DJC13_HUMAN Blast Output
Archaea
1|Sequence|1|10|MNIIRENKDL

>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MNIIRENKDL 10
M REN+DL
Sbjct: 391 MKAFRENRDL 400


>sp|Y1257_METJA|UNCHARACTERIZED protein MJ1257|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MNIIRENKD 9
+NII+ENK+
Sbjct: 50 LNIIKENKN 58


>sp|DPHB_THEON|DIPHTHINE synthase|Thermococcus onnurineus (strain NA1)

Query: 2 NIIRENKD 9
++IRENK+
Sbjct: 150 DVIRENKE 157


>sp|MV3K_THEAC|MEVALONATE 3-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MNIIREN 7
+N+IREN
Sbjct: 247 VNVIREN 253


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 MNIIRENKDL 10
+ +IREN DL
Sbjct: 4 IKLIRENPDL 13


>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 MNIIRENKDL 10
+ +IREN DL
Sbjct: 4 IKLIRENPDL 13


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 2 NIIRENKD 9
NII+ENK+
Sbjct: 628 NIIKENKE 635


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 IIRENKDL 10
+I ENKD+
Sbjct: 33 VIEENKDI 40


>sp|RSMA_METST|PROBABLE ribosomal RNA small subunit|Methanosphaera stadtmanae (strain

Query: 1 MNIIRENKDL 10
+NII EN D+
Sbjct: 30 LNIILENADI 39




2|Sequence|6|15|ENKDLACFYT

>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ENKDLACF 8
ENKD+AC+
Sbjct: 282 ENKDVACW 289


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 4 DLACFY 9
DLAC Y
Sbjct: 285 DLACLY 290


>sp|AATB_METM7|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C7 /

Query: 4 DLACFY 9
DLAC Y
Sbjct: 285 DLACLY 290


>sp|AATB_METM6|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C6 /

Query: 4 DLACFY 9
DLAC Y
Sbjct: 285 DLACLY 290


>sp|AATB_METM5|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C5 /

Query: 4 DLACFY 9
DLAC Y
Sbjct: 285 DLACLY 290


>sp|EPPA_METTH|PREPILIN peptidase EppA|Methanothermobacter thermautotrophicus (strain

Query: 5 LACFY 9
LACFY
Sbjct: 16 LACFY 20


>sp|Y1870_ARCFU|UNCHARACTERIZED protein AF_1870|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NKDLACFY 9
+KDLA FY
Sbjct: 35 SKDLAVFY 42


>sp|AATB_METB6|A-TYPE ATP synthase subunit B|Methanoregula boonei (strain DSM 21154

Query: 4 DLACFY 9
DLAC Y
Sbjct: 278 DLACIY 283


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 2 NKDLACFY 9
NKD A FY
Sbjct: 143 NKDYAGFY 150


>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 1 ENKDLACFY 9
+N+D+A FY
Sbjct: 42 KNEDIAQFY 50


>sp|Y1408_METJA|UNCHARACTERIZED protein MJ1408|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENKDLAC 7
ENK+L C
Sbjct: 344 ENKELEC 350


>sp|RL18_METS5|LARGE ribosomal subunit protein uL18|Metallosphaera sedula (strain ATCC

Query: 1 ENKDLACFYT 10
EN AC+ T
Sbjct: 76 ENNSTACYLT 85


>sp|Y351_METJA|UNCHARACTERIZED protein MJ0351|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KDLACFY 9
KD+ C+Y
Sbjct: 107 KDVQCYY 113




3|Sequence|11|20|ACFYTTKHSW

>sp|GCSH_KORCO|PROBABLE glycine cleavage system H|Korarchaeum cryptofilum (strain OPF8)

Query: 3 FYTTKHSW 10
FYT H W
Sbjct: 8 FYTKTHEW 15


>sp|GCSH_PYRFU|PROBABLE glycine cleavage system H|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FYTTKHSW 10
+YT +H W
Sbjct: 14 YYTKEHEW 21


>sp|GCSH_PYRAB|PROBABLE glycine cleavage system H|Pyrococcus abyssi (strain GE5 /

Query: 3 FYTTKHSW 10
+YT +H W
Sbjct: 14 YYTKEHEW 21


>sp|Y1361_METJA|UNCHARACTERIZED protein MJ1361|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CFYTTKHSW 10
C+Y +K+ W
Sbjct: 67 CYYWSKYLW 75


>sp|GCSH_PICTO|PROBABLE glycine cleavage system H|Picrophilus torridus (strain ATCC

Query: 3 FYTTKHSW 10
+YT H W
Sbjct: 9 YYTKSHEW 16


>sp|GCSH_THEKO|PROBABLE glycine cleavage system H|Thermococcus kodakarensis (strain ATCC

Query: 3 FYTTKHSW 10
+YT H W
Sbjct: 14 YYTKDHEW 21


>sp|GCSH_THEGJ|PROBABLE glycine cleavage system H|Thermococcus gammatolerans (strain DSM

Query: 3 FYTTKHSW 10
+YT H W
Sbjct: 14 YYTKDHEW 21


>sp|GCSH_PYRHO|PROBABLE glycine cleavage system H|Pyrococcus horikoshii (strain ATCC

Query: 3 FYTTKHSW 10
+YT H W
Sbjct: 14 YYTKDHEW 21


>sp|TRPA_METKA|TRYPTOPHAN synthase alpha chain|Methanopyrus kandleri (strain AV19 /

Query: 2 CFYTTKHS 9
C+Y T H+
Sbjct: 100 CYYNTLHA 107




4|Sequence|16|25|TKHSWRGKYK

>sp|COMDE_METAC|SULFOPYRUVATE decarboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 SWRGKYK 10
SWRG YK
Sbjct: 98 SWRGVYK 104


>sp|Y3226_SACS2|UNCHARACTERIZED aldolase SSO3226|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TKHSWRGKYK 10
T + WR KYK
Sbjct: 80 TANVWRQKYK 89


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KHSWRGKYK 10
KHS RG Y+
Sbjct: 228 KHSLRGLYR 236


>sp|Y033_METJA|UNCHARACTERIZED FAD-dependent oxidoreductase MJ0033|Methanocaldococcus jannaschii

Query: 1 TKHSWRG 7
TK WRG
Sbjct: 509 TKEEWRG 515


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 2 KHSWRGKYK 10
KH WR + K
Sbjct: 286 KHVWRAQEK 294


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TKHSWRG 7
T H WRG
Sbjct: 319 TPHIWRG 325


>sp|ARLY_METMJ|ARGININOSUCCINATE lyase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TKHSWRG 7
T H WRG
Sbjct: 327 TPHLWRG 333


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 HSWRGKY 9
HS+RG Y
Sbjct: 332 HSYRGDY 338


>sp|GAL1_PYRFU|GALACTOKINASE furiosus (strain ATCC 43587

Query: 2 KHSWRGKY 9
K SW+ KY
Sbjct: 334 KFSWKAKY 341


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 1 TKHSWRGKY 9
+K W GKY
Sbjct: 107 SKDEWLGKY 115


>sp|DAPF_METTP|DIAMINOPIMELATE epimerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KHSWRGKY 9
KH+W Y
Sbjct: 86 KHAWESGY 93


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TKHSWRGKY 9
+K W GKY
Sbjct: 107 SKDEWLGKY 115


>sp|RIO2_ARCFU|RIO-TYPE serine/threonine-protein kinase Rio2|Archaeoglobus fulgidus

Query: 2 KHSWR 6
KHSWR
Sbjct: 12 KHSWR 16


>sp|LYSJ_PYRAB|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 4 SWRGKYK 10
+W+ KYK
Sbjct: 128 TWKSKYK 134


>sp|IF2P_STAMF|PROBABLE translation initiation factor IF-2|Staphylothermus marinus (strain

Query: 3 HSWRGKYK 10
H W KYK
Sbjct: 568 HLWLTKYK 575


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 4 SWRGKYK 10
+W G+YK
Sbjct: 155 TWTGQYK 161


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HSWRGKY 9
H W GK+
Sbjct: 120 HDWIGKF 126


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 KHSWRGK 8
KH W GK
Sbjct: 416 KHYWVGK 422


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 KHSWRGK 8
KH W GK
Sbjct: 416 KHYWVGK 422


>sp|TRUD_META3|PROBABLE tRNA pseudouridine synthase D|Methanococcus aeolicus (strain ATCC

Query: 2 KHSWRGKY 9
KH W G +
Sbjct: 50 KHDWNGSF 57


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 KHSWRGK 8
KH W GK
Sbjct: 416 KHYWVGK 422


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KHSWRGK 8
KH W GK
Sbjct: 416 KHYWVGK 422


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KHSWRGK 8
KH W GK
Sbjct: 414 KHYWVGK 420


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KHSWRGK 8
KH W GK
Sbjct: 416 KHYWVGK 422




5|Sequence|21|30|RGKYKRVFSV

>sp|WTPC_METJA|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Methanocaldococcus jannaschii

Query: 2 GKYKRVF 8
GKYK+VF
Sbjct: 258 GKYKKVF 264


>sp|FSX1_UNCAX|FUSEXIN 1|Uncultured archaeon

Query: 2 GKYKRVFSV 10
G+Y R +SV
Sbjct: 136 GRYSRYYSV 144


>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 2 GKYKRVFSV 10
G YKR FS+
Sbjct: 197 GLYKRGFSI 205


