DJC13_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|LDKNERIINM

>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DKNERIINM 10
DK ER++NM
Sbjct: 76 DKLERLMNM 84


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LDKNERIINM 10
L+KNERI+ +
Sbjct: 555 LEKNERILKL 564


>sp|Y1516_METJA|UNCHARACTERIZED protein MJ1516|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDKNERII 8
+DKN+RI+
Sbjct: 19 MDKNQRIV 26


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 1 LDKNERIINM 10
+DK+ R+I M
Sbjct: 467 IDKDRRVIGM 476


>sp|DPCKG_SULTO|GTP-DEPENDENT dephospho-CoA kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LDKNER 6
LDKNER
Sbjct: 97 LDKNER 102


>sp|Y1371_METJA|UNCHARACTERIZED methyltransferase MJ1371|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DKNERI 7
DKNERI
Sbjct: 100 DKNERI 105


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LDKNERIINM 10
L+K ERII +
Sbjct: 553 LEKTERIIEI 562




2|SequenceR|15|6|TYFCALDKNE

>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 YFCALDKNE 10
Y C D NE
Sbjct: 194 YMCTCDNNE 202


>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 1 TYFCALDKNE 10
TYF ALD +
Sbjct: 589 TYFVALDTED 598


>sp|COPZ_ARCFU|COPPER chaperone CopZ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YFCALDKNE 10
YFC+L+ E
Sbjct: 36 YFCSLESCE 44


>sp|TMPS_METJA|THYMIDYLATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FCALDKNE 10
FC+L+K E
Sbjct: 151 FCSLEKKE 158




3|SequenceR|20|11|WSHKTTYFCA

>sp|UPPS_METMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina mazei

Query: 2 SHKTTYFCA 10
S TYFCA
Sbjct: 226 SECATYFCA 234


>sp|UPPS_METAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 2 SHKTTYFCA 10
S TYFCA
Sbjct: 226 SECATYFCA 234


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WSHKTTYFC 9
W +T ++C
Sbjct: 162 WKEETVHYC 170


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WSHKTTYF 8
W H+ YF
Sbjct: 408 WDHRFFYF 415


>sp|KPYK_METJA|PYRUVATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SHKTTYFC 9
SH TT +C
Sbjct: 37 SHATTDYC 44


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 4 KTTYFC 9
KTT++C
Sbjct: 26 KTTFYC 31


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 1 WSHKTTYFCA 10
WS Y CA
Sbjct: 329 WSETLAYDCA 338


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WSHKTTYF 8
W H TY+
Sbjct: 477 WGHFVTYY 484


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WSHKTTYF 8
W H TY+
Sbjct: 491 WGHFITYY 498




4|SequenceR|25|16|KYKGRWSHKT

>sp|WTPC_THEKO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Thermococcus kodakarensis (strain

Query: 1 KYKGRWS 7
K KGRWS
Sbjct: 308 KAKGRWS 314


>sp|Y137_METJA|UNCHARACTERIZED protein MJ0137|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KGRWSH 8
+GRW+H
Sbjct: 226 EGRWTH 231


>sp|TDXH_SACS2|PEROXIREDOXIN solfataricus (strain ATCC 35092

Query: 2 YKGRW 6
YKGRW
Sbjct: 31 YKGRW 35


>sp|TDXH1_THEAC|PEROXIREDOXIN 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KYKGRW 6
+YKGRW
Sbjct: 31 QYKGRW 36


>sp|RL22_STAMF|LARGE ribosomal subunit protein uL22|Staphylothermus marinus (strain

Query: 1 KYKGRWSHK 9
+YKG+ SHK
Sbjct: 64 RYKGKLSHK 72


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 1 KYKGRW 6
++KGRW
Sbjct: 25 EFKGRW 30


>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 5 RWSHKT 10
RW HKT
Sbjct: 171 RWIHKT 176


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans

Query: 1 KYKGRWSHK 9
+Y+ +WS+K
Sbjct: 51 RYREKWSYK 59


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus

Query: 3 KGRWS 7
KGRWS
Sbjct: 73 KGRWS 77


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 3 KGRWSHKT 10
K +W H T
Sbjct: 216 KAKWGHPT 223


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 3 KGRWSHKT 10
K +W H T
Sbjct: 216 KAKWGHPT 223


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KYKGRWSHKT 10
KY G SH T
Sbjct: 117 KYGGHISHNT 126


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KYKGRWSHKT 10
KY G SH T
Sbjct: 117 KYGGHISHNT 126


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KYKGRWSHKT 10
KY G SH T
Sbjct: 117 KYGGHISHNT 126


>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 2 YKGRW 6
YKG+W
Sbjct: 26 YKGKW 30


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 1 KYKGRWSHKT 10
+Y WSH T
Sbjct: 423 EYLDSWSHGT 432


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 1 KYKGRWSHKT 10
+Y WSH T
Sbjct: 423 EYLDSWSHGT 432


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 1 KYKGRWSH 8
KY+GR+ H
Sbjct: 291 KYQGRFKH 298


>sp|GLYA_PYRAE|SERINE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KYKGRWSHKT 10
KY G SH T
Sbjct: 117 KYGGHISHNT 126


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KYKGRWSH 8
KY+GR+ H
Sbjct: 291 KYQGRFKH 298


>sp|CS3HD_THETK|CRISPR-ASSOCIATED endonuclease Cas3-HD|Thermoproteus tenax (strain ATCC 35583

Query: 2 YKGRWSHK 9
Y GRW K
Sbjct: 33 YYGRWMEK 40


>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 2 YKGRW 6
YKG+W
Sbjct: 30 YKGKW 34


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KGRWSHK 9
KG+W +K
Sbjct: 168 KGKWKYK 174


>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 1 KYKGRWSHK 9
+Y+ W HK
Sbjct: 105 RYRVNWRHK 113




5|SequenceR|30|21|VSFVRKYKGR

>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VSFVRKYKGR 10
+ F+R YKG+
Sbjct: 194 MDFIRPYKGK 203


>sp|KPTA_THEAC|PROBABLE RNA 2'-phosphotransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 VSFVRKYKG 9
V+ +RKYKG
Sbjct: 66 VTVLRKYKG 74


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 1 VSFVRKYKG 9
VS+VR Y G
Sbjct: 225 VSYVRSYNG 233


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 FVRKYKGR 10
+VR+Y GR
Sbjct: 127 YVRRYGGR 134


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VRKYKG 9
+RKYKG
Sbjct: 503 IRKYKG 508


>sp|COBQ_METTH|PROBABLE cobyric acid synthase|Methanothermobacter thermautotrophicus

Query: 5 RKYKGR 10
RKY+GR
Sbjct: 245 RKYRGR 250


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VSFVRKYKGR 10
+ F R Y GR
Sbjct: 118 IKFARAYTGR 127


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 VRKYKGR 10
+R+YKGR
Sbjct: 752 LRRYKGR 758


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VSFVRKYKGR 10
V F +KYKG+
Sbjct: 60 VRFPKKYKGQ 69


>sp|Y365_METJA|UNCHARACTERIZED protein MJ0365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSFVRKYKGR 10
+ RKY+GR
Sbjct: 81 IKHFRKYQGR 90




6|SequenceR|35|26|IAHTGVSFVR

>sp|TRUD_ARCFU|PROBABLE tRNA pseudouridine synthase D|Archaeoglobus fulgidus (strain ATCC

Query: 1 IAHTGVSF 8
I HTG+SF
Sbjct: 376 IEHTGLSF 383


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 IAHTGVSFVR 10
+ TGV+FVR
Sbjct: 477 VQETGVNFVR 486


>sp|HIS8_METBU|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcoides burtonii (strain DSM 6242

Query: 2 AHTGVSFVR 10
AH G+S +R
Sbjct: 333 AHAGLSLIR 341


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 3 HTGVSFVR 10
H GVSFV+
Sbjct: 36 HEGVSFVQ 43


>sp|Y1459_PYRHO|PUTATIVE sugar kinase PH1459|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 HTGVSFVR 10
HTG+ FV+
Sbjct: 90 HTGIVFVQ 97


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 3 HTGVSFV 9
H GVSFV
Sbjct: 41 HIGVSFV 47


>sp|THPR_AERPE|RNA 2',3'-cyclic phosphodiesterase|Aeropyrum pernix (strain ATCC

Query: 1 IAHTGVSF 8
IAHTGV
Sbjct: 12 IAHTGVPM 19




7|SequenceR|40|31|PNYTTIAHTG

>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii

Query: 1 PNYTTIAH 8
P YTT+A+
Sbjct: 41 PQYTTVAY 48


>sp|AROB_THEKO|3-DEHYDROQUINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PNYTTIAH 8
PN+ IAH
Sbjct: 142 PNFVLIAH 149


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NYTTIAHTG 10
NY IAH G
Sbjct: 224 NYVGIAHDG 232


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NYTTIAHTG 10
NY IAH G
Sbjct: 225 NYIGIAHDG 233


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 2 NYTTIAHTG 10
NY IAH G
Sbjct: 224 NYIGIAHDG 232


>sp|BIOD_METVS|ATP-DEPENDENT dethiobiotin synthetase BioD|Methanococcus vannielii (strain ATCC

Query: 1 PNYTTIAHT 9
PN TI HT
Sbjct: 137 PNLGTINHT 145


>sp|BIOD_METJA|ATP-DEPENDENT dethiobiotin synthetase BioD|Methanocaldococcus jannaschii (strain

Query: 1 PNYTTIAHT 9
PN TI HT
Sbjct: 141 PNLGTINHT 149


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 2 NYTTIAHTG 10
NY IAH G
Sbjct: 224 NYIGIAHDG 232


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 NYTTIAHTG 10
N+T+ AHT
Sbjct: 408 NFTSAAHTA 416


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 NYTTIAHT 9
N+T+ AHT
Sbjct: 393 NFTSAAHT 400


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NYTTIAH 8
NYT I H
Sbjct: 306 NYTVITH 312


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 NYTTIAHT 9
N+T+ AHT
Sbjct: 393 NFTSAAHT 400


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PNYTTIAHTG 10
PN TI H G
Sbjct: 524 PNCGTIVHRG 533


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 NYTTIAHT 9
N+T+ AHT
Sbjct: 393 NFTSAAHT 400




8|SequenceR|45|36|VELTNPNYTT

>sp|RS2_METTH|SMALL ribosomal subunit protein uS2|Methanothermobacter

Query: 3 LTNPNY 8
LTNPNY
Sbjct: 100 LTNPNY 105


>sp|THII_ARCFU|PROBABLE tRNA sulfurtransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VELTNPNYT 9
V+LTNP+ T
Sbjct: 129 VDLTNPDVT 137


>sp|DHAS_ARCFU|ASPARTATE-SEMIALDEHYDE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LTNPNYTT 10
+TNPN TT
Sbjct: 143 VTNPNCTT 150


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 VELTNPN 7
+E+TNPN
Sbjct: 486 IEVTNPN 492


>sp|Y1330_METJA|UNCHARACTERIZED protein MJ1330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELTNPNYTT 10
+L+NPN +T
Sbjct: 29 QLSNPNVST 37


>sp|SRP54_METVS|SIGNAL recognition particle 54 kDa|Methanococcus vannielii (strain ATCC

Query: 2 ELTNPN 7
E+TNPN
Sbjct: 208 EITNPN 213


>sp|DEOC_PYRNV|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 ELTNPNYTT 10
+L NP Y+T
Sbjct: 159 QLGNPTYST 167


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 NPNYTT 10
NPNY T
Sbjct: 498 NPNYAT 503


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 2 ELTNPNYTT 10
E+TNP Y T
Sbjct: 126 EVTNPLYET 134


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VELTNPNYTT 10
VE T P+Y T
Sbjct: 66 VERTGPDYVT 75


>sp|G1PDH_METM5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C5 /

Query: 1 VELTNPNYTT 10
V LT P+Y T
Sbjct: 111 VSLTQPSYMT 120


>sp|SRP54_METMP|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain DSM

Query: 2 ELTNPN 7
+LTNPN
Sbjct: 208 DLTNPN 213


>sp|SRP54_METM6|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C6 /

Query: 2 ELTNPN 7
+LTNPN
Sbjct: 208 DLTNPN 213


>sp|SRP54_METM5|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C5 /

Query: 2 ELTNPN 7
+LTNPN
Sbjct: 208 DLTNPN 213


>sp|G1PDH_METM7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C7 /

Query: 1 VELTNPNYTT 10
V LT P+Y T
Sbjct: 111 VSLTQPSYMT 120


>sp|M556_METJA|METHYLATED protein MJ0556|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VELTNPNYTT 10
V L NP YTT
Sbjct: 90 VMLKNPPYTT 99


>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LTNPNYTT 10
+TNPN +T
Sbjct: 152 ITNPNCST 159


>sp|G1PDH_METMP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain DSM 14266

Query: 1 VELTNPNYTT 10
V LT P+Y T
Sbjct: 111 VSLTQPSYMT 120


>sp|RS2_HALWD|SMALL ribosomal subunit protein uS2|Haloquadratum walsbyi (strain DSM

Query: 3 LTNPNY 8
LTNP+Y
Sbjct: 186 LTNPDY 191


>sp|RS2_HALSA|SMALL ribosomal subunit protein uS2|Halobacterium salinarum (strain ATCC

Query: 3 LTNPNY 8
LTNP+Y
Sbjct: 156 LTNPDY 161


>sp|RS2_HALS3|SMALL ribosomal subunit protein uS2|Halobacterium salinarum (strain ATCC

Query: 3 LTNPNY 8
LTNP+Y
Sbjct: 156 LTNPDY 161


>sp|RS2_NATPD|SMALL ribosomal subunit protein uS2|Natronomonas pharaonis (strain ATCC

Query: 3 LTNPNY 8
LTNP+Y
Sbjct: 184 LTNPDY 189


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 VELTNPN 7
+E+TNPN
Sbjct: 512 IEVTNPN 518


>sp|G1PDH_METM6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C6 /

Query: 1 VELTNPNYTT 10
V LT P+Y T
Sbjct: 111 VSLTQPSYMT 120


>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ELTNPNYT 9
+L +PNYT
Sbjct: 184 KLEDPNYT 191




9|SequenceR|50|41|PWQNTVELTN

>sp|PYRDB_SACS2|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Saccharolobus solfataricus

Query: 1 PWQNTVEL 8
PW N +EL
Sbjct: 155 PWDNVIEL 162


>sp|TRPF_METM7|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C7 /

Query: 2 WQNTVELTN 10
W+N ++LTN
Sbjct: 64 WENIIKLTN 72


>sp|PYRDB_SULAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Sulfolobus acidocaldarius

Query: 1 PWQNTVEL 8
PW N VE+
Sbjct: 156 PWDNIVEI 163


>sp|TRPF_METVS|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus vannielii (strain ATCC 35089

Query: 2 WQNTVELT 9
W+N +ELT
Sbjct: 64 WKNIIELT 71


>sp|TRPF_METM5|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C5 /

Query: 2 WQNTVELT 9
W+N +ELT
Sbjct: 64 WENIIELT 71


>sp|TRPF_METM6|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C6 /

Query: 2 WQNTVELT 9
W+N +ELT
Sbjct: 64 WENIIELT 71


>sp|MIG_AERPE|THYMINE-DNA glycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PWQNTVE 7
PW+NT +
Sbjct: 29 PWRNTAD 35


>sp|HIS4_ARCFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Archaeoglobus fulgidus (strain

Query: 2 WQNTVELT 9
W+ VELT
Sbjct: 139 WKEVVELT 146


>sp|SLAB_SACS2|S-LAYER protein B|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WQNTVELT 9
WQ TVE+T
Sbjct: 104 WQITVEVT 111


>sp|BAST_HALS3|TRANSDUCER protein BasT|Halobacterium salinarum (strain ATCC 29341

Query: 1 PWQNTVE 7
PW +T+E
Sbjct: 145 PWLSTIE 151




10|SequenceR|55|46|CIDGYPWQNT

>sp|FTRL_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Archaeoglobus fulgidus (strain ATCC

Query: 1 CIDGYPWQN 9
C DGY W++
Sbjct: 127 CGDGYEWED 135


>sp|COFE_METTH|COENZYME F420:L-glutamate ligase|Methanothermobacter thermautotrophicus

Query: 2 IDGYPW 7
I GYPW
Sbjct: 224 IRGYPW 229


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 4 GYPWQ 8
GYPW+
Sbjct: 545 GYPWE 549


>sp|FTRL_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter

Query: 1 CIDGYPW 7
C DGY W
Sbjct: 125 CGDGYEW 131


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 CIDGYPW 7
C DG PW
Sbjct: 236 CNDGDPW 242


>sp|Y1308_PYRFU|PUTATIVE antitoxin PF1308|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CIDGYPWQ 8
C YPW+
Sbjct: 12 CFTTYPWK 19


>sp|CRUF_HALJT|BISANHYDROBACTERIORUBERIN hydratase|Haloarcula japonica (strain ATCC 49778

Query: 4 GYPWQN 9
G PWQN
Sbjct: 199 GVPWQN 204


>sp|NADM_THEAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IDGYPWQN 9
I G PW+N
Sbjct: 141 IAGEPWEN 148


>sp|FTRL_METTM|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter marburgensis

Query: 1 CIDGYPW 7
C DGY W
Sbjct: 125 CGDGYEW 131


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 1 CIDGYPWQ 8
C+DGY ++
Sbjct: 132 CVDGYKFE 139


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 3 DGYPWQN 9
D YPW +
Sbjct: 561 DDYPWND 567


>sp|HTR4_HALSA|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 700922

Query: 2 IDGYPW 7
+DG PW
Sbjct: 271 VDGTPW 276


>sp|HTR4_HALS3|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 29341

Query: 2 IDGYPW 7
+DG PW
Sbjct: 271 VDGTPW 276


>sp|NADM_PYRFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IDGYPWQN 9
I+G PW++
Sbjct: 139 IEGEPWED 146


>sp|Y643_PYRHO|UNCHARACTERIZED protein PH0643|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GYPW 7
GYPW
Sbjct: 119 GYPW 122


>sp|Y1397_PYRAB|UNCHARACTERIZED protein PYRAB13970|Pyrococcus abyssi (strain GE5 /

Query: 4 GYPW 7
GYPW
Sbjct: 114 GYPW 117


>sp|PURQ_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Picrophilus torridus (strain ATCC 700027

Query: 4 GYPW 7
GYPW
Sbjct: 187 GYPW 190


>sp|PURQ_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GYPW 7
GYPW
Sbjct: 210 GYPW 213


>sp|HTR2_HALSA|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC 700922

Query: 2 IDGYPW 7
+DG PW
Sbjct: 256 VDGAPW 261


>sp|HTR2_HALS3|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC 29341

Query: 2 IDGYPW 7
+DG PW
Sbjct: 256 VDGAPW 261


>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 2 IDGYPWQ 8
I G PWQ
Sbjct: 276 IGGAPWQ 282


>sp|SURE_METVS|5'-NUCLEOTIDASE SurE|Methanococcus vannielii (strain ATCC 35089

Query: 2 IDGYP 6
IDGYP
Sbjct: 216 IDGYP 220


>sp|SURE_METJA|5'-NUCLEOTIDASE SurE|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IDGYP 6
IDGYP
Sbjct: 215 IDGYP 219


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 IDGYP 6
IDGYP
Sbjct: 81 IDGYP 85


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 2 IDGYP 6
IDGYP
Sbjct: 81 IDGYP 85


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 CIDGYPWQN 9
CIDG P ++
Sbjct: 229 CIDGEPTES 237


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 CIDGYP 6
CIDG P
Sbjct: 210 CIDGEP 215


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 CIDGYP 6
CIDG P
Sbjct: 213 CIDGEP 218


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 CIDGYP 6
CIDG P
Sbjct: 216 CIDGEP 221


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 CIDGYP 6
CIDG P
Sbjct: 214 CIDGEP 219


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 CIDGYP 6
CIDG P
Sbjct: 217 CIDGEP 222


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 CIDGYP 6
CIDG P
Sbjct: 216 CIDGEP 221


>sp|NADM_METB6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 4 GYPWQN 9
G PW+N
Sbjct: 137 GEPWEN 142


>sp|MIG_AERPE|THYMINE-DNA glycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 6 PWQNT 10
PW+NT
Sbjct: 29 PWRNT 33


>sp|TSR3_METS3|16S rRNA aminocarboxypropyltransferase|Methanobrevibacter smithii

Query: 2 IDGYPWQNT 10
+DG+ W +T
Sbjct: 130 LDGFKWGHT 138


>sp|RS4_METPE|SMALL ribosomal subunit protein uS4|Methanosphaerula palustris (strain

Query: 4 GYPWQNT 10
GYP +NT
Sbjct: 2 GYPGKNT 8


>sp|RS4_METLZ|SMALL ribosomal subunit protein uS4|Methanocorpusculum labreanum

Query: 4 GYPWQNT 10
GYP +NT
Sbjct: 2 GYPGKNT 8


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 2 IDGYPW 7
+DG PW
Sbjct: 103 LDGEPW 108


>sp|Y1574_ARCFU|UNCHARACTERIZED protein AF_1574|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GYPW 7
GYPW
Sbjct: 377 GYPW 380




11|SequenceR|60|51|VPSISCIDGY

>sp|DPCKG_METMJ|GTP-DEPENDENT dephospho-CoA kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VPSISCIDGY 10
VP I+ IDGY
Sbjct: 52 VPDIAIIDGY 61


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 1 VPSISCIDGY 10
+PS+ C+DG+
Sbjct: 160 LPSMVCLDGF 169


>sp|PORA_METTM|PYRUVATE synthase subunit PorA|Methanothermobacter marburgensis (strain ATCC

Query: 1 VPSISCIDGY 10
+PS+ C+DG+
Sbjct: 160 LPSMVCLDGF 169


>sp|DPCKG_METPE|GTP-DEPENDENT dephospho-CoA kinase|Methanosphaerula palustris (strain ATCC

Query: 1 VPSISCIDGY 10
+P+I+ IDGY
Sbjct: 52 LPAIAIIDGY 61


>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 1 VPSISCIDGY 10
VP + C+DG+
Sbjct: 168 VPGMVCMDGF 177


>sp|DPCKG_METLZ|GTP-DEPENDENT dephospho-CoA kinase|Methanocorpusculum labreanum (strain ATCC

Query: 1 VPSISCIDGY 10
+PSI IDG+
Sbjct: 52 IPSIGVIDGF 61


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 5 SCIDGY 10
+C+DGY
Sbjct: 131 TCVDGY 136


>sp|HPCD_METS5|3-HYDROXYPROPIONYL-COENZYME A dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PSISCIDGY 10
P+I+ I+GY
Sbjct: 98 PTIAMINGY 106


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 VPSISCID 8
VP I CID
Sbjct: 284 VPKIYCID 291


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PSISCID 8
P I CID
Sbjct: 652 PEIKCID 658


>sp|MFND_METFA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus fervens (strain DSM 4213

Query: 1 VPSISCIDG 9
+ ++ CIDG
Sbjct: 220 IKAVKCIDG 228


>sp|DPCKG_HALLT|GTP-DEPENDENT dephospho-CoA kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VPSISCIDG 9
VP ++ IDG
Sbjct: 61 VPDVALIDG 69


>sp|IF1A_THEVO|TRANSLATION initiation factor 1A|Thermoplasma volcanium (strain ATCC 51530

Query: 3 SISCIDGY 10
S+ C DGY
Sbjct: 54 SVMCEDGY 61


>sp|IF1A_THEAC|TRANSLATION initiation factor 1A|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SISCIDGY 10
S+ C DGY
Sbjct: 50 SVMCEDGY 57


>sp|SFSA_ARCFU|SUGAR fermentation stimulation protein homolog|Archaeoglobus fulgidus

Query: 1 VPSISCIDG 9
+P IS +DG
Sbjct: 91 IPKISWLDG 99


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PSISCIDG 9
P+I C DG
Sbjct: 92 PAIGCDDG 99


>sp|DPCKG_NITMS|GTP-DEPENDENT dephospho-CoA kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VPSISCIDG 9
+PS+ +DG
Sbjct: 46 IPSLQIVDG 54


>sp|MCH_METPE|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PSISCI 7
PSISC+
Sbjct: 85 PSISCL 90




12|SequenceR|65|56|GQGKGVPSIS

>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 2 QGKGVPSI 9
+GKGVPS+
Sbjct: 144 EGKGVPSL 151


>sp|MTRC_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanothermobacter marburgensis

Query: 1 GQGKGVPSI 9
G G GVPSI
Sbjct: 66 GLGTGVPSI 74


>sp|MTRC_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanothermobacter

Query: 1 GQGKGVPSI 9
G G GVPSI
Sbjct: 66 GLGTGVPSI 74


>sp|MTRC_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanocaldococcus jannaschii

Query: 1 GQGKGVPSI 9
G G GVPSI
Sbjct: 68 GLGTGVPSI 76


>sp|MTRC_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanosarcina acetivorans (strain

Query: 1 GQGKGVPSI 9
G G GVPSI
Sbjct: 67 GLGTGVPSI 75


>sp|MTRC_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanosarcina barkeri (strain

Query: 1 GQGKGVPSI 9
G G GVPSI
Sbjct: 67 GLGTGVPSI 75


>sp|FPOO_METMA|F(420)H(2) dehydrogenase subunit O|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GKGVPSI 9
GKG+P++
Sbjct: 8 GKGIPTV 14


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GQGKGVPS 8
G G GVPS
Sbjct: 305 GAGYGVPS 312


>sp|ILVC_METLZ|KETOL-ACID reductoisomerase (NADP(+))|Methanocorpusculum labreanum (strain

Query: 2 QGKGVPSI 9
+GKGVP++
Sbjct: 142 EGKGVPAL 149


>sp|Y1344_THEON|UPF0200 protein TON_1344|Thermococcus onnurineus (strain NA1)

Query: 2 QGKGVPSIS 10
+ +GVPS+S
Sbjct: 21 EKRGVPSVS 29


>sp|ILVC_METB6|KETOL-ACID reductoisomerase (NADP(+))|Methanoregula boonei (strain DSM 21154

Query: 2 QGKGVPSI 9
+GKGVP++
Sbjct: 142 EGKGVPAL 149


>sp|MTRC_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanopyrus kandleri (strain AV19

Query: 1 GQGKGVPSI 9
G G GVPSI
Sbjct: 75 GLGTGVPSI 83


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 2 QGKGVPSI 9
+GKGVP++
Sbjct: 142 EGKGVPAL 149


>sp|MTRC_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain

Query: 1 GQGKGVPSI 9
G G GVPSI
Sbjct: 66 GLGTGVPSI 74


>sp|GLKA_THEKO|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus kodakarensis (strain ATCC

Query: 2 QGKGVPS 8
+GKG+P+
Sbjct: 256 EGKGIPA 262


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain ATCC

Query: 2 QGKGVPSI 9
+GKGVP++
Sbjct: 142 EGKGVPAL 149


>sp|ILVC_METHJ|KETOL-ACID reductoisomerase (NADP(+))|Methanospirillum hungatei JF-1 (strain

Query: 2 QGKGVPSI 9
+GKGVP++
Sbjct: 142 EGKGVPAL 149


>sp|MTRC_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus vannielii (strain

Query: 1 GQGKGVPSI 9
G G GVPSI
Sbjct: 66 GLGTGVPSI 74


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 2 QGKGVPSIS 10
QGK V SIS
Sbjct: 145 QGKDVESIS 153


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 2 QGKGVPSIS 10
QGK V SIS
Sbjct: 145 QGKDVESIS 153


>sp|MTRD_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 2 QGKGVPSIS 10
+G G+P++S
Sbjct: 131 EGHGIPTVS 139


>sp|MTRC_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain

Query: 1 GQGKGVPSI 9
G G GVPSI
Sbjct: 66 GLGTGVPSI 74




13|SequenceR|70|61|LNFETGQGKG

>sp|RL11_NATPD|LARGE ribosomal subunit protein uL11|Natronomonas pharaonis (strain

Query: 1 LNFETGQGK 9
L+FETG G+
Sbjct: 79 LDFETGSGE 87


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNFETGQG 8
LNF+ G+G
Sbjct: 91 LNFDEGEG 98


>sp|PCNA_METBU|DNA polymerase sliding clamp|Methanococcoides burtonii (strain DSM 6242

Query: 1 LNFETGQGKG 10
+NF GKG
Sbjct: 223 INFSIANGKG 232


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LNFETGQGKG 10
LNFE G G
Sbjct: 694 LNFENGTSLG 703


>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FETGQGKG 10
F+TG G G
Sbjct: 72 FQTGSGTG 79


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LNFETGQG 8
LNF TG+G
Sbjct: 198 LNFITGRG 205




14|SequenceR|75|66|GKRFTLNFET

>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GKRFTLNFE 9
G++FT N+E
Sbjct: 234 GQKFTANYE 242


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GKRFTLNFE 9
GK++T N+E
Sbjct: 234 GKKYTANYE 242


>sp|ARGDC_PYRNV|ARGININE decarboxylase proenzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KRFTLNF 8
KRFT+N+
Sbjct: 114 KRFTVNY 120


>sp|ARGDC_PYRIL|ARGININE decarboxylase proenzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KRFTLNF 8
KRFT+N+
Sbjct: 114 KRFTVNY 120


>sp|ARGDC_PYRCJ|ARGININE decarboxylase proenzyme|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KRFTLNF 8
KRFT+N+
Sbjct: 114 KRFTVNY 120


>sp|ARGDC_PYRAR|ARGININE decarboxylase proenzyme|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KRFTLNF 8
KRFT+N+
Sbjct: 121 KRFTVNY 127


>sp|ARGDC_PYRAE|ARGININE decarboxylase proenzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KRFTLNF 8
KRFT+N+
Sbjct: 114 KRFTVNY 120


>sp|TRM56_METS3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanobrevibacter smithii

Query: 1 GKRFTLNFE 9
GK F L FE
Sbjct: 150 GKEFDLEFE 158


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 GKRFTLNFET 10
G ++TL F+T
Sbjct: 202 GAKYTLAFDT 211


>sp|TYW31_PYRAB|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 RFTLNFE 9
RFT NFE
Sbjct: 2 RFTENFE 8


>sp|Y1572_ARCFU|UNCHARACTERIZED protein AF_1572|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKRFTLNF 8
GKRF NF
Sbjct: 97 GKRFYTNF 104


>sp|TYW31_PYRHO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 RFTLNFE 9
RFT NFE
Sbjct: 2 RFTENFE 8


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FTLNFE 9
FT+NFE
Sbjct: 403 FTINFE 408




15|SequenceR|80|71|SKKGSGKRFT

>sp|TTRB_ARCFU|TETRATHIONATE reductase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SKKGSGKR 8
S+KGSGKR
Sbjct: 17 SQKGSGKR 24


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 1 SKKGSGKRFT 10
SKKG G++FT
Sbjct: 112 SKKGKGRKFT 121


>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SKKGSGKRFT 10
S+K SGK+ T
Sbjct: 34 SRKDSGKKLT 43


>sp|KTHY_METHJ|PROBABLE thymidylate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KKGSGKRF 9
K+GSG+ F
Sbjct: 141 KRGSGEHF 148


>sp|RL1_AERPE|LARGE ribosomal subunit protein uL1|Aeropyrum pernix (strain ATCC

Query: 2 KKGSGKRF 9
K G GKRF
Sbjct: 19 KLGRGKRF 26


>sp|RL3_PYRAB|LARGE ribosomal subunit protein uL3|Pyrococcus abyssi (strain GE5 /

Query: 1 SKKGSGKRFT 10
SKK G++FT
Sbjct: 111 SKKAKGRKFT 120




16|SequenceR|85|76|FKLTESKKGS

>sp|REG4_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF0864|Pyrococcus furiosus

Query: 1 FKLTESKKG 9
F +TE KKG
Sbjct: 144 FPITEIKKG 152




17|SequenceR|90|81|RHETSFKLTE

>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 RHETSFKLTE 10
+ +TSFKL+E
Sbjct: 17 KSDTSFKLSE 26


>sp|LYSZ_CALMQ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Caldivirga

Query: 3 ETSFKLTE 10
ET+ KLTE
Sbjct: 223 ETALKLTE 230


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 ETSFKLTE 10
ET F+LTE
Sbjct: 310 ETDFRLTE 317


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ETSFKLTE 10
ET F+LTE
Sbjct: 310 ETDFRLTE 317




18|SequenceR|95|86|TLLETRHETS

>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 1 TLLETRHET 9
TL+E R+ET
Sbjct: 780 TLIEVRNET 788


>sp|UPPP_SACI7|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain Y.G.57.14 /

Query: 1 TLLETRHETS 10
TLL TRH S
Sbjct: 196 TLLFTRHHIS 205


>sp|UPPP_SACI1|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain Y.N.15.51 /

Query: 1 TLLETRHETS 10
TLL TRH S
Sbjct: 196 TLLFTRHHIS 205


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LLETRH 7
LLETRH
Sbjct: 54 LLETRH 59




19|SequenceR|100|91|FRLAETLLET

>sp|SIHH_METMP|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LAETLLE 9
LAETLLE
Sbjct: 58 LAETLLE 64


>sp|PYRE_METKA|OROTATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 RLAETLLE 9
RLAE LLE
Sbjct: 7 RLAEMLLE 14


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FRLAETL 7
+RLAETL
Sbjct: 454 YRLAETL 460


>sp|RS17E_PYRAR|SMALL ribosomal subunit protein eS17|Pyrobaculum arsenaticum (strain

Query: 3 LAETLLET 10
LAE LLET
Sbjct: 12 LAEKLLET 19


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FRLAETLLET 10
F+L+ET +E+
Sbjct: 254 FKLSETAIES 263




20|SequenceR|105|96|SFDTRFRLAE

>sp|Y3004_HALS3|UPF0179 protein OE_3004R|Halobacterium salinarum (strain ATCC 29341

Query: 1 SFDTRFRLAE 10
SFDT +++AE
Sbjct: 113 SFDTEYQIAE 122


>sp|Y1401_HALSA|UPF0179 protein VNG_1401C|Halobacterium salinarum (strain ATCC 700922

Query: 1 SFDTRFRLAE 10
SFDT +++AE
Sbjct: 113 SFDTEYQIAE 122


>sp|PGP_METTP|PHOSPHOGLYCOLATE phosphatase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 FDTRFRLAE 10
FD+R+RL +
Sbjct: 97 FDSRYRLTD 105




21|SequenceR|110|101|TIKGESFDTR

>sp|THI4_METMJ|THIAMINE thiazole synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TIKGESF 7
T+KGESF
Sbjct: 187 TVKGESF 193


>sp|MCRW_METTH|METHYL-COENZYME M reductase II operon|Methanothermobacter thermautotrophicus

Query: 1 TIKGESFDTR 10
T++GE F+ R
Sbjct: 69 TVRGEEFELR 78


>sp|PCNA_METB6|DNA polymerase sliding clamp|Methanoregula boonei (strain DSM 21154

Query: 1 TIKGESFDT 9
T+K E+FDT
Sbjct: 50 TLKKEAFDT 58


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 1 TIKGESFDTR 10
T+KG++FD +
Sbjct: 331 TLKGDTFDHK 340


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 1 TIKGESFDTR 10
T+KG++FD +
Sbjct: 325 TLKGDTFDHK 334


>sp|MTAP_THEAC|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TIKGESFDTR 10
TI+G F TR
Sbjct: 160 TIEGPRFSTR 169


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 TIKGESFD 8
TIKG FD
Sbjct: 104 TIKGHGFD 111


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 1 TIKGESFD 8
T+KG++FD
Sbjct: 325 TLKGDTFD 332


>sp|Y1688_HALSA|UNCHARACTERIZED protein VNG_1688C|Halobacterium salinarum (strain ATCC 700922

Query: 2 IKGESFDTR 10
++ E+FDTR
Sbjct: 70 LRKEAFDTR 78


>sp|COFD_METLZ|2-PHOSPHO-L-LACTATE transferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 IKGESFDT 9
I+G+SF+T
Sbjct: 67 IRGDSFET 74


>sp|AROK_THEGJ|SHIKIMATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TIKGESF 7
T++GESF
Sbjct: 47 TVRGESF 53




22|SequenceR|115|106|NYRRGTIKGE

>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 YRRGTIKGE 10
Y++GTI G+
Sbjct: 138 YKKGTIDGD 146


>sp|RL39_THEAC|LARGE ribosomal subunit protein eL39|Thermoplasma acidophilum (strain

Query: 1 NYRRGTIK 8
N+RRG++K
Sbjct: 43 NWRRGSLK 50


>sp|DPCKG_STAMF|GTP-DEPENDENT dephospho-CoA kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 NYRRGTIKGE 10
NYR +KGE
Sbjct: 98 NYRTIIVKGE 107


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RRGTIKG 9
++GTIKG
Sbjct: 149 KKGTIKG 155


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 RRGTIKG 9
++GTIKG
Sbjct: 149 KKGTIKG 155


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 3 RRGTIKG 9
++GTIKG
Sbjct: 149 KKGTIKG 155


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 2 YRRGTIKGE 10
Y++GT+ G+
Sbjct: 135 YKKGTLDGD 143


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 2 YRRGTIKGE 10
Y++GT+ G+
Sbjct: 135 YKKGTLDGD 143


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 2 YRRGTIKGE 10
Y++GT+ G+
Sbjct: 135 YKKGTLDGD 143


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 YRRGTIKGE 10
Y++GT+ G+
Sbjct: 135 YKKGTLDGD 143


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 YRRGTIKGE 10
Y++GT+ G+
Sbjct: 135 YKKGTLDGD 143


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NYRRGTIKGE 10
+Y++G I+G+
Sbjct: 136 SYKKGKIEGD 145


>sp|RL39_THEVO|LARGE ribosomal subunit protein eL39|Thermoplasma volcanium (strain

Query: 1 NYRRGTIK 8
N+RRG +K
Sbjct: 43 NWRRGNLK 50




23|SequenceR|120|111|HHKYCNYRRG

>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 2 HKYCNYRRG 10
H++CNY G
Sbjct: 95 HEFCNYVEG 103


>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YCNYRRG 10
YCNY +G
Sbjct: 112 YCNYTKG 118


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 HKYCNYRRG 10
H+YC RG
Sbjct: 221 HQYCKIHRG 229


>sp|SALAC_HALSA|SALACTIN salinarum (strain ATCC 700922

Query: 5 CNYRRG 10
C YRRG
Sbjct: 186 CAYRRG 191


>sp|RIFK_HALSA|RIBOFLAVIN kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 HKYCNYRR 9
H+Y +YRR
Sbjct: 85 HEYEDYRR 92


>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 YCNYRR 9
YC++RR
Sbjct: 37 YCSFRR 42


>sp|Y358_METJA|UNCHARACTERIZED protein MJ0358|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YCNYRRG 10
YC +R+G
Sbjct: 89 YCKFRKG 95


>sp|PDAD1_ARCFU|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HHKYCN 6
+H YCN
Sbjct: 102 YHGYCN 107


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 3 KYCNYRR 9
KY N+RR
Sbjct: 349 KYSNFRR 355


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KYCNYRR 9
KY N+RR
Sbjct: 351 KYSNFRR 357




24|SequenceR|125|116|RSDSWHHKYC

>sp|MPTB_METJA|DIHYDRONEOPTERIN 2',3'-cyclic phosphate phosphodiesterase|Methanocaldococcus

Query: 2 SDSWHHKY 9
S +WHH+Y
Sbjct: 47 SINWHHRY 54


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SDSWHHKY 9
+D W HKY
Sbjct: 20 NDKWRHKY 27


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DSWHHKY 9
++WH KY
Sbjct: 365 EAWHEKY 371


>sp|NNR_METKA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanopyrus kandleri (strain

Query: 1 RSDSWHHK 8
R D W HK
Sbjct: 227 RRDPWSHK 234


>sp|Y748_THEPD|PROTEIN Tpen_0748|Thermofilum pendens (strain DSM 2475

Query: 1 RSDSWHH 7
R D+W H
Sbjct: 177 RDDAWRH 183


>sp|PELO_METMA|PROTEIN pelota homolog|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DSWHHKY 9
D WH KY
Sbjct: 24 DLWHLKY 30


>sp|PELO_METBU|PROTEIN pelota homolog|Methanococcoides burtonii (strain DSM 6242

Query: 3 DSWHHKY 9
D WH KY
Sbjct: 25 DLWHLKY 31


>sp|PELO_METBF|PROTEIN pelota homolog|Methanosarcina barkeri (strain Fusaro /

Query: 3 DSWHHKY 9
D WH KY
Sbjct: 24 DLWHLKY 30


>sp|PELO_METAR|PROTEIN pelota homolog|Methanocella arvoryzae (strain DSM 22066

Query: 3 DSWHHKY 9
D WH KY
Sbjct: 24 DLWHLKY 30


>sp|PELO_METAC|PROTEIN pelota homolog|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DSWHHKY 9
D WH KY
Sbjct: 24 DLWHLKY 30


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 RSDSW 5
RSDSW
Sbjct: 409 RSDSW 413


>sp|RL34_PYRHO|LARGE ribosomal subunit protein eL34|Pyrococcus horikoshii (strain ATCC

Query: 1 RSDSWHHKY 9
RS SW KY
Sbjct: 6 RSRSWRRKY 14


>sp|PHS_HALMA|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Haloarcula marismortui

Query: 3 DSWHH 7
D+WHH
Sbjct: 50 DAWHH 54


>sp|RL34_THEON|LARGE ribosomal subunit protein eL34|Thermococcus onnurineus (strain

Query: 1 RSDSWHHKY 9
RS SW KY
Sbjct: 6 RSRSWRRKY 14


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 DSWHHK 8
+ WHH+
Sbjct: 204 EDWHHR 209


>sp|RL34_THEKO|LARGE ribosomal subunit protein eL34|Thermococcus kodakarensis (strain

Query: 1 RSDSWHHKY 9
RS SW KY
Sbjct: 6 RSRSWRRKY 14


>sp|RL34_PYRFU|LARGE ribosomal subunit protein eL34|Pyrococcus furiosus (strain ATCC

Query: 1 RSDSWHHKY 9
RS SW KY
Sbjct: 6 RSRSWRRKY 14


>sp|RL34_PYRAB|LARGE ribosomal subunit protein eL34|Pyrococcus abyssi (strain GE5 /

Query: 1 RSDSWHHKY 9
RS SW KY
Sbjct: 6 RSRSWRRKY 14


>sp|RL34_THESM|LARGE ribosomal subunit protein eL34|Thermococcus sibiricus (strain DSM

Query: 1 RSDSWHHKY 9
RS SW KY
Sbjct: 6 RSRSWRRKY 14


>sp|RL34_THEGJ|LARGE ribosomal subunit protein eL34|Thermococcus gammatolerans (strain

Query: 1 RSDSWHHKY 9
RS SW KY
Sbjct: 6 RSRSWRRKY 14


>sp|CAS4_SACS2|CRISPR-ASSOCIATED exonuclease Cas4|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 SWHHKYC 10
+W KYC
Sbjct: 185 NWECKYC 191


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WHHKY 9
WHH Y
Sbjct: 550 WHHIY 554




25|SequenceR|130|121|LIVPKRSDSW

>sp|PELO_IGNH4|PROTEIN pelota homolog|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LIVPKRSDSW 10
+IVPK +++W
Sbjct: 318 IIVPKGTEAW 327


>sp|PFP_THETK|PYROPHOSPHATE--FRUCTOSE 6-phosphate 1-phosphotransferase|Thermoproteus tenax (strain ATCC

Query: 1 LIVPKRSDSW 10
+++P+R SW
Sbjct: 188 VLIPERPASW 197


>sp|Y51B_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514.2|Methanocaldococcus jannaschii

Query: 2 IVPKRSD 8
I+PKR D
Sbjct: 266 IIPKRKD 272


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 1 LIVPKRSDSW 10
L+VP RS+ +
Sbjct: 253 LVVPSRSEGF 262


>sp|Y334_METJA|UNCHARACTERIZED protein MJ0334|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVPKRSD 8
+VPK+SD
Sbjct: 19 LVPKKSD 25


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 IVPKRSDSW 10
I P R+D W
Sbjct: 405 IDPSRNDHW 413


>sp|Y04A_METJA|UNCHARACTERIZED protein MJ0047.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VPKRSD 8
+PKRSD
Sbjct: 83 IPKRSD 88




26|SequenceR|135|126|GPTVELIVPK

>sp|COFC_HALWD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GPTVELIVP 9
G TVEL++P
Sbjct: 44 GHTVELLIP 52


>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 1 GPTVELIVP 9
GP +EL P
Sbjct: 323 GPEIELAAP 331


>sp|HLY_NATA1|HALOLYSIN asiatica (strain ATCC 700177

Query: 1 GPTVELIVP 9
GP +EL P
Sbjct: 323 GPEIELAAP 331


>sp|RAD50_NANEQ|DNA double-strand break repair Rad50|Nanoarchaeum equitans (strain

Query: 2 PTVELIVPK 10
P +EL +PK
Sbjct: 483 PIIELEIPK 491


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GP-TVELIVPK 10
GP T+EL VP+
Sbjct: 452 GPGTIELFVPR 462


>sp|RS3A_IGNH4|SMALL ribosomal subunit protein eS1|Ignicoccus hospitalis (strain KIN4/I

Query: 1 GPTVELIVPK 10
GP +IVPK
Sbjct: 200 GPIKAVIVPK 209


>sp|Y3024_HALLT|UNCHARACTERIZED protein Hlac_3024|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PTVELIVP 9
PTVE+ +P
Sbjct: 199 PTVEMEIP 206




27|SequenceR|140|131|IQDFGGPTVE

>sp|Y215_METJA|UNCHARACTERIZED protein MJ0215|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IQDFGGPTVE 10
I+D+G PTVE
Sbjct: 72 IEDYGIPTVE 81


>sp|Y3520_METJA|UNCHARACTERIZED protein MJECL20|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IQDFGGPTVE 10
I+D+G PTVE
Sbjct: 62 IEDYGIPTVE 71


>sp|FLPA_HALMA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloarcula marismortui (strain

Query: 1 IQDFGGPT 8
+ DFGGPT
Sbjct: 76 VADFGGPT 83


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 1 IQDFGGPTVE 10
I D GGPT +
Sbjct: 341 ISDIGGPTAD 350


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IQDFGGPT 8
IQD G PT
Sbjct: 341 IQDIGAPT 348


>sp|Y2291_ARCFU|UNCHARACTERIZED protein AF_2291|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DFGGPTV 9
DFG PTV
Sbjct: 251 DFGTPTV 257


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IQDFGGP 7
+ DFGGP
Sbjct: 194 LSDFGGP 200


>sp|Y1914_METTH|UPF0425 pyridoxal phosphate-dependent protein MTH_1914|Methanothermobacter

Query: 1 IQDFGGPTVE 10
++DF GP VE
Sbjct: 269 LRDFRGPEVE 278


>sp|RIBA_THEVO|GTP cyclohydrolase-2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IQDFGGPTVE 10
+QD G TVE
Sbjct: 105 LQDMGADTVE 114


>sp|FLPA_HALWD|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloquadratum walsbyi (strain

Query: 1 IQDFGGPT 8
+ DF GPT
Sbjct: 81 VADFAGPT 88


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IQDFGGPTVE 10
+ DFG PT E
Sbjct: 182 VPDFGTPTGE 191


>sp|DPHB_METAR|DIPHTHINE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 DFGGP 7
DFGGP
Sbjct: 226 DFGGP 230


>sp|Y718_METJA|UNCHARACTERIZED transporter MJ0718|Methanocaldococcus jannaschii (strain ATCC

Query: 4 FGGPT 8
FGGPT
Sbjct: 38 FGGPT 42


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 1 IQDFGGPTVE 10
+ D GGP E
Sbjct: 101 VTDLGGPAAE 110


>sp|FLPA_HALSA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halobacterium salinarum (strain

Query: 1 IQDFGGPT 8
+ DF GPT
Sbjct: 77 VADFAGPT 84


>sp|FLPA_HALS3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halobacterium salinarum (strain

Query: 1 IQDFGGPT 8
+ DF GPT
Sbjct: 77 VADFAGPT 84


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 FGGPTVE 10
FGGP VE
Sbjct: 181 FGGPGVE 187


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 FGGPTVE 10
FGGP VE
Sbjct: 178 FGGPGVE 184


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 FGGPTVE 10
FGGP VE
Sbjct: 179 FGGPGVE 185


>sp|Y1505_AERPE|UPF0273 protein APE_1505.1|Aeropyrum pernix (strain ATCC 700893

Query: 4 FGGPTVE 10
FGGP VE
Sbjct: 179 FGGPGVE 185


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 4 FGGPTVE 10
FGGP VE
Sbjct: 179 FGGPGVE 185


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 4 FGGPTVE 10
FGGP VE
Sbjct: 179 FGGPGVE 185


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FGGPTVE 10
FGGP VE
Sbjct: 179 FGGPGVE 185


>sp|HEM1_HALMA|GLUTAMYL-TRNA reductase|Haloarcula marismortui (strain ATCC 43049

Query: 3 DFGGP 7
DFGGP
Sbjct: 408 DFGGP 412


>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 FGGPTVE 10
FGGP VE
Sbjct: 180 FGGPGVE 186


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 FGGPTVE 10
FGGP VE
Sbjct: 179 FGGPGVE 185


>sp|DPHB_METPE|DIPHTHINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 DFGGP 7
DFGGP
Sbjct: 221 DFGGP 225


>sp|PFP_THETK|PYROPHOSPHATE--FRUCTOSE 6-phosphate 1-phosphotransferase|Thermoproteus tenax (strain ATCC

Query: 1 IQDFGGPTVE 10
I+++GGP E
Sbjct: 222 IKEYGGPKDE 231


>sp|FLPA_HALLT|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halorubrum lacusprofundi (strain

Query: 1 IQDFGGPT 8
+ DF GPT
Sbjct: 79 VADFAGPT 86


>sp|HIS1_METMP|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 IQDFGGPTV 9
I GGPTV
Sbjct: 235 IPGMGGPTV 243


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 4 FGGPTVE 10
FGGP VE
Sbjct: 180 FGGPGVE 186


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IQDFGGPTV 9
I DFG P V
Sbjct: 134 IDDFGRPVV 142


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 3 DFGGPTVE 10
+FGG TV+
Sbjct: 320 EFGGTTVQ 327


>sp|HIS1_METM7|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 IQDFGGPTV 9
I GGPTV
Sbjct: 235 IPGMGGPTV 243


>sp|HIS1_METM6|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 IQDFGGPTV 9
I GGPTV
Sbjct: 235 IPGMGGPTV 243


>sp|IDI2_METAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DFGGPTV 9
DFG PTV
Sbjct: 249 DFGIPTV 255


>sp|HIS1_METM5|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 IQDFGGPTV 9
I GGPTV
Sbjct: 235 IPGMGGPTV 243


>sp|GUAAA_METAR|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocella arvoryzae

Query: 5 GGPTVE 10
GGPT+E
Sbjct: 54 GGPTME 59


>sp|IDI2_METBU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 3 DFGGPTV 9
DFG PTV
Sbjct: 246 DFGIPTV 252


>sp|MTRE_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 4 FGGPT 8
FGGPT
Sbjct: 230 FGGPT 234


>sp|R15PI_HALVD|RIBOSE 1,5-bisphosphate isomerase|Haloferax volcanii (strain ATCC 29605

Query: 1 IQDFGGPTVE 10
+ D G PTV+
Sbjct: 262 LADLGNPTVK 271


>sp|IDI2_METMA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DFGGPTV 9
DFG PTV
Sbjct: 249 DFGIPTV 255


>sp|IDI2_METBF|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DFGGPTV 9
DFG PTV
Sbjct: 249 DFGIPTV 255




28|SequenceR|145|136|NTAPNIQDFG

>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 2 TAPNIQDF 9
T P IQDF
Sbjct: 128 TKPGIQDF 135


>sp|TRPA_SULAC|TRYPTOPHAN synthase alpha chain|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 NIQDFG 10
NI+DFG
Sbjct: 26 NIEDFG 31


>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 NTAPNI 6
NTAPN+
Sbjct: 258 NTAPNL 263


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NTAPNIQDFG 10
+ A NIQD+G
Sbjct: 597 DNALNIQDYG 606


>sp|Y2165_ARCFU|UNCHARACTERIZED protein AF_2165|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NTAPNIQDFG 10
N P++ DFG
Sbjct: 78 NWDPDVDDFG 87


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NTAPNIQDF 9
N AP ++D+
Sbjct: 321 NLAPKVEDY 329




29|SequenceR|150|141|SCLVRNTAPN

>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 RNTAPN 10
RNTAPN
Sbjct: 257 RNTAPN 262


>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CLVRNTAPN 10
C RN PN
Sbjct: 189 CYARNIPPN 197


>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 3 LVRNTAPN 10
+VR++APN
Sbjct: 193 IVRSSAPN 200


>sp|OGT_METVM|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus vulcanius (strain ATCC

Query: 3 LVRNTAP 9
LVRNT P
Sbjct: 19 LVRNTIP 25


>sp|OGT_METJA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LVRNTAP 9
LVRNT P
Sbjct: 19 LVRNTIP 25


>sp|RL10E_THEVO|LARGE ribosomal subunit protein uL16|Thermoplasma volcanium (strain

Query: 1 SCLVRNTA 8
SC VR+TA
Sbjct: 54 SCQVRHTA 61




30|SequenceR|155|146|NRYDYSCLVR

>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 3 YDYSCLV 9
+DY+CLV
Sbjct: 183 FDYNCLV 189


>sp|IPK_THEAC|ISOPENTENYL phosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RYDYSCLVR 10
R+DY+ L+R
Sbjct: 108 RFDYTPLIR 116


>sp|Y384_ARCFU|UPF0252 protein AF_0384|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RYDYSC 7
RYDY C
Sbjct: 34 RYDYEC 39


>sp|PURQ_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YDYSCLV 9
+DY CLV
Sbjct: 55 FDYQCLV 61


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 NRYDYSCLV 9
+R+D CLV
Sbjct: 547 DRFDAGCLV 555


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YDYSCLV 9
YDY C V
Sbjct: 318 YDYPCAV 324


>sp|HMGCS_METS3|HYDROXYMETHYLGLUTARYL-COA synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 YDYSCL 8
YDY+C
Sbjct: 228 YDYACF 233


>sp|APAUH_THEKO|N(1)-AMINOPROPYLAGMATINE ureohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NRYDYSCLVR 10
N Y+++C+ R
Sbjct: 145 NPYNHACVAR 154


>sp|FER5_METJA|UNCHARACTERIZED ferredoxin MJ0251|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RYDYSCLV 9
+Y YSC+V
Sbjct: 114 KYPYSCIV 121




31|SequenceR|160|151|VFGEINRYDY

>sp|RL1_CENSY|LARGE ribosomal subunit protein uL1|Cenarchaeum symbiosum (strain A)

Query: 5 INRYDY 10
INRYD+
Sbjct: 98 INRYDF 103


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 4 EINRYD 9
E+NRYD
Sbjct: 568 ELNRYD 573


>sp|SYFB_METLZ|PHENYLALANINE--TRNA ligase beta subunit|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VFGEIN 6
VFGEIN
Sbjct: 508 VFGEIN 513


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 1 VFGEINRY 8
+ GEINR+
Sbjct: 247 IIGEINRF 254


>sp|Y133_THEAC|PUTATIVE quercetin 2,3-dioxygenase Ta0133|Thermoplasma acidophilum (strain

Query: 1 VFGEINRYDY 10
+FG NR DY
Sbjct: 1 MFGSDNRADY 10


>sp|RS4_META3|SMALL ribosomal subunit protein uS4|Methanococcus aeolicus (strain ATCC

Query: 1 VFGEINRY 8
+FG +NRY
Sbjct: 73 LFGILNRY 80


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VFGEINRY 8
+FG ++RY
Sbjct: 403 IFGRVSRY 410


>sp|G1PDH_THEVO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GEINRYD 9
GEI +YD
Sbjct: 215 GEIRKYD 221


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 3 GEINRYDY 10
GE+N+Y +
Sbjct: 551 GEVNQYSH 558


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FGEINRYDY 10
+G+++ Y+Y
Sbjct: 414 YGDVDAYEY 422




32|SequenceR|165|156|YDSLDVFGEI

>sp|PYRDB_METAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina acetivorans

Query: 1 YDSLDVFGEI 10
YD +D+F EI
Sbjct: 275 YDRVDIFSEI 284


>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter thermautotrophicus

Query: 2 DSLDVFG 8
D+LDVFG
Sbjct: 308 DALDVFG 314


>sp|Y663_METTH|PUTATIVE ammonium transporter MTH_663|Methanothermobacter thermautotrophicus

Query: 2 DSLDVFG 8
D+LDVFG
Sbjct: 316 DALDVFG 322


>sp|IF2A_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 1 YDSLDVFGEI 10
Y+ +D+FG++
Sbjct: 130 YELMDIFGDL 139


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 4 LDVFGEI 10
LD FGEI
Sbjct: 471 LDAFGEI 477


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 2 DSLDVFGEI 10
DS+D F EI
Sbjct: 362 DSVDAFDEI 370


>sp|PYRC_METKA|DIHYDROOROTASE kandleri (strain AV19 /

Query: 1 YDSLDVFGE 9
YD + +FGE
Sbjct: 390 YDGMRMFGE 398


>sp|HEM3_METAR|PROBABLE porphobilinogen deaminase|Methanocella arvoryzae (strain DSM 22066

Query: 2 DSLDVFGEI 10
D +DV GE+
Sbjct: 246 DEIDVIGEV 254


>sp|IF2A_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 YDSLDVFGEI 10
Y+ +D+FG++
Sbjct: 127 YELMDIFGDV 136


>sp|Y762_ARCFU|UNCHARACTERIZED protein AF_0762|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DSLDVFGEI 10
DSL+ FG++
Sbjct: 100 DSLNAFGKV 108


>sp|G1PDH_METVS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus vannielii (strain ATCC

Query: 1 YDSLDVFGE 9
YD +D++ E
Sbjct: 50 YDEIDIYNE 58


>sp|RL30_METBF|LARGE ribosomal subunit protein uL30|Methanosarcina barkeri (strain

Query: 1 YDSLDVFGE 9
YDS+ F E
Sbjct: 89 YDSIQAFAE 97


>sp|RL30_METAC|LARGE ribosomal subunit protein uL30|Methanosarcina acetivorans (strain

Query: 1 YDSLDVFGE 9
YDS+ F E
Sbjct: 89 YDSIQAFAE 97


>sp|PYRDB_METMA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina mazei (strain

Query: 1 YDSLDVFGEI 10
YD + +F EI
Sbjct: 278 YDRVGIFSEI 287


>sp|ENO_SACI6|ENOLASE islandicus (strain M.16.4 /

Query: 2 DSLDVFGEI 10
+S D+FGE+
Sbjct: 289 NSFDMFGEL 297


>sp|ENO_SACI4|ENOLASE islandicus (strain M.14.25 /

Query: 2 DSLDVFGEI 10
+S D+FGE+
Sbjct: 289 NSFDMFGEL 297


>sp|ENO_SACI3|ENOLASE islandicus (strain M.16.27) (Sulfolobus

Query: 2 DSLDVFGEI 10
+S D+FGE+
Sbjct: 289 NSFDMFGEL 297


>sp|ENO_SACI2|ENOLASE islandicus (strain L.S.2.15 /

Query: 2 DSLDVFGEI 10
+S D+FGE+
Sbjct: 289 NSFDMFGEL 297


>sp|ENO_SACI1|ENOLASE islandicus (strain Y.N.15.51 /

Query: 2 DSLDVFGEI 10
+S D+FGE+
Sbjct: 289 NSFDMFGEL 297


>sp|ENO_SACI7|ENOLASE islandicus (strain Y.G.57.14 /

Query: 2 DSLDVFGEI 10
+S D+FGE+
Sbjct: 289 NSFDMFGEL 297


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 SLDVFGEI 10
+D+FGEI
Sbjct: 326 RVDIFGEI 333




33|SequenceR|170|161|CFGGQYDSLD

>sp|SYH_METVS|HISTIDINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 CFGGQYDSL 9
C GG+YD+L
Sbjct: 286 CGGGRYDNL 294


>sp|SYH_METMP|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CFGGQYDSL 9
C GG+YD+L
Sbjct: 286 CGGGRYDNL 294


>sp|SYH_METM7|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 CFGGQYDSL 9
C GG+YD+L
Sbjct: 288 CGGGRYDNL 296


>sp|SYH_METM6|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 CFGGQYDSL 9
C GG+YD+L
Sbjct: 288 CGGGRYDNL 296


>sp|SYH_METM5|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 CFGGQYDSL 9
C GG+YD+L
Sbjct: 288 CGGGRYDNL 296


>sp|SYH_METJA|HISTIDINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CFGGQYDSL 9
C GG+YD+L
Sbjct: 286 CGGGRYDNL 294


>sp|SYH_META3|HISTIDINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CFGGQYDSL 9
C GG+YD+L
Sbjct: 288 CGGGRYDNL 296


>sp|GUAAA_SULTO|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfurisphaera

Query: 2 FGGQYDSL 9
FGGQY+ L
Sbjct: 8 FGGQYNHL 15


>sp|GUAAA_SULAC|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfolobus

Query: 2 FGGQYDSL 9
FGGQY+ L
Sbjct: 8 FGGQYNHL 15


>sp|GUAAA_IGNH4|GMP synthase [glutamine-hydrolyzing] subunit A|Ignicoccus hospitalis

Query: 2 FGGQYDSL 9
FGGQY+ L
Sbjct: 9 FGGQYNHL 16


>sp|SYH_METS5|HISTIDINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 GGQYDSL 9
GG+YDSL
Sbjct: 294 GGRYDSL 300


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 3 GGQYDSLD 10
GG+YD+L+
Sbjct: 569 GGEYDALE 576


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 FGGQYD 7
+GGQYD
Sbjct: 529 YGGQYD 534


>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 2 FGGQYDSL 9
+GGQY+ L
Sbjct: 8 YGGQYNHL 15


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 GGQYDSLD 10
GG YD+L+
Sbjct: 315 GGTYDALE 322


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 3 GGQYDSL 9
GG YDS+
Sbjct: 378 GGDYDSM 384


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 2 FGGQYDSL 9
FGG+ D+L
Sbjct: 388 FGGELDTL 395


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GGQYDSL 9
GG+YD+L
Sbjct: 292 GGRYDNL 298


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GGQYDSL 9
GG+YD+L
Sbjct: 292 GGRYDNL 298


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 GGQYDSL 9
GG+YD+L
Sbjct: 290 GGRYDNL 296


>sp|SYH_NANEQ|HISTIDINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 GGQYDSL 9
GG+YD+L
Sbjct: 269 GGRYDNL 275


>sp|TRPC_METS5|INDOLE-3-GLYCEROL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 FGGQYDSLD 10
FGG Y+ L+
Sbjct: 90 FGGSYEYLE 98


>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GGQYDSL 9
GG+YD+L
Sbjct: 290 GGRYDNL 296


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 2 FGGQYDS 8
+GGQ+D+
Sbjct: 566 YGGQFDA 572


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 1 CFGGQYDSLD 10
C G Y +LD
Sbjct: 602 CHGDNYKTLD 611


>sp|PGK_METKA|PHOSPHOGLYCERATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 4 GQYDSLD 10
G YDS+D
Sbjct: 368 GAYDSID 374


>sp|SYH_THEVO|HISTIDINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GGQYDSL 9
GG+YD+L
Sbjct: 289 GGRYDNL 295


>sp|DIPPS_PYRFU|BIFUNCTIONAL IPC transferase and DIPP|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FGGQYDSL 9
FGG +DS+
Sbjct: 313 FGGFFDSI 320


>sp|SYH_SACSH|HISTIDINE--TRNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 294 GGRYDKL 300


>sp|SYH_SACS2|HISTIDINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 294 GGRYDKL 300


>sp|SYH_SACI7|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 294 GGRYDKL 300


>sp|SYH_SACI6|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 294 GGRYDKL 300


>sp|SYH_SACI4|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 294 GGRYDKL 300


>sp|SYH_SACI3|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 294 GGRYDKL 300


>sp|SYH_SACI2|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 294 GGRYDKL 300


>sp|SYH_SACI1|HISTIDINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 294 GGRYDKL 300


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 293 GGRYDDL 299


>sp|SYH_PYRIL|HISTIDINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 293 GGRYDDL 299


>sp|SYH_PYRCJ|HISTIDINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 293 GGRYDDL 299


>sp|SYH_PYRAR|HISTIDINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 293 GGRYDDL 299


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 293 GGRYDDL 299


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GGQYDSL 9
GG+YD L
Sbjct: 296 GGRYDGL 302


>sp|SYH_HALWD|HISTIDINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GGQYDSL 9
GG+YD+L
Sbjct: 294 GGRYDNL 300




34|SequenceR|175|166|GGYLICFGGQ

>sp|G1PDH_HALLT|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halorubrum lacusprofundi (strain ATCC

Query: 2 GYLICFGG 9
GYLI GG
Sbjct: 86 GYLIALGG 93


>sp|RIBA_ARCFU|GTP cyclohydrolase-2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GYLICF 7
G+LICF
Sbjct: 371 GHLICF 376


>sp|G1PDH_NATPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GGYLICFGG 9
G+L+ FGG
Sbjct: 89 AGFLVGFGG 97


>sp|GUAAB_PICTO|GMP synthase [glutamine-hydrolyzing] subunit B|Picrophilus torridus

Query: 2 GYLICFGGQ 10
G L C GGQ
Sbjct: 22 GILACSGGQ 30


>sp|G1PDH_HALWD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GGYLICFGG 9
GYLI GG
Sbjct: 85 AGYLIGLGG 93


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GYLICFGGQ 10
GYLI GG+
Sbjct: 548 GYLIANGGK 556


>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 1 GGYLICFG 8
GGY + FG
Sbjct: 48 GGYKVSFG 55


>sp|HDG_METAC|HYPOXANTHINE DNA glycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LICFGGQ 10
LICF G+
Sbjct: 109 LICFNGR 115


>sp|Y3936_METAC|UPF0060 membrane protein MA_3936|Methanosarcina acetivorans (strain ATCC

Query: 1 GGYLIC 6
GGYLIC
Sbjct: 21 GGYLIC 26


>sp|Y2332_ARCFU|UNCHARACTERIZED protein AF_2332|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LICFGG 9
+IC+GG
Sbjct: 93 IICYGG 98


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 3 YLICFGG 9
YLI +GG
Sbjct: 298 YLIAYGG 304


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GGYLIC 6
GG+L+C
Sbjct: 40 GGHLVC 45


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GGYLICFGG 9
G Y + FGG
Sbjct: 14 GSYSVVFGG 22




35|SequenceR|180|171|HLRSFGGYLI

>sp|PELO_PICTO|PROTEIN pelota homolog|Picrophilus torridus (strain ATCC 700027

Query: 2 LRSFGGY 8
+RSFGGY
Sbjct: 324 IRSFGGY 330


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 3 RSFGGYLI 10
R FGGYL+
Sbjct: 166 RQFGGYLV 173


>sp|Y1236_METTH|UNCHARACTERIZED protein MTH_1236|Methanothermobacter thermautotrophicus (strain

Query: 1 HLRSFGGYLI 10
H+ S GGY++
Sbjct: 15 HMISLGGYIV 24


>sp|RL34_SACS2|LARGE ribosomal subunit protein eL34|Saccharolobus solfataricus (strain

Query: 3 RSFGGYL 9
R FGGYL
Sbjct: 64 RPFGGYL 70


>sp|RL34_SACI6|LARGE ribosomal subunit protein eL34|Saccharolobus islandicus (strain

Query: 3 RSFGGYL 9
R FGGYL
Sbjct: 64 RPFGGYL 70


>sp|RL34_SACI4|LARGE ribosomal subunit protein eL34|Saccharolobus islandicus (strain

Query: 3 RSFGGYL 9
R FGGYL
Sbjct: 64 RPFGGYL 70


>sp|RL34_SACI3|LARGE ribosomal subunit protein eL34|Saccharolobus islandicus (strain

Query: 3 RSFGGYL 9
R FGGYL
Sbjct: 64 RPFGGYL 70


>sp|RL34_SACI7|LARGE ribosomal subunit protein eL34|Saccharolobus islandicus (strain

Query: 3 RSFGGYL 9
R FGGYL
Sbjct: 64 RPFGGYL 70


>sp|RL34_SACI2|LARGE ribosomal subunit protein eL34|Saccharolobus islandicus (strain

Query: 3 RSFGGYL 9
R FGGYL
Sbjct: 64 RPFGGYL 70


>sp|RL34_SACI1|LARGE ribosomal subunit protein eL34|Saccharolobus islandicus (strain

Query: 3 RSFGGYL 9
R FGGYL
Sbjct: 64 RPFGGYL 70


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 3 RSFGGYL 9
R FGGYL
Sbjct: 166 RQFGGYL 172


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HLRSFGGYL 9
++R F GYL
Sbjct: 175 YIRGFSGYL 183


>sp|RL18_THESM|LARGE ribosomal subunit protein uL18|Thermococcus sibiricus (strain DSM

Query: 3 RSFGGYLI 10
+ FGGYL+
Sbjct: 165 KQFGGYLV 172


>sp|RL18_THEGJ|LARGE ribosomal subunit protein uL18|Thermococcus gammatolerans (strain

Query: 3 RSFGGYLI 10
+ FGGYL+
Sbjct: 166 KQFGGYLV 173


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 3 RSFGGYL 9
R FGGYL
Sbjct: 166 RQFGGYL 172


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 2 LRSFGGY 8
LRSF GY
Sbjct: 309 LRSFKGY 315


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HLRSFGGYL 9
++R F GYL
Sbjct: 175 YVRGFSGYL 183


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HLRSFGGYL 9
++R F GYL
Sbjct: 175 YVRGFSGYL 183


>sp|CCA_PYRFU|CCA-ADDING enzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HLRSFGGYL 9
++R F GYL
Sbjct: 175 YVRGFSGYL 183


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LRSFGGY 8
LRSF GY
Sbjct: 309 LRSFRGY 315


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 LRSFGGYL 9
+++FGGY+
Sbjct: 359 MQAFGGYV 366


>sp|GLYA_ARCFU|SERINE hydroxymethyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HLRSFGGYLI 10
HL + GY++
Sbjct: 272 HLNTLAGYVV 281


>sp|COFE_METTH|COENZYME F420:L-glutamate ligase|Methanothermobacter thermautotrophicus

Query: 1 HLRSFGG 7
HLRS GG
Sbjct: 231 HLRSDGG 237




36|SequenceR|185|176|ESAFLHLRSF

>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 1 ESAFLHLR 8
E AFLH R
Sbjct: 27 ERAFLHYR 34




37|SequenceR|190|181|IEERQESAFL

>sp|ARGC_METLZ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 EERQESAFL 10
E RQE+AFL
Sbjct: 203 EMRQEAAFL 211


>sp|TYW2_METJA|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 1 IEERQESAFL 10
IEER+ AF+
Sbjct: 84 IEERKRMAFI 93




38|SequenceR|195|186|IASKIIEERQ

>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 4 KIIEERQ 10
KI+EERQ
Sbjct: 198 KILEERQ 204


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IASKIIEERQ 10
IA K+IEER+
Sbjct: 7 IAEKLIEERK 16


>sp|Y1024_METJA|UNCHARACTERIZED protein MJ1024|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IASKIIEERQ 10
I S IIEE+Q
Sbjct: 205 IVSSIIEEKQ 214


>sp|PFDA_METS5|PREFOLDIN subunit alpha|Metallosphaera sedula (strain ATCC 51363

Query: 2 ASKIIEERQ 10
ASKI++ER+
Sbjct: 99 ASKILDERE 107


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 ASKIIEER 9
A KI+EER
Sbjct: 47 ADKIVEER 54


>sp|Y1276_AERPE|UNCHARACTERIZED protein APE_1276|Aeropyrum pernix (strain ATCC 700893

Query: 4 KIIEERQ 10
KI+EERQ
Sbjct: 151 KILEERQ 157


>sp|TRM56_META3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus aeolicus

Query: 1 IASKIIEERQ 10
I KIIE+RQ
Sbjct: 93 IMKKIIEKRQ 102




39|SequenceR|200|191|NGAHDIASKI

>sp|RL1_STAMF|LARGE ribosomal subunit protein uL1|Staphylothermus marinus (strain ATCC

Query: 1 NGAHDIA 7
NGAH+IA
Sbjct: 193 NGAHNIA 199


>sp|GGGPS_SULAC|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 HDIASKI 10
HDIASK+
Sbjct: 38 HDIASKL 44


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GAHDIAS 8
G HD+AS
Sbjct: 400 GGHDVAS 406




40|SequenceR|205|196|SIGIYNGAHD

>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 141 GAYHGAHD 148


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 143 GCYHGAHD 150


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 138 GCYHGAHD 145


>sp|GSA_NITMS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 136 GCYHGAHD 143


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 140 GCYHGAHD 147


>sp|REG3_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH0140|Pyrococcus horikoshii

Query: 2 IGIYNGAHD 10
+GI GAHD
Sbjct: 103 LGIVTGAHD 111


>sp|REG3_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB01370|Pyrococcus abyssi

Query: 2 IGIYNGAHD 10
+GI GAHD
Sbjct: 103 LGIVTGAHD 111


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 136 GAYHGAHD 143


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 136 GNYHGAHD 143


>sp|REG3_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF1231|Pyrococcus furiosus

Query: 2 IGIYNGAHD 10
+GI GAHD
Sbjct: 93 LGIATGAHD 101


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 146 GAYHGAHD 153


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 136 GSYHGAHD 143


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 SIGIYNGAH 9
++ IY+GAH
Sbjct: 354 TVAIYSGAH 362


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 SIGIYNGAH 9
++ IY+GAH
Sbjct: 354 TVAIYSGAH 362


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IGIYNGAHD 10
IG+Y+ AH+
Sbjct: 469 IGVYHSAHN 477


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 137 GNYHGAHD 144


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 136 GNYHGAHD 143


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 136 GNYHGAHD 143


>sp|GSA_AERPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GIYNGAHD 10
G Y+G+HD
Sbjct: 141 GCYHGSHD 148


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IGIYNGAHD 10
IG+Y+ AH+
Sbjct: 568 IGVYHEAHN 576


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 2 IGIYNGAHD 10
IG+Y+ AH+
Sbjct: 515 IGVYHEAHN 523


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 139 GAYHGAHD 146


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGIYNG 7
IG+YNG
Sbjct: 200 IGLYNG 205


>sp|RS19_METST|SMALL ribosomal subunit protein uS19|Methanosphaera stadtmanae (strain

Query: 1 SIGIYNG 7
+ GIYNG
Sbjct: 84 TFGIYNG 90


>sp|RS19_METS3|SMALL ribosomal subunit protein uS19|Methanobrevibacter smithii (strain

Query: 1 SIGIYNG 7
+ GIYNG
Sbjct: 84 TFGIYNG 90


>sp|RS19_METMP|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 1 SIGIYNG 7
+ GIYNG
Sbjct: 109 TFGIYNG 115


>sp|RS19_METM7|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C7

Query: 1 SIGIYNG 7
+ GIYNG
Sbjct: 109 TFGIYNG 115


>sp|RS19_METM6|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C6

Query: 1 SIGIYNG 7
+ GIYNG
Sbjct: 109 TFGIYNG 115


>sp|RS19_METM5|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C5

Query: 1 SIGIYNG 7
+ GIYNG
Sbjct: 109 TFGIYNG 115


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 IGIYNGAHD 10
IG+ +GAH+
Sbjct: 564 IGVCHGAHN 572


>sp|PANE_HALSA|2-DEHYDROPANTOATE 2-reductase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SIGIYNGAHD 10
+IG Y GA+D
Sbjct: 146 TIGRYRGAND 155


>sp|IF6_CENSY|TRANSLATION initiation factor 6|Cenarchaeum symbiosum (strain A)

Query: 1 SIGIYNGAHD 10
+IGIY A+D
Sbjct: 13 NIGIYTSAND 22


>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 145 GNYHGAHD 152


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 145 GNYHGAHD 152


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 145 GNYHGAHD 152


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 145 GNYHGAHD 152


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 145 GNYHGAHD 152


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GIYNGAHD 10
G Y+GAHD
Sbjct: 145 GNYHGAHD 152


>sp|GSA1_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 1|Cenarchaeum symbiosum (strain A)

Query: 3 GIYNGAH 9
G Y+GAH
Sbjct: 136 GCYHGAH 142


>sp|PGMI_THEVO|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma volcanium

Query: 4 IYNGAH 9
IYNG H
Sbjct: 168 IYNGEH 173


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 4 IYNGAH 9
IYNG H
Sbjct: 333 IYNGEH 338


>sp|PURO_METAR|IMP cyclohydrolase|Methanocella arvoryzae (strain DSM 22066

Query: 2 IGIYNG 7
+G+YNG
Sbjct: 194 LGVYNG 199




41|SequenceR|210|201|KRIRLSIGIY

>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KRIRLSIGI 9
KRI L IGI
Sbjct: 280 KRILLDIGI 288


