP_RINDL|NUCLEOPROTEIN virus (strain L) (RDV)

Query: 1 GGQLRHN 7
GG+++HN
Sbjct: 425 GGEIQHN 431




15|Sequence|71|80|HNPLDIQMLS

>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain

Query: 2 NPLDIQMLS 10
NPLDI +LS
Sbjct: 351 NPLDISLLS 359


>sp|VG06_BPML5|MINOR tail protein Gp6|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 NPLDIQML 9
NPLD++ML
Sbjct: 6 NPLDLEML 13


>sp|VG06_BPMD2|MINOR tail protein Gp6|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 NPLDIQML 9
NP D++ML
Sbjct: 6 NPFDLEML 13


>sp|EXO2_BPR69|EXONUCLEASE subunit 2|Escherichia phage RB69 (Bacteriophage RB69)

Query: 2 NPLDIQM 8
NP+DIQ+
Sbjct: 20 NPIDIQL 26




16|Sequence|76|85|IQMLSRGLHE

>sp|Y48K_ELV|UNCHARACTERIZED 48 kDa protein|Erysimum latent virus (ELV)

Query: 4 LSRGLHE 10
LSRGLHE
Sbjct: 92 LSRGLHE 98


>sp|NCAP_I63A2|NUCLEOPROTEIN A virus (strain A/Equine/Miami/1/1963

Query: 1 IQMLSRGLHE 10
IQM+ RG+++
Sbjct: 194 IQMIKRGIND 203




17|Sequence|81|90|RGLHEQIFGQ

>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A

Query: 3 LHEQIFG 9
LHE+IFG
Sbjct: 244 LHEKIFG 250


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 3 LHEQIFGQ 10
LHEQ FG+
Sbjct: 215 LHEQRFGK 222


>sp|VF226_ASFM2|LATE protein I226R|African swine fever virus (isolate

Query: 1 RGLHEQI 7
+GLH+QI
Sbjct: 15 KGLHQQI 21




18|Sequence|86|95|QIFGQGGEMP

>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 4 GQGGEMP 10
GQ GEMP
Sbjct: 6438 GQAGEMP 6444


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 4 GQGGEMP 10
GQ GEMP
Sbjct: 6438 GQAGEMP 6444


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 4 GQGGEMP 10
GQ GEMP
Sbjct: 6438 GQAGEMP 6444


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 4 GQGGEMP 10
GQ GEMP
Sbjct: 6438 GQAGEMP 6444


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 4 GQGGEMP 10
GQ GEMP
Sbjct: 6438 GQAGEMP 6444


>sp|EXLYS_BPDPK|PEPTIDOGLYCAN hydrolase gp181|Pseudomonas phage phiKZ

Query: 1 QIFGQGGEM 9
Q++GQ G+M
Sbjct: 803 QLYGQAGDM 811


>sp|YR449_MIMIV|UNCHARACTERIZED protein R449|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 QIFGQGG 7
++FGQGG
Sbjct: 335 KLFGQGG 341


>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 IFGQGGEMP 10
++G+ GE+P
Sbjct: 320 VYGERGELP 328


>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 IFGQGGEMP 10
++G+ GE+P
Sbjct: 320 VYGERGELP 328


>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)

Query: 1 QIFGQGGEMP 10
Q++G+G +P
Sbjct: 178 QVYGKGRRLP 187


>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P

Query: 4 GQGGEMP 10
G GGE+P
Sbjct: 376 GTGGELP 382




19|Sequence|91|100|GGEMPGEAAV

>sp|GB_SHV1|ENVELOPE glycoprotein B|Saimiriine herpesvirus 1 (strain MV-5-4-PSL)

Query: 1 GGEMPGEAA 9
G E+PGE A
Sbjct: 62 GAELPGEDA 70




20|Sequence|96|105|GEAAVRRSVE

***** No hits found ******


21|Sequence|101|110|RRSVEHLQKH

>sp|VP03_SHV21|PROBABLE membrane antigen 3|Saimiriine herpesvirus 2 (strain 11)

Query: 1 RRSVEHLQK 9
+R + HLQK
Sbjct: 140 KRHIRHLQK 148


>sp|RPOL_BPKMV|DNA-DIRECTED RNA polymerase|Pseudomonas phage phiKMV

Query: 2 RSVEHLQK 9
RSV H+QK
Sbjct: 144 RSVRHIQK 151




22|Sequence|106|115|HLQKHGLWGQ

>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 1 HLQKHGLWGQ 10
H++ HG +GQ
Sbjct: 853 HMETHGAFGQ 862


>sp|IAP_ASFWA|INHIBITOR of apoptosis protein|African swine fever virus (isolate

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|IAP_ASFP5|INHIBITOR of apoptosis protein|African swine fever virus (isolate

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|IAP_ASFP4|INHIBITOR of apoptosis protein|African swine fever virus (isolate

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|IAP_ASFM2|INHIBITOR of apoptosis protein|African swine fever virus (isolate

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|IAP_ASFL6|IAP-LIKE protein p27|African swine fever virus (isolate

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|IAP_ASFK5|INHIBITOR of apoptosis protein|African swine fever virus (isolate

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|IAP_ASFH8|INHIBITOR of apoptosis protein|African swine fever virus (isolate

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|IAP_ASFE7|IAP-LIKE protein p27|African swine fever virus (isolate

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|IAP_ASFE1|INHIBITOR of apoptosis protein|African swine fever virus (strain

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|IAP_ASFB7|INHIBITOR of apoptosis protein|African swine fever virus (strain

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|IAPL_ASFCH|INHIBITOR of apoptosis protein|African swine fever virus (isolate

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|IAPL_ASFC3|IAP-LIKE protein p27|African swine fever virus (isolate

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|IAPL_ASFC1|IAP-LIKE protein p27|African swine fever virus (isolate

Query: 2 LQKHGLWGQ 10
LQ HG W +
Sbjct: 79 LQVHGFWSR 87


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 4 KHGLWG 9
K+GLWG
Sbjct: 2399 KYGLWG 2404


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 4 KHGLWG 9
K+GLWG
Sbjct: 2399 KYGLWG 2404


>sp|GPF_BPMU|PUTATIVE capsid assembly protein F|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 LQKHGLWGQ 10
LQK G WG+
Sbjct: 85 LQKLGWWGK 93


>sp|YR738_MIMIV|PUTATIVE BTB/POZ domain-containing protein R738|Acanthamoeba polyphaga

Query: 2 LQKHGL 7
LQKHGL
Sbjct: 3 LQKHGL 8


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 3 QKHGLWGQ 10
QK G WG+
Sbjct: 1617 QKRGKWGE 1624


>sp|3608L_ASFP4|PROTEIN MGF 360-8L|African swine fever virus (isolate

Query: 2 LQKHGLW 8
LQ+ GLW
Sbjct: 25 LQRFGLW 31


>sp|36014_ASFWA|PROTEIN MGF 360-14L|African swine fever virus (isolate

Query: 2 LQKHGLW 8
LQ+ GLW
Sbjct: 25 LQRFGLW 31


>sp|36014_ASFP4|PROTEIN MGF 360-14L|African swine fever virus (isolate

Query: 2 LQKHGLW 8
LQ+ GLW
Sbjct: 25 LQRFGLW 31


>sp|36014_ASFM2|PROTEIN MGF 360-14L|African swine fever virus (isolate

Query: 2 LQKHGLW 8
LQ+ GLW
Sbjct: 25 LQRFGLW 31


>sp|36014_ASFK5|PROTEIN MGF 360-14L|African swine fever virus (isolate

Query: 2 LQKHGLW 8
LQ+ GLW
Sbjct: 25 LQRFGLW 31


>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)

Query: 2 LQKHGLWG 9
LQKHG G
Sbjct: 761 LQKHGFKG 768


>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)

Query: 1 HLQKHGLW 8
++Q+HGL+
Sbjct: 372 YIQRHGLY 379


>sp|YO02_BPHC1|UNCHARACTERIZED 7.9 kDa protein in|Haemophilus phage HP1 (strain HP1c1)

Query: 2 LQKHGLW 8
LQK+G W
Sbjct: 39 LQKYGFW 45


>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 5 HGLWGQ 10
HG WG+
Sbjct: 173 HGYWGK 178


>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 5 HGLWGQ 10
HG WG+
Sbjct: 173 HGYWGK 178


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 4 KHGLWG 9
++GLWG
Sbjct: 2408 RYGLWG 2413


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 4 KHGLWG 9
++GLWG
Sbjct: 2399 RYGLWG 2404


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 4 KHGLWG 9
++GLWG
Sbjct: 2489 RYGLWG 2494


>sp|L_SHRV|RNA-DIRECTED RNA polymerase L|Snakehead rhabdovirus (SHRV)

Query: 4 KHGLW 8
KHG+W
Sbjct: 1915 KHGVW 1919


>sp|GAM_LAMBD|HOST-NUCLEASE inhibitor protein gam|Escherichia phage lambda (Bacteriophage

Query: 1 HLQKHG 6
HLQ+HG
Sbjct: 91 HLQRHG 96




23|Sequence|111|120|GLWGQPAVPL

>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra

Query: 1 GLWGQPAVPL 10
GL+ QP VP+
Sbjct: 478 GLYKQPGVPV 487


>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)

Query: 1 GLWGQPAVPL 10
GL+ QP VP+
Sbjct: 477 GLYKQPGVPV 486


>sp|CAPSD_BPHK7|MAJOR capsid protein|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 2 LWGQPAVP 9
+WG P VP
Sbjct: 308 MWGLPVVP 315


>sp|UL110_HCMVA|UNCHARACTERIZED protein UL110|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GLWGQPAVPL 10
G WG P +P+
Sbjct: 47 GFWGSPPLPI 56


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1 GLWGQPAVPL 10
GL+ +P+VP+
Sbjct: 1066 GLFSRPSVPM 1075


>sp|MVP_SCPMV|MOVEMENT protein P1|Southern cowpea mosaic virus (SCPMV)

Query: 1 GLWGQPAVPL 10
GLW QP P+
Sbjct: 138 GLWWQPVKPV 147


>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 2 LWGQPAVPL 10
+WG PAV +
Sbjct: 354 IWGHPAVDI 362


>sp|DPOL_BPPRD|DNA-DIRECTED DNA polymerase|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 2 LWGQPA 7
LWG+PA
Sbjct: 387 LWGRPA 392


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 GLWGQPAVPL 10
GL+ P VPL
Sbjct: 1066 GLFSAPTVPL 1075


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 GLWGQPAVPL 10
GL+ P VPL
Sbjct: 1066 GLFSAPTVPL 1075


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 GLWGQPAVPL 10
GL+ P VPL
Sbjct: 1066 GLFSAPTVPL 1075


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 GLWGQPAVPL 10
GL+ P VPL
Sbjct: 1066 GLFSAPTVPL 1075


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 1 GLWGQPAVPL 10
GL+ P VPL
Sbjct: 1066 GLFSAPTVPL 1075


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 GLWGQPAVPL 10
GL+ P VPL
Sbjct: 1064 GLFSAPTVPL 1073


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 GLWGQPAVPL 10
GL+ P VPL
Sbjct: 1064 GLFSAPTVPL 1073


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 GLWGQPAVPL 10
GL+ P VPL
Sbjct: 1064 GLFSAPTVPL 1073


>sp|IKBN3_MDBVW|I-KAPPA-B like protein N3|Microplitis demolitor bracovirus (isolate Webb)

Query: 2 LWGQPAVPL 10
LW QP++ L
Sbjct: 120 LWKQPSINL 128


>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 3 WGQPAV 8
WGQP +
Sbjct: 1090 WGQPVI 1095


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2 LWGQPAV 8
WG+PAV
Sbjct: 1114 FWGEPAV 1120


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2 LWGQPAV 8
WG+PAV
Sbjct: 1114 FWGEPAV 1120


>sp|VP03_SHV21|PROBABLE membrane antigen 3|Saimiriine herpesvirus 2 (strain 11)

Query: 2 LWGQPAVPL 10
LW P VPL
Sbjct: 1195 LWQWPYVPL 1203


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2 LWGQPAV 8
WG+PAV
Sbjct: 1114 FWGEPAV 1120


>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2 LWGQPAV 8
WG+PAV
Sbjct: 1114 FWGEPAV 1120


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2 LWGQPAV 8
WG+PAV
Sbjct: 1114 FWGEPAV 1120


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 2 LWGQPAV 8
WG+PAV
Sbjct: 1112 FWGEPAV 1118


>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 1 GLWGQP 6
GLWG P
Sbjct: 345 GLWGDP 350


>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)

Query: 2 LWGQPAVPL 10
+WG P + L
Sbjct: 367 IWGHPIIDL 375


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 GLWGQPAVPL 10
GL+ +PA PL
Sbjct: 48 GLFYRPATPL 57


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 3 WGQPAVP 9
WGQP P
Sbjct: 76 WGQPGYP 82


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 3 WGQPAVP 9
WGQP P
Sbjct: 76 WGQPGYP 82


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 3 WGQPAVP 9
WGQP P
Sbjct: 76 WGQPGYP 82


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 3 WGQPAVP 9
WGQP P
Sbjct: 76 WGQPGYP 82


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 2 LWGQPAVPL 10
LW Q +PL
Sbjct: 760 LWAQLCIPL 768




24|Sequence|116|125|PAVPLPDVEL

>sp|PTELO_BPKO2|PROTELOMERASE oxytoca phage phiKO2 (Bacteriophage

Query: 1 PAVPLPDVEL 10
PA+ LPD E+
Sbjct: 529 PAIVLPDEEI 538


>sp|VG64_BPML5|GENE 64 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 PAVPLPDVEL 10
P LPD+EL
Sbjct: 118 PQAILPDIEL 127


>sp|RPB3_ASFWA|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (isolate

Query: 1 PAVPLPDV 8
PAVPLP +
Sbjct: 224 PAVPLPHI 231


>sp|RPB3_ASFP4|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (isolate

Query: 1 PAVPLPDV 8
PAVPLP +
Sbjct: 224 PAVPLPHI 231


>sp|RPB3_ASFB7|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (strain

Query: 1 PAVPLPDV 8
PAVPLP +
Sbjct: 224 PAVPLPHI 231


>sp|PTELO_BPN15|PROTELOMERASE phage N15 (Bacteriophage N15)

Query: 1 PAVPLPDVE 9
PA+ LPD E
Sbjct: 529 PAIVLPDEE 537


>sp|RPB3_ASFK5|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (isolate

Query: 1 PAVPLPDV 8
PAVPLP +
Sbjct: 224 PAVPLPRI 231


>sp|VIE2_NPVCF|E3 ubiquitin-protein ligase IE2|Choristoneura fumiferana nuclear

Query: 2 AVPLPDVEL 10
AVPLP V++
Sbjct: 167 AVPLPQVDM 175


>sp|DPOL_MUHVS|DNA polymerase catalytic subunit|Murid herpesvirus 1 (strain Smith)

Query: 1 PAVPLPDVEL 10
P P+PDV++
Sbjct: 351 PCAPIPDVKI 360


>sp|RPB3_ASFM2|DNA-DIRECTED RNA polymerase RPB3-11 homolog|African swine fever virus (isolate

Query: 1 PAVPLPDV 8
PAVP+P +
Sbjct: 224 PAVPMPRI 231


>sp|NSP12_RGDV|NON-STRUCTURAL protein 9|Rice gall dwarf virus (RGDV)

Query: 1 PAVPLPDVE 9
P +PL DVE
Sbjct: 313 PYIPLRDVE 321




25|Sequence|121|130|PDVELRLPPL

>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P

Query: 1 PDVELRLPP 9
PDV+ R PP
Sbjct: 769 PDVDRRAPP 777


>sp|LYS_BPB30|D-ALANYL-L-ALANINE endopeptidase|Streptococcus phage B30 (Streptococcus agalactiae

Query: 1 PDVELRLPPL 10
PD E+R PL
Sbjct: 303 PDYEVRTEPL 312


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 3 VELRLPP 9
VEL+LPP
Sbjct: 653 VELQLPP 659


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 3 VELRLPP 9
VEL+LPP
Sbjct: 653 VELQLPP 659


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 1 PDVELRLP 8
PD+E R P
Sbjct: 712 PDLEFRFP 719


>sp|POL2_GCMV|RNA2 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 2 DVELRLPP 9
D+E+ LPP
Sbjct: 994 DIEIMLPP 1001


>sp|RDRP_REOVJ|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 2 (strain D5/Jones)

Query: 1 PDVELRLP 8
P V+LRLP
Sbjct: 1069 PSVDLRLP 1076


>sp|RDRP_REOVD|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 3 (strain Dearing)

Query: 1 PDVELRLP 8
P V+LRLP
Sbjct: 1069 PSVDLRLP 1076


>sp|RDRP_REOVL|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 1 (strain Lang)

Query: 1 PDVELRLP 8
P V+LRLP
Sbjct: 1069 PSVDLRLP 1076


>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 2 DVELRLPPL 10
D+EL PPL
Sbjct: 106 DIELVYPPL 114


>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)

Query: 1 PDVELRL 7
PDV+LRL
Sbjct: 174 PDVQLRL 180


>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)

Query: 1 PDVELRL 7
PDV+LRL
Sbjct: 174 PDVQLRL 180


>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1

Query: 1 PDVELRLPP 9
PD+E LPP
Sbjct: 205 PDIEALLPP 213




26|Sequence|126|135|RLPPLYGDNL

>sp|ENV_FFV|ENVELOPE glycoprotein gp130|Feline foamy virus (FFV) (Feline

Query: 2 LPPLYGDNL 10
LPP +G+NL
Sbjct: 254 LPPRFGNNL 262


>sp|VG43_ICHVA|UNCHARACTERIZED protein ORF43|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 PPLYGDNL 10
PP+YG++L
Sbjct: 824 PPVYGEDL 831


>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 2 LPPLYGDNL 10
+P +YGDN
Sbjct: 11 MPLIYGDNF 19


>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 2 LPPLYGDNL 10
+P +YGDN
Sbjct: 11 MPLIYGDNF 19


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 2 LPPLYGDNL 10
+P +YGDN
Sbjct: 11 MPLIYGDNF 19


>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 2 LPPLYGDNL 10
+P +YGDN
Sbjct: 11 MPLIYGDNF 19


>sp|PRIM_BPP4|PUTATIVE P4-specific DNA primase|Enterobacteria phage P4 (Bacteriophage P4)

Query: 2 LPPLYGD 8
LPP++GD
Sbjct: 284 LPPVFGD 290


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2 LPPLYGDN 9
LPPL G N
Sbjct: 507 LPPLVGSN 514


>sp|RIR2_BHV1C|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Bovine herpesvirus 1.1 (strain Cooper)

Query: 1 RLPPLYG 7
+LPPL+G
Sbjct: 271 QLPPLFG 277


>sp|US04_HCMVA|UNCHARACTERIZED protein US4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 RLPPLYGD 8
R PPL+GD
Sbjct: 77 RPPPLHGD 84


>sp|P0_PEMVW|SUPPRESSOR of silencing P0|Pea enation mosaic virus-1 (strain

Query: 1 RLPPLYGDNL 10
++PPLYG L
Sbjct: 225 QIPPLYGSVL 234


>sp|TSP_BPMU|TAIL sheath protein|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 RLPPLYGD 8
R+PP GD
Sbjct: 331 RMPPAVGD 338


>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 PPLYGDNL 10
PP++GD L
Sbjct: 87 PPVFGDFL 94


>sp|Y033_OSHVF|UNCHARACTERIZED protein ORF33|Ostreid herpesvirus 1 (isolate France)

Query: 1 RLPPLY 6
+LPPLY
Sbjct: 39 KLPPLY 44


>sp|PPIL_MIMIV|STRUCTURAL PPIase-like protein L605|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LPPLYGD 8
+PP++GD
Sbjct: 112 IPPVFGD 118




27|Sequence|131|140|YGDNLDQHFR

>sp|GH_MEHV1|ENVELOPE glycoprotein H|Meleagrid herpesvirus 1 (MeHV-1) (Turkey

Query: 2 GDNLDQHF 9
GD++D HF
Sbjct: 289 GDSMDYHF 296


>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 GDNLDQHFR 10
G+NLD++ R
Sbjct: 194 GNNLDEYIR 202


>sp|L_AMPV1|RNA-DIRECTED RNA polymerase L|Avian metapneumovirus (isolate Canada

Query: 3 DNLDQHF 9
D+LD HF
Sbjct: 1722 DDLDHHF 1728


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 GDNLDQHF 9
GD LDQ F
Sbjct: 4432 GDKLDQFF 4439


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 GDNLDQHF 9
GD LDQ F
Sbjct: 4432 GDKLDQFF 4439


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 2 GDNLDQHF 9
GD LDQ F
Sbjct: 4432 GDKLDQFF 4439


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 2 GDNLDQHF 9
GD LDQ F
Sbjct: 4432 GDKLDQFF 4439


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2 GDNLDQHF 9
GD LDQ F
Sbjct: 4432 GDKLDQFF 4439


>sp|UL04_HCMVT|EARLY glycoprotein GP48|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 GDNLDQHFR 10
GD+ +QH+R
Sbjct: 91 GDSNEQHYR 99


>sp|V026_FOWPN|PUTATIVE ankyrin repeat protein FPV026|Fowlpox virus (strain NVSL) (FPV)

Query: 1 YGDNLDQHFR 10
YGD +DQ+ +
Sbjct: 383 YGDIIDQYIK 392


>sp|APYC1_BPSBS|ANTI-PYCSAR protein Apyc1|Bacillus phage SBSphiJ

Query: 1 YGDNLDQHF 9
YGDNL+ F
Sbjct: 232 YGDNLEDFF 240


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 1 YGDNLDQHF 9
Y N+D H+
Sbjct: 1325 YAGNIDNHY 1333


>sp|REP_AHEBV|REPLICATION-ASSOCIATED protein|Avon-Heathcote Estuary associated kieseladnavirus (AHEaBV)

Query: 1 YGDNLD 6
+GDNLD
Sbjct: 427 FGDNLD 432


>sp|NSP12_RDVA|NON-STRUCTURAL protein 12A|Rice dwarf virus (isolate Akita)

Query: 2 GDNLDQHFR 10
GD ++QH++
Sbjct: 160 GDGVEQHYK 168




28|Sequence|136|145|DQHFRLLAQK

>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 1 DQHFRLLAQK 10
DQH R +AQ+
Sbjct: 867 DQHTRDIAQR 876


>sp|YL492_MIMIV|UNCHARACTERIZED protein L492|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 HFRLLAQK 10
HFR+L Q+
Sbjct: 63 HFRILEQR 70




29|Sequence|141|150|LLAQKQSLPY

>sp|VNS2_EHDV2|NON-STRUCTURAL protein NS2|Epizootic hemorrhagic disease virus 2

Query: 2 LAQKQSLPY 10
+A +QSLPY
Sbjct: 26 IAARQSLPY 34




30|Sequence|146|155|QSLPYLEAAN

>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 2 SLPYLEAAN 10
S+PYL AA+
Sbjct: 661 SIPYLSAAD 669


>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)

Query: 2 SLPYLEAAN 10
++PY+EA+N
Sbjct: 454 AVPYIEASN 462


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 2 SLPYLEAAN 10
S+PYL AA+
Sbjct: 662 SIPYLSAAD 670


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 SLPYLEAAN 10
S+PYL AA+
Sbjct: 662 SIPYLSAAD 670


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 2 SLPYLEAAN 10
++PY+EA+N
Sbjct: 454 AVPYIEASN 462


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2 SLPYLEAAN 10
++PY+EA+N
Sbjct: 454 AVPYIEASN 462


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 2 SLPYLEAAN 10
++PY+EA+N
Sbjct: 454 AVPYIEASN 462


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2 SLPYLEAAN 10
++PY+EA+N
Sbjct: 454 AVPYIEASN 462


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 2 SLPYLEAAN 10
++PY+EA+N
Sbjct: 452 AVPYIEASN 460




31|Sequence|151|160|LEAANLLLQA

>sp|SPIKE_BCRP3|SPIKE glycoprotein|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 LEAANLLLQ 9
LE +NLLLQ
Sbjct: 715 LECSNLLLQ 723


>sp|SPIKE_BCHK3|SPIKE glycoprotein|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 LEAANLLLQ 9
LE +NLLLQ
Sbjct: 716 LECSNLLLQ 724


>sp|SPIKE_BC279|SPIKE glycoprotein|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 LEAANLLLQ 9
LE +NLLLQ
Sbjct: 715 LECSNLLLQ 723


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2 EAANLLLQ 9
E ANLLLQ
Sbjct: 730 ECANLLLQ 737




32|Sequence|156|165|LLLQAQLPPK

>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 2 LLQAQLPP 9
LLQ+ LPP
Sbjct: 246 LLQSSLPP 253


>sp|P3_RGDV|OUTER capsid protein P3|Rice gall dwarf virus (RGDV)

Query: 1 LLLQAQLPP 9
LLLQA PP
Sbjct: 392 LLLQAITPP 400


>sp|CAPSD_ASPVP|CAPSID protein|Apple stem pitting virus (isolate

Query: 1 LLLQAQLPP 9
L+LQ Q PP
Sbjct: 319 LMLQTQSPP 327




33|Sequence|161|170|QLPPKPPAWA

>sp|HELI1_SFAVA|PUTATIVE ATP-dependent RNA helicase|Spodoptera frugiperda ascovirus 1a

Query: 1 QLPPKPPAW 9
Q PP PPA+
Sbjct: 621 QTPPVPPAY 629


>sp|POLR_NORAV|REPLICATION polyprotein|Nora virus

Query: 4 PKPPAW 9
P+PP W
Sbjct: 1188 PRPPQW 1193


>sp|PORTL_LAMBD|PORTAL protein B|Escherichia phage lambda (Bacteriophage lambda)

Query: 5 KPPAWA 10
KPPAWA
Sbjct: 506 KPPAWA 511


>sp|VP87_NPVOP|CAPSID protein p87|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 QLPPKPPAWA 10
Q+PP+ PA+A
Sbjct: 273 QMPPQTPAYA 282


>sp|MVP_CERV|MOVEMENT protein|Carnation etched ring virus (CERV)

Query: 1 QLPPKPPAWA 10
+L P+P +WA
Sbjct: 253 ELDPEPNSWA 262


>sp|P19_TBSVT|RNA silencing suppressor p19|Tomato bushy stunt virus (strain

Query: 1 QLPPKPPAW 9
QLP + P+W
Sbjct: 31 QLPDESPSW 39


>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)

Query: 3 PPKPPAW 9
PP PP W
Sbjct: 598 PPAPPGW 604


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 3 PPKPPAWA 10
PP PPA A
Sbjct: 183 PPTPPATA 190


>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 2 LPPKPPAWA 10
L P P AWA
Sbjct: 733 LAPSPDAWA 741


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 2 LPPKPPAWA 10
L P P AWA
Sbjct: 733 LAPSPDAWA 741


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 2 LPPKPPAWA 10
L P P AWA
Sbjct: 733 LAPSPDAWA 741


>sp|P19_TBSVA|RNA silencing suppressor p19|Tomato bushy stunt virus (strain

Query: 1 QLPPKPPAW 9
QLP + P+W
Sbjct: 31 QLPDESPSW 39


>sp|ICP46_IIV3|IMMEDIATE-EARLY protein ICP-46 homolog|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 PPKPP 7
PPKPP
Sbjct: 214 PPKPP 218


>sp|VG65_BPML5|GENE 65 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 4 PKPPAWA 10
P PP WA
Sbjct: 17 PLPPVWA 23


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 QLPPKPPAWA 10
Q PP P WA
Sbjct: 2280 QFPPAMPIWA 2289


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LPPKPPA 8
+PP PP+
Sbjct: 1951 MPPNPPS 1957


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LPPKPPA 8
+PP PP+
Sbjct: 1951 IPPNPPS 1957


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LPPKPPA 8
+PP PP+
Sbjct: 1951 IPPNPPS 1957


>sp|P19_TBSV8|RNA silencing suppressor p19|Tomato bushy stunt virus (strain

Query: 1 QLPPKPPAW 9
QLP + P+W
Sbjct: 31 QLPDESPSW 39


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 LPPKPPA 8
+PP PP+
Sbjct: 1951 IPPNPPS 1957


>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37

Query: 2 LPPKPP 7
LPP PP
Sbjct: 13 LPPTPP 18


>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15

Query: 2 LPPKPP 7
LPP PP
Sbjct: 13 LPPTPP 18


>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38

Query: 2 LPPKPP 7
LPP PP
Sbjct: 13 LPPTPP 18


>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22

Query: 2 LPPKPP 7
LPP PP
Sbjct: 13 LPPTPP 18


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 QLPPKPPAWA 10
+ PP PAWA
Sbjct: 2280 RFPPALPAWA 2289


>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17

Query: 2 LPPKPP 7
LPP PP
Sbjct: 13 LPPTPP 18


>sp|POLG_PVCV2|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 2 LPPKPPAWA 10
L KPPAW
Sbjct: 1648 LKKKPPAWG 1656


>sp|POLG_PVCV1|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 2 LPPKPPAWA 10
L KPPAW
Sbjct: 1647 LKKKPPAWG 1655


>sp|OE56_NPVHZ|OCCLUSION-DERIVED virus envelope protein E56|Heliothis zea nuclear polyhedrosis virus

Query: 3 PPKPPA 8
PP PPA
Sbjct: 166 PPPPPA 171


>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23

Query: 2 LPPKPP 7
LPP PP
Sbjct: 13 LPPTPP 18


>sp|SPAN2_BP933|SPANIN, outer membrane subunit|Escherichia phage 933W (Bacteriophage

Query: 3 PPKPPAW 9
PP PPAW
Sbjct: 33 PPAPPAW 39




34|Sequence|166|175|PPAWAWAEGW

>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 PAWAWAEGW 10
P W W E W
Sbjct: 1733 PKWQWQEAW 1741


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 PAWAWAEGW 10
P W W E W
Sbjct: 1733 PKWQWQEAW 1741


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 4 WAWAEGW 10
W W E W
Sbjct: 1682 WQWQEAW 1688


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 4 WAWAEGW 10
W W E W
Sbjct: 1726 WQWQEAW 1732


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 4 WAWAEGW 10
W W E W
Sbjct: 1746 WQWQEAW 1752


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 4 WAWAEGW 10
W W E W
Sbjct: 1776 WQWQEAW 1782


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 4 WAWAEGW 10
W W E W
Sbjct: 1682 WQWQEAW 1688


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4 WAWAEGW 10
W W E W
Sbjct: 1726 WQWQEAW 1732


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4 WAWAEGW 10
W W E W
Sbjct: 1746 WQWQEAW 1752


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4 WAWAEGW 10
W W E W
Sbjct: 1776 WQWQEAW 1782


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 PPAWAW 6
PP W W
Sbjct: 5916 PPNWVW 5921


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 PPAWAW 6
PP W W
Sbjct: 6040 PPNWVW 6045


>sp|Y330_ATV|PUTATIVE acetyltransferase ORF330|Acidianus two-tailed virus (ATV)

Query: 1 PPAWAWAEGW 10
PP W A GW
Sbjct: 195 PPFWLSAYGW 204


>sp|VF113_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 2 PAWAWAEGW 10
P W ++E W
Sbjct: 786 PVWTYSELW 794


>sp|ETFS_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 2 PAWAWAEGW 10
P W ++E W
Sbjct: 786 PVWTYSELW 794


>sp|ETFS_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 2 PAWAWAEGW 10
P W ++E W
Sbjct: 751 PVWTYSELW 759


>sp|ETFS_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 2 PAWAWAEGW 10
P W ++E W
Sbjct: 787 PVWTYSELW 795


>sp|ETFS_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 2 PAWAWAEGW 10
P W ++E W
Sbjct: 786 PVWTYSELW 794


>sp|P4_RTBVP|PROTEIN P4|Rice tungro bacilliform virus (isolate

Query: 3 AWAWAE 8
AWAW E
Sbjct: 361 AWAWPE 366


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 1 PPAWAWA 7
PP W W
Sbjct: 334 PPNWTWG 340


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 2 PAWAWAEG 9
P W W G
Sbjct: 1195 PTWCWGVG 1202


>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain

Query: 4 WAWAEG 9
+AWAEG
Sbjct: 446 YAWAEG 451


>sp|GP_HAZVJ|ENVELOPMENT polyprotein|Hazara virus (isolate JC280)

Query: 2 PAWAWAEG 9
P W W G
Sbjct: 931 PTWCWGVG 938


>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 1 PPAWAW 6
PP W W
Sbjct: 601 PPGWVW 606


>sp|NRAM_I72A5|NEURAMINIDASE A virus (strain A/Shearwater/Australia/1972

Query: 2 PAWAWAEG 9
P W+W +G
Sbjct: 451 PGWSWDDG 458


>sp|PK_BPT7|PROTEIN kinase 0.7|Escherichia phage T7 (Bacteriophage T7)

Query: 3 AWAWAE 8
AW WAE
Sbjct: 286 AWRWAE 291


>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)

Query: 1 PPAWAW 6
PP W W
Sbjct: 602 PPGWIW 607


>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)

Query: 1 PPAWAW 6
PP W W
Sbjct: 601 PPGWIW 606


>sp|SPIKE_BEV|SPIKE glycoprotein|Berne virus (BEV)

Query: 5 AWAEGW 10
+WA GW
Sbjct: 1528 SWASGW 1533


>sp|GD_SUHVR|ENVELOPE glycoprotein D|Suid herpesvirus 1 (strain Rice)

Query: 1 PPAWAWAEGW 10
PPA+ + E W
Sbjct: 30 PPAYPYTESW 39


>sp|DPOL2_BPKIM|DEPOLYMERASE 1, capsule K47-specific|Klebsiella phage vB_KpnP_IME205

Query: 2 PAWAWAEG 9
P W W +G
Sbjct: 391 PYWCWNDG 398


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 3 AWAWAEG 9
AW WAE
Sbjct: 1977 AWHWAEA 1983


>sp|VF229_IIV3|UNCHARACTERIZED protein 229L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 PAWAWAEGW 10
P AW GW
Sbjct: 363 PNGAWVLGW 371


>sp|VG23_BPML5|MAJOR tail protein Gp23|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 PPAWAWAEGW 10
P W A GW
Sbjct: 39 PETWTGATGW 48


>sp|SPIKE_BRV1|SPIKE glycoprotein|Breda virus 1 (BRV-1)

Query: 6 WAEGW 10
WA GW
Sbjct: 1531 WASGW 1535


>sp|TIPJ_BPSE4|TIP attachment protein J|Escherichia phage SECphi4

Query: 2 PAWAW 6
PAW W
Sbjct: 285 PAWHW 289


>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 4 WAWAEGW 10
WA+ GW
Sbjct: 414 WAFIHGW 420


>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)

Query: 2 PAWAWA 7
P WAW
Sbjct: 275 PLWAWG 280


>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 PAWAWA 7
P WAW
Sbjct: 275 PLWAWG 280




35|Sequence|171|180|WAEGWTRYGP

>sp|VP3_EHDVA|CORE protein VP3|Epizootic hemorrhagic disease virus 2

Query: 3 EGWTRYG 9
EGW R+G
Sbjct: 767 EGWVRFG 773


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 2 AEGWTRYG 9
AE WTRYG
Sbjct: 2080 AEVWTRYG 2087


>sp|NSP4_ROTF6|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate

Query: 1 WAEGWTRYGP 10
WAEG Y P
Sbjct: 159 WAEGENPYKP 168


>sp|DPOL_BPSPB|DNA-DIRECTED DNA polymerase|Bacillus phage SPbeta (Bacillus phage

Query: 1 WAEGWTRYG 9
W E TRYG
Sbjct: 743 WYEEMTRYG 751


>sp|YL033_MIMIV|PUTATIVE KilA-N domain-containing protein L33|Acanthamoeba polyphaga

Query: 1 WAEGWTRY 8
W E W RY
Sbjct: 125 WIEEWRRY 132


>sp|ENLYS_BPDPK|ENDOLYSIN gp144|Pseudomonas phage phiKZ

Query: 1 WAEGWTRYGP 10
WAE +++Y P
Sbjct: 62 WAELFSKYSP 71


>sp|NSP4_ROTH3|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain

Query: 1 WAEGWTRYGP 10
WAEG Y P
Sbjct: 159 WAEGENPYEP 168


>sp|NSP4_ROTCU|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate RVA/Dog/United

Query: 1 WAEGWTRYGP 10
WAEG Y P
Sbjct: 159 WAEGENPYEP 168


>sp|NCAP_SBVBH|NUCLEOPROTEIN Schmallenberg virus (isolate Bovine/BH80/Germany/2011)

Query: 1 WAEGWTRY 8
WA+G+T Y
Sbjct: 134 WADGYTMY 141


>sp|FIBER_LAMBD|TAIL fiber protein|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 AEGWTRYG 9
+ GW++YG
Sbjct: 667 SSGWSQYG 674


>sp|SCAF_ALHV1|CAPSID scaffolding protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 AEGWTRYGP 10
A+ W+RY P
Sbjct: 28 AQTWSRYLP 36


>sp|RDRP_BPQBE|RNA-DIRECTED RNA polymerase subunit beta|Escherichia virus Qbeta (Bacteriophage

Query: 4 GWTRYGP 10
GW RY P
Sbjct: 486 GWIRYVP 492


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 WAEGWTRYG 9
W EG T YG
Sbjct: 4166 WHEGRTIYG 4174


>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_IRKV|NUCLEOPROTEIN virus (IRKV)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_EBLV1|NUCLEOPROTEIN bat lyssavirus 1 (strain

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 3 EGWTRYG 9
E WT YG
Sbjct: 87 EDWTSYG 93


>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)

Query: 1 WAEGWT 6
W E WT
Sbjct: 1256 WQEAWT 1261


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 2 AEGWTRYG 9
AE WT+YG
Sbjct: 2076 AEVWTKYG 2083


>sp|ORF1_TOTV|UNCHARACTERIZED protein ORF1|Tomato torrado virus (isolate Solanum

Query: 4 GWTRYGP 10
GWT GP
Sbjct: 180 GWTEEGP 186


>sp|RDRP_CARMV|RNA-DIRECTED RNA polymerase|Carnation mottle virus (CarMV)

Query: 4 GWTRYG 9
GW+R+G
Sbjct: 587 GWSRFG 592


>sp|RDRP_CARMS|PROBABLE RNA-directed RNA polymerase|Carnation mottle virus (isolate

Query: 4 GWTRYG 9
GW+R+G
Sbjct: 587 GWSRFG 592


>sp|RDRP_TYYVF|PROTEIN P1-P2|Turnip yellows virus (isolate FL-1)

Query: 4 GWTRYGP 10
GW ++GP
Sbjct: 598 GWPKFGP 604


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 2 AEGWTRYG 9
AE WTR+G
Sbjct: 2080 AEVWTRHG 2087


>sp|CARG1_BPCA1|CARGO protein 1|Bacteroides phage crAss001 (Bacteroides phage

Query: 5 WTRYGP 10
WTRY P
Sbjct: 606 WTRYAP 611


>sp|SPIKE_BEV|SPIKE glycoprotein|Berne virus (BEV)

Query: 1 WAEGW 5
WA GW
Sbjct: 1529 WASGW 1533


>sp|SPIKE_BRV1|SPIKE glycoprotein|Breda virus 1 (BRV-1)

Query: 1 WAEGW 5
WA GW
Sbjct: 1531 WASGW 1535


>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3

Query: 2 AEGWTRYGP 10
AEG R+GP
Sbjct: 97 AEGTLRFGP 105


>sp|NCAP_AINOV|NUCLEOPROTEIN virus

Query: 1 WAEGWTRY 8
W EG T Y
Sbjct: 134 WTEGLTMY 141




36|Sequence|176|185|TRYGPEGEAV

>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 GPEGEAV 10
GPEGEA+
Sbjct: 420 GPEGEAI 426


>sp|YL264_MIMIV|UNCHARACTERIZED WD repeat-containing protein L264|Acanthamoeba polyphaga mimivirus

Query: 2 RYGPEGEAV 10
+YGP G A+
Sbjct: 1171 KYGPRGNAI 1179


>sp|ICP46_FRG3G|IMMEDIATE-EARLY protein ICP-46|Frog virus 3 (isolate Goorha)

Query: 4 GPEGEA 9
GPEGEA
Sbjct: 262 GPEGEA 267


>sp|P4_PCVC|UNCHARACTERIZED protein p4|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 1 TRYGPE 6
TRYGPE
Sbjct: 782 TRYGPE 787


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 1 TRYGPEGEAV 10
T GPEG A+
Sbjct: 656 TNEGPEGRAI 665


>sp|CAPSD_BTV13|INNER capsid protein VP3|Bluetongue virus 13 (isolate USA)

Query: 2 RYGPEGE 8
+YGP GE
Sbjct: 417 KYGPTGE 423


>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 GPEGEAV 10
GPEGE +
Sbjct: 420 GPEGEVI 426


>sp|UL32_EHV2|PACKAGING protein UL32 homolog|Equine herpesvirus 2 (strain 86/87)

Query: 3 YGPEG 7
YGPEG
Sbjct: 122 YGPEG 126


>sp|CAPSD_BPKPP|MAJOR capsid protein|Pseudomonas phage KPP10 (Bacteriophage KPP10)

Query: 2 RYGPEGEAV 10
RY P GEAV
Sbjct: 275 RYVPAGEAV 283


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 1 TRYGPEG 7
TRY PEG
Sbjct: 258 TRYTPEG 264


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 1 TRYGPEG 7
TRY PEG
Sbjct: 258 TRYTPEG 264


>sp|VP3_EHDV1|CORE protein VP3|Epizootic hemorrhagic disease virus 1

Query: 2 RYGPEGE 8
+YGP GE
Sbjct: 415 QYGPTGE 421


>sp|VP3_EHDVA|CORE protein VP3|Epizootic hemorrhagic disease virus 2

Query: 2 RYGPEGE 8
+YGP GE
Sbjct: 415 QYGPTGE 421


>sp|GT_BPN15|TAIL assembly protein GT|Escherichia phage N15 (Bacteriophage N15)

Query: 2 RYGPEG 7
RYGP+G
Sbjct: 243 RYGPDG 248


>sp|GT_LAMBD|TAIL assembly protein GT|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 RYGPEGEAV 10
R+GP+G V
Sbjct: 240 RFGPDGNEV 248


>sp|YR821_MIMIV|UNCHARACTERIZED protein R821|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 YGPEGEAV 10
YGP+G+ +
Sbjct: 132 YGPDGKRI 139


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 4 GPEGEAV 10
GP GEAV
Sbjct: 569 GPPGEAV 575


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 TRYGPEGEAV 10
T GPEG A+
Sbjct: 2056 TWQGPEGNAI 2065




37|Sequence|181|190|EGEAVPVAIP

>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 1 EGEAVPVAIP 10
+GEAV + IP
Sbjct: 850 KGEAVELTIP 859


>sp|ENV_SRV1|ENVELOPE glycoprotein|Simian retrovirus SRV-1

Query: 2 GEAVPVAIP 10
G+ VP+A+P
Sbjct: 255 GDPVPLALP 263


>sp|ENV_MPMV|ENVELOPE glycoprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 2 GEAVPVAIP 10
G+ VP+A+P
Sbjct: 254 GDPVPLALP 262


>sp|ENV_SRV2R|ENVELOPE glycoprotein|Simian retrovirus SRV-2 (isolate 2R-18B1)

Query: 2 GEAVPVAIP 10
G VP+AIP
Sbjct: 250 GNPVPLAIP 258


>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 GEAVPVAI 9
GEAVPV I
Sbjct: 114 GEAVPVEI 121


>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 GEAVPVAI 9
GEAVPV I
Sbjct: 114 GEAVPVEI 121


>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 GEAVPVAI 9
GEAVPV I
Sbjct: 114 GEAVPVEI 121


>sp|ENV_SRV2|ENVELOPE glycoprotein|Simian retrovirus SRV-2

Query: 2 GEAVPVAIP 10
G +P+AIP
Sbjct: 250 GNPIPLAIP 258




38|Sequence|186|195|PVAIPEERAL

>sp|VP48_NPVOP|P48 protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 PVAIPEERAL 10
P+A+P+ RA
Sbjct: 119 PIAVPDVRAF 128




39|Sequence|191|200|EERALVFDVE

***** No hits found ******


40|Sequence|196|205|VFDVEVCLAE

>sp|YR009_MIMIV|UNCHARACTERIZED protein R9|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VFDVEVCLAE 10
+FD+E+C E
Sbjct: 136 IFDIEICKPE 145


>sp|YR21_TORVR|UNCHARACTERIZED protein in RNA2|Tomato ringspot virus (isolate raspberry)

Query: 4 VEVCLAE 10
VEVCLAE
Sbjct: 175 VEVCLAE 181


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 2 FDVEVCL 8
FD+++CL
Sbjct: 1344 FDLDICL 1350




41|Sequence|201|210|VCLAEGTCPT

>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 19 CKASGTCP 26


>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 19 CKASGTCP 26


>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 19 CKAAGTCP 26


>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43

Query: 2 CLAEGTCPT 10
C A GTCP+
Sbjct: 21 CKAAGTCPS 29


>sp|VL2_PCPV1|MINOR capsid protein L2|Pygmy chimpanzee papillomavirus type 1

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKASGTCP 28


>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54

Query: 2 CLAEGTCPT 10
C A GTCP+
Sbjct: 21 CKASGTCPS 29


>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKASGTCP 28


>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44

Query: 2 CLAEGTCPT 10
C A GTCP+
Sbjct: 21 CKAAGTCPS 29


>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55

Query: 2 CLAEGTCPT 10
C A GTCP+
Sbjct: 21 CKAAGTCPS 29


>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKATGTCP 28


>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31

Query: 2 CLAEGTCPT 10
C A GTCP+
Sbjct: 22 CKAAGTCPS 30


>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKASGTCP 28


>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKAAGTCP 28


>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKAAGTCP 28


>sp|VL2_MMPV1|MINOR capsid protein L2|Macaca mulata papillomavirus 1 (Rhpv

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 33 CKAAGTCP 40


>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 22 CKAAGTCP 29


>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKAAGTCP 28


>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKASGTCP 28


>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKAAGTCP 28


>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKASGTCP 28


>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKASGTCP 28


>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKAAGTCP 28


>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKAAGTCP 28


>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 20 CKATGTCP 27


>sp|E325_ADECC|EARLY E3 25 kDa glycoprotein|Canine adenovirus serotype 1 (strain

Query: 1 VCLAEGTC 8
+CL+ GTC
Sbjct: 78 LCLSNGTC 85


>sp|L_TSWV1|RNA-DIRECTED RNA polymerase L|Tomato spotted wilt virus (strain

Query: 1 VCLAEGTCPT 10
+CLAE +C T
Sbjct: 529 LCLAELSCDT 538


>sp|YR21_TORVR|UNCHARACTERIZED protein in RNA2|Tomato ringspot virus (isolate raspberry)

Query: 1 VCLAEGT 7
VCLAEGT
Sbjct: 177 VCLAEGT 183


>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKAAGTCP 28


>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 LAEGTCP 9
L +GTCP
Sbjct: 455 LCQGTCP 461


>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKASGTCP 28


>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKAAGTCP 28


>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)

Query: 5 EGTCP 9
EGTCP
Sbjct: 82 EGTCP 86


>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)

Query: 5 EGTCP 9
EGTCP
Sbjct: 82 EGTCP 86


>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)

Query: 5 EGTCP 9
EGTCP
Sbjct: 82 EGTCP 86


>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins

Query: 5 EGTCP 9
EGTCP
Sbjct: 82 EGTCP 86


>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)

Query: 5 EGTCP 9
EGTCP
Sbjct: 82 EGTCP 86


>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)

Query: 5 EGTCP 9
EGTCP
Sbjct: 82 EGTCP 86


>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 5 EGTCP 9
EGTCP
Sbjct: 82 EGTCP 86


>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)

Query: 5 EGTCP 9
EGTCP
Sbjct: 82 EGTCP 86


>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)

Query: 5 EGTCP 9
EGTCP
Sbjct: 82 EGTCP 86


>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)

Query: 5 EGTCP 9
EGTCP
Sbjct: 82 EGTCP 86


>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)

Query: 5 EGTCP 9
EGTCP
Sbjct: 82 EGTCP 86


>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 5 EGTCP 9
EGTCP
Sbjct: 82 EGTCP 86


>sp|KITH_EHV2|THYMIDINE kinase|Equine herpesvirus 2 (strain 86/87)

Query: 3 LAEGTCPT 10
L GTCP+
Sbjct: 283 LGSGTCPS 290


>sp|MVP_TMOB|MOVEMENT protein|Tobamovirus Ob

Query: 1 VCLAEGTCP 9
V ++EG CP
Sbjct: 143 VAMSEGWCP 151


>sp|A1_BPMX1|MINOR capsid protein A1|Qbeta virus (strain MX1)

Query: 2 CLAEGTC 8
C A GTC
Sbjct: 75 CTASGTC 81


>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62

Query: 2 CLAEGTCPT 10
C GTCP+
Sbjct: 20 CKVSGTCPS 28


>sp|E322_ADECG|EARLY E3 22.2 kDa glycoprotein|Canine adenovirus serotype 1 (strain

Query: 1 VCLAEGTC 8
+CL+ GTC
Sbjct: 57 LCLSNGTC 64


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 VCLAEG 6
+CLAEG
Sbjct: 1946 ICLAEG 1951


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 VCLAEG 6
+CLAEG
Sbjct: 1946 ICLAEG 1951


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 VCLAEG 6
+CLAEG
Sbjct: 1946 ICLAEG 1951


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 VCLAEG 6
+CLAEG
Sbjct: 1946 ICLAEG 1951


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 VCLAEG 6
+CLAEG
Sbjct: 1946 ICLAEG 1951


>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38

Query: 2 CLAEGTCP 9
C A TCP
Sbjct: 19 CKASNTCP 26


>sp|NCAP_KHUV|NUCLEOPROTEIN virus (KHUV)

Query: 3 LAEGTCP 9
L +GTCP
Sbjct: 80 LFDGTCP 86


>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28

Query: 2 CLAEGTCP 9
C A GTCP
Sbjct: 21 CKAAGTCP 28


>sp|E322_ADECR|EARLY E3 22.1 kDa glycoprotein|Canine adenovirus serotype 1 (strain

Query: 1 VCLAEGTC 8
+CL+ GTC
Sbjct: 56 LCLSNGTC 63


>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34

Query: 2 CLAEGTCP 9
C GTCP
Sbjct: 23 CKQSGTCP 30


>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56

Query: 2 CLAEGTCP 9
C GTCP
Sbjct: 21 CKLSGTCP 28


>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18

Query: 2 CLAEGTCP 9
C GTCP
Sbjct: 21 CKQSGTCP 28


>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53

Query: 2 CLAEGTCP 9
C GTCP
Sbjct: 21 CKQSGTCP 28


>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61

Query: 2 CLAEGTCP 9
C GTCP
Sbjct: 18 CKQSGTCP 25


>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45

Query: 2 CLAEGTCP 9
C GTCP
Sbjct: 21 CKQSGTCP 28


>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66

Query: 2 CLAEGTCP 9
C GTCP
Sbjct: 21 CKLSGTCP 28


>sp|Y030_OSHVF|UNCHARACTERIZED protein ORF30|Ostreid herpesvirus 1 (isolate France)