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RGKYKRVFS 9
R KYK +FS
Sbjct: 272 REKYKMLFS 280


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GKYKRV 7
GKYKR+
Sbjct: 101 GKYKRI 106


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RGKYKRVF 8
RG+YK V+
Sbjct: 194 RGEYKEVY 201


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KYKRVFSV 10
KYKRV+++
Sbjct: 274 KYKRVYTI 281


>sp|AROD_PYRFU|3-DEHYDROQUINATE dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RGKYKRVFS 9
+GK R+FS
Sbjct: 173 KGKISRIFS 181




6|Sequence|26|35|RVFSVGTHAI

>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 1 RVFSVGTHA 9
RV+ +G HA
Sbjct: 113 RVYGLGQHA 121


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VFSVGTHAI 10
VF+ G HA+
Sbjct: 732 VFTTGMHAL 740


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VFSVGTHAI 10
VF+ G HA+
Sbjct: 732 VFTTGMHAL 740


>sp|KPRS1_ARCFU|RIBOSE-PHOSPHATE pyrophosphokinase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RVFSVGTHAI 10
RVF THAI
Sbjct: 234 RVFVACTHAI 243


>sp|MDH_METMP|MALATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RVFSVGTH 8
+VF +GTH
Sbjct: 142 QVFGLGTH 149


>sp|CCA_HALSA|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 700922

Query: 4 SVGTHA 9
SVGTHA
Sbjct: 358 SVGTHA 363


>sp|CCA_HALS3|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 29341

Query: 4 SVGTHA 9
SVGTHA
Sbjct: 358 SVGTHA 363


>sp|KPRS_PYRHO|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RVFSVGTHAI 10
+VF V TH +
Sbjct: 234 KVFVVATHGV 243


>sp|MDH_METJA|L-MALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVFSVGTH 8
+VF +GTH
Sbjct: 142 QVFGLGTH 149


>sp|MDH_METTH|MALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RVFSVGTH 8
RVF +G H
Sbjct: 141 RVFGLGNH 148


>sp|MDH_METTM|MALATE dehydrogenase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 RVFSVGTH 8
RVF +G H
Sbjct: 141 RVFGLGNH 148


>sp|KAE1B_METMJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 RVFSVGTH 8
VFS+G H
Sbjct: 329 EVFSIGPH 336


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 FSVGTHAI 10
F++GTH I
Sbjct: 341 FALGTHEI 348


>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FSVGTHAI 10
F++GTH I
Sbjct: 341 FALGTHEI 348




7|Sequence|31|40|GTHAITTYNP

>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 HAITTYNP 10
HAIT Y+P
Sbjct: 43 HAITLYDP 50


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 1 GTHAITTYNP 10
GT I TY+P
Sbjct: 450 GTQLIDTYDP 459


>sp|FDHD_SACS2|SULFUR carrier protein FdhD|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GTHAITTYNP 10
G HA +NP
Sbjct: 149 GLHATALFNP 158


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 3 HAITTYNP 10
HAI TY P
Sbjct: 70 HAIDTYLP 77


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain

Query: 3 HAITTYNP 10
HAI TY P
Sbjct: 70 HAIDTYLP 77


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 3 HAITTYNP 10
HAI TY P
Sbjct: 70 HAIDTYLP 77


>sp|KCY_HALMA|CYTIDYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 3 HAITTYNP 10
HA+ +Y+P
Sbjct: 169 HAVESYSP 176


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HAITTYNP 10
H I TY+P
Sbjct: 501 HPIDTYSP 508


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 3 HAITTYNP 10
H I TY+P
Sbjct: 501 HPIDTYSP 508


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 1 GTHAITTYNP 10
G H I Y+P
Sbjct: 370 GPHVIRAYDP 379


>sp|YNI2_METTL|UNCHARACTERIZED protein in nifH2 3'region|Methanothermococcus

Query: 1 GTHAITTYN 9
G HAIT N
Sbjct: 51 GVHAITMLN 59


>sp|RS2_SACS2|SMALL ribosomal subunit protein uS2|Saccharolobus solfataricus (strain

Query: 1 GTHAITTY 8
GTH+ T Y
Sbjct: 50 GTHSCTKY 57


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 GTHAITTYNP 10
G HA T Y P
Sbjct: 413 GMHAPTVYFP 422


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GTHAITTYN 9
G H TTYN
Sbjct: 234 GDHFSTTYN 242




8|Sequence|36|45|TTYNPNTLEV

>sp|LPLA_AERPE|PUTATIVE lipoate-protein ligase A|Aeropyrum pernix (strain ATCC 700893

Query: 3 YNPNTLE 9
YNPN+LE
Sbjct: 179 YNPNSLE 185


>sp|NRPR1_METMA|GLOBAL nitrogen regulator NrpRI|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TTYNPNT 7
TTYNP T
Sbjct: 99 TTYNPET 105


>sp|CDVA_SULAC|CELL division protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TYNPNTLEV 10
TY+PN+++V
Sbjct: 51 TYSPNSVKV 59


>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 NPNTLEV 10
NP+TLE+
Sbjct: 287 NPDTLEI 293


>sp|RIFK_METAR|RIBOFLAVIN kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 TTYNPNTLEV 10
T+Y PN +E+
Sbjct: 182 TSYPPNLIEI 191


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YNPNTLEV 10
Y PNTL++
Sbjct: 324 YPPNTLKI 331


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 3 YNPNTLEV 10
YNPN E+
Sbjct: 558 YNPNIEEI 565


>sp|RS15_METMJ|SMALL ribosomal subunit protein uS15|Methanoculleus marisnigri (strain

Query: 2 TYNPNTLEV 10
TY P T E+
Sbjct: 140 TYKPETAEI 148


>sp|ARLY_METLZ|ARGININOSUCCINATE lyase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 NPNTLEV 10
NP+TLE+
Sbjct: 287 NPDTLEI 293


>sp|COBQ_METB6|PROBABLE cobyric acid synthase|Methanoregula boonei (strain DSM 21154

Query: 2 TYNPNTLEV 10
TY+ NT++V
Sbjct: 361 TYSKNTMQV 369


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 3 YNPNTLEV 10
YNP+T EV
Sbjct: 21 YNPSTGEV 28


>sp|HIS7_METVS|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 3 YNPNTLEV 10
YNPNT ++
Sbjct: 117 YNPNTEKI 124


>sp|SERK_DESA1|ATP-DEPENDENT L-serine kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 YNPNTL 8
Y+PNTL
Sbjct: 135 YDPNTL 140




9|Sequence|41|50|NTLEVTNQWP

>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 NTLEVTNQWP 10
NT VT WP
Sbjct: 862 NTFVVTEPWP 871


>sp|HIS4_ARCFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Archaeoglobus fulgidus (strain

Query: 1 NTLEVTNQW 9
N +EV QW
Sbjct: 32 NPIEVAKQW 40


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 EVTNQWP 10
++TNQ+P
Sbjct: 289 DITNQYP 295


>sp|HIS4_META3|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus aeolicus (strain

Query: 1 NTLEVTNQW 9
N LEV +W
Sbjct: 31 NPLEVAEKW 39


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC

Query: 3 LEVTNQW 9
LEV N W
Sbjct: 3 LEVNNMW 9




10|Sequence|46|55|TNQWPYGDIC

>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 1 TNQWPYGDIC 10
+ +WP GD C
Sbjct: 128 SKRWPSGDWC 137


>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 1 TNQWPYGDIC 10
+ +WP GD C
Sbjct: 128 SKRWPSGDWC 137


>sp|KCY_PYRIL|CYTIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 PYGDIC 10
PY DIC
Sbjct: 90 PYADIC 95


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 TNQWPYGD 8
T WP+GD
Sbjct: 283 TKVWPHGD 290


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NQWPYGDI 9
N+W YG+I
Sbjct: 145 NRWKYGNI 152


>sp|DOXA_ACIAM|THIOSULFATE dehydrogenase [quinone] small subunit|Acidianus ambivalens

Query: 1 TNQWPYGDIC 10
T QW YG++
Sbjct: 22 TGQWAYGNVV 31


>sp|KCY_PYRNV|CYTIDYLATE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 PYGDIC 10
PY D+C
Sbjct: 90 PYADVC 95


>sp|KCY_PYRCJ|CYTIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 PYGDIC 10
PY D+C
Sbjct: 90 PYADVC 95


>sp|KCY_PYRAR|CYTIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 PYGDIC 10
PY D+C
Sbjct: 90 PYADVC 95


>sp|KCY_PYRAE|CYTIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 PYGDIC 10
PY D+C
Sbjct: 90 PYADVC 95


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WPYGDI 9
WPY D+
Sbjct: 73 WPYEDV 78


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 QWPYGDI 9
+WP GDI
Sbjct: 792 KWPAGDI 798


>sp|RL18_KORCO|LARGE ribosomal subunit protein uL18|Korarchaeum cryptofilum (strain

Query: 4 WPYG 7
WPYG
Sbjct: 72 WPYG 75


>sp|CRUF_HALJT|BISANHYDROBACTERIORUBERIN hydratase|Haloarcula japonica (strain ATCC 49778

Query: 4 WPYGD 8
WPYG+
Sbjct: 113 WPYGE 117


>sp|NDK_THEVO|NUCLEOSIDE diphosphate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 QWPYGD 8
+W YGD
Sbjct: 138 EWAYGD 143