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KRIRLSIGI 9
KRI L IGI
Sbjct: 278 KRILLDIGI 286




42|SequenceR|215|206|FELPEKRIRL

>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 1 FELPEKRIRL 10
FE+PE+ +R+
Sbjct: 334 FEIPEQIVRM 343


>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 1 FELPEKRIRL 10
FE+PE+ +R+
Sbjct: 340 FEIPEEIVRM 349


>sp|AMT2_HALMT|AMMONIUM transporter Amt2|Haloferax mediterranei (strain ATCC 33500

Query: 1 FELPEKRIRL 10
FE EKR+R+
Sbjct: 324 FEFVEKRLRI 333


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 FELPEKRIR 9
FE+PEK +R
Sbjct: 257 FEIPEKGVR 265


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 FELPEKRIR 9
FE+PEK +R
Sbjct: 257 FEIPEKGVR 265


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 1 FELPEKRIR 9
FE+PEK +R
Sbjct: 258 FEVPEKGVR 266


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FELPEKRIRL 10
+LP KR+R+
Sbjct: 114 LQLPSKRLRV 123


>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FELPEKRIRL 10
FELPE+ I L
Sbjct: 137 FELPEEGISL 146


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FELPEKRIR 9
FEL EKR+R
Sbjct: 323 FELVEKRVR 331


>sp|ARGJ_METM5|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 FELPEKRIRL 10
FE+ +K+IR+
Sbjct: 162 FEVKDKKIRI 171


>sp|Y531_METTH|UNCHARACTERIZED protein MTH_531|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FELPEKRIRL 10
FELP IR+
Sbjct: 175 FELPHGTIRM 184


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 1 FELPEKRIR 9
FE+P+K +R
Sbjct: 262 FEIPDKGVR 270


>sp|RL13_PYRAE|LARGE ribosomal subunit protein uL13|Pyrobaculum aerophilum (strain ATCC

Query: 1 FELPEKRIRL 10
+E+PE ++RL
Sbjct: 137 YEVPEAKLRL 146


>sp|RNP1_THEON|RIBONUCLEASE P protein component 1|Thermococcus onnurineus (strain NA1)

Query: 1 FELPEKRIRL 10
FE+ +KRIR+
Sbjct: 97 FEVGDKRIRI 106


>sp|DTDA_METVS|D-AMINOACYL-TRNA deacylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FELPEKRI 8
FE+P KR+
Sbjct: 247 FEIPWKRV 254


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 1 FELPEKRIR 9
F+LPE+ I+
Sbjct: 50 FDLPEENIK 58


>sp|IF1A_METLZ|TRANSLATION initiation factor 1A|Methanocorpusculum labreanum (strain ATCC

Query: 2 ELPEKRIR 9
+LP KRIR
Sbjct: 21 KLPNKRIR 28


>sp|RL18A_SACS2|LARGE ribosomal subunit protein eL20|Saccharolobus solfataricus (strain

Query: 2 ELPEKRIR 9
E+P++RIR
Sbjct: 69 EIPDRRIR 76


>sp|RS10_THEKO|SMALL ribosomal subunit protein uS10|Thermococcus kodakarensis (strain

Query: 3 LPEKRIRL 10
LP KRIR+
Sbjct: 40 LPTKRIRI 47


>sp|Y1317_ARCFU|UNCHARACTERIZED protein AF_1317|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ELPEKRIRL 10
ELP KRI++
Sbjct: 303 ELPVKRIKI 311


>sp|RL18A_SACI7|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 2 ELPEKRIR 9
E+P++RIR
Sbjct: 69 EIPDRRIR 76


>sp|RL18A_SACI6|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 2 ELPEKRIR 9
E+P++RIR
Sbjct: 69 EIPDRRIR 76


>sp|RL18A_SACI4|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 2 ELPEKRIR 9
E+P++RIR
Sbjct: 69 EIPDRRIR 76


>sp|RL18A_SACI3|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 2 ELPEKRIR 9
E+P++RIR
Sbjct: 69 EIPDRRIR 76


>sp|RL18A_SACI2|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 2 ELPEKRIR 9
E+P++RIR
Sbjct: 69 EIPDRRIR 76


>sp|RL18A_SACI1|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 2 ELPEKRIR 9
E+P++RIR
Sbjct: 69 EIPDRRIR 76


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 3 LPEKRIRL 10
LPEKR RL
Sbjct: 620 LPEKRERL 627


>sp|RS10_THEON|SMALL ribosomal subunit protein uS10|Thermococcus onnurineus (strain

Query: 3 LPEKRIRL 10
LP KRIR+
Sbjct: 40 LPTKRIRI 47


>sp|RS10_THEGJ|SMALL ribosomal subunit protein uS10|Thermococcus gammatolerans (strain

Query: 3 LPEKRIRL 10
LP KRIR+
Sbjct: 40 LPTKRIRI 47


>sp|RS10_PYRWO|SMALL ribosomal subunit protein uS10|Pyrococcus woesei

Query: 3 LPEKRIRL 10
LP KRIR+
Sbjct: 40 LPTKRIRI 47


>sp|RS10_PYRFU|SMALL ribosomal subunit protein uS10|Pyrococcus furiosus (strain ATCC

Query: 3 LPEKRIRL 10
LP KRIR+
Sbjct: 40 LPTKRIRI 47


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 FELPEKRIR 9
+ELP K +R
Sbjct: 375 YELPHKELR 383


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 1 FELPEKR 7
ELPEKR
Sbjct: 491 LELPEKR 497


>sp|RS10_PYRAB|SMALL ribosomal subunit protein uS10|Pyrococcus abyssi (strain GE5 /

Query: 3 LPEKRIRL 10
LP KRIR+
Sbjct: 40 LPTKRIRI 47


>sp|RS10_PYRHO|SMALL ribosomal subunit protein uS10|Pyrococcus horikoshii (strain ATCC

Query: 3 LPEKRIRL 10
LP KRIR+
Sbjct: 40 LPTKRIRI 47


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 FELPEKRIR 9
+ELP K +R
Sbjct: 375 YELPHKELR 383


>sp|RNP1_THESM|RIBONUCLEASE P protein component 1|Thermococcus sibiricus (strain DSM 12597

Query: 1 FELPEKRIRL 10
FE+ +K+IR+
Sbjct: 97 FEVGDKKIRI 106


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 FELPEKRIR 9
+ELP K +R
Sbjct: 375 YELPHKELR 383




43|SequenceR|220|211|NLYQEFELPE

>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 2 LYQEFELP 9
++QEFELP
Sbjct: 876 IFQEFELP 883


>sp|RL6_SULTO|LARGE ribosomal subunit protein uL6|Sulfurisphaera tokodaii (strain DSM

Query: 1 NLYQEFELPE 10
+LY+E E+P+
Sbjct: 5 HLYEEIEIPQ 14


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 QEFELP 9
QEFELP
Sbjct: 709 QEFELP 714


>sp|Y523_METJA|UNCHARACTERIZED protein MJ0523|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LYQEFELP 9
L++EF+LP
Sbjct: 102 LFEEFKLP 109


>sp|IF5A_CALMQ|TRANSLATION initiation factor 5A|Caldivirga maquilingensis (strain ATCC

Query: 3 YQEFELP 9
YQ FE+P
Sbjct: 93 YQTFEIP 99


>sp|PYRDB_ARCFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Archaeoglobus fulgidus (strain

Query: 1 NLYQEFELP 9
+LY+E E+P
Sbjct: 227 DLYKEIEVP 235


>sp|RL6_STAMF|LARGE ribosomal subunit protein uL6|Staphylothermus marinus (strain

Query: 1 NLYQEFELPE 10
++Y+E ++PE
Sbjct: 6 HIYEEIDIPE 15


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NLYQEFELP 9
N+++EF++P
Sbjct: 50 NVFKEFDIP 58


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 2 LYQEFELPE 10
LY EF LP+
Sbjct: 470 LYSEFRLPK 478


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 LYQEFELPE 10
+Y+ FE PE
Sbjct: 197 MYEHFEPPE 205


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 LYQEFELP 9
++QEF LP
Sbjct: 340 MHQEFSLP 347


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LYQEFELP 9
L+QE E+P
Sbjct: 330 LFQELEIP 337


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NLYQEFELPE 10
+ +EFE+PE
Sbjct: 266 GITEEFEVPE 275


>sp|RL7A_AERPE|LARGE ribosomal subunit protein eL8|Aeropyrum pernix (strain ATCC

Query: 2 LYQEFELPE 10
+Y FE+PE
Sbjct: 5 IYVRFEVPE 13


>sp|Y2425_METAR|PROTEIN UNCMA_24250|Methanocella arvoryzae (strain DSM 22066

Query: 3 YQEFELPE 10
Y +FELP+
Sbjct: 27 YSKFELPK 34


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LYQEFELP 9
L+QE E+P
Sbjct: 330 LFQELEIP 337




44|SequenceR|225|216|KGFRLNLYQE

>sp|SPEE1_HYPBU|POLYAMINE aminopropyltransferase 1|Hyperthermus butylicus (strain DSM 5456

Query: 3 FRLNLYQ 9
FRLN+YQ
Sbjct: 6 FRLNIYQ 12


>sp|ARGJ_METJA|GLUTAMATE N-acetyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KGFRLNLYQE 10
KGF+ N Y+E
Sbjct: 12 KGFKANGYKE 21


>sp|THIM_METMA|HYDROXYETHYLTHIAZOLE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 FRLNLYQE 10
F++NLY E
Sbjct: 236 FKVNLYDE 243


>sp|THIM_METBF|HYDROXYETHYLTHIAZOLE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 FRLNLYQE 10
F++NLY E
Sbjct: 236 FKVNLYDE 243


>sp|EF1B_KORCO|ELONGATION factor 1-beta|Korarchaeum cryptofilum (strain OPF8)

Query: 1 KGFRLNLYQE 10
KGF+L Y E
Sbjct: 35 KGFKLEGYDE 44


>sp|PGP_METHJ|PHOSPHOGLYCOLATE phosphatase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KGFRLNLY 8
KG RL LY
Sbjct: 101 KGIRLELY 108


>sp|DHYS_SACS2|PROBABLE deoxyhypusine synthase|Saccharolobus solfataricus (strain ATCC

Query: 3 FRLNLYQE 10
FR+NL+++
Sbjct: 211 FRINLFED 218


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KGFRLNLYQE 10
K FR LY+E
Sbjct: 142 KAFRETLYKE 151


>sp|DHYS_METS5|PROBABLE deoxyhypusine synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GFRLNLYQE 10
G R+NL+++
Sbjct: 208 GLRINLFED 216




45|SequenceR|230|221|EDTSYKGFRL

>sp|DPHB_METST|DIPHTHINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EDTSYKGFR 9
+D SYKGF+
Sbjct: 13 DDISYKGFK 21


>sp|Y1498_SULAC|PARB-LIKE protein Saci_1498|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DTSYKGFRL 10
D SYKG R
Sbjct: 168 DFSYKGLRF 176


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 EDTSYKGFRL 10
+DT +GFRL
Sbjct: 561 KDTVIQGFRL 570


>sp|TIAS_CENSY|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Cenarchaeum symbiosum (strain

Query: 3 TSYKGFRL 10
T+Y GFRL
Sbjct: 27 TTYLGFRL 34


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 EDTSYKGFRL 10
+DT +GFRL
Sbjct: 563 KDTIIQGFRL 572


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 EDTSYKGFRL 10
+DT +GFRL
Sbjct: 563 KDTIIQGFRL 572


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 TSYKGF 8
TSY+GF
Sbjct: 429 TSYRGF 434


>sp|Y405_METJA|UNCHARACTERIZED protein MJ0405|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DTSYKGFRL 10
DT+Y+G+ L
Sbjct: 51 DTNYEGYVL 59


>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 1 EDTSYKGF 8
EDT KGF
Sbjct: 111 EDTILKGF 118


>sp|Y612_ARCFU|UNCHARACTERIZED protein AF_0612|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DTSYKGFRL 10
DT Y+GF +
Sbjct: 33 DTGYEGFAV 41




46|SequenceR|235|226|LSTISEDTSY

***** No hits found ******


47|SequenceR|240|231|VVFEALSTIS

>sp|RS5_METS3|SMALL ribosomal subunit protein uS5|Methanobrevibacter smithii (strain

Query: 2 VFEALSTIS 10
+F+AL T+S
Sbjct: 189 IFDALKTLS 197




48|SequenceR|245|236|PSIKQVVFEA

>sp|GPGS_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PSIKQVVFE 9
P IKQ++F+
Sbjct: 100 PRIKQIIFD 108


>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 1 PSIKQVVFE 9
P+IKQ+V E
Sbjct: 230 PNIKQIVAE 238




49|SequenceR|250|241|PESHRPSIKQ

>sp|LIPA_SULAC|LIPOYL synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 RPSIKQ 10
RPSIKQ
Sbjct: 224 RPSIKQ 229


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PESHRPSIKQ 10
PE HR IK+
Sbjct: 131 PELHREEIKE 140


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 1 PESHRPSIKQ 10
PESH +KQ
Sbjct: 557 PESHADDLKQ 566




50|SequenceR|255|246|LVRKVPESHR

>sp|ENDA_HALMA|TRNA-SPLICING endonuclease|Haloarcula marismortui (strain ATCC 43049

Query: 1 LVRKVPESHR 10
LVR +P HR
Sbjct: 284 LVRVLPADHR 293


>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 1 LVRKVPESH 9
+V KVP SH
Sbjct: 217 IVGKVPNSH 225


>sp|RL5_HALVD|LARGE ribosomal subunit protein uL5|Haloferax volcanii (strain ATCC 29605

Query: 3 RKVPESHR 10
R++P SHR
Sbjct: 145 RQIPSSHR 152


>sp|RL5_HALMT|LARGE ribosomal subunit protein uL5|Haloferax mediterranei (strain ATCC

Query: 3 RKVPESHR 10
R++P SHR
Sbjct: 145 RQIPSSHR 152


>sp|RL5_METBF|LARGE ribosomal subunit protein uL5|Methanosarcina barkeri (strain Fusaro

Query: 3 RKVPESHR 10
RK+P +HR
Sbjct: 143 RKIPTNHR 150


>sp|RL5_METBU|LARGE ribosomal subunit protein uL5|Methanococcoides burtonii (strain DSM

Query: 3 RKVPESHR 10
RK+P SH+
Sbjct: 143 RKIPTSHK 150


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 RKVPESHR 10
+KVP+ HR
Sbjct: 486 QKVPDPHR 493


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 VRKVPESHR 10
+RKVP S +
Sbjct: 128 IRKVPHSEK 136


>sp|RL5_METAC|LARGE ribosomal subunit protein uL5|Methanosarcina acetivorans (strain

Query: 3 RKVPESHR 10
RK+P HR
Sbjct: 139 RKIPAGHR 146


>sp|WTPA_THEKO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VRKVPESHR 10
VRKV + HR
Sbjct: 82 VRKVTDLHR 90


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LVRKVPESH 9
++KVPE H
Sbjct: 29 FLKKVPEDH 37


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 LVRKVPESH 9
LVRKV E H
Sbjct: 280 LVRKVKEVH 288


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 RKVPESHR 10
R+VP+ HR
Sbjct: 540 REVPDLHR 547


>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 1 LVRKVPESH 9
++KVPE H
Sbjct: 29 FLKKVPEDH 37


>sp|RL5_METMA|LARGE ribosomal subunit protein uL5|Methanosarcina mazei (strain ATCC

Query: 3 RKVPESHR 10
RK+P HR
Sbjct: 143 RKIPTDHR 150


>sp|RL5_HALSA|LARGE ribosomal subunit protein uL5|Halobacterium salinarum (strain ATCC

Query: 3 RKVPESHR 10
R++P +HR
Sbjct: 148 RQIPSNHR 155


>sp|RL5_HALS3|LARGE ribosomal subunit protein uL5|Halobacterium salinarum (strain ATCC

Query: 3 RKVPESHR 10
R++P +HR
Sbjct: 148 RQIPSNHR 155


>sp|CHEB2_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina mazei

Query: 4 KVPESHR 10
++PE+HR
Sbjct: 157 QIPENHR 163


>sp|RL5_METS3|LARGE ribosomal subunit protein uL5|Methanobrevibacter smithii (strain

Query: 3 RKVPESHR 10
+KVP HR
Sbjct: 142 KKVPAKHR 149


>sp|RL34_METJA|LARGE ribosomal subunit protein eL34|Methanocaldococcus jannaschii

Query: 2 VRKVPESHR 10
+RK+P+S R
Sbjct: 55 IRKLPKSQR 63




51|SequenceR|260|251|TETLALVRKV

>sp|TPIS_PYRAB|TRIOSEPHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 TETLALVRKV 10
T+T+ LVRKV
Sbjct: 163 TDTVELVRKV 172


>sp|GGGPS_THEGJ|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 ETLALVRKV 10
E +ALVRKV
Sbjct: 188 EMIALVRKV 196


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TETLALVRK 9
+ET+ LVRK
Sbjct: 190 SETVGLVRK 198


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 2 ETLALVRKV 10
ETL +VRK+
Sbjct: 771 ETLEIVRKL 779


>sp|TYW32_PYRFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 TETLALVRKV 10
TE+L L RK+
Sbjct: 101 TESLELARKI 110


>sp|KHSE_THEVO|HOMOSERINE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TETLALVRKV 10
TET ++RK+
Sbjct: 269 TETKQMIRKI 278




52|SequenceR|265|256|REVLCTETLA

>sp|NASC_HALMT|PROBABLE molybdenum cofactor guanylyltransferase|Haloferax mediterranei

Query: 2 EVLCTETL 9
EV CTET+
Sbjct: 154 EVACTETI 161


>sp|LEUC_NATPD|3-ISOPROPYLMALATE dehydratase large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 REVLCTETLA 10
R+VL T+T+A
Sbjct: 151 RDVLATQTIA 160


>sp|LEUC_HALMA|3-ISOPROPYLMALATE dehydratase large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 REVLCTETLA 10
R+VL T+T+A
Sbjct: 151 RDVLATQTIA 160


>sp|Y1059_METJA|UNCHARACTERIZED glycosyltransferase MJ1059|Methanocaldococcus jannaschii (strain

Query: 1 REVLCTE 7
RE+LC E
Sbjct: 313 REILCPE 319


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 REVLCTETLA 10
R+VL T+T+A
Sbjct: 151 RDVLATQTVA 160


>sp|Y2739_METHJ|UPF0758 protein Mhun_2739|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EVLCTETL 9
EV+CT T+
Sbjct: 136 EVICTRTI 143




53|SequenceR|270|261|YTAPDREVLC

>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YTAPDREVL 9
Y PDRE++
Sbjct: 345 YMGPDREIV 353


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 YTAPDREVL 9
Y PDRE++
Sbjct: 258 YDVPDRELI 266


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 YTAPDREVLC 10
YT D E LC
Sbjct: 655 YTGADIEALC 664


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YTAPDREVL 9
YTA D EVL
Sbjct: 10 YTAKDIEVL 18


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 YTAPDREVL 9
Y+ P REV+
Sbjct: 89 YSLPSREVI 97


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YTAPDREVL 9
Y+ P REV+
Sbjct: 89 YSLPSREVI 97


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YTAPDREVL 9
Y+ P REV+
Sbjct: 89 YSLPSREVI 97


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YTAPDREVL 9
Y+ P REV+
Sbjct: 89 YSLPSREVI 97


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YTAPDREVL 9
Y+ P REV+
Sbjct: 89 YSLPSREVI 97


>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 4 PDREVLC 10
PDR+++C
Sbjct: 231 PDRKIIC 237


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 YTAPDREVLC 10
+T PD LC
Sbjct: 353 FTMPDMHTLC 362


>sp|NDK_METTH|NUCLEOSIDE diphosphate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 YTAPDREVL 9
Y PDRE++
Sbjct: 139 YEMPDREMI 147


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DREVLC 10
DRE+LC
Sbjct: 366 DREMLC 371


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 4 PDREVLC 10
PDR LC
Sbjct: 203 PDRPALC 209


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YTAPDREVLC 10
+T PD LC
Sbjct: 352 FTMPDMHTLC 361


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 YTAPDREVLC 10
+T PD LC
Sbjct: 354 FTMPDMHTLC 363


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YTAPDREVLC 10
+T PD LC
Sbjct: 353 FTMPDMHTLC 362


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YTAPDREVLC 10
+T PD LC
Sbjct: 333 FTMPDMHTLC 342


>sp|FWDB_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 4 PDREVL 9
PDRE+L
Sbjct: 419 PDREIL 424


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YTAPDREVLC 10
+T PD LC
Sbjct: 332 FTMPDMHSLC 341


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 YTAPDREVLC 10
+T PD LC
Sbjct: 332 FTMPDMHSLC 341


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 YTAPDREVLC 10
+T PD LC
Sbjct: 336 FTMPDMHSLC 345


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YTAPDREVLC 10
+T PD LC
Sbjct: 353 FTMPDMHSLC 362


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YTAPDREV 8
YTAPD V
Sbjct: 139 YTAPDGSV 146




54|SequenceR|275|266|LTAINYTAPD

>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 AINYTAPD 10
AINY PD
Sbjct: 241 AINYGKPD 248


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TAINYTAPD 10
TA+ YTA D
Sbjct: 6 TAVEYTAKD 14


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 LTAINYTAP 9
+ A+NYT+P
Sbjct: 2691 MAALNYTSP 2699


>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 1 LTAINYTA 8
+TA+NY A
Sbjct: 107 VTAVNYAA 114




55|SequenceR|280|271|EGLPKLTAIN

>sp|IMDH_THEAC|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GLPKLTAIN 10
G+P+LTAI+
Sbjct: 311 GVPQLTAIS 319


>sp|FENR_METS5|FERREDOXIN--NADP reductase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EGLPKLTAI 9
EG+PKL I
Sbjct: 287 EGMPKLALI 295


>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 1 EGLPKLTAI 9
EGL KLT++
Sbjct: 532 EGLSKLTSV 540


>sp|ARGC_METMP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EGLPKLTAI 9
EG+P LT +
Sbjct: 276 EGMPSLTGV 284


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 2 GLPKLTAI 9
G P+LTAI
Sbjct: 345 GKPRLTAI 352


>sp|IMDH_HALSA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GLPKLTAIN 10
G+P++TA++
Sbjct: 324 GMPQITAVS 332


>sp|RL34_THEPD|LARGE ribosomal subunit protein eL34|Thermofilum pendens (strain DSM

Query: 1 EGLPKLTA 8
+G+PKLT+
Sbjct: 45 QGVPKLTS 52


>sp|LEU3_METTH|3-ISOPROPYLMALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EGLPKLTAIN 10
EG+ K+TA++
Sbjct: 157 EGMQKVTAVH 166


>sp|IMDH_NITMS|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 GLPKLTAI 9
G+P+LTA+
Sbjct: 310 GVPQLTAV 317


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 1 EGLPKLTAI 9
EGLP+L A+
Sbjct: 208 EGLPELLAL 216


>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GLPKLTAIN 10
GLP++ A+N
Sbjct: 71 GLPEIRALN 79


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GLPKLTAI 9
G+P+LTA+
Sbjct: 315 GVPQLTAV 322


>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GLPKLTAIN 10
GLPK A+N
Sbjct: 278 GLPKDVALN 286


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GLPKLTAIN 10
GLPK A+N
Sbjct: 278 GLPKDVALN 286


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 EGLPKLTAI 9
EG+P+L A+
Sbjct: 214 EGIPELLAV 222


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GLPKLTAI 9
G+P LTA+
Sbjct: 271 GVPSLTAV 278


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GLPKLTAI 9
G+P++TAI
Sbjct: 310 GVPQITAI 317


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GLPKLTAI 9
G+P LTA+
Sbjct: 270 GVPSLTAV 277


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 2 GLPKLTAI 9
G+P++TAI
Sbjct: 310 GVPQITAI 317


>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GLPKLTAI 9
G+P LTA+
Sbjct: 274 GVPSLTAV 281




56|SequenceR|285|276|VLAFVEGLPK

>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 4 FVEGLPK 10
F+EGLPK
Sbjct: 333 FLEGLPK 339


>sp|RIFK_PYRAE|RIBOFLAVIN kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LAFVEGLP 9
L++VEGLP
Sbjct: 15 LSYVEGLP 22


>sp|G1PDH_THEPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermofilum pendens (strain DSM 2475

Query: 3 AFVEGLP 9
AF+EGLP
Sbjct: 100 AFMEGLP 106


>sp|FENR_METS5|FERREDOXIN--NADP reductase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LAFVEGLPK 10
+A VEG+PK
Sbjct: 283 IASVEGMPK 291


>sp|THI4_HALWD|THIAMINE thiazole synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LAFVEGLPK 10
+A VEGLP+
Sbjct: 259 VATVEGLPR 267


>sp|ENDA_METMP|TRNA-SPLICING endonuclease|Methanococcus maripaludis (strain DSM 14266

Query: 2 LAFVEGL 8
L+FVEGL
Sbjct: 44 LSFVEGL 50


>sp|KHSE_THEAC|HOMOSERINE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 AFVEGLP 9
AFVEG P
Sbjct: 301 AFVEGSP 307


>sp|FEN_HALWD|FLAP endonuclease 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VLAFVEGLPK 10
++ V+GLPK
Sbjct: 60 LIGVVQGLPK 69


>sp|FEN_HALMA|FLAP endonuclease 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 VLAFVEGLPK 10
++ V+GLPK
Sbjct: 60 LIGVVQGLPK 69


>sp|Y273_HALLT|PUTATIVE HTH-type transcriptional regulatory protein|Halorubrum

Query: 4 FVEGLP 9
FVEG+P
Sbjct: 108 FVEGMP 113


>sp|FEN_NATPD|FLAP endonuclease 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VLAFVEGLPK 10
++ V+GLPK
Sbjct: 60 LIGVVQGLPK 69


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLAFVEGLPK 10
+LAF++ +PK
Sbjct: 137 LLAFIKDMPK 146


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LAFVEGLPK 10
L VEGLPK
Sbjct: 143 LKKVEGLPK 151


>sp|TBP_AERPE|TATA-BOX-BINDING protein|Aeropyrum pernix (strain ATCC 700893

Query: 5 VEGLPK 10
VEGLPK
Sbjct: 15 VEGLPK 20


>sp|Y1659_METJA|UNCHARACTERIZED ATP-binding protein MJ1659|Methanocaldococcus jannaschii (strain

Query: 1 VLAFVEGLPK 10
+L+F+ LPK
Sbjct: 94 LLSFINDLPK 103


>sp|KAE1_AERPE|TRNA N6-adenosine threonylcarbamoyltransferase|Aeropyrum pernix (strain

Query: 3 AFVEGLP 9
FVEG+P
Sbjct: 198 GFVEGIP 204


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 VLAFVEGLPK 10
++ FV+ LPK
Sbjct: 524 IIEFVDELPK 533




57|SequenceR|290|281|NESDCVLAFV

>sp|NPD_SULAC|NAD-DEPENDENT protein deacetylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NESDCVLA 8
NESD VLA
Sbjct: 181 NESDLVLA 188


>sp|KAD_METAC|ADENYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NESDCVLAFV 10
NE+DC F+
Sbjct: 73 NEADCEKGFI 82


>sp|SRP54_HALSA|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 1 NESDCVLAFV 10
NE+D +AF+
Sbjct: 258 NETDSTIAFL 267


>sp|SRP54_HALS3|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 1 NESDCVLAFV 10
NE+D +AF+
Sbjct: 258 NETDSTIAFL 267


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 1 NESDCVLAFV 10
NE+D +AF+
Sbjct: 258 NETDSTIAFL 267


>sp|KAD_METMA|ADENYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NESDCVLAFV 10
NE DC F+
Sbjct: 73 NEEDCKKGFI 82




58|SequenceR|295|286|TFLQPNESDC

>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 TFLQPNES 8
TFL+P ES
Sbjct: 111 TFLEPGES 118


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 2 FLQPNESD 9
FL+P+E+D
Sbjct: 122 FLKPDETD 129


>sp|DUT_ARCFU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Archaeoglobus

Query: 1 TFLQPNESDC 10
T +QPN DC
Sbjct: 27 TQIQPNGFDC 36


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 FLQPNESD 9
FL+P+E+D
Sbjct: 300 FLEPSEND 307


>sp|PFDA_PICTO|PREFOLDIN subunit alpha|Picrophilus torridus (strain ATCC 700027

Query: 1 TFLQPNESD 9
+FL+ NESD
Sbjct: 44 SFLKDNESD 52


>sp|ARSA_METTH|PUTATIVE arsenical pump-driving ATPase|Methanothermobacter

Query: 5 PNESDC 10
P ESDC
Sbjct: 263 PEESDC 268


>sp|RPO3_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo3|Aeropyrum pernix (strain ATCC 700893

Query: 4 QPNESDC 10
+P+E DC
Sbjct: 92 EPSEEDC 98


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 5 PNESDC 10
PN SDC
Sbjct: 524 PNYSDC 529


>sp|RPO3_METST|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosphaera stadtmanae (strain

Query: 1 TFLQPNESDC 10
+++ P+E DC
Sbjct: 73 SYVMPSECDC 82




59|SequenceR|300|291|KIFEITFLQP

>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KIFEITFLQP 10
++FE+T+L P
Sbjct: 243 EVFEVTYLAP 252


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KIFEITFL 8
K+FE+T+L
Sbjct: 243 KVFEVTYL 250


>sp|SYP_PYRIL|PROLINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KIFEITFL 8
K+FE+T+L
Sbjct: 243 KVFEVTYL 250


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KIFEITFL 8
++FE+T+L
Sbjct: 243 RVFEVTYL 250


>sp|SYP_PYRNV|PROLINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KIFEITFL 8
++FE+T+L
Sbjct: 242 RVFEVTYL 249


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KIFEITFL 8
KIFE TFL
Sbjct: 273 KIFERTFL 280


>sp|Y1005_PYRIL|PROTEIN Pisl_1005|Pyrobaculum islandicum (strain DSM 4184

Query: 2 IFEITFLQP 10
IFE++ L P
Sbjct: 104 IFEVSILSP 112


>sp|Y745_PYRAE|PROTEIN PAE0745|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IFEITFLQP 10
IFE++ L P
Sbjct: 104 IFEVSILSP 112


>sp|Y181_METJA|UNCHARACTERIZED protein MJ0181|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIFEITFLQP 10
KIF I+F P
Sbjct: 3 KIFNISFSMP 12




60|SequenceR|305|296|KRVQGKIFEI

>sp|PIMT_METM7|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 KRVQGKIFE 9
K++ GKIFE
Sbjct: 187 KKIHGKIFE 195


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 4 QGKIFEI 10
QGKIF+I
Sbjct: 123 QGKIFQI 129


>sp|TRMBR_HALSA|HTH-TYPE sugar sensing transcriptional regulator|Halobacterium salinarum

Query: 1 KRVQGKIFE 9
+R+QG+I E
Sbjct: 295 RRIQGRIVE 303


>sp|UDGA_ARCFU|TYPE-4 uracil-DNA glycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RVQGKIFEI 10
RV+GK++E+
Sbjct: 141 RVKGKVYEV 149


>sp|RNZ_NANEQ|RIBONUCLEASE Z|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 RVQGKIFEI 10
R QG +FEI
Sbjct: 265 RYQGSLFEI 273


>sp|TRM56_ARCFU|TRNA (cytidine(56)-2'-O)-methyltransferase|Archaeoglobus fulgidus

Query: 2 RVQGKIFEI 10
RV GK+F+I
Sbjct: 139 RVLGKVFDI 147


>sp|Y1344_THEGJ|UPF0212 protein TGAM_1344|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KRVQGKIFEI 10
KRV K+FEI
Sbjct: 101 KRVPLKVFEI 110


>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VQGKIFEI 10
VQGK FEI
Sbjct: 40 VQGKEFEI 47


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KRVQGKIFEI 10
KR++GK+ +
Sbjct: 195 KRIRGKVLSV 204


>sp|PCC1_PYRAB|KEOPS complex subunit Pcc1|Pyrococcus abyssi (strain GE5 /

Query: 1 KRVQGKI 7
KRVQGKI
Sbjct: 4 KRVQGKI 10


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 VQGKIFEI 10
+QG IF+I
Sbjct: 68 IQGNIFDI 75


>sp|Y4416_NATPD|DNA-BINDING protein NP_4416A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RVQGKIFE 9
R+QGKI E
Sbjct: 86 RIQGKIDE 93


>sp|SDO1_PYRHO|RIBOSOME maturation protein SDO1 homolog|Pyrococcus horikoshii (strain

Query: 2 RVQGKIFEI 10
++QG+ FEI
Sbjct: 14 KIQGETFEI 22


>sp|PIMT_METM5|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 KRVQGKIF 8
K++ GKIF
Sbjct: 187 KKINGKIF 194




61|SequenceR|310|301|ETSSYKRVQG

>sp|NNR_KORCO|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Korarchaeum cryptofilum (strain

Query: 3 SSYKRVQG 10
S+YKR++G
Sbjct: 94 SNYKRIEG 101


>sp|IPYR_METKA|INORGANIC pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 3 SSYKRVQG 10
S YKR++G
Sbjct: 139 SEYKRLEG 146




62|SequenceR|315|306|LLSDRETSSY

***** No hits found ******


63|SequenceR|320|311|DLLSALLSDR

>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DLLSALLSDR 10
D+L +LSDR
Sbjct: 322 DVLGKVLSDR 331


>sp|PPAC_METJA|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanocaldococcus jannaschii (strain

Query: 2 LLSALLSD 9
LLSA++SD
Sbjct: 140 LLSAIISD 147


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLLSALLSDR 10
DLL A SDR
Sbjct: 357 DLLDAPFSDR 366


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DLLSALLSDR 10
DLL A SDR
Sbjct: 357 DLLDAPFSDR 366




64|SequenceR|325|316|SARVGDLLSA

>sp|RS17_METHJ|SMALL ribosomal subunit protein uS17|Methanospirillum hungatei JF-1

Query: 2 ARVGDLLS 9
ARVGD++S
Sbjct: 80 ARVGDMVS 87


>sp|Y2328_HALVD|UNCHARACTERIZED isochorismatase family protein HVO_2328|Haloferax volcanii

Query: 1 SARVGDLLSA 10
ARV DLL+A
Sbjct: 35 EARVADLLAA 44


>sp|PURA_NATPD|ADENYLOSUCCINATE synthetase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 RVGDLLSA 10
R+GDLL A
Sbjct: 145 RIGDLLDA 152


>sp|PURA_HALSA|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 3 RVGDLLS 9
RVGDLL+
Sbjct: 145 RVGDLLN 151


>sp|PURA_HALS3|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 3 RVGDLLS 9
RVGDLL+
Sbjct: 145 RVGDLLN 151




65|SequenceR|330|321|VDRNGSARVG

>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 DRNGSARVG 10
+R+G+AR+G
Sbjct: 9 NRDGAARIG 17


>sp|HEM1_THEAC|GLUTAMYL-TRNA reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DRNGSARV 9
+RNGSAR+
Sbjct: 269 NRNGSARM 276


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VDRNGSA 7
V+RNGSA
Sbjct: 390 VERNGSA 396


>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 3 RNGSARVG 10
R+G+AR+G
Sbjct: 10 RDGAARIG 17


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VDRNGSARVG 10
V NG A+VG
Sbjct: 18 VKHNGQAQVG 27


>sp|IMDH_HALSA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DRNGSARVG 10
D+NG RVG
Sbjct: 227 DQNGRLRVG 235




66|SequenceR|335|326|TMKVCVDRNG

>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MKVCVDRNG 10
MK+CV R G
Sbjct: 345 MKLCVHRKG 353


>sp|Y3521_METJA|UNCHARACTERIZED protein MJECL21|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VCVDRN 9
VC+DRN
Sbjct: 135 VCIDRN 140


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MKVCVDRNG 10
+K C+DR G
Sbjct: 629 VKKCIDRAG 637


>sp|ASPD_METVS|L-ASPARTATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TMKVCVDRN 9
T+K CV+ N
Sbjct: 228 TIKTCVENN 236


>sp|PURT_SULAC|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfolobus

Query: 2 MKVCVDR 8
+K+C+DR
Sbjct: 107 VKICMDR 113


>sp|PYRK_METMA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina mazei

Query: 5 CVDRNG 10
C+DR+G
Sbjct: 220 CIDRSG 225


>sp|GATE_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C7 /

Query: 3 KVCVDRNG 10
K CVDR G
Sbjct: 174 KYCVDRLG 181


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 3 KVCVDRNG 10
K CVDR G
Sbjct: 174 KYCVDRLG 181


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 3 KVCVDRNG 10
K CVDR G
Sbjct: 174 KYCVDRLG 181


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 3 KVCVDRNG 10
K CVDR G
Sbjct: 174 KYCVDRLG 181


>sp|ASPD_METMP|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TMKVCVDRN 9
T+K CV+ N
Sbjct: 228 TIKTCVENN 236


>sp|ASPD_METM7|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 TMKVCVDRN 9
T+K CV+ N
Sbjct: 228 TIKTCVENN 236


>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 3 KVCVDRNG 10
K CVDR G
Sbjct: 174 KYCVDRLG 181


>sp|ASPD_METM6|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 1 TMKVCVDRN 9
T+K CV+ N
Sbjct: 228 TIKTCVENN 236


>sp|ASPD_METM5|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 TMKVCVDRN 9
T+K CV+ N
Sbjct: 228 TIKTCVENN 236


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 3 KVCVDRNG 10
K+C+ NG
Sbjct: 93 KICIAHNG 100


>sp|DAPB_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 TMKVCVDRNG 10
T++ C++R+G
Sbjct: 113 TVRDCIERSG 122




67|SequenceR|340|331|GKHTPTMKVC

>sp|TRPG_SACS2|ANTHRANILATE synthase component 2|Saccharolobus solfataricus (strain ATCC

Query: 1 GKHTPTMKVC 10
GK TP + VC
Sbjct: 75 GKRTPILGVC 84


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GKHTPTMKV 9
GK TP M+V
Sbjct: 294 GKRTPVMRV 302


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GKHTPTM 7
G HTPT+
Sbjct: 236 GAHTPTV 242


>sp|PCP_THELN|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus litoralis (strain ATCC 51850

Query: 1 GKHTPTM 7
GK+TP+M
Sbjct: 183 GKNTPSM 189


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KHTPTM 7
KHTPT+
Sbjct: 131 KHTPTV 136


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GKHTPTMKV 9
GK PT++V
Sbjct: 416 GKEDPTLRV 424


>sp|HIS2_META3|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KHTPTMKVC 10
K TP K+C
Sbjct: 32 KKTPINKIC 40


>sp|APGM_META3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus aeolicus (strain ATCC

Query: 3 HTPTM 7
HTPTM
Sbjct: 27 HTPTM 31


>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKHTPTMKVC 10
GK + T K+C
Sbjct: 75 GKESTTPKIC 84


>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 2 KHTPTMKVC 10
K+ P MK C
Sbjct: 94 KNDPEMKAC 102




68|SequenceR|345|336|LGWRQGKHTP

>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GWRQGKH 8
GWRQ KH
Sbjct: 339 GWRQVKH 345


>sp|CDPAS_METVS|CDP-ARCHAEOL synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LGWRQGKHTP 10
LG++QG+ P
Sbjct: 115 LGFKQGQSAP 124


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 2 GWRQGKHTP 10
GWR TP
Sbjct: 145 GWRANPDTP 153


>sp|HIS4_NITMS|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Nitrosopumilus maritimus (strain

Query: 2 GWRQGKHTP 10
GW++ TP
Sbjct: 138 GWQESTKTP 146


>sp|SUMT_METJA|UROPORPHYRINOGEN-III C-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LGWRQGKHT 9
+G R+GKH+
Sbjct: 55 VGKRKGKHS 63


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 2 GWRQGKH 8
GW +G H
Sbjct: 262 GWMRGSH 268


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GWRQGKH 8
GW +G H
Sbjct: 267 GWMRGSH 273


>sp|HIS5_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii (strain

Query: 1 LGWRQGK 7
LGW +GK
Sbjct: 95 LGWFKGK 101


>sp|SOR_ARCFU|PUTATIVE superoxide reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WRQGKHTP 10
W++ KH P
Sbjct: 9 WKKEKHVP 16


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GWRQGKH 8
GW +G H
Sbjct: 262 GWMRGSH 268


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GWRQGKH 8
GW +G H
Sbjct: 262 GWMRGSH 268


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GWRQGKH 8
GW +G H
Sbjct: 263 GWMRGSH 269


>sp|KCY_NATPD|CYTIDYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GWRQGKH 8
GW G+H
Sbjct: 85 GWMAGEH 91


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GWRQGKH 8
GW +G H
Sbjct: 263 GWMRGSH 269


>sp|PYRC_PYRHO|DIHYDROOROTASE horikoshii (strain ATCC 700860

Query: 2 GWRQGK 7
GW +GK
Sbjct: 333 GWEEGK 338




69|SequenceR|350|341|VPMSLLGWRQ

>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 1 VPMSLLGWR 9
+PMS + WR
Sbjct: 168 IPMSNIKWR 176


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 1 VPMSLLGWR 9
VP+ + GW+
Sbjct: 62 VPVHIFGWK 70


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC

Query: 1 VPMSLLGWR 9
VP++ LG+R
Sbjct: 41 VPLAFLGYR 49


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 VPMSLLGWRQ 10
+ S+LGW++
Sbjct: 204 IDQSVLGWKE 213


>sp|Y585_METJA|UNCHARACTERIZED protein MJ0585|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPMSLLGW 8
+P+S+ GW
Sbjct: 184 IPISMYGW 191


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 1 VPMSLLGW 8
+PM + GW
Sbjct: 280 MPMRITGW 287


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 4 SLLGWRQ 10
S+LGW++
Sbjct: 207 SVLGWKE 213


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 4 SLLGWRQ 10
S+LGW++
Sbjct: 206 SVLGWKE 212


>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 1 VPMSLLGWRQ 10
+P+ +L W Q
Sbjct: 253 IPLGILYWNQ 262


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PMSLLGW 8
P+S+ GW
Sbjct: 466 PLSVAGW 472




70|SequenceR|355|346|EVEEDVPMSL

>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EVEEDVPMS 9
E E D+P+S
Sbjct: 53 EAENDIPLS 61


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 VEEDVPM 8
+EEDVP+
Sbjct: 18 LEEDVPL 24


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 VEEDVPM 8
+EEDVP+
Sbjct: 18 LEEDVPL 24


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EVEEDVPM 8
EVEED P+
Sbjct: 230 EVEEDKPL 237


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 1 EVEEDVPMS 9
++EED P S
Sbjct: 225 QIEEDAPAS 233




71|SequenceR|360|351|RLHLSEVEED

>sp|ARCC_THEVO|CARBAMATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RLHLSEVEE 9
R+HL+E+E+
Sbjct: 245 RIHLNEIEK 253


>sp|KTHY_METMP|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 HLSEVEED 10
H+S++EED
Sbjct: 68 HVSKIEED 75


>sp|KTHY_METM7|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain C7 /

Query: 3 HLSEVEED 10
H+S++EED
Sbjct: 68 HVSKIEED 75


>sp|KTHY_METM6|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain C6 /

Query: 3 HLSEVEED 10
H+S++EED
Sbjct: 68 HVSKIEED 75




72|SequenceR|365|356|PTALFRLHLS

>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TALFRLHL 9
T L+RLH+
Sbjct: 558 TVLYRLHM 565




73|SequenceR|370|361|FNGNPPTALF

>sp|CBIC_METJA|COBALT-PRECORRIN-8 methylmutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GNPPTALF 10
GN PTALF
Sbjct: 134 GNSPTALF 141


>sp|RS4_METS5|SMALL ribosomal subunit protein uS4|Metallosphaera sedula (strain ATCC

Query: 1 FNGNPPTA 8
F NPPTA
Sbjct: 161 FKNNPPTA 168


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FNGNPPTAL 9
F GNPPT +
Sbjct: 44 FIGNPPTKI 52


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FNGNPPTAL 9
F GNPPT +
Sbjct: 49 FIGNPPTKV 57


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FNGNPPT 7
F GNPPT
Sbjct: 44 FIGNPPT 50


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 FNGNPPTALF 10
NGNP +AL
Sbjct: 464 LNGNPTSALL 473


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 1 FNGNPPTA 8
FNGNP +A
Sbjct: 301 FNGNPVSA 308


>sp|CDC6A_HALMA|ORC1-TYPE DNA replication protein 1|Haloarcula marismortui (strain ATCC

Query: 2 NGNPPTALF 10
NG PP LF
Sbjct: 47 NGAPPKNLF 55


>sp|FEN_CENSY|FLAP endonuclease 1|Cenarchaeum symbiosum (strain A)

Query: 1 FNGNPPT 7
F+G PPT
Sbjct: 79 FDGRPPT 85


>sp|TRMY_METVS|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 2 NGNPPTAL 9
N NPP AL
Sbjct: 59 NPNPPVAL 66


>sp|HTPX_PYRFU|PROTEASE HtpX homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NGNPPTA 8
NGNP TA
Sbjct: 242 NGNPATA 248


>sp|HTPX_THESM|PROTEASE HtpX homolog|Thermococcus sibiricus (strain DSM 12597

Query: 2 NGNPPTA 8
NGNP TA
Sbjct: 245 NGNPATA 251


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NGNPPTALF 10
N PP A+F
Sbjct: 343 NNEPPQAIF 351


>sp|RS8E_METKA|SMALL ribosomal subunit protein eS8|Methanopyrus kandleri (strain AV19

Query: 3 GNPPT 7
GNPPT
Sbjct: 29 GNPPT 33


>sp|COXX_SULTO|PROTOHEME IX farnesyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FNGNPPTALF 10
F NP TALF
Sbjct: 122 FLANPLTALF 131


>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FNGNPPTALF 10
F GNP +A F
Sbjct: 108 FTGNPGSADF 117


>sp|CBIC_METTH|COBALT-PRECORRIN-8 methylmutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 GNPPTAL 9
GN PTAL
Sbjct: 130 GNAPTAL 136


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 NGNPPTALF 10
NGNP T F
Sbjct: 1015 NGNPTTTTF 1023


>sp|Y727_METJA|UNCHARACTERIZED protein MJ0727|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NGNPPTALF 10
NG P TAL+
Sbjct: 164 NGLPKTALY 172


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 1 FNGNPPTALF 10
F+GNP T +
Sbjct: 462 FSGNPETKAY 471


>sp|RIFK_HYPBU|RIBOFLAVIN kinase|Hyperthermus butylicus (strain DSM 5456

Query: 1 FNGNPPTAL 9
+G+PPT L
Sbjct: 104 LSGHPPTVL 112


>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 3 GNPPTALF 10
G P TALF
Sbjct: 12 GKPGTALF 19


>sp|MER_ARCFU|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GNPPTAL 9
G+PPT L
Sbjct: 235 GSPPTVL 241


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 FNGNP 5
FNGNP
Sbjct: 301 FNGNP 305


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NGNPPTAL 9
NGNP T L
Sbjct: 146 NGNPTTEL 153


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 FNGNP 5
FNGNP
Sbjct: 301 FNGNP 305


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 1 FNGNP 5
FNGNP
Sbjct: 301 FNGNP 305


>sp|ACDA2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 2 NGNPPTALF 10
NG P ALF
Sbjct: 402 NGKPVLALF 410


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FNGNP 5
FNGNP
Sbjct: 292 FNGNP 296




74|SequenceR|375|366|FVADAFNGNP

>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FVADAFNGNP 10
+ A FNGNP
Sbjct: 290 YQAGTFNGNP 299


>sp|TFE_METVS|TRANSCRIPTION factor E|Methanococcus vannielii (strain ATCC 35089

Query: 1 FVADAFNGNP 10
++ D FN NP
Sbjct: 161 YIEDEFNQNP 170


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 1 FVADAFNGNP 10
+ A FNGNP
Sbjct: 296 YQAGTFNGNP 305


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FVADAFNGNP 10
+ A FNGNP
Sbjct: 294 YQAGTFNGNP 303


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FVADAFNGNP 10
+ A FNGNP
Sbjct: 287 YQAGTFNGNP 296


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FVADAFNGNP 10
+ A FNGNP
Sbjct: 288 YNAGTFNGNP 297


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FVADAFNGNP 10
+ A FNGNP
Sbjct: 296 YQAGTFNGNP 305


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 FVADAFNGNP 10
+ A FNGNP
Sbjct: 296 YQAGTFNGNP 305


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 1 FVADAFNGNP 10
+ A FNGNP
Sbjct: 296 YQAGTFNGNP 305


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 FVADAFNGNP 10
+ A FNGNP
Sbjct: 296 YQAGTFNGNP 305


>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FVADAFNGNP 10
FVA NGNP
Sbjct: 383 FVAKDENGNP 392


>sp|TFE_METM7|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C7 /

Query: 1 FVADAFNGNP 10
++ D FN NP
Sbjct: 161 YLEDEFNKNP 170


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FVADAFNGNP 10
+ A FNGNP
Sbjct: 296 YQAGTFNGNP 305


>sp|TFE_METMP|TRANSCRIPTION factor E|Methanococcus maripaludis (strain DSM 14266

Query: 1 FVADAFNGNP 10
++ D FN NP
Sbjct: 161 YLEDEFNKNP 170


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FVADAFNGNP 10
+ A FNGNP
Sbjct: 299 YQAGTFNGNP 308


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 1 FVADAFNGN 9
+VA AFN N
Sbjct: 688 YVARAFNSN 696


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 FVADAFNGN 9
+VA AFN N
Sbjct: 381 YVARAFNSN 389


>sp|RADA_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 FVADAFNGN 9
+VA AFN N
Sbjct: 201 YVARAFNSN 209


>sp|RADA_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 FVADAFNGN 9
+VA AFN N
Sbjct: 205 YVARAFNSN 213


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FVADAFNGNP 10
F A FN NP
Sbjct: 287 FNAGTFNANP 296


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FVADAFNGNP 10
F A FN NP
Sbjct: 296 FNAGTFNANP 305


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 FVADAFNGNP 10
F A FN NP
Sbjct: 296 FNAGTFNANP 305


>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FVADAFNGNP 10
F A FN NP
Sbjct: 296 FNAGTFNANP 305


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FVADAFNGNP 10
F A FN NP
Sbjct: 296 FNAGTFNANP 305


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FVADAFNGNP 10
F A FN NP
Sbjct: 296 FNAGTFNANP 305


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FVADAFNGNP 10
F A FN NP
Sbjct: 296 FNAGTFNANP 305


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FVADAFNGNP 10
F A FN NP
Sbjct: 288 FNAGTFNANP 297


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FVADAFNGNP 10
F A FN NP
Sbjct: 287 FNAGTFNANP 296


>sp|PYRH_NATPD|URIDYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VADAFNGNP 10
+ADA +G+P
Sbjct: 210 IADAVDGDP 218


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FVADAFNGN 9
+AD+F+GN
Sbjct: 101 LLADSFSGN 109


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 1 FVADAFNGN 9
+VA A+N N
Sbjct: 178 YVAQAYNSN 186


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 FVADAFNGN 9
++DAF+GN
Sbjct: 98 LLSDAFSGN 106


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FVADAFNGNP 10
+ A FNG+P
Sbjct: 300 YQAGTFNGSP 309


>sp|AROA_HALLT|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 FVADAFNGNP 10
V D F+G P
Sbjct: 75 LVVDGFDGRP 84




75|SequenceR|380|371|NANFRFVADA

>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NANFRFVAD 9
NA FR +AD
Sbjct: 694 NAGFRVMAD 702


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 NANFRFVAD 9
NA FR +AD
Sbjct: 693 NAGFRVMAD 701


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 NANFRFVAD 9
NA FR +AD
Sbjct: 693 NAGFRVMAD 701


>sp|IF2B_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter

Query: 3 NFRFVADA 10
NFR VADA
Sbjct: 43 NFREVADA 50


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain SCM1)

Query: 2 ANFRFVADA 10
+NF+ VAD+
Sbjct: 263 SNFKIVADS 271


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NANFRFVAD 9
NA+F ++AD
Sbjct: 58 NADFIYIAD 66


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 NANFRFVAD 9
NA+F ++AD
Sbjct: 58 NADFIYIAD 66


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NANFRFVADA 10
N NF +ADA
Sbjct: 441 NPNFNKIADA 450




76|SequenceR|385|376|GSYSINANFR

>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 GSYSINANF 9
GSY NA+F
Sbjct: 285 GSYGFNAHF 293


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSYSINANFR 10
G YS+N FR
Sbjct: 36 GDYSVNICFR 45


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GSYSINANF 9
GSY NA+F
Sbjct: 290 GSYGFNAHF 298


>sp|Y1506_METJA|UNCHARACTERIZED protein MJ1506|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSYSINANF 9
G YSINAN
Sbjct: 264 GIYSINANL 272


>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 GSYSINANFR 10
G YS N +FR
Sbjct: 36 GDYSTNISFR 45


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GSYSINANFR 10
G YS N +FR
Sbjct: 36 GDYSTNISFR 45


>sp|SYR_METM6|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GSYSINANFR 10
G YS N +FR
Sbjct: 36 GDYSTNISFR 45


>sp|PYRB_THEVO|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma volcanium

Query: 1 GSYSINA 7
GSYSIN+
Sbjct: 244 GSYSINS 250


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GSYSINANFR 10
G YS N +FR
Sbjct: 36 GDYSTNISFR 45


>sp|CETZ3_HALVD|TUBULIN-LIKE protein CetZ3|Haloferax volcanii (strain ATCC 29605

Query: 1 GSYSINANF 9
G Y I++NF
Sbjct: 325 GDYPIDSNF 333


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 GSYSINANFR 10
G Y IN N R
Sbjct: 153 GQYEINVNDR 162




77|SequenceR|390|381|VAHLVGSYSI

>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 AHLVGSY 8
AHLVGSY
Sbjct: 446 AHLVGSY 452


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 2 AHLVGSY 8
AHLVGSY
Sbjct: 446 AHLVGSY 452


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AHLVGSYSI 10
A+L+GSYS+
Sbjct: 454 ANLIGSYSV 462


>sp|DNLI2_METMA|DNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AHLVGSYSI 10
A+L+GSY++
Sbjct: 454 ANLIGSYTV 462


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 HLVGSY 8
HL+GSY
Sbjct: 148 HLIGSY 153


>sp|RS19_SACS2|SMALL ribosomal subunit protein uS19|Saccharolobus solfataricus (strain

Query: 1 VAHLVGSYSI 10
+ H +G YSI
Sbjct: 106 IGHYLGEYSI 115


>sp|DNLI_METBU|DNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 AHLVGSYSI 10
A+L+GSY++
Sbjct: 456 ANLIGSYAL 464


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 AHLVGSYSI 10
A+L+GSY++
Sbjct: 454 ANLLGSYTV 462


>sp|FLUC1_HALMA|FLUORIDE-SPECIFIC ion channel FluC 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 VAHLVGSYSI 10
VA++VGSY++
Sbjct: 98 VANVVGSYAL 107


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 1 VAHLVGSYSI 10
V H+VG Y +
Sbjct: 178 VTHVVGKYVV 187


>sp|DNLI_THEON|DNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 AHLVGSYSI 10
AHL+GS+ +
Sbjct: 446 AHLLGSFLV 454


>sp|DNLI_THEKO|DNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 AHLVGSYSI 10
AHL+GS+ +
Sbjct: 443 AHLLGSFLV 451


>sp|DNLI_THEFM|DNA ligase|Thermococcus fumicolans

Query: 2 AHLVGSYSI 10
AHL+GS+ +
Sbjct: 443 AHLLGSFLV 451


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VAHLVGSYSI 10
VAHL+ YS+
Sbjct: 51 VAHLLSGYSV 60


>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 2 AHLVGSY 8
AHL+GS+
Sbjct: 443 AHLLGSF 449


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 AHLVGSY 8
AHL+GS+
Sbjct: 443 AHLLGSF 449


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 1 VAHLVGSY 8
+ HL+G Y
Sbjct: 176 ITHLIGKY 183


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VAHLVGSY 8
V H+ GSY
Sbjct: 57 VCHMCGSY 64


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 3 HLVGSYSI 10
LVGSYS+
Sbjct: 167 QLVGSYSL 174


>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 1 VAHLVGSY 8
++HL+ SY
Sbjct: 483 ISHLISSY 490


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 VAHLVGSYSI 10
+AHL G Y +
Sbjct: 137 IAHLNGRYRV 146


>sp|GATD_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus vannielii (strain ATCC

Query: 1 VAHLVGSYSI 10
+ HL+G+Y +
Sbjct: 394 IMHLLGNYDL 403


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 1 VAHLVGSY 8
+AH VGSY
Sbjct: 208 MAHEVGSY 215


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 VAHLVGSYSI 10
+AHL G Y +
Sbjct: 137 IAHLNGRYRV 146




78|SequenceR|395|386|LGDQTVAHLV

>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 LGDQTVAHLV 10
+G T+AHLV
Sbjct: 49 IGKTTIAHLV 58


>sp|Y119_PYRAB|UPF0173 protein PYRAB01190|Pyrococcus abyssi (strain GE5 /

Query: 1 LGDQTVAHL 9
+GD+ VAHL
Sbjct: 116 IGDKRVAHL 124


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GDQTVAHLV 10
GDQ + HLV
Sbjct: 725 GDQALFHLV 733


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 3 DQTVAHL 9
D+T+AHL
Sbjct: 368 DETIAHL 374


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LGDQTVAHLV 10
LGD TVA +V
Sbjct: 33 LGDDTVAGVV 42


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LGDQTVAHLV 10
LGD TVA +V
Sbjct: 33 LGDDTVAGVV 42


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 2 GDQTVAHL 9
GDQ + HL
Sbjct: 47 GDQKIEHL 54


>sp|MVK_METTH|MEVALONATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LGDQTVAHL 9
LGD +AHL
Sbjct: 166 LGDLVIAHL 174


>sp|Y120_PYRHO|UPF0173 protein PH0120|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGDQTVAHL 9
LG++ VAHL
Sbjct: 116 LGEKRVAHL 124


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 1 LGDQTVAHLV 10
LGD V H V
Sbjct: 44 LGDDPVEHFV 53


>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 2 GDQTVAHL 9
GDQ V HL
Sbjct: 312 GDQNVLHL 319


>sp|URED_HALMA|UREASE accessory protein UreD|Haloarcula marismortui (strain ATCC 43049

Query: 1 LGDQTVAHL 9
+GD+ VAH+
Sbjct: 92 VGDEAVAHV 100


>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 3 DQTVAHL 9
D+T+AHL
Sbjct: 353 DETLAHL 359


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 3 DQTVAHL 9
D T+AHL
Sbjct: 368 DDTIAHL 374


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 3 DQTVAHL 9
D T+AHL
Sbjct: 356 DNTIAHL 362


>sp|LEUC_HALMA|3-ISOPROPYLMALATE dehydratase large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 GDQTVAHLV 10
GDQ + H++
Sbjct: 104 GDQGIVHVI 112


>sp|ENO_METLZ|ENOLASE labreanum (strain ATCC 43576

Query: 3 DQTVAHL 9
D T+AHL
Sbjct: 361 DNTIAHL 367


>sp|DPS_HALSA|DNA protection during starvation protein|Halobacterium salinarum

Query: 1 LGDQTVAHLV 10
LGD AH++
Sbjct: 143 LGDHATAHML 152




79|SequenceR|400|391|KNESFLGDQT

>sp|Y978_META3|UPF0285 protein Maeo_0978|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KNESFLGD 8
KN+SFLG+
Sbjct: 36 KNKSFLGE 43


>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 ESFLGDQ 9
+SFLGD+
Sbjct: 336 DSFLGDE 342




80|SequenceR|405|396|NILKEKNESF

>sp|DHYS2_METAC|PROBABLE deoxyhypusine synthase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 NILKEKNES 9
N+LKEKN +
Sbjct: 47 NMLKEKNTT 55


>sp|Y547_METJA|UNCHARACTERIZED ATP-binding protein MJ0547|Methanocaldococcus jannaschii (strain

Query: 3 LKEKNESF 10
LK+K ESF
Sbjct: 245 LKKKKESF 252


>sp|RNH2_METHJ|RIBONUCLEASE HII|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NILKEKNES 9
N+L +KN+S
Sbjct: 199 NLLHQKNQS 207


>sp|Y1374_METJA|UNCHARACTERIZED protein MJ1374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NILKEKNE 8
NI+++KNE
Sbjct: 185 NIVRKKNE 192


>sp|RLME_METVS|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus vannielii

Query: 1 NILKEKN 7
NI+KEKN
Sbjct: 42 NIIKEKN 48


>sp|Y500_METJA|UNCHARACTERIZED protein MJ0500|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NILKEKNESF 10
N+L EK E F
Sbjct: 15 NLLSEKEEDF 24




81|SequenceR|410|401|ATIANNILKE

>sp|WECB_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 2 TIANNILKE 10
T ANNILKE
Sbjct: 148 TAANNILKE 156


>sp|Y828_METJA|UNCHARACTERIZED protein MJ0828|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IANNILKE 10
+ANN+LK+
Sbjct: 35 VANNVLKD 42


>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 3 IANNILKE 10
IANNIL++
Sbjct: 6 IANNILRK 13


>sp|EF1A_CENSY|ELONGATION factor 1-alpha|Cenarchaeum symbiosum (strain A)

Query: 1 ATIANNILKE 10
ATIA I+KE
Sbjct: 420 ATIAAGIVKE 429


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 2 TIANNILK 9
T+A NILK
Sbjct: 544 TLAENILK 551




82|SequenceR|415|406|EQSLLATIAN

***** No hits found ******


83|SequenceR|420|411|AVVDGEQSLL

>sp|OTC_META3|ORNITHINE carbamoyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VVDGEQSLL 10
V+DGEQS++
Sbjct: 275 VIDGEQSVV 283


>sp|DPCKG_CALMQ|GTP-DEPENDENT dephospho-CoA kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VVDGEQSLL 10
+VDGE+ LL
Sbjct: 127 IVDGEEDLL 135


>sp|DPCKG_SULTO|GTP-DEPENDENT dephospho-CoA kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VVDGEQSLL 10
+VDGE+ LL
Sbjct: 106 LVDGEEDLL 114


>sp|DPCKG_SULAC|GTP-DEPENDENT dephospho-CoA kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VVDGEQSLL 10
+VDGE+ LL
Sbjct: 108 MVDGEEDLL 116


>sp|DPCKG_PYRAB|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 VVDGEQSL 9
VVDGE+ L
Sbjct: 121 VVDGEEDL 128


>sp|DPCKG_METJA|GTP-DEPENDENT dephospho-CoA kinase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VVDGEQSLL 10
+VDGE+ LL
Sbjct: 104 LVDGEEDLL 112


>sp|DPCKG_KORCO|GTP-DEPENDENT dephospho-CoA kinase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 VVDGEQSLL 10
+VDGE+ LL
Sbjct: 112 IVDGEEDLL 120


>sp|Y3680_PYRAE|UPF0282 protein PAE3680|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AVVDGEQSL 9
AV+DGE+ L
Sbjct: 171 AVLDGEERL 179


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 2 VVDGEQSLL 10
VVD EQSL+
Sbjct: 162 VVDYEQSLV 170


>sp|RL4_METBU|LARGE ribosomal subunit protein uL4|Methanococcoides burtonii (strain DSM

Query: 2 VVDGEQSLL 10
+V GE+SLL
Sbjct: 197 IVTGEESLL 205


>sp|F16A1_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 4 DGEQSLL 10
DG+QSLL
Sbjct: 256 DGDQSLL 262


>sp|OTC_METJA|ORNITHINE carbamoyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VVDGEQSLL 10
V+DGE S++
Sbjct: 275 VIDGEHSVV 283


>sp|DPCKG_HALWD|GTP-DEPENDENT dephospho-CoA kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VVDGEQSL 9
VVDGE+ L
Sbjct: 115 VVDGEEDL 122


>sp|DPCKG_NATPD|GTP-DEPENDENT dephospho-CoA kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VVDGEQSL 9
VVDGE+ L
Sbjct: 115 VVDGEEDL 122


>sp|RL22_NATPD|LARGE ribosomal subunit protein uL22|Natronomonas pharaonis (strain

Query: 1 AVVDGEQSL 9
AV+DG++S+
Sbjct: 50 AVIDGDRSV 58


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 AVVDGEQ 7
VVDGEQ
Sbjct: 205 TVVDGEQ 211




84|SequenceR|425|416|LEANSAVVDG

>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 LEANSAVVDG 10
++AN A+V+G
Sbjct: 304 IKANEAIVEG 313


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 1 LEANSAVVDG 10
++AN A++DG
Sbjct: 233 IKANEAIMDG 242


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 1 LEANSAVVDG 10
++AN A++DG
Sbjct: 233 IKANEAIMDG 242


>sp|ARGJ_METVS|GLUTAMATE N-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 4 NSAVVDG 10
N+AVVDG
Sbjct: 218 NNAVVDG 224


>sp|ARGJ_METM5|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C5 /

Query: 4 NSAVVDG 10
N+AVVDG
Sbjct: 218 NNAVVDG 224


>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 4 NSAVVDG 10
N+AVVDG
Sbjct: 218 NNAVVDG 224


>sp|ARGJ_METM6|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C6 /

Query: 4 NSAVVDG 10
N+AVVDG
Sbjct: 218 NNAVVDG 224




85|SequenceR|430|421|QFQSELEANS

>sp|RS8_METS3|SMALL ribosomal subunit protein uS8|Methanobrevibacter smithii (strain

Query: 1 QFQSELEAN 9
QF+ ELE N
Sbjct: 60 QFKVELEGN 68


>sp|PDXT_META3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus aeolicus (strain

Query: 2 FQSELEAN 9
F+SELE N
Sbjct: 111 FESELELN 118




86|SequenceR|435|426|LRRVAQFQSE

>sp|XACI_HALVD|XYLOSE/ARABINOSE import permease protein XacI|Haloferax volcanii (strain ATCC

Query: 1 LRRVAQF 7
LRRVAQ+
Sbjct: 21 LRRVAQY 27


>sp|RL37A_HALMA|LARGE ribosomal subunit protein eL43|Haloarcula marismortui (strain

Query: 2 RRVAQFQSE 10
RRVA+ +SE
Sbjct: 24 RRVAEIESE 32




87|SequenceR|440|431|AKSAVLRRVA

>sp|Y114_METTH|UNCHARACTERIZED protein MTH_114|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AKSAVLRR 8
AKSA LRR
Sbjct: 225 AKSAFLRR 232




88|SequenceR|445|436|FALFGAKSAV

>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 1 FALFGAKS 8
FALFGA S
Sbjct: 47 FALFGAGS 54


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FALFGAKSAV 10
FALFG S V
Sbjct: 313 FALFGGASNV 322


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 FALFGAKSAV 10
+A FG KSA+
Sbjct: 61 YAQFGMKSAI 70


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 1 FALFGAKS 8
FAL+G+K+
Sbjct: 45 FALYGSKA 52


>sp|Y340_METJA|UNCHARACTERIZED protein MJ0340|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FALFGAKSAV 10
A FGAKS V
Sbjct: 19 LAYFGAKSQV 28


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 1 FALFGAKSAV 10
+LFGAK A+
Sbjct: 141 LSLFGAKIAI 150




89|SequenceR|450|441|KPLQTFALFG

>sp|AATK_METJA|A-TYPE ATP synthase subunit K|Methanocaldococcus jannaschii (strain ATCC

Query: 4 QTFALFG 10
+TFA+FG
Sbjct: 202 ETFAIFG 208




90|SequenceR|455|446|LRERFKPLQT

>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LRERFKPLQ 9
L++RFKP++
Sbjct: 358 LKDRFKPVK 366


>sp|FPOI_METMA|F(420)H(2) dehydrogenase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LRERFKPLQT 10
L ERF+ LQT
Sbjct: 70 LSERFRGLQT 79


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LRERFK 6
LRERFK
Sbjct: 55 LRERFK 60


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 1 LRERFKPL 8
L+E+F+PL
Sbjct: 4 LKEKFEPL 11


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LRERFKPL 8
LRER KP+
Sbjct: 137 LRERVKPV 144


>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 1 LRERFKPLQT 10
L+E+FK ++T
Sbjct: 270 LKEKFKDIRT 279


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 1 LRERFKPLQT 10
+RE+F+P+ T
Sbjct: 78 MREKFEPVLT 87


>sp|RS12_SULAC|SMALL ribosomal subunit protein uS12|Sulfolobus acidocaldarius (strain

Query: 1 LRERFKPLQ 9
L+E+F PL+
Sbjct: 37 LKEKFDPLE 45


>sp|RS12_SULTO|SMALL ribosomal subunit protein uS12|Sulfurisphaera tokodaii (strain

Query: 1 LRERFKPLQ 9
L+E+F PL+
Sbjct: 37 LKEKFDPLE 45




91|SequenceR|460|451|VVKVGLRERF

>sp|QUEC_THEVO|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 KVGLRERF 10
K+GL+E+F
Sbjct: 151 KIGLKEKF 158


>sp|Y2518_PYRAE|UPF0248 protein PAE2518|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VVKVGLRERF 10
V++VG +ER+
Sbjct: 45 VIRVGSQERY 54




92|SequenceR|465|456|RKLAKVVKVG

>sp|Y3533_METJA|UNCHARACTERIZED protein MJECL33|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKLAKVVKVG 10
+KL++++K G
Sbjct: 62 KKLSRIIKTG 71


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RKLAKVVKVG 10
R+L KV++VG
Sbjct: 43 RRLGKVLEVG 52


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RKLAKVVKVG 10
RK+A+ VK G
Sbjct: 51 RKIAEAVKAG 60




93|SequenceR|470|461|IGNNSRKLAK

>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 3 NNSRKLAK 10
NN+RKLA+
Sbjct: 287 NNARKLAE 294


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IGNNSRKLA 9
IG N RK+A
Sbjct: 126 IGRNRRKMA 134


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 1 IGNNSRKLAK 10
IG++ RKL K
Sbjct: 306 IGSDERKLEK 315


>sp|ACTH_THEVO|ARCHAEAL actin homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IGNNSRKLAK 10
I N SRK+AK
Sbjct: 210 ISNLSRKIAK 219


>sp|MOBA_PYRHO|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus horikoshii

Query: 3 NNSRKLA 9
NNSRK+A
Sbjct: 111 NNSRKIA 117




94|SequenceR|475|466|VAAHIIGNNS

>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 VAAHIIGNN 9
+ AHII NN
Sbjct: 583 IEAHIINNN 591


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 2 AAHIIGNN 9
A+HIIG N
Sbjct: 418 ASHIIGKN 425


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 AAHIIGNN 9
AAHIIG +
Sbjct: 753 AAHIIGGS 760


>sp|Y144_METJA|UNCHARACTERIZED protein MJ0144|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 IIGNNS 10
IIGNNS
Sbjct: 214 IIGNNS 219


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 AAHIIGNNS 10
A I+GNNS
Sbjct: 417 AKKILGNNS 425


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 VAAHIIGNN 9
+ HII NN
Sbjct: 580 IETHIINNN 588


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 VAAHIIGNN 9
+ HII NN
Sbjct: 581 IETHIINNN 589


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 VAAHIIGNN 9
+ HII NN
Sbjct: 580 IETHIINNN 588


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 VAAHIIGNN 9
+ AH++ NN
Sbjct: 598 IDAHVVNNN 606


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 1 VAAHIIGNN 9
V HI+ NN
Sbjct: 570 VEVHIVNNN 578


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 1 VAAHIIGNN 9
V HI+ NN
Sbjct: 570 VEVHIVNNN 578




95|SequenceR|480|471|ACLMDVAAHI

>sp|DPHB_META3|DIPHTHINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CLMDVAAH 9
CL+D+ AH
Sbjct: 162 CLLDIQAH 169


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 ACLMDVAAH 9
ACL+ AAH
Sbjct: 108 ACLIGTAAH 116


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ACLMDVAAH 9
C+M V AH
Sbjct: 334 GCVMSVPAH 342


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ACLMDVAAH 9
C+M V AH
Sbjct: 337 GCVMSVPAH 345


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ACLMDVAAH 9
C+M V AH
Sbjct: 322 GCVMSVPAH 330


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ACLMDVAAH 9
C+M V AH
Sbjct: 342 GCVMSVPAH 350


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 4 MDVAAHI 10
+D+AAHI
Sbjct: 24 IDIAAHI 30




96|SequenceR|485|476|MPCMLACLMD

>sp|Y949_METJA|UNCHARACTERIZED protein MJ0949|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PCMLACL 8
PC ACL
Sbjct: 55 PCKTACL 61


>sp|THIM1_METST|HYDROXYETHYLTHIAZOLE kinase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 CMLACLM 9
CML C++
Sbjct: 213 CMLGCVL 219


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 CMLAC 7
CMLAC
Sbjct: 422 CMLAC 426


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 CMLAC 7
CMLAC
Sbjct: 422 CMLAC 426




97|SequenceR|490|481|DYDDHMPCML

>sp|GCH3_METST|GTP cyclohydrolase III|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DYDDHM 6
DYDDH+
Sbjct: 65 DYDDHL 70


>sp|KHSE_METKA|HOMOSERINE kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 YDDHMPCML 10
YD+ PC+L
Sbjct: 133 YDNVAPCLL 141


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 2 YDDHMPCML 10
+DDHM ML
Sbjct: 287 FDDHMGDML 295


>sp|Y1471_METJA|UNCHARACTERIZED protein MJ1471|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DYDDHMPCML 10
+YD HMP L
Sbjct: 153 NYDIHMPVYL 162


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DHMPC 8
DH PC
Sbjct: 126 DHFPC 130


>sp|TRPF_METTH|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DYDDHMPC 8
D DH+PC
Sbjct: 126 DVLDHIPC 133


>sp|CBID_SACI7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DYDDHMPCML 10
DY +H+ C L
Sbjct: 181 DYLEHIKCEL 190


>sp|CBID_SACI6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DYDDHMPCML 10
DY +H+ C L
Sbjct: 181 DYLEHIKCEL 190


>sp|CBID_SACI4|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DYDDHMPCML 10
DY +H+ C L
Sbjct: 181 DYLEHIKCEL 190


>sp|CBID_SACI3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 DYDDHMPCML 10
DY +H+ C L
Sbjct: 181 DYLEHIKCEL 190


>sp|CBID_SACI2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DYDDHMPCML 10
DY +H+ C L
Sbjct: 181 DYLEHIKCEL 190


>sp|CBID_SACI1|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DYDDHMPCML 10
DY +H+ C L
Sbjct: 181 DYLEHIKCEL 190


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 3 DDHMPCML 10
DD PC+L
Sbjct: 220 DDSKPCIL 227


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 4 DHMPCML 10
+HMP ML
Sbjct: 209 EHMPIML 215


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 4 DHMPCML 10
+HMP ML
Sbjct: 207 EHMPIML 213




98|SequenceR|495|486|QEQRLDYDDH

>sp|Y788_ARCFU|UNCHARACTERIZED transporter AF_0788|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RLDYDDH 10
R+DYDD+
Sbjct: 9 RVDYDDN 15


>sp|GLPK_THEGJ|GLYCEROL kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 QRLDYDD 9
+RLD+DD
Sbjct: 190 KRLDWDD 196


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EQRLDYD 8
E+RL+YD
Sbjct: 372 EERLNYD 378


>sp|THIOL_METTL|ACETYL-COA acetyltransferase|Methanothermococcus thermolithotrophicus

Query: 4 RLDYDD 9
R+DYDD
Sbjct: 316 RIDYDD 321


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QEQRLDYDD 9
Q +LDYDD
Sbjct: 390 QISKLDYDD 398


>sp|GCH3_METST|GTP cyclohydrolase III|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 LDYDDH 10
+DYDDH
Sbjct: 64 MDYDDH 69


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 4 RLDYDDH 10
RLD DDH
Sbjct: 209 RLDPDDH 215




99|SequenceR|500|491|SAKNLQEQRL

***** No hits found ******


100|SequenceR|505|496|KSSLLSAKNL

***** No hits found ******


101|SequenceR|510|501|NELFKKSSLL

>sp|STOPP_PYRHO|MEMBRANE-BOUND protease PH1510|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NELFKKSS 8
NEL KKS+
Sbjct: 190 NELLKKSN 197




102|SequenceR|515|506|FKELLNELFK

>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 1 FKELLNELFK 10
KELL+E+FK
Sbjct: 116 LKELLSEIFK 125


>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 2 KELLNELF 9
KE+LNELF
Sbjct: 184 KEILNELF 191


>sp|Y1314_THEON|UPF0173 metal-dependent hydrolase TON_1314|Thermococcus onnurineus (strain

Query: 3 ELLNELF 9
ELLNEL+
Sbjct: 146 ELLNELY 152


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FKELLNELFK 10
++E+LNEL++
Sbjct: 1197 YQEVLNELYE 1206


