DPOG1_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|AVKRWLLRSM

>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 1 AVKRWLLRSM 10
AV+R++LRS+
Sbjct: 190 AVRRYMLRSV 199


>sp|PRIL_METTH|DNA primase large subunit PriL|Methanothermobacter thermautotrophicus

Query: 3 KRWLLRS 9
KRW LRS
Sbjct: 422 KRWKLRS 428


>sp|GVPL2_HALSA|GAS vesicle protein L2|Halobacterium salinarum (strain ATCC 700922

Query: 2 VKRWLL 7
VKRWL+
Sbjct: 70 VKRWLV 75


>sp|GVPL1_HALSA|GAS vesicle protein L1|Halobacterium salinarum (strain ATCC 700922

Query: 2 VKRWLL 7
VKRWL+
Sbjct: 78 VKRWLV 83




2|SequenceR|15|6|GVTAGAVKRW

>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 GVTAGAVKRW 10
G+T GA++R+
Sbjct: 361 GITPGAIRRF 370


>sp|MALG_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 1 GVTAGAVK 8
G+TAGA+K
Sbjct: 269 GLTAGALK 276


>sp|YR18_THEPE|UNCHARACTERIZED 18.7 kDa protein in|Thermofilum pendens

Query: 2 VTAGAVKR 9
V AGAVKR
Sbjct: 23 VVAGAVKR 30


>sp|RL3_METMP|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain DSM

Query: 5 GAVKRW 10
G+VKRW
Sbjct: 208 GSVKRW 213


>sp|RL3_METM7|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C7

Query: 5 GAVKRW 10
G+VKRW
Sbjct: 208 GSVKRW 213


>sp|RL3_METM6|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C6

Query: 5 GAVKRW 10
G+VKRW
Sbjct: 208 GSVKRW 213


>sp|RL3_METM5|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C5

Query: 5 GAVKRW 10
G+VKRW
Sbjct: 208 GSVKRW 213




3|SequenceR|20|11|PVPGPGVTAG

>sp|GUAAB_SULTO|GMP synthase [glutamine-hydrolyzing] subunit B|Sulfurisphaera tokodaii

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 191 PFPGPGL 197


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 192 PFPGPGL 198


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 192 PFPGPGL 198


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 192 PFPGPGL 198


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 192 PFPGPGL 198


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 192 PFPGPGL 198


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 192 PFPGPGL 198


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 192 PFPGPGL 198


>sp|RISB_METAC|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VPGPGVT 8
+PGPG+T
Sbjct: 103 IPGPGMT 109


>sp|GUAAB_METM7|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 187 PFPGPGL 193


>sp|GUAAB_METJA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocaldococcus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 187 PFPGPGL 193


>sp|RISB_METBF|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VPGPGVT 8
+PGPG+T
Sbjct: 103 IPGPGMT 109


>sp|GUAAB_METVS|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus vannielii

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 187 PFPGPGL 193


>sp|RISB_METMA|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VPGPGVT 8
+PGPG+T
Sbjct: 103 IPGPGMT 109


>sp|GUAAB_METMP|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 187 PFPGPGL 193


>sp|GUAAB_THEAC|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma acidophilum

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 186 PFPGPGL 192


>sp|GUAAB_HALMA|GMP synthase [glutamine-hydrolyzing] subunit B|Haloarcula marismortui

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 187 PFPGPGL 193


>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 1 PVPGPGVT 8
P PGPG++
Sbjct: 185 PFPGPGLS 192


>sp|GUAAB_PICTO|GMP synthase [glutamine-hydrolyzing] subunit B|Picrophilus torridus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 184 PFPGPGL 190


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 185 PFPGPGL 191


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PVPGPGV 7
P+PG GV
Sbjct: 289 PIPGEGV 295


>sp|GUAAB_NATPD|GMP synthase [glutamine-hydrolyzing] subunit B|Natronomonas pharaonis

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 187 PFPGPGL 193


>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 186 PFPGPGL 192


>sp|GUAAB_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus furiosus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 192 PFPGPGL 198


>sp|GUAAB_METAR|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocella arvoryzae

Query: 1 PVPGPGVT 8
P PGPG++
Sbjct: 186 PFPGPGLS 193


>sp|GUAAB_THEKO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermococcus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 186 PFPGPGL 192


>sp|GUAAB_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus abyssi

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 187 PFPGPGL 193


>sp|GUAAB_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit B|Archaeoglobus fulgidus

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 185 PFPGPGL 191


>sp|GUAAB_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus horikoshii

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 187 PFPGPGL 193


>sp|RS3A_METTP|SMALL ribosomal subunit protein eS1|Methanothrix thermoacetophila (strain

Query: 2 VPGPGVTAG 10
VP P VTAG
Sbjct: 202 VPEPTVTAG 210


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGPGV 7
PGPGV
Sbjct: 255 PGPGV 259


>sp|GUAAB_METMA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina mazei

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 186 PFPGPGL 192


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 186 PFPGPGL 192


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 1 PVPGPGV 7
P PGPG+
Sbjct: 186 PFPGPGL 192


>sp|RS11_KORCO|SMALL ribosomal subunit protein uS11|Korarchaeum cryptofilum (strain

Query: 2 VPGPGVTA 9
+PGPG TA
Sbjct: 88 IPGPGATA 95


>sp|GUAA_AERPE|GMP synthase [glutamine-hydrolyzing]|Aeropyrum pernix (strain ATCC

Query: 1 PVPGPGV 7
PVPGPG+
Sbjct: 389 PVPGPGL 395


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 1 PVPGPGVT 8
P+P GVT
Sbjct: 298 PIPDSGVT 305


>sp|RS11_PYRAE|SMALL ribosomal subunit protein uS11|Pyrobaculum aerophilum (strain

Query: 2 VPGPGVTA 9
VPGPG +A
Sbjct: 89 VPGPGASA 96


>sp|RS11_PYRAR|SMALL ribosomal subunit protein uS11|Pyrobaculum arsenaticum (strain DSM

Query: 2 VPGPGVTA 9
VPGPG +A
Sbjct: 94 VPGPGASA 101


>sp|RS11_PYRIL|SMALL ribosomal subunit protein uS11|Pyrobaculum islandicum (strain DSM

Query: 2 VPGPGVTA 9
VPGPG +A
Sbjct: 95 VPGPGASA 102


>sp|RS11_PYRCJ|SMALL ribosomal subunit protein uS11|Pyrobaculum calidifontis (strain DSM

Query: 2 VPGPGVTA 9
VPGPG +A
Sbjct: 97 VPGPGASA 104


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein

Query: 2 VPGPG 6
VPGPG
Sbjct: 56 VPGPG 60




4|SequenceR|25|16|WRGPAPVPGP

>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RGPAPVPG 9
RG AP+PG
Sbjct: 165 RGKAPIPG 172


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 WRGPAPVPG 9
W PAP PG
Sbjct: 234 WGIPAPFPG 242


>sp|RS4E_THEVO|SMALL ribosomal subunit protein eS4|Thermoplasma volcanium (strain ATCC

Query: 3 GPAPVPG 9
GP P+PG
Sbjct: 24 GPTPLPG 30


>sp|GCSH2_SULAC|PROBABLE glycine cleavage system H|Sulfolobus acidocaldarius (strain ATCC

Query: 1 WRGPAPVP 8
W GP P P
Sbjct: 74 WAGPVPAP 81


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 3 GPAPVPG 9
GP P+PG
Sbjct: 36 GPTPMPG 42


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 WRGPAPVPG 9
W PAP PG
Sbjct: 236 WGIPAPFPG 244


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GPAPVPGP 10
G APV GP
Sbjct: 258 GGAPVSGP 265


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WRGPAPVP 8
W G AP P
Sbjct: 213 WNGTAPAP 220


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WRGPAPVPGP 10
WR P P P
Sbjct: 152 WRRVVPSPDP 161


>sp|RS10_NANEQ|SMALL ribosomal subunit protein uS10|Nanoarchaeum equitans (strain

Query: 2 RGPAPVP 8
RGP P+P
Sbjct: 35 RGPIPLP 41


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 WRGPAPVPG 9
W PAP PG
Sbjct: 249 WGIPAPFPG 257


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 WRGPAPVPG 9
W PAP PG
Sbjct: 241 WGIPAPFPG 249


>sp|COFD_METAC|2-PHOSPHO-L-LACTATE transferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GPAPVPGP 10
G APV GP
Sbjct: 224 GNAPVSGP 231


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WRGPAPVPGP 10
WR A P P
Sbjct: 380 WRAHADAPSP 389


>sp|RS4E_THEAC|SMALL ribosomal subunit protein eS4|Thermoplasma acidophilum (strain

Query: 3 GPAPVPG 9
GP P PG
Sbjct: 24 GPTPNPG 30


>sp|GCSH2_SACS2|PROBABLE glycine cleavage system H|Saccharolobus solfataricus (strain ATCC

Query: 1 WRGPAPVP 8
W GP P P
Sbjct: 74 WAGPVPAP 81


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 4 PAPVPGP 10
PAP P P
Sbjct: 306 PAPAPQP 312


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 GPAPVPG 9
GP P PG
Sbjct: 43 GPTPFPG 49


>sp|RS10_CENSY|SMALL ribosomal subunit protein uS10|Cenarchaeum symbiosum (strain A)

Query: 2 RGPAPVP 8
+GP P+P
Sbjct: 36 KGPTPLP 42


>sp|RL1_AERPE|LARGE ribosomal subunit protein uL1|Aeropyrum pernix (strain ATCC 700893

Query: 2 RGPAPVPGP 10
RG APVP P
Sbjct: 130 RGKAPVPVP 138


>sp|RS10_PYRNV|SMALL ribosomal subunit protein uS10|Pyrobaculum neutrophilum (strain

Query: 2 RGPAPVP 8
RGP P+P
Sbjct: 40 RGPIPLP 46


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GPAPVPGP 10
G APV GP
Sbjct: 258 GGAPVGGP 265


>sp|RS10_PYRCJ|SMALL ribosomal subunit protein uS10|Pyrobaculum calidifontis (strain

Query: 2 RGPAPVP 8
RGP P+P
Sbjct: 40 RGPIPLP 46


>sp|RS10_PYRAE|SMALL ribosomal subunit protein uS10|Pyrobaculum aerophilum (strain

Query: 2 RGPAPVP 8
RGP P+P
Sbjct: 40 RGPIPLP 46


>sp|RL1_METM5|LARGE ribosomal subunit protein uL1|Methanococcus maripaludis (strain C5

Query: 4 PAPVPG 9
P PVPG
Sbjct: 130 PQPVPG 135


>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 1 WRGPAPVPG 9
W+ A +PG
Sbjct: 312 WKSAAGIPG 320


>sp|RL1_METVS|LARGE ribosomal subunit protein uL1|Methanococcus vannielii (strain ATCC

Query: 4 PAPVPG 9
P PVPG
Sbjct: 130 PQPVPG 135


>sp|RS10_AERPE|SMALL ribosomal subunit protein uS10|Aeropyrum pernix (strain ATCC

Query: 2 RGPAPVP 8
RGP P+P
Sbjct: 36 RGPVPLP 42


>sp|GCSH2_SULTO|PROBABLE glycine cleavage system H|Sulfurisphaera tokodaii (strain DSM

Query: 1 WRGPAPVPG 9
W GP P P
Sbjct: 74 WAGPVPAPA 82


>sp|COFD_METMA|2-PHOSPHO-L-LACTATE transferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GPAPVPGP 10
G APV GP
Sbjct: 224 GNAPVSGP 231


>sp|COFD_METBF|2-PHOSPHO-L-LACTATE transferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GPAPVPGP 10
G APV GP
Sbjct: 224 GNAPVSGP 231


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 1 WRGPAPVPG 9
W+G +PG
Sbjct: 611 WKGEIKLPG 619


>sp|Y085_METJA|UNCHARACTERIZED lipoprotein MJ0085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GPAPVPGP 10
GP P P P
Sbjct: 113 GPCPKPNP 120


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 3 GPAPVPG 9
GP P PG
Sbjct: 36 GPTPKPG 42


>sp|RS10_HYPBU|SMALL ribosomal subunit protein uS10|Hyperthermus butylicus (strain DSM

Query: 2 RGPAPVP 8
RGP P+P
Sbjct: 36 RGPIPLP 42


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 1 WRGPAPVPG 9
W+G +PG
Sbjct: 64 WKGEIKLPG 72


>sp|RL1_METB6|LARGE ribosomal subunit protein uL1|Methanoregula boonei (strain DSM

Query: 2 RGPAPVPG 9
R P P+PG
Sbjct: 130 RMPMPIPG 137


>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus

Query: 1 WRGPAPVPG 9
W+G +PG
Sbjct: 64 WKGEIKLPG 72


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WRGPAPVPG 9
W GP +PG
Sbjct: 221 WDGPYFLPG 229


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WRGPAPVPGP 10
W PV GP
Sbjct: 86 WEAGIPVVGP 95


>sp|RS10_NITMS|SMALL ribosomal subunit protein uS10|Nitrosopumilus maritimus (strain

Query: 2 RGPAPVP 8
+GP P+P
Sbjct: 36 KGPTPLP 42


>sp|RL10_ARCFU|LARGE ribosomal subunit protein uL10|Archaeoglobus fulgidus (strain ATCC

Query: 3 GPAPV-PGP 10
GP P+ PGP
Sbjct: 125 GPTPIPPGP 133




5|SequenceR|30|21|VSSSVWRGPA

>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VSSSVWRG 8
+SS+ WRG
Sbjct: 200 ISSAYWRG 207


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 VWRGP 9
+WRGP
Sbjct: 127 IWRGP 131


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 5 VWRGP 9
+WRGP
Sbjct: 127 IWRGP 131


>sp|Y3680_PYRAE|UPF0282 protein PAE3680|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SSSVWRGPA 10
S S+W GPA
Sbjct: 152 SQSLWHGPA 160


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 5 VWRGP 9
+WRGP
Sbjct: 128 IWRGP 132


>sp|MTRH_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus vannielii (strain

Query: 3 SSVWRGP 9
S VW GP
Sbjct: 92 SEVWEGP 98


>sp|FMDC_METBF|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanosarcina barkeri

Query: 4 SVWRGP 9
SVW+GP
Sbjct: 70 SVWQGP 75


>sp|MTRH_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain

Query: 3 SSVWRGP 9
S VW GP
Sbjct: 92 SEVWDGP 98


>sp|MTRH_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain

Query: 3 SSVWRGP 9
S VW GP
Sbjct: 92 SEVWDGP 98


>sp|RL10E_METKA|LARGE ribosomal subunit protein uL16|Methanopyrus kandleri (strain AV19

Query: 6 WRGPA 10
W+GPA
Sbjct: 12 WKGPA 16


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 2 SSSVWRGPA 10
+ VW GPA
Sbjct: 264 AGPVWLGPA 272




6|SequenceR|35|26|PDSAPVSSSV

>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 PDSAPVSSSV 10
PD APV +S+
Sbjct: 296 PDLAPVVASI 305


>sp|NADK_HALMA|NAD kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PDSAPV 6
PDSAPV
Sbjct: 53 PDSAPV 58




7|SequenceR|40|31|RQGDSPDSAP

>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RQGDSPDSA 9
R+GD PD A
Sbjct: 257 RRGDYPDEA 265


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 3 GDSPDSAP 10
GD PD P
Sbjct: 996 GDRPDGLP 1003


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 3 GDSPDSAP 10
GD P+S P
Sbjct: 84 GDMPNSVP 91


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GDSPDSA 9
GD+PD A
Sbjct: 1526 GDNPDGA 1532


Query: 3 GDSPDSA 9
GD+PD A
Sbjct: 1859 GDNPDGA 1865


>sp|NDK_METS3|NUCLEOSIDE diphosphate kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 DSPDSA 9
DSPDSA
Sbjct: 119 DSPDSA 124


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 1 RQGDSPDSAP 10
RQG S D+AP
Sbjct: 179 RQGISFDAAP 188


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 QGDSPD 7
+GDSPD
Sbjct: 43 RGDSPD 48


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RQGDSPDS 8
RQG +PDS
Sbjct: 380 RQGLNPDS 387




8|SequenceR|45|36|QQQRRRQGDS

***** No hits found ******


9|SequenceR|50|41|QQQQQQQQRR

***** No hits found ******


10|SequenceR|55|46|QQQQQQQQQQ

***** No hits found ******


11|SequenceR|60|51|QPQQPQQQQQ

***** No hits found ******


12|SequenceR|65|56|ESSLVQPQQP

>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 1 ESSLVQPQQP 10
E+++V+P QP
Sbjct: 104 ETTIVEPPQP 113


>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 ESSLVQPQQ 9
ESSL+ PQ+
Sbjct: 81 ESSLLVPQE 89




13|SequenceR|70|61|RLQGGESSLV

>sp|AROA_SULTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RLQGGESS 8
R++GGESS
Sbjct: 145 RIEGGESS 152


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 LQGGESSL 9
++GGESS+
Sbjct: 129 IEGGESSI 136


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RLQGGESSLV 10
+ QGGE+ +V
Sbjct: 545 KFQGGEAKVV 554


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RLQGGESSLV 10
+ QGGE+ +V
Sbjct: 545 KFQGGEAKVV 554


>sp|Y1608_METJA|UNCHARACTERIZED protein MJ1608|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LQGGESSL 9
L+GGE SL
Sbjct: 19 LEGGEKSL 26




14|SequenceR|75|66|DLPNHRLQGG

>sp|ACKA_METMZ|ACETATE kinase|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 DLPNHRL 7
DLPNH++
Sbjct: 56 DLPNHKI 62


>sp|ACKA_METMA|ACETATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DLPNHRL 7
DLPNH++
Sbjct: 56 DLPNHKI 62


>sp|ACKA_METAC|ACETATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLPNHRL 7
DLPNH++
Sbjct: 56 DLPNHKV 62


>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 2 LPNHRLQGG 10
PNH + GG
Sbjct: 175 FPNHLISGG 183


>sp|ACKA_METBF|ACETATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DLPNHRL 7
DLP HR+
Sbjct: 56 DLPTHRV 62


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 DLPNHRLQGG 10
D P H L GG
Sbjct: 137 DKPPHHLSGG 146


>sp|DAPB_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DLPNHRLQG 9
D+PNH +G
Sbjct: 34 DIPNHPKKG 42


>sp|DAPB_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DLPNHRLQG 9
D+PNH +G
Sbjct: 34 DIPNHPKKG 42


>sp|DAPB_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C6 /

Query: 1 DLPNHRLQG 9
D+PNH +G
Sbjct: 34 DIPNHPKKG 42


>sp|DAPB_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C5 /

Query: 1 DLPNHRLQG 9
D+PNH +G
Sbjct: 34 DIPNHPKKG 42


>sp|DAPB_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C7 /

Query: 1 DLPNHRLQG 9
D+PNH +G
Sbjct: 34 DIPNHPKKG 42


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 DLPNHRLQGG 10
D P H L GG
Sbjct: 134 DRPPHHLSGG 143


>sp|RL21_THEAC|LARGE ribosomal subunit protein eL21|Thermoplasma acidophilum (strain

Query: 2 LPNHRLQG 9
+P HR QG
Sbjct: 53 MPYHRFQG 60


>sp|MTIP_METKA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanopyrus kandleri

Query: 1 DLPNHRL 7
DLP HR+
Sbjct: 53 DLPPHRI 59


>sp|FLPA_METTP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanothrix thermoacetophila

Query: 1 DLPNHR 6
DLP+HR
Sbjct: 196 DLPHHR 201


>sp|Y1969_ARCFU|PROTEIN AF_1969|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLPNH 5
DLPNH
Sbjct: 116 DLPNH 120


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 DLPNHRLQGG 10
D P H L GG
Sbjct: 134 DKPPHHLSGG 143


>sp|DAPB_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DLPNHRLQG 9
D+PNH +G
Sbjct: 35 DVPNHPKKG 43


>sp|RL21_THEVO|LARGE ribosomal subunit protein eL21|Thermoplasma volcanium (strain

Query: 2 LPNHRLQG 9
+P HR QG
Sbjct: 53 MPYHRFQG 60


>sp|EF1A_PYRIL|ELONGATION factor 1-alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DLPNHR 6
DLP HR
Sbjct: 101 DLPGHR 106


>sp|EF1A_PYRAE|ELONGATION factor 1-alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DLPNHR 6
DLP HR
Sbjct: 101 DLPGHR 106


>sp|EF1A_CALMQ|ELONGATION factor 1-alpha|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DLPNHR 6
DLP HR
Sbjct: 100 DLPGHR 105


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DLPNHR 6
DLP HR
Sbjct: 101 DLPGHR 106


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DLPNHR 6
DLP HR
Sbjct: 101 DLPGHR 106


>sp|MTQ2_METJA|RELEASE factor glutamine methyltransferase Mtq2|Methanocaldococcus

Query: 1 DLPNHRLQGG 10
+LPN+ +GG
Sbjct: 141 ELPNYLKKGG 150


>sp|Y583_METTM|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 1 DLPNHRLQGG 10
D P H L GG
Sbjct: 134 DRPPHHLSGG 143


>sp|Y142_AERPE|UNCHARACTERIZED HTH-type transcriptional regulator APE_0142|Aeropyrum pernix

Query: 2 LPNHRLQ 8
+PN+RLQ
Sbjct: 171 IPNNRLQ 177


>sp|RS4_HALMA|SMALL ribosomal subunit protein uS4|Haloarcula marismortui (strain ATCC

Query: 1 DLPNHRLQG 9
+ PNH QG
Sbjct: 11 ETPNHPFQG 19


>sp|RS4_NATPD|SMALL ribosomal subunit protein uS4|Natronomonas pharaonis (strain ATCC

Query: 1 DLPNHRLQG 9
+ PNH QG
Sbjct: 11 ETPNHPFQG 19


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DLPNHRL 7
D+PN RL
Sbjct: 497 DIPNRRL 503




15|SequenceR|80|71|SLMQIDLPNH

>sp|ACKA_METBF|ACETATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 4 QIDLPNH 10
Q+DLP H
Sbjct: 54 QVDLPTH 60


>sp|DAPB_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 5 IDLPNH 10
ID+PNH
Sbjct: 33 IDIPNH 38


>sp|DAPB_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 5 IDLPNH 10
ID+PNH
Sbjct: 33 IDIPNH 38


>sp|DAPB_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C7 /

Query: 5 IDLPNH 10
ID+PNH
Sbjct: 33 IDIPNH 38


>sp|DAPB_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C6 /

Query: 5 IDLPNH 10
ID+PNH
Sbjct: 33 IDIPNH 38


>sp|DAPB_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C5 /

Query: 5 IDLPNH 10
ID+PNH
Sbjct: 33 IDIPNH 38


>sp|DAPB_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 IDLPNH 10
ID+PNH
Sbjct: 34 IDVPNH 39


>sp|FLPA_METTP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanothrix thermoacetophila

Query: 2 LMQIDLPNH 10
L ++DLP+H
Sbjct: 192 LRRVDLPHH 200


>sp|FOLD_METBU|BIFUNCTIONAL protein FolD|Methanococcoides burtonii (strain DSM 6242

Query: 2 LMQIDLPNH 10
L+Q+ LP H
Sbjct: 100 LLQLPLPKH 108


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LMQIDLPNH 10
L+Q+ LP H
Sbjct: 89 LLQLPLPGH 97


>sp|FOLD_METBF|BIFUNCTIONAL protein FolD|Methanosarcina barkeri (strain Fusaro /

Query: 2 LMQIDLPNH 10
L+Q+ LP H
Sbjct: 101 LLQLPLPKH 109


>sp|RL18_METTH|LARGE ribosomal subunit protein uL18|Methanothermobacter

Query: 2 LMQIDLPNH 10
L +DLP H
Sbjct: 172 LSPVDLPEH 180


>sp|FOLD_METAC|BIFUNCTIONAL protein FolD|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LMQIDLPNH 10
L+Q+ LP H
Sbjct: 101 LLQLPLPKH 109


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LMQIDLPNH 10
L+Q+ LP H
Sbjct: 101 LLQLPLPEH 109




16|SequenceR|85|76|EHLGRSLMQI

>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 EHLGRSLMQI 10
EH+GR +QI
Sbjct: 424 EHIGRGELQI 433


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 HLGRSLM 8
HLGRS++
Sbjct: 69 HLGRSVL 75


>sp|DTDA_NATPD|D-AMINOACYL-TRNA deacylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EHLGRSLMQI 10
EH+GR L +
Sbjct: 14 EHIGRKLRSL 23




17|SequenceR|90|81|QGFIQEHLGR

>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 IQEHLGR 10
IQEHLG+
Sbjct: 136 IQEHLGK 142


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC

Query: 3 FIQEHLGR 10
FI+E LGR
Sbjct: 8 FIEEQLGR 15


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 2 GFIQEHLGR 10
GF+ HL R
Sbjct: 232 GFVSRHLNR 240


>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FIQEHLGR 10
FI+E +GR
Sbjct: 410 FIEEQIGR 417


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 2 GFIQEHLGR 10
GF EHLG+
Sbjct: 121 GFRLEHLGK 129


>sp|Y1347_HALLT|UPF0173 metal-dependent hydrolase Hlac_1347|Halorubrum lacusprofundi

Query: 2 GFIQEHLG 9
G+IQE+ G
Sbjct: 72 GYIQENFG 79


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 1 QGFIQEHLG 9
+GF EHLG
Sbjct: 124 KGFRLEHLG 132


>sp|Y055_KORCO|UPF0173 metal-dependent hydrolase Kcr_0055|Korarchaeum cryptofilum (strain

Query: 4 IQEHLGR 10
++EHLGR
Sbjct: 198 LKEHLGR 204




18|SequenceR|95|86|PMEGGQGFIQ

>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PMEGGQGFIQ 10
P EG QG ++
Sbjct: 158 PDEGAQGLVK 167


>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 4 GGQGFIQ 10
GG+GFI+
Sbjct: 90 GGEGFIE 96


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PMEGGQ 6
P+EGGQ
Sbjct: 417 PIEGGQ 422


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 2 MEGGQGFIQ 10
+EGG G IQ
Sbjct: 180 VEGGHGNIQ 188


>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PMEGGQGFIQ 10
P+ G GF++
Sbjct: 147 PVRAGSGFVE 156


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GGQGFI 9
GG+GFI
Sbjct: 1582 GGEGFI 1587


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 2 MEGGQGFIQ 10
M GG GF Q
Sbjct: 327 MSGGVGFTQ 335


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PMEGGQGFI 9
P GG+G++
Sbjct: 346 PSSGGEGYL 354


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 MEGGQGFIQ 10
M GG GF Q
Sbjct: 326 MSGGVGFTQ 334


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 2 MEGGQGFIQ 10
M GG GF Q
Sbjct: 328 MSGGVGFTQ 336


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 2 MEGGQGFIQ 10
M GG GF Q
Sbjct: 327 MSGGVGFTQ 335


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 2 MEGGQGFIQ 10
M GG GF Q
Sbjct: 327 MSGGVGFTQ 335


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 1 PMEGGQ 6
P+EGGQ
Sbjct: 426 PVEGGQ 431


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 MEGGQGFIQ 10
M GG GF Q
Sbjct: 326 MSGGVGFTQ 334


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 MEGGQGFIQ 10
M GG GF Q
Sbjct: 337 MSGGVGFTQ 345


>sp|PELO_CENSY|PROTEIN pelota homolog|Cenarchaeum symbiosum (strain A)

Query: 4 GGQGFI 9
GGQGF+
Sbjct: 125 GGQGFV 130


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 2 MEGGQGFIQ 10
M GG GF Q
Sbjct: 324 MSGGVGFTQ 332


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 MEGGQGFIQ 10
M GG GF Q
Sbjct: 337 MSGGVGFTQ 345


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 2 MEGGQGFIQ 10
M GG GF Q
Sbjct: 324 MSGGVGFTQ 332


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 MEGGQGFIQ 10
M GG GF Q
Sbjct: 326 MSGGVGFTQ 334


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 MEGGQGFIQ 10
M GG GF Q
Sbjct: 327 MSGGVGFTQ 335


>sp|TSGBD_HALVD|GLUCOSE ABC transporter permease protein|Haloferax volcanii (strain ATCC

Query: 1 PMEGGQG 7
PM+GG G
Sbjct: 169 PMQGGTG 175


>sp|ASSY_HALMA|ARGININOSUCCINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PMEGGQG 7
P+EGG G
Sbjct: 164 PVEGGDG 170




19|SequenceR|100|91|VAAEGPMEGG

>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 2 AAEGPMEG 9
AAEGPM G
Sbjct: 79 AAEGPMYG 86


>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 AAEGPMEGG 10
A +GP+ GG
Sbjct: 212 ALKGPLHGG 220


>sp|TSGBD_HALVD|GLUCOSE ABC transporter permease protein|Haloferax volcanii (strain ATCC

Query: 4 EGPMEGG 10
GPM+GG
Sbjct: 167 RGPMQGG 173


>sp|GATA_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Halobacterium salinarum (strain ATCC

Query: 2 AAEGPMEG 9
AA+GP++G
Sbjct: 15 AADGPLDG 22


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 4 EGPMEGG 10
E P+EGG
Sbjct: 415 ESPIEGG 421


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 1 VAAEGPMEGG 10
+AA+ P+ GG
Sbjct: 78 IAAKSPLTGG 87


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 AAEGPMEGG 10
A +GP+ GG
Sbjct: 217 ALKGPLHGG 225




20|SequenceR|105|96|EVSRRVAAEG

>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 EVSRRVAA 8
E+SRR+AA
Sbjct: 82 EMSRRIAA 89


>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EVSRRVAAEG 10
E+++RV EG
Sbjct: 350 EIAKRVGVEG 359




21|SequenceR|110|101|HKQLHEVSRR

>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 QLHEVSRR 10
+ HEV+RR
Sbjct: 781 EFHEVTRR 788


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 QLHEVSRR 10
+ HEV+RR
Sbjct: 805 EFHEVTRR 812


>sp|PELO_PYRNV|PROTEIN pelota homolog|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KQLHEVSRR 10
KQ+ E+SRR
Sbjct: 178 KQVDELSRR 186


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QLHEVSRR 10
+ HEV+RR
Sbjct: 657 EFHEVTRR 664


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 QLHEVSRR 10
+ HEV+RR
Sbjct: 931 EFHEVTRR 938


>sp|MDH_METTM|MALATE dehydrogenase|Methanothermobacter marburgensis (strain ATCC

Query: 2 KQLHEVSRR 10
K LH +SRR
Sbjct: 27 KTLHLISRR 35


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 3 QLHEVSRR 10
+LHEVS R
Sbjct: 191 ELHEVSAR 198


>sp|MV3K_PICTO|MEVALONATE-3-KINASE torridus (strain ATCC 700027

Query: 1 HKQLHEV 7
HK LH+V
Sbjct: 244 HKMLHDV 250




22|SequenceR|115|106|QGWLGHKQLH

>sp|GVPE1_HALSA|TRANSCRIPTIONAL activator GvpE1|Halobacterium salinarum (strain ATCC 700922

Query: 2 GWLGHKQLH 10
GWL + QLH
Sbjct: 65 GWLDNDQLH 73


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC

Query: 2 GWLGHKQLH 10
GW GH ++H
Sbjct: 18 GWPGHSRVH 26


>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 2 GWLGHKQLH 10
GW GH ++H
Sbjct: 18 GWPGHSRVH 26


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 3 WLGHK 7
WLGHK
Sbjct: 199 WLGHK 203


>sp|RNZ_PYRAE|RIBONUCLEASE Z|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QGWLGHKQL 9
+ WLGH+ L
Sbjct: 28 EDWLGHRVL 36


>sp|GVPE2_HALSA|TRANSCRIPTIONAL activator GvpE2|Halobacterium salinarum (strain ATCC 700922

Query: 1 QGWLGHKQLH 10
+ WL QLH
Sbjct: 67 EAWLDDAQLH 76


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 2 GWLGHK 7
GWL H+
Sbjct: 268 GWLAHR 273


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QGWLGHKQL 9
+ WLGH+ L
Sbjct: 28 EDWLGHRVL 36


>sp|RNZ_PYRNV|RIBONUCLEASE Z|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QGWLGHKQL 9
+ WLGH+ L
Sbjct: 28 EDWLGHRFL 36


>sp|RNZ_PYRCJ|RIBONUCLEASE Z|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 QGWLGHKQL 9
+ WLGH+ L
Sbjct: 28 EDWLGHRVL 36


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QGWLGHKQL 9
+ WLGH+ L
Sbjct: 28 EDWLGHRIL 36


>sp|GVPE_HALMT|TRANSCRIPTIONAL activator GvpE|Haloferax mediterranei (strain ATCC 33500

Query: 2 GWLGHKQLH 10
GWL LH
Sbjct: 65 GWLDESYLH 73


>sp|Y2172_ARCFU|UNCHARACTERIZED protein AF_2172|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QGWLGH 6
+GWL H
Sbjct: 66 KGWLAH 71


>sp|Y3510_METJA|UNCHARACTERIZED protein MJECL10|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QGWLGHKQLH 10
+GW G K ++
Sbjct: 76 RGWYGEKSIY 85


>sp|RS17_PYRHO|SMALL ribosomal subunit protein uS17|Pyrococcus horikoshii (strain ATCC

Query: 3 WLGHKQLH 10
W GH ++H
Sbjct: 26 WHGHLKIH 33


>sp|RS17_PYRAB|SMALL ribosomal subunit protein uS17|Pyrococcus abyssi (strain GE5 /

Query: 3 WLGHKQLH 10
W GH ++H
Sbjct: 23 WHGHLKIH 30


>sp|COFE_ARCFU|COENZYME F420:L-glutamate ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WLGHKQLH 10
W+G K L+
Sbjct: 176 WIGRKDLY 183


>sp|Y1571_ARCFU|UNCHARACTERIZED protein AF_1571|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QGWLGH 6
+GWL H
Sbjct: 97 KGWLAH 102




23|SequenceR|120|111|LPVAPQGWLG

>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LPVAPQGWLG 10
L + PQGW+G
Sbjct: 53 LRLDPQGWVG 62


>sp|RLME_NATPD|RIBOSOMAL RNA large subunit methyltransferase|Natronomonas pharaonis

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 43 LGAAPGGWL 51


>sp|RLME_METMA|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina mazei (strain

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 45 LGAAPGGWL 53


>sp|RLME_METBU|RIBOSOMAL RNA large subunit methyltransferase|Methanococcoides burtonii

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 45 LGAAPGGWL 53


>sp|RLME_METBF|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina barkeri

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 45 LGAAPGGWL 53


>sp|RLME_METAR|RIBOSOMAL RNA large subunit methyltransferase|Methanocella arvoryzae

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 45 LGAAPGGWL 53


>sp|RLME_METAC|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina acetivorans

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 45 LGAAPGGWL 53


>sp|RLME_HALWD|RIBOSOMAL RNA large subunit methyltransferase|Haloquadratum walsbyi (strain

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 43 LGAAPGGWL 51


>sp|RLME_HALSA|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 44 LGAAPGGWL 52


>sp|RLME_HALS3|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 44 LGAAPGGWL 52


>sp|RLME_HALLT|RIBOSOMAL RNA large subunit methyltransferase|Halorubrum lacusprofundi

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 43 LGAAPGGWL 51


>sp|RLME_METTP|RIBOSOMAL RNA large subunit methyltransferase|Methanothrix thermoacetophila

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 45 LGAAPGGWL 53


>sp|RLME_METVS|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus vannielii

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 53 LGCAPGGWL 61


>sp|RLME_METMP|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 53 LGCAPGGWL 61


>sp|RLME_METM7|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 53 LGCAPGGWL 61


>sp|RLME_METM6|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 53 LGCAPGGWL 61


>sp|RLME_METM5|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 53 LGCAPGGWL 61


>sp|RLME_META3|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus aeolicus

Query: 1 LPVAPQGWL 9
L AP GWL
Sbjct: 53 LGCAPGGWL 61


>sp|Y1488_METJA|UNCHARACTERIZED protein MJ1488|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VAPQGW 8
+AP+GW
Sbjct: 291 LAPEGW 296


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 1 LPVAPQGWL 9
LP+AP G L
Sbjct: 432 LPIAPGGGL 440


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PQGWLG 10
P GWLG
Sbjct: 279 PVGWLG 284


>sp|CSM5_METJA|CRISPR system Cms protein Csm5|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VAPQGWL 9
+AP GW+
Sbjct: 406 IAPLGWI 412


>sp|RLME_HALMA|RIBOSOMAL RNA large subunit methyltransferase|Haloarcula marismortui

Query: 1 LPVAPQGWL 9
L AP GW+
Sbjct: 43 LGAAPGGWM 51


>sp|AROD_AERPE|3-DEHYDROQUINATE dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VAPQGWL 9
+AP+GWL
Sbjct: 89 LAPEGWL 95


>sp|Y613_ARCFU|UNCHARACTERIZED protein AF_0613|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PVAPQGW 8
PVA GW
Sbjct: 95 PVARMGW 101


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 APQGW 8
AP+GW
Sbjct: 499 APEGW 503


>sp|MALF_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 1 LPVAPQGWLG 10
L V+P WLG
Sbjct: 147 LGVSPVNWLG 156


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 1 LPVAPQGWLG 10
LPV+ + W G
Sbjct: 151 LPVSARDWAG 160


>sp|MTTB2_METMA|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LPVAPQGWLG 10
LPV+ + W G
Sbjct: 151 LPVSARDWAG 160




24|SequenceR|125|116|LEVDPLPVAP

>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 1 LEVDPLPVA 9
+EVDP PVA
Sbjct: 484 VEVDPTPVA 492


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 LEVDPLPVAP 10
LE+ P P+ P
Sbjct: 302 LEIPPYPIIP 311


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 VDPLPVAP 10
V+P PV P
Sbjct: 78 VEPYPVVP 85


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 1 LEVDPLPVAP 10
+EV LP+AP
Sbjct: 427 MEVKELPIAP 436


>sp|SUCC2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 1 LEVDPLPVAP 10
+E++PL V P
Sbjct: 188 VEINPLVVTP 197


>sp|SODM2_HALVD|SUPEROXIDE dismutase [Mn] 2|Haloferax volcanii (strain ATCC 29605

Query: 2 EVDPLP 7
E+DPLP
Sbjct: 4 ELDPLP 9


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 2 EVDPLPV 8
E+DP P+
Sbjct: 363 EIDPTPI 369


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 2 EVDPLPVA 9
E+D LP+A
Sbjct: 123 EIDKLPIA 130


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 1 LEVDPLPV 8
LE+DPL +
Sbjct: 129 LEIDPLTI 136


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EVDPLPV 8
E+DP P+
Sbjct: 363 EIDPTPI 369


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 2 EVDPLPV 8
E+DP P+
Sbjct: 363 EIDPTPI 369


>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LEVDPLPV 8
+EV+P+PV
Sbjct: 252 MEVNPVPV 259


>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 4 DPLPVA 9
DPLPVA
Sbjct: 340 DPLPVA 345




25|SequenceR|130|121|LPPLRLEVDP

>sp|Y584_METS5|UPF0282 protein Msed_0584|Metallosphaera sedula (strain ATCC 51363

Query: 1 LPPLRLEVD 9
LPP R+EVD
Sbjct: 42 LPPHRIEVD 50


>sp|XACG_HALVD|XYLOSE/ARABINOSE-BINDING protein XacG|Haloferax volcanii (strain ATCC 29605

Query: 3 PLRLEVDP 10
PLR ++DP
Sbjct: 387 PLRTDIDP 394


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PLRLEVDP 10
PLR+EV P
Sbjct: 335 PLRIEVGP 342


>sp|Y504_ARCFU|UPF0282 protein AF_0504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPPLRLEVD 9
LPP R+E++
Sbjct: 42 LPPHRIEIE 50


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PLRLEVDP 10
PLRLE+ P
Sbjct: 348 PLRLEIGP 355


>sp|SYP_CALMQ|PROLINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PLRLEVDP 10
P+RLEV P
Sbjct: 346 PIRLEVGP 353


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PLRLEVDP 10
P+RLE+ P
Sbjct: 348 PIRLEIGP 355


>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PLRLEVDP 10
PLR+EV P
Sbjct: 334 PLRIEVGP 341


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 LPPLRLEV 8
+PP R+EV
Sbjct: 137 MPPKRIEV 144


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 LPPLRLEV 8
+PP R+EV
Sbjct: 143 MPPKRIEV 150


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PLRLEVDP 10
PLRLE+ P
Sbjct: 348 PLRLEIGP 355


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 PLRLEVDP 10
P+RLE+ P
Sbjct: 348 PIRLEIGP 355


>sp|NADA_METKA|QUINOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 PLRLEVDP 10
PLR+E+DP
Sbjct: 267 PLRVELDP 274


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 PLRLEVDP 10
P+RLE+ P
Sbjct: 348 PIRLEIGP 355


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 PLRLEVDP 10
P+RLE+ P
Sbjct: 348 PIRLEIGP 355


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 PLRLEVDP 10
P+RLE+ P
Sbjct: 348 PIRLEIGP 355


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 PLRLEVDP 10
P+RLE+ P
Sbjct: 348 PIRLEIGP 355


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 PLRLEVDP 10
P+RLE+ P
Sbjct: 348 PIRLEIGP 355


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LPPLRLEVD 9
LPP +LEVD
Sbjct: 42 LPPHQLEVD 50


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PLRLEVDP 10
PLRLE+ P
Sbjct: 348 PLRLEIGP 355


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PLRLEVDP 10
PLR+EV P
Sbjct: 344 PLRIEVGP 351


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PLRLEVDP 10
PLRLE+ P
Sbjct: 345 PLRLEIGP 352


>sp|SRP54_METVS|SIGNAL recognition particle 54 kDa|Methanococcus vannielii (strain ATCC

Query: 3 PLRLEVDP 10
P +LE+DP
Sbjct: 90 PQKLELDP 97


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LPPLRLEVD 9
LPP ++EVD
Sbjct: 42 LPPHQIEVD 50


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 LPPLRLE 7
LPP RLE
Sbjct: 776 LPPRRLE 782


>sp|PGP_HALLT|PHOSPHOGLYCOLATE phosphatase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LPPLRLEVD 9
+PPL L++D
Sbjct: 2 VPPLALDID 10


>sp|Y488_METKA|PROTEIN MK0488|Methanopyrus kandleri (strain AV19 /

Query: 2 PPLRLEVD 9
PP +LEVD
Sbjct: 110 PPKKLEVD 117


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PLRLEVDP 10
P+R+EV P
Sbjct: 343 PVRIEVGP 350


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 PLRLEVDP 10
P+R+EV P
Sbjct: 343 PVRIEVGP 350




26|SequenceR|135|126|LNDGYLPPLR

>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LNDGYLPPLR 10
L GY+PP++
Sbjct: 355 LRSGYIPPVK 364


>sp|CBIM_ARCFU|PUTATIVE cobalt transport protein CbiM|Archaeoglobus fulgidus (strain ATCC

Query: 3 DGYLPP 8
+GYLPP
Sbjct: 5 EGYLPP 10


>sp|CBIM_METST|PUTATIVE cobalt transport protein CbiM|Methanosphaera stadtmanae (strain

Query: 3 DGYLPPL 9
+G+LPPL
Sbjct: 5 EGFLPPL 11


>sp|CBIM_METJA|PUTATIVE cobalt transport protein CbiM|Methanocaldococcus jannaschii

Query: 3 DGYLPPL 9
+GYLPP+
Sbjct: 5 EGYLPPM 11


>sp|PSB_METLZ|PROTEASOME subunit beta|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 GYLPPLR 10
GYLPP +
Sbjct: 206 GYLPPAK 212


>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 4 GYLPPLR 10
G+LPP R
Sbjct: 188 GFLPPWR 194


>sp|RS13_METAR|SMALL ribosomal subunit protein uS13|Methanocella arvoryzae (strain DSM

Query: 4 GYLPP 8
GYLPP
Sbjct: 117 GYLPP 121


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 3 DGYLPPL 9
DGY+PP
Sbjct: 96 DGYIPPF 102


>sp|AROE_NITMS|SHIKIMATE dehydrogenase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 3 DGYLPPLR 10
DG+L PL+
Sbjct: 104 DGFLEPLK 111


>sp|RNH2_CALMQ|RIBONUCLEASE HII|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LNDGYLPPL 9
+N+G LPP+
Sbjct: 184 INNGTLPPI 192


>sp|RFCL_METJA|REPLICATION factor C large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NDGYLPPLR 10
ND Y P +R
Sbjct: 137 NDAYAPSIR 145


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 DGYLPPLR 10
D Y+PP++
Sbjct: 275 DFYMPPMK 282


>sp|Y1066_METJA|UNCHARACTERIZED protein MJ1066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNDGYLPPLR 10
+ + +LPP R
Sbjct: 2 IRESFLPPFR 11


>sp|KDGA_PICTO|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Picrophilus torridus (strain ATCC 700027

Query: 1 LNDGYLPPL 9
+N GY PP+
Sbjct: 251 INGGYRPPM 259


>sp|ARGB_METJA|ACETYLGLUTAMATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNDGYLP 7
+N+GY+P
Sbjct: 173 INNGYIP 179


>sp|LYSK_PYRHO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus horikoshii

Query: 4 GYLPPL 9
GY+PPL
Sbjct: 224 GYVPPL 229


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 3 DGYLPP 8
+GY+PP
Sbjct: 87 EGYVPP 92


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 3 DGYLPPL 9
+GY+PP
Sbjct: 88 EGYVPPF 94


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LNDGYLPP 8
++ GYLPP
Sbjct: 308 VDAGYLPP 315


>sp|Y1309_STAMF|PROTEIN Smar_1309|Staphylothermus marinus (strain ATCC 43588

Query: 1 LNDGYLPPLR 10
ND PPLR
Sbjct: 95 FNDPRFPPLR 104


>sp|PSB1_METS5|PROTEASOME subunit beta 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 LNDGYLPPL 9
L DGY P L
Sbjct: 159 LEDGYSPDL 167


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain

Query: 3 DGYLPPL 9
+GY+PP
Sbjct: 88 EGYVPPF 94


>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 1 LNDGYLPP 8
L G+LPP
Sbjct: 154 LGSGFLPP 161


>sp|DGGGP_THESM|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus sibiricus (strain DSM 12597

Query: 4 GYLPPLR 10
G+LPP++
Sbjct: 31 GHLPPIK 37


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 4 GYLPPLR 10
GY PP++
Sbjct: 208 GYAPPMK 214


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNDGYLPPLR 10
NDGY P++
Sbjct: 337 FNDGYSIPVK 346




27|SequenceR|140|131|RFHQDLNDGY

>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 1 RFHQDLNDGY 10
R+H L DGY
Sbjct: 255 RYHGGLIDGY 264


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FHQDLNDG 9
FHQ ++DG
Sbjct: 400 FHQAISDG 407


>sp|RPE_METJA|RIBULOSE-PHOSPHATE 3-epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FHQDLNDGY 10
FH D+ DG+
Sbjct: 31 FHVDMMDGH 39


>sp|Y758_ARCFU|UNCHARACTERIZED protein AF_0758|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 QDLNDGY 10
QD ND Y
Sbjct: 233 QDFNDAY 239


>sp|CCA_METBF|CCA-ADDING enzyme|Methanosarcina barkeri (strain Fusaro /

Query: 1 RFHQDLNDGY 10
+ HQ +N+G+
Sbjct: 421 QVHQSVNEGF 430


>sp|TRPD_SULTO|ANTHRANILATE phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 QDLNDGY 10
+DL DGY
Sbjct: 304 KDLKDGY 310


>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 3 HQDLNDG 9
H+DL+DG
Sbjct: 73 HRDLDDG 79


>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 1 RFHQDLND 8
R+H LND
Sbjct: 199 RYHDALND 206


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 HQDLNDGY 10
H D +DGY
Sbjct: 75 HSDRHDGY 82




28|SequenceR|145|136|KQALLRFHQD

>sp|PCNA_THEAC|DNA polymerase sliding clamp|Thermoplasma acidophilum (strain ATCC

Query: 1 KQALLRFHQD 10
K+A + FH D
Sbjct: 53 KEAFVEFHTD 62


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KQALLRFH 8
K A+LR+H
Sbjct: 64 KDAILRYH 71




29|SequenceR|150|141|YPLSQKQALL

>sp|RS7_NATPD|SMALL ribosomal subunit protein uS7|Natronomonas pharaonis (strain ATCC

Query: 1 YPLSQKQ 7
YP+SQK+
Sbjct: 187 YPVSQKE 193




30|SequenceR|155|146|NAAELYPLSQ

>sp|THIE_METHJ|THIAMINE-PHOSPHATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NAAELYPLSQ 10
NAAELY ++Q
Sbjct: 42 NAAELYAIAQ 51


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 AELYPLSQ 10
AE+YPLSQ
Sbjct: 437 AEIYPLSQ 444


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 AELYPLSQ 10
AE YPLSQ
Sbjct: 676 AEKYPLSQ 683


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 ELYPLSQ 10
E+YPLSQ
Sbjct: 444 EIYPLSQ 450


>sp|MTRC_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanocaldococcus jannaschii

Query: 1 NAAELYPLSQ 10
+AAELYP Q
Sbjct: 8 HAAELYPEEQ 17


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 4 ELYPLS 9
ELYPLS
Sbjct: 255 ELYPLS 260


>sp|MTRC_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus vannielii (strain

Query: 1 NAAELYPLSQ 10
+AAEL+P +Q
Sbjct: 8 HAAELFPENQ 17


>sp|MTRC_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain

Query: 1 NAAELYPLSQ 10
+AAEL+P Q
Sbjct: 8 HAAELFPEDQ 17


>sp|MTRC_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain

Query: 1 NAAELYPLSQ 10
+AAEL+P Q
Sbjct: 8 HAAELFPEDQ 17


>sp|MTRC_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain

Query: 1 NAAELYPLSQ 10
+AAEL+P Q
Sbjct: 8 HAAELFPEDQ 17


>sp|Y692_ARCFU|UNCHARACTERIZED protein AF_0692|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NAAELYPLSQ 10
NAA+ +PL Q
Sbjct: 132 NAAKQFPLMQ 141


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NAAELYPLSQ 10
N +YPLSQ
Sbjct: 436 NIDTMYPLSQ 445




31|SequenceR|160|151|AQLLLNAAEL

>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 AQLLLNAAE 9
A+ LLNAAE
Sbjct: 655 AEWLLNAAE 663


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 AQLLLNAAE 9
A+ LLNAAE
Sbjct: 655 AEWLLNAAE 663




32|SequenceR|165|156|KPPLQAQLLL

>sp|RL11_HYPBU|LARGE ribosomal subunit protein uL11|Hyperthermus butylicus (strain DSM

Query: 1 KPPLQAQLLL 10
KPP +LLL
Sbjct: 69 KPPTTTELLL 78


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PPLQAQLL 9
PPLQ+Q +
Sbjct: 146 PPLQSQTI 153




33|SequenceR|170|161|AWAPPKPPLQ

>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AWAPPKP 7
AW+PP+P
Sbjct: 299 AWSPPQP 305


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 AWAPPKPPL 9
A APP+PP+
Sbjct: 367 AKAPPRPPV 375


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 2 WAPPKPPL 9
+ PP PP+
Sbjct: 57 YGPPNPPI 64


>sp|RTCA_ARCFU|RNA 3'-terminal phosphate cyclase|Archaeoglobus fulgidus (strain ATCC

Query: 1 AWAPP 5
AWAPP
Sbjct: 124 AWAPP 128


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 AWAPPKP 7
+W PP+P
Sbjct: 522 SWRPPEP 528