Query: 1 VCLAEGTC 8
VC GTC
Sbjct: 68 VCTRSGTC 75


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 5 EGTCPT 10
+GTCPT
Sbjct: 370 KGTCPT 375


>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39

Query: 2 CLAEGTCP 9
C GTCP
Sbjct: 21 CKQSGTCP 28


>sp|KITH_AHV1W|THYMIDINE kinase|Alcelaphine herpesvirus 1 (strain WC11)

Query: 2 CLAEGTCPT 10
C EG C T
Sbjct: 454 CATEGVCHT 462




42|Sequence|206|215|GTCPTLAVAI

>sp|EXO2_BPR69|EXONUCLEASE subunit 2|Escherichia phage RB69 (Bacteriophage RB69)

Query: 1 GTCPTLA 7
GTCPT A
Sbjct: 286 GTCPTCA 292


>sp|PTP1_NPVOP|PUTATIVE tyrosine-protein phosphatase 1|Orgyia pseudotsugata multicapsid

Query: 3 CPTLAVAI 10
CPT+ VA+
Sbjct: 153 CPTMLVAV 160


>sp|HEMA_CVP67|HEMAGGLUTININ-ESTERASE hemagglutinating encephalomyelitis virus (strain

Query: 1 GTCPTLAVAI 10
G CPT A I
Sbjct: 369 GNCPTAASII 378


>sp|HEMA_CVPIA|HEMAGGLUTININ-ESTERASE hemagglutinating encephalomyelitis virus (strain

Query: 1 GTCPTLAVAI 10
G CPT A I
Sbjct: 369 GNCPTAASII 378


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 2 TCPTLAVAI 10
T P+LAVA+
Sbjct: 2376 TLPSLAVAV 2384




43|Sequence|211|220|LAVAISPSAW

>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)

Query: 1 LAVAISPSAW 10
LAV ISP W
Sbjct: 561 LAVEISPGCW 570


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 1 LAVAISPSAW 10
LAV ISP W
Sbjct: 561 LAVEISPGCW 570


>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)

Query: 1 LAVAISPSAW 10
LAV ISP W
Sbjct: 561 LAVEISPGCW 570


>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 1 LAVAISPSAW 10
LAV ISP W
Sbjct: 561 LAVEISPGCW 570


>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 1 LAVAISPSAW 10
LAV +SP W
Sbjct: 575 LAVEVSPGCW 584


>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 1 LAVAISPSAW 10
LAV +SP W
Sbjct: 562 LAVEVSPGCW 571


>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great

Query: 1 LAVAISPSAW 10
LAV +SP W
Sbjct: 562 LAVEVSPGCW 571


>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)

Query: 1 LAVAISPSAW 10
LAV +SP W
Sbjct: 562 LAVEVSPGCW 571


>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)

Query: 1 LAVAISPSAW 10
LAV +SP W
Sbjct: 574 LAVEVSPGCW 583


>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)

Query: 1 LAVAISPSAW 10
LAV +SP W
Sbjct: 562 LAVEVSPGCW 571


>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 1 LAVAISPSAW 10
LAV +SP W
Sbjct: 562 LAVEVSPGCW 571


>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)

Query: 1 LAVAISPSAW 10
LAV +SP W
Sbjct: 562 LAVEVSPGCW 571


>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)

Query: 1 LAVAISPSAW 10
LAV +SP W
Sbjct: 562 LAVEVSPGCW 571


>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)

Query: 1 LAVAISPSAW 10
LAV +SP W
Sbjct: 568 LAVEVSPGCW 577


>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)

Query: 1 LAVAISPSAW 10
LAV +SP W
Sbjct: 568 LAVEVSPGCW 577


>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann

Query: 1 LAVAISPSAW 10
LAV +SP W
Sbjct: 575 LAVEVSPGCW 584


>sp|C_TUPVT|PROTEIN C|Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 4 AISPSAW 10
AISPS W
Sbjct: 186 AISPSTW 192


>sp|UL88_ELHVK|PROTEIN U59|Elephantid herpesvirus 1 (isolate Asian

Query: 3 VAISPSAW 10
VA+SP AW
Sbjct: 113 VALSPMAW 120




44|Sequence|216|225|SPSAWYSWCS

>sp|YR811_MIMIV|PUTATIVE ariadne-like RING finger protein|Acanthamoeba polyphaga mimivirus

Query: 5 WYSWC 9
WY WC
Sbjct: 885 WYGWC 889


>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)

Query: 3 SAWYSWC 9
+AW+ WC
Sbjct: 24 TAWWVWC 30


>sp|VG49_SHV21|UNCHARACTERIZED gene 49 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 SAWYSWC 9
SA+Y WC
Sbjct: 247 SAFYEWC 253


>sp|P1_BPPH6|MAJOR inner protein P1|Pseudomonas phage phi6 (Bacteriophage phi-6)

Query: 5 WYSW 8
WYSW
Sbjct: 636 WYSW 639


>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)

Query: 3 SAWYSWC 9
+AW+ WC
Sbjct: 24 AAWWVWC 30


>sp|VRPP_LAMBD|HELICASE loader|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 SPSAWYSWC 9
SP + +WC
Sbjct: 102 SPGQFVAWC 110


>sp|RECR_BPP1|RECOMBINASE cre|Escherichia phage P1 (Bacteriophage P1)

Query: 4 AWYSWC 9
+W +WC
Sbjct: 51 SWAAWC 56


>sp|ENRN_BPT3|ENDODEOXYRIBONUCLEASE 1|Enterobacteria phage T3 (Bacteriophage T3)

Query: 1 SPSAWYSWC 9
SP+++ WC
Sbjct: 105 SPTSYGEWC 113


>sp|EAR_EBVG|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4 AWYSWC 9
AW +WC
Sbjct: 103 AWMAWC 108


>sp|EAR_EBVB9|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 AWYSWC 9
AW +WC
Sbjct: 103 AWMAWC 108


>sp|EAR_EBVA8|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4 AWYSWC 9
AW +WC
Sbjct: 103 AWMAWC 108


>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 5 WYSWCS 10
W+SW S
Sbjct: 1970 WWSWVS 1975


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 SPSAWYSW 8
+ +AWY W
Sbjct: 1462 TAAAWYLW 1469




45|Sequence|221|230|YSWCSQRLVE

>sp|361L_IIV6|PROBABLE cysteine proteinase 361L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 YSWCSQ 6
YSWCSQ
Sbjct: 236 YSWCSQ 241


>sp|VF224_IIV6|PROBABLE cysteine proteinase 224L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 YSWCSQRL 8
YSWCS+ +
Sbjct: 164 YSWCSRNI 171


>sp|YL805_MIMIV|UNCHARACTERIZED protein L805|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YSWCSQRLV 9
+ WC++RL+
Sbjct: 47 FEWCNERLI 55


>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)

Query: 3 WCSQRLVE 10
WC +RLV+
Sbjct: 838 WCIKRLVK 845


>sp|MVP_TUMVQ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Quebec)

Query: 3 WCSQRLVE 10
WC +RLV+
Sbjct: 838 WCIKRLVK 845


>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)

Query: 3 WCSQRLVE 10
WC +RL++
Sbjct: 838 WCIKRLIK 845


>sp|MVP_TUMVJ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Japanese)

Query: 3 WCSQRLVE 10
WC +RL++
Sbjct: 838 WCIKRLIK 845


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 1 YSWCSQRLVE 10
+ WCS L E
Sbjct: 727 HGWCSSLLSE 736


>sp|GPK_BPPM2|UNCHARACTERIZED protein Gp-k|Pseudoalteromonas phage PM2 (Bacteriophage PM2)

Query: 2 SWCSQRLV 9
SW QRL+
Sbjct: 28 SWLKQRLI 35


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2 SWCSQRLV 9
SWC Q L+
Sbjct: 507 SWCRQLLL 514


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2 SWCSQRLV 9
SWC Q L+
Sbjct: 507 SWCRQLLL 514


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2 SWCSQRLV 9
SWC Q L+
Sbjct: 507 SWCRQLLL 514


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2 SWCSQRLV 9
SWC Q L+
Sbjct: 507 SWCRQLLL 514


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2 SWCSQRLV 9
SWC Q L+
Sbjct: 507 SWCRQLLL 514


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2 SWCSQRLV 9
SWC Q L+
Sbjct: 507 SWCRQLLL 514


>sp|NS2A_CVMJH|NON-STRUCTURAL protein 2a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 WCSQRL 8
WC +RL
Sbjct: 187 WCGERL 192


>sp|NS2A_CVMA5|NON-STRUCTURAL protein 2a|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 WCSQRL 8
WC +RL
Sbjct: 183 WCGERL 188


>sp|M22_BRSVA|PROTEIN M2-2|Bovine respiratory syncytial virus (strain

Query: 3 WCSQRLVE 10
W SQ L+E
Sbjct: 60 WTSQELIE 67




46|Sequence|226|235|QRLVEERYSW

>sp|YL269_MIMIV|UNCHARACTERIZED protein L269|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 VEERYSW 10
VEE YSW
Sbjct: 56 VEEFYSW 62


>sp|RDRP_BANNV|RNA-DIRECTED RNA polymerase VP1|Banna virus (BAV)

Query: 1 QRLVEERYSW 10
+RL++ YSW
Sbjct: 96 RRLIDFDYSW 105


>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United

Query: 1 QRLVEERYS 9
QR+++E+YS
Sbjct: 703 QRIIKEKYS 711


>sp|L_CPXVB|RNA-DIRECTED RNA polymerase L|Cupixi mammarenavirus (isolate Rat/Brasil/BeAn

Query: 1 QRLVEERYSW 10
Q L+E++YS+
Sbjct: 2056 QSLIEDKYSF 2065


>sp|RDRP_CLBVS|RNA replication polyprotein|Citrus leaf blotch virus (isolate

Query: 1 QRLVEERYSW 10
+RL+E + SW
Sbjct: 375 KRLIERQTSW 384


>sp|RDRP_AQRVA|RNA-DIRECTED RNA polymerase VP2|Aquareovirus A (isolate Chum

Query: 3 LVEERYSW 10
LV ER SW
Sbjct: 1187 LVRERASW 1194


>sp|TGB1_BNYVS|MOVEMENT protein TGB1|Beet necrotic yellow vein virus

Query: 1 QRLVEERYSW 10
+ LVE+ Y W
Sbjct: 48 KTLVEDGYKW 57




47|Sequence|231|240|ERYSWTSQLS

>sp|DPOL_BPSP1|DNA polymerase|Bacillus phage SP01 (Bacteriophage SP01)

Query: 1 ERYSWTSQLS 10
ERYSW+ +L+
Sbjct: 328 ERYSWSKRLA 337


>sp|CVC1_EHV1B|CAPSID vertex component 1|Equine herpesvirus 1 (strain Ab4p)

Query: 1 ERYSWT 6
ERY WT
Sbjct: 697 ERYCWT 702


>sp|049L_FRG3G|PUTATIVE SAP domain-containing protein 049L|Frog virus 3 (isolate Goorha)

Query: 2 RYSWT 6
RYSWT
Sbjct: 240 RYSWT 244


>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)

Query: 1 ERYSWTSQ 8
ERY +TSQ
Sbjct: 35 ERYFYTSQ 42


>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)

Query: 1 ERYSWTSQ 8
ERY +TSQ
Sbjct: 32 ERYFYTSQ 39


>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)

Query: 1 ERYSWTSQ 8
ERY +TSQ
Sbjct: 32 ERYFYTSQ 39


>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)

Query: 1 ERYSWTSQ 8
ERY +TSQ
Sbjct: 35 ERYFYTSQ 42


>sp|VF019_IIV3|PUTATIVE MSV199 domain-containing protein 093L|Invertebrate iridescent

Query: 2 RYSWTSQLS 10
RY+WT +L
Sbjct: 71 RYTWTMELD 79




48|Sequence|236|245|TSQLSPADLI

>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)

Query: 2 SQLSPADLI 10
S+ PADLI
Sbjct: 250 SEFDPADLI 258


>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 SQLSPADLI 10
S+ PADLI
Sbjct: 250 SEFDPADLI 258


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 3 QLSPADL 9
QLSPADL
Sbjct: 1166 QLSPADL 1172


>sp|TRX2_EHV1B|TRIPLEX capsid protein 2|Equine herpesvirus 1 (strain Ab4p)

Query: 2 SQLSPADL 9
S LSPADL
Sbjct: 14 SDLSPADL 21


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 QLSPADLI 10
QLSP D++
Sbjct: 2248 QLSPGDIV 2255


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 QLSPADLI 10
QLSP D++
Sbjct: 2278 QLSPGDIV 2285


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 QLSPADLI 10
QLSP D++
Sbjct: 2278 QLSPGDIV 2285


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 QLSPADLI 10
QLSP D++
Sbjct: 2278 QLSPGDIV 2285




49|Sequence|241|250|PADLIPLEVP

>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 PADLIPLEV 9
P DLIP+ V
Sbjct: 290 PVDLIPIVV 298


>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 PADLIPLEV 9
P DLIP+ V
Sbjct: 290 PVDLIPIVV 298


>sp|NEF_HV2D2|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 4 LIPLEVP 10
L+P+EVP
Sbjct: 160 LVPVEVP 166


>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49

Query: 1 PADLIPLEV 9
PAD+IP++
Sbjct: 98 PADIIPIDT 106




50|Sequence|246|255|PLEVPTGASS

>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1 PLEVPTGAS 9
PL VPTGA+
Sbjct: 296 PLTVPTGAT 304


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1 PLEVPTGASS 10
PL +PTG+++
Sbjct: 250 PLSIPTGSAN 259


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1 PLEVPTGASS 10
PL +P+G+S+
Sbjct: 250 PLSIPSGSSN 259


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 1 PLEVPTGAS 9
P+ VPTG S
Sbjct: 351 PIRVPTGCS 359


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 1 PLEVPTGAS 9
PL PTG+S
Sbjct: 296 PLNAPTGSS 304


>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)

Query: 2 LEVPTG 7
LEVPTG
Sbjct: 76 LEVPTG 81


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 1 PLEVPTGASS 10
PL+ TGASS
Sbjct: 297 PLDYVTGASS 306


>sp|POL2_ARMVN|RNA2 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 PLEVPTGA 8
PLE P GA
Sbjct: 155 PLEYPQGA 162


>sp|POL2_ARMVS|RNA2 polyprotein|Arabis mosaic virus (isolate Syrah)

Query: 1 PLEVPTGA 8
PLE P GA
Sbjct: 176 PLEYPQGA 183


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 1 PLEVPTGASS 10
PL+ TGASS
Sbjct: 297 PLDYVTGASS 306


>sp|POL2_GFLVN|RNA2 polyprotein|Grapevine fanleaf virus (isolate NW)

Query: 1 PLEVPTGA 8
PLE P GA
Sbjct: 158 PLEYPQGA 165


>sp|POL2_GFLV|RNA2 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 1 PLEVPTGA 8
PLE P GA
Sbjct: 157 PLEYPQGA 164




51|Sequence|251|260|TGASSPTQRD

>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 3 ASSPTQR 9
AS+PTQR
Sbjct: 920 ASAPTQR 926


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 2 GASSPTQRD 10
GA PT RD
Sbjct: 523 GAGKPTSRD 531


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2 GASSPTQRD 10
GA PT RD
Sbjct: 525 GAGKPTSRD 533


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2 GASSPTQRD 10
GA PT RD
Sbjct: 525 GAGKPTSRD 533


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 2 GASSPTQRD 10
GA PT RD
Sbjct: 525 GAGKPTSRD 533


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 2 GASSPTQRD 10
GA PT RD
Sbjct: 525 GAGKPTSRD 533


>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)

Query: 2 GASSPTQRD 10
GA PT RD
Sbjct: 525 GAGKPTSRD 533


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 2 GASSPTQRD 10
GA PT RD
Sbjct: 724 GAPKPTSRD 732


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 2 GASSPTQRD 10
GA PT RD
Sbjct: 724 GAPKPTSRD 732




52|Sequence|256|265|PTQRDWQEQL

>sp|YL484_MIMIV|PUTATIVE ankyrin repeat protein L484|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PTQRDWQEQL 10
P RD+Q+QL
Sbjct: 1544 PKLRDYQKQL 1553


>sp|YL294_MIMIV|UNCHARACTERIZED protein L294|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PTQRDWQEQL 10
PTQR W L
Sbjct: 174 PTQRVWNNYL 183


>sp|CATV_NPVLD|VIRAL cathepsin|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 1 PTQRDWQEQ 9
P DW+EQ
Sbjct: 145 PLHFDWREQ 153


>sp|CAPSD_FDVS|INNER capsid protein S2|Fiji disease virus (isolate Sugarcane)

Query: 1 PTQRDWQ 7
PT +DW+
Sbjct: 404 PTDQDWE 410


>sp|MVP_TAVCV|MOVEMENT protein|Taro vein chlorosis virus (TAVCV)

Query: 1 PTQRDWQEQL 10
PT WQ+++
Sbjct: 95 PTSTKWQQEV 104


>sp|REP_MYMVV|REPLICATION-ASSOCIATED protein|Mungbean yellow mosaic virus (strain

Query: 3 QRDWQEQL 10
QRDWQ +
Sbjct: 277 QRDWQSNV 284


>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 1 PTQRDW 6
PT+R+W
Sbjct: 655 PTEREW 660


>sp|REP_TYLCC|REPLICATION-ASSOCIATED protein|Tomato yellow leaf curl China

Query: 3 QRDWQ 7
QRDWQ
Sbjct: 278 QRDWQ 282


>sp|REP_CALCV|REPLICATION-ASSOCIATED protein|Cabbage leaf curl virus (isolate

Query: 3 QRDWQ 7
QRDWQ
Sbjct: 279 QRDWQ 283


>sp|REP_SLCV|REPLICATION-ASSOCIATED protein|Squash leaf curl virus (SLCV)

Query: 3 QRDWQ 7
QRDWQ
Sbjct: 277 QRDWQ 281


>sp|REP_CLVK|REPLICATION-ASSOCIATED protein|African cassava mosaic virus (isolate

Query: 2 TQRDWQ 7
+QRDWQ
Sbjct: 276 SQRDWQ 281


>sp|TERL_BPLSK|TERMINASE large subunit|Lactococcus phage SK1 (Lactococcus lactis

Query: 1 PTQRDWQE 8
PTQR W E
Sbjct: 68 PTQRWWYE 75


>sp|TERL_BPLP2|TERMINASE large subunit|Lactococcus phage p2 (Lactococcus lactis

Query: 1 PTQRDWQE 8
PTQR W E
Sbjct: 68 PTQRWWYE 75


>sp|REP_TYLCI|REPLICATION-ASSOCIATED protein|Tomato yellow leaf curl virus

Query: 3 QRDWQ 7
QRDWQ
Sbjct: 276 QRDWQ 280


>sp|REP_CLVN|REPLICATION-ASSOCIATED protein|African cassava mosaic virus (isolate

Query: 2 TQRDWQ 7
+QRDWQ
Sbjct: 276 SQRDWQ 281


>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P

Query: 1 PTQRDWQE 8
PT++ W+E
Sbjct: 257 PTRKPWKE 264


>sp|H_BPPHM|MINOR spike protein H|Bdellovibrio phage phiMH2K (Bacteriophage

Query: 4 RDWQEQL 10
R WQEQ+
Sbjct: 50 RKWQEQM 56


>sp|GAG_IPMA|INTRACISTERNAL A-particle Gag-related polyprotein|Mouse intracisternal a-particle

Query: 1 PTQRDW 6
P QRDW
Sbjct: 309 PEQRDW 314




53|Sequence|261|270|WQEQLVVGHN

>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 2 QEQLVVGH 9
QEQL GH
Sbjct: 1041 QEQLAAGH 1048


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 WQEQLVVG 8
W E+LVVG
Sbjct: 3077 WFEELVVG 3084


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 WQEQLVVG 8
W E+LVVG
Sbjct: 3106 WFEELVVG 3113


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 WQEQLVVG 8
W E+LVVG
Sbjct: 3107 WFEELVVG 3114


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 WQEQLVVG 8
W E+LVVG
Sbjct: 3107 WFEELVVG 3114


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 2 QEQLVVGH 9
QEQL +GH
Sbjct: 908 QEQLRLGH 915


>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 1 WQEQLVVGHN 10
WQ + V HN
Sbjct: 888 WQSPISVWHN 897


>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)

Query: 1 WQEQLVVGH 9
W Q+ +GH
Sbjct: 1196 WDRQIQMGH 1204


>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)

Query: 1 WQEQLVVGH 9
W Q+ +GH
Sbjct: 1196 WDRQIQMGH 1204


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 2 QEQLVVGH 9
QEQL GH
Sbjct: 953 QEQLQAGH 960




54|Sequence|266|275|VVGHNVSFDR

>sp|GT313_AFV1Y|PUTATIVE glycosyltransferase ORF313|Acidianus filamentous virus 1 (isolate

Query: 2 VGHNVSFDR 10
+GHN FDR
Sbjct: 144 IGHNNDFDR 152


>sp|DPOZ_BPSHA|DNA polymerase DpoZ|Acinetobacter phage SH-Ab 15497

Query: 1 VVGHNVSFD 9
+V HN+ FD
Sbjct: 66 IVNHNIKFD 74


>sp|DPOZ_BPVC8|DNA polymerase DpoZ|Vibrio phage phiVC8

Query: 1 VVGHNVSFD 9
+V HN SFD
Sbjct: 77 IVCHNASFD 85


>sp|DPOL_ADES1|DNA polymerase|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 VVGHNVS-FD 9
VVGHN++ FD
Sbjct: 296 VVGHNITGFD 305


>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain

Query: 1 VVGHNVS-FD 9
VVGHN++ FD
Sbjct: 361 VVGHNITGFD 370


>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3

Query: 1 VVGHNVS-FD 9
VVGHN++ FD
Sbjct: 373 VVGHNINGFD 382


>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a

Query: 3 GHNVSFDR 10
GH VS DR
Sbjct: 536 GHPVSIDR 543


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 4 HNVSFD 9
HN+SFD
Sbjct: 590 HNLSFD 595


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 4 HNVSFD 9
HN+SFD
Sbjct: 590 HNLSFD 595


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 4 HNVSFD 9
HN+SFD
Sbjct: 590 HNLSFD 595


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 4 HNVSFD 9
HN+SFD
Sbjct: 590 HNLSFD 595


>sp|Y082_OSHVF|UNCHARACTERIZED protein ORF82|Ostreid herpesvirus 1 (isolate France)

Query: 1 VVGHNVSFD 9
++GH FD
Sbjct: 19 IIGHTAQFD 27


>sp|NV_IHNVW|NON-VIRION protein|Infectious hematopoietic necrosis virus (strain

Query: 1 VVGHNVSFD 9
V GH SFD
Sbjct: 23 VAGHGFSFD 31


>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)

Query: 3 GHNVSFDR 10
GHN FD+
Sbjct: 335 GHNYYFDK 342


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 1 VVGHNVS-FD 9
+VGHN++ FD
Sbjct: 404 IVGHNINGFD 413


>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 1 VVGHNVS-FD 9
+VGHN++ FD
Sbjct: 277 IVGHNINGFD 286


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 1 VVGHNVS-FD 9
+VGHN++ FD
Sbjct: 338 IVGHNINGFD 347


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 1 VVGHNVS-FD 9
+VGHN++ FD
Sbjct: 413 IVGHNINGFD 422


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 1 VVGHNVS-FD 9
+VGHN++ FD
Sbjct: 408 IVGHNINGFD 417


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 1 VVGHNVS-FD 9
+VGHN++ FD
Sbjct: 413 IVGHNINGFD 422


>sp|DPOZ_BPPMB|DNA polymerase DpoZ|Salmonella phage PMBT28

Query: 2 VGHNVSFD 9
V HN+ FD
Sbjct: 68 VNHNMKFD 75


>sp|DPOL_BPT5|DNA polymerase|Escherichia phage T5 (Enterobacteria phage

Query: 1 VVGHNVSFD 9
+V HN+ FD
Sbjct: 216 IVFHNLKFD 224


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 VVGHNVSF 8
++GH +SF
Sbjct: 1251 IIGHGMSF 1258


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 VVGHNVSF 8
++GH +SF
Sbjct: 1251 IIGHGMSF 1258


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 VVGHNVSF 8
++GH +SF
Sbjct: 1251 IIGHGMSF 1258


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 VVGHNVSF 8
++GH +SF
Sbjct: 1251 IIGHGMSF 1258


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 VVGHNVSF 8
++GH +SF
Sbjct: 1251 IIGHGMSF 1258


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 VVGHNVSF 8
++GH +SF
Sbjct: 1251 IIGHGMSF 1258


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 VVGHNVSF 8
++GH +SF
Sbjct: 1251 IIGHGMSF 1258


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 VVGHNVSF 8
++GH +SF
Sbjct: 1251 IIGHGMSF 1258




55|Sequence|271|280|VSFDRAHIRE

>sp|VP2_BTV3V|OUTER capsid protein VP2|Bluetongue virus 3 (isolate South

Query: 2 SFDRAHIR 9
SFDR+HI+
Sbjct: 269 SFDRSHIK 276


>sp|Y013_NPVOP|UNCHARACTERIZED 36.6 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 SFDRAHIRE 10
+FDR H+R+
Sbjct: 85 NFDRQHVRQ 93


>sp|Y104_OSHVF|UNCHARACTERIZED protein ORF104|Ostreid herpesvirus 1 (isolate France)

Query: 1 VSFDRAHIR 9
+SFD H+R
Sbjct: 1060 ISFDGTHMR 1068


>sp|PRIM_SUHVK|DNA primase|Suid herpesvirus 1 (strain Kaplan)

Query: 2 SFDRAHIRE 10
SF+RA +RE
Sbjct: 312 SFNRARLRE 320


>sp|UDPE_NPVCD|ECDYSTEROID UDP-glucosyltransferase|Choristoneura fumiferana defective

Query: 3 FDRAHIR 9
FD AH+R
Sbjct: 120 FDNAHVR 126


>sp|PRO_ADEG8|PROTEASE adenovirus 8 (strain ATCC

Query: 2 SFDRAHIR 9
SFDR H R
Sbjct: 132 SFDRYHTR 139


>sp|MMP_SFAVA|PUTATIVE matrix metalloproteinase|Spodoptera frugiperda ascovirus 1a

Query: 4 DRAHIR 9
DRAHIR
Sbjct: 114 DRAHIR 119




56|Sequence|276|285|AHIREQYLIQ

>sp|TATR_NPVBM|TRANS-ACTIVATING transcriptional regulatory protein|Bombyx mori nuclear polyhedrosis

Query: 2 HIREQYLIQ 10
HI EQYL Q
Sbjct: 470 HIVEQYLTQ 478


>sp|IE1_NPVAC|TRANS-ACTIVATING transcriptional regulatory protein|Autographa californica nuclear

Query: 2 HIREQYLIQ 10
HI EQYL Q
Sbjct: 465 HIVEQYLTQ 473


>sp|PG069_VACCW|PROTEIN OPG069|Vaccinia virus (strain Western Reserve)

Query: 2 HIREQYLI 9
HI EQYLI
Sbjct: 90 HIYEQYLI 97


>sp|PG069_VACCC|PROTEIN OPG069|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 HIREQYLI 9
HI EQYLI
Sbjct: 90 HIYEQYLI 97


>sp|PG069_MONPV|PROTEIN OPG069|Monkeypox virus (MPXV)

Query: 2 HIREQYLI 9
HI EQYLI
Sbjct: 90 HIYEQYLI 97


>sp|GB_TUHV2|ENVELOPE glycoprotein B|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 2 HIREQY 7
H+REQY
Sbjct: 326 HVREQY 331


>sp|POL_MLVFP|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 1 AHIREQYLIQ 10
AH++ YL+Q
Sbjct: 1624 AHLQALYLVQ 1633


>sp|POL_MLVCB|GAG-POL polyprotein|Cas-Br-E murine leukemia virus

Query: 1 AHIREQYLIQ 10
AH++ YL+Q
Sbjct: 1622 AHLQALYLVQ 1631


>sp|POL_MLVMS|GAG-POL polyprotein|Moloney murine leukemia virus (isolate

Query: 1 AHIREQYLIQ 10
AH++ YL+Q
Sbjct: 1624 AHLQALYLVQ 1633


>sp|POL_MLVFF|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 1 AHIREQYLIQ 10
AH++ YL+Q
Sbjct: 1624 AHLQALYLVQ 1633


>sp|POL_MLVF5|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 1 AHIREQYLIQ 10
AH++ YL+Q
Sbjct: 1625 AHLQALYLVQ 1634


>sp|RPOL_BPKMV|DNA-DIRECTED RNA polymerase|Pseudomonas phage phiKMV

Query: 2 HIREQYL 8
HIREQ++
Sbjct: 769 HIREQFI 775




57|Sequence|281|290|QYLIQGSRMR

>sp|VG28_ICHVA|UNCHARACTERIZED protein ORF28|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 QYLIQGSRM 9
QYLI+GS++
Sbjct: 277 QYLIEGSKL 285


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 2 YLIQGSRMR 10
YL+ G RMR
Sbjct: 256 YLVTGQRMR 264


>sp|MVP_PVMA|P3N-PIPO polyprotein|Potato virus A (PVA)

Query: 2 YLIQGSRMR 10
YL+ G RMR
Sbjct: 256 YLVTGQRMR 264


>sp|TMP_BPPHC|PROBABLE tape measure protein|Streptomyces phage phiC31 (Bacteriophage

Query: 1 QYLIQGSRM 9
Q +IQG+RM
Sbjct: 467 QSMIQGARM 475


>sp|RDRP_PZSVT|RNA-DIRECTED RNA polymerase 2a|Pelargonium zonate spot virus (isolate

Query: 1 QYLIQGSRM 9
QY ++GS++
Sbjct: 227 QYFVEGSKL 235


>sp|RDRP_PMVK|RNA-DIRECTED RNA polymerase|Panicum mosaic virus (strain United

Query: 1 QYLIQGSRM 9
+YL+ G RM
Sbjct: 714 KYLVDGKRM 722


>sp|NEEDL_BPT4|PRE-BASEPLATE central spike protein Gp5|Enterobacteria phage T4 (Bacteriophage

Query: 1 QYLIQGSRM 9
QY I GSR+
Sbjct: 564 QYTIDGSRI 572




58|Sequence|286|295|GSRMRFLDTM

***** No hits found ******


59|Sequence|291|300|FLDTMSMHMA

>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 FLDTMSMHMA 10
F+DT++MHM+
Sbjct: 3556 FIDTLTMHMS 3565


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 FLDTMSMHMA 10
F+DT++ HM+
Sbjct: 3556 FIDTLTKHMS 3565


>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus

Query: 1 FLDTMSMHMA 10
F+DTMS+++A
Sbjct: 31 FVDTMSIYIA 40


>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 FLDTMSMHMA 10
F+DTMS+++A
Sbjct: 31 FVDTMSIYIA 40


>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)

Query: 1 FLDTMSMHMA 10
F+DTMS+++A
Sbjct: 31 FVDTMSIYIA 40


>sp|PG089_VACCW|PUTATIVE nuclease OPG089|Vaccinia virus (strain Western Reserve)

Query: 1 FLDTMSMHMA 10
F+DTMS+++A
Sbjct: 31 FVDTMSIYIA 40


>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FLDTMSMHMA 10
F+DTMS+++A
Sbjct: 31 FVDTMSIYIA 40


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 FLDTMSMHM 9
F+DT++ HM
Sbjct: 3555 FIDTITDHM 3563


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 1 FLDTMSMHM 9
F+DT++ HM
Sbjct: 3645 FIDTITDHM 3653


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 FLDTMSMHM 9
F+DT++ HM
Sbjct: 3564 FIDTITDHM 3572


>sp|VP2_BTV10|OUTER capsid protein VP2|Bluetongue virus 10 (isolate USA)

Query: 2 LDTMSMHMA 10
LDT+ +H+A
Sbjct: 835 LDTLKLHVA 843


>sp|RIR1_IIV6|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 FLDTMSMHM 9
F+DT + HM
Sbjct: 247 FIDTCNKHM 255


>sp|CAPSP_ASFWA|PENTON protein H240R|African swine fever virus (isolate

Query: 2 LDTMSMHM 9
LDT+S+H+
Sbjct: 154 LDTLSVHV 161


>sp|CAPSP_ASFP4|PENTON protein H240R|African swine fever virus (isolate

Query: 2 LDTMSMHM 9
LDT+S+H+
Sbjct: 158 LDTLSVHV 165


>sp|Y028_OSHVF|UNCHARACTERIZED protein ORF28|Ostreid herpesvirus 1 (isolate France)

Query: 1 FLDTMSMHM 9
++DTM+ HM
Sbjct: 408 YVDTMTGHM 416




60|Sequence|296|305|SMHMAISGLS

>sp|RP147_FOWPN|DNA-DIRECTED RNA polymerase 147 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 3 HMAISGL 9
HM+ISGL
Sbjct: 539 HMSISGL 545


>sp|PHUZ_BPDPK|PHAGE tubulin-like protein|Pseudomonas phage phiKZ

Query: 1 SMHMAISGLS 10
MH I+GLS
Sbjct: 275 QMHFVINGLS 284




61|Sequence|301|310|ISGLSSFQRS

***** No hits found ******


62|Sequence|306|315|SFQRSLWIAA

>sp|RDRP_ICRSV|RNA replication protein|Indian citrus ringspot virus (isolate

Query: 2 FQRSLW 7
FQ+SLW
Sbjct: 1318 FQQSLW 1323


>sp|VPA_BPP2|REPLICATION gene A protein|Escherichia phage P2 (Bacteriophage P2)

Query: 1 SFQRSLW 7
+FQR LW
Sbjct: 91 TFQRRLW 97


>sp|SOC_BPT4|SMALL outer capsid protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 QRSLWIAA 10
QR+ WIAA
Sbjct: 64 QRTEWIAA 71




63|Sequence|311|320|LWIAAKQGKH

>sp|DUHM_BPW14|DEOXYURIDYLATE hydroxymethyltransferase|Delftia phage PhiW-14 (Deftia acidovorans

Query: 1 LWIAAKQGK 9
+IAAKQG+
Sbjct: 313 FYIAAKQGE 321


>sp|HELIC_BPT4|DNAB-LIKE replicative helicase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 LWIAAKQGKH 10
LW AA+ GK
Sbjct: 350 LWTAAQVGKQ 359


>sp|VFIL_BP186|PROTEIN fil|Escherichia phage 186 (Bacteriophage 186)

Query: 2 WIAAKQGK 9
WIA K GK
Sbjct: 25 WIAGKDGK 32


>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto

Query: 1 LWIAAKQGKH 10
LW+ K+G +
Sbjct: 165 LWLTEKEGSY 174


>sp|V063_FOWPN|PROTEIN FPV063|Fowlpox virus (strain NVSL) (FPV)

Query: 1 LWIAAKQGKH 10
LWI + G H
Sbjct: 257 LWIIGEYGTH 266




64|Sequence|316|325|KQGKHKVQPP

>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 5 HKVQPP 10
HKV PP
Sbjct: 3348 HKVNPP 3353


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 5 HKVQPP 10
HKV PP
Sbjct: 3348 HKVNPP 3353


>sp|LTP_MUHVK|LARGE tegument protein deneddylase|Murid herpesvirus 1 (strain K181)

Query: 3 GKHKVQPP 10
G+HK PP
Sbjct: 1421 GQHKKDPP 1428


>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1

Query: 3 GKHKVQPP 10
G H +QPP
Sbjct: 249 GPHSIQPP 256


>sp|VGLG_TRTV|MAJOR surface glycoprotein G|Turkey rhinotracheitis virus (TRTV)

Query: 1 KQGKHKVQPP 10
K G HK PP
Sbjct: 221 KTGTHKSGPP 230




65|Sequence|321|330|KVQPPTKQGQ

>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 VQPPTKQ 8
+QPPTK+
Sbjct: 69 LQPPTKK 75


>sp|POLG_SUMVS|GENOME polyprotein|Sugarcane mosaic virus (strain SC)

Query: 3 QPPTKQG 9
QPPT QG
Sbjct: 92 QPPTTQG 98




66|Sequence|326|335|TKQGQKSQRK

>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)

Query: 1 TKQGQKSQ 8
T QGQK+Q
Sbjct: 7 TPQGQKTQ 14


>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 TKQGQKSQ 8
T QGQK+Q
Sbjct: 7 TPQGQKTQ 14




67|Sequence|331|340|KSQRKARRGP

>sp|TAT_HV1U4|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 1 KSQRKARRGP 10
K +RK RRGP
Sbjct: 49 KKKRKPRRGP 58




68|Sequence|336|345|ARRGPAISSW

>sp|DPO24_BPK64|DEPOLYMERASE, capsule K1-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 4 GPAISSW 10
GPA+SSW
Sbjct: 324 GPALSSW 330


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 ARRGPAISSW 10
AR PA SSW
Sbjct: 1648 ARLSPAGSSW 1657


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 ARRGPAISSW 10
AR PA SSW
Sbjct: 1648 ARLSPAGSSW 1657


>sp|UDPE_NPVOP|ECDYSTEROID UDP-glucosyltransferase|Orgyia pseudotsugata multicapsid

Query: 2 RRGPAISSW 10
RRG A+S W
Sbjct: 193 RRGGALSEW 201


>sp|US02_BHV1S|PROTEIN US2 homolog|Bovine herpesvirus 1.2 (strain ST)

Query: 2 RRGPAISS 9
RRGPAI+S
Sbjct: 158 RRGPAIAS 165


>sp|DEPOL_BPKNT|DEPOLYMERASE, capsule K1-specific|Klebsiella phage NTUH-K2044-K1-1

Query: 4 GPAISSW 10
GPA SSW
Sbjct: 69 GPAYSSW 75


>sp|DEPOL_BPK71|DEPOLYMERASE, capsule K1-specific|Klebsiella phage KpV71 (Bacteriophage KpV71)

Query: 4 GPAISSW 10
GPA SSW
Sbjct: 69 GPAYSSW 75


>sp|ARBH_MHV68|APOPTOSIS regulator Bcl-2 homolog|Murid herpesvirus 4 (MuHV-4) (Murine

Query: 1 ARRGPAISSW 10
A GPA+ +W
Sbjct: 58 ADYGPALKNW 67


>sp|UL32_PSHV1|PACKAGING protein UL32|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 ARRGPAISSW 10
A RGP S+W
Sbjct: 252 ATRGPGDSTW 261


>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)

Query: 2 RRGPAIS 8
RRGPA+S
Sbjct: 106 RRGPALS 112


>sp|GAG_AVIER|GAG polyprotein|Avian erythroblastosis virus (strain ES4)

Query: 4 GPAISSW 10
GPA++ W
Sbjct: 131 GPALTDW 137




69|Sequence|341|350|AISSWDWLDI

>sp|RDRP_MBVLF|RNA-DIRECTED RNA polymerase|Mushroom bacilliform virus (isolate Australia/AUS

Query: 2 ISSWDW 7
IS WDW
Sbjct: 206 ISGWDW 211


>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+WLDI
Sbjct: 668 SIWNWLDI 675


>sp|ENV_SIVTN|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate TAN1)

Query: 3 SSWDWLDI 10
S WDW DI
Sbjct: 669 SLWDWFDI 676


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 2 ISSWDWL 8
IS W WL
Sbjct: 1103 ISPWQWL 1109


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 3 SSWDWL 8
+SW+WL
Sbjct: 1202 TSWNWL 1207


>sp|GAG_SCVLA|MAJOR capsid protein|Saccharomyces cerevisiae virus L-A (ScV-L-A)

Query: 2 ISSWDWLD 9
I+SW W D
Sbjct: 111 ITSWRWYD 118


>sp|ENV_SIVMB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate MB66)

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 685 SLWNWFDI 692


>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5

Query: 4 SWDW 7
SWDW
Sbjct: 555 SWDW 558


>sp|RDRP_SCVLA|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-A

Query: 2 ISSWDWLD 9
I+SW W D
Sbjct: 111 ITSWRWYD 118


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 2 ISSWDWL 8
+S W WL
Sbjct: 1102 VSPWQWL 1108


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 2 ISSWDWL 8
+S W WL
Sbjct: 1102 VSPWQWL 1108


>sp|YL109_MIMIV|PUTATIVE ankyrin repeat protein L109|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 WDWLDI 10
W WLD+
Sbjct: 257 WTWLDV 262


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 3 SSWDWL 8
+SW WL
Sbjct: 1211 TSWSWL 1216


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 3 SSWDWL 8
+SW WL
Sbjct: 1211 TSWSWL 1216


>sp|VE2_CRPVK|REGULATORY protein E2|Cottontail rabbit papillomavirus (strain Kansas)

Query: 3 SSWDWLD 9
++W W+D
Sbjct: 339 TTWSWVD 345


>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 663 SLWNWFDI 670


>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 644 SLWNWFDI 651


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 654 SLWNWFDI 661


>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 659 SLWNWFDI 666


>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P

Query: 4 SWDWLD 9
+W WLD
Sbjct: 402 NWPWLD 407


>sp|HEMA_CVPV|HEMAGGLUTININ-ESTERASE coronavirus (PV) (Puffinosis virus)

Query: 4 SWDWLDI 10
++DWLD+
Sbjct: 59 AFDWLDL 65


>sp|ENV_SIVEK|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate EK505)

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 640 SLWNWFDI 647


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 681 SLWNWFDI 688


>sp|NRAM_I79A6|NEURAMINIDASE A virus (strain A/Equine/New

Query: 2 ISSWDWLD 9
I+SW W D
Sbjct: 452 IASWSWHD 459


>sp|ENV_SIVCZ|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate CPZ

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 659 SLWNWFDI 666


>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 640 SLWNWFDI 647


>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 658 SLWNWFDI 665


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 665 SLWNWFDI 672


>sp|030L_IIV3|UNCHARACTERIZED protein 030L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 AISSWDWLD 9
A S W+W D
Sbjct: 83 AESVWEWFD 91


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 655 SLWNWFDI 662


>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)

Query: 2 ISSWDWLD 9
ISS DW D
Sbjct: 481 ISSIDWYD 488


>sp|NRAM_I85A5|NEURAMINIDASE A virus (strain A/Equine/Santiago/1/1985

Query: 2 ISSWDWLD 9
I+SW W D
Sbjct: 452 IASWSWHD 459


>sp|NRAM_I81A2|NEURAMINIDASE A virus (strain A/Equine/Kentucky/1/1981)

Query: 2 ISSWDWLD 9
I+SW W D
Sbjct: 452 IASWSWHD 459


>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 654 SLWNWFDI 661


>sp|NRAM_I86A3|NEURAMINIDASE A virus (strain A/Equine/Tennessee/5/1986

Query: 2 ISSWDWLD 9
I+SW W D
Sbjct: 452 IASWSWHD 459


>sp|REPA_MSVSE|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype C

Query: 1 AISSWDWLD 9
AIS +WLD
Sbjct: 233 AISDLEWLD 241


>sp|POL2_GCMV|RNA2 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 3 SSWDWL 8
+ WDWL
Sbjct: 1292 AHWDWL 1297


>sp|NRAM_I91A0|NEURAMINIDASE A virus (strain A/Equine/Alaska/1/1991

Query: 2 ISSWDWLD 9
I+SW W D
Sbjct: 452 IASWSWHD 459


>sp|VP3_SVSAP|UNCHARACTERIZED protein VP3|Sapporo virus (isolate

Query: 3 SSWDWL 8
S+W WL
Sbjct: 42 SAWSWL 47


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 4 SWDWLD 9
+W+WLD
Sbjct: 2266 NWNWLD 2271


>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 659 SLWNWFDI 666


>sp|VP3_SVM93|UNCHARACTERIZED protein VP3|Sapporo virus (strain Human/United

Query: 3 SSWDWL 8
S+W WL
Sbjct: 42 SAWSWL 47


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 SSWDWLDI 10
S W+W DI
Sbjct: 669 SLWNWFDI 676


>sp|CAPSD_BPPAJ|CAPSID polyprotein|Pseudomonas phage PAJU2

Query: 4 SWDWLDI 10
SW+W ++
Sbjct: 130 SWEWFEL 136


>sp|REPA_MSVTA|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype B

Query: 1 AISSWDWLD 9
AIS +W+D
Sbjct: 233 AISDLEWMD 241


>sp|RNH_BPT4|RIBONUCLEASE H|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 SSWDW 7
S+WDW
Sbjct: 97 STWDW 101


>sp|NRAM_I69A2|NEURAMINIDASE A virus (strain A/Equine/Sao

Query: 2 ISSWDWLD 9
++SW W D
Sbjct: 452 VASWSWHD 459


>sp|VE1_CRPVK|REPLICATION protein E1|Cottontail rabbit papillomavirus (strain Kansas)

Query: 4 SWDWL 8
SWDW+
Sbjct: 185 SWDWV 189




70|Sequence|346|355|DWLDISSVNS

>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 2 WLDISSVNS 10
WL ++S+NS
Sbjct: 2282 WLKVASINS 2290


>sp|MVP_SBMVG|P3N-PIPO polyprotein|Soybean mosaic virus (strain G2)

Query: 2 WLDISSVN 9
W D++S+N
Sbjct: 94 WFDLASLN 101


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 2 WLDISSVN 9
W D++S+N
Sbjct: 94 WFDLASLN 101




71|Sequence|351|360|SSVNSLAEVH

>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 3 VNSLAEVH 10
VN+L EVH
Sbjct: 1887 VNTLEEVH 1894




72|Sequence|356|365|LAEVHRLYVG

>sp|VP2_AHSV3|OUTER capsid protein VP2|African horse sickness virus 3

Query: 3 EVHRLY 8
EVHRLY
Sbjct: 574 EVHRLY 579


>sp|Y085_OSHVF|UNCHARACTERIZED protein ORF85|Ostreid herpesvirus 1 (isolate France)

Query: 1 LAEVHRLY 8
L+E+HR Y
Sbjct: 163 LSEIHRTY 170


>sp|ENV_JEMBR|ENVELOPE glycoprotein|Jembrana disease virus (JDV)

Query: 1 LAEVHRLYVG 10
LAEVH + G
Sbjct: 499 LAEVHEVQTG 508


>sp|NCAP_UUKS|NUCLEOPROTEIN virus (strain S23) (UUKV)

Query: 1 LAEVHRLYV 9
L + HRLY+
Sbjct: 174 LVDAHRLYL 182




73|Sequence|361|370|RLYVGGPPLE

>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2701 RLYVGGP 2707


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2701 RLYVGGP 2707


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2701 RLYVGGP 2707


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2683 RLYVGGP 2689


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2687 RLYVGGP 2693


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2678 RLYVGGP 2684


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2676 RLYVGGP 2682


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2686 RLYVGGP 2692


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2690 RLYVGGP 2696


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2705 RLYVGGP 2711


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2701 RLYVGGP 2707


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 RLYVGGP 7
RLY+GGP
Sbjct: 2678 RLYIGGP 2684


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 RLYVGGP 7
RLY+GGP
Sbjct: 2678 RLYIGGP 2684


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 RLYVGGP 7
RLY+GGP
Sbjct: 2678 RLYIGGP 2684


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2679 RLYVGGP 2685


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 RLYVGGP 7
RLY+GGP
Sbjct: 2678 RLYIGGP 2684


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 RLYVGGP 7
RLY+GGP
Sbjct: 2678 RLYIGGP 2684


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2679 RLYVGGP 2685


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2701 RLYVGGP 2707


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 RLYVGGP 7
RLYVGGP
Sbjct: 2679 RLYVGGP 2685


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 RLYVGGP 7
RLY+GGP
Sbjct: 2678 RLYIGGP 2684


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 RLYVGGP 7
RLY+GGP
Sbjct: 2679 RLYIGGP 2685


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1 RLYVGGP 7
RLY+GGP
Sbjct: 2684 RLYIGGP 2690


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1 RLYVGGP 7
RLY+GGP
Sbjct: 2691 RLYIGGP 2697


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 RLYVGGP 7
RLY+GGP
Sbjct: 2679 RLYIGGP 2685


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1 RLYVGGP 7
RLY GGP
Sbjct: 2687 RLYCGGP 2693


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 RLYVGGP 7
RLY GGP
Sbjct: 2689 RLYCGGP 2695


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1 RLYVGGP 7
RLY GGP
Sbjct: 2681 RLYCGGP 2687


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 RLYVGGP 7
RLY GGP
Sbjct: 2689 RLYCGGP 2695


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 RLYVGGP 7
RLY GGP
Sbjct: 2682 RLYCGGP 2688


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1 RLYVGGP 7
RLY GGP
Sbjct: 2687 RLYCGGP 2693


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 RLYVGGP 7
RLY GGP
Sbjct: 2682 RLYCGGP 2688


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 2 LYVGGPP 8
LY+ GPP
Sbjct: 800 LYIYGPP 806


>sp|TGB2_BSMV|MOVEMENT protein TGB2|Barley stripe mosaic virus (BSMV)

Query: 1 RLYVGGPPL 9
R Y G PPL
Sbjct: 174 RSYCGHPPL 182




74|Sequence|366|375|GPPLEKEPRE

>sp|SPIK1_ADEG1|FIBER protein 1|Fowl adenovirus A serotype 1

Query: 2 PPLEKEPR 9
PP++K+PR
Sbjct: 574 PPMDKDPR 581


>sp|CVC1_ALHV1|CAPSID vertex component 1|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 PPLEKEPRE 10
PP+E PRE
Sbjct: 137 PPVELPPRE 145


>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39

Query: 2 PPLEKEPRE 10
PP K PR+
Sbjct: 243 PPSRKRPRQ 251


>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 1 GPPLEKEPRE 10
GPP + P+E
Sbjct: 1811 GPPQQASPQE 1820


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 1 GPPLEKEPRE 10
G P EK P E
Sbjct: 1429 GQPFEKFPEE 1438


>sp|Y057_NPVAC|UNCHARACTERIZED 19.0 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 2 PPLEKEPR 9
PP+E +P+
Sbjct: 139 PPIESDPK 146


>sp|LTP_MHV68|LARGE tegument protein deneddylase|Murid herpesvirus 4 (MuHV-4) (Murine

Query: 2 PPLEKEPRE 10
P LEK P+E
Sbjct: 2010 PALEKSPQE 2018


>sp|IAP1_OSHVF|PUTATIVE apoptosis inhibitor ORF42|Ostreid herpesvirus 1 (isolate France)