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FKELLNELFK 10
FK++ NEL K
Sbjct: 39 FKQISNELIK 48


>sp|TRPD_PYRAB|ANTHRANILATE phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 FKELLNE 7
FKEL+NE
Sbjct: 20 FKELMNE 26


>sp|RFCS_METLZ|REPLICATION factor C small subunit|Methanocorpusculum labreanum (strain ATCC

Query: 3 ELLNELFK 10
ELLN+L++
Sbjct: 264 ELLNQLYR 271


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KELLNELFK 10
KEL++ LFK
Sbjct: 119 KELVDTLFK 127


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC

Query: 3 ELLNELFK 10
ELL++LFK
Sbjct: 74 ELLSKLFK 81


>sp|TF2B2_THEKO|TRANSCRIPTION initiation factor IIB 2|Thermococcus kodakarensis (strain ATCC

Query: 2 KELLNELFK 10
KE+LNE K
Sbjct: 237 KEILNEAIK 245


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 FKELLNELF 9
F+E++NEL
Sbjct: 725 FREVINELL 733


>sp|Y1076_METJA|UNCHARACTERIZED ATP-binding protein MJ1076|Methanocaldococcus jannaschii (strain

Query: 2 KELLNELF 9
K LLNELF
Sbjct: 148 KSLLNELF 155


>sp|THI4_PYRFU|THIAMINE thiazole synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FKELLNEL 8
FK+LLN L
Sbjct: 16 FKDLLNNL 23


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus jannaschii

Query: 3 ELLNELF 9
E+LNELF
Sbjct: 133 EILNELF 139


>sp|RFHPS_METJA|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KELLNELFK 10
K+L+NEL K
Sbjct: 268 KDLINELHK 276


>sp|Y3526_METJA|UNCHARACTERIZED ATP-binding protein MJECL26|Methanocaldococcus jannaschii (strain

Query: 2 KELLNELF 9
K LLNELF
Sbjct: 152 KSLLNELF 159


>sp|Y625_METJA|UNCHARACTERIZED ATP-binding protein MJ0625|Methanocaldococcus jannaschii (strain

Query: 2 KELLNELF 9
K LLNELF
Sbjct: 148 KSLLNELF 155


>sp|Y1006_METJA|UNCHARACTERIZED ATP-binding protein MJ1006|Methanocaldococcus jannaschii (strain

Query: 2 KELLNELF 9
K LLNELF
Sbjct: 170 KSLLNELF 177


>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii (strain

Query: 1 FKELLNELF 9
+KE LNEL+
Sbjct: 392 YKEHLNELY 400


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FKELLNELFK 10
F+EL+N + K
Sbjct: 163 FRELINRIVK 172


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 3 ELLNELFK 10
EL+ ELFK
Sbjct: 137 ELIGELFK 144


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KELLNEL 8
KELLNE+
Sbjct: 386 KELLNEI 392


>sp|Y819_METJA|PUTATIVE uncharacterized protein MJ0819|Methanocaldococcus jannaschii

Query: 1 FKELLNELFK 10
KE+L+E+F+
Sbjct: 20 LKEILDEMFR 29


>sp|CBID_METVS|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KELLNELF 9
K++LNE+F
Sbjct: 320 KDILNEVF 327




103|SequenceR|520|511|DVHSNFKELL

>sp|SYFA_METHJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DVHSNFKELL 10
D H NF+ LL
Sbjct: 364 DTHVNFRNLL 373


>sp|NADK_METB6|NAD kinase|Methanoregula boonei (strain DSM 21154

Query: 1 DVHSNFKE 8
DVH NF E
Sbjct: 254 DVHRNFFE 261


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 1 DVHSNFKE 8
DVH +F+E
Sbjct: 58 DVHVHFRE 65


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 1 DVHSNFKE 8
DVH +F+E
Sbjct: 58 DVHVHFRE 65


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HSNFKELL 10
H NFKE+
Sbjct: 650 HENFKEIF 657


>sp|GUAAA_THEKO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermococcus

Query: 1 DVHSNFKEL 9
D++ NF EL
Sbjct: 176 DIYRNFAEL 184


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 2 VHSNFKELL 10
VHS++KE L
Sbjct: 771 VHSSYKEGL 779


>sp|Y321_METJA|UNCHARACTERIZED protein MJ0321|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVHSNFKELL 10
D++SN KE+
Sbjct: 83 DIYSNNKEIF 92


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 2 VHSNFKE 8
VHS++KE
Sbjct: 770 VHSSYKE 776


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DVHSNFKEL 9
D+H KEL
Sbjct: 673 DIHKEIKEL 681




104|SequenceR|525|516|AGTGHDVHSN

>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AGTGHDVHS 9
+GTG+ +HS
Sbjct: 151 SGTGYKIHS 159


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM 6242

Query: 1 AGTGHDVHSN 10
+G+G +VHSN
Sbjct: 173 SGSGLEVHSN 182


>sp|RL1_NATPD|LARGE ribosomal subunit protein uL1|Natronomonas pharaonis (strain ATCC

Query: 1 AGTGHDVH 8
+GTG D H
Sbjct: 51 SGTGQDTH 58


>sp|THI4_METTP|THIAMINE thiazole synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GTGHD 6
GTGHD
Sbjct: 168 GTGHD 172


>sp|THI4_METMA|THIAMINE thiazole synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GTGHD 6
GTGHD
Sbjct: 168 GTGHD 172


>sp|COBQ_PICTO|PROBABLE cobyric acid synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 AGTGHDVH 8
+GTG+++H
Sbjct: 377 SGTGYEIH 384


>sp|RUXX_METMA|PUTATIVE snRNP Sm-like protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GHDVHSN 10
G+D+H N
Sbjct: 33 GYDIHMN 39


>sp|RUXX_ARCFU|PUTATIVE snRNP Sm-like protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GHDVHSN 10
G+D+H N
Sbjct: 33 GYDIHMN 39


>sp|RUXX_METBU|PUTATIVE snRNP Sm-like protein|Methanococcoides burtonii (strain DSM 6242

Query: 4 GHDVHSN 10
G+DVH N
Sbjct: 33 GYDVHMN 39


>sp|RUXX_METBF|PUTATIVE snRNP Sm-like protein|Methanosarcina barkeri (strain Fusaro /

Query: 4 GHDVHSN 10
G+D+H N
Sbjct: 33 GYDIHMN 39


>sp|RUXX_METAC|PUTATIVE snRNP Sm-like protein|Methanosarcina acetivorans (strain ATCC

Query: 4 GHDVHSN 10
G+D+H N
Sbjct: 33 GYDIHMN 39


>sp|CAS7_HALVD|CRISPR-ASSOCIATED protein Cas7|Haloferax volcanii (strain ATCC 29605

Query: 4 GHDVH 8
GHDVH
Sbjct: 325 GHDVH 329




105|SequenceR|530|521|SSIVLAGTGH

>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC

Query: 3 IVLAGTG 9
I+LAGTG
Sbjct: 3 IILAGTG 9


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 2 SIVLAGTGH 10
+IVLA GH
Sbjct: 279 NIVLANAGH 287


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 2 SIVLAGTGH 10
+IVLA GH
Sbjct: 279 NIVLANAGH 287


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SIVLAGTGH 10
++ LAGTG+
Sbjct: 470 AVALAGTGY 478


>sp|PELO_METAC|PROTEIN pelota homolog|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SSIVLAGTG 9
+SIV+AG G
Sbjct: 191 ASIVIAGPG 199


>sp|PELO_METBF|PROTEIN pelota homolog|Methanosarcina barkeri (strain Fusaro /

Query: 1 SSIVLAGTG 9
+SIV+AG G
Sbjct: 191 ASIVIAGPG 199


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 3 IVLAGTGH 10
I+L G GH
Sbjct: 218 IILGGPGH 225


>sp|PELO_METMA|PROTEIN pelota homolog|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SSIVLAGTG 9
+SIV+AG G
Sbjct: 191 ASIVIAGPG 199


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SIVLAGTG 9
SIV+AG+G
Sbjct: 122 SIVVAGSG 129




106|SequenceR|535|526|LFDLLSSIVL

***** No hits found ******


107|SequenceR|540|531|CLAFTLFDLL

>sp|FAU1_PYRCJ|PROBABLE ribonuclease FAU-1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CLAFTLFD 8
CLA LFD
Sbjct: 232 CLALALFD 239


>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 CLAFTLFD 8
CLA LFD
Sbjct: 232 CLAVVLFD 239


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 CLAFTLFDLL 10
CLA+ L DL+
Sbjct: 344 CLAYMLGDLI 353


>sp|CHED2_METMA|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina mazei

Query: 1 CLAFTLFD 8
CL TL+D
Sbjct: 31 CLGITLYD 38


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 CLAFTLFD 8
C+A LFD
Sbjct: 233 CIAVVLFD 240




108|SequenceR|545|536|ESYPACLAFT

>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ESYPACLAFT 10
+S+P+C+AFT
Sbjct: 41 KSFPSCVAFT 50


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 3 YPACLAF 9
YP+C+AF
Sbjct: 24 YPSCMAF 30


>sp|PRDPP_METMA|PRENYL-DIPHOSPHATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ESYPACLA 8
ESY AC+A
Sbjct: 68 ESYEACIA 75


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 4 PACLAFT 10
PAC AFT
Sbjct: 629 PACGAFT 635




109|SequenceR|550|541|QGETTESYPA

>sp|ENDA_METBF|TRNA-SPLICING endonuclease|Methanosarcina barkeri (strain Fusaro /

Query: 1 QGETTESYPA 10
+GE TE YPA
Sbjct: 167 KGEMTEPYPA 176


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 1 QGETTESY 8
+GET+E Y
Sbjct: 92 KGETSEEY 99


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QGETTESYP 9
QGE E YP
Sbjct: 167 QGEMPEPYP 175


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 1 QGETTESYP 9
+G+T E YP
Sbjct: 210 RGDTVEVYP 218


>sp|UREG_NATPD|UREASE accessory protein UreG|Natronomonas pharaonis (strain ATCC 35678

Query: 3 ETTESYP 9
E TESYP
Sbjct: 92 EFTESYP 98


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QGETTESYP 9
+G+T E YP
Sbjct: 209 RGDTVEIYP 217


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 1 QGETTESYPA 10
+G+T E +PA
Sbjct: 195 KGDTIEVFPA 204




110|SequenceR|555|546|LMDFQQGETT

***** No hits found ******


111|SequenceR|560|551|AVMELLMDFQ

>sp|TRPD_METB6|ANTHRANILATE phosphoribosyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 AVMELLMDFQ 10
AVM ++MD Q
Sbjct: 23 AVMNMMMDGQ 32


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 1 AVMELLMD 8
A ME+LMD
Sbjct: 32 ATMEVLMD 39


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 1 AVMELLMD 8
A ME+LMD
Sbjct: 32 ATMEVLMD 39


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AVMELLMD 8
A ME+LMD
Sbjct: 32 ATMEVLMD 39


>sp|K6PF_THELI|ADP-SPECIFIC phosphofructokinase|Thermococcus litoralis

Query: 2 VMELLMDFQ 10
+ME L DFQ
Sbjct: 1 MMEFLKDFQ 9




112|SequenceR|565|556|TRGNSAVMEL

>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 TRGNSAV 7
TRGN+AV
Sbjct: 51 TRGNAAV 57


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 1 TRGNSAV 7
TRGN+AV
Sbjct: 55 TRGNAAV 61


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 TRGNSAV 7
TRGN+AV
Sbjct: 55 TRGNAAV 61


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 1 TRGNSAV 7
TRGN+AV
Sbjct: 50 TRGNAAV 56


>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 1 TRGNSAV 7
TRGN+AV
Sbjct: 52 TRGNAAV 58


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 1 TRGNSAV 7
TRGN+A+
Sbjct: 50 TRGNAAI 56


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 1 TRGNSAV 7
TRGN+A+
Sbjct: 52 TRGNAAI 58


>sp|RL2_IGNH4|LARGE ribosomal subunit protein uL2|Ignicoccus hospitalis (strain KIN4/I

Query: 3 GNSAVMEL 10
GNSA+++L
Sbjct: 137 GNSAIIQL 144




113|SequenceR|570|561|FLKFLTRGNS

>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FLKFLTRGN 9
F+K TRGN
Sbjct: 1011 FIKSETRGN 1019


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FLKFLTRGN 9
F+K TRGN
Sbjct: 1011 FIKSETRGN 1019




114|SequenceR|575|566|MSPHQFLKFL

>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 MSPHQFLKFL 10
M+P+ LKFL
Sbjct: 226 MNPNHVLKFL 235


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 MSPHQFLKFL 10
M+P+ LKFL
Sbjct: 226 MNPNHVLKFL 235


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 MSPHQFLKF 9
MSP QFL +
Sbjct: 147 MSPVQFLTY 155


>sp|MTAA_METBF|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri (strain Fusaro /

Query: 1 MSPHQFLKFL 10
MSP F +FL
Sbjct: 210 MSPETFKQFL 219


>sp|RS4E_KORCO|SMALL ribosomal subunit protein eS4|Korarchaeum cryptofilum (strain OPF8)

Query: 3 PHQFLKFL 10
PH+FL+ +
Sbjct: 106 PHRFLRLI 113


>sp|TMBL1_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 2 SPHQFLKFL 10
+P++FL++L
Sbjct: 141 TPYEFLEYL 149


>sp|MCRD_METVO|METHYL-COENZYME M reductase operon protein|Methanococcus voltae

Query: 3 PHQFLK 8
PH+FLK
Sbjct: 8 PHRFLK 13




115|SequenceR|580|571|GKIIAMSPHQ

>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 1 GKIIAMSP 8
GKII +SP
Sbjct: 537 GKIIGISP 544


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GKIIAMSPH 9
GK++ + PH
Sbjct: 33 GKVMGLCPH 41


>sp|KPRS_METJA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KIIAMSPHQ 10
K+I ++PH+
Sbjct: 118 KLITINPHE 126




116|SequenceR|585|576|MVLGAGKIIA

>sp|RL18E_PYRAB|LARGE ribosomal subunit protein eL18|Pyrococcus abyssi (strain GE5 /

Query: 2 VLGAGKI 8
VLGAGKI
Sbjct: 68 VLGAGKI 74


>sp|TBP_META3|TATA-BOX-BINDING protein|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 MVLGAGKII 9
+V G+GK++
Sbjct: 144 LVFGSGKVV 152


>sp|HEM1_METS3|GLUTAMYL-TRNA reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 MVLGAGKI 8
+V+GAGK+
Sbjct: 170 LVIGAGKM 177


>sp|RL18E_PYRFU|LARGE ribosomal subunit protein eL18|Pyrococcus furiosus (strain ATCC

Query: 2 VLGAGKI 8
VLGAGK+
Sbjct: 68 VLGAGKL 74


>sp|RL18E_THEON|LARGE ribosomal subunit protein eL18|Thermococcus onnurineus (strain

Query: 2 VLGAGKI 8
VLGAGK+
Sbjct: 68 VLGAGKL 74




117|SequenceR|590|581|EIIAKMVLGA

>sp|FTSZ2_THEKO|CELL division protein FtsZ 2|Thermococcus kodakarensis (strain ATCC

Query: 1 EIIAKMVLG 9
EIIA+MV G
Sbjct: 219 EIIARMVKG 227


>sp|FTSZ2_PYRHO|CELL division protein FtsZ 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EIIAKMVLG 9
EIIA+MV G
Sbjct: 217 EIIARMVKG 225


>sp|FTSZ2_PYRAB|CELL division protein FtsZ 2|Pyrococcus abyssi (strain GE5 /

Query: 1 EIIAKMVLG 9
EIIA+MV G
Sbjct: 217 EIIARMVKG 225


>sp|DNLI_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EIIAKMVLG 9
++IA++VLG
Sbjct: 163 KVIARLVLG 171


>sp|FTSZ2_PYRFU|CELL division protein FtsZ 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EIIAKMVLG 9
E+IA+MV G
Sbjct: 217 ELIARMVKG 225




118|SequenceR|595|586|EKDGEEIIAK

>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EKDGEEIIAK 10
E+D EE++ K
Sbjct: 265 ERDAEELVMK 274


>sp|KITH_PYRAE|THYMIDINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EKDGEEIIAK 10
+KDG EII K
Sbjct: 63 DKDGVEIIRK 72


>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DGEEIIA 9
DGEEI+A
Sbjct: 183 DGEEIVA 189


>sp|RS4E_NATPD|SMALL ribosomal subunit protein eS4|Natronomonas pharaonis (strain ATCC

Query: 2 KDGEEIIA 9
DGEEI+A
Sbjct: 160 NDGEEIVA 167


>sp|GATD_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus horikoshii (strain ATCC

Query: 1 EKDGEEII 8
E+DGEE+I
Sbjct: 23 EEDGEEVI 30


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 EKDGEEIIA 9
EKD EE+IA
Sbjct: 265 EKDYEELIA 273


>sp|ASPGP_PYRHO|PLANT-TYPE L-asparaginase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DGEEIIA 9
DGEEI+A
Sbjct: 182 DGEEIVA 188


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KDGEEIIA 9
KDGE I+A
Sbjct: 10 KDGERIVA 17


>sp|TR112_HALVD|METHYLTRANSFERASE activator Trm112|Haloferax volcanii (strain ATCC 29605

Query: 1 EKDGEEII 8
E+DG+EII
Sbjct: 24 ERDGDEII 31


>sp|PGK_AERPE|PHOSPHOGLYCERATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EKDGEEIIAK 10
+K GEE IAK
Sbjct: 258 KKGGEEAIAK 267


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DGEEIIAK 10
DG++IIAK
Sbjct: 198 DGDKIIAK 205


>sp|TKSU_THEKO|TK-SUBTILISIN kodakarensis (strain ATCC BAA-918

Query: 1 EKDGEEIIA 9
+KDG+ IIA
Sbjct: 236 DKDGDGIIA 244


>sp|FEOA_METJA|PUTATIVE Fe(2+) transport protein A|Methanocaldococcus jannaschii (strain

Query: 2 KDGEEIIAK 10
K+GEE+I K
Sbjct: 8 KEGEEVIVK 16


>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKDGEEIIA 9
EKDG+E++
Sbjct: 144 EKDGKEVLT 152


>sp|ASPGP_PYRAB|PLANT-TYPE L-asparaginase|Pyrococcus abyssi (strain GE5 /

Query: 3 DGEEIIA 9
DGEE++A
Sbjct: 182 DGEEVVA 188


>sp|Y1086_METJA|UNCHARACTERIZED protein MJ1086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DGEEIIAK 10
+GEEI+A+
Sbjct: 299 NGEEIVAR 306


>sp|ASPGP_THEKO|PLANT-TYPE L-asparaginase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DGEEIIA 9
DGEE++A
Sbjct: 183 DGEEVVA 189


>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 KDGEEII 8
KDGEE++
Sbjct: 109 KDGEEVL 115


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 2 KDGEEIIAK 10
KDG+++IA+
Sbjct: 341 KDGDDVIAR 349




119|SequenceR|600|591|MKTAIEKDGE

>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 MKTAIEKDGE 10
+K AIE+DG+
Sbjct: 910 LKAAIERDGK 919


>sp|NADK_METB6|NAD kinase|Methanoregula boonei (strain DSM 21154

Query: 1 MKTAIEKDG 9
MKTA+E+ G
Sbjct: 21 MKTALERAG 29


>sp|PSB1_SULAC|PROTEASOME subunit beta 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MKTAIEKD 8
MK+A+E+D
Sbjct: 164 MKSAVERD 171


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC

Query: 1 MKTAIEK 7
MKTA+EK
Sbjct: 1 MKTAVEK 7


>sp|CSG_METTL|S-LAYER protein|Methanothermococcus thermolithotrophicus

Query: 1 MKTAIEKDG 9
MK AI++DG
Sbjct: 39 MKNAIKEDG 47


>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain ATCC

Query: 1 MKTAIEKDGE 10
M IE+DGE
Sbjct: 208 MSMTIERDGE 217


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 TAIEKDGE 10
TA+EKD E
Sbjct: 42 TAVEKDDE 49


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MKTAIEKDGE 10
+K +I+KDG
Sbjct: 283 LKISIDKDGR 292




120|SequenceR|605|596|LALEQMKTAI

>sp|CBID_METKA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 LALEQMKTAI 10
LALE +KT +
Sbjct: 262 LALEAVKTGV 271


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LALEQMKTAI 10
LA+EQ+K+ I
Sbjct: 95 LAIEQLKSKI 104


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LEQMKTA 9
LE+MKTA
Sbjct: 327 LEEMKTA 333


>sp|Y1111_PYRAE|UNCHARACTERIZED protein PAE1111|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ALEQMKTAI 10
A EQM TAI
Sbjct: 135 AAEQMATAI 143




121|SequenceR|610|601|LAGESLALEQ

>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 1 LAGESLALEQ 10
+AGE++++EQ
Sbjct: 367 MAGETVSVEQ 376


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAGESLALE 9
LAGE LAL+
Sbjct: 52 LAGEQLALD 60


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 LAGESLALE 9
+AGE+LAL+
Sbjct: 51 IAGEALALD 59


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 LAGESLALE 9
+AGE+LAL+
Sbjct: 51 VAGEALALD 59


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LAGESLALE 9
+AGE+LAL+
Sbjct: 51 VAGEALALD 59


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LAGESLALE 9
+AGE+LAL+
Sbjct: 51 VAGEALALD 59


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LAGESLALE 9
+AGE+LAL+
Sbjct: 51 VAGEALALD 59


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LAGESLALE 9
+AGE+LAL+
Sbjct: 51 VAGEALALD 59


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LAGESLALE 9
+AGE+LAL+
Sbjct: 51 VAGEALALD 59


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LAGESLALE 9
+AGE+LAL+
Sbjct: 51 VAGEALALD 59


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LAGESLALE 9
+AGE+LAL+
Sbjct: 51 VAGEALALD 59


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LAGESLALE 9
+AGE+LAL+
Sbjct: 51 VAGEALALD 59


>sp|PELO_PYRIL|PROTEIN pelota homolog|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LAGESLALEQ 10
LAG S+ +EQ
Sbjct: 194 LAGPSMIIEQ 203


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LAGESLALE 9
+AGE+LAL+
Sbjct: 51 VAGEALALD 59




122|SequenceR|615|606|HLHRPLAGES

>sp|RL18_PYRNV|LARGE ribosomal subunit protein uL18|Pyrobaculum neutrophilum (strain DSM

Query: 2 LHRPLAG 8
LHRP+AG
Sbjct: 107 LHRPVAG 113


>sp|RL18_PYRIL|LARGE ribosomal subunit protein uL18|Pyrobaculum islandicum (strain DSM

Query: 2 LHRPLAG 8
LHRP+AG
Sbjct: 107 LHRPVAG 113


>sp|ASD_METTH|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanothermobacter

Query: 4 RPLAGES 10
RP+AGE+
Sbjct: 202 RPMAGET 208


>sp|TSGCD_HALVD|PUTATIVE glucose ABC transporter permease|Haloferax volcanii (strain ATCC

Query: 2 LHRPLAGES 10
+H PL GE+
Sbjct: 131 VHLPLVGEA 139


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HLHRPLAG 8
HL RP+ G
Sbjct: 7 HLRRPVRG 14


>sp|SYH_PYRCJ|HISTIDINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 HLHRPLAG 8
HL RP+ G
Sbjct: 7 HLRRPVRG 14


>sp|TRMY_ARCFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Archaeoglobus fulgidus

Query: 2 LHRPLAGES 10
+H PL G+S
Sbjct: 22 MHTPLCGDS 30




123|SequenceR|620|611|TFMATHLHRP

>sp|RS27A_METVS|SMALL ribosomal subunit protein eS31|Methanococcus vannielii (strain

Query: 2 FMATHLHR 9
FMA HL+R
Sbjct: 43 FMAEHLNR 50


>sp|RS27A_METMP|SMALL ribosomal subunit protein eS31|Methanococcus maripaludis (strain

Query: 2 FMATHLHR 9
FMA HL+R
Sbjct: 39 FMAEHLNR 46


>sp|RS27A_METM7|SMALL ribosomal subunit protein eS31|Methanococcus maripaludis (strain

Query: 2 FMATHLHR 9
FMA HL+R
Sbjct: 39 FMAEHLNR 46


>sp|RS27A_METM6|SMALL ribosomal subunit protein eS31|Methanococcus maripaludis (strain

Query: 2 FMATHLHR 9
FMA HL+R
Sbjct: 39 FMAEHLNR 46


>sp|RS27A_METM5|SMALL ribosomal subunit protein eS31|Methanococcus maripaludis (strain

Query: 2 FMATHLHR 9
FMA HL+R
Sbjct: 39 FMAEHLNR 46


>sp|RS27A_METJA|SMALL ribosomal subunit protein eS31|Methanocaldococcus jannaschii

Query: 2 FMATHLHR 9
FMA HL+R
Sbjct: 35 FMAEHLNR 42


>sp|CAS1A_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TFMATHLHRP 10
TF+A H+ P
Sbjct: 254 TFLAKHMATP 263


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 TFMATHLHRP 10
TF+ TH + P
Sbjct: 617 TFLGTHTYIP 626


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 FMATHLHRP 10
F+A + HRP
Sbjct: 463 FLADNKHRP 471


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 MATHLHRP 10
M TH H P
Sbjct: 203 MTTHRHSP 210




124|SequenceR|625|616|QDSSITFMAT

>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DSSITFMAT 10
D ITFMAT
Sbjct: 105 DGVITFMAT 113


>sp|MTD_METMJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoculleus

Query: 1 QDSSITFMAT 10
++ ITFMAT
Sbjct: 29 REDMITFMAT 38


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 1 QDSSITF 7
QD+S+TF
Sbjct: 195 QDASVTF 201




125|SequenceR|630|621|NTLMRQDSSI

>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TLMRQDSSI 10
TL+RQD S+
Sbjct: 512 TLLRQDGSL 520




126|SequenceR|635|626|RSLQRNTLMR

>sp|RL10_METKA|LARGE ribosomal subunit protein uL10|Methanopyrus kandleri (strain AV19

Query: 3 LQRNTLMR 10
+ RNTLMR
Sbjct: 67 MSRNTLMR 74




127|SequenceR|640|631|LGVLHRSLQR

>sp|GLNA_PYRHO|GLUTAMINE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GVLHRSLQR 10
GVL R+L+R
Sbjct: 105 GVLRRTLER 113


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGVLHRSL 8
LGV+HR++
Sbjct: 73 LGVIHRNM 80


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGVLHRSL 8
LGV+HR++
Sbjct: 73 LGVIHRNM 80


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 LGVLHRSL 8
LGV+HR++
Sbjct: 73 LGVIHRNM 80


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGVLHRSL 8
LGV+HR++
Sbjct: 70 LGVIHRNM 77


>sp|IMDH_KORCO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LGVLHRS 7
LG+LHR+
Sbjct: 67 LGILHRN 73


>sp|RUXX_THEGJ|PUTATIVE snRNP Sm-like protein|Thermococcus gammatolerans (strain DSM

Query: 1 LGVLHRSLQR 10
L V+HRSL +
Sbjct: 6 LDVIHRSLDK 15


>sp|Y367_PYRAB|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus abyssi

Query: 1 LGVLHRSLQR 10
LGV +SLQR
Sbjct: 149 LGVSRKSLQR 158


>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 LGVLHRSLQR 10
LG+ +RSL R
Sbjct: 272 LGLAYRSLSR 281


>sp|NOB1_ARCFU|ENDORIBONUCLEASE Nob1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GVLHRSLQR 10
G+LHR + +
Sbjct: 117 GILHRQISK 125


>sp|RUXX_THEON|PUTATIVE snRNP Sm-like protein|Thermococcus onnurineus (strain NA1)

Query: 1 LGVLHRSLQR 10
L V+HRSL +
Sbjct: 6 LDVIHRSLDK 15


>sp|Y154_ARCFU|UNCHARACTERIZED protein AF_0154|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGVLHRSLQR 10
LG++HRS R
Sbjct: 261 LGLIHRSYGR 270


>sp|IMDH_HALSA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LGVLHRSL 8
LGVLH+++
Sbjct: 79 LGVLHQNM 86


>sp|IMDH_THEAC|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LGVLHRSLQR 10
+GV+HR+ R
Sbjct: 71 IGVIHRNQPR 80


>sp|RUXX_PYRHO|PUTATIVE snRNP Sm-like protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGVLHRSLQR 10
L V+HRSL +
Sbjct: 6 LDVIHRSLDK 15


>sp|Y1808_PYRHO|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus horikoshii

Query: 1 LGVLHRSLQR 10
LG+ +SLQR
Sbjct: 149 LGISRKSLQR 158


>sp|RUXX_PYRAB|PUTATIVE snRNP Sm-like protein|Pyrococcus abyssi (strain GE5 /

Query: 1 LGVLHRSLQR 10
L V+HRSL +
Sbjct: 6 LDVIHRSLDK 15




128|SequenceR|645|636|NDATWLGVLH

>sp|COFD_METKA|2-PHOSPHO-L-LACTATE transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 NDATWLGV 8
ND TW G+
Sbjct: 61 NDETWYGI 68


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 NDATWLGV 8
ND WLG+
Sbjct: 145 NDLKWLGI 152


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 NDATWLGVL 9
NDA W GV
Sbjct: 353 NDAYWHGVF 361


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 1 NDATWLGVL 9
NDA W GV
Sbjct: 353 NDAYWHGVF 361


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 2 DATWLG 7
DA+WLG
Sbjct: 94 DASWLG 99


>sp|COFD_METVS|2-PHOSPHO-L-LACTATE transferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NDATWLGV 8
ND TW G+
Sbjct: 61 NDETWYGL 68


>sp|COFD_METMP|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NDATWLGV 8
ND TW G+
Sbjct: 61 NDETWYGL 68


>sp|COFD_METM7|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C7 /

Query: 1 NDATWLGV 8
ND TW G+
Sbjct: 61 NDETWYGL 68


>sp|COFD_METM6|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C6 /

Query: 1 NDATWLGV 8
ND TW G+
Sbjct: 61 NDETWYGL 68


>sp|COFD_METM5|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C5 /

Query: 1 NDATWLGV 8
ND TW G+
Sbjct: 61 NDETWYGL 68


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 1 NDATWLGVL 9
NDA W GV
Sbjct: 353 NDAYWHGVF 361


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 NDATWLGVL 9
NDA W GV
Sbjct: 353 NDAYWHGVF 361


>sp|SDO1_METTH|RIBOSOME maturation protein SDO1 homolog|Methanothermobacter

Query: 1 NDATWLGVL 9
ND +W+ V+
Sbjct: 196 NDGSWIAVV 204


>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NDATWLGVL 9
NDA LGVL
Sbjct: 20 NDAKSLGVL 28


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NDATWLGVL 9
+D WLGV+
Sbjct: 162 DDFKWLGVV 170


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NDATWLGVL 9
+D WLGV+
Sbjct: 162 DDFKWLGVV 170


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NDATWLGVL 9
+D WLGV+
Sbjct: 162 DDFKWLGVV 170


>sp|SECY_HALVD|PROTEIN translocase subunit SecY|Haloferax volcanii (strain ATCC 29605

Query: 3 ATWLGVL 9
ATW+G++
Sbjct: 216 ATWIGII 222


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NDATWL 6
NDA WL
Sbjct: 386 NDALWL 391


>sp|HAH4_HALMT|HALOCIN-H4 mediterranei (strain ATCC 33500

Query: 1 NDATWLG 7
ND+ W+G
Sbjct: 151 NDSDWVG 157


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DATWLGV 8
D +WLG+
Sbjct: 157 DLSWLGI 163


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NDATWLG 7
ND WLG
Sbjct: 305 NDLQWLG 311


>sp|CARA_METKA|CARBAMOYL phosphate synthase small chain|Methanopyrus kandleri (strain AV19 /

Query: 1 NDATWLGVLH 10
ND T GV+H
Sbjct: 317 NDGTVEGVVH 326


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 NDATWLGVL 9
N W+GVL
Sbjct: 10 NGVYWIGVL 18




129|SequenceR|650|641|NTATANDATW

>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 5 ANDATW 10
ANDA W
Sbjct: 631 ANDAEW 636


>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 5 ANDATW 10
ANDA W
Sbjct: 631 ANDAEW 636




130|SequenceR|655|646|IRKLLNTATA

>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IRKLLNTAT 9
I+K+LN AT
Sbjct: 425 IKKMLNYAT 433




131|SequenceR|660|651|LGPPLIRKLL

>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 1 LGPPLIRKLL 10
+ PP +RKLL
Sbjct: 43 MDPPELRKLL 52


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 PPLIRKL 9
PP++RKL
Sbjct: 887 PPVMRKL 893


>sp|RNH2_METST|RIBONUCLEASE HII|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PPLIRK 8
PP+IRK
Sbjct: 194 PPIIRK 199


>sp|Y452_METAC|UNCHARACTERIZED glycosyltransferase MA_0452|Methanosarcina acetivorans (strain ATCC

Query: 2 GPPLIRKLL 10
GP IRKLL
Sbjct: 362 GPKTIRKLL 370


>sp|CBIM2_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain Fusaro

Query: 1 LGPPLIRKL 9
+G PL+RKL
Sbjct: 222 IGEPLVRKL 230


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain ATCC

Query: 2 GPPLIRKLL 10
GP +RKLL
Sbjct: 362 GPAAVRKLL 370


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGPPLIRKL 9
LGP LIR +
Sbjct: 80 LGPGLIRNI 88


>sp|LYSZ_SULTO|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LGPPLIRKLL 10
+GP + RKLL
Sbjct: 216 IGPGMNRKLL 225


>sp|LYSZ_SACI7|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LGPPLIRKLL 10
+GP + RKLL
Sbjct: 217 IGPGMNRKLL 226


>sp|LYSZ_SACI6|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LGPPLIRKLL 10
+GP + RKLL
Sbjct: 217 IGPGMNRKLL 226


>sp|LYSZ_SACI4|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LGPPLIRKLL 10
+GP + RKLL
Sbjct: 217 IGPGMNRKLL 226


>sp|LYSZ_SACI3|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LGPPLIRKLL 10
+GP + RKLL
Sbjct: 217 IGPGMNRKLL 226


>sp|LYSZ_SACI2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LGPPLIRKLL 10
+GP + RKLL
Sbjct: 217 IGPGMNRKLL 226


>sp|LYSZ_SACI1|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LGPPLIRKLL 10
+GP + RKLL
Sbjct: 217 IGPGMNRKLL 226




132|SequenceR|665|656|ELYALLGPPL

>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 ELYALLGPPL 10
E++ L+GPP+
Sbjct: 408 EIFTLIGPPI 417


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 2 LYALLGPPL 10
LY LL PPL
Sbjct: 132 LYVLLAPPL 140


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 LYALLGPPL 10
L LLGPP+
Sbjct: 175 LSTLLGPPV 183


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 LYALLGPPL 10
L LLGPP+
Sbjct: 175 LSTLLGPPV 183


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 1 ELYALLGPP 9
+LY + GPP
Sbjct: 201 DLYLIHGPP 209


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 LYALLGPPL 10
LY + GPPL
Sbjct: 369 LYEVEGPPL 377


>sp|AROE_METTP|SHIKIMATE dehydrogenase (NADP(+))|Methanothrix thermoacetophila (strain DSM

Query: 1 ELYALLGPPL 10
++YA+LG P+
Sbjct: 2 KVYAVLGDPI 11


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 ELYALLGP 8
ELY LGP
Sbjct: 189 ELYRRLGP 196


>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 3 YALLGPPL 10
YAL PPL
Sbjct: 192 YALARPPL 199


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 1 ELYALLGP 8
EL+ +LGP
Sbjct: 33 ELFGILGP 40


>sp|MAP2_ARCFU|METHIONINE aminopeptidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELYALLGP 8
E+Y+LL P
Sbjct: 205 EIYSLLNP 212


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ELYALLGPP 9
ELYA +G P
Sbjct: 80 ELYAKIGRP 88


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 1 ELYALLGPP 9
ELYA +G P
Sbjct: 69 ELYAKIGRP 77




133|SequenceR|670|661|VLDSSELYAL

>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VLDSSELYAL 10
VLDSSE +A+
Sbjct: 171 VLDSSENFAV 180


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VLDSSELYAL 10
VLDSSE +A+
Sbjct: 171 VLDSSENFAV 180




134|SequenceR|675|666|ADKEPVLDSS

>sp|RS2_NATPD|SMALL ribosomal subunit protein uS2|Natronomonas pharaonis (strain ATCC

Query: 1 ADKEPVLDSS 10
AD+EPVLD +
Sbjct: 70 ADEEPVLDEN 79


>sp|HTR6_HALS3|TRANSDUCER protein Htr6|Halobacterium salinarum (strain ATCC 29341

Query: 4 EPVLDSS 10
EPVLDS+
Sbjct: 225 EPVLDSN 231


>sp|RS4_NITMS|SMALL ribosomal subunit protein uS4|Nitrosopumilus maritimus (strain

Query: 1 ADKEPVLDSS 10
A+KEP+L S
Sbjct: 67 AEKEPILMKS 76


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DKEPVLDSS 10
DKE +LDS+
Sbjct: 467 DKEKMLDSA 475


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DKEPVLD 8
+KEPV+D
Sbjct: 66 NKEPVID 72




135|SequenceR|680|671|VHMRDADKEP

>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 1 VHMRDAD 7
+HMRDAD
Sbjct: 394 IHMRDAD 400


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VHMRDA 6
+HMRDA
Sbjct: 394 IHMRDA 399


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 VHMRDA 6
+HMRDA
Sbjct: 394 IHMRDA 399


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 VHMRDA 6
+HMRDA
Sbjct: 393 IHMRDA 398


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 1 VHMRDA 6
+HMRDA
Sbjct: 394 IHMRDA 399


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VHMRDA 6
+HMRDA
Sbjct: 394 IHMRDA 399


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VHMRDADKEP 10
+HM DA+ P
Sbjct: 276 IHMSDAEMGP 285


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VHMRDA 6
+HMRDA
Sbjct: 395 IHMRDA 400


>sp|DHQS_NATPD|3-DEHYDROQUINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VHMRDADKEP 10
VH+ DA+++P
Sbjct: 60 VHVMDAEEQP 69


>sp|SPCS_METMP|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanococcus maripaludis (strain DSM 14266

Query: 3 MRDADKEP 10
M D DK+P
Sbjct: 57 MMDTDKDP 64


>sp|DPCKG_HALLT|GTP-DEPENDENT dephospho-CoA kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 HMRDADKEP 10
+RDA KEP
Sbjct: 7 SLRDAFKEP 15


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM

Query: 3 MRDADKE 9
MRDADK+
Sbjct: 1 MRDADKQ 7


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus

Query: 3 MRDADKEP 10
+RDA+K+P
Sbjct: 47 VRDAEKDP 54




136|SequenceR|685|676|KVNDRVHMRD

>sp|HPRT_METPE|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 KVNDRVHMRD 10
+VN+RVH+ D
Sbjct: 170 EVNERVHVID 179


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 4 DRVHMRD 10
DRVH R+
Sbjct: 287 DRVHQRE 293


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KVNDRVHM 8
K+N+R+H+
Sbjct: 75 KINERLHI 82


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 1 KVNDRVHM 8
K+N+R+H+
Sbjct: 72 KINERLHV 79




137|SequenceR|690|681|QDMAIKVNDR

>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QDMAIKVNDR 10
+D +K+NDR
Sbjct: 158 RDYVVKINDR 167


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QDMAIKVND 9
QD+A+KV D
Sbjct: 222 QDLALKVKD 230


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 2 DMAIKVNDR 10
+MA+K+ DR
Sbjct: 180 EMALKIGDR 188


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 1 QDMAIKVNDR 10
+++A+K+ND+
Sbjct: 447 REIAVKLNDK 456


>sp|RL4_THEAC|LARGE ribosomal subunit protein uL4|Thermoplasma acidophilum (strain ATCC

Query: 1 QDMAIKVNDR 10
+++ +K+NDR
Sbjct: 100 KNLYVKINDR 109


>sp|ASD_METBU|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanococcoides burtonii

Query: 2 DMAIKVNDR 10
D+A KV DR
Sbjct: 182 DIACKVGDR 190




138|SequenceR|695|686|NFKGYQDMAI

>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 NFKGYQDMAI 10
NFK Y D A+
Sbjct: 10 NFKCYADAAV 19


>sp|COAD_PYRHO|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NFKGYQDMAI 10
NFKGY+ + I
Sbjct: 71 NFKGYRIIKI 80


>sp|PRNK_PYRAB|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PYRAB01840|Pyrococcus abyssi (strain GE5 /

Query: 2 FKGYQDMAI 10
KGY+D+ I
Sbjct: 172 LKGYEDITI 180


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 2 FKGYQDM 8
F GYQD+
Sbjct: 243 FSGYQDI 249


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 1 NFKGYQD 7
NFK Y+D
Sbjct: 10 NFKPYED 16


>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 KGYQDMAI 10
KGY D+AI
Sbjct: 165 KGYLDVAI 172


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KGYQDMAI 10
KGY+ MA+
Sbjct: 261 KGYKQMAL 268




139|SequenceR|700|691|WEPVKNFKGY

>sp|FENR_IGNH4|FERREDOXIN--NADP reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 WEPVKNFKGY 10
W+PV+N+ G+
Sbjct: 44 WKPVENYPGF 53


>sp|Y986_METJA|UNCHARACTERIZED protein MJ0986|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEPVKNFKG 9
WE ++NF+G
Sbjct: 33 WELIENFRG 41


>sp|Y956_METJA|UNCHARACTERIZED protein MJ0956|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEPVKNFKG 9
WE +KNF+G
Sbjct: 98 WEGIKNFEG 106


>sp|Y1521_ARCFU|ADP-RIBOSE glycohydrolase AF_1521|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EPVKNFKG 9
E VKNFKG
Sbjct: 158 EAVKNFKG 165


>sp|AROB_PYRIL|3-DEHYDROQUINATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 WEPVKNFKG 9
W PVKN G
Sbjct: 128 WGPVKNLVG 136


>sp|AROB_PYRNV|3-DEHYDROQUINATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 WEPVKNFKG 9
W PVKN G
Sbjct: 128 WGPVKNLIG 136


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 1 WEPVKNFKGY 10
++P+K FKG+
Sbjct: 170 FKPIKTFKGF 179


>sp|PDXT_METB6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoregula boonei (strain

Query: 1 WEPVKNFKG 9
++P+++FKG
Sbjct: 69 YKPIRDFKG 77


>sp|COAD_PYRHO|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 VKNFKGY 10
V NFKGY
Sbjct: 69 VNNFKGY 75


>sp|MTD_METB6|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoregula boonei

Query: 1 WEPVKNFK-GY 10
WE VKN K GY
Sbjct: 102 WEEVKNSKFGY 112


>sp|Y1613_METJA|UNCHARACTERIZED protein MJ1613|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEPVKNFKGY 10
W+ V N+K Y
Sbjct: 65 WDKVHNYKDY 74


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 1 WEPVKNFK 8
+EP KNF+
Sbjct: 307 FEPTKNFR 314


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 1 WEPVKNFK 8
+EP KNF+
Sbjct: 307 FEPTKNFR 314


>sp|RIBL_METEZ|FAD synthase|Methanohalobium evestigatum (strain ATCC BAA-1072

Query: 1 WEPVKNFK 8
+EP+KN K
Sbjct: 87 YEPIKNIK 94


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 WEPVKNFKG 9
WE V NF+G
Sbjct: 508 WEDVLNFEG 516


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WEPVKNFKG 9
WE V NF+G
Sbjct: 506 WEDVLNFEG 514


>sp|DPHB_METHJ|DIPHTHINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EPVKNFKGY 10
E +KNF GY
Sbjct: 241 EYLKNFAGY 249


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WEPVKNFKG 9
WE V NF+G
Sbjct: 493 WEDVLNFEG 501


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEPVKNFKG 9
WE V NF+G
Sbjct: 493 WEDVLNFEG 501


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain

Query: 1 WEPVKNFKG 9
W P++NF G
Sbjct: 89 WRPMENFLG 97


>sp|GCH1L_METJA|GTP cyclohydrolase 1 type 2|Methanocaldococcus jannaschii (strain

Query: 2 EPVKNFKG 9
+P++NF G
Sbjct: 71 DPIRNFTG 78


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 WEPVKNFKG 9
WE V NF+G
Sbjct: 493 WEDVLNFEG 501


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WEPVKNFKGY 10
+EPV+ K Y
Sbjct: 4 YEPVRGMKDY 13


>sp|PDXT_METMJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoculleus marisnigri

Query: 1 WEPVKNFKG 9
+EPV F+G
Sbjct: 68 YEPVAEFEG 76


>sp|Y290_METJA|UNCHARACTERIZED protein MJ0290|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEPVKNFKGY 10
W+ +N+ GY
Sbjct: 164 WKTFRNYIGY 173


>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 3 PVKNFK 8
PVKNF+
Sbjct: 248 PVKNFR 253


>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 3 PVKNFK 8
PVKNF+
Sbjct: 248 PVKNFR 253


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 1 WEPVKNFKGY 10
+EP K F+ Y
Sbjct: 301 FEPTKKFRNY 310


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 1 WEPVKNFKGY 10
+EP K F+ Y
Sbjct: 301 FEPTKKFRNY 310


>sp|CBID_METMA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina mazei (strain ATCC

Query: 2 EPVKNFK 8
+PV NFK
Sbjct: 3 DPVNNFK 9


>sp|CBID_METBF|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EPVKNFK 8
+PV NFK
Sbjct: 3 DPVNNFK 9


>sp|RNH2_METHJ|RIBONUCLEASE HII|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 WEPVKNF 7
WE VKN
Sbjct: 194 WETVKNL 200


>sp|CBID_METAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 EPVKNFK 8
+PV NFK
Sbjct: 3 DPVNNFK 9


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 4 VKNFKGY 10
+KN KGY
Sbjct: 35 IKNVKGY 41


>sp|CBIG_METJA|PROBABLE cobalt-precorrin-5A hydrolase|Methanocaldococcus jannaschii

Query: 2 EPVKNFK 8
EP+K+FK
Sbjct: 33 EPIKDFK 39


>sp|CPS_METS3|CARBAMOYL-PHOSPHATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EPVKNFK 8
EP+K+FK
Sbjct: 328 EPLKSFK 334


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 1 WEPVKNFKGY 10
+EP K F+ Y
Sbjct: 302 FEPTKGFRKY 311


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEPVKNFKGY 10
+EPV+N + Y
Sbjct: 459 YEPVENSQDY 468


>sp|HEM1_META3|GLUTAMYL-TRNA reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 VKNFKGY 10
+KN KGY
Sbjct: 234 LKNIKGY 240


>sp|HIS8_PYRFU|HISTIDINOL-PHOSPHATE aminotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEPVKNFKGY 10
WE + NF+ Y
Sbjct: 3 WEEILNFEPY 12


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 2 EPVKNFKGY 10
E KN+K Y
Sbjct: 328 ETAKNYKNY 336


>sp|Y950_SULTO|UPF0200 protein STK_09500|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WEPVKNFK 8
WE ++ FK
Sbjct: 90 WEEIEEFK 97


>sp|PYRK_PYRHO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus horikoshii

Query: 1 WEPVKNFKGY 10
WE KN K +
Sbjct: 11 WEVAKNIKAF 20


>sp|PDAD_METAR|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocella arvoryzae (strain DSM 22066

Query: 2 EPVKNFKGY 10
+PVKNF GY
Sbjct: 96 DPVKNF-GY 103


>sp|PYRK_PYRFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus furiosus

Query: 1 WEPVKNFKGY 10
WE KN K +
Sbjct: 11 WEVAKNIKAF 20


>sp|NEP1_PYRHO|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus horikoshii (strain

Query: 1 WEPVKNFKG 9
WE +K FK
Sbjct: 221 WEVIKKFKS 229




140|SequenceR|705|696|GALRQWEPVK

>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ALRQWEPVK 10
ALR+W+P++
Sbjct: 34 ALREWKPLE 42


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GALRQWEP 8
GALR++EP
Sbjct: 534 GALREFEP 541


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 GALRQWEP 8
GALR++EP
Sbjct: 532 GALREFEP 539


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 1 GALRQWEP 8
GALR++EP
Sbjct: 532 GALREFEP 539


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GALRQWEP 8
GALR++EP
Sbjct: 535 GALREFEP 542


>sp|HCGE_METTM|GUANYLYLPYRIDINOL adenylase HcgE|Methanothermobacter marburgensis (strain ATCC

Query: 3 LRQWEPV 9
+R WEPV
Sbjct: 181 IRDWEPV 187


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 1 GALRQWEP 8
GALR++EP
Sbjct: 536 GALREFEP 543


>sp|G3P_PYRAR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GALRQWEPVK 10
GA+ +WE +K
Sbjct: 319 GAMPKWESIK 328


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 GALRQWEP 8
GALR++EP
Sbjct: 535 GALREFEP 542


>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GALRQWEP 8
GA+ +W+P
Sbjct: 109 GAMEKWKP 116


>sp|FLPA_PICTO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Picrophilus torridus (strain

Query: 3 LRQWEP 8
LR+W+P
Sbjct: 38 LREWDP 43


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 2 ALRQWE 7
ALR+WE
Sbjct: 31 ALRRWE 36


>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 3 LRQWEPV 9
+R+W PV
Sbjct: 110 IRRWRPV 116


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LRQWEPVK 10
L W+P+K
Sbjct: 94 LNVWDPIK 101


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 2 ALRQWEPVK 10
A R W PV+
Sbjct: 652 ATRSWNPVE 660




141|SequenceR|710|701|EKAAKGALRQ

>sp|MTD_METB6|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoregula boonei

Query: 1 EKAAKGALRQ 10
EKA G LRQ
Sbjct: 251 EKAGDGILRQ 260


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 4 AKGALRQ 10
AKGALR+
Sbjct: 532 AKGALRE 538


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 4 AKGALRQ 10
AKGALR+
Sbjct: 530 AKGALRE 536


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 4 AKGALRQ 10
AKGALR+
Sbjct: 530 AKGALRE 536




142|SequenceR|715|706|AFKEVEKAAK

>sp|EF1A_PYRIL|ELONGATION factor 1-alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AFKEVEKAAK 10
AFKE+E+ AK
Sbjct: 48 AFKEIEEMAK 57


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 AFKEVEKAAK 10
AFKE+E+ AK
Sbjct: 48 AFKEIEEMAK 57


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 AFKEVEKAAK 10
AF+E+EKA K
Sbjct: 433 AFEEIEKALK 442


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 AFKEVEKAAK 10
FKE+E+ AK
Sbjct: 48 GFKEIEEMAK 57




143|SequenceR|720|711|DVKEKAFKEV

>sp|HEM1_METS3|GLUTAMYL-TRNA reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DVKEKAFKE 9
D K+KAFKE
Sbjct: 107 DAKQKAFKE 115


>sp|EF1A_PYRIL|ELONGATION factor 1-alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VKEKAFKEV 10
V EKAFKE+
Sbjct: 44 VDEKAFKEI 52


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VKEKAFKEV 10
V EKAFKE+
Sbjct: 44 VDEKAFKEI 52


>sp|AMZA_PYRHO|ARCHAEMETZINCIN horikoshii (strain ATCC 700860

Query: 2 VKEKAFKEV 10
+KE+A KEV
Sbjct: 127 LKERALKEV 135


>sp|Y2164_ARCFU|UNCHARACTERIZED protein AF_2164|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVKEKAF 7
+VKEKAF
Sbjct: 44 EVKEKAF 50


>sp|Y639_METJA|UNCHARACTERIZED protein MJ0639|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EKAFKEV 10
EKAFKEV
Sbjct: 32 EKAFKEV 38


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 EKAFKEV 10
EKAFKEV
Sbjct: 437 EKAFKEV 443


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVKEKAF 7
D+KEK F
Sbjct: 86 DIKEKTF 92


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VKEKAFKEV 10
V EK FKE+
Sbjct: 44 VDEKGFKEI 52




144|SequenceR|725|716|HMLVLDVKEK

>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HMLVLDVKEK 10
HMLV KEK
Sbjct: 459 HMLVYSAKEK 468


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HMLVLDVKE 9
HML+L+VK+
Sbjct: 236 HMLLLEVKD 244


>sp|SYC_HALSA|CYSTEINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LVLDVKEK 10
LVLDV+E+
Sbjct: 452 LVLDVREQ 459


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 1 HMLVLDVKEK 10
HM+V++ +EK
Sbjct: 438 HMIVVNEEEK 447


>sp|PYRF_THEVO|OROTIDINE 5'-phosphate decarboxylase|Thermoplasma volcanium (strain ATCC

Query: 2 MLVLDVKEK 10
++ LDVKEK
Sbjct: 6 IVALDVKEK 14




145|SequenceR|730|721|MRDRWHMLVL

>sp|RPO3_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma acidophilum (strain ATCC

Query: 1 MRDRWHMLV 9
++DRW +LV
Sbjct: 258 LKDRWDILV 266


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 2 RDRWHMLVL 10
RD W +LVL
Sbjct: 293 RDAWSVLVL 301


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 MRDRWH 6
+RD WH
Sbjct: 19 LRDNWH 24


>sp|SECD_HALVD|PROTEIN-EXPORT membrane protein SecD|Haloferax volcanii (strain ATCC 29605

Query: 1 MRDRWHMLVL 10
+RD W ++ L
Sbjct: 4 LRDNWRVIFL 13




146|SequenceR|735|726|KQAIGMRDRW

>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 2 QAIGMRDRW 10
+ IG+ DRW
Sbjct: 526 EDIGILDRW 534


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 3 AIGMRDRW 10
AIG R+ W
Sbjct: 328 AIGAREAW 335


>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 5 GMRDRW 10
G+R+RW
Sbjct: 69 GIRERW 74




147|SequenceR|740|731|QNINEKQAIG

>sp|DPM1L_HALVD|DOLICHYL-PHOSPHATE hexose transferase HVO_1613|Haloferax volcanii (strain ATCC 29605

Query: 4 NEKQAIG 10
NE+QAIG
Sbjct: 17 NEEQAIG 23


>sp|PFDA1_THEKO|PREFOLDIN subunit alpha 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QNINEKQAIG 10
Q I +KQA+G
Sbjct: 132 QEIQQKQAMG 141


>sp|PFDA_PYRAB|PREFOLDIN subunit alpha|Pyrococcus abyssi (strain GE5 /

Query: 1 QNINEKQAIG 10
Q I +KQA+G
Sbjct: 133 QEIQQKQAMG 142


>sp|RL18A_SULAC|LARGE ribosomal subunit protein eL20|Sulfolobus acidocaldarius (strain

Query: 3 INEKQAI 9
+NEKQAI
Sbjct: 33 LNEKQAI 39


>sp|RL18A_SACS2|LARGE ribosomal subunit protein eL20|Saccharolobus solfataricus (strain

Query: 3 INEKQAI 9
+NEKQAI
Sbjct: 33 LNEKQAI 39


>sp|RL18A_SACI7|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 3 INEKQAI 9
+NEKQAI
Sbjct: 33 LNEKQAI 39


>sp|RL18A_SACI6|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 3 INEKQAI 9
+NEKQAI
Sbjct: 33 LNEKQAI 39


>sp|RL18A_SACI4|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 3 INEKQAI 9
+NEKQAI
Sbjct: 33 LNEKQAI 39


>sp|RL18A_SACI3|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 3 INEKQAI 9
+NEKQAI
Sbjct: 33 LNEKQAI 39


>sp|RL18A_SACI2|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 3 INEKQAI 9
+NEKQAI
Sbjct: 33 LNEKQAI 39


>sp|RL18A_SACI1|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 3 INEKQAI 9
+NEKQAI
Sbjct: 33 LNEKQAI 39




148|SequenceR|745|736|LVVPKQNINE

>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LVVPKQNIN 9
+VVPKQNI+
Sbjct: 146 VVVPKQNID 154


>sp|Y286_KORCO|UPF0282 protein Kcr_0286|Korarchaeum cryptofilum (strain OPF8)

Query: 4 PKQNINE 10
PK+NIN+
Sbjct: 98 PKRNINQ 104


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 2 VVPKQNINE 10
+VPK++IN+
Sbjct: 328 IVPKEHINK 336


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 LVVPKQNINE 10
+V P QN+N+
Sbjct: 247 VVAPAQNLND 256


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LVVPKQNINE 10
+++PK NI++
Sbjct: 564 VIIPKDNIDD 573


>sp|Y271_METJA|UNCHARACTERIZED protein MJ0271|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVVPKQNINE 10
L + K NINE
Sbjct: 43 LFIDKNNINE 52




149|SequenceR|750|741|QRRKRLVVPK

>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 RRKRLVVPK 10
+RKR V+PK
Sbjct: 153 KRKRFVIPK 161


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 RRKRLVVPK 10
+RK+ VVPK
Sbjct: 154 KRKKFVVPK 162


>sp|UBIX_THEAC|FLAVIN prenyltransferase UbiX|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QRRKRLVVPK 10
+RR+ +VVP+
Sbjct: 110 ERRRLIVVPR 119


>sp|RS4E_NATPD|SMALL ribosomal subunit protein eS4|Natronomonas pharaonis (strain ATCC

Query: 3 RKRLVVPK 10
+KRL VPK
Sbjct: 5 QKRLAVPK 12


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 RRKRLVVPK 10
+RK+ +VP+
Sbjct: 154 KRKKFIVPR 162


>sp|UBIX_METJA|FLAVIN prenyltransferase UbiX|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QRRKRLVVPK 10
+RRK +++P+
Sbjct: 111 ERRKLIIMPR 120




150|SequenceR|755|746|EIKIRQRRKR

***** No hits found ******


151|SequenceR|760|751|LDWNAEIKIR

>sp|KAE1_SULTO|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfurisphaera tokodaii

Query: 2 DWNAEIKI 9
DWN E+KI
Sbjct: 277 DWNVEVKI 284


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain ATCC

Query: 2 DWNAEIK 8
DWNAE++
Sbjct: 165 DWNAELE 171


>sp|MCH_METBU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LDWNAEIKI 9
LDW ++KI
Sbjct: 16 LDWEEDVKI 24


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DWNAEIK 8
DW AEIK
Sbjct: 326 DWPAEIK 332


>sp|AGL13_HALVD|PROBABLE low-salt glycan biosynthesis epimerase|Haloferax volcanii (strain

Query: 2 DWNAEI 7
DWNAEI
Sbjct: 149 DWNAEI 154


>sp|SURE_METKA|5'-NUCLEOTIDASE SurE|Methanopyrus kandleri (strain AV19 /

Query: 3 WNAEIKI 9
WN EIK+
Sbjct: 178 WNGEIKV 184


>sp|GPDA_METTH|GLYCEROL-3-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 1 LDWNAEI 7
L WNAE+
Sbjct: 19 LSWNAEM 25


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LDWNAEIK 8
+DW EIK
Sbjct: 335 IDWPTEIK 342


>sp|SYDND_METMA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDWNAEIK 8
+DW EIK
Sbjct: 335 IDWPTEIK 342


>sp|SYDND_METAC|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDWNAEIK 8
+DW EIK
Sbjct: 335 IDWPTEIK 342


>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 2 DWNAEIK 8
DW +EIK
Sbjct: 325 DWPSEIK 331


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DWNAEIK 8
DW +EIK
Sbjct: 326 DWPSEIK 332


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DWNAEIK 8
DW +EIK
Sbjct: 326 DWPSEIK 332


>sp|KAE1_SACS2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 2 DWNAEIKI 9
+WN +IKI
Sbjct: 275 EWNVQIKI 282


>sp|Y1344_SULAC|PUTATIVE HTH-type transcriptional regulatory protein|Sulfolobus

Query: 2 DWNAEIKI 9
D+N E+KI
Sbjct: 200 DYNEEVKI 207


>sp|NREA_HALVD|DNA repair protein NreA|Haloferax volcanii (strain ATCC 29605

Query: 2 DWNAE 6
DWNAE
Sbjct: 193 DWNAE 197


>sp|DCDB_METMJ|DCTP deaminase, dUMP-forming|Methanoculleus marisnigri (strain ATCC

Query: 1 LDWNAEIKIR 10
+DW E +IR
Sbjct: 4 VDWQIEDRIR 13


>sp|Y350_METKA|UPF0248 protein MK0350|Methanopyrus kandleri (strain AV19 /

Query: 3 WNAEIKI 9
WNAEI +
Sbjct: 44 WNAEIPV 50


>sp|RL2_METB6|LARGE ribosomal subunit protein uL2|Methanoregula boonei (strain DSM

Query: 3 WNAEIKIR 10
W A++K++
Sbjct: 82 WGADVKVK 89




152|SequenceR|765|756|FRYYFLDWNA

>sp|TRUA_METPE|TRNA pseudouridine synthase A|Methanosphaerula palustris (strain ATCC

Query: 1 FRYYFLDW 8
+RY+F DW
Sbjct: 110 YRYFFADW 117


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FRYYFLDWNA 10
+R YFL+ NA
Sbjct: 69 YRQYFLELNA 78


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 FRYYFLDWNA 10
+R YFL+ NA
Sbjct: 67 YRQYFLELNA 76


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 2 RYYFLDWN 9
+YY+ DWN
Sbjct: 14 KYYYEDWN 21


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 RYYFLDW 8
+Y FLDW
Sbjct: 70 QYGFLDW 76


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 FRYYFLDW 8
FR+ FL W
Sbjct: 447 FRHEFLRW 454


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 FRYYFLDWNA 10
FR Y L W
Sbjct: 601 FRKYILKWTG 610


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YYFLDWN 9
YYF D N
Sbjct: 49 YYFFDLN 55


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 2 RYYFLDWN 9
RYY +WN
Sbjct: 15 RYYREEWN 22


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 YYFLDWNA 10
YY L WN+
Sbjct: 532 YYTLYWNS 539


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 YYFLDWNA 10
YY L WN+
Sbjct: 535 YYTLYWNS 542


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 YYFLD 7
YYFLD
Sbjct: 48 YYFLD 52


>sp|PSB2_IGNH4|PROTEASOME subunit beta 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 RYYFLDW 8
R Y LDW
Sbjct: 122 RLYSLDW 128


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 YYFLDW 8
YY LDW
Sbjct: 598 YYPLDW 603


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 YYFLDW 8
YY LDW
Sbjct: 598 YYPLDW 603


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 YYFLDW 8
YY LDW
Sbjct: 598 YYPLDW 603


>sp|Y625_METJA|UNCHARACTERIZED ATP-binding protein MJ0625|Methanocaldococcus jannaschii (strain

Query: 2 RYYFLDW 8
+YY +DW
Sbjct: 194 KYYLIDW 200


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YYFLDWN 9
+ F DWN
Sbjct: 133 FVFFDWN 139


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 YYFLDWN 9
YY L WN
Sbjct: 542 YYTLYWN 548


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YYFLDWN 9
YY L WN
Sbjct: 533 YYTLYWN 539


>sp|Y3526_METJA|UNCHARACTERIZED ATP-binding protein MJECL26|Methanocaldococcus jannaschii (strain

Query: 3 YYFLDW 8
YY +DW
Sbjct: 199 YYLIDW 204


>sp|Y1006_METJA|UNCHARACTERIZED ATP-binding protein MJ1006|Methanocaldococcus jannaschii (strain

Query: 3 YYFLDW 8
YY +DW
Sbjct: 217 YYLIDW 222


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FRYYF-LDW 8
F YY+ LDW
Sbjct: 605 FEYYYPLDW 613


>sp|ENDA_METTH|TRNA-SPLICING endonuclease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 YYFLDW 8
YY +DW
Sbjct: 162 YYLVDW 167


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RYYFLD 7
+YYFLD
Sbjct: 41 KYYFLD 46


>sp|Y297_METJA|UNCHARACTERIZED protein MJ0297|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YFLDW 8
Y+LDW
Sbjct: 37 YYLDW 41


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 FLDWN 9
F+DWN
Sbjct: 140 FMDWN 144


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RYYFLD 7
+YYFLD
Sbjct: 41 KYYFLD 46


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RYYFLD 7
+YYFLD
Sbjct: 41 KYYFLD 46


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 RYYFLD 7
+YYFLD
Sbjct: 41 KYYFLD 46


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 3 YYFLDWNA 10
YY +WNA
Sbjct: 16 YYKAEWNA 23


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FRYYFLDWN 9
F Y F WN
Sbjct: 921 FAYTFKKWN 929




153|SequenceR|770|761|AHDQGFRYYF

>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 1 AHDQGFRYYF 10
AHD+GF+ F
Sbjct: 325 AHDRGFKVLF 334


>sp|RLME_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 1 AHDQGFR 7
AH+QGFR
Sbjct: 15 AHEQGFR 21


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 3 DQGFRYY 9
D G+RYY
Sbjct: 541 DAGYRYY 547


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 1 AHDQGFRYY 9
AHD G YY
Sbjct: 120 AHDSGNSYY 128


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 1 AHDQGFRYY 9
AHD+ FR Y
Sbjct: 38 AHDRSFRPY 46


>sp|ACYP_METHJ|ACYLPHOSPHATASE hungatei JF-1 (strain ATCC

Query: 5 GFRYY 9
GFRYY
Sbjct: 16 GFRYY 20


>sp|Y1384_METJA|PUTATIVE nitroreductase MJ1384|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DQGFRY 8
D+GFRY
Sbjct: 138 DRGFRY 143


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC

Query: 1 AHDQGFRYYF 10
A +QG +++F
Sbjct: 87 AREQGIKWFF 96


>sp|Y2123_ARCFU|UNCHARACTERIZED protein AF_2123|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HDQGFRYYF 10
H GF Y+F
Sbjct: 45 HAAGFGYWF 53


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AHDQGFRYYF 10
A+D F +Y+
Sbjct: 247 AYDSAFNFYY 256


>sp|CBIA_METJA|COBYRINATE a,c-diamide synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AHDQGFRYYF 10
A+D+ F +Y+
Sbjct: 252 AYDKAFNFYY 261


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 1 AHDQGFR 7
A+D+GFR
Sbjct: 40 AYDEGFR 46


>sp|RS14Z_METBU|SMALL ribosomal subunit protein uS14|Methanococcoides burtonii (strain

Query: 1 AHDQGFRYY 9
AHD GF Y
Sbjct: 41 AHDMGFEKY 49


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 2 HDQGFRYYF 10
H G +YF
Sbjct: 105 HSHGLHFYF 113


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 2 HDQGFRYYF 10
H G +YF
Sbjct: 105 HSHGLHFYF 113


>sp|HIS8_HALWD|HISTIDINOL-PHOSPHATE aminotransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DQGFRYY 9
D GF YY
Sbjct: 113 DPGFSYY 119


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 2 HDQGFRYYF 10
H G +YF
Sbjct: 105 HSHGLHFYF 113


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 AHDQGFRYYF 10
A+D+ F +Y+
Sbjct: 250 AYDEVFNFYY 259


>sp|RS14Z_METBF|SMALL ribosomal subunit protein uS14|Methanosarcina barkeri (strain

Query: 1 AHDQGFRYY 9
AHD GF Y
Sbjct: 41 AHDMGFEKY 49


>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DQGFRYY 9
D GF YY
Sbjct: 113 DPGFAYY 119


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 AHDQGFRYYF 10
A+D F +Y+
Sbjct: 251 AYDAAFNFYY 260


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AHDQGFRYYF 10
A+D F +Y+
Sbjct: 244 AYDSAFSFYY 253




154|SequenceR|775|766|ILNSRAHDQG

>sp|DPHB_METHJ|DIPHTHINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LNSRAHDQG 10
L RAH+QG
Sbjct: 95 LRIRAHEQG 103


>sp|THIC2_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LNSRAHDQG 10
L RAHD G
Sbjct: 250 LGQRAHDAG 258


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ILNSRAHDQG 10
IL +AH QG
Sbjct: 747 ILIEKAHSQG 756


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ILNSRAHDQG 10
I+N A DQG
Sbjct: 457 IVNVEAEDQG 466


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ILNSRAHDQG 10
I+N A DQG
Sbjct: 457 IVNVEAEDQG 466


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 2 LNSRAHDQG 10
LN+ HD+G
Sbjct: 67 LNNTIHDRG 75


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ILNSRAHDQG 10
I+N A DQG
Sbjct: 457 IVNVEAEDQG 466




155|SequenceR|780|771|TKFNWILNSR

>sp|Y51A_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514.1|Methanocaldococcus

Query: 2 KFNWILNSR 10
KFN ILN R
Sbjct: 22 KFNIILNKR 30


>sp|DHQS_METVS|3-DEHYDROQUINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KFNWILNS 9
KF WI++S
Sbjct: 2 KFGWIMSS 9


>sp|RS13_METS3|SMALL ribosomal subunit protein uS13|Methanobrevibacter smithii (strain

Query: 4 NWILNSR 10
NW+LN R
Sbjct: 77 NWMLNRR 83


>sp|Y806_METJA|UNCHARACTERIZED peptidase MJ0806|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NWILNS 9
NW+LN+
Sbjct: 143 NWVLNN 148


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 NWILNSR 10
NWI N+R
Sbjct: 436 NWIENAR 442


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 NWILNSR 10
NWI N+R
Sbjct: 436 NWIENAR 442


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KFNWILN 8
K+ W+LN
Sbjct: 408 KYYWVLN 414


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KFNWILN 8
K+ W+LN
Sbjct: 408 KYYWVLN 414


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KFNWILN 8
K+ W+LN
Sbjct: 406 KYYWVLN 412


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KFNWILN 8
K+ W+LN
Sbjct: 407 KYYWVLN 413


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KFNWILN 8
K+ W+LN
Sbjct: 407 KYYWVLN 413


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 KFNWILN 8
K+ W+LN
Sbjct: 412 KYYWVLN 418




156|SequenceR|785|776|KLEERTKFNW

>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLEERTKFNW 10
KLE+ K+NW
Sbjct: 639 KLEDAKKYNW 648


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KLEERTKFN 9
+LE+RT+F+
Sbjct: 283 RLEQRTRFD 291


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 1 KLEERTKFN 9
+LE+RT+F+
Sbjct: 283 RLEQRTRFD 291


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 2 LEERTKFNW 10
E RT+F+W
Sbjct: 219 FEYRTEFDW 227


>sp|VHUD_METMP|F420-NON-REDUCING hydrogenase vhu iron-sulfur subunit|Methanococcus maripaludis

Query: 1 KLEERTKF 8
K EER KF
Sbjct: 78 KAEERVKF 85


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LEERTKFNW 10
LEE ++NW
Sbjct: 391 LEEIREYNW 399


>sp|RS12_METKA|SMALL ribosomal subunit protein uS12|Methanopyrus kandleri (strain AV19

Query: 3 EERTKFNW 10
E+R KF W
Sbjct: 18 EKRKKFRW 25




157|SequenceR|790|781|SELTDKLEER

>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LTDKLEER 10
+TDK+EER
Sbjct: 308 VTDKIEER 315


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 2 ELTDKLEER 10
EL+D++EER
Sbjct: 295 ELSDRVEER 303


>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum

Query: 1 SELTDKLEER 10
+EL D+L+ER
Sbjct: 21 AELRDRLKER 30


>sp|Y2160_ARCFU|UNCHARACTERIZED protein AF_2160|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SELTDKLE 8
SE+TDK E
Sbjct: 62 SEITDKTE 69


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 1 SELTDKLE 8
SEL+DK+E
Sbjct: 36 SELSDKVE 43


>sp|DNAG_THEKO|DNA primase DnaG|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ELTDKLEER 10
ELT++L+ER
Sbjct: 406 ELTNQLKER 414


>sp|DNAG_THEON|DNA primase DnaG|Thermococcus onnurineus (strain NA1)

Query: 2 ELTDKLEER 10
ELT++L+ER
Sbjct: 406 ELTNQLKER 414


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 ELTDKLE 8
ELTDK+E
Sbjct: 266 ELTDKVE 272


>sp|IDI2_IGNH4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SELTDKLEE 9
SEL DK+E+
Sbjct: 176 SELVDKVEK 184




158|SequenceR|795|786|FARMESELTD

>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 1 FARMESELTD 10
F+RME L+D
Sbjct: 245 FSRMEQWLSD 254


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 2 ARMESELTD 10
AR+ +ELTD
Sbjct: 114 ARLAAELTD 122


>sp|MCRG_METBF|METHYL-COENZYME M reductase subunit gamma|Methanosarcina barkeri (strain Fusaro /

Query: 3 RMESELTD 10
+ME+E+TD
Sbjct: 138 QMETEITD 145




159|SequenceR|800|791|ERDINFARME

>sp|PHEA_METJA|PREPHENATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERDINFARME 10
ER+IN R+E
Sbjct: 215 ERNINLTRIE 224


>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 RDINFARM 9
RDINF M
Sbjct: 361 RDINFTSM 368


>sp|Y947_ARCFU|PUTATIVE RNase AF_0947|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERDINFA 7
ER+INFA
Sbjct: 14 EREINFA 20


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ERDINFARME 10
ERD+NF+ E
Sbjct: 373 ERDVNFSWAE 382


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 2 RDINFARM 9
RDI+ ARM
Sbjct: 907 RDIDIARM 914


>sp|COBQ_THEGJ|PROBABLE cobyric acid synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ERDINFARME 10
ER +NF R+E
Sbjct: 435 ERFLNFLRVE 444


>sp|Y3251_SACS2|UPF0282 protein SSO3251|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RDINFARM 9
RDIN+A++
Sbjct: 242 RDINYAQV 249




160|SequenceR|805|796|NASGLERDIN

>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ASGLERDIN 10
ASG ERD+N
Sbjct: 369 ASGFERDVN 377


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 GLERDIN 10
G ERDIN
Sbjct: 883 GFERDIN 889


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 3 SGLERDIN 10
SG+ RDIN
Sbjct: 114 SGVRRDIN 121


>sp|RNH2_SULAC|RIBONUCLEASE HII|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NASGLERDI 9
NAS +ER+I
Sbjct: 108 NASAVEREI 116


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 2 ASGLERDIN 10
A GLERD++
Sbjct: 267 ALGLERDVD 275


>sp|KHSE_THEAC|HOMOSERINE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GLERDI 9
GLERDI
Sbjct: 71 GLERDI 76


>sp|ARGB_METBF|ACETYLGLUTAMATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NASGLERDIN 10
+ SGL RD+N
Sbjct: 235 DVSGLLRDMN 244




161|SequenceR|810|801|NWSIVNASGL

>sp|THI4_METTH|THIAMINE thiazole synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 NWSIVNASGL 10
NWS V +GL
Sbjct: 143 NWSSVEMAGL 152


>sp|PYRF_THEKO|OROTIDINE 5'-phosphate decarboxylase|Thermococcus kodakarensis (strain ATCC

Query: 1 NWSIVNASGL 10
NW ++ SGL
Sbjct: 35 NWPLIIGSGL 44


>sp|PYRF_PYRFU|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NWSIVNASGL 10
NW ++ SGL
Sbjct: 31 NWPLIIGSGL 40


>sp|PYRF_PYRAB|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 NWSIVNASGL 10
NW ++ SGL
Sbjct: 31 NWPLIIGSGL 40


>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NWSIVN 6
NW IVN
Sbjct: 85 NWEIVN 90


>sp|THI4_METMJ|THIAMINE thiazole synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NWSIVNASGL 10
NW+ V+ +GL
Sbjct: 144 NWTPVDMAGL 153


>sp|THI4_ARCFU|THIAMINE thiazole synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WSIVNASGL 10
WS V SGL
Sbjct: 150 WSAVEISGL 158


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WSIVNASGL 10
WS+VN+ L
Sbjct: 246 WSLVNSISL 254




162|SequenceR|815|806|EFEHHNWSIV

>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 2 FEHHNWSI 9
F+HHN SI
Sbjct: 109 FQHHNISI 116


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 3 EHHNW 7
+HHNW
Sbjct: 16 DHHNW 20


>sp|PGMI_PYRCJ|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum calidifontis

Query: 4 HHNW 7
HHNW
Sbjct: 215 HHNW 218


>sp|PGMI_PYRAE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum aerophilum

Query: 4 HHNW 7
HHNW
Sbjct: 218 HHNW 221


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 HHNWSI 9
+HNW+I
Sbjct: 206 YHNWAI 211


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 HHNWSI 9
+HNW+I
Sbjct: 206 YHNWAI 211


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 HHNWSI 9
+HNW+I
Sbjct: 206 YHNWAI 211


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 HHNWSI 9
+HNW+I
Sbjct: 206 YHNWAI 211


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FEHHNWSI 9
FEH W +
Sbjct: 69 FEHFKWDV 76


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 FEHHNW 7
EHH W
Sbjct: 15 LEHHKW 20


>sp|SERK_STAMF|ATP-DEPENDENT L-serine kinase|Staphylothermus marinus (strain ATCC 43588