>sp|ENO_HALWD|ENOLASE walsbyi (strain DSM 16790

Query: 1 AWAPP 5
AWAPP
Sbjct: 198 AWAPP 202


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 1 AWAPP 5
AWAPP
Sbjct: 197 AWAPP 201


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AWAPP 5
AWAPP
Sbjct: 195 AWAPP 199


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 AWAPPK 6
AW PPK
Sbjct: 299 AWQPPK 304


>sp|DAPA_METKA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 AWAPPKPPLQ 10
A +PP+PPL+
Sbjct: 267 ASSPPRPPLK 276


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 AWAPPKP 7
AWAPP P
Sbjct: 528 AWAPPPP 534


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WAPPKP 7
W+PP+P
Sbjct: 528 WSPPEP 533


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 2 WAPPKP 7
W PP+P
Sbjct: 528 WTPPEP 533


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 1 AWAPP 5
AWAPP
Sbjct: 125 AWAPP 129


>sp|RTCA_PYRAE|RNA 3'-terminal phosphate cyclase|Pyrobaculum aerophilum (strain ATCC

Query: 1 AWAPP 5
AWAPP
Sbjct: 125 AWAPP 129


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 3 APPKPPL 9
APPKP L
Sbjct: 149 APPKPEL 155


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 AWAPP 5
AWAPP
Sbjct: 18 AWAPP 22


>sp|RTCA_PYRCJ|RNA 3'-terminal phosphate cyclase|Pyrobaculum calidifontis (strain DSM

Query: 1 AWAPP 5
AWAPP
Sbjct: 124 AWAPP 128


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 WAPPKP 7
W+PP P
Sbjct: 527 WSPPSP 532


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 WAPPKP 7
W+PP P
Sbjct: 527 WSPPSP 532


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 WAPPKP 7
W+PP P
Sbjct: 527 WSPPSP 532


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WAPPKP 7
W+PP P
Sbjct: 527 WSPPSP 532


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 WAPPKP 7
W+PP P
Sbjct: 527 WSPPSP 532


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 WAPPKP 7
W+PP P
Sbjct: 527 WSPPSP 532


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 WAPPKP 7
W+PP P
Sbjct: 527 WSPPSP 532


>sp|DPHB_METKA|DIPHTHINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 WAPPKPP 8
W P +PP
Sbjct: 226 WEPGEPP 232


>sp|AGLS_HALVD|DOLICHOL phosphate-mannose mannosyltransferase|Haloferax volcanii (strain

Query: 1 AWAPPKPPL 9
AW PKPPL
Sbjct: 64 AW-DPKPPL 71


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 4 PPKPPLQ 10
PPK PL+
Sbjct: 446 PPKEPLK 452


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AWAPPKP 7
+W PP+P
Sbjct: 518 SWRPPEP 524


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 4 PPKPPLQ 10
PPK PL+
Sbjct: 446 PPKEPLK 452


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 2 WAPPKP 7
W PPKP
Sbjct: 519 WQPPKP 524


>sp|RFRNP_AERPE|RNA-FREE ribonuclease P|Aeropyrum pernix (strain ATCC 700893

Query: 1 AWAPPKPP 8
AW KPP
Sbjct: 84 AWVRVKPP 91


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 2 WAPPKPPLQ 10
W+PP P Q
Sbjct: 525 WSPPPLPKQ 533


>sp|RTCA_PYRNV|RNA 3'-terminal phosphate cyclase|Pyrobaculum neutrophilum (strain DSM

Query: 1 AWAPP 5
AWAPP
Sbjct: 125 AWAPP 129


>sp|CBIA_HALSA|COBYRINATE a,c-diamide synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AWAPPKPP 8
A PP+PP
Sbjct: 225 ARTPPRPP 232


>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 APPKPPLQ 10
+PP+PPL
Sbjct: 3 SPPEPPLH 10


>sp|TRMY_THEGJ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 2 WAPPKPP 8
+ PP+PP
Sbjct: 57 YGPPEPP 63


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WAPPKP 7
W PP P
Sbjct: 530 WTPPPP 535


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 1 AWAPPKPPLQ 10
AWA P P L+
Sbjct: 105 AWAQPPPELE 114


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WAPPKP 7
W+PP P
Sbjct: 529 WSPPPP 534


>sp|TRMY_THEON|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 2 WAPPKPP 8
+ PP PP
Sbjct: 57 YGPPNPP 63


>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 1 AWAPP 5
AW+PP
Sbjct: 124 AWSPP 128




34|SequenceR|175|166|WGEAWAWAPP

>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GEAWAWAPP 10
G+ AWAPP
Sbjct: 191 GDEGAWAPP 199


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 WGEAWAWAPP 10
+G AW PP
Sbjct: 294 YGRGMAWQPP 303


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 2 GEAWAWAPP 10
GEAWA PP
Sbjct: 103 GEAWAQPPP 111


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WGEAWAWAPP 10
+G AW+PP
Sbjct: 294 FGREMAWSPP 303


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 2 GEAWAWAPP 10
G AWAPP
Sbjct: 121 GTDVAWAPP 129


>sp|RTCA_PYRAE|RNA 3'-terminal phosphate cyclase|Pyrobaculum aerophilum (strain ATCC

Query: 2 GEAWAWAPP 10
G AWAPP
Sbjct: 121 GTDVAWAPP 129


>sp|RTCA_ARCFU|RNA 3'-terminal phosphate cyclase|Archaeoglobus fulgidus (strain ATCC

Query: 2 GEAWAWAPP 10
G AWAPP
Sbjct: 120 GTDVAWAPP 128


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WGEAWAW 7
WGE W W
Sbjct: 322 WGEYWKW 328


>sp|SECD_METJA|PROTEIN-EXPORT membrane protein SecD|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GEAWAWAPP 10
GE WA+ P
Sbjct: 135 GETWAYGVP 143


>sp|TRUA_ARCFU|TRNA pseudouridine synthase A|Archaeoglobus fulgidus (strain ATCC

Query: 4 AWAWA 8
AWAWA
Sbjct: 85 AWAWA 89


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WGEAWA 6
WGE W
Sbjct: 76 WGEGWG 81


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 1 WGEAW 5
WGE+W
Sbjct: 87 WGESW 91


>sp|RL3_PYRCJ|LARGE ribosomal subunit protein uL3|Pyrobaculum calidifontis (strain DSM

Query: 2 GEAWAWAPP 10
GEAW PP
Sbjct: 103 GEAWVSEPP 111


>sp|TRUA_METBU|TRNA pseudouridine synthase A|Methanococcoides burtonii (strain DSM

Query: 2 GEAWAWA 8
G WAWA
Sbjct: 86 GTIWAWA 92


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 2 GEAWAWAPP 10
G+ AWAPP
Sbjct: 193 GDEGAWAPP 201


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 6 AWAPP 10
AWAPP
Sbjct: 18 AWAPP 22


>sp|ENO_HALWD|ENOLASE walsbyi (strain DSM 16790

Query: 2 GEAWAWAPP 10
G+ AWAPP
Sbjct: 194 GDEGAWAPP 202


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WGEAW 5
WGEAW
Sbjct: 259 WGEAW 263


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 EAWAW 7
E WAW
Sbjct: 259 ERWAW 263


>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 2 GEAWAWAPP 10
G AW+PP
Sbjct: 120 GTDVAWSPP 128


>sp|RTCA_PYRCJ|RNA 3'-terminal phosphate cyclase|Pyrobaculum calidifontis (strain DSM

Query: 2 GEAWAWAPP 10
G AWAPP
Sbjct: 120 GTDVAWAPP 128


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 EAWAW 7
E WAW
Sbjct: 256 ERWAW 260




35|SequenceR|180|171|PGYRTWGEAW

>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 TWGEAW 10
TWGE W
Sbjct: 75 TWGEGW 80


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 4 RTWGEAW 10
RTW E W
Sbjct: 30 RTWAEKW 36


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 PGYRTWGEAW 10
PGY+ GEA+
Sbjct: 345 PGYQKVGEAY 354


>sp|PSTB_AERPE|PHOSPHATE import ATP-binding protein PstB|Aeropyrum pernix (strain ATCC

Query: 1 PGYRTWGEAW 10
PG R GE W
Sbjct: 59 PGARVEGEVW 68


>sp|Y1989_PYRHO|UPF0104 membrane protein PH1989|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGYRTWGEA 9
PG RT GEA
Sbjct: 87 PGARTGGEA 95


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 2 GYRTWGEAW 10
GYR GE W
Sbjct: 319 GYRASGENW 327


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 YRTWGEAW 10
+R W E W
Sbjct: 34 FRAWAEEW 41


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 RTWGEA 9
R+WGEA
Sbjct: 999 RSWGEA 1004


>sp|GCH3_PYRIL|GTP cyclohydrolase III|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GYRTWGEA 9
GYR W E+
Sbjct: 11 GYREWTES 18


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 1 PGYRTWGE 8
PG+R +GE
Sbjct: 35 PGHRVYGE 42


>sp|PSB1_THEKO|PROTEASOME subunit beta 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GYRTWGE 8
GYR W E
Sbjct: 189 GYREWSE 195


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GYRTWGEAW 10
GY WG W
Sbjct: 304 GYSGWGYRW 312


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 4 RTWGEAW 10
R W EAW
Sbjct: 29 RAWVEAW 35


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GYRTWGEAW 10
GY WG W
Sbjct: 310 GYSGWGYRW 318


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 1 PGYRTWG 7
PG R WG
Sbjct: 146 PGKRDWG 152


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PGYRTWGEA 9
PG R W +A
Sbjct: 358 PGARDWDDA 366


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PGYRTWGEA 9
PG R W +A
Sbjct: 358 PGARDWDDA 366


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PGYRTWGEA 9
PGY GEA
Sbjct: 389 PGYDNHGEA 397


>sp|GCH3_AERPE|GTP cyclohydrolase III|Aeropyrum pernix (strain ATCC 700893

Query: 2 GYRTWGE 8
GYR W E
Sbjct: 16 GYREWTE 22


>sp|PDXT_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Hyperthermus butylicus (strain

Query: 5 TWGEA 9
TWGEA
Sbjct: 147 TWGEA 151


>sp|TRUD_THEVO|PROBABLE tRNA pseudouridine synthase D|Thermoplasma volcanium (strain ATCC

Query: 2 GYRTW 6
GY+TW
Sbjct: 318 GYKTW 322


>sp|RL4_METKA|LARGE ribosomal subunit protein uL4|Methanopyrus kandleri (strain AV19

Query: 2 GYRTWGEAW 10
G+RT E+W
Sbjct: 53 GFRTSAESW 61


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 2 GYRTWGEAW 10
G+R GE W
Sbjct: 320 GFRAGGENW 328


>sp|RL30_METST|LARGE ribosomal subunit protein uL30|Methanosphaera stadtmanae (strain

Query: 3 YRTWGE 8
Y TWGE
Sbjct: 51 YITWGE 56


>sp|FLPA_THEGJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus gammatolerans

Query: 1 PGYRTWGE 8
PG R +GE
Sbjct: 30 PGQRVYGE 37


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PGYRTWGE 8
P YR W E
Sbjct: 269 PEYRDWEE 276


>sp|FLPA_THEKO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus kodakarensis

Query: 1 PGYRTWGE 8
PG R +GE
Sbjct: 30 PGQRVYGE 37


>sp|FLPA_AERPE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 1 PGYRTWGE 8
PG R +GE
Sbjct: 35 PGQRVYGE 42


>sp|PTH_PYRFU|PEPTIDYL-TRNA hydrolase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 RTWGEAW 10
R W EAW
Sbjct: 42 REWFEAW 48


>sp|PTH_PYRHO|PEPTIDYL-TRNA hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 RTWGEAW 10
R W EAW
Sbjct: 44 REWFEAW 50


>sp|THII_METMA|PROBABLE tRNA sulfurtransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGYRTWGE 8
PG R W E
Sbjct: 33 PGVRNWYE 40


>sp|ILVC_IGNAA|KETOL-ACID reductoisomerase (NAD(P)(+))|Ignisphaera aggregans (strain DSM

Query: 2 GYRTWGEAW 10
GY + G AW
Sbjct: 24 GYGSQGRAW 32


>sp|ILVC_SULAC|KETOL-ACID reductoisomerase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GYRTWGEAW 10
GY + G AW
Sbjct: 24 GYGSQGRAW 32


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 PGYRTWGE 8
PGY +W E
Sbjct: 43 PGYLSWFE 50


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 PGYRTWGE 8
PGY +W E
Sbjct: 43 PGYLSWFE 50


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 YRTWGEA 9
YR+W EA
Sbjct: 860 YRSWVEA 866


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 2 GYRTWGEAW 10
G TW AW
Sbjct: 50 GRETWKYAW 58


>sp|FLPA_PYRAB|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 PGYRTWGE 8
PG R +GE
Sbjct: 31 PGQRVYGE 38


>sp|PDXT_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfurisphaera tokodaii (strain

Query: 4 RTWGEA 9
+TWG+A
Sbjct: 152 KTWGDA 157


>sp|LIVM_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 3 YRTWGEAW 10
YR W AW
Sbjct: 163 YRGWVFAW 170


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 RTWGEAW 10
R W E W
Sbjct: 35 RKWAEEW 41


>sp|ILVC_SULTO|KETOL-ACID reductoisomerase (NADP(+))|Sulfurisphaera tokodaii (strain DSM

Query: 2 GYRTWGEAW 10
GY + G AW
Sbjct: 24 GYGSQGRAW 32


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 WGEAW 10
WG+ W
Sbjct: 580 WGDTW 584


>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain

Query: 2 GYRTWGEAW 10
GY + G AW
Sbjct: 27 GYGSQGRAW 35


>sp|ILVC_SACI7|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 GYRTWGEAW 10
GY + G AW
Sbjct: 27 GYGSQGRAW 35


>sp|ILVC_SACI6|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 GYRTWGEAW 10
GY + G AW
Sbjct: 27 GYGSQGRAW 35


>sp|ILVC_SACI4|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 GYRTWGEAW 10
GY + G AW
Sbjct: 27 GYGSQGRAW 35


>sp|ILVC_SACI3|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 GYRTWGEAW 10
GY + G AW
Sbjct: 27 GYGSQGRAW 35


>sp|ILVC_SACI2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 GYRTWGEAW 10
GY + G AW
Sbjct: 27 GYGSQGRAW 35


>sp|ILVC_SACI1|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 2 GYRTWGEAW 10
GY + G AW
Sbjct: 27 GYGSQGRAW 35


>sp|FLPA_PYRHO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 PGYRTWGE 8
PG R +GE
Sbjct: 31 PGQRVYGE 38


>sp|FLPA_PYRFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 1 PGYRTWGE 8
PG R +GE
Sbjct: 31 PGQRVYGE 38


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 TWGEAW 10
T+GE+W
Sbjct: 2743 TYGESW 2748


>sp|RL3_METKA|LARGE ribosomal subunit protein uL3|Methanopyrus kandleri (strain AV19 /

Query: 2 GYRTWGEAW 10
GYR EAW
Sbjct: 98 GYRCVTEAW 106


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 WGEAW 10
WGEAW
Sbjct: 259 WGEAW 263


>sp|ARADH_SACS2|D-ARABINOSE 1-dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 3 YRTWGE 8
Y TWG+
Sbjct: 94 YATWGD 99


>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 6 WGEAW 10
WG+ W
Sbjct: 283 WGQVW 287


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PGYRTWGEA 9
PG R W +A
Sbjct: 358 PGARDWDDA 366




36|SequenceR|185|176|VAEGEPGYRT

>sp|RS6E_PYRAR|SMALL ribosomal subunit protein eS6|Pyrobaculum arsenaticum (strain DSM

Query: 1 VAEGEPGYR 9
+AEG PGYR
Sbjct: 81 LAEGPPGYR 89


>sp|RS6E_PYRCJ|SMALL ribosomal subunit protein eS6|Pyrobaculum calidifontis (strain

Query: 1 VAEGEPGYR 9
+A+G PGYR
Sbjct: 81 LADGPPGYR 89


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VAEGEPGY 8
V EG PG+
Sbjct: 196 VGEGRPGW 203


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 1 VAEGEPGYR 9
+ GEP YR
Sbjct: 200 ITPGEPSYR 208


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 4 GEPGYR 9
GEP YR
Sbjct: 206 GEPSYR 211


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 3 EGEPGY 8
EGEP Y
Sbjct: 316 EGEPAY 321


>sp|TDXH2_THEAC|PEROXIREDOXIN 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 EGEPGYRT 10
+GEPG +T
Sbjct: 185 DGEPGVKT 192


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 4 GEPGYR 9
G PGYR
Sbjct: 19 GSPGYR 24


>sp|RL32_NANEQ|LARGE ribosomal subunit protein eL32|Nanoarchaeum equitans (strain

Query: 5 EPGYRT 10
EPGYR+
Sbjct: 68 EPGYRS 73


>sp|RL5_SULAC|LARGE ribosomal subunit protein uL5|Sulfolobus acidocaldarius (strain

Query: 6 PGYRT 10
PGYRT
Sbjct: 138 PGYRT 142


>sp|RS6E_PYRIL|SMALL ribosomal subunit protein eS6|Pyrobaculum islandicum (strain DSM

Query: 1 VAEGEPGY 8
+A+G PGY
Sbjct: 81 LADGPPGY 88


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 3 EGEPGYR 9
EG P YR
Sbjct: 118 EGNPAYR 124


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 AEGEPGYR 9
AEG+PG R
Sbjct: 51 AEGKPGER 58


>sp|DUT_METTH|PROBABLE deoxyuridine 5'-triphosphate

Query: 2 AEGEPGYR 9
A G+PG+R
Sbjct: 100 AVGDPGFR 107


>sp|Y1463_METJA|UPF0128 protein MJ1463|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EGEPGYR 9
+GEP YR
Sbjct: 197 DGEPRYR 203


>sp|IDI2_SULTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 EGEPGY 8
EGEP Y
Sbjct: 166 EGEPNY 171


>sp|Y1212_ARCFU|UNCHARACTERIZED protein AF_1212|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VAEGEPGYRT 10
+ EG YRT
Sbjct: 109 IVEGSQNYRT 118


>sp|RL30_THEPD|LARGE ribosomal subunit protein uL30|Thermofilum pendens (strain DSM 2475

Query: 2 AEGEPGYR 9
A GE GYR
Sbjct: 137 ARGELGYR 144




37|SequenceR|190|181|PIAVPVAEGE

>sp|GLKA_THESM|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PIAVPVAEGE 10
PI VP+ EG+
Sbjct: 156 PIYVPIFEGK 165


>sp|GLKA_THELN|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus litoralis (strain ATCC

Query: 1 PIAVPVAEG 9
PI VPV EG
Sbjct: 156 PIYVPVFEG 164


>sp|PURQ_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C7 /

Query: 2 IAVPVAEGE 10
I VP+A GE
Sbjct: 155 IHVPIAHGE 163


>sp|TFS_ARCFU|TRANSCRIPTION factor S|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VPVAEGE 10
VPV EGE
Sbjct: 46 VPVIEGE 52


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 IAVPVAEG 9
IAVP AEG
Sbjct: 355 IAVPRAEG 362


>sp|RLME_HALSA|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 2 IAVPVAEGE 10
I P+AEG+
Sbjct: 196 IVAPIAEGD 204


>sp|RLME_HALS3|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 2 IAVPVAEGE 10
I P+AEG+
Sbjct: 196 IVAPIAEGD 204


>sp|AROC_METAR|CHORISMATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PIAVPVAE 8
P AVPVAE
Sbjct: 334 PRAVPVAE 341


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PIAVPVAE 8
P AVPVAE
Sbjct: 339 PRAVPVAE 346




38|SequenceR|195|186|LAREEPIAVP

>sp|SPEE_SULTO|POLYAMINE aminopropyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 REEPIAVP 10
RE P+AVP
Sbjct: 292 RENPVAVP 299


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 REEPIAVP 10
RE P+A P
Sbjct: 294 RENPVATP 301


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 LAREEPIAVP 10
LA +P+AVP
Sbjct: 983 LAVADPVAVP 992


>sp|KADA_METVO|ADENYLATE kinase|Methanococcus voltae

Query: 1 LAREEPIAV 9
+A+E P+AV
Sbjct: 81 MAKESPVAV 89


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 1 LAREEPIAVP 10
L+ E+P+ VP
Sbjct: 578 LSEEKPVGVP 587


>sp|KADA_METMP|ADENYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LAREEPIAV 9
+A+E P+AV
Sbjct: 81 MAKESPVAV 89


>sp|KADA_METM6|ADENYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 LAREEPIAV 9
+A+E P+AV
Sbjct: 81 MAKESPVAV 89


>sp|KADA_METM5|ADENYLATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 LAREEPIAV 9
+A+E P+AV
Sbjct: 81 MAKESPVAV 89




39|SequenceR|200|191|EVDFVLAREE

>sp|PYRB_METAR|ASPARTATE carbamoyltransferase catalytic subunit|Methanocella arvoryzae

Query: 1 EVDFVLAR 8
E+DF+L R
Sbjct: 18 EIDFILDR 25


>sp|DHAS_ARCFU|ASPARTATE-SEMIALDEHYDE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVDFVLARE 9
EVD++++RE
Sbjct: 47 EVDWIVSRE 55




40|SequenceR|205|196|EALCVEVDFV

>sp|SURE_HALWD|5'-NUCLEOTIDASE SurE|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EALCVEVDFV 10
EALC +VD V
Sbjct: 77 EALCPDVDLV 86


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 1 EALCVEVDFV 10
EA+C+E+D V
Sbjct: 417 EAVCIELDVV 426


>sp|SRP19_METJA|SIGNAL recognition particle 19 kDa|Methanocaldococcus jannaschii (strain

Query: 4 CVEVDF 9
CVEVD+
Sbjct: 63 CVEVDY 68


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EALCVEVDFV 10
E L +EVDF+
Sbjct: 116 EKLGIEVDFL 125


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain ATCC

Query: 2 ALCVEVDF 9
ALCV +D+
Sbjct: 302 ALCVSIDY 309


>sp|NNRE_CENSY|NAD(P)H-HYDRATE epimerase|Cenarchaeum symbiosum (strain A)

Query: 4 CVEVDF 9
CV+VDF
Sbjct: 171 CVKVDF 176


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ALCVEVDFV 10
ALC EV+ V
Sbjct: 84 ALCPEVEIV 92


>sp|PRIS_PYRCJ|DNA primase small subunit PriS|Pyrobaculum calidifontis (strain DSM

Query: 1 EALCVEVDFV 10
EAL VEVD V
Sbjct: 208 EALKVEVDEV 217


>sp|DEOC_PYRAR|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 LCVEVDF 9
LCV VDF
Sbjct: 53 LCVVVDF 59




41|SequenceR|210|201|TPCTGEALCV

>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PCTGE 6
PCTGE
Sbjct: 172 PCTGE 176


>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PCTGE 6
PCTGE
Sbjct: 172 PCTGE 176


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 2 PCTGE 6
PCTGE
Sbjct: 176 PCTGE 180


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PCTGE 6
PCTGE
Sbjct: 172 PCTGE 176


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 PCTGEALCV 10
PC A+C+
Sbjct: 391 PCVAAAMCL 399


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 PCTGEALCV 10
PC A+C+
Sbjct: 391 PCVAAAMCL 399


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 PCTGEALCV 10
P TGEAL V
Sbjct: 284 PVTGEALPV 292


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CTGEALC 9
CTG LC
Sbjct: 428 CTGRKLC 434


>sp|IF1A_SULTO|TRANSLATION initiation factor 1A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PCTGEALCV 10
P GE +CV
Sbjct: 18 PAEGEVICV 26


>sp|FEN_METMA|FLAP endonuclease 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PCTGEA 7
PC GEA
Sbjct: 150 PCEGEA 155


>sp|FEN_METBF|FLAP endonuclease 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 PCTGEA 7
PC GEA
Sbjct: 150 PCEGEA 155


>sp|FEN_METAC|FLAP endonuclease 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PCTGEA 7
PC GEA
Sbjct: 150 PCEGEA 155


>sp|IF1A_SULAC|TRANSLATION initiation factor 1A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PCTGEALCV 10
P GE +CV
Sbjct: 18 PIEGEVICV 26


>sp|RS8E_METKA|SMALL ribosomal subunit protein eS8|Methanopyrus kandleri (strain AV19

Query: 2 PCTGEALCV 10
P TGE CV
Sbjct: 68 PETGEVKCV 76


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 1 TPCTGEALC 9
+ C G ALC
Sbjct: 174 SACMGPALC 182


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 PCTGEALCV 10
P TG+ CV
Sbjct: 264 PLTGDEYCV 272


>sp|Y551_METJA|UNCHARACTERIZED protein MJ0551|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CTGEALC 9
CTGE C
Sbjct: 189 CTGEGKC 195




42|SequenceR|215|206|IAVALTPCTG

>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 IAVALTPCTG 10
IA+ LTP TG
Sbjct: 152 IAMFLTPATG 161


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 IAVALTPCTG 10
IA+ LTP TG
Sbjct: 152 IAMFLTPATG 161


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 2 AVALTPC 8
A A+TPC
Sbjct: 351 AAAITPC 357


>sp|Y1254_IGNH4|UPF0173 metal-dependent hydrolase Igni_1254|Ignicoccus hospitalis (strain

Query: 1 IAVALTPCT 9
+ +ALTP T
Sbjct: 109 LGIALTPAT 117




43|SequenceR|220|211|WASPSIAVAL

>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 WASPSIAVAL 10
WA PS+A+ L
Sbjct: 438 WALPSLAMVL 447


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 WASPSIAVAL 10
WA PS+A+ L
Sbjct: 438 WALPSLAMVL 447


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 WASPSIAVAL 10
WA PSI + L
Sbjct: 455 WALPSIMMVL 464


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 WASPSIAVAL 10
WA PS+ + L
Sbjct: 449 WAIPSLVMLL 458


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WASPSIAVAL 10
WA PS+ + L
Sbjct: 442 WALPSLLMVL 451




44|SequenceR|225|216|SCWSYWASPS

>sp|HAS8_HALS8|HALOCIN-S8 S8a

Query: 1 SCWSYWAS 8
SCW W S
Sbjct: 302 SCWDEWTS 309


>sp|UDGB_PYRAE|TYPE-5 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 WSYWASP 9
WSYW P
Sbjct: 45 WSYWGRP 51


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WSYWASP 9
W++W P
Sbjct: 387 WAWWGEP 393


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WSYWASPS 10
W Y+ SP+
Sbjct: 113 WRYFVSPN 120




45|SequenceR|230|221|EVLRQSCWSY

>sp|Y1384_THEVO|PROTEIN TV1384|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LRQSCWSY 10
L Q CW Y
Sbjct: 169 LWQGCWKY 176


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 1 EVLRQSC 7
EVLR SC
Sbjct: 97 EVLRHSC 103


>sp|PYRG_METLZ|CTP synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EVLRQSCWSY 10
E +RQ W Y
Sbjct: 161 EAVRQMHWEY 170


>sp|Y1584_METJA|UNCHARACTERIZED protein MJ1584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VLRQSC 7
VLRQSC
Sbjct: 99 VLRQSC 104


>sp|Y236_THEAC|PROTEIN Ta0236|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LRQSCWSY 10
L + CW Y
Sbjct: 174 LWEGCWKY 181




46|SequenceR|235|226|WSYREEVLRQ

>sp|THII_DESA1|TRNA sulfurtransferase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 WSYREEVLR 9
WSYR+ VLR
Sbjct: 252 WSYRQVVLR 260


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WSYREE 6
W YREE
Sbjct: 22 WGYREE 27


>sp|HUTI_PYRAR|IMIDAZOLONEPROPIONASE arsenaticum (strain DSM 13514

Query: 1 WSYREEV 7
W YR+EV
Sbjct: 17 WRYRDEV 23


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 YREEVLRQ 10
YR EVLR
Sbjct: 371 YRSEVLRH 378


>sp|RL10E_NANEQ|LARGE ribosomal subunit protein uL16|Nanoarchaeum equitans (strain

Query: 1 WSYREEVL 8
W YREE++
Sbjct: 169 WRYREEIV 176


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 SYREEVLRQ 10
+YREE++ Q
Sbjct: 345 TYREELIEQ 353


>sp|Y666_METKA|UPF0305 protein MK0666|Methanopyrus kandleri (strain AV19 /

Query: 2 SYREEVLR 9
SYRE++LR
Sbjct: 17 SYREKILR 24


>sp|GUAAA_IGNH4|GMP synthase [glutamine-hydrolyzing] subunit A|Ignicoccus hospitalis

Query: 2 SYREEVLRQ 10
S+ EEVLR+
Sbjct: 127 SHNEEVLRE 135


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 SYREEVLRQ 10
++REE+LR+
Sbjct: 10 AHREEMLRE 18


>sp|NDK_THEVO|NUCLEOSIDE diphosphate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WSYREEVL 8
W+Y +EV+
Sbjct: 139 WAYGDEVI 146


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WSYREEVL 8
W Y EE+L
Sbjct: 315 WDYLEEIL 322




47|SequenceR|240|231|SLQSTWSYRE

>sp|RS3_THEAC|SMALL ribosomal subunit protein uS3|Thermoplasma acidophilum (strain ATCC

Query: 1 SLQSTWSYRE 10
SL+ WSYR+
Sbjct: 101 SLEKGWSYRK 110


>sp|RS3_THEVO|SMALL ribosomal subunit protein uS3|Thermoplasma volcanium (strain ATCC

Query: 1 SLQSTWSYRE 10
SL+ WSYR+
Sbjct: 101 SLEKGWSYRK 110


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 QSTWSYRE 10
Q++WSYR+
Sbjct: 343 QNSWSYRD 350


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 QSTWSYRE 10
+ +WSYRE
Sbjct: 379 KRSWSYRE 386


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 QSTWSYRE 10
Q +WSYR+
Sbjct: 343 QHSWSYRD 350


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 QSTWSYRE 10
Q WSYR+
Sbjct: 343 QGNWSYRD 350


>sp|Y1055_METJA|UNCHARACTERIZED protein MJ1055|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SLQSTWSY 8
SLQ+ W+Y
Sbjct: 97 SLQNPWAY 104


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 QSTWSYRE 10
+ +WSYR+
Sbjct: 343 EGSWSYRD 350


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 QSTWSYRE 10
+ +WSYR+
Sbjct: 343 EGSWSYRD 350


>sp|TRM1_PYRNV|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum neutrophilum

Query: 1 SLQSTWSYR 9
S+++ W YR
Sbjct: 292 SIEAPWHYR 300


>sp|RS15_METTP|SMALL ribosomal subunit protein uS15|Methanothrix thermoacetophila

Query: 2 LQSTWSYR 9
L +TW YR
Sbjct: 151 LPATWEYR 158


>sp|METE_SULAC|METHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 STWSYRE 10
S WSY E
Sbjct: 140 SEWSYNE 146




48|SequenceR|245|236|ILDAPSLQST

>sp|Y3534_METJA|UNCHARACTERIZED protein MJECL34|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILDAPSLQ 8
++DAPSLQ
Sbjct: 45 VIDAPSLQ 52




49|SequenceR|250|241|PVELPILDAP

>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 VELPILDAP 10
VE+P LD P
Sbjct: 288 VEVPTLDRP 296


>sp|FEN_HALMA|FLAP endonuclease 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 VELPILDAP 10
+++PI+DAP
Sbjct: 144 LDVPIVDAP 152


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 3 ELPILDAP 10
+LP+LDAP
Sbjct: 177 DLPVLDAP 184


>sp|KPYK_METJA|PYRUVATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VELPILD 8
+ELPI+D
Sbjct: 147 IELPIID 153


>sp|FEN_METHJ|FLAP endonuclease 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 LPILDAP 10
LP++DAP
Sbjct: 145 LPVVDAP 151


>sp|RS3_METJA|SMALL ribosomal subunit protein uS3|Methanocaldococcus jannaschii

Query: 1 PVELPILDA 9
PVE P LDA
Sbjct: 83 PVENPDLDA 91


>sp|RS3_NANEQ|SMALL ribosomal subunit protein uS3|Nanoarchaeum equitans (strain

Query: 1 PVELPILDA 9
P+E P LDA
Sbjct: 83 PIENPNLDA 91


>sp|LEUD1_PYRFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VELPILDAP 10
+ LPIL+AP
Sbjct: 98 IGLPILEAP 106


>sp|LEUD1_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 2 VELPILDAP 10
+ LPIL+AP
Sbjct: 98 IGLPILEAP 106




50|SequenceR|255|246|SSAGTPVELP

>sp|Y079_PYRAB|UPF0215 protein PYRAB00790|Pyrococcus abyssi (strain GE5 /

Query: 2 SAGTPVEL 9
SAGTP+EL
Sbjct: 134 SAGTPIEL 141


>sp|Y259_METJA|UNCHARACTERIZED protein MJ0259|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GTPVELP 10
GTP+E+P
Sbjct: 41 GTPIEIP 47


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SSAGTPVELP 10
+S G PVE+P
Sbjct: 440 ASRGAPVEVP 449


>sp|ATGT_HALSA|TRNA-GUANINE(15) transglycosylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SSAGTPVELP 10
S GTPV++P
Sbjct: 121 SDIGTPVDIP 130


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SSAGTPVELP 10
S GTPV++P
Sbjct: 120 SDIGTPVDIP 129


>sp|ATGT_NATPD|TRNA-GUANINE(15) transglycosylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SSAGTPVELP 10
S GTPV++P
Sbjct: 121 SDIGTPVDIP 130


>sp|HIS6_METAR|IMIDAZOLE glycerol phosphate synthase subunit|Methanocella arvoryzae

Query: 2 SAGTPVEL 9
SAG PVEL
Sbjct: 32 SAGDPVEL 39


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 2 SAGTPVEL 9
+AGTPVE+
Sbjct: 148 TAGTPVEV 155


>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii (strain

Query: 3 AGTPVEL 9
AGTPV L
Sbjct: 99 AGTPVRL 105


>sp|HERA_SULAC|DNA double-strand break repair helicase|Sulfolobus acidocaldarius

Query: 3 AGTPVEL 9
AGTPV L
Sbjct: 100 AGTPVRL 106


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 2 SAGTPVELP 10
A TPVELP
Sbjct: 233 QAITPVELP 241


>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 SAGTPVELP 10
+ G PVE+P
Sbjct: 131 AGGKPVEVP 139


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 1 SSAGTPVELP 10
S G PV+LP
Sbjct: 30 SRFGEPVDLP 39


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 3 AGTPVELP 10
+G PVE+P
Sbjct: 268 SGAPVEIP 275


>sp|HIS6_METST|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaera stadtmanae

Query: 3 AGTPVEL 9
AG PVEL
Sbjct: 33 AGNPVEL 39


>sp|KAE1_METKA|TRNA N6-adenosine threonylcarbamoyltransferase|Methanopyrus kandleri

Query: 1 SSAGTPVELP 10
+ G PVELP
Sbjct: 187 AEEGEPVELP 196


>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 2 SAGTPVELP 10
+ G PVE+P
Sbjct: 131 AGGKPVEVP 139


>sp|PGK_SULAC|PHOSPHOGLYCERATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 AGTPVELP 10
+G P+E+P
Sbjct: 274 SGAPIEIP 281


>sp|PGK_SACS2|PHOSPHOGLYCERATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 AGTPVELP 10
+G P+E+P
Sbjct: 270 SGAPIEIP 277


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 GTPVEL 9
GTP+EL
Sbjct: 53 GTPIEL 58


>sp|GGR1_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanopyrus kandleri (strain AV19 /

Query: 3 AGTPVEL 9
AGTPVE+
Sbjct: 245 AGTPVEV 251


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 AGTPVELP 10
+G P+E+P
Sbjct: 274 SGAPIEIP 281




51|SequenceR|260|251|DRQTPSSAGT

>sp|MPTA_PYRFU|GTP cyclohydrolase MptA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DRQTPSSAGT 10
+RQTP+S T
Sbjct: 115 ERQTPASGKT 124


>sp|Y2231_ARCFU|UPF0104 membrane protein AF_2231|Archaeoglobus fulgidus (strain ATCC

Query: 4 TPSSAG 9
TPSSAG
Sbjct: 83 TPSSAG 88


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 2 RQTPSSAGT 10
RQ P+ AGT
Sbjct: 57 RQPPAFAGT 65


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 2 RQTPSSAGT 10
RQ P+ AGT
Sbjct: 55 RQPPAFAGT 63


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RQTPSSAGT 10
RQ P+ AGT
Sbjct: 58 RQPPAFAGT 66


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RQTPSSAGT 10
RQ P+ AGT
Sbjct: 56 RQPPAFAGT 64


>sp|ACDD_METTH|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanothermobacter

Query: 1 DRQTPSSAGT 10
D Q P S+GT
Sbjct: 296 DLQMPMSSGT 305




52|SequenceR|265|256|LQEQWDRQTP

>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QEQWDRQTP 10
QEQWD+ P
Sbjct: 371 QEQWDKAIP 379


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 WDRQTP 10
WDRQ P
Sbjct: 80 WDRQKP 85


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 QEQWDRQTP 10
+EQWD+ P
Sbjct: 371 REQWDKAVP 379


>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 QEQWDRQTP 10
+EQWD+ P
Sbjct: 371 REQWDKAIP 379


>sp|QUEE_METTH|7-CARBOXY-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 EQWDRQTP 10
EQW + TP
Sbjct: 212 EQWAQNTP 219


>sp|RNP3_PYRHO|RIBONUCLEASE P protein component 3|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QEQWDRQTP 10
QE+WD + P
Sbjct: 170 QEKWDVRYP 178


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QEQWDRQTP 10
QEQW++ P
Sbjct: 372 QEQWNKAIP 380


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 LQEQWDRQ 8
++ WDRQ
Sbjct: 376 IKHDWDRQ 383


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LQEQWDRQT 9
+QE+W R+T
Sbjct: 265 VQERWLRET 273


>sp|RPO1C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 1 LQEQWDR 7
LQE+W R
Sbjct: 166 LQERWPR 172


>sp|RPO1C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 1 LQEQWDR 7
LQE+W R
Sbjct: 166 LQERWPR 172




53|SequenceR|270|261|NHGVVLQEQW

>sp|CSG_METVO|S-LAYER protein|Methanococcus voltae

Query: 1 NHGVVLQEQW 10
N G+V+ E W
Sbjct: 337 NIGIVVNEAW 346


>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NHGVVLQEQW 10
NH +++++W
Sbjct: 394 NHAGIVRDEW 403


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 1 NHGVVLQEQ 9
N GVVL+E+
Sbjct: 176 NGGVVLEER 184


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 5 VLQEQW 10
+LQ+QW
Sbjct: 448 ILQDQW 453


>sp|SDO1_ARCFU|RIBOSOME maturation protein SDO1 homolog|Archaeoglobus fulgidus (strain ATCC

Query: 1 NHGVVLQEQW 10
N G V +E+W
Sbjct: 184 NFGGVTREEW 193


>sp|TRMJ_SULAC|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Sulfolobus acidocaldarius

Query: 3 GVVLQEQW 10
G+VL E W
Sbjct: 147 GIVLYELW 154




54|SequenceR|275|266|RDFSVNHGVV

>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RDFSVNHG 8
RDF+VN G
Sbjct: 152 RDFTVNIG 159


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 DFSVNHGVV 10
D + NHGVV
Sbjct: 33 DCNTNHGVV 41


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RDFSVNH 7
RDFS+ H
Sbjct: 343 RDFSIEH 349


>sp|END4_HALMA|PROBABLE endonuclease 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 RDFSVNHGV 9
RD + +HGV
Sbjct: 53 RDLAADHGV 61


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 1 RDFSVNHGVV 10
RDF+ N G++
Sbjct: 191 RDFTRNIGII 200


>sp|G1PDH_METMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RDFSVNHGVV 10
RD V HGV+
Sbjct: 17 RDVLVGHGVL 26


>sp|G1PDH_METBF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina barkeri (strain Fusaro /

Query: 1 RDFSVNHGVV 10
RD V HGV+
Sbjct: 17 RDVLVGHGVL 26


>sp|G1PDH_METAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina acetivorans (strain ATCC

Query: 1 RDFSVNHGVV 10
RD V HGV+
Sbjct: 17 RDVLVGHGVL 26


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 RDFSVNHG 8
RDF + HG
Sbjct: 494 RDFLIAHG 501


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 RDFSVNHG 8
RDF + HG
Sbjct: 491 RDFLIAHG 498


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RDFSVNHG 8
RDF + HG
Sbjct: 485 RDFLIAHG 492


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RDFSVNHGVV 10
R F V H V+
Sbjct: 90 RSFGVEHAVI 99


>sp|DPCKG_THEAC|GTP-DEPENDENT dephospho-CoA kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RDFSVNHGV 9
RD SV+H V
Sbjct: 23 RDLSVDHPV 31


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 5 VNHGVV 10
+NHG+V
Sbjct: 348 INHGIV 353


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 5 VNHGVV 10
+NHG+V
Sbjct: 348 INHGIV 353


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 5 VNHGVV 10
+NHG+V
Sbjct: 348 INHGIV 353


>sp|TRPB2_PYRAB|TRYPTOPHAN synthase beta chain 2|Pyrococcus abyssi (strain GE5 /

Query: 5 VNHGVV 10
+NHG+V
Sbjct: 348 INHGIV 353


>sp|Y535_METJA|UNCHARACTERIZED protein MJ0535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DFSVNHG 8
DF V+HG
Sbjct: 163 DFDVHHG 169


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 2 DFSVNHG 8
DF V+HG
Sbjct: 153 DFDVHHG 159


>sp|Y123_METJA|UNCHARACTERIZED protein MJ0123|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SVNHGV 9
S+NHG+
Sbjct: 78 SINHGI 83




55|SequenceR|280|271|ERIHARDFSV

>sp|TRUD_METTH|PROBABLE tRNA pseudouridine synthase D|Methanothermobacter

Query: 2 RIHARDFSV 10
R+H RDF V
Sbjct: 19 RVHNRDFEV 27


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 RIHARDFSV 10
R+H RDF +
Sbjct: 490 RLHGRDFLI 498


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RIHARDFSV 10
R+H RDF +
Sbjct: 481 RLHGRDFLI 489


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 RIHARDFSV 10
R+H RDF +
Sbjct: 487 RLHGRDFLI 495


>sp|APAUH_THEKO|N(1)-AMINOPROPYLAGMATINE ureohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IHARDFS 9
+HARD+S
Sbjct: 187 VHARDYS 193


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 1 ERIHAR 6
ERIHAR
Sbjct: 157 ERIHAR 162


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ERIHARDF 8
E HARDF
Sbjct: 106 EATHARDF 113


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ERIHARDF 8
E +HAR+F
Sbjct: 105 ESVHAREF 112


>sp|AGMT_PYRHO|AGMATINASE horikoshii (strain ATCC 700860

Query: 1 ERIHARDFS 9
E +HARD++
Sbjct: 183 EWVHARDYN 191


>sp|ENO_METTP|ENOLASE thermoacetophila (strain DSM 6194

Query: 1 ERIHARD 7
E+IHAR+
Sbjct: 6 EKIHARE 12


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 1 ERIHARDF 8
ERI RDF
Sbjct: 22 ERIDGRDF 29


>sp|RIBL_METKA|FAD synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 HARDFSV 10
H RDFS+
Sbjct: 76 HPRDFSI 82


>sp|KTHY2_SULTO|PROBABLE thymidylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IHARDFS 9
IHA DFS
Sbjct: 66 IHATDFS 72


>sp|RS19_METJA|SMALL ribosomal subunit protein uS19|Methanocaldococcus jannaschii

Query: 2 RIHARDFSV 10
R H RDF +
Sbjct: 84 RTHCRDFVI 92


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 IHARDFS 9
IHAR FS
Sbjct: 6 IHARSFS 12


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 IHARDFS 9
IHA DFS
Sbjct: 6 IHASDFS 12


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ERIHARDFSV 10
ER+ R+FSV
Sbjct: 12 ERLVGREFSV 21


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 3 IHARDF 8
IH+RDF
Sbjct: 132 IHSRDF 137


>sp|RS19_METM7|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C7

Query: 2 RIHARDFSV 10
R H RDF +
Sbjct: 93 RTHCRDFVI 101


>sp|RS19_METVS|SMALL ribosomal subunit protein uS19|Methanococcus vannielii (strain ATCC

Query: 2 RIHARDFSV 10
R H RDF +
Sbjct: 92 RTHCRDFVI 100


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 3 IHARDF 8
IH+RDF
Sbjct: 487 IHSRDF 492


>sp|RS19_METMP|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 2 RIHARDFSV 10
R H RDF +
Sbjct: 93 RTHCRDFVI 101


>sp|RS19_METM6|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C6

Query: 2 RIHARDFSV 10
R H RDF +
Sbjct: 93 RTHCRDFVI 101


>sp|RS19_METM5|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C5

Query: 2 RIHARDFSV 10
R H RDF +
Sbjct: 93 RTHCRDFVI 101


>sp|RS19_META3|SMALL ribosomal subunit protein uS19|Methanococcus aeolicus (strain ATCC

Query: 2 RIHARDFSV 10
R H RDF +
Sbjct: 94 RTHCRDFVI 102


>sp|EI2BL_PYRAB|PUTATIVE translation initiation factor eIF-2B|Pyrococcus abyssi (strain GE5

Query: 3 IHARDFS 9
+H RDFS
Sbjct: 234 LHERDFS 240


>sp|KTHY2_SACS2|PROBABLE thymidylate kinase 2|Saccharolobus solfataricus (strain ATCC

Query: 3 IHARDFS 9
IHA DFS
Sbjct: 65 IHATDFS 71




56|SequenceR|285|276|QILYQERIHA

>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 4 YQERIHA 10
Y ER+HA
Sbjct: 433 YAERLHA 439




57|SequenceR|290|281|RMRSGQILYQ

>sp|Y1161_METJA|UNCHARACTERIZED protein MJ1161|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MRSGQILYQ 10
+ SG+ILYQ
Sbjct: 43 ISSGEILYQ 51


>sp|COMB_THEAC|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma acidophilum (strain

Query: 1 RMRSGQILY 9
R+RSG+I++
Sbjct: 105 RIRSGRIIF 113


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 4 SGQILYQ 10
SGQ++YQ
Sbjct: 431 SGQVIYQ 437




58|SequenceR|295|286|MTDLFRMRSG

>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TDLFRMRSG 10
T+LF++RSG
Sbjct: 48 TELFKLRSG 56


>sp|AROA_METTP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 3 DLFRMRSG 10
D+FRMR G
Sbjct: 213 DIFRMRGG 220


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TDLFRMRSG 10
T LF++RSG
Sbjct: 46 TKLFQLRSG 54


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 TDLFRMRSG 10
T LF++RSG
Sbjct: 46 TKLFQLRSG 54


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 DLFRMRSG 10
DL+R++SG
Sbjct: 48 DLYRLKSG 55


>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DLFRMRSG 10
DL+R++SG
Sbjct: 51 DLYRIKSG 58


>sp|PSB_METRM|PROTEASOME subunit beta|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 TDLFRMRSG 10
T L+R+R+G
Sbjct: 72 TSLYRLRNG 80


>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MTDLFRMRSG 10
+ D+FR +SG
Sbjct: 141 LQDVFRRKSG 150


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 1 MTDLFRM 7
MTDL+R+
Sbjct: 1 MTDLYRL 7


>sp|AROC_METAC|CHORISMATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MTDLFRMRSG 10
M D FRM G
Sbjct: 262 MNDPFRMEQG 271


>sp|SYH_THEVO|HISTIDINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DLFRMRSG 10
DL+R++SG
Sbjct: 48 DLYRIKSG 55




59|SequenceR|300|291|AMHMSMTDLF

>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 AMHMSMTD 8
AMH+SM D
Sbjct: 190 AMHVSMAD 197


>sp|THII_DESA1|TRNA sulfurtransferase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 AMHMSMTDL 9
A+H+SM D
Sbjct: 423 AIHLSMVDF 431


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 HMSMTDLF 10
H S+TD F
Sbjct: 88 HYSLTDFF 95




60|SequenceR|305|296|SLGSIAMHMS

>sp|Y1428_PYRHO|UPF0091 protein PH1428|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LGSIAMH 8
LGSIA+H
Sbjct: 19 LGSIALH 25




61|SequenceR|310|301|SRQFSSLGSI

***** No hits found ******


62|SequenceR|315|306|AAIWLSRQFS

>sp|TRMBR_THELN|HTH-TYPE sugar sensing transcriptional regulator|Thermococcus litoralis

Query: 2 AIWLSRQF 9
AIW SR F
Sbjct: 110 AIWRSRSF 117


>sp|TRMBR_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 2 AIWLSRQF 9
AIW SR F
Sbjct: 110 AIWRSRSF 117


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 4 WLSRQF 9
WLSR F
Sbjct: 404 WLSRSF 409


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AAIWLSRQ 8
A +W+SR+
Sbjct: 148 AVVWISRE 155


>sp|FPOH_METMA|F(420)H(2) dehydrogenase subunit H|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AAIWLSRQFS 10
AA+W+ R+ S
Sbjct: 37 AAVWIERKLS 46


>sp|NFI_THEPD|ENDONUCLEASE V|Thermofilum pendens (strain DSM 2475

Query: 2 AIWLSRQFS 10
A+W+ R F+
Sbjct: 188 AVWIVRMFT 196




63|SequenceR|320|311|HKGQKAAIWL

>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 2 KGQKAAIWL 10
KG+KAAI++
Sbjct: 331 KGKKAAIYM 339


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 2 KGQKAAIW 9
KGQ+ A+W
Sbjct: 506 KGQRHALW 513


>sp|MPTA_PYRAB|GTP cyclohydrolase MptA|Pyrococcus abyssi (strain GE5 /

Query: 1 HKGQKAAIWL 10
HK ++A +W+
Sbjct: 99 HKHKRAEVWI 108


>sp|MRE11_HALSA|DNA double-strand break repair protein|Halobacterium salinarum

Query: 1 HKGQKAAIWL 10
H+G + A WL
Sbjct: 86 HEGTRDAQWL 95


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 1 HKGQKAAIW 9
H G+ + IW
Sbjct: 323 HSGRHSVIW 331


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KGQKAAIWL 10
+GQK A W+
Sbjct: 319 EGQKVAPWV 327


>sp|LEUC1_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 2 KGQKAAIWL 10
+GQK A W+
Sbjct: 318 EGQKVAKWV 326


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GQKAAIW 9
G K+A+W
Sbjct: 283 GSKSAVW 289


>sp|Y1574_ARCFU|UNCHARACTERIZED protein AF_1574|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GQKAAIW 9
GQ+A +W
Sbjct: 253 GQRAIVW 259


>sp|DAPB_METBU|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcoides burtonii (strain DSM 6242

Query: 5 KAAIWL 10
KAAIW+
Sbjct: 242 KAAIWI 247


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 QKAAIW 9
Q+AAIW
Sbjct: 672 QRAAIW 677


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 1 HKGQKAAIW 9
H G K IW
Sbjct: 544 HDGDKIYIW 552


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HKGQKAAIW 9
+KG A+W
Sbjct: 371 YKGYNVAVW 379


>sp|GFCR_METPE|TRANSCRIPTIONAL regulator GfcR|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 HKGQKAAIWL 10
HK AIW+
Sbjct: 172 HKATPLAIWV 181




64|SequenceR|325|316|PPQVKHKGQK

>sp|RL30_HALWD|LARGE ribosomal subunit protein uL30|Haloquadratum walsbyi (strain DSM

Query: 1 PPQVKHKGQK 10
PP+ H+GQK
Sbjct: 120 PPRGGHRGQK 129


>sp|MTMC2_METAC|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 KHKGQK 10
KHKGQK
Sbjct: 142 KHKGQK 147


>sp|NTPTH_SULTO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PQVKHKGQK 10
P+V+ KGQ+
Sbjct: 41 PEVREKGQR 49