Query: 2 PPLEKEPR 9
PP+ K+P+
Sbjct: 121 PPMSKDPK 128




75|Sequence|371|380|KEPRELFVKG

>sp|RDRP_LVX|RNA replication protein|Lily virus X

Query: 1 KEPRELF 7
KEPR+LF
Sbjct: 92 KEPRKLF 98


>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1

Query: 2 EPRELFVK 9
E RELF+K
Sbjct: 668 EARELFIK 675


>sp|RBP5_BPT5|RECEPTOR-BINDING protein pb5|Escherichia phage T5 (Enterobacteria phage

Query: 3 PRELFVKG 10
PRE +KG
Sbjct: 341 PREFIIKG 348


>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13

Query: 3 PRELFVKG 10
P EL+VKG
Sbjct: 269 PAELYVKG 276


>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70

Query: 3 PRELFVKG 10
P EL++KG
Sbjct: 270 PSELYIKG 277


>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180

Query: 3 PRELFVKG 10
P EL++KG
Sbjct: 272 PTELYIKG 279


>sp|VF205_IIV3|PUTATIVE DNA ligase 052L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 KEPRELFVK 9
+EPRE+ VK
Sbjct: 427 EEPREITVK 435




76|Sequence|376|385|LFVKGTMKDI

>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 2 FVKGTMKDI 10
FVKG +KDI
Sbjct: 819 FVKGVVKDI 827


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 2 FVKGTMKDI 10
FVKG +KDI
Sbjct: 819 FVKGVVKDI 827


>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 2 FVKGTMKDI 10
FVKG +D+
Sbjct: 990 FVKGVTRDV 998


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 2 FVKGTMKDI 10
FVKG +D+
Sbjct: 990 FVKGVTRDV 998




77|Sequence|381|390|TMKDIRENFQ

>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 TMKDIRENFQ 10
T++DI ENF+
Sbjct: 1311 TVQDILENFR 1320


>sp|SPIKE_CVPRM|SPIKE glycoprotein|Porcine respiratory coronavirus (strain RM4)

Query: 1 TMKDIRENFQ 10
T++DI ENF+
Sbjct: 1089 TVQDILENFR 1098


>sp|SPIKE_CVPR8|SPIKE glycoprotein|Porcine respiratory coronavirus (strain 86/137004

Query: 1 TMKDIRENFQ 10
T++DI ENF+
Sbjct: 1089 TVQDILENFR 1098


>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 TMKDIRENFQ 10
T++DI ENF+
Sbjct: 1311 TVQDILENFR 1320


>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 TMKDIRENFQ 10
T++DI ENF+
Sbjct: 1313 TVQDILENFR 1322


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 TMKDIRENFQ 10
T++DI ENF+
Sbjct: 1313 TVQDILENFR 1322


>sp|SPIKE_CVCBG|SPIKE glycoprotein|Canine coronavirus (strain BGF10) (CCoV)

Query: 1 TMKDIRENFQ 10
T++DI ENF+
Sbjct: 1317 TVQDILENFR 1326


>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)

Query: 1 TMKDIRENFQ 10
T++DI ENF+
Sbjct: 1317 TVQDILENFR 1326


>sp|SPIKE_CVCAI|SPIKE glycoprotein|Canine coronavirus (strain Insavc-1) (CCoV)

Query: 1 TMKDIRENFQ 10
T++DI ENF+
Sbjct: 1315 TVQDILENFR 1324


>sp|RP147_FOWPN|DNA-DIRECTED RNA polymerase 147 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 1 TMKDIRENF 9
+KD+REN+
Sbjct: 867 VIKDVRENY 875


>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 MKDIRENFQ 10
+K+IR+N+Q
Sbjct: 3 VKEIRKNYQ 11


>sp|NS1_AADNV|INITIATOR protein NS1|Aedes albopictus densovirus (isolate Boublik/1994)

Query: 1 TMKDIRENF 9
T +DIRE+F
Sbjct: 94 TERDIREDF 102




78|Sequence|386|395|RENFQDLMQY

>sp|P32_MCMVK|UNCHARACTERIZED protein p32|Maize chlorotic mottle virus (isolate

Query: 2 ENFQDLMQY 10
ENF DL++Y
Sbjct: 75 ENFPDLVRY 83


>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 189 KDLQDLLQY 197


>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 183 KDLQDLLQY 191


>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 183 KDLQDLLQY 191


>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 183 KDLQDLLQY 191


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 189 KDLQDLLQY 197


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 183 KDLQDLLQY 191


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 183 KDLQDLLQY 191


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 183 KDLQDLLQY 191


>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 183 KDLQDLLQY 191


>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 183 KDLQDLLQY 191


>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 189 KDLQDLLQY 197


>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 183 KDLQDLLQY 191


>sp|YL294_MIMIV|UNCHARACTERIZED protein L294|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 NFQDLMQY 10
NFQ+ MQY
Sbjct: 74 NFQEFMQY 81


>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2 ENFQDLMQY 10
++ QDL+QY
Sbjct: 183 KDLQDLLQY 191


>sp|GSTG_BPT2|BETA-GLUCOSYL-HMC-ALPHA-GLUCOSYL-TRANSFERASE phage T2 (Bacteriophage T2)

Query: 1 RENFQDLMQY 10
RE F +L+QY
Sbjct: 106 REQFYELIQY 115


>sp|VG55_BPMD2|GENE 55 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 RENFQDL 7
RENF+D+
Sbjct: 25 RENFKDI 31




79|Sequence|391|400|DLMQYCAQDV

>sp|EXO74_BPE32|3'-5' exonuclease gp74|Escherichia phage Phieco32 (Escherichia coli

Query: 1 DLMQYCAQDV 10
D+ YC QDV
Sbjct: 148 DMFTYCEQDV 157


>sp|LTP_MHV68|LARGE tegument protein deneddylase|Murid herpesvirus 4 (MuHV-4) (Murine

Query: 1 DLMQYCAQD 9
+L Q+C+QD
Sbjct: 1923 NLQQFCSQD 1931


>sp|DPOL_ADEG1|DNA polymerase|Fowl adenovirus A serotype 1

Query: 3 MQYCAQDV 10
++YC QDV
Sbjct: 378 LEYCMQDV 385


>sp|DPOL_ADEB2|DNA polymerase|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus

Query: 3 MQYCAQDV 10
+ YC QDV
Sbjct: 403 LHYCVQDV 410


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 2 LMQYCAQ 8
L+QYC Q
Sbjct: 243 LLQYCKQ 249




80|Sequence|396|405|CAQDVWATHE

>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 CAQDVWA 7
CA D+WA
Sbjct: 486 CASDMWA 492


>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 AQDVWATH 9
A +VWATH
Sbjct: 64 AHNVWATH 71


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2 AQDVWAT 8
AQD+W T
Sbjct: 241 AQDIWGT 247


>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 AQDVWATH 9
A +VWATH
Sbjct: 70 AHNVWATH 77


>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 AQDVWATH 9
A +VWATH
Sbjct: 64 AHNVWATH 71


>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 AQDVWATH 9
A +VWATH
Sbjct: 64 AHNVWATH 71


>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 AQDVWATH 9
A +VWATH
Sbjct: 66 AHNVWATH 73


>sp|MB43_GAHVM|MEMBRANE protein UL43 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 QDVWATHE 10
QDV ATHE
Sbjct: 259 QDVNATHE 266


>sp|EXLYS_BPT7|PEPTIDOGLYCAN transglycosylase gp16|Escherichia phage T7 (Bacteriophage T7)

Query: 2 AQDVWATH 9
A+D W TH
Sbjct: 207 AKDFWETH 214


>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 AQDVWATH 9
A ++WATH
Sbjct: 64 AHNIWATH 71


>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 AQDVWATH 9
A ++WATH
Sbjct: 64 AHNIWATH 71


>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 AQDVWATH 9
A ++WATH
Sbjct: 64 AHNIWATH 71


>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 AQDVWATH 9
A ++WATH
Sbjct: 64 AHNIWATH 71


>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 AQDVWATH 9
A ++WATH
Sbjct: 64 AHNIWATH 71


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 1 CAQDVWAT 8
C +DVW T
Sbjct: 1254 CYRDVWET 1261


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 CAQDVWAT 8
C +DVW T
Sbjct: 1254 CYRDVWET 1261


>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 AQDVWATH 9
A VWATH
Sbjct: 64 AHKVWATH 71


>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 66 HNVWATH 72


>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 2 AQDVWATH 9
+ +VWATH
Sbjct: 64 SHNVWATH 71


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 62 HNVWATH 68


>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 62 HNVWATH 68


>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 62 HNVWATH 68


>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 62 HNVWATH 68


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 66 HNVWATH 72


>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 66 HNVWATH 72


>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 66 HNVWATH 72


>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 66 HNVWATH 72


>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 66 HNVWATH 72


>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 66 HNVWATH 72


>sp|UL32_EHV1B|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 CAQDVWATHE 10
C ++ WA+H
Sbjct: 378 CVEEYWASHR 387


>sp|UL32_EHV1A|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain AB1)

Query: 1 CAQDVWATHE 10
C ++ WA+H
Sbjct: 378 CVEEYWASHR 387


>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
+VWATH
Sbjct: 65 HNVWATH 71


>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
++WATH
Sbjct: 65 HNIWATH 71


>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 QDVWATH 9
++WATH
Sbjct: 65 HNIWATH 71




81|Sequence|401|410|WATHEVFQQQ

>sp|ORFC_ELHVK|PROTEIN ORF C|Elephantid herpesvirus 1 (isolate Asian

Query: 2 ATHEVFQQQ 10
AT +VF+QQ
Sbjct: 250 ATRQVFEQQ 258


>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain

Query: 1 WATHEVFQQ 9
WA HEV +
Sbjct: 449 WAPHEVLSR 457


>sp|HEPA_GAHVM|DNA helicase/primase complex-associated protein|Gallid herpesvirus 2

Query: 3 THEVFQQ 9
THEVF++
Sbjct: 640 THEVFEE 646


>sp|POLG_MRFVC|GENOME polyprotein|Maize rayado fino virus (isolate

Query: 1 WATHEVF 7
WA+H V+
Sbjct: 1736 WASHSVY 1742


>sp|POLG_TAMV|GENOME polyprotein|Tamarillo mosaic virus

Query: 2 ATHEVFQ 8
ATHE FQ
Sbjct: 97 ATHEQFQ 103


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 2 ATHEVFQ 8
ATHE FQ
Sbjct: 2877 ATHEQFQ 2883




82|Sequence|406|415|VFQQQLPLFL

>sp|GLYC_TACVF|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain Franze-Fernandez)

Query: 2 FQQQLPLFL 10
F Q++P+FL
Sbjct: 7 FMQEIPIFL 15


>sp|GLYC_TACVT|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain TRVL 11598)

Query: 2 FQQQLPLFL 10
F Q++P+FL
Sbjct: 7 FMQEIPIFL 15


>sp|GLYC_TACV5|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain V5) (TCRV)

Query: 2 FQQQLPLFL 10
F Q++P+FL
Sbjct: 7 FMQEIPIFL 15


>sp|GLYC_TACV7|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain V7) (TCRV)

Query: 2 FQQQLPLFL 10
F Q++P+FL
Sbjct: 7 FMQEIPIFL 15


>sp|YL360_MIMIV|UNCHARACTERIZED protein L360|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VFQQQLPLF 9
VF+Q LP F
Sbjct: 75 VFEQLLPYF 83


>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn

Query: 2 FQQQLPLFL 10
F Q++P FL
Sbjct: 7 FMQEIPTFL 15




83|Sequence|411|420|LPLFLERCPH

>sp|YL676_MIMIV|UNCHARACTERIZED protein L676|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 LFLERCPH 10
LFL+ CPH
Sbjct: 97 LFLKYCPH 104


>sp|VF165_ASFWA|UNCHARACTERIZED protein F165R|African swine fever virus (isolate

Query: 2 PLFLERCPH 10
P+F++ CP+
Sbjct: 91 PMFVDHCPN 99


>sp|VF165_ASFP4|UNCHARACTERIZED protein F165R|African swine fever virus (isolate

Query: 2 PLFLERCPH 10
P+F++ CP+
Sbjct: 91 PMFVDHCPN 99


>sp|VF165_ASFM2|UNCHARACTERIZED protein F165R|African swine fever virus (isolate

Query: 2 PLFLERCPH 10
P+F++ CP+
Sbjct: 91 PMFVDHCPN 99


>sp|VF165_ASFK5|UNCHARACTERIZED protein F165R|African swine fever virus (isolate

Query: 2 PLFLERCPH 10
P+F++ CP+
Sbjct: 91 PMFVDHCPN 99


>sp|VF165_ASFB7|UNCHARACTERIZED protein F165R|African swine fever virus (strain

Query: 2 PLFLERCPH 10
P+F++ CP+
Sbjct: 91 PMFVDHCPN 99


>sp|ENV_FIVWO|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate Wo)

Query: 3 LFLERCPH 10
LF+ CPH
Sbjct: 102 LFIGYCPH 109


>sp|VF143_IIV3|PUTATIVE kinase protein 029R|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 LFLERCP 9
+ LERCP
Sbjct: 75 VILERCP 81


>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain

Query: 1 LPLFLERCPH 10
LP FLE H
Sbjct: 84 LPFFLEYAKH 93


>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 LPLFLERCPH 10
LP FLE H
Sbjct: 86 LPFFLEYAKH 95


>sp|UL49_SHV21|UNCHARACTERIZED gene 66 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 PLFLERC 8
P FL+RC
Sbjct: 63 PYFLDRC 69




84|Sequence|416|425|ERCPHPVTLA

>sp|ENV_BIV29|ENVELOPE glycoprotein|Bovine immunodeficiency virus (strain R29)

Query: 3 CPHPVTL 9
C HP+TL
Sbjct: 445 CMHPITL 451


>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate

Query: 2 RCPHPVTLA 10
RCP +TL+
Sbjct: 988 RCPQDITLS 996


>sp|38K_NPVAC|UNCHARACTERIZED 38.0 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 1 ERCPHPV 7
+RCP PV
Sbjct: 291 KRCPTPV 297


>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12

Query: 2 RCPHP 6
+CPHP
Sbjct: 23 KCPHP 27


>sp|YL676_MIMIV|UNCHARACTERIZED protein L676|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 CPHP 6
CPHP
Sbjct: 102 CPHP 105


>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 3 CPHP 6
CPHP
Sbjct: 697 CPHP 700


>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 3 CPHP 6
CPHP
Sbjct: 697 CPHP 700


>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 3 CPHP 6
CPHP
Sbjct: 697 CPHP 700


>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 3 CPHP 6
CPHP
Sbjct: 697 CPHP 700


>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 3 CPHP 6
CPHP
Sbjct: 697 CPHP 700


>sp|V222_FOWPN|PUTATIVE ankyrin repeat protein FPV222|Fowlpox virus (strain NVSL) (FPV)

Query: 1 ERCPHPVTLA 10
E C PVTLA
Sbjct: 293 EPCTVPVTLA 302


>sp|VG48_ALHV1|UNCHARACTERIZED gene 48 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 CPHPV 7
CPHP+
Sbjct: 349 CPHPI 353


>sp|RDRP_CMVAS|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain As)

Query: 1 ERCPHPV 7
E+CP PV
Sbjct: 258 EKCPTPV 264


>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 1 ERCPHPVTL 9
+RCP P+ +
Sbjct: 747 QRCPLPIIM 755


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 1 ERCPHPVTL 9
E+ PH +TL
Sbjct: 806 EKSPHSITL 814


>sp|CAPSD_GLVWB|MAJOR capsid protein|Giardia lamblia virus (isolate Wang)

Query: 1 ERCPHPVTL 9
+RCP P+ +
Sbjct: 747 QRCPLPIIM 755


>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 ERCPHPVTL 9
+RC PVTL
Sbjct: 250 KRCVEPVTL 258


>sp|VCP_VACCW|COMPLEMENT control protein C3|Vaccinia virus (strain Western Reserve)

Query: 2 RCPHP 6
+CPHP
Sbjct: 205 KCPHP 209


>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 RCPHP 6
+CPHP
Sbjct: 205 KCPHP 209


>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 ERCPHPVTL 9
+RC PVTL
Sbjct: 265 KRCVEPVTL 273


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1 ERCPHPVTL 9
E+ PH +TL
Sbjct: 806 EKSPHSITL 814


>sp|VE6_HPV53|PROTEIN E6|Human papillomavirus type 53

Query: 2 RCPHPVT 8
RC HP+T
Sbjct: 109 RCQHPLT 115


>sp|GK_SUHVK|ENVELOPE glycoprotein K|Suid herpesvirus 1 (strain Kaplan)

Query: 2 RCPHPVTLA 10
R PHPV A
Sbjct: 31 RLPHPVVYA 39


>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 3 CPHP 6
CPHP
Sbjct: 536 CPHP 539


>sp|VNUA_SUHVK|PROBABLE nuclear antigen|Suid herpesvirus 1 (strain Kaplan)

Query: 1 ERCPHPVTL 9
ER P PV L
Sbjct: 874 ERAPEPVVL 882


>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3

Query: 3 CPHPV 7
CPHP+
Sbjct: 289 CPHPI 293




85|Sequence|421|430|PVTLAGMLEM

>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1 PVTLAGMLEM 10
PVT+AG++ +
Sbjct: 1654 PVTMAGLINL 1663


>sp|MCP_IRV22|MAJOR capsid protein|Simulium iridescent virus (IIV-22) (Insect

Query: 1 PVTLAGML 8
PVTL+G+L
Sbjct: 87 PVTLSGLL 94


>sp|MCP_IRV1|MAJOR capsid protein|Tipula iridescent virus (TIV) (Insect

Query: 1 PVTLAGML 8
PVTL+G+L
Sbjct: 87 PVTLSGLL 94


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 1 PVTLAGMLEM 10
P+T+AG++ +
Sbjct: 1653 PITMAGLINL 1662




86|Sequence|426|435|GMLEMGVSYL

>sp|ENV_BIV29|ENVELOPE glycoprotein|Bovine immunodeficiency virus (strain R29)

Query: 1 GMLEMGVSYL 10
GML MGV L
Sbjct: 52 GMLSMGVGML 61


>sp|VG37_MILVL|UNCHARACTERIZED 37 kDa protein|Mirafiori lettuce virus (isolate

Query: 3 LEMGVSYL 10
LE G+SYL
Sbjct: 156 LEQGLSYL 163




87|Sequence|431|440|GVSYLPVNQN

>sp|RDRP_TYYVF|PROTEIN P1-P2|Turnip yellows virus (isolate FL-1)

Query: 3 SYLPVNQN 10
SYLP+NQ+
Sbjct: 31 SYLPLNQS 38


>sp|P1_TYYVF|PROTEIN P1|Turnip yellows virus (isolate FL-1)

Query: 3 SYLPVNQN 10
SYLP+NQ+
Sbjct: 31 SYLPLNQS 38


>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)

Query: 2 VSYLPVN 8
VSYLP+N
Sbjct: 40 VSYLPLN 46


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 GVSYLPVNQN 10
GVS LPV Q+
Sbjct: 1299 GVSLLPVCQS 1308


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 GVSYLPVNQN 10
GVS LPV Q+
Sbjct: 1299 GVSLLPVCQS 1308


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 GVSYLPVNQN 10
GVS LPV Q+
Sbjct: 1299 GVSLLPVCQS 1308


>sp|CAPSD_MISV9|CAPSID protein|Miscanthus streak virus (isolate 91)

Query: 1 GVSYLPVN 8
GV Y PVN
Sbjct: 177 GVEYAPVN 184


>sp|GAG_SRV1|GAG polyprotein|Simian retrovirus SRV-1

Query: 1 GVSYLPVNQN 10
VS++P N+N
Sbjct: 624 AVSFVPANKN 633


>sp|GAG_MPMV|GAG polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 1 GVSYLPVNQN 10
VS++P N+N
Sbjct: 623 AVSFVPANKN 632


>sp|HUB10_BPP22|TAIL hub protein gp10|Salmonella phage P22 (Bacteriophage P22)

Query: 2 VSYLPVN 8
+ YLPVN
Sbjct: 22 IDYLPVN 28


>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)

Query: 3 SYLPVNQN 10
+Y+P+N N
Sbjct: 319 AYVPINDN 326


>sp|GAG_SRV2|GAG polyprotein|Simian retrovirus SRV-2

Query: 1 GVSYLPVNQN 10
VS++P N N
Sbjct: 620 AVSFVPANSN 629




88|Sequence|436|445|PVNQNWERYL

>sp|AC18_NPVAC|PROTEIN AC18|Autographa californica nuclear polyhedrosis virus

Query: 3 NQNWERYL 10
+QNW+R++
Sbjct: 339 DQNWKRFM 346


>sp|RDRP_MYRV9|RNA-DIRECTED RNA polymerase VP1|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 1 PVNQNWERY 9
PV +W RY
Sbjct: 1071 PVVDDWSRY 1079


>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)

Query: 1 PVNQNWERYL 10
PV QN RYL
Sbjct: 331 PVQQNHIRYL 340


>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P

Query: 2 VNQNWERYL 10
++Q W+R+L
Sbjct: 3 LDQRWDRFL 11


>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 6 WERYL 10
WERYL
Sbjct: 456 WERYL 460


>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 6 WERYL 10
WERYL
Sbjct: 456 WERYL 460


>sp|RDRP_PEMVW|PROTEIN P1-P2|Pea enation mosaic virus-1 (strain

Query: 5 NWERYL 10
NW RYL
Sbjct: 976 NWSRYL 981


>sp|SCAF_ALHV1|CAPSID scaffolding protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 QNWERYL 10
Q W RYL
Sbjct: 29 QTWSRYL 35


>sp|ORF4A_MERS1|NON-STRUCTURAL protein ORF4a|Middle East respiratory syndrome-related

Query: 2 VNQNWERYL 10
+NQ W++YL
Sbjct: 7 LNQIWQKYL 15


>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)

Query: 3 NQNWERYL 10
NQ+WE L
Sbjct: 1005 NQHWEHLL 1012


>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus

Query: 1 PVNQNW 6
P+N NW
Sbjct: 1598 PINPNW 1603


>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)

Query: 2 VNQNWERYL 10
+N W+R+L
Sbjct: 109 INAEWQRHL 117


>sp|VG41_SHV21|UNCHARACTERIZED gene 41 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 PVNQNWERYL 10
P+N N+E Y+
Sbjct: 119 PLNINYEEYI 128


>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973

Query: 4 QNWERY 9
NWE+Y
Sbjct: 535 HNWEKY 540




89|Sequence|441|450|WERYLAEAQG

>sp|RDRP_CLBVS|RNA replication polyprotein|Citrus leaf blotch virus (isolate

Query: 1 WERYLAEAQG 10
W RYL+E G
Sbjct: 1010 WSRYLSEGNG 1019


>sp|VG66_ICHVA|UNCHARACTERIZED protein ORF66|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 WERYLAEAQG 10
WER+ A A+G
Sbjct: 297 WERFSAAAKG 306


>sp|GLYCO_KHUV|GLYCOPROTEIN virus (KHUV)

Query: 1 WERYLAEAQG 10
WE Y EA+G
Sbjct: 513 WESYKVEAEG 522


>sp|RDRP_BPSP|RNA-DIRECTED RNA polymerase subunit beta|Enterobacteria phage SP (Bacteriophage

Query: 1 WERYLAEAQG 10
WE++LA +G
Sbjct: 91 WEKFLAAEEG 100


>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 4 YLAEAQG 10
YLAEAQG
Sbjct: 981 YLAEAQG 987


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 WERYLAEA 8
WE+ +AEA
Sbjct: 1481 WEKKIAEA 1488


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 4 YLAEAQG 10
YLA+AQG
Sbjct: 1117 YLADAQG 1123


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 4 YLAEAQG 10
YLA+AQG
Sbjct: 1112 YLADAQG 1118


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 4 YLAEAQG 10
YLA+AQG
Sbjct: 1117 YLADAQG 1123


>sp|CHMA_BP201|CHIMALLIN phage 201phi2-1 (Pseudomonas chlororaphis

Query: 2 ERYLAEA 8
+RYLAEA
Sbjct: 568 DRYLAEA 574


>sp|YL567_MIMIV|UNCHARACTERIZED protein L567|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WERYLAE 7
W+RYL E
Sbjct: 98 WKRYLTE 104




90|Sequence|446|455|AEAQGTYEEL

>sp|GLYCO_ARV|GLYCOPROTEIN River virus (ARV)

Query: 5 GTYEEL 10
GTYEEL
Sbjct: 650 GTYEEL 655


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2 EAQGTYEE 9
E+QGT+E+
Sbjct: 2748 ESQGTHED 2755


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2 EAQGTYEE 9
E+QGT+E+
Sbjct: 2748 ESQGTHED 2755


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 AEAQGTYEEL 10
A+ QG +EEL
Sbjct: 1244 AQGQGDHEEL 1253




91|Sequence|451|460|TYEELQREMK

>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 1 TYEELQREMK 10
T EELQ+EM+
Sbjct: 3160 TIEELQQEME 3169


>sp|VF198_IIV6|UNCHARACTERIZED protein 198R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 TYEELQRE 8
TY LQRE
Sbjct: 325 TYSSLQRE 332


>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean

Query: 1 TYEELQREM 9
T EELQRE+
Sbjct: 3 TMEELQREI 11


>sp|YR255_MIMIV|UNCHARACTERIZED protein R255|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 TYEELQREMK 10
TY+ LQ +MK
Sbjct: 219 TYDSLQAKMK 228


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 1 TYEELQREMK 10
TYEELQ+ K
Sbjct: 383 TYEELQKAPK 392


>sp|ACB1_BPS16|ANTI-CBASS protein Acb1|Salmonella phage S16 (Salmonella phage

Query: 3 EELQREMK 10
E LQRE+K
Sbjct: 26 ENLQRELK 33


>sp|VF378_IIV6|UNCHARACTERIZED protein 378R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 TYEELQREM 9
TY+EL+RE
Sbjct: 28 TYKELEREC 36


>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo

Query: 1 TYEELQREM 9
T EE+QRE+
Sbjct: 3 TMEEIQREI 11




92|Sequence|456|465|QREMKKSLMD

>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 1 QREMKKSLMD 10
QRE+ KSL D
Sbjct: 291 QREISKSLHD 300


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 1 QREMKKSLMD 10
QRE+ KSL D
Sbjct: 291 QREISKSLHD 300




93|Sequence|461|470|KSLMDLANDA

>sp|Y286B_AFV2P|UNCHARACTERIZED protein ORF286b|Acidianus filamentous virus 2 (isolate

Query: 1 KSLMDLAND 9
KSL DL ND
Sbjct: 231 KSLYDLYND 239


>sp|YO03_BPL2|UNCHARACTERIZED 37.2 kDa protein|Acholeplasma phage L2 (Bacteriophage L2)

Query: 1 KSLMDLAND 9
KSLMD+ +D
Sbjct: 31 KSLMDILSD 39




94|Sequence|466|475|LANDACQLLS

>sp|YR705_MIMIV|UNCHARACTERIZED protein R705|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 ANDACQLL 9
ANDA QLL
Sbjct: 136 ANDAAQLL 143


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 1 LANDACQLLS 10
++ND C LLS
Sbjct: 1457 VSNDLCYLLS 1466


>sp|Y077_OSHVF|UNCHARACTERIZED protein ORF77|Ostreid herpesvirus 1 (isolate France)

Query: 1 LANDACQLL 9
LAN C+LL
Sbjct: 1118 LANTECELL 1126


>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 LANDACQL 8
LAN+AC+L
Sbjct: 442 LANEACRL 449


>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)

Query: 1 LANDACQL 8
LAN+AC+L
Sbjct: 443 LANEACRL 450


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 3 NDACQLL 9
NDAC +L
Sbjct: 87 NDACNIL 93


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 1 LANDACQLLS 10
+ ND C LLS
Sbjct: 1458 VVNDLCYLLS 1467


>sp|SPIKE_CVMA5|SPIKE glycoprotein|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 LANDACQLLS 10
L ND CQ+ +
Sbjct: 542 LVNDRCQIFA 551


>sp|SPIKE_CVM4|SPIKE glycoprotein|Murine coronavirus (strain 4) (MHV-4)

Query: 1 LANDACQLLS 10
L ND CQ+ +
Sbjct: 594 LVNDRCQIFA 603




95|Sequence|471|480|CQLLSGERYK

>sp|DAM_BPT1|DNA N-6-adenine-methyltransferase|Escherichia phage T1 (Bacteriophage

Query: 1 CQLLSGERYK 10
C+ +SG RYK
Sbjct: 38 CKEISGRRYK 47


>sp|Y109_NPVOP|UNCHARACTERIZED 44.3 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 CQLLSGER 8
C+LLSG R
Sbjct: 143 CKLLSGAR 150


>sp|DPOL_WHV6|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 CQLLSG 6
CQLLSG
Sbjct: 423 CQLLSG 428


>sp|DPOL_WHV5|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 CQLLSG 6
CQLLSG
Sbjct: 751 CQLLSG 756


>sp|DPOL_WHV3|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 CQLLSG 6
CQLLSG
Sbjct: 751 CQLLSG 756


>sp|DPOL_WHV2|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 CQLLSG 6
CQLLSG
Sbjct: 750 CQLLSG 755


>sp|DPOL_WHV1|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 CQLLSG 6
CQLLSG
Sbjct: 746 CQLLSG 751


>sp|NCAP_QRFVE|NUCLEOPROTEIN virus (isolate QrfV/Tick/Afghanistan/EG_T_377/1968) (QRFV)

Query: 1 CQLLSGERYK 10
CQ+ SG R +
Sbjct: 437 CQIFSGNRKR 446


>sp|GC_MEHVH|ENVELOPE glycoprotein C homolog|Meleagrid herpesvirus 1 (strain H2)

Query: 3 LLSGERYK 10
+LSGE YK
Sbjct: 260 VLSGENYK 267


>sp|GC_MEHVF|ENVELOPE glycoprotein C homolog|Meleagrid herpesvirus 1 (strain FC126)

Query: 3 LLSGERYK 10
+LSGE YK
Sbjct: 259 VLSGENYK 266


>sp|GC_GAHVR|ENVELOPE glycoprotein C homolog|Gallid herpesvirus 2 (strain RB-1b)

Query: 3 LLSGERYK 10
+LSGE YK
Sbjct: 268 VLSGENYK 275


>sp|GC_GAHVM|ENVELOPE glycoprotein C homolog|Gallid herpesvirus 2 (strain

Query: 3 LLSGERYK 10
+LSGE YK
Sbjct: 268 VLSGENYK 275


>sp|GC_GAHVG|ENVELOPE glycoprotein C homolog|Gallid herpesvirus 2 (strain GA)

Query: 3 LLSGERYK 10
+LSGE YK
Sbjct: 267 VLSGENYK 274


>sp|GC_GAHVB|ENVELOPE glycoprotein C homolog|Gallid herpesvirus 2 (strain bc-1)

Query: 3 LLSGERYK 10
+LSGE YK
Sbjct: 268 VLSGENYK 275


>sp|YL232_MIMIV|PUTATIVE serine/threonine-protein kinase L232|Acanthamoeba polyphaga

Query: 1 CQLLSGERY 9
C+L++ E+Y
Sbjct: 598 CRLITNEKY 606




96|Sequence|476|485|GERYKEDPWL

>sp|FIB11_BPE32|PROBABLE tail fiber protein|Escherichia phage Phieco32 (Escherichia coli

Query: 1 GERYKEDPWL 10
G ++EDPW+
Sbjct: 75 GALFREDPWV 84


>sp|POLG_MNV1|GENOME polyprotein|Norovirus (isolate Mouse/NoV/United

Query: 2 ERYKEDPWL 10
ER K DPWL
Sbjct: 89 ERKKSDPWL 97


>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain 17)

Query: 1 GERYKEDPWL 10
G +EDPWL
Sbjct: 157 GAGIREDPWL 166


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 GERYKEDPW 9
G R+++ PW
Sbjct: 154 GNRFRDAPW 162


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 GERYKEDPW 9
G R+++ PW
Sbjct: 154 GNRFRDAPW 162


>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain

Query: 5 KEDPWL 10
+EDPWL
Sbjct: 159 REDPWL 164


>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)

Query: 3 RYKEDPW 9
RY DPW
Sbjct: 381 RYDGDPW 387


>sp|GAG_CAEVC|GAG polyprotein|Caprine arthritis encephalitis virus (strain

Query: 2 ERYKEDPW 9
E +KE+PW
Sbjct: 51 EDHKEEPW 58


>sp|RDRP_SHMV|REPLICASE large subunit|Sunn-hemp mosaic virus (SHMV) (TMV

Query: 2 ERYKEDP 8
+RY EDP
Sbjct: 179 DRYNEDP 185


>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P

Query: 1 GERYKEDPW 9
GE + DPW
Sbjct: 169 GEEKRGDPW 177


>sp|TGB2_LSV|MOVEMENT protein TGB2|Lily symptomless virus (LSV)

Query: 1 GERYKEDPWL 10
G R+ PWL
Sbjct: 71 GSRWTFQPWL 80


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 5 KEDPW 9
K+DPW
Sbjct: 1052 KDDPW 1056


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 5 KEDPW 9
K+DPW
Sbjct: 1052 KDDPW 1056


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 2 ERYKEDPWL 10
E Y ED W
Sbjct: 758 ENYTEDVWF 766


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 ERYKEDPWL 10
E Y ED W
Sbjct: 758 ENYTEDVWF 766


>sp|VNS3_AHSV4|NON-STRUCTURAL protein NS3|African horse sickness virus 4

Query: 2 ERYKEDPWL 10
E YK++ WL
Sbjct: 143 EDYKKNDWL 151


>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)

Query: 1 GERYKEDPWL 10
G Y+E PW+
Sbjct: 621 GRVYEEIPWM 630


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 2 ERYKEDPW 9
+ YK +PW
Sbjct: 440 DHYKSNPW 447


>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)

Query: 1 GERYKEDPWL 10
G Y+E PW+
Sbjct: 619 GRVYEEIPWM 628


>sp|REP1_FBNC1|PARA-REP C1|Faba bean necrotic yellows C1

Query: 2 ERYKEDP 8
ERY EDP
Sbjct: 107 ERYLEDP 113


>sp|VP2_BTV17|OUTER capsid protein VP2|Bluetongue virus 17 (isolate USA)

Query: 1 GERYKEDPW 9
G K+DPW
Sbjct: 534 GTSKKDDPW 542




97|Sequence|481|490|EDPWLWDLEW

>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 1 EDPWLWDLEW 10
E+ W W LEW
Sbjct: 501 EELWRWSLEW 510


>sp|YR350_MIMIV|PUTATIVE ATP-dependent RNA helicase R350|Acanthamoeba polyphaga mimivirus

Query: 2 DPWLWDL-EW 10
DPW+ DL EW
Sbjct: 143 DPWMQDLKEW 152


>sp|POL_SOCMV|ENZYMATIC polyprotein|Soybean chlorotic mottle virus

Query: 1 EDPWLWD 7
++PW WD
Sbjct: 473 KNPWKWD 479


>sp|PG129_VACCW|MAJOR core protein OPG129|Vaccinia virus (strain Western Reserve)

Query: 3 PWLWDL 8
PW++DL
Sbjct: 541 PWMYDL 546


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 2 DPWLWDLE 9
D +LWD E
Sbjct: 2208 DGYLWDFE 2215


>sp|MATRX_NIPAV|MATRIX protein|Nipah virus

Query: 2 DPWLWDLEW 10
+PWL L W
Sbjct: 306 NPWLNRLTW 314


>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2 DPWLWDLEW 10
+PWL L W
Sbjct: 306 NPWLNRLTW 314


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 1 EDPWLWD 7
E+P LWD
Sbjct: 423 EEPVLWD 429


>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain

Query: 1 EDPWL 5
EDPWL
Sbjct: 160 EDPWL 164


>sp|NTP1_RFVKA|NUCLEOSIDE triphosphatase I|Rabbit fibroma virus (strain Kasza)

Query: 1 EDPWLWDL 8
EDPW + +
Sbjct: 91 EDPWTYSI 98


>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain 17)

Query: 1 EDPWL 5
EDPWL
Sbjct: 162 EDPWL 166


>sp|VP03_EHV2|PROBABLE membrane antigen 3|Equine herpesvirus 2 (strain 86/87)

Query: 2 DPWLWD 7
+PW W+
Sbjct: 696 EPWTWE 701


>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)

Query: 3 PWLWDLE 9
PW++DLE
Sbjct: 674 PWVFDLE 680


>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)

Query: 3 PWLWDLE 9
PW++DLE
Sbjct: 674 PWVFDLE 680


>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann

Query: 3 PWLWDLE 9
PW++DLE
Sbjct: 674 PWVFDLE 680


>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann

Query: 3 PWLWDLE 9
PW++DLE
Sbjct: 674 PWVFDLE 680


>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)

Query: 3 PWLWDLE 9
PW++DLE
Sbjct: 673 PWVFDLE 679


>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 DPWLWDLEW 10
DP+ D EW
Sbjct: 296 DPFTMDTEW 304


>sp|RDRP_AQRVG|RNA-DIRECTED RNA polymerase VP2|Aquareovirus G (isolate American grass

Query: 4 WLWDLEW 10
W++D++W
Sbjct: 775 WVYDIDW 781


>sp|US16_HCMVA|UNCHARACTERIZED protein HVLF2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 PWLWDL 8
PW W L
Sbjct: 207 PWTWPL 212


>sp|US16_HCMVM|PROTEIN US16|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 PWLWDL 8
PW W L
Sbjct: 207 PWTWPL 212


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 4 WLWDLE 9
WLW+L+
Sbjct: 577 WLWNLQ 582


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 4 WLWDLE 9
WLW+L+
Sbjct: 577 WLWNLQ 582


>sp|HBEAG_ASHV|EXTERNAL core antigen|Arctic squirrel hepatitis virus (ASHV)

Query: 4 WLWDLE 9
WLWD++
Sbjct: 27 WLWDMD 32


>sp|UL95_ALHV1|GENE 34 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 PWLWDL 8
PW+W L
Sbjct: 164 PWMWLL 169


>sp|NCTSP_BPN4|NON-CONTRACTILE tail sheath|Enterobacteria phage N4 (Bacteriophage N4)

Query: 4 WLWDLE 9
W WDLE
Sbjct: 517 WWWDLE 522




98|Sequence|486|495|WDLEWDLQEF

>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 WDLEWDL 7
W L WDL
Sbjct: 427 WGLNWDL 433


>sp|DPOL1_BPK32|DEPOLYMERASE 1, capsule K3-specific|Klebsiella phage KP32 (Bacteriophage KP32)

Query: 1 WDLEWDLQEF 10
+++ WD+Q F
Sbjct: 515 YNMTWDMQFF 524


>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 1 WDLEWDL 7
W L WDL
Sbjct: 430 WGLNWDL 436


>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 1 WDLEWDL 7
W L WDL
Sbjct: 428 WGLNWDL 434


>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 WDLEWDL 7
W L WDL
Sbjct: 427 WGLNWDL 433


>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 WDLEWDL 7
W L WDL
Sbjct: 427 WGLNWDL 433


>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 WDLEWDL 7
W L WDL
Sbjct: 427 WGLNWDL 433


>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 WDLEWDL 7
W L WDL
Sbjct: 427 WGLNWDL 433


>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 WDLEWDL 7
W L WDL
Sbjct: 427 WGLNWDL 433


>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2

Query: 1 WDLEWDL 7
W L WDL
Sbjct: 423 WGLNWDL 429


>sp|TGB1_PVSP|MOVEMENT and silencing protein TGBp1|Potato virus S (strain Peruvian)

Query: 2 DLEWDLQ 8
DL WD+Q
Sbjct: 129 DLGWDVQ 135


>sp|Y023_OSHVF|UNCHARACTERIZED protein ORF23|Ostreid herpesvirus 1 (isolate France)

Query: 2 DLEWD 6
DLEWD
Sbjct: 1076 DLEWD 1080


>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 1 WDLEW 5
W LEW
Sbjct: 506 WSLEW 510


>sp|VE8E2_HPV54|PROTEIN E8^E2C|Human papillomavirus type 54

Query: 1 WDLEWDLQE 9
W L W +E
Sbjct: 6 WKLRWSTEE 14


>sp|DSAD1_BPSPB|DSR anti-defense 1|Bacillus phage SPbeta (Bacillus phage

Query: 1 WDLEWDL 7
WD+E+D+
Sbjct: 25 WDVEFDI 31


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 DLEWDLQE 9
DL+W ++E
Sbjct: 96 DLDWTIEE 103


>sp|TSP_BPP2|TAIL sheath protein|Escherichia phage P2 (Bacteriophage P2)

Query: 5 WDLQE 9
WDLQE
Sbjct: 245 WDLQE 249


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 2 DLEWDLQEF 10
DLE D+Q F
Sbjct: 1997 DLEEDIQHF 2005




99|Sequence|491|500|DLQEFKQKKA

>sp|YL089_MIMIV|PUTATIVE BTB/POZ domain-containing protein L89|Acanthamoeba polyphaga

Query: 1 DLQEFKQK 8
DLQEFK+K
Sbjct: 439 DLQEFKEK 446




100|Sequence|496|505|KQKKAKKVKK

***** No hits found ******


101|Sequence|501|510|KKVKKEPATA

>sp|DNBI_MUHVS|MAJOR DNA-binding protein|Murid herpesvirus 1 (strain Smith)

Query: 1 KKVKKEP 7
K++KKEP
Sbjct: 501 KQIKKEP 507


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 KKVKKEP 7
K VKKEP
Sbjct: 492 KNVKKEP 498


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 1 KKVKKEP 7
K VKKEP
Sbjct: 492 KNVKKEP 498




102|Sequence|506|515|EPATASKLPI

>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus (isolate

Query: 2 PATASKLPI 10
PAT KLPI
Sbjct: 1097 PATLEKLPI 1105


>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus (isolate

Query: 2 PATASKLPI 10
PAT KLPI
Sbjct: 1097 PATLEKLPI 1105


>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus (strain

Query: 2 PATASKLPI 10
PAT KLPI
Sbjct: 1097 PATLEKLPI 1105


>sp|VP1_RRSVT|STRUCTURAL protein VP1|Rice ragged stunt virus (isolate

Query: 1 EPATASKLP 9
EPA +KLP
Sbjct: 225 EPAKVTKLP 233


>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 2 PATASKLPI 10
PATAS +P+
Sbjct: 1553 PATASIMPV 1561




103|Sequence|511|520|SKLPIEGAGA

>sp|VG63_ICHVA|UNCHARACTERIZED protein ORF63|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 KLPIEGA 8
KLPI+GA
Sbjct: 70 KLPIDGA 76




104|Sequence|516|525|EGAGAPGDPM

>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate

Query: 3 AGAPGD 8
AGAPGD
Sbjct: 1702 AGAPGD 1707


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 4 GAPGDPM 10
G+PGDP+
Sbjct: 20 GSPGDPI 26


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 205 GAGKPGD 211


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 205 GAGKPGD 211


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 205 GAGKPGD 211


>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)

Query: 2 GAGAPGDPM 10
GAG PG P+
Sbjct: 406 GAGIPGGPV 414


>sp|VF198_IIV6|UNCHARACTERIZED protein 198R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 GAGAPGD 8
G G+PGD
Sbjct: 266 GTGSPGD 272


>sp|POLS_MIDDV|STRUCTURAL polyprotein|Middelburg virus

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 216 GAGKPGD 222


>sp|DPOL_TNAVC|DNA polymerase|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 3 AGAPGDPM 10
A PGDP+
Sbjct: 661 ASVPGDPV 668


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 206 GAGKPGD 212


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 206 GAGKPGD 212


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 206 GAGKPGD 212


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 206 GAGKPGD 212


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 212 GAGKPGD 218


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 212 GAGKPGD 218


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 EGAGAP 6
EGAGAP
Sbjct: 606 EGAGAP 611


>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 215 GAGKPGD 221


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 EGAGAP 6
EGAGAP
Sbjct: 606 EGAGAP 611


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 EGAGAP 6
EGAGAP
Sbjct: 606 EGAGAP 611


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 213 GAGKPGD 219


>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain

Query: 2 GAGAPGDPM 10
GAG PG P+
Sbjct: 406 GAGIPGGPV 414


>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 215 GAGKPGD 221


>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)

Query: 2 GAGAPGDPM 10
GAG PG P+
Sbjct: 406 GAGIPGGPV 414


>sp|NCAP_MUMPV|NUCLEOPROTEIN orthorubulavirus (MuV)

Query: 2 GAGAPGDPM 10
GAG PG P+
Sbjct: 406 GAGIPGGPV 414


>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain

Query: 2 GAGAPGDPM 10
GAG PG P+
Sbjct: 406 GAGIPGGPV 414


>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain

Query: 2 GAGAPGDPM 10
GAG PG P+
Sbjct: 406 GAGIPGGPV 414


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 2 GAGAPGD 8
GAG PGD
Sbjct: 213 GAGKPGD 219


>sp|NCAP_ALLVP|NUCLEOPROTEIN mammarenavirus (isolate Rat/Peru/CLHP-2472/1997) (ALLV)

Query: 4 GAPGDPM 10
G PGDP+
Sbjct: 383 GPPGDPV 389


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 2 GAGAPGD 8
G+G PGD
Sbjct: 198 GSGKPGD 204




105|Sequence|521|530|PGDPMDQEDL

>sp|H962R_ASFK5|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 1 PGDPMDQEDL 10
PG PM+Q ++
Sbjct: 448 PGQPMNQGEI 457


>sp|L_MOBVC|RNA-DIRECTED RNA polymerase L|Mobala mammarenavirus (isolate Rat/Central African

Query: 1 PGDPMDQEDL 10
P +P DQE+L
Sbjct: 738 PLEPADQEEL 747


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2 GDPMDQE 8
GDP DQE
Sbjct: 215 GDPRDQE 221


>sp|H962R_ASFM2|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 1 PGDPMDQEDL 10
PG PM+Q ++
Sbjct: 448 PGQPMNQGEI 457


>sp|H962R_ASFP4|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 1 PGDPMDQEDL 10
PG PM+Q ++
Sbjct: 448 PGQPMNQGEI 457


>sp|H962R_ASFWA|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 1 PGDPMDQEDL 10
PG PM+Q ++
Sbjct: 448 PGQPMNQGEI 457


>sp|ENV_SFVCP|ENVELOPE glycoprotein gp130|Simian foamy virus (isolate chimpanzee)

Query: 2 GDPMDQE 8
GDP DQE
Sbjct: 215 GDPRDQE 221


>sp|H962R_ASFB7|PUTATIVE primase C962R|African swine fever virus (strain

Query: 1 PGDPMDQEDL 10
PG PM+Q ++
Sbjct: 448 PGQPMNQGEI 457


>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943

Query: 1 PGDPMDQEDL 10
PGD +D E+L
Sbjct: 109 PGDFIDYEEL 118


>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto

Query: 1 PGDPMDQEDL 10
PGD +D E+L
Sbjct: 109 PGDFIDYEEL 118


>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933

Query: 1 PGDPMDQEDL 10
PGD +D E+L
Sbjct: 109 PGDFIDYEEL 118


>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930

Query: 1 PGDPMDQEDL 10
PGD +D E+L
Sbjct: 109 PGDFIDYEEL 118


>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig

Query: 1 PGDPMDQEDL 10
PGD +D E+L
Sbjct: 109 PGDFIDYEEL 118


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 3 DPMDQED 9
DPMDQ +
Sbjct: 2227 DPMDQRE 2233


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 3 DPMDQED 9
DPMDQ +
Sbjct: 2227 DPMDQRE 2233


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 2 GDPMDQE 8
GDP DQ+
Sbjct: 215 GDPRDQD 221


>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain

Query: 2 GDPMDQE 8
GDP DQ+
Sbjct: 48 GDPSDQQ 54


>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain

Query: 2 GDPMDQE 8
GDP DQ+
Sbjct: 48 GDPSDQQ 54


>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain

Query: 2 GDPMDQE 8
GDP DQ+
Sbjct: 48 GDPSDQQ 54


>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)

Query: 2 GDPMDQE 8
GDP DQ+
Sbjct: 48 GDPSDQQ 54


>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)

Query: 2 GDPMDQE 8
GDP DQ+
Sbjct: 48 GDPSDQQ 54


>sp|POLN_DCVEB|REPLICASE polyprotein|Drosophila C virus (strain EB)

Query: 2 GDPMDQEDL 10
G P+D ED
Sbjct: 639 GSPLDYEDF 647




106|Sequence|526|535|DQEDLGPCSE

>sp|DPOL_HBVOR|PROTEIN P|Orangutan hepatitis B virus (isolate

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 336 EDWGPCTE 343


>sp|DPOL_HBVGO|PROTEIN P|Gorilla hepatitis B virus (isolate

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 336 EDWGPCTE 343


>sp|DPOL_HBVGB|PROTEIN P|Gibbon hepatitis B virus subtype

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 336 EDWGPCTE 343


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 346 EDWGPCTE 353


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 346 EDWGPCTE 353


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 346 EDWGPCTE 353


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 346 EDWGPCTE 353


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 336 EDWGPCTE 343


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCTE 354


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 342 EDWGPCTE 349


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCTE 354


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCTE 354


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCTE 354


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCTE 354


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCTE 354


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCTE 354


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCTE 354


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCTE 354


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 349 EDWGPCTE 356


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCTE 354


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCTE 354


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCTE 354


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 336 EDWGPCAE 343


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 336 EDWGPCAE 343


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 336 EDWGPCAE 343


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 336 EDWGPCAE 343


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 336 EDWGPCAE 343


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 3 EDLGPCSE 10
ED GPC+E
Sbjct: 347 EDWGPCAE 354


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 QEDLGPCSE 10
+ED GPC E
Sbjct: 348 REDWGPCDE 356


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 QEDLGPCSE 10
+ED GPC E
Sbjct: 348 REDWGPCDE 356


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 QEDLGPCSE 10
+ED GPC E
Sbjct: 348 REDRGPCDE 356


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 3 EDLGPCSE 10
ED GPC E
Sbjct: 336 EDWGPCDE 343


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 3 EDLGPCSE 10
ED GPC E
Sbjct: 342 EDWGPCVE 349


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 3 EDLGPCSE 10
ED GPC E
Sbjct: 347 EDWGPCYE 354


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 3 EDLGPCSE 10
ED GPC E
Sbjct: 347 EDWGPCYE 354


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 3 EDLGPCSE 10
ED GPC E
Sbjct: 347 EDWGPCYE 354


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 3 EDLGPCSE 10
ED GPC E
Sbjct: 347 EDWGPCYE 354


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 3 EDLGPCSE 10
ED GPC E
Sbjct: 347 EDWGPCYE 354


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 3 EDLGPCSE 10
ED GPC E
Sbjct: 347 EDWGPCYE 354


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 3 EDLGPCSE 10
ED GPC E
Sbjct: 347 EDWGPCYE 354


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 3 EDLGPCSE 10
ED GPC E
Sbjct: 347 EDWGPCYE 354