Query: 4 HHNWSIV 10
HH W+ V
Sbjct: 76 HHRWAAV 82


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 4 HHNWSIV 10
HH W+ V
Sbjct: 77 HHRWAAV 83


>sp|SERK_DESA1|ATP-DEPENDENT L-serine kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 4 HHNWSIV 10
HH W+ V
Sbjct: 77 HHRWAAV 83


>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 EHHNWSIV 10
EH W IV
Sbjct: 81 EHPTWKIV 88


>sp|TRPF_METJA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EFEHHNWSI 9
E + HNW++
Sbjct: 155 EGKTHNWAV 163


>sp|TRM56_HALMA|TRNA (cytidine(56)-2'-O)-methyltransferase|Haloarcula marismortui

Query: 2 FEHHNWSI 9
+EH +W++
Sbjct: 121 YEHADWNV 128


>sp|KORB_ARCFU|2-OXOGLUTARATE synthase subunit KorB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EHHNWSIV 10
+HH +S+V
Sbjct: 188 QHHGFSVV 195


>sp|Y352_METJA|UNCHARACTERIZED protein MJ0352|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EHHNW 7
EH+NW
Sbjct: 34 EHNNW 38


>sp|Y870_ARCFU|UNCHARACTERIZED protein AF_0870|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HHNWSI 9
HH W I
Sbjct: 4 HHKWGI 9




163|SequenceR|820|811|CEYKVEFEHH

>sp|MCRC_METTM|METHYL-COENZYME M reductase I operon|Methanothermobacter marburgensis (strain ATCC

Query: 1 CEYKVEFE 8
CEY V+FE
Sbjct: 136 CEYPVDFE 143


>sp|MCRC_METTH|METHYL-COENZYME M reductase I operon|Methanothermobacter thermautotrophicus (strain

Query: 1 CEYKVEFE 8
CEY V+FE
Sbjct: 136 CEYPVDFE 143


>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 4 KVEFEHH 10
KVEF HH
Sbjct: 71 KVEFSHH 77


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EYKVEFEH 9
EY+VEFE+
Sbjct: 480 EYRVEFEN 487


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EYKVEFEH 9
EY+VEFE+
Sbjct: 480 EYRVEFEN 487


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EYKVEFEH 9
EY+VEFE+
Sbjct: 480 EYRVEFEN 487


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii

Query: 2 EYKVEFE 8
EY VEFE
Sbjct: 78 EYDVEFE 84


>sp|CREN7_PYRAE|CHROMATIN protein Cren7|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EYKVEFE 8
EY+VE+E
Sbjct: 9 EYEVEYE 15


>sp|TKSU_THEKO|TK-SUBTILISIN kodakarensis (strain ATCC BAA-918

Query: 4 KVEFEHH 10
KVEF+H
Sbjct: 83 KVEFDHQ 89


>sp|RLME_CENSY|RIBOSOMAL RNA large subunit methyltransferase|Cenarchaeum symbiosum (strain

Query: 2 EYKVEFEHH 10
EY EF H
Sbjct: 156 EYAAEFREH 164


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 CEYKVEFEHH 10
C++K++ +H+
Sbjct: 767 CDFKLDGDHY 776


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 EYKVEFEH 9
EYK ++EH
Sbjct: 685 EYKKKYEH 692




164|SequenceR|825|816|IEEALCEYKV

>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 IEEALCEYKV 10
IE LC+Y+V
Sbjct: 68 IETGLCQYEV 77


>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM 5456

Query: 1 IEEALC 6
IEEALC
Sbjct: 128 IEEALC 133


>sp|RRP42_METMA|EXOSOME complex component Rrp42|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EEALCEYKV 10
EEA+CE K+
Sbjct: 206 EEAVCETKL 214


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 2 EEALCEYKV 10
EEA+CE K+
Sbjct: 206 EEAVCETKL 214


>sp|NADA_PYRAE|QUINOLINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EEALCEY 8
E+A+CEY
Sbjct: 260 EDAICEY 266


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 ALCEYK 9
A+CEYK
Sbjct: 246 AICEYK 251


>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 EEALCEYKV 10
EEA +YKV
Sbjct: 39 EEASAQYKV 47


>sp|Y1496_PYRFU|UPF0252 protein PF1496|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EALCEYK 9
E LCEY+
Sbjct: 138 ENLCEYR 144


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IEEALCEYKV 10
+EEAL +Y+V
Sbjct: 309 LEEALRKYEV 318


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 ALCEYK 9
A+CEYK
Sbjct: 246 AICEYK 251


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 ALCEYK 9
A+CEYK
Sbjct: 246 AICEYK 251


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 ALCEYK 9
A+CEYK
Sbjct: 246 AVCEYK 251


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 ALCEYK 9
A+CEYK
Sbjct: 246 AICEYK 251


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EALCEYKV 10
E+ CEY+V
Sbjct: 135 ESYCEYEV 142


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IEEALCEYK 9
IEEAL YK
Sbjct: 167 IEEALTLYK 175




165|SequenceR|830|821|YDGIKIEEAL

>sp|GPDA_ARCFU|NADP(+)-DEPENDENT glycerol-3-phosphate dehydrogenase|Archaeoglobus fulgidus (strain

Query: 1 YDGIKIEEAL 10
Y+G+K+EE L
Sbjct: 319 YEGLKVEEVL 328


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DGIKIEEA 9
DG+KIEEA
Sbjct: 321 DGLKIEEA 328


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YDGIKIEEA 9
Y G+KIEEA
Sbjct: 303 YAGLKIEEA 311


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YDGIKIEEA 9
Y G+KIEEA
Sbjct: 303 YAGLKIEEA 311


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DGIKIEEA 9
DG+KIE+A
Sbjct: 347 DGLKIEQA 354


>sp|GYAR_THEON|GLYOXYLATE reductase|Thermococcus onnurineus (strain NA1)

Query: 1 YDGIKIEEA 9
YD I IEEA
Sbjct: 78 YDNIDIEEA 86


>sp|GYAR_PYRHO|GLYOXYLATE reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YDGIKIEEA 9
YD I IEEA
Sbjct: 78 YDNIDIEEA 86


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 YDGIKIEEA 9
Y G+K+EEA
Sbjct: 303 YAGLKVEEA 311


>sp|GYAR_THELN|GLYOXYLATE reductase|Thermococcus litoralis (strain ATCC 51850

Query: 1 YDGIKIEEA 9
YD I IEEA
Sbjct: 78 YDNIDIEEA 86


>sp|GYAR_THEKO|GLYOXYLATE reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YDGIKIEEA 9
YD I +EEA
Sbjct: 78 YDNIDVEEA 86


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GIKIEEAL 10
GIK EEAL
Sbjct: 188 GIKTEEAL 195


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GIKIEEAL 10
GIK EEAL
Sbjct: 188 GIKTEEAL 195


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GIKIEEAL 10
GIK EEAL
Sbjct: 188 GIKTEEAL 195


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GIKIEEAL 10
GIK EEAL
Sbjct: 188 GIKTEEAL 195


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YDGIKIEEAL 10
Y+ +KIEEAL
Sbjct: 482 YELMKIEEAL 491


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 YDGIKIEEAL 10
Y+ +KIEEAL
Sbjct: 482 YELMKIEEAL 491


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YDGIKIEEAL 10
Y+ +KIEEAL
Sbjct: 483 YELMKIEEAL 492


>sp|GYAR_PYRAB|GLYOXYLATE reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 YDGIKIEEA 9
YD I +EEA
Sbjct: 79 YDNIDVEEA 87


>sp|NNRE_CENSY|NAD(P)H-HYDRATE epimerase|Cenarchaeum symbiosum (strain A)

Query: 2 DGIKIEEA 9
DGI+ EEA
Sbjct: 83 DGIRTEEA 90


>sp|GYAR_PYRFU|GLYOXYLATE reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YDGIKIEEA 9
YD I +EEA
Sbjct: 78 YDNIDVEEA 86


>sp|ADHS_METTH|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 YDGIKIEEAL 10
+DG+ +EEA+
Sbjct: 250 HDGLSVEEAV 259


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 YDGIKIEEAL 10
Y+G IE+AL
Sbjct: 216 YEGFNIEDAL 225


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 YDGIKIEEAL 10
Y+G IE+AL
Sbjct: 216 YEGFNIEDAL 225


>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DGIKIEEAL 10
DGI EEAL
Sbjct: 113 DGISYEEAL 121


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 1 YDGIKIEEAL 10
Y+G IE+AL
Sbjct: 213 YEGYNIEDAL 222


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain Fusaro

Query: 2 DGIKIEEAL 10
GIK+ EAL
Sbjct: 147 SGIKVSEAL 155


>sp|GYAR_THEGJ|GLYOXYLATE reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 YDGIKIEEA 9
YD + +EEA
Sbjct: 78 YDNVDVEEA 86


>sp|Y007_METJA|PUTATIVE dehydratase subunit MJ0007|Methanocaldococcus jannaschii (strain

Query: 2 DGIKIEEAL 10
+G K+EEAL
Sbjct: 332 EGAKVEEAL 340


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDGIKIEEA 9
Y G+K EEA
Sbjct: 305 YKGLKTEEA 313


>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 YDGIKIEEAL 10
Y+G +EEAL
Sbjct: 210 YNGPTLEEAL 219


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YDGIKIEE 8
YDG+K+++
Sbjct: 161 YDGVKVKD 168


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 YDGIKIEE 8
YDG+K+++
Sbjct: 161 YDGVKVKD 168


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 YDGIKIEE 8
YDG+K+++
Sbjct: 161 YDGVKVKD 168


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 YDGIKIEE 8
YDG+K+++
Sbjct: 161 YDGVKVKD 168


>sp|PSB_HALVD|PROTEASOME subunit beta|Haloferax volcanii (strain ATCC 29605

Query: 2 DGIKIEEA 9
DG+ IEEA
Sbjct: 192 DGLSIEEA 199


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GIKIEEAL 10
GIK EEA+
Sbjct: 188 GIKTEEAI 195


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YDGIKIEEA 9
Y G+K EEA
Sbjct: 303 YAGLKTEEA 311




166|SequenceR|835|826|LLRLYYDGIK

>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LLRLYYDGIK 10
+LR YDGI+
Sbjct: 80 MLRAMYDGIQ 89


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RLYYDGIK 10
RL+YDG++
Sbjct: 7 RLWYDGLE 14


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRLYYDGI 9
LRLYY G+
Sbjct: 458 LRLYYGGV 465


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LLRLYYDGIK 10
L++LYY+G K
Sbjct: 894 LVKLYYEGAK 903


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 2 LRLYYDGIK 10
LR YYD ++
Sbjct: 423 LRTYYDALR 431


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 LLRLYYDGIK 10
LLR+ YD +K
Sbjct: 558 LLRMSYDEVK 567


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 1 LLRLYYDG 8
+LRL YDG
Sbjct: 62 VLRLLYDG 69


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 3 RLYYDG 8
+LYYDG
Sbjct: 243 KLYYDG 248


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LLRLYYDGI 9
LR+Y DG+
Sbjct: 157 FLRMYRDGL 165


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LLRLYYDGIK 10
LL+ YDGI+
Sbjct: 77 LLKSIYDGIQ 86


>sp|Y002_METJA|UNCHARACTERIZED protein MJ0002|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLRLYYDGI 9
+LR YY GI
Sbjct: 142 ILRAYYQGI 150


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 1 LLRLYYDGIK 10
+L+ YDGI+
Sbjct: 79 MLKAMYDGIQ 88


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 LLRLYYDGIK 10
+L+ YDGI+
Sbjct: 79 MLKAMYDGIQ 88


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 LLRLYYDGIK 10
+L+ YDGI+
Sbjct: 79 MLKAMYDGIQ 88


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 LLRLYYDGIK 10
+L+ YDGI+
Sbjct: 79 MLKAMYDGIQ 88


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 LLRLYYDGIK 10
+L+ YDGI+
Sbjct: 79 MLKAMYDGIQ 88


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC

Query: 1 LLRLYYDGIK 10
+L+ YDGI+
Sbjct: 79 MLKAMYDGIQ 88


>sp|KPRS_METMA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LRLYYDGIK 10
LRL++ G+K
Sbjct: 259 LRLFHAGVK 267


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LLRLYYDGI 9
+++ YYDG+
Sbjct: 399 MVKRYYDGV 407


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLRLYYDGIK 10
+ R+YY G K
Sbjct: 384 ITRIYYKGYK 393


>sp|TRUA_THEAC|TRNA pseudouridine synthase A|Thermoplasma acidophilum (strain ATCC

Query: 1 LLRLYYDGIK 10
L +YYDGI+
Sbjct: 208 LWDIYYDGIE 217


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 4 LYYDG 8
LYYDG
Sbjct: 240 LYYDG 244


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 4 LYYDG 8
LYYDG
Sbjct: 249 LYYDG 253


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLRLYYDGIK 10
LL+LY DG K
Sbjct: 284 LLQLYMDGKK 293


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 LYYDG 8
LYYDG
Sbjct: 248 LYYDG 252


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 LYYDG 8
LYYDG
Sbjct: 248 LYYDG 252


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 LYYDG 8
LYYDG
Sbjct: 248 LYYDG 252


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 LYYDG 8
LYYDG
Sbjct: 248 LYYDG 252


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 LYYDG 8
LYYDG
Sbjct: 248 LYYDG 252


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 LYYDG 8
LYYDG
Sbjct: 248 LYYDG 252


>sp|RL24_AERPE|LARGE ribosomal subunit protein uL24|Aeropyrum pernix (strain ATCC

Query: 2 LRLYYDGI 9
LR+Y DG+
Sbjct: 76 LRIYIDGV 83


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLRLYYDGIK 10
L+R YDG++
Sbjct: 84 LIRNIYDGVQ 93


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 LYYDG 8
LYYDG
Sbjct: 243 LYYDG 247


>sp|MNTP_METB6|MANGANESE exporter MntP|Methanoregula boonei (strain DSM 21154

Query: 2 LRLYYDGIK 10
+++ YDGI+
Sbjct: 82 IKMIYDGIR 90


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 LYYDG 8
LYYDG
Sbjct: 247 LYYDG 251


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 4 LYYDG 8
LYYDG
Sbjct: 243 LYYDG 247


>sp|DTDA_THEKO|D-AMINOACYL-TRNA deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LYYDGI 9
+YYDG+
Sbjct: 54 IYYDGL 59


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 4 LYYDG 8
LYYDG
Sbjct: 243 LYYDG 247


>sp|KAE1_THEON|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus onnurineus

Query: 2 LRLYYDGIK 10
LR+Y G+K
Sbjct: 295 LRMYLGGVK 303


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 LYYDG 8
LYYDG
Sbjct: 243 LYYDG 247


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 LYYDG 8
LYYDG
Sbjct: 243 LYYDG 247


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 4 LYYDG 8
LYYDG
Sbjct: 243 LYYDG 247


>sp|AATE_SACI7|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LRLYYDG 8
+R+YY+G
Sbjct: 156 IRIYYEG 162


>sp|AATE_SACI6|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LRLYYDG 8
+R+YY+G
Sbjct: 156 IRIYYEG 162


>sp|AATE_SACI4|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LRLYYDG 8
+R+YY+G
Sbjct: 156 IRIYYEG 162


>sp|AATE_SACI3|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain M.16.27)

Query: 2 LRLYYDG 8
+R+YY+G
Sbjct: 156 IRIYYEG 162


>sp|AATE_SACI2|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LRLYYDG 8
+R+YY+G
Sbjct: 156 IRIYYEG 162


>sp|AATE_SACI1|A-TYPE ATP synthase subunit E|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LRLYYDG 8
+R+YY+G
Sbjct: 156 IRIYYEG 162


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LLRLYYDGIK 10
+LR YY+ IK
Sbjct: 671 ILRRYYEFIK 680


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 4 LYYDG 8
LYYDG
Sbjct: 238 LYYDG 242




167|SequenceR|840|831|EDEELLLRLY

>sp|HEM1_METTP|GLUTAMYL-TRNA reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EDEELLLRLY 10
E EELL R+Y
Sbjct: 330 EAEELLARIY 339


>sp|KHSE_THEGJ|HOMOSERINE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EDEELLLR 8
EDE L+LR
Sbjct: 107 EDERLILR 114


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 1 EDEELLLRLY 10
ED+ELL+R +
Sbjct: 177 EDKELLIRKF 186


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 1 EDEELLLRL 9
+DEE LLR+
Sbjct: 149 DDEETLLRI 157


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EDEELLLRLY 10
ED E L R+Y
Sbjct: 209 EDNETLTRVY 218


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 1 EDEELLLRLY 10
EDE +LR+Y
Sbjct: 59 EDESEILRVY 68




168|SequenceR|845|836|GSEENEDEEL

>sp|RS13_METMA|SMALL ribosomal subunit protein uS13|Methanosarcina mazei (strain ATCC

Query: 2 SEENEDEEL 10
+EEN +EEL
Sbjct: 12 AEENNNEEL 20


>sp|CMR4_SACS2|CRISPR system CMR subunit Cmr4|Saccharolobus solfataricus (strain ATCC

Query: 1 GSEENEDE 8
GS+EN DE
Sbjct: 76 GSDENPDE 83


>sp|RS13_METAC|SMALL ribosomal subunit protein uS13|Methanosarcina acetivorans (strain

Query: 3 EENEDEEL 10
EEN +EEL
Sbjct: 13 EENNNEEL 20




169|SequenceR|850|841|SRKISGSEEN

>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SRKISGSEE 9
SRK+SG +E
Sbjct: 213 SRKLSGEDE 221


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 1 SRKISGSEE 9
SRK+SG +E
Sbjct: 213 SRKLSGEDE 221


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SRKISGSEE 9
SRK+SG +E
Sbjct: 213 SRKLSGEDE 221


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SRKISGSEE 9
SRK+SG +E
Sbjct: 213 SRKLSGEDE 221


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SRKISGSEE 9
SRK+SG +E
Sbjct: 213 SRKLSGEDE 221


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SRKISGSEE 9
SRK+SG +E
Sbjct: 213 SRKLSGEDE 221


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SRKISGSEE 9
SRK+SG +E
Sbjct: 213 SRKLSGEDE 221


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SRKISGSEE 9
SRK+SG +E
Sbjct: 213 SRKLSGEDE 221


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SRKISGSEE 9
SRK+SG +E
Sbjct: 213 SRKLSGEDE 221


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 1 SRKISGSEE 9
SRK+SG +E
Sbjct: 212 SRKLSGMDE 220


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 3 KISGSEEN 10
KI+G EEN
Sbjct: 108 KINGLEEN 115




170|SequenceR|855|846|NFFEYSRKIS

>sp|ABLB_METMP|BETA-LYSINE N(6)-acetyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 FFEYSRKIS 10
FFE SRKIS
Sbjct: 87 FFEESRKIS 95


>sp|DAPAL_THEKO|UNCHARACTERIZED DapA-like lyase TK1237|Thermococcus kodakarensis (strain ATCC

Query: 3 FEYSRKIS 10
FEYSRK++
Sbjct: 231 FEYSRKLA 238


>sp|KCY_PYRAE|CYTIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 FEYSRKI 9
F+YSRKI
Sbjct: 177 FKYSRKI 183


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 NFFEYSRK 8
NF EY RK
Sbjct: 400 NFIEYKRK 407


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FFEYSRKI 9
++EY+RK+
Sbjct: 188 YYEYARKL 195


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FFEYSRKI 9
++EY+RK+
Sbjct: 180 YYEYARKL 187


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 FFEYSRKI 9
++EY+RK+
Sbjct: 191 YYEYARKL 198


>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NFFEYSRKI 9
N EY RKI
Sbjct: 183 NLTEYGRKI 191


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FEYSRKIS 10
FEY RK+S
Sbjct: 287 FEYIRKLS 294


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FFEYSRKI 9
++EY RK+
Sbjct: 188 YYEYGRKL 195


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 3 FEYSRKIS 10
FEY R+IS
Sbjct: 191 FEYLRRIS 198


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NFFEYSRKIS 10
N+ EY K+S
Sbjct: 927 NYLEYLEKVS 936


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 FFEYSRKI 9
++EY RK+
Sbjct: 172 YYEYGRKL 179


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 FFEYSRKI 9
++EY RK+
Sbjct: 172 YYEYGRKL 179


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FFEYSRKI 9
++EY RK+
Sbjct: 172 YYEYGRKL 179


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 FFEYSRKI 9
++EY RK+
Sbjct: 172 YYEYGRKL 179


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FFEYSRKI 9
++EY RK+
Sbjct: 170 YYEYGRKL 177




171|SequenceR|860|851|RHYLENFFEY

>sp|RL18E_NANEQ|LARGE ribosomal subunit protein eL18|Nanoarchaeum equitans (strain

Query: 3 YLENFFE 9
YLENF E
Sbjct: 98 YLENFVE 104


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RHYLENFFE 9
R Y NFFE
Sbjct: 66 REYYLNFFE 74


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RHYLENFFE 9
+H ENF E
Sbjct: 414 KHIFENFIE 422


>sp|CDPAS_PYRAB|CDP-ARCHAEOL synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 HYLENFFEY 10
H+L N F Y
Sbjct: 151 HWLANVFAY 159


>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RHYLENF 7
R+YLE+F
Sbjct: 45 RYYLEHF 51


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RHYLENF 7
R+YLE+F
Sbjct: 45 RYYLEHF 51


>sp|METK_CALMQ|S-ADENOSYLMETHIONINE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RHYLENF 7
++Y+ENF
Sbjct: 48 KYYMENF 54


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 RHYLENFFE 9
RH+L F E
Sbjct: 233 RHFLAEFIE 241


>sp|HIS7_METHJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RHYLENFFE 9
RH+ E+F +
Sbjct: 135 RHFFESFIQ 143


>sp|UVRC_METMP|UVRABC system protein C|Methanococcus maripaludis (strain DSM 14266

Query: 3 YLENFFE 9
Y ENFFE
Sbjct: 274 YTENFFE 280


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 RHYLENFF 8
+HYL FF
Sbjct: 318 KHYLSVFF 325


>sp|Y1113_METJA|PUTATIVE glycosyltransferase MJ1113|Methanocaldococcus jannaschii (strain

Query: 2 HYLENFFEY 10
HY N F Y
Sbjct: 3 HYFINLFTY 11


>sp|SUCC_METJA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Methanocaldococcus jannaschii

Query: 1 RHYLENFFEY 10
RH E F EY
Sbjct: 215 RHNYEEFEEY 224


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RHYLENF 7
R Y+ENF
Sbjct: 21 RRYIENF 27




172|SequenceR|865|856|PTLLFRHYLE

>sp|NARB_HALMT|PUTATIVE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 PTLLFRH 7
PTLL RH
Sbjct: 120 PTLLVRH 126


>sp|RFRNP_AERPE|RNA-FREE ribonuclease P|Aeropyrum pernix (strain ATCC 700893

Query: 1 PTLLFRHYLE 10
P +FR Y+E
Sbjct: 99 PAAMFRRYVE 108


>sp|SYDND_METKA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 FRHYLE 10
FRHYLE
Sbjct: 382 FRHYLE 387


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 1 PTLLFRH 7
P L+FRH
Sbjct: 472 PKLVFRH 478


>sp|Y683_METJA|UNCHARACTERIZED protein MJ0683|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FRHYLE 10
F+HYLE
Sbjct: 214 FKHYLE 219


>sp|DAPAL_THEON|UNCHARACTERIZED DapA-like lyase TON_0506|Thermococcus onnurineus (strain NA1)

Query: 2 TLLFRHY 8
T LFRHY
Sbjct: 111 TALFRHY 117


>sp|PGK2_METJA|2-PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTLLFRHYLE 10
PTLL YLE
Sbjct: 200 PTLLKDKYLE 209


>sp|WTPB_ARCFU|MOLYBDATE/TUNGSTATE transport system permease protein|Archaeoglobus fulgidus (strain

Query: 1 PTLLFRHYL 9
PTL++ YL
Sbjct: 214 PTLIYERYL 222


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 TLLFRHY 8
TL+F HY
Sbjct: 208 TLVFMHY 214


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 TLLFRHY 8
TL+F HY
Sbjct: 212 TLVFMHY 218


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TLLFRHY 8
TL+F HY
Sbjct: 208 TLVFMHY 214


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 TLLFRHY 8
TL+F HY
Sbjct: 208 TLVFMHY 214


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 TLLFRHY 8
TL+F HY
Sbjct: 215 TLVFMHY 221


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 TLLFRHY 8
TL+F HY
Sbjct: 208 TLVFMHY 214


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 TLLFRHY 8
TL+F HY
Sbjct: 213 TLVFMHY 219




173|SequenceR|870|861|KMNVKPTLLF

>sp|GATD_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus abyssi (strain GE5 /

Query: 3 NVKPTLLF 10
NVKP LLF
Sbjct: 135 NVKPKLLF 142


>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KMNVKPTLLF 10
K+NVKP L++
Sbjct: 102 KLNVKPALIY 111


>sp|GATD_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus horikoshii (strain ATCC

Query: 3 NVKPTLLF 10
N+KP LLF
Sbjct: 135 NIKPKLLF 142


>sp|GATD_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus furiosus (strain ATCC 43587

Query: 3 NVKPTLLF 10
N+KP LLF
Sbjct: 135 NIKPKLLF 142


>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KMNVKPTLLF 10
KMN+KPT+
Sbjct: 185 KMNLKPTIFL 194


>sp|LYSK_SULAC|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KMNVKPTLL 9
K N KPT+L
Sbjct: 278 KENYKPTIL 286


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 3 NVKPTLL 9
N+KPTL+
Sbjct: 494 NIKPTLI 500




174|SequenceR|875|866|QLCLCKMNVK

>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 1 QLCLCKMNVK 10
++CLC M ++
Sbjct: 209 RMCLCNMAIE 218


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LCKMNVK 10
+CKMN K
Sbjct: 466 ICKMNAK 472


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 LCKMNVK 10
+CKMN K
Sbjct: 466 ICKMNAK 472


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 LCKMNVK 10
+CKMN K
Sbjct: 466 ICKMNAK 472


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 LCKMNVK 10
+CKMN K
Sbjct: 466 ICKMNAK 472


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 LCKMNVK 10
+CKMN K
Sbjct: 466 ICKMNAK 472


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 LCKMNVK 10
+CKMN K
Sbjct: 466 ICKMNAK 472


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 LCKMNVK 10
+CKMN K
Sbjct: 466 ICKMNAK 472




175|SequenceR|880|871|VIALAQLCLC

>sp|Y1451_METJA|UNCHARACTERIZED protein MJ1451|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VIALAQLCL 9
+IALAQ C+
Sbjct: 144 IIALAQGCM 152


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 IALAQLCLC 10
I LAQ C C
Sbjct: 1043 IPLAQRCSC 1051




176|SequenceR|885|876|HCRGYVIALA

>sp|RS19_METVS|SMALL ribosomal subunit protein uS19|Methanococcus vannielii (strain ATCC

Query: 1 HCRGYVI 7
HCR +VI
Sbjct: 94 HCRDFVI 100


>sp|RS19_METMP|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 1 HCRGYVI 7
HCR +VI
Sbjct: 95 HCRDFVI 101


>sp|RS19_METM7|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C7

Query: 1 HCRGYVI 7
HCR +VI
Sbjct: 95 HCRDFVI 101


>sp|RS19_METM6|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C6

Query: 1 HCRGYVI 7
HCR +VI
Sbjct: 95 HCRDFVI 101


>sp|RS19_METM5|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C5

Query: 1 HCRGYVI 7
HCR +VI
Sbjct: 95 HCRDFVI 101


>sp|RS19_METJA|SMALL ribosomal subunit protein uS19|Methanocaldococcus jannaschii

Query: 1 HCRGYVI 7
HCR +VI
Sbjct: 86 HCRDFVI 92


>sp|RS19_META3|SMALL ribosomal subunit protein uS19|Methanococcus aeolicus (strain ATCC

Query: 1 HCRGYVI 7
HCR +VI
Sbjct: 96 HCRDFVI 102


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 4 GYVIALA 10
GY++ALA
Sbjct: 44 GYIVALA 50


>sp|PYRB_HYPBU|ASPARTATE carbamoyltransferase catalytic subunit|Hyperthermus butylicus

Query: 4 GYVIALA 10
GY++ALA
Sbjct: 48 GYIVALA 54


>sp|SERB_METJA|PHOSPHOSERINE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RGYVIAL 9
RGYV+A+
Sbjct: 91 RGYVVAV 97




177|SequenceR|890|881|PGIEEHCRGY

>sp|SERB_HALS3|PHOSPHOSERINE phosphatase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PGIEEHC 7
PG++ HC
Sbjct: 185 PGVDAHC 191


>sp|Y1243_METJA|UPF0251 protein MJ1243|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GIEEHCRGY 10
GI++HCR +
Sbjct: 111 GIKKHCRTW 119


>sp|DPHB_SULTO|DIPHTHINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PGIEEHC 7
PGI HC
Sbjct: 111 PGISVHC 117


>sp|DPHB_SACS2|DIPHTHINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PGIEEHC 7
PGI HC
Sbjct: 114 PGISVHC 120


>sp|DPHB_SACI7|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PGIEEHC 7
PGI HC
Sbjct: 114 PGISVHC 120


>sp|DPHB_SACI6|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PGIEEHC 7
PGI HC
Sbjct: 114 PGISVHC 120


>sp|DPHB_SACI4|DIPHTHINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PGIEEHC 7
PGI HC
Sbjct: 114 PGISVHC 120


>sp|DPHB_SACI3|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PGIEEHC 7
PGI HC
Sbjct: 114 PGISVHC 120


>sp|DPHB_SACI2|DIPHTHINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PGIEEHC 7
PGI HC
Sbjct: 114 PGISVHC 120


>sp|DPHB_SACI1|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PGIEEHC 7
PGI HC
Sbjct: 114 PGISVHC 120


>sp|Y3409_METJA|UNCHARACTERIZED protein MJECS09|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IEEHCRG 9
+E HC+G
Sbjct: 39 LENHCKG 45


>sp|Y857_METTH|PROTEIN MTH_857|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GIEEHCRG 9
IEEH RG
Sbjct: 21 AIEEHLRG 28


>sp|ADHS_HALSA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PGIEEH 6
PG++EH
Sbjct: 148 PGVDEH 153


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGIEEHCRGY 10
P +++H R Y
Sbjct: 208 PAVQDHKRAY 217


>sp|LIPA_AERPE|LIPOYL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GIEEHCR 8
G+EEH R
Sbjct: 138 GVEEHVR 144


>sp|DPHB_METS5|DIPHTHINE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PGIEEHC 7
PG+ HC
Sbjct: 112 PGVSVHC 118


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 3 IEEHCRGY 10
+E H RGY
Sbjct: 145 VENHFRGY 152


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGIEEHCRGY 10
P +++H R Y
Sbjct: 210 PAVQDHKRAY 219


>sp|Y1614_METAC|MACRO domain-containing protein MA_1614|Methanosarcina acetivorans

Query: 1 PGIEEHCR 8
PG+ E CR
Sbjct: 68 PGLLEECR 75


>sp|PUR2_METMA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGIEEHCRGY 10
P +++H R Y
Sbjct: 210 PAVQDHKRAY 219


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 3 IEEHCRGY 10
+E H RGY
Sbjct: 145 VEHHLRGY 152


>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GIEEHCR 8
G+EE CR
Sbjct: 119 GLEEGCR 125


>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain ATCC

Query: 4 EEHCRGY 10
+E CRGY
Sbjct: 178 QERCRGY 184


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 2 GIEEHCR 8
G+EE CR
Sbjct: 376 GVEEPCR 382




178|SequenceR|895|886|RTDTFPGIEE

>sp|Y516_METST|UPF0173 metal-dependent hydrolase Msp_0516|Methanosphaera stadtmanae

Query: 3 DTFPGIEE 10
+TFPGIE+
Sbjct: 197 NTFPGIEQ 204


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 FPGIEE 10
FPG+EE
Sbjct: 355 FPGVEE 360


>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RTDTFPGI 8
RTD F GI
Sbjct: 245 RTDPFTGI 252


>sp|MUTS2_PYRFU|DNA-BINDING protein MutS2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 TFPGIEE 10
FPG+EE
Sbjct: 366 NFPGVEE 372


>sp|Y1666_METM7|UPF0285 protein MmarC7_1666|Methanococcus maripaludis (strain C7 /

Query: 2 TDTFPGIEE 10
TD++ G+E+
Sbjct: 216 TDSYKGVED 224


>sp|Y642_METMP|UPF0285 protein MMP0642|Methanococcus maripaludis (strain DSM 14266

Query: 2 TDTFPGIEE 10
TD++ G+E+
Sbjct: 216 TDSYKGVED 224


>sp|Y1551_METVS|UPF0285 protein Mevan_1551|Methanococcus vannielii (strain ATCC 35089

Query: 2 TDTFPGIEE 10
TD++ G+E+
Sbjct: 216 TDSYKGVED 224


>sp|COBQ_METPE|PROBABLE cobyric acid synthase|Methanosphaerula palustris (strain ATCC

Query: 1 RTDTFPGIEE 10
R TF GIEE
Sbjct: 443 RGLTFTGIEE 452


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 TDTFPGIE 9
TD FPG +
Sbjct: 299 TDIFPGYD 306


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 TDTFPGIE 9
TD FPG +
Sbjct: 299 TDIFPGYD 306


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TDTFPGIE 9
TD FPG +
Sbjct: 299 TDIFPGYD 306


>sp|Y1421_METMJ|UPF0173 metal-dependent hydrolase Memar_1421|Methanoculleus marisnigri

Query: 3 DTFPGIEE 10
DTFP I +
Sbjct: 182 DTFPAIRQ 189


>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TDTFPGIE 9
TD FPG +
Sbjct: 299 TDIFPGYD 306


>sp|BAX1_ARCFU|ENDONUCLEASE Bax1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DTFPGIEE 10
D FP +EE
Sbjct: 258 DLFPDVEE 265




179|SequenceR|900|891|MGIIYRTDTF

>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum (strain

Query: 2 GIIYRTDTF 10
G+I R DTF
Sbjct: 357 GVIVRADTF 365


>sp|IF2P_PYRCJ|PROBABLE translation initiation factor IF-2|Pyrobaculum calidifontis (strain

Query: 2 GIIYRTDTF 10
G+I R DTF
Sbjct: 359 GVIVRADTF 367


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 2 GIIYRTDTF 10
G+I R DTF
Sbjct: 358 GVIVRADTF 366


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 2 GIIYRTDTF 10
G+I R DTF
Sbjct: 358 GVIVRADTF 366


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 2 GIIYRTDTF 10
G+I R DTF
Sbjct: 357 GVIARADTF 365


>sp|Y796_METKA|UPF0288 protein MK0796|Methanopyrus kandleri (strain AV19 /

Query: 3 IIYRTDTF 10
I +RTDTF
Sbjct: 230 IKFRTDTF 237


>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri (strain

Query: 2 GIIYRTDTF 10
GI++R D F
Sbjct: 225 GIVFRDDEF 233


>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 2 GIIYRTDTF 10
GI++R +TF
Sbjct: 243 GILFRDNTF 251


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 1 MGIIYRTDTF 10
MG+I + DT
Sbjct: 742 MGVIIKADTL 751


>sp|TBPD_HALSA|TATA-BOX-BINDING protein D|Halobacterium salinarum (strain ATCC 700922

Query: 2 GIIYRTD 8
G+IYR D
Sbjct: 44 GVIYRLD 50


>sp|K1PF_HALVD|1-PHOSPHOFRUCTOKINASE volcanii (strain ATCC 29605

Query: 2 GIIYRTD 8
G+++RTD
Sbjct: 24 GVVHRTD 30




180|SequenceR|905|896|TCRELMGIIY

>sp|Y4020_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 CRELMGIIY 10
CRE +GI++
Sbjct: 119 CRETVGIVF 127


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 RELMGIIY 10
REL+G++Y
Sbjct: 1699 RELLGVVY 1706


>sp|NIKR_HALWD|PUTATIVE nickel-responsive regulator|Haloquadratum walsbyi (strain DSM

Query: 3 RELMGII 9
RELMGI+
Sbjct: 51 RELMGIV 57


>sp|NIKR_NATPD|PUTATIVE nickel-responsive regulator|Natronomonas pharaonis (strain ATCC

Query: 3 RELMGII 9
RELMG++
Sbjct: 51 RELMGVV 57


>sp|NIKR_HALSA|PUTATIVE nickel-responsive regulator|Halobacterium salinarum (strain ATCC

Query: 3 RELMGII 9
RELMG++
Sbjct: 51 RELMGVV 57


>sp|NIKR_HALS3|PUTATIVE nickel-responsive regulator|Halobacterium salinarum (strain ATCC

Query: 3 RELMGII 9
RELMG++
Sbjct: 51 RELMGVV 57


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 CRELMGIIY 10
CRE+ +IY
Sbjct: 377 CREVADLIY 385


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 2 CRELMGII 9
CRE GII
Sbjct: 4 CRECYGII 11


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 TCRELMGII 9
T REL G+I
Sbjct: 746 TIRELRGVI 754


>sp|PYRH_METBU|URIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TCRELMGII 9
T +EL+GI+
Sbjct: 162 TAKELVGIV 170




181|SequenceR|910|901|RELKDTCREL

>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 3 LKDTCREL 10
KD CREL
Sbjct: 327 FKDECREL 334


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RELKDTCREL 10
R++ D CRE+
Sbjct: 259 RKIVDICREM 268


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 RELKDTCR 8
+ELKD C+
Sbjct: 199 KELKDNCK 206


>sp|T1S1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 2 ELKDTCREL 10
ELKD C+++
Sbjct: 24 ELKDVCKKI 32


>sp|G1PDH_METBF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina barkeri (strain Fusaro /

Query: 2 ELKDTCREL 10
E+ D CR+L
Sbjct: 28 EIGDVCRDL 36


>sp|G1PDH_METAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina acetivorans (strain ATCC

Query: 2 ELKDTCREL 10
E+ D CR+L
Sbjct: 28 EIGDVCRDL 36


>sp|CAS1C_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RELKDTCREL 10
RE++ CR+L
Sbjct: 247 REVRYACRDL 256


>sp|G1PDH_METMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ELKDTCREL 10
E+ D CR+L
Sbjct: 28 EVGDVCRDL 36


>sp|FLPA_METJA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanocaldococcus jannaschii

Query: 1 RELKDTCRE 9
REL D C E
Sbjct: 112 RELLDACAE 120


>sp|TPIS_METKA|TRIOSEPHOSPHATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 2 ELKDTCR 8
+LKD CR
Sbjct: 105 DLKDVCR 111


>sp|Y640_METJA|UNCHARACTERIZED protein MJ0640|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KDTCREL 10
KD CRE+
Sbjct: 109 KDICREV 115


>sp|RPO3_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum islandicum (strain DSM 4184

Query: 2 ELKDTCREL 10
E KD C+EL
Sbjct: 177 ECKDICKEL 185


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RELKDTCREL 10
RE+ D REL
Sbjct: 70 REIADKAREL 79


>sp|COMC_METJA|L-SULFOLACTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELKDTCREL 10
+LK+ C EL
Sbjct: 327 QLKEICNEL 335


>sp|RL30_METHJ|LARGE ribosomal subunit protein uL30|Methanospirillum hungatei JF-1

Query: 1 RELKDTCREL 10
RE+KDT + L
Sbjct: 15 REIKDTLKML 24


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 2 ELKDTCREL 10
E +DT REL
Sbjct: 369 EFEDTVREL 377


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ELKDTCREL 10
E+K+TC+ L
Sbjct: 95 EIKETCKAL 103


>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ELKDTCREL 10
E+K+TC+ L
Sbjct: 95 EIKETCKTL 103


>sp|G3PP_METKA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 RELKDTCREL 10
REL D REL
Sbjct: 221 RELLDVVREL 230




182|SequenceR|915|906|LILRDRELKD

>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LILRDRELKD 10
+I RDR LKD
Sbjct: 356 VIRRDRPLKD 365


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LILRDRELKD 10
L+ RDR L+D
Sbjct: 356 LVRRDRPLRD 365


>sp|PGP_SULTO|PHOSPHOGLYCOLATE phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LILRDRELK 9
+ILRD+E+K
Sbjct: 67 IILRDKEIK 75


>sp|BTUCA_HALSA|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 2 ILRDRELK 9
+LRDRE++
Sbjct: 360 LLRDREVR 367


>sp|BTUCA_HALS3|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 2 ILRDRELK 9
+LRDRE++
Sbjct: 360 LLRDREVR 367


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LILRDRELK 9
++LRDR +K
Sbjct: 69 VVLRDRSIK 77


>sp|RL29_METBF|LARGE ribosomal subunit protein uL29|Methanosarcina barkeri (strain

Query: 2 ILRDRELKD 10
ILR RE++D
Sbjct: 3 ILRSREIRD 11


>sp|SYDND_META3|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LILRDRE 7
+ILRDRE
Sbjct: 43 IILRDRE 49


>sp|Y704_METJA|UNCHARACTERIZED protein MJ0704|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LILRDRELKD 10
LILRD+++ D
Sbjct: 170 LILRDKDIGD 179


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LILRDRELK 9
++LRDRE K
Sbjct: 43 VVLRDREGK 51


>sp|SYDND_METVS|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LILRDRE 7
+ILRDRE
Sbjct: 43 IILRDRE 49


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LILRDRELK 9
L+LRD +LK
Sbjct: 942 LVLRDNQLK 950


>sp|AGL12_HALVD|LOW-SALT glycan biosynthesis protein Agl12|Haloferax volcanii (strain ATCC

Query: 3 LRDRELKD 10
+RDREL D
Sbjct: 59 IRDRELVD 66


>sp|SYDND_METM5|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C5 /

Query: 1 LILRDRE 7
+ILRDRE
Sbjct: 43 VILRDRE 49


>sp|SYDND_METAC|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LILRDRELK 9
++LRDRE K
Sbjct: 43 VVLRDREGK 51


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 1 LILRDRELKD 10
+I +DREL++
Sbjct: 66 IIYKDRELRE 75


>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 ILRDREL 8
ILRD+EL
Sbjct: 73 ILRDKEL 79


>sp|DCDB_NANEQ|DCTP deaminase, dUMP-forming|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LILRDRELKD 10
++L DRE+K+
Sbjct: 1 MLLNDREIKE 10


>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LILRDRE 7
+ILRDRE
Sbjct: 43 VILRDRE 49


>sp|SYDND_METM6|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C6 /

Query: 1 LILRDRE 7
+ILRDRE
Sbjct: 43 VILRDRE 49


>sp|SYDND_METM7|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C7 /

Query: 1 LILRDRE 7
+ILRDRE
Sbjct: 43 VILRDRE 49


>sp|SYDND_METMA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LILRDRELK 9
++LRDRE K
Sbjct: 43 VVLRDREGK 51




183|SequenceR|920|911|LKNLFLILRD

>sp|SYN_THEKO|ASPARAGINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KNLFLILRD 10
K +F++LRD
Sbjct: 33 KKVFIVLRD 41


>sp|SYN_THEGJ|ASPARAGINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KNLFLILRD 10
K +F++LRD
Sbjct: 33 KKVFIVLRD 41


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LKNLFLILR 9
+KN FL+LR
Sbjct: 324 MKNPFLVLR 332


>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNLFLILRD 10
K LFL LRD
Sbjct: 101 KKLFLKLRD 109


>sp|SYDND_META3|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KNLFLILRD 10
K +F+ILRD
Sbjct: 39 KLVFIILRD 47


>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNLFLILRD 10
K +F+ILRD
Sbjct: 39 KIIFVILRD 47


>sp|Y844_ARCFU|UNCHARACTERIZED protein AF_0844|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKNLFLILRD 10
L+N+FL+L++
Sbjct: 99 LQNMFLLLKE 108




184|SequenceR|925|916|KKNLILKNLF

>sp|COFE_METMP|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain DSM

Query: 1 KKNLILKN 8
+KN+ILKN
Sbjct: 52 EKNVILKN 59




185|SequenceR|930|921|LDKVNKKNLI

>sp|BIOW_META3|6-CARBOXYHEXANOATE--COA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LDKVNKKNLI 10
+DK+NKK++I
Sbjct: 55 IDKINKKDII 64


>sp|DGGGP_SULTO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LDKVNKKN 8
+DK+NK N
Sbjct: 64 IDKINKPN 71


>sp|YSO2_ACIAM|UNCHARACTERIZED transporter in sor 3'region|Acidianus ambivalens (Desulfurolobus

Query: 3 KVNKKNLI 10
K+NK N+I
Sbjct: 240 KINKSNII 247


>sp|RNP1_PYRFU|RIBONUCLEASE P protein component 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KVNKKNLI 10
+VNKKN++
Sbjct: 37 RVNKKNIV 44


>sp|Y700_METJA|UNCHARACTERIZED MscS family protein MJ0700|Methanocaldococcus jannaschii (strain

Query: 1 LDKVNKKN 8
L+KVNK+N
Sbjct: 295 LEKVNKEN 302


>sp|DGGGP_META3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LDKVNKKN 8
+DK+NK N
Sbjct: 67 IDKINKPN 74




186|SequenceR|935|926|GNSDMLDKVN

>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 GNSDMLDKV 9
G++DML+KV
Sbjct: 162 GHADMLEKV 170


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GNSDMLDKV 9
G++DML+KV
Sbjct: 163 GHADMLEKV 171


>sp|NEP1_STAMF|RIBOSOMAL RNA small subunit methyltransferase|Staphylothermus marinus (strain

Query: 3 SDMLDKVN 10
SD+L+K+N
Sbjct: 144 SDLLEKIN 151


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NSDMLDK 8
NSD++DK
Sbjct: 383 NSDLIDK 389


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NSDMLDK 8
NSD++DK
Sbjct: 383 NSDLIDK 389


>sp|SPEE_PYRAR|POLYAMINE aminopropyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GNSDMLDKVN 10
GN+ +L KVN
Sbjct: 16 GNTSLLIKVN 25


>sp|SPEE_PYRNV|POLYAMINE aminopropyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GNSDMLDKVN 10
GNS +L K+N
Sbjct: 16 GNSALLVKIN 25


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 NSDMLDKV 9
N D++DKV
Sbjct: 37 NKDIIDKV 44


>sp|SPEE_PYRCJ|POLYAMINE aminopropyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GNSDMLDKVN 10
GN+ +L K+N
Sbjct: 16 GNTSLLIKIN 25


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 2 NSDMLDKVN 10
N D +DK+N
Sbjct: 137 NEDEIDKIN 145




187|SequenceR|940|931|VLIRIGNSDM

>sp|PROB_NATPD|GLUTAMATE 5-kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 IRIGNSDM 10
IRIG++DM
Sbjct: 165 IRIGDNDM 172


>sp|RL1_AERPE|LARGE ribosomal subunit protein uL1|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLIRIGNSDM 10
V+ RIG DM
Sbjct: 164 VMARIGTEDM 173


>sp|Y940_METJA|TPR repeat-containing protein MJ0940|Methanocaldococcus jannaschii

Query: 1 VLIRIGNSD 9
+L RIGN D
Sbjct: 195 ILNRIGNCD 203


>sp|RS5_IGNH4|SMALL ribosomal subunit protein uS5|Ignicoccus hospitalis (strain

Query: 1 VLIRIGNSD 9
VL+ IGN D
Sbjct: 75 VLVVIGNED 83


>sp|PDXS_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Picrophilus torridus (strain

Query: 1 VLIRIGNSDM 10
VL+R+ SDM
Sbjct: 182 VLLRLNESDM 191


>sp|MBD_THEAC|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma acidophilum (strain

Query: 2 LIRIGNSDM 10
L++IG +DM
Sbjct: 293 LLKIGENDM 301


>sp|RL1_HYPBU|LARGE ribosomal subunit protein uL1|Hyperthermus butylicus (strain DSM

Query: 1 VLIRIGNSDM 10
V+ R+G DM
Sbjct: 163 VMCRVGTEDM 172


>sp|GPM_THEAC|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Thermoplasma acidophilum (strain ATCC

Query: 1 VLIRIGNSDM 10
+LIR G SD+
Sbjct: 5 ILIRHGESDI 14




188|SequenceR|945|936|LTLLDVLIRI

***** No hits found ******


189|SequenceR|950|941|VHLHALTLLD

>sp|G3P_METHJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VHLHALTL 8
+H+HA+T+
Sbjct: 219 MHMHAITI 226


>sp|COFH_HALMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Haloarcula marismortui (strain ATCC

Query: 1 VHLHALT 7
+HLH++T
Sbjct: 200 IHLHSMT 206


>sp|HEM1_METST|GLUTAMYL-TRNA reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HLHALTLLD 10
HLH + +LD
Sbjct: 247 HLHDMIMLD 255




190|SequenceR|955|946|VTARSVHLHA

***** No hits found ******


191|SequenceR|960|951|NSQLPVTARS

***** No hits found ******


192|SequenceR|965|956|AAEIVNSQLP

>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 AEIVNSQLP 10
AEI+NS +P
Sbjct: 226 AEILNSSIP 234


>sp|TRUA_METAR|TRNA pseudouridine synthase A|Methanocella arvoryzae (strain DSM 22066

Query: 1 AAEIVNSQLP 10
A I+NS+LP
Sbjct: 74 APRIINSKLP 83


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 1 AAEIVNSQLP 10
A EI+N +LP
Sbjct: 236 AKEILNKKLP 245




193|SequenceR|970|961|RKMDPAAEIV

>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 RKMDPAAEIV 10
RKM PAA+++
Sbjct: 600 RKMSPAAQVL 609


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 RKMDPAAEIV 10
RKM PAA+++
Sbjct: 607 RKMSPAAQVL 616


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 RKMDPAAEIV 10
RKM PAA+++
Sbjct: 601 RKMSPAAQVL 610


>sp|Y1154_METTH|UNIVERSAL stress protein MTH_1154|Methanothermobacter thermautotrophicus

Query: 1 RKMDPAAEIV 10
R+ DPA EIV
Sbjct: 91 REGDPADEIV 100


>sp|IPYR_THEVO|INORGANIC pyrophosphatase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KMDPAAEIV 10
K+DPA+ IV
Sbjct: 109 KVDPASSIV 117


>sp|PURA_THEAC|ADENYLOSUCCINATE synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RKMDPAAEIV 10
RK++PA +I+
Sbjct: 94 RKINPALKII 103


>sp|AROD_THEAC|3-DEHYDROQUINATE dehydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RKMDPAAEI 9
RKM PA +I
Sbjct: 97 RKMAPAVDI 105




194|SequenceR|975|966|EKESERKMDP

>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 EKESERKMDP 10
EK ERKM P
Sbjct: 598 EKAKERKMSP 607


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EKESERKMDP 10
EK ERKM P
Sbjct: 658 EKAKERKMKP 667


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 EKESERKMDP 10
EK ERKM P
Sbjct: 669 EKAKERKMKP 678


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 EKESERKMDP 10
EK ERKM P
Sbjct: 660 EKAKERKMKP 669


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 EKESERKMDP 10
EK ERKM P
Sbjct: 657 EKAKERKMKP 666


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 EKESERKMDP 10
EK ERKM P
Sbjct: 697 EKARERKMSP 706


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 EKESERKMDP 10
EK +RKM P
Sbjct: 571 EKAGDRKMKP 580


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 EKESERKMDP 10
EK +RKM P
Sbjct: 576 EKAGDRKMKP 585


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 EKESERKMDP 10
EK +RKM P
Sbjct: 570 EKAGDRKMKP 579


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 2 KESERKMDP 10
KESE +DP
Sbjct: 335 KESESGVDP 343


>sp|PSB_METBF|PROTEASOME subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 2 KESERKMDP 10
KE+ R++DP
Sbjct: 191 KEAFRRLDP 199




195|SequenceR|980|971|NGFYWEKESE

>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGFYWEKESE 10
N WEKE+E
Sbjct: 361 NKLAWEKETE 370


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NGFYWEKE 8
NGFYW E
Sbjct: 362 NGFYWTVE 369


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 NGFYWEKE 8
NG+YW +E
Sbjct: 360 NGYYWTEE 367


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NGFYWEKES 9
N YWE+E+
Sbjct: 153 NTVYWEEET 161


>sp|KAD6_METM7|PUTATIVE adenylate kinase|Methanococcus maripaludis (strain C7 /

Query: 1 NGFYWEKESE 10
NG Y EK+ E
Sbjct: 43 NGLYLEKDIE 52


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NGFYWEKESE 10
NG+ WE++ E
Sbjct: 160 NGYGWERDLE 169


>sp|Y2328_HALVD|UNCHARACTERIZED isochorismatase family protein HVO_2328|Haloferax volcanii

Query: 2 GFYWEKESE 10
GF W+ E+E
Sbjct: 72 GFAWKPEAE 80


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NGFYWEKE 8
NGF WE++
Sbjct: 157 NGFGWEED 164


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NGFYWEKESE 10
NG+ WE++ E
Sbjct: 548 NGYGWERDLE 557


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 NGFYWEKESE 10
NG+ +EKE E
Sbjct: 113 NGYIYEKEIE 122


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NGFYWEKESE 10
NG+ +EKE E
Sbjct: 113 NGYIYEKEIE 122


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NGFYWEKESE 10
NG+ +EKE E
Sbjct: 113 NGYIYEKEIE 122


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 NGFYWEKESE 10
NG+ +EKE E
Sbjct: 113 NGYIYEKEIE 122


>sp|Y238_METTH|UNCHARACTERIZED protein MTH_238|Methanothermobacter thermautotrophicus (strain

Query: 3 FYWEKESE 10
FYW+ E
Sbjct: 33 FYWQHRGE 40


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NGFYWEKESE 10
NG+ +EKE E
Sbjct: 115 NGYIYEKEIE 124


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGFYWEKESE 10
NG+ +EKE E
Sbjct: 113 NGYIYEKEIE 122


>sp|VHCB_METVO|POLYFERREDOXIN protein VhcB|Methanococcus voltae

Query: 1 NGFYWEKE 8
NG W++E
Sbjct: 23 NGISWDRE 30


>sp|RRP4_THEAM|EXOSOME complex component Rrp4|Thermosphaera aggregans (strain DSM 11486

Query: 1 NGFYWEK 7
NGF W K
Sbjct: 193 NGFVWLK 199


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NGFYWEKESE 10
+ F WEK+ E
Sbjct: 376 DNFDWEKQFE 385


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 NGFYWEKESE 10
NG+ WE++ E
Sbjct: 594 NGYGWEEDLE 603


>sp|RS8_METB6|SMALL ribosomal subunit protein uS8|Methanoregula boonei (strain DSM

Query: 4 YWEKE 8
YWEK+
Sbjct: 88 YWEKQ 92


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NGFYWEKES 9
NGF EK+S
Sbjct: 456 NGFIKEKDS 464


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 NGFYWEK 7
+G YW+K
Sbjct: 4146 SGAYWDK 4152


>sp|MRE11_NANEQ|DNA double-strand break repair protein|Nanoarchaeum equitans (strain

Query: 1 NGFYWEKES 9
+G YW KES
Sbjct: 85 DGKYWLKES 93




196|SequenceR|985|976|REKDANGFYW

>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 EKDANGFY 9
EKDA+GF+
Sbjct: 110 EKDADGFH 117


>sp|FOLD_METBF|BIFUNCTIONAL protein FolD|Methanosarcina barkeri (strain Fusaro /

Query: 2 EKDANGFY 9
EKDA+GF+
Sbjct: 122 EKDADGFH 129


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 2 EKDANGFYW 10
EK A+G YW
Sbjct: 6 EKIADGLYW 14


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KDANGFYW 10
++ NGFYW
Sbjct: 359 QNINGFYW 366


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 REKDANGFYW 10
R K A+G YW
Sbjct: 8 RSKIADGVYW 17


>sp|Y1072_ARCFU|UPF0150 protein AF_1072|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EKDANGFY 9
EKD +G+Y
Sbjct: 8 EKDEDGYY 15


>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 EKDANGF 8
E+D+NGF
Sbjct: 174 EQDSNGF 180


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 2 EKDANGF 8
E+D+NGF
Sbjct: 174 EQDSNGF 180


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25 /

Query: 2 EKDANGF 8
E+D+NGF
Sbjct: 174 EQDSNGF 180


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 2 EKDANGF 8
E+D+NGF
Sbjct: 174 EQDSNGF 180


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 EKDANGF 8
E+D+NGF
Sbjct: 174 EQDSNGF 180


>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 EKDANGF 8
E+D+NGF
Sbjct: 174 EQDSNGF 180


>sp|FOLD_METPE|BIFUNCTIONAL protein FolD|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 EKDANGFY 9
EKD +GF+
Sbjct: 110 EKDVDGFH 117


>sp|FOLD_METMJ|BIFUNCTIONAL protein FolD|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EKDANGFY 9
EKD +GF+
Sbjct: 110 EKDVDGFH 117


>sp|FOLD_METHJ|BIFUNCTIONAL protein FolD|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EKDANGFY 9
EKD +GF+
Sbjct: 110 EKDVDGFH 117


>sp|FOLD_METB6|BIFUNCTIONAL protein FolD|Methanoregula boonei (strain DSM 21154

Query: 2 EKDANGFY 9
EKD +GF+
Sbjct: 112 EKDVDGFH 119


>sp|MOAC_NATPD|PROBABLE cyclic pyranopterin monophosphate synthase|Natronomonas pharaonis

Query: 2 EKDANGFY 9
EKDA+G Y
Sbjct: 135 EKDADGQY 142


>sp|MOAC_HALSA|PROBABLE cyclic pyranopterin monophosphate synthase|Halobacterium salinarum

Query: 2 EKDANGFY 9
EKDA+G Y
Sbjct: 137 EKDADGQY 144


>sp|MOAC_HALS3|PROBABLE cyclic pyranopterin monophosphate synthase|Halobacterium salinarum

Query: 2 EKDANGFY 9
EKDA+G Y
Sbjct: 137 EKDADGQY 144


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 REKDANGFY 9
R DA+G+Y
Sbjct: 236 RSGDASGYY 244


>sp|THI4_HALMA|THIAMINE thiazole synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 REKDANGFY 9
R KD+ G Y
Sbjct: 103 RSKDSEGLY 111


>sp|MOAC_SACS2|PROBABLE cyclic pyranopterin monophosphate synthase|Saccharolobus

Query: 2 EKDANGFY 9
EKD NG Y
Sbjct: 124 EKDENGKY 131


>sp|MOAC_THEKO|PROBABLE cyclic pyranopterin monophosphate synthase|Thermococcus

Query: 2 EKDANGFY 9
EKD NG Y
Sbjct: 131 EKDENGQY 138


>sp|MOAC_SULTO|PROBABLE cyclic pyranopterin monophosphate synthase|Sulfurisphaera tokodaii

Query: 2 EKDANGFY 9
EKD NG Y
Sbjct: 123 EKDENGQY 130


>sp|MOAC_PYRAE|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrobaculum aerophilum

Query: 2 EKDANGFY 9
EKD NG Y
Sbjct: 226 EKDENGQY 233


>sp|MOAC_METPE|PROBABLE cyclic pyranopterin monophosphate synthase|Methanosphaerula

Query: 2 EKDANGFY 9
EKD NG Y
Sbjct: 131 EKDENGQY 138


>sp|MOAC_METB6|PROBABLE cyclic pyranopterin monophosphate synthase|Methanoregula boonei

Query: 2 EKDANGFY 9
EKD NG Y
Sbjct: 131 EKDENGQY 138


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KDANGFY 9
KDA+GF+
Sbjct: 123 KDADGFH 129


>sp|FOLD_METBU|BIFUNCTIONAL protein FolD|Methanococcoides burtonii (strain DSM 6242

Query: 3 KDANGFY 9
KDA+GF+
Sbjct: 122 KDADGFH 128


>sp|FOLD_METAC|BIFUNCTIONAL protein FolD|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KDANGFY 9
KDA+GF+
Sbjct: 126 KDADGFH 132


>sp|TRPF2_METMA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KDANGF 8
KD+NGF
Sbjct: 194 KDSNGF 199


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 3 KDANGFYW 10
++ NG+YW
Sbjct: 357 QNINGYYW 364


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 2 EKDANGFYW 10
+K NG YW
Sbjct: 6 KKIGNGVYW 14


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 3 KDANGFY 9
KDA GF+
Sbjct: 194 KDAEGFF 200


>sp|Y2121_ARCFU|UNCHARACTERIZED protein AF_2121|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DANGFYW 10
D NGF W
Sbjct: 69 DTNGFIW 75


>sp|KTHY_METTH|PROBABLE thymidylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 4 DANGFY 9
D NGFY
Sbjct: 158 DKNGFY 163


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EKDANGF 8
EKD NG+
Sbjct: 118 EKDKNGY 124


>sp|TAW21_SACS2|TRNA 4-demethylwyosine(37)-methyltransferase Taw21|Saccharolobus

Query: 1 REKDANGFY 9
R +D NG Y
Sbjct: 58 RHRDVNGTY 66


>sp|MTBA_METAC|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina acetivorans (strain ATCC

Query: 2 EKDANGFYW 10
+ +A+G YW
Sbjct: 35 QMEASGAYW 43


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EKDANGFYW 10
EKD N +W
Sbjct: 247 EKDGNEEFW 255




197|SequenceR|990|981|GYPGSREKDA

>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 GYPGSR 6
GYPGSR
Sbjct: 56 GYPGSR 61


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 GYPGSR 6
GYPGSR
Sbjct: 56 GYPGSR 61


>sp|TRUD_PICTO|PROBABLE tRNA pseudouridine synthase D|Picrophilus torridus (strain ATCC

Query: 2 YPGSREKDA 10
YPG EKD+
Sbjct: 142 YPGDLEKDS 150


>sp|RISC_METTM|RIBOFLAVIN synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 GYPGSREKD 9
G PG EKD
Sbjct: 64 GMPGPEEKD 72


>sp|RISC_METTH|RIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GYPGSREKD 9
G PG EKD
Sbjct: 64 GMPGPEEKD 72


>sp|RISC_METJA|RIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYPGSREKD 9
G PG EKD
Sbjct: 65 GMPGKAEKD 73


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GYPGSREKDA 10
GYP S+ KD
Sbjct: 407 GYPVSKIKDV 416


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GYPGSREKDA 10
GYP + EKD+
Sbjct: 343 GYPDNPEKDS 352


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GYPGSREKDA 10
GYP + EKD+
Sbjct: 341 GYPENPEKDS 350


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain

Query: 1 GYPGSR 6
GYPG R
Sbjct: 54 GYPGKR 59


>sp|GLYA_HALWD|SERINE hydroxymethyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GYPGSR 6
GYPG R
Sbjct: 56 GYPGER 61


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 2 YPGSRE 7
YPG RE
Sbjct: 369 YPGGRE 374


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 2 YPGSRE 7
YPG RE
Sbjct: 366 YPGGRE 371


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC

Query: 1 GYPGSR 6
GYPG R
Sbjct: 56 GYPGER 61


>sp|GLYA_METPE|SERINE hydroxymethyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 GYPGSR 6
GYPG R
Sbjct: 54 GYPGKR 59


>sp|GLYA_HALLT|SERINE hydroxymethyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 GYPGSR 6
GYPG R
Sbjct: 56 GYPGER 61


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YPGSREKDA 10
YP RE+D
Sbjct: 296 YPDPRERDV 304


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 GYPGSR 6
GYPG R
Sbjct: 54 GYPGKR 59


>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 3 PGSREKDA 10
PG REK A
Sbjct: 49 PGQREKRA 56


>sp|TF2B2_THEKO|TRANSCRIPTION initiation factor IIB 2|Thermococcus kodakarensis (strain ATCC

Query: 3 PGSREKDA 10
PG REK A
Sbjct: 52 PGQREKRA 59




198|SequenceR|995|986|QMEHFGYPGS

>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 MEHFGYPGS 10
+ HFG PGS
Sbjct: 155 VSHFGVPGS 163


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 4 HFGYPG 9
H+GYPG
Sbjct: 273 HYGYPG 278


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus kandleri

Query: 1 QMEHFGYP 8
+ E FGYP
Sbjct: 259 EFESFGYP 266


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 1 QMEHFGYP 8
+MEHF P
Sbjct: 192 EMEHFSIP 199


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 2 MEHFGYPGS 10
+E FGY GS
Sbjct: 140 LEQFGYAGS 148


>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 3 EHFGYP 8
EHF YP
Sbjct: 255 EHFSYP 260


>sp|ISCS1_ARCFU|CYSTEINE desulfurase IscS 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EHFGYPGS 10
EHFG P S
Sbjct: 26 EHFGNPSS 33


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 5 FGYPG 9
FGYPG
Sbjct: 20 FGYPG 24


>sp|CH60_METMA|CHAPERONIN GroEL|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EHFGY 7
EHFGY
Sbjct: 473 EHFGY 477


>sp|F16PA_HALSA|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 700922

Query: 5 FGYPG 9
FGYPG
Sbjct: 213 FGYPG 217


>sp|F16PA_HALS3|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 29341

Query: 5 FGYPG 9
FGYPG
Sbjct: 213 FGYPG 217


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QMEHFG 6
+MEHFG
Sbjct: 273 EMEHFG 278


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 3 EHFGYP 8
EH+G+P
Sbjct: 335 EHYGWP 340


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 EHFGYP 8
EH+G+P
Sbjct: 332 EHYGWP 337


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 5 FGYPG 9
FGYPG
Sbjct: 20 FGYPG 24


>sp|GLYA_PYRAE|SERINE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QMEHFG 6
+MEHFG
Sbjct: 274 EMEHFG 279


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 EHFGYPGS 10
E FG+P S
Sbjct: 149 EKFGFPSS 156


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 5 FGYPG 9
FGYPG
Sbjct: 213 FGYPG 217


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 3 EHFGYPGS 10
EHF PG+
Sbjct: 257 EHFACPGT 264


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 4 HFGYPG 9
HF +PG
Sbjct: 423 HFAFPG 428


>sp|RL18_METHJ|LARGE ribosomal subunit protein uL18|Methanospirillum hungatei JF-1

Query: 1 QMEHFGYPGS 10
++ FGY GS
Sbjct: 66 ELRKFGYEGS 75


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 1 QMEHFGYP 8
Q +H+ YP
Sbjct: 83 QRKHYNYP 90


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 1 QMEHFGYP 8
Q +H+ YP
Sbjct: 83 QRKHYNYP 90


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 1 QMEHFGYP 8
Q +H+ YP
Sbjct: 83 QRKHYNYP 90


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 1 QMEHFGYP 8
Q +H+ YP
Sbjct: 83 QRKHYNYP 90


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 1 QMEHFGYP 8
Q +H+ YP
Sbjct: 83 QRKHYNYP 90


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 1 QMEHFGYP 8
Q +H+ YP
Sbjct: 83 QRKHYNYP 90


>sp|RL5_METHJ|LARGE ribosomal subunit protein uL5|Methanospirillum hungatei JF-1

Query: 3 EHFGYPG 9
EH YPG
Sbjct: 103 EHTDYPG 109


>sp|YB5B_METJA|UNCHARACTERIZED protein MJ1155.2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EHFGYP 8
++FGYP
Sbjct: 46 QYFGYP 51


>sp|SPSS_META3|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 MEHFGYP 8
+EH GYP
Sbjct: 131 VEHDGYP 137


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 MEHFGYPGS 10
++ FGY GS
Sbjct: 163 IQEFGYDGS 171


>sp|RL5_METBU|LARGE ribosomal subunit protein uL5|Methanococcoides burtonii (strain DSM

Query: 3 EHFGYPG 9
EH YPG
Sbjct: 104 EHTDYPG 110




199|SequenceR|1000|991|KTWLEQMEHF

>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 1 KTWLEQMEH 9
K+W+E EH
Sbjct: 103 KSWIEYAEH 111


>sp|TRPA_SACS2|TRYPTOPHAN synthase alpha chain|Saccharolobus solfataricus (strain ATCC

Query: 3 WLEQMEHF 10
W++Q+E+F
Sbjct: 88 WVDQLENF 95


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 1 KTWLEQMEH 9
K+W+E EH
Sbjct: 103 KSWVEYAEH 111


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 1 KTWLEQMEH 9
K+W+E EH
Sbjct: 103 KSWVEYAEH 111


>sp|AROC_HALMD|CHORISMATE synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 TWLEQMEH 9
TW E +EH
Sbjct: 170 TWEEMLEH 177


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 WLEQMEH 9
W EQ EH
Sbjct: 380 WTEQYEH 386


>sp|TRM56_THEAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma acidophilum

Query: 3 WLEQMEHF 10
W+++ +HF
Sbjct: 65 WIQEFKHF 72


>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TWLEQME 8
TW E+ME
Sbjct: 99 TWKEEME 105


>sp|TRPB1_ARCFU|TRYPTOPHAN synthase beta chain 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KTWLEQMEH 9
+ W+E EH
Sbjct: 182 RDWVESFEH 190


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TWLEQME 8
+WLEQ++
Sbjct: 349 SWLEQLD 355


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KTWLEQMEHF 10
K W+E EH+
Sbjct: 200 KKWVESQEHW 209


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 3 WLEQMEHF 10
WL++ E+F
Sbjct: 243 WLKETEYF 250


>sp|COFH_METBU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcoides burtonii (strain DSM

Query: 2 TWLEQMEH 9
TW +++EH
Sbjct: 214 TWEDRIEH 221




200|SequenceR|1005|996|ANLMGKTWLE

>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 MGKTWL 9
+GKTWL
Sbjct: 135 LGKTWL 140


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 4 MGKTWL 9
+GKTWL
Sbjct: 146 LGKTWL 151


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 MGKTWL 9
+GKTWL
Sbjct: 146 LGKTWL 151


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 ANLMGKTWL 9
A + GKTWL
Sbjct: 144 AVITGKTWL 152


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 ANLMGKTWL 9
A + GKTWL
Sbjct: 146 ALITGKTWL 154


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 3 LMGKTWL 9
+ GKTWL
Sbjct: 146 MTGKTWL 152


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 5 GKTWL 9
GKTWL
Sbjct: 448 GKTWL 452


>sp|LEUC_PYRAE|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 MGKTWL 9
+GKTW+
Sbjct: 146 LGKTWI 151


>sp|CETZ4_HALVD|TUBULIN-LIKE protein CetZ4|Haloferax volcanii (strain ATCC 29605

Query: 5 GKTWLE 10
G+TW+E
Sbjct: 313 GRTWVE 318


>sp|TATCO_HALVD|SEC-INDEPENDENT protein translocase protein TatCo|Haloferax volcanii (strain ATCC

Query: 2 NLMGKTWLE 10
NL+ + WLE
Sbjct: 384 NLVTRRWLE 392


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 5 GKTWLE 10
GK+W+E
Sbjct: 102 GKSWIE 107


>sp|RFCS_METM5|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C5 /

Query: 2 NLMGKTWLE 10
+L G+TW E
Sbjct: 59 DLYGETWRE 67


>sp|RFCS_METM7|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C7 /

Query: 2 NLMGKTWLE 10
+L G+TW E
Sbjct: 59 DLYGETWRE 67


>sp|HTR7_HALSA|TRANSDUCER protein Htr7|Halobacterium salinarum (strain ATCC 700922

Query: 1 ANLMGKTW 8
A+L+G TW
Sbjct: 51 ASLLGVTW 58


>sp|HTR7_HALS3|TRANSDUCER protein Htr7|Halobacterium salinarum (strain ATCC 29341

Query: 1 ANLMGKTW 8
A+L+G TW
Sbjct: 51 ASLLGVTW 58


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 4 MGKTWL 9
+GKTW+
Sbjct: 146 LGKTWV 151


>sp|RS4E_NANEQ|SMALL ribosomal subunit protein eS4|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ANLMGKTWLE 10
A +G+TWL+
Sbjct: 214 AGEVGETWLD 223


>sp|Y1513_PYRHO|UNCHARACTERIZED protein PH1513|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 MGKTWLE 10
+GK W+E
Sbjct: 61 LGKDWIE 67


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 MGKTWLE 10
+GK W+E
Sbjct: 363 LGKRWIE 369




201|SequenceR|1010|1001|WCRTKANLMG

>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 2 CRTKANLMG 10
CR ANL+G
Sbjct: 82 CRIAANLLG 90


>sp|TRPD_METB6|ANTHRANILATE phosphoribosyltransferase|Methanoregula boonei (strain DSM 21154

Query: 2 CRTKANLMG 10
CRT NL+G
Sbjct: 173 CRTVFNLLG 181


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 CRTKANLMG 10
CRT AN++
Sbjct: 307 CRTPANIIA 315




202|SequenceR|1015|1006|DMGQAWCRTK

>sp|CS3HE_THETK|CRISPR-ASSOCIATED helicase Cas3|Thermoproteus tenax (strain ATCC 35583

Query: 1 DMGQAWCRTK 10
++ AWCR+K
Sbjct: 12 ELSLAWCRSK 21


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DMGQAWCRTK 10
++G+A+C TK
Sbjct: 242 ELGRAFCETK 251


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 1 DMGQAWCRTK 10
++G+A+C TK
Sbjct: 242 ELGRAFCETK 251


>sp|GPMI_HALSA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DMGQAWCRTK 10
D Q W RTK
Sbjct: 186 DRDQNWARTK 195


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DMGQAWCRTK 10
DMG WC ++
Sbjct: 391 DMGWDWCISR 400


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DMGQAWCRTK 10
+MG A C TK
Sbjct: 239 EMGVAICETK 248




203|SequenceR|1020|1011|LPRWGDMGQA

>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 2 PRWGDMGQA 10
PRW D+G+A
Sbjct: 127 PRWVDIGEA 135


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PRWGDMG 8
P W DMG
Sbjct: 346 PYWNDMG 352


>sp|THI4_METBU|THIAMINE thiazole synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PRWGDMGQ 9
P W D+G+
Sbjct: 198 PMWADVGE 205


>sp|SODF_METTH|SUPEROXIDE dismutase [Fe]|Methanothermobacter thermautotrophicus (strain

Query: 4 WGDMGQA 10
WG+MG A
Sbjct: 85 WGNMGPA 91


>sp|CBIX_SACS2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LPRWGDMG 8
+P W D+G
Sbjct: 13 IPEWKDVG 20


>sp|CBIX_SACI7|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LPRWGDMG 8
+P W D+G
Sbjct: 13 IPEWKDVG 20


>sp|CBIX_SACI6|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LPRWGDMG 8
+P W D+G
Sbjct: 13 IPEWKDVG 20


>sp|CBIX_SACI4|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LPRWGDMG 8
+P W D+G
Sbjct: 13 IPEWKDVG 20


>sp|CBIX_SACI3|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.16.27)

Query: 1 LPRWGDMG 8
+P W D+G
Sbjct: 13 IPEWKDVG 20


>sp|CBIX_SACI2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LPRWGDMG 8
+P W D+G
Sbjct: 13 IPEWKDVG 20


>sp|CBIX_SACI1|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LPRWGDMG 8
+P W D+G
Sbjct: 13 IPEWKDVG 20


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPRWGD 6
LPRW D
Sbjct: 87 LPRWRD 92


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LPRWGD 6
LPRW D
Sbjct: 87 LPRWRD 92


>sp|SODF_METTM|SUPEROXIDE dismutase [Fe]|Methanothermobacter marburgensis (strain ATCC

Query: 4 WGDMGQA 10
WG+MG A
Sbjct: 82 WGNMGPA 88


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LPRWGD 6
LPRW D
Sbjct: 87 LPRWRD 92


>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain ATCC

Query: 4 WGDMGQ 9
WGDM +
Sbjct: 114 WGDMAE 119


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LPRWGD 6
LPRW D
Sbjct: 87 LPRWRD 92


>sp|HIS4_METTP|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothrix thermoacetophila

Query: 3 RWGDMG 8
RW DMG
Sbjct: 40 RWADMG 45


>sp|Y1575_ARCFU|UNCHARACTERIZED protein AF_1575|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WGDMG 8
WGD+G
Sbjct: 148 WGDIG 152


>sp|FENR2_SULAC|FERREDOXIN--NADP reductase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LPRWG 5
+PRWG
Sbjct: 252 VPRWG 256


>sp|RL3_METS5|LARGE ribosomal subunit protein uL3|Metallosphaera sedula (strain ATCC

Query: 4 WGDMG 8
WGD+G
Sbjct: 106 WGDLG 110


>sp|Y453_METLZ|UPF0280 protein Mlab_0453|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 RWGDM 7
RWGD+
Sbjct: 216 RWGDL 220


>sp|THI4_METTH|THIAMINE thiazole synthase|Methanothermobacter thermautotrophicus (strain

Query: 4 WGDMGQA 10
W D+G+A
Sbjct: 200 WADVGEA 206


>sp|Y1519_METMJ|UPF0280 protein Memar_1519|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RWGDM 7
RWGD+
Sbjct: 214 RWGDL 218


>sp|UDGB_PYRAE|TYPE-5 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LPRWGDM 7
+P WGD+
Sbjct: 52 VPPWGDL 58