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 PQVKHKGQK 10
P + HKG K
Sbjct: 327 PMLAHKGSK 335


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 1 PPQVKHK 7
PP +KH+
Sbjct: 143 PPAIKHE 149


>sp|MTMC2_METBA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina barkeri

Query: 5 KHKGQK 10
KHKG+K
Sbjct: 142 KHKGEK 147


>sp|MTMC1_METBA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina barkeri

Query: 5 KHKGQK 10
KHKG+K
Sbjct: 142 KHKGEK 147


>sp|MTMC1_METAC|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 KHKGQK 10
KHKG+K
Sbjct: 143 KHKGEK 148


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PPQVKHKG 8
PP V H+G
Sbjct: 336 PPYVLHRG 343


>sp|RL30_METAR|LARGE ribosomal subunit protein uL30|Methanocella arvoryzae (strain DSM

Query: 1 PPQVKHKGQK 10
PP+ HKG K
Sbjct: 120 PPRKGHKGLK 129




65|SequenceR|330|321|QGQKTPPQVK

>sp|PRIL_SULTO|DNA primase large subunit PriL|Sulfurisphaera tokodaii (strain DSM

Query: 1 QGQKTPP 7
+G+KTPP
Sbjct: 215 KGRKTPP 221


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GQKTPPQVK 10
G K PP++K
Sbjct: 21 GIKVPPEIK 29


>sp|IF1A_METMP|TRANSLATION initiation factor 1A|Methanococcus maripaludis (strain DSM

Query: 1 QGQKTPPQ 8
+GQ+TPPQ
Sbjct: 2 RGQQTPPQ 9


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 KTPPQV 9
KTPPQV
Sbjct: 36 KTPPQV 41


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 3 QKTPPQV 9
+KTPP+V
Sbjct: 37 KKTPPEV 43


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 1 QGQKTPPQV 9
+G+KTP Q+
Sbjct: 390 KGEKTPKQI 398




66|SequenceR|335|326|KRQSKQGQKT

***** No hits found ******


67|SequenceR|340|331|PGRRAKRQSK

***** No hits found ******


68|SequenceR|345|336|WSSIAPGRRA

>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 3 SIAPGRRA 10
++APGRRA
Sbjct: 317 ALAPGRRA 324


>sp|FLPA_METVS|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus vannielii (strain

Query: 3 SIAPGRR 9
S+APG+R
Sbjct: 29 SLAPGKR 35


>sp|CYAS_METTP|CYSTEATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 WSSIAPGR 8
W+++ PGR
Sbjct: 160 WTTVEPGR 167


>sp|PDXT_METMJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoculleus marisnigri

Query: 2 SSIAPGRRA 10
SS+AP RRA
Sbjct: 31 SSVAPIRRA 39


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WSSIAPGRR 9
WS I G+R
Sbjct: 93 WSGIVAGKR 101


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 WSSIAPGR 8
W++I PG
Sbjct: 40 WNTIVPGH 47




69|SequenceR|350|341|IDLWDWSSIA

>sp|IDI2_ARCFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IDLWDW 6
ID WDW
Sbjct: 238 IDFWDW 243


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IDLWDWSS 8
+D WDW S
Sbjct: 293 VDKWDWES 300


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 IDLWDW 6
ID WDW
Sbjct: 265 IDGWDW 270


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IDLWDW 6
ID+W+W
Sbjct: 1371 IDVWNW 1376


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 DLWDWSSI 9
D WDW S+
Sbjct: 381 DAWDWLSM 388


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DLWDWSSI 9
DL++WS I
Sbjct: 275 DLYEWSQI 282


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 IDLWDWSSI 9
+D WDW I
Sbjct: 270 MDGWDWLDI 278


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IDLWDW 6
I LWDW
Sbjct: 351 IRLWDW 356


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DLWDWSS 8
D WDW S
Sbjct: 304 DDWDWES 310


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 2 DLWDWSS 8
+LWDW++
Sbjct: 117 ELWDWTT 123


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 IDLWDW 6
+D WDW
Sbjct: 270 MDGWDW 275


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 IDLWDW 6
+D WDW
Sbjct: 267 MDGWDW 272


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 IDLWDW 6
+D WDW
Sbjct: 270 MDGWDW 275


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 3 LWDWSS 8
L+DWSS
Sbjct: 142 LYDWSS 147


>sp|FNO_METTM|F420-DEPENDENT NADP reductase|Methanothermobacter marburgensis (strain ATCC

Query: 1 IDLWDWSS 8
IDLWD S+
Sbjct: 114 IDLWDGSA 121


>sp|IF1A_DESA1|TRANSLATION initiation factor 1A|Desulfurococcus amylolyticus (strain DSM

Query: 1 IDLWDWSS 8
+ LWD+SS
Sbjct: 74 VGLWDFSS 81


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IDLWDW 6
IDLWD+
Sbjct: 69 IDLWDY 74


>sp|Y1439_METJA|UNCHARACTERIZED protein MJ1439|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IDLWDWSS 8
+ LW+WS+
Sbjct: 199 VGLWNWSN 206


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IDLWDW 6
ID W+W
Sbjct: 269 IDGWEW 274


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 IDLWDW 6
ID W+W
Sbjct: 270 IDGWEW 275


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 IDLWDWSSIA 10
+ L DW S+A
Sbjct: 95 VKLKDWHSVA 104


>sp|Y686_METJA|UNCHARACTERIZED protein MJ0686|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IDLWDWSSI 9
++ W WSS+
Sbjct: 366 VNKWYWSSV 374


>sp|FNO_METTH|F420-DEPENDENT NADP reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IDLWDWSS 8
IDLW+ S+
Sbjct: 120 IDLWEGSA 127


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 4 WDWSSIA 10
WDW S++
Sbjct: 100 WDWDSVS 106


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IDLWDWSS 8
+DL DW S
Sbjct: 273 VDLTDWIS 280


>sp|GNTDO_HALSB|GENTISATE 1,2-dioxygenase|Haloferax sp

Query: 2 DLWDWSSI 9
D+W W I
Sbjct: 45 DIWKWEDI 52


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 IDLWDW 6
+D W+W
Sbjct: 372 LDFWEW 377


>sp|Y828_PYRHO|PUTATIVE gamma-glutamylcyclotransferase PH0828|Pyrococcus horikoshii (strain

Query: 3 LWDWSS 8
LW+W S
Sbjct: 95 LWEWGS 100




70|SequenceR|355|346|SNVSSIDLWD

>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SNVSSIDLW 9
S++S +D+W
Sbjct: 252 SDISEMDMW 260


>sp|G1PDH_ARCFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SNVSSIDLW 9
SN+SS+ W
Sbjct: 170 SNISSVKDW 178


>sp|ALBA_THEVO|DNA/RNA-BINDING protein Alba|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SNVSSIDL 8
SNVSSI++
Sbjct: 78 SNVSSIEI 85


>sp|ALBA_THEAC|DNA/RNA-BINDING protein Alba|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SNVSSIDL 8
SNVSSI++
Sbjct: 78 SNVSSIEI 85


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SNVSSIDLW 9
SN+S +D W
Sbjct: 511 SNLSELDKW 519


>sp|ALBA_PICTO|DNA/RNA-BINDING protein Alba|Picrophilus torridus (strain ATCC 700027

Query: 1 SNVSSIDL 8
SNVSSI++
Sbjct: 79 SNVSSIEI 86




71|SequenceR|360|351|HVEALSNVSS

>sp|AATC_THEKO|A-TYPE ATP synthase subunit C|Thermococcus kodakarensis (strain ATCC

Query: 3 EALSNVSS 10
E LSNVSS
Sbjct: 77 ETLSNVSS 84


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EALSNVSS 10
E++SNVSS
Sbjct: 96 ESISNVSS 103


>sp|Y449_METJA|UNCHARACTERIZED transporter MJ0449|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HVEALSNVSS 10
HVE SN+S+
Sbjct: 243 HVEVPSNISA 252


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 2 VEALSNV 8
+EALSNV
Sbjct: 300 IEALSNV 306




72|SequenceR|365|356|GVYLRHVEAL

>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GVYLRHVEAL 10
G YL+H+E L
Sbjct: 678 GRYLKHLERL 687


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YLRHVEAL 10
YLRH+E L
Sbjct: 1039 YLRHLEDL 1046


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 3 YLRHVEAL 10
YLRH+E L
Sbjct: 680 YLRHLENL 687


>sp|XACG_HALVD|XYLOSE/ARABINOSE-BINDING protein XacG|Haloferax volcanii (strain ATCC 29605

Query: 1 GVYLRHVEAL 10
G+Y HV+++
Sbjct: 342 GIYFYHVDSI 351


>sp|Y480_METJA|UNCHARACTERIZED protein MJ0480|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VYLRHV 7
+YLRHV
Sbjct: 115 IYLRHV 120


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GVYLRHVEA 9
G +LRH++A
Sbjct: 135 GPFLRHLDA 143


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVYLRHVEA 9
G Y+RH+ A
Sbjct: 39 GFYIRHLTA 47


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 4 LRHVEA 9
LRHVEA
Sbjct: 509 LRHVEA 514




73|SequenceR|370|361|ELPPGGVYLR

>sp|NOB1_PYRHO|ENDORIBONUCLEASE Nob1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LPPGGV 7
LPPGGV
Sbjct: 141 LPPGGV 146


>sp|Y1320_NATPD|PUTATIVE HTH-type transcriptional regulatory protein|Natronomonas

Query: 1 ELPPGGVYLR 10
EL PG VY R
Sbjct: 84 ELKPGVVYFR 93


>sp|Y2519_HALMA|PUTATIVE HTH-type transcriptional regulatory protein|Haloarcula

Query: 1 ELPPGGVYLR 10
EL PG VY R
Sbjct: 84 ELKPGVVYFR 93


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PPGGVYL 9
PP GVY
Sbjct: 500 PPAGVYF 506


>sp|Y2347_METMJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanoculleus

Query: 4 PGGVYLR 10
PGG+Y+R
Sbjct: 120 PGGLYVR 126


>sp|NOB1_PYRAB|ENDORIBONUCLEASE Nob1|Pyrococcus abyssi (strain GE5 /

Query: 1 ELPPGGV 7
E+PPGG+
Sbjct: 138 EMPPGGI 144


>sp|Y273_HALLT|PUTATIVE HTH-type transcriptional regulatory protein|Halorubrum

Query: 1 ELPPGGVYLR 10
EL PG VY R
Sbjct: 84 ELKPGVVYFR 93


>sp|Y294_THEVO|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma volcanium

Query: 4 PGGVYLR 10
PGG Y+R
Sbjct: 121 PGGFYVR 127


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 1 ELPPGGVYLR 10
E PPGG R
Sbjct: 63 EEPPGGTSAR 72


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 LP-PGGVYL 9
LP PGGVY+
Sbjct: 174 LPHPGGVYV 182


>sp|Y1401_SACS2|PUTATIVE CRISPR-associated protein SSO1401|Saccharolobus solfataricus

Query: 2 LPPGGVYLR 10
LPP G++ R
Sbjct: 7 LPPEGLFAR 15


>sp|SRP54_HALSA|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 1 ELPPGGVYLR 10
E PPGG R
Sbjct: 63 EEPPGGTSAR 72


>sp|SRP54_HALS3|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 1 ELPPGGVYLR 10
E PPGG R
Sbjct: 63 EEPPGGTSAR 72


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPPGG 6
LPPGG
Sbjct: 661 LPPGG 665


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 PGGVYL 9
PGGVY+
Sbjct: 176 PGGVYV 181


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 PGGVYL 9
PGGVY+
Sbjct: 176 PGGVYV 181


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 PGGVYL 9
PGGVY+
Sbjct: 176 PGGVYV 181


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELPPGGVYLR 10
E+ PG Y+R
Sbjct: 303 EIKPGTTYVR 312


>sp|PTH_CALMQ|PEPTIDYL-TRNA hydrolase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ELPPGGV 7
ELPPG V
Sbjct: 89 ELPPGTV 95


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 3 PPGGVY 8
PP GVY
Sbjct: 6 PPNGVY 11


>sp|FAU1_HALMA|PROBABLE ribonuclease FAU-1|Haloarcula marismortui (strain ATCC 43049

Query: 1 ELPPGGVY 8
E+ PGG Y
Sbjct: 352 EMSPGGTY 359


>sp|Y3946_HALS3|PUTATIVE HTH-type transcriptional regulatory protein|Halobacterium

Query: 1 ELPPGGVYLR 10
+L PG VY R
Sbjct: 84 DLDPGVVYFR 93


>sp|Y2112_HALSA|PUTATIVE HTH-type transcriptional regulatory protein|Halobacterium

Query: 1 ELPPGGVYLR 10
+L PG VY R
Sbjct: 84 DLDPGVVYFR 93


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELPPGGVYLR 10
EL PG ++LR
Sbjct: 42 ELIPGHIHLR 51


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 ELPPGGVYLR 10
EL PG ++LR
Sbjct: 42 ELIPGHIHLR 51


>sp|TRUA_METAR|TRNA pseudouridine synthase A|Methanocella arvoryzae (strain DSM 22066

Query: 4 PGGVYL 9
PGG+YL
Sbjct: 215 PGGLYL 220


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ELPPGGVYLR 10
E+ PG ++LR
Sbjct: 42 EIVPGHIHLR 51


>sp|Y348_THEGJ|UPF0215 protein TGAM_0348|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ELPPGGVYLR 10
EL PG +YL+
Sbjct: 142 ELIPGKLYLQ 151


>sp|TRUB_NANEQ|PROBABLE tRNA pseudouridine synthase B|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 GGVYLR 10
GGVY+R
Sbjct: 187 GGVYIR 192




74|SequenceR|375|366|ERPEKELPPG

>sp|GATD_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanocaldococcus jannaschii (strain

Query: 1 ERPEKELPP 9
E+P+ ELPP
Sbjct: 56 EKPKYELPP 64


>sp|DGGGP_THEON|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus onnurineus (strain NA1)

Query: 2 RPEKELPPG 10
RPE+ LP G
Sbjct: 69 RPERPLPRG 77


>sp|DGGGP_THEKO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RPEKELPPG 10
RPE+ LP G
Sbjct: 69 RPERPLPRG 77


>sp|DGGGP_THEGJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RPEKELPPG 10
RPE+ LP G
Sbjct: 69 RPERPLPRG 77


>sp|DGGGP_METTH|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 RPEKELPPG 10
RPE+ +P G
Sbjct: 64 RPERPIPSG 72


>sp|DGGGP_METMA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RPEKELPPG 10
RPE+ +P G
Sbjct: 83 RPERPIPSG 91


>sp|DGGGP_METAC|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RPEKELPPG 10
RPE+ +P G
Sbjct: 83 RPERPIPSG 91


>sp|DGGGP_SULAC|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RPEKELPPG 10
+PE+ LP G
Sbjct: 68 KPERPLPSG 76


>sp|GGGPS_METPE|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaerula palustris (strain ATCC

Query: 3 PEKELPPG 10
P+K LPP
Sbjct: 16 PDKSLPPA 23


>sp|HEM3_THEAC|PROBABLE porphobilinogen deaminase|Thermoplasma acidophilum (strain ATCC

Query: 1 ERPEKELPPG 10
E P +LPPG
Sbjct: 107 ENPLSKLPPG 116


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 3 PEKELPPG 10
P KEL PG
Sbjct: 127 PAKELVPG 134


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PEKELPPG 10
PEK+LP G
Sbjct: 661 PEKDLPVG 668


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 4 EKELPP 9
EKELPP
Sbjct: 130 EKELPP 135


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 3 PEKELPPG 10
PE LPPG
Sbjct: 225 PESRLPPG 232


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 RPEKELPPG 10
+PEKE PG
Sbjct: 672 QPEKETNPG 680


>sp|Y444_METMA|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina mazei

Query: 3 PEKELPPG 10
PEKE P G
Sbjct: 204 PEKEEPKG 211


>sp|GGGPS_METB6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoregula boonei (strain DSM 21154

Query: 3 PEKELPPG 10
P+K+L PG
Sbjct: 14 PDKQLGPG 21


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RPEKELPPG 10
+P+KE+P G
Sbjct: 657 KPDKEVPAG 665


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PEKELPPG 10
PEKE+ PG
Sbjct: 647 PEKEVEPG 654


>sp|NOB1_PYRAB|ENDORIBONUCLEASE Nob1|Pyrococcus abyssi (strain GE5 /

Query: 2 RPEKELPPG 10
R KE+PPG
Sbjct: 134 RKFKEMPPG 142


>sp|TIAS_ARCFU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Archaeoglobus fulgidus (strain

Query: 1 ERPEKELPPG 10
E+ E+EL PG
Sbjct: 383 EKVERELQPG 392


>sp|GUAAA_THEKO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermococcus

Query: 5 KELPPG 10
KELPPG
Sbjct: 132 KELPPG 137


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 3 PEKELPP 9
PEK+ PP
Sbjct: 105 PEKDAPP 111


>sp|PSTB_ARCFU|PHOSPHATE import ATP-binding protein PstB|Archaeoglobus fulgidus (strain ATCC

Query: 1 ERPEKELP 8
E+PEKEL
Sbjct: 235 EKPEKELT 242




75|SequenceR|380|371|GKVFLERPEK

>sp|SYY_METST|TYROSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 KVFLERPEK 10
K+ +ERPEK
Sbjct: 262 KILIERPEK 270


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GKVFLERPE 9
KVF ERPE
Sbjct: 31 SKVFAERPE 39


>sp|PMDHL_METTH|PHOSPHOMEVALONATE dehydratase large subunit|Methanothermobacter thermautotrophicus

Query: 1 GKVFLERPEK 10
GKV+L+R E+
Sbjct: 5 GKVYLDRTEE 14


>sp|YJ16_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 3 VFLERPEK 10
VFL+ PEK
Sbjct: 215 VFLQNPEK 222


>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GKVFLERPE 9
K+F ERPE
Sbjct: 31 SKIFAERPE 39


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GKVFLERPE 9
K+F+ERP+
Sbjct: 30 SKIFVERPD 38


>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GKVFLERP 8
K+F+ERP
Sbjct: 240 SKIFIERP 247


>sp|NAH1_METJA|NA(+)/H(+) antiporter 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKVFLERP 8
G +FL RP
Sbjct: 314 GSIFLARP 321


>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 1 GKVFLERPEK 10
K FLERP K
Sbjct: 221 AKKFLERPAK 230


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KVFLERPEK 10
KVFL+ PE+
Sbjct: 182 KVFLDTPEE 190


>sp|SYY_METAC|TYROSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VFLERPEK 10
V +ERPEK
Sbjct: 263 VVIERPEK 270


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 2 KVFLERPEK 10
K+FLE P K
Sbjct: 270 KMFLENPSK 278


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GKVFLERPE 9
GK+ ERP+
Sbjct: 18 GKIMAERPD 26


>sp|SYY_METBF|TYROSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VFLERPEK 10
+ +ERPEK
Sbjct: 263 IVIERPEK 270


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 KVFLERPEK 10
+V +ERPEK
Sbjct: 266 EVTIERPEK 274


>sp|Y169_METJA|UNCHARACTERIZED ATP-binding protein MJ0169|Methanocaldococcus jannaschii (strain

Query: 1 GKVFLERPE 9
GKV +E PE
Sbjct: 191 GKVLVEVPE 199


>sp|SYY_METMA|TYROSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VFLERPEK 10
+ +ERPEK
Sbjct: 263 IVIERPEK 270


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GKVFLERPEK 10
GKV+LE EK
Sbjct: 91 GKVYLEVIEK 100


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 2 KVFLERPEK 10
K+FL++P K
Sbjct: 270 KMFLKKPSK 278


>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 VFLERPEK 10
V +ERPEK
Sbjct: 259 VTIERPEK 266


>sp|RNP1_METST|RIBONUCLEASE P protein component 1|Methanosphaera stadtmanae (strain ATCC

Query: 1 GKVFLERPE 9
GKV RPE
Sbjct: 74 GKVITARPE 82


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 GKVFLERP 8
GK+FL+ P
Sbjct: 528 GKIFLDGP 535


>sp|SPT5_THEKO|TRANSCRIPTION elongation factor Spt5|Thermococcus kodakarensis (strain ATCC

Query: 1 GKVFLERPEK 10
G +F+E P K
Sbjct: 45 GYIFIEAPNK 54


>sp|T2M6_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 KVFLERPEK 10
KVFL P+K
Sbjct: 161 KVFLATPDK 169


>sp|TRUD_SULTO|PROBABLE tRNA pseudouridine synthase D|Sulfurisphaera tokodaii (strain DSM

Query: 2 KVFLERPE 9
KVF+ RP+
Sbjct: 17 KVFINRPD 24


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KVFLERPE 9
+VF+ERP+
Sbjct: 193 EVFVERPK 200




76|SequenceR|385|376|IDKMTGKVFL

>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 1 IDKMTGKVFL 10
+DK+ GKV L
Sbjct: 372 VDKLKGKVLL 381


>sp|RS17_METHJ|SMALL ribosomal subunit protein uS17|Methanospirillum hungatei JF-1

Query: 2 DKMTGKV 8
DKMTG V
Sbjct: 41 DKMTGSV 47


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 4 MTGKVFL 10
+TGKVFL
Sbjct: 934 LTGKVFL 940


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 4 MTGKVFL 10
+TGKVFL
Sbjct: 934 LTGKVFL 940


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 4 MTGKVFL 10
+TGKVFL
Sbjct: 935 LTGKVFL 941


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 4 MTGKVFL 10
+TGKVFL
Sbjct: 258 LTGKVFL 264


>sp|APGM_SULAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IDKMTGKVF 9
IDKM G+V
Sbjct: 325 IDKMIGRVL 333


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain OPF8)

Query: 1 IDKMTGKVF 9
+DK TG +F
Sbjct: 118 LDKFTGPIF 126


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IDKMTGKVFL 10
IDK+ GK L
Sbjct: 16 IDKLGGKTIL 25


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IDKMTGK 7
IDK+TGK
Sbjct: 225 IDKVTGK 231


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 2 DKMTGKVFL 10
DK+TG++ L
Sbjct: 38 DKVTGEILL 46


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 1 IDKMTGKVF 9
+DK GK+F
Sbjct: 152 VDKNEGKIF 160


>sp|SFSA_ARCFU|SUGAR fermentation stimulation protein homolog|Archaeoglobus fulgidus

Query: 1 IDKMTGKVFL 10
++ + GKVFL
Sbjct: 201 VEYLNGKVFL 210




77|SequenceR|390|381|QFNERIDKMT

>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 1 QFNERIDKM 9
+FNE+ID M
Sbjct: 176 EFNEKIDSM 184


>sp|RPO10_NANEQ|DNA-DIRECTED RNA polymerase subunit Rpo10|Nanoarchaeum equitans (strain

Query: 1 QFNERIDK 8
+FNER++K
Sbjct: 20 EFNERVNK 27


>sp|APGM_META3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus aeolicus (strain ATCC

Query: 1 QFNERIDKM 9
+F E+IDKM
Sbjct: 312 EFIEKIDKM 320


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 QFNERIDKMT 10
++NE DKMT
Sbjct: 157 KYNEAKDKMT 166


>sp|RL11_HALSA|LARGE ribosomal subunit protein uL11|Halobacterium salinarum (strain ATCC

Query: 2 FNERID 7
FNER+D
Sbjct: 143 FNERVD 148


>sp|RL11_HALS3|LARGE ribosomal subunit protein uL11|Halobacterium salinarum (strain ATCC

Query: 2 FNERID 7
FNER+D
Sbjct: 143 FNERVD 148


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 QFNERIDKM 9
QF + IDKM
Sbjct: 158 QFTKSIDKM 166


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FNERIDKMT 10
FNE +DK++
Sbjct: 470 FNENMDKLS 478


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 1 QFNERIDKM 9
+FN++ID M
Sbjct: 176 EFNKKIDAM 184


>sp|COBQ_METM6|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C6 /

Query: 2 FNERIDKMT 10
FNE +DK++
Sbjct: 470 FNENMDKLS 478


>sp|COBQ_METM5|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C5 /

Query: 2 FNERIDKMT 10
FNE +DK++
Sbjct: 470 FNENMDKLS 478


>sp|CAS1B_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QFNERIDK 8
FNER++K
Sbjct: 274 HFNERLEK 281


>sp|RNP3_PYRHO|RIBONUCLEASE P protein component 3|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QFNERIDK 8
+FNE +DK
Sbjct: 35 KFNEEVDK 42


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 1 QFNERIDK 8
+FNE IDK
Sbjct: 185 KFNEFIDK 192




78|SequenceR|395|386|YQMLDQFNER

>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YQMLDQFNE 9
Y M+D FNE
Sbjct: 138 YGMIDLFNE 146


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QMLDQFNER 10
+ L+QFNE+
Sbjct: 260 EFLEQFNEK 268


>sp|ACKA_METBF|ACETATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YQMLDQFNE 9
YQ++D NE
Sbjct: 15 YQLIDMINE 23


>sp|KHSE_HALMA|HOMOSERINE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 3 MLDQFNER 10
MLD F ER
Sbjct: 266 MLDAFGER 273


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 1 YQMLDQF 7
YQ++DQ+
Sbjct: 436 YQLIDQY 442


>sp|CDC69_HALSA|ORC1-TYPE DNA replication protein 9|Halobacterium salinarum (strain ATCC

Query: 1 YQMLDQFNE 9
YQ+LD F E
Sbjct: 101 YQILDDFGE 109


>sp|Y1435_PYRAB|UNCHARACTERIZED protein PYRAB14350|Pyrococcus abyssi (strain GE5 /

Query: 2 QMLDQFNER 10
Q L+QF+E+
Sbjct: 261 QFLEQFSEK 269


>sp|RL5_THEKO|LARGE ribosomal subunit protein uL5|Thermococcus kodakarensis (strain

Query: 1 YQMLDQFNE 9
YQMLD+ E
Sbjct: 85 YQMLDRLLE 93




79|SequenceR|400|391|VDQACYQMLD

>sp|MAP2_METTH|METHIONINE aminopeptidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VDQACYQMLD 10
VD C+QM+D
Sbjct: 105 VDDKCHQMMD 114


>sp|QUEE_METKA|7-CARBOXY-7-DEAZAGUANINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 VDQACYQ 7
VD+ CYQ
Sbjct: 188 VDEECYQ 194


>sp|HDRC_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 3 QACYQ 7
QACYQ
Sbjct: 39 QACYQ 43




80|SequenceR|405|396|EHTAWVDQAC

>sp|Y352_METJA|UNCHARACTERIZED protein MJ0352|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EHTAWVDQA 9
EH W+D++
Sbjct: 34 EHNNWIDES 42


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 EHTAWVD 7
EHT W D
Sbjct: 196 EHTGWYD 202


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 3 TAWVDQA 9
TAWV+QA
Sbjct: 481 TAWVEQA 487


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HTAWVDQ 8
H+AW++Q
Sbjct: 347 HSAWLEQ 353


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HTAWVDQ 8
H+AW++Q
Sbjct: 347 HSAWLEQ 353


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EHTAWVDQA 9
E AW++QA
Sbjct: 190 EDVAWLEQA 198


>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 EHTAWVDQ 8
E AWVD+
Sbjct: 25 EKIAWVDE 32


>sp|Y816_METB6|UPF0173 metal-dependent hydrolase Mboo_0816|Methanoregula boonei (strain

Query: 2 HTAWVDQAC 10
H W+ AC
Sbjct: 2 HLTWLGHAC 10


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EHTAWVDQAC 10
E AW Q C
Sbjct: 256 ERWAWFSQGC 265


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EHTAWV 6
+H+AWV
Sbjct: 136 QHSAWV 141


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 EHTAWVD 7
EH AW+D
Sbjct: 440 EHRAWLD 446


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 EHTAWVD 7
EH AW+D
Sbjct: 440 EHRAWLD 446


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HTAWVDQ 8
HT WV++
Sbjct: 142 HTKWVNE 148


>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EHTAWVDQ 8
EH WV++
Sbjct: 320 EHAEWVEK 327


>sp|DPS_PYRFU|DNA protection during starvation protein|Pyrococcus furiosus (strain

Query: 1 EHTAWVDQ 8
EH AW ++
Sbjct: 150 EHEAWFEE 157


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EHTAWVDQ 8
E AWVD+
Sbjct: 25 EKLAWVDE 32


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 2 HTAWVDQ 8
HT WV++
Sbjct: 142 HTRWVNE 148


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 EHTAWVDQAC 10
EH +VD+ C
Sbjct: 188 EHWQFVDRLC 197


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HTAWVDQ 8
H W+DQ
Sbjct: 505 HRPWIDQ 511




81|SequenceR|410|401|QQQFVEHTAW

>sp|RS2_CENSY|SMALL ribosomal subunit protein uS2|Cenarchaeum symbiosum (strain A)

Query: 3 QFVEHTA 9
QF+EHT
Sbjct: 61 QFIEHTG 67


>sp|DPS_SACS2|DNA protection during starvation protein|Saccharolobus solfataricus

Query: 2 QQFVEHTAW 10
Q+ +EH AW
Sbjct: 154 QEEIEHEAW 162


>sp|DPS_PYRFU|DNA protection during starvation protein|Pyrococcus furiosus (strain

Query: 5 VEHTAW 10
+EH AW
Sbjct: 149 IEHEAW 154


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 5 VEHTAW 10
VEH AW
Sbjct: 250 VEHFAW 255




82|SequenceR|415|406|LFLPLQQQFV

>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain

Query: 2 FLPLQQQFV 10
F+P+Q+QF+
Sbjct: 62 FIPIQRQFL 70




83|SequenceR|420|411|HPCRELFLPL

>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 CRELFLPL 10
CR +FLPL
Sbjct: 39 CRNVFLPL 46


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 HPCRELFLP 9
+P R L+LP
Sbjct: 589 YPTRPLYLP 597


>sp|HIS6_METLZ|IMIDAZOLE glycerol phosphate synthase subunit|Methanocorpusculum labreanum

Query: 5 ELFLPL 10
ELFLPL
Sbjct: 73 ELFLPL 78


>sp|HIS6_METHJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanospirillum hungatei

Query: 5 ELFLPL 10
ELFLPL
Sbjct: 73 ELFLPL 78


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PCREL 6
PCREL
Sbjct: 213 PCREL 217


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 CRELFLPL 10
C+EL LP+
Sbjct: 312 CKELNLPI 319


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 3 CRELFLPL 10
C+EL +PL
Sbjct: 470 CKELNIPL 477


>sp|RNP4_SULTO|RIBONUCLEASE P protein component 4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 CRELFLPL 10
CR+ F PL
Sbjct: 60 CRKCFTPL 67


>sp|NIKR_HALSA|PUTATIVE nickel-responsive regulator|Halobacterium salinarum (strain ATCC

Query: 1 HPCRELFL 8
H C ELF+
Sbjct: 94 HHCMELFV 101


>sp|NIKR_HALS3|PUTATIVE nickel-responsive regulator|Halobacterium salinarum (strain ATCC

Query: 1 HPCRELFL 8
H C ELF+
Sbjct: 94 HHCMELFV 101


>sp|COMDE_METAC|SULFOPYRUVATE decarboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PCRELF 7
PC+EL+
Sbjct: 225 PCKELY 230


>sp|NIKR_NATPD|PUTATIVE nickel-responsive regulator|Natronomonas pharaonis (strain ATCC

Query: 1 HPCRELFL 8
H C ELF+
Sbjct: 94 HYCMELFI 101


>sp|NIKR_HALWD|PUTATIVE nickel-responsive regulator|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HPCRELFL 8
H C ELF+
Sbjct: 94 HHCMELFV 101




84|SequenceR|425|416|ALTVPHPCRE

>sp|Y1332_METJA|UNCHARACTERIZED GTP-binding protein MJ1332|Methanocaldococcus jannaschii (strain

Query: 2 LTVPHPCRE 10
+T P PC+E
Sbjct: 45 ITSPCPCKE 53


>sp|GLYA_PYRAE|SERINE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 PHPCRE 10
PHP RE
Sbjct: 176 PHPVRE 181


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 5 PHPCRE 10
PHP RE
Sbjct: 183 PHPTRE 188


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 PHPCRE 10
PHP RE
Sbjct: 176 PHPIRE 181


>sp|Y3508_METJA|PROBABLE helicase MJECL08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALTVPHPCRE 10
ALTV + C+E
Sbjct: 248 ALTVKYECKE 257


>sp|DPHB_METBU|DIPHTHINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ALTVPHP 7
++T+PHP
Sbjct: 132 SVTIPHP 138


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ALTVPHPCRE 10
A+ +P PC E
Sbjct: 157 AMGIPRPCIE 166


>sp|Y1312_METJA|UPF0026 protein MJ1312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALTVPHPCRE 10
A+T HP RE
Sbjct: 261 AITSVHPMRE 270


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 3 TVPHPC 8
TVP+PC
Sbjct: 109 TVPYPC 114


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ALTVPHPCRE 10
++ VP PC E
Sbjct: 157 SMGVPRPCVE 166


>sp|MFNA_ARCFU|PROBABLE L-aspartate decarboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 3 TVPHP 7
TVPHP
Sbjct: 26 TVPHP 30


>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ALTVPHPCRE 10
++ VP PC E
Sbjct: 157 SMGVPRPCVE 166


>sp|AATE_THEPD|A-TYPE ATP synthase subunit E|Thermofilum pendens (strain DSM 2475

Query: 4 VPHPCR 9
V HPCR
Sbjct: 133 VVHPCR 138


>sp|RL10E_METJA|LARGE ribosomal subunit protein uL16|Methanocaldococcus jannaschii

Query: 1 ALTVPHPCR 9
A+ +P PCR
Sbjct: 154 AMKLPVPCR 162


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 VPHPCR 9
VPHP R
Sbjct: 205 VPHPIR 210


>sp|PGMI_PYRCJ|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum calidifontis

Query: 1 ALTVPHPCRE 10
ALT PH RE
Sbjct: 228 ALTSPHIPRE 237


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LTVPHPC 8
LT PHP
Sbjct: 237 LTAPHPT 243


>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 3 TVPHPC 8
TVPHP
Sbjct: 19 TVPHPS 24




85|SequenceR|430|421|MELMGALTVP

>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MELMGALTVP 10
MELMGA +P
Sbjct: 160 MELMGAKVIP 169


>sp|TRPB_METKA|TRYPTOPHAN synthase beta chain|Methanopyrus kandleri (strain AV19 /

Query: 1 MELMGALTVP 10
MELMGA P
Sbjct: 151 MELMGAKVHP 160


>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 MELMGALTVP 10
MELMGA P
Sbjct: 148 MELMGAKVHP 157


>sp|PDXS_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum calidifontis (strain

Query: 2 ELMGALTVP 10
E+M A+T+P
Sbjct: 107 EVMDAITIP 115


>sp|PDXS_PYRHO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus horikoshii (strain

Query: 2 ELMGALTVP 10
E+M A+T+P
Sbjct: 75 EIMDAVTIP 83


>sp|GATA_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 1 MELMGALTVP 10
+E MGA VP
Sbjct: 242 LESMGATAVP 251


>sp|PDXS_THEON|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus onnurineus

Query: 2 ELMGALTVP 10
E+M A+T+P
Sbjct: 75 EIMDAVTIP 83


>sp|PDXS_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus kodakarensis

Query: 2 ELMGALTVP 10
E+M A+T+P
Sbjct: 75 EIMDAVTIP 83


>sp|PDXS_PYRFU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus furiosus (strain

Query: 2 ELMGALTVP 10
E+M A+T+P
Sbjct: 75 EIMDAVTIP 83


>sp|PDXS_THEGJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus gammatolerans

Query: 2 ELMGALTVP 10
E+M A+T+P
Sbjct: 75 EIMDAVTIP 83


>sp|PDXS_PYRAB|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus abyssi (strain GE5

Query: 2 ELMGALTVP 10
E+M A+T+P
Sbjct: 75 EIMDAVTIP 83




86|SequenceR|435|426|LYSVGMELMG

>sp|CRUF_HALJT|BISANHYDROBACTERIORUBERIN hydratase|Haloarcula japonica (strain ATCC 49778

Query: 1 LYSVGMELMG 10
LYS G+EL+G
Sbjct: 99 LYSYGIELVG 108


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 LYSVGMELMG 10
L + G+ELMG
Sbjct: 958 LQAAGLELMG 967


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 LYSVGMELMG 10
L + G+ELMG
Sbjct: 957 LQAAGLELMG 966


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 LYSVGMELMG 10
L + G+ELMG
Sbjct: 957 LQAAGLELMG 966


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 1 LYSVGMELMG 10
L + G+ELMG
Sbjct: 281 LQAAGLELMG 290


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 4 VGMELMG 10
VGM+LMG
Sbjct: 445 VGMQLMG 451


>sp|PYRK_METTH|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanothermobacter

Query: 2 YSVGMELMG 10
Y G ELMG
Sbjct: 93 YGRGFELMG 101


>sp|OTC_METTH|ORNITHINE carbamoyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 YSVGMELM 9
Y V MELM
Sbjct: 239 YQVNMELM 246


>sp|ENDA_SULAC|TRNA-SPLICING endonuclease|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LYSVGME 7
LY +GME
Sbjct: 77 LYKIGME 83




87|SequenceR|440|431|NQNVPLYSVG

>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 1 NQNVPLYSVG 10
N+N+P+ +VG
Sbjct: 527 NENIPMATVG 536


>sp|HEM3_PICTO|PROBABLE porphobilinogen deaminase|Picrophilus torridus (strain ATCC

Query: 1 NQNVPLYSVG 10
N + PLYS+G
Sbjct: 43 NLDSPLYSIG 52


>sp|RL4_THEAC|LARGE ribosomal subunit protein uL4|Thermoplasma acidophilum (strain

Query: 1 NQNVPLYSV 9
N VP+YSV
Sbjct: 2 NTKVPIYSV 10


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NQNVPLY 7
N+N PLY
Sbjct: 320 NENAPLY 326


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 NQNVPLYSV 9
N NV LYSV
Sbjct: 22 NANVELYSV 30


>sp|RL4_THEVO|LARGE ribosomal subunit protein uL4|Thermoplasma volcanium (strain ATCC

Query: 1 NQNVPLYSV 9
N VP+YS+
Sbjct: 2 NTKVPIYSI 10


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NQNVPLYSVG 10
N N PL+++G
Sbjct: 474 NNNNPLFTLG 483


>sp|HEM3_THEAC|PROBABLE porphobilinogen deaminase|Thermoplasma acidophilum (strain ATCC

Query: 5 PLYSVG 10
PLYS+G
Sbjct: 48 PLYSIG 53


>sp|COFH2_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanococcus maripaludis (strain DSM

Query: 1 NQNVPLYSVG 10
++N PLY G
Sbjct: 250 HENTPLYKSG 259


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 1 NQNVPLY 7
N NVP Y
Sbjct: 434 NSNVPFY 440


>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 NQNVPLYSVG 10
++ VP+YS G
Sbjct: 163 DEGVPIYSPG 172


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 4 VPLYSVG 10
VP+Y VG
Sbjct: 120 VPIYEVG 126


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 4 VPLYSVG 10
VP+Y VG
Sbjct: 120 VPIYEVG 126


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VPLYSVG 10
VP+Y VG
Sbjct: 120 VPIYEVG 126


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 QNVPLY 7
QN+PLY
Sbjct: 372 QNLPLY 377


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 VPLYSVG 10
VP+Y VG
Sbjct: 120 VPIYEVG 126


>sp|MDH_SULAC|MALATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 NVPLYSVG 10
N+P Y VG
Sbjct: 158 NIPAYEVG 165


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 4 VPLYSVG 10
VP+Y VG
Sbjct: 120 VPIYEVG 126


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 4 VPLYSVG 10
VP+Y VG
Sbjct: 120 VPIYEVG 126


>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 VPLYSV 9
VPLYSV
Sbjct: 89 VPLYSV 94


>sp|SURE_METBF|5'-NUCLEOTIDASE SurE|Methanosarcina barkeri (strain Fusaro /

Query: 4 VPLYSVG 10
+P YSVG
Sbjct: 67 IPAYSVG 73




88|SequenceR|445|436|LYREWNQNVP

>sp|TRMY_METJA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocaldococcus

Query: 3 REWNQNVP 10
++WNQ+ P
Sbjct: 103 KDWNQSTP 110


>sp|FLPA_AERPE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 2 YREWN 6
YREWN
Sbjct: 52 YREWN 56


>sp|FLPA_PYRIL|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum islandicum (strain

Query: 2 YREWN 6
YREWN
Sbjct: 53 YREWN 57


>sp|FLPA_SULTO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfurisphaera tokodaii (strain

Query: 2 YREWN 6
YREWN
Sbjct: 51 YREWN 55


>sp|FLPA_PYRAE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum aerophilum (strain

Query: 2 YREWN 6
YREWN
Sbjct: 53 YREWN 57


>sp|FLPA_PYRNV|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum neutrophilum (strain

Query: 2 YREWN 6
YREWN
Sbjct: 53 YREWN 57


>sp|FLPA_PYRAR|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum arsenaticum (strain

Query: 2 YREWN 6
YREWN
Sbjct: 53 YREWN 57


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 1 LYREWN 6
L+REWN
Sbjct: 266 LHREWN 271


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 LYREWN 6
L+REWN
Sbjct: 266 LHREWN 271


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LYREWN 6
L+REWN
Sbjct: 266 LHREWN 271


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LYREWN 6
L+REWN
Sbjct: 266 LHREWN 271


>sp|FLPA_PYRCJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum calidifontis (strain

Query: 2 YREWN 6
YREWN
Sbjct: 53 YREWN 57


>sp|FLPA_SULAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfolobus acidocaldarius

Query: 2 YREWN 6
YREWN
Sbjct: 51 YREWN 55


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 1 LYREWN 6
L+REWN
Sbjct: 266 LHREWN 271


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LYREWN 6
L+REWN
Sbjct: 266 LHREWN 271


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 LYREWN 6
L+REWN
Sbjct: 266 LHREWN 271


>sp|FLPA_SACI3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 2 YREWN 6
YREWN
Sbjct: 51 YREWN 55


>sp|FLPA_SACS2|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus solfataricus

Query: 2 YREWN 6
YREWN
Sbjct: 51 YREWN 55


>sp|LYSY_PICTO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 LYREW 5
LYREW
Sbjct: 108 LYREW 112


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 2 YREWN 6
YREWN
Sbjct: 52 YREWN 56


>sp|GCH3_PYRIL|GTP cyclohydrolase III|Pyrobaculum islandicum (strain DSM 4184

Query: 2 YREWNQNV 9
YREW +++
Sbjct: 12 YREWTESL 19


>sp|GCH3_PYRCJ|GTP cyclohydrolase III|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YREWNQNV 9
YREW +++
Sbjct: 12 YREWTESL 19


>sp|GCH3_PYRAE|GTP cyclohydrolase III|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 YREWNQNV 9
YREW +++
Sbjct: 12 YREWTESL 19


>sp|GCH3_PYRNV|GTP cyclohydrolase III|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 YREWNQNV 9
YREW +++
Sbjct: 12 YREWTESL 19


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 1 LYREWNQ 7
LY+ WN+
Sbjct: 317 LYKRWNE 323


>sp|RIFK_PICTO|RIBOFLAVIN kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 LYREWNQ 7
LYRE+N+
Sbjct: 73 LYREYNE 79


>sp|GCH3_PYRAR|GTP cyclohydrolase III|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 YREWNQNV 9
YREW +++
Sbjct: 12 YREWTESL 19


>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YREWNQNVP 10
Y +W++N+P
Sbjct: 157 YAKWDENLP 165


>sp|PSB1_THEKO|PROTEASOME subunit beta 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YREWNQ 7
YREW++
Sbjct: 190 YREWSE 195


>sp|PSA_THEAC|PROTEASOME subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LYREWNQNVP 10
L RE+ +N+P
Sbjct: 176 LEREYKENLP 185


>sp|GCH3_AERPE|GTP cyclohydrolase III|Aeropyrum pernix (strain ATCC 700893

Query: 2 YREWNQNV 9
YREW + +
Sbjct: 17 YREWTEEL 24


>sp|FLPA_METJA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanocaldococcus jannaschii

Query: 2 YREWNQN 8
YR WN N
Sbjct: 49 YRIWNPN 55


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 2 YREWNQNV 9
YR +N NV
Sbjct: 54 YRRYNSNV 61


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 YREWNQNVP 10
Y W NVP
Sbjct: 206 YHNWAINVP 214


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YREWNQNVP 10
Y W NVP
Sbjct: 206 YHNWAINVP 214


>sp|FLPA_SACI7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 2 YREWN 6
YREWN
Sbjct: 51 YREWN 55


>sp|FLPA_SACI6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 2 YREWN 6
YREWN
Sbjct: 51 YREWN 55


>sp|FLPA_SACI4|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 2 YREWN 6
YREWN
Sbjct: 51 YREWN 55


>sp|FLPA_SACI2|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 2 YREWN 6
YREWN
Sbjct: 51 YREWN 55


>sp|FLPA_SACI1|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 2 YREWN 6
YREWN
Sbjct: 51 YREWN 55


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 YREWNQNVP 10
Y W NVP
Sbjct: 206 YHNWAINVP 214


>sp|PYLS_METBU|PYRROLYSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LYREWNQNVP 10
L REW N P
Sbjct: 369 LDREWGVNKP 378


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 1 LYREWNQNV 9
+Y +W QN+
Sbjct: 99 VYEKWTQNL 107


>sp|FLPA_METVS|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus vannielii (strain

Query: 2 YREWNQN 8
YR WN N
Sbjct: 49 YRIWNPN 55


>sp|FLPA_METVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus voltae

Query: 2 YREWNQN 8
YR WN N
Sbjct: 47 YRVWNPN 53


>sp|FLPA_METM6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 2 YREWNQN 8
YR WN N
Sbjct: 49 YRVWNPN 55


>sp|Y423_METJA|UNCHARACTERIZED ATP-binding protein MJ0423|Methanocaldococcus jannaschii (strain

Query: 1 LYREWNQN 8
L R+WN+N
Sbjct: 17 LERKWNEN 24


>sp|NADM_THEVO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 WNQNVP 10
W QNVP
Sbjct: 146 WEQNVP 151


>sp|FLPA_METM5|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 2 YREWNQN 8
YR WN N
Sbjct: 49 YRVWNPN 55


>sp|FLPA_METM7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 2 YREWNQN 8
YR WN N
Sbjct: 49 YRVWNPN 55


>sp|CAS1_METJA|CRISPR-ASSOCIATED endonuclease Cas1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YREWNQNVP 10
YR W++ +P
Sbjct: 157 YRLWDETLP 165


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 2 YREWNQNV 9
Y EW QN+
Sbjct: 352 YFEWVQNI 359


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 REWNQNVP 10
R+W N+P
Sbjct: 260 RQWGLNLP 267


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YREWNQNV 9
Y EW QN+
Sbjct: 353 YFEWVQNI 360


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 2 YREWNQNV 9
Y EW QN+
Sbjct: 353 YFEWVQNI 360


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YREWNQNV 9
Y EW QN+
Sbjct: 353 YFEWVQNI 360


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LYREWN 6
LY+EW+
Sbjct: 309 LYKEWD 314


>sp|FLPA_METMP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 2 YREWNQN 8
YR WN N
Sbjct: 49 YRIWNPN 55


>sp|FLPA_THESM|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus sibiricus (strain

Query: 2 YREWNQN 8
YR WN N
Sbjct: 47 YRIWNPN 53


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 2 YREWNQNV 9
Y EW QN+
Sbjct: 353 YFEWVQNI 360


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 2 YREWNQNV 9
Y EW QN+
Sbjct: 353 YFEWVQNI 360


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YREWNQNV 9
Y EW QN+
Sbjct: 354 YFEWVQNI 361


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 2 YREWNQNV 9
Y EW QN+
Sbjct: 352 YFEWVQNI 359


>sp|FLPA_PYRHO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus horikoshii (strain

Query: 2 YREWNQN 8
YR WN N
Sbjct: 48 YRIWNPN 54


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 2 YREWNQNVP 10
YR+W N P
Sbjct: 24 YRDWWPNQP 32


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LYREWN 6
LY+EW+
Sbjct: 351 LYKEWD 356


>sp|FLPA_META3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus aeolicus (strain

Query: 2 YREWNQN 8
YR WN N
Sbjct: 50 YRIWNPN 56


>sp|GCH3_SACI6|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YREWNQNV 9
YREW + +
Sbjct: 11 YREWTERL 18


>sp|GCH3_SACI4|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YREWNQNV 9
YREW + +
Sbjct: 11 YREWTERL 18


>sp|GCH3_SACI3|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.27)

Query: 2 YREWNQNV 9
YREW + +
Sbjct: 11 YREWTERL 18


>sp|GCH3_SACI7|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YREWNQNV 9
YREW + +
Sbjct: 11 YREWTERL 18


>sp|GCH3_SACI2|GTP cyclohydrolase III|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YREWNQNV 9
YREW + +
Sbjct: 11 YREWTERL 18


>sp|GCH3_SACI1|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YREWNQNV 9
YREW + +
Sbjct: 11 YREWTERL 18




89|SequenceR|450|441|GQAEALYREW

>sp|FAU1_PYRCJ|PROBABLE ribonuclease FAU-1|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 QAEALYRE 9
+AEALYRE
Sbjct: 206 EAEALYRE 213


>sp|Y237_THEAC|MEMO1 family protein Ta0237|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 AEALYRE 9
AEALYR+
Sbjct: 105 AEALYRD 111


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QAEALYRE 9
+AE LYRE
Sbjct: 207 EAEVLYRE 214


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GQAEALYR 8
G AEA+YR
Sbjct: 323 GNAEAIYR 330


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 3 AEALYRE 9
EALYRE
Sbjct: 277 GEALYRE 283


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GQAEALYREW 10
G+AE REW
Sbjct: 993 GKAEGYVREW 1002


>sp|DTDA_IGNH4|D-AMINOACYL-TRNA deacylase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GQAEALYREW 10
G AEAL RE+
Sbjct: 16 GAAEALEREY 25


>sp|CSA1_THETK|CRISPR-ASSOCIATED exonuclease Csa1|Thermoproteus tenax (strain ATCC 35583

Query: 2 QAEALYR 8
+AEALYR
Sbjct: 118 KAEALYR 124




90|SequenceR|455|446|LEEYTGQAEA

>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 1 LEEYTG 6
LEEYTG
Sbjct: 573 LEEYTG 578


>sp|Y1023_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 LEEYTGQAE 9
+EEYTG E
Sbjct: 54 IEEYTGYVE 62


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain ATCC

Query: 2 EEYTGQAEA 10
++YTG A+A
Sbjct: 154 QDYTGDAQA 162




91|SequenceR|460|451|KMERQLEEYT

>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 2 MERQLEEYT 10
+ER +EEYT
Sbjct: 44 IERVMEEYT 52


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KMERQLEEY 9
K+ER L EY
Sbjct: 658 KIERDLNEY 666




92|SequenceR|465|456|DMLSKKMERQ

>sp|NFI_SACS2|ENDONUCLEASE V|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DMLSKKMERQ 10
DML+KK++++
Sbjct: 189 DMLTKKIKKE 198


>sp|NFI_SACI7|ENDONUCLEASE V|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DMLSKKMERQ 10
DML+KK++++
Sbjct: 189 DMLTKKIKKE 198


>sp|NFI_SACI6|ENDONUCLEASE V|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DMLSKKMERQ 10
DML+KK++++
Sbjct: 189 DMLTKKIKKE 198


>sp|NFI_SACI4|ENDONUCLEASE V|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DMLSKKMERQ 10
DML+KK++++
Sbjct: 189 DMLTKKIKKE 198