>sp|NDK_THEAC|NUCLEOSIDE diphosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 QWPYGD 8
+W YGD
Sbjct: 139 EWSYGD 144


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 5 PYGDI 9
PYGDI
Sbjct: 128 PYGDI 132


>sp|ARGD_METTH|ACETYLORNITHINE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 5 PYGDI 9
PYGDI
Sbjct: 163 PYGDI 167


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 3 QWPYGD 8
+WP+G+
Sbjct: 21 KWPFGE 26


>sp|TMPS_METJA|THYMIDYLATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QWPYGDIC 10
+ P GDIC
Sbjct: 85 ELPEGDIC 92


>sp|GFCR_HALWD|TRANSCRIPTIONAL regulator GfcR|Haloquadratum walsbyi (strain DSM 16790

Query: 2 NQWPYGDI 9
+QW GDI
Sbjct: 127 HQWDEGDI 134


>sp|GFCR_HALLT|TRANSCRIPTIONAL regulator GfcR|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 NQWPYGDI 9
+QW GDI
Sbjct: 125 HQWDEGDI 132


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TNQWPY 6
T+ WPY
Sbjct: 6 TSAWPY 11


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TNQWPY 6
T+ WPY
Sbjct: 6 TSAWPY 11


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TNQWPY 6
T+ WPY
Sbjct: 7 TSAWPY 12




11|Sequence|51|60|YGDICSISPV

>sp|MCRW_METJA|METHYL-COENZYME M reductase II operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YGDICSISP 9
YGDI SI P
Sbjct: 139 YGDISSIDP 147


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGDICSISPV 10
YG C+I+PV
Sbjct: 605 YGCRCTITPV 614


>sp|TRMY_AERPE|TRNA (pseudouridine(54)-N(1))-methyltransferase|Aeropyrum pernix (strain

Query: 1 YGDICSISP 9
+G++CS SP
Sbjct: 125 WGEMCSSSP 133


>sp|AMT1_METJA|AMMONIUM transporter Amt1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DICSISPV 10
D+C+I PV
Sbjct: 301 DVCAIGPV 308


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 2 GDICSISPV 10
GD CSI V
Sbjct: 122 GDACSIESV 130


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 2 GDICSISPV 10
GD+CS+ +
Sbjct: 536 GDLCSVEKI 544


>sp|Y642_METJA|UNCHARACTERIZED protein MJ0642|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGDICSISP 9
YG+I +I+P
Sbjct: 105 YGEILNINP 113


>sp|TMG10_ARCFU|TRNA (guanine(10)-N2)-dimethyltransferase|Archaeoglobus fulgidus

Query: 3 DICSIS 8
DICS+S
Sbjct: 63 DICSVS 68


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GDICSISPV 10
GD+ I+PV
Sbjct: 196 GDVIEINPV 204


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YGDICSISP 9
YG++ ISP
Sbjct: 325 YGEVRDISP 333


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 YGDICSISP 9
YG++ ISP
Sbjct: 322 YGEVRDISP 330


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 1 YGDICSISPV 10
YG C I PV
Sbjct: 577 YGQNCLIKPV 586


>sp|KVAP_AERPE|VOLTAGE-GATED potassium channel|Aeropyrum pernix (strain ATCC 700893

Query: 1 YGDICSISPV 10
YGD+ +P+
Sbjct: 212 YGDVVPATPI 221




12|Sequence|56|65|SISPVGKGQG

>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans (strain

Query: 1 SISPVGKGQG 10
SI+P+G G G
Sbjct: 197 SITPMGNGAG 206


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 1 SISPVGKGQG 10
SI+P+G G G
Sbjct: 197 SITPMGNGAG 206


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 1 SISPVGKGQG 10
SI+P+G G G
Sbjct: 197 SITPMGNGAG 206


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 ISPVGKGQG 10
+ PVG G+G
Sbjct: 50 VRPVGIGEG 58




13|Sequence|61|70|GKGQGTEFNL

>sp|Y1326_METJA|UNCHARACTERIZED GTP-binding protein MJ1326|Methanocaldococcus jannaschii (strain

Query: 1 GKGQGTE 7
GKG+GTE
Sbjct: 148 GKGRGTE 154


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GQGTEFNL 10
G+GT+F L
Sbjct: 39 GEGTQFQL 46


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 1 GKGQGTEFNL 10
GKG GT+ L
Sbjct: 474 GKGSGTQTTL 483


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 1 GKGQGTEFNL 10
G G+G FNL
Sbjct: 195 GSGEGEGFNL 204


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 GKGQGTEFNL 10
G GTE NL
Sbjct: 244 GVAHGTEMNL 253


>sp|RS7_AERPE|SMALL ribosomal subunit protein uS7|Aeropyrum pernix (strain ATCC

Query: 3 GQGTEFNL 10
GQGT F+L
Sbjct: 3 GQGTGFSL 10


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GKGQGTEFN 9
GKG EFN
Sbjct: 435 GKGDEYEFN 443


>sp|DTDA_PYRNV|D-AMINOACYL-TRNA deacylase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KGQGTEFN 9
KG+ T+FN
Sbjct: 46 KGEPTDFN 53


>sp|RL15E_METAR|LARGE ribosomal subunit protein eL15|Methanocella arvoryzae (strain DSM

Query: 2 KGQGTEFN 9
KG+GTE N
Sbjct: 177 KGKGTEKN 184


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 GKGQGTE 7
G+GQG+E
Sbjct: 132 GEGQGSE 138




14|Sequence|66|75|TEFNLTFRKG

>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 TEFNLTFRKG 10
T NLT RKG
Sbjct: 19 TNINLTIRKG 28


>sp|GPGS_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TEFNLTFRKG 10
TE N F KG
Sbjct: 165 TELNFFFNKG 174




15|Sequence|71|80|TFRKGSGKKS

>sp|TRM10_SULAC|TRNA (adenine(9)-N1)-methyltransferase|Sulfolobus acidocaldarius

Query: 1 TFRKGSGKKS 10
TFRKG K S
Sbjct: 72 TFRKGGKKVS 81


>sp|BAX1_ARCFU|ENDONUCLEASE Bax1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FRKGSGKK 9
F+KG GKK
Sbjct: 36 FKKGLGKK 43




16|Sequence|76|85|SGKKSETLKF

>sp|IPYR_METTH|INORGANIC pyrophosphatase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GKKSETL 8
GKK+ETL
Sbjct: 145 GKKTETL 151


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 GKKSETLKF 10
GK+SE ++F
Sbjct: 377 GKRSERVRF 385


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SGKKSETLK 9
+GKK+E+LK
Sbjct: 229 TGKKTESLK 237




17|Sequence|81|90|ETLKFSTEHR

>sp|TRMY_METAR|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocella arvoryzae

Query: 2 TLKFSTEH 9
T+KFS EH
Sbjct: 65 TIKFSGEH 72


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ETLKFSTEH 9
ETL+++ EH
Sbjct: 308 ETLRYAAEH 316


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 2 TLKFSTEHR 10
T+K TEHR
Sbjct: 135 TVKSGTEHR 143


>sp|RNZ_HALVD|RIBONUCLEASE Z|Haloferax volcanii (strain ATCC 29605

Query: 1 ETLKFSTEHR 10
E F TEHR
Sbjct: 131 EVRAFDTEHR 140




18|Sequence|86|95|STEHRTELLT

>sp|MCT_HALMA|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 EHRTELL 9
EH+TELL
Sbjct: 374 EHKTELL 380


>sp|MCT_HALHT|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula hispanica (strain ATCC 33960

Query: 3 EHRTELL 9
EHR ELL
Sbjct: 374 EHRAELL 380


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 3 EHRTELLT 10
EHR ELL+
Sbjct: 454 EHREELLS 461


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 3 EHRTELL 9
EHR ELL
Sbjct: 450 EHRKELL 456




19|Sequence|91|100|TELLTEALRF

>sp|PFDA_METLZ|PREFOLDIN subunit alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 ELLTEALRF 10
ELLT+ LRF
Sbjct: 29 ELLTQQLRF 37


>sp|GGPS_SULAC|GERANYLGERANYL diphosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ELLTEALR 9
+LLT+ALR
Sbjct: 119 QLLTQALR 126




20|Sequence|96|105|EALRFRTDFS

>sp|KTHY_METHJ|PROBABLE thymidylate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EALRFRTD 8
EA+RFR D
Sbjct: 190 EAIRFRFD 197


>sp|COXX_METS5|PROTOHEME IX farnesyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 ALRFRTDFS 10
AL+F+ D+S
Sbjct: 184 ALKFKEDYS 192


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 EALRFRTD 8
E LRFRT+
Sbjct: 355 EELRFRTE 362


>sp|Y1003_ARCFU|UNCHARACTERIZED protein AF_1003|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LRFRTDF 9
LRFR DF
Sbjct: 205 LRFRADF 211




21|Sequence|101|110|RTDFSEGKIT

>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 RTDFSEGKI 9
+ DF+EGK+
Sbjct: 326 KKDFAEGKL 334


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RTDFSEGKI 9
+ DF+EGK+
Sbjct: 326 KRDFAEGKL 334


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 RTDFSEGKI 9
+ DF+EGK+
Sbjct: 326 KRDFAEGKL 334


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RTDFSEGKI 9
+ DF+EGK+
Sbjct: 326 KKDFAEGKL 334


>sp|AAT_METJA|PROBABLE aspartate aminotransferase|Methanocaldococcus jannaschii (strain