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 3 EDLGPCSE 10
+D GPC+E
Sbjct: 346 QDWGPCTE 353


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 3 EDLGPCSE 10
+D GPC+E
Sbjct: 346 QDWGPCTE 353


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 2 QEDLGPCSE 10
ED GPC E
Sbjct: 346 HEDWGPCIE 354


>sp|DPOL_HBVCP|PROTEIN P|Chimpanzee hepatitis B virus (isolate

Query: 3 EDLGPCSE 10
+D GPC+E
Sbjct: 336 DDWGPCTE 343


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 3 EDLGPCSE 10
ED GPC++
Sbjct: 349 EDWGPCTD 356


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 3 EDLGPCSE 10
+D GPC+E
Sbjct: 347 DDWGPCAE 354


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 3 EDLGPCSE 10
ED GPC++
Sbjct: 349 EDWGPCAD 356


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 3 EDLGPCSE 10
+D GPC+E
Sbjct: 347 DDWGPCAE 354


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 3 EDLGPCSE 10
+D GPC+E
Sbjct: 347 DDWGPCAE 354


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 QEDLGPCSE 10
+ED GPC +
Sbjct: 341 REDWGPCDD 349


>sp|ORF2_PSHV1|UNCHARACTERIZED protein sORF2|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 QEDLGPCSE 10
+E LGPC E
Sbjct: 141 EETLGPCPE 149


>sp|GP_SFTS|ENVELOPMENT polyprotein|Dabie bandavirus (Severe fever with

Query: 2 QEDLGPCSE 10
+E GPCSE
Sbjct: 260 KEGTGPCSE 268


>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 2 QEDLGPCSE 10
+E GPCSE
Sbjct: 260 KEGTGPCSE 268


>sp|YL128_MIMIV|PUTATIVE GMC-type oxidoreductase L128|Acanthamoeba polyphaga mimivirus

Query: 1 DQEDLGPCS 9
D ED+GP S
Sbjct: 442 DLEDVGPAS 450


>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 18 QEDLDTCTE 26


>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 23 QEDLDTCTE 31


>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 18 QEDLDTCTE 26


>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 18 QEDLDTCTE 26


>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 18 QEDLDTCTE 26


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2 QEDLGPCSE 10
+E L PC E
Sbjct: 914 EEKLSPCKE 922


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 QEDLGPCSE 10
+E L PC E
Sbjct: 914 EEKLSPCKE 922


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 QEDLGPCSE 10
+E L PC E
Sbjct: 914 EEKLSPCKE 922


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 2 QEDLGPCSE 10
+E L PC E
Sbjct: 914 EEKLSPCKE 922


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 2 QEDLGPCSE 10
+E L PC E
Sbjct: 914 EEKLSPCKE 922


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2 QEDLGPCSE 10
+E L PC E
Sbjct: 914 EEKLSPCKE 922


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 QEDLGPCSE 10
+E L PC E
Sbjct: 914 EEKLSPCKE 922


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 QEDLGPCSE 10
+E L PC E
Sbjct: 914 EEKLSPCKE 922


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 2 QEDLGPCSE 10
+E L PC E
Sbjct: 914 EEKLSPCKE 922


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 2 QEDLGPCSE 10
+E L PC E
Sbjct: 914 EEKLSPCKE 922


>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 18 QEDLDTCTE 26


>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 23 QEDLDTCTE 31


>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 23 QEDLDTCTE 31


>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 23 QEDLDTCTE 31


>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)

Query: 2 QEDLGPCSE 10
Q+DLGP +
Sbjct: 326 QQDLGPVQQ 334


>sp|1A_TOBSV|REPLICATION protein 1a|Tobacco streak virus (strain WC)

Query: 4 DLGPC 8
DLGPC
Sbjct: 1041 DLGPC 1045


>sp|NEP_INCGL|NUCLEAR export protein|Influenza C virus (strain C/Great

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 18 QEDLDTCTE 26


>sp|NEP_INCCA|NUCLEAR export protein|Influenza C virus (strain C/California/1978)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 23 QEDLDTCTE 31


>sp|NEP_INCY6|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/1964)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 23 QEDLDTCTE 31


>sp|NEP_INCTA|NUCLEAR export protein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 18 QEDLDTCTE 26


>sp|NEP_INCMI|NUCLEAR export protein|Influenza C virus (strain C/Mississippi/1980)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 18 QEDLDTCTE 26


>sp|NEP_INCJH|NUCLEAR export protein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 18 QEDLDTCTE 26


>sp|NEP_INCHY|NUCLEAR export protein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 23 QEDLDTCTE 31


>sp|NEP_INCAA|NUCLEAR export protein|Influenza C virus (strain C/Ann

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 23 QEDLDTCTE 31


>sp|NEP_INCYA|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 2 QEDLGPCSE 10
QEDL C+E
Sbjct: 18 QEDLDTCTE 26


>sp|GI_PSHV1|ENVELOPE glycoprotein I|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 DQEDLGPCSE 10
+ EDL P SE
Sbjct: 357 EMEDLAPSSE 366




107|Sequence|531|540|GPCSEEEEFQ

>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2 PCSEEEE 8
PCS EEE
Sbjct: 2436 PCSAEEE 2442


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 PCSEEEE 8
PCS EEE
Sbjct: 2443 PCSAEEE 2449


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2 PCSEEEE 8
PCS EEE
Sbjct: 2436 PCSAEEE 2442


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 PCSEEEE 8
PCS EEE
Sbjct: 2455 PCSPEEE 2461


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2 PCSEEEE 8
PCS EEE
Sbjct: 2445 PCSAEEE 2451


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 PCSEEEE 8
PCS EEE
Sbjct: 2443 PCSAEEE 2449


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2 PCSEEEE 8
PCS EEE
Sbjct: 2459 PCSPEEE 2465


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 PCSEEEE 8
PCS EEE
Sbjct: 2455 PCSPEEE 2461


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 1 GPCSEEEE 8
GPCS++EE
Sbjct: 266 GPCSKQEE 273


>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PCSEEE 7
PCSEE+
Sbjct: 100 PCSEEQ 105


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PCSEEE 7
PCSEE+
Sbjct: 100 PCSEEQ 105


>sp|L_BDVV|RNA-DIRECTED RNA polymerase L|Borna disease virus (strain V)

Query: 2 PCSEEEEF 9
PC EE EF
Sbjct: 1556 PCLEELEF 1563


>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)

Query: 2 PCSEEEEF 9
PC EE EF
Sbjct: 1556 PCLEELEF 1563


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 2 PCSEEEE 8
PC+ EEE
Sbjct: 2444 PCAAEEE 2450


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2 PCSEEEE 8
PC+ EEE
Sbjct: 2435 PCAAEEE 2441


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 2 PCSEEEE 8
PC+ EEE
Sbjct: 2438 PCAAEEE 2444


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2 PCSEEEE 8
PC+ EEE
Sbjct: 2441 PCAAEEE 2447


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 PCSEEEE 8
PC+ EEE
Sbjct: 2441 PCAAEEE 2447


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2 PCSEEEE 8
PC+ EEE
Sbjct: 2441 PCAAEEE 2447


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 2 PCSEEEE 8
PC+ EEE
Sbjct: 2437 PCAAEEE 2443


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 PCSEEEE 8
PC+ EEE
Sbjct: 2440 PCAAEEE 2446


>sp|NSS_TSWVL|NON-STRUCTURAL protein NS-S|Tomato spotted wilt virus (strain

Query: 2 PCSEEE 7
PC EEE
Sbjct: 66 PCEEEE 71


>sp|RDRP_CMVAS|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain As)

Query: 2 PCSEEEEF 9
PCS+ +EF
Sbjct: 677 PCSDNDEF 684


>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)

Query: 2 PCSEEEEFQ 10
P SEE EF+
Sbjct: 43 PLSEETEFK 51


>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)

Query: 2 PCSEEEEF 9
PC E E+F
Sbjct: 156 PCDEIEQF 163


>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)

Query: 2 PCSEEEEFQ 10
P SEE EF+
Sbjct: 41 PLSEETEFK 49


>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)

Query: 2 PCSEEEEFQ 10
P SEE EF+
Sbjct: 41 PLSEETEFK 49


>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)

Query: 2 PCSEEEEFQ 10
P SEE EF+
Sbjct: 41 PLSEETEFK 49




108|Sequence|536|545|EEEFQQDVMA

>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 1 EEEFQQDVMA 10
+E+F++D++A
Sbjct: 2240 DEQFERDILA 2249


>sp|PORTL_BPKMV|PORTAL protein|Pseudomonas phage phiKMV

Query: 1 EEEFQQDVM 9
+EE++QD+M
Sbjct: 178 DEEYKQDLM 186




109|Sequence|541|550|QDVMARACLQ

>sp|VPP_BPP2|TERMINASE, ATPase subunit|Escherichia phage P2 (Bacteriophage P2)

Query: 1 QDVMARACLQ 10
+DV+ R CL+
Sbjct: 511 KDVIRRGCLE 520




110|Sequence|546|555|RACLQKLKGT

>sp|ANTIH_BPP2|PUTATIVE antiholin|Escherichia phage P2 (Bacteriophage P2)

Query: 1 RACLQKLKG 9
+AC Q+L+G
Sbjct: 127 KACRQRLEG 135


>sp|RDRP_PEMVW|PROTEIN P1-P2|Pea enation mosaic virus-1 (strain

Query: 3 CLQKLKG 9
C++KLKG
Sbjct: 823 CVRKLKG 829


>sp|VG48_ALHV1|UNCHARACTERIZED gene 48 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 RACLQKLKGT 10
+ACL L+GT
Sbjct: 32 QACLNFLRGT 41


>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 RACLQKLKG 9
RA +QKL+G
Sbjct: 941 RAAVQKLEG 949


>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 RACLQKLKG 9
RA +QKL+G
Sbjct: 944 RAAVQKLEG 952




111|Sequence|551|560|KLKGTTELLP

>sp|POL2_GFLV|RNA2 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 1 KLKGTTELL 9
KL+GTTELL
Sbjct: 1048 KLEGTTELL 1056


>sp|E1A_ADEM1|EARLY E1A 21 kDa protein|Murine adenovirus A serotype 1

Query: 2 LKGTTELLP 10
L+G T+LLP
Sbjct: 153 LRGLTDLLP 161




112|Sequence|556|565|TELLPKRPQH

>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)

Query: 1 TELLPKRPQ 9
T+LLPK P+
Sbjct: 104 TQLLPKSPE 112


>sp|Y036_OSHVF|UNCHARACTERIZED protein ORF36|Ostreid herpesvirus 1 (isolate France)

Query: 1 TELLPKRPQH 10
+EL+P +PQ+
Sbjct: 15 SELIPAKPQY 24


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1 TELLPKRP 8
T+LLPK P
Sbjct: 2001 TKLLPKMP 2008


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 TELLPKRP 8
TELL K+P
Sbjct: 3329 TELLKKKP 3336


>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 LLPKRPQH 10
+LP RP H
Sbjct: 66 MLPGRPSH 73


>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 PKRPQH 10
P RPQH
Sbjct: 253 PARPQH 258


>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 PKRPQH 10
P RPQH
Sbjct: 253 PARPQH 258




113|Sequence|561|570|KRPQHLPGHP

>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 2 RPQHLPGHP 10
RP LPG P
Sbjct: 266 RPLRLPGGP 274


>sp|GH_SHV21|ENVELOPE glycoprotein H|Saimiriine herpesvirus 2 (strain 11)

Query: 2 RPQ---HLPGH 9
RP+ H+PGH
Sbjct: 97 RPETNVHIPGH 107


>sp|DTX_CORBE|DIPHTHERIA toxin|Corynephage beta

Query: 2 RPQHLPGH 9
RP + PGH
Sbjct: 409 RPAYSPGH 416


>sp|DTX_COROM|DIPHTHERIA toxin|Corynephage omega

Query: 2 RPQHLPGH 9
RP + PGH
Sbjct: 402 RPAYSPGH 409


>sp|ORF1_TOTV|UNCHARACTERIZED protein ORF1|Tomato torrado virus (isolate Solanum

Query: 3 PQHLPGH 9
PQ +PGH
Sbjct: 66 PQLVPGH 72


>sp|YR635_MIMIV|UNCHARACTERIZED protein R635|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KRPQHLP 7
+RP+H+P
Sbjct: 115 RRPRHIP 121


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 2 RPQHLP 7
RP+H+P
Sbjct: 928 RPEHIP 933


>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16

Query: 4 QHLPGHP 10
QHL HP
Sbjct: 213 QHLANHP 219


>sp|CAPSD_ADVG|CAPSID protein VP1|Aleutian mink disease parvovirus (strain

Query: 1 KRPQHLPG 8
K PQH PG
Sbjct: 3 KIPQHYPG 10


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 1 KRPQHLPGH 9
KRP+ P H
Sbjct: 1116 KRPRETPSH 1124


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 1 KRPQHLPGH 9
KRP+ P H
Sbjct: 1116 KRPRETPSH 1124




114|Sequence|566|575|LPGHPGWYRK

>sp|POL_WMSV|GAG-POL polyprotein|Woolly monkey sarcoma virus (WMSV)

Query: 1 LPGHPGWY 8
LPG P WY
Sbjct: 1153 LPGVPAWY 1160


>sp|POL_KORV|GAG-POL polyprotein|Koala retrovirus (KoRV)

Query: 1 LPGHPGWY 8
LPG P WY
Sbjct: 1153 LPGVPAWY 1160


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 GHPGWYRK 10
GHP +Y K
Sbjct: 1610 GHPNYYSK 1617


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 GHPGWYRK 10
GHP +Y K
Sbjct: 1608 GHPNYYSK 1615


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 GHPGWYRK 10
GHP +Y K
Sbjct: 1608 GHPNYYSK 1615


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 GHPGWYRK 10
GHP +Y K
Sbjct: 1610 GHPNYYSK 1617


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 GHPGWYRK 10
GHP +Y K
Sbjct: 1608 GHPNYYSK 1615


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 GHPGWYRK 10
GHP +Y K
Sbjct: 1608 GHPNYYSK 1615


>sp|VMT8_MYXVL|KELCH repeat protein M-T8|Myxoma virus (strain Lausanne) (MYXV)

Query: 2 PGHPGWYR 9
PG+ WYR
Sbjct: 349 PGYDRWYR 356


>sp|NS1A_OASV1|NON-STRUCTURAL polyprotein 1A|Ovine astrovirus 1 (OAstV-1)

Query: 1 LPGHPGWYRK 10
+P HP W K
Sbjct: 392 VPTHPNWTAK 401


>sp|GB_MUHVS|ENVELOPE glycoprotein B|Murid herpesvirus 1 (strain Smith)

Query: 2 PGHPGWYRK 10
PG PG +R+
Sbjct: 837 PGAPGLHRR 845


>sp|POL_GALV|GAG-POL polyprotein|Gibbon ape leukemia virus (GALV)

Query: 1 LPGHPGWY 8
LPG P WY
Sbjct: 1152 LPGVPTWY 1159


>sp|Y1070_SIRV1|UNCHARACTERIZED protein 1070|Sulfolobus islandicus rod-shaped virus 1

Query: 1 LPGHPGWY 8
L G+P W+
Sbjct: 298 LTGYPAWF 305


>sp|RDRP_BPSP|RNA-DIRECTED RNA polymerase subunit beta|Enterobacteria phage SP (Bacteriophage

Query: 1 LPGHPGW 7
L GHP W
Sbjct: 163 LHGHPSW 169


>sp|NSP2_ROTPC|NON-STRUCTURAL protein 2|Rotavirus C (strain RVC/Pig/United States/Cowden/1980)

Query: 4 HPGW 7
HPGW
Sbjct: 263 HPGW 266


>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United

Query: 4 HPGW 7
HPGW
Sbjct: 263 HPGW 266


>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PGHPGWYRK 10
P +PGW R+
Sbjct: 439 PHYPGWGRR 447


>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PGHPGWYRK 10
P +PGW R+
Sbjct: 439 PHYPGWGRR 447


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 3 GHPGWYRK 10
G PGW+ K
Sbjct: 143 GSPGWWWK 150


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 4 HPGWYR 9
H GWYR
Sbjct: 44 HSGWYR 49


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 4 HPGWYR 9
H GWYR
Sbjct: 41 HSGWYR 46


>sp|VNS4_AQRVG|NON-STRUCTURAL protein 4|Aquareovirus G (isolate American grass

Query: 2 PGHPGW 7
P HPGW
Sbjct: 95 PSHPGW 100


>sp|NS1AB_OASV1|NON-STRUCTURAL polyprotein 1AB|Ovine astrovirus 1 (OAstV-1)

Query: 1 LPGHPGWYRK 10
+P HP W K
Sbjct: 392 VPTHPNWTAK 401


>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain

Query: 1 LPGHPGW 7
LP H GW
Sbjct: 720 LPAHRGW 726


>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 4 HPGWYRK 10
+ GWY+K
Sbjct: 140 YKGWYKK 146


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 LPGHPGW 7
+P HP W
Sbjct: 531 MPHHPHW 537


>sp|VS48_TBRVE|SATELLITE RNA 48 kDa protein|Tomato black ring virus (strain

Query: 2 PGHPGWY 8
P PGWY
Sbjct: 33 PCDPGWY 39


>sp|VC01_SWPVK|PUTATIVE Ig-like domain-containing protein C1|Swinepox virus (strain Kasza)

Query: 1 LPGHPGW 7
LPG PG+
Sbjct: 264 LPGEPGY 270


>sp|PORTL_BPN15|PORTAL protein|Escherichia phage N15 (Bacteriophage N15)

Query: 3 GHPGW 7
G+PGW
Sbjct: 207 GYPGW 211


>sp|PORTL_LAMBD|PORTAL protein B|Escherichia phage lambda (Bacteriophage lambda)

Query: 3 GHPGW 7
G+PGW
Sbjct: 210 GYPGW 214


>sp|DPO24_BPK64|DEPOLYMERASE, capsule K1-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 4 HPGWY 8
H GWY
Sbjct: 553 HQGWY 557


>sp|RDRP_PLRVW|PROTEIN P1-P2|Potato leafroll virus (strain

Query: 1 LPGHPGW 7
LP H GW
Sbjct: 720 LPTHRGW 726


>sp|VG70_BPML5|GENE 70 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 4 HPGW 7
HPGW
Sbjct: 25 HPGW 28


>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)

Query: 5 PGWY 8
PGWY
Sbjct: 406 PGWY 409


>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)

Query: 5 PGWY 8
PGWY
Sbjct: 405 PGWY 408


>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)

Query: 5 PGWY 8
PGWY
Sbjct: 405 PGWY 408


>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong

Query: 5 PGWY 8
PGWY
Sbjct: 406 PGWY 409


>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)

Query: 5 PGWY 8
PGWY
Sbjct: 406 PGWY 409


>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)

Query: 5 PGWY 8
PGWY
Sbjct: 405 PGWY 408


>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)

Query: 5 PGWY 8
PGWY
Sbjct: 405 PGWY 408


>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3

Query: 4 HPGWYR 9
HPGW R
Sbjct: 322 HPGWTR 327


>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)

Query: 5 PGWY 8
PGWY
Sbjct: 405 PGWY 408


>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)

Query: 5 PGWY 8
PGWY
Sbjct: 406 PGWY 409


>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)

Query: 5 PGWY 8
PGWY
Sbjct: 406 PGWY 409


>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)

Query: 5 PGWY 8
PGWY
Sbjct: 406 PGWY 409


>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a

Query: 4 HPGWY 8
HP WY
Sbjct: 437 HPAWY 441


>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b

Query: 4 HPGWY 8
HP WY
Sbjct: 437 HPAWY 441


>sp|UL106_HCMVA|UNCHARACTERIZED protein UL106|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 LPGHPGWY 8
LP HPG++
Sbjct: 29 LPPHPGFF 36




115|Sequence|571|580|GWYRKLCPRL

>sp|GCNT3_BHV4V|BETA-1,3-GALACTOSYL-O-GLYCOSYL-GLYCOPROTEIN beta-1,6-N-acetylglucosaminyltransferase|Bovine herpesvirus 4

Query: 1 GWYRKLCP 8
GW +KLCP
Sbjct: 5 GWKKKLCP 12


>sp|GCNT3_BHV4L|BETA-1,3-GALACTOSYL-O-GLYCOSYL-GLYCOPROTEIN beta-1,6-N-acetylglucosaminyltransferase|Bovine herpesvirus 4

Query: 1 GWYRKLCP 8
GW +KLCP
Sbjct: 5 GWKKKLCP 12


>sp|3602L_ASFB7|PROTEIN MGF 360-2L|African swine fever virus (strain

Query: 3 YRKLCPRL 10
Y+KLCP++
Sbjct: 347 YKKLCPKI 354


>sp|TRM1_TUHV2|TRIPARTITE terminase subunit 1|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 3 YRKLCPRL 10
YR+LCP L
Sbjct: 50 YRRLCPAL 57


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 2 WYRKLCPRL 10
W RKL PR+
Sbjct: 55 WARKLTPRV 63


>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus

Query: 3 YRKLCPR 9
YR CPR
Sbjct: 604 YRNYCPR 610


>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate

Query: 3 YRKLCPR 9
YR CPR
Sbjct: 604 YRNYCPR 610


>sp|PG136_VACCW|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Western

Query: 3 YRKLCPR 9
YR CPR
Sbjct: 603 YRNYCPR 609


>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)

Query: 3 YRKLCPR 9
YR CPR
Sbjct: 603 YRNYCPR 609


>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)

Query: 3 YRKLCPR 9
YR CPR
Sbjct: 603 YRNYCPR 609


>sp|TPRT_ASFM2|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 2 WYRKLCPRL 10
W ++ CPR
Sbjct: 176 WIKEHCPRF 184


>sp|TPRT_ASFB7|TRANS-PRENYLTRANSFERASE swine fever virus (strain

Query: 2 WYRKLCPRL 10
W ++ CPR
Sbjct: 176 WIKEHCPRF 184


>sp|TPRT_ASFWA|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 2 WYRKLCPRL 10
W ++ CPR
Sbjct: 176 WIKEHCPRF 184


>sp|TPRT_ASFP4|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 2 WYRKLCPRL 10
W ++ CPR
Sbjct: 176 WIKEHCPRF 184


>sp|UBC4_MIMIV|PROBABLE bifunctional E2/E3 enzyme R795|Acanthamoeba polyphaga mimivirus

Query: 2 WYRKL 6
WYRKL
Sbjct: 608 WYRKL 612


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 WYRKL 6
WYRKL
Sbjct: 242 WYRKL 246


>sp|RDRP_PAV|RNA-DIRECTED RNA polymerase|Pariacoto virus (PaV)

Query: 2 WYRKLCPRL 10
W R L PRL
Sbjct: 26 WLRSLRPRL 34


>sp|TPRT_ASFK5|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 2 WYRKLCPRL 10
W ++ CPR
Sbjct: 176 WIKENCPRF 184


>sp|UL07_HCMVA|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GWYRKLCPR 9
GW++ LC +
Sbjct: 211 GWWKLLCSK 219


>sp|GCNT3_BHV4D|BETA-1,3-GALACTOSYL-O-GLYCOSYL-GLYCOPROTEIN beta-1,6-N-acetylglucosaminyltransferase|Bovine herpesvirus 4

Query: 1 GWYRKLC 7
GW +KLC
Sbjct: 5 GWKKKLC 11


>sp|UL07_HCMVM|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 GWYRKLCPR 9
GW++ LC +
Sbjct: 211 GWWKLLCSK 219


>sp|AC11_NPVAC|PROTEIN AC11|Autographa californica nuclear polyhedrosis virus

Query: 2 WYRKLC 7
WY K C
Sbjct: 171 WYNKFC 176


>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United

Query: 2 WYRKLCPR 9
WYRK+ R
Sbjct: 11 WYRKIIDR 18


>sp|DPOL_OSHVF|DNA polymerase|Ostreid herpesvirus 1 (isolate France)

Query: 2 WYRKLC 7
WY+ +C
Sbjct: 863 WYKNIC 868


>sp|Y011_NPVOP|UNCHARACTERIZED 37.2 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 WYRKLC 7
WY K C
Sbjct: 170 WYHKFC 175


>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 1 GWYRKLCPRL 10
G Y +CP L
Sbjct: 1251 GGYSSICPNL 1260


>sp|L_EBLV1|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 1 (strain

Query: 1 GWYRKLCPRL 10
G Y +CP L
Sbjct: 1251 GGYSSICPNL 1260


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 1 GWYRKLCPRL 10
G Y +CP L
Sbjct: 1251 GGYSSICPNL 1260


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 GWYRKLCPRL 10
G Y +CP L
Sbjct: 1252 GGYSSICPNL 1261


>sp|VF378_IIV6|UNCHARACTERIZED protein 378R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 GWYRKLCPR 9
GWY+ PR
Sbjct: 185 GWYKAYLPR 193




116|Sequence|576|585|LCPRLDDPAW

>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 2 CPRLDDP 8
CPR+ DP
Sbjct: 1617 CPRIQDP 1623


>sp|TPRT_ASFM2|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 2 CPRLDDP 8
CPR DP
Sbjct: 181 CPRFPDP 187


>sp|TPRT_ASFK5|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 2 CPRLDDP 8
CPR DP
Sbjct: 181 CPRFPDP 187


>sp|TPRT_ASFB7|TRANS-PRENYLTRANSFERASE swine fever virus (strain

Query: 2 CPRLDDP 8
CPR DP
Sbjct: 181 CPRFPDP 187


>sp|TPRT_ASFWA|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 2 CPRLDDP 8
CPR DP
Sbjct: 181 CPRFPDP 187


>sp|TPRT_ASFP4|TRANS-PRENYLTRANSFERASE swine fever virus (isolate

Query: 2 CPRLDDP 8
CPR DP
Sbjct: 181 CPRFPDP 187


>sp|PNKP_MIMIV|PUTATIVE bifunctional polynucleotide phosphatase/kinase|Acanthamoeba

Query: 5 LDDPAW 10
LDDP W
Sbjct: 405 LDDPKW 410


>sp|V13_SPTNK|PUTATIVE helicase V13|Sputnik virophage

Query: 1 LCPRLDD 7
LCP LDD
Sbjct: 134 LCPFLDD 140


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1 LCPRLDDPAW 10
L + DDP W
Sbjct: 1581 LSLKFDDPVW 1590


>sp|OE66_NPVOP|OCCLUSION-DERIVED virus envelope protein E66|Orgyia pseudotsugata multicapsid

Query: 1 LCPRLDDP 8
+C RL DP
Sbjct: 138 ICARLPDP 145


>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate

Query: 1 LCPRLDDPAW 10
LC R+ AW
Sbjct: 186 LCHRISSEAW 195


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 LCPRLDDPAW 10
L RLD P W
Sbjct: 2019 LVKRLDMPVW 2028


>sp|REGQ_LAMBD|ANTITERMINATION protein Q|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 LCPRLDDPAW 10
L P L P W
Sbjct: 167 LIPNLTQPTW 176


>sp|REGQ_BPHK0|ANTITERMINATION protein Q|Escherichia phage HK022 (Bacteriophage HK022)

Query: 1 LCPRLDDPAW 10
L P L P W
Sbjct: 167 LIPNLTQPTW 176


>sp|DCK1_FOWPN|PROBABLE deoxycytidine kinase FPV059|Fowlpox virus (strain NVSL) (FPV)

Query: 5 LDDPAW 10
+DDP W
Sbjct: 112 MDDPEW 117


>sp|REGQ_BPPS3|ANTITERMINATION protein Q|Bacteriophage PS34

Query: 1 LCPRLDDPAW 10
L P L P W
Sbjct: 167 LIPNLTQPTW 176


>sp|REGQ_BPP22|ANTITERMINATION protein Q|Salmonella phage P22 (Bacteriophage P22)

Query: 1 LCPRLDDPAW 10
L P L P W
Sbjct: 167 LIPNLTQPTW 176


>sp|THYX_BPMD2|PROBABLE flavin-dependent thymidylate synthase|Mycobacterium phage D29

Query: 5 LDDPAW 10
L+DP+W
Sbjct: 11 LEDPSW 16


>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)

Query: 3 PRLDDPA 9
PRLDDP
Sbjct: 53 PRLDDPG 59


>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)

Query: 3 PRLDDPA 9
PRLDDP
Sbjct: 53 PRLDDPG 59


>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate

Query: 1 LCPRLDDPAW 10
LC ++ PAW
Sbjct: 788 LCAQVRCPAW 797




117|Sequence|581|590|DDPAWTPGPS

>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P

Query: 2 DPAWTPGP 9
D AW PGP
Sbjct: 767 DGAWLPGP 774


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1 DDPAWTP 7
DDP W P
Sbjct: 1586 DDPVWGP 1592


>sp|L_SFTS|RNA-DIRECTED RNA polymerase L|Dabie bandavirus (Severe fever with

Query: 3 PAWTPGPS 10
P W P PS
Sbjct: 333 PPWLPKPS 340


>sp|NSP1_ROTME|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 2 DPAWTPGP 9
+ +WTP P
Sbjct: 27 NSSWTPAP 34


>sp|LEF3_NPVOP|LATE expression factor 3|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 5 WTPGPS 10
WT GPS
Sbjct: 220 WTAGPS 225


>sp|ENV_SIVTN|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate TAN1)

Query: 1 DDPAWTPGPS 10
D+ WTP P+
Sbjct: 742 DNIRWTPSPA 751


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2 DPAWTPGP 9
+P W PGP
Sbjct: 247 NPLWNPGP 254


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 1 DDPAWTPGPS 10
D+P + PG S
Sbjct: 666 DEPCYLPGGS 675


>sp|002R_IIV3|UNCHARACTERIZED protein 002R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 DDPAWTP 7
DDP W P
Sbjct: 369 DDPTWAP 375


>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P

Query: 2 DPAWTPG 8
+P W PG
Sbjct: 206 EPGWFPG 212


>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)

Query: 1 DDPAWTPGPS 10
DD ++PGPS
Sbjct: 642 DDENFSPGPS 651


>sp|PTELO_BPPY5|PROTELOMERASE phage PY54 (Bacteriophage PY54)

Query: 2 DPAWTPGPS 10
+P WTP S
Sbjct: 427 NPKWTPNIS 435


>sp|RDRP_PMVK|RNA-DIRECTED RNA polymerase|Panicum mosaic virus (strain United

Query: 2 DPAWTPGP 9
DPA+ P P
Sbjct: 506 DPAFCPAP 513


>sp|OBP_PSHV1|REPLICATION origin-binding protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 DPAWTPGP 9
+P+W GP
Sbjct: 747 EPSWLTGP 754


>sp|RDRP_PRV|RNA-DIRECTED RNA polymerase|Pieris rapae virus

Query: 2 DPAWTPGPS 10
DP W GP+
Sbjct: 316 DPLWIVGPT 324




118|Sequence|586|595|TPGPSLLSLQ

>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain

Query: 2 PGPSLLS 8
PGPSLLS
Sbjct: 178 PGPSLLS 184


>sp|HN_SENDF|HEMAGGLUTININ-NEURAMINIDASE virus (strain Fushimi) (SeV)

Query: 2 PGPSLLS 8
PGPSLLS
Sbjct: 178 PGPSLLS 184


>sp|HN_SENDZ|HEMAGGLUTININ-NEURAMINIDASE virus (strain Z) (SeV)

Query: 2 PGPSLLS 8
PGPSLLS
Sbjct: 178 PGPSLLS 184


>sp|HN_SENDO|HEMAGGLUTININ-NEURAMINIDASE virus (strain Ohita) (SeV)

Query: 2 PGPSLLS 8
PGPSLLS
Sbjct: 178 PGPSLLS 184


>sp|HN_SENDA|HEMAGGLUTININ-NEURAMINIDASE virus (strain Hamamatsu) (SeV)

Query: 2 PGPSLLS 8
PGPSLLS
Sbjct: 178 PGPSLLS 184


>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 2 PGPSLLSL 9
PGP LL++
Sbjct: 176 PGPGLLTM 183


>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 2 PGPSLLSL 9
PGP LL++
Sbjct: 176 PGPGLLAM 183


>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 2 PGPSLLSL 9
PGP LL++
Sbjct: 176 PGPGLLAM 183


>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 2 PGPSLLSL 9
PGP LL++
Sbjct: 176 PGPGLLAM 183


>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 2 PGPSLLSL 9
PGP LL++
Sbjct: 176 PGPGLLAM 183


>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 2 PGPSLLSL 9
PGP LL++
Sbjct: 176 PGPGLLAM 183


>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 2 PGPSLLSL 9
PGP LL++
Sbjct: 176 PGPGLLAM 183


>sp|CAPSD_CRSVL|CAPSID protein|Carnation ringspot virus (isolate Lommel)

Query: 2 PGPSLLSLQ 10
P PSLLSL
Sbjct: 73 PTPSLLSLN 81


>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)

Query: 3 GPSLLSL 9
GPSLLSL
Sbjct: 121 GPSLLSL 127


>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)

Query: 1 TPGPSLLSLQ 10
+PGPS S+Q
Sbjct: 110 SPGPSRESIQ 119




119|Sequence|591|600|LLSLQMRVTP

>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 2 LSLQMRVTP 10
+SLQ+ VTP
Sbjct: 654 ISLQISVTP 662


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 LSLQMRVTP 10
+SLQ+ VTP
Sbjct: 977 ISLQISVTP 985


>sp|VPA_BP186|REPLICATION gene A protein|Escherichia phage 186 (Bacteriophage 186)

Query: 1 LLSLQMRVTP 10
+SLQ VTP
Sbjct: 179 FISLQFNVTP 188




120|Sequence|596|605|MRVTPKLMAL

***** No hits found ******


121|Sequence|601|610|KLMALTWDGF

>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1 KLMALTWDGF 10
K + LTW GF
Sbjct: 364 KTLPLTWTGF 373


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 1 KLMALTWDGF 10
K + LTW GF
Sbjct: 364 KTLPLTWTGF 373


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 1 KLMALTWDGF 10
K + LTW GF
Sbjct: 364 KTLPLTWTGF 373


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 1 KLMALTWDGF 10
K + LTW GF
Sbjct: 364 KTLPLTWTGF 373


>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)

Query: 1 KLMALTWDGF 10
K + LTW GF
Sbjct: 359 KTLPLTWTGF 368


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 1 KLMALTWDGF 10
K + LTW GF
Sbjct: 358 KTIPLTWTGF 367


>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1 KLMALTWDGF 10
K + LTW GF
Sbjct: 358 KTVPLTWTGF 367


>sp|RDRP_APRVF|RNA-DIRECTED RNA polymerase VP2|Aedes pseudoscutellaris reovirus (isolate

Query: 6 TWDGF 10
TWDGF
Sbjct: 182 TWDGF 186


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 LMALTWDGF 10
+AL WD F
Sbjct: 746 FLALAWDDF 754


>sp|VG85_BPML5|GENE 85 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 LMALTWDG 9
L +TWDG
Sbjct: 63 LFDITWDG 70




122|Sequence|606|615|TWDGFPLHYS

>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 TWDGFPLHY 9
+WD P+HY
Sbjct: 200 SWDPIPIHY 208


>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 TWDGFPLHY 9
+WD P+HY
Sbjct: 211 SWDPIPIHY 219


>sp|FPS_FUJSV|TYROSINE-PROTEIN kinase transforming protein Fps|Fujinami sarcoma virus (FSV)

Query: 2 WDGFPLHY 9
WDG P H+
Sbjct: 548 WDGQPRHF 555


>sp|FES_FSVST|TYROSINE-PROTEIN kinase transforming protein Fes|Feline sarcoma virus (strain

Query: 2 WDGFPLHY 9
WDG P H+
Sbjct: 152 WDGQPRHF 159


>sp|FES_FSVGA|TYROSINE-PROTEIN kinase transforming protein Fes|Feline sarcoma virus (strain

Query: 2 WDGFPLHY 9
WDG P H+
Sbjct: 284 WDGQPRHF 291


>sp|YL295_MIMIV|UNCHARACTERIZED protein L295|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 GFPLHYS 10
GFP HYS
Sbjct: 103 GFPNHYS 109


>sp|FPS_AVISP|TYROSINE-PROTEIN kinase transforming protein Fps|Avian sarcoma virus (strain PRCII)

Query: 2 WDGFPLHY 9
WDG P H+
Sbjct: 208 WDGQPRHF 215


>sp|YR050_MIMIV|UNCHARACTERIZED protein R50|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 TWDGFPLHY 9
+W G P H+
Sbjct: 7 SWTGLPRHF 15


>sp|RDRP_APRVF|RNA-DIRECTED RNA polymerase VP2|Aedes pseudoscutellaris reovirus (isolate

Query: 1 TWDGF 5
TWDGF
Sbjct: 182 TWDGF 186


>sp|DNAPR_BPT4|TERMINAL DNA protecting protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 WDGFPL 7
WD FPL
Sbjct: 157 WDKFPL 162


>sp|MVP_RRSVT|MOVEMENT and RNA silencing protein|Rice ragged stunt virus (isolate

Query: 2 WDGFPLHYS 10
W+G P+H S
Sbjct: 463 WNGTPVHGS 471


>sp|RAP94_FOWPN|RNA polymerase-associated transcription-specificity factor

Query: 3 DGFPLHY 9
D FP HY
Sbjct: 716 DPFPFHY 722


>sp|RDRP_RRSVT|RNA-DIRECTED RNA polymerase|Rice ragged stunt virus (isolate

Query: 1 TWDGFPLHY 9
TW FP +Y
Sbjct: 883 TWTCFPSYY 891


>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 TWDGFPLHY 9
T+D P+HY
Sbjct: 214 TFDPIPIHY 222


>sp|NCAP_CDVO|NUCLEOPROTEIN distemper virus (strain Onderstepoort)

Query: 3 DGFPLHYS 10
D +P+H+S
Sbjct: 445 DKYPIHFS 452


>sp|POL_FIVPE|POL polyprotein|Feline immunodeficiency virus (isolate Petaluma)

Query: 1 TWDGFPLH 8
TW G+ LH
Sbjct: 383 TWMGYELH 390


>sp|PTPH1_MDBVW|TYROSINE phosphatase-like protein H1|Microplitis demolitor bracovirus

Query: 2 WDGFPLHY 9
+ FPLHY
Sbjct: 193 YTNFPLHY 200


>sp|V024_FOWPN|PUTATIVE ankyrin repeat protein FPV024|Fowlpox virus (strain NVSL) (FPV)

Query: 4 GFPLHYS 10
G PLHY+
Sbjct: 264 GTPLHYA 270


>sp|NCAP_CVTNC|NUCLEOPROTEIN coronavirus (strain NC95) (TCoV)

Query: 2 WDGFPLH 8
WD PLH
Sbjct: 155 WDFIPLH 161


>sp|FIBER_BPP22|TAIL spike protein|Salmonella phage P22 (Bacteriophage P22)

Query: 2 WDGFPL 7
WDGF L
Sbjct: 392 WDGFDL 397


>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)

Query: 1 TWDGFPLHYS 10
T DGF LH +
Sbjct: 864 TCDGFNLHLT 873


>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)

Query: 1 TWDGFPLHYS 10
T DGF LH +
Sbjct: 864 TCDGFNLHLT 873


>sp|MVP_PVYN|P3N-PIPO polyprotein|Potato virus Y (strain N)

Query: 1 TWDGFPLHYS 10
T DGF LH +
Sbjct: 864 TCDGFNLHLT 873


>sp|MVP_PVYHU|P3N-PIPO polyprotein|Potato virus Y (strain Hungarian)

Query: 1 TWDGFPLHYS 10
T DGF LH +
Sbjct: 864 TCDGFNLHLT 873


>sp|L_SV41|RNA-DIRECTED RNA polymerase L|Simian virus 41 (SV41)

Query: 2 WDGFPLHY 9
WD PL Y
Sbjct: 2248 WDSIPLVY 2255


>sp|HBSAG_WHV2|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 1 TWDGFPL 7
TW GFP+
Sbjct: 70 TWQGFPV 76


>sp|HBSAG_WHV4|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 1 TWDGFPL 7
TW GFP+
Sbjct: 70 TWQGFPV 76


>sp|HBSAG_WHV3|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 1 TWDGFPL 7
TW GFP+
Sbjct: 70 TWQGFPV 76


>sp|HBSAG_WHV5|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 1 TWDGFPL 7
TW GFP+
Sbjct: 70 TWQGFPV 76


>sp|HBSAG_WHV1|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 1 TWDGFPL 7
TW GFP+
Sbjct: 70 TWQGFPV 76


>sp|ENLYS_BP263|ENDOLYSIN 2638A|Staphylococcus phage 2638A

Query: 1 TWDGFPLHY 9
T+DG+P +Y
Sbjct: 21 TYDGYPKNY 29


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 4 GFPLHY 9
GFP HY
Sbjct: 773 GFPKHY 778


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 2 WDGFPLHY 9
WDG HY
Sbjct: 133 WDGEIYHY 140




123|Sequence|611|620|PLHYSERHGW

>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12

Query: 2 LHYSERHGW 10
LHY+ RHG+
Sbjct: 347 LHYTFRHGY 355


>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40

Query: 2 LHYSERHGW 10
LHY+ RHG+
Sbjct: 330 LHYAFRHGY 338


>sp|SHUT_ADECR|SHUTOFF protein|Canine adenovirus serotype 1 (strain

Query: 2 LHYSERHGW 10
LHY+ RHG+
Sbjct: 307 LHYTFRHGY 315


>sp|SHUT_ADECC|SHUTOFF protein|Canine adenovirus serotype 1 (strain

Query: 2 LHYSERHGW 10
LHY+ RHG+
Sbjct: 307 LHYTFRHGY 315


>sp|YL384_MIMIV|UNCHARACTERIZED protein L384|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 HYSERH 8
H+SERH
Sbjct: 61 HFSERH 66


>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41

Query: 2 LHYSERHGW 10
LHY+ RHG+
Sbjct: 332 LHYAFRHGY 340


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 2 LHYSERHGW 10
L Y+ RH W
Sbjct: 524 LEYAARHSW 532


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 2 LHYSERHGW 10
L Y+ RH W
Sbjct: 527 LEYAARHSW 535


>sp|YR040_MIMIV|UNCHARACTERIZED protein R40|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 HYSERHG 9
HY E HG
Sbjct: 44 HYCENHG 50


>sp|RDRP_CMVMB|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain MB-8)

Query: 2 LHYSERH 8
L+YS+RH
Sbjct: 745 LYYSDRH 751


>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 4 YSERHG 9
Y+ERHG
Sbjct: 966 YAERHG 971


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 4 YSERHG 9
Y+ERHG
Sbjct: 966 YAERHG 971


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 4 YSERHG 9
Y+ERHG
Sbjct: 966 YAERHG 971


>sp|CP_CSVMV|PUTATIVE Polyprotein CP|Cassava vein mosaic virus (CsVMV)

Query: 1 PLHYSERHGW 10
PLHY E +
Sbjct: 799 PLHYEEEEKY 808


>sp|VF030_IIV3|UNCHARACTERIZED protein 106R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 LHYSERHG 9
LHY+ R G
Sbjct: 386 LHYTSRRG 393


>sp|CHMA_BPDPK|CHIMALLIN phage phiKZ

Query: 3 HYSERHG 9
HY++ HG
Sbjct: 482 HYTDEHG 488


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 LHYSERHG 9
LHYSE G
Sbjct: 2371 LHYSELKG 2378


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 LHYSERHG 9
LHYSE G
Sbjct: 2371 LHYSELKG 2378


>sp|ESTE_HVAVE|PUTATIVE esterase|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 2 LHYSERHGW 10
H S R GW
Sbjct: 630 FHQSARRGW 638


>sp|VF509_ASFB7|PUTATIVE ATP-dependent RNA helicase QP509L|African swine fever virus (strain

Query: 2 LHYSERHGW 10
LH +E H W
Sbjct: 326 LHTAEPHKW 334


>sp|VF509_ASFP4|PUTATIVE ATP-dependent RNA helicase QP509L|African swine fever virus

Query: 2 LHYSERHGW 10
LH +E H W
Sbjct: 326 LHTAEPHKW 334


>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)

Query: 2 LHYSERHGW 10
HY R GW
Sbjct: 167 FHYIYRGGW 175


>sp|Y098_OSHVF|UNCHARACTERIZED protein ORF98|Ostreid herpesvirus 1 (isolate France)

Query: 1 PLHYSERH 8
PL+YS H
Sbjct: 8 PLYYSSTH 15


>sp|VF509_ASFWA|PUTATIVE ATP-dependent RNA helicase QP509L|African swine fever virus

Query: 2 LHYSERHGW 10
LH +E H W
Sbjct: 326 LHTAEPHKW 334


>sp|RDRP_CRSVL|RNA-DIRECTED RNA polymerase|Carnation ringspot virus (isolate Lommel)

Query: 1 PLHYSERH 8
P HYS H
Sbjct: 752 PTHYSRLH 759


>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38

Query: 3 HYSERHG 9
HY+ RHG
Sbjct: 44 HYARRHG 50


>sp|VF175_ASFM2|UNCHARACTERIZED protein B175L|African swine fever virus (isolate

Query: 2 LHYSERHGW 10
LHY+E W
Sbjct: 107 LHYTEPKKW 115




124|Sequence|616|625|ERHGWGYLVP

>sp|RDRP_FDVS|RNA-DIRECTED RNA polymerase VP1|Fiji disease virus (isolate Sugarcane)

Query: 1 ERHGWGY 7
ERH WG+
Sbjct: 1116 ERHTWGF 1122


>sp|RDRP_MYRV9|RNA-DIRECTED RNA polymerase VP1|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 1 ERHGWGYLVP 10
+ HG+G+++P
Sbjct: 1185 DAHGYGHIIP 1194


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 2 RHGWGYLVP 10
+HG GY P
Sbjct: 361 KHGEGYFTP 369


>sp|BP07_BPT4|BASEPLATE wedge protein gp7|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 ERHGWGYL 8
E H W YL
Sbjct: 697 EEHAWEYL 704


>sp|REP3_MVDC3|PARA-REP C3|Milk vetch dwarf C3 alphasatellite

Query: 2 RHGWGYL 8
+ GWGYL
Sbjct: 191 KQGWGYL 197


>sp|RDRP_ICRSV|RNA replication protein|Indian citrus ringspot virus (isolate

Query: 1 ERHGWGYLVP 10
++ GW LVP
Sbjct: 1097 QKSGWPTLVP 1106


>sp|NS1_PAVHH|INITIATOR protein NS1|Hamster parvovirus H1

Query: 3 HGWGYL 8
HGW Y+
Sbjct: 370 HGWNYI 375


>sp|NS1_PAVL3|INITIATOR protein NS1|Parvovirus LuIII

Query: 3 HGWGYL 8
HGW Y+
Sbjct: 370 HGWNYI 375


>sp|VP2_POVHA|MINOR capsid protein VP2|Hamster polyomavirus (HaPyV) (Mesocricetus

Query: 3 HGWGY 7
HGWG+
Sbjct: 154 HGWGH 158


>sp|DNB2_ADES1|DNA-BINDING protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 3 HGWG 6
HGWG
Sbjct: 108 HGWG 111


>sp|VG70_BPMD2|GENE 70 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 ERHGW 5
ERHGW
Sbjct: 23 ERHGW 27


>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 HGWGYLVP 10
H W YL P
Sbjct: 72 HRWSYLCP 79


>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 HGWGYLVP 10
H W YL P
Sbjct: 72 HRWSYLCP 79


>sp|REP6_SCSC6|PARA-REP C6|Subterranean clover stunt C6 alphasatellite

Query: 2 RHGWGYL 8
+ GWGYL
Sbjct: 192 KDGWGYL 198


>sp|Y044_SIFVH|UNCHARACTERIZED protein 44|Sulfolobus islandicus filamentous virus (isolate

Query: 3 HGWGYLVP 10
H +GY++P
Sbjct: 33 HVFGYIIP 40


>sp|DEPOL_BPK41|DEPOLYMERASE, capsule KN4-specific|Klebsiella phage KN4-1 (Bacteriophage KN4-1)

Query: 3 HGWGY 7
+GWGY
Sbjct: 530 NGWGY 534


>sp|NS1_MUMIM|INITIATOR protein NS1|Murine minute virus (strain MVMi)

Query: 3 HGWGYL 8
HGW Y+
Sbjct: 370 HGWNYV 375


>sp|NS1_MUMIP|INITIATOR protein NS1|Murine minute virus (strain MVM

Query: 3 HGWGYL 8
HGW Y+
Sbjct: 370 HGWNYV 375


>sp|FIB37_BPS16|LONG tail fiber protein Gp37|Salmonella phage S16 (Salmonella phage

Query: 3 HGWGYLV 9
HGW Y +
Sbjct: 396 HGWWYYI 402


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 3 HGWGYLVP 10
HGW + +P
Sbjct: 143 HGWWWKLP 150


>sp|ENV_FIVT2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate TM2)

Query: 4 GWGYL 8
GWGY+
Sbjct: 541 GWGYM 545


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 RHGWGYL 8
R GWG L
Sbjct: 774 RRGWGVL 780




125|Sequence|621|630|GYLVPGRRDN

>sp|YR327_MIMIV|UNCHARACTERIZED protein R327|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 LVPGRRDN 10
VPGRR+N
Sbjct: 1201 FVPGRRNN 1208


>sp|PORTL_BPT3|PORTAL protein|Enterobacteria phage T3 (Bacteriophage T3)

Query: 1 GYLVPGRRDN 10
G VPGRR++
Sbjct: 317 GDFVPGRRED 326


>sp|VP40_NPVBM|STRUCTURAL glycoprotein p40|Bombyx mori nuclear polyhedrosis virus

Query: 1 GYLVPGRRDN 10
GY+ P RDN
Sbjct: 39 GYVPPATRDN 48


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 2 YLVPGRRDN 10
Y++P RDN
Sbjct: 1371 YIIPRNRDN 1379


>sp|MYB_AVIMB|TRANSFORMING protein Myb|Avian myeloblastosis virus (AMV)

Query: 3 LVPGRRDN 10
L+PGR DN
Sbjct: 101 LLPGRTDN 108


>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)

Query: 3 LVPGRR 8
LVPGRR
Sbjct: 972 LVPGRR 977


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 2 YLVPGRRDN 10
Y++P RDN
Sbjct: 1370 YIIPKGRDN 1378


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 2 YLVPGRRDN 10
Y++P RDN
Sbjct: 1370 YIIPKGRDN 1378


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 2 YLVPGRRDN 10
Y++P RDN
Sbjct: 1370 YIIPKGRDN 1378


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 2 YLVPGRRDN 10
Y++P RDN
Sbjct: 1370 YIIPRGRDN 1378


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2 YLVPGRRDN 10
Y++P RDN
Sbjct: 1371 YIIPRGRDN 1379


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 2 YLVPGRRDN 10
Y++P RDN
Sbjct: 1370 YIIPRGRDN 1378