>sp|NFI_SACI2|ENDONUCLEASE V|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DMLSKKMERQ 10
DML+KK++++
Sbjct: 189 DMLTKKIKKE 198


>sp|NFI_SACI1|ENDONUCLEASE V|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DMLSKKMERQ 10
DML+KK++++
Sbjct: 189 DMLTKKIKKE 198


>sp|NFI_SACI3|ENDONUCLEASE V|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DMLSKKMERQ 10
DML+KK +++
Sbjct: 189 DMLTKKTKKE 198


>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DMLSKKMERQ 10
DML +MER+
Sbjct: 10 DMLPDEMERR 19




93|SequenceR|470|461|ADNALDMLSK

>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 1 ADNALDMLSK 10
AD L+MLSK
Sbjct: 569 ADGPLEMLSK 578


>sp|TYW3_AERPE|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 ADNALDML 8
D+ALDML
Sbjct: 152 GDDALDML 159


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 2 DNALDMLSK 10
D ALD LSK
Sbjct: 57 DEALDRLSK 65


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 DNALDMLSK 10
DN++D+L K
Sbjct: 458 DNSMDLLVK 466


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 DNALDMLSK 10
DN++D+L K
Sbjct: 458 DNSMDLLVK 466


>sp|Y1068_METJA|UNCHARACTERIZED membrane protein MJ1068|Methanocaldococcus jannaschii (strain

Query: 1 ADNALDML 8
A+N LDML
Sbjct: 75 AENRLDML 82


>sp|RL23_PYRAE|LARGE ribosomal subunit protein uL23|Pyrobaculum aerophilum (strain

Query: 3 NALDMLSK 10
NA+D+LSK
Sbjct: 70 NAMDLLSK 77


>sp|TLDD_SACS2|ZINC metalloprotease TldD homolog|Saccharolobus solfataricus (strain

Query: 3 NALDMLSK 10
NA++M+SK
Sbjct: 400 NAIEMISK 407


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DNALDMLSK 10
DNALD K
Sbjct: 777 DNALDYFEK 785




94|SequenceR|475|466|SLLQCADNAL

>sp|RS4E_METVS|SMALL ribosomal subunit protein eS4|Methanococcus vannielii (strain

Query: 3 LQCADNA 9
L+CADNA
Sbjct: 53 LKCADNA 59


>sp|RS4E_METVA|SMALL ribosomal subunit protein eS4|Methanococcus vannielii

Query: 3 LQCADNA 9
L+CADNA
Sbjct: 53 LKCADNA 59


>sp|RL14_NATPD|LARGE ribosomal subunit protein uL14|Natronomonas pharaonis (strain

Query: 1 SLLQCADN 8
SL+ CADN
Sbjct: 16 SLITCADN 23


>sp|RL14_HALSA|LARGE ribosomal subunit protein uL14|Halobacterium salinarum (strain

Query: 1 SLLQCADN 8
SL+ CADN
Sbjct: 16 SLITCADN 23


>sp|RL14_HALS3|LARGE ribosomal subunit protein uL14|Halobacterium salinarum (strain

Query: 1 SLLQCADN 8
SL+ CADN
Sbjct: 16 SLITCADN 23


>sp|RL14_HALMA|LARGE ribosomal subunit protein uL14|Haloarcula marismortui (strain

Query: 1 SLLQCADN 8
SL+ CADN
Sbjct: 16 SLITCADN 23


>sp|RL14_HALLT|LARGE ribosomal subunit protein uL14|Halorubrum lacusprofundi (strain

Query: 1 SLLQCADN 8
SL+ CADN
Sbjct: 16 SLITCADN 23


>sp|RL14_HALWD|LARGE ribosomal subunit protein uL14|Haloquadratum walsbyi (strain DSM

Query: 1 SLLQCADN 8
SL+ CADN
Sbjct: 16 SLVTCADN 23


>sp|Y1345_METJA|TPR repeat-containing protein MJ1345|Methanocaldococcus jannaschii

Query: 3 LQCADNAL 10
L+C DNAL
Sbjct: 167 LECFDNAL 174


>sp|RL14_METTP|LARGE ribosomal subunit protein uL14|Methanothrix thermoacetophila

Query: 1 SLLQCADN 8
+ L+CADN
Sbjct: 16 TYLECADN 23


>sp|RL14_KORCO|LARGE ribosomal subunit protein uL14|Korarchaeum cryptofilum (strain

Query: 3 LQCADN 8
L+CADN
Sbjct: 27 LKCADN 32


>sp|RL14_METTH|LARGE ribosomal subunit protein uL14|Methanothermobacter

Query: 3 LQCADN 8
LQC DN
Sbjct: 18 LQCVDN 23


>sp|RL14_METS3|LARGE ribosomal subunit protein uL14|Methanobrevibacter smithii (strain

Query: 3 LQCADN 8
LQC DN
Sbjct: 18 LQCVDN 23


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LLQCADNAL 10
LL C DN++
Sbjct: 408 LLGCGDNSI 416


>sp|Y2657_METHJ|UPF0210 protein Mhun_2657|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SLLQCADNAL 10
SLL C D +L
Sbjct: 29 SLLDCCDASL 38


>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SLLQCADNAL 10
SLL C D+ L
Sbjct: 29 SLLDCCDSDL 38




95|SequenceR|480|471|KYREGSLLQC

>sp|CSL4_ARCFU|EXOSOME complex component Csl4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 REGSLLQC 10
REG +L+C
Sbjct: 152 REGDILKC 159


>sp|PYRI_CENSY|ASPARTATE carbamoyltransferase regulatory chain|Cenarchaeum symbiosum (strain

Query: 3 REGSLLQC 10
REG +L+C
Sbjct: 131 REGPVLKC 138


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KYREGSL 7
KYREG +
Sbjct: 324 KYREGDI 330




96|SequenceR|485|476|LWPDEKYREG

>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 WPDEKYRE 9
WPDE YRE
Sbjct: 472 WPDESYRE 479


>sp|AROB_AERPE|3-DEHYDROQUINATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PDEKYREG 10
PDE YR+G
Sbjct: 174 PDEGYRDG 181


>sp|FLPA_PYRIL|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum islandicum (strain

Query: 2 WPDEKYRE 9
W DE+YRE
Sbjct: 48 WRDEEYRE 55


>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus (strain

Query: 1 LWPDEKY 7
L+PDE+Y
Sbjct: 472 LYPDERY 478


>sp|PUR7_CENSY|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Cenarchaeum symbiosum (strain A)

Query: 1 LWPDEKYREG 10
LWP E+Y G
Sbjct: 201 LWPAEQYSPG 210


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 2 WPDEKYRE 9
W ++KYRE
Sbjct: 156 WGEKKYRE 163


>sp|LPLAN_THEAC|LIPOATE-PROTEIN ligase A subunit 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PDEKYRE 9
PDEK+R+
Sbjct: 180 PDEKFRD 186


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WPDEKYR 8
WPDEK R
Sbjct: 710 WPDEKRR 716


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 1 LWPDEKY 7
L+PDE+Y
Sbjct: 859 LYPDERY 865


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis (strain

Query: 1 LWPDEKY 7
L+PDE+Y
Sbjct: 1019 LYPDERY 1025


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 1 LWPDEKY 7
L+PDE+Y
Sbjct: 867 LYPDERY 873


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 LWPDEKY 7
L+PDE+Y
Sbjct: 919 LYPDERY 925


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 1 LWPDEKY 7
L+PDE+Y
Sbjct: 472 LFPDERY 478


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 3 PDEKYRE 9
PDE YR+
Sbjct: 208 PDEAYRK 214


>sp|Y516_METST|UPF0173 metal-dependent hydrolase Msp_0516|Methanosphaera stadtmanae

Query: 1 LWPDEKYRE 9
L P E YRE
Sbjct: 225 LMPGEDYRE 233


>sp|ARAT1_THELN|AROMATIC-AMINO-ACID aminotransferase 1|Thermococcus litoralis (strain ATCC 51850

Query: 3 PDEKYREG 10
P+EK REG
Sbjct: 396 PEEKIREG 403


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WPDEKYRE 9
+P EKYR+
Sbjct: 239 FPSEKYRD 246


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 DEKYREG 10
+E+YREG
Sbjct: 252 EEQYREG 258


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 WPDEKYR 8
WP +K+R
Sbjct: 358 WPFDKFR 364


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LWPDEKYR 8
LWP E Y+
Sbjct: 356 LWPQEPYQ 363


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 2 WPDEKYREG 10
WP ++Y +G
Sbjct: 54 WPKQRYYQG 62


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WPDEKYREG 10
WP ++Y +G
Sbjct: 54 WPKQRYYQG 62


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 5 EKYREG 10
EKY+EG
Sbjct: 185 EKYKEG 190


>sp|MSRA_METHJ|PEPTIDE methionine sulfoxide reductase MsrA|Methanospirillum hungatei JF-1

Query: 1 LWPDEKYRE 9
WP E+Y +
Sbjct: 135 FWPAEEYHQ 143


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 WPDEKYREG 10
WP ++Y +G
Sbjct: 56 WPKQRYYQG 64


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LWPDEK 6
LW DEK
Sbjct: 149 LWDDEK 154


>sp|RPO1C_METM7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C7 /

Query: 4 DEKYREG 10
D+KY EG
Sbjct: 377 DKKYEEG 383


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LWPDEKY 7
LWP E Y
Sbjct: 356 LWPQEPY 362


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 3 PDEKY 7
PDEKY
Sbjct: 20 PDEKY 24


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 3 PDEKY 7
PDEKY
Sbjct: 20 PDEKY 24


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain ATCC

Query: 2 WPDEKYRE 9
+PDEK+ E
Sbjct: 300 FPDEKHTE 307


>sp|Y582_METMA|UNCHARACTERIZED glycosyltransferase MM_0582|Methanosarcina mazei (strain ATCC

Query: 2 WPDEKYRE 9
+PDEK+ E
Sbjct: 300 FPDEKHAE 307


>sp|TYW31_THEKO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 LWPDEKYRE 9
LW DE Y E
Sbjct: 160 LWVDEAYIE 168


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 WPDEKYREG 10
WP ++Y +G
Sbjct: 56 WPRQRYYQG 64


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 WPDEKYREG 10
WP ++Y +G
Sbjct: 54 WPRQRYYQG 62


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 WPDEKYREG 10
WP ++Y +G
Sbjct: 54 WPRQRYYQG 62


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LWPDEKY 7
+ PDEKY
Sbjct: 228 VLPDEKY 234


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 3 PDEKYREG 10
P+E YR G
Sbjct: 404 PEEPYRHG 411




97|SequenceR|490|481|WELDWLWPDE

>sp|DADD_METST|5'-DEOXYADENOSINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 WELDWLWPDE 10
W D++WP E
Sbjct: 82 WLNDYIWPKE 91


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 ELDWLW 7
E+DWLW
Sbjct: 161 EMDWLW 166


>sp|SPEE_AERPE|POLYAMINE aminopropyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WELDWLWPD 9
W L+WL PD
Sbjct: 15 WFLEWLTPD 23


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 WELDWLWPDE 10
WEL L PDE
Sbjct: 436 WELFSLLPDE 445


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 1 WELDW 5
WE+DW
Sbjct: 769 WEIDW 773


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WELDWLWP 8
WE+DW P
Sbjct: 999 WEIDWDGP 1006


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ELDWLW 7
++DWLW
Sbjct: 170 KIDWLW 175


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 WELDW 5
WE+DW
Sbjct: 770 WEIDW 774


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 1 WELDWLWPDE 10
+EL W PDE
Sbjct: 288 YELKWREPDE 297


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 1 WELDWLWPDE 10
W D +WP E
Sbjct: 80 WLQDHIWPKE 89


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WELDWLWPDE 10
+EL W PDE
Sbjct: 288 YELKWREPDE 297


>sp|FEN_THEKO|FLAP endonuclease 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WELDWLWPDE 10
+EL W PDE
Sbjct: 288 YELKWREPDE 297


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WELDWLWP 8
WE+DW P
Sbjct: 1006 WEIDWNGP 1013


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 WELDW 5
WE+DW
Sbjct: 772 WEIDW 776


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 WELDW 5
WE+DW
Sbjct: 772 WEIDW 776


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 WELDW 5
WE+DW
Sbjct: 773 WEIDW 777


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 WELDW 5
WE+DW
Sbjct: 774 WEIDW 778


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 WELDW 5
WE+DW
Sbjct: 773 WEIDW 777


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 3 LDWLWPDE 10
+DWL P+E
Sbjct: 560 VDWLGPEE 567


>sp|HICDH_PYRHO|ISOCITRATE/HOMOISOCITRATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WELDWLWPDE 10
+E+D +W DE
Sbjct: 325 YEIDEVWRDE 334


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 WELDW 5
WE+DW
Sbjct: 773 WEIDW 777


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 WELDW 5
WE+DW
Sbjct: 773 WEIDW 777


>sp|FEN_METKA|FLAP endonuclease 1|Methanopyrus kandleri (strain AV19 /

Query: 1 WELDWLWPDE 10
+ELDW PDE
Sbjct: 294 YELDWDEPDE 303


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 WELDWLWPD 9
+EL W+ PD
Sbjct: 289 YELKWIKPD 297


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 WELDWLWPDE 10
W L+W P E
Sbjct: 6 WHLEWQTPQE 15


>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DWLWPDE 10
D+LW DE
Sbjct: 212 DYLWGDE 218


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 WELDW 5
W LDW
Sbjct: 377 WNLDW 381


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 1 WELDWLWPDE 10
++L+W PDE
Sbjct: 296 YKLEWRAPDE 305


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 5 WLWPD 9
W WPD
Sbjct: 38 WGWPD 42


>sp|FEN_HYPBU|FLAP endonuclease 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 WELDWLWPDE 10
++L+W PDE
Sbjct: 295 YKLEWREPDE 304


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 4 DWLWP 8
DWL+P
Sbjct: 315 DWLYP 319


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DWLWP 8
DWL+P
Sbjct: 365 DWLYP 369


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 DWLWP 8
DWL+P
Sbjct: 313 DWLYP 317


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 WELDW 5
W++DW
Sbjct: 761 WKIDW 765


>sp|RISC_METJA|RIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELDWL 6
ELDWL
Sbjct: 110 ELDWL 114


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 4 DWLWP 8
DWL+P
Sbjct: 307 DWLYP 311


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 4 DWLWP 8
DWL+P
Sbjct: 315 DWLYP 319


>sp|FEN_METPE|FLAP endonuclease 1|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 LDWLWPDE 10
LDW PD+
Sbjct: 288 LDWQPPDQ 295


>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 1 WELDWLWPDE 10
++L+W PDE
Sbjct: 288 YKLEWKLPDE 297


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 WELDW 5
W++DW
Sbjct: 762 WKIDW 766


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19

Query: 3 LDWLWPD 9
+DWL PD
Sbjct: 44 VDWLLPD 50


>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 4 DWLWP 8
DWL+P
Sbjct: 316 DWLYP 320


>sp|FEN_PYRHO|FLAP endonuclease 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WELDWLWPDE 10
+ L W PDE
Sbjct: 288 YSLSWKEPDE 297


>sp|Y433_METTH|UPF0201 protein MTH_433|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LDWLWPD 9
+DWL PD
Sbjct: 117 IDWLAPD 123


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 WELDW 5
W++DW
Sbjct: 759 WKIDW 763


>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain

Query: 1 WELDWL 6
WE+ W+
Sbjct: 57 WEIPWI 62


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 4 DWLWP 8
DWL+P
Sbjct: 315 DWLYP 319


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 1 WELDWLWPDE 10
+EL W PD+
Sbjct: 293 YELTWKEPDK 302




98|SequenceR|495|486|FEQLDWELDW

>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 EQLDWELDW 10
EQ W++DW
Sbjct: 758 EQYGWKIDW 766


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 2 EQLDWELDW 10
E+ WE+DW
Sbjct: 765 EEHGWEIDW 773


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 EQLDWELDW 10
E+ WE+DW
Sbjct: 769 EEHGWEIDW 777


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 6 WELDW 10
WE+DW
Sbjct: 772 WEIDW 776


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 6 WELDW 10
WE+DW
Sbjct: 770 WEIDW 774


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 6 WELDW 10
WE+DW
Sbjct: 772 WEIDW 776


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 6 WELDW 10
WE+DW
Sbjct: 773 WEIDW 777


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 6 WELDW 10
WE+DW
Sbjct: 774 WEIDW 778


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 6 WELDW 10
WE+DW
Sbjct: 773 WEIDW 777


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 6 WELDW 10
WE+DW
Sbjct: 773 WEIDW 777


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 2 EQLDWELD 9
E +DW+LD
Sbjct: 425 ENVDWKLD 432


>sp|PDAD_METJA|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FEQLDWELD 9
FE WELD
Sbjct: 131 FEMRGWELD 139


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 WELDW 10
WE+DW
Sbjct: 999 WEIDW 1003


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 QLDWELDW 10
+L W +DW
Sbjct: 213 KLTWRVDW 220


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FEQLDWEL 8
FEQL W L
Sbjct: 492 FEQLSWLL 499


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 3 QLDWELDW 10
+L W +DW
Sbjct: 213 KLTWRVDW 220


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 QLDWELDW 10
+L W +DW
Sbjct: 209 KLTWRVDW 216


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 2 EQLDWELDW 10
E+ W++DW
Sbjct: 755 EKHGWKIDW 763


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 QLDWELDW 10
+L W +DW
Sbjct: 213 KLTWRVDW 220


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 WELDW 10
WE+DW
Sbjct: 1006 WEIDW 1010


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain

Query: 1 FEQLDWELD 9
FE+L+ ELD
Sbjct: 11 FEELEGELD 19


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FEQLDWE 7
+Q+DWE
Sbjct: 74 LDQIDWE 80


>sp|PDAD_METVS|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FEQLDWELD 9
FE WE+D
Sbjct: 130 FEMRGWEID 138


>sp|PDAD_METMP|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FEQLDWELD 9
FE WE+D
Sbjct: 130 FEMRGWEID 138


>sp|PDAD_METM7|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain C7 /

Query: 1 FEQLDWELD 9
FE WE+D
Sbjct: 130 FEMRGWEID 138


>sp|PDAD_METM6|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain C6 /

Query: 1 FEQLDWELD 9
FE WE+D
Sbjct: 130 FEMRGWEID 138


>sp|PDAD_METM5|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus maripaludis (strain C5 /

Query: 1 FEQLDWELD 9
FE WE+D
Sbjct: 130 FEMRGWEID 138


>sp|PDAD_META3|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FEQLDWELD 9
FE WE+D
Sbjct: 131 FEMRGWEID 139


>sp|HEM3_METAC|PROBABLE porphobilinogen deaminase|Methanosarcina acetivorans (strain ATCC

Query: 1 FEQLDWELD 9
E++ WE+D
Sbjct: 168 LERMGWEID 176


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 EQLDWELDW 10
E++DW DW
Sbjct: 551 EKIDWYDDW 559


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 6 WELDW 10
W++DW
Sbjct: 761 WKIDW 765


>sp|NTPPA_THEGJ|DTTP/UTP pyrophosphatase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FEQLDWELDW 10
F +LD EL W
Sbjct: 120 FRELDDELIW 129


>sp|RRP4_NITMS|EXOSOME complex component Rrp4|Nitrosopumilus maritimus (strain SCM1)

Query: 4 LDWELD 9
L WELD
Sbjct: 74 LSWELD 79


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QLDWELDW 10
+L W +DW
Sbjct: 207 KLTWRVDW 214


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 DWELD 9
DWE+D
Sbjct: 253 DWEID 257


>sp|SECD_METJA|PROTEIN-EXPORT membrane protein SecD|Methanocaldococcus jannaschii (strain ATCC

Query: 4 LDWELD 9
+DW+LD
Sbjct: 292 IDWKLD 297


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 FEQLDW 6
FEQL W
Sbjct: 500 FEQLPW 505


>sp|Y201_METJA|UNCHARACTERIZED protein MJ0201|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LDWELDW 10
LDW+L W
Sbjct: 50 LDWKLVW 56


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 3 QLDWELDW 10
+L W +DW
Sbjct: 212 KLPWRVDW 219


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 QLDWELDW 10
+L W +DW
Sbjct: 212 KLPWRVDW 219


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EQLDWELD 9
E L W+LD
Sbjct: 548 ENLSWKLD 555


>sp|FEN_METKA|FLAP endonuclease 1|Methanopyrus kandleri (strain AV19 /

Query: 5 DWELDW 10
D+ELDW
Sbjct: 293 DYELDW 298


>sp|GUAAB_NATPD|GMP synthase [glutamine-hydrolyzing] subunit B|Natronomonas pharaonis

Query: 2 EQLDWE 7
++LDWE
Sbjct: 266 QELDWE 271


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EQLDWELDW 10
EQ+ E+DW
Sbjct: 588 EQVYGEIDW 596


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 2 EQLDWELD 9
EQLD +LD
Sbjct: 216 EQLDLDLD 223




99|SequenceR|500|491|AKKQKFEQLD

>sp|HIS5_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 1 AKKQKFEQL 9
A+K+KFE L
Sbjct: 57 ARKEKFEVL 65


>sp|KHSE_PYRAB|HOMOSERINE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 AKKQKFEQL 9
A K+KFE+L
Sbjct: 268 AMKEKFEEL 276


>sp|RS8_METTL|SMALL ribosomal subunit protein uS8|Methanothermococcus

Query: 2 KKQKFEQLD 10
KKQ+FE+ +
Sbjct: 82 KKQEFEKFE 90


>sp|CAS5_ARCFU|CRISPR-ASSOCIATED protein Cas5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AKKQKFEQLD 10
+KK KFEQ++
Sbjct: 184 SKKAKFEQIN 193


>sp|IF2P_HALMA|PROBABLE translation initiation factor IF-2|Haloarcula marismortui (strain

Query: 3 KQKFEQLD 10
+Q+FEQ+D
Sbjct: 301 EQEFEQVD 308




100|SequenceR|505|496|KKVKKAKKQK

>sp|FLAK_METMP|PREFLAGELLIN peptidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KVKKAKKQK 10
KVK AK+QK
Sbjct: 159 KVKVAKEQK 167




101|SequenceR|510|501|ATAPEKKVKK

>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 TAPEKKVKK 10
TAP KK++K
Sbjct: 54 TAPSKKIEK 62


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 4 PEKKVKK 10
PEK VKK
Sbjct: 283 PEKHVKK 289


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 ATAPEKKVKK 10
ATAPE+ K+
Sbjct: 520 ATAPERTFKQ 529




102|SequenceR|515|506|IPLKSATAPE

>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IPLKSATAPE 10
IP++ +T PE
Sbjct: 338 IPIQDSTVPE 347


>sp|GFCR_HALSA|TRANSCRIPTIONAL regulator GfcR|Halobacterium salinarum (strain ATCC 700922

Query: 1 IPLKSATAPE 10
+PL +ATA E
Sbjct: 103 VPLATATANE 112


>sp|GFCR_HALS3|TRANSCRIPTIONAL regulator GfcR|Halobacterium salinarum (strain ATCC 29341

Query: 1 IPLKSATAPE 10
+PL +ATA E
Sbjct: 103 VPLATATANE 112


>sp|FAU1_PYRAR|PROBABLE ribonuclease FAU-1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PLKSATAPE 10
PLK APE
Sbjct: 136 PLKGVAAPE 144


>sp|PYRE_HALSA|OROTATE phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 IPLKSATAPE 10
+PL +ATA E
Sbjct: 71 VPLAAATATE 80


>sp|Y337_METJA|UNCHARACTERIZED protein MJ0337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IPLKSATAP 9
+P+K+ T+P
Sbjct: 64 VPIKTTTSP 72




103|SequenceR|520|511|AGAGEIPLKS

>sp|THII_DESA1|TRNA sulfurtransferase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 AGEIPLKS 10
AGEIPLKS
Sbjct: 9 AGEIPLKS 16


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AGAGEIPLK 9
A GEIP K
Sbjct: 582 AATGEIPYK 590


>sp|AROK_METM5|SHIKIMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 3 AGEIPLKS 10
+G+IP+KS
Sbjct: 82 SGDIPIKS 89


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 2 GAGEIPL 8
GAGE+P+
Sbjct: 228 GAGEVPV 234


>sp|AROK_METM7|SHIKIMATE kinase|Methanococcus maripaludis (strain C7 /

Query: 3 AGEIPLKS 10
+G+IP+KS
Sbjct: 82 SGDIPVKS 89


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AGAGEIPLKS 10
AG G PL+S
Sbjct: 128 AGLGTAPLRS 137


>sp|RS3A_METTP|SMALL ribosomal subunit protein eS1|Methanothrix thermoacetophila (strain

Query: 1 AGAGEIP 7
AG GE+P
Sbjct: 191 AGPGEVP 197


>sp|AROK_METM6|SHIKIMATE kinase|Methanococcus maripaludis (strain C6 /

Query: 4 GEIPLKS 10
G+IP+KS
Sbjct: 83 GDIPIKS 89


>sp|AROK_METMP|SHIKIMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 4 GEIPLKS 10
G+IP+KS
Sbjct: 83 GDIPIKS 89




104|SequenceR|525|516|MPDGPAGAGE

>sp|KCY_THESM|CYTIDYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 PDGPAGAG 9
PDG AG+G
Sbjct: 179 PDGDAGSG 186


>sp|RS7_HALMO|SMALL ribosomal subunit protein uS7|Halococcus morrhuae (Micrococcus

Query: 2 PDGPAGAGE 10
PD PAGA E
Sbjct: 9 PDQPAGAEE 17


>sp|MRE11_THEVO|DNA double-strand break repair protein|Thermoplasma volcanium (strain

Query: 1 MPDGPAGAGE 10
MP+ P+G+ E
Sbjct: 321 MPNVPSGSSE 330


>sp|WTPC_METJA|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Methanocaldococcus jannaschii

Query: 4 GPAGAGE 10
GP+GAG+
Sbjct: 32 GPSGAGK 38


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PDGPAGA 8
PD P GA
Sbjct: 180 PDNPTGA 186


>sp|WTPC_PYRAB|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus abyssi (strain GE5 /

Query: 4 GPAGAGE 10
GP+GAG+
Sbjct: 33 GPSGAGK 39


>sp|RL14_HYPBU|LARGE ribosomal subunit protein uL14|Hyperthermus butylicus (strain

Query: 1 MPDGPAGAG 9
MP G AGAG
Sbjct: 1 MPKGAAGAG 9


>sp|RFCS_METTH|REPLICATION factor C small subunit|Methanothermobacter thermautotrophicus

Query: 1 MPDGPAGAGE 10
M GPAG G+
Sbjct: 43 MFTGPAGVGK 52


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 MPDGPAGAGE 10
M DGP GA E
Sbjct: 482 MSDGPIGAIE 491


>sp|WTPC_PYRFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus furiosus (strain ATCC

Query: 4 GPAGAGE 10
GP+GAG+
Sbjct: 33 GPSGAGK 39


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DGPAGAG 9
DGP G G
Sbjct: 169 DGPPGVG 175


>sp|RFCS_METS3|REPLICATION factor C small subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 MPDGPAGAGE 10
M GPAG G+
Sbjct: 40 MFTGPAGVGK 49


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus

Query: 4 GPAGAGE 10
GP+GAG+
Sbjct: 38 GPSGAGK 44


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GPAGAGE 10
GPAG G+
Sbjct: 586 GPAGTGK 592


>sp|RFCS_PICTO|REPLICATION factor C small subunit|Picrophilus torridus (strain ATCC 700027

Query: 4 GPAGAGE 10
GPAG G+
Sbjct: 43 GPAGTGK 49


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 4 GPAGAGE 10
GPAG G+
Sbjct: 58 GPAGTGK 64


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 4 GPAGAGE 10
GPAG G+
Sbjct: 51 GPAGVGK 57


>sp|RS13_SULAC|SMALL ribosomal subunit protein uS13|Sulfolobus acidocaldarius (strain

Query: 2 PDGPAGAGE 10
P GPA GE
Sbjct: 159 PAGPAEGGE 167


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 4 GPAGAGE 10
GPAG G+
Sbjct: 50 GPAGCGK 56


>sp|DHQS_METLZ|3-DEHYDROQUINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PDGPA 6
PDGPA
Sbjct: 147 PDGPA 151


>sp|BACS1_HALSA|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 700922

Query: 4 GPAGAGE 10
GPAG GE
Sbjct: 181 GPAGIGE 187


>sp|BACS1_HALS3|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 29341

Query: 4 GPAGAGE 10
GPAG GE
Sbjct: 181 GPAGIGE 187


>sp|RFCS_HALMA|REPLICATION factor C small subunit|Haloarcula marismortui (strain ATCC 43049

Query: 4 GPAGAGE 10
GPAG G+
Sbjct: 54 GPAGTGK 60


>sp|CYSC_ARCFU|PROBABLE adenylyl-sulfate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GPAGAGE 10
GP+GAG+
Sbjct: 9 GPSGAGK 15


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 4 GPAGAGE 10
GPAG G+
Sbjct: 58 GPAGTGK 64


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 1 MPDGPAGAGE 10
+P+GP G+G
Sbjct: 140 IPNGPDGSGR 149


>sp|CYSC_PYRAB|PROBABLE adenylyl-sulfate kinase|Pyrococcus abyssi (strain GE5 /

Query: 4 GPAGAGE 10
GP+GAG+
Sbjct: 10 GPSGAGK 16


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 1 MPDGPAGAGE 10
+P+GP G+G
Sbjct: 140 IPNGPDGSGR 149


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 4 GPAGAGE 10
GPAG G+
Sbjct: 50 GPAGVGK 56


>sp|WTPC_ARCFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Archaeoglobus fulgidus (strain

Query: 4 GPAGAGE 10
GP GAG+
Sbjct: 31 GPTGAGK 37


>sp|DNAG_NATPD|DNA primase DnaG|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DGPAGAG 9
DGPA AG
Sbjct: 395 DGPAAAG 401


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 2 PDGPAGAGE 10
P G AGAGE
Sbjct: 630 PAGDAGAGE 638


>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 MPDGPAG 7
+PDGP G
Sbjct: 425 VPDGPEG 431




105|SequenceR|530|521|LDEQDMPDGP

>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 1 LDEQDMPDG 9
LDE +PDG
Sbjct: 320 LDEYRLPDG 328


>sp|TFS1_SACS2|TRANSCRIPTION factor S1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LDEQDMPDG 9
L+E++MP G
Sbjct: 58 LEEEEMPSG 66


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 1 LDEQDMPDG 9
LD+ D PDG
Sbjct: 14 LDDTDSPDG 22


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 EQDMPDGP 10
E DMPD P
Sbjct: 285 ELDMPDAP 292


>sp|AMZA_HALWD|ARCHAEMETZINCIN walsbyi (strain DSM 16790

Query: 2 DEQDMPDG 9
+EQ +PDG
Sbjct: 35 EEQSIPDG 42


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 1 LDEQDMPDGP 10
L E+ MP+GP
Sbjct: 557 LLEEPMPEGP 566


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 3 EQDMPDGP 10
E+ MP+GP
Sbjct: 559 EEPMPEGP 566


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LDEQDMPDGP 10
LDE ++PD P
Sbjct: 211 LDELEVPDKP 220


>sp|AOR_THEKO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Thermococcus kodakarensis

Query: 3 EQDMPDGP 10
E+ MP+GP
Sbjct: 557 EEPMPEGP 564


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 3 EQDMPDGP 10
E+ MP+GP
Sbjct: 557 EEPMPEGP 564


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 1 LDEQDMPDG 9
LDE MP G
Sbjct: 311 LDEAGMPPG 319


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 4 QDMPDG 9
Q+MPDG
Sbjct: 88 QEMPDG 93


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LDEQDMPDG 9
L+E D+PDG
Sbjct: 127 LEELDIPDG 135


>sp|KGSDH_HALVD|ALPHA-KETOGLUTARATE semialdehyde dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 LDEQDMPDG 9
LDE +PDG
Sbjct: 191 LDEAGLPDG 199


>sp|TRM1_THEAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma acidophilum

Query: 4 QDMPDGP 10
QDM +GP
Sbjct: 241 QDMDEGP 247


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 4 QDMPDG 9
Q+MPDG
Sbjct: 88 QEMPDG 93


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 DMPDGP 10
DMP GP
Sbjct: 278 DMPTGP 283


>sp|COFC_METKA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 LDEQDMPDG 9
LDE +PDG
Sbjct: 70 LDELPLPDG 78


>sp|AMZA_NATPD|ARCHAEMETZINCIN pharaonis (strain ATCC 35678

Query: 2 DEQDMPDG 9
D Q +PDG
Sbjct: 35 DSQPVPDG 42


>sp|HISX_METKA|HISTIDINOL dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 LDEQDMPDGP 10
L + DMP GP
Sbjct: 228 LTDVDMPAGP 237




106|SequenceR|535|526|ESCPGLDEQD

>sp|Y790_THEKO|UPF0179 protein TK0790|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ESCPGLDEQD 10
E CP LD++D
Sbjct: 96 EDCPDLDKRD 105


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ESCPGLDE 8
+S PGLDE
Sbjct: 44 KSVPGLDE 51


>sp|FEN_METB6|FLAP endonuclease 1|Methanoregula boonei (strain DSM 21154

Query: 1 ESCPGLD 7
E CPG D
Sbjct: 263 EKCPGFD 269


>sp|HMGCS_ARCFU|HYDROXYMETHYLGLUTARYL-COA synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ESCPGLDE 8
+S PG+DE
Sbjct: 41 KSVPGMDE 48


>sp|DNAG_STAMF|DNA primase DnaG|Staphylothermus marinus (strain ATCC 43588

Query: 4 PGLDEQD 10
PG+DE D
Sbjct: 160 PGVDESD 166


>sp|ADHS_HALSA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PGLDEQD 10
PG+DE D
Sbjct: 148 PGVDEHD 154


>sp|IF2G_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 3 CPGLDEQD 10
CP LDE D
Sbjct: 59 CPELDEPD 66




107|SequenceR|540|531|QFEEEESCPG

>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 2 FEEEESCPG 10
FEE E PG
Sbjct: 81 FEESEESPG 89


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QFEEEESCP 9
+F+E +CP
Sbjct: 403 EFDENSTCP 411


>sp|TF2B_PYROC|TRANSCRIPTION initiation factor IIB|Pyrodictium occultum

Query: 3 EEEESCP 9
E+EE CP
Sbjct: 12 EKEEGCP 18


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 3 EEEESCP 9
E +ESCP
Sbjct: 678 EGQESCP 684




108|SequenceR|545|536|AMVDQQFEEE

>sp|TRPB_PYRAR|TRYPTOPHAN synthase beta chain|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 AMVDQQFEEE 10
A++DQ+F E
Sbjct: 39 ALIDQEFSAE 48


>sp|TRPB_PYRAE|TRYPTOPHAN synthase beta chain|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AMVDQQFEEE 10
A++DQ+F E
Sbjct: 39 ALIDQEFTAE 48


>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AMVDQQFEEE 10
A++DQ+F E
Sbjct: 39 ALIDQEFTAE 48


>sp|RTCB_METTH|TRNA-SPLICING ligase RtcB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 MVDQQFEEE 10
MVD+ F+EE
Sbjct: 211 MVDEIFDEE 219


>sp|GATE_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Haloarcula marismortui (strain ATCC

Query: 1 AMVDQQFE 8
+MVD++FE
Sbjct: 67 SMVDREFE 74


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 3 VDQQFEE 9
+D+QFEE
Sbjct: 580 IDEQFEE 586




109|SequenceR|550|541|QLCARAMVDQ

>sp|COBY_METJA|ADENOSYLCOBINAMIDE-PHOSPHATE guanylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QLCARAMVD 9
+LC R ++D
Sbjct: 23 KLCGRCLID 31




110|SequenceR|555|546|TGKLKQLCAR

>sp|THIE_THEAC|THIAMINE-PHOSPHATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 KLKQLCAR 10
K+KQ+C R
Sbjct: 56 KVKQICNR 63


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 2 GKLKQLCAR 10
GKLK+L +R
Sbjct: 454 GKLKELTSR 462


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 TGKLKQLCAR 10
TG+L +LC +
Sbjct: 374 TGELIELCVK 383




111|SequenceR|560|551|PLLETTGKLK

>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PLLETTGKLK 10
P+L+TTG+ K
Sbjct: 176 PILKTTGEFK 185


>sp|RL10_IGNH4|LARGE ribosomal subunit protein uL10|Ignicoccus hospitalis (strain KIN4/I

Query: 1 PLLETTGKLK 10
P+L T GKLK
Sbjct: 143 PILSTFGKLK 152


>sp|MVK_PYRAB|MEVALONATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 PLLETTGKL 9
P+LE+ GKL
Sbjct: 220 PILESMGKL 228


>sp|MVK_PYRHO|MEVALONATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PLLETTGKL 9
P+LE GKL
Sbjct: 220 PILEAMGKL 228


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PLLETTGKLK 10
PLL+ TG+ K
Sbjct: 176 PLLKITGEFK 185


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 2 LLETTGKLK 10
LL +TGK+K
Sbjct: 210 LLRSTGKVK 218


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 2 LLETTGKLK 10
LL +TGK+K
Sbjct: 210 LLRSTGKVK 218


>sp|RL37A_SULTO|LARGE ribosomal subunit protein eL43|Sulfurisphaera tokodaii (strain

Query: 1 PLLETTGKL 9
P+ +TTGK+
Sbjct: 37 PVCKTTGKV 45


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 2 LLETTGKLK 10
+ +TTGKL+
Sbjct: 1 MTDTTGKLR 9


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 2 LLETTGKLK 10
+ +TTGKL+
Sbjct: 1 MTDTTGKLR 9


>sp|RL10_SULAC|LARGE ribosomal subunit protein uL10|Sulfolobus acidocaldarius (strain

Query: 1 PLLETTGKLK 10
P+L GKLK
Sbjct: 137 PMLSVFGKLK 146


>sp|RL10_SACS2|LARGE ribosomal subunit protein uL10|Saccharolobus solfataricus (strain

Query: 1 PLLETTGKLK 10
P+L GKLK
Sbjct: 138 PILSVFGKLK 147


>sp|RL10_SACI6|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 PLLETTGKLK 10
P+L GKLK
Sbjct: 138 PILSVFGKLK 147


>sp|RL10_SACI4|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 PLLETTGKLK 10
P+L GKLK
Sbjct: 138 PILSVFGKLK 147


>sp|RL10_SACI3|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 PLLETTGKLK 10
P+L GKLK
Sbjct: 138 PILSVFGKLK 147


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM 6242

Query: 2 LLETTGKL 9
L+ETTG L
Sbjct: 233 LMETTGNL 240


>sp|RL10_SACI7|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 PLLETTGKLK 10
P+L GKLK
Sbjct: 138 PILSVFGKLK 147


>sp|RL10_SACI2|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 PLLETTGKLK 10
P+L GKLK
Sbjct: 138 PILSVFGKLK 147


>sp|RL10_SACI1|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 PLLETTGKLK 10
P+L GKLK
Sbjct: 138 PILSVFGKLK 147




112|SequenceR|565|556|HQPRKPLLET

>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 HQPRKPLLET 10
H P++PL++T
Sbjct: 696 HYPQRPLVQT 705


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 HQPRKPLLET 10
H P++PL++T
Sbjct: 696 HYPQRPLVQT 705


>sp|MTRB_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 3 PRKPLLET 10
P KPLL T
Sbjct: 56 PSKPLLNT 63


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 HQPRKPLLET 10
H P+ PL++T
Sbjct: 694 HYPQMPLVQT 703


>sp|MTRA_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 HQPRKPLLE 9
H P KP+L+
Sbjct: 35 HLPGKPILD 43


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 4 RKPLLET 10
+KPL+ET
Sbjct: 432 KKPLMET 438


>sp|MTRA_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina acetivorans (strain

Query: 1 HQPRKPLLE 9
H P KP+L+
Sbjct: 35 HLPGKPVLD 43


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 RKPLLET 10
+KPL+ET
Sbjct: 432 KKPLMET 438


>sp|CSA1_THETK|CRISPR-ASSOCIATED exonuclease Csa1|Thermoproteus tenax (strain ATCC 35583

Query: 2 QPRKPLLE 9
QP KPL E
Sbjct: 72 QPTKPLAE 79




113|SequenceR|570|561|PHGPLHQPRK

>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 124 PNGPLH 129


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 133 PNGPLH 138


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 125 PNGPLH 130


>sp|SYR_METKA|ARGININE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 141 PNGPLH 146


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 126 PNGPLH 131


>sp|SYR_METHJ|ARGININE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 119 PNGPLH 124


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 123 PNGPLH 128


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 125 PNGPLH 130


>sp|SYR_METAC|ARGININE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 123 PNGPLH 128


>sp|SYR_META3|ARGININE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 126 PNGPLH 131


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 118 PNGPLH 123


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 121 PNGPLH 126


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PHGPLHQPR 9
P GPLH R
Sbjct: 121 PTGPLHVGR 129


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 124 PNGPLH 129


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PHGPLH 6
P GPLH
Sbjct: 121 PDGPLH 126


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PHGPLH 6
P GPLH
Sbjct: 115 PDGPLH 120


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PHGPLHQPR 9
P GPLH R
Sbjct: 119 PTGPLHIGR 127


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 PHGPLH 6
P GPLH
Sbjct: 102 PSGPLH 107


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 PHGPLHQPRK 10
P PL+ PRK
Sbjct: 597 PFRPLYTPRK 606


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PHGPLH 6
P GPLH
Sbjct: 102 PSGPLH 107


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 PHGPLH 6
P GPLH
Sbjct: 102 PSGPLH 107


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 PHGPLH 6
P GPLH
Sbjct: 102 PSGPLH 107


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PHGPLHQP 8
PH LH+P
Sbjct: 492 PHIELHRP 499


>sp|ILVC_METKA|KETOL-ACID reductoisomerase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 1 PHGPLHQPRK 10
P GP H RK
Sbjct: 130 PKGPGHMVRK 139


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PHGPLH 6
P GPLH
Sbjct: 102 PSGPLH 107


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PHGPLH 6
P+GPLH
Sbjct: 118 PNGPLH 123


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PHGPLHQPR 9
P+ PL+ PR
Sbjct: 592 PNRPLYMPR 600


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PHGPLH 6
P GPLH
Sbjct: 100 PSGPLH 105


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 PHGPLH 6
P GPLH
Sbjct: 105 PSGPLH 110


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PHGPLHQPR 9
P+ PL+ PR
Sbjct: 592 PNRPLYMPR 600


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PHGPLH 6
P GPLH
Sbjct: 105 PSGPLH 110


>sp|MPTE_METTH|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 PHGPLH 6
PHG LH
Sbjct: 149 PHGCLH 154


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PHGPLH 6
P GPLH
Sbjct: 106 PDGPLH 111


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PHGPLH 6
P GPLH
Sbjct: 108 PSGPLH 113


>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PHGPLH 6
P GPLH
Sbjct: 110 PDGPLH 115


>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PHGPLH 6
P GPLH
Sbjct: 108 PDGPLH 113


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PHGPLH 6
P GPLH
Sbjct: 106 PSGPLH 111


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PHGPLH 6
P GPLH
Sbjct: 107 PSGPLH 112


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PHGPLH 6
P GPLH
Sbjct: 104 PSGPLH 109


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PHGPLH 6
P GPLH
Sbjct: 110 PSGPLH 115


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PHGPLH 6
P GPLH
Sbjct: 109 PSGPLH 114


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PHGPLH 6
P GPLH
Sbjct: 109 PSGPLH 114


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 PHGPLH 6
P GPLH
Sbjct: 110 PSGPLH 115


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PHGPLH 6
P GPLH
Sbjct: 104 PSGPLH 109


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 3 GPLHQPRK 10
G +H+PRK
Sbjct: 2 GKIHRPRK 9


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 PHGPLH 6
P GPLH
Sbjct: 104 PSGPLH 109




114|SequenceR|575|566|KRYWGPHGPL

>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KRYWGPHGP 9
K ++GPH P
Sbjct: 179 KVFFGPHSP 187


>sp|Y920_METJA|UNCHARACTERIZED protein MJ0920|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRYWG 5
KRYWG
Sbjct: 45 KRYWG 49


>sp|RL4_SULTO|LARGE ribosomal subunit protein uL4|Sulfurisphaera tokodaii (strain DSM

Query: 1 KRYWGPHGPL 10
+RY P GPL
Sbjct: 194 RRYKEPKGPL 203


>sp|DADD_METMA|5'-DEOXYADENOSINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KRYWGPHGP 9
K +GPH P
Sbjct: 178 KTMYGPHAP 186


>sp|DADD_METBF|5'-DEOXYADENOSINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KRYWGPHGP 9
K +GPH P
Sbjct: 178 KTMYGPHAP 186


>sp|DADD_METAC|5'-DEOXYADENOSINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KRYWGPHGP 9
K +GPH P
Sbjct: 178 KTMYGPHAP 186


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 6 PHGPL 10
PHGPL
Sbjct: 120 PHGPL 124


>sp|AROA_HALS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halobacterium salinarum (strain ATCC

Query: 6 PHGPL 10
PHGPL
Sbjct: 120 PHGPL 124


>sp|AROA_HALSA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halobacterium salinarum (strain ATCC

Query: 6 PHGPL 10
PHGPL
Sbjct: 129 PHGPL 133


>sp|LYSY_PYRFU|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 KRYWGPH 7
++Y+GPH
Sbjct: 104 EKYYGPH 110


>sp|KDPC_HALSA|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 700922

Query: 4 WGPHGPL 10
WGP PL
Sbjct: 93 WGPTNPL 99


>sp|KDPC_HALS3|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 29341

Query: 4 WGPHGPL 10
WGP PL
Sbjct: 93 WGPTNPL 99


>sp|TSR3_METTH|16S rRNA aminocarboxypropyltransferase|Methanothermobacter

Query: 4 WGPH 7
WGPH
Sbjct: 135 WGPH 138


>sp|TSR3_METST|16S rRNA aminocarboxypropyltransferase|Methanosphaera stadtmanae

Query: 4 WGPH 7
WGPH
Sbjct: 136 WGPH 139


>sp|OTC_IGNH4|ORNITHINE carbamoyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KRYWG 5
+RYWG
Sbjct: 37 RRYWG 41


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 4 WGPHGP 9
+GPH P
Sbjct: 181 YGPHAP 186


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 KRYWGPH 7
+ YWGP+
Sbjct: 1063 REYWGPN 1069


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 RYWGPHGPL 10
RY PHG L
Sbjct: 260 RYMTPHGTL 268


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 RYWGPHGPL 10
RYWG P+
Sbjct: 453 RYWGTPLPI 461


>sp|KCY_THEKO|CYTIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YWGPHG 8
+WGP G
Sbjct: 160 HWGPDG 165


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 420 QRYWGTPIPI 429


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 3 YWGPHG 8
YWGP G
Sbjct: 962 YWGPTG 967


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RYWGPHGPL 10
++ PHGP+
Sbjct: 14 KFETPHGPI 22


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KRYWG 5
K+YWG
Sbjct: 485 KKYWG 489


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 456 QRYWGIPLPI 465


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 464 QRYWGIPLPI 473


>sp|HIS4_PYRFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrococcus furiosus (strain ATCC

Query: 1 KRYWG 5
KR+WG
Sbjct: 178 KRFWG 182


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 KRYWG 5
+RYWG
Sbjct: 622 ERYWG 626


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 461 QRYWGIPVPI 470


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 460 QRYWGIPIPI 469


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 469 QRYWGIPLPI 478


>sp|SURE2_PYRAE|5'-NUCLEOTIDASE SurE 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 GPHGPL 10
GPH PL
Sbjct: 10 GPHSPL 15


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 2 RYWGPHGP 9
R W PH P
Sbjct: 2 RSWFPHAP 9


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YWGPH 7
YWGP+
Sbjct: 401 YWGPN 405


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 459 QRYWGIPIPI 468


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KRYWG 5
+RYWG
Sbjct: 457 QRYWG 461


>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 WGPH 7
WGPH
Sbjct: 364 WGPH 367


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRYWG 5
+RYWG
Sbjct: 464 QRYWG 468


>sp|RL4_METTH|LARGE ribosomal subunit protein uL4|Methanothermobacter

Query: 1 KRYWGPHGPL 10
++Y P GPL
Sbjct: 188 RKYRTPRGPL 197


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 449 QRYWGIPIPI 458


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 507 QRYWGIPIPI 516


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KRYWG 5
+RYWG
Sbjct: 457 QRYWG 461


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KRYWG 5
+RYWG
Sbjct: 457 QRYWG 461


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KRYWG 5
+RYWG
Sbjct: 457 QRYWG 461


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 449 QRYWGIPIPI 458


>sp|FLPA_PYRAB|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 RYWGPH 7
R W PH
Sbjct: 49 RIWNPH 54


>sp|Y692_ARCFU|UNCHARACTERIZED protein AF_0692|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YWGP 6
YWGP
Sbjct: 84 YWGP 87


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KRYWG 5
+RYWG
Sbjct: 453 QRYWG 457


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KRYWG 5
+RYWG
Sbjct: 456 QRYWG 460


>sp|FLPA_PYRFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 2 RYWGPH 7
R W PH
Sbjct: 49 RIWNPH 54


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 KRYWG 5
+RYWG
Sbjct: 453 QRYWG 457


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 464 QRYWGIPLPI 473


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 464 QRYWGIPLPI 473


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KRYWG 5
+RYWG
Sbjct: 451 QRYWG 455


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 453 QRYWGIPIPI 462


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 4 WGPHG 8
WG HG
Sbjct: 127 WGSHG 131


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 464 QRYWGIPLPI 473


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 464 QRYWGIPLPI 473


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KRYWGPHGPL 10
+RYWG P+
Sbjct: 458 QRYWGIPLPI 467




115|SequenceR|580|571|LRPCLKRYWG

>sp|TRM1_PYRNV|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum neutrophilum

Query: 2 RPCLKRYW 9
R CL+RYW
Sbjct: 165 RKCLRRYW 172


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 1 LRPCLKRY 8
++PCL++Y
Sbjct: 164 IKPCLRKY 171


>sp|Y920_METJA|UNCHARACTERIZED protein MJ0920|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LKRYWG 10
+KRYWG
Sbjct: 44 IKRYWG 49


>sp|DPCKG_METKA|GTP-DEPENDENT dephospho-CoA kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 LRPCLKRYWG 10
LRP L+R WG
Sbjct: 11 LRPELRRPWG 20


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 LRPCLKRYW 9
LRP K YW
Sbjct: 330 LRPGAKYYW 338


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 RPCLKRY 8
+PC KRY
Sbjct: 1057 KPCGKRY 1063


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 3 PCLKRY 8
PCL++Y
Sbjct: 169 PCLRKY 174


>sp|ASPD_METBF|L-ASPARTATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LRPCLKRY 8
L CLKRY
Sbjct: 43 LTTCLKRY 50


>sp|HIS4_PYRFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrococcus furiosus (strain ATCC

Query: 5 LKRYWG 10
+KR+WG
Sbjct: 177 IKRFWG 182


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 2 RPCLKRY 8
R CL+RY
Sbjct: 167 RKCLRRY 173


>sp|SURE_THEPD|5'-NUCLEOTIDASE SurE|Thermofilum pendens (strain DSM 2475

Query: 1 LRPCLKRY 8
+RP LKR+
Sbjct: 182 VRPALKRF 189


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 2 RPCLKRY 8
R CL+RY
Sbjct: 169 RKCLRRY 175


>sp|SELD_METJA|SELENIDE, water dikinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LRPCLKR 7
L PC+KR
Sbjct: 271 LLPCIKR 277


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 RPCLKRYW 9
RP L YW
Sbjct: 105 RPALLSYW 112