Query: 2 TDFSEGKI 9
T+F+EGKI
Sbjct: 124 TEFAEGKI 131


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RTDFSEGKI 9
+ DF+EGK+
Sbjct: 326 KRDFAEGKL 334


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 RTDFSEGKI 9
+ DF+EGK+
Sbjct: 326 KRDFAEGKL 334


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RTDFSEGKI 9
+ DF+EGK+
Sbjct: 326 KRDFAEGKL 334


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 DFSEGKI 9
DFS+GK+
Sbjct: 354 DFSQGKV 360


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DFSEGKI 9
DFS+GK+
Sbjct: 354 DFSQGKV 360


>sp|KPTA2_ARCFU|PROBABLE RNA 2'-phosphotransferase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 RTDFSEG 7
RTD+SEG
Sbjct: 108 RTDWSEG 114


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DFSEGKI 9
DF EGKI
Sbjct: 365 DFREGKI 371


>sp|PYRB_PYRAR|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum arsenaticum

Query: 1 RTDFSEGKI 9
R DF +GKI
Sbjct: 35 RVDFLKGKI 43


>sp|FEN_METS3|FLAP endonuclease 1|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 TDFSEG 7
TDFSEG
Sbjct: 225 TDFSEG 230


>sp|COBQ_METM5|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C5 /

Query: 3 DFSEGKI 9
DFSEG I
Sbjct: 344 DFSEGDI 350


>sp|IDSA_METTH|SHORT chain isoprenyl diphosphate synthase|Methanothermobacter

Query: 2 TDFSEGKIT 10
+D +EGK+T
Sbjct: 232 SDIAEGKMT 240




22|Sequence|106|115|EGKITGRRYN

>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 1 EGKITGRRY 9
+GK+ GRRY
Sbjct: 210 KGKMRGRRY 218


>sp|PGK2_METFV|2-PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 1 EGKITGRRY 9
EGK+ G++Y
Sbjct: 5 EGKVAGKKY 13


>sp|RL4_SULAC|LARGE ribosomal subunit protein uL4|Sulfolobus acidocaldarius (strain

Query: 1 EGKITGRRY 9
+GK+ GRRY
Sbjct: 188 KGKMRGRRY 196


>sp|GGR_HALVD|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Haloferax volcanii (strain ATCC 29605

Query: 2 GKITGRRYN 10
G+I G RYN
Sbjct: 126 GEIVGVRYN 134


>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 3 KITGRRYN 10
KITGR Y+
Sbjct: 406 KITGRTYS 413


>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GKITGRRY 9
GK++G RY
Sbjct: 239 GKMSGHRY 246


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 EGKITGRRY 9
EGK+ RRY
Sbjct: 272 EGKLDTRRY 280


>sp|RL4_AERPE|LARGE ribosomal subunit protein uL4|Aeropyrum pernix (strain ATCC 700893

Query: 1 EGKITGRRY 9
+GK+ GRRY
Sbjct: 195 KGKMRGRRY 203


>sp|RL4_SULTO|LARGE ribosomal subunit protein uL4|Sulfurisphaera tokodaii (strain DSM

Query: 1 EGKITGRRY 9
+GK+ GRRY
Sbjct: 188 KGKMRGRRY 196


>sp|MCH_METMJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GKITGRRY 9
G +TGRR+
Sbjct: 45 GYLTGRRF 52


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 1 EGKITGRRY 9
+GK+ GRRY
Sbjct: 183 KGKMRGRRY 191


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 1 EGKITGRRY 9
+GK+ GRRY
Sbjct: 183 KGKMRGRRY 191


>sp|RL4_METTP|LARGE ribosomal subunit protein uL4|Methanothrix thermoacetophila (strain

Query: 1 EGKITGRRY 9
+GKI GRR+
Sbjct: 180 KGKIRGRRF 188


>sp|QUEE_METJA|7-CARBOXY-7-DEAZAGUANINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGKITGRRY 9
EGK GRR+
Sbjct: 12 EGKYIGRRF 20


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain NA1)

Query: 1 EGKITGRRY 9
+GK+ GRRY
Sbjct: 183 KGKMRGRRY 191


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 1 EGKITGRRY 9
+GK+ GRRY
Sbjct: 183 KGKMRGRRY 191


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 1 EGKITGRRY 9
+GK+ GRRY
Sbjct: 183 KGKMRGRRY 191


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 EGKITGRRY 9
+GK+ GRRY
Sbjct: 183 KGKMRGRRY 191


>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 1 EGKITGRRY 9
+GK+ GRRY
Sbjct: 183 KGKMRGRRY 191


>sp|PELO_PYRFU|PROTEIN pelota homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 4 ITGRRYN 10
I+G+RYN
Sbjct: 166 ISGKRYN 172


>sp|RL4_SACI6|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 EGKITGRRY 9
+GK+ GR+Y
Sbjct: 189 KGKMRGRKY 197


>sp|RL4_SACI4|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 EGKITGRRY 9
+GK+ GR+Y
Sbjct: 189 KGKMRGRKY 197


>sp|RL4_SACI3|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 EGKITGRRY 9
+GK+ GR+Y
Sbjct: 189 KGKMRGRKY 197


>sp|ACDD_METKA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanopyrus kandleri

Query: 1 EGKITGRRY 9
EG++TG Y
Sbjct: 386 EGRVTGDAY 394


>sp|ARCH_SACS2|PROTEIN archease|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EGKITGRRYN 10
EGK G R+N
Sbjct: 95 EGKAWGERFN 104


>sp|RL4_SACI7|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 EGKITGRRY 9
+GK+ GR+Y
Sbjct: 189 KGKMRGRKY 197


>sp|RL4_SACI1|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 EGKITGRRY 9
+GK+ GR+Y
Sbjct: 189 KGKMRGRKY 197


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 4 ITGRRY 9
ITGRRY
Sbjct: 459 ITGRRY 464


>sp|RL4_THEAC|LARGE ribosomal subunit protein uL4|Thermoplasma acidophilum (strain ATCC

Query: 2 GKITGRRY 9
GK+ GRRY
Sbjct: 185 GKMRGRRY 192


>sp|RL4_SACI2|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 EGKITGRRY 9
+GK+ GR+Y
Sbjct: 189 KGKMRGRKY 197


>sp|RL4_ARCFU|LARGE ribosomal subunit protein uL4|Archaeoglobus fulgidus (strain ATCC

Query: 2 GKITGRRY 9
GK+ GRRY
Sbjct: 181 GKMRGRRY 188


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 1 EGKITGRR 8
EGK+ G+R
Sbjct: 85 EGKLKGKR 92


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGKITGRRYN 10
+GKI+G Y+
Sbjct: 450 KGKISGEEYH 459


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EGKITGRRYN 10
+GKI+G Y+
Sbjct: 446 KGKISGEEYH 455


>sp|RL4_METB6|LARGE ribosomal subunit protein uL4|Methanoregula boonei (strain DSM

Query: 2 GKITGRRY 9
GK+ GRRY
Sbjct: 181 GKLRGRRY 188


>sp|RL4_METHJ|LARGE ribosomal subunit protein uL4|Methanospirillum hungatei JF-1

Query: 2 GKITGRRY 9
GK+ GRRY
Sbjct: 181 GKLRGRRY 188


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EGKITGRRY 9
EGKI RY
Sbjct: 354 EGKIAATRY 362


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EGKITGRR 8
EGK +GR+
Sbjct: 422 EGKFSGRK 429


>sp|RL4_SACS2|LARGE ribosomal subunit protein uL4|Saccharolobus solfataricus (strain

Query: 1 EGKITGRRY 9
+GK+ GR+Y
Sbjct: 189 KGKMRGRKY 197


>sp|RTCA_METTH|RNA 3'-terminal phosphate cyclase|Methanothermobacter

Query: 3 KITGRRY 9
KITGRR+
Sbjct: 316 KITGRRF 322


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EGKITGRR 8
EGK +GR+
Sbjct: 422 EGKFSGRK 429


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 EGKITGRRY 9
EGKI RY
Sbjct: 350 EGKIIAARY 358


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 EGKITGRR 8
EGK +GR+
Sbjct: 437 EGKFSGRK 444


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 EGKITGRR 8
EGK +GR+
Sbjct: 422 EGKFSGRK 429


>sp|RL4_METJA|LARGE ribosomal subunit protein uL4|Methanocaldococcus jannaschii (strain

Query: 1 EGKITGRRY 9
+GK+ GR+Y
Sbjct: 180 KGKMRGRKY 188




23|Sequence|111|120|GRRYNCYKHH

>sp|FDHD_METTH|SULFUR carrier protein FdhD|Methanothermobacter thermautotrophicus (strain

Query: 1 GRRYNCYKH 9
G+R+N Y H
Sbjct: 235 GKRFNIYSH 243


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RRYNCYKHH 10
RRY KHH
Sbjct: 595 RRYRIMKHH 603


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RRYNCYKHH 10
RRY KHH
Sbjct: 598 RRYRIMKHH 606


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GRRYNCYKHH 10
G++YN +K H
Sbjct: 414 GKKYNSFKGH 423


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RRYNCYKHH 10
RRY+ +HH
Sbjct: 579 RRYSIMRHH 587


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RRYNCYKHH 10
RRY +HH
Sbjct: 596 RRYRLMRHH 604


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 RRYNCYKHH 10
RRY +HH
Sbjct: 596 RRYRLMRHH 604