>sp|RL22_AERPE|LARGE ribosomal subunit protein uL22|Aeropyrum pernix (strain ATCC

Query: 1 LPRWG 5
+PRWG
Sbjct: 1 MPRWG 5


>sp|PMDHL_METTH|PHOSPHOMEVALONATE dehydratase large subunit|Methanothermobacter thermautotrophicus

Query: 1 LPRWGDMG 8
L RW +MG
Sbjct: 91 LQRWREMG 98




204|SequenceR|1025|1016|QPISQLPRWG

>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PISQLPRW 9
P++++P W
Sbjct: 285 PVTEMPHW 292


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 PISQLPRWG 10
P SQL WG
Sbjct: 8313 PQSQLEEWG 8321


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PISQLPR 8
PI QLPR
Sbjct: 761 PIEQLPR 767


>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 4 SQLPRWG 10
SQ+ RWG
Sbjct: 600 SQIQRWG 606


>sp|Y018_METJA|UNCHARACTERIZED protein MJ0018|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ISQLPRWG 10
I+ LP WG
Sbjct: 447 INSLPDWG 454


>sp|MDH_METKA|MALATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 PISQLPRW 9
P++++P W
Sbjct: 195 PVTRMPGW 202


>sp|PYRF_HALSA|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 4 SQLPRWG 10
++LPRW
Sbjct: 36 AELPRWA 42


>sp|PYRF_HALS3|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 4 SQLPRWG 10
++LPRW
Sbjct: 36 AELPRWA 42


>sp|Y1610_PYRAB|UPF0216 protein PYRAB16100|Pyrococcus abyssi (strain GE5 /

Query: 1 QPISQLPRW 9
+PI +LPR+
Sbjct: 107 EPILKLPRY 115


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 QPISQLPRWG 10
+P+S++P+ G
Sbjct: 390 EPVSEIPQLG 399


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 ISQLPRW 9
I++LP+W
Sbjct: 264 ITELPQW 270


>sp|AMZA_THEKO|ARCHAEMETZINCIN kodakarensis (strain ATCC BAA-918

Query: 2 PISQLPRW 9
PI +P W
Sbjct: 8 PIGYIPEW 15


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain KIN4/I

Query: 1 QPISQLPRWG 10
+P+ L +WG
Sbjct: 169 RPVDSLTQWG 178


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 3 ISQLPRW 9
+ +LPRW
Sbjct: 223 VKELPRW 229


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain ATCC

Query: 3 ISQLPRW 9
+ +LPRW
Sbjct: 277 VKELPRW 283


>sp|EF1A_THESM|ELONGATION factor 1-alpha|Thermococcus sibiricus (strain DSM 12597

Query: 1 QPISQLPRWG 10
+P+ +LP+ G
Sbjct: 396 EPVKELPQLG 405


>sp|RL3_METS5|LARGE ribosomal subunit protein uL3|Metallosphaera sedula (strain ATCC

Query: 3 ISQLPRW 9
+ +LPRW
Sbjct: 225 VQELPRW 231


>sp|EF1A_PYRAB|ELONGATION factor 1-alpha|Pyrococcus abyssi (strain GE5 /

Query: 1 QPISQLPRWG 10
+P+ +LP+ G
Sbjct: 396 EPVKELPQLG 405


>sp|RL3_CALMQ|LARGE ribosomal subunit protein uL3|Caldivirga maquilingensis (strain

Query: 3 ISQLPRW 9
+ +LPRW
Sbjct: 225 VKELPRW 231




205|SequenceR|1030|1021|LCWKLQPISQ

>sp|Y1110_METTH|UNCHARACTERIZED protein MTH_1110|Methanothermobacter thermautotrophicus (strain

Query: 2 CWKLQP 7
CW L P
Sbjct: 22 CWSLHP 27


>sp|RIO1_METJA|RIO-TYPE serine/threonine-protein kinase Rio1|Methanocaldococcus

Query: 2 CWKLQPISQ 10
C+K+ PI++
Sbjct: 3 CYKVMPIAK 11


>sp|DGGGP_THEON|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus onnurineus (strain NA1)

Query: 3 WKLQPI 8
WKL+P+
Sbjct: 122 WKLKPL 127


>sp|DGGGP_THEGJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 WKLQPI 8
WKL+P+
Sbjct: 122 WKLKPL 127


>sp|DGGGP_PYRHO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WKLQPI 8
WKL+P+
Sbjct: 122 WKLKPL 127


>sp|DGGGP_PYRFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WKLQPI 8
WKL+P+
Sbjct: 122 WKLKPL 127


>sp|DGGGP_PYRAB|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 WKLQPI 8
WKL+P+
Sbjct: 122 WKLKPL 127


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 CWKLQP 7
C+K+QP
Sbjct: 122 CYKIQP 127




206|SequenceR|1035|1026|QGSALLCWKL

>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 1 QGSALLCWKL 10
QGS L CW+L
Sbjct: 191 QGSRLTCWEL 200


>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 1 QGSALLCWKL 10
QGS + W+L
Sbjct: 203 QGSRITTWEL 212




207|SequenceR|1040|1031|ENLVAQGSAL

>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ENLVAQGSAL 10
EN AQGSAL
Sbjct: 104 ENAKAQGSAL 113


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 ENLVAQGS 8
ENL+ QGS
Sbjct: 66 ENLIIQGS 73


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis

Query: 1 ENLVAQGSA 9
ENL+ QG+A
Sbjct: 58 ENLMQQGAA 66




208|SequenceR|1045|1036|TALDTENLVA

>sp|RL22_METB6|LARGE ribosomal subunit protein uL22|Methanoregula boonei (strain DSM

Query: 1 TALDTENL 8
T LDTENL
Sbjct: 105 TGLDTENL 112


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 ALDTENLVA 10
LDT++LVA
Sbjct: 429 GLDTDDLVA 437


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 2 ALDTEN 7
ALDTEN
Sbjct: 170 ALDTEN 175




209|SequenceR|1050|1041|MNLILTALDT

>sp|Y1280_METJA|UNCHARACTERIZED protein MJ1280|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MNLILTAL 8
MNLILT L
Sbjct: 1 MNLILTLL 8


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 2 NLILTALDT 10
NLI+ A+DT
Sbjct: 305 NLIMGAVDT 313




210|SequenceR|1055|1046|CMTILMNLIL

>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CMTILMNLI 9
C TILMN +
Sbjct: 209 CQTILMNYV 217




211|SequenceR|1060|1051|SPFYGCMTIL

>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PFYGCM 7
PFYGC+
Sbjct: 424 PFYGCV 429


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SPFYGCMT 8
SP Y CM+
Sbjct: 652 SPLYRCMS 659


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus

Query: 1 SPFYGCMT 8
+PF GC T
Sbjct: 15 TPFGGCTT 22


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SPFYGCMTI 9
+PFYG + I
Sbjct: 422 NPFYGLIPI 430


>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PFYGCMTI 9
P YG MTI
Sbjct: 259 PEYGMMTI 266


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 3 FYGCM 7
FYGC+
Sbjct: 185 FYGCL 189




212|SequenceR|1065|1056|NDQDRSPFYG

>sp|Y1126_METTH|UNCHARACTERIZED protein MTH_1126|Methanothermobacter thermautotrophicus (strain

Query: 1 NDQDRSPFYG 10
ND D P YG
Sbjct: 20 NDADMGPEYG 29


>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DQDRSPFY 9
DQ R PFY
Sbjct: 368 DQLRQPFY 375


>sp|ARCH_METKA|PROTEIN archease|Methanopyrus kandleri (strain AV19 /

Query: 2 DQDRSPFY 9
D DR PF+
Sbjct: 105 DPDRHPFH 112


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 2 DQDRSPFY 9
++DR+P+Y
Sbjct: 513 ERDRNPYY 520




213|SequenceR|1070|1061|PRIIANDQDR

***** No hits found ******


214|SequenceR|1075|1066|KVKPLPRIIA

>sp|HJC_METTH|CROSSOVER junction endodeoxyribonuclease Hjc|Methanothermobacter

Query: 3 KPLPRIIA 10
KPLP IIA
Sbjct: 35 KPLPDIIA 42


>sp|GLNA_HALVD|GLUTAMINE synthetase|Haloferax volcanii (strain ATCC 29605

Query: 3 KPLPRI 8
KP+PRI
Sbjct: 245 KPIPRI 250


>sp|COBS_METMA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KPLPRI 8
KPLPR+
Sbjct: 170 KPLPRL 175


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 1 KVKPLPR 7
K KPLPR
Sbjct: 110 KAKPLPR 116


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 1 KVKPLPR 7
KV PLPR
Sbjct: 110 KVNPLPR 116


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVKPLPRI 8
K+K LPRI
Sbjct: 1485 KLKKLPRI 1492


>sp|DGGGP_THEGJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KVKPLPRI 8
K+KPLP I
Sbjct: 123 KLKPLPFI 130




215|SequenceR|1080|1071|DSLLRKVKPL

>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain Fusaro

Query: 1 DSLLRKVKPL 10
D+L RKV+P+
Sbjct: 355 DTLYRKVEPV 364


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 1 DSLLRKVKP 9
D+L RKV+P
Sbjct: 355 DTLYRKVEP 363


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM

Query: 1 DSLLRKVKPL 10
D+LLR KPL
Sbjct: 70 DALLRLRKPL 79


>sp|HOSA_PYRAB|HOMOCITRATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 SLLRKVK 8
SLLRKVK
Sbjct: 335 SLLRKVK 341


>sp|THPR_ARCFU|RNA 2',3'-cyclic phosphodiesterase|Archaeoglobus fulgidus (strain

Query: 1 DSLLRKVKPL 10
DS+ KVKP+
Sbjct: 11 DSIREKVKPI 20


>sp|PCNA2_SULOH|DNA polymerase sliding clamp 2|Sulfurisphaera ohwakuensis

Query: 2 SLLRKVKPL 10
SLLR+ KPL
Sbjct: 179 SLLRQDKPL 187


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus

Query: 1 DSLLRKVKPL 10
D LLR KPL
Sbjct: 73 DGLLRLKKPL 82


>sp|CMR4_SACS2|CRISPR system CMR subunit Cmr4|Saccharolobus solfataricus (strain ATCC

Query: 3 LLRKVKPL 10
LLRKVK L
Sbjct: 119 LLRKVKSL 126


>sp|TRMY_AERPE|TRNA (pseudouridine(54)-N(1))-methyltransferase|Aeropyrum pernix (strain

Query: 2 SLLRKVKP 9
SLLR+ KP
Sbjct: 103 SLLRRFKP 110




216|SequenceR|1085|1076|PLCTSDSLLR

>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CTSDSLLR 10
CTSDS+LR
Sbjct: 366 CTSDSVLR 373


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CTSDSLLR 10
CTSDS+LR
Sbjct: 366 CTSDSVLR 373


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CTSDSLLR 10
CTSD++LR
Sbjct: 363 CTSDTVLR 370


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PLCTSDSLLR 10
P T+DSLLR
Sbjct: 315 PPYTTDSLLR 324




217|SequenceR|1090|1081|LQIIHPLCTS

>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LQIIHPLCTS 10
L+II P+C S
Sbjct: 7 LEIIRPVCGS 16


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 LQIIHPLCTS 10
+++I+P CTS
Sbjct: 167 IELINPRCTS 176


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LQIIHPL 7
LQ IHPL
Sbjct: 285 LQYIHPL 291


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 1 LQIIHPLC 8
LQ+I+P C
Sbjct: 348 LQLINPKC 355


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 QIIHPLCTS 10
++ HP CT+
Sbjct: 172 ELEHPACTT 180




218|SequenceR|1095|1086|DFTLLLQIIH

>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFTLLLQIIH 10
DFT+L Q++H
Sbjct: 180 DFTMLHQLLH 189


>sp|KPRS_METMA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DFTLLLQII 9
DF LLQ+I
Sbjct: 73 DFVALLQLI 81


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DFTLLLQII 9
DF LLQ+I
Sbjct: 61 DFVALLQLI 69




219|SequenceR|1100|1091|EVLIPDFTLL

>sp|LIPA_PICTO|LIPOYL synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 EVLIPDFT 8
EVLIPDF+
Sbjct: 130 EVLIPDFS 137


>sp|LIPA_HALSA|LIPOYL synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EVLIPDF 7
EVLIPDF
Sbjct: 138 EVLIPDF 144


>sp|LIPA_HALS3|LIPOYL synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 EVLIPDF 7
EVLIPDF
Sbjct: 138 EVLIPDF 144


>sp|RL3_THESM|LARGE ribosomal subunit protein uL3|Thermococcus sibiricus (strain DSM

Query: 1 EVLIPDFTL 9
EV++PDF L
Sbjct: 98 EVIVPDFKL 106


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 1 EVLIPDFTL 9
EV++PDF L
Sbjct: 98 EVIVPDFEL 106


>sp|RL3_PYRAB|LARGE ribosomal subunit protein uL3|Pyrococcus abyssi (strain GE5 /

Query: 1 EVLIPDFTL 9
EV++PDF L
Sbjct: 98 EVIVPDFEL 106


>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 1 EVLIPDFTL 9
EV++PDF L
Sbjct: 98 EVIVPDFPL 106


>sp|LIPA_PYRAE|LIPOYL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EVLIPDF 7
EVL+PDF
Sbjct: 129 EVLVPDF 135


>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EVLIPDFT 8
E +IPDFT
Sbjct: 137 EAIIPDFT 144


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 3 LIPDFTLL 10
+IPDFTL
Sbjct: 130 IIPDFTLF 137


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EVLIPDF 7
E LIPDF
Sbjct: 139 ETLIPDF 145


>sp|LIPA_AERPE|LIPOYL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EVLIPDF 7
E LIPDF
Sbjct: 130 EALIPDF 136


>sp|LIPA_NATPD|LIPOYL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EVLIPDF 7
E LIPDF
Sbjct: 139 EALIPDF 145


>sp|LIPA_SULAC|LIPOYL synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EVLIPDF 7
EVL PDF
Sbjct: 127 EVLTPDF 133


>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EVLIPDF 7
EVL PDF
Sbjct: 132 EVLTPDF 138


>sp|LIPA_PYRAR|LIPOYL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EVLIPDF 7
EVL PDF
Sbjct: 133 EVLTPDF 139


>sp|LIPA_SACS2|LIPOYL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EVLIPDF 7
EVL PDF
Sbjct: 129 EVLTPDF 135


>sp|DTD_METST|D-AMINOACYL-TRNA deacylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VLIPDFTL 9
+LIP FTL
Sbjct: 74 LLIPQFTL 81


>sp|NIKMN_ARCFU|PUTATIVE fused nickel transport protein|Archaeoglobus fulgidus (strain ATCC

Query: 1 EVLIPDFTL 9
E L+PD+TL
Sbjct: 253 EGLLPDYTL 261


>sp|KTHY_METBU|PROBABLE thymidylate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LIPDFTLL 10
+IPD TLL
Sbjct: 123 IIPDLTLL 130


>sp|Y1556_METMJ|UPF0200 protein Memar_1556|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 PDFTLL 10
PDFTL+
Sbjct: 102 PDFTLI 107


>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EVLIPDFTLL 10
EVL P +TLL
Sbjct: 80 EVLKPIYTLL 89


>sp|PUR7_METAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VLIPDFTL 9
+L+PDF L
Sbjct: 170 ILLPDFKL 177


>sp|PUR7_METMA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VLIPDFTL 9
+L+PDF L
Sbjct: 170 ILLPDFKL 177


>sp|PUR7_METBF|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VLIPDFTL 9
+L+PDF L
Sbjct: 170 ILLPDFKL 177


>sp|GPGS_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EVLIPDFT 8
+VL+PD+T
Sbjct: 369 DVLMPDWT 376




220|SequenceR|1105|1096|LIAVKEVLIP

>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 2 IAVKEVLIP 10
I VKEVLIP
Sbjct: 850 ILVKEVLIP 858


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 2 IAVKEVLIP 10
+AVKEVL+P
Sbjct: 871 VAVKEVLLP 879


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 2 IAVKEVLIP 10
+AVKEVL+P
Sbjct: 869 VAVKEVLLP 877


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 2 IAVKEVLIP 10
+AVKEVL+P
Sbjct: 869 VAVKEVLLP 877


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 2 IAVKEVLIP 10
+AVKEVL+P
Sbjct: 869 VAVKEVLLP 877


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 2 IAVKEVLIP 10
+AVKEVL+P
Sbjct: 870 VAVKEVLLP 878


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 IAVKEVLIP 10
+AVKEVL+P
Sbjct: 883 VAVKEVLLP 891


>sp|SMC_METJA|CHROMOSOME partition protein Smc|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LIAVKEVLIP 10
L VKE+LIP
Sbjct: 827 LTLVKEILIP 836


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 2 IAVKEVLIP 10
+++KEVL+P
Sbjct: 881 VSIKEVLLP 889


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 2 IAVKEVLIP 10
+++KEVL+P
Sbjct: 882 VSIKEVLLP 890


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 2 IAVKEVLIP 10
+++KEVL+P
Sbjct: 881 VSIKEVLLP 889


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 2 IAVKEVLIP 10
+++KEVL+P
Sbjct: 205 VSIKEVLLP 213




221|SequenceR|1110|1101|MIHYLLIAVK

>sp|RU1PA_HALXS|RIBULOSE-1-PHOSPHATE aldolase|Halopiger xanaduensis (strain DSM 18323

Query: 2 IHYLLIAV 9
IHY+++AV
Sbjct: 118 IHYMIVAV 125




222|SequenceR|1115|1106|QPNDQMIHYL

>sp|ASNH1_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 1|Methanocaldococcus

Query: 1 QPNDQMIHYL 10
+PN Q+I+YL
Sbjct: 203 KPNSQLIYYL 212


>sp|PGMI_PYRCJ|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum calidifontis

Query: 2 PNDQMIHYL 10
PND +IH L
Sbjct: 163 PNDPLIHKL 171


>sp|DTDA_PYRHO|D-AMINOACYL-TRNA deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NDQMIHY 9
ND+MI+Y
Sbjct: 50 NDEMIYY 56


>sp|ARGDC_IGNH4|ARGININE decarboxylase proenzyme|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 QPNDQMIHY 9
+P D ++HY
Sbjct: 118 EPEDYVVHY 126


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PNDQMIH 8
PND M H
Sbjct: 311 PNDDMTH 317


>sp|DTDA_PYRAB|D-AMINOACYL-TRNA deacylase|Pyrococcus abyssi (strain GE5 /

Query: 3 NDQMIHY 9
ND+MI+Y
Sbjct: 50 NDEMIYY 56


>sp|DTDA_THEON|D-AMINOACYL-TRNA deacylase|Thermococcus onnurineus (strain NA1)

Query: 3 NDQMIHY 9
ND+MI+Y
Sbjct: 50 NDEMIYY 56


>sp|PGMI_PYRAE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum aerophilum

Query: 2 PNDQMIHYL 10
PN+ +IH L
Sbjct: 166 PNEALIHKL 174


>sp|KHSE_PICTO|HOMOSERINE kinase|Picrophilus torridus (strain ATCC 700027

Query: 3 NDQMIHY 9
+D+M+HY
Sbjct: 111 HDEMVHY 117




223|SequenceR|1120|1111|YLRPLQPNDQ

>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLRPLQPNDQ 10
+L P+QP ++
Sbjct: 25 FLNPIQPKEK 34


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 YLRPLQ 6
YLRPLQ
Sbjct: 403 YLRPLQ 408


>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 1 YLRPLQPND 9
+L P QP D
Sbjct: 197 FLPPFQPED 205


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 PLQPNDQ 10
PL PND+
Sbjct: 443 PLHPNDE 449


>sp|RL1_HALWD|LARGE ribosomal subunit protein uL1|Haloquadratum walsbyi (strain DSM

Query: 4 PLQPND 9
PLQP+D
Sbjct: 131 PLQPDD 136


>sp|RL1_NATPD|LARGE ribosomal subunit protein uL1|Natronomonas pharaonis (strain ATCC

Query: 4 PLQPND 9
PLQP+D
Sbjct: 131 PLQPDD 136


>sp|RL1_HALVD|LARGE ribosomal subunit protein uL1|Haloferax volcanii (strain ATCC 29605

Query: 4 PLQPND 9
PLQP+D
Sbjct: 131 PLQPDD 136


>sp|RL1_HALSA|LARGE ribosomal subunit protein uL1|Halobacterium salinarum (strain ATCC

Query: 4 PLQPND 9
PLQP+D
Sbjct: 132 PLQPDD 137


>sp|RL1_HALS3|LARGE ribosomal subunit protein uL1|Halobacterium salinarum (strain ATCC

Query: 4 PLQPND 9
PLQP+D
Sbjct: 132 PLQPDD 137


>sp|RL1_HALLT|LARGE ribosomal subunit protein uL1|Halorubrum lacusprofundi (strain ATCC

Query: 4 PLQPND 9
PLQP+D
Sbjct: 131 PLQPDD 136




224|SequenceR|1125|1116|FVGSLYLRPL

>sp|COFD_METVS|2-PHOSPHO-L-LACTATE transferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FVGSLYLRP 9
++G LYL P
Sbjct: 39 YIGDLYLSP 47


>sp|MOAC_METB6|PROBABLE cyclic pyranopterin monophosphate synthase|Methanoregula boonei

Query: 3 GSLYLRP 9
G +YLRP
Sbjct: 31 GRIYLRP 37


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FVGSLYL 7
F GSLYL
Sbjct: 446 FAGSLYL 452


>sp|COFD_METMP|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FVGSLYLRP 9
++G +YL P
Sbjct: 39 YIGDIYLSP 47


>sp|COFD_METM7|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C7 /

Query: 1 FVGSLYLRP 9
++G +YL P
Sbjct: 39 YIGDIYLSP 47


>sp|COFD_METM6|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C6 /

Query: 1 FVGSLYLRP 9
++G +YL P
Sbjct: 39 YIGDIYLSP 47


>sp|COFD_METM5|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C5 /

Query: 1 FVGSLYLRP 9
++G +YL P
Sbjct: 39 YIGDIYLSP 47


>sp|CAPPA_SULAC|PHOSPHOENOLPYRUVATE carboxylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FVGSLY 6
FVGSLY
Sbjct: 382 FVGSLY 387


>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 1 FVGSLY 6
FVGSLY
Sbjct: 381 FVGSLY 386


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FVGSLY 6
FVGSLY
Sbjct: 382 FVGSLY 387


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FVGSLY 6
FVGSLY
Sbjct: 382 FVGSLY 387


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FVGSLY 6
FVGSLY
Sbjct: 382 FVGSLY 387


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FVGSLY 6
FVGSLY
Sbjct: 382 FVGSLY 387


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FVGSLY 6
FVGSLY
Sbjct: 382 FVGSLY 387


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FVGSLY 6
FVGSLY
Sbjct: 382 FVGSLY 387


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FVGSLY 6
FVGSLY
Sbjct: 382 FVGSLY 387




225|SequenceR|1130|1121|MMIFFFVGSL

>sp|HTR2_NATPH|SENSORY rhodopsin II transducer|Natronomonas pharaonis (Natronobacterium

Query: 3 IFFFVGSL 10
+F FVG+L
Sbjct: 25 VFIFVGAL 32


>sp|PRNK_PYRFU|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PF0112|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MIFFFVGSL 10
+I +FVGS+
Sbjct: 96 LIHYFVGSI 104




226|SequenceR|1135|1126|NSGTYMMIFF

>sp|HEM1_SACS2|GLUTAMYL-TRNA reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SGTYMMIFF 10
SG Y+ IFF
Sbjct: 135 SGKYLQIFF 143


>sp|MTAP_THEAC|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NSGTYMMI 8
NSGTY+ I
Sbjct: 154 NSGTYITI 161


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 NSGTYMMIFF 10
+SG Y+ I+F
Sbjct: 134 DSGEYLAIYF 143


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 GTYMMIFF 10
G Y++IFF
Sbjct: 209 GEYVVIFF 216


>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NSGTYMMI 8
N+GTY+++
Sbjct: 196 NNGTYLIL 203


>sp|AQPM_ARCFU|PROBABLE aquaporin AqpM|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GTYMMIFF 10
GT++++FF
Sbjct: 15 GTFILVFF 22




227|SequenceR|1140|1131|AVPLVNSGTY

>sp|KCY_PYRNV|CYTIDYLATE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VPLVNSGT 9
VPLV+SGT
Sbjct: 27 VPLVSSGT 34


>sp|KCY_PYRAR|CYTIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VPLVNSGT 9
VPLV+SGT
Sbjct: 27 VPLVSSGT 34


>sp|MTAP_THEAC|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VPLVNSGTY 10
+P+ NSGTY
Sbjct: 150 IPVHNSGTY 158


>sp|PYRB_HALMA|ASPARTATE carbamoyltransferase catalytic subunit|Haloarcula marismortui

Query: 2 VPLVNSG 8
VPLVN+G
Sbjct: 119 VPLVNAG 125


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 AVPLVNSG 8
AVPL N+G
Sbjct: 635 AVPLANAG 642


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 1 AVPLVNSGTY 10
V L+NSGT+
Sbjct: 440 GVHLINSGTF 449


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 1 AVPLVNSGTY 10
V +VNSGT+
Sbjct: 540 GVVMVNSGTF 549


>sp|PYRB_METMA|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina mazei (strain

Query: 1 AVPLVNSG 8
AVP++N G
Sbjct: 123 AVPVINGG 130


>sp|PYRB_HALLT|ASPARTATE carbamoyltransferase catalytic subunit|Halorubrum lacusprofundi

Query: 1 AVPLVNSG 8
+VP+VN+G
Sbjct: 118 SVPVVNAG 125


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PLVNSGT 9
PLV SGT
Sbjct: 106 PLVTSGT 112


>sp|ASPGP_PYRAB|PLANT-TYPE L-asparaginase|Pyrococcus abyssi (strain GE5 /

Query: 3 PLVNSGTY 10
P++ +GTY
Sbjct: 207 PIIGAGTY 214


>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PLVNSGTY 10
P++ +GTY
Sbjct: 208 PIIGAGTY 215


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LVNSGTY 10
LVNSG Y
Sbjct: 389 LVNSGEY 395


>sp|ASPGP_PYRHO|PLANT-TYPE L-asparaginase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PLVNSGTY 10
P++ +GTY
Sbjct: 207 PIIGAGTY 214


>sp|HPRT_METPS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocella paludicola (strain DSM

Query: 3 PLVNSGTY 10
P+V GTY
Sbjct: 13 PIVRRGTY 20


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PLVNSGTY 10
P+VN G Y
Sbjct: 123 PVVNEGDY 130


>sp|HPRT_METAR|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocella arvoryzae (strain DSM

Query: 3 PLVNSGTY 10
P+V GTY
Sbjct: 13 PIVKRGTY 20


>sp|ASPGP_THEKO|PLANT-TYPE L-asparaginase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PLVNSGTY 10
P++ GTY
Sbjct: 208 PIIGGGTY 215




228|SequenceR|1145|1136|YKLFRAVPLV

>sp|G3P_METVS|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YKLFRAVP 8
YKLF A+P
Sbjct: 48 YKLFAAIP 55


>sp|G3P_METMP|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YKLFRAVP 8
YKLF A+P
Sbjct: 48 YKLFAAIP 55


>sp|G3P_METM7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 YKLFRAVP 8
YKLF A+P
Sbjct: 48 YKLFAAIP 55


>sp|G3P_METM6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 1 YKLFRAVP 8
YKLF A+P
Sbjct: 48 YKLFAAIP 55


>sp|G3P_METM5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 YKLFRAVP 8
YKLF A+P
Sbjct: 48 YKLFAAIP 55


>sp|G3P_METJA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YKLFRAVP 8
YKLF A+P
Sbjct: 49 YKLFVAIP 56


>sp|CDPAS_PYRAE|CDP-ARCHAEOL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YKLFRAVPLV 10
Y LFR +P+V
Sbjct: 125 YSLFREIPVV 134


>sp|Y1316_THEGJ|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 2 KLFRAVPLV 10
KLF+A P++
Sbjct: 66 KLFKATPMI 74


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YKLFRAVPLV 10
Y+++R PLV
Sbjct: 77 YRIWRPTPLV 86


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YKLFRAVP 8
YK+ RA+P
Sbjct: 94 YKIARAIP 101


>sp|Y1808_PYRHO|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus horikoshii

Query: 2 KLFRAVPLV 10
KLF+A PL+
Sbjct: 66 KLFKASPLL 74




229|SequenceR|1150|1141|QKTHTYKLFR

***** No hits found ******


230|SequenceR|1155|1146|ESKFAQKTHT

>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SKFAQKT 8
SKFAQ+T
Sbjct: 225 SKFAQRT 231




231|SequenceR|1160|1151|QGKTEESKFA

>sp|Y154_ARCFU|UNCHARACTERIZED protein AF_0154|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GKTEESKFA 10
G+TEE +FA
Sbjct: 33 GRTEEVRFA 41


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 4 TEESKFA 10
TEE KFA
Sbjct: 245 TEEGKFA 251


>sp|WTPA_THEKO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 TEESKFA 10
TEESK+A
Sbjct: 128 TEESKYA 134




232|SequenceR|1165|1156|RQFIDQGKTE

>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 1 RQFIDQGKTE 10
+QF+ QG+ E
Sbjct: 409 QQFVTQGRNE 418


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 1 RQFIDQGKTE 10
R+F++QG+ E
Sbjct: 409 RRFVNQGRDE 418


>sp|PURQ_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RQFIDQGK 8
R+F+D GK
Sbjct: 84 REFVDDGK 91


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RQFIDQGKTE 10
R+FI+QG E
Sbjct: 415 RKFINQGINE 424


>sp|RS8_METTP|SMALL ribosomal subunit protein uS8|Methanothrix thermoacetophila

Query: 2 QFIDQGKT 9
+FID GK+
Sbjct: 50 EFIDDGKS 57


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 2 QFIDQGKTE 10
QF+ QG+ E
Sbjct: 410 QFVRQGRNE 418


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RQFIDQGKTE 10
R+F+ QG+ E
Sbjct: 408 RRFVQQGRYE 417


>sp|RS8_NATPD|SMALL ribosomal subunit protein uS8|Natronomonas pharaonis (strain ATCC

Query: 2 QFIDQGK 8
QF+D GK
Sbjct: 51 QFVDDGK 57




233|SequenceR|1170|1161|HGLISRQFID

>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 3 LISRQFID 10
L+SRQ++D
Sbjct: 181 LVSRQYVD 188


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 HGLISRQFID 10
HG++SR +D
Sbjct: 96 HGILSRLGVD 105




234|SequenceR|1175|1166|AEPLIHGLIS

>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 2 EPLIHGLI 9
EPLIH ++
Sbjct: 259 EPLIHAIL 266


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PLIHGLIS 10
PL HGL+
Sbjct: 521 PLFHGLVK 528


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AEPLIHGLIS 10
+P++H LI+
Sbjct: 245 GKPIVHALIN 254


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 PLIHGL 8
PL+HGL
Sbjct: 203 PLLHGL 208


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PLIHGL 8
P+IHGL
Sbjct: 205 PIIHGL 210


>sp|UBAA_HALVD|SAMP-ACTIVATING enzyme E1|Haloferax volcanii (strain ATCC 29605

Query: 3 PLIHGLI 9
PL+HG I
Sbjct: 149 PLVHGAI 155


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 AEPLIHGLI 9
AEPL GLI
Sbjct: 710 AEPLEKGLI 718


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 AEPLIHGLI 9
A+P +HG++
Sbjct: 86 ADPAVHGIL 94


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 3 PLIHGL 8
P+IHGL
Sbjct: 316 PMIHGL 321




235|SequenceR|1180|1171|LYCVMAEPLI

>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 2 YCVMAEPLI 10
YC + EP+I
Sbjct: 257 YCSLGEPVI 265


>sp|PUR5_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LYCVMAEPL 9
L CV AEPL
Sbjct: 91 LLCVGAEPL 99


>sp|GSA2_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 2|Cenarchaeum symbiosum (strain A)

Query: 1 LYCVMAEPLI 10
L CV+ EPL+
Sbjct: 200 LACVIIEPLL 209


>sp|GIN15_SACS2|DNA replication complex GINS protein|Saccharolobus solfataricus (strain

Query: 1 LYCVMAEPLI 10
+YC++ +PLI
Sbjct: 103 IYCIVQKPLI 112


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LYCVMAEPL 9
L CV AEP+
Sbjct: 91 LICVGAEPI 99


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LYCVMAEPL 9
L CV AEP+
Sbjct: 92 LLCVGAEPI 100


>sp|PDAD_METBU|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LYCVMAE 7
+YCVMA+
Sbjct: 65 VYCVMAK 71


>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LYCVMAEPL 9
L CV AEP+
Sbjct: 92 LLCVGAEPV 100


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LYCVMAEPL 9
L CV AEP+
Sbjct: 91 LICVGAEPV 99


>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YCVMAEPL 9
YC++ +PL
Sbjct: 105 YCMVMDPL 112




236|SequenceR|1185|1176|PEYNELYCVM

>sp|GLCDH_HALMA|GLUCOSE 1-dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 2 EYNELYCV 9
EY+ YCV
Sbjct: 195 EYDRTYCV 202


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EYNELYC 8
EY ++YC
Sbjct: 189 EYKDIYC 195


>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 3 YNELYCV 9
YN +YCV
Sbjct: 89 YNGIYCV 95


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 3 YNELYCV 9
YN+L CV
Sbjct: 177 YNDLTCV 183


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PEYNELYC 8
PEY YC
Sbjct: 386 PEYELKYC 393


>sp|RS4E_NANEQ|SMALL ribosomal subunit protein eS4|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PEYNELYCVM 10
PE NE Y V+
Sbjct: 94 PEINEYYRVL 103


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EYNELYCV 9
+YN+L CV
Sbjct: 176 KYNDLDCV 183


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EYNELYCV 9
EYN+ CV
Sbjct: 176 EYNDAECV 183




237|SequenceR|1190|1181|ESFKEPEYNE

>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 3 FKEPEYNE 10
FKEPEY E
Sbjct: 241 FKEPEYFE 248


>sp|HTPX_THEAC|PROTEASE HtpX homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 EPEYN 9
EPEYN
Sbjct: 79 EPEYN 83


>sp|VHOC_METMA|F420 non-reducing hydrogenase I cytochrome|Methanosarcina mazei (strain

Query: 1 ESFKEPEYNE 10
E F +P Y+E
Sbjct: 234 EDFSDPYYSE 243


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 6 PEYNE 10
PEYNE
Sbjct: 200 PEYNE 204


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SFKEPEY 8
SF++PEY
Sbjct: 11 SFRKPEY 17


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 1 ESFKEPEYNE 10
+++ EPEY +
Sbjct: 179 DTYAEPEYRD 188


>sp|Y053_METJA|UNCHARACTERIZED protein MJ0053|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESFKEPEYNE 10
ESFK+PE E
Sbjct: 149 ESFKKPEMIE 158


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ESFKEPEYNE 10
E + EPEY +
Sbjct: 179 EMYAEPEYKD 188


>sp|EF1A_METM6|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C6 /

Query: 2 SFKEPEYNE 10
+F E +YNE
Sbjct: 155 NFSEADYNE 163


>sp|EF1A_METMP|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain DSM 14266

Query: 2 SFKEPEYNE 10
+F E +YNE
Sbjct: 155 NFSEADYNE 163


>sp|EF1A_METM7|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C7 /

Query: 2 SFKEPEYNE 10
+F E +YNE
Sbjct: 155 NFSEADYNE 163


>sp|EF1A_METVS|ELONGATION factor 1-alpha|Methanococcus vannielii (strain ATCC 35089

Query: 2 SFKEPEYNE 10
+F E +YNE
Sbjct: 155 NFSEADYNE 163


>sp|EF1A_METM5|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C5 /

Query: 2 SFKEPEYNE 10
+F E +YNE
Sbjct: 155 NFSEADYNE 163


>sp|EF1A_METVA|ELONGATION factor 1-alpha|Methanococcus vannielii

Query: 2 SFKEPEYNE 10
+F E +YNE
Sbjct: 155 NFSEADYNE 163


>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ESFKEPEYNE 10
E + EPEY+E
Sbjct: 438 EEYLEPEYDE 447




238|SequenceR|1195|1186|EGLFIESFKE

>sp|LIPB_PYRCJ|PROBABLE octanoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EGLFIESFKE 10
+GLF+E+F+E
Sbjct: 183 KGLFVEAFEE 192


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 LFIESFKE 10
+FIESFK+
Sbjct: 125 IFIESFKK 132


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 LFIESFKE 10
+FIESFK+
Sbjct: 125 IFIESFKK 132


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 LFIESFKE 10
+FIESFK+
Sbjct: 125 IFIESFKK 132


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 LFIESFKE 10
+FIESFK+
Sbjct: 125 IFIESFKK 132


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LFIESFKE 10
+FIESFK+
Sbjct: 125 IFIESFKK 132


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LFIESFKE 10
+FIESFK+
Sbjct: 125 VFIESFKK 132


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 EGLFIESFKE 10
EG+ IE FKE
Sbjct: 45 EGITIEVFKE 54


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EGLFIESFKE 10
E LFIE F+E
Sbjct: 588 EKLFIEHFRE 597


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LFIESFK 9
+FIESFK
Sbjct: 125 VFIESFK 131


>sp|IXTPA_PYRHO|DITP/XTP pyrophosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GLFIESFK 9
GLFIES K
Sbjct: 67 GLFIESLK 74


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGLFIESFKE 10
+GLF+E F E
Sbjct: 189 DGLFLEVFNE 198


>sp|SPEE_PICTO|POLYAMINE aminopropyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 EGLFIESFKE 10
EGLF +SF E
Sbjct: 166 EGLFNKSFYE 175


>sp|DHPSL_METJA|7,8-DIHYDROPTERIN-6-METHYL-4-(BETA-D-RIBOFURANOSYL)-AMINOBENZENE-5'-PHOSPHATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGLFIESFKE 10
E +F+E FKE
Sbjct: 272 ENMFMEEFKE 281


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing]

Query: 1 EGLFIESFK 9
EG+FI +FK
Sbjct: 34 EGIFIYNFK 42


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 EGLFIESFK 9
EG+ +E+FK
Sbjct: 23 EGMDVETFK 31


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 FIESFKE 10
F+ESFKE
Sbjct: 138 FLESFKE 144


>sp|GGR_PYRHO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EGLFIESFKE 10
EGL I +FK+
Sbjct: 45 EGLTINAFKQ 54


>sp|RNFA_METAC|ION-TRANSLOCATING oxidoreductase complex subunit A|Methanosarcina acetivorans

Query: 1 EGLFIESF 8
EG+FI++F
Sbjct: 14 EGVFIKNF 21




239|SequenceR|1200|1191|EPTDFEGLFI

>sp|RS2_METST|SMALL ribosomal subunit protein uS2|Methanosphaera stadtmanae (strain

Query: 1 EPTDFE 6
EPTDFE
Sbjct: 190 EPTDFE 195


>sp|IF2B_METMJ|TRANSLATION initiation factor 2 subunit|Methanoculleus marisnigri (strain

Query: 1 EPTDFEGLF 9
EPT+FE F
Sbjct: 18 EPTEFEDRF 26


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EPTDFE 6
EP+DFE
Sbjct: 317 EPSDFE 322


>sp|TRPC_THEAC|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EPTDFEGLF 9
EPT F G F
Sbjct: 79 EPTHFSGSF 87


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EPTDFEGL 8
EPT FEG+
Sbjct: 362 EPTIFEGV 369


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 EPTDFEGL 8
EP FEGL
Sbjct: 871 EPVPFEGL 878


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 1 EPTDFEGL 8
EP +FEG+
Sbjct: 177 EPVNFEGV 184


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 EPTDFEGL 8
+P D EGL
Sbjct: 873 DPADLEGL 880


>sp|Y1671_PYRHO|UPF0173 metal-dependent hydrolase PH1671|Pyrococcus horikoshii (strain ATCC

Query: 2 PTDFEGLFI 10
PT+ +G+FI
Sbjct: 95 PTEIDGVFI 103


>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 1 EPTDFEGLFI 10
E DFEG+ I
Sbjct: 211 EQKDFEGVLI 220


>sp|IF5A_METMP|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain DSM 14266

Query: 2 PTDFEGL 8
PTD EG+
Sbjct: 102 PTDVEGI 108


>sp|Y500_PYRAB|UPF0173 metal-dependent hydrolase PYRAB05000|Pyrococcus abyssi (strain GE5

Query: 2 PTDFEGLFI 10
PT+ +G+FI
Sbjct: 95 PTEVDGVFI 103




240|SequenceR|1205|1196|SSWIAEPTDF

>sp|RL30_HALMA|LARGE ribosomal subunit protein uL30|Haloarcula marismortui (strain

Query: 3 WIAEPTDF 10
W+AE TD+
Sbjct: 83 WVAEHTDY 90


>sp|RL15E_THEVO|LARGE ribosomal subunit protein eL15|Thermoplasma volcanium (strain ATCC

Query: 2 SWIAEPTD 9
SWI+EP +
Sbjct: 150 SWISEPQN 157


>sp|RL15E_THEAC|LARGE ribosomal subunit protein eL15|Thermoplasma acidophilum (strain

Query: 2 SWIAEPTD 9
SWI+EP +
Sbjct: 150 SWISEPQN 157


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 3 WIAEPTD 9
WI EPTD
Sbjct: 122 WIPEPTD 128


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 IAEPTDF 10
IAEP DF
Sbjct: 69 IAEPLDF 75


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SWIAEPTD 9
+W +PTD
Sbjct: 203 AWTVDPTD 210


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 2 SWIAEPTDF 10
S +AEPTD
Sbjct: 30 SRLAEPTDL 38


>sp|RS4E_METAR|SMALL ribosomal subunit protein eS4|Methanocella arvoryzae (strain DSM

Query: 1 SSWIAEP 7
S W+A+P
Sbjct: 22 SKWVAKP 28


>sp|FLAI_SULAC|ARCHAEAL flagellar ATPase motor FlaI|Sulfolobus acidocaldarius (strain ATCC

Query: 1 SSWIAEPT 8
S+W+AE T
Sbjct: 299 SNWVAEVT 306


>sp|SYS2_METKA|TYPE-2 serine--tRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 WIAEPTD 9
WIAEP +
Sbjct: 371 WIAEPEE 377


>sp|RL30_NATPD|LARGE ribosomal subunit protein uL30|Natronomonas pharaonis (strain

Query: 3 WIAEPTDF 10
W+A+ TD+
Sbjct: 83 WVADNTDY 90


>sp|RL30_HALSA|LARGE ribosomal subunit protein uL30|Halobacterium salinarum (strain

Query: 2 SWIAEPTDF 10
+W+AE T++
Sbjct: 82 AWVAEHTEY 90


>sp|RL30_HALS3|LARGE ribosomal subunit protein uL30|Halobacterium salinarum (strain

Query: 2 SWIAEPTDF 10
+W+AE T++
Sbjct: 82 AWVAEHTEY 90


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SSWIAEPTD 9
SSW E TD
Sbjct: 371 SSWRGESTD 379




241|SequenceR|1210|1201|LRRMESSWIA

>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 768 VRRIEDRWIG 777


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 799 VRRIEDRWIG 808


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 768 VRRIEDRWIG 777


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 761 VRRIEDRWIG 770


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 742 VRRIEDRWIG 751


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RRMESSWI 9
RR++ SWI
Sbjct: 112 RRLDVSWI 119


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 814 VRRIEDRWIG 823


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RRMESSWIA 10
RR+E WI
Sbjct: 761 RRIEDRWIG 769


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 810 VRRIEDRWIG 819


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 222 VRRIEDRWIG 231


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 1 LRRMESSWI 9
LRR + SWI
Sbjct: 545 LRRGDYSWI 553


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 828 VRRIEDRWIG 837


>sp|SYT_PYRHO|THREONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LRRMESSWI 9
+RR E WI
Sbjct: 553 IRRAEKEWI 561


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 827 VRRIEDRWIG 836


>sp|SYT_PYRFU|THREONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LRRMESSWI 9
+RR E WI
Sbjct: 553 IRRAEKEWI 561


>sp|SYT_PYRAB|THREONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LRRMESSWI 9
+RR E WI
Sbjct: 553 IRRAEKEWI 561


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 827 VRRIEDRWIG 836


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 686 VRRIEDRWIG 695


>sp|AGLR_HALVD|PROBABLE flippase AglR|Haloferax volcanii (strain ATCC 29605

Query: 1 LRRMESSWI 9
L+RM SW+
Sbjct: 215 LKRMSYSWL 223


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 834 VRRVEDRWIG 843


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 830 VRRIEDRWIG 839


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LRRMESSWIA 10
+RR+E WI
Sbjct: 850 VRRVEDRWIG 859


>sp|Y762_METJA|UNCHARACTERIZED transporter MJ0762|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LRRMESSWIA 10
++ ESSW A
Sbjct: 5 IKNFESSWFA 14




242|SequenceR|1215|1206|IKEIMLRRME

>sp|Y1731_ARCFU|UNCHARACTERIZED protein AF_1731|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKEIMLRRM 9
+KEI+ RRM
Sbjct: 80 VKEILQRRM 88




243|SequenceR|1220|1211|ALHAAIKEIM

>sp|RL11_METBU|LARGE ribosomal subunit protein uL11|Methanococcoides burtonii (strain

Query: 1 ALHAAIKEIM 10
+L AAIKE+M
Sbjct: 116 SLKAAIKEVM 125


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LHAAIKEIM 10
LH A++EI+
Sbjct: 707 LHKAVREIL 715


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LHAAIKEIM 10
LH A++EI+
Sbjct: 707 LHKAVREIL 715


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LHAAIKEIM 10
LH A++EI+
Sbjct: 707 LHKAVREIL 715


>sp|AATC_METBU|A-TYPE ATP synthase subunit C|Methanococcoides burtonii (strain DSM 6242

Query: 1 ALHAAIKEI 9
LH +IKEI
Sbjct: 249 GLHLSIKEI 257


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LHAAIKEI 9
LH A+KEI
Sbjct: 531 LHKAVKEI 538


>sp|RL12_SULAC|LARGE ribosomal subunit protein P1|Sulfolobus acidocaldarius (strain

Query: 2 LHAAIKEI 9
LHAA KEI
Sbjct: 10 LHAAKKEI 17


>sp|MRE11_ARCFU|DNA double-strand break repair protein|Archaeoglobus fulgidus (strain

Query: 2 LHAAIKEIM 10
LH A+KE++
Sbjct: 168 LHQAVKEVV 176


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 3 HAAIKEIM 10
H A+KE++
Sbjct: 870 HVAVKEVL 877




244|SequenceR|1225|1216|RPTFDALHAA

>sp|DHNPA_PYRFU|DIHYDRONEOPTERIN monophosphate aldolase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RPTFDALHA 9
R +FDA HA
Sbjct: 8 RASFDAAHA 16


>sp|ASSY_ARCFU|ARGININOSUCCINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PTFDALHA 9
P FDAL+A
Sbjct: 313 PLFDALNA 320


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 1 RPTFDALHAA 10
RPT DAL A
Sbjct: 76 RPTLDALSRA 85


>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RPTFDALHAA 10
+PT DAL+A
Sbjct: 157 KPTQDALNAG 166


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 FDALHAA 10
FD LHAA
Sbjct: 344 FDCLHAA 350


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 4 FDALHAA 10
FD LHAA
Sbjct: 370 FDCLHAA 376




245|SequenceR|1230|1221|TNSQLRPTFD

>sp|AATC_METST|A-TYPE ATP synthase subunit C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 LRPTFD 10
L+PTFD
Sbjct: 123 LKPTFD 128




246|SequenceR|1235|1226|QYLARTNSQL

>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YLARTNSQ 9
YL RTNSQ
Sbjct: 38 YLVRTNSQ 45




247|SequenceR|1240|1231|PIPCYQYLAR

>sp|RNZ_META3|RIBONUCLEASE Z|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IPCYQYLAR 10
IPCY Y+ +
Sbjct: 142 IPCYAYILK 150


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 1 PIPCYQYLAR 10
P+P Y YL +
Sbjct: 342 PVPVYTYLIK 351


>sp|CPS_METS3|CARBAMOYL-PHOSPHATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PIPCYQYLAR 10
P P YQ LA+
Sbjct: 120 PTPQYQILAK 129


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 2 IPCYQYL 8
+PCY++L
Sbjct: 250 VPCYRFL 256


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 PIPCYQY 7
P+P Y+Y
Sbjct: 110 PVPLYKY 116


>sp|ENO_PYRHO|ENOLASE horikoshii (strain ATCC 700860

Query: 2 IPCYQYLA 9
+P YQYL
Sbjct: 129 LPLYQYLG 136


>sp|ENO_PYRFU|ENOLASE furiosus (strain ATCC 43587

Query: 2 IPCYQYLA 9
+P YQYL
Sbjct: 129 LPLYQYLG 136


>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 2 IPCYQYLA 9
+P YQYL
Sbjct: 129 LPLYQYLG 136


>sp|AROE_PYRIL|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum islandicum (strain DSM 4184

Query: 2 IPCYQYLAR 10
+PC+ LAR
Sbjct: 43 LPCFLQLAR 51


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 1 PIPCYQYLAR 10
P P Y YL +
Sbjct: 321 PTPVYVYLVK 330


>sp|AROE_PYRNV|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 IPCYQYLAR 10
+PC+ LAR
Sbjct: 43 LPCFLKLAR 51




248|SequenceR|1245|1236|PYNIIPIPCY

>sp|GLCDH_METAR|GLUCOSE 1-dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PYNIIPIP 8
P N+IP+P
Sbjct: 134 PENLIPVP 141


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PYNIIP 6
PYN+IP
Sbjct: 347 PYNLIP 352


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 1 PYNIIPIPCY 10
P NIIPI Y
Sbjct: 87 PNNIIPIKDY 96


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PYNIIPIP 8
PY++IP P
Sbjct: 107 PYSMIPCP 114


>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 2 YNIIPIP 8
YNII IP
Sbjct: 323 YNIITIP 329


>sp|ANTRB_HALVD|PUTATIVE ABC transporter anion-binding protein|Haloferax volcanii (strain

Query: 1 PYNIIPI 7
PY +IP+
Sbjct: 248 PYGVIPV 254


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 2 YNIIPIP 8
YN++PIP
Sbjct: 105 YNLLPIP 111


>sp|RRP42_THEKO|EXOSOME complex component Rrp42|Thermococcus kodakarensis (strain ATCC

Query: 1 PYNIIPIP 8
P N +PIP
Sbjct: 188 PVNHVPIP 195


>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 YNIIPIPCY 10
YN P+P Y
Sbjct: 84 YNKPPVPLY 92


>sp|Y351_METJA|UNCHARACTERIZED protein MJ0351|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YNIIPIPCY 10
YNI + CY
Sbjct: 104 YNIKDVQCY 112


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 1 PYNIIPIPC 9
P N+ +PC
Sbjct: 418 PMNLAGVPC 426


>sp|GGGPS_PYRFU|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YNIIPIP 8
YN+ PIP
Sbjct: 122 YNLEPIP 128


>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YNIIPIPCY 10
Y IIP CY
Sbjct: 271 YTIIPEKCY 279


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 2 YNIIPIP 8
YN+ PIP
Sbjct: 436 YNLWPIP 442


>sp|RS27_PYRHO|SMALL ribosomal subunit protein eS27|Pyrococcus horikoshii (strain ATCC

Query: 1 PYNIIPIP 8
P N+IP+P
Sbjct: 4 PRNVIPMP 11


>sp|RS27_PYRAB|SMALL ribosomal subunit protein eS27|Pyrococcus abyssi (strain GE5 /

Query: 1 PYNIIPIP 8
P N+IP+P
Sbjct: 4 PRNVIPMP 11


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 PYNIIP 6
PYN++P
Sbjct: 679 PYNVVP 684


>sp|NADM_METB6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 PYNIIPI 7
PY +IPI
Sbjct: 67 PYYVIPI 73


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 2 YNIIPIPCY 10
+N+ +PCY
Sbjct: 121 FNLDIVPCY 129


>sp|Y003_METJA|UNCHARACTERIZED protein MJ0003|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YNIIPIPC 9
Y II +PC
Sbjct: 42 YGIIQLPC 49


>sp|RS27_THEGJ|SMALL ribosomal subunit protein eS27|Thermococcus gammatolerans (strain

Query: 1 PYNIIPIP 8
P N+IP+P
Sbjct: 4 PKNLIPMP 11


>sp|GGGPS_METJA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YNIIPIP 8
YN+ PIP
Sbjct: 119 YNLEPIP 125




249|SequenceR|1250|1241|ENELQPYNII

>sp|LEUC1_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 1 ENELQPY 7
E ELQPY
Sbjct: 166 EGELQPY 172


>sp|3MGH_METMJ|PUTATIVE 3-methyladenine DNA glycosylase|Methanoculleus marisnigri (strain

Query: 3 ELQPYNII 10
ELQP NI+
Sbjct: 157 ELQPENIV 164


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 1 ENELQPYNI 9
EN LQP+ +
Sbjct: 219 ENRLQPFTL 227


>sp|PYRF_THEKO|OROTIDINE 5'-phosphate decarboxylase|Thermococcus kodakarensis (strain ATCC

Query: 2 NELQPYNII 10
NEL+P+ +I
Sbjct: 133 NELEPFGVI 141


>sp|SYFA_PYRAB|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 ENELQPYNI 9
E EL+P+NI
Sbjct: 218 EVELKPFNI 226


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LQPYNII 10
QPYN++
Sbjct: 447 FQPYNLV 453


>sp|PYRF_PYRHO|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC

Query: 2 NELQPYNII 10
NE++P+ +I
Sbjct: 129 NEIEPFGVI 137


>sp|Y2093_ARCFU|UNCHARACTERIZED protein AF_2093|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ENELQPY 7
ENEL P+
Sbjct: 174 ENELNPF 180


>sp|SYH_METMA|HISTIDINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NELQPY 7
NELQP+
Sbjct: 89 NELQPF 94


>sp|SYH_METAC|HISTIDINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NELQPY 7
NELQP+
Sbjct: 89 NELQPF 94


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 2 NELQPYNII 10
N +QPYN I
Sbjct: 28 NIIQPYNAI 36


>sp|MRE11_METAC|DNA double-strand break repair protein|Methanosarcina acetivorans

Query: 1 ENELQPYNII 10
ENE + YNII
Sbjct: 218 ENEPRSYNII 227


>sp|PYRF_PYRFU|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NELQPYNII 10
NE++P+ +I
Sbjct: 129 NEIKPFGVI 137


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 2 NELQPYNII 10
N +QPYN I
Sbjct: 28 NIIQPYNAI 36


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 2 NELQPYNII 10
N +QPYN I
Sbjct: 28 NIIQPYNAI 36


>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 1 ENELQPYNI 9
+N +QPY I
Sbjct: 29 KNNVQPYKI 37


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 1 ENELQPYNI 9
+N +QPY I
Sbjct: 29 KNNVQPYKI 37


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 4 LQPYNII 10
+QPYN I
Sbjct: 30 IQPYNAI 36


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ENELQPY 7
EN++QP+
Sbjct: 93 ENDIQPF 99


>sp|KAD6_METMA|PUTATIVE adenylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ENELQPY 7
ENELQ Y
Sbjct: 178 ENELQEY 184




250|SequenceR|1255|1246|INCFLENELQ

>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 INCFLEN 7
INCFL++
Sbjct: 61 INCFLDD 67


>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 INCFLENEL 9
I CF+E E+
Sbjct: 51 ITCFIEEEV 59


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 INCFLENE 8
+NC ++NE
Sbjct: 477 VNCLIDNE 484


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 FLENELQ 10
FLENE Q
Sbjct: 936 FLENEFQ 942


>sp|KTHY_ARCFU|PROBABLE thymidylate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CFLEN 7
CFLEN
Sbjct: 156 CFLEN 160




251|SequenceR|1260|1251|QKLYYINCFL

>sp|ALAXM_METMA|ALANYL-TRNA editing protein AlaX-M|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QKLYYINCFL 10
+ LY+++C+L
Sbjct: 3 EALYFLDCYL 12


>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 3 LYYINCFL 10
LY+++C+L
Sbjct: 5 LYFLDCYL 12


>sp|ALAXM_METBF|ALANYL-TRNA editing protein AlaX-M|Methanosarcina barkeri (strain Fusaro /

Query: 1 QKLYYINCFL 10
+ LY+++C++
Sbjct: 3 EALYFLDCYM 12


>sp|HDRB_METKA|COB--COM heterodisulfide reductase subunit B|Methanopyrus kandleri (strain

Query: 2 KLYYINCFL 10
K+Y++N FL
Sbjct: 120 KVYHVNTFL 128


>sp|CDC6_PICTO|ORC1-TYPE DNA replication protein|Picrophilus torridus (strain ATCC 700027

Query: 3 LYYINC 8
++YINC
Sbjct: 88 IHYINC 93


>sp|IF2B_NANEQ|TRANSLATION initiation factor 2 subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 QKLYYINC 8
+K+YYI C
Sbjct: 119 RKIYYIKC 126


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QKLYYINC 8
+KL Y NC
Sbjct: 225 EKLIYSNC 232




252|SequenceR|1265|1256|LTDCLQKLYY

>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 2 TDCLQKLY 9
T+C+QK Y
Sbjct: 144 TECIQKAY 151


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 TDCLQKLYY 10
+DC + +YY
Sbjct: 527 SDCAKAVYY 535




253|SequenceR|1270|1261|WDPFRLTDCL

>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WDPFRLTD 8
++PFRLTD
Sbjct: 113 YEPFRLTD 120


>sp|THIOL_METTH|ACETYL-COA acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 DPFRLTDC 9
DP RL DC
Sbjct: 199 DPLRLLDC 206


>sp|KCY_METBU|CYTIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 WDPFRLTDCL 10
WD F +TD L
Sbjct: 156 WDQFVITDML 165


>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 DPFRLTD 8
D FRLTD
Sbjct: 360 DAFRLTD 366


>sp|PARP_SACSO|NAD(+) ADP-ribosyltransferase|Saccharolobus solfataricus (Sulfolobus

Query: 3 PFRLTD 8
PFR+TD
Sbjct: 79 PFRITD 84


>sp|NADC_METJA|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 4 FRLTDCL 10
FRL DC+
Sbjct: 153 FRLDDCV 159


>sp|FER_THEAC|ZINC-CONTAINING ferredoxin|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DPFRLTDCL 10
DP R +DC+
Sbjct: 117 DPVRESDCI 125




254|SequenceR|1275|1266|PDKIPWDPFR

>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PDKIPWDPF 9
P KIP+DP+
Sbjct: 279 PVKIPFDPY 287


>sp|Y1257_METJA|UNCHARACTERIZED protein MJ1257|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KIPWDPFR 10
KI W PFR
Sbjct: 29 KILWTPFR 36


>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKIPWDP 8
D+IP+DP
Sbjct: 210 DEIPYDP 216


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKIPWD 7
D IPWD
Sbjct: 338 DSIPWD 343


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 3 KIPWDPFR 10
++PWD ++
Sbjct: 112 QVPWDSYK 119


>sp|RRP4_SULTO|EXOSOME complex component Rrp4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KIPWDPF 9
+IPW P+
Sbjct: 26 QIPWSPY 32


>sp|GATA_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PDKIPWD 7
P K PWD
Sbjct: 130 PTKNPWD 136


>sp|SRP54_ACIAM|SIGNAL recognition particle 54 kDa|Acidianus ambivalens (Desulfurolobus

Query: 1 PDKIPW 6
PDKIP+
Sbjct: 94 PDKIPY 99


>sp|LEUC_METB6|3-ISOPROPYLMALATE dehydratase large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 PDKIPWD 7
PDK+ W+
Sbjct: 227 PDKVTWE 233


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PDKIPWDP 8
PDK P DP
Sbjct: 207 PDKAPHDP 214


>sp|RRP4_SACS2|EXOSOME complex component Rrp4|Saccharolobus solfataricus (strain ATCC

Query: 3 KIPWDPF 9
+IPW P+
Sbjct: 29 QIPWSPY 35


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 4 IPWDPF 9
+PWDP
Sbjct: 350 LPWDPL 355


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 IPWDPF 9
+PWDP
Sbjct: 352 LPWDPL 357


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 IPWDPF 9
+PWDP
Sbjct: 350 LPWDPL 355


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 4 IPWDPF 9
+PWDP
Sbjct: 350 LPWDPL 355


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 IPWDPF 9
+PWDP
Sbjct: 350 LPWDPL 355


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 IPWDPF 9
+PWDP
Sbjct: 350 LPWDPL 355


>sp|RRP4_SULAC|EXOSOME complex component Rrp4|Sulfolobus acidocaldarius (strain ATCC

Query: 3 KIPWDPF 9
++PW P+
Sbjct: 27 QVPWSPY 33


>sp|GGGPS_METB6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoregula boonei (strain DSM 21154

Query: 3 KIPWD 7
KIPWD
Sbjct: 107 KIPWD 111


>sp|COBQ_METBU|PROBABLE cobyric acid synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PDKIPWD 7
PDK P+D
Sbjct: 463 PDKDPYD 469


>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKIPWDPFR 10
+K+ WD F+
Sbjct: 496 EKLEWDAFK 504


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 5 PWDPF 9
PW PF
Sbjct: 398 PWHPF 402


>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 1 PDKIPWDP 8
PD+IP+ P
Sbjct: 176 PDQIPFIP 183


>sp|FLPA_METMJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanoculleus marisnigri

Query: 6 WDPFR 10
WDP+R
Sbjct: 28 WDPYR 32


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 4 IPWDPFR 10
+ WDPF+
Sbjct: 552 VDWDPFQ 558


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 1 PDKIPWD 7
P KIP+D
Sbjct: 69 PKKIPYD 75


>sp|GGGPS_CALMQ|GERANYLGERANYLGLYCERYL phosphate synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PDKIPWDPF 9
PDK+ D F
Sbjct: 24 PDKVTMDKF 32


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KIPWDPFR 10
K+P+D FR
Sbjct: 67 KMPFDTFR 74


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 DKIPWDPF 9
+KI WD F
Sbjct: 758 EKIAWDVF 765


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PDKIPWDPF 9
PD+ W+P
Sbjct: 247 PDEATWEPL 255


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 PWDP 8
PWDP
Sbjct: 142 PWDP 145


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 PWDP 8
PWDP
Sbjct: 142 PWDP 145


>sp|HMEC_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus fulgidus

Query: 5 PWDP 8
PWDP
Sbjct: 279 PWDP 282


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DKIPW 6
DK+PW
Sbjct: 197 DKMPW 201


>sp|LEUD2_METKA|3-ISOPROPYLMALATE dehydratase small subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 1 PDKIPW 6
PDK PW
Sbjct: 161 PDKPPW 166


>sp|RL3_METAR|LARGE ribosomal subunit protein uL3|Methanocella arvoryzae (strain DSM

Query: 5 PWDPFR 10
PW+P R
Sbjct: 240 PWNPHR 245


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 2 DKIPW 6
DK+PW
Sbjct: 3 DKLPW 7


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DKIPW 6
DK+PW
Sbjct: 201 DKMPW 205


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KIPWD 7
K+PWD
Sbjct: 499 KLPWD 503


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KIPWD 7
+IPWD
Sbjct: 504 RIPWD 508


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 3 KIPWD 7
K+PWD
Sbjct: 497 KLPWD 501




255|SequenceR|1280|1271|KLLKVPDKIP

>sp|TYSY_METJA|PUTATIVE thymidylate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KLLKVPDKIP 10
KL KVP+K P
Sbjct: 49 KLKKVPEKYP 58


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLKVPDKI 9
L KVPDK+
Sbjct: 431 LFKVPDKV 438


>sp|Y086_METJA|UNCHARACTERIZED protein MJ0086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLKVPDKIP 10
LLK PDK P
Sbjct: 2 LLKSPDKSP 10


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LKVPDKIP 10
LK PD++P
Sbjct: 3 LKTPDEVP 10


>sp|DCD_THEAC|DCTP deaminase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KLLKVPDKI 9
++LK+PD +
Sbjct: 63 EILKIPDDV 71


>sp|SRP54_ACIAM|SIGNAL recognition particle 54 kDa|Acidianus ambivalens (Desulfurolobus

Query: 5 VPDKIP 10
+PDKIP
Sbjct: 93 IPDKIP 98


>sp|NRPA_METMA|NIF-REGULATING protein A|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LKVPDKI 9
LKVP+KI
Sbjct: 15 LKVPEKI 21


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LLKVPDKI 9
L+K+PD+I
Sbjct: 139 LVKIPDEI 146


>sp|GLPK_SACI6|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KLLKVPDKI 9
+LLK+P+ I
Sbjct: 205 ELLKIPESI 213


>sp|GLPK_SACI4|GLYCEROL kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KLLKVPDKI 9
+LLK+P+ I
Sbjct: 205 ELLKIPESI 213


>sp|GLPK_SACI3|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KLLKVPDKI 9
+LLK+P+ I
Sbjct: 205 ELLKIPESI 213


>sp|GLPK_SACI7|GLYCEROL kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KLLKVPDKI 9
+LLK+P+ I
Sbjct: 205 ELLKIPESI 213


>sp|GLPK_SACI2|GLYCEROL kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KLLKVPDKI 9
+LLK+P+ I
Sbjct: 205 ELLKIPESI 213


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLLKVPDKI 9
+LLK+P+ I
Sbjct: 204 ELLKIPESI 212


>sp|GLPK1_SACS2|GLYCEROL kinase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLLKVPDKI 9
+LLK+P+ I
Sbjct: 205 ELLKIPESI 213




256|SequenceR|1285|1276|ADLTDKLLKV

>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ADLTDKLLKV 10
AD DKL+KV
Sbjct: 404 ADTIDKLMKV 413


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 DLTDKLLK 9
DLTD++LK
Sbjct: 11 DLTDEMLK 18


>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ADLTDKLLKV 10
ADL D+LL V
Sbjct: 28 ADLQDRLLYV 37


>sp|PSB1_THEPD|PROTEASOME subunit beta 1|Thermofilum pendens (strain DSM 2475

Query: 1 ADLTDKLLK 9
ADL DK+LK
Sbjct: 3 ADLRDKVLK 11


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ADLTDKLLKV 10
+DL +KLLK+
Sbjct: 499 SDLREKLLKI 508




257|SequenceR|1290|1281|VEKKWADLTD

>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 2 EKKWADLT 9
E++WADL+
Sbjct: 64 EERWADLS 71


>sp|Y718_METJA|UNCHARACTERIZED transporter MJ0718|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EKKWAD 7
EKKW D
Sbjct: 54 EKKWMD 59


>sp|Y1509_METJA|UNCHARACTERIZED protein MJ1509|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEKKWADL 8
VEKK ADL
Sbjct: 35 VEKKLADL 42


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 4 KWADLTD 10
+WADL D
Sbjct: 400 QWADLVD 406


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 2 EKKWADLT 9
+++WADL+
Sbjct: 64 QERWADLS 71


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 3 KKWADLT 9
K+W+D+T
Sbjct: 52 KRWSDMT 58


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 4 KWADLTD 10
KWAD+ D
Sbjct: 774 KWADVAD 780




258|SequenceR|1295|1286|PPKKEVEKKW

>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PPKKEV 6
PPKKEV
Sbjct: 527 PPKKEV 532


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PPKKEV 6
PPKKEV
Sbjct: 527 PPKKEV 532


>sp|METK_THEVO|S-ADENOSYLMETHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PKKEVE 7
PKKEVE
Sbjct: 16 PKKEVE 21


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PKKEVE 7
PKKEVE
Sbjct: 16 PKKEVE 21


>sp|TRPB1_ARCFU|TRYPTOPHAN synthase beta chain 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPKKEVEKKW 10
PP +E+EK +
Sbjct: 30 PPLEELEKAY 39


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PPKKEVEKKW 10
PP + +KKW
Sbjct: 106 PPALDRQKKW 115


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 3 KKEVEKKW 10
+KEVE+KW
Sbjct: 50 RKEVEEKW 57


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KEVEKKW 10
KE+EKKW
Sbjct: 8 KEIEKKW 14


>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 PPKKEVEKKW 10
P KEV +KW
Sbjct: 377 PKAKEVAQKW 386


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PKKEVEKK 9
P+K VEKK
Sbjct: 259 PRKIVEKK 266


>sp|METK_METMP|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PPKKEVEKKW 10
P KEV +KW
Sbjct: 377 PKAKEVAQKW 386


>sp|METK_METM6|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 PPKKEVEKKW 10
P KEV +KW
Sbjct: 377 PKAKEVAQKW 386


>sp|METK_METM5|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 PPKKEVEKKW 10
P KEV +KW
Sbjct: 377 PKAKEVAQKW 386


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PPKKEVEK 8
PP KEVE+
Sbjct: 247 PPGKEVEQ 254


>sp|DNAG_PYRIL|DNA primase DnaG|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PPKKEVEK 8
PP KEVE+
Sbjct: 247 PPGKEVEQ 254


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PPKKEVEKKW 10
PP++ +EK W
Sbjct: 326 PPREYMEKVW 335


>sp|DNAG_PYRCJ|DNA primase DnaG|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PPKKEVEK 8
PP KEVE+
Sbjct: 247 PPGKEVEQ 254


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 3 KKEVEKKW 10
KKE+EKK+
Sbjct: 603 KKEIEKKY 610


>sp|DNAG_PYRAR|DNA primase DnaG|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PPKKEVEK 8
PP KEVE+
Sbjct: 247 PPGKEVEQ 254


>sp|DNAG_PYRNV|DNA primase DnaG|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PPKKEVEK 8
PP KEVE+
Sbjct: 247 PPGKEVEQ 254


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 KEVEKKW 10
KEVE+KW
Sbjct: 11 KEVEEKW 17


>sp|DNAG_PYRAE|DNA primase DnaG|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPKKEVEK 8
PP KEVE+
Sbjct: 247 PPGKEVEQ 254


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KEVEKKW 10
EVEKKW
Sbjct: 13 NEVEKKW 19


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 PPKKEVEKKW 10
P KE+ +KW
Sbjct: 377 PKAKEIAQKW 386


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PKKEVEKK 9
P KEV+KK
Sbjct: 211 PVKEVDKK 218




259|SequenceR|1300|1291|DISMMPPKKE

>sp|WTPC_PYRFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus furiosus (strain ATCC

Query: 1 DISMMPPKK 9
DI+++PP+K
Sbjct: 63 DITLLPPEK 71


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DISMMPP 7
DIS++PP
Sbjct: 564 DISLIPP 570


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SMMPPKK 9
++MPPKK
Sbjct: 53 TIMPPKK 59


>sp|PDAD_META3|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus aeolicus (strain ATCC

Query: 3 SMMPPKKE 10
S+MPPK E
Sbjct: 53 SIMPPKAE 60


>sp|PDAD_METVS|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus vannielii (strain ATCC 35089

Query: 3 SMMPPKKE 10
S+MPPK E
Sbjct: 52 SIMPPKAE 59


>sp|WTPC_PYRHO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus horikoshii (strain

Query: 1 DISMMPPKK 9
DI+ +PP+K
Sbjct: 63 DITGLPPEK 71


>sp|WTPC_METJA|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Methanocaldococcus jannaschii

Query: 1 DISMMPPKK 9
DI+ +PP+K
Sbjct: 62 DITNLPPEK 70


>sp|WTPC_THEKO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Thermococcus kodakarensis (strain

Query: 1 DISMMPPKK 9
DI+ +PP+K
Sbjct: 64 DITDLPPEK 72


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SMMPPKKE 10
+ +PPKKE
Sbjct: 524 AFVPPKKE 531


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 3 SMMPPKKE 10
+ +PPKKE
Sbjct: 524 AFVPPKKE 531


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SMMPPKK 9
SMMP KK
Sbjct: 271 SMMPQKK 277




260|SequenceR|1305|1296|VEYADDISMM

>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 1 VEYADDISMM 10
+EYADD+ M
Sbjct: 214 IEYADDLREM 223


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EYADDIS 8
EYADDI
Sbjct: 362 EYADDIK 368


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VEYADDI 7
+EYA+DI
Sbjct: 408 IEYANDI 414


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VEYADDI 7
+EYA+DI
Sbjct: 408 IEYANDI 414


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VEYADDI 7
+EYA+DI
Sbjct: 408 IEYANDI 414


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VEYADDI 7
+EYA+DI
Sbjct: 408 IEYANDI 414


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VEYADDI 7
+EYA+DI
Sbjct: 408 IEYANDI 414


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VEYADDI 7
+EYA+DI
Sbjct: 408 IEYANDI 414


>sp|GLYA_NATPD|SERINE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EYADDI 7
EYADDI
Sbjct: 243 EYADDI 248


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 EYADDI 7
EYADDI
Sbjct: 243 EYADDI 248


Query: 2 EYADDISMM 10
EYADD+ +
Sbjct: 67 EYADDVEEL 75


>sp|MTAD_THESM|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 4 ADDISMM 10
ADDIS+M
Sbjct: 72 ADDISLM 78


>sp|PSA_METJA|PROTEASOME subunit alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EYADDISM 9
EY DDI++
Sbjct: 180 EYRDDITL 187


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 VEYADDISMM 10
VEY D+I ++
Sbjct: 232 VEYLDEIGLL 241


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 1 VEYADDISM 9
V+Y DDI M
Sbjct: 309 VDYLDDIGM 317


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 EYADDISMM 10
EYADD+ +
Sbjct: 67 EYADDVEEL 75


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 EYADDISMM 10
EYADD+ +
Sbjct: 67 EYADDVEEL 75


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 1 VEYADDIS 8
+EYA+DI+
Sbjct: 254 LEYAEDIA 261




261|SequenceR|1310|1301|QPLNLVEYAD

>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QPLNLVE 7
QP NLVE
Sbjct: 448 QPYNLVE 454


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PLNLVEY 8
P N+VEY
Sbjct: 563 PFNIVEY 569


>sp|NADE_THESM|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 2 PLNLVEYAD 10
PLN VEY +
Sbjct: 228 PLNKVEYVE 236


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 1 QPLNLVEYAD 10
+PL E+AD
Sbjct: 388 RPLTFAEFAD 397


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 NLVEYAD 10
NLVEYA+
Sbjct: 184 NLVEYAN 190


>sp|LIPA_SACS2|LIPOYL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QPLNLVEYAD 10
Q LN+++YA+
Sbjct: 176 QSLNVLKYAE 185


>sp|TOP6A_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QPLNLVEY 8
QP ++VEY
Sbjct: 290 QPADIVEY 297




262|SequenceR|1315|1306|HPGQGQPLNL

>sp|Y1141_METJA|UNCHARACTERIZED protein MJ1141|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGQGQPL 8
P QGQPL
Sbjct: 186 PSQGQPL 192


>sp|Y644_METJA|UNCHARACTERIZED protein MJ0644|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGQGQPLNL 10
P G+PLNL
Sbjct: 131 PNAGKPLNL 139


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 3 GQGQPLNL 10
G+GQPL L
Sbjct: 273 GEGQPLGL 280


>sp|DAPAL_HALSA|UNCHARACTERIZED DapA-like lyase VNG_0444G|Halobacterium salinarum (strain ATCC

Query: 2 PGQGQPLNL 10
PG G PL L
Sbjct: 8 PGSGDPLGL 16


>sp|DAPAL_HALS3|UNCHARACTERIZED DapA-like lyase OE_1665R|Halobacterium salinarum (strain ATCC

Query: 2 PGQGQPLNL 10
PG G PL L
Sbjct: 8 PGSGDPLGL 16


>sp|NADM_SACS2|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HPGQGQPLNL 10
+PG+ QP +L
Sbjct: 6 YPGRFQPFHL 15


>sp|ILVC_METHJ|KETOL-ACID reductoisomerase (NADP(+))|Methanospirillum hungatei JF-1 (strain

Query: 3 GQGQPLNL 10
G+GQ LNL
Sbjct: 29 GRGQALNL 36


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 1 HPGQGQPL 8
HPG QP+
Sbjct: 371 HPGNIQPV 378


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 3 GQGQPLNL 10
G GQPL L
Sbjct: 274 GDGQPLGL 281


>sp|PYRB_NATPD|ASPARTATE carbamoyltransferase catalytic subunit|Natronomonas pharaonis

Query: 1 HPGQGQP 7
HP +G P
Sbjct: 104 HPSEGSP 110


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 1 HPGQGQPLNL 10
H G G P++L
Sbjct: 75 HTGYGSPVSL 84


>sp|ILVC_METB6|KETOL-ACID reductoisomerase (NADP(+))|Methanoregula boonei (strain DSM 21154

Query: 3 GQGQPLNL 10
G+GQ LNL
Sbjct: 29 GRGQSLNL 36


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain

Query: 3 GQGQPLNL 10
G+GQ LNL
Sbjct: 29 GRGQALNL 36


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 3 GQGQPLNL 10
G+GQ LNL
Sbjct: 29 GRGQALNL 36