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 2 YLVPGRRDN 10
Y++P RDN
Sbjct: 1370 YIIPRGRDN 1378


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 2 YLVPGRRDN 10
Y++P RDN
Sbjct: 1371 YIIPRGRDN 1379


>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)

Query: 2 YLVPGRRD 9
YL P +RD
Sbjct: 400 YLTPSKRD 407


>sp|E11_FOWPN|PROTEIN E11 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 GYLVPGRRDN 10
GY+V R DN
Sbjct: 118 GYIVKVRSDN 127


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1 GYLVPG 6
GYL+PG
Sbjct: 2397 GYLLPG 2402


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1 GYLVPG 6
GY++PG
Sbjct: 2387 GYMIPG 2392


>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 3 LVPGRRDN 10
L PGRR N
Sbjct: 612 LAPGRRRN 619


>sp|GP16_BPP22|INTERNAL virion protein gp16|Salmonella phage P22 (Bacteriophage P22)

Query: 1 GYLVPG 6
GYL+PG
Sbjct: 130 GYLIPG 135


>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate

Query: 5 PGRRDN 10
PGRR+N
Sbjct: 1416 PGRREN 1421


>sp|VP4_MPRVN|UNCHARACTERIZED protein VP4|Micromonas pusilla reovirus (isolate Netherlands/2005)

Query: 1 GYLVPG 6
GYL+PG
Sbjct: 124 GYLLPG 129




126|Sequence|626|635|GRRDNLAKLP

>sp|YL388_MIMIV|UNCHARACTERIZED protein L388|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GRRDNLAKL 9
G+RDN KL
Sbjct: 215 GKRDNFGKL 223


>sp|ENV_FSVGA|ENVELOPE glycoprotein|Feline sarcoma virus (strain Gardner-Arnstein)

Query: 3 RDNLAKL 9
RDN+AKL
Sbjct: 569 RDNMAKL 575


>sp|ENV_FLVLB|ENVELOPE glycoprotein|Feline leukemia virus (strain B/lambda-B1)

Query: 3 RDNLAKL 9
RDN+AKL
Sbjct: 569 RDNMAKL 575


>sp|ENV_FLVGL|ENVELOPE glycoprotein|Feline leukemia virus (strain A/Glasgow-1)

Query: 3 RDNLAKL 9
RDN+AKL
Sbjct: 549 RDNMAKL 555


>sp|POL_OMVVS|POL polyprotein|Ovine maedi visna related virus

Query: 3 RDNLAKL 9
RDN+AKL
Sbjct: 108 RDNMAKL 114


>sp|ENV_FSVSM|ENVELOPE glycoprotein|Feline sarcoma virus (strain SM)

Query: 3 RDNLAKL 9
RDN+AKL
Sbjct: 552 RDNMAKL 558


>sp|ENV_FLVSA|ENVELOPE glycoprotein|Feline leukemia virus (strain C/Sarma)

Query: 3 RDNLAKL 9
RDN+AKL
Sbjct: 546 RDNMAKL 552


>sp|YL055_MIMIV|PUTATIVE BTB/POZ domain-containing protein L55|Acanthamoeba polyphaga

Query: 4 DNLAKLP 10
DNL KLP
Sbjct: 142 DNLEKLP 148


>sp|ENV_FLVC6|ENVELOPE glycoprotein|Feline leukemia virus (isolate CFE-6)

Query: 3 RDNLAKL 9
RDN+AKL
Sbjct: 568 RDNMAKL 574


>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 1 GRRDNLAKL 9
G R+N+AKL
Sbjct: 253 GPRENVAKL 261




127|Sequence|631|640|LAKLPTGTTL

>sp|IE61_CHV9D|E3 ubiquitin-protein ligase IE61|Cercopithecine herpesvirus 9 (strain

Query: 1 LAKLPTGTT 9
LA LPTG+T
Sbjct: 444 LAALPTGST 452




128|Sequence|636|645|TGTTLESAGV

***** No hits found ******


129|Sequence|641|650|ESAGVVCPYR

>sp|COA1_TTV1K|COAT protein TP1|Thermoproteus tenax virus 1 (strain

Query: 2 SAGVVCPYR 10
+A +CPYR
Sbjct: 24 AADTICPYR 32


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 5 VVCPYR 10
V+CPYR
Sbjct: 2706 VLCPYR 2711


>sp|Y189_ATV|PUTATIVE zinc finger protein ORF189|Acidianus two-tailed virus (ATV)

Query: 4 GVVCPY 9
G VCPY
Sbjct: 113 GYVCPY 118




130|Sequence|646|655|VCPYRAIESL

>sp|COA1_TTV1K|COAT protein TP1|Thermoproteus tenax virus 1 (strain

Query: 1 VCPYRAIES 9
+CPYRA S
Sbjct: 28 ICPYRAYRS 36


>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3

Query: 2 CPYRAI 7
CPY+A+
Sbjct: 483 CPYKAV 488


>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 2 CPYRAIESL 10
CPY+A+
Sbjct: 387 CPYKAVNQF 395


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 2 CPYRAIESL 10
CPY+A+
Sbjct: 448 CPYKAVNQF 456


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 2 CPYRAI 7
CPY+A+
Sbjct: 514 CPYKAV 519


>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain

Query: 2 CPYRAI 7
CPY+A+
Sbjct: 471 CPYQAV 476


>sp|DPOL_ADECT|DNA polymerase|Canine adenovirus serotype 2 (strain

Query: 2 CPYRAI 7
CPY+A+
Sbjct: 472 CPYQAV 477


>sp|DPOL_ADEG1|DNA polymerase|Fowl adenovirus A serotype 1

Query: 2 CPYRAI 7
CPY AI
Sbjct: 322 CPYEAI 327




131|Sequence|651|660|AIESLYRKHC

>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 2 IESLYRKH 9
IE+LY KH
Sbjct: 398 IETLYEKH 405


>sp|GIN_BPMU|SERINE recombinase gin|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 AIESLYRKH 9
A+ +LY+KH
Sbjct: 171 ALSTLYKKH 179


>sp|GIN_BPD10|SERINE recombinase gin|Escherichia phage D108 (Bacteriophage D108)

Query: 1 AIESLYRKH 9
A+ +LY+KH
Sbjct: 171 ALSTLYKKH 179


>sp|L_SFTS|RNA-DIRECTED RNA polymerase L|Dabie bandavirus (Severe fever with

Query: 2 IESLYRKHC 10
+ S YR HC
Sbjct: 1778 VASAYRGHC 1786


>sp|REP_PCV2|REPLICATION-ASSOCIATED protein|Porcine circovirus 2 (PCV2)

Query: 1 AIESLYRK 8
A+E+LYR+
Sbjct: 270 AVEALYRR 277


>sp|REP_PCV1|REPLICATION-ASSOCIATED protein|Porcine circovirus 1 (PCV1)

Query: 1 AIESLYRK 8
A+E+LYR+
Sbjct: 267 AVEALYRR 274


>sp|VXIS_BPSFV|PROBABLE excisionase hkaC|Shigella phage Sf6 (Shigella flexneri

Query: 5 LYRKHC 10
LYR HC
Sbjct: 49 LYRDHC 54


>sp|VXIS_BPHK6|PROBABLE excisionase hkaC|Enterobacteria phage HK620 (Bacteriophage HK620)

Query: 5 LYRKHC 10
LYR HC
Sbjct: 49 LYRDHC 54


>sp|YL397_MIMIV|UNCHARACTERIZED protein L397|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 IESLYRKHC 10
+ SLY HC
Sbjct: 164 VSSLYGNHC 172


>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P

Query: 5 LYRKHC 10
LY++HC
Sbjct: 176 LYKQHC 181


>sp|LEF8_NPVAC|PROBABLE DNA-directed RNA polymerase catalytic|Autographa californica

Query: 3 ESLYRKHC 10
+ LY KHC
Sbjct: 116 DKLYAKHC 123


>sp|LEF4_NPVOP|MRNA capping enzyme LEF-4|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 AIESLYRKHC 10
A+E L R HC
Sbjct: 334 AVECLNRLHC 343


>sp|RPOB_NPVOP|PROBABLE DNA-directed RNA polymerase subunit|Orgyia pseudotsugata

Query: 3 ESLYRKHC 10
+ LY KHC
Sbjct: 118 DKLYAKHC 125


>sp|L_TSWV1|RNA-DIRECTED RNA polymerase L|Tomato spotted wilt virus (strain

Query: 3 ESLYRKH 9
ESLY KH
Sbjct: 413 ESLYGKH 419


>sp|NEC1_PSHV1|NUCLEAR egress protein 1|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 ESLYRKHC 10
E +YR++C
Sbjct: 297 EDVYRRYC 304




132|Sequence|656|665|YRKHCLEQGK

>sp|YL226_MIMIV|UNCHARACTERIZED protein L226|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 KHCLEQG 9
KHC+E G
Sbjct: 422 KHCIENG 428


>sp|LT_SV40|LARGE T antigen|Simian virus 40 (SV40)

Query: 1 YRKHCLEQGK 10
Y KHCLE+ +
Sbjct: 552 YLKHCLERSE 561


>sp|CAPSD_NODAM|CAPSID protein alpha|Nodamura virus (strain Mag115) (NoV)

Query: 2 RKHCLEQ 8
+KHCL Q
Sbjct: 87 KKHCLTQ 93


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 2 RKHCLEQG 9
R++C EQG
Sbjct: 1474 RQYCREQG 1481


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 2 RKHCLEQG 9
R++C EQG
Sbjct: 1474 RQYCREQG 1481


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 2 RKHCLEQG 9
R++C EQG
Sbjct: 1474 RQYCREQG 1481


>sp|VF423_ASFM2|UNCHARACTERIZED protein E423R|African swine fever virus (isolate

Query: 1 YRKHCLEQGK 10
Y CL+QGK
Sbjct: 128 YFNTCLKQGK 137


>sp|RDRP_ROTPC|RNA-DIRECTED RNA polymerase|Rotavirus C (strain RVC/Pig/United States/Cowden/1980)

Query: 4 HCLEQGK 10
HC+E+G+
Sbjct: 1038 HCIEKGE 1044


>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United

Query: 4 HCLEQGK 10
HC+E+G+
Sbjct: 1046 HCIEKGE 1052


>sp|VF423_ASFWA|UNCHARACTERIZED protein E423R|African swine fever virus (isolate

Query: 1 YRKHCLEQGK 10
Y CL QGK
Sbjct: 128 YFNTCLNQGK 137


>sp|VF423_ASFP4|UNCHARACTERIZED protein E423R|African swine fever virus (isolate

Query: 1 YRKHCLEQGK 10
Y CL QGK
Sbjct: 128 YFNTCLNQGK 137


>sp|VF423_ASFB7|UNCHARACTERIZED protein E423R|African swine fever virus (strain

Query: 1 YRKHCLEQGK 10
Y CL QGK
Sbjct: 128 YFNTCLNQGK 137


>sp|RDRP_PSVJ|RNA-DIRECTED RNA polymerase 2a|Peanut stunt virus (strain J)

Query: 3 KHCLE 7
KHCLE
Sbjct: 498 KHCLE 502


>sp|RDRP_CMVY|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Y)

Query: 3 KHCLE 7
KHCLE
Sbjct: 511 KHCLE 515


>sp|RDRP_CMVQ|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Q)

Query: 3 KHCLE 7
KHCLE
Sbjct: 508 KHCLE 512


>sp|RDRP_CMVNT|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain NT9)

Query: 3 KHCLE 7
KHCLE
Sbjct: 511 KHCLE 515


>sp|RDRP_CMVKO|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Kor)

Query: 3 KHCLE 7
KHCLE
Sbjct: 511 KHCLE 515


>sp|RDRP_CMVK|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain K)

Query: 3 KHCLE 7
KHCLE
Sbjct: 511 KHCLE 515


>sp|RDRP_CMVFN|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain FNY)

Query: 3 KHCLE 7
KHCLE
Sbjct: 511 KHCLE 515


>sp|VF423_ASFK5|UNCHARACTERIZED protein E423R|African swine fever virus (isolate

Query: 1 YRKHCLEQGK 10
Y CL QGK
Sbjct: 128 YFNTCLNQGK 137


>sp|REP_BPIKE|REPLICATION-ASSOCIATED protein G2P|Salmonella phage IKe (Bacteriophage IKe)

Query: 1 YRKHCLE 7
Y K+CLE
Sbjct: 222 YEKNCLE 228


>sp|BEL3_FOAMV|PROTEIN Bel-3|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3 KHCLEQGK 10
KHCL GK
Sbjct: 136 KHCLMAGK 143


>sp|P49_ASFM2|MINOR capsid protein p49|African swine fever virus (isolate

Query: 2 RKHCLEQ 8
+KHCL Q
Sbjct: 143 QKHCLTQ 149




133|Sequence|661|670|LEQGKQQLMP

>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LEQGKQQLMP 10
LEQGK+ L P
Sbjct: 870 LEQGKRTLTP 879


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LEQGKQQLMP 10
LEQGK+ L P
Sbjct: 870 LEQGKRTLTP 879


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LEQGKQQLMP 10
LEQGK+ L P
Sbjct: 870 LEQGKRTLTP 879


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LEQGKQQLMP 10
LEQGK+ L P
Sbjct: 870 LEQGKRTLTP 879


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LEQGKQQLMP 10
LEQGK+ L P
Sbjct: 870 LEQGKRTLTP 879


>sp|Y345_AFV2P|UNCHARACTERIZED protein ORF345|Acidianus filamentous virus 2 (isolate

Query: 1 LEQGKQQLMP 10
LEQG+ ++MP
Sbjct: 210 LEQGEFRIMP 219


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 3 QGKQQLM 9
QGK+QLM
Sbjct: 778 QGKKQLM 784


>sp|RDRP_ACLSP|RNA-DIRECTED RNA polymerase|Apple chlorotic leaf spot virus

Query: 1 LEQGKQQLMP 10
L+QG + LMP
Sbjct: 799 LKQGNEILMP 808




134|Sequence|666|675|QQLMPQEAGL

>sp|SF33K_ADEB3|PROTEIN 33K|Bovine adenovirus B serotype 3

Query: 1 QQLMPQEAGL 10
QQL PQ AGL
Sbjct: 20 QQLPPQTAGL 29


>sp|PKG2_ADEB3|PACKAGING protein 2|Bovine adenovirus B serotype 3

Query: 1 QQLMPQEAGL 10
QQL PQ AGL
Sbjct: 20 QQLPPQTAGL 29


>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)

Query: 1 QQLMPQEAGL 10
+QL+PQE L
Sbjct: 6 RQLLPQETKL 15


>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 QQLMPQEAGL 10
+QL+PQE L
Sbjct: 6 RQLLPQETKL 15


>sp|PRXH_BPMD2|PUTATIVE non-heme haloperoxidase|Mycobacterium phage D29 (Mycobacteriophage

Query: 2 QLMPQEAGL 10
Q++P EAGL
Sbjct: 222 QIVPYEAGL 230


>sp|TIPI_BPN15|TAIL tip assembly protein I|Escherichia phage N15 (Bacteriophage N15)

Query: 1 QQLMPQEAGL 10
Q L PQ AGL
Sbjct: 132 QMLSPQPAGL 141




135|Sequence|671|680|QEAGLAEEFL

>sp|VG05_BPP21|HEAD-TAIL preconnector protein GP5|Enterobacteria phage P21 (Bacteriophage

Query: 2 EAGLAEEFL 10
EAGLA+E +
Sbjct: 272 EAGLADELI 280




136|Sequence|676|685|AEEFLLTDNS

>sp|CAPSD_BPFR|CAPSID protein|Enterobacteria phage fr (Bacteriophage fr)

Query: 2 EEFLLTDN 9
EEF+L DN
Sbjct: 6 EEFVLVDN 13


>sp|VP08_BPAPS|PUTATIVE protein p8|Acyrthosiphon pisum secondary endosymbiont phage

Query: 2 EEFLLTDNS 10
++FLLTD S
Sbjct: 61 KKFLLTDGS 69




137|Sequence|681|690|LTDNSAIWQT

>sp|ENV_SIVGB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate GB1)

Query: 2 TDNSAIWQT 10
TDNS++W T
Sbjct: 69 TDNSSLWVT 77


>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 LTDNSAIW 8
+TDNS +W
Sbjct: 95 VTDNSTLW 102


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 2 TDNSAIWQT 10
T+N +W+T
Sbjct: 950 TENKLVWKT 958


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 2 TDNSAIWQT 10
T+N +W+T
Sbjct: 951 TENRLVWKT 959


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 2 TDNSAIWQT 10
T+N +W+T
Sbjct: 951 TENRLVWKT 959


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2 TDNSAIWQT 10
T+N +W+T
Sbjct: 950 TENRLVWKT 958




138|Sequence|686|695|AIWQTVEELD

>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV

Query: 3 WQTVEELD 10
W+ +EELD
Sbjct: 519 WRNIEELD 526


>sp|VG68_ICHVA|UNCHARACTERIZED protein ORF68|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 IWQTVEE 8
IW+T+EE
Sbjct: 168 IWETIEE 174


>sp|POLG_PPVEA|GENOME polyprotein|Plum pox potyvirus (strain El

Query: 2 IWQTVE 7
IWQTVE
Sbjct: 50 IWQTVE 55


>sp|GB_HSVA1|ENVELOPE glycoprotein B|Herpesvirus ateles type 1 (strain

Query: 3 WQTVEEL 9
WQ VEE+
Sbjct: 389 WQVVEEM 395


>sp|ORFC_ELHVK|PROTEIN ORF C|Elephantid herpesvirus 1 (isolate Asian

Query: 3 WQTVEE 8
W+TVEE
Sbjct: 666 WETVEE 671


>sp|L_BEFVB|RNA-DIRECTED RNA polymerase L|Bovine ephemeral fever virus (strain

Query: 3 WQTVEELD 10
WQ EELD
Sbjct: 753 WQNEEELD 760


>sp|MVP_SBMVG|P3N-PIPO polyprotein|Soybean mosaic virus (strain G2)

Query: 1 AIWQTVEELD 10
A W+T +E+D
Sbjct: 392 AEWETFQEID 401


>sp|GB_SHV1|ENVELOPE glycoprotein B|Saimiriine herpesvirus 1 (strain MV-5-4-PSL)

Query: 3 WQTVEEL 9
WQ VEE+
Sbjct: 380 WQEVEEM 386


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 3 WQTVEELD 10
WQ +EEL+
Sbjct: 28 WQEIEELE 35


>sp|MVP_SBMVN|P3N-PIPO polyprotein|Soybean mosaic virus (strain N)

Query: 3 WQTVEELD 10
W+T +E+D
Sbjct: 394 WETFQEID 401


>sp|UDPE_NPVSL|ECDYSTEROID UDP-glucosyltransferase|Spodoptera littoralis nuclear polyhedrosis

Query: 1 AIWQTVEEL 9
++WQTV ++
Sbjct: 200 SVWQTVRQV 208


>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 4 QTVEELD 10
+TVEELD
Sbjct: 1548 ETVEELD 1554


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 1 AIWQTVEELD 10
A W+T +E+D
Sbjct: 392 AEWETFQEID 401


>sp|VE6_HPV32|PROTEIN E6|Human papillomavirus type 32

Query: 1 AIWQTVEE 8
A W TVE+
Sbjct: 84 AFWHTVEQ 91


>sp|CIRCN_BPMU|DNA circularization protein N|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 AIWQTVEE 8
++WQTV++
Sbjct: 172 SVWQTVKD 179


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 3 WQTVEELD 10
W+T +E+D
Sbjct: 394 WETFQEID 401


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 3 WQTVEELD 10
W+T+ ELD
Sbjct: 1928 WKTLGELD 1935


>sp|VE6_HPV54|PROTEIN E6|Human papillomavirus type 54

Query: 2 IWQTVEE 8
+W+TVE+
Sbjct: 86 LWETVEQ 92




139|Sequence|691|700|VEELDYLEVE

>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 EELDYLE 8
E+LDY+E
Sbjct: 217 EQLDYIE 223


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 EELDYLE 8
E+LDY+E
Sbjct: 217 EQLDYIE 223


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)

Query: 2 EELDYLE 8
E+LDY+E
Sbjct: 217 EQLDYIE 223


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 EELDYLE 8
E+LDY+E
Sbjct: 217 EQLDYIE 223


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 EELDYLE 8
E+LDY+E
Sbjct: 217 EQLDYIE 223


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 EELDYLE 8
E+LDY+E
Sbjct: 217 EQLDYIE 223


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 EELDYLE 8
E+LDY+E
Sbjct: 217 EQLDYIE 223


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 EELDYLE 8
E+LDY+E
Sbjct: 217 EQLDYIE 223




140|Sequence|696|705|YLEVEAEAKM

>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 YLEVEAEAK 9
YL EAEAK
Sbjct: 457 YLRAEAEAK 465


>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13

Query: 1 YLEVEAEAK 9
YLE E EAK
Sbjct: 168 YLEFEKEAK 176




141|Sequence|701|710|AEAKMENLRA

>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1 AEAKMENL 8
AEA MENL
Sbjct: 752 AEAAMENL 759


>sp|TRM1_SHV21|TRIPARTITE terminase subunit 1|Saimiriine herpesvirus 2 (strain 11)

Query: 2 EAKMENLR 9
EAKM+N R
Sbjct: 305 EAKMQNYR 312




142|Sequence|706|715|ENLRAAVPGQ

>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)

Query: 3 LRAAVPG 9
LRAAVPG
Sbjct: 694 LRAAVPG 700




143|Sequence|711|720|AVPGQPLALT

>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 1 AVPGQPL 7
AVPGQPL
Sbjct: 1834 AVPGQPL 1840


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 1 AVPGQPL 7
AVPGQPL
Sbjct: 1835 AVPGQPL 1841


>sp|FIBER_BPK1F|TAIL spike protein|Escherichia phage K1F (Bacteriophage K1F)

Query: 2 VPGQPL 7
+PGQPL
Sbjct: 299 IPGQPL 304


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 1 AVPGQPLALT 10
AVPG P+ +T
Sbjct: 404 AVPGVPVVIT 413


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 1 AVPGQPLALT 10
AVPG P+ +T
Sbjct: 404 AVPGVPVVIT 413


>sp|E27_NPVAC|OCCLUSION-DERIVED virus envelope protein E27|Autographa californica nuclear

Query: 1 AVPGQPLALT 10
++PG+P+ T
Sbjct: 117 SIPGEPILFT 126


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 AVPGQPLALT 10
AVPG+P L+
Sbjct: 230 AVPGRPNGLS 239


>sp|OE27_NPVOP|OCCLUSION-DERIVED virus envelope protein E27|Orgyia pseudotsugata multicapsid

Query: 2 VPGQPLALT 10
+PG+P+ T
Sbjct: 118 IPGEPILFT 126




144|Sequence|716|725|PLALTARGGP

***** No hits found ******


145|Sequence|721|730|ARGGPKDTQP

>sp|NS1_BMDNV|INITIATOR protein NS1|Bombyx mori densovirus (BmDNV) (Bombyx

Query: 1 ARGGPKDTQP 10
A GP TQP
Sbjct: 404 AEAGPSGTQP 413


>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate

Query: 1 ARGGPKDTQP 10
A GG K+ QP
Sbjct: 351 ATGGDKEDQP 360


>sp|ATI_CAMPS|A-TYPE inclusion protein A25 homolog|Camelpox virus (strain CMS)

Query: 1 ARGGPKDTQP 10
A GG K+ QP
Sbjct: 351 ATGGDKEDQP 360


>sp|ATI_CAMPM|A-TYPE inclusion protein A25 homolog|Camelpox virus (strain M-96)

Query: 1 ARGGPKDTQP 10
A GG K+ QP
Sbjct: 351 ATGGDKEDQP 360


>sp|ATI_CAMPC|A-TYPE inclusion protein A25 homolog|Camelpox virus (strain CP-1)

Query: 1 ARGGPKDTQP 10
A GG K+ QP
Sbjct: 351 ATGGDKEDQP 360


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 2 RGGPKDT 8
RGGP++T
Sbjct: 12 RGGPRNT 18




146|Sequence|726|735|KDTQPSYHHG

>sp|50511_ASFK5|PROTEIN MGF 505-11L|African swine fever virus (isolate

Query: 3 TQPSYHH 9
T PSYHH
Sbjct: 105 TTPSYHH 111


>sp|50511_ASFWA|PROTEIN MGF 505-11L|African swine fever virus (isolate

Query: 3 TQPSYHH 9
T P YHH
Sbjct: 105 TTPKYHH 111


>sp|50511_ASFP4|PROTEIN MGF 505-11L|African swine fever virus (isolate

Query: 3 TQPSYHH 9
T P YHH
Sbjct: 105 TTPKYHH 111


>sp|50511_ASFB7|PROTEIN MGF 505-11L|African swine fever virus (strain

Query: 3 TQPSYHH 9
T P YHH
Sbjct: 105 TTPKYHH 111


>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus

Query: 1 KDTQPSYH 8
KD QP YH
Sbjct: 358 KDAQPPYH 365


>sp|VG10_EHV2|UNCHARACTERIZED gene 10 protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 DTQPSYHHG 10
DTQP HG
Sbjct: 243 DTQPEMVHG 251


>sp|SIGM1_REOVD|OUTER capsid protein sigma-1|Reovirus type 3 (strain Dearing)

Query: 2 DTQPSYHH 9
DT+P++H+
Sbjct: 382 DTEPAFHN 389


>sp|ARBH_FOWPN|APOPTOSIS regulator Bcl-2 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 KDTQPSYHHG 10
+DT P Y+ G
Sbjct: 102 QDTSPQYYDG 111


>sp|VL2_COPV6|MINOR capsid protein L2|Canine oral papillomavirus (strain Y62)

Query: 1 KDTQPSYHHG 10
K T+P+YH G
Sbjct: 326 KLTKPAYHRG 335


>sp|50511_ASFM2|PROTEIN MGF 505-11L|African swine fever virus (isolate

Query: 3 TQPSYHH 9
T P YHH
Sbjct: 105 TTPKYHH 111


>sp|W_NIPAV|PROTEIN W|Nipah virus

Query: 1 KDTQPSYH 8
KD QP YH
Sbjct: 358 KDAQPPYH 365


>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus

Query: 1 KDTQPSYH 8
KD QP YH
Sbjct: 358 KDAQPPYH 365


>sp|CAPSD_AQRVA|INNER capsid protein VP3|Aquareovirus A (isolate Chum

Query: 5 PSYHHG 10
PSYH+G
Sbjct: 829 PSYHYG 834


>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)

Query: 1 KDTQPSYHH 9
+DTQPS H+
Sbjct: 574 QDTQPSSHN 582


>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain

Query: 2 DTQPSYHH 9
DT P Y H
Sbjct: 286 DTNPGYKH 293


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2 DTQPSYH 8
DTQ +YH
Sbjct: 3495 DTQTTYH 3501


>sp|Y04O_BPT4|UNCHARACTERIZED 36.3 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 KDTQPSYHH 9
KDTQ +Y H
Sbjct: 48 KDTQNAYSH 56


>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate

Query: 2 DTQPSYHH 9
DTQ SY H
Sbjct: 350 DTQASYVH 357


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 5 PSYHHG 10
P+Y+HG
Sbjct: 1510 PTYYHG 1515


>sp|YL732_MIMIV|UNCHARACTERIZED protein L732|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 TQPSYHH 9
T+PS HH
Sbjct: 141 TEPSCHH 147




147|Sequence|731|740|SYHHGNGPYN

>sp|VG65_BPMD2|GENE 65 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 3 HHGNGPYN 10
HH GPYN
Sbjct: 152 HHVTGPYN 159


>sp|M11P_SCVM1|M1-1 protoxin|Saccharomyces cerevisiae killer virus M1

Query: 3 HHGNGPY 9
HHGNG Y
Sbjct: 213 HHGNGTY 219


>sp|VIE2_NPVCF|E3 ubiquitin-protein ligase IE2|Choristoneura fumiferana nuclear

Query: 4 HGNGPYN 10
HGN P+N
Sbjct: 82 HGNAPFN 88


>sp|VG50_BPMB2|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate

Query: 1 SYHHGNGPYN 10
++ HGNG Y+
Sbjct: 376 AFAHGNGSYD 385


>sp|POL1_BRSV|RNA1 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 2 YHHGNGPYN 10
+H GNG Y+
Sbjct: 578 HHKGNGKYS 586


>sp|PURZ_BPS2L|N6-SUCCINO-2-AMINO-2'-DEOXYADENYLATE synthase|Cyanophage S-2L (Cyanobacteria phage S-2L)

Query: 1 SYHHGNGPY 9
S HHG PY
Sbjct: 195 SVHHGAYPY 203


>sp|YO17_ADEG1|UNCHARACTERIZED protein ORF17|Fowl adenovirus A serotype 1

Query: 2 YHHGNGP 8
YHHG P
Sbjct: 96 YHHGKVP 102


>sp|TUBE_BPSK9|TAIL tube protein|Serratia phage KSP90 (Serratia marcescens

Query: 6 NGPYN 10
NGPYN
Sbjct: 89 NGPYN 93


>sp|GLYCO_KHUV|GLYCOPROTEIN virus (KHUV)

Query: 2 YHHGNGPY 9
YHH NG +
Sbjct: 371 YHHHNGVF 378


>sp|VG65_BPML5|GENE 65 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 3 HHGNGPYN 10
HH GP+N
Sbjct: 188 HHVTGPHN 195


>sp|REP_BPHC1|REPLICATION protein|Haemophilus phage HP1 (strain HP1c1)

Query: 1 SYHHGNG 7
S+H GNG
Sbjct: 404 SFHAGNG 410


>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain

Query: 3 HHGNGPYN 10
H+G GP N
Sbjct: 631 HYGVGPIN 638


>sp|YR699_MIMIV|UNCHARACTERIZED protein R699|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YHHGNGP 8
+ HGNGP
Sbjct: 214 FAHGNGP 220


>sp|VP5_BTV10|OUTER capsid protein VP5|Bluetongue virus 10 (isolate USA)

Query: 1 SYHHGNGPY 9
SYHH N +
Sbjct: 383 SYHHRNESF 391


>sp|POLN_ELV|NON-STRUCTURAL replication polyprotein|Erysimum latent virus (ELV)

Query: 2 YHHGNGPYN 10
YH GN P++
Sbjct: 1454 YHAGNTPHD 1462


>sp|Y004_OSHVF|UNCHARACTERIZED protein ORF4|Ostreid herpesvirus 1 (isolate France)

Query: 1 SYHHGNG 7
SY+ GNG
Sbjct: 251 SYYEGNG 257


>sp|TOP2_ASFB7|DNA topoisomerase 2|African swine fever virus (strain

Query: 2 YHHGNGPYN 10
YHHG+ N
Sbjct: 751 YHHGDMSLN 759


>sp|YL888_MIMIV|UNCHARACTERIZED protein L888|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YHHGNGPYN 10
Y H NG YN
Sbjct: 221 YKHDNGIYN 229


>sp|TOP2_ASFM2|DNA topoisomerase 2|African swine fever virus (isolate

Query: 2 YHHGNGPYN 10
YHHG+ N
Sbjct: 750 YHHGDMSLN 758


>sp|TOP2_ASFP4|DNA topoisomerase 2|African swine fever virus (isolate

Query: 2 YHHGNGPYN 10
YHHG+ N
Sbjct: 751 YHHGDMSLN 759


>sp|TOP2_ASFK5|DNA topoisomerase 2|African swine fever virus (isolate

Query: 2 YHHGNGPYN 10
YHHG+ N
Sbjct: 751 YHHGDMSLN 759


>sp|TOP2_ASFWA|DNA topoisomerase 2|African swine fever virus (isolate

Query: 2 YHHGNGPYN 10
YHHG+ N
Sbjct: 751 YHHGDMSLN 759




148|Sequence|736|745|NGPYNDVDIP

>sp|TLP20_NPVOP|TELOKIN-LIKE protein 20 homolog|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 NGPYNDV 7
NGPYN++
Sbjct: 57 NGPYNEI 63


>sp|DNBI_EHV2|MAJOR DNA-binding protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 GPYNDVDI 9
G YND+DI
Sbjct: 503 GAYNDLDI 510


>sp|TUBE_BPSK9|TAIL tube protein|Serratia phage KSP90 (Serratia marcescens

Query: 1 NGPYNDVDI 9
NGPYN +++
Sbjct: 89 NGPYNSMEV 97


>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 PYNDVDI 9
PY D+DI
Sbjct: 324 PYQDIDI 330


>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain AD169)

Query: 3 PYNDVDI 9
PY D+DI
Sbjct: 322 PYQDIDI 328


>sp|M35_MUHVK|PROTEIN M35|Murid herpesvirus 1 (strain K181)

Query: 1 NGPYNDVDI 9
N PYND +I
Sbjct: 377 NNPYNDQNI 385


>sp|ENLYS_BPP21|SAR-ENDOLYSIN phage P21 (Bacteriophage 21)

Query: 3 PYNDVDIP 10
PY VDIP
Sbjct: 88 PYIKVDIP 95


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 2 GPYND 6
GPYND
Sbjct: 1788 GPYND 1792


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 3 PYNDVDIP 10
PY D D+P
Sbjct: 664 PYTDGDVP 671


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1 NGPYND 6
NGPY D
Sbjct: 1638 NGPYTD 1643


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 3 PYNDVDIP 10
PY D D+P
Sbjct: 664 PYTDGDVP 671


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 3 PYNDVDIP 10
PY D D+P
Sbjct: 664 PYTDGDVP 671


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 3 PYNDVDIP 10
PY D D+P
Sbjct: 664 PYTDGDVP 671


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 3 PYNDVDIP 10
PY D D+P
Sbjct: 664 PYTDGDVP 671


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 3 PYNDVDIP 10
PY D D+P
Sbjct: 664 PYTDGDVP 671


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 3 PYNDVDIP 10
PY D D+P
Sbjct: 664 PYTDGDVP 671


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 3 PYNDVDIP 10
PY D D+P
Sbjct: 664 PYTDGDVP 671


>sp|RDRP_BBV|RNA-DIRECTED RNA polymerase|Black beetle virus (BBV)

Query: 1 NGPYNDVD 8
NGP+ D+D
Sbjct: 468 NGPFKDLD 475


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 3 PYNDVDIP 10
PY D D+P
Sbjct: 664 PYTDGDVP 671


>sp|ENLYS_BPPS3|SAR-ENDOLYSIN PS34

Query: 3 PYNDVDIP 10
PY VDIP
Sbjct: 90 PYIKVDIP 97


>sp|ENLYS_BPPS1|SAR-ENDOLYSIN PS119

Query: 3 PYNDVDIP 10
PY VDIP
Sbjct: 90 PYIKVDIP 97


>sp|RDRP_FHV|RNA-DIRECTED RNA polymerase|Flock house virus (FHV)

Query: 1 NGPYNDVD 8
NGP+ D+D
Sbjct: 468 NGPFKDLD 475


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 GPYND 6
GPYND
Sbjct: 1788 GPYND 1792


>sp|ENLYS_BPPA2|SAR-ENDOLYSIN phage PA-2 (Bacteriophage PA-2)

Query: 3 PYNDVDIP 10
PY VDIP
Sbjct: 88 PYIKVDIP 95


>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 NGPYNDVDI 9
+G YND+D+
Sbjct: 494 SGQYNDLDM 502


>sp|VG65_BPML5|GENE 65 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 GPYNDVDIP 10
GP+ND D P
Sbjct: 192 GPHNDGDKP 200


>sp|GB_EHV2|ENVELOPE glycoprotein B|Equine herpesvirus 2 (strain 86/87)

Query: 1 NGPYNDVDI 9
+G Y+DVD+
Sbjct: 857 DGGYDDVDV 865


>sp|VG65_BPMD2|GENE 65 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 NGPYNDVD 8
GPYND D
Sbjct: 155 TGPYNDGD 162


>sp|YL909_MIMIV|UNCHARACTERIZED protein L909|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NGPYN 5
NGPYN
Sbjct: 154 NGPYN 158


>sp|VP4_BTV13|CORE protein VP4|Bluetongue virus 13 (isolate USA)

Query: 1 NGPYNDVDI 9
NG Y D+ I
Sbjct: 459 NGSYRDISI 467




149|Sequence|741|750|DVDIPGCWFF

>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 DIPGCW 8
D+PGCW
Sbjct: 566 DLPGCW 571


>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 DIPGCW 8
D+PGCW
Sbjct: 566 DLPGCW 571


>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 DIPGCW 8
D+PGCW
Sbjct: 566 DLPGCW 571


>sp|RDRP_BTV10|RNA-DIRECTED RNA polymerase|Bluetongue virus 10 (isolate USA)

Query: 3 DIPGCW 8
DIP CW
Sbjct: 963 DIPPCW 968


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 DVDIPGCW 8
D+D+PG W
Sbjct: 527 DMDLPGRW 534


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 2 VDIPGCWFF 10
V+IPGC F+
Sbjct: 1895 VNIPGCPFY 1903


>sp|HEPA_EHV1V|DNA helicase/primase complex-associated protein|Equine herpesvirus 1

Query: 4 IPGCW 8
+PGCW
Sbjct: 47 VPGCW 51


>sp|HEPA_EHV1B|DNA helicase/primase complex-associated protein|Equine herpesvirus 1

Query: 4 IPGCW 8
+PGCW
Sbjct: 47 VPGCW 51


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 DVDIPGCW 8
DV++PG W
Sbjct: 518 DVNLPGKW 525


>sp|IORF_CVRSD|PROTEIN I|Rat coronavirus (strain 681) (RCV-SDAV)

Query: 4 IPGCWF 9
IPG WF
Sbjct: 37 IPGVWF 42


>sp|IORF_CVMS|PROTEIN I|Murine coronavirus (strain S) (MHV-S)

Query: 4 IPGCWF 9
IPG WF
Sbjct: 37 IPGVWF 42


>sp|IORF_CVMJH|PROTEIN I|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 4 IPGCWF 9
IPG WF
Sbjct: 37 IPGVWF 42


>sp|IORF_CVM1|PROTEIN I|Murine coronavirus (strain 1) (MHV-1)

Query: 4 IPGCWF 9
IPG WF
Sbjct: 37 IPGVWF 42


>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P

Query: 1 DVDIPGCW 8
D D+P CW
Sbjct: 3 DEDVPVCW 10


>sp|NSP4_RDVF|NON-STRUCTURAL protein 4|Rice dwarf virus (isolate Fujian)

Query: 1 DVDIPGCWFF 10
D D P CW
Sbjct: 308 DDDCPTCWIL 317


>sp|NSP4_RDVA|NON-STRUCTURAL protein 4|Rice dwarf virus (isolate Akita)

Query: 1 DVDIPGCWFF 10
D D P CW
Sbjct: 308 DDDCPTCWIL 317


>sp|SPI1_VACCW|SERINE proteinase inhibitor 1|Vaccinia virus (strain Western Reserve)

Query: 1 DVDIPGC 7
DVDIP C
Sbjct: 61 DVDIPYC 67


>sp|SPI1_VACCC|SERINE proteinase inhibitor 1|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 DVDIPGC 7
DVDIP C
Sbjct: 61 DVDIPYC 67


>sp|DPOL_BPT5|DNA polymerase|Escherichia phage T5 (Enterobacteria phage

Query: 1 DVDIPGCWFF 10
DV +PGC F
Sbjct: 343 DVLMPGCVFL 352


>sp|KITH_EHV2|THYMIDINE kinase|Equine herpesvirus 2 (strain 86/87)

Query: 3 DIPGCW 8
DIPG W
Sbjct: 576 DIPGVW 581


>sp|KITH_SHV21|THYMIDINE kinase|Saimiriine herpesvirus 2 (strain 11)

Query: 3 DIPGCW 8
DIPG W
Sbjct: 489 DIPGLW 494


>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)

Query: 5 PGCW 8
PGCW
Sbjct: 574 PGCW 577


>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 5 PGCW 8
PGCW
Sbjct: 568 PGCW 571


>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)

Query: 5 PGCW 8
PGCW
Sbjct: 574 PGCW 577


>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great

Query: 5 PGCW 8
PGCW
Sbjct: 568 PGCW 571


>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)

Query: 5 PGCW 8
PGCW
Sbjct: 580 PGCW 583


>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann

Query: 5 PGCW 8
PGCW
Sbjct: 581 PGCW 584


>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 5 PGCW 8
PGCW
Sbjct: 568 PGCW 571


>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)

Query: 5 PGCW 8
PGCW
Sbjct: 568 PGCW 571


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 DVDIPGCW 8
++D+PG W
Sbjct: 520 EIDLPGKW 527


>sp|NCAP_CVCBG|NUCLEOPROTEIN coronavirus (strain BGF10) (CCoV)

Query: 3 DIPGCWFF 10
D+P WFF
Sbjct: 85 DLPERWFF 92


>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)

Query: 5 PGCW 8
PGCW
Sbjct: 568 PGCW 571


>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)

Query: 5 PGCW 8
PGCW
Sbjct: 568 PGCW 571


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 5 PGCW 8
PGCW
Sbjct: 567 PGCW 570


>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)

Query: 5 PGCW 8
PGCW
Sbjct: 567 PGCW 570


>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)

Query: 5 PGCW 8
PGCW
Sbjct: 567 PGCW 570


>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 5 PGCW 8
PGCW
Sbjct: 581 PGCW 584


>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)

Query: 5 PGCW 8
PGCW
Sbjct: 568 PGCW 571


>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73

Query: 1 DVDIPGCWFF 10
D PGCW +
Sbjct: 523 DDATPGCWTY 532


>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 5 PGCW 8
PGCW
Sbjct: 567 PGCW 570


>sp|KITH_ALHV1|THYMIDINE kinase|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 DIPGCW 8
D+PG W
Sbjct: 518 DVPGAW 523


>sp|KITH_AHV1W|THYMIDINE kinase|Alcelaphine herpesvirus 1 (strain WC11)

Query: 3 DIPGCW 8
D+PG W
Sbjct: 516 DVPGAW 521


>sp|VF198_IIV3|UNCHARACTERIZED protein 069L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 VDIPGCWF 9
+ +PG WF
Sbjct: 137 ISVPGTWF 144


>sp|NCAP_BC512|NUCLEOPROTEIN coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 VDIPGCWFF 10
VD+P W F
Sbjct: 69 VDLPSNWHF 77


>sp|YO14_BPHC1|UNCHARACTERIZED 14.9 kDa protein in|Haemophilus phage HP1 (strain HP1c1)

Query: 3 DIPGCW 8
D+PGC+
Sbjct: 20 DVPGCF 25


>sp|DPOL_HVAVE|DNA polymerase|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 2 VDIPGC 7
+D+PGC
Sbjct: 347 LDVPGC 352


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1 DVDIPGCWF 9
D D+P C F
Sbjct: 278 DSDVPSCPF 286


>sp|TOPL_BPT4|DNA topoisomerase large subunit|Enterobacteria phage T4 (Bacteriophage

Query: 3 DIPGCW 8
DIPG W
Sbjct: 173 DIPGKW 178


>sp|5054R_ASFM2|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 4 IPGCWFF 10
I GC+FF
Sbjct: 240 IKGCFFF 246


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 DVDIPG 6
DVD+PG
Sbjct: 571 DVDLPG 576


>sp|MCP_GAHVM|MAJOR capsid protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 DVDIPG 6
DVD+PG
Sbjct: 571 DVDLPG 576


>sp|SPIN_CBEPV|SPINDOLIN biennis entomopoxvirus (CbEPV)

Query: 2 VDIPGCW 8
+D+PG W
Sbjct: 132 MDLPGSW 138


>sp|VG02_ICHVA|UNCHARACTERIZED protein ORF2|Ictalurid herpesvirus 1 (strain Auburn)

Query: 5 PGCWF 9
P CWF
Sbjct: 222 PHCWF 226


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 4 IPGCWFF 10
+P CW+
Sbjct: 320 VPSCWWL 326


>sp|RDRP_AQRVG|RNA-DIRECTED RNA polymerase VP2|Aquareovirus G (isolate American grass

Query: 2 VDIPGCW 8
+D+PG W
Sbjct: 1021 MDVPGKW 1027


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 4 IPGCWFF 10
+P CW+
Sbjct: 320 VPSCWWL 326


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 4 IPGCWFF 10
+P CW+
Sbjct: 320 VPSCWWL 326


>sp|GLYC_IPPYV|PRE-GLYCOPROTEIN polyprotein GP complex|Ippy mammarenavirus (isolate Rat/Central

Query: 2 VDIPGCW 8
V +P CW
Sbjct: 384 VSLPKCW 390


>sp|LTP_GAHVM|LARGE tegument protein deneddylase|Gallid herpesvirus 2 (strain

Query: 1 DVDIPGC 7
++D PGC
Sbjct: 2008 EIDSPGC 2014




150|Sequence|746|755|GCWFFKLPHK

>sp|NDD_BPR70|NUCLEOID disruption protein|Enterobacteria phage RB70 (Bacteriophage RB70)

Query: 1 GCWFFKLPHK 10
G WF PHK
Sbjct: 23 GEWFLGTPHK 32


>sp|NDD_BPR69|NUCLEOID disruption protein|Escherichia phage RB69 (Bacteriophage RB69)

Query: 1 GCWFFKLPHK 10
G WF PHK
Sbjct: 23 GEWFLGTPHK 32


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 4 FFKLPH 9
FFKLPH
Sbjct: 1162 FFKLPH 1167


>sp|NDD_BPT2|NUCLEOID disruption protein|Enterobacteria phage T2 (Bacteriophage T2)

Query: 1 GCWFFKLPHK 10
G WF PHK
Sbjct: 23 GEWFLGTPHK 32


>sp|NDD_BPR32|NUCLEOID disruption protein|Enterobacteria phage RB32 (Bacteriophage RB32)

Query: 1 GCWFFKLPHK 10
G WF PHK
Sbjct: 23 GEWFLGTPHK 32


>sp|NDD_BPK3|NUCLEOID disruption protein|Enterobacteria phage K3 (Bacteriophage K3)

Query: 1 GCWFFKLPHK 10
G WF PHK
Sbjct: 23 GEWFLGTPHK 32


>sp|NDD_BPT4|NUCLEOID disruption protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 GCWFFKLPHK 10
G WF PHK
Sbjct: 23 GEWFLGTPHK 32


>sp|NDD_BPT6|NUCLEOID disruption protein|Enterobacteria phage T6 (Bacteriophage T6)

Query: 1 GCWFFKLPHK 10
G WF PHK
Sbjct: 23 GEWFLGTPHK 32


>sp|TMP_BPPCD|PROBABLE tape measure protein|Clostridium phage phiCD119 (strain Clostridium

Query: 1 GCWFFKLPHK 10
G WF +LP K
Sbjct: 634 GVWFGQLPAK 643


>sp|GLYCO_SYNV|SPIKE glycoprotein|Sonchus yellow net virus (SYNV)

Query: 3 WFFKLPH 9
WF+KLP+
Sbjct: 229 WFWKLPN 235


>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)

Query: 1 GCWFFKL 7
G WF+KL
Sbjct: 152 GAWFYKL 158


>sp|POLS_BSNV|STRUCTURAL polyprotein|Blotched snakehead virus (BSNV) (Channa

Query: 3 WFFKLP 8
W FKLP
Sbjct: 546 WLFKLP 551


>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)

Query: 1 GCWFFKL 7
G WF+KL
Sbjct: 155 GSWFYKL 161


>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)

Query: 1 GCWFFKL 7
G WF+KL
Sbjct: 155 GSWFYKL 161


>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 GCWFFKL 7
G WF+KL
Sbjct: 155 GSWFYKL 161


>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain

Query: 1 GCWFFKLPHK 10
G FF+ PH+
Sbjct: 1383 GAGFFQTPHR 1392


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 1 GCWFFKLPH 9
GC+ + +PH
Sbjct: 195 GCFLYFIPH 203


>sp|VP6_MYRV9|MICROTUBULE-ASSOCIATED protein VP6|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 3 WFFKLPH 9
WF K+P+
Sbjct: 536 WFLKVPY 542


>sp|GTRB_BPSFX|BACTOPRENOL glucosyl transferase|Shigella phage SfX (Shigella flexneri

Query: 3 WFFKLPHK 10
WF+KL +K
Sbjct: 136 WFYKLHNK 143


>sp|GTRB_BPSF5|BACTOPRENOL glucosyl transferase|Shigella phage SfV (Shigella flexneri

Query: 3 WFFKLPHK 10
WF+KL +K
Sbjct: 136 WFYKLHNK 143


>sp|GTRB_BPSF2|BACTOPRENOL glucosyl transferase|Shigella phage SfII (Shigella flexneri

Query: 3 WFFKLPHK 10
WF+KL +K
Sbjct: 136 WFYKLHNK 143


>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus

Query: 3 WFFKLPHK 10
W F PHK
Sbjct: 986 WDFHTPHK 993


>sp|GTRB_BPP22|BACTOPRENOL glucosyl transferase|Salmonella phage P22 (Bacteriophage P22)

Query: 3 WFFKLPHK 10
WF+KL +K
Sbjct: 136 WFYKLHNK 143


>sp|MCP_RTRV|MAJOR capsid protein|Rana tigrina ranavirus

Query: 3 WFFKLP 8
WF KLP
Sbjct: 45 WFTKLP 50


>sp|MCP_FRG3G|MAJOR capsid protein|Frog virus 3 (isolate Goorha)

Query: 3 WFFKLP 8
WF KLP
Sbjct: 45 WFTKLP 50


>sp|YVAC_VACCC|UNCHARACTERIZED 14.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GCWFFKL 7
G WFF L
Sbjct: 17 GIWFFTL 23


>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)

Query: 3 WFFKLP 8
W++KLP
Sbjct: 147 WYWKLP 152


>sp|MCP_LCDV1|MAJOR capsid protein|Lymphocystis disease virus 1 (isolate

Query: 3 WFFKLP 8
WF KLP
Sbjct: 45 WFSKLP 50


>sp|EV167_ASFWA|ENVELOPE protein 167|African swine fever virus (isolate

Query: 1 GCWFFKLPH 9
C+F++ PH
Sbjct: 150 NCYFYRNPH 158


>sp|POL2_TOTV|RNA2 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 GCWFFKLPH 9
G FF +PH
Sbjct: 97 GVMFFMVPH 105


>sp|GLYC_PIRVV|PRE-GLYCOPROTEIN polyprotein GP complex|Pirital mammarenavirus (isolate

Query: 2 CWFFKLPHK 10
C F+K+P K
Sbjct: 493 CGFYKIPKK 501


>sp|5054R_ASFM2|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 1 GCWFFKL 7
GC+FF L
Sbjct: 242 GCFFFML 248


>sp|YO04_BPHC1|UNCHARACTERIZED 8.9 kDa protein in|Haemophilus phage HP1 (strain HP1c1)