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 RRYNCYKHH 10
RRY +HH
Sbjct: 596 RRYRLMRHH 604


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 RRYNCYKHH 10
RRY +HH
Sbjct: 596 RRYRLMRHH 604


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 RRYNCYKHH 10
RRY +HH
Sbjct: 596 RRYRLMRHH 604


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 RRYNCYKHH 10
RRY +HH
Sbjct: 596 RRYRLMRHH 604


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 RRYNCYKHH 10
RRY +HH
Sbjct: 596 RRYRLMRHH 604


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 RRYNCYKHH 10
RRY +HH
Sbjct: 592 RRYRLMRHH 600


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 RRYNCYKHH 10
RRY +HH
Sbjct: 594 RRYRLMRHH 602


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 GRRYNCYKHH 10
GRRYN +H
Sbjct: 388 GRRYNTPDYH 397


>sp|SYK2_METMA|LYSINE--TRNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GRRYNCYKH 9
GR YN KH
Sbjct: 79 GRLYNIRKH 87


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GRRYNCYKH 9
GR YN KH
Sbjct: 79 GRLYNIRKH 87


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 GRRYNCYK 8
GRR NC +
Sbjct: 181 GRRVNCQR 188


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 5 NCYKH 9
NCY+H
Sbjct: 101 NCYRH 105


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 RRYNCYKHH 10
RR++ +HH
Sbjct: 600 RRFSLMRHH 608


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 GRRYNCYK 8
GRR NC +
Sbjct: 179 GRRTNCQR 186


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 GRRYNCYK 8
GRR NC +
Sbjct: 179 GRRKNCQR 186


>sp|CAS1_NANEQ|CRISPR-ASSOCIATED endonuclease Cas1|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 RYNCYK 8
RYNC K
Sbjct: 117 RYNCIK 122


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 4 YNCYKH 9
Y CYKH
Sbjct: 333 YYCYKH 338


>sp|RS7_NANEQ|SMALL ribosomal subunit protein uS7|Nanoarchaeum equitans (strain

Query: 1 GRRYNCYK 8
G++YN YK
Sbjct: 78 GKKYNAYK 85


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RYNCYKH 9
RY C KH
Sbjct: 466 RYKCPKH 472


>sp|RS7_THEVO|SMALL ribosomal subunit protein uS7|Thermoplasma volcanium (strain ATCC

Query: 1 GRRYNCYK 8
G++Y+ YK
Sbjct: 64 GKKYSAYK 71


>sp|RS7_THEAC|SMALL ribosomal subunit protein uS7|Thermoplasma acidophilum (strain

Query: 1 GRRYNCYK 8
G++Y+ YK
Sbjct: 64 GKKYSAYK 71


>sp|RL21_NANEQ|LARGE ribosomal subunit protein eL21|Nanoarchaeum equitans (strain

Query: 1 GRRYNCYK 8
G+R NCY+
Sbjct: 68 GKRGNCYE 75




24|Sequence|116|125|CYKHHWSDSR

>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 1 CYKHHWSD 8
C+K HW D
Sbjct: 19 CFKQHWED 26


>sp|RS12_NATPD|SMALL ribosomal subunit protein uS12|Natronomonas pharaonis (strain

Query: 3 KHHWSDS 9
KH WSDS
Sbjct: 17 KHRWSDS 23


>sp|HIS3_METKA|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 2 YKHHWSDSR 10
Y H+WS SR
Sbjct: 61 YAHYWSTSR 69


>sp|FEN_PICTO|FLAP endonuclease 1|Picrophilus torridus (strain ATCC 700027

Query: 1 CYKHHWSDSR 10
C KH++S+SR
Sbjct: 305 CGKHNFSESR 314


>sp|RS12_HALMO|SMALL ribosomal subunit protein uS12|Halococcus morrhuae (Micrococcus

Query: 4 HHWSDSR 10
H WSDS+
Sbjct: 18 HRWSDSK 24


>sp|RS12_HALMA|SMALL ribosomal subunit protein uS12|Haloarcula marismortui (strain

Query: 3 KHHWSDS 9
KH WSD+
Sbjct: 17 KHRWSDT 23


>sp|RL15_METST|LARGE ribosomal subunit protein uL15|Methanosphaera stadtmanae (strain

Query: 3 KHHWS 7
KHHW+
Sbjct: 41 KHHWT 45


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea

Query: 5 HWSDSR 10
HW+D+R
Sbjct: 69 HWNDTR 74


>sp|RL15_METTH|LARGE ribosomal subunit protein uL15|Methanothermobacter

Query: 2 YKHHWS 7
+KHHW+
Sbjct: 40 HKHHWT 45


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 4 HHWSDS 9
H WSDS
Sbjct: 646 HSWSDS 651


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YKHHWSDSR 10
+K H+SD R
Sbjct: 406 HKSHYSDGR 414


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 YKHHW 6
Y HHW
Sbjct: 207 YLHHW 211


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 2 YKHHW 6
Y HHW
Sbjct: 207 YLHHW 211


>sp|GATB_NATPD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Natronomonas pharaonis (strain ATCC

Query: 5 HWSDSR 10
HW +SR
Sbjct: 273 HWDESR 278


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 5 HWSDSR 10
HW +SR
Sbjct: 271 HWDESR 276


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CYKHHWS 7
C KH W+
Sbjct: 26 CGKHFWT 32


>sp|DPS_HALSA|DNA protection during starvation protein|Halobacterium salinarum

Query: 3 KHHWS 7
KHHW+
Sbjct: 50 KHHWN 54


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 KHHWS 7
KH+WS
Sbjct: 407 KHYWS 411


>sp|RS4_METAC|SMALL ribosomal subunit protein uS4|Methanosarcina acetivorans (strain

Query: 3 KHHWSDSR 10
KH W ++R
Sbjct: 15 KHPWQEAR 22


>sp|GFCR_HALMA|TRANSCRIPTIONAL regulator GfcR|Haloarcula marismortui (strain ATCC 43049

Query: 3 KHHWSD 8
KH W D
Sbjct: 123 KHQWDD 128


>sp|HIS3_SACS2|PHOSPHORIBOSYL-AMP cyclohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YKHHWSDSR 10
Y H WS SR
Sbjct: 18 YLHFWSLSR 26


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KHHWSDS 9
+HHW ++
Sbjct: 243 EHHWKET 249


>sp|HIS3_SULTO|PHOSPHORIBOSYL-AMP cyclohydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YKHHWSDSR 10
Y H WS SR
Sbjct: 55 YVHFWSLSR 63




25|Sequence|121|130|WSDSRKPVIL

>sp|Y745_METJA|UNCHARACTERIZED protein MJ0745|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DSRKPVIL 10
DSRKP++L
Sbjct: 114 DSRKPLVL 121


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 WSDSRKPVIL 10
WS +KP+IL
Sbjct: 32 WSRQKKPLIL 41


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 WSDSRKPV 8
W D+RKP+
Sbjct: 525 WGDARKPI 532


>sp|THIM_METVS|HYDROXYETHYLTHIAZOLE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 SDSRKPVIL 10
SD +KP+IL
Sbjct: 83 SDLKKPIIL 91


>sp|THIM_METM6|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 SDSRKPVIL 10
SD +KP+IL
Sbjct: 83 SDLKKPIIL 91


>sp|THIM_METM5|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 SDSRKPVIL 10
SD +KP+IL
Sbjct: 83 SDLKKPIIL 91


>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WSDSRKPVIL 10
W D R+ VIL
Sbjct: 33 WEDHREAVIL 42


>sp|RFCL_HALMA|REPLICATION factor C large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 WSDSRKPVIL 10
W D R+ VIL
Sbjct: 32 WDDHREAVIL 41


>sp|PDAD_PICTO|PYRUVOYL-DEPENDENT arginine decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 WSDSRKPVIL 10
W D+RK +L
Sbjct: 139 WDDTRKEYVL 148


>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 WSDSRKPV 8
W SR PV
Sbjct: 344 WGSSRNPV 351


>sp|THIM_METM7|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 SDSRKPVIL 10
+D +KP+IL
Sbjct: 83 TDLKKPIIL 91


>sp|IF2A_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain DSM

Query: 1 WSDSRKPVI 9
W D+ KP+I
Sbjct: 159 WLDALKPII 167


>sp|Y505_METJA|UNCHARACTERIZED protein MJ0505|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DSRKPVIL 10
D +KP+IL
Sbjct: 34 DEQKPIIL 41


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 3 DSRKPVIL 10
D+ KPV+L
Sbjct: 239 DTEKPVVL 246


>sp|SECY_HALVD|PROTEIN translocase subunit SecY|Haloferax volcanii (strain ATCC 29605

Query: 1 WSDSRKPVI 9
W D+ +PV+
Sbjct: 3 WKDAAEPVL 11


>sp|DNLI_THEVO|DNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WSDSRKP 7
W D +KP
Sbjct: 557 WRDDKKP 563


>sp|AATE_METAR|A-TYPE ATP synthase subunit E|Methanocella arvoryzae (strain DSM 22066

Query: 1 WSDSRKPV 8
W+ S KPV
Sbjct: 171 WTSSMKPV 178


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SDSRKPVIL 10
+DS KP+++
Sbjct: 7 TDSAKPIVI 15


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WSDSRKPVI 9
W D R P +
Sbjct: 365 WDDPRAPTV 373