263|SequenceR|1320|1311|IKSEDHPGQG

>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 3 SEDHPG 8
SEDHPG
Sbjct: 527 SEDHPG 532


>sp|Y1515_METJA|UNCHARACTERIZED protein MJ1515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KSEDHP 7
+SEDHP
Sbjct: 25 RSEDHP 30


>sp|CSA5B_SACS2|CRISPR type I-A cluster 2/Apern-associated|Saccharolobus solfataricus

Query: 1 IKSEDHPGQG 10
I+ +D+P QG
Sbjct: 70 IQGKDYPAQG 79


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 SEDHPGQG 10
+EDHP +G
Sbjct: 331 AEDHPRRG 338


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 IKSEDHP 7
I +EDHP
Sbjct: 528 IATEDHP 534


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKSEDHPGQG 10
+KS D+P G
Sbjct: 861 VKSIDYPNNG 870


>sp|RS4_METKA|SMALL ribosomal subunit protein uS4|Methanopyrus kandleri (strain AV19 /

Query: 1 IKSEDHP 7
+K EDHP
Sbjct: 163 LKDEDHP 169


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SEDHP 7
SEDHP
Sbjct: 178 SEDHP 182


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 3 SEDHP 7
SEDHP
Sbjct: 170 SEDHP 174




264|SequenceR|1325|1316|FYAKRIKSED

>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 FYAKRIKSED 10
Y+K IKSED
Sbjct: 109 LYSKDIKSED 118


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 FYAKRIKSED 10
Y+K IKSED
Sbjct: 109 LYSKDIKSED 118


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 FYAKRIKSED 10
Y+K IKSED
Sbjct: 109 LYSKDIKSED 118


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain M.16.4

Query: 1 FYAKRIKSED 10
Y+K IKSED
Sbjct: 109 LYSKDIKSED 118


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 FYAKRIKSED 10
Y+K IKSED
Sbjct: 109 LYSKDIKSED 118


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 FYAKRIKSED 10
Y+K IKSED
Sbjct: 109 LYSKDIKSED 118


>sp|PURA_HALSA|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 2 YAKRIKSED 10
YA RI+ ED
Sbjct: 197 YADRIRDED 205


>sp|PURA_HALS3|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 2 YAKRIKSED 10
YA RI+ ED
Sbjct: 197 YADRIRDED 205


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 1 FYAKRIKSED 10
Y+K IKSED
Sbjct: 109 LYSKDIKSED 118


>sp|Y1312_METJA|UPF0026 protein MJ1312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FYAKRIKSED 10
FY K IKS D
Sbjct: 306 FYMKNIKSRD 315


>sp|RPO3_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus solfataricus (strain ATCC

Query: 1 FYAKRIKSED 10
Y+K IKSED
Sbjct: 109 IYSKDIKSED 118


>sp|HPPA2_METMA|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina mazei (strain

Query: 1 FYAKRIKSED 10
F+AK I ED
Sbjct: 21 FFAKSILKED 30


>sp|HPPA2_METAC|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina acetivorans

Query: 1 FYAKRIKSED 10
F+AK I ED
Sbjct: 21 FFAKSILKED 30


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 FYAKRIKS 8
FY+KRI S
Sbjct: 138 FYSKRIAS 145


>sp|RL18_THEKO|LARGE ribosomal subunit protein uL18|Thermococcus kodakarensis (strain

Query: 2 YAKRIKSED 10
YAK +K ED
Sbjct: 152 YAKALKEED 160


>sp|RL18_PYRCJ|LARGE ribosomal subunit protein uL18|Pyrobaculum calidifontis (strain DSM

Query: 2 YAKRIKSE 9
YAKR+K E
Sbjct: 151 YAKRLKEE 158


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FYAKRIKSE 9
FY K+ KSE
Sbjct: 316 FYLKKTKSE 324


>sp|RL18_THEON|LARGE ribosomal subunit protein uL18|Thermococcus onnurineus (strain NA1)

Query: 2 YAKRIKSED 10
YAK +K ED
Sbjct: 152 YAKALKEED 160


>sp|RL18_THEGJ|LARGE ribosomal subunit protein uL18|Thermococcus gammatolerans (strain

Query: 2 YAKRIKSED 10
YAK +K ED
Sbjct: 152 YAKALKQED 160


>sp|BRIX_METAC|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 1 FYAKRIKSED 10
F+ KR++SE+
Sbjct: 110 FHFKRVESEE 119


>sp|RL18_SACI1|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 YAKRIKSED 10
YA+++KSE+
Sbjct: 151 YAEKLKSEN 159


>sp|RL18_SACS2|LARGE ribosomal subunit protein uL18|Saccharolobus solfataricus (strain

Query: 2 YAKRIKSED 10
YA+++KSE+
Sbjct: 154 YAEKLKSEN 162


>sp|RL18_SACI7|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 YAKRIKSED 10
YA+++KSE+
Sbjct: 151 YAEKLKSEN 159


>sp|RL18_SACI6|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 YAKRIKSED 10
YA+++KSE+
Sbjct: 151 YAEKLKSEN 159


>sp|RL18_SACI4|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 YAKRIKSED 10
YA+++KSE+
Sbjct: 151 YAEKLKSEN 159


>sp|RL18_SACI3|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 YAKRIKSED 10
YA+++KSE+
Sbjct: 151 YAEKLKSEN 159


>sp|RL18_SACI2|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 YAKRIKSED 10
YA+++KSE+
Sbjct: 151 YAEKLKSEN 159




265|SequenceR|1330|1321|KQALRFYAKR

>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QALRFYAKR 10
+ALRFYA +
Sbjct: 301 RALRFYAMK 309


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KQALRFYAK 9
KQALR Y K
Sbjct: 134 KQALREYVK 142




266|SequenceR|1335|1326|KDPHYKQALR

>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KDPHYKQAL 9
+ PH++QAL
Sbjct: 311 QKPHFQQAL 319


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KDPHYKQAL 9
+ PH++QAL
Sbjct: 309 QKPHFQQAL 317


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 DPHYKQALR 10
DPH+++ LR
Sbjct: 930 DPHHEELLR 938


>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KDPHYKQAL 9
KDP YKQ++
Sbjct: 84 KDPIYKQSV 92


>sp|RL10E_PYRAE|LARGE ribosomal subunit protein uL16|Pyrobaculum aerophilum (strain ATCC

Query: 3 PHYKQALR 10
PH K+ALR
Sbjct: 147 PHIKEALR 154


>sp|RPO2N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 KDPHYKQALR 10
K+P KQA+R
Sbjct: 396 KEPSVKQAVR 405


>sp|CAS2_HYPBU|CRISPR-ASSOCIATED endoribonuclease Cas2|Hyperthermus butylicus (strain DSM 5456

Query: 2 DPHYKQALR 10
DP KQA+R
Sbjct: 85 DPKQKQAVR 93


>sp|CDC63_SACS2|ORC1-TYPE DNA replication protein 3|Saccharolobus solfataricus (strain ATCC

Query: 4 HYKQALR 10
HYK ALR
Sbjct: 295 HYKLALR 301


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 KDPHYKQALR 10
K+P KQA+R
Sbjct: 401 KEPSVKQAVR 410


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 DPHYKQA 8
DPH K+A
Sbjct: 403 DPHSKEA 409


>sp|RLME_METS3|RIBOSOMAL RNA large subunit methyltransferase|Methanobrevibacter smithii

Query: 2 DPHYKQA 8
DP+YK+A
Sbjct: 12 DPYYKKA 18




267|SequenceR|1340|1331|RGEPNKDPHY

>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 3 EPNKDPH 9
EP++DPH
Sbjct: 231 EPSRDPH 237


>sp|Y3544_METJA|UNCHARACTERIZED protein MJECL44|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RGEPNKDPHY 10
RG PN + HY
Sbjct: 210 RGNPNFNNHY 219


>sp|RTCA_DESA1|RNA 3'-terminal phosphate cyclase|Desulfurococcus amylolyticus (strain

Query: 4 PNKDPH 9
P+KDPH
Sbjct: 233 PDKDPH 238


>sp|RL13_METKA|LARGE ribosomal subunit protein uL13|Methanopyrus kandleri (strain AV19

Query: 1 RGEPNKDPHY 10
RG+P K P Y
Sbjct: 69 RGDPKKGPFY 78


>sp|Y280_STAMF|UNCHARACTERIZED solute-binding protein Smar_0280|Staphylothermus marinus (strain

Query: 3 EPNKDP 8
+PNKDP
Sbjct: 154 DPNKDP 159


>sp|RSMA_NATPD|PROBABLE ribosomal RNA small subunit|Natronomonas pharaonis (strain ATCC

Query: 1 RGEPNKDPHY 10
RG+P +D H+
Sbjct: 14 RGDPERDQHF 23


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 RGEPNKDPHY 10
RG+P DP +
Sbjct: 10 RGDPEDDPAW 19


>sp|RSMA_HALWD|PROBABLE ribosomal RNA small subunit|Haloquadratum walsbyi (strain DSM

Query: 2 GEPNKDPHY 10
G+PN D H+
Sbjct: 37 GDPNFDQHF 45


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GEPNKDPH 9
GEP K PH
Sbjct: 92 GEPLKIPH 99


>sp|ACDD2_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 GEPNKDP 8
G P KDP
Sbjct: 234 GNPQKDP 240


>sp|ACDD1_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 GEPNKDP 8
G P KDP
Sbjct: 234 GNPQKDP 240


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GEPNKDPH 9
G PNK+ H
Sbjct: 455 GRPNKETH 462


>sp|ACDD1_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 GEPNKDP 8
G P KDP
Sbjct: 234 GNPQKDP 240


>sp|ACDD_METMA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina mazei

Query: 2 GEPNKDP 8
G P KDP
Sbjct: 234 GNPQKDP 240


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 GEPNKDP 8
G P KDP
Sbjct: 235 GNPQKDP 241


>sp|COFE_HALSA|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RGEPNKDPH 9
RGE ++D H
Sbjct: 177 RGETDRDGH 185


>sp|COFE_HALS3|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RGEPNKDPH 9
RGE ++D H
Sbjct: 177 RGETDRDGH 185


>sp|HPRT_METMA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC

Query: 2 GEPNKDPH 9
G P+ DPH
Sbjct: 30 GVPSIDPH 37


>sp|HPRT_METBF|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GEPNKDPH 9
G P+ DPH
Sbjct: 30 GVPSIDPH 37


>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 3 EPNKDPHY 10
E KDPH+
Sbjct: 230 EQGKDPHF 237


>sp|G1PDH_META3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus aeolicus (strain ATCC

Query: 1 RGEPNKD 7
R EPNK+
Sbjct: 58 RNEPNKE 64


>sp|ACDD_METTH|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanothermobacter

Query: 2 GEPNKDP 8
G+P KDP
Sbjct: 189 GDPEKDP 195


>sp|Y2213_SACS2|UPF0284 protein SSO2213|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RGEPNKD 7
+GEP KD
Sbjct: 110 QGEPGKD 116


>sp|Y030_SACI7|UPF0284 protein YG5714_0030|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RGEPNKD 7
+GEP KD
Sbjct: 110 QGEPGKD 116


>sp|Y030_SACI6|UPF0284 protein M164_0030|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RGEPNKD 7
+GEP KD
Sbjct: 110 QGEPGKD 116


>sp|Y030_SACI4|UPF0284 protein M1425_0030|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RGEPNKD 7
+GEP KD
Sbjct: 110 QGEPGKD 116


>sp|Y030_SACI3|UPF0284 protein M1627_0030|Saccharolobus islandicus (strain M.16.27)

Query: 1 RGEPNKD 7
+GEP KD
Sbjct: 110 QGEPGKD 116


>sp|Y030_SACI2|UPF0284 protein LS215_0030|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RGEPNKD 7
+GEP KD
Sbjct: 110 QGEPGKD 116


>sp|Y030_SACI1|UPF0284 protein YN1551_0030|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RGEPNKD 7
+GEP KD
Sbjct: 110 QGEPGKD 116


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 NKDPH 9
NKDPH
Sbjct: 304 NKDPH 308


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 RGEPNKDPH 9
RGEP K H
Sbjct: 218 RGEPEKALH 226


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 NKDPH 9
NKDPH
Sbjct: 304 NKDPH 308


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RGEPNKDPH 9
+GE NKD H
Sbjct: 62 KGEDNKDIH 70


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RGEPNKDPH 9
RGEP K H
Sbjct: 218 RGEPEKALH 226


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 NKDPH 9
NKDPH
Sbjct: 304 NKDPH 308


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 5 NKDPH 9
NKDPH
Sbjct: 304 NKDPH 308


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 NKDPH 9
NKDPH
Sbjct: 304 NKDPH 308


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 RGEPNKDPH 9
RGEP K H
Sbjct: 218 RGEPEKALH 226


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 RGEPNKDPH 9
RGEP K H
Sbjct: 218 RGEPEKALH 226


>sp|ACDG1_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 2 GEPNKD 7
GEP+KD
Sbjct: 348 GEPDKD 353


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GEPNKDPH 9
G P +DP+
Sbjct: 384 GRPGRDPY 391


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 3 EPNKDPH 9
E KDPH
Sbjct: 229 EQGKDPH 235




268|SequenceR|1345|1336|KEFMDRGEPN

>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 3 FMDRGEPN 10
FM RG+PN
Sbjct: 150 FMSRGDPN 157


>sp|KAD_METBF|ADENYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KEFMDRGE 8
KE+MD+GE
Sbjct: 50 KEYMDKGE 57


>sp|KAD_ARCFU|ADENYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KEFMDRGE 8
KE+MD+GE
Sbjct: 50 KEYMDKGE 57


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 KEFMDRG 7
KEF+DRG
Sbjct: 524 KEFVDRG 530


>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KEFMDRGEPN 10
K+F++ G+PN
Sbjct: 227 KQFIEIGDPN 236


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 1 KEFMDRGEP 9
K++MD G+P
Sbjct: 367 KDYMDVGQP 375


>sp|PCNA_META3|DNA polymerase sliding clamp|Methanococcus aeolicus (strain ATCC

Query: 1 KEFMDRGEPN 10
K+ M+R +PN
Sbjct: 74 KKIMNRAKPN 83


>sp|PURQ_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KEFMDRGEP 9
+EF+D G+P
Sbjct: 84 REFVDDGKP 92


>sp|KAD_METAC|ADENYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KEFMDRGE 8
K +MD+GE
Sbjct: 50 KAYMDKGE 57


>sp|RPO5_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermoplasma volcanium (strain ATCC

Query: 1 KEFMDRGEPN 10
KEF+ R PN
Sbjct: 34 KEFLPRISPN 43


>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KEFMDRGEP 9
K+FM+ G P
Sbjct: 233 KQFMEIGSP 241


>sp|KAD_METMA|ADENYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KEFMDRGE 8
K +MD+GE
Sbjct: 50 KAYMDKGE 57


>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KEFMDRGE 8
K +MD+GE
Sbjct: 50 KSYMDKGE 57


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 KEFMDRGEPN 10
KE+M++ PN
Sbjct: 283 KEYMEQFSPN 292


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 KEFMDRGEPN 10
KE+M++ PN
Sbjct: 283 KEYMEQFSPN 292


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KEFMDRGEPN 10
KE+M++ PN
Sbjct: 283 KEYMEQFSPN 292


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 KEFMDRGE 8
K FMDR E
Sbjct: 669 KRFMDRNE 676




269|SequenceR|1350|1341|YAKNVKEFMD

>sp|PYRF_METMA|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina mazei (strain ATCC

Query: 2 AKNVKEFMD 10
A+NV+EF+D
Sbjct: 23 AENVREFVD 31


>sp|ARTE_METJA|PROBABLE archaeosortase E|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YAKNVKEFM 9
Y+KN+KEF+
Sbjct: 106 YSKNIKEFI 114


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KNVKEFM 9
KN++EFM
Sbjct: 146 KNIREFM 152


>sp|HEM1_METHJ|GLUTAMYL-TRNA reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AKNVKEFMD 10
A+ V+EF+D
Sbjct: 314 AEKVREFLD 322


>sp|DPHB_METBF|DIPHTHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YAKNVKEF 8
YA+N+K+F
Sbjct: 221 YAENLKDF 228


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 5 VKEFMD 10
VKEFMD
Sbjct: 235 VKEFMD 240


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 5 VKEFMD 10
VKEFMD
Sbjct: 235 VKEFMD 240


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 5 VKEFMD 10
VKEFMD
Sbjct: 235 VKEFMD 240


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 5 VKEFMD 10
VKEFMD
Sbjct: 235 VKEFMD 240


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 5 VKEFMD 10
VKEFMD
Sbjct: 237 VKEFMD 242


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 5 VKEFMD 10
VKEFMD
Sbjct: 260 VKEFMD 265


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 1 YAKNVKEF 8
YAK VK+F
Sbjct: 182 YAKIVKDF 189


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 2 AKNVKEFMD 10
K VKEFM+
Sbjct: 960 PKEVKEFME 968


>sp|TRPB_THEVO|TRYPTOPHAN synthase beta chain|Thermoplasma volcanium (strain ATCC 51530

Query: 2 AKNVKEFM 9
AKN++EF+
Sbjct: 81 AKNLEEFL 88


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 YAKNVKEFMD 10
+ N KEF+D
Sbjct: 140 FPDNTKEFVD 149


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 2 AKNVKEFMD 10
AKN KEF +
Sbjct: 168 AKNYKEFSE 176


>sp|Y1673_METJA|UNCHARACTERIZED protein MJ1673|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YAKNVKEFMD 10
Y K +KEF++
Sbjct: 53 YLKPIKEFLE 62


>sp|PTR2_METJA|HTH-TYPE transcriptional regulator Ptr2|Methanocaldococcus jannaschii

Query: 1 YAKNVKEFMD 10
+AK+ KEF D
Sbjct: 106 WAKDGKEFSD 115




270|SequenceR|1355|1346|TCLFEYAKNV

>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LFEYAKNV 10
LFEYAKN+
Sbjct: 1032 LFEYAKNI 1039


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 1 TCLFEYAKNV 10
T LF+YAK+V
Sbjct: 177 TKLFDYAKDV 186


>sp|ENDA_METJA|TRNA-SPLICING endonuclease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LFEYAKNV 10
L+EYA+NV
Sbjct: 74 LYEYARNV 81


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 1 TCLFEY 6
TC+FEY
Sbjct: 254 TCMFEY 259


>sp|Y883_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 2 CLFEYAKN 9
C+F YAK+
Sbjct: 120 CIFPYAKD 127


>sp|TRPC_SULTO|INDOLE-3-GLYCEROL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LFEYAKNV 10
L+EYA+N+
Sbjct: 144 LYEYARNL 151


>sp|Y957_METJA|UNCHARACTERIZED protein MJ0957|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CLFEYAKNV 10
CL+ Y KNV
Sbjct: 235 CLWNYEKNV 243


>sp|SYT_METKA|THREONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 CLFEYAKNV 10
CL EY +N+
Sbjct: 231 CLAEYVENL 239


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans (strain

Query: 3 LFEYAKN 9
+FEY KN
Sbjct: 261 IFEYEKN 267




271|SequenceR|1360|1351|IKASKTCLFE

>sp|XERA_PYRHO|TYROSINE recombinase XerA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IKASKTCLFE 10
I SKT LFE
Sbjct: 167 IPISKTLLFE 176




272|SequenceR|1365|1356|DPGDVIKASK

>sp|FLAG_METJA|PUTATIVE flagella-related protein G|Methanocaldococcus jannaschii (strain

Query: 1 DPGDVIKAS 9
DPGD+++ S
Sbjct: 60 DPGDIVRNS 68


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DPGDVIKA 8
DPGDV+ A
Sbjct: 31 DPGDVVYA 38


>sp|RPO5_META3|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus aeolicus (strain ATCC

Query: 2 PGDVIKASK 10
PGDV+K S+
Sbjct: 51 PGDVVKISR 59


>sp|NIKR_PYRHO|PUTATIVE nickel-responsive regulator|Pyrococcus horikoshii (strain ATCC

Query: 1 DPGDVIKA 8
D GDV+KA
Sbjct: 65 DEGDVVKA 72


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DPGDVIKA 8
DPGD++ A
Sbjct: 31 DPGDIVYA 38


>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 1 DPGDVIKA 8
+PGDVI++
Sbjct: 361 EPGDVIRS 368


>sp|RPO5_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo5|Sulfolobus acidocaldarius (strain

Query: 2 PGDVIKASK 10
PGD+IK ++
Sbjct: 59 PGDIIKITR 67


>sp|PELO_METJA|PROTEIN pelota homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPGDVIKASK 10
D GDVI+A +
Sbjct: 46 DKGDVIRADR 55


>sp|RPO5_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo5|Sulfurisphaera tokodaii (strain DSM

Query: 2 PGDVIKASK 10
PGD+IK ++
Sbjct: 59 PGDIIKITR 67


>sp|RPO5_METMP|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus maripaludis (strain DSM

Query: 2 PGDVIKASK 10
PGDV+K ++
Sbjct: 51 PGDVVKITR 59


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 1 DPGDVIKAS 9
DP DV+KA+
Sbjct: 62 DPEDVVKAA 70


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DPGDVIKASK 10
PGD+I+ K
Sbjct: 28 SPGDIIRVEK 37


>sp|RPO5_METM6|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus maripaludis (strain C6

Query: 2 PGDVIKASK 10
PGDV+K ++
Sbjct: 51 PGDVLKITR 59


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC

Query: 2 PGDVIKA 8
PGDVI+A
Sbjct: 20 PGDVIEA 26


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 PGDVIKA 8
PGDVI+A
Sbjct: 22 PGDVIEA 28


>sp|RPO5_METM7|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus maripaludis (strain C7

Query: 2 PGDVIKASK 10
PGDV+K ++
Sbjct: 51 PGDVLKITR 59


>sp|RPO5_METBU|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcoides burtonii (strain DSM

Query: 1 DPGDVIK 7
+PGDV+K
Sbjct: 53 EPGDVVK 59


>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 DPGDVIKA 8
DPGDV+ A
Sbjct: 110 DPGDVMIA 117


>sp|RPO5_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo5|Archaeoglobus fulgidus (strain ATCC

Query: 2 PGDVIKASK 10
PGD++K ++
Sbjct: 53 PGDIVKITR 61


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii

Query: 2 PGDVIKASK 10
PGDV+ SK
Sbjct: 85 PGDVVLVSK 93


>sp|LEUD_PYRHO|3-ISOPROPYLMALATE dehydratase small subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 PGDVIKASK 10
PGDV+ A K
Sbjct: 51 PGDVVVAGK 59


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 DPGDVIK 7
DPGD+I+
Sbjct: 261 DPGDMIE 267


>sp|RPO5_METS5|DNA-DIRECTED RNA polymerase subunit Rpo5|Metallosphaera sedula (strain ATCC

Query: 2 PGDVIKASK 10
PGD++K ++
Sbjct: 58 PGDIVKITR 66


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PGDVIK 7
PGDVIK
Sbjct: 308 PGDVIK 313


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DPGDVIKAS 9
+PGDV++ S
Sbjct: 145 NPGDVLELS 153


>sp|RPO5_METM5|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanococcus maripaludis (strain C5

Query: 2 PGDVIKASK 10
PGDV+K ++
Sbjct: 51 PGDVLKITR 59


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 DPGDVI 6
DPGDV+
Sbjct: 420 DPGDVV 425


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DPGDVIKAS 9
+PGDV++ S
Sbjct: 145 NPGDVLELS 153


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DPGDVIKAS 9
+PGDV++ S
Sbjct: 145 NPGDVLELS 153


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DPGDVIKAS 9
+PGDV++ S
Sbjct: 145 NPGDVLELS 153


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DPGDVIKAS 9
+PGDV++ S
Sbjct: 145 NPGDVLELS 153


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DPGDVIKAS 9
+PGDV++ S
Sbjct: 145 NPGDVLELS 153


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DPGDVIKAS 9
+PGDV++ S
Sbjct: 145 NPGDVLELS 153


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DPGDVIKAS 9
+PGDV++ S
Sbjct: 145 NPGDVLELS 153


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DPGDVIKAS 9
+PGDV++ S
Sbjct: 145 NPGDVLELS 153


>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DPGDVIKAS 9
+PGDV++ S
Sbjct: 145 NPGDVLELS 153


>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 2 PGDVIK 7
PGDV+K
Sbjct: 90 PGDVLK 95


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 2 PGDVIKA 8
PGDVI A
Sbjct: 117 PGDVITA 123


>sp|PUR7_PYRHO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DPGDVIKASK 10
D GD+I+A K
Sbjct: 216 DKGDLIEAYK 225


>sp|IF2B_PICTO|TRANSLATION initiation factor 2 subunit|Picrophilus torridus (strain ATCC

Query: 1 DPGDVIK 7
DP DVIK
Sbjct: 55 DPEDVIK 61




273|SequenceR|1370|1361|IINEPDPGDV

>sp|TRMY_METMA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanosarcina mazei

Query: 1 IINEPDPGDV 10
++ EPDPG +
Sbjct: 56 LLGEPDPGKI 65


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 INEPDPG 8
+N PDPG
Sbjct: 205 VNVPDPG 211


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 1 IINEPDPG 8
+INEP PG
Sbjct: 162 LINEPAPG 169


>sp|BSUHB_THEKO|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE kodakarensis (strain ATCC BAA-918

Query: 2 INEPDPG 8
+NEP+PG
Sbjct: 141 VNEPEPG 147


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 IINEPDPGDV 10
+INEP P ++
Sbjct: 70 LINEPKPEEI 79


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NEPDPGDV 10
+EP PGD+
Sbjct: 339 DEPGPGDL 346


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PDPGDV 10
P+PGDV
Sbjct: 517 PNPGDV 522


>sp|TRMY_METBU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcoides

Query: 1 IINEPDPGDV 10
++ EP+PG +
Sbjct: 56 LLGEPEPGKI 65


>sp|TRMY_METAC|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanosarcina

Query: 1 IINEPDPGDV 10
++ EP+PG +
Sbjct: 56 LLGEPEPGKI 65


>sp|RL18A_AERPE|LARGE ribosomal subunit protein eL20|Aeropyrum pernix (strain ATCC

Query: 2 INEPDPGDV 10
+ E DPG+V
Sbjct: 62 VEEVDPGEV 70


>sp|TRUD_PYRAB|PROBABLE tRNA pseudouridine synthase D|Pyrococcus abyssi (strain GE5 /

Query: 2 INEPDPGDV 10
+NE PGD+
Sbjct: 274 LNEAIPGDI 282


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 4 EPDPGDV 10
EPDP D+
Sbjct: 432 EPDPSDI 438


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 2 INEPDPGDV 10
+NE PGD+
Sbjct: 276 LNEALPGDI 284


>sp|RS3_METHJ|SMALL ribosomal subunit protein uS3|Methanospirillum hungatei JF-1

Query: 1 IINEPD 6
I+NEPD
Sbjct: 226 IVNEPD 231


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 INEPDPGDV 10
+++P+ GDV
Sbjct: 654 VSDPETGDV 662


>sp|Y783_METJA|UNCHARACTERIZED protein MJ0783|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IINEPDPGD 9
+IN P PGD
Sbjct: 10 LINFPYPGD 18


>sp|MRE11_METKA|DNA double-strand break repair protein|Methanopyrus kandleri (strain

Query: 3 NEPDPGDV 10
N PD GDV
Sbjct: 377 NPPDLGDV 384


>sp|SPT5_AERPE|TRANSCRIPTION elongation factor Spt5|Aeropyrum pernix (strain ATCC 700893

Query: 1 IINEPDPGDV 10
I+ DPGDV
Sbjct: 51 ILEAHDPGDV 60


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 5 PDPGDV 10
P PGDV
Sbjct: 17 PSPGDV 22


>sp|Y280_METAC|UNCHARACTERIZED solute-binding protein MA_0280|Methanosarcina acetivorans (strain

Query: 3 NEPDPGDV 10
N+P+PG+
Sbjct: 28 NQPEPGNT 35


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IINEPDP 7
IINE DP
Sbjct: 139 IINENDP 145




274|SequenceR|1375|1366|TKLILIINEP

>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LILIINEP 10
LILI N+P
Sbjct: 140 LILIANDP 147




275|SequenceR|1380|1371|FLISQTKLIL

>sp|MTNA_METST|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosphaera stadtmanae

Query: 1 FLISQTKL 8
FL+ QTKL
Sbjct: 13 FLLDQTKL 20




276|SequenceR|1385|1376|EKHRNFLISQ

>sp|THI4_ARCFU|THIAMINE thiazole synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KHRNFLIS 9
+HRNFL++
Sbjct: 98 EHRNFLVA 105


>sp|RL24E_METKA|LARGE ribosomal subunit protein eL24|Methanopyrus kandleri (strain AV19

Query: 1 EKHRNFLISQ 10
EKHR F+ Q
Sbjct: 55 EKHREFMAEQ 64


>sp|HTPX_METJA|PROTEASE HtpX homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KHRNFLIS 9
KHR+ LIS
Sbjct: 135 KHRDILIS 142


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EKHRNFLIS 9
+K++NFLIS
Sbjct: 30 DKNKNFLIS 38


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KHRNFLISQ 10
K +NFLIS
Sbjct: 421 KEKNFLISD 429


>sp|RIBL_PICTO|FAD synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 EKHRNFLISQ 10
E+ R F++SQ
Sbjct: 51 EEQRRFMVSQ 60




277|SequenceR|1390|1381|YPQLDEKHRN

>sp|GLPK_PYRFU|GLYCEROL kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PQLDEKHR 9
PQ+DEK R
Sbjct: 461 PQMDEKTR 468


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 PQLDEKHRN 10
P+LDEK R+
Sbjct: 511 PELDEKERD 519


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 YPQLDEK 7
YP+LDEK
Sbjct: 396 YPELDEK 402


>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 1 YPQLDEKHRN 10
Y QLDE++R+
Sbjct: 548 YEQLDEEYRS 557


>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YPQLDEKHR 9
+PQLDE R
Sbjct: 276 WPQLDELRR 284


>sp|KDGA_SACS2|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YPQLDEKH 8
YP++ EKH
Sbjct: 118 YPRMSEKH 125


>sp|KDGA_SACSO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 1 YPQLDEKH 8
YP++ EKH
Sbjct: 104 YPRMSEKH 111


>sp|IORB_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorB|Archaeoglobus fulgidus (strain ATCC

Query: 1 YPQLDE 6
YP+LDE
Sbjct: 110 YPELDE 115


>sp|RPO1C_THEON|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus onnurineus (strain NA1)

Query: 4 LDEKHR 9
LDEKHR
Sbjct: 120 LDEKHR 125


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 1 YPQLDE 6
YPQL+E
Sbjct: 96 YPQLEE 101


>sp|PIMT_METB6|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 YPQLDEKHR 9
YP+ DE+ R
Sbjct: 5 YPRSDERRR 13


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 YPQLDEKHR 9
+ QLD KH+
Sbjct: 16 HQQLDTKHK 24




278|SequenceR|1395|1386|YGAYKYPQLD

>sp|RL22_SACS2|LARGE ribosomal subunit protein uL22|Saccharolobus solfataricus (strain

Query: 2 GAYKYPQLD 10
++KYPQLD
Sbjct: 2 ASWKYPQLD 10


>sp|IORB_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorB|Archaeoglobus fulgidus (strain ATCC

Query: 2 GAYKYPQLD 10
G KYP+LD
Sbjct: 106 GTAKYPELD 114


>sp|IF6_HALWD|TRANSLATION initiation factor 6|Haloquadratum walsbyi (strain DSM 16790

Query: 1 YGAYKYPQL 9
YGAY +P L
Sbjct: 108 YGAYVHPDL 116


>sp|IF6_HALLT|TRANSLATION initiation factor 6|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 YGAYKYPQL 9
YGAY +P L
Sbjct: 108 YGAYVHPDL 116


>sp|IF6_SULTO|TRANSLATION initiation factor 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YGAYKYPQL 9
YGA YP+L
Sbjct: 111 YGALIYPEL 119


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AYKYPQLD 10
AYK+P+ D
Sbjct: 280 AYKFPEYD 287


>sp|METK_METMP|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GAYKYPQL 9
G Y YP+L
Sbjct: 68 GGYAYPEL 75


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 GAYKYPQL 9
G Y YP+L
Sbjct: 68 GGYAYPEL 75


>sp|METK_METM5|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 GAYKYPQL 9
G Y YP+L
Sbjct: 68 GGYAYPEL 75


>sp|METK_METVS|S-ADENOSYLMETHIONINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GAYKYPQL 9
G Y YP+L
Sbjct: 68 GGYAYPKL 75


>sp|TATAO_HALVD|SEC-INDEPENDENT protein translocase protein TatAo|Haloferax volcanii (strain ATCC

Query: 1 YGAYKYPQL 9
+GA K PQL
Sbjct: 28 FGANKLPQL 36


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 AYKYPQLD 10
+Y++P+LD
Sbjct: 369 SYRHPKLD 376


>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 1 YGAYKYPQLD 10
+GA+ YP+ D
Sbjct: 92 FGAHAYPEQD 101


>sp|METK_META3|S-ADENOSYLMETHIONINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GAYKYPQL 9
G Y YP L
Sbjct: 68 GGYAYPSL 75


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 YKYPQLD 10
Y++P+LD
Sbjct: 357 YRHPELD 363


>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 GAYKYPQ 8
G Y+YP+
Sbjct: 272 GVYRYPE 278


>sp|TRM1_THEAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma acidophilum

Query: 1 YGAYKYPQLD 10
+GAY+Y +D
Sbjct: 109 HGAYEYVDVD 118


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 GAYKYPQ 8
G Y+YP+
Sbjct: 273 GVYRYPE 279


>sp|LYSY_NATPD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 GAYKYPQ 8
G Y+YP+
Sbjct: 273 GVYRYPE 279


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 2 GAYKYPQLD 10
GAY P++D
Sbjct: 532 GAYADPEMD 540


>sp|Y388_METJA|UNCHARACTERIZED protein MJ0388|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GAYKYP 7
G YKYP
Sbjct: 74 GLYKYP 79


>sp|CPGS_METS3|CYCLIC 2,3-diphosphoglycerate synthetase|Methanobrevibacter smithii

Query: 4 YKYPQL 9
YKYP L
Sbjct: 435 YKYPDL 440


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KYPQLD 10
KYP+LD
Sbjct: 120 KYPKLD 125


>sp|LYSY_THEKO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 YGAYKYPQL 9
YG +K P+L
Sbjct: 107 YGEHKRPEL 115




279|SequenceR|1400|1391|RILMPYGAYK

>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 MPYGAY 9
MPYGAY
Sbjct: 940 MPYGAY 945


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 1 RILMPY 6
R+LMPY
Sbjct: 67 RVLMPY 72


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain

Query: 1 RILMPY 6
R+LMPY
Sbjct: 67 RVLMPY 72


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 1 RILMPY 6
R+LMPY
Sbjct: 70 RVLMPY 75


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain DSM

Query: 1 RILMPYGAY 9
R++MP G Y
Sbjct: 310 RVVMPRGTY 318


>sp|FRHB_METVO|COENZYME F420 hydrogenase subunit beta|Methanococcus voltae

Query: 4 MPYGAYK 10
MP+G YK
Sbjct: 1 MPFGNYK 7


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 ILMPYGA 8
+L+PYGA
Sbjct: 240 LLLPYGA 246


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 LMPYGAYK 10
LM YG YK
Sbjct: 312 LMAYGKYK 319


>sp|CAS2B_METHJ|CRISPR-ASSOCIATED endoribonuclease Cas2 2|Methanospirillum hungatei JF-1 (strain

Query: 1 RILMPYGAYK 10
R+L YGA+K
Sbjct: 21 RLLERYGAWK 30


>sp|TPIS_THEAC|TRIOSEPHOSPHATE isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 PYGAY 9
PYGAY
Sbjct: 64 PYGAY 68


>sp|PURP_CALMQ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Caldivirga maquilingensis (strain

Query: 2 ILMPYGAY 9
IL+P+G+Y
Sbjct: 81 ILIPHGSY 88


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LMPYGAYK 10
LM YG YK
Sbjct: 311 LMAYGKYK 318


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 LMPYGAYK 10
LM YG YK
Sbjct: 311 LMAYGKYK 318


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LMPYGAYK 10
LM YG YK
Sbjct: 311 LMAYGKYK 318


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RILMPYGAY 9
++++PYG +
Sbjct: 360 KVILPYGNF 368


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 ILMPYGAYK 10
+L+PYG K
Sbjct: 104 LLLPYGGGK 112


>sp|PANB_PYRAB|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 MPYGAYK 10
MP+G+Y+
Sbjct: 84 MPFGSYE 90


>sp|PANB_IGNH4|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 MPYGAYK 10
MP+G+Y+
Sbjct: 85 MPFGSYE 91


>sp|PANB_PYRHO|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 4 MPYGAYK 10
MP+G+Y+
Sbjct: 84 MPFGSYE 90


>sp|MTM3_METJA|TYPE II methyltransferase M.MjaIII|Methanocaldococcus jannaschii (strain

Query: 4 MPYGAYK 10
+PYG YK
Sbjct: 150 VPYGRYK 156


>sp|PANB_PYRFU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 MPYGAYK 10
MP+G+Y+
Sbjct: 84 MPFGSYE 90


>sp|FLAB2_AERPE|PROBABLE flagellin 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 RILMPYGAYK 10
R+L+P G Y+
Sbjct: 106 RLLLPNGFYE 115


>sp|PANB_THEKO|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 MPYGAYK 10
MP+G+Y+
Sbjct: 84 MPFGSYE 90


>sp|PANB_AERPE|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 MPYGAYK 10
MP+G+Y+
Sbjct: 86 MPFGSYE 92


>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ILMPYGAYK 10
+L+PYG K
Sbjct: 101 LLLPYGGGK 109


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RILMPYGAY 9
R + PYG Y
Sbjct: 98 RNIRPYGVY 106


>sp|KPRS_PYRFU|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RILMPYGAY 9
+I++PY AY
Sbjct: 78 KIVIPYMAY 86


>sp|PIMT_METJA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RILMPYGAY 9
++LMP G Y
Sbjct: 172 KLLMPVGRY 180




280|SequenceR|1405|1396|EMTITRILMP

>sp|RL21_NANEQ|LARGE ribosomal subunit protein eL21|Nanoarchaeum equitans (strain

Query: 1 EMTITRIL 8
++TITRIL
Sbjct: 26 KLTITRIL 33




281|SequenceR|1410|1401|LDDSTEMTIT

>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 1 LDDSTEMTIT 10
LD++TE+ IT
Sbjct: 297 LDENTEIEIT 306




282|SequenceR|1415|1406|EKSFLLDDST

>sp|PSA_METS5|PROTEASOME subunit alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 EKSFLLDD 8
EK FLLDD
Sbjct: 67 EKVFLLDD 74


>sp|PSA_SULTO|PROTEASOME subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKSFLLDD 8
EK F+LDD
Sbjct: 67 EKVFILDD 74


>sp|PSA_THEKO|PROTEASOME subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EKSFLLDD 8
EK FL+DD
Sbjct: 67 EKIFLIDD 74


>sp|PSA_THEK1|PROTEASOME subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 1 EKSFLLDD 8
EK FL+DD
Sbjct: 67 EKIFLIDD 74


>sp|PSA_SACS2|PROTEASOME subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EKSFLLDD 8
EK FL+DD
Sbjct: 67 EKVFLIDD 74


>sp|PSA_SACI7|PROTEASOME subunit alpha|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EKSFLLDD 8
EK FL+DD
Sbjct: 67 EKVFLIDD 74


>sp|PSA_SACI6|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EKSFLLDD 8
EK FL+DD
Sbjct: 67 EKVFLIDD 74


>sp|PSA_SACI4|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EKSFLLDD 8
EK FL+DD
Sbjct: 67 EKVFLIDD 74


>sp|PSA_SACI3|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.16.27)

Query: 1 EKSFLLDD 8
EK FL+DD
Sbjct: 67 EKVFLIDD 74


>sp|PSA_SACI2|PROTEASOME subunit alpha|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EKSFLLDD 8
EK FL+DD
Sbjct: 67 EKVFLIDD 74


>sp|PSA_SACI1|PROTEASOME subunit alpha|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EKSFLLDD 8
EK FL+DD
Sbjct: 67 EKVFLIDD 74


>sp|PSA_SULAC|PROTEASOME subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EKSFLLDD 8
EK F+LDD
Sbjct: 67 EKIFMLDD 74


>sp|TFE_METS5|TRANSCRIPTION factor E|Metallosphaera sedula (strain ATCC 51363

Query: 3 SFLLDDST 10
SFLLD+ T
Sbjct: 26 SFLLDNKT 33


>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 1 EKSFLLDD 8
+++FLLDD
Sbjct: 166 DEAFLLDD 173




283|SequenceR|1420|1411|PLLPSEKSFL

>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PLLPSEKSFL 10
P+LPSE +FL
Sbjct: 285 PVLPSEANFL 294


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 PLLPSEK 7
PLLP EK
Sbjct: 263 PLLPEEK 269


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PLLPSEK 7
PLLP+E+
Sbjct: 239 PLLPAER 245


>sp|DHYS1_ARCFU|PROBABLE deoxyhypusine synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LPSEKSFL 10
+P E+SFL
Sbjct: 157 IPDERSFL 164


>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 3 LPSEKSF 9
LPS KSF
Sbjct: 16 LPSSKSF 22




284|SequenceR|1425|1416|LETAAPLLPS

>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LETAAPLLPS 10
+ETAAP+L S
Sbjct: 862 METAAPILRS 871


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 LETAAPLLPS 10
LETA +LPS
Sbjct: 454 LETAGSVLPS 463


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LETAAPLLP 9
++ AAPLLP
Sbjct: 70 VDAAAPLLP 78


>sp|LADH_METMP|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LETAAPLLP 9
+ET P+LP
Sbjct: 366 IETFGPILP 374




285|SequenceR|1430|1421|VTHFALETAA

>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VTHFALET 8
VTH ALET
Sbjct: 208 VTHNALET 215


>sp|METE_PYRHO|METHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VTHFALETA 9
VT FALE A
Sbjct: 228 VTQFALEFA 236


>sp|METE_PYRFU|METHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VTHFALETA 9
VT FALE A
Sbjct: 228 VTQFALEFA 236


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VTHFALETA 9
VT FALE A
Sbjct: 228 VTQFALEFA 236


>sp|RL10E_METKA|LARGE ribosomal subunit protein uL16|Methanopyrus kandleri (strain AV19

Query: 1 VTHFALETA 9
VTH ALE A
Sbjct: 57 VTHNALEAA 65


>sp|RL10E_METTH|LARGE ribosomal subunit protein uL16|Methanothermobacter

Query: 1 VTHFALETA 9
+TH ALE A
Sbjct: 45 ITHNALEAA 53




286|SequenceR|1435|1426|LASCNVTHFA

>sp|HMD_METTL|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermococcus thermolithotrophicus

Query: 2 ASCNVTHFA 10
A+C +T+FA
Sbjct: 15 AACGITNFA 23


>sp|YAC1_METSH|UNCHARACTERIZED 16.9 kDa protein in|Methanothrix soehngenii (Methanosaeta concilii)

Query: 4 CNVTH 8
CNVTH
Sbjct: 121 CNVTH 125




287|SequenceR|1440|1431|LEEANLASCN

>sp|TRKA_METTH|TRK system potassium uptake protein|Methanothermobacter

Query: 2 EEANLASC 9
+EANL SC
Sbjct: 76 DEANLLSC 83


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEEANLASCN 10
LEE L+ CN
Sbjct: 835 LEETILSQCN 844


>sp|HEM1_METST|GLUTAMYL-TRNA reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LEEANLASCN 10
LEE L +CN
Sbjct: 38 LEEVTLKTCN 47




288|SequenceR|1445|1436|GNERRLEEAN

>sp|DAPAL_THEKO|UNCHARACTERIZED DapA-like lyase TK1237|Thermococcus kodakarensis (strain ATCC

Query: 2 NERRLEEA 9
NE+R EEA
Sbjct: 223 NEKRFEEA 230


>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 1 GNERRLEEAN 10
G ERR+EE++
Sbjct: 170 GTERRVEESS 179


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 3 ERRLEEA 9
ERRLEEA
Sbjct: 661 ERRLEEA 667


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 NERRLEEAN 10
NER +EE N
Sbjct: 341 NERFIEEIN 349


>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 2 NERRLEE 8
NERRL+E
Sbjct: 330 NERRLKE 336


>sp|TYSY_METBF|PUTATIVE thymidylate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 NERRLEE 8
NE RLEE
Sbjct: 67 NEERLEE 73


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 2 NERRLEE 8
N+RR+EE
Sbjct: 340 NQRRIEE 346




289|SequenceR|1450|1441|QLVELGNERR

>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LVELGNERR 10
+V+LG+ERR
Sbjct: 592 IVDLGSERR 600


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LVELGNERR 10
+V+LGNE+R
Sbjct: 590 IVDLGNEQR 598


>sp|T1SX_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 QLVELGNER 9
++VELGNE+
Sbjct: 239 EVVELGNEK 247


>sp|URE2_HALMA|UREASE subunit beta|Haloarcula marismortui (strain ATCC 43049

Query: 1 QLVELGNERR 10
+LVE+G +RR
Sbjct: 84 ELVEIGGKRR 93


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LVELGNERR 10
+V+LG+E+R
Sbjct: 577 MVDLGDEKR 585


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LVELGNERR 10
+V+LG+E+R
Sbjct: 593 VVDLGSEKR 601


>sp|DNAG_META3|DNA primase DnaG|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QLVELGNER 9
+++E+GNE+
Sbjct: 152 EIIEMGNEK 160


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 QLVELGNE 8
QLVE+G E
Sbjct: 57 QLVEMGEE 64




290|SequenceR|1455|1446|RSFAEQLVEL

>sp|DNAG_METJA|DNA primase DnaG|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RSFAEQLVEL 10
R F E+L+EL
Sbjct: 336 RKFYEKLIEL 345


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 RSFAEQLVEL 10
RSF ++L+E+
Sbjct: 592 RSFKKELIEI 601




291|SequenceR|1460|1451|LVAVCRSFAE

>sp|ARGJ_METTH|GLUTAMATE N-acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 LVAVCRSFA 9
LVAVCR A
Sbjct: 251 LVAVCRELA 259


>sp|Y1183_METJA|UNCHARACTERIZED protein MJ1183|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VAVCRSFAE 10
V VC+ FAE
Sbjct: 41 VGVCQPFAE 49


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 VCRSFAE 10
VC+S+AE
Sbjct: 276 VCKSYAE 282


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 CRSFAE 10
C+SFAE
Sbjct: 122 CKSFAE 127


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 4 VCRSFAE 10
+C SFAE
Sbjct: 244 ICTSFAE 250


>sp|FLUC1_HALMA|FLUORIDE-SPECIFIC ion channel FluC 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 LVAVCRSFA 9
LV VC SFA
Sbjct: 42 LVNVCGSFA 50


>sp|DMSR_HALVD|DIMETHYL sulfoxide reductase transcriptional activator|Haloferax volcanii

Query: 4 VCRSFAE 10
+CR+FAE
Sbjct: 82 LCRAFAE 88




292|SequenceR|1465|1456|KSARTLVAVC

>sp|RIB7_ARCFU|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SARTLVAV 9
ARTLVAV
Sbjct: 101 EARTLVAV 108




293|SequenceR|1470|1461|SMDSPKSART

>sp|RS24_HALWD|SMALL ribosomal subunit protein eS24|Haloquadratum walsbyi (strain DSM

Query: 3 DSPKSAR 9
DSP+SAR
Sbjct: 72 DSPQSAR 78


>sp|AGOG_THEKO|N-GLYCOSYLASE/DNA lyase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SMDSPKSART 10
++ SPK+A+T
Sbjct: 156 ALGSPKTAKT 165




294|SequenceR|1475|1466|GCVQVSMDSP

>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 VQVSMDSP 10
VQ++MD P
Sbjct: 240 VQITMDRP 247




295|SequenceR|1480|1471|CKSIYGCVQV

>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KSIYGCVQ 9
K IYGC++
Sbjct: 482 KKIYGCIE 489


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CKSIYG 6
CK+IYG
Sbjct: 302 CKAIYG 307


>sp|COMDE_METAC|SULFOPYRUVATE decarboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CKSIYGC 7
CK +Y C
Sbjct: 226 CKELYAC 232


>sp|PDXS_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum aerophilum (strain

Query: 2 KSIYGCVQ 9
KSIYG ++
Sbjct: 205 KSIYGAIK 212


>sp|PYLD_METBF|PYRROLYSINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CKSIYG 6
CK++YG
Sbjct: 39 CKALYG 44


>sp|Y177_METMA|MACRO domain-containing protein MM_0177|Methanosarcina mazei (strain

Query: 1 CKSIYGC 7
CK++ GC
Sbjct: 66 CKTLNGC 72




296|SequenceR|1485|1476|AAVSYCKSIY

>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AAVSYCKSIY 10
+A+SYC++++
Sbjct: 34 SALSYCRNVF 43


>sp|PHEA_METJA|PREPHENATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VSYCKSIY 10
+ YC SIY
Sbjct: 32 IDYCNSIY 39


>sp|CAPPA_ARCFU|PHOSPHOENOLPYRUVATE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AVSYCKSIY 10
A+++C S+Y
Sbjct: 364 AITFCASLY 372


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 3 VSYCKSI 9
V+YC+SI
Sbjct: 639 VNYCRSI 645


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AAVSYCKSI 9
A +SY KSI
Sbjct: 383 AGISYTKSI 391


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 1 AAVSYCKSIY 10
AA+ C +IY
Sbjct: 280 AAIRMCNAIY 289




297|SequenceR|1490|1481|CEEFQAAVSY

>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 1 CEEFQAAVS 9
CEE QAA++
Sbjct: 570 CEEIQAAIT 578


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 CEEFQAAVSY 10
C+E+ AV Y
Sbjct: 644 CDEYIEAVKY 653




298|SequenceR|1495|1486|TIKERCEEFQ

>sp|RPO11_METTH|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanothermobacter

Query: 1 TIKERCEEFQ 10
T+++RC+EF+
Sbjct: 70 TLRDRCDEFR 79


>sp|Y1272_IGNH4|UPF0179 protein Igni_1272|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IKERCEEFQ 10
+KERCEE++
Sbjct: 31 LKERCEEYK 39


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 2 IKERCEEFQ 10
IKER EFQ
Sbjct: 96 IKERLREFQ 104


>sp|Y1255_METJA|UNCHARACTERIZED glycosyltransferase MJ1255|Methanocaldococcus jannaschii (strain

Query: 2 IKERCEEF 9
I ERCE F
Sbjct: 146 INERCERF 153


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IKERCEEFQ 10
+KE CE F+
Sbjct: 308 VKEVCEAFE 316


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IKERCEEFQ 10
+KE CE F+
Sbjct: 308 VKEVCEAFE 316


>sp|NPD_SULTO|NAD-DEPENDENT protein deacetylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IKERCEEF 9
++ER EEF
Sbjct: 226 VRERVEEF 233


>sp|TRPA_HALVD|TRYPTOPHAN synthase alpha chain|Haloferax volcanii (strain ATCC 29605

Query: 2 IKERCEEF 9
++E C+EF
Sbjct: 134 LREACDEF 141


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 1 TIKERCEE 8
T+K +CE+
Sbjct: 6 TVKSQCED 13


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 2 IKERCEEF 9
+K+RCEE
Sbjct: 219 LKKRCEEL 226




299|SequenceR|1500|1491|ISPMETIKER

>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 1 ISPMETIKER 10
ISP ++KER
Sbjct: 22 ISPPSSVKER 31


>sp|GLKA_THEKO|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus kodakarensis (strain ATCC

Query: 3 PMETIKE 9
P ETIKE
Sbjct: 244 PFETIKE 250


>sp|PMDHS_METAR|PHOSPHOMEVALONATE dehydratase small subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 SPMETIKE 9
+P+ETIK+
Sbjct: 109 NPVETIKD 116


>sp|SUCD_METJA|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanocaldococcus jannaschii

Query: 1 ISPMETIKE 9
I PME +KE
Sbjct: 142 IIPMEVLKE 150




300|SequenceR|1505|1496|CLDKIISPME

>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LDKIISPME 10
LDK+ISP+E
Sbjct: 314 LDKLISPLE 322


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LDKIISPME 10
LDK+ISP+E
Sbjct: 314 LDKLISPLE 322


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LDKIISPME 10
LDK+ISP+E
Sbjct: 314 LDKLISPLE 322


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LDKIISPME 10
LDK+ISP+E
Sbjct: 314 LDKLISPLE 322


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LDKIISPME 10
LD++ISP+E
Sbjct: 314 LDRLISPLE 322


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDKIISPME 10
LDK+ISP E
Sbjct: 312 LDKLISPYE 320


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 DKIISPME 10
DKII P+E
Sbjct: 723 DKIIEPLE 730


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 DKIISPME 10
DKII P+E
Sbjct: 723 DKIIEPLE 730


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 DKIISPME 10
DKII P+E
Sbjct: 723 DKIIEPLE 730


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 DKIISPME 10
DKII P+E
Sbjct: 723 DKIIEPLE 730


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 3 DKIISPME 10
DKII P+E
Sbjct: 723 DKIIEPLE 730


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 LDKIISPME 10
LD++I+P+E
Sbjct: 325 LDRMITPIE 333


>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 2 LDKIISPME 10
L KII PME
Sbjct: 219 LRKIIKPME 227


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 2 LDKIISPME 10
+DKI+S ME
Sbjct: 714 IDKIVSLME 722


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 2 LDKIISPME 10
+DK I PME
Sbjct: 123 IDKSIVPME 131


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LDKIISPME 10
L+K+I+P+E
Sbjct: 325 LEKMIAPVE 333


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LDKIISPM 9
+D+II+PM
Sbjct: 278 VDRIINPM 285


>sp|KAD6_SACS2|PUTATIVE adenylate kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LDKIISPME 10
LDKIIS E
Sbjct: 176 LDKIISSYE 184


>sp|KAD6_SACI7|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LDKIISPME 10
LDKIIS E
Sbjct: 176 LDKIISSYE 184


>sp|KAD6_SACI6|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LDKIISPME 10
LDKIIS E
Sbjct: 176 LDKIISSYE 184


>sp|KAD6_SACI4|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LDKIISPME 10
LDKIIS E
Sbjct: 176 LDKIISSYE 184


>sp|KAD6_SACI1|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LDKIISPME 10
LDKIIS E
Sbjct: 176 LDKIISSYE 184


>sp|KAD6_SACI3|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.16.27)

Query: 2 LDKIISPME 10
LDKIIS E
Sbjct: 176 LDKIISSYE 184


>sp|KAD6_SACI2|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LDKIISPME 10
LDKIIS E
Sbjct: 176 LDKIISSYE 184


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DKIISPME 10
DKII P E
Sbjct: 376 DKIIEPFE 383


>sp|Y089_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 CLDKIISP 8
C++KI+ P
Sbjct: 50 CINKILKP 57




301|SequenceR|1510|1501|FYLVRCLDKI

>sp|CBID_METMA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LVRCLDKI 10
L+RC DK+
Sbjct: 221 LIRCTDKV 228


>sp|CBID_METBF|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LVRCLDKI 10
L+RC DK+
Sbjct: 221 LIRCTDKV 228


>sp|CBID_METAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 LVRCLDKI 10
L+RC DK+
Sbjct: 221 LIRCTDKV 228


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 LVRCLDKI 10
LVRCL+++
Sbjct: 54 LVRCLNRL 61


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FYLVRCLDKI 10
+Y+ RC D I
Sbjct: 50 YYVTRCGDDI 59


>sp|PUR5_METVS|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FYLVRCLDKI 10
+YLV C D +
Sbjct: 51 YYLVLCTDGV 60


>sp|PUR5_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FYLVRCLDKI 10
+YLV C D +
Sbjct: 51 YYLVLCTDGV 60


>sp|PUR5_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C7 /

Query: 1 FYLVRCLDKI 10
+YLV C D +
Sbjct: 51 YYLVLCTDGV 60


>sp|PUR5_METM6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C6 /

Query: 1 FYLVRCLDKI 10
+YLV C D +
Sbjct: 51 YYLVLCTDGV 60


>sp|PUR5_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C5 /

Query: 1 FYLVRCLDKI 10
+YLV C D +
Sbjct: 51 YYLVLCTDGV 60


>sp|TRKA2_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 1 FYLVRCLDK 9
FYL + +DK
Sbjct: 243 FYLAKIIDK 251


>sp|Y3508_METJA|PROBABLE helicase MJECL08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LVRCLDKI 10
LV C DKI
Sbjct: 275 LVECADKI 282


>sp|Y981_METJA|UNCHARACTERIZED protein MJ0981|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FYLVRC 6
+YLVRC
Sbjct: 32 YYLVRC 37


>sp|Y1162_METJA|UNCHARACTERIZED protein MJ1162|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 RCLDKI 10
RC+DKI
Sbjct: 182 RCIDKI 187




302|SequenceR|1515|1506|PISKGFYLVR

>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 ISKGFYLVR 10
+ +GFY+VR
Sbjct: 513 VEEGFYVVR 521


>sp|PYRI_PYRIL|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum islandicum

Query: 1 PISKGFYLVR 10
P+ FYLVR
Sbjct: 121 PVEPTFYLVR 130


>sp|PYRI_PYRAE|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum aerophilum

Query: 1 PISKGFYLVR 10
P+ FYLVR
Sbjct: 121 PVEPTFYLVR 130


>sp|PYRI_PYRAR|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum arsenaticum

Query: 1 PISKGFYLVR 10
P+ FYLVR
Sbjct: 121 PVEPTFYLVR 130


>sp|MRE11_METJA|DNA double-strand break repair protein|Methanocaldococcus jannaschii

Query: 4 KGFYLV 9
KGFYLV
Sbjct: 222 KGFYLV 227


>sp|MRE11_PYRFU|DNA double-strand break repair protein|Pyrococcus furiosus (strain ATCC

Query: 2 ISKGFYLVR 10
++KGFY+V
Sbjct: 251 VNKGFYIVE 259


>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 2 ISKGFYLV 9
+ KGFY+V
Sbjct: 253 VDKGFYIV 260


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PISKGFYLV 9
P+S GF+L+
Sbjct: 78 PLSYGFWLI 86


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 ISKGFYL 8
ISKG YL
Sbjct: 358 ISKGIYL 364


>sp|NADM_METMJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ISKGFYLVR 10
+S+GFY+ R
Sbjct: 1 MSRGFYIGR 9




303|SequenceR|1520|1511|LAAVRPISKG

>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VRPISKG 10
+RPI+KG
Sbjct: 249 IRPITKG 255


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans

Query: 1 LAAVRPISKG 10
+A RP++KG
Sbjct: 88 IAECRPLNKG 97


>sp|RL10_AERPE|LARGE ribosomal subunit protein uL10|Aeropyrum pernix (strain ATCC 700893

Query: 3 AVRPISKG 10
+RPI KG
Sbjct: 187 GIRPIEKG 194


>sp|RL18_SACI1|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 LAAVRPISKG 10
LAA+R + KG
Sbjct: 89 LAALRAVKKG 98


>sp|RS17_THEKO|SMALL ribosomal subunit protein uS17|Thermococcus kodakarensis (strain

Query: 1 LAAVRPISK 9
+A RPISK
Sbjct: 87 IAETRPISK 95


>sp|RL18_SACI7|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 LAAVRPISKG 10
LAA+R + KG
Sbjct: 89 LAALRAVKKG 98


>sp|RL18_SACI6|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 LAAVRPISKG 10
LAA+R + KG
Sbjct: 89 LAALRAVKKG 98


>sp|RL18_SACI4|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 LAAVRPISKG 10
LAA+R + KG
Sbjct: 89 LAALRAVKKG 98


>sp|RL18_SACI3|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 LAAVRPISKG 10
LAA+R + KG
Sbjct: 89 LAALRAVKKG 98


>sp|RL18_SACI2|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 LAAVRPISKG 10
LAA+R + KG
Sbjct: 89 LAALRAVKKG 98


>sp|COBS_THEKO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LAAVRPISKG 10
LA RP+ KG
Sbjct: 136 LATKRPLGKG 145




304|SequenceR|1525|1516|VCEVGLAAVR

>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 VCEVGLAAVR 10
+CE+GLA R
Sbjct: 189 ICELGLARSR 198


>sp|MOAA_ARCFU|PROBABLE GTP 3',8-cyclase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CEVGLAAVR 10
CEVGL V+
Sbjct: 142 CEVGLTPVK 150


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 VCEVGLAAVR 10
+ + GLAAVR
Sbjct: 582 IAQAGLAAVR 591




305|SequenceR|1530|1521|VAFSSVCEVG

>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 AFSSVCEVG 10
AF++VC+VG
Sbjct: 477 AFATVCKVG 485


>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 FSSVCEVG 10
F+S+C+VG
Sbjct: 469 FTSICKVG 476


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 FSSVCEVG 10
F SVC+VG
Sbjct: 483 FESVCKVG 490


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 FSSVCEVG 10
F SVC+VG
Sbjct: 487 FKSVCKVG 494


>sp|GUAAA_META3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus aeolicus

Query: 1 VAFSSVCEV 9
+A+S++CEV
Sbjct: 139 LAYSNICEV 147


>sp|KAE1_AERPE|TRNA N6-adenosine threonylcarbamoyltransferase|Aeropyrum pernix (strain

Query: 1 VAFSSVCEV 9
VAFSSV EV
Sbjct: 241 VAFSSVVEV 249


>sp|GCH1_SULAC|GTP cyclohydrolase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VAFSSVCE 8
++FSS+CE
Sbjct: 83 ISFSSLCE 90


>sp|GCH1_SULTO|GTP cyclohydrolase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VAFSSVCE 8
+ FSS+CE
Sbjct: 82 IGFSSLCE 89


>sp|GCH1_SACS2|GTP cyclohydrolase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VAFSSVCE 8
V FSS+CE
Sbjct: 83 VNFSSLCE 90


>sp|GCH1_SACI7|GTP cyclohydrolase 1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VAFSSVCE 8
V FSS+CE
Sbjct: 83 VNFSSLCE 90


>sp|GCH1_SACI6|GTP cyclohydrolase 1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VAFSSVCE 8
V FSS+CE
Sbjct: 83 VNFSSLCE 90


>sp|GCH1_SACI4|GTP cyclohydrolase 1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VAFSSVCE 8
V FSS+CE
Sbjct: 83 VNFSSLCE 90


>sp|GCH1_SACI3|GTP cyclohydrolase 1|Saccharolobus islandicus (strain M.16.27)

Query: 1 VAFSSVCE 8
V FSS+CE
Sbjct: 83 VNFSSLCE 90


>sp|GCH1_SACI2|GTP cyclohydrolase 1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VAFSSVCE 8
V FSS+CE
Sbjct: 83 VNFSSLCE 90


>sp|GCH1_SACI1|GTP cyclohydrolase 1|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VAFSSVCE 8
V FSS+CE
Sbjct: 83 VNFSSLCE 90


>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 FSSVCEVG 10
F S+C+VG
Sbjct: 469 FPSICKVG 476


>sp|GUAAA_METTH|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothermobacter

Query: 1 VAFSSVCEV 9
+A SS+CEV
Sbjct: 140 LATSSICEV 148


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 3 FSSVCEVG 10
F +VC+VG
Sbjct: 484 FETVCKVG 491


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 3 FSSVCEVG 10
F +VC+VG
Sbjct: 484 FKTVCKVG 491


>sp|ARGC_METKA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanopyrus kandleri (strain AV19 /

Query: 3 FSSVCEVG 10
F VCEVG
Sbjct: 270 FIRVCEVG 277




306|SequenceR|1535|1526|QLWFDVAFSS

>sp|FSX1_UNCAX|FUSEXIN 1|Uncultured archaeon

Query: 4 FDVAFSS 10
FDVAFSS
Sbjct: 414 FDVAFSS 420


>sp|CDC6_METMJ|ORC1-TYPE DNA replication protein|Methanoculleus marisnigri (strain ATCC

Query: 1 QLWFDVAFS 9
++WFD A S
Sbjct: 389 EMWFDAATS 397


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 QLWFDV 6
+LWFDV
Sbjct: 223 ELWFDV 228


>sp|GCS2_HALMA|GLUTAMATE--CYSTEINE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QLWFDV 6
+LWFDV
Sbjct: 224 ELWFDV 229


>sp|GPMA_METVS|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC

Query: 4 FDVAFSS 10
FDVA+SS
Sbjct: 48 FDVAYSS 54


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 QLWFDVAFSS 10
+LW+DV S+
Sbjct: 674 RLWYDVVQSA 683


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 QLWFDVAF 8
Q+W VAF
Sbjct: 5 QVWVSVAF 12


>sp|GCS2_HALSA|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QLWFDV 6
+LW+DV
Sbjct: 223 ELWYDV 228


>sp|GCS2_HALS3|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 QLWFDV 6
+LW+DV
Sbjct: 223 ELWYDV 228


>sp|Y2291_ARCFU|UNCHARACTERIZED protein AF_2291|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WFDVAFS 9
WFD AFS
Sbjct: 175 WFDEAFS 181


>sp|GCS2_HALWD|GLUTAMATE--CYSTEINE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QLWFDV 6
+LW+DV
Sbjct: 225 ELWYDV 230


>sp|GCS2_NATPD|GLUTAMATE--CYSTEINE ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QLWFDV 6
+LW+DV
Sbjct: 223 ELWYDV 228


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 QLWFDV 6
+LW+DV
Sbjct: 223 ELWYDV 228




307|SequenceR|1540|1531|QFLHTQLWFD

>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QFLHTQLWFD 10
QF++ LW+D
Sbjct: 302 QFVYNGLWYD 311


>sp|CARA_SULAC|CARBAMOYL phosphate synthase small chain|Sulfolobus acidocaldarius (strain

Query: 3 LHTQLWF 9
+HT++WF
Sbjct: 316 IHTRVWF 322


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 4 HTQLWFD 10
HT LW D
Sbjct: 462 HTYLWHD 468


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QFLHTQLWFD 10
+FL T+L FD
Sbjct: 77 RFLDTELTFD 86




308|SequenceR|1545|1536|WLIGAQFLHT

>sp|GGGPS_METTM|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 1 WLIGAQFL 8
W+IGAQ L
Sbjct: 103 WIIGAQAL 110


>sp|GGGPS_METTH|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 WLIGAQFL 8
W+IGAQ L
Sbjct: 103 WIIGAQAL 110


>sp|RS2_METTH|SMALL ribosomal subunit protein uS2|Methanothermobacter

Query: 1 WLIGAQFL 8
WL+ QFL
Sbjct: 168 WLLARQFL 175


>sp|GGGPS_HYPBU|GERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 WLIGAQ 6
W++GAQ
Sbjct: 106 WIVGAQ 111


>sp|Y2183_ARCFU|UNCHARACTERIZED protein AF_2183|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IGAQFLH 9
+GA+FLH
Sbjct: 72 LGAKFLH 78


>sp|Y2347_METMJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanoculleus

Query: 2 LIGAQFLHT 10
LIG + LHT
Sbjct: 283 LIGEEHLHT 291


>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WLIGAQF 7
W +G QF
Sbjct: 500 WFLGCQF 506


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 WLIGAQF 7
W +G QF
Sbjct: 498 WFLGCQF 504


>sp|Y794_METJA|UNCHARACTERIZED protein MJ0794|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WLIGAQFLH 9
WLI A F+H
Sbjct: 83 WLIIAGFMH 91


>sp|Y355_METJA|UNCHARACTERIZED protein MJ0355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WLIGAQFL 8
W++G +FL
Sbjct: 45 WIMGFEFL 52


>sp|SYFA_METVS|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 WLIGAQFLH 9
WL G FL+
Sbjct: 42 WLTGRDFLN 50


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LIGAQFLH 9
L+G Q++H
Sbjct: 282 LVGLQYIH 289




309|SequenceR|1550|1541|FGLLYWLIGA

>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FGLLYWLIG 9
FGL W+IG
Sbjct: 473 FGLTRWIIG 481


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FGLLYWLIG 9
FGL W+IG
Sbjct: 479 FGLSRWVIG 487


>sp|GGGPS_METTH|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 5 YWLIGA 10
YW+IGA
Sbjct: 102 YWIIGA 107


>sp|GGGPS_METTM|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 5 YWLIGA 10
YW+IGA
Sbjct: 102 YWIIGA 107


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FGLLYWLIG 9
+GL WLIG
Sbjct: 473 YGLSRWLIG 481


>sp|RS2_IGNH4|SMALL ribosomal subunit protein uS2|Ignicoccus hospitalis (strain KIN4/I

Query: 1 FGLLYWLI 8
LLYWL+
Sbjct: 172 LALLYWLL 179


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 FGLLYWLIG 9
+GL W+IG
Sbjct: 473 YGLTRWVIG 481


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 FGLLYWLIG 9
+GL W+IG
Sbjct: 473 YGLTRWVIG 481


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 FGLLYWLIG 9
+GL W+IG
Sbjct: 473 YGLTRWVIG 481


>sp|GGGPS_HYPBU|GERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 5 YWLIGA 10
YW++GA
Sbjct: 105 YWIVGA 110


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 4 LYWLIG 9
YWL+G
Sbjct: 136 FYWLVG 141


>sp|RS2_STAMF|SMALL ribosomal subunit protein uS2|Staphylothermus marinus (strain ATCC

Query: 1 FGLLYWLIG 9
L+YWL+
Sbjct: 183 LALIYWLLA 191


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 GLLYW 6
GL+YW
Sbjct: 542 GLMYW 546


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FGLLYWLIG 9
FG+L W +G
Sbjct: 333 FGVLGWDVG 341


>sp|RS2_METTP|SMALL ribosomal subunit protein uS2|Methanothrix thermoacetophila (strain

Query: 3 LLYWLIG 9
L+YWL+
Sbjct: 176 LIYWLLA 182


>sp|MRAY_METTH|PUTATIVE phospho-N-acetylmuramoyl-pentapeptide-

Query: 3 LLYWLI 8
LLYWLI
Sbjct: 330 LLYWLI 335


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YWLIGA 10
YWL+G
Sbjct: 520 YWLVGG 525


>sp|BTUCA_HALSA|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 4 LYWLIG 9
+YWL+G
Sbjct: 217 MYWLMG 222


>sp|BTUCA_HALS3|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 4 LYWLIG 9
+YWL+G
Sbjct: 217 MYWLMG 222




310|SequenceR|1555|1546|DYNFLFGLLY

>sp|AMZA_NANEQ|ARCHAEMETZINCIN equitans (strain Kin4-M)

Query: 1 DYNFLFGLLY 10
+YNF+FGL Y
Sbjct: 77 NYNFVFGLAY 86


>sp|AMZA_AERPE|ARCHAEMETZINCIN pernix (strain ATCC 700893

Query: 2 YNFLFGL 8
+NF+FGL
Sbjct: 93 FNFVFGL 99


>sp|AMZA_SACS2|ARCHAEMETZINCIN solfataricus (strain ATCC 35092

Query: 2 YNFLFGL 8
YNF+FGL
Sbjct: 88 YNFVFGL 94


>sp|AMZA_SACI7|ARCHAEMETZINCIN islandicus (strain Y.G.57.14 /

Query: 2 YNFLFGL 8
YNF+FGL
Sbjct: 88 YNFVFGL 94


>sp|AMZA_SACI6|ARCHAEMETZINCIN islandicus (strain M.16.4 /

Query: 2 YNFLFGL 8
YNF+FGL
Sbjct: 88 YNFVFGL 94


>sp|AMZA_SACI4|ARCHAEMETZINCIN islandicus (strain M.14.25 /

Query: 2 YNFLFGL 8
YNF+FGL
Sbjct: 88 YNFVFGL 94


>sp|AMZA_SACI3|ARCHAEMETZINCIN islandicus (strain M.16.27) (Sulfolobus

Query: 2 YNFLFGL 8
YNF+FGL
Sbjct: 88 YNFVFGL 94


>sp|AMZA_SACI2|ARCHAEMETZINCIN islandicus (strain L.S.2.15 /

Query: 2 YNFLFGL 8
YNF+FGL
Sbjct: 88 YNFVFGL 94


>sp|AMZA_SACI1|ARCHAEMETZINCIN islandicus (strain Y.N.15.51 /

Query: 2 YNFLFGL 8
YNF+FGL
Sbjct: 88 YNFVFGL 94


>sp|FLAB4_PYRAB|FLAGELLIN B4|Pyrococcus abyssi (strain GE5 /

Query: 2 YNFLFGLLY 10
YN+ GLLY
Sbjct: 108 YNYSKGLLY 116


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 4 FLFGLLY 10
FLF LLY
Sbjct: 353 FLFDLLY 359


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 FLFGLLY 10
FLF LLY
Sbjct: 335 FLFDLLY 341


>sp|RNP2_METM7|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain C7 /

Query: 1 DYNFLFGLL 9
DYN +G+L
Sbjct: 57 DYNHPYGIL 65


>sp|RNP2_METM6|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain C6 /

Query: 1 DYNFLFGLL 9
DYN +G+L
Sbjct: 57 DYNHPYGIL 65


>sp|RNP2_METM5|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain C5 /

Query: 1 DYNFLFGLL 9
DYN +G+L
Sbjct: 57 DYNHPYGIL 65


>sp|AMZA_PYRHO|ARCHAEMETZINCIN horikoshii (strain ATCC 700860

Query: 2 YNFLFGLLY 10
+NF+FGL +
Sbjct: 92 FNFIFGLAH 100




311|SequenceR|1560|1551|EELTYDYNFL

>sp|GCS2_HALWD|GLUTAMATE--CYSTEINE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EELTYDYN 8
+EL YDYN
Sbjct: 35 QELIYDYN 42


>sp|NIFH_METMP|NITROGENASE iron protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 EELTYDYNFL 10
EELT Y FL
Sbjct: 265 EELTSKYGFL 274


>sp|NIFH_METMI|NITROGENASE iron protein|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 EELTYDYNFL 10
EELT Y FL
Sbjct: 265 EELTSKYGFL 274


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 EELTYDY 7
+E+TYDY
Sbjct: 224 DEITYDY 230


>sp|DLDH2_HALMA|DIHYDROLIPOYL dehydrogenase 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 EELTYDYNF 9
EEL D+NF
Sbjct: 231 EELGIDFNF 239


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 2 ELTYDYNFL 10
++ YDY+FL
Sbjct: 712 DIIYDYDFL 720


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ELTYDYNFL 10
EL YDY F
Sbjct: 394 ELEYDYEFF 402


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 1 EELTYDYNF 9
E LTY Y F
Sbjct: 176 EALTYPYTF 184


>sp|Y020_SULAC|UPF0284 protein Saci_0020|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EELTYDYNFL 10
EEL Y+FL
Sbjct: 139 EELANSYDFL 148


>sp|ARGJ_METTH|GLUTAMATE N-acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 ELTYDY 7
+LTYDY
Sbjct: 388 DLTYDY 393


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ELTYDY 7
+LTYDY
Sbjct: 381 DLTYDY 386


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ELTYDY 7
+LTYDY
Sbjct: 381 DLTYDY 386


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 2 ELTYDY 7
+LTYDY
Sbjct: 365 DLTYDY 370


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LTYDYNF 9
+ YDYNF
Sbjct: 34 VAYDYNF 40


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LTYDYN 8
L+YDYN
Sbjct: 255 LSYDYN 260


>sp|SYH_HALWD|HISTIDINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EELTYDYNFL 10
EELT DY L
Sbjct: 334 EELTTDYYIL 343


>sp|G1PDH_META3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus aeolicus (strain ATCC

Query: 1 EELTYDYNFL 10
E+L YD N L
Sbjct: 296 EQLGYDKNIL 305


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ELTYDYN 8
ELT+D+N
Sbjct: 82 ELTFDHN 88


>sp|SYH_HALLT|HISTIDINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EELTYDYNFL 10
EELT DY L
Sbjct: 338 EELTTDYYVL 347




312|SequenceR|1565|1556|KQIGSEELTY

>sp|RTCA_METJA|RNA 3'-terminal phosphate cyclase|Methanocaldococcus jannaschii

Query: 2 QIGSEELTY 10
+GSEELT+
Sbjct: 69 NVGSEELTF 77


>sp|RTCA_SACS2|RNA 3'-terminal phosphate cyclase|Saccharolobus solfataricus (strain

Query: 2 QIGSEELTY 10
++GS+ELT+
Sbjct: 67 EVGSKELTF 75


>sp|PUR1_PYRAB|AMIDOPHOSPHORIBOSYLTRANSFERASE abyssi (strain GE5 /

Query: 1 KQIGSEELTY 10
K+IG++ L Y
Sbjct: 407 KEIGADSLAY 416


>sp|ARADH_SACS2|D-ARABINOSE 1-dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 3 IGSEELTY 10
+G+EE TY
Sbjct: 251 VGTEETTY 258