>sp|FPOB_METMA|F(420)H(2) dehydrogenase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PCLKRYW 9
P LKR W
Sbjct: 105 PALKRLW 111


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LRPCLKRYWG 10
L P LKR +G
Sbjct: 24 LEPALKRVFG 33




116|SequenceR|585|576|WAPDDLRPCL

>sp|COBQ_METHJ|PROBABLE cobyric acid synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PDDLRP 8
PDD+RP
Sbjct: 181 PDDIRP 186


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain

Query: 1 WAPDDLRPC 9
WA + ++PC
Sbjct: 17 WAIEKIKPC 25


>sp|DPCKG_METBU|GTP-DEPENDENT dephospho-CoA kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PDDLRPCL 10
PD LRP L
Sbjct: 2 PDSLRPLL 9


>sp|RRP41_AERPE|EXOSOME complex component Rrp41|Aeropyrum pernix (strain ATCC 700893

Query: 3 PDDLRP 8
P+DLRP
Sbjct: 23 PEDLRP 28


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 3 PDDLRPCL 10
P D +PC+
Sbjct: 15 PQDAKPCM 22


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 WAPDDLR 7
+ PDDLR
Sbjct: 281 YTPDDLR 287


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 3 PDDLRP 8
PDD++P
Sbjct: 134 PDDIKP 139


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 WAPDDLRPCL 10
+A DD +PC+
Sbjct: 217 FAADDSKPCI 226


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 1 WAPDDLR 7
++PDDLR
Sbjct: 287 YSPDDLR 293


>sp|PELO_METTP|PROTEIN pelota homolog|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 WAPDDLR 7
W PD+L+
Sbjct: 113 WRPDELQ 119


>sp|6PGD_HALVD|6-PHOSPHOGLUCONATE dehydrogenase, NAD(+)-dependent, decarboxylating|Haloferax volcanii

Query: 1 WAPDDLRP 8
WA D+L P
Sbjct: 137 WAYDELTP 144


>sp|Y1555_ARCFU|UNCHARACTERIZED protein AF_1555|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WAPDDLRPCL 10
+AP D R CL
Sbjct: 43 FAPPDQRNCL 52


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 APDDLRP 8
AP+DL P
Sbjct: 204 APEDLEP 210




117|SequenceR|590|581|SPGPTWAPDD

>sp|Y599_METJA|UNCHARACTERIZED protein MJ0599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGPTWAPDD 10
P P W PD+
Sbjct: 11 PYPEWDPDE 19


>sp|CDC6B_HALMA|ORC1-TYPE DNA replication protein 2|Haloarcula marismortui (strain ATCC

Query: 3 GPTWAPDD 10
GP + PDD
Sbjct: 2 GPRFQPDD 9


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 3 GPTWAPD 9
GP W PD
Sbjct: 270 GPLWLPD 276


>sp|PRDPP_METMA|PRENYL-DIPHOSPHATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SPGPTWAPD 9
SPG W P+
Sbjct: 47 SPGKFWFPN 55


>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain

Query: 2 PGPTWAPDD 10
PGPT P +
Sbjct: 13 PGPTMVPPE 21


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PGPTWAPDD 10
P P W PDD
Sbjct: 465 PIPIWTPDD 473


>sp|AROE_SULTO|SHIKIMATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SPGPTWAPDD 10
+P P + PD+
Sbjct: 182 TPNPDFVPDE 191


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 3 GPTWAPDD 10
G W+P+D
Sbjct: 362 GEVWSPED 369


>sp|TF2B7_HALSA|TRANSCRIPTION initiation factor IIB 7|Halobacterium salinarum (strain ATCC

Query: 2 PGPTW 6
PGP W
Sbjct: 62 PGPEW 66


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 PGPTWAPDD 10
PG +WA D
Sbjct: 432 PGASWAEKD 440


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 2 PGPTW 6
PGP W
Sbjct: 48 PGPEW 52


>sp|NREA_HALVD|DNA repair protein NreA|Haloferax volcanii (strain ATCC 29605

Query: 1 SPGPTWAPD 9
+PG W PD
Sbjct: 291 APGSVWNPD 299


>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 3 GPTWAPDD 10
GP W PD+
Sbjct: 16 GPVWHPDE 23


>sp|TF2B2_SACS2|TRANSCRIPTION initiation factor IIB 2|Saccharolobus solfataricus (strain ATCC

Query: 2 PGPTW 6
PGP W
Sbjct: 37 PGPDW 41


>sp|6PGD_HALVD|6-PHOSPHOGLUCONATE dehydrogenase, NAD(+)-dependent, decarboxylating|Haloferax volcanii

Query: 3 GPTWAPDD 10
GP WA D+
Sbjct: 134 GPQWAYDE 141


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PTWAPDD 10
P WA DD
Sbjct: 106 PHWATDD 112


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SPGPTWAP 8
SPGP AP
Sbjct: 518 SPGPLPAP 525


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PTWAPDD 10
P WA DD
Sbjct: 106 PHWATDD 112


>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PGPTWA 7
PG TWA
Sbjct: 291 PGETWA 296


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGPTWA 7
PG TWA
Sbjct: 291 PGETWA 296


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PGPTWA 7
PG TWA
Sbjct: 291 PGETWA 296


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGPTWAPDD 10
P P W P+D
Sbjct: 467 PVPIWTPED 475




118|SequenceR|595|586|QLSLLSPGPT

>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 1 QLSLLSPGP 9
+ + LSPGP
Sbjct: 13 EFNALSPGP 21


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QLSLLSPGP 9
++++L+PGP
Sbjct: 247 RVNILNPGP 255


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QLSLLSPGP 9
++++L+PGP
Sbjct: 247 RVNILNPGP 255


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 QLSLLSPGP 9
++++L+PGP
Sbjct: 247 RVNILNPGP 255


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 QLSLLSPGP 9
++++L+PGP
Sbjct: 247 RVNILNPGP 255


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QLSLLSPGP 9
++++L+PGP
Sbjct: 252 RVNILNPGP 260


>sp|TRPG1_HALMA|ANTHRANILATE synthase component II|Haloarcula marismortui (strain ATCC 43049

Query: 4 LLSPGP 9
+LSPGP
Sbjct: 62 ILSPGP 67




119|SequenceR|600|591|PTVRMQLSLL

>sp|AROD_THEVO|3-DEHYDROQUINATE dehydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PTVRMQLSLL 10
P V M LSLL
Sbjct: 101 PAVDMDLSLL 110




120|SequenceR|605|596|LAMLKPTVRM

>sp|NADE_METKA|NH(3)-DEPENDENT NAD(+) synthetase|Methanopyrus kandleri (strain AV19 /

Query: 2 AMLKPTVRM 10
A LKP VRM
Sbjct: 122 ANLKPRVRM 130


>sp|NADE_ARCFU|NH(3)-DEPENDENT NAD(+) synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AMLKPTVRM 10
A LKP +RM
Sbjct: 107 ANLKPRIRM 115




121|SequenceR|610|601|FGDWTLAMLK

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 GDWTLA 7
GDWTLA
Sbjct: 148 GDWTLA 153


>sp|MSMJL_METJA|LARGE-CONDUCTANCE mechanosensitive channel MscMJLR|Methanocaldococcus jannaschii

Query: 1 FGDWTL 6
FGDW+L
Sbjct: 302 FGDWSL 307


>sp|PYRE_METMP|OROTATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 FGDWTLA 7
FGD+TLA
Sbjct: 25 FGDFTLA 31


>sp|PYRE_METLZ|OROTATE phosphoribosyltransferase|Methanocorpusculum labreanum (strain

Query: 1 FGDWTLA 7
FGD+TLA
Sbjct: 17 FGDFTLA 23


>sp|PYRE_METHJ|OROTATE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 FGDWTLA 7
FGD+TLA
Sbjct: 18 FGDFTLA 24


>sp|MSMJS_METJA|SMALL-CONDUCTANCE mechanosensitive channel MscMJ|Methanocaldococcus jannaschii

Query: 1 FGDWTLAM 8
+GDW+L +
Sbjct: 294 YGDWSLNL 301


>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FGDWTLAML 9
FG+W L ++
Sbjct: 391 FGEWILPLV 399


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 1 FGDWTL 6
FG+WT+
Sbjct: 363 FGEWTI 368


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GDWTLA 7
GDWT A
Sbjct: 121 GDWTRA 126




122|SequenceR|615|606|SYHLPFGDWT

>sp|DGGGP_METMJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 LPFGDW 9
LPFGDW
Sbjct: 216 LPFGDW 221


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HLPFGDW 9
++PFGDW
Sbjct: 458 YVPFGDW 464


>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SYHLPFGDWT 10
SYH FGD T
Sbjct: 199 SYHDKFGDKT 208


>sp|COMD_METMP|SULFOPYRUVATE decarboxylase subunit alpha|Methanococcus maripaludis (strain DSM

Query: 1 SYHLPFGDWT 10
S +P G WT
Sbjct: 107 SAQIPMGQWT 116


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YHLPFGDWT 10
+H PF WT
Sbjct: 167 FHTPFIQWT 175


>sp|Y907_METJA|UNCHARACTERIZED protein MJ0907|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SYHLPFG 7
SY++PFG
Sbjct: 145 SYNIPFG 151


>sp|MSMJL_METJA|LARGE-CONDUCTANCE mechanosensitive channel MscMJLR|Methanocaldococcus jannaschii

Query: 2 YHLPFGDWT 10
Y FGDW+
Sbjct: 298 YFKEFGDWS 306


>sp|Y945_METJA|UNCHARACTERIZED protein MJ0945|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PFGDW 9
PFG+W
Sbjct: 59 PFGEW 63


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SYHLPFGDW 9
SY+ P G W
Sbjct: 331 SYYAPLGVW 339


>sp|ARGD_METTH|ACETYLORNITHINE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 3 HLPFGD 8
H+P+GD
Sbjct: 161 HVPYGD 166


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 HLPFGD 8
H+P+GD
Sbjct: 160 HVPYGD 165


>sp|Y638_METJA|UNCHARACTERIZED protein MJ0638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HLPFGDWT 10
HLPF D T
Sbjct: 95 HLPFKDNT 102


>sp|PYRI_THEKO|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus kodakarensis

Query: 3 HLPFGDW 9
H+P G W
Sbjct: 18 HIPAGKW 24


>sp|PYRI_THEGJ|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus gammatolerans

Query: 3 HLPFGDW 9
H+P G W
Sbjct: 17 HIPAGKW 23


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 4 LPFGDW 9
+PFG W
Sbjct: 218 IPFGRW 223


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SYHLPFGDW 9
+YH G+W
Sbjct: 286 AYHPKLGEW 294


>sp|KAE1_HYPBU|TRNA N6-adenosine threonylcarbamoyltransferase|Hyperthermus butylicus

Query: 1 SYHLPFGDW 9
SYH DW
Sbjct: 307 SYHGAVADW 315


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YHLPFGD 8
Y+L FGD
Sbjct: 257 YYLDFGD 263


>sp|G1PDH_METTH|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 3 HLPFGDW 9
HL GDW
Sbjct: 277 HLHGGDW 283


>sp|VORB_PYRHO|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus horikoshii (strain ATCC

Query: 1 SYHLPFGDWT 10
S P+G WT
Sbjct: 150 SSSTPYGAWT 159


>sp|VORB_PYRFU|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SYHLPFGDWT 10
S P+G WT
Sbjct: 150 SSSTPYGAWT 159


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 1 SYHLPFGDWT 10
S P+G WT
Sbjct: 150 SSSTPYGAWT 159


>sp|Y3509_METJA|UNCHARACTERIZED protein MJECL09|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LPFGDW 9
+PF DW
Sbjct: 24 IPFEDW 29


>sp|QUEC_HALSA|7-CYANO-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SYHLPFGDWT 10
S + PF DW+
Sbjct: 160 SINAPFVDWS 169


>sp|QUEC_HALS3|7-CYANO-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SYHLPFGDWT 10
S + PF DW+
Sbjct: 160 SINAPFVDWS 169


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SYHLPFGDWT 10
S P+G WT
Sbjct: 149 SSSTPYGAWT 158


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SYHLPFGDWT 10
S P+G WT
Sbjct: 149 SSSTPYGAWT 158




123|SequenceR|620|611|WGHRESYHLP

>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 GHRESYHLP 10
GHR+ HLP
Sbjct: 263 GHRDIPHLP 271


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 HRESYHLP 10
HRE ++LP
Sbjct: 1386 HREVFNLP 1393


>sp|ACDD_METMA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina mazei

Query: 1 WGHRESY 7
WG RES+
Sbjct: 355 WGARESW 361


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 WGHRESY 7
WG RES+
Sbjct: 356 WGARESW 362


>sp|ACDD2_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 WGHRESY 7
WG RES+
Sbjct: 355 WGARESW 361


>sp|ACDD1_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 WGHRESY 7
WG RES+
Sbjct: 355 WGARESW 361


>sp|ACDD1_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 WGHRESY 7
WG RES+
Sbjct: 355 WGARESW 361


>sp|GYAR_PYRHO|GLYOXYLATE reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 RESYHL 9
RE+YHL
Sbjct: 216 RETYHL 221


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 WGHRES 6
WG+RE+
Sbjct: 16 WGYREA 21


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 WGHRES 6
WG+RE+
Sbjct: 19 WGYREA 24


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 WGHRES 6
WG+RE+
Sbjct: 22 WGYREA 27


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 ESYHLP 10
E YHLP
Sbjct: 313 EEYHLP 318


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 ESYHLP 10
E YHLP
Sbjct: 313 EEYHLP 318


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 WGHRESYHL 9
WG R ++H+
Sbjct: 212 WGGRINHHM 220


>sp|HIS5_PYRAE|IMIDAZOLE glycerol phosphate synthase subunit|Pyrobaculum aerophilum (strain

Query: 1 WGHRESY 7
WG E+Y
Sbjct: 138 WGENEAY 144




124|SequenceR|625|616|PVLYGWGHRE

>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VLYGWGHRE 10
+L GWG+RE
Sbjct: 18 ILDGWGYRE 26


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 VLYGWGHRE 10
+L GWG+RE
Sbjct: 15 ILDGWGYRE 23


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 2 VLYGWGHRE 10
+L GWG+RE
Sbjct: 12 ILDGWGYRE 20


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 VLYGWGHRE 10
+L GWG+RE
Sbjct: 18 ILDGWGYRE 26


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 5 GWGHRE 10
GWG+RE
Sbjct: 15 GWGYRE 20


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PVLYGWGHR 9
PV+YG+G R
Sbjct: 164 PVVYGFGGR 172


>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 4 YGWGHRE 10
Y WGH +
Sbjct: 335 YNWGHED 341


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LYGWGHRE 10
LY W HR+
Sbjct: 456 LYYWEHRK 463


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LYGWGHRE 10
LY W HR+
Sbjct: 458 LYYWEHRK 465


>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 4 YGWGHRE 10
+GWGH E
Sbjct: 137 FGWGHIE 143


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PVLYGWGH 8
PV+YG+G
Sbjct: 373 PVIYGFGQ 380


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 3 LYGWGHR 9
LY W HR
Sbjct: 456 LYYWEHR 462


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PVLYGWGHRE 10
P+L GW + +
Sbjct: 392 PILPGWANED 401


>sp|Y1507_METJA|UNCHARACTERIZED ABC transporter permease MJ1507|Methanocaldococcus jannaschii

Query: 2 VLYGW 6
V+YGW
Sbjct: 98 VMYGW 102


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 1 PVLYGWGH 8
PV+YG+G
Sbjct: 392 PVIYGFGQ 399


>sp|RL22_PYRFU|LARGE ribosomal subunit protein uL22|Pyrococcus furiosus (strain ATCC

Query: 1 PVLYGWGHR 9
PVL GW R
Sbjct: 123 PVLRGWYPR 131


>sp|COXX1_PICTO|PROTOHEME IX farnesyltransferase 1|Picrophilus torridus (strain ATCC 700027

Query: 1 PVLYGW 6
PVL GW
Sbjct: 156 PVLIGW 161


>sp|PELO_THEPD|PROTEIN pelota homolog|Thermofilum pendens (strain DSM 2475

Query: 2 VLYGWGHRE 10
V+YGW R+
Sbjct: 35 VVYGWTTRQ 43


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 4 YGWG 7
YGWG
Sbjct: 729 YGWG 732


>sp|TRUA_METAC|TRNA pseudouridine synthase A|Methanosarcina acetivorans (strain ATCC

Query: 1 PVLYGWGHRE 10
P ++ W H E
Sbjct: 86 PAIWAWAHAE 95


>sp|COXX_HALS3|PROTOHEME IX farnesyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 6 WGHR 9
WGHR
Sbjct: 61 WGHR 64


>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VLYGWGH 8
LYGW H
Sbjct: 18 TLYGWVH 24


>sp|ARCD_HALSA|ARGININE/ORNITHINE antiporter ArcD|Halobacterium salinarum (strain ATCC 700922

Query: 4 YGWGH 8
YGWG+
Sbjct: 62 YGWGY 66


>sp|ARCD_HALS3|ARGININE/ORNITHINE antiporter ArcD|Halobacterium salinarum (strain ATCC 29341

Query: 4 YGWGH 8
YGWG+
Sbjct: 62 YGWGY 66


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 YGWGH 8
YGW H
Sbjct: 113 YGWEH 117


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 5 GWGHR 9
GWG+R
Sbjct: 307 GWGYR 311


>sp|COXX_HALSA|PROTOHEME IX farnesyltransferase|Halobacterium salinarum (strain ATCC

Query: 6 WGHR 9
WGHR
Sbjct: 44 WGHR 47


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 GWGHR 9
GWG+R
Sbjct: 313 GWGYR 317


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VLYGWGHR 9
+L+GWG +
Sbjct: 191 ILHGWGAK 198


>sp|COFE_METTH|COENZYME F420:L-glutamate ligase|Methanothermobacter thermautotrophicus

Query: 4 YGWGH 8
Y WGH
Sbjct: 227 YPWGH 231




125|SequenceR|630|621|NDRRGPVLYG

>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NDRRGPVLYG 10
NDR+GP G
Sbjct: 1256 NDRKGPNFRG 1265


>sp|PSB_ARCPA|PROTEASOME subunit beta|Archaeoglobus profundus (strain DSM 5631

Query: 2 DRRGPVLY 9
D+RGP +Y
Sbjct: 117 DKRGPSIY 124


>sp|MRE11_THEVO|DNA double-strand break repair protein|Thermoplasma volcanium (strain

Query: 1 NDRRGPVLY 9
NDR+ PV Y
Sbjct: 73 NDRQIPVFY 81


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 2 DRRGPVLYG 10
D GP LYG
Sbjct: 263 DEMGPYLYG 271


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 5 GPVLYG 10
GP+LYG
Sbjct: 214 GPILYG 219


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 1 NDRRGPVLY 9
D RGPVL+
Sbjct: 273 KDLRGPVLF 281


>sp|Y076_METFV|UNCHARACTERIZED protein Mfer_0076|Methanothermus fervidus (strain ATCC 43054

Query: 4 RGPVLYG 10
+GPV YG
Sbjct: 151 KGPVAYG 157


>sp|Y2140_SACS2|PUTATIVE esterase SSO2140|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RRGPVLYG 10
RRG VL+G
Sbjct: 46 RRGGVLHG 53


>sp|HEM1_METKA|GLUTAMYL-TRNA reductase|Methanopyrus kandleri (strain AV19 /

Query: 2 DRRGPVL 8
DRR P+L
Sbjct: 255 DRRSPIL 261


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 DRRGPVLYG 10
DRR VL+G
Sbjct: 42 DRRAVVLHG 50


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NDRRGPVLY 9
ND G VLY
Sbjct: 243 NDAEGKVLY 251


>sp|Y740_ARCFU|PUTATIVE uncharacterized protein AF_0740|Archaeoglobus fulgidus (strain ATCC

Query: 2 DRRGPVLY 9
D RGP +Y
Sbjct: 104 DERGPFIY 111


>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 3 RRGPVLYG 10
R G +LYG
Sbjct: 261 RNGSILYG 268


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 RRGPVL 8
RRGPVL
Sbjct: 152 RRGPVL 157


>sp|PSB1_CALMQ|PROTEASOME subunit beta 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NDRRGPVLYG 10
++ GPVLY
Sbjct: 119 DNEEGPVLYA 128


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 GPVLYG 10
GP+LYG
Sbjct: 59 GPLLYG 64


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 GPVLYG 10
GP+LYG
Sbjct: 59 GPLLYG 64


>sp|TRPD_METKA|ANTHRANILATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 RRGPVLYG 10
RRG V+YG
Sbjct: 213 RRGLVVYG 220


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 DRRGPVLYG 10
D+R +LYG
Sbjct: 48 DKRAALLYG 56


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 4 RGPVLYG 10
R P+LYG
Sbjct: 231 RDPILYG 237


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NDRRGPVL 8
+D RGP++
Sbjct: 153 DDERGPII 160


>sp|RL22_THEKO|LARGE ribosomal subunit protein uL22|Thermococcus kodakarensis (strain

Query: 4 RGPVLYG 10
RGPVL G
Sbjct: 122 RGPVLRG 128


>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 1 NDRRGPV 7
N+R GPV
Sbjct: 764 NERNGPV 770




126|SequenceR|635|626|PLKALNDRRG

>sp|MTRB_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanococcus maripaludis (strain

Query: 1 PLKALNDRRG 10
P+KA N R G
Sbjct: 60 PMKAYNGREG 69


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 3 KALNDRR 9
K+LNDRR
Sbjct: 451 KSLNDRR 457


>sp|KAD6_METKA|PUTATIVE adenylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 LKALNDRRG 10
L+A+N RRG
Sbjct: 160 LEAVNHRRG 168


>sp|TRMI_METJA|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 3 KALNDRRG 10
KALN +RG
Sbjct: 201 KALNKKRG 208


>sp|SRP54_METTP|SIGNAL recognition particle 54 kDa|Methanothrix thermoacetophila (strain

Query: 2 LKALNDRRG 10
LKAL DR+G
Sbjct: 144 LKALCDRQG 152


>sp|AKSA_METKA|HOMOCITRATE synthase AksA|Methanopyrus kandleri (strain AV19 /

Query: 2 LKALNDRR 9
+KAL DRR
Sbjct: 362 IKALGDRR 369


>sp|RL22_THEKO|LARGE ribosomal subunit protein uL22|Thermococcus kodakarensis (strain

Query: 1 PLKALNDRRG 10
P+K ND +G
Sbjct: 63 PMKRFNDSQG 72


>sp|RL22_PYRFU|LARGE ribosomal subunit protein uL22|Pyrococcus furiosus (strain ATCC

Query: 1 PLKALNDRRG 10
PLK ND +G
Sbjct: 62 PLKRYNDSQG 71


>sp|RL22_PYRAB|LARGE ribosomal subunit protein uL22|Pyrococcus abyssi (strain GE5 /

Query: 1 PLKALNDRRG 10
PLK ND +G
Sbjct: 62 PLKRYNDSQG 71




127|SequenceR|640|631|LTTGTPLKAL

>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 TGTPLKAL 10
TG PLKAL
Sbjct: 583 TGIPLKAL 590


>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TTGTPLKAL 10
TTGTP+ A+
Sbjct: 74 TTGTPISAI 82


>sp|AROC_METMP|CHORISMATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 TTGTPLKAL 10
TTGTP+ L
Sbjct: 74 TTGTPISGL 82


>sp|AROC_METM7|CHORISMATE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 TTGTPLKAL 10
TTGTP+ L
Sbjct: 74 TTGTPISGL 82


>sp|AROC_METM5|CHORISMATE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 TTGTPLKAL 10
TTGTP+ L
Sbjct: 74 TTGTPISGL 82


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LTTGTPLKAL 10
+TTG PLK +
Sbjct: 126 ITTGKPLKII 135


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LTTGTPLKAL 10
+TTGTP+ L
Sbjct: 76 ITTGTPISML 85


>sp|AROC_METAR|CHORISMATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LTTGTPLKAL 10
LTTGTP+ L
Sbjct: 75 LTTGTPIAML 84


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LTTGTPLKAL 10
TTGTP+ L
Sbjct: 70 FTTGTPVTVL 79


Query: 1 LTTGTPLKA 9
+TTG PL A
Sbjct: 280 ITTGMPLVA 288


>sp|AROC_PYRAB|CHORISMATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 TTGTPLKAL 10
TTGTP+ L
Sbjct: 71 TTGTPIAVL 79


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 4 GTPLKAL 10
GTPLKA+
Sbjct: 115 GTPLKAI 121


>sp|AROC_CALMQ|CHORISMATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LTTGTPL 7
LTTGTP+
Sbjct: 73 LTTGTPI 79


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TTGTPLKA 9
TTG PL A
Sbjct: 455 TTGNPLDA 462


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 LTTGTPLKAL 10
+TTG P+K +
Sbjct: 125 MTTGKPVKVI 134


>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii

Query: 1 LTTGTPL 7
+TTG+PL
Sbjct: 45 ITTGSPL 51


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 LTTGTP 6
+TTGTP
Sbjct: 254 ITTGTP 259


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 TTGTPL 7
TTGTP+
Sbjct: 76 TTGTPI 81


>sp|AROC_HALMA|CHORISMATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TTGTPL 7
TTGTP+
Sbjct: 76 TTGTPI 81


>sp|AROC_HALMD|CHORISMATE synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 TTGTPL 7
TTGTP+
Sbjct: 76 TTGTPI 81


>sp|AROC_METAC|CHORISMATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LTTGTPLKAL 10
++TGTP+ L
Sbjct: 75 MSTGTPISML 84


>sp|AROC_HALSA|CHORISMATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TTGTPL 7
TTGTP+
Sbjct: 76 TTGTPI 81


>sp|AROC_METVS|CHORISMATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 TTGTPLKAL 10
TTGTP+ +
Sbjct: 75 TTGTPISCI 83


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 3 TGTPLKAL 10
TGT LKA+
Sbjct: 231 TGTDLKAI 238


>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TTGTPLKAL 10
TTGTP+ +
Sbjct: 71 TTGTPVAVI 79


>sp|AROC_METBU|CHORISMATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 TTGTPLKAL 10
TTGTP+ +
Sbjct: 76 TTGTPISMM 84


>sp|AROC_HALWD|CHORISMATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 TTGTPL 7
TTGTP+
Sbjct: 76 TTGTPI 81


>sp|AROC_THEVO|CHORISMATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LTTGTPLK 8
+TTG P+K
Sbjct: 283 MTTGMPVK 290




128|SequenceR|645|636|VGASELTTGT

>sp|MCH_HALSA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VGASELTTGT 10
+GA EL TGT
Sbjct: 24 IGAFELDTGT 33


>sp|MCH_HALS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VGASELTTGT 10
+GA EL TGT
Sbjct: 24 IGAFELDTGT 33


>sp|AATF_METBU|A-TYPE ATP synthase subunit F|Methanococcoides burtonii (strain DSM 6242

Query: 1 VGASELTTG 9
VG+SE TG
Sbjct: 6 VGSSEFVTG 14


>sp|AATF_HALWD|A-TYPE ATP synthase subunit F|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VGASELTTG 9
VG+ E TTG
Sbjct: 8 VGSPEFTTG 16


>sp|RS15_METBF|SMALL ribosomal subunit protein uS15|Methanosarcina barkeri (strain

Query: 1 VGASELTTGT 10
+GA E+TT T
Sbjct: 28 IGAEEVTTIT 37




129|SequenceR|650|641|RYPCVVGASE

>sp|Y575_METJA|UNCHARACTERIZED protein MJ0575|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RYPCVVG 7
RYPCV G
Sbjct: 194 RYPCVAG 200


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PCVVGASE 10
PCVVG E
Sbjct: 453 PCVVGTKE 460


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 YPCVVGASE 10
Y CVVG+ E
Sbjct: 549 YICVVGSKE 557


>sp|RIFK_METBF|RIBOFLAVIN kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YPCVVGASE 10
YP VVG+ E
Sbjct: 168 YPVVVGSIE 176


>sp|AROD_METJA|3-DEHYDROQUINATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RYPCVV 6
+YPC++
Sbjct: 48 KYPCII 53


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 3 PCVVGASE 10
PCVVG +
Sbjct: 835 PCVVGTKK 842


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YPCVVGASE 10
Y CVVG+ E
Sbjct: 547 YVCVVGSKE 555


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 YPCVVGASE 10
Y CVVG+ E
Sbjct: 549 YICVVGSKE 557


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 3 PCVVG 7
PCVVG
Sbjct: 435 PCVVG 439


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 PCVVG 7
PCVVG
Sbjct: 914 PCVVG 918


>sp|PYRH_METHJ|URIDYLATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YPCVV 6
YPCVV
Sbjct: 89 YPCVV 93


>sp|Y1507_METJA|UNCHARACTERIZED ABC transporter permease MJ1507|Methanocaldococcus jannaschii

Query: 1 RYPCVVG 7
+Y CV+G
Sbjct: 149 KYACVIG 155


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 YPCVVGASE 10
Y CV+G +E
Sbjct: 589 YMCVIGDNE 597


>sp|Y2165_ARCFU|UNCHARACTERIZED protein AF_2165|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CVVGAS 9
CV+GAS
Sbjct: 177 CVIGAS 182


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 RYPCVVGAS 9
R C++GAS
Sbjct: 2 RRACIIGAS 10


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 RYPCVV 6
RYPC++
Sbjct: 546 RYPCML 551




130|SequenceR|655|646|LSEIARYPCV

>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LSEIARYPCV 10
L EIAR+P V
Sbjct: 516 LQEIARFPAV 525


>sp|Y575_METJA|UNCHARACTERIZED protein MJ0575|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IARYPCV 10
I RYPCV
Sbjct: 192 IQRYPCV 198


>sp|SYR_HALSA|ARGININE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LSEIARYPCV 10
L E+ARYP V
Sbjct: 553 LFELARYPLV 562


>sp|AROD_METJA|3-DEHYDROQUINATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSEIARYPCV 10
+ + A+YPC+
Sbjct: 43 IEKFAKYPCI 52


>sp|SYR_HALMA|ARGININE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LSEIARYPCV 10
L E+AR+P V
Sbjct: 500 LRELARFPAV 509


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 SEIARYP 8
SEI RYP
Sbjct: 637 SEIKRYP 643


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 4 IARYPCV 10
I+RYPC+
Sbjct: 544 ISRYPCM 550


>sp|SYR_HALLT|ARGININE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LSEIARYP 8
L E+AR+P
Sbjct: 522 LREVARFP 529


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 SEIARYPCV 10
+ +ARYP V
Sbjct: 81 TRVARYPVV 89


>sp|TRPF_PYRFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LSEIARY 7
LSEI+RY
Sbjct: 119 LSEISRY 125


>sp|THIE_METB6|THIAMINE-PHOSPHATE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 SEIARYPC 9
+EIAR+ C
Sbjct: 20 AEIARFAC 27


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 1 LSEIARYPC 9
LSE+ +PC
Sbjct: 267 LSELEYFPC 275


>sp|AGOG_AERPE|N-GLYCOSYLASE/DNA lyase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SEIARYPC 9
SE+ R PC
Sbjct: 278 SELVRRPC 285


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSEIARYPC 9
LSE+ +PC
Sbjct: 265 LSELNYFPC 273




131|SequenceR|660|651|CHKRYLSEIA

>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 4 RYLSEIA 10
RYLSE+A
Sbjct: 274 RYLSELA 280


>sp|DHQS_METLZ|3-DEHYDROQUINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 RYLSEIA 10
+YLSEIA
Sbjct: 246 KYLSEIA 252


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 1 CHKRYLSE 8
C ++YL+E
Sbjct: 179 CRRKYLAE 186


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 HKRYLSEIA 10
H++YL E+A
Sbjct: 384 HRQYLVELA 392


>sp|HEPT_THECF|PROBABLE ribonuclease HepT|Thermococcus cleftensis (strain DSM 27260

Query: 1 CHKRYLSEIA 10
HK YL +IA
Sbjct: 4 SHKDYLEDIA 13


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HKRYLSEIA 10
H+ YL E+A
Sbjct: 383 HREYLVELA 391


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 CHKRYLSEI 9
C KR +SEI
Sbjct: 14 CMKRSISEI 22




132|SequenceR|665|656|KGQELCHKRY

>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 1 KGQELCHKR 9
K Q++CH++
Sbjct: 34 KSQKVCHEK 42


>sp|RIFK_PYRCJ|RIBOFLAVIN kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 QELCHKRY 10
Q L H+RY
Sbjct: 130 QSLAHRRY 137


>sp|DAPF_METAR|DIAMINOPIMELATE epimerase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GQELCHKRY 10
+++CH+R+
Sbjct: 35 AKKVCHRRF 43


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KGQELCHKR 9
+G EL HKR
Sbjct: 44 EGDELKHKR 52


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 1 KGQELCHKRY 10
KG+E+ ++RY
Sbjct: 53 KGREVPYQRY 62


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KGQELCHK 8
K QE+C K
Sbjct: 314 KAQEICDK 321


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 4 ELCHKRY 10
E CH++Y
Sbjct: 149 ENCHRKY 155


>sp|DAPAL_PYRFU|UNCHARACTERIZED DapA-like lyase PF0657|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGQELCHKRY 10
KG+EL K Y
Sbjct: 61 KGRELTSKAY 70




133|SequenceR|670|661|PMLQQKGQEL

>sp|THI4_THEKO|THIAMINE thiazole synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PMLQQKGQEL 10
PM +KG+EL
Sbjct: 190 PMWAEKGEEL 199


>sp|HEM3_METBU|PROBABLE porphobilinogen deaminase|Methanococcoides burtonii (strain DSM

Query: 2 MLQQKGQEL 10
ML++KG EL
Sbjct: 21 MLEEKGHEL 29


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PMLQQKGQEL 10
PM+Q+K +EL
Sbjct: 321 PMVQEKVEEL 330


>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 4 QQKGQEL 10
Q+KGQE+
Sbjct: 22 QEKGQEI 28


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 1 PMLQQKGQEL 10
P+L+ KG E+
Sbjct: 281 PVLKSKGDEV 290




134|SequenceR|675|666|LGAEQPMLQQ

>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 1 LGAEQPML 8
+GA QPM+
Sbjct: 275 VGANQPMI 282




135|SequenceR|680|671|LFEEALGAEQ

>sp|Y1450_METJA|UNCHARACTERIZED protein MJ1450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFEEALG 7
LF+EALG
Sbjct: 346 LFKEALG 352


>sp|G3P_METKA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 FEEALGAE 9
+EEALGA+
Sbjct: 134 YEEALGAD 141




136|SequenceR|685|676|SNDTLLFEEA

>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NDTLLFEEA 10
+D L+FEEA
Sbjct: 16 SDDLVFEEA 24


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 NDTLLFEEA 10
ND LLF E+
Sbjct: 658 NDILLFSES 666




137|SequenceR|690|681|TQWIASNDTL

>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 QWIASNDTL 10
+W+ SND L
Sbjct: 204 KWLESNDNL 212


>sp|HEM1_METTP|GLUTAMYL-TRNA reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 QWIASNDTL 10
+W++S+DT+
Sbjct: 32 KWVSSHDTV 40


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 QWIASN 7
+WIASN
Sbjct: 128 RWIASN 133


>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QWIASNDTL 10
QW+ SN+ +
Sbjct: 510 QWVKSNEKV 518


>sp|RL15E_HALLT|LARGE ribosomal subunit protein eL15|Halorubrum lacusprofundi (strain

Query: 3 WIASND 8
WIAS+D
Sbjct: 150 WIASDD 155




138|SequenceR|695|686|DLEEVTQWIA

>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLEEVTQW 8
D EEV +W
Sbjct: 29 DFEEVIEW 36


>sp|Y1787_METS5|UPF0201 protein Msed_1787|Metallosphaera sedula (strain ATCC 51363

Query: 1 DLEEVTQWIA 10
DLE V W+A
Sbjct: 117 DLEAVVDWLA 126


>sp|Y3409_METJA|UNCHARACTERIZED protein MJECS09|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLEEVTQWI 9
DLE + +WI
Sbjct: 63 DLEYLVKWI 71


>sp|PUR2_PYRAB|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DLEEVTQWI 9
D+EE+ WI
Sbjct: 127 DVEEMKAWI 135


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 LEEVTQWI 9
LEE++ W+
Sbjct: 72 LEELSHWV 79


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LEEVTQW 8
LEE T+W
Sbjct: 125 LEEATKW 131


>sp|Y579_METJA|UNCHARACTERIZED protein MJ0579|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LEEVTQWI 9
+EE+ WI
Sbjct: 259 IEEIANWI 266


>sp|GVPL1_HALSA|GAS vesicle protein L1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLEEVTQWI 9
DLE+V +W+
Sbjct: 74 DLEQVKRWL 82


>sp|UPPS_PYRFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus

Query: 2 LEEVTQW 8
LEE+ +W
Sbjct: 67 LEEIVEW 73


>sp|Y399_METKA|UPF0201 protein MK0399|Methanopyrus kandleri (strain AV19 /

Query: 1 DLEEVTQWIA 10
D+E+V W+A
Sbjct: 127 DVEKVIDWLA 136


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DLEEVTQW 8
+LEEV +W
Sbjct: 521 NLEEVKKW 528


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 LEEVTQWI 9
+EEV +WI
Sbjct: 450 MEEVAKWI 457


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LEEVTQW 8
LEE T W
Sbjct: 125 LEEATNW 131


>sp|Y148_ARCFU|UNCHARACTERIZED protein AF_0148|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EEVTQWIA 10
EEV +W+A
Sbjct: 9 EEVMKWLA 16




139|SequenceR|700|691|EVELYDLEEV

>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 1 EVELYDLE 8
EVELYD E
Sbjct: 548 EVELYDSE 555




140|SequenceR|705|696|MKAEAEVELY

***** No hits found ******


141|SequenceR|710|701|ARLNEMKAEA

>sp|RPO10_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermoplasma acidophilum (strain

Query: 2 RLNEMKAEA 10
R+NE+KAE
Sbjct: 24 RVNEIKAEG 32


>sp|EI2BL_PYRAB|PUTATIVE translation initiation factor eIF-2B|Pyrococcus abyssi (strain

Query: 3 LNEMKAE 9
LNEMKAE
Sbjct: 10 LNEMKAE 16


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RLNEMKAEA 10
R NE+KA+A
Sbjct: 161 RFNEVKADA 169


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RLNEMKAEA 10
R NE+KA+A
Sbjct: 161 RYNEVKADA 169


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 1 ARLNEMKAE 9
ARL+E+K E
Sbjct: 489 ARLDELKVE 497




142|SequenceR|715|706|QGPVAARLNE

>sp|RISB_METLZ|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GPVAARLNE 10
G VAAR NE
Sbjct: 16 GIVAARFNE 24


>sp|GCST_AERPE|PROBABLE aminomethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 QGPVAARLNE 10
QGP AAR+ E
Sbjct: 152 QGPGAARVME 161


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QGPVAA 6
QGPVAA
Sbjct: 34 QGPVAA 39


>sp|RL14_CENSY|LARGE ribosomal subunit protein uL14|Cenarchaeum symbiosum (strain A)

Query: 1 QGPVAARLNE 10
+GPVAA +E
Sbjct: 122 KGPVAAEASE 131


>sp|RL14_NITMS|LARGE ribosomal subunit protein uL14|Nitrosopumilus maritimus (strain

Query: 1 QGPVAARLNE 10
+GPVAA +E
Sbjct: 118 KGPVAAEASE 127




143|SequenceR|720|711|TLALPQGPVA

>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 1 TLALPQGP 8
+LA+P+GP
Sbjct: 77 SLAIPEGP 84


>sp|KDPA_THEVO|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma volcanium (strain

Query: 1 TLALPQGPVA 10
T+ +P GPVA
Sbjct: 232 TVNIPLGPVA 241


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 1 TLALPQGPVA 10
TL P GP A
Sbjct: 394 TLGHPDGPAA 403


>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 1 TLALPQGPV 9
+L PQGPV
Sbjct: 279 SLVAPQGPV 287


>sp|HTR6_HALS3|TRANSDUCER protein Htr6|Halobacterium salinarum (strain ATCC 29341

Query: 1 TLALPQGP 8
T A+P+GP
Sbjct: 150 TAAVPEGP 157


>sp|GSA_CALMQ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 TLALPQGPV 9
++ PQGPV
Sbjct: 284 SMITPQGPV 292


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 1 TLALPQGPVA 10
TL P GP A
Sbjct: 394 TLGHPDGPAA 403


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LALPQGPV 9
L PQGPV
Sbjct: 293 LVAPQGPV 300


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 LALPQGPVA 10
LAL +GP+A
Sbjct: 572 LALKEGPLA 580




144|SequenceR|725|716|PGGRATLALP

>sp|IF5A_PYRNV|TRANSLATION initiation factor 5A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GGRATLALP 10
GG+ TL+LP
Sbjct: 52 GGKRTLSLP 60


>sp|IF5A_PYRIL|TRANSLATION initiation factor 5A|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GGRATLALP 10
GG+ TL+LP
Sbjct: 52 GGKRTLSLP 60


>sp|IF5A_PYRAR|TRANSLATION initiation factor 5A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GGRATLALP 10
GG+ TL+LP
Sbjct: 52 GGKRTLSLP 60


>sp|IF5A_PYRAE|TRANSLATION initiation factor 5A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GGRATLALP 10
GG+ TL+LP
Sbjct: 58 GGKRTLSLP 66


>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 GGRATLALP 10
GG T+ALP
Sbjct: 9 GGSGTVALP 17


>sp|RL11_METPE|LARGE ribosomal subunit protein uL11|Methanosphaerula palustris (strain

Query: 1 PGGRATLALP 10
PGGRAT P
Sbjct: 10 PGGRATAGPP 19


>sp|RL11_METLZ|LARGE ribosomal subunit protein uL11|Methanocorpusculum labreanum

Query: 1 PGGRAT 6
PGGRAT
Sbjct: 10 PGGRAT 15


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 3 GRATLALP 10
GR++LALP
Sbjct: 48 GRSSLALP 55


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 3 GRATLALP 10
G+ATLA+P
Sbjct: 90 GKATLAVP 97


>sp|HTR7_HALSA|TRANSDUCER protein Htr7|Halobacterium salinarum (strain ATCC 700922

Query: 2 GGRATLAL 9
GG ATLA+
Sbjct: 92 GGTATLAI 99


>sp|HTR7_HALS3|TRANSDUCER protein Htr7|Halobacterium salinarum (strain ATCC 29341

Query: 2 GGRATLAL 9
GG ATLA+
Sbjct: 92 GGTATLAI 99




145|SequenceR|730|721|PQTDKPGGRA

>sp|STOPP_PYRHO|MEMBRANE-BOUND protease PH1510|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QTDKPGGRA 10
+ D PGGRA
Sbjct: 59 ELDTPGGRA 67


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PQTDKP 6
P+TDKP
Sbjct: 28 PETDKP 33


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 1 PQTDKPGG 8
P T+ PGG
Sbjct: 14 PPTEAPGG 21


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PQTDKP 6
P TDKP
Sbjct: 181 PDTDKP 186


>sp|RL3_METTH|LARGE ribosomal subunit protein uL3|Methanothermobacter

Query: 1 PQTDKPG 7
PQ D+PG
Sbjct: 31 PQVDEPG 37


>sp|RS5_NATPD|SMALL ribosomal subunit protein uS5|Natronomonas pharaonis (strain ATCC

Query: 4 DKPGGR 9
D+PGGR
Sbjct: 118 DRPGGR 123


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 1 PQTDKPGG 8
P+T PGG
Sbjct: 306 PETAAPGG 313




146|SequenceR|735|726|GHHYSPQTDK

>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 3 HYSPQTD 9
HY PQ+D
Sbjct: 271 HYEPQSD 277


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 3 HYSPQTD 9
HY PQ+D
Sbjct: 271 HYEPQSD 277


>sp|PSTS_METJA|PHOSPHATE-BINDING protein PstS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GHHYSPQTDK 10
G HYSP+ K
Sbjct: 337 GKHYSPEKAK 346


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HHYSPQTDK 10
H+Y P+ DK
Sbjct: 379 HNYPPRNDK 387


>sp|RL15E_METB6|LARGE ribosomal subunit protein eL15|Methanoregula boonei (strain DSM

Query: 1 GHHYSPQTDK 10
GHH S Q+DK
Sbjct: 137 GHHPSIQSDK 146


>sp|NRPR1_METMA|GLOBAL nitrogen regulator NrpRI|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 YSPQTDK 10
Y+P+TDK
Sbjct: 101 YNPETDK 107


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 2 HHYSPQTD 9
H Y+PQ D
Sbjct: 331 HKYAPQYD 338


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GHHYSPQTD 9
GH + P TD
Sbjct: 49 GHLFGPHTD 57


>sp|Y1656_ARCFU|UNCHARACTERIZED protein AF_1656|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GHHYSPQTD 9
G H SPQT+
Sbjct: 107 GMHLSPQTN 115


>sp|DTDA_NATPD|D-AMINOACYL-TRNA deacylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GHHYSPQTDK 10
G HY+P+ D+
Sbjct: 193 GGHYAPRFDR 202


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GHHYSPQTDK 10
G HY P DK
Sbjct: 126 GVHYCPVKDK 135


>sp|DTDA_PYRFU|D-AMINOACYL-TRNA deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GHHYSPQTDK 10
G HY+P+ K
Sbjct: 193 GGHYAPKQTK 202


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 YSPQTD 9
Y PQTD
Sbjct: 461 YDPQTD 466


>sp|COFD_METPE|2-PHOSPHO-L-LACTATE transferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GHHYSPQTD 9
G+H SP D
Sbjct: 41 GNHLSPDVD 49


>sp|DTDA_PYRHO|D-AMINOACYL-TRNA deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GHHYSPQTDK 10
G HY+P+ K
Sbjct: 197 GGHYAPKQTK 206


>sp|DTDA_THEGJ|D-AMINOACYL-TRNA deacylase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GHHYSPQTDK 10
G HY+P+ K
Sbjct: 196 GGHYAPKQTK 205


>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 1 GHHYSPQTD 9
G+H SP D
Sbjct: 41 GNHISPDVD 49


>sp|DTDA_THEKO|D-AMINOACYL-TRNA deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GHHYSPQTDK 10
G HY+P+ K
Sbjct: 195 GGHYAPKQTK 204


>sp|DTDA_PYRAB|D-AMINOACYL-TRNA deacylase|Pyrococcus abyssi (strain GE5 /

Query: 1 GHHYSPQTDK 10
G HY+P+ K
Sbjct: 195 GGHYAPKQTK 204


>sp|DTDA_THEON|D-AMINOACYL-TRNA deacylase|Thermococcus onnurineus (strain NA1)

Query: 1 GHHYSPQTDK 10
G HY+P+ K
Sbjct: 195 GGHYAPKQTK 204


>sp|Y310_ARCFU|UNCHARACTERIZED protein AF_0310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GHHYSP 6
GH YSP
Sbjct: 35 GHFYSP 40


>sp|Y045_METTH|MEMO1 family protein MTH_45|Methanothermobacter thermautotrophicus

Query: 3 HYSPQ 7
HYSPQ
Sbjct: 194 HYSPQ 198


>sp|DTDA_METVS|D-AMINOACYL-TRNA deacylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GHHYSPQTDK 10
G HYSP+ K
Sbjct: 180 GGHYSPKFTK 189


>sp|DTDA_METM5|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C5 /

Query: 1 GHHYSPQTDK 10
G HYSP+ K
Sbjct: 180 GGHYSPKFTK 189


>sp|DTDA_METM7|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C7 /

Query: 1 GHHYSPQTDK 10
G HYSP+ K
Sbjct: 180 GGHYSPKFTK 189


>sp|DTDA_META3|D-AMINOACYL-TRNA deacylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GHHYSPQTDK 10
G HY+P+ K
Sbjct: 188 GGHYAPRFTK 197


>sp|CPGS_METS3|CYCLIC 2,3-diphosphoglycerate synthetase|Methanobrevibacter smithii

Query: 1 GHHYSPQTDK 10
G HY P T +
Sbjct: 13 GEHYLPVTQE 22


>sp|DTDA_METMP|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GHHYSPQTDK 10
G HYSP+ K
Sbjct: 180 GGHYSPKFTK 189


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GHHYSPQT 8
G+H+ P T
Sbjct: 1052 GYHFGPYT 1059


>sp|DTDA_METJA|D-AMINOACYL-TRNA deacylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GHHYSPQTDK 10
G HY+P+ K
Sbjct: 181 GGHYAPKFTK 190




147|SequenceR|740|731|NYPGNGHHYS

>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NYPGNGHHY 9
++PG G+HY
Sbjct: 323 SFPGLGNHY 331


>sp|TRUD_PYRAB|PROBABLE tRNA pseudouridine synthase D|Pyrococcus abyssi (strain GE5 /

Query: 2 YPGNG 6
YPGNG
Sbjct: 189 YPGNG 193


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 NYPGNGHHY 9
++PG G HY
Sbjct: 322 SFPGLGDHY 330


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 2 YPGNG 6
YPGNG
Sbjct: 191 YPGNG 195


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YPGNGHH 8
+PGNG H
Sbjct: 227 FPGNGMH 233


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 2 YPGNGHH 8
+PGNG H
Sbjct: 227 FPGNGMH 233


>sp|NADM_METHJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 NGHHY 9
NGHHY
Sbjct: 15 NGHHY 19


>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NYPGN 5
NYPGN
Sbjct: 378 NYPGN 382


>sp|GLNA_THEKO|GLUTAMINE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YPGNGHH 8
+PGNG H
Sbjct: 231 FPGNGMH 237


>sp|Y531_METTH|UNCHARACTERIZED protein MTH_531|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YPGNGHHY 9
YPG G Y
Sbjct: 272 YPGQGLRY 279


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 YPGNGHHY 9
YPG H Y
Sbjct: 217 YPGKVHPY 224


>sp|PSTS_METJA|PHOSPHATE-BINDING protein PstS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 NGHHYS 10
NG HYS
Sbjct: 336 NGKHYS 341


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PGNGHHY 9
P GHHY
Sbjct: 25 PYCGHHY 31


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YPGNGHHY 9
YPG G Y
Sbjct: 753 YPGGGGEY 760


>sp|GLNA_PYRHO|GLUTAMINE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PGNGHH 8
PGNG H
Sbjct: 232 PGNGMH 237


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 3 PGNGHH 8
PGNG H
Sbjct: 228 PGNGMH 233




148|SequenceR|745|736|PIDVDNYPGN

>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 DVDNYPG 9
DVD YPG
Sbjct: 142 DVDTYPG 148


>sp|IF2A_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 2 IDVDNYPG 9
+D+D YPG
Sbjct: 29 LDLDEYPG 36


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 DVDNYPG 9
+VD YPG
Sbjct: 144 EVDKYPG 150


>sp|COMB_METTH|2-PHOSPHOSULFOLACTATE phosphatase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PIDVDNYPGN 10
P++V NY G+
Sbjct: 76 PLEVKNYRGD 85


>sp|ACDE2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Archaeoglobus

Query: 1 PIDVDNYPG 9
P DV N PG
Sbjct: 8 PFDVANIPG 16


>sp|TRXB_METJA|PUTATIVE thioredoxin reductase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 VDNYPG 9
V+NYPG
Sbjct: 46 VENYPG 51


>sp|FENR_IGNH4|FERREDOXIN--NADP reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 VDNYPG 9
V+NYPG
Sbjct: 47 VENYPG 52


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 DVDNYP 8
DVD YP
Sbjct: 144 DVDTYP 149


>sp|DPCKG_HALWD|GTP-DEPENDENT dephospho-CoA kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IDVDNYPG 9
IDV+N PG
Sbjct: 85 IDVENQPG 92