>sp|RS8E_AERPE|SMALL ribosomal subunit protein eS8|Aeropyrum pernix (strain ATCC

Query: 1 WSDSRKP 7
W D +KP
Sbjct: 6 WRDKKKP 12


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WSDSRKPVI 9
W D R P I
Sbjct: 361 WDDPRLPTI 369


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WSDSRKPVI 9
W D R P I
Sbjct: 361 WDDPRLPTI 369




26|Sequence|126|135|KPVILEVTPG

>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KPVILEVTP 9
KPV+LEV P
Sbjct: 403 KPVLLEVIP 411


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KPVILEVTP 9
KPV+LE+ P
Sbjct: 396 KPVLLEILP 404


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KPVILEVTPG 10
+PV+ EVTP
Sbjct: 677 RPVLSEVTPA 686


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KPVILEVTP 9
KPV+LE+ P
Sbjct: 395 KPVLLEILP 403


>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PVILEVTPG 10
P+IL+V PG
Sbjct: 81 PIILDVDPG 89


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila (strain

Query: 1 KPVILEVTPG 10
+PV +E++PG
Sbjct: 423 QPVTVELSPG 432


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KPVILEVTPG 10
KP+++ V PG
Sbjct: 397 KPILVRVLPG 406


>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 1 KPVILEVTPG 10
KP IL + PG
Sbjct: 466 KPAILRIIPG 475


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KPVILEVTPG 10
KP+++ V PG
Sbjct: 396 KPILVRVLPG 405


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PVILEVTP 9
P+I EVTP
Sbjct: 444 PIIAEVTP 451


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 2 PVILEVTPG 10
PV+ E+TP
Sbjct: 508 PVMAEITPA 516


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KPVILEVTPG 10
KP+++ + PG
Sbjct: 397 KPILVRILPG 406


>sp|RSMA_PYRHO|PROBABLE ribosomal RNA small subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 VILEVTPG 10
VILEV PG
Sbjct: 45 VILEVGPG 52


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KPVILEVTPG 10
KP+++ + PG
Sbjct: 396 KPILVRILPG 405


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KPVILEV 7
KPVILEV
Sbjct: 433 KPVILEV 439


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 4 ILEVTPG 10
I+EVTPG
Sbjct: 422 IIEVTPG 428


>sp|Y822_METMA|UPF0235 protein MM_0822|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VILEVTPG 10
V +EVTPG
Sbjct: 19 VDIEVTPG 26


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 KPVILEVTPG 10
K ILE+ PG
Sbjct: 405 KDAILEILPG 414


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KPVILEVTPG 10
K ILE+ PG
Sbjct: 405 KDAILEILPG 414


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PVILEVTPG 10
P++ ++ PG
Sbjct: 295 PIVTDIAPG 303


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PVILEVTPG 10
P++ EVTP
Sbjct: 460 PIVAEVTPA 468


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PVILEVTPG 10
P++ EVTP
Sbjct: 460 PIVAEVTPA 468


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 KPVILEVTPG 10
K ILE+ PG
Sbjct: 405 KDAILEILPG 414


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 KPVILEVTPG 10
K ILE+ PG
Sbjct: 405 KDAILEILPG 414


>sp|RSMA_PYRAB|PROBABLE ribosomal RNA small subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 VILEVTPG 10
V+LEV PG
Sbjct: 45 VVLEVGPG 52


>sp|RSMA_THEON|PROBABLE ribosomal RNA small subunit|Thermococcus onnurineus (strain NA1)

Query: 1 KPVILEVTPG 10
+ V+LE+ PG
Sbjct: 43 RDVVLEIGPG 52


>sp|PYRDB_PYRAB|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus abyssi (strain GE5 /

Query: 1 KPVILEVTP 9
KPVI ++TP
Sbjct: 154 KPVIAKLTP 162


>sp|PYRDB_THEKO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermococcus kodakarensis

Query: 1 KPVILEVTP 9
KPVI ++TP
Sbjct: 158 KPVIAKLTP 166


>sp|PYRDB_PYRFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus furiosus (strain

Query: 1 KPVILEVTP 9
KPVI ++TP
Sbjct: 155 KPVIAKLTP 163


>sp|RSMA_PYRFU|PROBABLE ribosomal RNA small subunit|Pyrococcus furiosus (strain ATCC

Query: 3 VILEVTPG 10
V+LEV PG
Sbjct: 45 VVLEVGPG 52


>sp|PYRDB_PYRHO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus horikoshii (strain

Query: 1 KPVILEVTP 9
KPVI ++TP
Sbjct: 158 KPVIAKLTP 166


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 PVILEVTPG 10
P++ ++ PG
Sbjct: 295 PIVTDIAPG 303


>sp|COBS_HALWD|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PVILEVTP 9
PVIL +TP
Sbjct: 183 PVILALTP 190


>sp|DPCKG_HALLT|GTP-DEPENDENT dephospho-CoA kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 KPVILEVT 8
PVI+EVT
Sbjct: 117 DPVIIEVT 124


>sp|DNLI_METST|DNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KPVILEVTPG 10
KP++ +++PG
Sbjct: 228 KPMLAQLSPG 237




27|Sequence|131|140|EVTPGGFDQI

>sp|HEM1_PICTO|GLUTAMYL-TRNA reductase|Picrophilus torridus (strain ATCC 700027

Query: 3 TPGGFDQI 10
TP GFD+I
Sbjct: 17 TPEGFDKI 24


>sp|RLME_ARCFU|RIBOSOMAL RNA large subunit methyltransferase|Archaeoglobus fulgidus

Query: 3 TPGGFDQI 10
TPGG+ Q+
Sbjct: 47 TPGGWSQV 54


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 EVTPGGFDQ 9
E+TPG F++
Sbjct: 113 EITPGNFEK 121


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VTPGGFDQ 9
V P GFDQ
Sbjct: 198 VVPVGFDQ 205


>sp|IF2G_HALWD|TRANSLATION initiation factor 2 subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EVTPGGF 7
EVTPGG
Sbjct: 285 EVTPGGL 291


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VTPGGFDQ 9
V P GFDQ
Sbjct: 198 VVPVGFDQ 205


>sp|Y400_METKA|UPF0200 protein MK0400|Methanopyrus kandleri (strain AV19 /

Query: 4 PGGFDQI 10
PGGFD +
Sbjct: 186 PGGFDHL 192


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 4 PGGFDQI 10
PG FD++
Sbjct: 9 PGSFDEV 15


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EVTPGGF 7
EV PGG+
Sbjct: 201 EVAPGGY 207


>sp|AMT1_HALMT|AMMONIUM transporter Amt1|Haloferax mediterranei (strain ATCC 33500

Query: 3 TPGGFD 8
+PGGFD
Sbjct: 81 SPGGFD 86


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EVTPGGFDQI 10
++ PG FD I
Sbjct: 226 DIIPGYFDDI 235


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EVTPGGFDQI 10
++ PG FD I
Sbjct: 226 DIIPGYFDDI 235


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VTPGGFD 8
TPGG D
Sbjct: 132 ATPGGLD 138




28|Sequence|136|145|GFDQINPATN

>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 2 FDQINPAT 9
FDQI P T
Sbjct: 188 FDQIGPLT 195


>sp|GATA_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus vannielii (strain ATCC

Query: 2 FDQINPAT 9
FDQI P T
Sbjct: 186 FDQIGPLT 193


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 2 FDQINPAT 9
FDQI P T
Sbjct: 186 FDQIGPLT 193


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 2 FDQINPAT 9
FDQI P T
Sbjct: 186 FDQIGPLT 193


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 2 FDQINPAT 9
FDQI P T
Sbjct: 186 FDQIGPLT 193


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 2 FDQINPAT 9
FDQI P T
Sbjct: 186 FDQIGPLT 193


>sp|HACA_METAC|PROBABLE methanogen homoaconitase large subunit|Methanosarcina acetivorans

Query: 2 FDQINPATN 10
FD I PA N
Sbjct: 73 FDHIAPANN 81


>sp|GVPE_HALMT|TRANSCRIPTIONAL activator GvpE|Haloferax mediterranei (strain ATCC 33500

Query: 2 FDQINPATN 10
FD + PA N
Sbjct: 153 FDTVEPAVN 161


>sp|CAS5_ARCFU|CRISPR-ASSOCIATED protein Cas5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FDQINP 7
F+QINP
Sbjct: 189 FEQINP 194


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FDQINPATN 10
FD NP++N
Sbjct: 103 FDNPNPSSN 111


>sp|MOAA_METTH|PROBABLE GTP 3',8-cyclase|Methanothermobacter thermautotrophicus (strain

Query: 2 FDQINPAT 9
FD +NP T
Sbjct: 117 FDTLNPET 124


>sp|DEGLY_PYRFU|DEGLYCASE PfpI|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FDQINP 7
FD++NP
Sbjct: 54 FDEVNP 59


>sp|TRPCD_ARCFU|TRYPTOPHAN biosynthesis protein TrpCD|Archaeoglobus fulgidus (strain ATCC

Query: 1 GFDQINPATN 10
G D++NP ++
Sbjct: 435 GMDEVNPNSS 444


>sp|TRPD_PYRAB|ANTHRANILATE phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 GFDQINP 7
G D++NP
Sbjct: 213 GLDEVNP 219


>sp|PSB2_CENSY|PROTEASOME subunit beta 2|Cenarchaeum symbiosum (strain A)