Query: 2 CWFFKL 7
C+FFKL
Sbjct: 2 CFFFKL 7


>sp|5054R_ASFB7|PROTEIN MGF 505-4R|African swine fever virus (strain

Query: 1 GCWFFKL 7
GC+FF L
Sbjct: 242 GCFFFML 248


>sp|EV162_ASFM2|PUTATIVE membrane protein 162|African swine fever virus (isolate

Query: 2 CWFFKLPH 9
C+F+ PH
Sbjct: 140 CYFYTNPH 147


>sp|PP_LAMBD|SERINE/THREONINE-PROTEIN phosphatase|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 GCWFFKLPH 9
G WFF L +
Sbjct: 98 GGWFFNLDY 106




151|Sequence|751|760|KLPHKDGNSC

>sp|1A_AMV|REPLICATION protein 1a|Alfalfa mosaic virus (AMV)

Query: 1 KLPHKDGNSC 10
K+PH +G SC
Sbjct: 315 KMPHSNGRSC 324


>sp|KU_BPMCO|PROTEIN Ku|Mycobacterium phage Corndog (Mycobacteriophage Corndog)

Query: 3 PHKDGN 8
PH+DGN
Sbjct: 36 PHEDGN 41


>sp|HELIC_BPT3|DNA helicase/primase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 2 LPHKDGNSC 10
LP KD N C
Sbjct: 232 LPCKDANEC 240


>sp|REP_MSVSE|REPLICATION-ASSOCIATED protein|Maize streak virus genotype C

Query: 4 HKDGNSC 10
H+DGN C
Sbjct: 54 HRDGNQC 60


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 KLPHKDG 7
KLPHK G
Sbjct: 46 KLPHKRG 52


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 1 KLPHKDG 7
KLPHK G
Sbjct: 46 KLPHKRG 52


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 KLPHKDG 7
KLPHK G
Sbjct: 46 KLPHKRG 52


>sp|REPA_MSVSE|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype C

Query: 4 HKDGNSC 10
H+DGN C
Sbjct: 54 HRDGNQC 60


>sp|HELIC_BPT7|DNA helicase/primase|Escherichia phage T7 (Bacteriophage T7)

Query: 2 LPHKDGNSC 10
LP KD N C
Sbjct: 233 LPCKDANEC 241


>sp|PG040_VACCW|SUPERINFECTION exclusion protein|Vaccinia virus (strain Western Reserve)

Query: 1 KLPHKDGN 8
+LP+KD N
Sbjct: 221 RLPYKDAN 228


>sp|PG040_VACCC|SUPERINFECTION exclusion protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 KLPHKDGN 8
+LP+KD N
Sbjct: 221 RLPYKDAN 228


>sp|PG040_VACCA|SUPERINFECTION exclusion protein|Vaccinia virus (strain Ankara) (VACV)

Query: 1 KLPHKDGN 8
+LP+KD N
Sbjct: 221 RLPYKDAN 228


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1 KLPHKDG 7
KLPHK G
Sbjct: 1437 KLPHKPG 1443


>sp|REP_BPHC1|REPLICATION protein|Haemophilus phage HP1 (strain HP1c1)

Query: 3 PHKDG 7
PHKDG
Sbjct: 452 PHKDG 456


>sp|NSP3_ROTPC|NON-STRUCTURAL protein 3|Rotavirus C (strain RVC/Pig/United States/Cowden/1980)

Query: 5 KDGNSC 10
+DGNSC
Sbjct: 195 RDGNSC 200


>sp|CAPSD_AAV2S|CAPSID protein VP1|Adeno-associated virus 2 (isolate Srivastava/1982)

Query: 1 KLPHKDGN 8
K+PH DG+
Sbjct: 620 KIPHTDGH 627


>sp|TFLIV_BPT5|H-N-H endonuclease F-TflIV|Escherichia phage T5 (Enterobacteria phage

Query: 1 KLPHKDGN 8
+L HKDGN
Sbjct: 106 ELEHKDGN 113


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 3 PHKDGNSC 10
PH G SC
Sbjct: 1717 PHVPGTSC 1724


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 3 PHKDGNSC 10
PH G SC
Sbjct: 1717 PHVPGTSC 1724




152|Sequence|756|765|DGNSCNVGSP

>sp|CAPSD_BPPM2|MAJOR capsid protein P2|Pseudoalteromonas phage PM2 (Bacteriophage PM2)

Query: 2 GNSCNVGSP 10
GNSC++ P
Sbjct: 16 GNSCSIKLP 24


>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United

Query: 1 DGNSCNVGS 9
DGNSC+ S
Sbjct: 196 DGNSCSYNS 204


>sp|FUS_AMPV1|FUSION glycoprotein F0|Avian metapneumovirus (isolate Canada

Query: 1 DGNSCNVGS 9
DG SC++GS
Sbjct: 386 DGVSCSIGS 394


>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 DGNSCNVGSP 10
DG+ CN SP
Sbjct: 216 DGDGCNTPSP 225


>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)

Query: 1 DGNSCNVGSP 10
DG+ CN SP
Sbjct: 216 DGDGCNTPSP 225


>sp|NSP3_ROTPC|NON-STRUCTURAL protein 3|Rotavirus C (strain RVC/Pig/United States/Cowden/1980)

Query: 1 DGNSCNVGS 9
DGNSC+ S
Sbjct: 196 DGNSCSYNS 204


>sp|YR304_MIMIV|UNCHARACTERIZED protein R304|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DGNSCN 6
DGN CN
Sbjct: 106 DGNLCN 111




153|Sequence|761|770|NVGSPFAKDF

>sp|289L_IIV6|PUTATIVE Bro-N domain-containing protein 289L|Invertebrate iridescent virus

Query: 4 SPFAKDF 10
+PFAKDF
Sbjct: 112 APFAKDF 118


>sp|EXLYS_BPT7|PEPTIDOGLYCAN transglycosylase gp16|Escherichia phage T7 (Bacteriophage T7)

Query: 5 PFAKDF 10
PFAKDF
Sbjct: 205 PFAKDF 210


>sp|VINT_BP186|INTEGRASE phage 186 (Bacteriophage 186)

Query: 2 VGSPFAKDF 10
+G P A+DF
Sbjct: 89 MGEPLARDF 97


>sp|CAPS3_MIMIV|PROBABLE capsid protein 3|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NVGSPFAKDF 10
N+G+ F KDF
Sbjct: 253 NLGNNFGKDF 262


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 GSPFAKDF 10
GSP+ +DF
Sbjct: 5487 GSPYIEDF 5494


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 GSPFAKDF 10
GSP+ +DF
Sbjct: 5481 GSPYIEDF 5488


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 3 GSPFAKDF 10
GSP+ +DF
Sbjct: 5429 GSPYIEDF 5436


>sp|EXLYS_BPDPK|PEPTIDOGLYCAN hydrolase gp181|Pseudomonas phage phiKZ

Query: 2 VGSPFAKDF 10
+GSPF K F
Sbjct: 1172 LGSPFKKRF 1180


>sp|028R_FRG3G|UNCHARACTERIZED protein 028R|Frog virus 3 (isolate Goorha)

Query: 2 VGSPFAKDF 10
VG+PF K F
Sbjct: 52 VGAPFIKAF 60




154|Sequence|766|775|FAKDFLPKME

>sp|TUBE_BPF41|TAIL tube protein|Lactococcus phage F4-1 (Lactococcus lactis

Query: 2 AKDFLPKME 10
AKDF+ KME
Sbjct: 195 AKDFVKKME 203


>sp|YR528_MIMIV|PUTATIVE 5'-3' exonuclease R528|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FAKDFLPKME 10
F DF+PK+E
Sbjct: 183 FGNDFVPKIE 192


>sp|TUBE_BPLSK|TAIL tube protein|Lactococcus phage SK1 (Lactococcus lactis

Query: 2 AKDFLPKME 10
AKDF KME
Sbjct: 195 AKDFAKKME 203


>sp|TUBE_BPLP2|TAIL tube protein|Lactococcus phage p2 (Lactococcus lactis

Query: 2 AKDFLPKME 10
AKDF KME
Sbjct: 195 AKDFAKKME 203


>sp|VP4_AQRVC|OUTER capsid protein VP4|Aquareovirus C (isolate Golden

Query: 1 FAKDFLP 7
FAKD LP
Sbjct: 189 FAKDILP 195


>sp|NEC1_EHV2|NUCLEAR egress protein 1|Equine herpesvirus 2 (strain 86/87)

Query: 1 FAKDFLPKME 10
F KDFL +M+
Sbjct: 72 FGKDFLREMD 81


>sp|RPC1_BPP22|TRANSCRIPTIONAL activator protein C1|Salmonella phage P22 (Bacteriophage P22)

Query: 4 DFLPKM 9
DF+PKM
Sbjct: 46 DFIPKM 51


>sp|POL_CAMVE|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain BBC)

Query: 1 FAKDFLPKM 9
+A D++PK+
Sbjct: 489 YASDYIPKL 497


>sp|POL_CERV|ENZYMATIC polyprotein|Carnation etched ring virus (CERV)

Query: 1 FAKDFLPKM 9
+A D++PK+
Sbjct: 473 YASDYIPKL 481




155|Sequence|771|780|LPKMEDGTLQ

>sp|VF161_IIV6|PUTATIVE helicase 161L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 LPKMEDGTLQ 10
+PKME G L+
Sbjct: 177 IPKMEQGFLE 186


>sp|NSP3_ROTB2|NON-STRUCTURAL protein 3|Rotavirus X (isolate

Query: 1 LPKMEDGTLQ 10
LPK+ DG L+
Sbjct: 130 LPKIPDGLLE 139


>sp|NSP3_ROTJ1|NON-STRUCTURAL protein 3|Rotavirus X (strain

Query: 1 LPKMEDGTLQ 10
LPK+ DG L+
Sbjct: 130 LPKIPDGLLE 139


>sp|GLYCO_SVCV|GLYCOPROTEIN viremia of carp virus

Query: 1 LPKMEDGTL 9
+PK DGTL
Sbjct: 268 VPKCVDGTL 276




156|Sequence|776|785|DGTLQAGPGG

>sp|RDRP_GGNNV|RNA-DIRECTED RNA polymerase|Greasy grouper nervous necrosis virus

Query: 1 DGTLQAGP 8
DG +QAGP
Sbjct: 877 DGEIQAGP 884


>sp|RDRP_AHNNV|RNA-DIRECTED RNA polymerase|Atlantic halibut nervous necrosis virus

Query: 1 DGTLQAGP 8
DG +QAGP
Sbjct: 877 DGEVQAGP 884


>sp|RDRP_SJNNV|RNA-DIRECTED RNA polymerase|Striped jack nervous necrosis virus

Query: 1 DGTLQAGP 8
DG +QAGP
Sbjct: 877 DGEVQAGP 884


>sp|RDRP_CPMV1|RNA-DIRECTED RNA polymerase|Cryphonectria parasitica mitovirus 1 (strain

Query: 2 GTLQAGPGG 10
G+++AGP G
Sbjct: 252 GSMKAGPNG 260


>sp|POL2_RCMV|RNA2 polyprotein|Red clover mottle virus (RCMV)

Query: 2 GTLQAGP 8
G+LQAGP
Sbjct: 987 GSLQAGP 993


>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain

Query: 1 DGTLQAG 7
DGT+QAG
Sbjct: 201 DGTVQAG 207


>sp|UL32_EHV1B|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 DGTLQAGPGG 10
DG LQA P G
Sbjct: 245 DGALQAVPHG 254


>sp|UL32_EHV1A|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain AB1)

Query: 1 DGTLQAGPGG 10
DG LQA P G
Sbjct: 245 DGALQAVPHG 254


>sp|HEMA_I63A2|HEMAGGLUTININ A virus (strain A/Equine/Miami/1/1963

Query: 1 DGTLQAG 7
+GTLQAG
Sbjct: 374 EGTLQAG 380


>sp|VGH_BPAL3|MINOR spike protein|Escherichia phage alpha3 (Bacteriophage alpha-3)

Query: 1 DGTLQAGP 8
DGT+QAG
Sbjct: 96 DGTIQAGS 103


>sp|VGH_BPPHK|MINOR spike protein|Enterobacteria phage phiK (Bacteriophage phi-K)

Query: 1 DGTLQAGP 8
DGT+QAG
Sbjct: 98 DGTIQAGS 105


>sp|VL2_MMPV1|MINOR capsid protein L2|Macaca mulata papillomavirus 1 (Rhpv

Query: 1 DGTLQAGP 8
D TLQ+GP
Sbjct: 400 DVTLQSGP 407


>sp|CAPSD_BPSAV|MAJOR capsid protein|Salmonella phage ViI

Query: 1 DGTLQAG-PGG 10
DGT+QAG P G
Sbjct: 132 DGTVQAGDPSG 142




157|Sequence|781|790|AGPGGASGPR

>sp|POL2_CRLVP|RNA2 polyprotein|Cherry rasp leaf virus (isolate

Query: 3 PGGASGP 9
PGG SGP
Sbjct: 729 PGGISGP 735


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 3 PGGASGPR 10
PGGAS PR
Sbjct: 1128 PGGASKPR 1135


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 3 PGGASGPR 10
PGGAS PR
Sbjct: 1128 PGGASKPR 1135


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 3 PGGASGPR 10
PGGAS PR
Sbjct: 1128 PGGASKPR 1135


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 3 PGGASGPR 10
PGGAS PR
Sbjct: 1128 PGGASKPR 1135


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 3 PGGASGPR 10
PGGAS PR
Sbjct: 1133 PGGASKPR 1140


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 3 PGGASGPR 10
PGGAS PR
Sbjct: 1133 PGGASKPR 1140


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 AGPGGASG 8
AGP GAS
Sbjct: 159 AGPAGASA 166


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 1 AGPGGASGPR 10
GPG A+ PR
Sbjct: 274 TGPGSATDPR 283


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 1 AGPGGASGPR 10
GPG A+ PR
Sbjct: 276 TGPGSATDPR 285


>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 GGASGPR 10
GG SGPR
Sbjct: 316 GGISGPR 322


>sp|SHUT_ADEG1|SHUTOFF protein|Fowl adenovirus A serotype 1

Query: 1 AGPGGASGPR 10
GPGG G R
Sbjct: 896 GGPGGVRGER 905


>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8

Query: 1 AGPGGASGPR 10
AG GG PR
Sbjct: 505 AGTGGEPNPR 514


>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 1 AGPGGASG 8
AGPG A+G
Sbjct: 2229 AGPGSANG 2236


>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 GGASGPR 10
GG SGPR
Sbjct: 317 GGISGPR 323


>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4 GGASGPR 10
GG SGPR
Sbjct: 317 GGISGPR 323


>sp|SIGM3_REOVL|OUTER capsid protein sigma-3|Reovirus type 1 (strain Lang)

Query: 2 GPGGASG 8
GPGG +G
Sbjct: 316 GPGGMTG 322


>sp|SIGM3_REOVD|OUTER capsid protein sigma-3|Reovirus type 3 (strain Dearing)

Query: 2 GPGGASG 8
GPGG +G
Sbjct: 316 GPGGMTG 322


>sp|SIGM3_REOVJ|OUTER capsid protein sigma-3|Reovirus type 2 (strain D5/Jones)

Query: 2 GPGGASG 8
GPGG +G
Sbjct: 316 GPGGMTG 322


>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)

Query: 1 AGPGGASGPR 10
+GP G GPR
Sbjct: 743 SGPDGCIGPR 752


>sp|SHUT_ADECR|SHUTOFF protein|Canine adenovirus serotype 1 (strain

Query: 2 GPGGASG 8
GPGG +G
Sbjct: 542 GPGGENG 548


>sp|SHUT_ADECC|SHUTOFF protein|Canine adenovirus serotype 1 (strain

Query: 2 GPGGASG 8
GPGG +G
Sbjct: 542 GPGGENG 548




158|Sequence|786|795|ASGPRALEIN

>sp|PHOSP_KHUV|PHOSPHOPROTEIN virus (KHUV)

Query: 1 ASGPRALE 8
ASGP ALE
Sbjct: 178 ASGPPALE 185


>sp|PHOSP_ABLVH|PHOSPHOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 1 ASGPRALE 8
ASGP ALE
Sbjct: 178 ASGPPALE 185


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1 ASGPRALEI 9
+SGP +LEI
Sbjct: 1741 SSGPSSLEI 1749


>sp|PHOSP_RABVI|PHOSPHOPROTEIN virus (strain India) (RABV)

Query: 1 ASGPRALE 8
ASGP ALE
Sbjct: 178 ASGPPALE 185


>sp|UL91_HCMVM|PROTEIN UL91|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 SGPRALEI 9
SGPR LE+
Sbjct: 41 SGPRRLEL 48


>sp|PHOSP_RABVP|PHOSPHOPROTEIN virus (strain Pasteur vaccins

Query: 1 ASGPRALE 8
ASGP ALE
Sbjct: 178 ASGPPALE 185


>sp|PHOSP_RABVS|PHOSPHOPROTEIN virus (strain SAD B19)

Query: 1 ASGPRALE 8
ASGP ALE
Sbjct: 178 ASGPPALE 185


>sp|CAP6_ADE05|PRE-PROTEIN VI|Human adenovirus C serotype 5

Query: 1 ASGPRAL 7
ASGPR+L
Sbjct: 215 ASGPRSL 221


>sp|PHOSP_RABVB|PHOSPHOPROTEIN virus (strain silver-haired bat-associated)

Query: 1 ASGPRALE 8
ASGP ALE
Sbjct: 178 ASGPPALE 185


>sp|PHOSP_RABVM|PHOSPHOPROTEIN virus (strain PM) (RABV)

Query: 1 ASGPRALE 8
ASGP ALE
Sbjct: 178 ASGPPALE 185


>sp|PHOSP_RABVE|PHOSPHOPROTEIN virus (strain ERA) (RABV)

Query: 1 ASGPRALE 8
ASGP ALE
Sbjct: 178 ASGPPALE 185


>sp|UL91_HCMVA|PROTEIN UL91|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 SGPRALEI 9
SGPR LE+
Sbjct: 41 SGPRRLEL 48




159|Sequence|791|800|ALEINKMISF

***** No hits found ******


160|Sequence|796|805|KMISFWRNAH

>sp|MCP_EHV1V|MAJOR capsid protein|Equine herpesvirus 1 (strain V592)

Query: 2 MISFWRNAH 10
++S+WRN H
Sbjct: 651 IVSYWRNTH 659


>sp|MCP_EHV1B|MAJOR capsid protein|Equine herpesvirus 1 (strain Ab4p)

Query: 2 MISFWRNAH 10
++S+WRN H
Sbjct: 651 IVSYWRNTH 659


>sp|MCP_SUHVS|MAJOR capsid protein|Suid herpesvirus 1 (strain Indiana

Query: 4 SFWRNAH 10
S+WRN H
Sbjct: 629 SYWRNTH 635


>sp|DPOL_BPAPS|PROBABLE DNA polymerase|Acyrthosiphon pisum secondary endosymbiont phage

Query: 6 WRNAH 10
WRNAH
Sbjct: 521 WRNAH 525


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 1 KMISFWRNAH 10
K SF++NAH
Sbjct: 1358 KPASFYKNAH 1367


>sp|P0_TYYVF|SUPPRESSOR of silencing P0|Turnip yellows virus (isolate FL-1)

Query: 3 ISFWRNAH 10
ISFWR A+
Sbjct: 217 ISFWRIAN 224


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 ISFWRNAH 10
+SFWR H
Sbjct: 908 LSFWRFIH 915


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 ISFWRNAH 10
+SFWR H
Sbjct: 908 LSFWRFIH 915


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 ISFWRNAH 10
+SFWR H
Sbjct: 908 LSFWRFIH 915


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 ISFWRNAH 10
+SFWR H
Sbjct: 908 LSFWRFIH 915




161|Sequence|801|810|WRNAHKRISS

>sp|CEP2_EHV1B|CYTOPLASMIC envelopment protein 2|Equine herpesvirus 1 (strain Ab4p)

Query: 1 WRNAHKR 7
WR AH+R
Sbjct: 266 WRKAHQR 272


>sp|CEP2_EHV1V|CYTOPLASMIC envelopment protein 2|Equine herpesvirus 1 (strain V592)

Query: 1 WRNAHKR 7
WR AH+R
Sbjct: 266 WRKAHQR 272


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1 WRNAHKRISS 10
W N HKR +
Sbjct: 825 WYNGHKRFDN 834


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 1 WRNAHKRIS 9
W + H+RIS
Sbjct: 2337 WTDLHRRIS 2345


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1 WRNAHKRISS 10
W N HKR +
Sbjct: 825 WYNGHKRFDN 834


>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)

Query: 1 WRNAHKRISS 10
W N HKR +
Sbjct: 825 WYNGHKRFDN 834


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 1 WRNAHKRISS 10
W N HKR +
Sbjct: 825 WYNGHKRFDN 834


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1 WRNAHKRISS 10
W N HKR +
Sbjct: 825 WYNGHKRFDN 834


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1 WRNAHKRISS 10
W N HKR +
Sbjct: 823 WYNGHKRFDN 832


>sp|DPOL_BPAPS|PROBABLE DNA polymerase|Acyrthosiphon pisum secondary endosymbiont phage

Query: 1 WRNAHKRISS 10
WRNAH + S
Sbjct: 521 WRNAHPQTVS 530


>sp|DPOL_BPSP2|DNA polymerase|Bacillus phage SP02 (Bacteriophage SP02)

Query: 1 WRNAHKRI 8
WR A+K+I
Sbjct: 478 WRTANKKI 485


>sp|Y053_OSHVF|UNCHARACTERIZED protein ORF53|Ostreid herpesvirus 1 (isolate France)

Query: 1 WRNAHK 6
W+N HK
Sbjct: 21 WKNMHK 26




162|Sequence|806|815|KRISSQMVVW

>sp|VF349_IIV6|PUTATIVE transcription elongation factor S-II-like|Invertebrate iridescent

Query: 2 RISSQMVVW 10
++ SQ++VW
Sbjct: 64 KLKSQLLVW 72




163|Sequence|811|820|QMVVWLPRSA

>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 MVVWLPRS 9
+ VWLPRS
Sbjct: 467 VTVWLPRS 474


>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 MVVWLPRS 9
+ VWLPRS
Sbjct: 466 VTVWLPRS 473


>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 MVVWLPRS 9
+ VWLPRS
Sbjct: 467 VTVWLPRS 474


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 3 VVWLPRSA 10
++W+P+SA
Sbjct: 6 MMWVPKSA 13




164|Sequence|816|825|LPRSALPRAV

>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 LPRSALPRAV 10
LPRS PRA+
Sbjct: 2276 LPRSGFPRAL 2285


>sp|P2_BPPRD|ADSORPTION protein P2|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 1 LPRSALPRAV 10
LPR LPR V
Sbjct: 555 LPRGRLPRVV 564


>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 2 PRSALPR 8
PRS LPR
Sbjct: 1938 PRSLLPR 1944




165|Sequence|821|830|LPRAVIRHPD

>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P

Query: 2 PRAVIRHP 9
PR +IRHP
Sbjct: 92 PRPLIRHP 99


>sp|UL32_GAHVM|PACKAGING protein UL32 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 PRAVIRHPD 10
PR++ HPD
Sbjct: 556 PRSLFDHPD 564


>sp|YL484_MIMIV|PUTATIVE ankyrin repeat protein L484|Acanthamoeba polyphaga mimivirus

Query: 2 PRAVIRHPD 10
PR ++ HP+
Sbjct: 6 PRIILNHPE 14


>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)

Query: 1 LPRAVIRH 8
LPR V+RH
Sbjct: 71 LPRRVVRH 78


>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)

Query: 1 LPRAVIRH 8
LPR V+RH
Sbjct: 71 LPRRVVRH 78


>sp|CAPSD_AHV2H|CAPSID protein|Atkinsonella hypoxylon virus (isolate 2H)

Query: 1 LPRAVIRH 8
LPR VI+H
Sbjct: 78 LPRNVIQH 85


>sp|UDPE_NPVOP|ECDYSTEROID UDP-glucosyltransferase|Orgyia pseudotsugata multicapsid

Query: 3 RAVIRHP 9
RAV RHP
Sbjct: 174 RAVARHP 180




166|Sequence|826|835|IRHPDYDEEG

>sp|Y32K_BNYVG|RNA-4 uncharacterized 31.9 kDa protein|Beet necrotic yellow vein mosaic

Query: 1 IRHPDYD 7
IRH DYD
Sbjct: 17 IRHEDYD 23


>sp|P31_BNYVS|31 kDa protein|Beet necrotic yellow vein virus

Query: 1 IRHPDYD 7
IRH DYD
Sbjct: 17 IRHEDYD 23


>sp|RPC2_BP186|REGULATORY protein CII|Escherichia phage 186 (Bacteriophage 186)

Query: 2 RHPDYDE 8
+HP YDE
Sbjct: 8 KHPHYDE 14


>sp|Y007_SIFVH|PUTATIVE helicase 7|Sulfolobus islandicus filamentous virus (isolate

Query: 4 PDYDEEG 10
P YDEEG
Sbjct: 328 PGYDEEG 334


>sp|CAPSD_BPPHS|CAPSID protein F|Enterobacteria phage phiX174 (Isolate Sanger)

Query: 1 IRHPDYDE 8
IRH DYD+
Sbjct: 386 IRHHDYDQ 393


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1 IRHPDYD 7
I+HPD D
Sbjct: 435 IKHPDMD 441


>sp|L_OLVVA|RNA-DIRECTED RNA polymerase L|Oliveros mammarenavirus (isolate

Query: 1 IRHPDYD 7
IR PDY+
Sbjct: 438 IRQPDYE 444


>sp|US03_PSHV1|PROTEIN kinase US3 homolog|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 PDYDEEG 10
PD+DE+G
Sbjct: 39 PDFDEDG 45


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 3 HPDYDEE 9
HP+YD E
Sbjct: 2786 HPEYDLE 2792


>sp|PAP1_ASFB7|PUTATIVE poly(A) polymerase catalytic subunit|African swine fever virus

Query: 1 IRHPDYDEEG 10
I HPDY G
Sbjct: 142 IIHPDYQRAG 151


>sp|PAP1_ASFP4|PUTATIVE poly(A) polymerase catalytic subunit|African swine fever virus

Query: 1 IRHPDYDEEG 10
I HPDY G
Sbjct: 142 IIHPDYQRAG 151


>sp|PAP1_ASFK5|PUTATIVE poly(A) polymerase catalytic subunit|African swine fever virus

Query: 1 IRHPDYDEEG 10
I HPDY G
Sbjct: 142 IIHPDYQRAG 151


>sp|PAP1_ASFWA|PUTATIVE poly(A) polymerase catalytic subunit|African swine fever virus

Query: 1 IRHPDYDEEG 10
I HPDY G
Sbjct: 142 IIHPDYQRAG 151


>sp|PAP1_ASFM2|PUTATIVE poly(A) polymerase catalytic subunit|African swine fever virus

Query: 1 IRHPDYDEEG 10
I HPDY G
Sbjct: 142 IIHPDYQRAG 151


>sp|VSR_RHBVC|SUPPRESSOR of RNA silencing p3|Rice hoja blanca virus (strain

Query: 2 RHPDYDE 8
RHP +DE
Sbjct: 50 RHPSFDE 56


>sp|CAPSD_BPS13|CAPSID protein F|Enterobacteria phage S13 (Bacteriophage S13)

Query: 1 IRHPDYD 7
IRH DYD
Sbjct: 386 IRHHDYD 392


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 3 HPDYDEEG 10
HPD +EG
Sbjct: 1419 HPDLADEG 1426


>sp|POL2_GCMV|RNA2 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 3 HPDYDE 8
HPD DE
Sbjct: 426 HPDQDE 431


>sp|POL2_BRSV|RNA2 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 3 HPDYDE 8
HPD DE
Sbjct: 453 HPDQDE 458


>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus

Query: 2 RHPDYD 7
RHPD D
Sbjct: 162 RHPDVD 167


>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate

Query: 2 RHPDYD 7
RHPD D
Sbjct: 162 RHPDVD 167


>sp|YL544_MIMIV|UNCHARACTERIZED protein L544|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 HPDYDE 8
HP+YD+
Sbjct: 54 HPEYDD 59


>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)

Query: 2 RHPDYD 7
RHPD D
Sbjct: 162 RHPDVD 167


>sp|YL005_MIMIV|UNCHARACTERIZED protein L5|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 HPDYDE 8
HP YDE
Sbjct: 377 HPKYDE 382


>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain

Query: 2 RHPDYD 7
RHPD D
Sbjct: 162 RHPDVD 167


>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)

Query: 2 RHPDYDEEG 10
R+P YD E
Sbjct: 49 RYPSYDREA 57


>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)

Query: 2 RHPDYDEEG 10
R+P YD E
Sbjct: 49 RYPSYDREA 57


>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 RHPDYDEEG 10
R P+ DEEG
Sbjct: 416 RDPEEDEEG 424


>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 RHPDYDEEG 10
R P+ DEEG
Sbjct: 416 RDPEEDEEG 424


>sp|VG55_BPMD2|GENE 55 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 RHPDYDE 8
R+PDY+E
Sbjct: 118 RYPDYNE 124


>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 RHPDYDEEG 10
R P+ DEEG
Sbjct: 416 RDPEEDEEG 424


>sp|POLS_AURAV|STRUCTURAL polyprotein|Aura virus (AURAV)

Query: 1 IRHPDYD 7
+ HP YD
Sbjct: 306 VNHPSYD 312


>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)

Query: 2 RHPDYDEEG 10
R+P YD E
Sbjct: 49 RYPSYDREA 57


>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)

Query: 2 RHPDYDEEG 10
R+P YD E
Sbjct: 49 RYPSYDREA 57


>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)

Query: 2 RHPDYDEEG 10
R+P YD E
Sbjct: 49 RYPSYDREA 57




167|Sequence|831|840|YDEEGLYGAI

>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1 YDEEGLYGAI 10
+D EGLYGAI
Sbjct: 681 FDLEGLYGAI 690


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1 YDEEGLYGAI 10
+D EGLYGAI
Sbjct: 681 FDLEGLYGAI 690


>sp|GP30_BPSP1|GENE 30 protein|Bacillus phage SP01 (Bacteriophage SP01)

Query: 1 YDEEGLYGA 9
YD+EG YG+
Sbjct: 113 YDKEGTYGS 121


>sp|PA_I34A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fowl

Query: 1 YDEEGLYGAI 10
+D GLYGAI
Sbjct: 681 FDLGGLYGAI 690


>sp|YR481_MIMIV|UNCHARACTERIZED protein R481|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YDEEGLY 7
YDE GLY
Sbjct: 444 YDENGLY 450


>sp|POLR_NORAV|REPLICATION polyprotein|Nora virus

Query: 2 DEEGLYGAI 10
DEE +YG I
Sbjct: 623 DEEVMYGGI 631


>sp|Y007_SIFVH|PUTATIVE helicase 7|Sulfolobus islandicus filamentous virus (isolate

Query: 1 YDEEGL 6
YDEEGL
Sbjct: 330 YDEEGL 335


>sp|Y049_OSHVF|UNCHARACTERIZED protein ORF49|Ostreid herpesvirus 1 (isolate France)

Query: 1 YDEEGLYGA 9
Y EEGL+ A
Sbjct: 871 YPEEGLFDA 879


>sp|GE_CHV9D|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 9 (strain DHV)

Query: 2 DEEGLYG 8
DE+G+YG
Sbjct: 42 DEDGVYG 48


>sp|UBC4_MIMIV|PROBABLE bifunctional E2/E3 enzyme R795|Acanthamoeba polyphaga mimivirus

Query: 1 YDEEGLYGA 9
YD GLY A
Sbjct: 1260 YDANGLYEA 1268


>sp|VNS3_AHSV1|NON-STRUCTURAL protein NS3|African horse sickness virus 1

Query: 2 DEEGLYGAI 10
DE+ YGA+
Sbjct: 66 DEKAAYGAV 74


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1 YDEEGLYG 8
Y E+G+YG
Sbjct: 1503 YLEDGIYG 1510




168|Sequence|836|845|LYGAILPQVV

>sp|Y058_OSHVF|UNCHARACTERIZED protein ORF58|Ostreid herpesvirus 1 (isolate France)

Query: 1 LYGAILPQV 9
LYG ILP+V
Sbjct: 409 LYGEILPKV 417


>sp|RIR2_IIV3|PROBABLE ribonucleoside-diphosphate reductase small subunit|Invertebrate

Query: 1 LYGAILPQV 9
YG+I PQV
Sbjct: 36 FYGSIYPQV 44


>sp|SCP1_BPSPB|STRESS response protein SCP1|Bacillus phage SPbeta (Bacillus phage

Query: 1 LYGAILPQVV 10
++G+ILP+V+
Sbjct: 15 IHGSILPEVL 24


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 LYGAILP 7
+YGAI+P
Sbjct: 3204 MYGAIMP 3210


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 LYGAILP 7
+YGAI+P
Sbjct: 3205 MYGAIMP 3211


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 LYGAILP 7
+YGAI+P
Sbjct: 3150 MYGAIMP 3156


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 LYGAILP 7
+YGAI+P
Sbjct: 3155 MYGAIMP 3161


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 LYGAILP 7
+YGAI+P
Sbjct: 3175 MYGAIMP 3181


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 LYGAILP 7
+YGAI+P
Sbjct: 3207 MYGAIMP 3213


>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 YGAILPQVV 10
YG LPQV+
Sbjct: 448 YGLSLPQVI 456


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1 LYGAILP 7
+YGAI+P
Sbjct: 3205 MYGAIMP 3211


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 LYGAILP 7
+YGAI+P
Sbjct: 3204 MYGAIMP 3210


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 1 LYGAILP 7
+YGAI+P
Sbjct: 3150 MYGAIMP 3156


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1 LYGAILP 7
+YGAI+P
Sbjct: 3175 MYGAIMP 3181


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 LYGAILP 7
+YGAI+P
Sbjct: 3207 MYGAIMP 3213


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1 LYGAILP 7
+YGAI+P
Sbjct: 3155 MYGAIMP 3161


>sp|YR614_MIMIV|PUTATIVE band 7 family protein|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YGAILPQ 8
YGAI+P+
Sbjct: 12 YGAIVPE 18


>sp|POL2_BAYMY|GENOME polyprotein 2|Barley yellow mosaic virus (isolate

Query: 2 YGAILPQVV 10
YGA+LP +
Sbjct: 72 YGAMLPSFI 80


>sp|POL2_BAYMJ|GENOME polyprotein 2|Barley yellow mosaic virus (strain

Query: 2 YGAILPQVV 10
YGA+LP +
Sbjct: 72 YGAMLPSFI 80


>sp|POL2_BAYMG|GENOME polyprotein 2|Barley yellow mosaic virus (isolate

Query: 2 YGAILPQVV 10
YGA+LP +
Sbjct: 72 YGAMLPSFI 80


>sp|Y413_AFV2P|UNCHARACTERIZED protein ORF413|Acidianus filamentous virus 2 (isolate

Query: 1 LYGAILPQVV 10
LY A+LP ++
Sbjct: 129 LYNALLPNII 138




169|Sequence|841|850|LPQVVTAGTI

***** No hits found ******


170|Sequence|846|855|TAGTITRRAV

***** No hits found ******


171|Sequence|851|860|TRRAVEPTWL

>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)

Query: 3 RAVEPTW 9
++VEPTW
Sbjct: 1065 KSVEPTW 1071


>sp|GE_CHV9D|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 9 (strain DHV)

Query: 3 RAVEPTW 9
+AV PTW
Sbjct: 239 KAVHPTW 245


>sp|PYHD_NPVAC|POLYHEDRIN californica nuclear polyhedrosis virus

Query: 3 RAVEPTWL 10
R VEP+W+
Sbjct: 154 RIVEPSWV 161


>sp|P32_MCMVK|UNCHARACTERIZED protein p32|Maize chlorotic mottle virus (isolate

Query: 2 RRAVEPTW 9
+R ++PTW
Sbjct: 178 KRPIQPTW 185


>sp|ENV_KORV|ENVELOPE glycoprotein|Koala retrovirus (KoRV)

Query: 2 RRAVEPTW 9
++AVEP W
Sbjct: 63 KKAVEPPW 70


>sp|ENV_MMTVC|ENVELOPE glycoprotein gp70|Mouse mammary tumor virus (strain

Query: 5 VEPTWL 10
VEPTW
Sbjct: 315 VEPTWF 320


>sp|ENV_MMTVG|ENVELOPE glycoprotein gp70|Mouse mammary tumor virus (strain

Query: 5 VEPTWL 10
VEPTW
Sbjct: 315 VEPTWF 320


>sp|ENV_MMTVB|ENVELOPE glycoprotein gp70|Mouse mammary tumor virus (strain

Query: 5 VEPTWL 10
VEPTW
Sbjct: 315 VEPTWF 320




172|Sequence|856|865|EPTWLTASNA

>sp|PORTL_BPKVM|PORTAL protein|Vibrio phage KVP40 (isolate Vibrio

Query: 2 PTWLTASN 9
P+W++A+N
Sbjct: 202 PSWMSATN 209


>sp|YR831_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R831|Acanthamoeba

Query: 2 PTWLTA 7
P+WLTA
Sbjct: 384 PSWLTA 389


>sp|YR756_MIMIV|UNCHARACTERIZED protein R756|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 WLTASN 9
WLTA+N
Sbjct: 51 WLTATN 56


>sp|OBP_PSHV1|REPLICATION origin-binding protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 EPTWLTA 7
EP+WLT
Sbjct: 747 EPSWLTG 753


>sp|B1_HHV6Z|PROTEIN B1|Human herpesvirus 6B (strain Z29)

Query: 2 PTWLTAS 8
PTW TAS
Sbjct: 61 PTWRTAS 67




173|Sequence|861|870|TASNARPDRV

***** No hits found ******


174|Sequence|866|875|RPDRVGSELK

>sp|V023_FOWPN|PUTATIVE ankyrin repeat protein FPV023|Fowlpox virus (strain NVSL) (FPV)

Query: 2 PDRVGSEL 9
PDR+ SEL
Sbjct: 409 PDRISSEL 416


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 RPDRVGSEL 9
+PDR GSEL
Sbjct: 1096 QPDRSGSEL 1104


>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate

Query: 1 RPDRVGSELK 10
R D VGSE+K
Sbjct: 247 RIDFVGSEIK 256


>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49

Query: 2 PDRVGSELK 10
PD+VGS ++
Sbjct: 377 PDKVGSRVQ 385




175|Sequence|871|880|GSELKAMVQA

>sp|RPOL_BPSP6|DNA-DIRECTED RNA polymerase|Enterobacteria phage SP6 (Bacteriophage SP6)

Query: 1 GSELKAMVQA 10
G+EL+AM A
Sbjct: 602 GTELRAMASA 611




176|Sequence|876|885|AMVQAPPGYT

>sp|ENV_BIV29|ENVELOPE glycoprotein|Bovine immunodeficiency virus (strain R29)

Query: 1 AMVQAPPGY 9
AMV +PPGY
Sbjct: 284 AMVTSPPGY 292


>sp|V51K_BPL79|51.5 kDa protein|Lactococcus phage (isolate 7-9) (Lactococcus

Query: 2 MVQAPPG 8
M+Q+PPG
Sbjct: 1 MIQSPPG 7


>sp|DPOL_BPT5|DNA polymerase|Escherichia phage T5 (Enterobacteria phage

Query: 3 VQAPPGY 9
V APPGY
Sbjct: 515 VVAPPGY 521


>sp|VG01_EHV1V|UNCHARACTERIZED gene 1 protein|Equine herpesvirus 1 (strain V592)

Query: 1 AMVQAPPGY 9
A+ QAPP Y
Sbjct: 127 ALCQAPPAY 135


>sp|VG01_EHV1H|UNCHARACTERIZED gene 1 protein|Equine herpesvirus 1 (strain HH1)

Query: 1 AMVQAPPGY 9
A+ QAPP Y
Sbjct: 127 ALCQAPPAY 135


>sp|VG01_EHV1B|UNCHARACTERIZED gene 1 protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 AMVQAPPGY 9
A+ QAPP Y
Sbjct: 127 ALCQAPPAY 135


>sp|ENV_SIVS4|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate

Query: 5 APPGY 9
APPGY
Sbjct: 235 APPGY 239


>sp|ENV_SIVML|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate K78)

Query: 5 APPGY 9
APPGY
Sbjct: 236 APPGY 240


>sp|ENV_SIVM1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate Mm142-83)

Query: 5 APPGY 9
APPGY
Sbjct: 237 APPGY 241


>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 APPGY 9
APPGY
Sbjct: 228 APPGY 232


>sp|ENV_SIVSP|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate

Query: 5 APPGY 9
APPGY
Sbjct: 240 APPGY 244


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3 VQAPPGY 9
+QAPP Y
Sbjct: 808 LQAPPSY 814


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 VQAPPGY 9
+QAPP Y
Sbjct: 808 LQAPPSY 814


>sp|ENV_SIVM2|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate Mm251)

Query: 5 APPGY 9
APPGY
Sbjct: 236 APPGY 240


>sp|ENV_SIVMK|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate K6W)

Query: 5 APPGY 9
APPGY
Sbjct: 236 APPGY 240


>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 APPGY 9
APPGY
Sbjct: 227 APPGY 231


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 VQAPPGY 9
+QAPP Y
Sbjct: 807 LQAPPSY 813


>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 5 APPGY 9
APPGY
Sbjct: 219 APPGY 223


>sp|PRIM_PSHV1|DNA primase|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 AMVQAPP 7
AMV+APP
Sbjct: 620 AMVRAPP 626




177|Sequence|881|890|PPGYTLVGAD

>sp|CPM_BYVU|MINOR capsid protein|Beet yellows virus (isolate Ukraine)

Query: 1 PPGYTLVGAD 10
P GY +GAD
Sbjct: 160 PSGYEFLGAD 169


>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 1 PPGYTLVGAD 10
PP Y L G D
Sbjct: 1491 PPSYPLSGKD 1500


>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGVD 302


>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGVD 302


>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGVD 302


>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGVD 302


>sp|MVP_SHMV|MOVEMENT protein|Sunn-hemp mosaic virus (SHMV) (TMV

Query: 2 PGYTLVGAD 10
PGY+L AD
Sbjct: 125 PGYSLTCAD 133


>sp|ENV_SIVSP|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate

Query: 1 PPGYTLV 7
PPGY L+
Sbjct: 241 PPGYALL 247


>sp|ENV_SIVS4|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate

Query: 1 PPGYTLV 7
PPGY L+
Sbjct: 236 PPGYALL 242


>sp|ENV_SIVML|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate K78)

Query: 1 PPGYTLV 7
PPGY L+
Sbjct: 237 PPGYALL 243


>sp|ENV_SIVMK|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate K6W)

Query: 1 PPGYTLV 7
PPGY L+
Sbjct: 237 PPGYALL 243


>sp|ENV_SIVM2|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate Mm251)

Query: 1 PPGYTLV 7
PPGY L+
Sbjct: 237 PPGYALL 243


>sp|ENV_SIVM1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate Mm142-83)

Query: 1 PPGYTLV 7
PPGY L+
Sbjct: 238 PPGYALL 244


>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 PPGYTLV 7
PPGY L+
Sbjct: 228 PPGYALL 234


>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 PPGYTLV 7
PPGY L+
Sbjct: 229 PPGYALL 235


>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 PPGYTLV 7
PPGY L+
Sbjct: 220 PPGYALL 226


>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I89A7|NUCLEOPROTEIN A virus (strain A/Equine/Jillin/1/1989

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I86A3|NUCLEOPROTEIN A virus (strain A/Equine/Tennessee/5/1986

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I86A2|NUCLEOPROTEIN A virus (strain A/Equine/Kentucky/2/1986

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I85A7|NUCLEOPROTEIN A virus (strain A/Ruddy

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I85A5|NUCLEOPROTEIN A virus (strain A/Equine/Santiago/1/1985

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I84A4|NUCLEOPROTEIN A virus (strain A/Gull/Astrakhan/227/1984

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I84A3|NUCLEOPROTEIN A virus (strain A/Mink/Sweden/1984

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I84A2|NUCLEOPROTEIN A virus (strain A/Whale/Maine/328/1984

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I83A5|NUCLEOPROTEIN A virus (strain A/Chicken/Pennsylvania/1/1983

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I83A4|NUCLEOPROTEIN A virus (strain A/Turkey/Ireland/1378/1983

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I82A1|NUCLEOPROTEIN A virus (strain A/Mallard/Astrakhan/263/1982

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I82A0|NUCLEOPROTEIN A virus (strain A/Mallard/Astrakhan/244/1982

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I80AD|NUCLEOPROTEIN A virus (strain A/Gull/Minnesota/945/1980

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I80AC|NUCLEOPROTEIN A virus (strain A/Gull/Massachusetts/26/1980

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I80A8|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/833/1980

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I80A6|NUCLEOPROTEIN A virus (strain A/Duck/Hokkaido/8/1980

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I79A8|NUCLEOPROTEIN A virus (strain A/Gull/Maryland/1815/1979

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I79A7|NUCLEOPROTEIN A virus (strain A/Grey

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I78AF|NUCLEOPROTEIN A virus (strain A/Gull/Maryland/1824/1978

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I78A5|NUCLEOPROTEIN A virus (strain A/Duck/Beijing/1/1978

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I77AG|NUCLEOPROTEIN A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I77AF|NUCLEOPROTEIN A virus (strain A/Gull/Maryland/704/1977

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I77AE|NUCLEOPROTEIN A virus (strain A/Gull/Maryland/5/1977

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I76AK|NUCLEOPROTEIN A virus (strain A/Duck/New

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I76AE|NUCLEOPROTEIN A virus (strain A/Whale/Pacific

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I76A0|NUCLEOPROTEIN A virus (strain A/Anas

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I74A2|NUCLEOPROTEIN A virus (strain A/Duck/Memphis/928/1974

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I73A0|NUCLEOPROTEIN A virus (strain A/Parrot/Ulster/1973

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I72A6|NUCLEOPROTEIN A virus (strain A/Tern/Turkmenia/18/1972

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I72A5|NUCLEOPROTEIN A virus (strain A/Shearwater/Australia/1972

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I69A1|NUCLEOPROTEIN A virus (strain A/Duck/Pennsylvania/1/1969

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I68A3|NUCLEOPROTEIN A virus (strain A/Turkey/Ontario/6118/1968

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I66A1|NUCLEOPROTEIN A virus (strain A/Turkey/Wisconsin/1/1966

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I66A0|NUCLEOPROTEIN A virus (strain A/Turkey/Ontario/7732/1966

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I62A0|NUCLEOPROTEIN A virus (strain A/Duck/England/1/1962

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I61A0|NUCLEOPROTEIN A virus (strain A/Tern/South

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I60A2|NUCLEOPROTEIN A virus (strain A/Duck/Ukraine/2/1960

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I56A2|NUCLEOPROTEIN A virus (strain A/Duck/England/1/1956

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I56A1|NUCLEOPROTEIN A virus (strain A/Duck/Czechoslovakia/1956

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I53A0|NUCLEOPROTEIN A virus (strain A/Duck/Manitoba/1/1953

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I49A1|NUCLEOPROTEIN A virus (strain A/Duck/Germany/1949

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I49A0|NUCLEOPROTEIN A virus (strain A/Chicken/Germany/n/1949

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I34A0|NUCLEOPROTEIN A virus (strain A/Fowl

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 3 GYTLVGAD 10
GY+LVG D
Sbjct: 295 GYSLVGID 302


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 2 PGYTLVGA 9
PGY LV A
Sbjct: 251 PGYALVAA 258


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2 PGYTLVGA 9
PGY LV A
Sbjct: 255 PGYALVAA 262


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2 PGYTLVGA 9
PGY LV A
Sbjct: 255 PGYALVAA 262


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2 PGYTLVGA 9
PGY LV A
Sbjct: 255 PGYALVAA 262


>sp|NCAP_I63A2|NUCLEOPROTEIN A virus (strain A/Equine/Miami/1/1963

Query: 3 GYTLVGAD 10
GY+L+G D
Sbjct: 295 GYSLIGID 302


>sp|MB43_GAHVM|MEMBRANE protein UL43 homolog|Gallid herpesvirus 2 (strain

Query: 1 PPGYTLVG 8
PP YT G
Sbjct: 10 PPSYTTTG 17


>sp|LTP_EHV1B|LARGE tegument protein deneddylase|Equine herpesvirus 1 (strain Ab4p)

Query: 1 PPGYTL 6
PPGYT+
Sbjct: 2765 PPGYTI 2770


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 1 PPGYTLVGAD 10
P YT VG D
Sbjct: 1096 PTSYTSVGPD 1105


>sp|L_PIRVV|RNA-DIRECTED RNA polymerase L|Pirital mammarenavirus (isolate

Query: 1 PPGYTLVG 8
P GY L+G
Sbjct: 87 PDGYRLIG 94


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 PGYTLVGA 9
P +TLVGA
Sbjct: 781 PAHTLVGA 788


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 2 PGYTLVGA 9
P +TLVGA
Sbjct: 780 PSHTLVGA 787


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 2 PGYTLVGA 9
P +TLVGA
Sbjct: 781 PSHTLVGA 788


>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)

Query: 2 PGYTLVG 8
PG+TL G
Sbjct: 11 PGFTLTG 17


>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 PGYTLVG 8
PG+TL G
Sbjct: 11 PGFTLTG 17


>sp|US8A_HHV11|PROTEIN US8.5|Human herpesvirus 1 (strain 17)

Query: 1 PPGYTLV 7
PPGYT V
Sbjct: 105 PPGYTAV 111


>sp|US8A_HHV1F|US8.5 protein|Human herpesvirus 1 (strain F)

Query: 1 PPGYTLV 7
PPGYT V
Sbjct: 105 PPGYTAV 111




178|Sequence|886|895|LVGADVDSQE

>sp|YL122_MIMIV|PUTATIVE ankyrin repeat protein L122|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 GADVDSQE 10
GAD++SQ+
Sbjct: 125 GADINSQD 132


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 2 VGADVDSQE 10
+G D++SQE
Sbjct: 2576 LGVDINSQE 2584


>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)

Query: 2 VGADVDS 8
VGAD+DS
Sbjct: 835 VGADLDS 841


>sp|CAPSD_BPHC1|MAJOR capsid protein|Haemophilus phage HP1 (strain HP1c1)

Query: 1 LVGADVDSQE 10
LVGAD+ S+E
Sbjct: 222 LVGADLVSKE 231




179|Sequence|891|900|VDSQELWIAA

>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40

Query: 3 SQELWIA 9
SQELW+A
Sbjct: 98 SQELWLA 104


>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7

Query: 3 SQELWIA 9
SQELW+A
Sbjct: 98 SQELWLA 104


>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 4 QELWIAA 10
Q+LW+AA
Sbjct: 244 QQLWLAA 250


>sp|VGE4_EHV2|UNCHARACTERIZED gene E4 protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 VDSQELWIA 9
V+SQ LW+A
Sbjct: 141 VESQNLWLA 149