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 DVDNYP 8
DVD YP
Sbjct: 143 DVDKYP 148


>sp|MTD_METMJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoculleus

Query: 1 PIDVDNYPGN 10
PI++ +Y GN
Sbjct: 131 PIEMADYNGN 140


>sp|IF2A_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 IDVDNYPG 9
+++D YPG
Sbjct: 29 LELDEYPG 36


>sp|IF2A_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 IDVDNYPG 9
+++D YPG
Sbjct: 29 LELDEYPG 36


>sp|DPO4_SULTO|DNA polymerase IV|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IDVDNYPG 9
ID+D PG
Sbjct: 178 IDIDEVPG 185


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 1 PIDVDNYPGN 10
PI++ +Y GN
Sbjct: 131 PIEMADYNGN 140


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 IDVDNYPG 9
ID++ YPG
Sbjct: 280 IDLEIYPG 287


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DVDNYP 8
DVD YP
Sbjct: 147 DVDTYP 152


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PIDVDNYP 8
P D +N+P
Sbjct: 591 PADAENFP 598


>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 1 PIDVDNYPG 9
PID+ + PG
Sbjct: 102 PIDIISIPG 110


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PIDVDNYP 8
P D +N+P
Sbjct: 591 PADAENFP 598


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 2 IDVDNYPGN 10
+D+DN GN
Sbjct: 398 LDIDNQLGN 406


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PIDVDNYP 8
P+D++ YP
Sbjct: 158 PVDLNKYP 165


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IDVDNYPGN 10
ID++ YP N
Sbjct: 114 IDINGYPLN 122


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IDVDNY 7
ID+DNY
Sbjct: 227 IDLDNY 232


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IDVDNYPG 9
IDV NY G
Sbjct: 298 IDVSNYLG 305


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 DVDNYP 8
DVD YP
Sbjct: 144 DVDKYP 149




149|SequenceR|750|741|FFWCGPIDVD

>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FFWCGP 6
FF+CGP
Sbjct: 362 FFYCGP 367


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 3 WCGPID 8
WC PID
Sbjct: 456 WCEPID 461


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FFWCGP 6
+F+CGP
Sbjct: 362 YFYCGP 367


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FFWCGP 6
+F+CGP
Sbjct: 362 YFYCGP 367


>sp|RL10E_NATPD|LARGE ribosomal subunit protein uL16|Natronomonas pharaonis (strain ATCC

Query: 3 WCGPIDVD 10
WC P D D
Sbjct: 140 WCHPEDAD 147


>sp|DTDA_NATPD|D-AMINOACYL-TRNA deacylase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 CGPID 8
CGPID
Sbjct: 289 CGPID 293


>sp|PURA_METVS|ADENYLOSUCCINATE synthetase|Methanococcus vannielii (strain ATCC 35089

Query: 4 CGPIDVD 10
CGP +VD
Sbjct: 131 CGPANVD 137


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 4 CGPIDVD 10
CGP +VD
Sbjct: 131 CGPANVD 137


>sp|PURA_METM7|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C7 /

Query: 4 CGPIDVD 10
CGP +VD
Sbjct: 131 CGPANVD 137


>sp|PURA_METM6|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C6 /

Query: 4 CGPIDVD 10
CGP +VD
Sbjct: 131 CGPANVD 137


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 4 CGPIDVD 10
CGP +VD
Sbjct: 131 CGPANVD 137


>sp|PURA_METJA|ADENYLOSUCCINATE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CGPIDVD 10
CGP +VD
Sbjct: 137 CGPANVD 143


>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 CGPIDVD 10
CGP +VD
Sbjct: 131 CGPANVD 137


>sp|PURA_ARCFU|ADENYLOSUCCINATE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CGPIDVD 10
CGP +VD
Sbjct: 128 CGPANVD 134


>sp|SYY_PICTO|TYROSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 5 GPIDVD 10
GP+DVD
Sbjct: 284 GPVDVD 289


>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FWCG 5
FWCG
Sbjct: 414 FWCG 417


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FFWCG 5
F WCG
Sbjct: 433 FMWCG 437


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FWCG 5
FWCG
Sbjct: 414 FWCG 417


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FFWCG 5
++WCG
Sbjct: 114 YYWCG 118


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FWCGPIDVD 10
F+ GP DVD
Sbjct: 490 FFDGPADVD 498


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 3 WCGPIDV 9
WC P D+
Sbjct: 670 WCSPSDL 676


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 FWCG 5
FWCG
Sbjct: 276 FWCG 279


>sp|PURA_PICTO|ADENYLOSUCCINATE synthetase|Picrophilus torridus (strain ATCC 700027

Query: 5 GPIDVD 10
GP+D+D
Sbjct: 169 GPVDID 174


>sp|DPHB_PYRNV|DIPHTHINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 WCGPIDVD 10
+ GPIDV+
Sbjct: 33 YTGPIDVE 40


>sp|DPHB_PYRCJ|DIPHTHINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 WCGPIDVD 10
+ GPIDV+
Sbjct: 33 YTGPIDVE 40


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 CGPIDV 9
CGP DV
Sbjct: 305 CGPSDV 310


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 CGPIDV 9
CGP D+
Sbjct: 305 CGPADI 310


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FWCGPIDV 9
+W G +D+
Sbjct: 416 YWVGKVDI 423




150|SequenceR|755|746|KHPLKFFWCG

>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 KHPLKF 6
KHP+KF
Sbjct: 498 KHPMKF 503


>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HPLKFFW 8
HPL+ W
Sbjct: 232 HPLELLW 238


>sp|Y511_METAC|UPF0228 protein MA_0511|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 KFFWC 9
KF WC
Sbjct: 151 KFLWC 155


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 4 LKFFWCG 10
LK+FW G
Sbjct: 688 LKYFWDG 694


>sp|HOSA_PYRHO|HOMOCITRATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HPLKFF 7
HPL+F+
Sbjct: 167 HPLRFY 172


>sp|HOSA_PYRAB|HOMOCITRATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 HPLKFF 7
HPL+F+
Sbjct: 167 HPLRFY 172


>sp|COBD_ARCFU|PROBABLE cobalamin biosynthesis protein CobD|Archaeoglobus fulgidus

Query: 2 HPLKFFW 8
+PL F W
Sbjct: 74 YPLNFLW 80


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 3 PLKFFW 8
P KF+W
Sbjct: 38 PYKFYW 43


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 HPLKFFWCG 10
HP F W G
Sbjct: 257 HPRLFRWAG 265


>sp|Y798_METJA|TPR repeat-containing protein MJ0798|Methanocaldococcus jannaschii

Query: 1 KHPLKFF 7
KH LK+F
Sbjct: 253 KHALKYF 259


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 KHPLKFFW 8
K PLK +W
Sbjct: 697 KAPLKDYW 704


>sp|Y1331_ARCFU|UNCHARACTERIZED protein AF_1331|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 KFFWC 9
K++WC
Sbjct: 294 KYYWC 298


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 HPLKFF 7
HP KFF
Sbjct: 331 HPSKFF 336


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 HPLKFF 7
HP KFF
Sbjct: 331 HPSKFF 336


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 HPLKFF 7
HP KFF
Sbjct: 331 HPSKFF 336




151|SequenceR|760|751|CSNGDKHPLK

>sp|GLCD2_PICTO|GLUCOSE/GALACTOSE 1-dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 CSNGDKH 7
CS+GDKH
Sbjct: 109 CSDGDKH 115


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 SNGDKHPL 9
SNGD HP+
Sbjct: 289 SNGDLHPM 296


>sp|NFI_PYRAE|ENDONUCLEASE V|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CSNGDKHPLK 10
C +GD +PL+
Sbjct: 182 CKSGDVYPLR 191


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 NGDKHP 8
NGDK+P
Sbjct: 439 NGDKYP 444


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 CSNGDKHPLK 10
C+ GD+H L+
Sbjct: 258 CTFGDQHDLE 267


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 2 SNGDKHP 8
S+G KHP
Sbjct: 77 SDGTKHP 83


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 2 SNGDKHP 8
S+G KHP
Sbjct: 77 SDGTKHP 83


>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 CSNGDK 6
C+NGD+
Sbjct: 465 CANGDR 470


>sp|RL6_META3|LARGE ribosomal subunit protein uL6|Methanococcus aeolicus (strain ATCC

Query: 4 GDKHPLK 10
G+KHP K
Sbjct: 116 GEKHPRK 122


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 3 NGDKHPLK 10
NGD+ P+K
Sbjct: 180 NGDEVPIK 187


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 3 NGDKHPLK 10
NGD+ P+K
Sbjct: 180 NGDEVPIK 187


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 3 NGDKHPLK 10
NGD+ P+K
Sbjct: 180 NGDEVPIK 187


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 NGDKHPLK 10
NGD+ P+K
Sbjct: 180 NGDEVPIK 187


>sp|AATE_SULAC|A-TYPE ATP synthase subunit E|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CSNGDK 6
CSN DK
Sbjct: 123 CSNNDK 128


>sp|UREG_CENSY|UREASE accessory protein UreG|Cenarchaeum symbiosum (strain A)

Query: 2 SNGDKHPLK 10
+ GDK+P K
Sbjct: 132 AGGDKYPRK 140




152|SequenceR|765|756|PSGVNCSNGD

>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PSGVNCSNG 9
P+G+ CS G
Sbjct: 418 PTGIGCSRG 426


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 1 PSGVNCSNG 9
P G NCS+G
Sbjct: 429 PGGGNCSSG 437


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 1 PSGVNCSNG 9
PS V CSNG
Sbjct: 65 PSDVYCSNG 73


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GVNCSNG 9
G NCSNG
Sbjct: 40 GKNCSNG 46


>sp|Y3533_METJA|UNCHARACTERIZED protein MJECL33|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SGVNCSNGD 10
SGV+ NGD
Sbjct: 349 SGVDLHNGD 357


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 2 SGVNCS 7
SGVNC+
Sbjct: 324 SGVNCT 329


>sp|MTNA_METJA|PUTATIVE methylthioribose-1-phosphate isomerase|Methanocaldococcus

Query: 1 PSGVNCSN 8
P GV C N
Sbjct: 289 PEGVGCYN 296


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 3 GVNCSNGD 10
GVN NGD
Sbjct: 234 GVNNDNGD 241


>sp|SERC_METMA|PHOSPHOSERINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SGVNCSNGD 10
SGV NGD
Sbjct: 145 SGVKVPNGD 153


>sp|SERC_METBF|PHOSPHOSERINE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 SGVNCSNGD 10
SGV NGD
Sbjct: 145 SGVKVPNGD 153


>sp|DPO4_PICTO|DNA polymerase IV|Picrophilus torridus (strain ATCC 700027

Query: 1 PSGVNCSNGD 10
P+G+ C + D
Sbjct: 156 PNGIKCISAD 165


>sp|GLYA_METAR|SERINE hydroxymethyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 SGVNCS 7
SGVNC+
Sbjct: 91 SGVNCN 96




153|SequenceR|770|761|FDKAFPSGVN

>sp|ASPD_METBU|L-ASPARTATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 3 KAFPSGVN 10
KAFPS VN
Sbjct: 185 KAFPSNVN 192


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 FDKAFPSGVN 10
F KA P G+N
Sbjct: 1013 FSKALPKGLN 1022


>sp|RIFK_SULTO|RIBOFLAVIN kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KAFPSGVN 10
KAFPS +N
Sbjct: 83 KAFPSSIN 90


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 3 KAFPSGVN 10
K FPSGVN
Sbjct: 12 KLFPSGVN 19


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KAFPSGVN 10
KA PSG N
Sbjct: 304 KALPSGYN 311


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FDKAFPSGV 9
F+K FP+ V
Sbjct: 494 FEKTFPASV 502


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 FDKAFPSGVN 10
F K P G+N
Sbjct: 561 FSKTLPKGLN 570


>sp|DAPF_METAR|DIAMINOPIMELATE epimerase|Methanocella arvoryzae (strain DSM 22066

Query: 3 KAFPSGVN 10
K FP G+N
Sbjct: 186 KTFPKGIN 193


>sp|GSA_NITMS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 KAFPSGVN 10
K PSGVN
Sbjct: 12 KVIPSGVN 19


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 KAFPSGVN 10
+ FP GVN
Sbjct: 8 QVFPGGVN 15


>sp|GSA1_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 1|Cenarchaeum symbiosum (strain A)

Query: 3 KAFPSGVN 10
K PSGVN
Sbjct: 12 KVIPSGVN 19


>sp|PYRD_HALMA|DIHYDROOROTATE dehydrogenase (quinone)|Haloarcula marismortui (strain ATCC 43049

Query: 2 DKAFPSGVN 10
D FP GVN
Sbjct: 136 DAPFPVGVN 144


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FDKAFPSG 8
+D+ +PSG
Sbjct: 543 YDRIYPSG 550


>sp|MCRB_METBF|METHYL-COENZYME M reductase subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 2 DKAFPSGVN 10
DK PSG N
Sbjct: 282 DKTAPSGYN 290


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 KAFPSGVN 10
K FP GVN
Sbjct: 12 KLFPMGVN 19




154|SequenceR|775|766|EMKPLFDKAF

>sp|MOAB_PYRFU|MOLYBDOPTERIN adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MKPLFDK 8
+KPLFDK
Sbjct: 94 IKPLFDK 100


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 1 EMKPLFDK 8
E+KP+F+K
Sbjct: 233 EVKPIFEK 240


>sp|Y154_ARCFU|UNCHARACTERIZED protein AF_0154|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PLFDKAF 10
PLF+KA+
Sbjct: 209 PLFEKAY 215


>sp|LYSY_NATPD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 MKPLFD 7
+KPLFD
Sbjct: 156 LKPLFD 161


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 MKPLFD 7
+KPLFD
Sbjct: 156 LKPLFD 161


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EMKPLFDKAF 10
EMK +FD+ +
Sbjct: 209 EMKKVFDRVY 218


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 3 KPLFDKAF 10
KP FDK F
Sbjct: 117 KPFFDKIF 124


>sp|G3P_HYPBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Hyperthermus butylicus (strain DSM 5456

Query: 3 KPLFDKA 9
KPL++KA
Sbjct: 96 KPLYEKA 102


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KPLFDKA 9
KPL++KA
Sbjct: 96 KPLYEKA 102


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EMKPLFDK 8
E+KPLF K
Sbjct: 526 EVKPLFRK 533


>sp|Y1517_METJA|UNCHARACTERIZED protein MJ1517|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EMKPLFDKAF 10
E+KP FD+ +
Sbjct: 131 ELKPKFDEFY 140


>sp|DPCKG_METBU|GTP-DEPENDENT dephospho-CoA kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EMKPLFDK 8
E+K LFDK
Sbjct: 159 ELKDLFDK 166


>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EMKPLFDK 8
E PLFDK
Sbjct: 269 EWSPLFDK 276


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EMKPLFDK 8
E+KPLF K
Sbjct: 531 EVKPLFRK 538


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 3 KPLFDKA 9
KPL++KA
Sbjct: 96 KPLYEKA 102


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EMKPLFDKA 9
E+KPLF K
Sbjct: 531 EVKPLFRKV 539


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KPLFDKA 9
KPL++KA
Sbjct: 96 KPLYEKA 102


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 3 KPLFDKAF 10
KP FD+ F
Sbjct: 117 KPFFDRIF 124


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EMKPLFDK 8
EMK ++DK
Sbjct: 200 EMKSMYDK 207


>sp|Y1535_METJA|UNCHARACTERIZED protein MJ1535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EMKPLFDKAF 10
EMK +F+K +
Sbjct: 165 EMKEIFEKEY 174




155|SequenceR|780|771|QLTGDEMKPL

>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 1 QLTGDEMKPL 10
+LTGDE KPL
Sbjct: 364 KLTGDEKKPL 373


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QLTGDEMKP 9
++TGDE+KP
Sbjct: 959 EVTGDELKP 967


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LTGDEMKP 9
+TG+EM+P
Sbjct: 165 ITGEEMRP 172


>sp|ALF1_THEKO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QLTGDEMKP 9
++ GDE+KP
Sbjct: 71 RMAGDELKP 79


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TGDEMKP 9
TG+E+KP
Sbjct: 276 TGEELKP 282


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QLTGDEMKP 9
++ GDE+KP
Sbjct: 600 KVRGDELKP 608


>sp|ALF1_PYRHO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QLTGDEMKP 9
++ GDE+KP
Sbjct: 71 RIAGDEVKP 79


>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LTGDEMKPL 10
LT DE+KP+
Sbjct: 96 LTEDELKPI 104


>sp|ALF1_PYRFU|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QLTGDEMKP 9
++ GDE+KP
Sbjct: 71 RIAGDEVKP 79


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 QLTGDEMKP 9
++TG E+KP
Sbjct: 597 EVTGGEIKP 605


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LTGDEMKPL 10
L+ DE+KP+
Sbjct: 97 LSDDELKPI 105


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 2 LTGDEMKPL 10
L+ DE+KP+
Sbjct: 97 LSEDELKPI 105


>sp|Y1468_SULAC|DNA-BINDING protein Saci_1468|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QLTGDEMKPL 10
Q+T DE+K +
Sbjct: 65 QITDDELKQI 74


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 2 LTGDEMKPL 10
+TGDEM L
Sbjct: 245 ITGDEMLAL 253


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LTGDEMKPL 10
L+ DE+KP+
Sbjct: 97 LSEDELKPI 105




156|SequenceR|785|776|GGPGAQLTGD

>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 3 PGAQLTGD 10
PGA++ GD
Sbjct: 157 PGARVIGD 164


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GGPGAQLTGD 10
GG G ++ GD
Sbjct: 150 GGKGVKIVGD 159


>sp|FLPA_METHJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanospirillum hungatei JF-1

Query: 3 PGAQLTGD 10
PGA L GD
Sbjct: 11 PGAVLPGD 18


>sp|RS12_METM7|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain C7

Query: 1 GGPGAQLTGD 10
GGP Q GD
Sbjct: 109 GGPSGQAKGD 118


>sp|RS12_METMP|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain

Query: 1 GGPGAQLTGD 10
GGP Q GD
Sbjct: 109 GGPSGQAKGD 118


>sp|RS12_METM5|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain C5

Query: 1 GGPGAQLTGD 10
GGP Q GD
Sbjct: 109 GGPSGQAKGD 118


>sp|RS12_META3|SMALL ribosomal subunit protein uS12|Methanococcus aeolicus (strain ATCC

Query: 1 GGPGAQLTGD 10
GGP Q GD
Sbjct: 109 GGPSGQAKGD 118


>sp|RS12_METVS|SMALL ribosomal subunit protein uS12|Methanococcus vannielii (strain ATCC

Query: 1 GGPGAQLTGD 10
GGP Q GD
Sbjct: 109 GGPSGQAKGD 118


>sp|RPO3_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 2 GPGAQLTGD 10
GPG +GD
Sbjct: 92 GPGTAYSGD 100


>sp|RPO3_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 2 GPGAQLTGD 10
GPG +GD
Sbjct: 92 GPGTAYSGD 100




157|SequenceR|790|781|RPGSAGGPGA

>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RPGSAGG 7
RPG AGG
Sbjct: 395 RPGKAGG 401


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 RPGSAGG 7
RPG AGG
Sbjct: 371 RPGKAGG 377


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RPGSAGGPG 9
R G+AGG G
Sbjct: 139 RQGAAGGKG 147


>sp|Y887_METTH|UPF0104 membrane protein MTH_887|Methanothermobacter thermautotrophicus

Query: 2 PGSAGG 7
PG+AGG
Sbjct: 104 PGAAGG 109


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 2 PGSAGGPG 9
PG+ GG G
Sbjct: 136 PGAKGGKG 143


>sp|PURP_SULAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PGSAGGPG 9
PG+ GG G
Sbjct: 137 PGAKGGKG 144


>sp|PROF2_LOKSG|LOKI profilin-2|Lokiarchaeum sp. (strain GC14_75)

Query: 2 PGSAGGPGA 10
P GGPGA
Sbjct: 97 PIPIGGPGA 105


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 3 GSAGGPGA 10
G+AGGP A
Sbjct: 624 GNAGGPSA 631


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 2 PGSAGGPG 9
PG+ GG G
Sbjct: 156 PGAKGGKG 163


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PGSAGGP 8
PGS GGP
Sbjct: 254 PGSQGGP 260


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 2 PGSAGGPG 9
PG+ GG G
Sbjct: 160 PGARGGQG 167


>sp|GCH32_HALSA|GTP cyclohydrolase III 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGSAGGPGA 10
PG AG PGA
Sbjct: 123 PGFAGTPGA 131


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GSAGGPG 9
G AGGPG
Sbjct: 431 GPAGGPG 437




158|SequenceR|795|786|NIELARPGSA

>sp|DGGGP_NATPD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IELARPGSA 10
+EL RPG+A
Sbjct: 8 VELLRPGNA 16


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IELARPGS 9
IEL PGS
Sbjct: 869 IELVEPGS 876


>sp|MAP2_PYRFU|METHIONINE aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IELARPG 8
I+LARPG
Sbjct: 21 IKLARPG 27


>sp|RL1_METTP|LARGE ribosomal subunit protein uL1|Methanothrix thermoacetophila

Query: 1 NIELARPGS 9
NI+L +PG+
Sbjct: 33 NIDLTQPGN 41




159|SequenceR|800|791|FSIMKNIELA

>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IMKNIEL 9
+MKNIEL
Sbjct: 304 LMKNIEL 310




160|SequenceR|805|796|HANRWFSIMK

>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 RWFSIMK 10
RWFSI K
Sbjct: 98 RWFSIPK 104


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 2 ANRWF 6
ANRWF
Sbjct: 149 ANRWF 153


>sp|RS3A_HALWD|SMALL ribosomal subunit protein eS1|Haloquadratum walsbyi (strain DSM

Query: 2 ANRWFSIM 9
++RW+SI+
Sbjct: 12 SDRWYSII 19


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ANRWFSI 8
AN+W+ I
Sbjct: 481 ANKWYGI 487




161|SequenceR|810|801|SSIRKHANRW

>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IRKHANRW 10
+RK A RW
Sbjct: 236 LRKRAERW 243


>sp|Y1656_ARCFU|UNCHARACTERIZED protein AF_1656|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SIRKHANRW 10
S+RK+ N W
Sbjct: 96 SLRKNVNDW 104


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 IRKHANRW 10
IR+H N W
Sbjct: 576 IRRHFNYW 583


>sp|RL15E_METMJ|LARGE ribosomal subunit protein eL15|Methanoculleus marisnigri (strain

Query: 2 SIRKHANR 9
SIR HANR
Sbjct: 187 SIRSHANR 194


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IRKHANRW 10
IR H N W
Sbjct: 576 IRSHFNYW 583


>sp|HMEC_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus fulgidus

Query: 4 RKHANRW 10
R+H N W
Sbjct: 274 RRHVNPW 280


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IRKHANRW 10
IR H N W
Sbjct: 576 IRSHFNYW 583


>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SSIRKHAN 8
S++RKH N
Sbjct: 339 SNLRKHRN 346


>sp|RL15E_METB6|LARGE ribosomal subunit protein eL15|Methanoregula boonei (strain DSM

Query: 2 SIRKHANR 9
SIR HAN+
Sbjct: 187 SIRSHANQ 194




162|SequenceR|815|806|WVVMQSSIRK

>sp|SFSA_SULTO|SUGAR fermentation stimulation protein homolog|Sulfurisphaera tokodaii

Query: 1 WVVMQSSI 8
WVV SSI
Sbjct: 73 WVVTDSSI 80


>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus

Query: 1 WVVMQSSI 8
WVV SSI
Sbjct: 78 WVVTDSSI 85


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 WVVMQSSIR 9
WV ++ SIR
Sbjct: 502 WVKLEQSIR 510




163|SequenceR|820|811|ASRPLWVVMQ

>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ASRPLWVVM 9
+SRP W+++
Sbjct: 201 SSRPEWMIL 209


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 1 ASRPLWV 7
ASRPL+V
Sbjct: 341 ASRPLYV 347


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 1 ASRPLWV 7
ASRPL+V
Sbjct: 341 ASRPLYV 347


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 SRPLWVVM 9
SRP W+++
Sbjct: 274 SRPEWMIL 281


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 SRPLWVVM 9
SRP W+++
Sbjct: 274 SRPEWMIL 281


>sp|WTPB_THEKO|MOLYBDATE/TUNGSTATE transport system permease protein|Thermococcus kodakarensis (strain

Query: 1 ASRPLWVVM 9
ASRP+ V+M
Sbjct: 219 ASRPIAVIM 227


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 2 SRPLWVVM 9
SRP W+++
Sbjct: 202 SRPEWMIL 209


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 2 SRPLWVVM 9
SRP W+++
Sbjct: 202 SRPEWMIL 209


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 SRPLWVVMQ 10
RP WV+ Q
Sbjct: 305 DRPFWVMEQ 313


>sp|NADM_PICTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 SRPLWV 7
S PLWV
Sbjct: 78 SNPLWV 83


>sp|HIS7_PYRCJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ASRPLWVV 8
RP WVV
Sbjct: 106 GGRPYWVV 113




164|SequenceR|825|816|VARPLASRPL

>sp|PSTB_METKA|PHOSPHATE import ATP-binding protein PstB|Methanopyrus kandleri (strain AV19

Query: 1 VARPLASRP 9
+AR LA RP
Sbjct: 159 IARALAMRP 167


>sp|DPCKG_METAC|GTP-DEPENDENT dephospho-CoA kinase|Methanosarcina acetivorans (strain ATCC

Query: 3 RPLASRPL 10
RPL RPL
Sbjct: 12 RPLMKRPL 19




165|SequenceR|830|821|DPHRIVARPL

>sp|RL23_THEGJ|LARGE ribosomal subunit protein uL23|Thermococcus gammatolerans (strain

Query: 1 DPHRIVARPL 10
DP++++ RPL
Sbjct: 2 DPYKVIIRPL 11


>sp|RL23_THEKO|LARGE ribosomal subunit protein uL23|Thermococcus kodakarensis (strain

Query: 1 DPHRIVARPL 10
DP++++ RPL
Sbjct: 2 DPYKVIIRPL 11


>sp|RL23_THESM|LARGE ribosomal subunit protein uL23|Thermococcus sibiricus (strain DSM

Query: 1 DPHRIVARPL 10
DP++++ RP+
Sbjct: 2 DPYKVIVRPV 11


>sp|RL23_PYRHO|LARGE ribosomal subunit protein uL23|Pyrococcus horikoshii (strain ATCC

Query: 1 DPHRIVARPL 10
DP++++ RP+
Sbjct: 2 DPYKVIIRPV 11


>sp|RL23_THEON|LARGE ribosomal subunit protein uL23|Thermococcus onnurineus (strain

Query: 1 DPHRIVARPL 10
DP++++ RP+
Sbjct: 2 DPYKVIIRPV 11


>sp|RL23_PYRAB|LARGE ribosomal subunit protein uL23|Pyrococcus abyssi (strain GE5 /

Query: 1 DPHRIVARPL 10
DP++++ RP+
Sbjct: 2 DPYKVIIRPV 11


>sp|RL23_PYRFU|LARGE ribosomal subunit protein uL23|Pyrococcus furiosus (strain ATCC

Query: 1 DPHRIVARPL 10
DP++++ RP+
Sbjct: 2 DPYKVIIRPV 11


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 1 DPHRIVARPL 10
DPHR RP+
Sbjct: 161 DPHRENERPM 170


>sp|SYS_CENSY|SERINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 DPHRIVARP 9
DPH + +RP
Sbjct: 3 DPHILRSRP 11


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 2 PHRIVARPL 10
PH+IVA+ L
Sbjct: 513 PHQIVAQQL 521


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 1 DPHRIVARP 9
DP+RIV P
Sbjct: 279 DPNRIVMDP 287


>sp|RNP1_HALMA|RIBONUCLEASE P protein component 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 DPHRIVARP 9
D R+VARP
Sbjct: 73 DGDRLVARP 81


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 DPHRIV 6
+PHRIV
Sbjct: 382 EPHRIV 387




166|SequenceR|835|826|GEEDYDPHRI

>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EEDYDPHRI 10
EE YDP +I
Sbjct: 163 EEKYDPAKI 171


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EEDYDPHRI 10
E+DY PH I
Sbjct: 2 EQDYKPHEI 10


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EEDYDPHRI 10
E+DY PH I
Sbjct: 2 EQDYKPHEI 10


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EEDYDPHRI 10
E+DY PH I
Sbjct: 2 EQDYKPHEI 10


>sp|PYRH_THEAC|URIDYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GEEDYDPHR 9
G D DPHR
Sbjct: 144 GVYDMDPHR 152


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GEEDYDPHRI 10
E+ Y PHRI
Sbjct: 6 AEKSYRPHRI 15


>sp|Y2000_PYRAB|UNCHARACTERIZED protein Orf2|Pyrococcus abyssi (strain GE5 /

Query: 1 GEEDYDPH 8
GE YDPH
Sbjct: 316 GEYRYDPH 323


>sp|APGM_PYRAE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 EDYDPHRI 10
D DPHR+
Sbjct: 164 SDTDPHRV 171


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 EDYDPHRI 10
EDYDP I
Sbjct: 8 EDYDPKEI 15


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 YDPHRI 10
YDP+RI
Sbjct: 130 YDPYRI 135


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EEDYDPHRI 10
EEDY HR+
Sbjct: 317 EEDYLRHRV 325


>sp|TRUA_ARCFU|TRNA pseudouridine synthase A|Archaeoglobus fulgidus (strain ATCC

Query: 3 EDYDPHR 9
ED+DP R
Sbjct: 93 EDFDPRR 99


>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 1 GEEDYDPHRI 10
G E Y P RI
Sbjct: 249 GLEKYSPERI 258


>sp|TYSY_HALVO|THYMIDYLATE synthase|Haloferax volcanii (Halobacterium volcanii)

Query: 1 GEEDYD 6
GEEDYD
Sbjct: 286 GEEDYD 291


>sp|FEN_METST|FLAP endonuclease 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GEEDYDPHR 9
GE D+D R
Sbjct: 299 GEHDFDERR 307


>sp|RS15_NATPD|SMALL ribosomal subunit protein uS15|Natronomonas pharaonis (strain

Query: 1 GEEDYDPHRI 10
EE YDP +I
Sbjct: 41 AEEGYDPSQI 50


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 DYDPHRI 10
+ DPHRI
Sbjct: 66 NIDPHRI 72


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 EEDYDPHRI 10
E D++P R+
Sbjct: 306 EHDFNPERV 314


>sp|FEN_META3|FLAP endonuclease 1|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EEDYDPHRI 10
E D+ P+RI
Sbjct: 294 ENDFSPNRI 302


>sp|ACAR_SULTO|ACRYLOYL-COENZYME A reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GEEDYDPHRI 10
GEE Y HR+
Sbjct: 99 GEEAYCHHRL 108


>sp|Y2219_SACI2|MEMO1 family protein LS215_2219|Saccharolobus islandicus (strain L.S.2.15

Query: 5 YDPHRI 10
YDPH I
Sbjct: 200 YDPHEI 205


>sp|Y066_SACS2|MEMO1 family protein SSO0066|Saccharolobus solfataricus (strain ATCC

Query: 5 YDPHRI 10
YDPH I
Sbjct: 200 YDPHEI 205


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GEEDYD 6
GE+DYD
Sbjct: 400 GEKDYD 405


>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GEEDYDPHRI 10
G+ Y PH++
Sbjct: 293 GQRAYTPHQL 302


>sp|Y739_SACI1|MEMO1 family protein YN1551_0739|Saccharolobus islandicus (strain

Query: 5 YDPHRI 10
YDPH I
Sbjct: 200 YDPHEI 205


>sp|Y2134_SACI3|MEMO1 family protein M1627_2134|Saccharolobus islandicus (strain M.16.27)

Query: 5 YDPHRI 10
YDPH I
Sbjct: 200 YDPHEI 205


>sp|Y2061_SACI6|MEMO1 family protein M164_2061|Saccharolobus islandicus (strain M.16.4 /

Query: 5 YDPHRI 10
YDPH I
Sbjct: 200 YDPHEI 205


>sp|Y2054_SACI4|MEMO1 family protein M1425_2054|Saccharolobus islandicus (strain M.14.25

Query: 5 YDPHRI 10
YDPH I
Sbjct: 200 YDPHEI 205


>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 5 YDPHRI 10
YDPH I
Sbjct: 200 YDPHEI 205


>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 EDYDPHRI 10
D DPH++
Sbjct: 164 SDTDPHKV 171


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GEEDYD 6
GE+DYD
Sbjct: 400 GEKDYD 405


>sp|APGM_PYRCJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 EDYDPHRI 10
D DPH++
Sbjct: 164 SDTDPHKV 171


>sp|APGM_PYRNV|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 EDYDPHRI 10
D DPH++
Sbjct: 164 SDTDPHKV 171


>sp|APGM_PYRIL|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 EDYDPHRI 10
D DPH++
Sbjct: 164 SDTDPHKV 171




167|SequenceR|840|831|IAGYLGEEDY

>sp|DUT_AERPE|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Aeropyrum pernix

Query: 2 AGYLGEED 9
AG+LGEED
Sbjct: 40 AGFLGEED 47


>sp|RS13_METMP|SMALL ribosomal subunit protein uS13|Methanococcus maripaludis (strain

Query: 2 AGYLGEED 9
AGYL +ED
Sbjct: 53 AGYLADED 60


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AGYLGEE 8
+GYLGEE
Sbjct: 532 SGYLGEE 538


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IAGYLGEEDY 10
I YLG+ED+
Sbjct: 368 IEAYLGDEDF 377


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 IAGYLGEEDY 10
I GYLGE Y
Sbjct: 781 IQGYLGERYY 790


>sp|SAT_NITMS|SULFATE adenylyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 IAGYLGEEDY 10
+ G+LG++D+
Sbjct: 50 LEGFLGQQDF 59


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 1 IAGYLGEEDY 10
I ++GEEDY
Sbjct: 70 IKRHMGEEDY 79


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 1 IAGYLGEEDY 10
I ++GEEDY
Sbjct: 70 IKRHMGEEDY 79


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IAGYLGEEDY 10
I ++GEEDY
Sbjct: 71 IKRHMGEEDY 80


>sp|RS13_METBU|SMALL ribosomal subunit protein uS13|Methanococcoides burtonii (strain

Query: 1 IAGYLGEED 9
+ GYL +ED
Sbjct: 52 VIGYLSDED 60


>sp|FUCA_METM5|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain C5 /

Query: 1 IAGYLGEED 9
I G+L EED
Sbjct: 42 ILGFLNEED 50


>sp|FEN_NATPD|FLAP endonuclease 1|Natronomonas pharaonis (strain ATCC 35678

Query: 2 AGYLGEEDY 10
A Y+G EDY
Sbjct: 170 ADYVGSEDY 178


>sp|RS8_STAMF|SMALL ribosomal subunit protein uS8|Staphylothermus marinus (strain

Query: 3 GYLGEEDY 10
GY+GE +Y
Sbjct: 45 GYIGEFEY 52


>sp|RS8_HYPBU|SMALL ribosomal subunit protein uS8|Hyperthermus butylicus (strain DSM

Query: 3 GYLGEEDY 10
GY+GE +Y
Sbjct: 45 GYIGEFEY 52


>sp|FUCA_METM7|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain C7 /

Query: 1 IAGYLGEED 9
I G+L EED
Sbjct: 42 ILGFLNEED 50


>sp|FUCA_METVS|L-FUCULOSE phosphate aldolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IAGYLGEED 9
I G+L EED
Sbjct: 42 ILGFLNEED 50


>sp|QUEC_METBU|7-CYANO-7-DEAZAGUANINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IAGYLGEE 8
IAG+ GEE
Sbjct: 129 IAGFNGEE 136


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19

Query: 1 IAGYLGEED 9
I GY GE D
Sbjct: 4 IVGYTGERD 12


>sp|FEN_METAR|FLAP endonuclease 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 AGYLGEEDY 10
A Y+G +DY
Sbjct: 165 ADYVGSQDY 173


>sp|PURO_NATPD|IMP cyclohydrolase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IAGYLGEEDY 10
IAG +G+E Y
Sbjct: 108 IAGVVGDESY 117


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IAGYLGEEDY 10
I Y+GEE++
Sbjct: 369 IEAYVGEENF 378


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IAGYLGEEDY 10
I Y+GEE++
Sbjct: 367 IEAYVGEENF 376


>sp|END4_METLZ|PROBABLE endonuclease 4|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 GYLGEE 8
GYLGEE
Sbjct: 236 GYLGEE 241


>sp|Y560_METJA|UNCHARACTERIZED protein MJ0560|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IAGYLGEED 9
I GY EED
Sbjct: 50 IKGYFQEED 58


>sp|AROC_AERPE|CHORISMATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 YLGEEDY 10
YLG +DY
Sbjct: 115 YLGHQDY 121


>sp|RS8_IGNH4|SMALL ribosomal subunit protein uS8|Ignicoccus hospitalis (strain

Query: 3 GYLGEEDY 10
GY+GE +Y
Sbjct: 45 GYVGEFEY 52


>sp|ARLY_SACS2|ARGININOSUCCINATE lyase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IAGYLGEE 8
+ GYLG+E
Sbjct: 43 LTGYLGKE 50


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 2 AGYLGEEDY 10
A Y+G +DY
Sbjct: 166 ADYIGSQDY 174


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 1 IAGYLGEEDY 10
I ++GE+DY
Sbjct: 70 IKRHMGEDDY 79


>sp|RS8_SACS2|SMALL ribosomal subunit protein uS8|Saccharolobus solfataricus (strain

Query: 3 GYLGEEDY 10
GY+GE +Y
Sbjct: 45 GYVGEFEY 52


>sp|RS8_SACI7|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 3 GYLGEEDY 10
GY+GE +Y
Sbjct: 45 GYVGEFEY 52


>sp|RS8_SACI6|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 3 GYLGEEDY 10
GY+GE +Y
Sbjct: 45 GYVGEFEY 52


>sp|RS8_SACI4|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 3 GYLGEEDY 10
GY+GE +Y
Sbjct: 45 GYVGEFEY 52


>sp|RS8_SACI3|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 3 GYLGEEDY 10
GY+GE +Y
Sbjct: 45 GYVGEFEY 52


>sp|RS8_SACI2|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 3 GYLGEEDY 10
GY+GE +Y
Sbjct: 45 GYVGEFEY 52


>sp|RS8_SACI1|SMALL ribosomal subunit protein uS8|Saccharolobus islandicus (strain

Query: 3 GYLGEEDY 10
GY+GE +Y
Sbjct: 45 GYVGEFEY 52


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IAGYLGEEDY 10
I ++GE+DY
Sbjct: 71 IKRHMGEDDY 80


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 1 IAGYLGE 7
IAGY+G+
Sbjct: 310 IAGYIGK 316


>sp|RS8_METTH|SMALL ribosomal subunit protein uS8|Methanothermobacter

Query: 3 GYLGEEDY 10
GY+GE +Y
Sbjct: 45 GYIGEFEY 52


>sp|RS13_METAC|SMALL ribosomal subunit protein uS13|Methanosarcina acetivorans (strain

Query: 1 IAGYLGEED 9
I GYL EE+
Sbjct: 66 ILGYLPEEE 74


>sp|RS8_METS5|SMALL ribosomal subunit protein uS8|Metallosphaera sedula (strain ATCC

Query: 3 GYLGEEDY 10
GY+GE +Y
Sbjct: 45 GYVGEFEY 52


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain ATCC

Query: 1 IAGYLGEEDY 10
+A YL EDY
Sbjct: 567 VANYLLPEDY 576


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IAGYLG 6
+AGYLG
Sbjct: 430 VAGYLG 435




168|SequenceR|845|836|VVQPLIAGYL

>sp|Y114_METTH|UNCHARACTERIZED protein MTH_114|Methanothermobacter thermautotrophicus (strain

Query: 3 QPLIAGY 9
+PL+AGY
Sbjct: 58 EPLLAGY 64


>sp|SPT5_SACS2|TRANSCRIPTION elongation factor Spt5|Saccharolobus solfataricus (strain ATCC

Query: 1 VVQPLIAG 8
+V+PLIAG
Sbjct: 60 IVKPLIAG 67


>sp|PSB_HALVD|PROTEASOME subunit beta|Haloferax volcanii (strain ATCC 29605

Query: 1 VVQPLIAG 8
VVQP++ G
Sbjct: 143 VVQPILGG 150


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VQPLIAGYL 10
+QPL GY+
Sbjct: 141 LQPLFQGYV 149


>sp|NADE_METBU|NH(3)-DEPENDENT NAD(+) synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VVQPLIAG 8
V+QP++AG
Sbjct: 208 VLQPILAG 215


>sp|PSB2_SACS2|PROTEASOME subunit beta 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VVQPLIAGY 9
+VQ LI GY
Sbjct: 110 IVQILIGGY 118


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVQPLIAGY 9
V PL++GY
Sbjct: 63 VEDPLVSGY 71


>sp|PSB2_SACS9|PROTEASOME subunit beta 2|Saccharolobus solfataricus (strain 98/2) (Sulfolobus

Query: 1 VVQPLIAGY 9
+VQ LI GY
Sbjct: 113 IVQILIGGY 121


>sp|PSB2_SACI1|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VVQPLIAGY 9
+VQ LI GY
Sbjct: 113 IVQILIGGY 121


>sp|PSB1_SACI9|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain L.D.8.5 /

Query: 1 VVQPLIAGY 9
+VQ LI GY
Sbjct: 113 IVQILIGGY 121


>sp|PSB1_SACI7|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VVQPLIAGY 9
+VQ LI GY
Sbjct: 113 IVQILIGGY 121


>sp|PSB1_SACI6|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VVQPLIAGY 9
+VQ LI GY
Sbjct: 113 IVQILIGGY 121


>sp|PSB1_SACI4|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VVQPLIAGY 9
+VQ LI GY
Sbjct: 113 IVQILIGGY 121


>sp|PSB1_SACI3|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.16.27)

Query: 1 VVQPLIAGY 9
+VQ LI GY
Sbjct: 113 IVQILIGGY 121


>sp|PSB1_SACI2|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VVQPLIAGY 9
+VQ LI GY
Sbjct: 113 IVQILIGGY 121


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 2 VQPLIAGYL 10
++P++A YL
Sbjct: 97 IKPIVASYL 105




169|SequenceR|850|841|ITGATVVQPL

>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 1 ITGATVVQPL 10
+ GAT+V+PL
Sbjct: 434 VRGATIVRPL 443


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ITGATVVQP 9
ITG +VQP
Sbjct: 388 ITGKGIVQP 396


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ITGATVVQP 9
+TG +VQP
Sbjct: 270 VTGKGIVQP 278


>sp|RS27_THEKO|SMALL ribosomal subunit protein eS27|Thermococcus kodakarensis (strain

Query: 1 ITGATVVQP 9
+ GAT+V+P
Sbjct: 41 VCGATLVEP 49


>sp|RS27_THEON|SMALL ribosomal subunit protein eS27|Thermococcus onnurineus (strain

Query: 1 ITGATVVQP 9
+ GAT+V+P
Sbjct: 41 VCGATLVEP 49


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 ITGATVVQPL 10
+TGA VVQ +
Sbjct: 133 VTGAAVVQAI 142


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 ITGATVVQPL 10
+TGA VVQ +
Sbjct: 133 VTGAAVVQAI 142


>sp|HMDH_ARCFU|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ITGATVVQPL 10
I GAT V PL
Sbjct: 337 IGGATKVNPL 346




170|SequenceR|855|846|VARRTITGAT

>sp|TRMY_THEON|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus onnurineus

Query: 1 VARRTITGAT 10
+ RRT+ GAT
Sbjct: 122 IIRRTLKGAT 131


>sp|NDK_METPE|NUCLEOSIDE diphosphate kinase|Methanosphaerula palustris (strain ATCC

Query: 4 RTITGAT 10
RT+TGAT
Sbjct: 85 RTLTGAT 91




171|SequenceR|860|851|LWTPEVARRT

>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LWTPEVARRT 10
+WTP V R T
Sbjct: 276 VWTPHVFRDT 285


>sp|SYFA_SULAC|PHENYLALANINE--TRNA ligase alpha subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WTPEVARR 9
W P++A+R
Sbjct: 294 WDPQIAKR 301


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LWTPEVAR 8
L+TP+VAR
Sbjct: 17 LFTPQVAR 24


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 WTPEVARR 9
W+PEVA R
Sbjct: 317 WSPEVASR 324


>sp|GAL1_THEKO|GALACTOKINASE kodakarensis (strain ATCC BAA-918

Query: 2 WTPEV 6
WTPEV
Sbjct: 334 WTPEV 338


>sp|RLSX_METTH|FUSED uL13/uS9 ribosomal subunit protein|Methanothermobacter

Query: 1 LWTPEVAR 8
L+TPE+AR
Sbjct: 185 LYTPELAR 192


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LWTPEVARRT 10
+WTP V + T
Sbjct: 276 VWTPHVFKDT 285


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LWTPEV 6
LWTP V
Sbjct: 144 LWTPSV 149


>sp|PUR8_ARCFU|ADENYLOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LWTPEVAR 8
LW EVAR
Sbjct: 160 LWAAEVAR 167


>sp|TFE_METKA|TRANSCRIPTION factor E|Methanopyrus kandleri (strain AV19 /

Query: 4 PEVARRT 10
PEVA+RT
Sbjct: 29 PEVAKRT 35


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WTPEVAR 8
W+P VAR
Sbjct: 83 WSPGVAR 89


>sp|DPM1L_HALVD|DOLICHYL-PHOSPHATE hexose transferase HVO_1613|Haloferax volcanii (strain ATCC 29605

Query: 3 TPEVARR 9
TPE+AR+
Sbjct: 49 TPEIARK 55


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WTPEVAR 8
WTPE R
Sbjct: 370 WTPEYMR 376


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LWTPEVARRT 10
WT + +RRT
Sbjct: 29 FWTRDASRRT 38




172|SequenceR|865|856|ANSATLWTPE

>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 5 TLWTPE 10
T+W+PE
Sbjct: 373 TMWSPE 378


>sp|PEPQ_PYRHO|XAA-PRO dipeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 SATLWTPE 10
SATL+ PE
Sbjct: 51 SATLYVPE 58


>sp|RL18E_PYRAE|LARGE ribosomal subunit protein eL18|Pyrobaculum aerophilum (strain

Query: 1 ANSATLW 7
ANSA++W
Sbjct: 26 ANSASIW 32


>sp|HERA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 2 NSATLW 7
NSA+LW
Sbjct: 386 NSASLW 391


>sp|RRP4_PICTO|EXOSOME complex component Rrp4|Picrophilus torridus (strain ATCC 700027

Query: 3 SATLWT 8
SAT+WT
Sbjct: 71 SATMWT 76


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 NSATLWTP 9
N+AT W P
Sbjct: 539 NAATEWIP 546


>sp|RL14_CENSY|LARGE ribosomal subunit protein uL14|Cenarchaeum symbiosum (strain A)

Query: 2 NSATLWTPE 10
N+A L TPE
Sbjct: 105 NAAVLTTPE 113


>sp|CAH_METTT|CARBONIC anhydrase|Methanosarcina thermophila (strain ATCC 43570

Query: 2 NSATLWTPE 10
N T W PE
Sbjct: 48 NPVTPWNPE 56




173|SequenceR|870|861|VRDPRANSAT

>sp|LIPA_SACS2|LIPOYL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VRDPRAN 7
VRDPRA+
Sbjct: 167 VRDPRAS 173


>sp|LIPA_PICTO|LIPOYL synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 VRDPRA 6
VRDPRA
Sbjct: 168 VRDPRA 173


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 2 RDPRANSAT 10
R PR+N AT
Sbjct: 703 RTPRSNPAT 711




174|SequenceR|875|866|KLESGVRDPR

>sp|RADA_NANEQ|DNA repair and recombination protein|Nanoarchaeum equitans (strain

Query: 3 ESGVRDP 9
E G+RDP
Sbjct: 318 EEGIRDP 324


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter

Query: 2 LESGVRDPR 10
+E+G+ DPR
Sbjct: 42 IENGLMDPR 50


>sp|RL11_METTH|LARGE ribosomal subunit protein uL11|Methanothermobacter

Query: 1 KLESGVRDP 9
KLE G +DP
Sbjct: 82 KLEKGSQDP 90


>sp|PIMT_METB6|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanoregula boonei (strain DSM 21154

Query: 5 GVRDPR 10
G+RDPR
Sbjct: 23 GIRDPR 28


>sp|TOP6A_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 2 LESGVRDPR 10
LES + DPR
Sbjct: 312 LESELEDPR 320


>sp|Y476_AERPE|UPF0215 protein APE_0476.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 KLESGVRDPR 10
+LESG+R R
Sbjct: 103 RLESGLRSSR 112


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain

Query: 2 LESGVRDPR 10
+E GV DP+
Sbjct: 40 IEGGVMDPK 48


>sp|TOP6A_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 2 LESGVRDPR 10
LES + DPR
Sbjct: 310 LESELEDPR 318


>sp|TOP6A_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 2 LESGVRDPR 10
LES + DPR
Sbjct: 310 LESELEDPR 318


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLESGVRDPR 10
K E GVR+ R
Sbjct: 594 KAEEGVREAR 603


>sp|TRPC_METTH|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 3 ESGVRDP 9
ESGVR P
Sbjct: 209 ESGVRGP 215




175|SequenceR|880|871|AQVMAKLESG

>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 2 QVMAKLE 8
QVMAK+E
Sbjct: 400 QVMAKIE 406


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VMAKLESG 10
VMAKLES
Sbjct: 158 VMAKLESA 165


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VMAKLESG 10
VMAKLES
Sbjct: 158 VMAKLESA 165




176|SequenceR|885|876|TYGPPAQVMA

>sp|RL1_METTL|LARGE ribosomal subunit protein uL1|Methanothermococcus

Query: 1 TYGPPAQV 8
T GPPAQ+
Sbjct: 204 TMGPPAQI 211


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 YGPPA 6
YGPPA
Sbjct: 327 YGPPA 331


>sp|RADB_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 2 YGPPA 6
YGPPA
Sbjct: 32 YGPPA 36


>sp|RADB_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 2 YGPPA 6
YGPPA
Sbjct: 32 YGPPA 36


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TYGPPAQVM 9
TYG PAQ M
Sbjct: 70 TYGIPAQPM 78


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YGPPAQVMA 10
Y PP Q+ A
Sbjct: 512 YSPPEQIEA 520


>sp|RL1_STAMF|LARGE ribosomal subunit protein uL1|Staphylothermus marinus (strain ATCC

Query: 1 TYGPPAQVMA 10
T GPP +VM
Sbjct: 206 TMGPPIEVMG 215


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC

Query: 1 TYGPPAQVMA 10
T+GPP V A
Sbjct: 79 THGPPNDVNA 88




177|SequenceR|890|881|DAGVLTYGPP

>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 2 AGVLTYGPP 10
+GVL YGPP
Sbjct: 185 SGVLLYGPP 193


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 2 AGVLTYGPP 10
AGVL YGPP
Sbjct: 497 AGVLLYGPP 505


Query: 3 GVLTYGPP 10
GVL +GPP
Sbjct: 225 GVLLHGPP 232


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 170 GVLLYGPP 177


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 170 GVLLYGPP 177


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 170 GVLLYGPP 177


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 170 GVLLYGPP 177


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 170 GVLLYGPP 177


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 170 GVLLYGPP 177


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 187 GVLLYGPP 194


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 184 GVLLYGPP 191


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 184 GVLLYGPP 191


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 184 GVLLYGPP 191


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 215 GVLLYGPP 222


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 170 GVLLYGPP 177


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 184 GVLLYGPP 191


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GVLTYGPP 10
G+L YGPP
Sbjct: 139 GILVYGPP 146