Query: 1 GFDQINPA 8
GFD + PA
Sbjct: 115 GFDAVGPA 122


>sp|FEN_CENSY|FLAP endonuclease 1|Cenarchaeum symbiosum (strain A)

Query: 1 GFDQINPAT 9
GF++I P T
Sbjct: 241 GFERIGPKT 249


>sp|GGR2_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FDQINPAT 9
F+++NP T
Sbjct: 366 FEEVNPRT 373




29|Sequence|141|150|NPATNRVLCS

>sp|PYRF_METTE|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina thermophila

Query: 2 PATNRVLC 9
P TNR++C
Sbjct: 61 PNTNRLIC 68


>sp|PYRF_METMA|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina mazei (strain ATCC

Query: 2 PATNRVLC 9
P TNR++C
Sbjct: 67 PNTNRLIC 74


>sp|PYRF_METBF|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina barkeri (strain Fusaro

Query: 2 PATNRVLC 9
P TNR++C
Sbjct: 67 PNTNRLIC 74


>sp|PYRF_METAC|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina acetivorans (strain

Query: 2 PATNRVLC 9
P TNR++C
Sbjct: 67 PNTNRLIC 74


>sp|Y481_METJA|UNCHARACTERIZED protein MJ0481|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PATNRVLC 9
PATNR C
Sbjct: 91 PATNRTFC 98




30|Sequence|146|155|RVLCSYDYRN

>sp|REG8_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB04820|Pyrococcus abyssi

Query: 1 RVLCSYD 7
RV+C YD
Sbjct: 89 RVMCVYD 95


>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 4 CSYDYRN 10
CS DYR+
Sbjct: 26 CSTDYRD 32


>sp|HLY_HALMT|HALOLYSIN mediterranei (strain ATCC 33500

Query: 5 SYDYRN 10
SYDYR+
Sbjct: 473 SYDYRS 478


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 4 CSYDYRN 10
CS DY N
Sbjct: 30 CSTDYHN 36


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro

Query: 4 CSYDYRN 10
CS DY N
Sbjct: 30 CSTDYHN 36


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain

Query: 4 CSYDYRN 10
CS DY N
Sbjct: 30 CSTDYHN 36


>sp|NEP1_ARCFU|RIBOSOMAL RNA small subunit methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 RVLCSYD 7
RVLC Y+
Sbjct: 205 RVLCEYE 211


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LCSYDYRN 10
C +DYR+
Sbjct: 319 FCGFDYRD 326


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 SYDYRN 10
SYDY N
Sbjct: 165 SYDYNN 170


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LCSYDYRN 10
+ SYDY N
Sbjct: 1 MLSYDYEN 8


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RVLCSYDYRN 10
R+ C + Y N
Sbjct: 724 RIACDFKYSN 733




31|Sequence|151|160|YDYRNIEGFV

>sp|HIS3_METBU|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 3 YRNIEGFV 10
YRNIEG V
Sbjct: 102 YRNIEGDV 109


>sp|HIS3_METBF|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YRNIEGFV 10
YRN+EG V
Sbjct: 108 YRNLEGEV 115


>sp|Y1389_METJA|UNCHARACTERIZED protein MJ1389|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DYRNIEGFV 10
+ +N+EGFV
Sbjct: 22 NLKNVEGFV 30


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 DYRNIEGFV 10
+ +N+EGF+
Sbjct: 218 EVKNVEGFI 226


>sp|HIS3_PYRAE|PHOSPHORIBOSYL-AMP cyclohydrolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 YRNIEGFV 10
YR+IEG V
Sbjct: 21 YRHIEGTV 28


>sp|DHYS_AERPE|PROBABLE deoxyhypusine synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 YRNIEGFV 10
YR+I GF+
Sbjct: 22 YRDIHGFM 29


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YDYRNIEGFV 10
Y YR +EG V
Sbjct: 454 YAYREVEGRV 463


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 2 DYRNIEGFV 10
DY + GFV
Sbjct: 590 DYNQLTGFV 598


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 DYRNIEG 8
DY N+EG
Sbjct: 349 DYTNVEG 355


>sp|MOAE_HALVD|PROBABLE molybdopterin synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 YDYRNIEGF 9
YDY + GF
Sbjct: 77 YDYALLSGF 85




32|Sequence|156|165|IEGFVDLSDY

>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 1 IEGFVDLSD 9
+EGFVD+ D
Sbjct: 48 LEGFVDIED 56


>sp|KPTA_PYRAB|PROBABLE RNA 2'-phosphotransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 EGFVDLSDY 10
EGFVDL ++
Sbjct: 33 EGFVDLEEF 41


>sp|Y1571_AERPE|UNCHARACTERIZED protein APE_1571.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 IEGFVDLSD 9
+EG++DL D
Sbjct: 268 LEGYIDLED 276


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 1 IEGFVDLSD 9
IEGFV++ D
Sbjct: 63 IEGFVEIED 71


>sp|KPTA_PYRFU|PROBABLE RNA 2'-phosphotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EGFVDLSD 9
EGFV+L+D
Sbjct: 32 EGFVELAD 39


>sp|IF2A_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 IEGFVDLSDY 10
I G+VDL+ Y
Sbjct: 179 ITGYVDLTSY 188


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 1 IEGFVDLSDY 10
++ F D SDY
Sbjct: 81 VDKFTDFSDY 90


>sp|GLNA_METTH|GLUTAMINE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IEGFVDLSD 9
+EGFVD+++
Sbjct: 59 VEGFVDINE 67


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IEGFVDLSD 9
IEG VD+ D
Sbjct: 397 IEGLVDIVD 405


>sp|ARLY_METAR|ARGININOSUCCINATE lyase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GFVDLSD 9
GF++LSD
Sbjct: 268 GFIELSD 274


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 3 GFVDLSD 9
GF+DL D
Sbjct: 200 GFIDLED 206


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IEGFVDLS 8
+EGF+DL+
Sbjct: 49 LEGFLDLN 56


>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IEGFVDL 7
+EGF+DL
Sbjct: 52 LEGFLDL 58


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 VDLSDY 10
VDLSDY
Sbjct: 287 VDLSDY 292


>sp|IF2B_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 1 IEGFVDLSD 9
IE FVD+++
Sbjct: 48 IENFVDIAE 56


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 VDLSDY 10
VDLSDY
Sbjct: 287 VDLSDY 292


>sp|IF2B_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain

Query: 1 IEGFVDLSD 9
IE FVD+++
Sbjct: 48 IENFVDIAE 56


>sp|FPOB_METMA|F(420)H(2) dehydrogenase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IEGFVDLSD 9
I+GFV+L +
Sbjct: 164 IQGFVELQE 172


>sp|SYR_METAC|ARGININE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 VDLSDY 10
VDLSDY
Sbjct: 285 VDLSDY 290


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 1 IEGFVDLSD 9
+ GFVD+ D
Sbjct: 282 VRGFVDVRD 290


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EGFVDL 7
EGFVDL
Sbjct: 89 EGFVDL 94




33|Sequence|161|170|DLSDYQGGFC

>sp|APGM_META3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus aeolicus (strain ATCC

Query: 1 DLSDYQGGFC 10
+ S Y+GG C
Sbjct: 374 EFSTYKGGLC 383


>sp|Y151_ARCFU|UNCHARACTERIZED protein AF_0151|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LSDYQGGF 9
L D++GGF
Sbjct: 38 LEDFEGGF 45


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLSDYQGGF 9
DL DY+G F
Sbjct: 70 DLWDYRGNF 78


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 DYQGGFC 10
D++G FC
Sbjct: 228 DFEGAFC 234


>sp|Y1586_METKA|UPF0147 protein MK1586|Methanopyrus kandleri (strain AV19 /

Query: 1 DLSDYQGGF 9
DLSDY+ F
Sbjct: 15 DLSDYEEKF 23


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 LSDYQGGFC 10
LSDY FC
Sbjct: 420 LSDYTSLFC 428


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 LSDYQGGFC 10
LSDY FC
Sbjct: 420 LSDYTSLFC 428


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 LSDYQGGFC 10
LSDY FC
Sbjct: 420 LSDYTSLFC 428


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 LSDYQGGFC 10
LSDY FC
Sbjct: 420 LSDYTSLFC 428


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 LSDYQGGFC 10
LSDY FC
Sbjct: 420 LSDYTSLFC 428


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 LSDYQGGFC 10
LSDY FC
Sbjct: 420 LSDYTSLFC 428


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC

Query: 2 LSDYQGG 8
LSDY GG
Sbjct: 34 LSDYDGG 40


>sp|CSA1_THETK|CRISPR-ASSOCIATED exonuclease Csa1|Thermoproteus tenax (strain ATCC 35583

Query: 2 LSDYQGGFC 10
LSD+ G+C
Sbjct: 47 LSDFAYGYC 55


>sp|SUCC_HALLT|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halorubrum lacusprofundi (strain

Query: 1 DLSDYQGG 8
DL DY GG
Sbjct: 266 DLVDYYGG 273


>sp|TRM56_AERPE|TRNA (cytidine(56)-2'-O)-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 4 DYQGGF 9
DY GGF
Sbjct: 162 DYSGGF 167


>sp|SUCC_HALSA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halobacterium salinarum (strain

Query: 1 DLSDYQGG 8
DL DY GG
Sbjct: 266 DLVDYYGG 273


>sp|SUCC_HALS3|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halobacterium salinarum (strain