>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 4 QELWIAA 10
Q+LW+AA
Sbjct: 244 QQLWLAA 250


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 4 QELWIAA 10
Q+LW+AA
Sbjct: 244 QQLWLAA 250


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 4 QELWIAA 10
Q+LW+AA
Sbjct: 244 QQLWLAA 250


>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1

Query: 4 QELWIAA 10
Q+LW+AA
Sbjct: 244 QQLWLAA 250


>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1

Query: 4 QELWIAA 10
Q+LW+AA
Sbjct: 244 QQLWLAA 250


>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1

Query: 4 QELWIAA 10
Q+LW+AA
Sbjct: 244 QQLWLAA 250




180|Sequence|896|905|LWIAAVLGDA

>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WIAAVLGDA 10
W+ AV GDA
Sbjct: 2325 WVNAVCGDA 2333


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WIAAVLGDA 10
W+ AV GDA
Sbjct: 2319 WVNAVCGDA 2327


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WIAAVLGDA 10
W+ AV GDA
Sbjct: 2319 WVNAVCGDA 2327


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WIAAVLGDA 10
W+ AV GDA
Sbjct: 2314 WVNAVCGDA 2322


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 2 WIAAVLGDA 10
W+ AV GDA
Sbjct: 2324 WVNAVCGDA 2332


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WIAAVLGDA 10
W+ AV GDA
Sbjct: 2320 WVNAVCGDA 2328


>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WIAAVLGDA 10
W+ AV GDA
Sbjct: 2325 WVNAVCGDA 2333


>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WIAAVLGDA 10
W+ AV GDA
Sbjct: 2325 WVNAVCGDA 2333


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 WIAAVLGDA 10
W+ AV GDA
Sbjct: 2324 WVNAVCGDA 2332


>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 2 WIAAVLGDA 10
W+ AV GDA
Sbjct: 2324 WVNAVCGDA 2332


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 2 WIAAVLGDA 10
W+ AV GDA
Sbjct: 2327 WVNAVCGDA 2335


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 2 WIAAVLGDA 10
W+ AV GDA
Sbjct: 2321 WVNAVCGDA 2329


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 2 WIAAVLGDA 10
W A+V GDA
Sbjct: 3411 WWASVTGDA 3419


>sp|VE1_BPV5|REPLICATION protein E1|Bovine papillomavirus type 5

Query: 2 WIAAVLG 8
W+AAV G
Sbjct: 210 WVAAVFG 216


>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 1 LWIAAVLG 8
LW+ +VLG
Sbjct: 2148 LWVESVLG 2155


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 WIAAVLGDA 10
W+ A+LG A
Sbjct: 895 WLLAILGSA 903




181|Sequence|901|910|VLGDAHFAGM

>sp|DUHM_BPW14|DEOXYURIDYLATE hydroxymethyltransferase|Delftia phage PhiW-14 (Deftia acidovorans

Query: 2 LGDAHFA 8
LGDAH+A
Sbjct: 282 LGDAHYA 288


>sp|VP3_BANNV|VIRAL guanylyltransferase VP3|Banna virus (BAV)

Query: 1 VLGDAHFAGM 10
+LGDAH A +
Sbjct: 46 MLGDAHHANL 55


>sp|GT_BPN15|TAIL assembly protein GT|Escherichia phage N15 (Bacteriophage N15)

Query: 4 DAHFAGM 10
DAHF+G+
Sbjct: 186 DAHFSGL 192


>sp|HEMA_I78AE|HEMAGGLUTININ A virus (strain A/Duck/New

Query: 2 LGDAHFAG 9
LGD FAG
Sbjct: 68 LGDCSFAG 75


>sp|HEMA_I76AH|HEMAGGLUTININ A virus (strain A/Duck/Memphis/546/1976

Query: 2 LGDAHFAG 9
LGD FAG
Sbjct: 68 LGDCSFAG 75


>sp|HEMA_I60A1|HEMAGGLUTININ A virus (strain A/Duck/Ukraine/1/1960

Query: 2 LGDAHFAG 9
LGD FAG
Sbjct: 68 LGDCSFAG 75


>sp|HEMA_I56A2|HEMAGGLUTININ A virus (strain A/Duck/England/1/1956

Query: 2 LGDAHFAG 9
LGD FAG
Sbjct: 68 LGDCSFAG 75


>sp|GT_LAMBD|TAIL assembly protein GT|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 VLGDAHFAGM 10
VL D HF+G+
Sbjct: 183 VLLDMHFSGL 192


>sp|GG_PSHV1|GLYCOPROTEIN G|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 LGDAHFAG 9
+GD HF G
Sbjct: 157 IGDDHFVG 164




182|Sequence|906|915|HFAGMHGCTA

>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 HFAGMHGC 8
HFAG GC
Sbjct: 973 HFAGFAGC 980


>sp|POLN_TYMVA|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 HFAGMHGC 8
HFAG GC
Sbjct: 973 HFAGFAGC 980


>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus

Query: 1 HFAGMHGC 8
HFAG GC
Sbjct: 973 HFAGFAGC 980


>sp|UL32_GAHVM|PACKAGING protein UL32 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 HFAGMHGCT 9
HF HGCT
Sbjct: 155 HFLSDHGCT 163


>sp|YL589_MIMIV|PUTATIVE ankyrin repeat protein L589|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 HFAGMHGCT 9
+ A HGCT
Sbjct: 151 YLAAKHGCT 159


>sp|GB_BHV2B|ENVELOPE glycoprotein B|Bovine herpesvirus 2 (strain BMV)

Query: 2 FAGMHG 7
FAG+HG
Sbjct: 750 FAGLHG 755


>sp|POLN_KYMVJ|NON-STRUCTURAL replication polyprotein|Kennedya yellow mosaic virus (strain

Query: 1 HFAGMHGC 8
H AG GC
Sbjct: 999 HLAGFAGC 1006


>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51

Query: 1 HFAGMHG 7
H++G HG
Sbjct: 185 HYSGTHG 191


>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 5 MHGCTA 10
M+GCTA
Sbjct: 738 MYGCTA 743


>sp|POLN_GFKVM|NON-STRUCTURAL replication polyprotein|Grapevine fleck virus (isolate Italy/MT48)

Query: 1 HFAGMHGC 8
H AG GC
Sbjct: 1045 HIAGFAGC 1052


>sp|POLG_MRFVC|GENOME polyprotein|Maize rayado fino virus (isolate

Query: 1 HFAGMHGC 8
H AG GC
Sbjct: 909 HIAGFAGC 916


>sp|POLN_EPMV|NON-STRUCTURAL replication polyprotein|Eggplant mosaic virus

Query: 1 HFAGMHGC 8
H AG GC
Sbjct: 962 HIAGFAGC 969


>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7

Query: 2 FAGMHGCT 9
F +HGCT
Sbjct: 158 FYTVHGCT 165


>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus

Query: 1 HFAGMHGC 8
H AG GC
Sbjct: 896 HIAGFPGC 903




183|Sequence|911|920|HGCTAFGWMT

>sp|TERL_BPSF5|PUTATIVE terminase large subunit|Shigella phage SfV (Shigella flexneri

Query: 3 CTAFGWM 9
C AFGW+
Sbjct: 93 CCAFGWV 99


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 1 HGCTAFGW 8
HG + FGW
Sbjct: 243 HGFSTFGW 250


>sp|CAPSD_TTVD1|CAPSID protein|Torque teno tupaia virus (isolate

Query: 1 HGCTAFGW 8
HG AFGW
Sbjct: 215 HGLFAFGW 222


>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus

Query: 2 GCTAFGWM 9
GC +F W+
Sbjct: 123 GCVSFSWL 130


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 CTAFGWM 9
CTA GW+
Sbjct: 3552 CTAVGWL 3558


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 CTAFGWM 9
CTA GW+
Sbjct: 3552 CTAVGWL 3558


>sp|PG082_VARV|TELOMERE-BINDING protein OPG082|Variola virus

Query: 4 TAFGWMT 10
T FGW+T
Sbjct: 94 TPFGWLT 100


>sp|PG082_VAR67|TELOMERE-BINDING protein OPG082|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4 TAFGWMT 10
T FGW+T
Sbjct: 94 TPFGWLT 100


>sp|PG082_VACCW|TELOMERE-BINDING protein OPG082|Vaccinia virus (strain Western Reserve)

Query: 4 TAFGWMT 10
T FGW+T
Sbjct: 94 TPFGWLT 100


>sp|PG082_VACCC|TELOMERE-BINDING protein OPG082|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 TAFGWMT 10
T FGW+T
Sbjct: 94 TPFGWLT 100


>sp|PG082_MONPV|TELOMERE-BINDING protein OPG082|Monkeypox virus (MPXV)

Query: 4 TAFGWMT 10
T FGW+T
Sbjct: 94 TPFGWLT 100


>sp|YL461_MIMIV|UNCHARACTERIZED protein L461|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GCTAFGWM 9
G TAF W+
Sbjct: 64 GATAFAWL 71


>sp|L_BDVV|RNA-DIRECTED RNA polymerase L|Borna disease virus (strain V)

Query: 1 HGCTAFGW 8
HGC + W
Sbjct: 1440 HGCYSLSW 1447


>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)

Query: 1 HGCTAFGW 8
HGC + W
Sbjct: 1440 HGCYSLSW 1447


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 HGCTAFG 7
HGC FG
Sbjct: 205 HGCGGFG 211


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 3 CTAFGWMT 10
CT F W T
Sbjct: 93 CTQFKWTT 100


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 3 CTAFGWMT 10
CT F W T
Sbjct: 93 CTQFKWTT 100


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 HGCTAFG 7
HGC FG
Sbjct: 205 HGCGGFG 211


>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 HGCTAFGW 8
+ C FGW
Sbjct: 2616 YACMKFGW 2623


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 HGCTAFGW 8
+ C FGW
Sbjct: 2613 YACMKFGW 2620


>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 HGCTAFGW 8
+ C FGW
Sbjct: 2616 YACIKFGW 2623


>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7

Query: 1 HGCTAFGW 8
HGC+ FG+
Sbjct: 256 HGCSFFGF 263


>sp|HEMA_I72A5|HEMAGGLUTININ A virus (strain A/Shearwater/Australia/1972

Query: 2 GCTAFGWM 9
GCT GW+
Sbjct: 70 GCTIEGWI 77


>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27

Query: 2 GCTAFGW 8
GC A GW
Sbjct: 14 GCRAGGW 20


>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a

Query: 2 GCTAFGW 8
GC A GW
Sbjct: 14 GCRAGGW 20


>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57

Query: 2 GCTAFGW 8
GC A GW
Sbjct: 14 GCRAGGW 20


>sp|YR843_MIMIV|UNCHARACTERIZED hydrolase R843|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 HGCTAFGW 8
HG T + W
Sbjct: 97 HGLTGYSW 104


>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)

Query: 5 AFGWMT 10
AFGW T
Sbjct: 166 AFGWQT 171


>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 AFGWMT 10
AFGW T
Sbjct: 166 AFGWQT 171


>sp|GG_EHV1V|ENVELOPE glycoprotein G|Equine herpesvirus 1 (strain V592)

Query: 1 HGCTAFG 7
HG TA+G
Sbjct: 184 HGLTAYG 190


>sp|GG_EHV1K|ENVELOPE glycoprotein G|Equine herpesvirus 1 (strain Kentucky

Query: 1 HGCTAFG 7
HG TA+G
Sbjct: 184 HGLTAYG 190


>sp|GG_EHV1B|ENVELOPE glycoprotein G|Equine herpesvirus 1 (strain Ab4p)

Query: 1 HGCTAFG 7
HG TA+G
Sbjct: 184 HGLTAYG 190


>sp|KITH_EHV4|THYMIDINE kinase|Equine herpesvirus 4 (strain 1942)

Query: 1 HGCTAFG 7
H CT FG
Sbjct: 115 HTCTLFG 121




184|Sequence|916|925|FGWMTLQGRK

>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 4 MTLQGRK 10
+TLQGRK
Sbjct: 707 VTLQGRK 713


>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P

Query: 2 GWMTLQGRK 10
GW LQG K
Sbjct: 160 GWADLQGLK 168


>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61

Query: 3 WMTLQGRK 10
W+T +GRK
Sbjct: 424 WITHRGRK 431


>sp|MATA2_BPQBE|MATURATION protein A2|Escherichia virus Qbeta (Bacteriophage Q-beta)

Query: 3 WMTLQGR 9
W TL+GR
Sbjct: 38 WYTLKGR 44


>sp|CAPSD_BFDV|CAPSID protein|Beak and feather disease virus

Query: 2 GWMTLQG 8
GW+ LQG
Sbjct: 194 GWIPLQG 200




185|Sequence|921|930|LQGRKSRGTD

>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 GRKSRGT 9
GR+SRGT
Sbjct: 1602 GRESRGT 1608


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 GRKSRGT 9
GR+SRGT
Sbjct: 1602 GRESRGT 1608


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 GRKSRGT 9
GR+SRGT
Sbjct: 1602 GRESRGT 1608


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 GRKSRGT 9
GR+SRGT
Sbjct: 1602 GRESRGT 1608


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 GRKSRGT 9
GR+SRGT
Sbjct: 1602 GRESRGT 1608


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 LQGRKSRGT 9
+QGRK+ GT
Sbjct: 564 IQGRKAVGT 572


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 LQGRKSRGT 9
+QGRK+ GT
Sbjct: 564 IQGRKAVGT 572




186|Sequence|926|935|SRGTDLHSKT

>sp|YL371_MIMIV|PUTATIVE ankyrin repeat protein L371|Acanthamoeba polyphaga mimivirus

Query: 3 GTDLHSKT 10
G D HSKT
Sbjct: 15 GDDFHSKT 22


>sp|YR286_MIMIV|PUTATIVE F-box and FNIP repeat-containing|Acanthamoeba polyphaga mimivirus

Query: 3 GTDLHSK 9
GTD HSK
Sbjct: 225 GTDYHSK 231


>sp|VG07_ICHVA|PUTATIVE membrane protein ORF7|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 SRGTDLHSKT 10
+RGTD H++T
Sbjct: 71 TRGTDAHTQT 80


Query: 1 SRGTDLHSKT 10
+RGTD H++T
Sbjct: 85 TRGTDAHTQT 94


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 3 GTDLHSKT 10
G +LHSKT
Sbjct: 1289 GMELHSKT 1296


>sp|YL733_MIMIV|UNCHARACTERIZED ABC transporter ATP-binding protein/permease|Acanthamoeba polyphaga

Query: 1 SRGTDLHSK 9
SRG ++H K
Sbjct: 201 SRGPEIHDK 209


>sp|VE1_MNPVA|REPLICATION protein E1|Mastomys natalensis papillomavirus (isolate African

Query: 1 SRGTDLH 7
+RGTD+H
Sbjct: 595 ARGTDVH 601


>sp|RDRP_PRV|RNA-DIRECTED RNA polymerase|Pieris rapae virus

Query: 3 GTDLHSK 9
GTDLH K
Sbjct: 912 GTDLHIK 918




187|Sequence|931|940|LHSKTATTVG

>sp|RIR1_IIV6|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 HSKTATTVG 10
H+K TTVG
Sbjct: 217 HTKKITTVG 225




188|Sequence|936|945|ATTVGISREH

>sp|VP5_APRVF|OUTER capsid protein VP5|Aedes pseudoscutellaris reovirus (isolate

Query: 3 TVGISREH 10
TVGI+RE+
Sbjct: 884 TVGITREY 891


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 TTVGISRE 9
TTVG SRE
Sbjct: 2596 TTVGDSRE 2603


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 TTVGISRE 9
TTVG SRE
Sbjct: 2603 TTVGDSRE 2610


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 TTVGISRE 9
TTVG SRE
Sbjct: 2642 TTVGDSRE 2649


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 TTVGISRE 9
TTVG SRE
Sbjct: 2596 TTVGDSRE 2603


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 TTVGISRE 9
TTVG SRE
Sbjct: 2603 TTVGDSRE 2610


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 TTVGISRE 9
TTVG SRE
Sbjct: 2642 TTVGDSRE 2649


>sp|YL454_MIMIV|UNCHARACTERIZED protein L454|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 TTVGISR 8
TTVGISR
Sbjct: 706 TTVGISR 712




189|Sequence|941|950|ISREHAKIFN

>sp|VP2_CAVCA|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 2 SREHAKIFN 10
SR HAKI N
Sbjct: 88 SRSHAKICN 96


>sp|VP2_CAV26|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 2 SREHAKIFN 10
SR HAKI N
Sbjct: 88 SRSHAKICN 96


>sp|VP2_CAVCI|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 2 SREHAKIFN 10
SR HAKI N
Sbjct: 88 SRSHAKICN 96


>sp|VP2_CAVC1|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 2 SREHAKIFN 10
SR HAKI N
Sbjct: 88 SRSHAKICN 96


>sp|VP2_CAV82|DUAL specificity protein phosphatase VP2|Chicken anemia virus (isolate

Query: 2 SREHAKIFN 10
SR HAKI N
Sbjct: 88 SRSHAKICN 96


>sp|VG59_SHV21|GENE 59 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 ISREHAKIFN 10
+ +EH KI+N
Sbjct: 19 VLQEHTKIYN 28


>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P

Query: 1 ISREHAKIFN 10
+S +H K+FN
Sbjct: 23 MSGDHIKVFN 32




190|Sequence|946|955|AKIFNYGRIY

>sp|DPOL_BPMD2|DNA polymerase|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 AKIFNYGRIY 10
AK N+GR+Y
Sbjct: 446 AKTVNFGRVY 455


>sp|POLS_IPNVS|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 2 KIFNYGRI 9
K FNYGR+
Sbjct: 91 KAFNYGRL 98


>sp|POLS_IPNVN|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 2 KIFNYGRI 9
K FNYGR+
Sbjct: 91 KAFNYGRL 98


>sp|POLS_IPNVJ|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 2 KIFNYGRI 9
K FNYGR+
Sbjct: 91 KAFNYGRL 98


>sp|VRPO_LAMBD|REPLICATION protein O|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 AKIFNYGR 8
AKI N+GR
Sbjct: 5 AKILNFGR 12


>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 4 FNYGRI 9
FNYGR+
Sbjct: 756 FNYGRL 761


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 3 IFNYGRIY 10
+FNY +IY
Sbjct: 628 LFNYDKIY 635


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 3 IFNYGRIY 10
+FNY +IY
Sbjct: 628 LFNYDKIY 635


>sp|RDRP_AHSV|RNA-DIRECTED RNA polymerase|African horse sickness virus (AHSV)

Query: 2 KIFNYGRI 9
++F YGRI
Sbjct: 17 RLFKYGRI 24


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 3 IFNYGRIY 10
+FNY R Y
Sbjct: 704 VFNYARPY 711


>sp|RDRP_BPPH6|RNA-DIRECTED RNA polymerase|Pseudomonas phage phi6 (Bacteriophage phi-6)

Query: 1 AKIFNYGRIY 10
A + YGR+Y
Sbjct: 68 ANVDEYGRVY 77


>sp|CAPSD_FDVS|INNER capsid protein S2|Fiji disease virus (isolate Sugarcane)

Query: 1 AKIFNYGR 8
KIF YGR
Sbjct: 323 GKIFKYGR 330


>sp|VSR_RGDV|SUPPRESSOR of RNA-mediated gene silencing|Rice gall dwarf virus (RGDV)

Query: 3 IFNYGRIY 10
+FN GR+Y
Sbjct: 315 MFNDGRVY 322




191|Sequence|951|960|YGRIYGAGQP

>sp|RDRP_BPPH6|RNA-DIRECTED RNA polymerase|Pseudomonas phage phi6 (Bacteriophage phi-6)

Query: 1 YGRIYGAG 8
YGR+YG G
Sbjct: 73 YGRVYGNG 80


>sp|DPOL_BPMD2|DNA polymerase|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 YGRIYGAG 8
+GR+YG G
Sbjct: 451 FGRVYGGG 458


>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)

Query: 5 YGAGQP 10
YGAGQP
Sbjct: 998 YGAGQP 1003


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 YGAGQP 10
YGAGQP
Sbjct: 1005 YGAGQP 1010


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 YGAGQP 10
YGAGQP
Sbjct: 1005 YGAGQP 1010


>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8

Query: 1 YGRIYGAGQP 10
YG IY G+P
Sbjct: 305 YGNIYLGGKP 314


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 YGAGQP 10
YGAGQP
Sbjct: 1004 YGAGQP 1009


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 YGAGQP 10
YGAGQP
Sbjct: 1004 YGAGQP 1009


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 YGAGQP 10
YGAGQP
Sbjct: 1004 YGAGQP 1009


>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9

Query: 1 YGRIYGAGQP 10
YG IY G+P
Sbjct: 305 YGNIYLGGKP 314


>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9

Query: 1 YGRIYGAGQP 10
YG IY G+P
Sbjct: 305 YGNIYLGGKP 314


>sp|POLS_MIDDV|STRUCTURAL polyprotein|Middelburg virus

Query: 5 YGAGQP 10
YG+GQP
Sbjct: 1011 YGSGQP 1016


>sp|NCAP_MILVL|NUCLEOPROTEIN lettuce virus (isolate Lettuce/Netherlands/LS301-O)

Query: 1 YGRIYGAGQP 10
+GR+ GQP
Sbjct: 401 FGRLNALGQP 410


>sp|DEPOL_BPK36|DEPOLYMERASE, capsule K63-specific|Klebsiella phage KP36 (Bacteriophage KP36)

Query: 1 YGRIYGAGQP 10
YGR Y G P
Sbjct: 296 YGRSYYIGSP 305


>sp|GAG_JEMBR|GAG polyprotein|Jembrana disease virus (JDV)

Query: 3 RIYGAGQP 10
R YG G+P
Sbjct: 369 RCYGCGKP 376


>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)

Query: 5 YGAGQP 10
YG+GQP
Sbjct: 1008 YGSGQP 1013


>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)

Query: 5 YGAGQP 10
YG+GQP
Sbjct: 1008 YGSGQP 1013


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 2 GRIYGAGQP 10
G IYG G P
Sbjct: 1178 GTIYGNGVP 1186


>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)

Query: 3 RIYGAGQP 10
R YG G+P
Sbjct: 369 RCYGCGKP 376


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 5 YGAGQP 10
YG+GQP
Sbjct: 1007 YGSGQP 1012


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 5 YGAGQP 10
YG+GQP
Sbjct: 1007 YGSGQP 1012


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 2 GRIYGAGQP 10
GR+YG P
Sbjct: 207 GRLYGDSNP 215


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 5 YGAGQP 10
YG+GQP
Sbjct: 1007 YGSGQP 1012


>sp|POLS_SAV3|STRUCTURAL polyprotein|Alphavirus salmon subtype 3 (SAV3)

Query: 5 YGAGQP 10
YGAG+P
Sbjct: 1063 YGAGRP 1068


>sp|POLS_SAV1|STRUCTURAL polyprotein|Alphavirus salmon subtype 1 (SAV1)

Query: 5 YGAGQP 10
YGAG+P
Sbjct: 1064 YGAGRP 1069


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 GRIYGAGQ 9
G+IY AG+
Sbjct: 470 GKIYAAGE 477


>sp|POLS_SAV2|STRUCTURAL polyprotein|Alphavirus salmon subtype 2 (SAV2)

Query: 5 YGAGQP 10
YGAG+P
Sbjct: 1065 YGAGRP 1070




192|Sequence|956|965|GAGQPFAERL

>sp|VIF_HV2D2|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1 GAGQPFAER 9
G+GQPFA R
Sbjct: 194 GSGQPFAPR 202


>sp|RIR1_SHV21|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Saimiriine herpesvirus 2 (strain 11)

Query: 1 GAGQPFA 7
G GQPFA
Sbjct: 521 GKGQPFA 527


>sp|REPA_WDVS|REPLICATION-ASSOCIATED protein A|Wheat dwarf virus (isolate Sweden)

Query: 2 AGQPFAERL 10
AGQP ERL
Sbjct: 251 AGQPEQERL 259




193|Sequence|961|970|FAERLLMQFN

>sp|PE38_NPVOP|MAJOR immediate early protein|Orgyia pseudotsugata multicapsid

Query: 3 ERLLMQFN 10
ERLL +FN
Sbjct: 21 ERLLSEFN 28




194|Sequence|966|975|LMQFNHRLTQ

>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1 LMQFNHR 7
L+QFNHR
Sbjct: 918 LLQFNHR 924


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1 LMQFNHR 7
L+QFNHR
Sbjct: 918 LIQFNHR 924


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1 LMQFNHR 7
L+QFNHR
Sbjct: 916 LIQFNHR 922


>sp|CAPSD_BPSPP|MAJOR capsid protein|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 1 LMQFNHRL 8
++QF HRL
Sbjct: 315 IVQFKHRL 322




195|Sequence|971|980|HRLTQQEAAE

>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain

Query: 1 HRLTQQEAA 9
HR+ Q EAA
Sbjct: 335 HRVLQHEAA 343


>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1 HRLTQQEAAE 10
R TQQEAA+
Sbjct: 112 QRKTQQEAAD 121


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 HRLTQQEAAE 10
R TQQEAA+
Sbjct: 112 QRKTQQEAAD 121




196|Sequence|976|985|QEAAEKAQQM

***** No hits found ******


197|Sequence|981|990|KAQQMYAATK

>sp|POL_AVIRE|GAG-POL polyprotein|Avian reticuloendotheliosis virus

Query: 2 AQQMYAATK 10
AQ +YAAT+
Sbjct: 399 AQPLYAATR 407




198|Sequence|986|995|YAATKGLRWY

>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain

Query: 2 AATKGLRW 9
AA KGL+W
Sbjct: 1012 AAAKGLKW 1019


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 3 ATKGLRW 9
A KGLRW
Sbjct: 1139 AAKGLRW 1145


>sp|MVP_LIYV9|MOVEMENT protein Hsp70h|Lettuce infectious yellows virus (isolate

Query: 1 YAATKGL 7
YA+TKGL
Sbjct: 336 YASTKGL 342


>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United

Query: 3 ATKGLRW 9
T+G+RW
Sbjct: 1791 GTRGIRW 1797


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 2 AATKGLRW 9
+A KGL W
Sbjct: 1124 SAAKGLEW 1131


>sp|TEG5_BHV1C|TEGUMENT protein UL47|Bovine herpesvirus 1.1 (strain Cooper)

Query: 3 ATKGLRW 9
A +GLRW
Sbjct: 494 AERGLRW 500




199|Sequence|991|1000|GLRWYRLSDE

>sp|POL2_ARMVS|RNA2 polyprotein|Arabis mosaic virus (isolate Syrah)

Query: 3 RWYRLSDE 10
RWY SDE
Sbjct: 204 RWYDTSDE 211


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 3 RWYRLSDE 10
R+YRLS+E
Sbjct: 4671 RFYRLSNE 4678


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 3 RWYRLSDE 10
R+YRLS+E
Sbjct: 4646 RFYRLSNE 4653


>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian

Query: 4 WYRLSDE 10
WYR SD+
Sbjct: 124 WYRTSDD 130


>sp|POL2_ARMVN|RNA2 polyprotein|Arabis mosaic virus (isolate NW)

Query: 3 RWYRLSDE 10
RWY SDE
Sbjct: 183 RWYDASDE 190


>sp|VP2_CACV4|MINOR capsid protein VP2|Canine calicivirus (strain 48) (CaCV)

Query: 3 RWYRLSDE 10
RW+RL+ E
Sbjct: 68 RWFRLAKE 75


>sp|RDRP_GRVMC|RNA-DIRECTED RNA polymerase|Groundnut rosette virus (strain MC1)

Query: 1 GLRWYRL 7
GL WYR+
Sbjct: 730 GLSWYRM 736


>sp|RDRP_RGDV|RNA-DIRECTED RNA polymerase P1|Rice gall dwarf virus (RGDV)

Query: 4 WYRLSDE 10
WY L+DE
Sbjct: 116 WYELNDE 122


>sp|R1A_LIYV9|REPLICASE polyprotein 1a|Lettuce infectious yellows virus (isolate

Query: 1 GLRWYRL 7
G+ WYRL
Sbjct: 1492 GVSWYRL 1498


>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 1 GLRWYRL 7
G+ WYRL
Sbjct: 1492 GVSWYRL 1498


>sp|YR815_MIMIV|PUTATIVE sel1-like repeat-containing protein R815|Acanthamoeba polyphaga

Query: 1 GLRWYRLS 8
++WY+LS
Sbjct: 152 AIKWYKLS 159


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 1 GLRWYRL 7
G RW+RL
Sbjct: 236 GTRWHRL 242


>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)

Query: 2 LRWYRLSD 9
+ WYR+ D
Sbjct: 122 IAWYRMGD 129


>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)

Query: 2 LRWYRLSD 9
+ WYR+ D
Sbjct: 122 IAWYRMGD 129


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 1 GLRWYRL 7
G RW+RL
Sbjct: 236 GTRWHRL 242


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 1 GLRWYRL 7
G RW+RL
Sbjct: 236 GTRWHRL 242


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 1 GLRWYRL 7
G RW+RL
Sbjct: 236 GTRWHRL 242


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 1 GLRWYRL 7
G RW+RL
Sbjct: 236 GTRWHRL 242


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 1 GLRWYRL 7
G RW+RL
Sbjct: 236 GTRWHRL 242


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 1 GLRWYRL 7
G RW+RL
Sbjct: 236 GTRWHRL 242


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 1 GLRWYRL 7
G RW+RL
Sbjct: 236 GTRWHRL 242


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 1 GLRWYRL 7
G RW+RL
Sbjct: 236 GTRWHRL 242


>sp|POL2_GFLVN|RNA2 polyprotein|Grapevine fanleaf virus (isolate NW)

Query: 3 RWYRLSDE 10
+WY SDE
Sbjct: 185 KWYDTSDE 192


>sp|GD_SUHVR|ENVELOPE glycoprotein D|Suid herpesvirus 1 (strain Rice)

Query: 4 WYRLSD 9
WYR++D
Sbjct: 98 WYRIAD 103


>sp|POL2_GFLV|RNA2 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 3 RWYRLSDE 10
+WY SDE
Sbjct: 184 KWYDTSDE 191


>sp|P8_WTV|OUTER capsid protein P8|Wound tumor virus (WTV)

Query: 4 WYRLSD 9
WYR+S+
Sbjct: 380 WYRISE 385


>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 GLRWYRLSD 9
G RW LSD
Sbjct: 316 GPRWISLSD 324


>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GLRWYRLSD 9
G RW LSD
Sbjct: 316 GPRWISLSD 324


>sp|US20_HCMVM|MEMBRANE protein US20|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 GLRWYRLSD 9
G RW LSD
Sbjct: 228 GPRWISLSD 236


>sp|ENV_FENV1|ENVELOPE glycoprotein|Feline endogenous virus ECE1

Query: 1 GLRWY 5
GLRWY
Sbjct: 219 GLRWY 223


>sp|YR680_MIMIV|UNCHARACTERIZED protein R680|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 WYRLSD 9
WY LSD
Sbjct: 40 WYMLSD 45


>sp|YVAN_VACCC|UNCHARACTERIZED 7.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GLRWY 5
G+RWY
Sbjct: 35 GIRWY 39


>sp|VE6_HPV35|PROTEIN E6|Human papillomavirus 35

Query: 3 RWYRLS 8
RWYR S
Sbjct: 77 RWYRYS 82




200|Sequence|996|1005|RLSDEGEWLV

>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)

Query: 1 RLSDEGEW 8
R+ D+GEW
Sbjct: 341 RVKDDGEW 348


>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus

Query: 1 RLSDEGEW 8
R+ D+GEW
Sbjct: 341 RVKDDGEW 348


>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate

Query: 1 RLSDEGEW 8
R+ D+GEW
Sbjct: 341 RVKDDGEW 348


>sp|RIR1_VACCW|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Western Reserve)

Query: 1 RLSDEGEW 8
R+ D+GEW
Sbjct: 341 RVKDDGEW 348


>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 RLSDEGEW 8
R+ D+GEW
Sbjct: 341 RVKDDGEW 348


>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1 RLSDEGEW 8
R+ D+GEW
Sbjct: 341 RVKDDGEW 348


>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31

Query: 1 RLSDEGEW 8
++SDEG+W
Sbjct: 412 KVSDEGDW 419


>sp|P1_PNLV|GENOME-LINKED protein precursor|Poinsettia latent virus (isolate Euphorbia

Query: 2 LSDEGEWL 9
LS +GEWL
Sbjct: 341 LSKDGEWL 348


>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 RLSDEGEWL 9
R +DEG W+
Sbjct: 496 RTTDEGTWV 504


>sp|Y807_AFV1Y|PUTATIVE transmembrane protein ORF807|Acidianus filamentous virus 1 (isolate

Query: 3 SDEGEWLV 10
+D+GEW++
Sbjct: 791 NDKGEWVI 798


>sp|VG31_BPML5|GENE 31 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 LSDEGEWL 9
LSDE EWL
Sbjct: 169 LSDEMEWL 176


>sp|VG31_BPMD2|GENE 31 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 LSDEGEWL 9
LSDE EWL
Sbjct: 169 LSDEIEWL 176


>sp|D5_FOWPN|PRIMASE D5|Fowlpox virus (strain NVSL) (FPV)

Query: 2 LSDEGEWLV 10
+SD GE+LV
Sbjct: 345 VSDRGEYLV 353


>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57

Query: 1 RLSDEGEW 8
++S+EG+W
Sbjct: 426 KISEEGDW 433


>sp|NS1A_ANV1|NON-STRUCTURAL polyprotein 1A|Avian nephritis virus 1 (ANV-1)

Query: 2 LSDEGEW 8
L D GEW
Sbjct: 815 LEDRGEW 821


>sp|Y114_OSHVF|UNCHARACTERIZED protein ORF114|Ostreid herpesvirus 1 (isolate France)

Query: 5 EGEWL 9
EGEWL
Sbjct: 371 EGEWL 375


>sp|Y006_OSHVF|UNCHARACTERIZED protein ORF6|Ostreid herpesvirus 1 (isolate France)

Query: 5 EGEWL 9
EGEWL
Sbjct: 553 EGEWL 557


>sp|RDRP_PNLV|PROTEIN P2-P3|Poinsettia latent virus (isolate Euphorbia

Query: 2 LSDEGEWLV 10
LS +GEWL
Sbjct: 341 LSKDGEWLA 349


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 2 LSDEGEW 8
+D+GEW
Sbjct: 885 FNDQGEW 891


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 2 LSDEGEW 8
+D+GEW
Sbjct: 885 FNDQGEW 891


>sp|Y076_ABVP|UNCHARACTERIZED protein ORF76|Acidianus bottle-shaped virus (isolate

Query: 5 EGEWL 9
EGEWL
Sbjct: 53 EGEWL 57


>sp|Y060_NPVLD|UNCHARACTERIZED 10.9 kDa protein in|Lymantria dispar multicapsid nuclear

Query: 4 DEGEWL 9
D GEWL
Sbjct: 56 DRGEWL 61


>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human

Query: 3 SDEGEWLV 10
SD G W+V
Sbjct: 442 SDTGAWMV 449


>sp|VP38_GAHVN|38 kDa phosphoprotein|Gallid herpesvirus 2 (strain MD11/75C/R2)

Query: 2 LSDEGEWL 9
L+ EGEWL
Sbjct: 98 LTGEGEWL 105


>sp|VP38_GAHVG|38 kDa phosphoprotein|Gallid herpesvirus 2 (strain GA)

Query: 2 LSDEGEWL 9
L+ EGEWL
Sbjct: 98 LTGEGEWL 105


>sp|PP38_GAHVM|PHOSPHOPROTEIN pp38|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 LSDEGEWL 9
L+ EGEWL
Sbjct: 98 LTGEGEWL 105


>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a

Query: 1 RLSDEGEW 8
++S+EG+W
Sbjct: 426 KVSEEGDW 433


>sp|VP5_APRVF|OUTER capsid protein VP5|Aedes pseudoscutellaris reovirus (isolate France)

Query: 2 LSDEGEWLV 10
L D G WL+
Sbjct: 1034 LGDTGSWLL 1042


>sp|NS1AB_ANV1|NON-STRUCTURAL polyprotein 1AB|Avian nephritis virus 1 (ANV-1)

Query: 2 LSDEGEW 8
L D GEW
Sbjct: 815 LEDRGEW 821


>sp|SPIKE_CVMA5|SPIKE glycoprotein|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 LSDEGEW 8
+ D+GEW
Sbjct: 1147 VQDDGEW 1153


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 4 DEGEWLV 10
+EG WLV
Sbjct: 3910 EEGNWLV 3916


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 4 DEGEWLV 10
+EG WLV
Sbjct: 3829 EEGNWLV 3835


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 4 DEGEWLV 10
+EG WLV
Sbjct: 3820 EEGNWLV 3826




201|Sequence|1001|1010|GEWLVRELNL

>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)

Query: 1 GEWLVRE 7
GEWLVR+
Sbjct: 239 GEWLVRD 245


>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)

Query: 1 GEWLVRE 7
G+WLVR+
Sbjct: 239 GDWLVRD 245


>sp|TOPL_BPT4|DNA topoisomerase large subunit|Enterobacteria phage T4 (Bacteriophage

Query: 1 GEWLVRELN 9
GEW ELN
Sbjct: 480 GEWFTFELN 488


>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69

Query: 2 EWLVRELNL 10
EW+VR+ L
Sbjct: 324 EWIVRQTQL 332


>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26

Query: 2 EWLVRELNL 10
EW+VR+ L
Sbjct: 328 EWIVRQTQL 336


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 1 GEWLVR 6
G+WLVR
Sbjct: 250 GDWLVR 255


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2 EWLVRELNL 10
EW VRE N+
Sbjct: 1008 EWPVREENV 1016


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 2 EWLVRELNL 10
EW VRE N+
Sbjct: 1006 EWPVREENV 1014


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 2 EWLVRELNL 10
EW VRE N+
Sbjct: 1008 EWNVREENV 1016


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 2 EWLVRELNL 10
EW VRE N+
Sbjct: 1008 EWNVREENV 1016


>sp|116L_IIV6|UNCHARACTERIZED protein 116L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 EWLVREL 8
EWLVR++
Sbjct: 59 EWLVRQI 65


>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)

Query: 2 EWLVREL 8
EW+ REL
Sbjct: 2021 EWVTREL 2027


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 2 EWLVREL 8
EW+ REL
Sbjct: 2021 EWVTREL 2027


>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 2 EWLVREL 8
EW+ REL
Sbjct: 2021 EWVTREL 2027


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 2 EWLVREL 8
EW+ REL
Sbjct: 2021 EWVTREL 2027


>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)

Query: 2 EWLVREL 8
EW+ REL
Sbjct: 2021 EWVTREL 2027


>sp|NS1_MUMIM|INITIATOR protein NS1|Murine minute virus (strain MVMi)

Query: 1 GEWLVRELNL 10
G+W R+LN+
Sbjct: 142 GKWWRRQLNV 151




202|Sequence|1006|1015|RELNLPVDRT

>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 ELNLPVDRT 10
ELN P D+T
Sbjct: 1069 ELNAPADKT 1077


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 ELNLPVDRT 10
ELN P D+T
Sbjct: 1070 ELNAPADKT 1078


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 2 ELNLPVDRT 10
ELN P D+T
Sbjct: 1017 ELNAPADKT 1025


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 ELNLPVDRT 10
ELN P D+T
Sbjct: 1069 ELNAPADKT 1077


>sp|R1AB_CVMJD|REPLICASE polyprotein 1ab|Murine coronavirus (strain defective JHM)

Query: 2 ELNLPVDRT 10
ELN P D+T
Sbjct: 338 ELNAPADKT 346


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 ELNLPVDRT 10
ELN P D+T
Sbjct: 1070 ELNAPADKT 1078


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 2 ELNLPVDRT 10
ELN P D+T
Sbjct: 1017 ELNAPADKT 1025


>sp|ENLYS_BPPHV|ENDOLYSIN phage phivML3 (Lactococcus bacteriophage

Query: 2 ELNLPVD 8
+LNLPVD
Sbjct: 197 KLNLPVD 203


>sp|ENLYS_BPLC2|ENDOLYSIN phage c2

Query: 2 ELNLPVD 8
+LNLPVD
Sbjct: 197 KLNLPVD 203


>sp|ICP4_PSHV1|MAJOR viral transcription factor ICP4|Psittacid herpesvirus 1 (isolate

Query: 1 RELNLPVDR 9
REL LP+DR
Sbjct: 852 RELALPLDR 860


>sp|R1A_GLRV3|REPLICASE protein 1a|Grapevine leafroll-associated virus 3 (isolate

Query: 1 RELNLPVD 8
R LN+P+D
Sbjct: 228 RALNVPID 235


>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate

Query: 1 RELNLPVD 8
R LN+P+D
Sbjct: 228 RALNVPID 235


>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936

Query: 4 NLPVDRT 10
NLP DRT
Sbjct: 417 NLPFDRT 423


>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954

Query: 4 NLPVDRT 10
NLP DRT
Sbjct: 417 NLPFDRT 423


>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945

Query: 4 NLPVDRT 10
NLP DRT
Sbjct: 417 NLPFDRT 423


>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935

Query: 4 NLPVDRT 10
NLP DRT
Sbjct: 417 NLPFDRT 423


>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943

Query: 4 NLPVDRT 10
NLP DRT
Sbjct: 417 NLPFDRT 423


>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto

Query: 4 NLPVDRT 10
NLP DRT
Sbjct: 417 NLPFDRT 423


>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006

Query: 4 NLPVDRT 10
NLP DRT
Sbjct: 417 NLPFDRT 423


>sp|NCAP_TACVF|NUCLEOPROTEIN virus (strain Franze-Fernandez) (TCRV)

Query: 1 RELNLPVDR 9
R+LN+ VDR
Sbjct: 68 RDLNIEVDR 76


>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LNLPVD 8
LNLPVD
Sbjct: 74 LNLPVD 79


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LNLPVD 8
LNLPVD
Sbjct: 74 LNLPVD 79




203|Sequence|1011|1020|PVDRTEGGWI

>sp|VIE3_MUHVS|IMMEDIATE-EARLY protein 3|Murid herpesvirus 1 (strain Smith)

Query: 2 VDRTEGGWI 10
VDRT GG++
Sbjct: 389 VDRTAGGYV 397


>sp|CAPSD_AHEBV|CAPSID protein|Avon-Heathcote Estuary associated kieseladnavirus (AHEaBV)

Query: 1 PVDRTEGGW 9
PVD+ +G W
Sbjct: 164 PVDQDDGWW 172


>sp|DNBI_GAHVM|MAJOR DNA-binding protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 VDRTEGGW 9
V+ EGGW
Sbjct: 1109 VEEAEGGW 1116


>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 VDRTEGGWI 10
VDR E GW+
Sbjct: 289 VDRAEEGWV 297


>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 VDRTEGGWI 10
VDR E GW+
Sbjct: 289 VDRAEEGWV 297


>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 VDRTEGGWI 10
VDR E GW+
Sbjct: 289 VDRAEEGWV 297


>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)

Query: 5 TEGGWI 10
T+GGWI
Sbjct: 133 TKGGWI 138


>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 TEGGWI 10
T+GGWI
Sbjct: 133 TKGGWI 138


>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant

Query: 5 TEGGWI 10
T+GGWI
Sbjct: 133 TKGGWI 138


>sp|PTELO_BPPY5|PROTELOMERASE phage PY54 (Bacteriophage PY54)

Query: 1 PVDRTEGGWI 10
P+ R+E W+
Sbjct: 576 PIRRSEDSWL 585


>sp|VP7_AHSV9|CORE protein VP7|African horse sickness virus 9

Query: 1 PVDRTEGGWI 10
P RT GG+I
Sbjct: 144 PQGRTRGGYI 153


>sp|VP7_AHSV6|CORE protein VP7|African horse sickness virus 6

Query: 1 PVDRTEGGWI 10
P RT GG+I
Sbjct: 144 PQGRTRGGYI 153


>sp|VP7_AHSV|CORE protein VP7|African horse sickness virus (AHSV)

Query: 1 PVDRTEGGWI 10
P RT GG+I
Sbjct: 144 PQGRTRGGYI 153


>sp|CAPS1_MIMIV|CAPSID protein 1|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PVDRTEGGWI 10
P+D+ G W+
Sbjct: 115 PIDKHYGDWL 124


>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain

Query: 4 RTEGGWI 10
+TE GWI
Sbjct: 14 KTEEGWI 20


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 3 DRTEGGWI 10
D TEGG+I
Sbjct: 522 DFTEGGYI 529


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 PVDRTEGGW 9
P+D+ + GW
Sbjct: 461 PIDKFDQGW 469


>sp|BP48_BPMU|BASEPLATE protein gp48|Escherichia phage Mu (Bacteriophage Mu)

Query: 3 DRTEGGWI 10
D TEG W+
Sbjct: 118 DSTEGQWV 125


>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)

Query: 5 TEGGWI 10
T+GGW+
Sbjct: 121 TKGGWL 126


>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)

Query: 1 PVDRTEGGW 9
P+D+ + GW
Sbjct: 462 PIDKFDQGW 470


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1 PVDRTEGGW 9
P+DR GW
Sbjct: 461 PLDRFAQGW 469




204|Sequence|1016|1025|EGGWISLQDL

>sp|GLYCO_IRKV|GLYCOPROTEIN virus (IRKV)

Query: 1 EGGWISLQ 8
+G W+SLQ
Sbjct: 256 DGSWVSLQ 263


>sp|GLYCO_EBLV1|GLYCOPROTEIN bat lyssavirus 1 (strain

Query: 1 EGGWISLQ 8
+G W+SLQ
Sbjct: 256 DGSWVSLQ 263


>sp|GLYCO_ARAV|GLYCOPROTEIN virus (ARAV)

Query: 1 EGGWISLQ 8
+G W+SLQ
Sbjct: 256 DGSWVSLQ 263


>sp|DPOL_POV01|DNA polymerase|Pyramimonas orientalis virus (PoV01)

Query: 2 GGWISLQD 9
GGWIS+ +
Sbjct: 171 GGWISIDE 178


>sp|GLYCO_EBLV2|GLYCOPROTEIN bat lyssavirus 2 (strain

Query: 1 EGGWISLQD 9
+G W+S+Q+
Sbjct: 256 DGSWVSIQN 264


>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 1 EGGWISLQD 9
+G W+S+Q+
Sbjct: 256 DGSWVSIQN 264


>sp|GLYCO_KHUV|GLYCOPROTEIN virus (KHUV)

Query: 1 EGGWISLQD 9
+G W+S+Q+
Sbjct: 256 DGSWVSIQN 264


>sp|Y030_OSHVF|UNCHARACTERIZED protein ORF30|Ostreid herpesvirus 1 (isolate France)

Query: 4 WISLQD 9
WIS+QD
Sbjct: 111 WISMQD 116


>sp|VF859_ASFWA|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 1 EGGWISL 7
+GGWI L
Sbjct: 703 QGGWIGL 709


>sp|VF859_ASFP4|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 1 EGGWISL 7
+GGWI L
Sbjct: 703 QGGWIGL 709


>sp|VF859_ASFM2|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 1 EGGWISL 7
+GGWI L
Sbjct: 703 QGGWIGL 709


>sp|VF859_ASFK5|PROBABLE helicase A859L|African swine fever virus (isolate

Query: 1 EGGWISL 7
+GGWI L
Sbjct: 703 QGGWIGL 709


>sp|VF859_ASFB7|PROBABLE helicase A859L|African swine fever virus (strain

Query: 1 EGGWISL 7
+GGWI L
Sbjct: 703 QGGWIGL 709


>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 EGGWISLQD 9
+G W+S+Q+
Sbjct: 256 DGSWVSIQN 264


>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)

Query: 1 EGGWIS 6
+GGWIS
Sbjct: 134 KGGWIS 139


>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 EGGWIS 6
+GGWIS
Sbjct: 134 KGGWIS 139


>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant

Query: 1 EGGWIS 6
+GGWIS
Sbjct: 134 KGGWIS 139


>sp|TIPJ_LAMBD|TIP attachment protein J|Escherichia phage lambda (Bacteriophage

Query: 2 GGWISLQDL 10
GGW++ +D+
Sbjct: 145 GGWVTEKDI 153


>sp|VG46_ICHVA|PROBABLE major glycoprotein|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 EGGWIS 6
+GGW+S
Sbjct: 526 QGGWVS 531


>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)

Query: 1 EGGWISLQ 8
+G W+S+Q
Sbjct: 256 DGTWVSMQ 263


>sp|Y14F_BPT4|UNCHARACTERIZED 24.6 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 GWISLQD 9
GWI L+D
Sbjct: 195 GWIPLED 201


>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain

Query: 3 GWISLQDL 10
GW LQD+
Sbjct: 410 GWCCLQDV 417


>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 2 GGWISLQDL 10
G W LQDL
Sbjct: 1068 GSWRLLQDL 1076


>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain

Query: 1 EGGWISL 7
EG W+SL
Sbjct: 140 EGNWMSL 146




205|Sequence|1021|1030|SLQDLRKVQR

>sp|GT063_SIFVH|PUTATIVE glycosyltransferase 63|Sulfolobus islandicus filamentous virus

Query: 1 SLQDLRKVQ 9
S++DLRK++
Sbjct: 225 SIEDLRKIE 233


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 2 LQDLRKV 8
LQDLRKV
Sbjct: 940 LQDLRKV 946


>sp|CAPSD_NMV|COAT protein|Narcissus mosaic virus (NMV)

Query: 1 SLQDLRKVQ 9
SL+DL+K++
Sbjct: 26 SLEDLKKIK 34




206|Sequence|1026|1035|RKVQRETARK

>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 RKVQRETARK 10
R+V +ETA+K
Sbjct: 16 RRVSKETAKK 25


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 RKVQRETARK 10
R+V +ETA+K
Sbjct: 16 RRVSKETAKK 25


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 RKVQRETARK 10
R+V +ETA+K
Sbjct: 16 RRVPKETAKK 25


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1 RKVQRETARK 10
R+V +ETA+K
Sbjct: 16 RRVPKETAKK 25




207|Sequence|1031|1040|ETARKSQWKK

***** No hits found ******


208|Sequence|1036|1045|SQWKKWEVVA

>sp|VP1_AQRVA|OUTER capsid protein VP1|Aquareovirus A (isolate Chum

Query: 1 SQWKKW 6
SQWK+W
Sbjct: 82 SQWKEW 87


>sp|GB_MUHVS|ENVELOPE glycoprotein B|Murid herpesvirus 1 (strain Smith)

Query: 3 WKKWEVVA 10
WKKW+ V+
Sbjct: 359 WKKWQTVS 366


>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 1 SQWKKWEVV 9
SQWK W V
Sbjct: 2017 SQWKPWSPV 2025


>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human

Query: 1 SQWKKWEV 8
SQ+K WEV
Sbjct: 449 SQYKFWEV 456


>sp|Y081_OSHVF|UNCHARACTERIZED protein ORF81|Ostreid herpesvirus 1 (isolate France)