>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 1 KQIGSEELTY 10
K+IG++ L Y
Sbjct: 407 KEIGADSLAY 416




313|SequenceR|1570|1561|NTEESKQIGS

>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 NTEESKQI 8
N EE+KQI
Sbjct: 19 NQEEAKQI 26


>sp|SUI1_PYRAE|PROTEIN translation factor SUI1 homolog|Pyrobaculum aerophilum (strain

Query: 1 NTEESKQIG 9
N+E++KQ+G
Sbjct: 56 NSEDAKQLG 64




314|SequenceR|1575|1566|AVEQQNTEES

>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 1 AVEQQNTEE 9
AVE++N EE
Sbjct: 302 AVEEKNVEE 310


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 1 AVEQQNTEE 9
AVE++N EE
Sbjct: 302 AVEEKNVEE 310


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 AVEQQNTEE 9
AVE++N EE
Sbjct: 302 AVEEKNVEE 310


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 1 AVEQQNTEE 9
AVE++N EE
Sbjct: 302 AVEEKNVEE 310


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 AVEQQNTEE 9
AVE++N EE
Sbjct: 302 AVEEKNVEE 310


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 AVEQQNTEE 9
AVE++N EE
Sbjct: 302 AVEEKNVEE 310




315|SequenceR|1580|1571|KALSNAVEQQ

>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KALSNAVEQQ 10
KALS +EQQ
Sbjct: 405 KALSKPLEQQ 414


>sp|MTMC1_METBA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina barkeri

Query: 1 KALSNAVE 8
KA+SNA+E
Sbjct: 70 KAMSNAME 77


>sp|MTSB_METBA|METHYLATED-THIOL--CORRINOID protein MtsB|Methanosarcina barkeri

Query: 1 KALSNAVEQQ 10
KAL+NA+E +
Sbjct: 214 KALANALEPE 223




316|SequenceR|1585|1576|AHVSLKALSN

>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AHVSLKALS 9
AH+ KALS
Sbjct: 231 AHIDRKALS 239




317|SequenceR|1590|1581|GLRSLAHVSL

>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LRSLAHVSL 10
+RSL H++L
Sbjct: 143 IRSLQHITL 151


>sp|HIS6_IGNH4|IMIDAZOLE glycerol phosphate synthase subunit|Ignicoccus hospitalis (strain

Query: 1 GLRSLAHV 8
G+RSL H+
Sbjct: 83 GVRSLEHI 90


>sp|HTPX1_SACS2|PROTEASE HtpX homolog 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GLRSLAHVSL 10
G+ SL H+SL
Sbjct: 28 GIASLLHISL 37




318|SequenceR|1595|1586|EALYGGLRSL

>sp|Y380_METJA|UNCHARACTERIZED protein MJ0380|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EALYGGLR 8
EALY GLR
Sbjct: 50 EALYKGLR 57


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 LYGGLRSL 10
L GGLRSL
Sbjct: 616 LVGGLRSL 623


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 ALYGGLRSL 10
AL GG+RS+
Sbjct: 616 ALIGGMRSI 624


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus (Sulfolobus

Query: 3 LYGGLR 8
+YGGLR
Sbjct: 244 IYGGLR 249


>sp|DTDA_PYRAB|D-AMINOACYL-TRNA deacylase|Pyrococcus abyssi (strain GE5 /

Query: 1 EALYGG 6
EA+YGG
Sbjct: 99 EAMYGG 104


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 LYGGLRSL 10
+YGG+R L
Sbjct: 216 VYGGVREL 223


>sp|Y1676_METJA|UNCHARACTERIZED protein MJ1676|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LYGGLR 8
LYGG+R
Sbjct: 228 LYGGIR 233


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 1 EALYGGL 7
EA+YGG+
Sbjct: 71 EAVYGGV 77




319|SequenceR|1600|1591|PTAQEEALYG

>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PTAQEEALYG 10
P+ QEE LYG
Sbjct: 57 PSLQEEKLYG 66


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PTAQEEALYG 10
P+ QEE LYG
Sbjct: 57 PSTQEEKLYG 66


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PTAQEEALYG 10
P+ +EE LYG
Sbjct: 57 PSEKEELLYG 66


>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PTAQEEALYG 10
PTA+E+ YG
Sbjct: 290 PTAEEQRKYG 299


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PTAQEEALYG 10
PTA+E+ YG
Sbjct: 290 PTAEEQRKYG 299


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 2 TAQEEALYG 10
TA EEA YG
Sbjct: 511 TASEEAAYG 519


>sp|COFH_METTH|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanothermobacter

Query: 1 PTAQEEALY 9
P +EEALY
Sbjct: 18 PITKEEALY 26


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 3 AQEEALYG 10
A+EE LYG
Sbjct: 81 AKEEGLYG 88


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 2 TAQEEALYG 10
TAQ+ A YG
Sbjct: 197 TAQDTACYG 205


>sp|CDC61_ARCFU|ORC1-TYPE DNA replication protein 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EEALYG 10
EEALYG
Sbjct: 155 EEALYG 160


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 2 TAQEEALYG 10
TAQ+ A YG
Sbjct: 192 TAQDTAAYG 200


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PTAQEEALY 9
PT EEAL+
Sbjct: 19 PTPAEEALF 27




320|SequenceR|1605|1596|ITPNEPTAQE

>sp|BIOY_METTH|PROBABLE biotin transporter BioY|Methanothermobacter thermautotrophicus

Query: 1 ITPNEPTAQE 10
ITP EP +E
Sbjct: 136 ITPKEPYGEE 145


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 ITPNEPTAQ 9
ITPN P A+
Sbjct: 1025 ITPNRPIAR 1033


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 ITPNEPTAQE 10
ITPN P + E
Sbjct: 292 ITPNRPMSME 301


>sp|METK_METTM|S-ADENOSYLMETHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 ITPNEPTAQE 10
ITPN P + E
Sbjct: 293 ITPNRPMSME 302


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ITPNEPTAQE 10
ITPN P + E
Sbjct: 290 ITPNRPMSME 299


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ITPNEPTAQE 10
ITPN P + E
Sbjct: 290 ITPNRPMSME 299


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ITPNEPTAQE 10
ITPN P + E
Sbjct: 290 ITPNRPMSME 299


>sp|METK_HALWD|S-ADENOSYLMETHIONINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ITPNEPTAQE 10
ITPN P + E
Sbjct: 293 ITPNRPMSME 302


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITPNEPTAQE 10
I PN+P +E
Sbjct: 385 IVPNKPDEEE 394


>sp|METK_METST|S-ADENOSYLMETHIONINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ITPNEPTAQE 10
ITPN P + E
Sbjct: 299 ITPNRPMSME 308


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ITPNEPTAQE 10
ITPN P + E
Sbjct: 292 ITPNRPMSME 301


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 1 ITPNEPTAQE 10
ITP EP+ +E
Sbjct: 203 ITPGEPSYRE 212


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 1 ITPNEPTAQE 10
ITP EP+ +E
Sbjct: 200 ITPGEPSYRE 209


>sp|METK_METTH|S-ADENOSYLMETHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ITPNEPTAQE 10
ITPN P + E
Sbjct: 293 ITPNRPMSME 302


>sp|METK_METTP|S-ADENOSYLMETHIONINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ITPNEPTAQE 10
ITPN P + E
Sbjct: 291 ITPNRPMSLE 300


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 TPNEPTA 8
TPN PT
Sbjct: 172 TPNNPTG 178


>sp|RL18A_NATPD|LARGE ribosomal subunit protein eL20|Natronomonas pharaonis (strain

Query: 3 PNEPTAQE 10
PNE AQE
Sbjct: 26 PNEDVAQE 33


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 3 PNEPTAQE 10
PNEP +E
Sbjct: 392 PNEPELEE 399


>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 TPNEPTA 8
TPN PT
Sbjct: 169 TPNNPTG 175


>sp|HIS8_METS3|HISTIDINOL-PHOSPHATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 TPNEPTA 8
TPN PT
Sbjct: 164 TPNNPTG 170


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 TPNEPTA 8
TPN PT
Sbjct: 156 TPNNPTG 162


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TPNEPTA 8
TPN PT
Sbjct: 172 TPNNPTG 178




321|SequenceR|1610|1601|ALSKRITPNE

>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LSKRITPN 9
+S RITPN
Sbjct: 36 VSTRITPN 43


>sp|RNH2_METS3|RIBONUCLEASE HII|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 SKRITPN 9
SKR+TPN
Sbjct: 41 SKRLTPN 47


>sp|SERB_METJA|PHOSPHOSERINE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KRITPNE 10
KRITP E
Sbjct: 73 KRITPTE 79




322|SequenceR|1615|1606|PTLMGALSKR

>sp|DNLI_META3|DNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PTLMGALSK 9
PT++GA SK
Sbjct: 174 PTILGAFSK 182


>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter thermautotrophicus

Query: 1 PTLMGALS 8
PTL+GALS
Sbjct: 254 PTLLGALS 261


>sp|TRUA_METKA|TRNA pseudouridine synthase A|Methanopyrus kandleri (strain AV19 /

Query: 1 PTLMGALSK 9
PT+ GAL K
Sbjct: 24 PTIEGALRK 32


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PTLMGALS 8
P LMG LS
Sbjct: 790 PVLMGGLS 797




323|SequenceR|1620|1611|KRAVYPTLMG

>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 2 RAVYPTLMG 10
RA+YP+ +G
Sbjct: 404 RAIYPSDIG 412


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KRAVYPTLM 9
K+A YP +M
Sbjct: 3 KKATYPKVM 11


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KRAVYPTL 8
K VYPTL
Sbjct: 268 KYVVYPTL 275




324|SequenceR|1625|1616|SAVALKRAVY

>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans (strain

Query: 1 SAVALKRAVY 10
+A LKRAVY
Sbjct: 269 NASDLKRAVY 278


>sp|XYLG_SULAC|XYLOSE/ARABINOSE import ATP-binding protein XylG|Sulfolobus acidocaldarius (strain

Query: 2 AVALKRAVY 10
AVA+ RAVY
Sbjct: 149 AVAVARAVY 157


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 4 ALKRAVY 10
A+KRA+Y
Sbjct: 1129 AIKRAIY 1135


>sp|RS8E_STAMF|SMALL ribosomal subunit protein eS8|Staphylothermus marinus (strain

Query: 3 VALKRAVY 10
+ LKRAVY
Sbjct: 55 IRLKRAVY 62




325|SequenceR|1630|1621|LIETVSAVAL

>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LIETVSAVA 9
L+ET SAVA
Sbjct: 244 LVETTSAVA 252


>sp|HIS6_HALSA|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum

Query: 1 LIETVSAVA 9
+++TVSAVA
Sbjct: 68 MLDTVSAVA 76


>sp|HIS6_HALS3|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum

Query: 1 LIETVSAVA 9
+++TVSAVA
Sbjct: 68 MLDTVSAVA 76


>sp|HIS6_NATPD|IMIDAZOLE glycerol phosphate synthase subunit|Natronomonas pharaonis

Query: 1 LIETVSAVA 9
+++TVSAVA
Sbjct: 68 MLDTVSAVA 76




326|SequenceR|1635|1626|SNLMKLIETV

>sp|PSB_METS3|PROTEASOME subunit beta|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 NLMKLIE 8
NLMK+IE
Sbjct: 62 NLMKIIE 68


>sp|Y181_METJA|UNCHARACTERIZED protein MJ0181|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SNLMKLIET 9
+NL K++ET
Sbjct: 236 TNLFKMVET 244


>sp|HEM1_SACS2|GLUTAMYL-TRNA reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SNLMKLIETV 10
S +MK IET+
Sbjct: 327 SKIMKRIETI 336




327|SequenceR|1640|1631|PSETNSNLMK

>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PSETNSNLMK 10
PSE NLMK
Sbjct: 333 PSEKRHNLMK 342


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PSETNSNLMK 10
P E N NL+K
Sbjct: 797 PREFNDNLVK 806


>sp|HIS8_PYRFU|HISTIDINOL-PHOSPHATE aminotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PSETNSNLMK 10
PSE N LMK
Sbjct: 277 PSEANFLLMK 286


>sp|Y762_ARCFU|UNCHARACTERIZED protein AF_0762|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSETNSNLMK 10
P E N+NL K
Sbjct: 88 PDEFNANLSK 97




328|SequenceR|1645|1636|NWILYPSETN

>sp|HOSA_SACS2|HOMOCITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 ILYPSET 9
ILYPS+T
Sbjct: 173 ILYPSKT 179


>sp|HOSA_SACI7|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 ILYPSET 9
ILYPS+T
Sbjct: 173 ILYPSKT 179


>sp|HOSA_SACI6|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 ILYPSET 9
ILYPS+T
Sbjct: 173 ILYPSKT 179


>sp|HOSA_SACI4|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 ILYPSET 9
ILYPS+T
Sbjct: 173 ILYPSKT 179


>sp|HOSA_SACI3|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 ILYPSET 9
ILYPS+T
Sbjct: 173 ILYPSKT 179


>sp|HOSA_SACI2|HOMOCITRATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 ILYPSET 9
ILYPS+T
Sbjct: 173 ILYPSKT 179


>sp|HOSA_SACI1|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 ILYPSET 9
ILYPS+T
Sbjct: 173 ILYPSKT 179


>sp|ENDA_NANEQ|TRNA-SPLICING endonuclease|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 WILYP 6
W+LYP
Sbjct: 105 WVLYP 109


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus

Query: 2 WILYPSET 9
W LYP+ T
Sbjct: 91 WALYPNLT 98


>sp|HIS8_METAR|HISTIDINOL-PHOSPHATE aminotransferase|Methanocella arvoryzae (strain DSM 22066

Query: 4 LYPSETN 10
+YPSE N
Sbjct: 292 VYPSEAN 298


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 WILYPSETN 10
W L PS+ N
Sbjct: 32 WTLNPSQDN 40


>sp|HOSA_SULAC|HOMOCITRATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 ILYPSET 9
+LYPS T
Sbjct: 180 VLYPSRT 186


>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 4 LYPSETN 10
+YP+ETN
Sbjct: 303 VYPTETN 309


>sp|Y978_PYRFU|UPF0252 protein PF0978|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NWILYPSE 8
N+IL PSE
Sbjct: 91 NYILRPSE 98


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LYPSETN 10
+YPSE N
Sbjct: 306 VYPSEAN 312


>sp|HIS8_META3|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 LYPSETN 10
+YPSE N
Sbjct: 303 VYPSEAN 309


>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 1 NWILYPSET 9
+W +P ET
Sbjct: 135 DWCFFPDET 143




329|SequenceR|1650|1641|ARTSNNWILY

>sp|MPTN_METMP|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RTSNNWI 8
RTS+NWI
Sbjct: 204 RTSDNWI 210


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 NNWILY 10
NNW+LY
Sbjct: 250 NNWLLY 255


>sp|SFSA_METST|SUGAR fermentation stimulation protein homolog|Methanosphaera

Query: 2 RTSNNWIL 9
+ NNWIL
Sbjct: 73 KNKNNWIL 80


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 NWILY 10
NWILY
Sbjct: 473 NWILY 477


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 NWILY 10
NWILY
Sbjct: 470 NWILY 474


>sp|FPOL_METMA|F(420)H(2) dehydrogenase subunit L|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 SNNWILY 10
S+NWI Y
Sbjct: 441 SSNWIPY 447




330|SequenceR|1655|1646|FELLEARTSN

>sp|SYY_NATPD|TYROSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FELLEART 8
FELLEAR+
Sbjct: 84 FELLEARS 91


>sp|RS7_META3|SMALL ribosomal subunit protein uS7|Methanococcus aeolicus (strain ATCC

Query: 1 FELLEARTS 9
FE++E RT+
Sbjct: 80 FEIIEKRTN 88




331|SequenceR|1660|1651|QQSELFELLE

>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 1 QQSELFELLE 10
QQ LF+LLE
Sbjct: 88 QQQHLFDLLE 97


>sp|PTH_HALMA|PEPTIDYL-TRNA hydrolase|Haloarcula marismortui (strain ATCC 43049

Query: 2 QSELFELLE 10
+SELFEL +
Sbjct: 56 ESELFELAD 64




332|SequenceR|1665|1656|KIMNEQQSEL

>sp|PDXS_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Hyperthermus butylicus (strain

Query: 2 IMNEQQSEL 10
+ NEQQ+E+
Sbjct: 60 VTNEQQAEI 68


>sp|PFDA_SULTO|PREFOLDIN subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KIMNEQQSEL 10
K++N+++SEL
Sbjct: 102 KVLNDKKSEL 111


>sp|ASSY_METAC|ARGININOSUCCINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KIMNEQQSEL 10
KI++EQ SEL
Sbjct: 298 KIVDEQWSEL 307




333|SequenceR|1670|1661|DCDGKKIMNE

>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DGKKIMNE 10
DGKKI+NE
Sbjct: 269 DGKKILNE 276


>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DCDGKKIMN 9
DC+GK++ N
Sbjct: 50 DCEGKEVDN 58


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DCDGKKIMN 9
DC+GK++ N
Sbjct: 50 DCEGKEVDN 58


>sp|SPEE_THEAC|POLYAMINE aminopropyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DGKKIMNE 10
D +KIMNE
Sbjct: 177 DTRKIMNE 184


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC

Query: 1 DCDGKKIMN 9
D DG+K+M+
Sbjct: 47 DLDGRKLMD 55


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 2 CDGKKIM 8
CDGK+++
Sbjct: 750 CDGKEVL 756


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DCDGKKIMNE 10
DC KK+ NE
Sbjct: 182 DCVDKKLRNE 191


>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DCDGKKIMNE 10
DC KK+ NE
Sbjct: 190 DCVDKKLRNE 199


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DCDGKKIMNE 10
DC KK+ NE
Sbjct: 190 DCVDKKLRNE 199


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DCDGKKIMNE 10
DC KK+ NE
Sbjct: 190 DCVDKKLRNE 199


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 DCDGKKIMNE 10
DC KK+ NE
Sbjct: 190 DCVDKKLRNE 199


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DCDGKKIMNE 10
DC KK+ NE
Sbjct: 190 DCVDKKLRNE 199


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DCDGKKIMNE 10
DC KK+ NE
Sbjct: 190 DCVDKKLRNE 199


>sp|FEN_SULTO|FLAP endonuclease 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DCDGKKIMN 9
DCD KI++
Sbjct: 303 DCDSNKILD 311


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 DGKKIMNE 10
+GKKI+NE
Sbjct: 269 NGKKILNE 276


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 1 DCDGKKIMNE 10
D DG KI+ E
Sbjct: 357 DADGIKILGE 366


>sp|CDAT8_METKA|TRNA(CYTOSINE(8)) deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 DGKKIMNE 10
D KKI+NE
Sbjct: 11 DVKKILNE 18


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 3 DGKKIMN 9
DGKKI N
Sbjct: 428 DGKKITN 434


>sp|SUCC2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 3 DGKKIMNE 10
+G+KIM+E
Sbjct: 345 EGRKIMDE 352


>sp|RNP2_METLZ|RIBONUCLEASE P protein component 2|Methanocorpusculum labreanum (strain ATCC

Query: 2 CDGKKIMN 9
C GKK+ N
Sbjct: 122 CAGKKVNN 129


>sp|PYRE_SULAC|OROTATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DCDGKKIM 8
D DGKK++
Sbjct: 102 DVDGKKVI 109


>sp|RRP41_CENSY|EXOSOME complex component Rrp41|Cenarchaeum symbiosum (strain A)

Query: 2 CDGKKI 7
CDG+KI
Sbjct: 18 CDGRKI 23




334|SequenceR|1675|1666|SGYTKDCDGK

>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 2 GYTKDCDG 9
GYT+DC G
Sbjct: 738 GYTRDCYG 745


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 GYTKDCDGK 10
G TKD DGK
Sbjct: 297 GMTKDADGK 305


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 GYTKDCDGK 10
G TKD DGK
Sbjct: 297 GMTKDADGK 305


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GYTKDCDGK 10
GYT D +GK
Sbjct: 847 GYTHDFEGK 855


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 GYTKDCDGK 10
GYT D +GK
Sbjct: 849 GYTHDFEGK 857


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 GYTKDCDGK 10
G TKD +GK
Sbjct: 300 GMTKDAEGK 308


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 2 GYTKDCDGK 10
G TKD +GK
Sbjct: 299 GMTKDAEGK 307


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 GYTKDCDGK 10
G TKD +GK
Sbjct: 300 GMTKDAEGK 308


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 GYTKDCDGK 10
GYT D +GK
Sbjct: 858 GYTHDFEGK 866


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 GYTKDCDGK 10
GY D DGK
Sbjct: 760 GYETDVDGK 768


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 GYTKDCDGK 10
G TKD +GK
Sbjct: 303 GLTKDSEGK 311


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 2 GYTKDC 7
GYT DC
Sbjct: 128 GYTTDC 133


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYTKDCDGK 10
G TKD +GK
Sbjct: 304 GITKDTNGK 312


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYTKDCDGK 10
G TKD +GK
Sbjct: 304 GITKDTNGK 312


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYTKDCDGK 10
G TKD +GK
Sbjct: 304 GITKDTNGK 312


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYTKDCDGK 10
G TKD +GK
Sbjct: 304 GITKDTNGK 312


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYTKDCDGK 10
G TKD +GK
Sbjct: 304 GITKDTNGK 312


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYTKDCDGK 10
G TKD +GK
Sbjct: 304 GITKDTNGK 312


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 1 SGYTKDCD 8
S Y K+CD
Sbjct: 162 SDYVKECD 169


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 3 YTKDCD 8
YT DCD
Sbjct: 142 YTVDCD 147


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 1 SGYTKDCD 8
S + KDCD
Sbjct: 594 SKFVKDCD 601


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SGYTKDCD 8
S + KDCD
Sbjct: 594 SKFVKDCD 601


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 1 SGYTKDCD 8
S + KDCD
Sbjct: 594 SKFVKDCD 601


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 1 SGYTKDCD 8
S + KDCD
Sbjct: 594 SKFVKDCD 601


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 YTKDCDG 9
Y KDC G
Sbjct: 397 YCKDCGG 403


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 GYTKDCDGK 10
G T+D +GK
Sbjct: 299 GMTRDAEGK 307


>sp|TRM1_METJA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocaldococcus

Query: 2 GYTKDCDG 9
GY KD +G
Sbjct: 242 GYVKDVNG 249


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 GYTKDCDGK 10
GYT+D GK
Sbjct: 762 GYTEDIYGK 770


>sp|RFRNP_METMA|RNA-FREE ribonuclease P|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GYTKDCDG 9
GYT C+G
Sbjct: 23 GYTSLCEG 30


>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 GYTKDCDGK 10
GYT DGK
Sbjct: 130 GYTDILDGK 138


>sp|RFRNP_METAC|RNA-FREE ribonuclease P|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GYTKDCDG 9
GYT C+G
Sbjct: 23 GYTSLCEG 30




335|SequenceR|1680|1671|SYVFESGYTK

>sp|Y3506_METJA|UNCHARACTERIZED protein MJECL06|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FESGYTK 10
FESGY K
Sbjct: 32 FESGYCK 38


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VFESGY 8
VFESGY
Sbjct: 667 VFESGY 672


>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 YVFESGYT 9
YVF GYT
Sbjct: 28 YVFLEGYT 35


>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 3 VFESGYT 9
+FE GYT
Sbjct: 207 LFEQGYT 213


>sp|VHUG_METJA|F420-NON-REDUCING hydrogenase vhu subunit G|Methanocaldococcus jannaschii (strain

Query: 3 VFESGYT 9
+FE GYT
Sbjct: 208 LFEQGYT 214


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VFESGYTK 10
+FE GY K
Sbjct: 126 IFEDGYVK 133


>sp|BRIX_SULTO|PROBABLE Brix domain-containing ribosomal biogenesis|Sulfurisphaera tokodaii

Query: 1 SYVFESGYTK 10
+YVFE +TK
Sbjct: 146 NYVFELKFTK 155


>sp|Y339_METJA|UNCHARACTERIZED protein MJ0339|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FESGYTK 10
FES YTK
Sbjct: 94 FESDYTK 100


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 3 VFESGYTK 10
++E G+TK
Sbjct: 238 IYEGGFTK 245


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 2 YVFESGYTK 10
Y E+GY K
Sbjct: 86 YAVEAGYVK 94




336|SequenceR|1685|1676|EKAHDSYVFE

>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKAHDSYVFE 10
EKA D Y+F+
Sbjct: 38 EKAKDCYLFD 47


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KAHDSYVFE 10
+ HD +VFE
Sbjct: 162 RLHDGFVFE 170


>sp|AATF_DESSY|A-TYPE ATP synthase subunit F|Desulfurococcus sp. (strain SY)

Query: 3 AHDSYVFE 10
AH+ Y FE
Sbjct: 20 AHEVYAFE 27


>sp|SYR_METKA|ARGININE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 AHDSYVFE 10
AHD +V+E
Sbjct: 275 AHDRFVYE 282


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 1 EKAHDSYVFE 10
+KA D+YV++
Sbjct: 163 QKALDNYVYK 172


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 4 HDSYVFE 10
HDS+V E
Sbjct: 264 HDSFVIE 270




337|SequenceR|1690|1681|EGVILEKAHD

>sp|RL2_METAR|LARGE ribosomal subunit protein uL2|Methanocella arvoryzae (strain DSM

Query: 1 EGVILEKAHD 10
EG+I E HD
Sbjct: 40 EGIITEVVHD 49


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 1 EGVILEKA 8
EG I+EKA
Sbjct: 198 EGAIIEKA 205


>sp|TRUD_META3|PROBABLE tRNA pseudouridine synthase D|Methanococcus aeolicus (strain ATCC

Query: 1 EGVILEKAHD 10
EG++LE D
Sbjct: 33 EGIVLEAGKD 42


>sp|ALBA2_SULTO|DNA/RNA-BINDING protein Alba 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EGVILEKA 8
+G+ILEKA
Sbjct: 60 DGIILEKA 67




338|SequenceR|1695|1686|VRVFIEGVIL

>sp|CAS1B_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RVFIEGVIL 10
R F+EG IL
Sbjct: 106 RAFVEGAIL 114


>sp|RL24_HYPBU|LARGE ribosomal subunit protein uL24|Hyperthermus butylicus (strain DSM

Query: 1 VRVFIEGVIL 10
+R+F+EGV +
Sbjct: 75 MRIFVEGVTI 84


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 RVFIEGVIL 10
R+ IEGVIL
Sbjct: 142 RIDIEGVIL 150


>sp|T2M2_AERPE|PUTATIVE type II restriction enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 VRVFIEGV 8
+RV+IEGV
Sbjct: 123 IRVYIEGV 130


>sp|RL24_PYRCJ|LARGE ribosomal subunit protein uL24|Pyrobaculum calidifontis (strain

Query: 1 VRVFIEG 7
VR+F+EG
Sbjct: 75 VRIFVEG 81


>sp|Y1098_METJA|UNCHARACTERIZED protein MJ1098|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VRVFIEGVIL 10
+R FI+G++L
Sbjct: 55 LRTFIDGLLL 64


>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RVFIEGVIL 10
R+ IEGVIL
Sbjct: 331 RLSIEGVIL 339


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 RVFIEGVIL 10
R+ IEGVIL
Sbjct: 330 RLSIEGVIL 338


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 RVFIEGVIL 10
R+ IEGVIL
Sbjct: 330 RLSIEGVIL 338


>sp|RL24_PYRHO|LARGE ribosomal subunit protein uL24|Pyrococcus horikoshii (strain ATCC

Query: 2 RVFIEGVIL 10
R+++EGV L
Sbjct: 75 RIYVEGVTL 83


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RVFIEGVIL 10
RV+IEG+ L
Sbjct: 213 RVYIEGIDL 221


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RVFIEGVIL 10
R+ IEGV+L
Sbjct: 329 RLSIEGVVL 337


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RVFIEGVIL 10
R+ IEGVIL
Sbjct: 331 RLSIEGVIL 339


>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 1 VRVFIEGVI 9
VR+F EG++
Sbjct: 271 VRIFEEGMV 279


>sp|ARGC_METM6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C6 /

Query: 1 VRVFIEGVI 9
VR+F EG++
Sbjct: 271 VRIFEEGMV 279




339|SequenceR|1700|1691|PVENYVRVFI

>sp|PHAC_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula marismortui (strain ATCC 43049

Query: 1 PVENYVRVFI 10
PVENYV +I
Sbjct: 233 PVENYVTKYI 242


>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 1 PVENYVRVFI 10
PVENYV +I
Sbjct: 233 PVENYVTKYI 242


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 1 PVENYVRVF 9
P EN +RVF
Sbjct: 177 PFENKIRVF 185


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PVENYVRV 8
PVE Y+RV
Sbjct: 396 PVEPYLRV 403


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 1 PVENYVRVFI 10
PVEN+V ++
Sbjct: 221 PVENFVTKYV 230


>sp|MTRH_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina acetivorans (strain

Query: 1 PVENYVRVF 9
P+EN +VF
Sbjct: 275 PIENVEKVF 283


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PVENYVRV 8
P E+YVRV
Sbjct: 230 PDEDYVRV 237


>sp|MDH_PYRAB|MALATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 3 ENYVRV 8
ENYVR+
Sbjct: 9 ENYVRI 14


>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ENYVRV 8
ENY+RV
Sbjct: 9 ENYIRV 14


>sp|MALG_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 2 VENYVRVF 9
+ENYVRV
Sbjct: 52 LENYVRVL 59




340|SequenceR|1705|1696|ELQFTPVENY

>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 ELQFTPVE 8
ELQF PVE
Sbjct: 761 ELQFVPVE 768


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 FTPVENY 10
F PVENY
Sbjct: 129 FIPVENY 135


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 4 FTPVEN 9
FTP+EN
Sbjct: 56 FTPIEN 61


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 4 FTPVEN 9
FTP+EN
Sbjct: 56 FTPIEN 61


>sp|HJC_METTH|CROSSOVER junction endodeoxyribonuclease Hjc|Methanothermobacter

Query: 1 ELQFTPVENY 10
+L+ TP NY
Sbjct: 100 DLELTPSSNY 109


>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 ELQFTPVE 8
+L FTPV+
Sbjct: 370 DLDFTPVD 377


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 FTPVENY 10
F PVE+Y
Sbjct: 280 FNPVEHY 286


>sp|K6PF_PYRHO|ADP-SPECIFIC phosphofructokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ELQFTPVE 8
ELQF P++
Sbjct: 141 ELQFKPIQ 148


>sp|ARCR_HALS3|PROBABLE HTH-type transcriptional regulator ArcR|Halobacterium salinarum

Query: 4 FTPVENY 10
F PV NY
Sbjct: 76 FVPVSNY 82


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELQFTPVENY 10
EL+F +E+Y
Sbjct: 139 ELRFEKIEDY 148




341|SequenceR|1710|1701|FAKPVELQFT

>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 1 FAKPVE 6
FAKPVE
Sbjct: 201 FAKPVE 206


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 AKPVELQ 8
AKPVEL+
Sbjct: 523 AKPVELR 529


>sp|TRUD_PICTO|PROBABLE tRNA pseudouridine synthase D|Picrophilus torridus (strain ATCC

Query: 2 AKPVELQF 9
AKP+ L+F
Sbjct: 382 AKPINLKF 389


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FAKPVELQF 9
F+KPV++ F
Sbjct: 148 FSKPVKVDF 156


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FAKPVELQF 9
FAK EL+F
Sbjct: 227 FAKTFELEF 235


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FAKPVELQF 9
FAK EL+F
Sbjct: 228 FAKTFELEF 236


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 FAKPVELQF 9
FAK EL+F
Sbjct: 227 FAKTFELEF 235


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 FAKPVELQF 9
FAK EL+F
Sbjct: 227 FAKTFELEF 235


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 FAKPVELQF 9
FAK EL+F
Sbjct: 227 FAKTFELEF 235


>sp|PCNA1_SULAC|DNA polymerase sliding clamp 1|Sulfolobus acidocaldarius (strain ATCC

Query: 3 KPVELQF 9
KP+EL+F
Sbjct: 224 KPLELEF 230


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FAKPVELQF 9
FAK EL+F
Sbjct: 227 FAKTFELEF 235




342|SequenceR|1715|1706|LLSAAFAKPV

>sp|RL10E_ARCFU|LARGE ribosomal subunit protein uL16|Archaeoglobus fulgidus (strain ATCC

Query: 2 LSAAFAKPV 10
+ AAF KPV
Sbjct: 111 MRAAFGKPV 119




343|SequenceR|1720|1711|SGIYDLLSAA

>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 1 SGIYDLLSAA 10
SG+YDL+ AA
Sbjct: 263 SGLYDLVDAA 272


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 SGIYDLLSAA 10
SG+YDL+ A
Sbjct: 263 SGLYDLVDAG 272


>sp|MTAP_THEAC|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SGIYDLL 7
SG+YDL+
Sbjct: 14 SGLYDLM 20


>sp|DACZ_HALVD|DIADENYLATE cyclase|Haloferax volcanii (strain ATCC 29605

Query: 1 SGIYDLLS 8
SGIYDL +
Sbjct: 110 SGIYDLFA 117


>sp|PELO_PICTO|PROTEIN pelota homolog|Picrophilus torridus (strain ATCC 700027

Query: 1 SGIYDLLSA 9
SG+Y+LL++
Sbjct: 229 SGVYNLLNS 237


>sp|Y221_METM6|UPF0305 protein MmarC6_0221|Methanococcus maripaludis (strain C6 /

Query: 2 GIYDLLSA 9
GI+DL++A
Sbjct: 18 GIFDLMNA 25


>sp|RF1_HALWD|PEPTIDE chain release factor subunit|Haloquadratum walsbyi (strain DSM

Query: 1 SGIYDLLSAA 10
SG++DL+ +A
Sbjct: 263 SGLHDLVDSA 272




344|SequenceR|1725|1716|LYQAQSGIYD

>sp|GLYA_NATPD|SERINE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LYQAQSGIYD 10
LYQ +SGI D
Sbjct: 413 LYQGESGITD 422


>sp|CH60_METB6|CHAPERONIN GroEL|Methanoregula boonei (strain DSM 21154

Query: 2 YQAQSGIYD 10
Y A++GIY+
Sbjct: 478 YNAKTGIYE 486


>sp|SUCC_HALSA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halobacterium salinarum (strain

Query: 2 YQAQSGIYD 10
YQA++ +YD
Sbjct: 150 YQARNAVYD 158


>sp|SUCC_HALS3|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halobacterium salinarum (strain

Query: 2 YQAQSGIYD 10
YQA++ +YD
Sbjct: 150 YQARNAVYD 158


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LYQAQSGIY 9
LY +SG+Y
Sbjct: 235 LYDPESGMY 243


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 2 YQAQSGIYD 10
Y +SG+YD
Sbjct: 259 YTDESGLYD 267




345|SequenceR|1730|1721|AMFTHLYQAQ

>sp|ARLY_NITMS|ARGININOSUCCINATE lyase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 MFTHLYQAQ 10
++THL QAQ
Sbjct: 147 LYTHLQQAQ 155


>sp|ARLY_METVS|ARGININOSUCCINATE lyase|Methanococcus vannielii (strain ATCC 35089

Query: 3 FTHLYQAQ 10
+THL QAQ
Sbjct: 154 YTHLQQAQ 161


>sp|ARLY_METMP|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FTHLYQAQ 10
+THL QAQ
Sbjct: 154 YTHLQQAQ 161


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 3 FTHLYQAQ 10
+THL QAQ
Sbjct: 154 YTHLQQAQ 161


>sp|ARLY_METM6|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C6 /

Query: 3 FTHLYQAQ 10
+THL QAQ
Sbjct: 154 YTHLQQAQ 161


>sp|ARLY_METM5|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C5 /

Query: 3 FTHLYQAQ 10
+THL QAQ
Sbjct: 154 YTHLQQAQ 161


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MFTHLYQAQ 10
+FTHL AQ
Sbjct: 147 LFTHLQPAQ 155


>sp|TRUD_THEVO|PROBABLE tRNA pseudouridine synthase D|Thermoplasma volcanium (strain ATCC

Query: 2 MFTHLYQA 9
MF H YQ+
Sbjct: 244 MFVHAYQS 251


>sp|TRUD_THEAC|PROBABLE tRNA pseudouridine synthase D|Thermoplasma acidophilum (strain ATCC

Query: 2 MFTHLYQA 9
MF H YQ+
Sbjct: 248 MFVHAYQS 255


>sp|TRUD_METTH|PROBABLE tRNA pseudouridine synthase D|Methanothermobacter

Query: 2 MFTHLYQA 9
MF H YQ+
Sbjct: 265 MFVHAYQS 272


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 2 MFTHLYQA 9
MF H YQ+
Sbjct: 266 MFVHAYQS 273


>sp|TRUD_METBU|PROBABLE tRNA pseudouridine synthase D|Methanococcoides burtonii (strain DSM

Query: 2 MFTHLYQA 9
MF H YQ+
Sbjct: 269 MFVHAYQS 276


>sp|TRUD_METAC|PROBABLE tRNA pseudouridine synthase D|Methanosarcina acetivorans (strain

Query: 2 MFTHLYQA 9
MF H YQ+
Sbjct: 271 MFVHAYQS 278


>sp|TRUD_ARCFU|PROBABLE tRNA pseudouridine synthase D|Archaeoglobus fulgidus (strain ATCC

Query: 2 MFTHLYQA 9
MF H YQ+
Sbjct: 256 MFVHAYQS 263


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 AMFTHLYQA 9
A F H+Y+A
Sbjct: 206 AYFAHIYEA 214




346|SequenceR|1735|1726|AAHTIAMFTH

>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 AHTIAMFTH 10
HTI M TH
Sbjct: 444 GHTIVMVTH 452


>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 AHTIAMFTH 10
HTI M TH
Sbjct: 440 GHTILMVTH 448


>sp|XERA_THEKO|TYROSINE recombinase XerA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AAHTIAMFTH 10
+ HTI M+T+
Sbjct: 21 SPHTIRMYTY 30


>sp|SYR_HALLT|ARGININE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 HTIAMFT 9
HTIA FT
Sbjct: 542 HTIATFT 548




347|SequenceR|1740|1731|ESEVKAAHTI

>sp|AROA_SULTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SEVKAAHTI 10
SEVKA H I
Sbjct: 351 SEVKAGHVI 359


>sp|CBIT_SULAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 ESEVKAAHTI 10
ES VKA HT+
Sbjct: 143 ESAVKALHTL 152




348|SequenceR|1745|1736|RDGHQESEVK

>sp|Y1589_METAC|UPF0228 protein MA_1589|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RDGHQESEVK 10
+DG ESEVK
Sbjct: 52 KDGISESEVK 61


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 1 RDGHQESEV 9
R GH+ESEV
Sbjct: 386 RMGHRESEV 394


>sp|Y511_METAC|UPF0228 protein MA_0511|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RDGHQESEVK 10
+DG ESEV+
Sbjct: 49 KDGISESEVR 58


>sp|Y3125_METAC|UPF0228 protein MA_3125|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DGHQESEVK 10
DG ESEVK
Sbjct: 49 DGASESEVK 57


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DGHQESEV 9
DGH E+E+
Sbjct: 125 DGHIEAEI 132


>sp|Y2179_THEKO|UNCHARACTERIZED protein TK2179|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RDGHQESEV 9
RDG E+EV
Sbjct: 233 RDGRVENEV 241




349|SequenceR|1750|1741|EVRPLRDGHQ

>sp|Y101_ARCFU|UNCHARACTERIZED protein AF_0101|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVRPLRDGH 9
E++PLR+G+
Sbjct: 65 EIKPLREGN 73


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 EVRPLRDG 8
E++PLRDG
Sbjct: 15 ELKPLRDG 22


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 EVRPLRDG 8
E RPLR+G
Sbjct: 15 EFRPLREG 22


>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 1 EVRPLRDGHQ 10
E PL +GH+
Sbjct: 51 EYNPLHNGHK 60


>sp|APGM_IGNH4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EVRPLRD 7
E RPLRD
Sbjct: 181 EARPLRD 187


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVRPLRDG 8
E +PL+DG
Sbjct: 345 ESKPLKDG 352


>sp|PYRI_METTP|ASPARTATE carbamoyltransferase regulatory chain|Methanothrix

Query: 1 EVRPLRDG 8
+VRP+R G
Sbjct: 7 KVRPIRSG 14


>sp|Y834_PYRAB|UPF0212 protein PYRAB08340|Pyrococcus abyssi (strain GE5 /

Query: 1 EVRPLRDGHQ 10
E+R L DG +
Sbjct: 109 EIRELHDGRE 118


>sp|SPSS2_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EVRPLRDGH 9
E+RP D H
Sbjct: 126 EIRPTADHH 134


>sp|PYRE_AERPE|OROTATE phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VRPLRDGH 9
VRP R GH
Sbjct: 95 VRPERKGH 102


>sp|RIFK_HYPBU|RIBOFLAVIN kinase|Hyperthermus butylicus (strain DSM 5456

Query: 2 VRPLRDGH 9
+RPL GH
Sbjct: 100 IRPLLSGH 107


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EVRPLRDG 8
E +PLR+G
Sbjct: 14 EFKPLREG 21


>sp|HIS7_PYRAE|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EVRPLRDGHQ 10
E+R L DGH
Sbjct: 52 ELRKLDDGHH 61


>sp|HEM3_PYRCJ|PROBABLE porphobilinogen deaminase|Pyrobaculum calidifontis (strain DSM

Query: 1 EVRPLR 6
EVRPLR
Sbjct: 141 EVRPLR 146


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EVRPLRDG 8
EVR L+DG
Sbjct: 571 EVRDLKDG 578


>sp|GCS2_HALSA|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 RPLRDGH 9
R +RDGH
Sbjct: 292 RAMRDGH 298


>sp|GCS2_HALS3|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 RPLRDGH 9
R +RDGH
Sbjct: 292 RAMRDGH 298


>sp|RTCA_AERPE|RNA 3'-terminal phosphate cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EVRPLRDGH 9
E+R LR GH
Sbjct: 153 EIRVLRRGH 161


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 1 EVRPLR 6
EVRPLR
Sbjct: 252 EVRPLR 257


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 3 RPLRDGH 9
+P+R+GH
Sbjct: 73 QPIREGH 79


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EVRPLRDG 8
E +PLR+G
Sbjct: 15 EFKPLREG 22




350|SequenceR|1755|1746|AELAMEVRPL

>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 2 ELAMEVRPL 10
E MEVRPL
Sbjct: 167 ERPMEVRPL 175


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 2 ELAMEVRPL 10
EL +EV+P+
Sbjct: 221 ELGLEVKPI 229




351|SequenceR|1760|1751|IVNRLAELAM

>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 VNRLAELAM 10
V RLAELA+
Sbjct: 309 VKRLAELAL 317




352|SequenceR|1765|1756|GPNYKIVNRL

>sp|RL18_SACI1|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 GPNYKIVNR 9
GPNYKI +R
Sbjct: 4 GPNYKIKHR 12


>sp|AGOG_AERPE|N-GLYCOSYLASE/DNA lyase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PNYKIVNRL 10
P YK+V+RL
Sbjct: 34 PQYKLVSRL 42


>sp|Y057_METAR|UPF0212 protein UNCMA_00570|Methanocella arvoryzae (strain DSM 22066

Query: 2 PNYKIV 7
PNYK+V
Sbjct: 2 PNYKVV 7


>sp|RL18_SACI7|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 GPNYKIVNR 9
GPNYKI R
Sbjct: 4 GPNYKIKPR 12


>sp|RL18_SACI6|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 GPNYKIVNR 9
GPNYKI R
Sbjct: 4 GPNYKIKPR 12


>sp|RL18_SACI4|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 GPNYKIVNR 9
GPNYKI R
Sbjct: 4 GPNYKIKPR 12


>sp|RL18_SACI3|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 GPNYKIVNR 9
GPNYKI R
Sbjct: 4 GPNYKIKPR 12


>sp|RL18_SACI2|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 GPNYKIVNR 9
GPNYKI R
Sbjct: 4 GPNYKIKPR 12


>sp|KADA_METM6|ADENYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 GPNYKIVN 8
G NYK+VN
Sbjct: 31 GLNYKMVN 38


>sp|KADA_METMP|ADENYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GPNYKIVN 8
G NYK+VN
Sbjct: 31 GLNYKMVN 38


>sp|RL18_METS5|LARGE ribosomal subunit protein uL18|Metallosphaera sedula (strain ATCC

Query: 1 GPNYKIVNR 9
GPNYK+ R
Sbjct: 4 GPNYKVKYR 12


>sp|KADA_METM7|ADENYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 GPNYKIVN 8
G NYK+VN
Sbjct: 31 GLNYKMVN 38


>sp|TSR3_VULDI|16S rRNA aminocarboxypropyltransferase|Vulcanisaeta distributa (strain

Query: 1 GPNYKIVNR 9
GPN+ I+N+
Sbjct: 139 GPNFIIINQ 147


>sp|HCGF_METM7|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 2 PNYKIVN 8
PNY I+N
Sbjct: 33 PNYSIIN 39


>sp|RL18_SACS2|LARGE ribosomal subunit protein uL18|Saccharolobus solfataricus (strain

Query: 1 GPNYKIVNR 9
GPNYK+ R
Sbjct: 7 GPNYKVKPR 15


>sp|HCGF_METM6|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 2 PNYKIVN 8
PNY I+N
Sbjct: 33 PNYSIIN 39


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 3 NYKIVNR 9
N+K+VNR
Sbjct: 155 NWKLVNR 161


>sp|RL18_METBU|LARGE ribosomal subunit protein uL18|Methanococcoides burtonii (strain

Query: 1 GPNYKIVNR 9
GP YK+ R
Sbjct: 4 GPRYKVAFR 12


>sp|KADA_METTL|ADENYLATE kinase|Methanothermococcus thermolithotrophicus

Query: 1 GPNYKIVN 8
G NYK+VN
Sbjct: 31 GINYKMVN 38


>sp|TBP_PYRAE|TATA-BOX-BINDING protein|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GPNYKIVN 8
GP+Y+I N
Sbjct: 5 GPSYRIEN 12


>sp|TBP_PYRNV|TATA-BOX-BINDING protein|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GPNYKIVN 8
GP+Y+I N
Sbjct: 5 GPSYRIEN 12


>sp|RL18_METAR|LARGE ribosomal subunit protein uL18|Methanocella arvoryzae (strain DSM

Query: 1 GPNYKIVNR 9
GP YK+ R
Sbjct: 4 GPRYKVAFR 12


>sp|RL18_SULAC|LARGE ribosomal subunit protein uL18|Sulfolobus acidocaldarius (strain

Query: 1 GPNYKIVNR 9
GPNY+I R
Sbjct: 4 GPNYRIKFR 12


>sp|TBP_PYRCJ|TATA-BOX-BINDING protein|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GPNYKIVN 8
GP+Y+I N
Sbjct: 5 GPSYRIEN 12


>sp|NADE_THESM|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 1 GPNYKIVN 8
G NYK++N
Sbjct: 79 GINYKVIN 86


>sp|HCGF_METM5|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 2 PNYKIVN 8
PNY I+N
Sbjct: 33 PNYGIIN 39


>sp|TBP_PYRIL|TATA-BOX-BINDING protein|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GPNYKIVN 8
GP Y+I N
Sbjct: 5 GPTYRIEN 12


>sp|Y361_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0361|Methanocaldococcus

Query: 3 NYKIVN 8
NYKIVN
Sbjct: 99 NYKIVN 104


>sp|RL18_SULTO|LARGE ribosomal subunit protein uL18|Sulfurisphaera tokodaii (strain

Query: 1 GPNYKIVNR 9
GPNY++ R
Sbjct: 4 GPNYRVKYR 12


>sp|RL18_STAMF|LARGE ribosomal subunit protein uL18|Staphylothermus marinus (strain

Query: 1 GPNYKIVNR 9
GP YK+ R
Sbjct: 4 GPRYKVPKR 12




353|SequenceR|1770|1761|CESESGPNYK

>sp|AROA_SACI3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 CESESGPNY 9
C S+S PNY
Sbjct: 392 CVSKSNPNY 400


>sp|AROA_SACI7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain

Query: 1 CESESGPNY 9
C S+S PNY
Sbjct: 392 CVSKSNPNY 400


>sp|AROA_SACI6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 CESESGPNY 9
C S+S PNY
Sbjct: 392 CVSKSNPNY 400


>sp|AROA_SACI4|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 CESESGPNY 9
C S+S PNY
Sbjct: 392 CVSKSNPNY 400


>sp|AROA_SACI2|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 CESESGPNY 9
C S+S PNY
Sbjct: 392 CVSKSNPNY 400


>sp|AROA_SACI1|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus islandicus (strain

Query: 1 CESESGPNY 9
C S+S PNY
Sbjct: 392 CVSKSNPNY 400


>sp|PURE_METSM|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanobrevibacter

Query: 1 CESESGPNY 9
CE+E G NY
Sbjct: 278 CENELGNNY 286


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 2 ESESGPNYK 10
ESE P+Y+
Sbjct: 444 ESEEAPSYE 452


>sp|RL18_METS5|LARGE ribosomal subunit protein uL18|Metallosphaera sedula (strain ATCC

Query: 6 GPNYK 10
GPNYK
Sbjct: 4 GPNYK 8


>sp|KADA_METTL|ADENYLATE kinase|Methanothermococcus thermolithotrophicus

Query: 3 SESGPNYK 10
SE G NYK
Sbjct: 28 SEEGINYK 35


>sp|KADA_METMP|ADENYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 SESGPNYK 10
SE G NYK
Sbjct: 28 SEEGLNYK 35


>sp|KADA_METM6|ADENYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 3 SESGPNYK 10
SE G NYK
Sbjct: 28 SEEGLNYK 35


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 1 CESESGPNYK 10
CE +GP Y+
Sbjct: 125 CEEFTGPIYQ 134


>sp|KADA_METM7|ADENYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 3 SESGPNYK 10
SE G NYK
Sbjct: 28 SEEGLNYK 35


>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain Fusaro

Query: 1 CESESGPNYK 10
CE +GP Y+
Sbjct: 125 CEEFTGPIYQ 134


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 1 CESESGPNYK 10
CE +GP Y+
Sbjct: 125 CEEFTGPIYQ 134


>sp|TRPE_SACS2|ANTHRANILATE synthase component 1|Saccharolobus solfataricus (strain ATCC

Query: 1 CESESGPNYK 10
ES GP YK
Sbjct: 29 LESIGGPQYK 38


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CESESGPNYK 10
C++E G N K
Sbjct: 553 CKNEEGKNEK 562


>sp|RL18_SACI1|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 5 SGPNYK 10
+GPNYK
Sbjct: 3 NGPNYK 8


>sp|RL18_SACS2|LARGE ribosomal subunit protein uL18|Saccharolobus solfataricus (strain

Query: 5 SGPNYK 10
+GPNYK
Sbjct: 6 NGPNYK 11


>sp|RL18_SACI7|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 5 SGPNYK 10
+GPNYK
Sbjct: 3 NGPNYK 8


>sp|RL18_SACI6|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 5 SGPNYK 10
+GPNYK
Sbjct: 3 NGPNYK 8


>sp|RL18_SACI4|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 5 SGPNYK 10
+GPNYK
Sbjct: 3 NGPNYK 8


>sp|RL18_SACI3|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 5 SGPNYK 10
+GPNYK
Sbjct: 3 NGPNYK 8


>sp|RL18_SACI2|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 5 SGPNYK 10
+GPNYK
Sbjct: 3 NGPNYK 8




354|SequenceR|1775|1766|KFHGICESES

>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFHGICE 7
KFHG C+
Sbjct: 5 KFHGGCQ 11


>sp|RNP2_METTH|RIBONUCLEASE P protein component 2|Methanothermobacter thermautotrophicus

Query: 1 KFHGICESES 10
K HG CE+ +
Sbjct: 40 KLHGECETSN 49


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GICESE 9
GIC+SE
Sbjct: 356 GICQSE 361


>sp|NUCS_METKA|ENDONUCLEASE NucS|Methanopyrus kandleri (strain AV19 /

Query: 4 GICESE 9
GICE+E
Sbjct: 29 GICEAE 34


>sp|PDAD1_ARCFU|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KFHGICESE 9
++HG C E
Sbjct: 101 EYHGYCNGE 109




355|SequenceR|1780|1771|LSFILKFHGI

>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LSFILKFHG 9
FILK+HG
Sbjct: 60 FDFILKWHG 68


>sp|TRM56_PICTO|TRNA (cytidine(56)-2'-O)-methyltransferase|Picrophilus torridus

Query: 2 SFILKFHG 9
SF+ KFHG
Sbjct: 67 SFMKKFHG 74


>sp|Y202_METJA|UNCHARACTERIZED protein MJ0202|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FILKFHG 9
ILKFHG
Sbjct: 4 LILKFHG 10


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LSFILKFHG 9
FI+K+HG
Sbjct: 60 FDFIMKWHG 68


>sp|FUCA_METMP|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SFILKFHGI 10
S ILK HGI
Sbjct: 141 SIILKNHGI 149


>sp|FUCA_METM7|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain C7 /

Query: 2 SFILKFHGI 10
S ILK HGI
Sbjct: 141 SIILKNHGI 149


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 ILKFHG 9
+LKFHG
Sbjct: 3 LLKFHG 8


>sp|FUCA_METM5|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain C5 /

Query: 2 SFILKFHGI 10
S ILK HGI
Sbjct: 141 SIILKNHGI 149


>sp|TRUA_THEVO|TRNA pseudouridine synthase A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LSFILKFHG 9
L+FIL+F G
Sbjct: 176 LAFILEFRG 184


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 ILKFHG 9
I+KFHG
Sbjct: 131 IIKFHG 136


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 2 SFILKFHG 9
SFILKF G
Sbjct: 116 SFILKFLG 123


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LSFILKFHG 9
L ILK+HG
Sbjct: 60 LDAILKWHG 68




356|SequenceR|1785|1776|GHVRLLSFIL

>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HVRLLSFIL 10
H R LSF+L
Sbjct: 321 HTRCLSFML 329


>sp|COAD_METKA|PHOSPHOPANTETHEINE adenylyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GHVRLLSFIL 10
GH RLLS L
Sbjct: 22 GHQRLLSVAL 31


>sp|APT_METM7|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 GHVRLLSFIL 10
GHV L+F++
Sbjct: 139 GHVSALNFVI 148


>sp|Y101_ARCFU|UNCHARACTERIZED protein AF_0101|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GHVRLLSFI 9
GH+ + SFI
Sbjct: 93 GHITITSFI 101


>sp|APT_METMP|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 GHVRLLSFIL 10
GHV L+F++
Sbjct: 139 GHVSALNFVI 148


>sp|APT_METM5|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 GHVRLLSFIL 10
GHV L+F++
Sbjct: 139 GHVSALNFVI 148




357|SequenceR|1790|1781|QVQGAGHVRL

>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing]

Query: 4 GAGHVRL 10
G GHVRL
Sbjct: 47 GLGHVRL 53


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 263 VEGPGHVPL 271


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 263 VEGPGHVPL 271


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 263 VEGPGHVPL 271


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 259 VEGPGHVPL 267


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 259 VEGPGHVPL 267


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 259 VEGPGHVPL 267


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 260 VEGPGHVPL 268


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 263 VEGPGHVPL 271


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 263 VEGPGHVPL 271


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 263 VEGPGHVPL 271


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 263 VEGPGHVPL 271


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 263 VEGPGHVPL 271


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 263 VEGPGHVPL 271


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VQGAGHV 8
V GAGHV
Sbjct: 215 VVGAGHV 221


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 264 VEGPGHVPL 272


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VQGAGHVRL 10
V G GH+RL
Sbjct: 133 VGGTGHLRL 141


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 263 VEGPGHVPL 271


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 VQGAGHVRL 10
V+G GH+ L
Sbjct: 264 VEGPGHIPL 272


>sp|IF1A_ARCFU|TRANSLATION initiation factor 1A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GAGHVRL 10
GAGH+++
Sbjct: 29 GAGHIKV 35


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VQGAGHVRL 10
V+G GHV L
Sbjct: 263 VEGPGHVPL 271




358|SequenceR|1795|1786|ELALQQVQGA

>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus (Sulfolobus

Query: 1 ELALQQVQ 8
+LA+QQ+Q
Sbjct: 209 QLAMQQIQ 216




359|SequenceR|1800|1791|VINVVELALQ

>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 INVVELALQ 10
+N+VELALQ
Sbjct: 67 MNLVELALQ 75




360|SequenceR|1805|1796|DQNSTVINVV

>sp|TFE_METTP|TRANSCRIPTION factor E|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 QNSTVINVV 10
+NST++ V+
Sbjct: 146 ENSTIVEVI 154




361|SequenceR|1810|1801|INNVCDQNST

>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 5 CDQNST 10
CDQNST
Sbjct: 60 CDQNST 65


>sp|DAPA_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 INNVCDQN 8
IN +CD+N
Sbjct: 276 INEICDEN 283


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 5 CDQNST 10
CD+NST
Sbjct: 60 CDKNST 65


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 NNVCDQNS 9
NN+CD+ S
Sbjct: 523 NNLCDKIS 530




362|SequenceR|1815|1806|VMSEAINNVC

>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 EAINNVC 10
EA+NN C
Sbjct: 397 EALNNPC 403


>sp|RS7_PICTO|SMALL ribosomal subunit protein uS7|Picrophilus torridus (strain ATCC

Query: 2 MSEAINNVC 10
+ EA+ N+C
Sbjct: 130 LDEALRNIC 138




363|SequenceR|1820|1811|LLSSLVMSEA

***** No hits found ******


364|SequenceR|1825|1816|SHLLALLSSL

***** No hits found ******


365|SequenceR|1830|1821|RSSPLSHLLA

>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RSSPLSHLLA 10
R PL H LA
Sbjct: 329 REGPLGHALA 338


>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 2 SSPLSHLLA 10
+ PL H+LA
Sbjct: 135 TEPLEHMLA 143


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 RSSPLSHLL 9
RS+PL H++
Sbjct: 136 RSNPLIHII 144


>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 2 SSPLSHLL 9
S PL HLL
Sbjct: 400 SDPLMHLL 407




366|SequenceR|1835|1826|ELVLQRSSPL

***** No hits found ******


367|SequenceR|1840|1831|LAYLTELVLQ

>sp|SECE_ACIAM|PROTEIN translocase subunit SecE|Acidianus ambivalens (Desulfurolobus

Query: 1 LAYLTELVL 9
LAYL +LVL
Sbjct: 46 LAYLIQLVL 54




368|SequenceR|1845|1836|KTSSTLAYLT

>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KTSSTLAYL 9
KTS TLAY
Sbjct: 169 KTSDTLAYF 177




369|SequenceR|1850|1841|AEKIIKTSST

>sp|Y343_META3|UPF0280 protein Maeo_0343|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EKIIKTS 8
EKI+KTS
Sbjct: 234 EKIVKTS 240




370|SequenceR|1855|1846|AGKAMAEKII

>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 2 GKAMAEKII 10
GK MAEKI+
Sbjct: 2 GKTMAEKIL 10


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GKAMAEKI 9
GKA+AEK+
Sbjct: 89 GKAIAEKL 96


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AGKAMAEKI 9
AGK MAE I
Sbjct: 369 AGKRMAEAI 377


>sp|LEUC2_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 GKAMAEKII 10
GK +AEKI+
Sbjct: 2 GKTIAEKIL 10


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 AGKAMAEKII 10
AG+ AEKI+
Sbjct: 65 AGQVHAEKIV 74


>sp|KCY_DESA1|CYTIDYLATE kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 GKAMAEKII 10
GKA+AE +I
Sbjct: 119 GKALAETLI 127




371|SequenceR|1860|1851|LLYILAGKAM

>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 713 YVLGGRAM 720


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 703 YVLGGRAM 710


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 700 YVLGGRAM 707


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 701 YVLGGRAM 708


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 711 YVLGGRAM 718


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 700 YVLGGRAM 707


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 702 YVLGGRAM 709


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 712 YVLGGRAM 719


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 700 YVLGGRAM 707


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 711 YVLGGRAM 718


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 728 YVLGGRAM 735


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 35 YVLGGRAM 42


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 719 YVLGGRAM 726


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LLYILAGK 8
L Y+LAGK
Sbjct: 153 LAYVLAGK 160


>sp|KAD6_METMA|PUTATIVE adenylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YILAGK 8
YILAGK
Sbjct: 172 YILAGK 177


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 3 YILAGKAM 10
Y+L G+AM
Sbjct: 247 YVLGGRAM 254




372|SequenceR|1865|1856|NCFMDLLYIL

>sp|PURQ_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NCFMDLLYIL 10
NC MD+L++L
Sbjct: 12 NCDMDVLHVL 21


>sp|PURQ_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina acetivorans (strain ATCC

Query: 1 NCFMDLLYIL 10
NC MD+L++L
Sbjct: 12 NCDMDVLHVL 21


>sp|BACH_NATPH|HALORHODOPSIN pharaonis (Natronobacterium pharaonis)

Query: 2 CFMDLLYIL 10
CF+ +LYIL
Sbjct: 186 CFLVVLYIL 194


>sp|PURQ_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina barkeri (strain Fusaro /

Query: 1 NCFMDLLYIL 10
NC D+L++L
Sbjct: 12 NCDQDVLHVL 21


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 2 CFMDLLY 8
CF DL+Y
Sbjct: 175 CFCDLMY 181




373|SequenceR|1870|1861|QPHTSNCFMD

>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 3 HTSNCFMD 10
H SN F+D
Sbjct: 538 HNSNIFID 545




374|SequenceR|1875|1866|TQARVQPHTS

>sp|MCH_METAR|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocella arvoryzae (strain DSM 22066

Query: 4 RVQPHT 9
R++PHT
Sbjct: 23 RIEPHT 28




375|SequenceR|1880|1871|AFLEATQARV

>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AFLEATQARV 10
A +EA+QARV
Sbjct: 89 AVIEASQARV 98


>sp|MEND_HALLT|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 AFLEATQARV 10
A +EA++ARV
Sbjct: 89 AVMEASEARV 98


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AFLEATQARV 10
A +EA QAR+
Sbjct: 89 AVMEAAQARI 98


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 AFLEATQARV 10
A +EA QAR+
Sbjct: 89 AVMEAAQARI 98




376|SequenceR|1885|1876|DATMKAFLEA

>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DATMKAFLE 9
DA++K+FLE
Sbjct: 3 DASLKSFLE 11


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 DATMKAFLE 9
DAT +AFLE
Sbjct: 202 DATSEAFLE 210


>sp|TRM1_METJA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocaldococcus

Query: 1 DATMKAFLEA 10
DAT+K +EA
Sbjct: 357 DATLKNVIEA 366


>sp|RSMA_HALWD|PROBABLE ribosomal RNA small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DATMKAFL 8
DAT+ AFL
Sbjct: 95 DATLAAFL 102




377|SequenceR|1890|1881|PGILKDATMK

>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 PGILKDATMK 10
PG+LKDA ++
Sbjct: 233 PGMLKDAGLR 242


>sp|ARGB_METBU|ACETYLGLUTAMATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PGILKDAT 8
PG+L+D T
Sbjct: 222 PGVLRDQT 229


>sp|GYAR_AERPE|GLYOXYLATE reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGILKDAT 8
PG+L +AT
Sbjct: 98 PGVLTEAT 105


>sp|PUR5_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PGILKD 6
PGI+KD
Sbjct: 138 PGIIKD 143




378|SequenceR|1895|1886|TIRVKPGILK

>sp|RS3_METTH|SMALL ribosomal subunit protein uS3|Methanothermobacter

Query: 1 TIRVKPGIL 9
T+++KPG+L
Sbjct: 167 TVQLKPGVL 175


>sp|CBIM2_METLZ|PUTATIVE cobalt transport protein CbiM|Methanocorpusculum labreanum (strain

Query: 2 IRVKPGILK 10
+RVKP ILK
Sbjct: 205 VRVKPEILK 213


>sp|RS3_METST|SMALL ribosomal subunit protein uS3|Methanosphaera stadtmanae (strain

Query: 1 TIRVKPGIL 9
T+++KPG+L
Sbjct: 167 TVQLKPGVL 175


>sp|RS3_METS3|SMALL ribosomal subunit protein uS3|Methanobrevibacter smithii (strain

Query: 1 TIRVKPGIL 9
T+++KPG+L
Sbjct: 167 TVQLKPGVL 175


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 3 RVKPGI 8
RVKPGI
Sbjct: 236 RVKPGI 241


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 4 VKPGILK 10
VKPG++K
Sbjct: 36 VKPGVIK 42


>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 TIRVKPGI 8
T+RV PGI
Sbjct: 273 TLRVLPGI 280


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TIRVKP 6
TIRVKP
Sbjct: 297 TIRVKP 302


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 2 IRVKPGILK 10
+ KPGILK
Sbjct: 3 VNSKPGILK 11


>sp|CAS6_PYRFU|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RVKPGILK 10
R+KPGI +
Sbjct: 193 RIKPGIYQ 200


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 IRVKPGI 8
++VKPG+
Sbjct: 410 VKVKPGV 416


>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TIRVKPGI 8
TI++KP I
Sbjct: 266 TIKIKPAI 273


>sp|HYPB_METJA|PROBABLE hydrogenase maturation factor HypB|Methanocaldococcus jannaschii

Query: 1 TIRVKPGILK 10
TI PGI+K
Sbjct: 150 TIEKHPGIMK 159




379|SequenceR|1900|1891|LFKMLTIRVK

***** No hits found ******


380|SequenceR|1905|1896|MFVSPLFKML

>sp|GVPG1_HALSA|GAS vesicle protein G1|Halobacterium salinarum (strain ATCC 700922

Query: 1 MFVSPLFKML 10
+FVSP F +L
Sbjct: 7 LFVSPFFSLL 16




381|SequenceR|1910|1901|DRMADMFVSP

>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RMADMFVSP 10
RM D+FV P
Sbjct: 331 RMVDVFVIP 339


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 2 RMADMFVSP 10
R+AD++++P
Sbjct: 501 RVADLYINP 509


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 2 RMADMFVSP 10
R+AD++++P
Sbjct: 501 RVADLYINP 509


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RMADMFVSP 10
R+AD++++P
Sbjct: 494 RVADLYINP 502


>sp|FEN_HALMA|FLAP endonuclease 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 DRMADMFVSP 10
DR+ D+F+ P
Sbjct: 263 DRIRDLFLDP 272


>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 3 MADMFVSP 10
MAD F SP
Sbjct: 123 MADYFTSP 130




382|SequenceR|1915|1906|AAEPNDRMAD

>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 AEPNDRMA 9
AEP DR+A
Sbjct: 385 AEPGDRVA 392


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 AEPNDRMA 9
AEP DR+A
Sbjct: 385 AEPGDRVA 392


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 AAEPNDRMA 9
AA+P+DR+A
Sbjct: 201 AADPHDRLA 209


Query: 1 AAEPNDRMAD 10
AAE DR AD
Sbjct: 539 AAEKRDRAAD 548


>sp|FLPA_HALLT|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halorubrum lacusprofundi (strain

Query: 1 AAEPNDRM 8
AAEP DR+
Sbjct: 102 AAEPRDRL 109


>sp|FTSZ1_HALVD|CELL division protein FtsZ 1|Haloferax volcanii (strain ATCC 29605

Query: 4 PNDRMAD 10
PNDR+ D
Sbjct: 203 PNDRLLD 209


>sp|FTSZ_HALMT|CELL division protein FtsZ|Haloferax mediterranei (strain ATCC 33500

Query: 4 PNDRMAD 10
PNDR+ D
Sbjct: 201 PNDRLLD 207


>sp|COFC_HALTV|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 AAEPNDRMAD 10
A EP R+AD
Sbjct: 9 ATEPKTRLAD 18


>sp|FTSZ1_HALSA|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC 700922

Query: 4 PNDRMAD 10
PNDR+ D
Sbjct: 205 PNDRLLD 211


>sp|FTSZ1_HALS3|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC 29341

Query: 4 PNDRMAD 10
PNDR+ D
Sbjct: 205 PNDRLLD 211


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 PNDRMAD 10
P+DRM D
Sbjct: 61 PDDRMTD 67




383|SequenceR|1920|1911|EFIHVAAEPN

>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 HVAAEPN 10
HVAA PN
Sbjct: 431 HVAAMPN 437


>sp|ARADH_HALVD|L-ARABINOSE 1-dehydrogenase (NAD(P)(+))|Haloferax volcanii (strain ATCC 29605

Query: 3 IHVAAEPN 10
+H+AA PN
Sbjct: 62 VHLAANPN 69


>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EFIHVAAEPN 10
E++H + PN
Sbjct: 123 EYVHFSTGPN 132


>sp|RL21_METJA|LARGE ribosomal subunit protein eL21|Methanocaldococcus jannaschii

Query: 1 EFIHVAAEPN 10
E++H+ +P+
Sbjct: 39 EYVHIVIDPS 48




384|SequenceR|1925|1916|NEHTGEFIHV

>sp|DAPAL_THEPD|UNCHARACTERIZED DapA-like lyase Tpen_1666|Thermofilum pendens (strain DSM 2475

Query: 1 NEHTGEFIHV 10
N TGEF+H+
Sbjct: 45 NSTTGEFVHL 54


>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 NEHTGEFI 8
NE TGEF+
Sbjct: 307 NEETGEFL 314


>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 NEHTGEFI 8
NE+TGEF+
Sbjct: 307 NENTGEFL 314


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 3 HTGEFIH 9
H GEF+H
Sbjct: 232 HAGEFLH 238


>sp|ARLY_PYRNV|ARGININOSUCCINATE lyase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 NEHTGEFIHV 10
+E GEF+HV
Sbjct: 167 DELAGEFLHV 176


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 EHTGEFIH 9
+H GE++H
Sbjct: 35 QHVGEYLH 42


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 NEHTGEFIHV 10
NE G+F+H+
Sbjct: 251 NEKVGKFLHL 260


>sp|TF2B_IGNH4|TRANSCRIPTION initiation factor IIB|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 22 NEETGEYV 29


>sp|DNLI_THEFM|DNA ligase|Thermococcus fumicolans

Query: 1 NEHTGEFIHV 10
++H GEF+ V
Sbjct: 455 DQHRGEFVPV 464


>sp|FEN_METKA|FLAP endonuclease 1|Methanopyrus kandleri (strain AV19 /

Query: 3 HTGEFIHV 10
HTGE I V
Sbjct: 195 HTGEIIEV 202


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 432 NEETGEYL 439


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 432 NEETGEYL 439


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 430 NEETGEYL 437


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 431 NEETGEYL 438


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 431 NEETGEYL 438


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 431 NEETGEYL 438


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 431 NEETGEYL 438


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 431 NEETGEYL 438


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 431 NEETGEYL 438


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 431 NEETGEYL 438


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 431 NEETGEYL 438


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 428 NEETGEYL 435


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 430 NEETGEYL 437


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 NEHTGEFI 8
NE TGE++
Sbjct: 430 NEETGEYL 437


>sp|TRPD_SACS2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 NEHTGEFIHV 10
+EH EFI +
Sbjct: 281 DEHVAEFIKI 290


>sp|TRPD_SACI7|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 NEHTGEFIHV 10
+EH EFI +
Sbjct: 281 DEHVAEFIKI 290


>sp|TRPD_SACI6|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NEHTGEFIHV 10
+EH EFI +
Sbjct: 281 DEHVAEFIKI 290


>sp|TRPD_SACI4|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 NEHTGEFIHV 10
+EH EFI +
Sbjct: 281 DEHVAEFIKI 290


>sp|TRPD_SACI3|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 NEHTGEFIHV 10
+EH EFI +
Sbjct: 281 DEHVAEFIKI 290


>sp|TRPD_SACI2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 NEHTGEFIHV 10
+EH EFI +
Sbjct: 281 DEHVAEFIKI 290


>sp|RNH2_METBF|RIBONUCLEASE HII|Methanosarcina barkeri (strain Fusaro /

Query: 2 EHTGEF 7
EH+GEF
Sbjct: 194 EHSGEF 199


>sp|TRPD_SACI1|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 NEHTGEFIHV 10
+EH EFI +
Sbjct: 281 DEHVAEFIKI 290


>sp|DNLI_THEON|DNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 NEHTGEFIHV 10
+ H+GEF+ V
Sbjct: 458 DPHSGEFVPV 467


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 NEHTGE 6
N+HTGE
Sbjct: 460 NQHTGE 465


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 EHTGEFIH 9
+H GE++H
Sbjct: 35 QHVGEYLH 42


>sp|RRP42_THEGJ|EXOSOME complex component Rrp42|Thermococcus gammatolerans (strain DSM

Query: 1 NEHTGEFIHV 10
NE TGE I +
Sbjct: 172 NEETGEIIKL 181


>sp|DNLI_THEKO|DNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NEHTGEFIHV 10
+ H+GEF+ V
Sbjct: 455 DPHSGEFLPV 464


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain ATCC

Query: 2 EHTGEFI 8
EHT EF+
Sbjct: 413 EHTAEFV 419


>sp|APGM_PYRIL|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 EHTGEFIHV 10
EHTGE + +
Sbjct: 354 EHTGESVPI 362


>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 EHTGEFIHV 10
EHTGE + V
Sbjct: 354 EHTGEPVPV 362


>sp|OGT_PYRFU|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NEHTGEFIHV 10
NE EFI V
Sbjct: 80 NEEAAEFIEV 89


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EHTGEFIHV 10
+ TGE +H+
Sbjct: 546 DETGEVLHI 554


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NEHTGE 6
N HTGE
Sbjct: 460 NSHTGE 465


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 2 EHTGEFIHV 10
EH GE+ V
Sbjct: 775 EHPGEYFEV 783


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 HTGEFIH 9
H GE IH
Sbjct: 447 HEGEIIH 453




385|SequenceR|1930|1921|WILEPNEHTG

>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WILEPNEH 8
+I+EPNE+
Sbjct: 231 YIIEPNEN 238


>sp|Y2093_ARCFU|UNCHARACTERIZED protein AF_2093|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WILEPNEHT 9
W++ P+E T
Sbjct: 199 WVVNPDEKT 207


>sp|DCD_ACIAM|DCTP deaminase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 WILEPNEH 8
+I+ PNEH
Sbjct: 68 FIIYPNEH 75


>sp|GATB_METHJ|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 4 EPNEHT 9
EPN HT
Sbjct: 34 EPNTHT 39


>sp|KTHY_METST|PROBABLE thymidylate kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 WILEPNEHT 9
WI + N+HT
Sbjct: 112 WIYKINKHT 120


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 4 EPNEHT 9
EPN HT
Sbjct: 41 EPNTHT 46


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 ILEPNE 7
+LEPNE
Sbjct: 318 VLEPNE 323


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 WILEPNEHTG 10
W EP +H G
Sbjct: 165 WAFEPLDHPG 174


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 5 PNEHTG 10
PNEH G
Sbjct: 634 PNEHMG 639


>sp|Y1132_METJA|UPF0058 protein MJ1132|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILEPNEHTG 10
ILE NE+ G
Sbjct: 103 ILEENENNG 111




386|SequenceR|1935|1926|RSNDNWILEP

>sp|NADK_HALMA|NAD kinase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SNDNWILEP 10
S DNW L P
Sbjct: 135 SGDNWELSP 143


>sp|Y420_METJA|UNCHARACTERIZED protein MJ0420|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SNDNWILEP 10
SN NW L P
Sbjct: 239 SNQNWDLNP 247


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NDNWILEP 10
+D W LEP
Sbjct: 144 DDKWTLEP 151


>sp|MPTN_METMP|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RSNDNWI 7
R++DNWI
Sbjct: 204 RTSDNWI 210


>sp|ENDA_THEAC|TRNA-SPLICING endonuclease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SNDNWILEP 10
S DN IL+P
Sbjct: 32 SGDNLILDP 40


>sp|Y1147_METJA|UNCHARACTERIZED protein MJ1147|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 WILEP 10
WILEP
Sbjct: 434 WILEP 438


>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 RSNDNWIL 8
R ND WI
Sbjct: 552 RENDKWIF 559


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SNDNWILE 9
S NWILE
Sbjct: 178 SKVNWILE 185


>sp|DGGGP_SACS2|DIGERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 NDNWIL 8
+DNW+L
Sbjct: 152 SDNWLL 157


>sp|NEP1_PYRAR|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum arsenaticum (strain

Query: 3 NDNWILE 9
N+ W+LE
Sbjct: 182 NNKWVLE 188


>sp|RL15E_DESA1|LARGE ribosomal subunit protein eL15|Desulfurococcus amylolyticus (strain

Query: 5 NWILEP 10
NWI EP
Sbjct: 148 NWICEP 153


>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RSNDNWIL 8
+ ND W+L
Sbjct: 304 KENDEWVL 311


>sp|THIL_PYRHO|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RSNDNWIL 8
R ND+W+L
Sbjct: 30 RFNDSWLL 37