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 189 GVLLYGPP 196


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 184 GVLLYGPP 191


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 175 GVLLYGPP 182


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 2 AGVLTYGPP 10
+GVL YGPP
Sbjct: 187 SGVLLYGPP 195


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 214 GVLLYGPP 221


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 195 GVLLYGPP 202


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 173 GVLLYGPP 180


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 189 GVLLYGPP 196


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 173 GVLLYGPP 180


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GVLTYGPP 10
G+L YGPP
Sbjct: 206 GILLYGPP 213


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 176 GVLLYGPP 183


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 174 GVLLYGPP 181


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 170 GVLLYGPP 177


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 174 GVLLYGPP 181


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 177 GVLLYGPP 184


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GVLTYGPP 10
GVL YGPP
Sbjct: 218 GVLLYGPP 225


Query: 3 GVLTYGPP 10
G+L +GPP
Sbjct: 491 GILLFGPP 498


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GVLTYGPP 10
G+L YGPP
Sbjct: 248 GILLYGPP 255


Query: 3 GVLTYGPP 10
G+L +GPP
Sbjct: 523 GILLFGPP 530


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 AGVLTYGPP 10
+GVL +GPP
Sbjct: 183 SGVLLHGPP 191


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GVLTYGPP 10
GV+ YGPP
Sbjct: 226 GVILYGPP 233


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 3 GVLTYGPP 10
GVL +GPP
Sbjct: 488 GVLLFGPP 495


Query: 3 GVLTYGPP 10
GVL GPP
Sbjct: 215 GVLLVGPP 222


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 GVLTYGPP 10
GVL +GPP
Sbjct: 189 GVLLHGPP 196


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AGVLTYGPP 10
AG+ TY PP
Sbjct: 162 AGINTYAPP 170


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 AGVLTYGPP 10
AG+ TY PP
Sbjct: 164 AGINTYAPP 172


>sp|GGR_PYRHO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AGVLTYGPP 10
AG+ TY PP
Sbjct: 162 AGIDTYAPP 170


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 AGVLTYGPP 10
AG+ TY PP
Sbjct: 164 AGINTYAPP 172


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 AGVLTYGPP 10
AG+ TY PP
Sbjct: 162 AGINTYAPP 170


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 AGVLTYGPP 10
+GVL +GPP
Sbjct: 187 SGVLLHGPP 195


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 DAGVLTYGP 9
DAGVL GP
Sbjct: 439 DAGVLVEGP 447


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GVLTYGPP 10
GVL +GPP
Sbjct: 175 GVLLHGPP 182


>sp|SCAF_METJA|DUF35 domain-containing scaffold protein|Methanocaldococcus jannaschii

Query: 1 DAGVLTYG 8
D GV+TYG
Sbjct: 126 DDGVITYG 133


>sp|LYSK_SULAC|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GVLTYGP 9
G+L YGP
Sbjct: 304 GILAYGP 310


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DAGVLTYGPP 10
DAG TYG P
Sbjct: 65 DAGQATYGIP 74


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 GVLTYGP 9
GV++YGP
Sbjct: 87 GVISYGP 93


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 1 DAGVLTYG 8
D G++TYG
Sbjct: 292 DTGLITYG 299


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 1 DAGVLTYG 8
D G++TYG
Sbjct: 292 DTGLITYG 299


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 DAGVLTYG 8
D G++TYG
Sbjct: 292 DTGMITYG 299


>sp|Y882_METJA|PROBABLE S-adenosylmethionine-dependent methyltransferase

Query: 1 DAGVLTYG 8
D+GV +YG
Sbjct: 31 DSGVFSYG 38


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GVLTYGPP 10
GVL YG P
Sbjct: 195 GVLLYGLP 202


>sp|CYNS_SULTO|CYANATE hydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GVLTYGP 9
GVL YGP
Sbjct: 93 GVLLYGP 99


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GVLTYGPP 10
GVL YG P
Sbjct: 195 GVLLYGLP 202


>sp|TRUA_ARCFU|TRNA pseudouridine synthase A|Archaeoglobus fulgidus (strain ATCC

Query: 1 DAGVLTYG 8
DAGV YG
Sbjct: 52 DAGVHAYG 59


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 2 AGVLTYGPP 10
+G LT+G P
Sbjct: 158 SGALTHGAP 166


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 2 AGVLTYGPP 10
+G LT+G P
Sbjct: 158 SGALTHGAP 166


>sp|MCRD_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 4 VLTYGP 9
V+TYGP
Sbjct: 45 VITYGP 50


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 2 AGVLTYGPP 10
+G LT+G P
Sbjct: 158 SGALTHGAP 166


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 AGVLTYGPP 10
+G LT+G P
Sbjct: 151 SGTLTFGSP 159


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GVLTYGPP 10
GVL + PP
Sbjct: 226 GVLVFSPP 233


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 AGVLTYGPP 10
+G LT+G P
Sbjct: 158 SGALTHGAP 166


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 AGVLTYGPP 10
+G LT+G P
Sbjct: 161 SGALTHGAP 169


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DAGVLTYGP 9
D G + YGP
Sbjct: 211 DVGHMRYGP 219


>sp|UPP_METTH|URACIL phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 DAGVLTYGPP 10
DAG L +G P
Sbjct: 204 DAGDLAFGRP 213


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 DAGVLTYG 8
D G+ TYG
Sbjct: 295 DTGLATYG 302


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DAGVLTYG 8
D G+ TYG
Sbjct: 295 DTGLATYG 302


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 DAGVLTYG 8
D G+ TYG
Sbjct: 292 DTGLATYG 299


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 2 AGVLTYGPP 10
+G LT+G P
Sbjct: 158 SGALTHGAP 166


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 2 AGVLTYG 8
AGVLT+G
Sbjct: 128 AGVLTWG 134


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 AGVLTYGPP 10
+G LT+G P
Sbjct: 151 SGTLTFGSP 159


>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DAGVLTYG 8
+AG+LTY
Sbjct: 106 NAGILTYA 113


>sp|ARCH_THEAC|PROTEIN archease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DAGVLTYG 8
D GV+ YG
Sbjct: 19 DIGVIVYG 26


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AGVLTYGPP 10
GVL YG P
Sbjct: 190 GGVLIYGIP 198


>sp|DPCKG_METPE|GTP-DEPENDENT dephospho-CoA kinase|Methanosphaerula palustris (strain ATCC

Query: 1 DAGVLTYGPP 10
D G L YG P
Sbjct: 125 DGGFLLYGQP 134


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DAGVLTYGP 9
D G + YGP
Sbjct: 217 DVGHMRYGP 225


>sp|IF6_HALS3|TRANSLATION initiation factor 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 DAGVLTYGPP 10
D G + YG P
Sbjct: 176 DVGTVNYGAP 185




178|SequenceR|895|886|EQSDVDAGVL

>sp|PGP_PYRNV|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 SDVDAGVL 10
SDVDAG+L
Sbjct: 175 SDVDAGML 182


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 1 EQSDVDAGVL 10
EQSD+D+ ++
Sbjct: 143 EQSDIDSSII 152


>sp|RS3_META3|SMALL ribosomal subunit protein uS3|Methanococcus aeolicus (strain ATCC

Query: 1 EQSDVDAGVL 10
E D+DAGV+
Sbjct: 85 ESPDLDAGVV 94


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 3 SDVDAGVL 10
SD+DAG L
Sbjct: 85 SDIDAGFL 92


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 EQSDVDAG 8
EQS+ DAG
Sbjct: 83 EQSETDAG 90


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 EQSDVDAG 8
EQS+ DAG
Sbjct: 83 EQSETDAG 90


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 EQSDVDAGVL 10
+ SD+++GVL
Sbjct: 929 DTSDINSGVL 938


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QSDVDAGVL 10
++DVD GVL
Sbjct: 96 KADVDVGVL 104


>sp|RL11_METS3|LARGE ribosomal subunit protein uL11|Methanobrevibacter smithii (strain

Query: 2 QSDVDAG 8
Q DVDAG
Sbjct: 146 QKDVDAG 152




179|SequenceR|900|891|AAIWLEQSDV

>sp|Y1314_PYRHO|UPF0128 protein PH1314|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IWLEQSDV 10
+WLE+ DV
Sbjct: 97 VWLEEEDV 104


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 4 WLEQSDV 10
WLE SDV
Sbjct: 189 WLEDSDV 195


>sp|PSTB_METBF|PHOSPHATE import ATP-binding protein PstB|Methanosarcina barkeri (strain

Query: 1 AAIWLEQSD 9
AAIW E SD
Sbjct: 138 AAIWDEVSD 146


>sp|MOAC_METLZ|PROBABLE cyclic pyranopterin monophosphate synthase|Methanocorpusculum

Query: 3 IWLEQSD 9
IW EQ+D
Sbjct: 86 IWFEQTD 92


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 IWLEQSDV 10
+W+E SD+
Sbjct: 326 VWVESSDL 333




180|SequenceR|905|896|ADGLVAAIWL

>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DGLVAAIW 9
DGL+ A W
Sbjct: 408 DGLITAFW 415


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ADGLVAAIWL 10
+DGLVAAI L
Sbjct: 118 SDGLVAAIGL 127


>sp|Y2423_ARCFU|UNCHARACTERIZED protein AF_2423|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DGLVAAIWL 10
DGL+A WL
Sbjct: 112 DGLLAVTWL 120


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 3 GLVAAIW 9
GL+A IW
Sbjct: 174 GLIAIIW 180


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ADGLVAAIW 9
DGL+ +W
Sbjct: 195 GDGLIPDVW 203


>sp|HMGCS_PYRAE|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ADGLVAAIWL 10
++GLVAAI L
Sbjct: 118 SEGLVAAIGL 127


>sp|HMGCS_PYRAR|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ADGLVAAIWL 10
++GLVAAI L
Sbjct: 117 SEGLVAAIGL 126


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ADGLVAAIWL 10
ADG + W+
Sbjct: 225 ADGFIVGTWV 234


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 1 ADGLVAAIWL 10
ADG + W+
Sbjct: 222 ADGFIVGTWV 231


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 2 DGLVAAIW 9
DG + AIW
Sbjct: 182 DGALEAIW 189


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 1 ADGLVAAIW 9
A+G+V IW
Sbjct: 154 AEGVVDGIW 162


>sp|Y1115_METJA|UNCHARACTERIZED protein MJ1115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ADGLVAAIWL 10
ADG + W+
Sbjct: 224 ADGFIIGTWI 233




181|SequenceR|910|901|MGAFHADGLV

>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MGAFHADGLV 10
M FH +GLV
Sbjct: 909 MSEFHREGLV 918


>sp|Y1587_METJA|UNCHARACTERIZED protein MJ1587|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AFHADGLV 10
A+H DG+V
Sbjct: 141 AYHRDGIV 148


>sp|PYRB_METTH|ASPARTATE carbamoyltransferase catalytic subunit|Methanothermobacter

Query: 2 GAFHADG 8
GA+H DG
Sbjct: 243 GAYHIDG 249


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 MGAFHADG 8
+GAFH G
Sbjct: 452 VGAFHGKG 459


>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GAFHADGLV 10
G+ H DG++
Sbjct: 344 GSHHTDGII 352


>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GAFHADGLV 10
G+ H DG++
Sbjct: 344 GSHHTDGII 352


>sp|PROA_METAC|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GAFHADGLV 10
G+ H DG++
Sbjct: 344 GSHHTDGII 352


>sp|COBS_METKA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 GAFHADGLV 10
GA H DGLV
Sbjct: 73 GAQHFDGLV 81


>sp|CBIA_METTH|COBYRINATE a,c-diamide synthase|Methanothermobacter thermautotrophicus (strain

Query: 4 FHADG 8
FHADG
Sbjct: 318 FHADG 322


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MGAFHADGLV 10
+GA H +G+V
Sbjct: 216 VGAGHVEGIV 225




182|SequenceR|915|906|ATCGHMGAFH

>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 CGHMGAFH 10
CGH+G H
Sbjct: 718 CGHVGPEH 725


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 CGHMGAFH 10
CGH+G H
Sbjct: 706 CGHVGPEH 713


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 CGHMGAFH 10
CGH+G H
Sbjct: 709 CGHVGPEH 716


>sp|COFE_HALSA|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TCGHMG 7
TCGH+G
Sbjct: 102 TCGHVG 107


>sp|COFE_HALS3|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 TCGHMG 7
TCGH+G
Sbjct: 102 TCGHVG 107


>sp|TRPG_METTH|ANTHRANILATE synthase component 2|Methanothermobacter thermautotrophicus

Query: 4 GHMGAFH 10
GH G FH
Sbjct: 91 GHQGIFH 97


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ATCGHM 6
ATC HM
Sbjct: 64 ATCAHM 69


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 TCGHMGAFH 10
TC MGA H
Sbjct: 143 TCFTMGAHH 151


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TCGHMGAFH 10
TC MGA H
Sbjct: 135 TCFTMGAHH 143


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 TCGHMGAFH 10
TC MGA H
Sbjct: 143 TCFTMGAHH 151


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 TCGHMGAFH 10
TC MGA H
Sbjct: 143 TCFTMGAHH 151


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 TCGHMGAFH 10
TC MGA H
Sbjct: 143 TCFTMGAHH 151


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 TCGHMGAFH 10
TC MGA H
Sbjct: 143 TCFTMGAHH 151


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ATCGHMG 7
+ CGH+G
Sbjct: 295 SECGHLG 301


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 3 CGHMGAFH 10
CGH G H
Sbjct: 590 CGHDGVTH 597


>sp|TRPA_METKA|TRYPTOPHAN synthase alpha chain|Methanopyrus kandleri (strain AV19 /

Query: 2 TCGHMG 7
TCGH G
Sbjct: 26 TCGHPG 31


>sp|Y483_ARCFU|UNCHARACTERIZED protein AF_0483|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CGHMGAF 9
CG++G+F
Sbjct: 31 CGYVGSF 37


>sp|RL11_METKA|LARGE ribosomal subunit protein uL11|Methanopyrus kandleri (strain AV19 /

Query: 1 ATCGHMG 7
TCG MG
Sbjct: 128 GTCGSMG 134


>sp|RL11_METJA|LARGE ribosomal subunit protein uL11|Methanocaldococcus jannaschii

Query: 1 ATCGHMG 7
TCG MG
Sbjct: 128 GTCGSMG 134


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain

Query: 4 GHMGAFH 10
GH G FH
Sbjct: 91 GHQGIFH 97


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 3 CGHMGAFH 10
CGH FH
Sbjct: 254 CGHREIFH 261


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CGHMG 7
CGH+G
Sbjct: 707 CGHVG 711




183|SequenceR|920|911|TMWGFATCGH

>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 1 TMWGFATC 8
T W F TC
Sbjct: 403 TTWNFPTC 410


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 5 FATCGH 10
FATC H
Sbjct: 63 FATCAH 68


>sp|Y730_METJA|UNCHARACTERIZED protein MJ0730|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WGFATCG 9
WG CG
Sbjct: 6 WGITGCG 12


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 2 MWGFATCGH 10
+W CGH
Sbjct: 543 VWVCGNCGH 551




184|SequenceR|925|916|KRGQLTMWGF

>sp|HEM1_CALMQ|GLUTAMYL-TRNA reductase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 GQLTMWGF 10
G+LT WG
Sbjct: 327 GELTKWGL 334


>sp|BACH_NATPH|HALORHODOPSIN pharaonis (Natronobacterium pharaonis)

Query: 3 GQLTMWG 9
G +TMWG
Sbjct: 116 GVVTMWG 122


>sp|SSB_SACS2|SINGLE-STRANDED DNA binding protein Ssb|Saccharolobus solfataricus (strain ATCC

Query: 2 RGQLTMWG 9
R +LT+WG
Sbjct: 50 RVKLTLWG 57




185|SequenceR|930|921|DTGRSKRGQL

>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DTGRSKRGQ 9
D GRS RG+
Sbjct: 108 DLGRSNRGE 116


>sp|RL7A_METTP|LARGE ribosomal subunit protein eL8|Methanothrix thermoacetophila

Query: 1 DTGRSKRG 8
DTGR K+G
Sbjct: 28 DTGRIKKG 35


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain DSM

Query: 2 TGRSKRG 8
TGR+KRG
Sbjct: 214 TGRAKRG 220


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 2 TGRSKRG 8
TGR+KRG
Sbjct: 211 TGRAKRG 217


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 2 TGRSKRG 8
TGR+KRG
Sbjct: 211 TGRAKRG 217


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM 4184

Query: 2 TGRSKRG 8
TGR+KRG
Sbjct: 211 TGRAKRG 217


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 2 TGRSKRG 8
TGR+KRG
Sbjct: 211 TGRAKRG 217


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 2 TGRSKRG 8
TGR+KRG
Sbjct: 211 TGRAKRG 217


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TGRSKRGQL 10
TG +KRG+L
Sbjct: 362 TGVAKRGEL 370


>sp|RPO10_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo10|Picrophilus torridus (strain ATCC

Query: 1 DTGRSKRGQ 9
+TGR RG+
Sbjct: 31 ETGREPRGE 39


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TGRSKRGQ 9
TG+ KRG+
Sbjct: 346 TGKGKRGR 353


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 2 TGRSKRG 8
TGR KRG
Sbjct: 212 TGRVKRG 218


>sp|FLPA_HALWD|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloquadratum walsbyi (strain

Query: 1 DTGRSKRGQL 10
D GRSK G +
Sbjct: 43 DAGRSKLGAM 52


>sp|RL7A_METBF|LARGE ribosomal subunit protein eL8|Methanosarcina barkeri (strain

Query: 1 DTGRSKRG 8
DTG+ K+G
Sbjct: 26 DTGKIKKG 33


>sp|RL7A_METAC|LARGE ribosomal subunit protein eL8|Methanosarcina acetivorans (strain

Query: 1 DTGRSKRG 8
DTG+ K+G
Sbjct: 26 DTGKIKKG 33


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 2 TGRSKRGQ 9
TG+ KRG+
Sbjct: 346 TGKGKRGR 353


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 1 DTGRSKRGQL 10
D G +RGQ+
Sbjct: 36 DNGEKRRGQV 45


>sp|RL7A_METMA|LARGE ribosomal subunit protein eL8|Methanosarcina mazei (strain ATCC

Query: 1 DTGRSKRG 8
DTG+ K+G
Sbjct: 26 DTGKIKKG 33




186|SequenceR|935|926|TKSHLDTGRS

>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 3 SHLDTGRS 10
+H DTGR+
Sbjct: 129 THFDTGRA 136


>sp|Y1005_METKA|PUTATIVE HTH-type transcriptional regulatory protein|Methanopyrus kandleri

Query: 1 TKSHLDTGR 9
T H+DTGR
Sbjct: 167 TPEHVDTGR 175


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KSHLDTGR 9
KSH+D G+
Sbjct: 158 KSHVDLGQ 165


>sp|HIS7_METST|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 KSHLDTG 8
+SH+DTG
Sbjct: 28 ESHIDTG 34


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TKSHLDTG 8
T+ HLD G
Sbjct: 468 TRDHLDAG 475


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TKSHLDTG 8
T+ HLD G
Sbjct: 468 TRDHLDAG 475




187|SequenceR|940|931|GVTTATKSHL

>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 2 VTTATKSHL 10
VTTATK+ L
Sbjct: 216 VTTATKNIL 224


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GVTTATKSHL 10
GV+ TK H+
Sbjct: 292 GVSPVTKDHI 301


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GVTTATKSHL 10
GV+ TK H+
Sbjct: 292 GVSPVTKDHI 301




188|SequenceR|945|936|HERSIGVTTA

>sp|Y832_PYRAB|UPF0128 protein PYRAB08320|Pyrococcus abyssi (strain GE5 /

Query: 1 HERSIGVTT 9
H R+IG+TT
Sbjct: 129 HVRAIGLTT 137


>sp|Y1314_PYRHO|UPF0128 protein PH1314|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HERSIGVTT 9
H R++G+TT
Sbjct: 132 HVRAVGLTT 140


>sp|Y1488_PYRFU|UPF0128 protein PF1488|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HERSIGVTT 9
H R++G+TT
Sbjct: 129 HVRAVGLTT 137


>sp|RLME_METBU|RIBOSOMAL RNA large subunit methyltransferase|Methanococcoides burtonii

Query: 1 HERSIGVTTA 10
H RSI +TT+
Sbjct: 122 HARSIDLTTS 131


>sp|RLME_METAC|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina acetivorans

Query: 1 HERSIGVTTA 10
H RSI +TT+
Sbjct: 122 HARSIELTTS 131




189|SequenceR|950|941|NFIKAHERSI

>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 NFIKAHERS 9
N+IK HER+
Sbjct: 273 NYIKIHERA 281


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 KAHERSI 10
+AHERS+
Sbjct: 187 RAHERSV 193


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KAHERSI 10
+AHERS+
Sbjct: 186 RAHERSV 192


>sp|FENR_METS5|FERREDOXIN--NADP reductase|Metallosphaera sedula (strain ATCC 51363

Query: 4 KAHERSI 10
+AHERS+
Sbjct: 187 RAHERSV 193


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 KAHERSI 10
+AHERS+
Sbjct: 182 RAHERSV 188


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NFIKAHERSI 10
NF K H R I
Sbjct: 367 NFTKKHAREI 376


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NFIKAHER 8
NFI+ HE+
Sbjct: 12 NFIEEHEK 19


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 3 IKAHERSI 10
IKAHE I
Sbjct: 101 IKAHENGI 108


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NFIKAHERSI 10
NFI AH + +
Sbjct: 618 NFIMAHSKEV 627




190|SequenceR|955|946|YIRGYNFIKA

>sp|AMZA_SACS2|ARCHAEMETZINCIN solfataricus (strain ATCC 35092

Query: 1 YIRGYNFI 8
YI GYNF+
Sbjct: 84 YIDGYNFV 91


>sp|AMZA_SACI7|ARCHAEMETZINCIN islandicus (strain Y.G.57.14 /

Query: 1 YIRGYNFI 8
YI GYNF+
Sbjct: 84 YIDGYNFV 91


>sp|AMZA_SACI6|ARCHAEMETZINCIN islandicus (strain M.16.4 /

Query: 1 YIRGYNFI 8
YI GYNF+
Sbjct: 84 YIDGYNFV 91


>sp|AMZA_SACI4|ARCHAEMETZINCIN islandicus (strain M.14.25 /

Query: 1 YIRGYNFI 8
YI GYNF+
Sbjct: 84 YIDGYNFV 91


>sp|AMZA_SACI3|ARCHAEMETZINCIN islandicus (strain M.16.27) (Sulfolobus

Query: 1 YIRGYNFI 8
YI GYNF+
Sbjct: 84 YIDGYNFV 91


>sp|AMZA_SACI2|ARCHAEMETZINCIN islandicus (strain L.S.2.15 /

Query: 1 YIRGYNFI 8
YI GYNF+
Sbjct: 84 YIDGYNFV 91


>sp|AMZA_SACI1|ARCHAEMETZINCIN islandicus (strain Y.N.15.51 /

Query: 1 YIRGYNFI 8
YI GYNF+
Sbjct: 84 YIDGYNFV 91


>sp|MCRB_METBF|METHYL-COENZYME M reductase subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 4 GYNFIKA 10
GYNF KA
Sbjct: 288 GYNFYKA 294


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 2 IRGYNFIKA 10
IR +N+IKA
Sbjct: 479 IRDHNYIKA 487


>sp|KORB_METTH|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter thermautotrophicus

Query: 3 RGYNFIKA 10
RG++FI+A
Sbjct: 194 RGFSFIEA 201


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 IRGYNFI 8
+RGY+FI
Sbjct: 356 LRGYSFI 362


>sp|SPT5_THEKO|TRANSCRIPTION elongation factor Spt5|Thermococcus kodakarensis (strain ATCC

Query: 2 IRGYNFIKA 10
++GY FI+A
Sbjct: 43 VKGYIFIEA 51


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IRGYNFIK 9
I YNFIK
Sbjct: 323 IEKYNFIK 330


>sp|KORB_METTM|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter marburgensis (strain ATCC

Query: 3 RGYNFIKA 10
RG++FI+A
Sbjct: 194 RGFSFIEA 201


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IRGYNFIK 9
+RGYN I+
Sbjct: 57 LRGYNVIR 64


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 2 IRGYNFIK 9
++G NFIK
Sbjct: 290 VKGINFIK 297




191|SequenceR|960|951|PQGAGYIRGY

>sp|RTCA_PYRAB|RNA 3'-terminal phosphate cyclase|Pyrococcus abyssi (strain GE5 /

Query: 1 PQGAGYIRGY 10
P+G G I GY
Sbjct: 158 PKGGGIIEGY 167


>sp|SYK_SULAC|LYSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PQGAGYIRG 9
P+G YIRG
Sbjct: 352 PRGNMYIRG 360


>sp|Y1579_ARCFU|UNCHARACTERIZED protein AF_1579|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PQGAGYIR 8
P+GAG+ R
Sbjct: 145 PRGAGWFR 152


>sp|RTCA_PYRHO|RNA 3'-terminal phosphate cyclase|Pyrococcus horikoshii (strain ATCC

Query: 1 PQGAGYIRGY 10
P+G G + GY
Sbjct: 158 PKGGGIVEGY 167


>sp|GCH1L_ARCFU|GTP cyclohydrolase 1 type 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GAGYIRG 9
G GYIRG
Sbjct: 70 GIGYIRG 76


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PQGAGYIRG 9
P+G Y+RG
Sbjct: 345 PRGNQYVRG 353


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PQGAGYIR 8
P G GY+R
Sbjct: 382 PSGEGYLR 389


>sp|ENGB_ARCFU|PROBABLE GTP-binding protein EngB|Archaeoglobus fulgidus (strain ATCC

Query: 3 GAGYIRGY 10
G GY+ GY
Sbjct: 55 GFGYVSGY 62


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PQGAGYIR 8
P G GY+R
Sbjct: 382 PSGEGYLR 389


>sp|RTCA_PYRFU|RNA 3'-terminal phosphate cyclase|Pyrococcus furiosus (strain ATCC

Query: 1 PQGAGYIRGY 10
P+G G + GY
Sbjct: 158 PKGGGIVAGY 167


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 1 PQGAGY 6
PQG GY
Sbjct: 254 PQGIGY 259


>sp|FWDB_METMP|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 1 PQGAGYIRGY 10
P G + RGY
Sbjct: 310 PYGVDFSRGY 319


>sp|AMZA_PYRFU|ARCHAEMETZINCIN furiosus (strain ATCC 43587

Query: 3 GAGYIRG 9
G GY+RG
Sbjct: 184 GRGYVRG 190


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PQGAGYIRGY 10
P GYI GY
Sbjct: 106 PYVTGYIDGY 115


>sp|FTRL_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter

Query: 1 PQGAGYI 7
P+G GYI
Sbjct: 237 PEGVGYI 243


>sp|FTRL_METTM|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter marburgensis

Query: 1 PQGAGYI 7
P+G GYI
Sbjct: 237 PEGVGYI 243


>sp|PURP_THEKO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Thermococcus kodakarensis (strain ATCC

Query: 1 PQGAGYIRGY 10
P GAG RGY
Sbjct: 131 PFGAGGGRGY 140




192|SequenceR|965|956|LREAFPQGAG

>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 4 AFPQGAG 10
AFPQG G
Sbjct: 254 AFPQGVG 260


>sp|TTDA_METJA|PUTATIVE L(+)-tartrate dehydratase subunit alpha|Methanocaldococcus

Query: 4 AFPQGAG 10
AFP+GAG
Sbjct: 141 AFPKGAG 147


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 1 LREAFPQGAG 10
L AFPQG G
Sbjct: 249 LLTAFPQGIG 258


>sp|IF2A_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 LREAFPQ 7
LRE FPQ
Sbjct: 205 LREKFPQ 211


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LREAFPQG 8
+RE FP+G
Sbjct: 177 IREIFPEG 184


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 LREAFPQGAG 10
LRE +P+ AG
Sbjct: 218 LRENYPELAG 227


>sp|Y3510_METJA|UNCHARACTERIZED protein MJECL10|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LREAFPQ 7
LREA+P+
Sbjct: 196 LREAYPE 202


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 1 LREAFPQGAG 10
L AFP+G G
Sbjct: 251 LLAAFPEGVG 260


>sp|ARCH_METJA|PROTEIN archease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LREAFPQGA 9
L EAF +GA
Sbjct: 20 LEEAFKEGA 28


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 3 EAFPQG 8
E+FPQG
Sbjct: 206 ESFPQG 211


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LREAFPQGAG 10
+RE FP +G
Sbjct: 335 IREVFPVASG 344




193|SequenceR|970|961|NFQMLLREAF

***** No hits found ******


194|SequenceR|975|966|QTLRHNFQML

>sp|Y136_METHJ|UPF0280 protein Mhun_0136|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 TLRHNFQM 9
TLRH+F++
Sbjct: 2 TLRHHFEL 9


>sp|YC9A_METJA|UNCHARACTERIZED protein MJ1292.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TLRHNFQM 9
TL HN+Q+
Sbjct: 153 TLSHNYQV 160


>sp|Y1664_METJA|UNCHARACTERIZED protein MJ1664|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LRHNFQM 9
L HNFQ+
Sbjct: 50 LEHNFQL 56




195|SequenceR|980|971|EAAEQQTLRH

>sp|DNAG_METS5|DNA primase DnaG|Metallosphaera sedula (strain ATCC 51363

Query: 1 EAAEQQTLR 9
E AEQQT++
Sbjct: 294 EVAEQQTVQ 302




196|SequenceR|985|976|MQQAKEAAEQ

>sp|RS17E_PYRCJ|SMALL ribosomal subunit protein eS17|Pyrobaculum calidifontis (strain

Query: 2 QQAKEAAEQ 10
Q+AKE AEQ
Sbjct: 61 QKAKEKAEQ 69




197|SequenceR|990|981|KTAAYMQQAK

>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 KTAAYMQQAK 10
K Y+QQAK
Sbjct: 243 KYGEYLQQAK 252




198|SequenceR|995|986|YWRLGKTAAY

>sp|COBD_METMP|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 YWRLGKTAAY 10
Y GKTAAY
Sbjct: 194 YLYYGKTAAY 203


>sp|COBD_METM5|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 YWRLGKTAAY 10
Y GKTAAY
Sbjct: 194 YLYYGKTAAY 203


>sp|COBD_METM7|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 YWRLGKTAAY 10
Y GKTAAY
Sbjct: 194 YQYYGKTAAY 203


>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 1 YWRLGK 6
YW+LG+
Sbjct: 203 YWKLGR 208


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 2 WRLGKTAA 9
W+ G+TAA
Sbjct: 488 WKSGRTAA 495


>sp|COBD_METVS|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus vannielii (strain

Query: 1 YWRLGKTAAY 10
Y GKTAAY
Sbjct: 194 YRYYGKTAAY 203


>sp|MFNA_HALSA|PROBABLE L-aspartate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 2 WRLGKTAA 9
WR+ +TA+
Sbjct: 321 WRISRTAS 328


>sp|MFNA_HALS3|PROBABLE L-aspartate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 2 WRLGKTAA 9
WR+ +TA+
Sbjct: 321 WRISRTAS 328


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 WRLGKTAAY 10
W L K AAY
Sbjct: 308 WVLSKKAAY 316


>sp|DN7E_SULAC|DNA-BINDING protein 7e|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WRLGKTAAY 10
WR+GK ++
Sbjct: 24 WRVGKMVSF 32


>sp|DN7D_SULAC|DNA-BINDING protein 7d|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WRLGKTAAY 10
WR+GK ++
Sbjct: 24 WRVGKMVSF 32


>sp|DN7_SULTO|DNA-BINDING protein 7|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WRLGKTAAY 10
WR+GK ++
Sbjct: 24 WRVGKMISF 32




199|SequenceR|1000|991|EDSLRYWRLG

>sp|3MGH_METAR|PUTATIVE 3-methyladenine DNA glycosylase|Methanocella arvoryzae (strain DSM

Query: 1 EDSLRYWRL 9
ED+LR WR
Sbjct: 176 EDALRPWRF 184


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EDSLRYW 7
EDSL YW
Sbjct: 602 EDSLEYW 608


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 1 EDSLRYWRLG 10
ED LR WR G
Sbjct: 502 EDKLRLWRSG 511


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDSLRYWR 8
ED +YW+
Sbjct: 154 EDDFKYWQ 161


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DSLRYW 7
D+LRYW
Sbjct: 538 DTLRYW 543


>sp|PTH_METTH|PEPTIDYL-TRNA hydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EDSLRYWRL 9
ED +R W L
Sbjct: 35 EDKIRKWEL 43


>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 5 RYWRLG 10
RYW+LG
Sbjct: 202 RYWKLG 207


>sp|Y007_METJA|PUTATIVE dehydratase subunit MJ0007|Methanocaldococcus jannaschii (strain

Query: 1 EDSLRYW 7
EDSL+ W
Sbjct: 131 EDSLKIW 137


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 EDSLRYWRLG 10
E+ L+ WR+G
Sbjct: 744 EEELKEWRIG 753


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 DSLRYW 7
D+LRYW
Sbjct: 573 DALRYW 578


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SLRYW 7
SLRYW
Sbjct: 11 SLRYW 15


>sp|Y120_METJA|UNCHARACTERIZED protein MJ0120|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDSLRYWRLG 10
+D +RY +LG
Sbjct: 43 DDDVRYKKLG 52


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 DSLRYW 7
D+LR+W
Sbjct: 531 DALRFW 536


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DSLRYW 7
D+LR+W
Sbjct: 542 DALRFW 547


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EDSLRYWRLG 10
EDS Y R+G
Sbjct: 518 EDSTTYTRVG 527


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DSLRYW 7
D+LR+W
Sbjct: 542 DALRFW 547




200|SequenceR|1005|996|VLWEGEDSLR

>sp|NDK_HALMA|NUCLEOSIDE diphosphate kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VLWEGEDSLR 10
++WEG+D+ R
Sbjct: 76 MVWEGQDATR 85


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VLWEGEDSLR 10
V WEG D R
Sbjct: 335 VYWEGSDDKR 344


>sp|PYRH_IGNH4|URIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LWEGEDSL 9
LW+GED L
Sbjct: 97 LWDGEDIL 104


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLWEGEDSL 9
V+W GED L
Sbjct: 342 VVWVGEDYL 350


>sp|NDK_METHJ|NUCLEOSIDE diphosphate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VLWEGEDSLR 10
++WEG+D ++
Sbjct: 73 MVWEGKDIVK 82


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VLWEGEDSL 9
V+W GED L
Sbjct: 338 VVWVGEDYL 346


>sp|NDK_HALWD|NUCLEOSIDE diphosphate kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VLWEGEDSLR 10
++WEG D+ R
Sbjct: 80 MVWEGADATR 89


>sp|NDK_HALSA|NUCLEOSIDE diphosphate kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VLWEGEDSLR 10
++WEG D+ R
Sbjct: 77 MVWEGADATR 86


>sp|NDK_HALS3|NUCLEOSIDE diphosphate kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VLWEGEDSLR 10
++WEG D+ R
Sbjct: 77 MVWEGADATR 86


>sp|NDK_HALLT|NUCLEOSIDE diphosphate kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VLWEGEDSLR 10
++WEG D+ R
Sbjct: 77 MVWEGADATR 86


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VLWEGEDSL 9
V+W GED L
Sbjct: 342 VVWVGEDYL 350


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 VLWEGEDS 8
+ WEG++S
Sbjct: 722 LFWEGDES 729


>sp|NDK_NATPD|NUCLEOSIDE diphosphate kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VLWEGEDSL 9
++WEG+D++
Sbjct: 76 MVWEGQDAV 84


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 LWEGEDSLR 10
+WE E+S++
Sbjct: 300 IWETEESMK 308


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 2 LWEGEDSLR 10
+WE E+S++
Sbjct: 300 IWETEESMK 308




201|SequenceR|1010|1001|LNLERVLWEG

>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 3 LERVLWEG 10
+E+V+WEG
Sbjct: 97 VEKVIWEG 104


>sp|DNAG_METB6|DNA primase DnaG|Methanoregula boonei (strain DSM 21154

Query: 3 LERVLWEG 10
L+R++W+G
Sbjct: 382 LDRLVWKG 389


>sp|Y1577_ARCFU|UNCHARACTERIZED protein AF_1577|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LNLERVLWE 9
L L R+LWE
Sbjct: 44 LLLARILWE 52


>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LNLERVLWEG 10
N+ RV++EG
Sbjct: 331 FNVRRVIFEG 340


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNLERVLWE 9
+N+E+ WE
Sbjct: 77 INMEKGFWE 85


>sp|Y1654_ARCFU|UNCHARACTERIZED protein AF_1654|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LERVLWE 9
+ERV WE
Sbjct: 262 IERVSWE 268


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 NLERVLWEG 10
N RV+W+G
Sbjct: 265 NRIRVIWKG 273


>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LNLERVLWEG 10
LN+ V+W+
Sbjct: 43 LNVHEVMWDA 52


>sp|TBP_THECE|TATA-BOX-BINDING protein|Thermococcus celer

Query: 1 LNLERVL 7
LNLERV+
Sbjct: 21 LNLERVI 27


>sp|THPR_PYRFU|RNA 2',3'-cyclic phosphodiesterase|Pyrococcus furiosus (strain ATCC

Query: 2 NLERVLWEG 10
N RV+W G
Sbjct: 85 NYVRVIWAG 93




202|SequenceR|1015|1006|TRDVPLNLER

>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DVPLNLER 10
+VPLNLER
Sbjct: 244 EVPLNLER 251


>sp|Y1084_METPE|UPF0212 protein Mpal_1084|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 RDVPLNLE 9
RDVPLN++
Sbjct: 100 RDVPLNVQ 107


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 DVPLNLER 10
+VPLNLE+
Sbjct: 244 EVPLNLEK 251


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DVPLNLER 10
+VPLNLE+
Sbjct: 247 EVPLNLEK 254


>sp|RPIA_THEAC|RIBOSE-5-PHOSPHATE isomerase A|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DVPLNLER 10
D P+NLER
Sbjct: 186 DDPINLER 193


>sp|APGM_THEVO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RDVPLNLER 10
RD P+N+ER
Sbjct: 202 RDHPVNVER 210


>sp|RL15_THEVO|LARGE ribosomal subunit protein uL15|Thermoplasma volcanium (strain

Query: 1 TRDVPLNL 8
T DVP+NL
Sbjct: 63 TPDVPINL 70


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 2 RDVPLNLER 10
+D P+NLER
Sbjct: 205 KDHPVNLER 213


>sp|MTTC_METBA|TRIMETHYLAMINE corrinoid protein|Methanosarcina barkeri

Query: 2 RDVPLN 7
RDVP+N
Sbjct: 130 RDVPIN 135


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 TRDVPLNL 8
TR+VPL+L
Sbjct: 330 TREVPLSL 337


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 1 TRDVPLNL 8
TR+VPL+L
Sbjct: 330 TREVPLSL 337


>sp|KHSE_SULTO|HOMOSERINE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 VPLNLE 9
VPLNLE
Sbjct: 158 VPLNLE 163


>sp|CSM5_METJA|CRISPR system Cms protein Csm5|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DVPLNLE 9
DVP+N+E
Sbjct: 245 DVPINME 251


>sp|RS2_METBU|SMALL ribosomal subunit protein uS2|Methanococcoides burtonii (strain DSM

Query: 2 RDVPLNLE 9
RD+P N E
Sbjct: 199 RDIPFNYE 206


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 3 DVPLNLER 10
D+P+NL R
Sbjct: 966 DIPMNLVR 973


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 TRDVPLNLER 10
T +VPL LER
Sbjct: 243 TYEVPLLLER 252


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TRDVPLNLER 10
T +VPL LER
Sbjct: 243 TYEVPLLLER 252


>sp|APGM_METST|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaera stadtmanae (strain ATCC

Query: 2 RDVPLNLER 10
+D P+N+ER
Sbjct: 203 KDHPVNIER 211


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TRDVPLNLER 10
T +VPL LER
Sbjct: 243 TYEVPLLLER 252


>sp|AATF_THEON|A-TYPE ATP synthase subunit F|Thermococcus onnurineus (strain NA1)

Query: 3 DVPLNLER 10
D PL++ER
Sbjct: 28 DTPLDMER 35


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TRDVPLNLE 9
T+ +P+NL+
Sbjct: 559 TKSIPINLQ 567




203|SequenceR|1020|1011|IWGGETRDVP

>sp|YPV8_METTF|UNCHARACTERIZED protein ORF8|Methanothermobacter thermautotrophicus

Query: 2 WGGETRDVP 10
WGG DVP
Sbjct: 298 WGGAVEDVP 306


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 2 WGGETRDVP 10
WGG DVP
Sbjct: 298 WGGAVEDVP 306


>sp|PUR7_METJA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IWGGETRDV 9
+W ETRDV
Sbjct: 207 LWDKETRDV 215


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 1 IWGGE 5
IWGGE
Sbjct: 529 IWGGE 533


>sp|CHEB_ARCFU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Archaeoglobus fulgidus

Query: 2 WGGETRDV 9
W G+T+DV
Sbjct: 150 WKGKTKDV 157


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GGETRDVP 10
GG+ R+VP
Sbjct: 182 GGQVREVP 189


>sp|Y441_HALMA|UPF0212 protein rrnAC0441|Haloarcula marismortui (strain ATCC 43049

Query: 3 GGETRDVP 10
GG RDVP
Sbjct: 96 GGALRDVP 103


>sp|Y869_HALLT|UPF0212 protein Hlac_0869|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 GGETRDVP 10
GG RDVP
Sbjct: 97 GGALRDVP 104


>sp|Y879_HALSA|UPF0212 protein VNG_0879C|Halobacterium salinarum (strain ATCC 700922

Query: 3 GGETRDVP 10
GG RDVP
Sbjct: 97 GGALRDVP 104


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 3 GGETRDV 9
GG+TRD+
Sbjct: 54 GGQTRDI 60


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 3 GGETRDV 9
GG TRD+
Sbjct: 619 GGNTRDI 625


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WGGETRDVP 10
W +TRD+P
Sbjct: 49 WHRDTRDLP 57


>sp|KAE1_STAMF|TRNA N6-adenosine threonylcarbamoyltransferase|Staphylothermus marinus

Query: 4 GETRDVP 10
GET D+P
Sbjct: 151 GETLDIP 157


>sp|Y2663_HALWD|UPF0212 protein HQ_2663A|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GGETRDVP 10
GG RDVP
Sbjct: 97 GGALRDVP 104


>sp|Y350_METKA|UPF0248 protein MK0350|Methanopyrus kandleri (strain AV19 /

Query: 1 IWGGETRDV 9
IWG E +DV
Sbjct: 28 IWGDEIQDV 36


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 IWGGETRDV 9
+ GGE +DV
Sbjct: 355 VLGGEVKDV 363


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IWGGETRDV 9
+ GGE +DV
Sbjct: 355 VLGGEVKDV 363


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IWGGETRDV 9
+ GGE +DV
Sbjct: 355 VLGGEVKDV 363


>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 1 IWGGETRDV 9
+WGGE D+
Sbjct: 294 LWGGEAGDL 302


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 1 IWGGETRDV 9
+ GGE +DV
Sbjct: 355 VLGGEVKDV 363


>sp|MTRH_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus vannielii (strain ATCC

Query: 3 GGETRDV 9
GG+T+DV
Sbjct: 172 GGKTKDV 178


>sp|KAE1_THEPD|TRNA N6-adenosine threonylcarbamoyltransferase|Thermofilum pendens

Query: 4 GETRDVP 10
GET D+P
Sbjct: 156 GETLDIP 162




204|SequenceR|1025|1016|LDQLSIWGGE

>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DQLSIWGGE 10
D L IWGG+
Sbjct: 345 DGLEIWGGQ 353


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DQLSIWGGE 10
DQL+I GGE
Sbjct: 363 DQLTIHGGE 371


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 5 SIWGGE 10
+IWGGE
Sbjct: 528 NIWGGE 533


>sp|DGGGP_METJA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LSIWGGE 10
LSIWG E
Sbjct: 170 LSIWGRE 176


>sp|PRIL_METTH|DNA primase large subunit PriL|Methanothermobacter thermautotrophicus

Query: 2 DQLSIWGGE 10
D+L+++GGE
Sbjct: 127 DRLNVFGGE 135


>sp|TRM56_METS5|TRNA (cytidine(56)-2'-O)-methyltransferase|Metallosphaera sedula

Query: 2 DQLSIWGGE 10
D +++WGG+
Sbjct: 45 DVINVWGGK 53


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 QLSIWGGE 10
+L++W GE
Sbjct: 309 ELAVWSGE 316


>sp|IF6_SULAC|TRANSLATION initiation factor 6|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LDQLSIWG 8
LD+LSI+G
Sbjct: 3 LDKLSIFG 10


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 DQLSIWGGE 10
D+L+I GGE
Sbjct: 360 DKLTIKGGE 368


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DQLSIWG 8
DQL+ WG
Sbjct: 106 DQLAEWG 112


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LDQLSIWG 8
L +LS+WG
Sbjct: 370 LVELSVWG 377


>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 6 IWGGE 10
+WGGE
Sbjct: 294 LWGGE 298




205|SequenceR|1030|1021|RQVKRLDQLS

>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 3 VKRLDQL 9
VKRLDQ+
Sbjct: 472 VKRLDQV 478




206|SequenceR|1035|1026|KRATERQVKR

***** No hits found ******


207|SequenceR|1040|1031|KKWQSKRATE

>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KWQSKRATE 10
KW SK+A +
Sbjct: 190 KWVSKKANQ 198


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 3 WQSKRAT 9
WQ+KRA
Sbjct: 250 WQAKRAV 256


>sp|FTR_METJA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KKWQSKRATE 10
KKW ATE
Sbjct: 30 KKWAKIAATE 39


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM

Query: 3 WQSKRA 8
W+SKRA
Sbjct: 92 WESKRA 97




208|SequenceR|1045|1036|AVVEWKKWQS

>sp|GGGPS_METAR|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 AVVEWKKWQ 9
A ++WKKW+
Sbjct: 2 APIDWKKWR 10


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 AVVEWKKW 8
A VEW KW
Sbjct: 108 AYVEWYKW 115


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 AVVEWKKW 8
A VEW KW
Sbjct: 108 AYVEWYKW 115


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 AVVEWKKW 8
A VEW KW
Sbjct: 107 AYVEWYKW 114


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 AVVEWKKW 8
A VEW KW
Sbjct: 108 AYVEWYKW 115


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EWKKWQS 10
+WKKW++
Sbjct: 128 DWKKWEN 134


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VVEWKKWQ 9
V+ W+KWQ
Sbjct: 99 VLRWRKWQ 106


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VVEWKKWQ 9
V+ W+KWQ
Sbjct: 98 VLRWRKWQ 105


>sp|YB5A_METJA|UNCHARACTERIZED protein MJ1155.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AVVEWKKWQS 10
A+V +KKW +
Sbjct: 79 AIVSYKKWNN 88


>sp|PELO_METJA|PROTEIN pelota homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WKKWQ 9
WKKWQ
Sbjct: 114 WKKWQ 118


>sp|ACDA1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 1 AVVEWKKWQS 10
A+ +W KW++
Sbjct: 448 ALYKWSKWKA 457


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 4 EWKKWQS 10
+WK+W+S
Sbjct: 405 KWKEWES 411


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 3 VEWKKWQ 9
+ W+KWQ
Sbjct: 101 LRWRKWQ 107


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 3 VEWKKWQ 9
+ W+KWQ
Sbjct: 98 LRWRKWQ 104


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 4 EWKKWQS 10
EW +W+S
Sbjct: 361 EWYEWRS 367


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 EWKKWQS 10
+WK+W+S
Sbjct: 405 KWKEWES 411


>sp|Y227_METJA|UNCHARACTERIZED protein MJ0227|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AVVEWKKW 8
AV+E KKW
Sbjct: 83 AVIESKKW 90


>sp|TF2B_CALMQ|TRANSCRIPTION initiation factor IIB|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VVEWKKWQ 9
++++KKWQ
Sbjct: 127 ILKYKKWQ 134


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VVEWKKWQS 10
VVE KKW++
Sbjct: 1595 VVEAKKWKA 1603


>sp|AMZA_SULAC|ARCHAEMETZINCIN acidocaldarius (strain ATCC 33909

Query: 5 WKKWQ 9
W++WQ
Sbjct: 47 WERWQ 51


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 5 WKKW 8
WKKW
Sbjct: 114 WKKW 117


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 WKKW 8
WKKW
Sbjct: 114 WKKW 117


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AVVEWKKWQS 10
A VEW W +
Sbjct: 207 ATVEWDPWAA 216


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 AVVEWKKWQS 10
A VEW W +
Sbjct: 207 ATVEWDPWAA 216


>sp|MTRD_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina acetivorans (strain

Query: 4 EWKKW 8
+WKKW
Sbjct: 217 KWKKW 221


>sp|Y672_PYRHO|UPF0252 protein PH0672|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AVVEWKKW 8
+EWK W
Sbjct: 60 GTIEWKIW 67


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 5 WKKWQ 9
W+KWQ
Sbjct: 157 WRKWQ 161


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 5 WKKW 8
WKKW
Sbjct: 114 WKKW 117


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 5 WKKW 8
WKKW
Sbjct: 114 WKKW 117


>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 4 EWKKWQ 9
+WK W+
Sbjct: 126 DWKSWE 131


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 5 WKKW 8
WKKW
Sbjct: 114 WKKW 117


>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 5 WKKW 8
WKKW
Sbjct: 114 WKKW 117


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 5 WKKWQS 10
W+KW S
Sbjct: 234 WRKWAS 239


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 5 WKKWQS 10
W+KW S
Sbjct: 192 WRKWAS 197


>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 2 VVEWKKW 8
+ EW +W
Sbjct: 48 IYEWNEW 54




209|SequenceR|1050|1041|KWAREAVVEW

>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 3 AREAVVEW 10
AREA++EW
Sbjct: 36 AREALLEW 43


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 AREAVVEW 10
AR+A+VEW
Sbjct: 37 ARQALVEW 44


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 WAREAVVE 9
WAR AVV+
Sbjct: 574 WARPAVVD 581


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WAREAVVEW 10
WA EA+ +W
Sbjct: 360 WAVEAISDW 368


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KWAREAVVEW 10
+W+RE ++W
Sbjct: 265 QWSRETGIKW 274


>sp|XPB2_SULTO|DNA 3'-5' translocase XPB2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KWAREAVVEW 10
K AREA++ W
Sbjct: 289 KEAREALLAW 298


>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 1 KWAREAVVEW 10
KW +EA+V +
Sbjct: 49 KWTQEAIVNY 58


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 KWAREAVVEW 10
K +EA +EW
Sbjct: 246 KEMKEAAIEW 255


>sp|Y068_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 1 KWAREAV 7
KWA EAV
Sbjct: 116 KWALEAV 122


>sp|SPSS1_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AREAVVEW 10
AR+A++EW
Sbjct: 25 ARQALLEW 32


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KWAREAVVEW 10
KW E EW
Sbjct: 192 KWVAEKSREW 201




210|SequenceR|1055|1046|SETGGKWARE

>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 3 TGGKWARE 10
TGG+W R+
Sbjct: 291 TGGRWIRD 298


>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 2 ETGGKWARE 10
E G +WARE
Sbjct: 463 EAGAEWARE 471


>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SETGGKWARE 10
SE KWARE
Sbjct: 250 SEDAMKWARE 259


>sp|Y1181_METJA|UNCHARACTERIZED protein MJ1181|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SETGGKWA 8
S TGG WA
Sbjct: 74 SATGGTWA 81


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 SETGGKWARE 10
SET KW+RE
Sbjct: 143 SETIFKWSRE 152