Query: 2 QWKKWEVVA 10
+W KW V A
Sbjct: 199 EWIKWNVCA 207


>sp|VP3_ROTSH|PROTEIN VP3|Rotavirus A (isolate RVA/Monkey/South

Query: 1 SQWKKW 6
+ WKKW
Sbjct: 348 ADWKKW 353


>sp|VP3_ROTS1|PROTEIN VP3|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 1 SQWKKW 6
+ WKKW
Sbjct: 348 ADWKKW 353


>sp|LT_POVBO|LARGE T antigen|Bovine polyomavirus (BPyV) (Bos taurus

Query: 1 SQWKKW 6
SQW++W
Sbjct: 75 SQWEQW 80


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 SQWKKW 6
S+WK W
Sbjct: 1083 SRWKSW 1088


>sp|VG57_BPMD2|GENE 57 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 SQWKKWEVVA 10
S W+ W V A
Sbjct: 14 SPWRNWSVAA 23


>sp|GLYCO_SHRV|GLYCOPROTEIN rhabdovirus (SHRV)

Query: 2 QWKKWEV 8
+WKKW +
Sbjct: 385 EWKKWSL 391


>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59

Query: 1 SQWKKW 6
SQW KW
Sbjct: 417 SQWIKW 422


>sp|VG57_BPML5|GENE 57 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 SQWKKWEVVA 10
S W+ W V A
Sbjct: 14 SPWRHWTVAA 23


>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 3 WKKW 6
WKKW
Sbjct: 289 WKKW 292


>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 3 WKKW 6
WKKW
Sbjct: 289 WKKW 292


>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 3 WKKW 6
WKKW
Sbjct: 289 WKKW 292




209|Sequence|1041|1050|WEVVAERAWK

>sp|TEG1_EHV1V|TEGUMENT protein UL46 homolog|Equine herpesvirus 1 (strain V592)

Query: 1 WEVVAERAWK 10
WEVV +R W+
Sbjct: 110 WEVVIKRYWR 119


>sp|TEG1_EHV1B|TEGUMENT protein UL46 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 WEVVAERAWK 10
WEVV +R W+
Sbjct: 110 WEVVIKRYWR 119


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 1 WEVVAERAW 9
WEV E AW
Sbjct: 1231 WEVGCEDAW 1239


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)

Query: 1 WEVVAERAW 9
WEV E AW
Sbjct: 1231 WEVGCEDAW 1239


>sp|TEG1_EHV4|TEGUMENT protein UL46 homolog|Equine herpesvirus 4 (strain 1942)

Query: 1 WEVVAERAWK 10
WEVV + W+
Sbjct: 110 WEVVIKSYWR 119


>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29

Query: 1 WEVVAERAWK 10
W+ V +R WK
Sbjct: 102 WDAVPKRCWK 111


>sp|TERL_BPMU|PROBABLE terminase, large subunit gp28|Escherichia phage Mu (Bacteriophage

Query: 1 WEVVAERAWK 10
W AE+AW+
Sbjct: 252 WSPEAEKAWR 261


>sp|VG13_BPML5|GENE 13 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 EVVAERAW 9
E VAE+AW
Sbjct: 267 ETVAEKAW 274




210|Sequence|1046|1055|ERAWKGGTES

>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate

Query: 1 ERAWKGGTE 9
ER WK G E
Sbjct: 832 ERNWKAGGE 840


>sp|ENV_JEMBR|ENVELOPE glycoprotein|Jembrana disease virus (JDV)

Query: 1 ERAWKGG 7
ER WKGG
Sbjct: 410 ERPWKGG 416


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 2 RAWKGGT 8
R WKGGT
Sbjct: 1493 RKWKGGT 1499


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 2 RAWKGGT 8
R WKGGT
Sbjct: 1493 REWKGGT 1499


Query: 1 ERAWKGGTE 9
ER+W GG +
Sbjct: 1320 ERSWLGGID 1328


>sp|YR476_MIMIV|PUTATIVE AAA family ATPase R476|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 WKGGTES 10
W GG+ES
Sbjct: 646 WVGGSES 652


>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 3 AWKGGTE 9
AW GGT+
Sbjct: 1688 AWYGGTD 1694




211|Sequence|1051|1060|GGTESEMFNK

>sp|VP75_ALHV1|PROBABLE membrane antigen 75|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 GTESEMFNK 10
G ESE++N+
Sbjct: 1222 GVESELYNE 1230


>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58

Query: 3 TESEMFNK 10
+ES++FNK
Sbjct: 328 SESQLFNK 335


>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33

Query: 3 TESEMFNK 10
+ES++FNK
Sbjct: 302 SESQLFNK 309


>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67

Query: 3 TESEMFNK 10
+ES++FNK
Sbjct: 332 SESQLFNK 339


>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52

Query: 3 TESEMFNK 10
+ES++FNK
Sbjct: 333 SESQLFNK 340


>sp|CAPSD_TNAVC|MAJOR capsid protein|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 1 GGTESEMFN 9
GG E+E++N
Sbjct: 35 GGIENEIYN 43


>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P

Query: 1 GGTESEMFNK 10
GG + E+ NK
Sbjct: 230 GGKDDELINK 239




212|Sequence|1056|1065|EMFNKLESIA

>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 1 EMFNKLESI 9
EMFN+LE I
Sbjct: 390 EMFNQLEPI 398


>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1 EMFNKLESI 9
EMFN+LE I
Sbjct: 390 EMFNQLEPI 398


>sp|VF030_IIV3|UNCHARACTERIZED protein 106R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 EMFNKLESIA 10
E+F+KLE +A
Sbjct: 165 ELFDKLERLA 174


>sp|NCAP_GOGV|NUCLEOPROTEIN 1 reptarenavirus (isolate AlRrV1/Boa/USA/BC/2009)

Query: 1 EMFNKL 6
EMFNKL
Sbjct: 140 EMFNKL 145




213|Sequence|1061|1070|LESIATSDIP

>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 SIATSDIP 10
S+AT D+P
Sbjct: 1132 SVATEDVP 1139


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 SIATSDIP 10
S+AT D+P
Sbjct: 1102 SVATEDVP 1109


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 SIATSDIP 10
S+AT D+P
Sbjct: 1132 SVATEDVP 1139


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 SIATSDIP 10
S+AT D+P
Sbjct: 1132 SVATEDVP 1139




214|Sequence|1066|1075|TSDIPRTPVL

>sp|LT_POVHA|LARGE T antigen|Hamster polyomavirus (HaPyV) (Mesocricetus auratus

Query: 2 SDIPRTP 8
+DIPRTP
Sbjct: 211 TDIPRTP 217


>sp|TG21_PSHV1|TEGUMENT protein UL21|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 IPRTPVL 10
IPRTPV+
Sbjct: 211 IPRTPVI 217


>sp|NS1_LDCPR|NON-STRUCTURAL protein 1|Lymantria dispar cypovirus 1 (isolate

Query: 3 DIPRTP 8
D+PRTP
Sbjct: 457 DVPRTP 462


>sp|VP3_LDCPR|PUTATIVE structural protein VP3|Lymantria dispar cypovirus 1 (isolate

Query: 1 TSDIPRTPVL 10
+ ++PR PVL
Sbjct: 693 SHNVPRVPVL 702


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 2 SDIPRTPVL 10
+D P TPVL
Sbjct: 1118 ADAPETPVL 1126


>sp|DPOL1_BPK54|DEPOLYMERASE 1, capsule K8-specific|Klebsiella phage K5-4 (Bacteriophage K5-4)

Query: 1 TSDIPRTP 8
+SDIP TP
Sbjct: 727 SSDIPTTP 734


>sp|MCP_IIV6|MAJOR capsid protein|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 TSDIPRTPVL 10
TSDI PVL
Sbjct: 238 TSDIATAPVL 247




215|Sequence|1071|1080|RTPVLGCCIS

>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2 TPVLGCC 8
TP+L CC
Sbjct: 2065 TPLLDCC 2071


>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)

Query: 2 TPVLGCCIS 10
+P+LG CI+
Sbjct: 884 SPILGYCIA 892


>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 2 TPVLGCCIS 10
+P+LG CI+
Sbjct: 884 SPILGYCIA 892


>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)

Query: 2 TPVLGCCIS 10
+P+LG CI+
Sbjct: 884 SPILGYCIA 892


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 2 TPVLGCCIS 10
+P+LG CI+
Sbjct: 884 SPILGYCIA 892


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 2 TPVLGCCIS 10
+P+LG CI+
Sbjct: 884 SPILGYCIA 892


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 RTPVLGCC 8
R+ V+GCC
Sbjct: 411 RSLVMGCC 418


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 RTPVLGCC 8
R+ V+GCC
Sbjct: 411 RSLVMGCC 418


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 RTPVLGCC 8
R+ V+GCC
Sbjct: 411 RSLVMGCC 418


>sp|GB_EHV4|ENVELOPE glycoprotein B|Equine herpesvirus 4 (strain 1942)

Query: 4 VLGCCI 9
+LGCCI
Sbjct: 20 LLGCCI 25


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 RTPVLGCCI 9
R P L CC+
Sbjct: 64 RLPALECCV 72


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 RTPVLGCCI 9
R P L CC+
Sbjct: 64 RLPALECCV 72


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 RTPVLGCCI 9
R P L CC+
Sbjct: 64 RLPALECCV 72


>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 2 TPVLGCC 8
TP+LG C
Sbjct: 2007 TPILGVC 2013


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 1 RTPVLGCCI 9
R P L CC+
Sbjct: 64 RLPALECCV 72


>sp|R1AB_CVMJD|REPLICASE polyprotein 1ab|Murine coronavirus (strain defective JHM)

Query: 1 RTPVLGCCI 9
R P L CC+
Sbjct: 64 RLPALECCV 72


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 RTPVLGCCI 9
R P L CC+
Sbjct: 64 RLPALECCV 72


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 RTPVLGCCI 9
R P L CC+
Sbjct: 64 RLPALECCV 72


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 RTPVLGCCIS 10
+TPVLG C+
Sbjct: 2884 QTPVLGRCLE 2893


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 RTPVLGCCIS 10
+TPVLG C+
Sbjct: 2885 QTPVLGRCLE 2894


>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)

Query: 2 TPVLGCCI 9
TP CCI
Sbjct: 580 TPANACCI 587


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 1 RTPVLGCC 8
R V+GCC
Sbjct: 413 RQLVMGCC 420


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 RTPVLGCC 8
R V+GCC
Sbjct: 413 RQLVMGCC 420


>sp|GAG_SIVTN|GAG polyprotein|Simian immunodeficiency virus (isolate TAN1)

Query: 1 RTPVLGC 7
RTP+ GC
Sbjct: 468 RTPLWGC 474


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 RTPVLGCC 8
R V+GCC
Sbjct: 413 RQLVMGCC 420


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 RTPVLGCC 8
R V+GCC
Sbjct: 413 RQLVMGCC 420


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 RTPVLGCC 8
R V+GCC
Sbjct: 413 RQLVMGCC 420


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 TPVLGCCIS 10
T VLG C+S
Sbjct: 2218 TAVLGVCLS 2226


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 2 TPVLGC 7
+PVLGC
Sbjct: 887 SPVLGC 892


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 TPVLGCCIS 10
T VLG C+S
Sbjct: 2218 TAVLGVCLS 2226


>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)

Query: 2 TPVLGC 7
+PVLGC
Sbjct: 897 SPVLGC 902


>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 TPVLGC 7
+PVLGC
Sbjct: 897 SPVLGC 902


>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 TPVLGC 7
+PVLGC
Sbjct: 897 SPVLGC 902


>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)

Query: 2 TPVLGC 7
+PVLGC
Sbjct: 897 SPVLGC 902


>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)

Query: 2 TPVLGC 7
+PVLGC
Sbjct: 897 SPVLGC 902


>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)

Query: 2 TPVLGC 7
+PVLGC
Sbjct: 897 SPVLGC 902


>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 2 TPVLGC 7
+PVLGC
Sbjct: 897 SPVLGC 902


>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)

Query: 2 TPVLGC 7
+PVLGC
Sbjct: 897 SPVLGC 902


>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 2 TPVLGC 7
+PVLGC
Sbjct: 897 SPVLGC 902


>sp|SPIKE_CVBF|SPIKE glycoprotein|Bovine coronavirus (strain F15) (BCoV)

Query: 2 TPVLGC 7
+PVLGC
Sbjct: 897 SPVLGC 902


>sp|SPIKE_CVP67|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus

Query: 2 TPVLGC 7
+PVLGC
Sbjct: 883 SPVLGC 888


>sp|PG051_VACCP|PROTEIN OPG051|Vaccinia virus (strain L-IVP) (VACV)

Query: 2 TPVLGCC 8
T V+GCC
Sbjct: 2 TLVMGCC 8




216|Sequence|1076|1085|GCCISRALEP

>sp|VP10_WTV|NON-STRUCTURAL protein Pns10|Wound tumor virus (WTV)

Query: 1 GCCISRALEP 10
GC I+RA EP
Sbjct: 4 GCAIARAFEP 13


>sp|UBC4_MIMIV|PROBABLE bifunctional E2/E3 enzyme R795|Acanthamoeba polyphaga mimivirus

Query: 1 GCCISRAL 8
CCISR L
Sbjct: 111 ACCISRWL 118


>sp|NECK1_BPT4|NECK protein gp13|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 CISRALE 9
CI RALE
Sbjct: 37 CIQRALE 43


>sp|VNS2_AQRVG|NON-STRUCTURAL protein 2|Aquareovirus G (isolate American grass

Query: 3 CISRALEP 10
C++ ALEP
Sbjct: 292 CVAHALEP 299


>sp|VF170_IIV6|UNCHARACTERIZED protein 170L|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 CISRALE 9
CIS+ALE
Sbjct: 199 CISKALE 205


>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P

Query: 1 GCCISRALEP 10
G C SR L P
Sbjct: 83 GVCTSRKLSP 92


>sp|RDRP_OCSVU|RNA-DIRECTED RNA polymerase|Oat chlorotic stunt virus (isolate

Query: 1 GCCISRA 7
GC ISRA
Sbjct: 223 GCVISRA 229


>sp|CEP1_ALHV1|CYTOPLASMIC envelopment protein 1|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 CCISRALE 9
CCI ALE
Sbjct: 108 CCIISALE 115




217|Sequence|1081|1090|RALEPSAVQE

***** No hits found ******


218|Sequence|1086|1095|SAVQEEFMTS

>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 1 SAVQEEFMTS 10
S QE FMTS
Sbjct: 70 STQQESFMTS 79


>sp|CAPSD_BPB03|MAJOR capsid protein|Bacillus phage B103 (Bacteriophage B103)

Query: 3 VQEEFMTS 10
VQ EF+TS
Sbjct: 57 VQNEFLTS 64




219|Sequence|1091|1100|EFMTSRVNWV

>sp|RDRP_ORSVC|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Korean

Query: 1 EFMTSRVN 8
EFM +RVN
Sbjct: 296 EFMCTRVN 303


>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore

Query: 1 EFMTSRVN 8
EFM +RVN
Sbjct: 296 EFMCTRVN 303


>sp|LEF1_NPVOP|LATE expression factor 1|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 FMTSRVNWV 10
FMT R WV
Sbjct: 28 FMTDRPRWV 36


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 3 MTSRVNWV 10
+TSR+ WV
Sbjct: 1221 LTSRLTWV 1228


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 3 MTSRVNWV 10
+TSR+ WV
Sbjct: 1221 LTSRLTWV 1228


>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 EFMTSRVNW 9
F+TS+VN+
Sbjct: 77 RFLTSKVNY 85




220|Sequence|1096|1105|RVNWVVQSSA

>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 RVNWVVQSSA 10
R NW VQS +
Sbjct: 3494 RCNWFVQSDS 3503


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 RVNWVVQSSA 10
R NW VQS +
Sbjct: 3548 RCNWFVQSDS 3557


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 RVNWVVQSSA 10
R NW VQS +
Sbjct: 3551 RCNWFVQSDS 3560


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 1 RVNWVVQSSA 10
R NW VQS +
Sbjct: 3494 RCNWFVQSDS 3503


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 RVNWVVQSSA 10
R NW VQS +
Sbjct: 3548 RCNWFVQSDS 3557


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 RVNWVVQSSA 10
R NW VQS +
Sbjct: 3551 RCNWFVQSDS 3560


>sp|HEMA_I77AG|HEMAGGLUTININ A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 1 RVNWVVQSSA 10
R+NW+V+S+
Sbjct: 162 RLNWLVKSTG 171


>sp|HEMA_I63A2|HEMAGGLUTININ A virus (strain A/Equine/Miami/1/1963

Query: 1 RVNWVVQSSA 10
R+NW+ QS +
Sbjct: 165 RLNWLTQSES 174


>sp|HEMA_I79A7|HEMAGGLUTININ A virus (strain A/Grey

Query: 1 RVNWVVQS 8
R+NW+V+S
Sbjct: 162 RLNWLVKS 169


>sp|HEMA_I76AK|HEMAGGLUTININ A virus (strain A/Duck/New

Query: 1 RVNWVVQS 8
R+NW+V+S
Sbjct: 162 RLNWLVKS 169


>sp|HEMA_I56A1|HEMAGGLUTININ A virus (strain A/Duck/Czechoslovakia/1956

Query: 1 RVNWVVQS 8
R+NW+V+S
Sbjct: 162 RLNWLVKS 169




221|Sequence|1101|1110|VQSSAVDYLH

>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)

Query: 4 SAVDYLH 10
SAVDY+H
Sbjct: 291 SAVDYIH 297


>sp|AKT_MLVAT|AKT kinase-transforming protein|AKT8 murine leukemia virus

Query: 4 SAVDYLH 10
SA+DYLH
Sbjct: 280 SALDYLH 286


>sp|L_IHNVW|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 4 SAVDYLH 10
SAVD+LH
Sbjct: 348 SAVDFLH 354


>sp|L_IHNVO|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 4 SAVDYLH 10
SAVD+LH
Sbjct: 348 SAVDFLH 354


>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)

Query: 4 SAVDYLH 10
SA+DY+H
Sbjct: 291 SAIDYVH 297




222|Sequence|1106|1115|VDYLHLMLVA

>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 2 DYLHLMLVA 10
D LHL+LVA
Sbjct: 1211 DLLHLVLVA 1219


>sp|YL226_MIMIV|UNCHARACTERIZED protein L226|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VDYLHLM 7
+DYLHLM
Sbjct: 654 IDYLHLM 660


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 2 DYLHLM 7
DYLHL+
Sbjct: 160 DYLHLL 165


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 2 DYLHLMLVA 10
D LHL L+A
Sbjct: 1147 DVLHLALIA 1155


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 2 DYLHLMLVA 10
D LHL L+A
Sbjct: 1219 DVLHLALIA 1227


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 2 DYLHLMLVA 10
D LHL L+A
Sbjct: 1219 DVLHLALIA 1227


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2 DYLHLMLVA 10
D LHL L+A
Sbjct: 1219 DVLHLALIA 1227


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 2 DYLHLMLVA 10
D LHL L+A
Sbjct: 1219 DVLHLALIA 1227




223|Sequence|1111|1120|LMLVAMKWLF

>sp|YL114_MIMIV|UNCHARACTERIZED protein L114|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LMLVAMKWLF 10
LML+ + W F
Sbjct: 173 LMLIVLTWRF 182


>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)

Query: 2 MLVAMKW 8
+L+A+KW
Sbjct: 394 LLIALKW 400




224|Sequence|1116|1125|MKWLFEEFAI

>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 MKWLFEEFA 9
M W+FE F+
Sbjct: 1112 MTWVFEVFS 1120


>sp|POL2_SDVS5|RNA2 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 2 KWLFEEFAI 10
K+ FEE+A+
Sbjct: 398 KFFFEEYAL 406


>sp|5051R_ASFP4|PROTEIN MGF 505-1R|African swine fever virus (isolate

Query: 1 MKWLFEEFAI 10
+KWL+E I
Sbjct: 179 IKWLYENLHI 188


>sp|MCE_WTV|PUTATIVE mRNA-capping enzyme P5|Wound tumor virus (WTV)

Query: 2 KWLFEEF 8
+WLFE++
Sbjct: 610 EWLFEKY 616




225|Sequence|1121|1130|EEFAIDGRFC

>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 3 FAIDGR 8
FAIDGR
Sbjct: 1027 FAIDGR 1032


>sp|YR304_MIMIV|UNCHARACTERIZED protein R304|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EEFAIDGRFC 10
E F+IDG C
Sbjct: 101 EIFSIDGNLC 110


>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain

Query: 1 EEFAIDGRFC 10
EEF++D + C
Sbjct: 221 EEFSLDLKLC 230


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 3 FAIDGRF 9
FA++GRF
Sbjct: 1460 FALEGRF 1466


>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate

Query: 1 EEFAIDGRFC 10
EEF++D + C
Sbjct: 221 EEFSLDLKLC 230




226|Sequence|1126|1135|DGRFCISIHD

>sp|UBC_ASFK5|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (isolate

Query: 1 DGRFCISI 8
DGR CISI
Sbjct: 81 DGRLCISI 88


>sp|UBC_ASFB7|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (strain

Query: 1 DGRFCISI 8
DGR CISI
Sbjct: 81 DGRLCISI 88


>sp|UBC_ASFP4|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (isolate

Query: 1 DGRFCISI 8
DGR CISI
Sbjct: 81 DGRVCISI 88


>sp|DPOL_BPSP1|DNA polymerase|Bacillus phage SP01 (Bacteriophage SP01)

Query: 3 RFCISIHD 10
R CI++HD
Sbjct: 810 RICITVHD 817


>sp|UBC_ASFWA|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (isolate

Query: 1 DGRFCISI 8
DG+ CISI
Sbjct: 81 DGKLCISI 88


>sp|UBC_ASFM2|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (isolate

Query: 1 DGRFCISI 8
DG+ CISI
Sbjct: 81 DGKLCISI 88


>sp|Y158B_SIRV1|UNCHARACTERIZED protein 158B|Sulfolobus islandicus rod-shaped virus 1

Query: 3 RFCISIHD 10
++CI+IHD
Sbjct: 119 QYCIAIHD 126


>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain

Query: 1 DGRFCI 6
DGR+C+
Sbjct: 165 DGRYCV 170


>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)

Query: 1 DGRFCISI 8
+G+FC++I
Sbjct: 168 EGKFCLTI 175


>sp|UBC3_MIMIV|PROBABLE ubiquitin-conjugating enzyme E2 R521|Acanthamoeba polyphaga mimivirus

Query: 1 DGRFCISI 8
DG+ C+SI
Sbjct: 1302 DGKVCLSI 1309


>sp|NSP1_ROTB4|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Cow/United

Query: 3 RFCISIH 9
R CISIH
Sbjct: 247 RNCISIH 253


>sp|NSP1_ROTW3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Cow/United

Query: 3 RFCISIH 9
R CISIH
Sbjct: 247 RNCISIH 253


>sp|NSP1_ROTRF|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1])

Query: 3 RFCISIH 9
R CISIH
Sbjct: 247 RNCISIH 253


>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United

Query: 3 RFCISIH 9
R CISIH
Sbjct: 247 RNCISIH 253


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 1 DGRFCIS 7
DG+FC S
Sbjct: 356 DGQFCYS 362


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 1 DGRFCIS 7
DG+FC S
Sbjct: 356 DGQFCYS 362


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 2 GRFCISI 8
G FC+SI
Sbjct: 261 GAFCVSI 267


>sp|VP03_EHV2|PROBABLE membrane antigen 3|Equine herpesvirus 2 (strain 86/87)

Query: 1 DGRFCISIHD 10
DGR + +HD
Sbjct: 1269 DGRHLVLLHD 1278


>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 3 RFCISIHD 10
+FC IHD
Sbjct: 486 QFCAFIHD 493


>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 3 RFCISIHD 10
+FC IHD
Sbjct: 486 QFCAFIHD 493


>sp|5054R_ASFM2|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 5 CISIHD 10
CI IHD
Sbjct: 218 CIDIHD 223


>sp|YR637_MIMIV|PUTATIVE F-box protein R637|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GRFCISIHD 10
G+FC++ D
Sbjct: 27 GKFCLTCRD 35




227|Sequence|1131|1140|ISIHDEVRYL

>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22

Query: 2 SIHDEVRYL 10
S+HD RYL
Sbjct: 419 SVHDTYRYL 427


>sp|MREP_FBNY2|MASTER replication protein|Faba bean necrotic yellows virus

Query: 1 ISIHDEVRYL 10
+S+HD ++YL
Sbjct: 19 LSLHDSMKYL 28


>sp|MREP_FBNY1|MASTER replication protein|Faba bean necrotic yellows virus

Query: 1 ISIHDEVRYL 10
+S+HD ++YL
Sbjct: 19 LSLHDSMKYL 28


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 1 ISIHDEVRY 9
I IHDEV+Y
Sbjct: 163 IFIHDEVQY 171


>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38

Query: 2 SIHDEVRYL 10
S+HD RY+
Sbjct: 423 SVHDTYRYI 431


>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49

Query: 3 IHDEVRYL 10
IHD RYL
Sbjct: 425 IHDTYRYL 432


>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23

Query: 2 SIHDEVRYL 10
++HD RYL
Sbjct: 419 AVHDTYRYL 427


>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 1 ISIHDEVRY 9
I++H+EV Y
Sbjct: 523 INVHNEVNY 531


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 1 ISIHDEVRY 9
I++H+EV Y
Sbjct: 523 INVHNEVNY 531


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 1 ISIHDEVRY 9
I++H+EV Y
Sbjct: 522 INVHNEVNY 530


>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20

Query: 1 ISIHDEVRY 9
I++H+EV Y
Sbjct: 524 INVHNEVNY 532


>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)

Query: 3 IHDEVRYL 10
IHD+VR L
Sbjct: 133 IHDDVRSL 140


>sp|RSAMI_BPPM6|RADICAL SAM Nalpha-GlyT isomerase|Pseudomonas phage M6

Query: 1 ISIHDEVRYL 10
I HD++R+L
Sbjct: 277 IVTHDDIRHL 286


>sp|PORTL_BPMU|PORTAL protein|Escherichia phage Mu (Bacteriophage Mu)

Query: 3 IHDEVR 8
+HDEVR
Sbjct: 320 VHDEVR 325


>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37

Query: 2 SIHDEVRYL 10
S+HD RY+
Sbjct: 424 SVHDLYRYI 432


>sp|PIF1_NPVAC|PER os infectivity factor 1|Autographa californica nuclear

Query: 4 HDEVRY 9
H+EVRY
Sbjct: 28 HEEVRY 33


>sp|DPOLA_BPPM6|DNA-DIRECTED DNA polymerase|Pseudomonas phage M6

Query: 1 ISIHDEVRY 9
I +HDE+ +
Sbjct: 609 IQVHDEIAF 617


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 IHDEVRYL 10
+HD+V Y+
Sbjct: 6040 VHDQVNYV 6047


>sp|MREP_SCSVF|MASTER replication protein|Subterranean clover stunt virus (strain

Query: 1 ISIHDEVRYL 10
+S+H+ ++YL
Sbjct: 19 LSLHESMKYL 28




228|Sequence|1136|1145|EVRYLVREED

>sp|YL066_MIMIV|PUTATIVE ankyrin repeat protein L66|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 VRYLVREE 9
V+YL+RE+
Sbjct: 124 VKYLIRED 131


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 2 VRYLVREED 10
++YL +EED
Sbjct: 1568 IKYLEQEED 1576




229|Sequence|1141|1150|VREEDRYRAA

>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate

Query: 1 VREEDRYRAA 10
+ EE+RYRAA
Sbjct: 353 IEEEERYRAA 362


>sp|EA31_LAMBD|PROTEIN ea31|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 REEDRYRA 9
R+ED++RA
Sbjct: 202 RQEDKHRA 209


>sp|U147A_HCMVM|UNCHARACTERIZED protein UL147A|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 VREEDRYRA 9
VREE YRA
Sbjct: 49 VREEQDYRA 57




230|Sequence|1146|1155|RYRAALALQI

***** No hits found ******


231|Sequence|1151|1160|LALQITNLLT

***** No hits found ******


232|Sequence|1156|1165|TNLLTRCMFA

>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 TNLLTRCM 8
TN++TRC+
Sbjct: 2154 TNIVTRCL 2161


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 1 TNLLTRC 7
TN+L+RC
Sbjct: 1567 TNILSRC 1573


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 1 TNLLTRC 7
TN+L+RC
Sbjct: 1567 TNILSRC 1573


>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 1 TNLLTRC 7
TN+L+RC
Sbjct: 1576 TNILSRC 1582


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 TNLLTRCM 8
TN++TRC+
Sbjct: 2154 TNIVTRCL 2161


>sp|L_SFTS|RNA-DIRECTED RNA polymerase L|Dabie bandavirus (Severe fever with

Query: 1 TNLLTRCM 8
+NLLT+C+
Sbjct: 1219 SNLLTQCL 1226


>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)

Query: 4 LTRCMFA 10
LTRC++A
Sbjct: 212 LTRCVYA 218


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 2 NLLTRCM 8
NLLT+C+
Sbjct: 1220 NLLTQCL 1226


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1 TNLLTRCMFA 10
++LLT C FA
Sbjct: 3944 SHLLTHCSFA 3953


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 TNLLTRCMFA 10
++LLT C FA
Sbjct: 3944 SHLLTHCSFA 3953


>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 NLLTRC 7
NLLTRC
Sbjct: 200 NLLTRC 205


>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 NLLTRC 7
NLLTRC
Sbjct: 200 NLLTRC 205


>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 NLLTRC 7
NLLTRC
Sbjct: 200 NLLTRC 205


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 1 TNLLTRCMFA 10
++LLT C FA
Sbjct: 3976 SSLLTLCAFA 3985


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 TNLLTRCMFA 10
++LLT C FA
Sbjct: 3987 SSLLTLCAFA 3996


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 TNLLTRCMFA 10
++LLT C FA
Sbjct: 3976 SSLLTLCAFA 3985


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 TNLLTRCMFA 10
++LLT C FA
Sbjct: 3987 SSLLTLCAFA 3996


>sp|VE6_HPV68|PROTEIN E6|Human papillomavirus 68

Query: 2 NLLTRCM 8
NLL RCM
Sbjct: 100 NLLIRCM 106


>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39

Query: 2 NLLTRCM 8
NLL RCM
Sbjct: 100 NLLIRCM 106




233|Sequence|1161|1170|RCMFAYKLGL

>sp|VF439_IIV6|PROBABLE kinase 439L|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 MFAYKLGL 10
MFAY LG+
Sbjct: 177 MFAYTLGI 184


>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus

Query: 1 RCMFAYKLGL 10
RC ++LGL
Sbjct: 138 RCFLPHRLGL 147


>sp|RDRP_ACLSA|RNA-DIRECTED RNA polymerase|Apple chlorotic leaf spot virus

Query: 4 FAYKLG 9
FAYKLG
Sbjct: 1805 FAYKLG 1810


>sp|RDRP_SHVX|RNA replication protein|Shallot virus X (ShVX)

Query: 3 MFAYKLG 9
+FAY+LG
Sbjct: 1583 LFAYRLG 1589


>sp|RDRP_ACLSP|RNA-DIRECTED RNA polymerase|Apple chlorotic leaf spot virus

Query: 4 FAYKLG 9
FAYKLG
Sbjct: 1804 FAYKLG 1809


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 2 CMFAYKLGL 10
C+FAY + L
Sbjct: 621 CLFAYLVNL 629


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 2 CMFAYKLGL 10
C+FAY + L
Sbjct: 621 CLFAYLVNL 629


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 2 CMFAYKLGL 10
C+FAY + L
Sbjct: 621 CLFAYLVNL 629


>sp|VU3_HHV7J|PROTEIN U3|Human herpesvirus 7 (strain JI)

Query: 1 RCMFAYKL 8
RC++AY L
Sbjct: 192 RCLYAYVL 199




234|Sequence|1166|1175|YKLGLNDLPQ

>sp|CAPSD_AQRVC|INNER capsid protein VP3|Aquareovirus C (isolate Golden

Query: 1 YKLGLNDLP 9
Y++G NDLP
Sbjct: 1177 YRVGTNDLP 1185


>sp|TARGB_BPMU|ATP-DEPENDENT target DNA activator B|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 YKLGLNDLPQ 10
++LG+ND P+
Sbjct: 141 FELGMNDAPR 150


>sp|TARGB_BPD10|ATP-DEPENDENT target DNA activator B|Escherichia phage D108 (Bacteriophage D108)

Query: 1 YKLGLNDLPQ 10
++LG+ND P+
Sbjct: 141 FELGMNDAPR 150


>sp|CAPSD_AQRVG|INNER capsid protein VP3|Aquareovirus G (isolate American grass

Query: 1 YKLGLNDLP 9
Y+ G N+LP
Sbjct: 1178 YQFGTNELP 1186


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 3 LGLNDLPQ 10
LGL+D+P+
Sbjct: 2407 LGLSDVPE 2414


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 3 LGLNDLPQ 10
LGL+D+P+
Sbjct: 2407 LGLSDVPE 2414


>sp|YR383_MIMIV|UNCHARACTERIZED protein R383|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 LGLNDLP 9
LG+ND+P
Sbjct: 253 LGVNDIP 259




235|Sequence|1171|1180|NDLPQSVAFF

>sp|E1BS_ADECG|E1B protein, small T-antigen|Canine adenovirus serotype 1 (strain

Query: 1 NDLPQSV 7
NDLP+SV
Sbjct: 136 NDLPESV 142


>sp|E1BS_ADECR|E1B protein, small T-antigen|Canine adenovirus serotype 1 (strain

Query: 1 NDLPQSV 7
NDLP+SV
Sbjct: 136 NDLPESV 142


>sp|E1BS_ADECC|E1B protein, small T-antigen|Canine adenovirus serotype 1 (strain

Query: 1 NDLPQSV 7
NDLP+SV
Sbjct: 136 NDLPESV 142


>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 2 DLPQSVAFF 10
D+PQ V FF
Sbjct: 341 DIPQLVVFF 349


>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 2 DLPQSVAFF 10
D+PQ V FF
Sbjct: 341 DIPQLVVFF 349


>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 2 DLPQSVAFF 10
D+PQ V FF
Sbjct: 341 DIPQLVVFF 349


>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 2 DLPQSVAFF 10
D+PQ V FF
Sbjct: 341 DIPQLVVFF 349


>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 2 DLPQSVAFF 10
D+PQ V FF
Sbjct: 341 DIPQLVVFF 349




236|Sequence|1176|1185|SVAFFSAVDI

>sp|A18_YLDV|TRANSCRIPT termination protein A18|Yaba-like disease virus (YLDV)

Query: 2 VAFFSAVDI 10
+ FFS++DI
Sbjct: 47 IGFFSSIDI 55


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 2 VAFFSAVDI 10
VA+FS VD+
Sbjct: 2612 VAYFSPVDL 2620




237|Sequence|1181|1190|SAVDIDRCLR

>sp|NEC2_ALHV1|NUCLEAR egress protein 2|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 SAVDIDRC 8
S++DIDRC
Sbjct: 24 SSLDIDRC 31


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 SAVDIDRCLR 10
+ DID+C+R
Sbjct: 4065 NGTDIDKCVR 4074


>sp|ICP4_GAHVM|MAJOR viral transcription factor ICP4|Gallid herpesvirus 2 (strain

Query: 1 SAVDIDRCL 9
S VD+ RCL
Sbjct: 1408 SVVDLSRCL 1416


>sp|ICP4_GAHVG|MAJOR viral transcription factor ICP4|Gallid herpesvirus 2 (strain GA)

Query: 1 SAVDIDRCL 9
S VD+ RCL
Sbjct: 502 SVVDLSRCL 510


>sp|YR380_MIMIV|PUTATIVE leucine-rich repeat protein R380|Acanthamoeba polyphaga mimivirus

Query: 2 AVDIDRCL 9
+VDID C+
Sbjct: 278 SVDIDNCI 285


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 1 SAVDIDRCL 9
SA+DI +C+
Sbjct: 2305 SAMDIGKCM 2313


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 SAVDIDRCL 9
SA+DI +C+
Sbjct: 2305 SAMDIGKCM 2313


>sp|NEC2_SHV21|NUCLEAR egress protein 2|Saimiriine herpesvirus 2 (strain 11)

Query: 3 VDIDRC 8
+D+DRC
Sbjct: 25 IDVDRC 30


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 SAVDIDRCL 9
SA+DI +C+
Sbjct: 2330 SAMDIGKCM 2338


>sp|VHR2_SWPVK|PROBABLE host range protein 2|Swinepox virus (strain Kasza) (SWPV)

Query: 4 DIDRCLR 10
DIDRC +
Sbjct: 102 DIDRCTK 108




238|Sequence|1186|1195|DRCLRKEVTM

>sp|ARBH_ASFWA|APOPTOSIS regulator Bcl-2 homolog|African swine fever virus (isolate

Query: 1 DRCLRKEVTM 10
D CL K+VT+
Sbjct: 47 DECLNKQVTI 56


>sp|ARBH_ASFP4|APOPTOSIS regulator Bcl-2 homolog|African swine fever virus (isolate

Query: 1 DRCLRKEVTM 10
D CL K+VT+
Sbjct: 47 DECLNKQVTI 56


>sp|ARBH_ASFM2|APOPTOSIS regulator Bcl-2 homolog|African swine fever virus (isolate

Query: 1 DRCLRKEVTM 10
D CL K+VT+
Sbjct: 47 DECLNKQVTI 56


>sp|ARBH_ASFE4|APOPTOSIS regulator Bcl-2 homolog|African swine fever virus (strain

Query: 1 DRCLRKEVTM 10
D CL K+VT+
Sbjct: 47 DECLNKQVTI 56


>sp|ARBH_ASFB7|APOPTOSIS regulator Bcl-2 homolog|African swine fever virus (strain

Query: 1 DRCLRKEVTM 10
D CL K+VT+
Sbjct: 47 DECLNKQVTI 56


>sp|ARBH_ASFK5|APOPTOSIS regulator Bcl-2 homolog|African swine fever virus (isolate

Query: 1 DRCLRKEVTM 10
D CL K+VT+
Sbjct: 47 DDCLNKQVTI 56


>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain

Query: 1 DRCLRKEVTM 10
D CLR VTM
Sbjct: 246 DGCLRNCVTM 255


>sp|MCE_ASFM2|MRNA-CAPPING enzyme|African swine fever virus (isolate

Query: 2 RCLRKEV 8
RCL++EV
Sbjct: 526 RCLKREV 532


>sp|MCE_ASFK5|MRNA-CAPPING enzyme|African swine fever virus (isolate

Query: 2 RCLRKEV 8
RCL++EV
Sbjct: 526 RCLKREV 532


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DRCLRKEVT 9
+ CLR++VT
Sbjct: 1146 EECLRRKVT 1154


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DRCLRKEVT 9
+ CLR+ VT
Sbjct: 1146 EECLRRRVT 1154


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DRCLRKEVT 9
+ CLR+ VT
Sbjct: 1146 EECLRRRVT 1154


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DRCLRKEVT 9
+ CLR+ VT
Sbjct: 1146 EECLRRRVT 1154


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 DRCLRKEVT 9
+ CLR+ VT
Sbjct: 1146 EECLRRRVT 1154




239|Sequence|1191|1200|KEVTMDCKTP

>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 2 EVTMDCK 8
EVT+DC+
Sbjct: 407 EVTLDCE 413


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 2 EVTMDCK 8
EVT+DC+
Sbjct: 479 EVTLDCE 485


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 2 EVTMDCK 8
EVT+DC+
Sbjct: 479 EVTLDCE 485


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2 EVTMDCK 8
EVT+DC+
Sbjct: 479 EVTLDCE 485


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 2 EVTMDCK 8
EVT+DC+
Sbjct: 479 EVTLDCE 485


>sp|RDRP_AHNNV|RNA-DIRECTED RNA polymerase|Atlantic halibut nervous necrosis virus

Query: 3 VTMDCKTP 10
+ DCKTP
Sbjct: 772 LVTDCKTP 779


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1 KEVTMDCK 8
++VT+DCK
Sbjct: 800 QKVTVDCK 807


>sp|SPIKE_BCHK4|SPIKE glycoprotein|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 KEVTMDCK 8
++VT+DCK
Sbjct: 799 QKVTVDCK 806


>sp|SPIKE_BC133|SPIKE glycoprotein|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 KEVTMDCK 8
++VT+DCK
Sbjct: 799 QKVTVDCK 806


>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 VTMDCKTP 10
+ MDC TP
Sbjct: 902 IWMDCSTP 909


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 2 EVTMDCK 8
EVT+DC+
Sbjct: 479 EVTLDCE 485


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 2 EVTMDCK 8
EVT+DC+
Sbjct: 479 EVTLDCE 485


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2 EVTMDCK 8
EVT+DC+
Sbjct: 479 EVTLDCE 485


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 2 EVTMDCK 8
EVT+DC+
Sbjct: 479 EVTLDCE 485


>sp|VF022_IIV6|PUTATIVE helicase 022L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 KEVTMDCK 8
KEV +DC+
Sbjct: 675 KEVAIDCQ 682


>sp|L_BCNVU|RNA-DIRECTED RNA polymerase L|Bear Canyon mammarenavirus (isolate Mouse/United

Query: 2 EVTMDCKT 9
+ MDCKT
Sbjct: 1874 QFVMDCKT 1881


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2 EVTMDCK 8
EVT+DC+
Sbjct: 475 EVTVDCE 481


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2 EVTMDCK 8
EVT+DC+
Sbjct: 475 EVTVDCE 481


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2 EVTMDCK 8
EVT+DC+
Sbjct: 471 EVTVDCE 477


>sp|ENV_NPVLD|ENVELOPE fusion protein|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 2 EVTMDC 7
E+TMDC
Sbjct: 441 ELTMDC 446


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 3 VTMDCKTP 10
+T DC TP
Sbjct: 2812 LTRDCTTP 2819




240|Sequence|1196|1205|DCKTPSNPTG

>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 3 KTPSNPTG 10
+TPSNP G
Sbjct: 1192 QTPSNPRG 1199


>sp|V8_SPTNK|STRUCTURAL protein V8|Sputnik virophage

Query: 2 CKTPSNPTG 10
TPSNPTG
Sbjct: 22 TNTPSNPTG 30


>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)

Query: 1 DCKTPSNPTG 10
DC P P+G
Sbjct: 144 DCFAPGGPSG 153


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 DCKTPSNPTG 10
D K P PTG
Sbjct: 2884 DTKAPEPPTG 2893


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 3 KTPSNPTG 10
KTP NP G
Sbjct: 1164 KTPKNPRG 1171


>sp|MCP_PSHV1|MAJOR capsid protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 DCKTPSNPT 9
DC+ PS P+
Sbjct: 124 DCEVPSRPS 132


>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 DCKTPSNPT 9
DC+ P+N T
Sbjct: 295 DCRRPNNNT 303


>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 1 DCKTPSNPTG 10
DCK P+N G
Sbjct: 313 DCKNPNNDKG 322


>sp|VP6_BTV2A|HELICASE VP6-A|Bluetongue virus 2 (isolate USA)

Query: 1 DCKTPSNPT 9
D KTP PT
Sbjct: 197 DEKTPEEPT 205


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 4 TPSNPTG 10
TPSNP G
Sbjct: 1194 TPSNPVG 1200


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 4 TPSNPTG 10
TPSNP G
Sbjct: 1177 TPSNPVG 1183


>sp|PHOSP_MPV15|PHOSPHOPROTEIN pneumonia virus (strain 15)

Query: 2 CKTPSNP 8
CK P NP
Sbjct: 101 CKVPDNP 107


>sp|P32_MCMVK|UNCHARACTERIZED protein p32|Maize chlorotic mottle virus (isolate

Query: 1 DCKTPSNPT 9
DCK P PT
Sbjct: 176 DCKRPIQPT 184


>sp|KFMS_FSVMD|TYROSINE-PROTEIN kinase transforming protein fms|Feline sarcoma virus (strain

Query: 2 CKTPSNPTG 10
C P NP G
Sbjct: 118 CTEPGNPRG 126


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 2 CKTPSNPT 9
KTP NPT
Sbjct: 900 IKTPVNPT 907




241|Sequence|1201|1210|SNPTGMERRY

>sp|ORF1_LRVLG|PUTATIVE ORF1 protein|Leishmania RNA virus 1 -

Query: 2 NPTGMERRY 10
N TG++RR+
Sbjct: 29 NSTGIDRRW 37


>sp|TRX2_PSHV1|TRIPLEX capsid protein 2|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 NPTGMERRY 10
+PTG RRY
Sbjct: 264 DPTGGARRY 272


>sp|FIB37_BPS16|LONG tail fiber protein Gp37|Salmonella phage S16 (Salmonella phage

Query: 1 SNPTGMERR 9
S+PTG+E R
Sbjct: 410 SSPTGIEGR 418


>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40

Query: 1 SNPTGMERRY 10
+NP +ER Y
Sbjct: 40 ANPATLERHY 49




242|Sequence|1206|1215|MERRYGIPQG

>sp|MVP_RGDV|MOVEMENT protein|Rice gall dwarf virus (RGDV)

Query: 2 ERRYGIP 8
+RRYG+P
Sbjct: 347 DRRYGLP 353


>sp|POL_FLV|GAG-POL polyprotein|Feline leukemia virus

Query: 4 RYGIPQ 9
RYGIPQ
Sbjct: 1471 RYGIPQ 1476


>sp|ORF23_TTVV7|PROBABLE protein VP2|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 1 MERRYGIPQG 10
+ RYGIP G
Sbjct: 42 LAERYGIPGG 51


>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 3 RRYGIPQG 10
++YG+P+G
Sbjct: 1024 KKYGVPRG 1031


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 3 RRYGIPQG 10
++YG+P+G
Sbjct: 1024 KKYGVPRG 1031


>sp|DPOL_RSIV|DNA polymerase|Red sea bream iridovirus (RSIV)

Query: 1 MERRYGIPQG 10
++ +YG+P+G
Sbjct: 866 LKHQYGVPEG 875


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 YGIPQG 10
+GIPQG
Sbjct: 588 FGIPQG 593


>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 YGIPQG 10
+GIPQG
Sbjct: 588 FGIPQG 593


>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)

Query: 3 RRYGIPQG 10
+R+G+P G
Sbjct: 927 KRHGVPSG 934


>sp|ORF24_TTVV7|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 1 MERRYGIPQG 10
+ RYGIP G
Sbjct: 42 LAERYGIPGG 51


>sp|TNPA_BPMU|DDE-RECOMBINASE A|Escherichia phage Mu (Bacteriophage Mu)

Query: 4 RYGIPQ 9
RYGIP+
Sbjct: 324 RYGIPE 329




243|Sequence|1211|1220|GIPQGEALDI

>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 2 IPQGEALDI 10
+PQG ALDI
Sbjct: 967 LPQGLALDI 975


>sp|MOR_BPMU|MIDDLE operon regulator|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 IPQGEALD 9
IP+G+ALD
Sbjct: 71 IPRGQALD 78


>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain

Query: 1 GIPQGEALDI 10
G+P ALDI
Sbjct: 159 GLPTNHALDI 168




244|Sequence|1216|1225|EALDIYQIIE

>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 EALDIYQIIE 10
E LD+ QIIE
Sbjct: 2874 EPLDLPQIIE 2883


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 EALDIYQIIE 10
E LD+ QIIE
Sbjct: 2874 EPLDLPQIIE 2883


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 EALDIYQIIE 10
E LD+ QIIE
Sbjct: 2874 EPLDLPQIIE 2883


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 EALDIYQIIE 10
E LD+ QIIE
Sbjct: 2874 EPLDLPQIIE 2883


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 EALDIYQIIE 10
E LD+ QIIE
Sbjct: 2874 EPLDLPQIIE 2883


>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985

Query: 1 EALDIYQII 9
E++++YQI+
Sbjct: 523 ESMEVYQIL 531


>sp|RPOL_BPKMV|DNA-DIRECTED RNA polymerase|Pseudomonas phage phiKMV

Query: 4 DIYQIIE 10
D+Y+IIE
Sbjct: 303 DVYEIIE 309


>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 1 EALDIYQIIE 10
EALD +Q+I+
Sbjct: 191 EALDSFQLIK 200


>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 1 EALDIYQIIE 10
EALD +Q+I+
Sbjct: 191 EALDSFQLIK 200


>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 1 EALDIYQIIE 10
EALD +Q+I+
Sbjct: 191 EALDSFQLIK 200


>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 1 EALDIYQIIE 10
EALD +Q+I+
Sbjct: 191 EALDSFQLIK 200


>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 1 EALDIYQIIE 10
EALD +Q+I+
Sbjct: 191 EALDSFQLIK 200




245|Sequence|1221|1230|YQIIELTKGS

>sp|Y043_TNAVC|STRUCTURAL protein ORF43|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 1 YQIIELTKGS 10
Y II LT GS
Sbjct: 24 YDIISLTNGS 33




246|Sequence|1226|1239|LTKGSLEKRSQPGP

>sp|SPIKE_BCHK5|SPIKE glycoprotein|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 LTKGSLEKRSQPGP 14
+TK +L R+ PGP
Sbjct: 690 MTKTNLLARTTPGP 703


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 LTKGSLEKR 9
L+KGSLE R
Sbjct: 5746 LSKGSLEPR 5754


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 LTKGSLEKR 9
L+KGSLE R
Sbjct: 5766 LSKGSLEPR 5774


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 LTKGSLEKR 9
L+KGSLE R
Sbjct: 5796 LSKGSLEPR 5804


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2 TKGSLEKRSQ 11
TKGS+ KRS+
Sbjct: 207 TKGSIPKRSR 216


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 4 GSLEKRSQPGP 14
G +EKR+ GP
Sbjct: 2770 GRMEKRTWKGP 2780


>sp|AN_ALHV1|SHUTOFF alkaline exonuclease|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 LTKGSLEKRSQPG 13
LTKG K + PG
Sbjct: 386 LTKGDSCKHTHPG 398


>sp|NCAP_LATVB|NUCLEOPROTEIN mammarenavirus (isolate Rat/Bolivia/MARU 1924/1965)

Query: 1 LTKGSLEKRSQ 11
LT LEKRS+
Sbjct: 128 LTSAQLEKRSE 138


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 4 GSLEKRSQPGP 14
G +EKR+ GP
Sbjct: 2771 GRMEKRTWHGP 2781


>sp|NCAP_CPXVB|NUCLEOPROTEIN mammarenavirus (isolate Rat/Brasil/BeAn 119303/1970)

Query: 1 LTKGSLEKRSQ 11
LT+ L+KR+Q
Sbjct: 128 LTQSQLDKRTQ 138


>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)

Query: 6 LEKRSQPGP 14
+EK++ PGP
Sbjct: 233 IEKKAFPGP 241






THE END