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 NDNWILEP 10
++ WI+EP
Sbjct: 502 DERWIIEP 509


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 NDNWILE 9
++NWI+E
Sbjct: 526 DENWIIE 532


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 NDNWILE 9
++NWI+E
Sbjct: 526 DENWIIE 532


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 NWILE 9
NWILE
Sbjct: 433 NWILE 437




387|SequenceR|1940|1931|TSVKDRSNDN

>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 3 VKDRSNDN 10
+KDRSND+
Sbjct: 346 LKDRSNDS 353


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 VKDRSNDN 10
VKD+ +DN
Sbjct: 132 VKDKQSDN 139




388|SequenceR|1945|1936|MERVTTSVKD

>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 1 MERVTTSVKD 10
ME++ T+VKD
Sbjct: 222 MEKMGTTVKD 231


>sp|DNAK_THEAC|CHAPERONE protein DnaK|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ERVTTSVKD 10
ER+T VKD
Sbjct: 539 ERLTNEVKD 547




389|SequenceR|1950|1941|FHELMMERVT

>sp|COFD_METTH|2-PHOSPHO-L-LACTATE transferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FHELMMER 8
FHE ++ER
Sbjct: 152 FHEFLVER 159


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 FHELMMERV 9
F EL +ERV
Sbjct: 620 FEELTLERV 628


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 HELMMERVT 10
H+L++ER++
Sbjct: 363 HDLLVERIS 371




390|SequenceR|1955|1946|DQQNKFHELM

>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 2 QQNKFHEL 9
QQN FHE+
Sbjct: 501 QQNAFHEI 508


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 QQNKFHEL 9
QQN FHE+
Sbjct: 506 QQNAFHEV 513


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 2 QQNKFHEL 9
QQN +HE+
Sbjct: 503 QQNAYHEV 510


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 2 QQNKFHEL 9
QQN +HE+
Sbjct: 497 QQNAYHEV 504


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QQNKFHELM 10
Q+N+F +LM
Sbjct: 88 QENRFRQLM 96


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 2 QQNKFHEL 9
QQN FH++
Sbjct: 506 QQNAFHDV 513


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QQNKFHELM 10
Q+N+F +LM
Sbjct: 88 QENRFRQLM 96


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 2 QQNKFHEL 9
QQ+ FHE+
Sbjct: 501 QQDAFHEV 508


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 QQNKFHEL 9
QQN FH++
Sbjct: 505 QQNAFHDV 512


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QQNKFHELM 10
Q+N+F +LM
Sbjct: 88 QENQFRQLM 96


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QQNKFHEL 9
QQN FH +
Sbjct: 496 QQNAFHPI 503


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 2 QQNKFHEL 9
QQN FH +
Sbjct: 496 QQNAFHPI 503


>sp|TF2B6_HALSA|TRANSCRIPTION initiation factor IIB 6|Halobacterium salinarum (strain ATCC 700922

Query: 3 QNKFHELM 10
+N++HEL+
Sbjct: 304 RNRYHELL 311


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DQQNKFHELM 10
D ++K HE+M
Sbjct: 92 DYKSKIHEIM 101


>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DQQNKFHEL 9
D+ KFHE+
Sbjct: 158 DELKKFHEI 166


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DQQNKF 6
D+QNKF
Sbjct: 612 DEQNKF 617


>sp|Y940_METJA|TPR repeat-containing protein MJ0940|Methanocaldococcus jannaschii

Query: 1 DQQNKFHELM 10
++QNKF E +
Sbjct: 266 EKQNKFEEAL 275




391|SequenceR|1960|1951|NAEPNDQQNK

>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NAEPNDQ 7
N EPNDQ
Sbjct: 202 NPEPNDQ 208


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 NAEPNDQ 7
N EPNDQ
Sbjct: 202 NPEPNDQ 208


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NAEPNDQ 7
N EPND+
Sbjct: 202 NPEPNDE 208




392|SequenceR|1965|1956|EPLKWNAEPN

>sp|CARA_SULAC|CARBAMOYL phosphate synthase small chain|Sulfolobus acidocaldarius (strain

Query: 1 EPLKWNAE 8
EP KWN++
Sbjct: 100 EPFKWNSK 107


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 EPLKWN 6
EPLKW+
Sbjct: 215 EPLKWS 220


>sp|NUCS_METKA|ENDONUCLEASE NucS|Methanopyrus kandleri (strain AV19 /

Query: 1 EPLKWNAEPN 10
EP WN P+
Sbjct: 68 EPTNWNPAPS 77


>sp|GPT_SULAC|PUTATIVE UDP-N-acetylglucosamine--dolichyl-phosphate

Query: 3 LKWNAEPN 10
L W+++PN
Sbjct: 279 LHWDSKPN 286


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 4 KWNAEP 9
KWN EP
Sbjct: 513 KWNIEP 518


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus jannaschii

Query: 1 EPLKWN 6
EP++WN
Sbjct: 146 EPIEWN 151


>sp|GCH1_PYRNV|GTP cyclohydrolase 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PLKWNAEP 9
PL+++AEP
Sbjct: 60 PLEYDAEP 67


>sp|GPDA_METTH|GLYCEROL-3-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 3 LKWNAE 8
L WNAE
Sbjct: 19 LSWNAE 24


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 EPLKWNA 7
+P KWN+
Sbjct: 101 DPFKWNS 107


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 1 EPLKWNAE 8
EP+KW E
Sbjct: 417 EPIKWIGE 424


>sp|Y1698_ARCFU|UPF0098 protein AF_1698|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LKWNAEP 9
+ WN EP
Sbjct: 196 IAWNVEP 202




393|SequenceR|1970|1961|VVAFDEPLKW

>sp|DCDB_METJA|DCTP deaminase, dUMP-forming|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VVAFDEPL 8
+VAFD+P+
Sbjct: 146 IVAFDKPV 153


>sp|K1PF_HALVD|1-PHOSPHOFRUCTOKINASE volcanii (strain ATCC 29605

Query: 2 VAFDEPLK 9
+ FDEPL+
Sbjct: 15 IHFDEPLQ 22


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 EPLKW 10
EPLKW
Sbjct: 365 EPLKW 369


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 4 FDEPLKW 10
FDE LKW
Sbjct: 444 FDEYLKW 450


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 FDEPLKW 10
DEPL W
Sbjct: 296 LDEPLVW 302


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 4 FDEPLKW 10
FDE +KW
Sbjct: 443 FDEYIKW 449


>sp|PSTB_ARCFU|PHOSPHATE import ATP-binding protein PstB|Archaeoglobus fulgidus (strain ATCC

Query: 1 VVAFDEP 7
V+ FDEP
Sbjct: 168 VILFDEP 174


>sp|KTHY_METS3|PROBABLE thymidylate kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 VAFDEPLKW 10
+A+ EP +W
Sbjct: 96 LAYQEPAEW 104


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 VAFDEPLKW 10
VA DE + W
Sbjct: 82 VALDEMINW 90


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 FDEPLKW 10
F EP++W
Sbjct: 584 FGEPVRW 590


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 1 VVAFDEP 7
+V FDEP
Sbjct: 159 IVIFDEP 165


>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum (strain

Query: 4 FDEPLKW 10
FDE +KW
Sbjct: 443 FDEYIKW 449


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 4 FDEPLKW 10
FDE +KW
Sbjct: 444 FDEYIKW 450




394|SequenceR|1975|1966|EAEGFVVAFD

>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AEGFVVAFD 10
A+G+V+ FD
Sbjct: 420 ADGYVIEFD 428


>sp|CARA_PYRFU|CARBAMOYL phosphate synthase small chain|Pyrococcus furiosus (strain ATCC

Query: 1 EAEGFVVAF 9
+ EGFV++F
Sbjct: 87 KVEGFVISF 95


>sp|RNH2_PYRHO|RIBONUCLEASE HII|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EAEGFVVAFD 10
EAE FVVA +
Sbjct: 84 EAEKFVVALN 93


>sp|AATC_THEAC|A-TYPE ATP synthase subunit C|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EAEGFVVAF 9
EAE F+V+F
Sbjct: 117 EAEPFLVSF 125


>sp|CAS5_THETK|CRISPR-ASSOCIATED protein Cas5|Thermoproteus tenax (strain ATCC 35583

Query: 1 EAEGFVVA 8
EAEG VVA
Sbjct: 57 EAEGLVVA 64


>sp|ACTH_THEVO|ARCHAEAL actin homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GFVVAFD 10
GFVV FD
Sbjct: 222 GFVVPFD 228


>sp|ACTH_THEAC|ARCHAEAL actin homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GFVVAFD 10
GFVV FD
Sbjct: 222 GFVVPFD 228


>sp|Y1348_ARCFU|UNCHARACTERIZED protein AF_1348|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AEGFVVAFD 10
AEGFVV D
Sbjct: 61 AEGFVVEKD 69


>sp|CARA_METJA|CARBAMOYL phosphate synthase small chain|Methanocaldococcus jannaschii

Query: 1 EAEGFVV 7
+AEGFVV
Sbjct: 74 KAEGFVV 80


>sp|CARA_METM6|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain

Query: 1 EAEGFVV 7
+AEGFVV
Sbjct: 74 KAEGFVV 80


>sp|CARA_METM7|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain

Query: 1 EAEGFVV 7
+AEGFVV
Sbjct: 74 KAEGFVV 80


>sp|CARA_METMP|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain

Query: 1 EAEGFVV 7
+AEGFVV
Sbjct: 74 KAEGFVV 80


>sp|CARA_METM5|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain

Query: 1 EAEGFVV 7
+AEGFVV
Sbjct: 74 KAEGFVV 80


>sp|FTRL_METTM|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter marburgensis

Query: 1 EAEGFVVAFD 10
E EG V FD
Sbjct: 190 EVEGVVTPFD 199


>sp|FTRL_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter

Query: 1 EAEGFVVAFD 10
E EG V FD
Sbjct: 190 EVEGVVTPFD 199




395|SequenceR|1980|1971|VALEGEAEGF

>sp|MDH_METST|MALATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LEGEAEG 9
LEGE EG
Sbjct: 257 LEGEVEG 263


>sp|RDFA_HALVD|ROD-DETERMINING factor A|Haloferax volcanii (strain ATCC 29605

Query: 3 LEGEAEGF 10
L+GEAE F
Sbjct: 72 LDGEAENF 79


>sp|RFCS_METTH|REPLICATION factor C small subunit|Methanothermobacter thermautotrophicus

Query: 1 VALEGEAEG 9
+A+EGE +G
Sbjct: 275 LAMEGEVDG 283




396|SequenceR|1985|1976|LFVGGVALEG

>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FVGGVALEG 10
FVGGV+++G
Sbjct: 414 FVGGVSVKG 422


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFVGGVA 7
+FVGGVA
Sbjct: 253 VFVGGVA 259


>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 1 LFVGGVAL 8
L+VGGV L
Sbjct: 230 LYVGGVKL 237


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FVGGVALE 9
+ GG+ALE
Sbjct: 376 YCGGIALE 383


>sp|DGGGP_METMJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LFVGGVAL 8
LFVGG+A+
Sbjct: 89 LFVGGIAI 96




397|SequenceR|1990|1981|AIFIRLFVGG

>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IFIRLFVGG 10
IFI+LF+GG
Sbjct: 157 IFIQLFIGG 165


>sp|HIS6_HALWD|IMIDAZOLE glycerol phosphate synthase subunit|Haloquadratum walsbyi (strain

Query: 2 IFIRLFVGG 10
IFI L VGG
Sbjct: 78 IFIPLTVGG 86


>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AIFIRLFVGG 10
A+ +RL GG
Sbjct: 295 ALLVRLIAGG 304


>sp|RNZ_PYRFU|RIBONUCLEASE Z|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FIRLFVGG 10
F R+FVGG
Sbjct: 291 FDRVFVGG 298


>sp|CBIT_SACS2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 FIRLFVGG 10
F R+F+GG
Sbjct: 112 FDRIFIGG 119


>sp|CBIT_SACI7|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 FIRLFVGG 10
F R+F+GG
Sbjct: 112 FDRIFIGG 119


>sp|CBIT_SACI6|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 FIRLFVGG 10
F R+F+GG
Sbjct: 112 FDRIFIGG 119


>sp|CBIT_SACI4|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 FIRLFVGG 10
F R+F+GG
Sbjct: 112 FDRIFIGG 119


>sp|CBIT_SACI3|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 FIRLFVGG 10
F R+F+GG
Sbjct: 112 FDRIFIGG 119


>sp|CBIT_SACI2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 FIRLFVGG 10
F R+F+GG
Sbjct: 112 FDRIFIGG 119




398|SequenceR|1995|1986|VWAPQAIFIR

>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 VWAPQAIFI 9
VWAP A+ +
Sbjct: 136 VWAPSALSV 144


>sp|GLCD1_HALTV|GLUCOSE 1-dehydrogenase 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 WAPQAIFI 9
W P+++F+
Sbjct: 172 WRPESVFV 179


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 VWAPQAIFI 9
+++P AIF+
Sbjct: 138 IYSPSAIFV 146


>sp|EHAA_METTM|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex

Query: 2 WAPQAIF 8
W P AIF
Sbjct: 39 WTPSAIF 45


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 WAPQAIFIR 10
W P+ +F+R
Sbjct: 376 WYPEDMFLR 384


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WAPQAIFIR 10
W P+ +F+R
Sbjct: 376 WYPEDMFLR 384


>sp|EHAA_METTH|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex

Query: 2 WAPQAIF 8
W P AIF
Sbjct: 39 WTPSAIF 45


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WAPQAIFIR 10
W P+ +F+R
Sbjct: 376 WYPEDMFLR 384




399|SequenceR|2000|1991|RPKRLVWAPQ

>sp|PURA1_METAC|ADENYLOSUCCINATE synthetase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RPKRLVW 7
RP+RL W
Sbjct: 304 RPRRLGW 310


>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PKRLVWA 8
P+R++W+
Sbjct: 19 PRRIIWS 25


>sp|RL24E_METBU|LARGE ribosomal subunit protein eL24|Methanococcoides burtonii (strain

Query: 2 PKRLVWAPQ 10
P+R VW Q
Sbjct: 46 PRRTVWTEQ 54


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 1 RPKRLVWAPQ 10
R KR+ W P+
Sbjct: 246 RVKRVEWTPE 255


>sp|OTC_SULAC|ORNITHINE carbamoyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RPKRLVW 7
RPK+ VW
Sbjct: 187 RPKQEVW 193


>sp|GUAAA_METAR|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocella arvoryzae

Query: 2 PKRLVWA 8
PK +VWA
Sbjct: 119 PKTVVWA 125


>sp|RL3_METVS|LARGE ribosomal subunit protein uL3|Methanococcus vannielii (strain ATCC

Query: 1 RPKRLVWA 8
RPKR++W
Sbjct: 238 RPKRVMWT 245


>sp|RL3_METVA|LARGE ribosomal subunit protein uL3|Methanococcus vannielii

Query: 1 RPKRLVWA 8
RPKR++W
Sbjct: 238 RPKRVMWT 245


>sp|MTNA_PYRAB|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus abyssi (strain

Query: 3 KRLVWAP 9
KR+VW P
Sbjct: 338 KRVVWPP 344


>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RPKRLVWAPQ 10
+PK ++AP+
Sbjct: 54 KPKATIYAPE 63


>sp|PUS10_KORCO|TRNA pseudouridine synthase Pus10|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PKRLVW 7
PKR++W
Sbjct: 296 PKRVLW 301




400|SequenceR|2005|1996|AILFERPKRL

>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AILFERPK 8
A+LFERPK
Sbjct: 46 ALLFERPK 53


>sp|OTC_METJA|ORNITHINE carbamoyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AILFERP 7
AILFE+P
Sbjct: 41 AILFEKP 47


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LFERPKRL 10
L+ER KRL
Sbjct: 19 LYERAKRL 26


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 AILFERP 7
A+LFE+P
Sbjct: 47 ALLFEKP 53


>sp|OTC_IGNH4|ORNITHINE carbamoyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AILFERP 7
A+LFE+P
Sbjct: 49 ALLFEKP 55




401|SequenceR|2010|2001|LKELLAILFE

>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 1 LKELLAILFE 10
LK+++ ILFE
Sbjct: 136 LKDIVDILFE 145




402|SequenceR|2015|2006|ELLETLKELL

>sp|PYRE_PYRCJ|OROTATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 ELLETLK 7
ELLETLK
Sbjct: 166 ELLETLK 172


>sp|MFNB_ARCFU|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LETLKEL 9
+ETLKEL
Sbjct: 195 IETLKEL 201


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ELLETLKELL 10
+LLE+++E+L
Sbjct: 248 KLLESIREIL 257


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LLETLKELL 10
L+ETLK+L+
Sbjct: 1011 LVETLKDLI 1019


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LLETLKELL 10
L+ETLK+L+
Sbjct: 1011 LVETLKDLI 1019


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 1 ELLETLKELL 10
ELL+ L+EL+
Sbjct: 581 ELLQALQELI 590




403|SequenceR|2020|2011|HPNNKELLET

>sp|DPHB_METMJ|DIPHTHINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HPNNKELLET 10
HP +E LET
Sbjct: 237 HPMEREYLET 246


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii

Query: 1 HPNNKELLE 9
HP+N E+L+
Sbjct: 51 HPSNSEILQ 59


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 HPNNKELLE 9
HP+N E+L+
Sbjct: 45 HPSNSEILK 53


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HPNNKELLE 9
+P NKEL E
Sbjct: 566 YPRNKELFE 574


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 HPNNKELLE 9
+P NKEL E
Sbjct: 566 YPRNKELFE 574


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HPNNKELLE 9
+P NKEL E
Sbjct: 566 YPRNKELFE 574


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HPNNKELLE 9
+P NKEL E
Sbjct: 566 YPRNKELFE 574


>sp|Y084_METJA|UNCHARACTERIZED ATP-binding protein MJ0084|Methanocaldococcus jannaschii (strain

Query: 2 PNNKELLE 9
PNNKE+++
Sbjct: 218 PNNKEIMK 225


>sp|MER_METTM|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 HPNNKELLET 10
H NNK + ET
Sbjct: 36 HYNNKNVYET 45


>sp|MER_METTH|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 HPNNKELLET 10
H NNK + ET
Sbjct: 36 HYNNKNVYET 45


>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PNNKELLET 10
PN K L+ET
Sbjct: 203 PNEKNLVET 211


>sp|Y088_METJA|UNCHARACTERIZED protein MJ0088|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NNKELLE 9
NNKELLE
Sbjct: 49 NNKELLE 55


>sp|FTSZ1_METJA|CELL division protein FtsZ 1|Methanocaldococcus jannaschii (strain

Query: 2 PNNKELLE 9
P +KELLE
Sbjct: 24 PEDKELLE 31


>sp|Y3181_METBF|UPF0210 protein Mbar_A3181|Methanosarcina barkeri (strain Fusaro /

Query: 3 NNKELLET 10
N KE+LET
Sbjct: 4 NPKEILET 11


>sp|Y081_METMA|UPF0210 protein MM_0081|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NNKELLET 10
N KE+LET
Sbjct: 4 NPKEILET 11


>sp|DTDA_THEKO|D-AMINOACYL-TRNA deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HPNNKELL 8
HP +KELL
Sbjct: 222 HPLSKELL 229


>sp|THSG_SACSH|CHAPERONIN subunit gamma|Saccharolobus shibatae (strain ATCC 51178

Query: 1 HPNNKELLET 10
HP K L+ET
Sbjct: 68 HPTAKLLIET 77


>sp|THSG_SACS2|CHAPERONIN subunit gamma|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HPNNKELLET 10
HP K L+ET
Sbjct: 68 HPTAKLLIET 77


>sp|CDC45_SACS2|CELL division control protein 45|Saccharolobus solfataricus (strain

Query: 2 PNNKELLE 9
PNN+E+ E
Sbjct: 18 PNNQEIRE 25




404|SequenceR|2025|2016|ELTEGHPNNK

>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LTEGHPNN 9
LT GHPN+
Sbjct: 159 LTHGHPNS 166


>sp|IMDH_HALSA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 3 TEGHPNN 9
TEGHP++
Sbjct: 478 TEGHPHD 484


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LTEGHPNNK 10
L+EGH N+K
Sbjct: 1291 LSEGHWNDK 1299


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 2 LTEGHPNN 9
+ EG PNN
Sbjct: 16 IIEGEPNN 23


>sp|DAPB_NATPD|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ELTEGHPNNK 10
ELTE H N K
Sbjct: 135 ELTETHHNGK 144


>sp|THIM_NATPD|HYDROXYETHYLTHIAZOLE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ELTEGHP 7
E+T GHP
Sbjct: 185 EITAGHP 191


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 5 GHPNNK 10
GHP NK
Sbjct: 151 GHPTNK 156


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 GHPNN 9
GHPNN
Sbjct: 314 GHPNN 318


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 ELTEGHPNN 9
+LT GHP +
Sbjct: 125 QLTAGHPTS 133


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 TEGHPN 8
TEGHP
Sbjct: 119 TEGHPK 124


>sp|F16A2_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 LTEGHPNNK 10
+T G+PN K
Sbjct: 214 VTSGYPNGK 222


>sp|HIS4_METTL|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermococcus

Query: 1 ELTEGHPNNK 10
+L +G PN K
Sbjct: 16 QLIQGDPNKK 25


>sp|HIS4_METJA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocaldococcus jannaschii

Query: 1 ELTEGHPNNK 10
+L +G PN K
Sbjct: 16 QLIQGDPNKK 25


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 LTEGHPNN 9
L+ GHP N
Sbjct: 125 LSHGHPAN 132


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LTEGHPNN 9
L+ GHP N
Sbjct: 125 LSHGHPAN 132




405|SequenceR|2030|2021|AMTLTELTEG

>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TLTELTEG 10
+LT+LTEG
Sbjct: 111 SLTDLTEG 118




406|SequenceR|2035|2026|FLCVTAMTLT

***** No hits found ******


407|SequenceR|2040|2031|QPQASFLCVT

>sp|CDPAS_METMJ|CDP-ARCHAEOL synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PQASFLCVT 10
PQ +FL VT
Sbjct: 69 PQQTFLSVT 77


>sp|ARGC_METTP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QPQASFLCVT 10
P A+ +CVT
Sbjct: 24 HPSANVVCVT 33




408|SequenceR|2045|2036|VQDALQPQAS

>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 3 DALQPQ 8
DALQPQ
Sbjct: 400 DALQPQ 405




409|SequenceR|2050|2041|HGLPPVQDAL

>sp|CAS6_HALVD|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax volcanii (strain ATCC 29605

Query: 1 HGLPPVQDAL 10
HG+ P+QDA+
Sbjct: 159 HGMEPLQDAI 168


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 2 GLPPVQDAL 10
LPPV+D+L
Sbjct: 392 ALPPVRDSL 400


>sp|AOX2_AERPE|HEME-COPPER oxidase subunit 2|Aeropyrum pernix (strain ATCC 700893

Query: 4 PPVQDAL 10
PPV+DAL
Sbjct: 98 PPVEDAL 104


>sp|AMZA_METJA|ARCHAEMETZINCIN jannaschii (strain ATCC 43067

Query: 1 HGLPPVQDAL 10
+GLPP +D L
Sbjct: 109 YGLPPNKDVL 118


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HGLPP 5
HGLPP
Sbjct: 440 HGLPP 444


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 HGLPPVQ 7
HG PPV+
Sbjct: 205 HGTPPVR 211


>sp|FLPA_METHJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanospirillum hungatei JF-1

Query: 1 HGLPPVQDA 9
HG PPV++A
Sbjct: 41 HGEPPVRNA 49


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HGLPPVQDAL 10
HG PP + AL
Sbjct: 37 HGHPPKKKAL 46


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 HGLPPVQDAL 10
HG PP + AL
Sbjct: 37 HGNPPKKKAL 46


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HGLPPVQDAL 10
HG PP + AL
Sbjct: 37 HGNPPKKKAL 46


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 HGLPPVQDAL 10
HG PP + AL
Sbjct: 37 HGNPPKKKAL 46


>sp|DGGGP_PYRHO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GLPPVQ 7
G+PPVQ
Sbjct: 32 GIPPVQ 37


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 1 HGLPPVQ 7
HG PP++
Sbjct: 205 HGTPPIR 211


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 HGLPP 5
HG+PP
Sbjct: 438 HGIPP 442


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 HGLPP 5
HG+PP
Sbjct: 439 HGIPP 443


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 GLPPVQDAL 10
GLP ++DA+
Sbjct: 89 GLPELKDAI 97


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 HGLPP 5
HG+PP
Sbjct: 442 HGIPP 446


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HGLPP 5
HG+PP
Sbjct: 456 HGIPP 460


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 HGLPP 5
HG+PP
Sbjct: 448 HGIPP 452


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HGLPP 5
HG+PP
Sbjct: 443 HGIPP 447


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HGLPP 5
HG+PP
Sbjct: 456 HGIPP 460


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HGLPP 5
HG+PP
Sbjct: 456 HGIPP 460


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 HGLPP 5
HG+PP
Sbjct: 454 HGIPP 458


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HGLPP 5
HG+PP
Sbjct: 456 HGIPP 460


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 HGLPP 5
HG+PP
Sbjct: 441 HGIPP 445


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 LPPVQDAL 10
LPPV D+L
Sbjct: 319 LPPVWDSL 326


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HGLPP 5
HG+PP
Sbjct: 456 HGIPP 460


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 HGLPP 5
HG+PP
Sbjct: 455 HGIPP 459


>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 LPPVQDAL 10
LPPV D+L
Sbjct: 319 LPPVWDSL 326


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GLPPVQDA 9
G PP++DA
Sbjct: 311 GKPPMEDA 318


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 LPPVQD 8
LPPV+D
Sbjct: 280 LPPVED 285


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HGLPP 5
HG+PP
Sbjct: 455 HGIPP 459


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HGLPPVQD 8
+G PPV+D
Sbjct: 187 NGEPPVED 194


>sp|EHAA_METKA|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex membrane|Methanopyrus

Query: 2 GLPPVQ 7
GLPP+Q
Sbjct: 24 GLPPIQ 29




410|SequenceR|2055|2046|IVKPLHGLPP

>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 2 VKPLHGLPP 10
+ P+HG PP
Sbjct: 201 INPIHGTPP 209


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 VKPLHGLPP 10
+ P+HG PP
Sbjct: 201 INPVHGTPP 209


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 1 IVKPLHGLP 9
IV+PL GLP
Sbjct: 439 IVRPLTGLP 447


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 HGLPP 10
HGLPP
Sbjct: 440 HGLPP 444


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 1 IVKPLHGLPP 10
+ PL LPP
Sbjct: 68 LTTPLQSLPP 77


>sp|RL34_METTH|LARGE ribosomal subunit protein eL34|Methanothermobacter

Query: 3 KPLHGLP 9
KPLHG+P
Sbjct: 42 KPLHGVP 48


>sp|ASPD_METMP|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 3 KPLHGL 8
KP+HGL
Sbjct: 148 KPVHGL 153


>sp|ASPD_METM7|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 3 KPLHGL 8
KP+HGL
Sbjct: 148 KPVHGL 153


>sp|ASPD_METM5|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 3 KPLHGL 8
KP+HGL
Sbjct: 148 KPVHGL 153


>sp|RPO3_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum islandicum (strain DSM

Query: 1 IVKPLHGLPP 10
+ PL LPP
Sbjct: 68 LTTPLQALPP 77


>sp|ASPD_METM6|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 3 KPLHGL 8
KP+HGL
Sbjct: 148 KPVHGL 153


>sp|SECY_AERPE|PROTEIN translocase subunit SecY|Aeropyrum pernix (strain ATCC 700893

Query: 4 PLHGLPP 10
PL+G+PP
Sbjct: 47 PLYGIPP 53


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 6 HGLPP 10
HG+PP
Sbjct: 442 HGIPP 446


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 6 HGLPP 10
HG+PP
Sbjct: 438 HGIPP 442


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 6 HGLPP 10
HG+PP
Sbjct: 439 HGIPP 443


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 6 HGLPP 10
HG+PP
Sbjct: 448 HGIPP 452


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 6 HGLPP 10
HG+PP
Sbjct: 456 HGIPP 460


>sp|RPO3_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum neutrophilum (strain DSM

Query: 1 IVKPLHGLPP 10
+ PL LPP
Sbjct: 68 LTTPLQSLPP 77


>sp|DAPF_METAR|DIAMINOPIMELATE epimerase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IVKPLHG 7
I KPLHG
Sbjct: 143 INKPLHG 149


>sp|THIL_PYRCJ|THIAMINE-MONOPHOSPHATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 KPLHGLPP 10
KPL LPP
Sbjct: 178 KPLWPLPP 185


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 2 VKPLHGLPP 10
+KP HGL P
Sbjct: 208 LKPTHGLVP 216


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 6 HGLPP 10
HG+PP
Sbjct: 454 HGIPP 458


>sp|Y644_METJA|UNCHARACTERIZED protein MJ0644|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KPLHGLPP 10
KPL+G+ P
Sbjct: 30 KPLNGIKP 37


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 5 LHGLPP 10
L+GLPP
Sbjct: 432 LYGLPP 437


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 HGLPP 10
HG+PP
Sbjct: 456 HGIPP 460


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 6 HGLPP 10
HG+PP
Sbjct: 456 HGIPP 460


>sp|RPO3_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum arsenaticum (strain DSM

Query: 1 IVKPLHGLP 9
+ PLH LP
Sbjct: 68 LTTPLHSLP 76


>sp|LEUD_PYRNV|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 KPLHGLP 9
KPL GLP
Sbjct: 138 KPLRGLP 144


>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 3 KPLHG 7
KPLHG
Sbjct: 266 KPLHG 270


>sp|LEUD_PYRAE|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KPLHGLP 9
KPL GLP
Sbjct: 138 KPLRGLP 144


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 HGLPP 10
HG+PP
Sbjct: 456 HGIPP 460


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 6 HGLPP 10
HG+PP
Sbjct: 443 HGIPP 447


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 6 HGLPP 10
HG+PP
Sbjct: 456 HGIPP 460


>sp|GLNA_PYRHO|GLUTAMINE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KPLHGLP 9
KP++G+P
Sbjct: 226 KPIYGMP 232


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 6 HGLPP 10
HG+PP
Sbjct: 455 HGIPP 459


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 6 HGLPP 10
HG+PP
Sbjct: 455 HGIPP 459


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 6 HGLPP 10
HG+PP
Sbjct: 441 HGIPP 445


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 3 KPLHGLP 9
KP++G+P
Sbjct: 222 KPIYGMP 228


>sp|KPTA_AERPE|PROBABLE RNA 2'-phosphotransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VKPLHGLPP 10
V+PL G PP
Sbjct: 117 VEPLPGEPP 125


>sp|LEUD_PYRCJ|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum calidifontis (strain DSM

Query: 3 KPLHGLP 9
KPL GLP
Sbjct: 138 KPLAGLP 144




411|SequenceR|2060|2051|HNMAQIVKPL

>sp|RL18_METKA|LARGE ribosomal subunit protein uL18|Methanopyrus kandleri (strain AV19

Query: 1 HNMAQIV 7
HN+AQIV
Sbjct: 46 HNIAQIV 52


>sp|RL35A_PYRWO|LARGE ribosomal subunit protein eL33|Pyrococcus woesei

Query: 1 HNMAQIVKPL 10
HN I+KPL
Sbjct: 18 HNNVMIIKPL 27


>sp|RL35A_PYRFU|LARGE ribosomal subunit protein eL33|Pyrococcus furiosus (strain ATCC

Query: 1 HNMAQIVKPL 10
HN I+KPL
Sbjct: 18 HNNVMIIKPL 27


>sp|RL11_KORCO|LARGE ribosomal subunit protein uL11|Korarchaeum cryptofilum (strain

Query: 2 NMAQIVKPL 10
NM QIVK +
Sbjct: 31 NMGQIVKEI 39




412|SequenceR|2065|2056|IANNRHNMAQ

>sp|RL1_HYPBU|LARGE ribosomal subunit protein uL1|Hyperthermus butylicus (strain DSM

Query: 1 IANNRHNMAQ 10
+ N RHN+A+
Sbjct: 192 LPNARHNIAK 201


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IANNRHN 7
+ANN+HN
Sbjct: 434 LANNKHN 440


>sp|Y1085_METJA|UNCHARACTERIZED protein MJ1085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IANNRHNMA 9
+ NN HN++
Sbjct: 368 VLNNMHNLS 376




413|SequenceR|2070|2061|IASKPIANNR

>sp|GVPN_HALMT|GAS vesicle ATPase GvpN|Haloferax mediterranei (strain ATCC 33500

Query: 3 SKPIANN 9
+KP+ANN
Sbjct: 180 TKPVANN 186


>sp|GVPN1_HALSA|GAS vesicle ATPase GvpN1|Halobacterium salinarum (strain ATCC 700922

Query: 3 SKPIANN 9
+KP+ANN
Sbjct: 180 TKPVANN 186


>sp|Y858_METJA|UNCHARACTERIZED protein MJ0858|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SKPIANN 9
SKPI+NN
Sbjct: 104 SKPISNN 110


>sp|GVPN2_HALSA|GAS vesicle ATPase GvpN2|Halobacterium salinarum (strain ATCC 700922

Query: 3 SKPIANN 9
+KP+ANN
Sbjct: 178 TKPVANN 184




414|SequenceR|2075|2066|AHIVRIASKP

>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 1 AHIVRIASKP 10
AHI+++ +KP
Sbjct: 290 AHIIKVIAKP 299


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AHIVRIASKP 10
AHI+++ +KP
Sbjct: 290 AHIIKVIAKP 299


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 AHIVRIASKP 10
AH++++ +KP
Sbjct: 290 AHVIKVIAKP 299


>sp|RS13_METTH|SMALL ribosomal subunit protein uS13|Methanothermobacter

Query: 2 HIVRIASK 9
H+VRIA K
Sbjct: 7 HMVRIARK 14




415|SequenceR|2080|2071|ENESLAHIVR

>sp|Y1514_METJA|PUTATIVE gamma-glutamylcyclotransferase MJ1514|Methanocaldococcus

Query: 1 ENESLAHIV 9
ENE ++HIV
Sbjct: 48 ENEKISHIV 56


>sp|RS13_METAC|SMALL ribosomal subunit protein uS13|Methanosarcina acetivorans (strain

Query: 2 NESLAHIVR 10
NE L H+VR
Sbjct: 17 NEELRHLVR 25


>sp|NUSA_THEAC|PROBABLE transcription termination protein NusA|Thermoplasma acidophilum

Query: 1 ENESLAHI 8
+NE++AHI
Sbjct: 9 DNETMAHI 16


>sp|RS13_METMA|SMALL ribosomal subunit protein uS13|Methanosarcina mazei (strain ATCC

Query: 2 NESLAHIVR 10
NE L H+VR
Sbjct: 17 NEELRHLVR 25


>sp|KDGA_THETE|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Thermoproteus tenax

Query: 2 NESLAHIV 9
NESLAH +
Sbjct: 176 NESLAHTL 183


>sp|RS13_METBF|SMALL ribosomal subunit protein uS13|Methanosarcina barkeri (strain

Query: 2 NESLAHIVR 10
NE + H+VR
Sbjct: 17 NEEIRHLVR 25




416|SequenceR|2085|2076|ARVCLENESL

>sp|KPYK_METJA|PYRUVATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RVCLENESL 10
RVCLE ES+
Sbjct: 326 RVCLEVESI 334


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ARVCLENESL 10
ARVCL ++L
Sbjct: 111 ARVCLNQQTL 120


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 ARVCLENESL 10
ARVCL ++L
Sbjct: 111 ARVCLNQQTL 120


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 VCLENES 9
+C ENES
Sbjct: 342 ICFENES 348


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 ARVCLENESL 10
ARVCL ++L
Sbjct: 111 ARVCLNQQTL 120


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ARVCLENESL 10
ARVCL ++L
Sbjct: 111 ARVCLNQQTL 120


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 ARVCLENESL 10
ARVCL ++L
Sbjct: 111 ARVCLNQQTL 120


>sp|Y3512_METJA|UNCHARACTERIZED protein MJECL12|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VCLENESL 10
+CLENE +
Sbjct: 46 ICLENEDV 53


>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RVCLEN 7
RVC+EN
Sbjct: 230 RVCIEN 235


>sp|ALR_METMP|ALANINE racemase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ARVCLEN 7
+++CLEN
Sbjct: 49 SKICLEN 55




417|SequenceR|2090|2081|ELSAMARVCL

***** No hits found ******


418|SequenceR|2095|2086|LPGITELSAM

>sp|COBQ_HALSA|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGITELSA 9
PGITE+ A
Sbjct: 223 PGITEIEA 230


>sp|COBQ_HALS3|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PGITELSA 9
PGITE+ A
Sbjct: 223 PGITEIEA 230


>sp|LEUD_SULTO|3-ISOPROPYLMALATE dehydratase small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LPGITEL 7
LPG+T+L
Sbjct: 105 LPGVTQL 111


>sp|SELD_METKA|SELENIDE, water dikinase|Methanopyrus kandleri (strain AV19 /

Query: 1 LPGITELS 8
+PG TELS
Sbjct: 260 IPGTTELS 267




419|SequenceR|2100|2091|KMGNMLPGIT

>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KMGNMLPG 8
K+GN+LPG
Sbjct: 416 KLGNILPG 423


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MGNMLPGIT 10
+GN+LPG++
Sbjct: 350 VGNLLPGVS 358


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 1 KMGNMLPG 8
+MGN LPG
Sbjct: 266 QMGNALPG 273


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 MGNMLPGIT 10
MGN PGI+
Sbjct: 29 MGNRNPGIS 37


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GNMLPG 8
GNMLPG
Sbjct: 143 GNMLPG 148


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KMGNMLPGI 9
K GN+ PGI
Sbjct: 859 KEGNLNPGI 867


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 3 GNMLPGI 9
GNMLP +
Sbjct: 502 GNMLPDV 508


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 3 GNMLPGI 9
GNMLP +
Sbjct: 522 GNMLPDV 528


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 MGNMLPGI 9
MGN PGI
Sbjct: 32 MGNANPGI 39


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 MGNMLPGI 9
MGN PGI
Sbjct: 34 MGNRNPGI 41




420|SequenceR|2105|2096|TDARKKMGNM

>sp|RL11_KORCO|LARGE ribosomal subunit protein uL11|Korarchaeum cryptofilum (strain

Query: 1 TDARKKMGNM 10
+DA KK+GN+
Sbjct: 88 SDASKKIGNL 97


>sp|AROE_SACI6|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.4 /

Query: 4 RKKMGNM 10
RKK+GNM
Sbjct: 113 RKKIGNM 119


>sp|AROE_SACI4|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.14.25 /

Query: 4 RKKMGNM 10
RKK+GNM
Sbjct: 113 RKKIGNM 119


>sp|AROE_SACI3|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.27)

Query: 4 RKKMGNM 10
RKK+GNM
Sbjct: 113 RKKIGNM 119


>sp|AROE_SACI2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 RKKMGNM 10
RKK+GNM
Sbjct: 113 RKKIGNM 119


>sp|AROE_SACI1|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.N.15.51

Query: 4 RKKMGNM 10
RKK+GNM
Sbjct: 113 RKKIGNM 119


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.G.57.14

Query: 4 RKKMGNM 10
RKK+GNM
Sbjct: 113 RKKIGNM 119


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TDARKKMG 8
TDA KKMG
Sbjct: 139 TDAFKKMG 146


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC 700027

Query: 1 TDARKKMGN 9
+DAR+++GN
Sbjct: 159 SDARREIGN 167


>sp|KAE1_STAMF|TRNA N6-adenosine threonylcarbamoyltransferase|Staphylothermus marinus

Query: 2 DARKKMGNM 10
D +KK+GN+
Sbjct: 223 DNKKKLGNV 231


>sp|RFRNP_PYRFU|RNA-FREE ribonuclease P|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DARKKMGN 9
D RKK GN
Sbjct: 15 DVRKKFGN 22


>sp|Y476_PYRFU|PROTEIN PF0476|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DARKKMG 8
DARKKM
Sbjct: 120 DARKKMA 126


>sp|TRPD_CENSY|ANTHRANILATE phosphoribosyltransferase|Cenarchaeum symbiosum (strain A)

Query: 2 DARKKMG 8
DARKK+G
Sbjct: 161 DARKKVG 167




421|SequenceR|2110|2101|CALGVTDARK

>sp|TRPA_METB6|TRYPTOPHAN synthase alpha chain|Methanoregula boonei (strain DSM 21154

Query: 3 LGVTDARK 10
LGVT ARK
Sbjct: 177 LGVTGARK 184


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 1 CALGVTD 7
CA+G+T+
Sbjct: 181 CAMGITN 187


>sp|ARFB_META3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus aeolicus (strain ATCC

Query: 3 LGVTDARK 10
+G+T+ARK
Sbjct: 189 IGLTEARK 196




422|SequenceR|2115|2106|RNIAECALGV

>sp|RS15_METMJ|SMALL ribosomal subunit protein uS15|Methanoculleus marisnigri (strain

Query: 1 RNIAECALGV 10
RN+ E ALG+
Sbjct: 89 RNLMEKALGI 98


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RNIAECALGV 10
RN+ +C+L V
Sbjct: 153 RNVEKCSLKV 162


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RNIAECA 7
RN+ ECA
Sbjct: 260 RNLEECA 266


>sp|KHSE_METKA|HOMOSERINE kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 NIAECALG 9
N+A C LG
Sbjct: 135 NVAPCLLG 142




423|SequenceR|2120|2111|EKQFMRNIAE

>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 1 EKQFMRNIAE 10
EK+F+R IAE
Sbjct: 393 EKEFLRVIAE 402


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKQFMRNIAE 10
EK+F+R AE
Sbjct: 418 EKKFLRAYAE 427


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KQFMRNI 8
K+FMRN+
Sbjct: 105 KEFMRNL 111


>sp|SODF_SULAC|SUPEROXIDE dismutase [Fe]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EKQFMRNIAE 10
E FM +IAE
Sbjct: 154 ENHFMNHIAE 163


>sp|PUR2_METM5|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C5 /

Query: 2 KQFMRNI 8
K+FMRN+
Sbjct: 105 KEFMRNL 111


>sp|PUR2_METM6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C6 /

Query: 2 KQFMRNI 8
K+FMRN+
Sbjct: 105 KEFMRNL 111


>sp|PUR2_METMP|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KQFMRNI 8
K+FMRN+
Sbjct: 105 KEFMRNL 111


>sp|PUR2_METM7|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C7 /

Query: 2 KQFMRNI 8
K+FMRN+
Sbjct: 105 KEFMRNL 111




424|SequenceR|2125|2116|VLESQEKQFM

>sp|Y1109_METTH|PUTATIVE nickel insertion protein|Methanothermobacter thermautotrophicus

Query: 1 VLESQEKQF 9
V+E EKQF
Sbjct: 385 VIEMSEKQF 393


>sp|Y679_METMA|UPF0285 protein MM_0679|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLESQEKQF 9
+LES EK+F
Sbjct: 41 ILESIEKEF 49


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLESQEKQF 9
+LES+E++F
Sbjct: 411 ILESEEEKF 419


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VLESQEKQF 9
+LES+E++F
Sbjct: 411 ILESEEEKF 419




425|SequenceR|2130|2121|KLAQAVLESQ

>sp|RS2_METS3|SMALL ribosomal subunit protein uS2|Methanobrevibacter smithii (strain

Query: 3 AQAVLESQ 10
AQAVLES+
Sbjct: 123 AQAVLESK 130




426|SequenceR|2135|2126|PVLDAKLAQA

>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 3 LDAKLAQ 9
LDAKLAQ
Sbjct: 410 LDAKLAQ 416


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 PVLDAKLAQA 10
PV+DAK+ +
Sbjct: 173 PVIDAKIGSS 182


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VLDAKLAQA 10
+LDAKL+Q+
Sbjct: 161 MLDAKLSQS 169


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 PVLDAKLAQA 10
PV+DAK+ +
Sbjct: 174 PVVDAKIGSS 183


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 PVLDAKLAQA 10
PV+DAK+ +
Sbjct: 174 PVVDAKIGSS 183


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 PVLDAKLAQA 10
PV+DAK+ +
Sbjct: 173 PVVDAKIGSS 182


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PVLDAK 6
PVLDAK
Sbjct: 519 PVLDAK 524




427|SequenceR|2140|2131|LKLLYPVLDA

>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 LLYPVLDA 10
+LYP LDA
Sbjct: 204 ILYPQLDA 211


>sp|SAHH_PYRAE|ADENOSYLHOMOCYSTEINASE aerophilum (strain ATCC 51768

Query: 2 KLLYPVL 8
KLLYP++
Sbjct: 186 KLLYPII 192


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 LKLLYPVL 8
LKLL+PV+
Sbjct: 755 LKLLHPVI 762


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 2 KLLYPVL 8
+LLYPV+
Sbjct: 167 RLLYPVI 173


>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LKLLYPVLDA 10
+K+LY VLD
Sbjct: 1 MKILYIVLDG 10


>sp|GPGS_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KLLYPVLD 9
KLLYP+++
Sbjct: 157 KLLYPIVE 164


>sp|KTHY_CALMQ|PROBABLE thymidylate kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 YPVLDA 10
YPV+DA
Sbjct: 172 YPVIDA 177


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 1 LKLLYPVLD 9
++ LYP++D
Sbjct: 140 VRKLYPIID 148


>sp|KTHY_PYRAE|PROBABLE thymidylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 YPVLDA 10
YPV+DA
Sbjct: 165 YPVIDA 170


>sp|KTHY_PYRCJ|PROBABLE thymidylate kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 YPVLDA 10
YPV+DA
Sbjct: 164 YPVIDA 169


>sp|CBP1_PYRFU|THERMOSTABLE carboxypeptidase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LKLLYPVL 8
++L+YPVL
Sbjct: 316 VELIYPVL 323




428|SequenceR|2145|2136|GIGELLKLLY

>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 3 GELLKLLY 10
GEL++LLY
Sbjct: 14 GELVRLLY 21


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IGELLKL 8
IGELLKL
Sbjct: 404 IGELLKL 410


>sp|PYRH_CENSY|URIDYLATE kinase|Cenarchaeum symbiosum (strain A)

Query: 1 GIGELLKLL 9
G+GEL K+L
Sbjct: 164 GLGELRKML 172


>sp|RSMA_METVS|PROBABLE ribosomal RNA small subunit|Methanococcus vannielii (strain ATCC

Query: 2 IGELLKLLY 10
IGEL +LY
Sbjct: 252 IGELSNILY 260




429|SequenceR|2150|2141|DLNELGIGEL

>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DLNELGIGEL 10
DL E+GIGE+
Sbjct: 420 DLIEMGIGEV 429


>sp|G1PDH_CALMQ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Caldivirga maquilingensis (strain ATCC

Query: 1 DLNELGIGEL 10
DLN+LG+G++
Sbjct: 132 DLNKLGVGKV 141


>sp|GPDA_METTH|GLYCEROL-3-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 2 LNELGIGEL 10
LNE+G GEL
Sbjct: 221 LNEMGYGEL 229


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ELGIGEL 10
ELG+GEL
Sbjct: 430 ELGVGEL 436


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LNELGIGE 9
L ELGIGE
Sbjct: 58 LPELGIGE 65


>sp|RL15_SACS2|LARGE ribosomal subunit protein uL15|Saccharolobus solfataricus (strain

Query: 1 DLNELGIGEL 10
DLNELG +L
Sbjct: 97 DLNELGYNKL 106


>sp|RS24_AERPE|SMALL ribosomal subunit protein eS24|Aeropyrum pernix (strain ATCC

Query: 1 DLNELGIGEL 10
DL E+G GE+
Sbjct: 13 DLGEMGWGEV 22


>sp|DPO4_SULAC|DNA polymerase IV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LNELGIGEL 10
LNELGI +L
Sbjct: 195 LNELGIQKL 203


>sp|DPO4_SACSO|DNA polymerase IV|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 2 LNELGIGEL 10
LNELGI +L
Sbjct: 195 LNELGIQKL 203


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LNELGIGE 9
L ELG+GE
Sbjct: 56 LPELGVGE 63


>sp|AGLR_HALVD|PROBABLE flippase AglR|Haloferax volcanii (strain ATCC 29605

Query: 2 LNELGIG 8
+NELG+G
Sbjct: 30 INELGVG 36


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 2 LNELGIGEL 10
LNE+GI EL
Sbjct: 8 LNEIGIEEL 16


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLNELGIGE 9
D ELGIGE
Sbjct: 58 DERELGIGE 66


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 LNELGIGE 9
L ELG+GE
Sbjct: 56 LPELGVGE 63


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 2 LNELGIGE 9
L ELGIGE
Sbjct: 603 LEELGIGE 610


>sp|MPTA_HALSA|GTP cyclohydrolase MptA|Halobacterium salinarum (strain ATCC 700922

Query: 2 LNELGIGE 9
L ELG+GE
Sbjct: 173 LAELGVGE 180


>sp|MPTA_HALS3|GTP cyclohydrolase MptA|Halobacterium salinarum (strain ATCC 29341

Query: 2 LNELGIGE 9
L ELG+GE
Sbjct: 173 LAELGVGE 180


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 4 ELGIGE 9
ELGIGE
Sbjct: 58 ELGIGE 63


>sp|CAS8_THETK|CRISPR system associated protein Cas8|Thermoproteus tenax (strain ATCC

Query: 1 DLNELG 6
DLNELG
Sbjct: 240 DLNELG 245


>sp|DNLI_THEFM|DNA ligase|Thermococcus fumicolans

Query: 1 DLNELGIGE 9
D ELG+GE
Sbjct: 54 DERELGVGE 62


>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DLNELGIGE 9
+LN LGIG+
Sbjct: 24 ELNILGIGQ 32


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 2 LNELGIGEL 10
+NE+GI EL
Sbjct: 337 INEVGIPEL 345


>sp|DNLI_THEKO|DNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DLNELGIGE 9
D ELG+GE
Sbjct: 54 DERELGVGE 62


>sp|FLAB3_NATMM|FLAGELLIN B3|Natrialba magadii (strain ATCC 43099

Query: 1 DLNELGIGE 9
D+N LG GE
Sbjct: 72 DVNTLGAGE 80


>sp|DNLI_THEON|DNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 DLNELGIGE 9
D ELG+GE
Sbjct: 57 DERELGVGE 65


>sp|DNLI_PYRHO|DNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DLNELGIGE 9
D ELG+GE
Sbjct: 54 DERELGVGE 62


>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 1 DLNELGIGE 9
D ELG+GE
Sbjct: 54 DERELGVGE 62


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DLNELGIGE 9
D ELG+GE
Sbjct: 54 DERELGVGE 62


>sp|DTDA_METTP|D-AMINOACYL-TRNA deacylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DLNELGIGEL 10
DLN +GI E+
Sbjct: 255 DLNVMGIKEV 264


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 ELGIGE 9
ELGIGE
Sbjct: 58 ELGIGE 63


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 ELGIGE 9
ELGIGE
Sbjct: 58 ELGIGE 63


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 4 ELGIGE 9
ELGIGE
Sbjct: 58 ELGIGE 63


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 ELGIGE 9
ELGIGE
Sbjct: 58 ELGIGE 63


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 ELGIGE 9
ELGIGE
Sbjct: 58 ELGIGE 63


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 ELGIGE 9
ELGIGE
Sbjct: 58 ELGIGE 63


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 ELGIGE 9
ELGIGE
Sbjct: 58 ELGIGE 63


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 ELGIGE 9
ELGIGE
Sbjct: 58 ELGIGE 63


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NELGIGEL 10
NEL +GE+
Sbjct: 252 NELNVGEI 259


>sp|DNLI_PYRFU|DNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLNELGIGE 9
D ELG+GE
Sbjct: 54 DERELGVGE 62


>sp|SYFB_SACS2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LNELGIGE 9
LN++GIG+
Sbjct: 12 LNKIGIGQ 19




430|SequenceR|2155|2146|TAAPSDLNEL

>sp|CAS8_THETK|CRISPR system associated protein Cas8|Thermoproteus tenax (strain ATCC

Query: 4 PSDLNEL 10
P DLNEL
Sbjct: 238 PGDLNEL 244


>sp|PURO_METJA|IMP cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PSDLNEL 10
P DLNE+
Sbjct: 45 PKDLNEM 51


>sp|Y360_CALMQ|PROTEIN Cmaq_0360|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 APSDLNEL 10
AP D+NEL
Sbjct: 95 APLDVNEL 102


>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 1 TAAPSDLNEL 10
T A SD+NE
Sbjct: 295 TLASSDINEF 304




431|SequenceR|2160|2151|VIQAKTAAPS

***** No hits found ******


432|SequenceR|2165|2156|AKLAKVIQAK

>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 AKLAKVIQAK 10
A +AK++QA+
Sbjct: 22 ASIAKILQAR 31




433|SequenceR|2170|2161|LSRTMAKLAK

>sp|SRP54_METTH|SIGNAL recognition particle 54 kDa|Methanothermobacter

Query: 1 LSRTMAKLA 9
LS+TM KLA
Sbjct: 9 LSKTMKKLA 17


>sp|RSMA_METVS|PROBABLE ribosomal RNA small subunit|Methanococcus vannielii (strain ATCC

Query: 1 LSRTMAKLAK 10
L++ +AKLAK
Sbjct: 43 LTKELAKLAK 52




434|SequenceR|2175|2166|QEGYQLSRTM

>sp|UPP_THEGJ|URACIL phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 3 GYQLSRTM 10
GY+L++TM
Sbjct: 48 GYELTKTM 55


>sp|UPP_METVS|URACIL phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 3 GYQLSRTM 10
GY+L++TM
Sbjct: 48 GYELTKTM 55


>sp|UPP_METMP|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 3 GYQLSRTM 10
GY+L++TM
Sbjct: 48 GYELTKTM 55


>sp|UPP_PYRAB|URACIL phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 GYQLSRTM 10
GY+L++TM
Sbjct: 48 GYELTKTM 55


>sp|UPP_METM5|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 3 GYQLSRTM 10
GY+L++TM
Sbjct: 48 GYELTKTM 55


>sp|UPP_METM6|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 3 GYQLSRTM 10
GY+L++TM
Sbjct: 48 GYELTKTM 55


>sp|MFNA_HALSA|PROBABLE L-aspartate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 1 QEGYQLSRT 9
+EG+++SRT
Sbjct: 318 EEGWRISRT 326


>sp|MFNA_HALS3|PROBABLE L-aspartate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 1 QEGYQLSRT 9
+EG+++SRT
Sbjct: 318 EEGWRISRT 326


>sp|UPP_METM7|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 3 GYQLSRTM 10
GY+L++TM
Sbjct: 48 GYELTKTM 55


>sp|UPP_PYRFU|URACIL phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GYQLSRTM 10
GY++++TM
Sbjct: 48 GYEITKTM 55


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 QEGYQLSRTM 10
+EGY+++ T+
Sbjct: 1009 KEGYEITATL 1018




435|SequenceR|2180|2171|LIENVQEGYQ

>sp|MRE11_THEAC|DNA double-strand break repair protein|Thermoplasma acidophilum (strain

Query: 3 ENVQEGYQ 10
EN++EGY+
Sbjct: 145 ENIEEGYR 152


>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 2 IENVQEGYQ 10
IENV+E Y+
Sbjct: 170 IENVEEAYR 178


>sp|ACAR_SULTO|ACRYLOYL-COENZYME A reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IENVQEGYQ 10
+EN+ EGY+
Sbjct: 311 LENIDEGYK 319


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain

Query: 3 ENVQEGYQ 10
ENV+EG++
Sbjct: 34 ENVKEGFE 41


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 IENVQEG 8
I+NVQEG
Sbjct: 289 IKNVQEG 295


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 IENVQEGYQ 10
I+N++E Y+
Sbjct: 390 IDNIKEAYE 398


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LIENVQEGY 9
L+E V++GY
Sbjct: 932 LVEEVEKGY 940


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIENVQEG 8
L+EN++EG
Sbjct: 338 LLENIKEG 345


>sp|PIP_SACS2|PROLINE iminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 NVQEGYQ 10
NV+EGY+
Sbjct: 14 NVEEGYK 20


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IENVQEGYQ 10
IEN+ E YQ
Sbjct: 177 IENLLENYQ 185




436|SequenceR|2185|2176|VSSRCLIENV

>sp|Y317_METJA|UNCHARACTERIZED protein MJ0317|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RCLIENV 10
RCL+E+V
Sbjct: 174 RCLLEDV 180


>sp|PDAD_META3|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VSSRCLIENV 10
++S C +EN+
Sbjct: 144 LASECTVENI 153




437|SequenceR|2190|2181|KFASWVSSRC

>sp|RL2_METPE|LARGE ribosomal subunit protein uL2|Methanosphaerula palustris (strain

Query: 5 WVSSRC 10
W SSRC
Sbjct: 148 WFSSRC 153


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SWVSSRC 10
SWV RC
Sbjct: 260 SWVKDRC 266


>sp|RRP4_PYRHO|EXOSOME complex component Rrp4|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KFASWV 6
KF+SWV
Sbjct: 76 KFSSWV 81


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 1 KFASWV 6
KF+SWV
Sbjct: 76 KFSSWV 81


>sp|MBD_THEAC|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma acidophilum (strain

Query: 4 SWVSSR 9
SW+SSR
Sbjct: 24 SWISSR 29


>sp|DTDA_IGNH4|D-AMINOACYL-TRNA deacylase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 ASWVSSRC 10
ASW RC
Sbjct: 150 ASWEEHRC 157


>sp|CRYD_NATPD|CRYPTOCHROME DASH|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KFASWVSSRC 10
KF+ W+++ C
Sbjct: 247 KFSPWLAAGC 256


>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter thermautotrophicus

Query: 1 KFASWV 6
KF+SW+
Sbjct: 125 KFSSWI 130


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KFASWVSS 8
K SW+SS
Sbjct: 198 KIRSWISS 205




438|SequenceR|2195|2186|DHKQDKFASW

>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DHKQDKFASW 10
D K +KF SW
Sbjct: 217 DGKTEKFNSW 226


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 DHKQDKFAS 9
+HK+D FA+
Sbjct: 130 EHKKDAFAN 138


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DHKQDKFASW 10
D D+F+SW
Sbjct: 217 DGSIDRFSSW 226


>sp|TRM1_METJA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocaldococcus

Query: 2 HKQDKF 7
HK+DKF
Sbjct: 49 HKRDKF 54


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 KQDKFASW 10
+ D+FA+W
Sbjct: 138 RYDRFAAW 145


>sp|Y36K_HALSN|UNCHARACTERIZED 36 kDa protein|Halobacterium sp. (strain GN101)

Query: 1 DHKQDKFASW 10
DH +D +SW
Sbjct: 118 DHLRDLLSSW 127


>sp|KPTA_PYRAB|PROBABLE RNA 2'-phosphotransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 DHKQDK 6
DHK+DK
Sbjct: 89 DHKEDK 94


>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DHKQDKFASW 10
D + KFA W
Sbjct: 156 DGVESKFAKW 165




439|SequenceR|2200|2191|ESIFLDHKQD

>sp|PSTB_PYRAE|PHOSPHATE import ATP-binding protein PstB|Pyrobaculum aerophilum (strain ATCC

Query: 1 ESIFLDHKQD 10
ES+FL+ K+D
Sbjct: 186 ESLFLELKKD 195


>sp|KPTA_PYRAB|PROBABLE RNA 2'-phosphotransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 IFLDHKQD 10
+ LDHK+D
Sbjct: 86 VILDHKED 93




440|SequenceR|2205|2196|GATQSESIFL

***** No hits found ******


441|SequenceR|2210|2201|PGTLYGATQS

>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PGTLYGAT 8
P TLYGAT
Sbjct: 221 PETLYGAT 228


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 PGTLYGATQ 9
PG +YGA Q
Sbjct: 215 PGGMYGAIQ 223


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PGTLYGAT 8
P T+YGAT
Sbjct: 217 PETIYGAT 224


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 1 PGTLYGA 7
PGTL+G+
Sbjct: 384 PGTLFGS 390


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGTLYGAT 8
P TLY AT
Sbjct: 213 PATLYAAT 220


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PGTLYGAT 8
P TL+GAT
Sbjct: 240 PETLFGAT 247


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGTLYGATQS 10
PG LYG+ +
Sbjct: 346 PGNLYGSVTT 355


>sp|ARFB_METTM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter marburgensis

Query: 2 GTLYGATQ 9
G +YGAT+
Sbjct: 61 GVIYGATE 68


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC 700027

Query: 1 PGTLYGAT 8
PG+L+G T
Sbjct: 286 PGSLHGKT 293


>sp|PRIS_ARCFU|DNA primase small subunit PriS|Archaeoglobus fulgidus (strain ATCC

Query: 1 PGTLYGAT 8
PG+L+G T
Sbjct: 257 PGSLHGKT 264


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGTLYGATQS 10
PG LYG + +
Sbjct: 362 PGLLYGISNA 371


>sp|METXA_HALMA|HOMOSERINE O-acetyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PGTLYGAT 8
PG+ YG+T
Sbjct: 91 PGSCYGST 98




442|SequenceR|2215|2206|YGAVGPGTLY

>sp|Y367_PYRAB|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus abyssi

Query: 3 AVGPGTLY 10
AV PGTLY
Sbjct: 97 AVTPGTLY 104


>sp|Y1808_PYRHO|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus horikoshii

Query: 3 AVGPGTLY 10
A+ PGTLY
Sbjct: 97 AITPGTLY 104


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 3 AVGPGTLY 10
A GPGT+Y
Sbjct: 101 AEGPGTVY 108


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 3 AVGPGTLY 10
A GPGT+Y
Sbjct: 101 AEGPGTVY 108


>sp|KAE1B_METS3|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GAVGPGTLY 10
GAV P TLY
Sbjct: 124 GAVNPVTLY 132


>sp|GVPE2_HALSA|TRANSCRIPTIONAL activator GvpE2|Halobacterium salinarum (strain ATCC 700922

Query: 1 YGA-VGPGTLY 10
+GA V PGT+Y
Sbjct: 114 FGADVSPGTMY 124


>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 1 YGAVGPGTL 9
YG + PG L
Sbjct: 340 YGGIAPGRL 348


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 2 GAVGPG 7
GAVGPG
Sbjct: 261 GAVGPG 266


>sp|RNH2_NATPD|RIBONUCLEASE HII|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YGAVGPG 7
YGAVG G
Sbjct: 159 YGAVGSG 165


>sp|LEUC_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YGAVGPG 7
YG +GPG
Sbjct: 373 YGVLGPG 379


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 YGAVGP 6
YGA GP
Sbjct: 399 YGATGP 404


>sp|FLAB3_METVS|FLAGELLIN B3|Methanococcus vannielii (strain ATCC 35089

Query: 2 GAVGPGTL 9
GAVG GTL
Sbjct: 11 GAVGIGTL 18


>sp|RPO3_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 5 GPGTLY 10
GPGT Y
Sbjct: 92 GPGTAY 97


>sp|RPO3_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 5 GPGTLY 10
GPGT Y
Sbjct: 92 GPGTAY 97


>sp|PSB_ACIB4|PROTEASOME subunit beta|Aciduliprofundum boonei (strain DSM 19572

Query: 1 YGAVGPGTLY 10
Y +VG G+L+
Sbjct: 132 YASVGSGSLF 141


>sp|FLAB3_METVO|FLAGELLIN B3|Methanococcus voltae

Query: 2 GAVGPGTL 9
GAVG GTL
Sbjct: 11 GAVGIGTL 18


>sp|FLA3_PYRHO|PROBABLE flagellin PH0549|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GAVGPGTL 9
GAVG GTL
Sbjct: 4 GAVGIGTL 11


>sp|LYEL_HALJT|LYCOPENE elongase/hydratase|Haloarcula japonica (strain ATCC 49778

Query: 1 YGAVGPGTLY 10
Y A GPG L+
Sbjct: 45 YAADGPGELF 54


>sp|FLA2_PYRHO|PROBABLE flagellin PH0548|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GAVGPGTL 9
GAVG GTL
Sbjct: 4 GAVGIGTL 11




443|SequenceR|2220|2211|TGATLYGAVG

>sp|DUT_METJA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Methanocaldococcus jannaschii

Query: 2 GATLYGAV 9
GATLY AV
Sbjct: 100 GATLYSAV 107


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 2 GATLYGAV 9
GA++YGA+
Sbjct: 137 GASVYGAL 144


>sp|Y1005_PYRIL|PROTEIN Pisl_1005|Pyrobaculum islandicum (strain DSM 4184

Query: 3 ATLYGAVG 10
AT+Y A+G
Sbjct: 77 ATIYSAIG 84


>sp|Y011_PYRAR|PROTEIN Pars_0011|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 ATLYGAVG 10
AT+Y A+G
Sbjct: 77 ATIYSAIG 84


>sp|PMDHL_METJA|PHOSPHOMEVALONATE dehydratase large subunit|Methanocaldococcus jannaschii (strain

Query: 2 GATLYGAVG 10
G + YGA+G
Sbjct: 200 GESFYGALG 208


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 GATLYGAVG 10
GAT YG+VG
Sbjct: 3499 GATGYGSVG 3507


>sp|LEU3_HALVD|3-ISOPROPYLMALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 3 ATLYGAVG 10
ATL+GA G
Sbjct: 63 ATLFGAAG 70


>sp|LEU3_METTH|3-ISOPROPYLMALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 ATLYGAVG 10
ATL+GA G
Sbjct: 65 ATLFGAAG 72




444|SequenceR|2225|2216|MVSTSTGATL

>sp|NPPNK_METJA|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanocaldococcus jannaschii (strain

Query: 1 MVSTSTGAT 9
+VST TG+T
Sbjct: 469 IVSTPTGST 477


>sp|NADK_THEON|NAD kinase|Thermococcus onnurineus (strain NA1)

Query: 1 MVSTSTGAT 9
+VST TG+T
Sbjct: 170 IVSTPTGST 178


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 MVSTSTGAT 9
+VST TG+T
Sbjct: 170 IVSTPTGST 178


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VSTSTGATL 10
VST GATL
Sbjct: 385 VSTGGGATL 393


>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MVSTSTGAT 9
+VST TG+T
Sbjct: 170 VVSTPTGST 178


>sp|NADK_PYRFU|NAD kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MVSTSTGAT 9
+VST TG+T
Sbjct: 170 VVSTPTGST 178




445|SequenceR|2230|2221|PPLNSMVSTS

>sp|AATE_PICTO|A-TYPE ATP synthase subunit E|Picrophilus torridus (strain ATCC 700027

Query: 3 LNSMVSTS 10
LNSMVST+
Sbjct: 106 LNSMVSTA 113


>sp|HEM3_PYRAR|PROBABLE porphobilinogen deaminase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PPLNSMVSTS 10
PP +++VST+
Sbjct: 100 PPFDAVVSTA 109


>sp|PIMT_METVS|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PLNSMVS 8
PLN MVS
Sbjct: 2 PLNEMVS 8


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PPLNSMVSTS 10
PP+NS++ S
Sbjct: 184 PPVNSLLVVS 193




446|SequenceR|2235|2226|EHDVPPPLNS

>sp|RNH2_METB6|RIBONUCLEASE HII|Methanoregula boonei (strain DSM 21154

Query: 1 EHDVPPPL 8
EH +PPP+
Sbjct: 182 EHRIPPPI 189


>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HDVPPPLNS 10
H P PLNS
Sbjct: 65 HQYPEPLNS 73


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HDVPPPLNS 10
HD+P P+N+
Sbjct: 65 HDLPEPVNA 73


>sp|TRPB2_AERPE|TRYPTOPHAN synthase beta chain 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 DVPPPLN 9
+VPPPLN
Sbjct: 29 EVPPPLN 35


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DVPPPLNS 10
D PPP S
Sbjct: 73 DTPPPFTS 80


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DVPPPLNS 10
D PPP S
Sbjct: 82 DTPPPFTS 89


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 DVPPPLN 9
+VPPP N
Sbjct: 111 EVPPPAN 117


>sp|FLAB1_AERPE|PROBABLE flagellin 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 DVPPPLNS 10
++P PLNS
Sbjct: 161 ELPTPLNS 168


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DVPPPLNS 10
D PPP S
Sbjct: 56 DTPPPFTS 63


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 4 VPPPLN 9
VPPP N
Sbjct: 112 VPPPAN 117


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 VPPPLN 9
VPPP N
Sbjct: 97 VPPPAN 102


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 VPPPLN 9
VPPP N
Sbjct: 112 VPPPAN 117


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 VPPPLN 9
VPPP N
Sbjct: 113 VPPPTN 118


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 VPPPLN 9
VPPP N
Sbjct: 106 VPPPAN 111


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 VPPPLN 9
VPPP N
Sbjct: 113 VPPPAN 118


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 VPPPLN 9
VPPP N
Sbjct: 113 VPPPAN 118


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EHDVPPPLN 9
EH +P P N
Sbjct: 172 EHTIPVPFN 180


>sp|Y287_METJA|UNCHARACTERIZED protein MJ0287|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VPPPLNS 10
+PPPL++
Sbjct: 3 IPPPLSN 9


>sp|RL10E_AERPE|LARGE ribosomal subunit protein uL16|Aeropyrum pernix (strain ATCC

Query: 2 HDVPPP 7
H VPPP
Sbjct: 24 HGVPPP 29


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 VPPPLN 9
VPPP N
Sbjct: 113 VPPPAN 118


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 VPPPLN 9
VPPP N
Sbjct: 113 VPPPAN 118


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 VPPPLN 9
VPPP N
Sbjct: 113 VPPPAN 118


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 VPPPLN 9
VPPP N
Sbjct: 111 VPPPAN 116


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 VPPPLN 9
VPPP N
Sbjct: 108 VPPPAN 113


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 VPPPLN 9
VPPP N
Sbjct: 113 VPPPAN 118


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 VPPPLN 9
VPPP N
Sbjct: 108 VPPPAN 113


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 VPPPLN 9
VPPP N
Sbjct: 108 VPPPAN 113


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 VPPPLN 9
VPPP N
Sbjct: 108 VPPPAN 113


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 VPPPLN 9
VPPP N
Sbjct: 108 VPPPAN 113


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 VPPPLN 9
VPPP N
Sbjct: 111 VPPPAN 116


>sp|GPMA_METHJ|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HDVPPP 7
+D+PPP
Sbjct: 117 YDIPPP 122


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 DVPPPLNS 10
D PPP S
Sbjct: 39 DTPPPFTS 46


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DVPPPLNS 10
D PPP S
Sbjct: 39 DTPPPFTS 46


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 VPPPLN 9
VPPP N
Sbjct: 113 VPPPAN 118


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 VPPPLN 9
VPPP N
Sbjct: 110 VPPPAN 115


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DVPPPLNS 10
D PPP S
Sbjct: 39 DTPPPFTS 46


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 VPPPLN 9
VPPP N
Sbjct: 111 VPPPAN 116


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 VPPPLN 9
VPPP N
Sbjct: 114 VPPPAN 119


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 VPPPLN 9
VPPP N
Sbjct: 110 VPPPAN 115


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 VPPPLN 9
VPPP N
Sbjct: 111 VPPPAN 116


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 VPPPLN 9
VPPP N
Sbjct: 111 VPPPAN 116


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DVPPPLNS 10
D PPP S
Sbjct: 39 DTPPPFTS 46


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 VPPPLN 9
VPPP N
Sbjct: 115 VPPPAN 120


>sp|FOLD_PYRAR|BIFUNCTIONAL protein FolD|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HDVPP 6
HDVPP
Sbjct: 73 HDVPP 77


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 VPPPLN 9
VPPP N
Sbjct: 110 VPPPAN 115


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EHDVPP 6
EHD PP
Sbjct: 192 EHDEPP 197


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 VPPPLNS 10
VPP LNS
Sbjct: 277 VPPNLNS 283




447|SequenceR|2243|2231|TQYGLDGAEHDVP

>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QYGLDGAEHDVP 13
+ GLD AEH +P
Sbjct: 401 KMGLDMAEHKMP 412


>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TQYGLDGAEHDV 12
T +G++ A+HDV
Sbjct: 136 TPFGIEKADHDV 147


>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 3 YGLDGAEHDV 12
YG+DG +H +
Sbjct: 209 YGIDGIKHRI 218


>sp|IDI2_METBF|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QYGLDGAE 9
QYG+DG E
Sbjct: 134 QYGVDGVE 141


>sp|PGK2_METKA|2-PHOSPHOGLYCERATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 6 DGAEHDVP 13
D EHD+P
Sbjct: 284 DAEEHDIP 291


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 6 DGAEHDVP 13
DG E+D+P
Sbjct: 530 DGVENDIP 537


>sp|Y441_NANEQ|PROTEIN NEQ441|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 QYGLDGAEHDVP 13
+Y L+G ++++P
Sbjct: 12 EYALEGKDYEIP 23


>sp|HPRL_HALLT|HGPRTASE-LIKE protein|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 QYGLDG 7
QYGLDG
Sbjct: 86 QYGLDG 91


>sp|MRE11_METMP|DNA double-strand break repair protein|Methanococcus maripaludis

Query: 2 QYGLDGAEHDV 12
QY LD E+D+
Sbjct: 15 QYNLDERENDI 25


>sp|MRE11_SULTO|DNA double-strand break repair protein|Sulfurisphaera tokodaii

Query: 2 QYGLDGAEHDV 12
QY LD E DV
Sbjct: 18 QYNLDFREQDV 28


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 3 YGLDGAEH 10
YGLDG E
Sbjct: 397 YGLDGVER 404


>sp|TRPA_PYRFU|TRYPTOPHAN synthase alpha chain|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YGLDGAEHDVP 13
YG GA ++P
Sbjct: 166 YGTTGAREEIP 176


>sp|HPRL2_HALMA|HGPRTASE-LIKE protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 QYGLDG 7
QYGLDG
Sbjct: 86 QYGLDG 91


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM 6242

Query: 1 TQYGLDGAEHDVP 13
T YG AE D+P
Sbjct: 214 TGYGAGDAETDMP 226


>sp|HPRL_HALMD|HGPRTASE-LIKE protein|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 QYGLDG 7
QYGLDG
Sbjct: 86 QYGLDG 91


>sp|AMT2_HALMT|AMMONIUM transporter Amt2|Haloferax mediterranei (strain ATCC 33500

Query: 4 GLDGAEHDV 12
GLD AEH V
Sbjct: 413 GLDTAEHGV 421


>sp|PELO_SULAC|PROTEIN pelota homolog|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QYGLDGAEHDV 12
++G+ GA H V
Sbjct: 85 RFGIKGAHHTV 95


>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 QYGLDGAEHDV 12
+ G+DG +H+V
Sbjct: 34 RVGVDGTDHEV 44


>sp|TRUA_METM6|TRNA pseudouridine synthase A|Methanococcus maripaludis (strain C6 /

Query: 2 QYGLDGAEHDV 12
QY L HDV
Sbjct: 104 QYNLPNKNHDV 114


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YGLDGAEHDVP 13
Y DG H VP
Sbjct: 233 YTKDGEVHSVP 243


>sp|Y891_STAMF|UPF0173 metal-dependent hydrolase Smar_0891|Staphylothermus marinus

Query: 4 GLDGAEHDV 12
GLDGAE +
Sbjct: 18 GLDGAEKTI 26


>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 3 YGLDGA 8
YG+DGA
Sbjct: 32 YGIDGA 37


>sp|IDI2_METAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QYGLDGAE 9
QYG++G E
Sbjct: 134 QYGVEGVE 141


>sp|IDI2_METMA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QYGLDGAE 9
QYG++G E
Sbjct: 134 QYGVEGVE 141


>sp|PELO_SACS2|PROTEIN pelota homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QYGLDGAEHDV 12
++G+ GA H +
Sbjct: 85 RFGIKGAHHTI 95


>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 2 QYGLDGAEHDV 12
+ G+DG +H+V
Sbjct: 34 RVGVDGTDHEV 44


>sp|GCH3_HALLT|GTP cyclohydrolase III|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 GLDGAEH 10
GLDGA H
Sbjct: 65 GLDGAAH 71


>sp|RDFA_HALVD|ROD-DETERMINING factor A|Haloferax volcanii (strain ATCC 29605

Query: 2 QYGLDGAEHDV 12
+YGLDG D+
Sbjct: 24 RYGLDGLGDDL 34


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 YGLDGAEHDV 12
YG DGAE ++
Sbjct: 701 YGADGAEAEL 710


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 4 GLDGAEHDV 12
GLDG +H V
Sbjct: 339 GLDGIKHKV 347


>sp|GLCDH_HALMA|GLUCOSE 1-dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 2 QYGLDGAEHDV 12
+ G+DG +H+V
Sbjct: 34 RVGVDGTDHEV 44


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 6 DGAEHDVP 13
DG+ HD+P
Sbjct: 187 DGSYHDLP 194




THE END