>sp|TOP6A_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ETGGKWAR 9
ETGG +AR
Sbjct: 206 ETGGMYAR 213


>sp|TOP6A_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 2 ETGGKWAR 9
ETGG +AR
Sbjct: 202 ETGGMYAR 209


>sp|CMR4_PYRFU|CRISPR system Cmr endoribonuclease Cmr4|Pyrococcus furiosus (strain ATCC

Query: 2 ETGGKWARE 10
ETGG W E
Sbjct: 220 ETGGLWYEE 228


>sp|TOP6A_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ETGGKWAR 9
ETGG +AR
Sbjct: 202 ETGGMYAR 209


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 SETGGKWARE 10
ETG +W RE
Sbjct: 532 DETGRRWRRE 541


>sp|CMR4_SACS2|CRISPR system CMR subunit Cmr4|Saccharolobus solfataricus (strain ATCC

Query: 2 ETGGKWARE 10
E GG W+ E
Sbjct: 246 EEGGLWSEE 254


>sp|NEP1_PYRAR|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum arsenaticum (strain

Query: 1 SETGGKW 7
+E GG+W
Sbjct: 141 TELGGRW 147


>sp|Y1285_METTH|UNCHARACTERIZED HTH-type transcriptional regulator MTH_1285|Methanothermobacter

Query: 1 SETGGKW 7
+E GGKW
Sbjct: 33 NEIGGKW 39


>sp|RL2_NATPD|LARGE ribosomal subunit protein uL2|Natronomonas pharaonis (strain ATCC

Query: 4 GGKWAR 9
GGKW R
Sbjct: 184 GGKWPR 189




211|SequenceR|1060|1051|KNFMESETGG

>sp|HPRT_METVS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 KNFMESETG 9
KN +E ETG
Sbjct: 157 KNIVEKETG 165


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 KNFMESETGG 10
+NF+E TGG
Sbjct: 486 RNFIEQLTGG 495


>sp|TRPG_METJA|ANTHRANILATE synthase component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KNFMESE 7
KNF+ESE
Sbjct: 190 KNFVESE 196


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 NFMESETGG 10
NF + ETGG
Sbjct: 72 NFCDVETGG 80


>sp|AATC_METST|A-TYPE ATP synthase subunit C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KNFMESE 7
K FMESE
Sbjct: 283 KEFMESE 289


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 1 KNFMESETGG 10
+NF ++E GG
Sbjct: 97 RNFAKAEEGG 106


>sp|IDI2_HALSA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 3 FMESETGG 10
F+ES TGG
Sbjct: 66 FIESMTGG 73




212|SequenceR|1065|1056|AISELKNFME

>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 AISELKNFME 10
AIS++KN ME
Sbjct: 56 AISQIKNSME 65


>sp|Y3533_METJA|UNCHARACTERIZED protein MJECL33|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ISELKNFME 10
I +LKNF+E
Sbjct: 315 IEDLKNFVE 323


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 ELKNFME 10
ELKNF+E
Sbjct: 1011 ELKNFLE 1017


>sp|NUCS_METJA|ENDONUCLEASE NucS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AISELKNFME 10
A+S+LK ++E
Sbjct: 190 AVSQLKRYVE 199


>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 AISELKNFME 10
A+ E+K+F+E
Sbjct: 455 AVEEMKSFIE 464




213|SequenceR|1070|1061|PIDSTAISEL

>sp|METK_HALWD|S-ADENOSYLMETHIONINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PIDSTAIS 8
P+DSTA+S
Sbjct: 104 PVDSTAVS 111




214|SequenceR|1075|1066|LVPTRPIDST

>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 1 LVPTRPIDST 10
L+P RP+D T
Sbjct: 184 LIPFRPVDKT 193


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PTRPIDS 9
PTRPID+
Sbjct: 1411 PTRPIDT 1417


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PTRPIDS 9
PTRPID+
Sbjct: 1000 PTRPIDT 1006


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PTRPIDS 9
PTRPID+
Sbjct: 1497 PTRPIDT 1503


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 3 PTRPIDS 9
PTRPID+
Sbjct: 1000 PTRPIDT 1006


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 2 VPTRPID 8
VPTRP+D
Sbjct: 224 VPTRPVD 230


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PTRPID 8
PTRPID
Sbjct: 1014 PTRPID 1019


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 1 LVPTRPID 8
L+P RP+D
Sbjct: 185 LIPFRPVD 192


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 LVPTRPID 8
L+P RP+D
Sbjct: 184 LIPFRPVD 191


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 1 LVPTRPIDST 10
L+P RP++ T
Sbjct: 184 LIPFRPVNET 193


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LVPTRPID 8
L PT PID
Sbjct: 577 LTPTNPID 584


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LVPTRPID 8
L+PT PID
Sbjct: 241 LLPTSPID 248


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 1 LVPTRPID 8
L+PT PID
Sbjct: 238 LLPTSPID 245


>sp|TF2B_METTP|TRANSCRIPTION initiation factor IIB|Methanothrix thermoacetophila (strain DSM

Query: 1 LVPTRPID 8
L+PT PID
Sbjct: 241 LMPTSPID 248


>sp|TF2B_METAC|TRANSCRIPTION initiation factor IIB|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LVPTRPID 8
L+PT PID
Sbjct: 241 LMPTSPID 248


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PTRPID 8
PTRP+D
Sbjct: 995 PTRPLD 1000


>sp|TF2B_METMZ|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 LVPTRPID 8
L+PT PID
Sbjct: 241 LMPTSPID 248


>sp|TF2B_METMA|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LVPTRPID 8
L+PT PID
Sbjct: 241 LMPTSPID 248


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PTRPIDST 10
PT+P+D T
Sbjct: 1012 PTKPLDET 1019


>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 1 LVPTRPID 8
L+PT PID
Sbjct: 238 LLPTSPID 245


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 PTRPIDS 9
PT+PID+
Sbjct: 397 PTKPIDT 403


>sp|METXA_HALSA|HOMOSERINE O-acetyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PTRPIDST 10
P RPID+T
Sbjct: 66 PGRPIDTT 73


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 LVPTRPIDST 10
L+P RP+ T
Sbjct: 184 LIPFRPVKKT 193


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LVPTRPID 8
L PT PID
Sbjct: 238 LAPTSPID 245


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 1 LVPTRPID 8
L PT PID
Sbjct: 243 LTPTNPID 250


>sp|GVPC1_HALSA|GAS vesicle protein C1|Halobacterium salinarum (strain ATCC 700922

Query: 2 VPTRPIDST 10
VP RP D T
Sbjct: 374 VPLRPDDKT 382


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PTRPIDST 10
P RP+D T
Sbjct: 513 PVRPVDGT 520


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PTRPID 8
PT+PID
Sbjct: 1013 PTKPID 1018


>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 1 LVPTRPID 8
L PT P+D
Sbjct: 243 LAPTNPVD 250


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 1 LVPTRPID 8
L PT P+D
Sbjct: 243 LAPTNPVD 250


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 1 LVPTRPID 8
L PT P+D
Sbjct: 243 LAPTNPVD 250


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 1 LVPTRPID 8
L PT P+D
Sbjct: 243 LAPTNPVD 250


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 PTRPIDS 9
P RPID+
Sbjct: 988 PVRPIDA 994




215|SequenceR|1080|1071|SICCGLVPTR

>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SICCGLV 7
+ICCG+V
Sbjct: 210 TICCGMV 216


>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ICCGLVPTR 10
+ CG+VP R
Sbjct: 7 LICGVVPVR 15


>sp|KAE1B_NATPD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 ICCGLVPT 9
+CCGL T
Sbjct: 225 VCCGLQET 232


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 2 ICCGLVP 8
+C GLVP
Sbjct: 169 MCAGLVP 175


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ICCGLVP 8
I CG++P
Sbjct: 242 IACGMIP 248


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 ICCGLVP 8
IC G++P
Sbjct: 134 ICAGIIP 140


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 ICCGLVP 8
IC G++P
Sbjct: 134 ICAGIIP 140


>sp|AROK_ARCFU|SHIKIMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ICCGL 6
ICCG+
Sbjct: 222 ICCGI 226


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain ATCC

Query: 1 SICCGLVPT 9
+IC G +PT
Sbjct: 191 TICRGKIPT 199


>sp|Y3936_METAC|UPF0060 membrane protein MA_3936|Methanosarcina acetivorans (strain ATCC

Query: 4 CGLVPT 9
CG++PT
Sbjct: 48 CGIIPT 53




216|SequenceR|1085|1076|PELARSICCG

>sp|CAS1A_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ELARSICCG 10
E+ARSIC G
Sbjct: 106 EIARSICTG 114


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PELARSICCG 10
P+LAR CG
Sbjct: 21 PKLARGYVCG 30


>sp|DHQS_METHJ|3-DEHYDROQUINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PELARSIC 8
P+L RSIC
Sbjct: 132 PDLVRSIC 139


>sp|MTAP_AERPE|S-METHYL-5'-THIOADENOSINE phosphorylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PELARSICC 9
PEL R CC
Sbjct: 259 PELERCSCC 267


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PELARSICCG 10
P LAR CG
Sbjct: 19 PRLARGYVCG 28


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PELARSICCG 10
P LAR CG
Sbjct: 19 PRLARGYVCG 28


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PELARSICCG 10
P LAR CG
Sbjct: 19 PRLARGYVCG 28


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 PELARSI 7
PELARS+
Sbjct: 476 PELARSL 482


>sp|HPRT_METTP|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothrix thermoacetophila (strain

Query: 1 PELARSICC 9
PEL R + C
Sbjct: 36 PELIREVVC 44


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PELARSICCG 10
P LAR CG
Sbjct: 19 PGLARGYVCG 28


>sp|RL30_METTP|LARGE ribosomal subunit protein uL30|Methanothrix thermoacetophila

Query: 2 ELARSICCG 10
ELA ++C G
Sbjct: 94 ELAEAVCAG 102


>sp|CHEB2_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina

Query: 1 PELARSIC 8
PE+A IC
Sbjct: 116 PEMAEEIC 123




217|SequenceR|1090|1081|EQVASPELAR

>sp|IF6_METTH|TRANSLATION initiation factor 6|Methanothermobacter thermautotrophicus (strain

Query: 1 EQVASPELAR 10
E+ PELAR
Sbjct: 203 EETTGPELAR 212


>sp|IF6_METKA|TRANSLATION initiation factor 6|Methanopyrus kandleri (strain AV19 /

Query: 1 EQVASPELAR 10
E PELAR
Sbjct: 204 EDTTGPELAR 213




218|SequenceR|1095|1086|STMFEEQVAS

>sp|RPO3_NATPD|DNA-DIRECTED RNA polymerase subunit Rpo3|Natronomonas pharaonis (strain ATCC

Query: 1 STMFEEQVA 9
S MF+EQ+A
Sbjct: 55 SVMFDEQLA 63




219|SequenceR|1100|1091|VWNVRSTMFE

>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VWNVRSTMFE 10
+WN TM+E
Sbjct: 280 IWNESITMYE 289




220|SequenceR|1105|1096|ASSQVVWNVR

>sp|Y087_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 5 VVWNVR 10
V+WN+R
Sbjct: 60 VIWNIR 65


>sp|GGR1_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 ASSQVVWNVR 10
A+ +++WN+R
Sbjct: 380 ANKKLLWNLR 389


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 ASSQVVWNVR 10
A V+WN+R
Sbjct: 321 AEVPVLWNIR 330




221|SequenceR|1110|1101|HLYDVASSQV

>sp|HEM1_SULAC|GLUTAMYL-TRNA reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HLYDVAS 7
HLY VAS
Sbjct: 97 HLYQVAS 103




222|SequenceR|1115|1106|AVLMLHLYDV

>sp|DNLI_METTP|DNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LMLHLYDV 10
L LHL+D+
Sbjct: 331 LKLHLFDI 338




223|SequenceR|1120|1111|FLWKMAVLML

>sp|Y142_AERPE|UNCHARACTERIZED HTH-type transcriptional regulator APE_0142|Aeropyrum pernix

Query: 1 FLWKMAVL 8
+LWK A+L
Sbjct: 90 YLWKSAIL 97




224|SequenceR|1125|1116|IAFEEFLWKM

>sp|GSA_ARCFU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FEEFLWKM 10
F EF W+M
Sbjct: 374 FMEFFWRM 381


>sp|TRUA_METM6|TRNA pseudouridine synthase A|Methanococcus maripaludis (strain C6 /

Query: 4 EEFLWKM 10
E FLW M
Sbjct: 167 ESFLWNM 173


>sp|TRUA_METTH|TRNA pseudouridine synthase A|Methanothermobacter thermautotrophicus

Query: 4 EEFLWKM 10
E FLW+M
Sbjct: 171 ESFLWQM 177


>sp|TRUA_METMP|TRNA pseudouridine synthase A|Methanococcus maripaludis (strain DSM

Query: 4 EEFLWKM 10
E FLW M
Sbjct: 167 ESFLWNM 173


>sp|Y582_METMA|UNCHARACTERIZED glycosyltransferase MM_0582|Methanosarcina mazei (strain ATCC

Query: 4 EEFLWK 9
EEF WK
Sbjct: 129 EEFFWK 134


>sp|TRUA_METS3|TRNA pseudouridine synthase A|Methanobrevibacter smithii (strain ATCC

Query: 4 EEFLWKM 10
E FLW M
Sbjct: 186 ESFLWNM 192


>sp|TRUA_METST|TRNA pseudouridine synthase A|Methanosphaera stadtmanae (strain ATCC

Query: 1 IAFEEFLWKM 10
I E FLW M
Sbjct: 172 IVGESFLWNM 181


>sp|TRUA_METMJ|TRNA pseudouridine synthase A|Methanoculleus marisnigri (strain ATCC

Query: 4 EEFLWKM 10
E FLW M
Sbjct: 170 ESFLWNM 176


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IAFEEFLWK 9
I F+EF W+
Sbjct: 239 IEFDEFDWE 247


>sp|TRUA_METJA|TRNA pseudouridine synthase A|Methanocaldococcus jannaschii (strain ATCC

Query: 4 EEFLWKM 10
E FLW M
Sbjct: 165 ESFLWNM 171


>sp|METE_PYRHO|METHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IAFEEFLW 8
+ EEFLW
Sbjct: 110 LVLEEFLW 117


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 IAFEEFLW 8
+ EEFLW
Sbjct: 110 LVLEEFLW 117


>sp|SERC_METBF|PHOSPHOSERINE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AFEEFLWKM 10
AFE LW M
Sbjct: 75 AFEMCLWSM 83


>sp|SERC_METAC|PHOSPHOSERINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AFEEFLWKM 10
AFE LW M
Sbjct: 75 AFEMCLWSM 83




225|SequenceR|1130|1121|CFRGDIAFEE

>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 FRGDIAFEE 10
F+GD++FEE
Sbjct: 173 FKGDVSFEE 181


>sp|GLYA_METAR|SERINE hydroxymethyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 CFRGDIAFE 9
CF GD A+E
Sbjct: 411 CFDGDGAYE 419


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FRGDIA 7
FRGDIA
Sbjct: 417 FRGDIA 422


>sp|FOLD_METHJ|BIFUNCTIONAL protein FolD|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GDIAFEE 10
GD+AF+E
Sbjct: 234 GDVAFDE 240


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 CFRGDIAFE 9
C RGDI E
Sbjct: 323 CVRGDIVPE 331


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 CFRGDIAFE 9
C RGDI E
Sbjct: 323 CVRGDIVPE 331


>sp|XYLG_SULAC|XYLOSE/ARABINOSE import ATP-binding protein XylG|Sulfolobus acidocaldarius (strain

Query: 3 RGDIAFE 9
RGD+ FE
Sbjct: 58 RGDLVFE 64


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 CFRGDIAFEE 10
C R D+ +EE
Sbjct: 172 CRREDVTYEE 181


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 CFRGDIAFEE 10
C R D+ +EE
Sbjct: 172 CRREDVTYEE 181


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 CFRGDIAFE 9
C RGDI E
Sbjct: 323 CVRGDIVPE 331


>sp|Y1462_METJA|UNCHARACTERIZED protein MJ1462|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FRGDIAF 8
++GD+AF
Sbjct: 43 YKGDVAF 49


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CFRGDI 6
CF GDI
Sbjct: 59 CFTGDI 64


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 CFRGDIAFE 9
C RGDI E
Sbjct: 323 CVRGDIVPE 331


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 CFRGDIAFE 9
C RGDI E
Sbjct: 323 CVRGDIVPE 331


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 CFRGDIAFE 9
CF GD E
Sbjct: 873 CFHGDTLIE 881


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 CFRGDIAFE 9
C RGD+ E
Sbjct: 322 CVRGDVLSE 330


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 CFRGDIAFE 9
C RGD+ E
Sbjct: 322 CVRGDVLSE 330


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GDIAFE 9
GD+AFE
Sbjct: 91 GDVAFE 96




226|SequenceR|1135|1126|DHISICFRGD

>sp|APGM_THEAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DHISICFRGD 10
DH IC GD
Sbjct: 330 DHAVICVTGD 339


>sp|PSA_AERPE|PROTEASOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 DHISICFRG 9
DHI + F G
Sbjct: 76 DHIGVAFAG 84


>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 1 DHISICFRGD 10
DHIS GD
Sbjct: 482 DHISTLIAGD 491


>sp|FMDC_METBF|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanosarcina barkeri

Query: 1 DHISICFRG 9
DH+ +RG
Sbjct: 166 DHVGCAYRG 174




227|SequenceR|1140|1131|LYRVEDHISI

>sp|TPIS_METS3|TRIOSEPHOSPHATE isomerase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LYRVEDHISI 10
+YR++D IS+
Sbjct: 48 IYRIQDQISL 57


>sp|PSA_AERPE|PROTEASOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 LYRVEDHISI 10
+Y+++DHI +
Sbjct: 71 IYKIDDHIGV 80


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 2 YRVEDHISI 10
Y+VED+++I
Sbjct: 168 YKVEDNVAI 176


>sp|PSB_METFA|PROTEASOME subunit beta|Methanocaldococcus fervens (strain DSM 4213

Query: 1 LYRVEDHISI 10
LY+++D+I++
Sbjct: 40 LYKIDDYIAL 49


>sp|PSB_METVS|PROTEASOME subunit beta|Methanococcus vannielii (strain ATCC 35089

Query: 1 LYRVEDHISI 10
LY+++D+I++
Sbjct: 48 LYKIDDYIAM 57


>sp|PSB_METVM|PROTEASOME subunit beta|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 1 LYRVEDHISI 10
LY+++D+I++
Sbjct: 40 LYKIDDYIAM 49


>sp|PSB_METSF|PROTEASOME subunit beta|Methanocaldococcus sp. (strain FS406-22)

Query: 1 LYRVEDHISI 10
LY+++D+I++
Sbjct: 40 LYKIDDYIAM 49


>sp|PSB_METJA|PROTEASOME subunit beta|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYRVEDHISI 10
LY+++D+I++
Sbjct: 40 LYKIDDYIAM 49


>sp|PSB_METMP|PROTEASOME subunit beta|Methanococcus maripaludis (strain DSM 14266

Query: 1 LYRVEDHISI 10
LY+++D+I++
Sbjct: 48 LYKIDDYIAM 57


>sp|PSB_METM5|PROTEASOME subunit beta|Methanococcus maripaludis (strain C5 /

Query: 1 LYRVEDHISI 10
LY+++D+I++
Sbjct: 48 LYKIDDYIAM 57


>sp|PSB_METM7|PROTEASOME subunit beta|Methanococcus maripaludis (strain C7 /

Query: 1 LYRVEDHISI 10
LY+++D+I++
Sbjct: 48 LYKIDDYIAM 57


>sp|PSB_METM6|PROTEASOME subunit beta|Methanococcus maripaludis (strain C6 /

Query: 1 LYRVEDHISI 10
LY+++D+I++
Sbjct: 48 LYKIDDYIAM 57


>sp|THII_HALSA|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LYRVEDHIS 9
+YRV +H++
Sbjct: 273 MYRVAEHVA 281


>sp|THII_HALS3|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LYRVEDHIS 9
+YRV +H++
Sbjct: 273 MYRVAEHVA 281


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 VEDHIS 9
VEDHIS
Sbjct: 678 VEDHIS 683


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 LYRVEDHI 8
L RV+DHI
Sbjct: 474 LMRVQDHI 481


>sp|PSB1_THEKO|PROTEASOME subunit beta 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LYRVEDHISI 10
+++++DH++I
Sbjct: 41 VFQIDDHLAI 50


>sp|PSB1_THEGJ|PROTEASOME subunit beta 1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LYRVEDHISI 10
+++++DH++I
Sbjct: 44 VFQIDDHLAI 53


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYRVEDHIS 9
LYR+ED I+
Sbjct: 99 LYRLEDAIT 107


>sp|PYRH_HALWD|URIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 RVEDHISI 10
RVEDH ++
Sbjct: 20 RVEDHAAV 27


>sp|PSB1_THESM|PROTEASOME subunit beta 1|Thermococcus sibiricus (strain DSM 12597

Query: 1 LYRVEDHISI 10
+++V+DH+++
Sbjct: 43 IFQVDDHLAL 52


>sp|TH11_HALSA|PROBABLE transposase for insertion sequence|Halobacterium salinarum (strain

Query: 2 YRVEDHI 8
YRVED I
Sbjct: 245 YRVEDRI 251


>sp|TH11_HALS3|PROBABLE transposase for insertion sequence|Halobacterium salinarum (strain

Query: 2 YRVEDHI 8
YRVED I
Sbjct: 245 YRVEDRI 251


>sp|RADB_METST|DNA repair and recombination protein|Methanosphaera stadtmanae (strain

Query: 1 LYRVED 6
LYRVED
Sbjct: 129 LYRVED 134


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LYRVEDHISI 10
LY +E H+ +
Sbjct: 14 LYEIERHVPV 23


>sp|PSA_THESM|PROTEASOME subunit alpha|Thermococcus sibiricus (strain DSM 12597

Query: 1 LYRVEDHIS 9
+++++DHI+
Sbjct: 69 IFQIDDHIA 77


>sp|PSB1_PYRAR|PROTEASOME subunit beta 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LYRVEDHIS 9
L++++DH++
Sbjct: 35 LWKIDDHVA 43


>sp|PSA_THEON|PROTEASOME subunit alpha|Thermococcus onnurineus (strain NA1)

Query: 1 LYRVEDHIS 9
+++++DHI+
Sbjct: 69 IFQIDDHIA 77


>sp|PSA_PYRAB|PROTEASOME subunit alpha|Pyrococcus abyssi (strain GE5 /

Query: 1 LYRVEDHIS 9
+++++DHI+
Sbjct: 69 IFQIDDHIA 77


>sp|PSA_THEGJ|PROTEASOME subunit alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LYRVEDHIS 9
+++++DHI+
Sbjct: 69 IFQIDDHIA 77


>sp|PSA_PYRFU|PROTEASOME subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LYRVEDHIS 9
+++++DHI+
Sbjct: 69 IFQIDDHIA 77


>sp|PSA_HALSA|PROTEASOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 LYRVEDHI 8
L++++DH+
Sbjct: 69 LHKIDDHV 76


>sp|PSA_HALS3|PROTEASOME subunit alpha|Halobacterium salinarum (strain ATCC 29341

Query: 1 LYRVEDHI 8
L++++DH+
Sbjct: 69 LHKIDDHV 76


>sp|PSA_PYRHO|PROTEASOME subunit alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LYRVEDHIS 9
+++++DHI+
Sbjct: 69 IFQIDDHIA 77




228|SequenceR|1145|1136|DEERVLYRVE

>sp|ASPD_METTH|L-ASPARTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DEERVLYR 8
DE++VLYR
Sbjct: 158 DEKKVLYR 165


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EERVLYRVE 10
+ER+LY VE
Sbjct: 296 QERMLYAVE 304


>sp|TRPB_HALVD|TRYPTOPHAN synthase beta chain|Haloferax volcanii (strain ATCC 29605

Query: 1 DEERVLYRVE 10
DEE LY VE
Sbjct: 247 DEETALYAVE 256


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 2 EERVLYRVE 10
+ER+LY VE
Sbjct: 296 QERMLYAVE 304


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 2 EERVLYRVE 10
+ER+LY VE
Sbjct: 296 QERMLYAVE 304


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 2 EERVLYRVE 10
+ER+LY VE
Sbjct: 296 QERMLYAVE 304


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 EERVLYRVE 10
+ER+LY VE
Sbjct: 296 QERMLYAVE 304


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 EERVLYRVE 10
+ER+LY VE
Sbjct: 296 QERMLYAVE 304


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 EERVLYRVE 10
+ER+LY VE
Sbjct: 296 QERMLYAVE 304


>sp|PURQ_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DEERVLYR 8
DE+RV++R
Sbjct: 158 DEDRVIFR 165


>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DEERVLYRVE 10
D E+V+Y++E
Sbjct: 214 DFEKVMYKIE 223


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DEERVLYRVE 10
D E+V+Y++E
Sbjct: 214 DFEKVMYKIE 223


>sp|SYS_METHJ|SERINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DEERVLYRVE 10
D E+V+Y++E
Sbjct: 214 DFEKVMYKIE 223


>sp|HIS3_METMJ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DEERVLYRVE 10
DE+ +LY VE
Sbjct: 73 DEDAILYEVE 82


>sp|TRPB_METKA|TRYPTOPHAN synthase beta chain|Methanopyrus kandleri (strain AV19 /

Query: 1 DEERVLYRVE 10
DEE LY VE
Sbjct: 249 DEEVALYAVE 258


>sp|PURA_METBF|ADENYLOSUCCINATE synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DEERVLYRVE 10
D+ER L R+E
Sbjct: 151 DQERFLARLE 160




229|SequenceR|1150|1141|AARYRDEERV

>sp|RNZ_NITMS|RIBONUCLEASE Z|Nitrosopumilus maritimus (strain SCM1)

Query: 1 AARYRDE 7
+ARYRDE
Sbjct: 267 SARYRDE 273


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AARYRDEERV 10
+A+Y DEE++
Sbjct: 195 SAKYADEEQI 204


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 RYRDEER 9
RY+DE+R
Sbjct: 362 RYKDEDR 368


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 RYRDEERV 10
RYRDE R+
Sbjct: 196 RYRDEGRL 203


>sp|Y1681_ARCFU|UNCHARACTERIZED protein AF_1681|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ARYRDEE 8
ARYRD++
Sbjct: 79 ARYRDKD 85




230|SequenceR|1155|1146|IQLALAARYR

***** No hits found ******


231|SequenceR|1160|1151|TLLNTIQLAL

***** No hits found ******


232|SequenceR|1165|1156|AFMCRTLLNT

>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 4 CRTLLNT 10
C TL+NT
Sbjct: 11 CETLMNT 17




233|SequenceR|1170|1161|LGLKYAFMCR

>sp|PNPH_ARCFU|PROBABLE 6-oxopurine nucleoside phosphorylase|Archaeoglobus fulgidus (strain

Query: 1 LGLKYAFMC 9
LGL YA +C
Sbjct: 186 LGLSYAIVC 194


>sp|SERB_METJA|PHOSPHOSERINE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGLKYAFMCR 10
LGL YAF R
Sbjct: 113 LGLDYAFANR 122


>sp|Y523_ARCFU|UNCHARACTERIZED protein AF_0523|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GLKYAFM 8
GLK+AFM
Sbjct: 110 GLKWAFM 116


>sp|AGOG_PYRAE|N-GLYCOSYLASE/DNA lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LKYAFMC 9
L YA+MC
Sbjct: 149 LNYAYMC 155


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGLKYAF 7
LG+KY+F
Sbjct: 691 LGIKYSF 697


Query: 1 LGLKYAFMC 9
L LKY F C
Sbjct: 1226 LVLKYIFKC 1234


>sp|SERB_ARCFU|PHOSPHOSERINE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGLKYAF 7
LGL YAF
Sbjct: 237 LGLDYAF 243


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 1 LGLKYAFMC 9
+G+K F+C
Sbjct: 439 IGIKKGFLC 447


>sp|Y129_METJA|UNCHARACTERIZED protein MJ0129|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KYAFMCR 10
KY F+C+
Sbjct: 95 KYKFLCK 101




234|SequenceR|1175|1166|QPLDNLGLKY

>sp|TBP2_METAC|TATA-BOX-BINDING protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LDNLGLKY 10
LDNLGL Y
Sbjct: 178 LDNLGLLY 185


>sp|TBP2_METMA|TATA-BOX-BINDING protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QPLDNLGL 8
Q LDN+GL
Sbjct: 175 QQLDNMGL 182


>sp|TBP1_METAC|TATA-BOX-BINDING protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QPLDNLGL 8
Q LDN+GL
Sbjct: 175 QQLDNMGL 182


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 PLDNLGLKY 10
P++N LKY
Sbjct: 97 PIENFNLKY 105


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 3 LDNLGLKY 10
+DNLG++Y
Sbjct: 222 VDNLGVEY 229


>sp|TBP3_METMA|TATA-BOX-BINDING protein 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LDNLGLKY 10
DNLGL Y
Sbjct: 178 FDNLGLLY 185


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC

Query: 1 QPLDNLG 7
QP+DN G
Sbjct: 68 QPVDNTG 74


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 1 QPLDNLG 7
QP+DN G
Sbjct: 68 QPVDNTG 74


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 3 LDNLGLKY 10
DN+G+KY
Sbjct: 404 FDNIGVKY 411


>sp|RPO10_METTH|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanothermobacter

Query: 3 LDNLGLK 9
LD+LGLK
Sbjct: 34 LDDLGLK 40


>sp|SDX_THEAC|PROBABLE sulredoxin|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PLDNLGLK 9
P++ LGLK
Sbjct: 88 PMEKLGLK 95


>sp|TBP_METTP|TATA-BOX-BINDING protein|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QPLDNLGL 8
Q L+NLGL
Sbjct: 175 QQLENLGL 182


>sp|NADE_METJA|NH(3)-DEPENDENT NAD(+) synthetase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DNLGLKY 10
+NLG+KY
Sbjct: 79 ENLGIKY 85


>sp|Y314_METJA|UNCHARACTERIZED protein MJ0314|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LDNLGLKY 10
L+N+G KY
Sbjct: 143 LENIGFKY 150


>sp|ULIL_METAC|ULILYSIN acetivorans (strain ATCC 35395

Query: 3 LDNLGLKY 10
++NL LKY
Sbjct: 45 IENLALKY 52


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 3 LDNLGLK 9
LD+LGLK
Sbjct: 449 LDDLGLK 455


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 LDNLGL 8
LDNLGL
Sbjct: 146 LDNLGL 151




235|SequenceR|1180|1171|FFAVSQPLDN

>sp|IDI2_PYRNV|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 FFAVSQPL 8
FF +SQPL
Sbjct: 290 FFTMSQPL 297


>sp|IDI2_PYRAR|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FFAVSQPL 8
FF +SQPL
Sbjct: 288 FFTMSQPL 295


>sp|IDI2_PYRAE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FFAVSQPL 8
FF +SQPL
Sbjct: 288 FFTMSQPL 295


>sp|MCRG_METVO|METHYL-COENZYME M reductase subunit gamma|Methanococcus voltae

Query: 1 FFAVSQPLD 9
+FA SQP D
Sbjct: 95 YFAPSQPYD 103


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 3 AVSQPLDN 10
AV QPL+N
Sbjct: 167 AVEQPLEN 174




236|SequenceR|1185|1176|IDVASFFAVS

>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter

Query: 1 IDVASFFA 8
+D+ASFF+
Sbjct: 3 MDIASFFS 10


>sp|TMG10_ARCFU|TRNA (guanine(10)-N2)-dimethyltransferase|Archaeoglobus fulgidus (strain

Query: 1 IDVASFFA 8
IDV SFF+
Sbjct: 288 IDVESFFS 295


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IDVASFFA 8
ID+ +FFA
Sbjct: 506 IDIGAFFA 513




237|SequenceR|1190|1181|RLCRDIDVAS

>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLCRDIDV 8
++CRD DV
Sbjct: 183 KICRDFDV 190


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 1 RLCRDIDV 8
R CRD+D+
Sbjct: 22 RFCRDLDM 29


>sp|FOLD_METPE|BIFUNCTIONAL protein FolD|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 RLCRDIDVAS 10
+LC D+D AS
Sbjct: 231 KLCGDVDFAS 240


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LCRDIDVA 9
LCRD+D A
Sbjct: 341 LCRDMDGA 348


>sp|CAS5_ARCFU|CRISPR-ASSOCIATED protein Cas5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CRDIDVA 9
C DID+A
Sbjct: 119 CDDIDIA 125


>sp|Y1665_METJA|UPF0210 protein MJ1665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLCRDIDVAS 10
R+C ++VAS
Sbjct: 151 RVCSSVNVAS 160


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 1 RLCRDID 7
++CRD D
Sbjct: 257 KMCRDFD 263


>sp|TRUB_ARCFU|PROBABLE tRNA pseudouridine synthase B|Archaeoglobus fulgidus (strain ATCC

Query: 1 RLCRDI 6
+LCRDI
Sbjct: 169 KLCRDI 174


>sp|BRIX_METKA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanopyrus kandleri

Query: 2 LCRDIDVA 9
LCRD++ A
Sbjct: 19 LCRDLECA 26


>sp|THI4_METTP|THIAMINE thiazole synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 CRDIDVA 9
C D+DVA
Sbjct: 23 CTDVDVA 29




238|SequenceR|1195|1186|MTVEKRLCRD

>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 1 MTVEKRLCRD 10
+T+EKR+ +D
Sbjct: 445 VTIEKRVSKD 454


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 3 VEKRLCRD 10
V KRLC D
Sbjct: 188 VRKRLCPD 195


>sp|OTC_METHJ|ORNITHINE carbamoyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 MTVEKRLCR 9
MT+E+RL R
Sbjct: 139 MTIEERLFR 147


>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TVEKRLCR 9
TV+K LC+
Sbjct: 65 TVDKHLCK 72




239|SequenceR|1200|1191|PTKCDMTVEK

>sp|NNRE_NITMS|NAD(P)H-HYDRATE epimerase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 TKCDMTV 8
TKCDMTV
Sbjct: 174 TKCDMTV 180


>sp|MFNC_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate transaminase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PTKCDMTVE 9
P CD TVE
Sbjct: 137 PVFCDFTVE 145


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PTKCDMTVEK 10
P K +MTVE+
Sbjct: 599 PAKVEMTVEE 608


>sp|CYAS_METTP|CYSTEATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 KCDMTV 8
KCD+TV
Sbjct: 393 KCDLTV 398


>sp|CDC45_SACS2|CELL division control protein 45|Saccharolobus solfataricus (strain ATCC

Query: 3 KCDMTVEK 10
K DMT+EK
Sbjct: 139 KFDMTIEK 146


>sp|HDRB2_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 1 PTKCDMTVEK 10
PT DMT EK
Sbjct: 207 PTALDMTKEK 216


>sp|GFCR_METBU|TRANSCRIPTIONAL regulator GfcR|Methanococcoides burtonii (strain DSM 6242

Query: 4 CDMTVEK 10
CDM +EK
Sbjct: 76 CDMVIEK 82


>sp|MPTN_METMP|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PTKCDMTVE 9
P KC++T E
Sbjct: 219 PEKCEITEE 227


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 1 PTKCDMTVE 9
PTKC M ++
Sbjct: 216 PTKCVMVLD 224


>sp|FEN_IGNH4|FLAP endonuclease 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PTKCDMTVE 9
P+KC T+E
Sbjct: 11 PSKCKKTLE 19




240|SequenceR|1205|1196|GTPNSPTKCD

>sp|RIB7_ARCFU|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GTPNSPTKCD 10
G +SPT CD
Sbjct: 182 GGRDSPTVCD 191


>sp|Y1265_ARCFU|UPF0173 metal-dependent hydrolase AF_1265|Archaeoglobus fulgidus (strain

Query: 1 GTPNSPTK 8
G PN+P K
Sbjct: 27 GNPNAPVK 34


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 NSPTKCD 10
N+P KCD
Sbjct: 151 NNPYKCD 157


>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TPNSPTK 8
+PNSP K
Sbjct: 91 SPNSPVK 97


>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 169 TPNNPT 174


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 172 TPNNPT 177


>sp|HIS8_METST|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 165 TPNNPT 170


>sp|HIS8_METS3|HISTIDINOL-PHOSPHATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 164 TPNNPT 169


>sp|HIS8_META3|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 169 TPNNPT 174


>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 168 TPNNPT 173


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 172 TPNNPT 177


>sp|HIS8_METM6|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C6 /

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 169 TPNNPT 174


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 1 GTPNSPTKC 9
G P PT C
Sbjct: 302 GLPGYPTSC 310


>sp|HIS8_METMP|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 169 TPNNPT 174


>sp|HIS8_METM7|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C7 /

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 169 TPNNPT 174


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 169 TPNNPT 174


>sp|DTDA_KORCO|D-AMINOACYL-TRNA deacylase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GTPNSP 6
GTPN P
Sbjct: 69 GTPNHP 74


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 GTPNSP 6
G PNSP
Sbjct: 164 GAPNSP 169


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 GTPNSPTKCD 10
G P SP K D
Sbjct: 722 GLPPSPPKID 731


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 1 GTPNSP 6
G PNSP
Sbjct: 164 GAPNSP 169


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GTPNSP 6
G PNSP
Sbjct: 164 GAPNSP 169


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 GTPNSP 6
G PNSP
Sbjct: 164 GAPNSP 169


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 GTPNSPTKCD 10
GTP SP + D
Sbjct: 5495 GTPESPYEID 5504


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GTPNSP 6
G PNSP
Sbjct: 164 GAPNSP 169


>sp|Y3405_METJA|UNCHARACTERIZED protein MJECS05|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TPNSPTKC 9
T N+PT C
Sbjct: 112 TSNNPTLC 119


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 156 TPNNPT 161


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 189 TPNNPT 194


>sp|HIS8_METLZ|HISTIDINOL-PHOSPHATE aminotransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 TPNSPT 7
TPN+PT
Sbjct: 159 TPNNPT 164


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GTPNSP 6
G PNSP
Sbjct: 167 GAPNSP 172


>sp|Y257_ARCFU|UNCHARACTERIZED protein AF_0257|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TPNSPTKCD 10
TPN P K +
Sbjct: 12 TPNYPVKAE 20




241|SequenceR|1210|1201|YRREMGTPNS

>sp|LEUC_THEKO|3-ISOPROPYLMALATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 YRREMGTPNS 10
+R MG+PNS
Sbjct: 345 FRGRMGSPNS 354


>sp|PUR2_METBU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 YRREMGTP 8
+RR++GTP
Sbjct: 410 FRRDIGTP 417


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 1 YRREMGTPNS 10
++ EMGTP S
Sbjct: 17 FQSEMGTPGS 26


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 YRREMGTPNS 10
++ EMGTP S
Sbjct: 17 FQSEMGTPGS 26


>sp|AATC_METS3|A-TYPE ATP synthase subunit C|Methanobrevibacter smithii (strain ATCC

Query: 2 RREMGTPNS 10
+RE G PNS
Sbjct: 369 KREAGFPNS 377


>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YRREMGTPNS 10
+R MG+PN+
Sbjct: 345 FRGRMGSPNA 354


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 1 YRREMGTPNS 10
++ EMGTP S
Sbjct: 17 FQSEMGTPGS 26


>sp|PUR2_METMJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YRREMGTPN 9
+RR++GTP
Sbjct: 409 HRRDIGTPE 417


>sp|GGR_ARCFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RREMGTP 8
R+E+GTP
Sbjct: 33 RQEIGTP 39


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 2 RREMGTPN 9
+R MG PN
Sbjct: 70 KRHMGEPN 77


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 3 REMGTP 8
RE+GTP
Sbjct: 830 RELGTP 835


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 1 YRREMGTPNS 10
+R E+G P+S
Sbjct: 303 FRNEVGLPDS 312


>sp|RS8E_METVS|SMALL ribosomal subunit protein eS8|Methanococcus vannielii (strain

Query: 1 YRREMGTP 8
++REMG P
Sbjct: 24 HKREMGRP 31


>sp|RS8E_METMP|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 1 YRREMGTP 8
++REMG P
Sbjct: 24 HKREMGRP 31


>sp|RS8E_METM5|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 1 YRREMGTP 8
++REMG P
Sbjct: 24 HKREMGRP 31


>sp|RS8E_METM7|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 1 YRREMGTP 8
++REMG P
Sbjct: 24 HKREMGRP 31


>sp|RS8E_METM6|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 1 YRREMGTP 8
++REMG P
Sbjct: 24 HKREMGRP 31


>sp|PUR2_THEGJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 YRREMGTPNS 10
YRR++GT S
Sbjct: 409 YRRDVGTRKS 418


>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 REMGTPN 9
RE+G PN
Sbjct: 77 RELGQPN 83




242|SequenceR|1215|1206|GQPIGYRREM

>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 GQPIGY 6
GQPIGY
Sbjct: 321 GQPIGY 326


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GQPIGY 6
GQPIGY
Sbjct: 321 GQPIGY 326


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GQPIGY 6
GQPIGY
Sbjct: 321 GQPIGY 326


>sp|MOAA_PYRAE|PROBABLE GTP 3',8-cyclase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GQPIGYRREM 10
G+P G R+E+
Sbjct: 217 GRPAGVRKEL 226


>sp|PYRE_SULTO|OROTATE phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 1 GQPIGYRR 8
G+P+GY R
Sbjct: 80 GKPLGYIR 87


>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 3 PIGYRREM 10
P GYR +M
Sbjct: 145 PCGYRSQM 152


>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GQPIGYRREM 10
GQP Y R++
Sbjct: 319 GQPRAYNRDL 328


>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 3 PIGYRREM 10
P GYR +M
Sbjct: 157 PCGYRTQM 164


>sp|Y1756_METM5|UNCHARACTERIZED solute-binding protein MmarC5_1756|Methanococcus maripaludis

Query: 3 PIGYRREM 10
P GYR +M
Sbjct: 160 PCGYRTQM 167


>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PIGYRREM 10
P GYR +M
Sbjct: 159 PCGYRTQM 166


>sp|Y954_METVS|UNCHARACTERIZED solute-binding protein Mevan_0954|Methanococcus vannielii (strain

Query: 3 PIGYRREM 10
P GYR +M
Sbjct: 143 PCGYRTQM 150


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 GQPIGYRREM 10
G+ +GY +EM
Sbjct: 506 GKKLGYVKEM 515


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 GQPIGYRREM 10
G+ +GY +EM
Sbjct: 506 GKKLGYVKEM 515


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 GQPIGYRREM 10
G+ +GY +EM
Sbjct: 506 GKKLGYVKEM 515


>sp|Y280_METAC|UNCHARACTERIZED solute-binding protein MA_0280|Methanosarcina acetivorans (strain

Query: 3 PIGYRREM 10
P GYR +M
Sbjct: 162 PAGYRSQM 169


>sp|SPH2_HALSA|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 700922

Query: 1 GQPIGYRREM 10
GQP+ RR++
Sbjct: 110 GQPVTERRDL 119


>sp|SPH2_HALS3|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 29341

Query: 1 GQPIGYRREM 10
GQP+ RR++
Sbjct: 110 GQPVTERRDL 119


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 1 GQPIGYR 7
G P+GYR
Sbjct: 519 GVPVGYR 525


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GQPIGY 6
GQPIG+
Sbjct: 321 GQPIGH 326


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GQPIGYRR 8
G+P+ YRR
Sbjct: 353 GEPLIYRR 360


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 GQPIGY 6
GQPIG+
Sbjct: 321 GQPIGH 326


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 1 GQPIGY 6
GQPIG+
Sbjct: 321 GQPIGH 326


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 IGYRRE 9
+GYRRE
Sbjct: 424 LGYRRE 429


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GQPIGY 6
GQPIG+
Sbjct: 321 GQPIGH 326


>sp|DPHB_METBF|DIPHTHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GQPIGYRREM 10
G P+G+ +E+
Sbjct: 256 GGPVGFMKEV 265


>sp|CAS1B_METHJ|PUTATIVE CRISPR-associated endonuclease Cas1 2|Methanospirillum hungatei

Query: 1 GQPIGY 6
G+P+GY
Sbjct: 64 GEPVGY 69




243|SequenceR|1220|1211|IDLAEGQPIG

>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 IDLAEGQPIG 10
I + EGQP+G
Sbjct: 270 IAVGEGQPLG 279


>sp|KPYK_THELN|PYRUVATE kinase|Thermococcus litoralis (strain ATCC 51850

Query: 3 LAEGQPIG 10
L EG+PIG
Sbjct: 454 LTEGRPIG 461


>sp|RL5_HALMA|LARGE ribosomal subunit protein uL5|Haloarcula marismortui (strain ATCC

Query: 2 DLAEGQPIG 10
D+ EG PIG
Sbjct: 63 DIREGDPIG 71


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLAEGQPIG 10
++AEG P+G
Sbjct: 38 EIAEGTPLG 46


>sp|SECD_METJA|PROTEIN-EXPORT membrane protein SecD|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DLAEGQP 8
DLA+G+P
Sbjct: 183 DLADGKP 189


>sp|SUCC_HALLT|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halorubrum lacusprofundi (strain

Query: 1 IDLAEGQPI 9
+D EGQP+
Sbjct: 106 MDRGEGQPV 114


>sp|RL5_METLZ|LARGE ribosomal subunit protein uL5|Methanocorpusculum labreanum

Query: 3 LAEGQPIG 10
+ +GQPIG
Sbjct: 55 IRKGQPIG 62


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 IDLAEGQPIG 10
I + +GQP+G
Sbjct: 271 IAVGDGQPLG 280


>sp|MDH_NITMS|MALATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 IDLAEGQPIG 10
+D+AEG P G
Sbjct: 30 LDVAEGLPQG 39




244|SequenceR|1225|1216|EIIQYIDLAE

>sp|KGSDH_HALVD|ALPHA-KETOGLUTARATE semialdehyde dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 3 IQYIDLAE 10
++YID+AE
Sbjct: 334 LEYIDIAE 341


>sp|OGT_METS5|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EIIQYIDLAE 10
E++ Y D+AE
Sbjct: 87 EVVTYKDIAE 96


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EIIQYIDLAE 10
E+++Y+D+A+
Sbjct: 65 EVLKYVDVAD 74


>sp|ENO_METS5|ENOLASE sedula (strain ATCC 51363

Query: 1 EIIQYIDLAE 10
E IQ+ DLA+
Sbjct: 342 ETIQFFDLAK 351


>sp|RAD50_THEVO|DNA double-strand break repair Rad50|Thermoplasma volcanium (strain

Query: 1 EIIQYIDLAE 10
EII+YI+L +
Sbjct: 296 EIIEYINLKK 305


>sp|RS27_ARCFU|SMALL ribosomal subunit protein eS27|Archaeoglobus fulgidus (strain

Query: 1 EIIQYIDLAE 10
EII+Y+D E
Sbjct: 49 EIIEYVDQIE 58


>sp|Y1976_SACS2|UPF0145 protein SSO1976|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EIIQYIDLAE 10
EI +Y++LAE
Sbjct: 53 EIKEYVELAE 62


>sp|Y1080_SULTO|UPF0145 protein STK_10800|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EIIQYIDLAE 10
EI +Y+++AE
Sbjct: 53 EIKEYVEMAE 62




245|SequenceR|1230|1221|SGKTLEIIQY

>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii

Query: 1 SGKTLEIIQY 10
+G+ +EII Y
Sbjct: 13 TGRNMEIINY 22


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 2 GKTLEIIQY 10
GKT EII Y
Sbjct: 217 GKTEEIIDY 225


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 SGKTLEII 8
SGKT EI+
Sbjct: 287 SGKTFEIL 294


>sp|Y655_ARCFU|METALLOPROTEASE AF_0655|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SGKTLEIIQ 9
SG TLEI++
Sbjct: 377 SGNTLEILR 385


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GKTLEIIQ 9
GKTLE+I+
Sbjct: 116 GKTLEMIK 123


>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 1 SGKTLEIIQ 9
SGKTLE ++
Sbjct: 24 SGKTLENVE 32


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 1 SGKTLEII 8
SGKT EI+
Sbjct: 323 SGKTAEIL 330


>sp|GLMS_SULAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfolobus acidocaldarius (strain

Query: 1 SGKTLEIIQ 9
SG+TL+++Q
Sbjct: 347 SGETLDLLQ 355


>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SGKTLEII 8
+GKT+E+I
Sbjct: 250 NGKTIELI 257




246|SequenceR|1239|1226|PGPQSRKELSGKTL

>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PQSRKELSGK 12
P+ R+EL+GK
Sbjct: 735 PEERRELAGK 744


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 2 GPQSRKELSGKTL 14
G + +KEL+GK L
Sbjct: 149 GNEEQKELAGKYL 161


>sp|FEN_METST|FLAP endonuclease 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PGPQSRKELSGKTL 14
P P KEL GK L
Sbjct: 11 PEPIEMKELEGKIL 24


>sp|PYRB_SULAC|ASPARTATE carbamoyltransferase catalytic subunit|Sulfolobus acidocaldarius

Query: 5 SRKELSGKTL 14
+RK LSGKT+
Sbjct: 32 TRKILSGKTI 41


>sp|TRMBR_THELN|HTH-TYPE sugar sensing transcriptional regulator|Thermococcus litoralis

Query: 2 GPQSRKELSGKT 13
GP + KE+S K+
Sbjct: 31 GPSTAKEISTKS 42


>sp|TRMBR_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus

Query: 2 GPQSRKELSGKT 13
GP + KE+S K+
Sbjct: 31 GPSTAKEISTKS 42


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGPQSRK 7
PGP++RK
Sbjct: 11 PGPKARK 17


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 3 PQSRKELSGKTL 14
P+ R+E+ GKT+
Sbjct: 124 PREREEVFGKTV 135


>sp|AROD_THEVO|3-DEHYDROQUINATE dehydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 6 RKELSGK 12
RKE+SGK
Sbjct: 171 RKEISGK 177


>sp|RL2_AERPE|LARGE ribosomal subunit protein uL2|Aeropyrum pernix (strain ATCC

Query: 1 PGPQSRKELSGKTL 14
PGP LSG TL
Sbjct: 25 PGPAKYPPLSGDTL 38


>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 5 SRKELSGK 12
S+KELSGK
Sbjct: 346 SQKELSGK 353


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 2 GPQSRKELSGKTL 14
GP R+ GK L
Sbjct: 19 GPSVRRRFEGKLL 31


>sp|RS10_ARCFU|SMALL ribosomal subunit protein uS10|Archaeoglobus fulgidus (strain

Query: 2 GPQSRKELSG 11
GP++R +LSG
Sbjct: 5 GPKARIKLSG 14


>sp|ILVC_METLZ|KETOL-ACID reductoisomerase (NADP(+))|Methanocorpusculum labreanum (strain

Query: 7 KELSGKTL 14
K+LSGKT+
Sbjct: 13 KDLSGKTI 20


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 4 QSRKELSGKTL 14
+ +K+LSG+T+
Sbjct: 345 EYKKDLSGRTV 355


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 2 GPQSRKELS 10
GPQ R+E S
Sbjct: 902 GPQRRRESS 910


>sp|PYLS_METBF|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GPQSRKELSGK 12
GP RKE GK
Sbjct: 291 GPCYRKESDGK 301


>sp|PYLS_METBA|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri

Query: 2 GPQSRKELSGK 12
GP RKE GK
Sbjct: 291 GPCYRKESDGK 301


>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 2 GPQSRKELSGK 12
GP RKE GK
Sbjct: 350 GPCYRKESDGK 360


>sp|PYLS_METMA|PYRROLYSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GPQSRKELSGK 12
GP RKE GK
Sbjct: 326 GPCYRKESDGK 336




THE END