Query: 1 DLSDYQGG 8
DL DY GG
Sbjct: 266 DLVDYYGG 273


>sp|Y829_ARCFU|UNCHARACTERIZED protein AF_0829|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LSDYQGGFC 10
LSD G +C
Sbjct: 50 LSDESGAYC 58


>sp|Y158_METJA|UPF0425 pyridoxal phosphate-dependent protein MJ0158|Methanocaldococcus

Query: 1 DLSDYQGGF 9
DLS GGF
Sbjct: 32 DLSGLSGGF 40




34|Sequence|166|175|QGGFCILYGG

>sp|MCH_METKA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 5 CILYGG 10
CILYGG
Sbjct: 229 CILYGG 234


>sp|RNZ_METJA|RIBONUCLEASE Z|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GFCILYGG 10
GFC+ Y G
Sbjct: 205 GFCLAYSG 212


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 QGGFCILYG 9
+GG ILYG
Sbjct: 370 RGGLMILYG 378


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 1 QGGFC 5
QGGFC
Sbjct: 472 QGGFC 476


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QGGFCILYG 9
+GG +LYG
Sbjct: 369 EGGIAVLYG 377


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 QGGFCILYG 9
+GG +LYG
Sbjct: 368 EGGIVVLYG 376


>sp|NCPP_SACS2|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus solfataricus

Query: 1 QGGFCILYG 9
+GG C +YG
Sbjct: 72 EGGVCNVYG 80


>sp|NCPP_SACI7|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 QGGFCILYG 9
+GG C +YG
Sbjct: 72 EGGVCNVYG 80


>sp|NCPP_SACI6|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 QGGFCILYG 9
+GG C +YG
Sbjct: 72 EGGVCNVYG 80


>sp|NCPP_SACI4|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 QGGFCILYG 9
+GG C +YG
Sbjct: 72 EGGVCNVYG 80


>sp|NCPP_SACI3|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 QGGFCILYG 9
+GG C +YG
Sbjct: 72 EGGVCNVYG 80


>sp|NCPP_SACI2|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 QGGFCILYG 9
+GG C +YG
Sbjct: 72 EGGVCNVYG 80


>sp|NCPP_SACI1|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus

Query: 1 QGGFCILYG 9
+GG C +YG
Sbjct: 72 EGGVCNVYG 80


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GFCILYGG 10
GFC+ GG
Sbjct: 688 GFCLYQGG 695


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 QGGFCILYG 9
+GGF ++YG
Sbjct: 316 EGGFRLVYG 324


>sp|GCH3_METST|GTP cyclohydrolase III|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GGFCILYGG 10
GG C GG
Sbjct: 175 GGMCFFIGG 183


>sp|RNZ_METVS|RIBONUCLEASE Z|Methanococcus vannielii (strain ATCC 35089

Query: 3 GFCILYGG 10
G+CI Y G
Sbjct: 208 GYCIGYSG 215


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 3 GFCILYGG 10
G C +YGG
Sbjct: 83 GTCAVYGG 90


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain

Query: 3 GFCILYGG 10
G C +YGG
Sbjct: 87 GTCAVYGG 94


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 3 GFCILYGG 10
G C +YGG
Sbjct: 87 GTCAVYGG 94


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QGGFCI 6
GGFC+
Sbjct: 291 HGGFCV 296


>sp|G6PI_NATPD|PROBABLE glucose-6-phosphate isomerase|Natronomonas pharaonis (strain ATCC

Query: 5 CILYG 9
CILYG
Sbjct: 380 CILYG 384


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GGFCILY 8
GGF I+Y
Sbjct: 1013 GGFSIIY 1019


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FCILYG 9
FCI+YG
Sbjct: 370 FCIIYG 375


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QGGFCILYG 9
GGF +YG
Sbjct: 1010 HGGFSSIYG 1018


>sp|GUAAA_SULTO|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfurisphaera

Query: 5 CILYGG 10
CI++GG
Sbjct: 44 CIIFGG 49


>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 3 GFCILYGG 10
G C +YGG
Sbjct: 85 GTCAVYGG 92


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 3 GFCILYGG 10
G C+++GG
Sbjct: 228 GACLVWGG 235


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GFCILYGG 10
G C+++GG
Sbjct: 228 GACLVWGG 235


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 GFCILYGG 10
G C+++GG
Sbjct: 228 GACLVWGG 235


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GFCILYGG 10
G C+++GG
Sbjct: 228 GACLVWGG 235


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GFCILYGG 10
G C+++GG
Sbjct: 228 GACLVWGG 235


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 3 GFCILYGG 10
G C+++GG
Sbjct: 228 GACLVWGG 235


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 QGGFCILYG 9
+GG C++ G
Sbjct: 240 RGGMCLVLG 248


>sp|SECY_METVA|PROTEIN translocase subunit SecY|Methanococcus vannielii

Query: 4 FCILYG 9
FCIL+G
Sbjct: 327 FCILFG 332


>sp|SECG_HALLT|PREPROTEIN translocase subunit SecG|Halorubrum lacusprofundi (strain ATCC

Query: 3 GFCILYG 9
FC+L+G
Sbjct: 37 AFCVLFG 43




35|Sequence|171|180|ILYGGFSRLH

>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 3 YGGFSR 8
YGGFSR
Sbjct: 324 YGGFSR 329


>sp|RS7_KORCO|SMALL ribosomal subunit protein uS7|Korarchaeum cryptofilum (strain OPF8)

Query: 1 ILYGGFSRLH 10
I+YGG S H
Sbjct: 131 IMYGGVSYFH 140


>sp|GUAAA_METAR|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocella arvoryzae

Query: 3 YGGFSRL 9
YGGF+R+
Sbjct: 97 YGGFARV 103


>sp|TCPO_METOL|PROBABLE 2' cyclic ADP-D-ribose synthase|Methanobrevibacter olleyae

Query: 1 ILYGGFSRLH 10
++Y GF RL+
Sbjct: 75 LIYKGFERLY 84


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 ILYGGFSRL 9
ILY G+SR+
Sbjct: 1071 ILYDGWSRV 1079


>sp|MTRG_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit G|Methanosarcina barkeri (strain

Query: 1 ILYGGF 6
ILYGGF
Sbjct: 50 ILYGGF 55


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILYGGFSRLH 10
ILYGG H
Sbjct: 14 ILYGGIPERH 23


>sp|Y1505_AERPE|UPF0273 protein APE_1505.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ILYGGFSR 8
ILYGG R
Sbjct: 15 ILYGGIPR 22


>sp|Y2171_ARCFU|UNCHARACTERIZED protein AF_2171|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILYGGFSRL 9
I+YGGF L
Sbjct: 26 IVYGGFGLL 34




36|Sequence|176|185|FSRLHLFASE

>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSRLHLFASE 10
RL+LFA E
Sbjct: 684 LERLYLFAKE 693


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 3 RLHLFASE 10
+LH FASE
Sbjct: 503 KLHQFASE 510




37|Sequence|181|190|LFASEQREEI

>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 LFASEQREE 9
L+A+E REE
Sbjct: 690 LYAAENREE 698


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LFASEQREEI 10
LF++E++EEI
Sbjct: 298 LFSAEEKEEI 307


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FASEQREEI 10
+ASE+RE +
Sbjct: 64 YASEERESV 72


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LFASEQREEI 10
LF++E++EE+
Sbjct: 298 LFSAEEKEEL 307


>sp|AGL9_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl9|Haloferax volcanii

Query: 1 LFASEQREEI 10
LFA EQ +EI
Sbjct: 55 LFAYEQVDEI 64


>sp|ENDA_METBF|TRNA-SPLICING endonuclease|Methanosarcina barkeri (strain Fusaro /

Query: 1 LFASEQREEI 10
LFA E+ EEI
Sbjct: 331 LFAVEKDEEI 340


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LFASEQREEI 10
+FA E+R+E+
Sbjct: 160 IFAPEKRKEL 169




38|Sequence|186|195|QREEIIKSAI

>sp|BIOB_METVS|BIOTIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 REEIIKSA 9
+EEI+KSA
Sbjct: 92 KEEILKSA 99




39|Sequence|191|200|IKSAIDHAGN

>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 1 IKSAIDHAG 9
IKSAI H G
Sbjct: 179 IKSAIKHKG 187


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 1 IKSAIDHAG 9
IKSAI H G
Sbjct: 179 IKSAIKHKG 187


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 IKSAIDHAGN 10
I+SAI + GN
Sbjct: 289 IRSAIKYIGN 298


>sp|RPO2N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 IKSAIDHAGN 10
I+SAI + GN
Sbjct: 284 IRSAIKYIGN 293


>sp|Y1253_SACS2|PUTATIVE esterase SSO1253|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SAIDHAGN 10
SA+D+AG+
Sbjct: 64 SAVDYAGS 71


>sp|HEM3_THEAC|PROBABLE porphobilinogen deaminase|Thermoplasma acidophilum (strain ATCC

Query: 1 IKSAIDHAG 9
+ SAI HAG
Sbjct: 21 VASAIRHAG 29




40|Sequence|196|205|DHAGNYIGIS

>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DHAGNYI 7
DH+G+YI
Sbjct: 147 DHSGDYI 153


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain ATCC

Query: 1 DHAGNYIGI 9
DH NY GI
Sbjct: 165 DHVLNYFGI 173


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GNYIGIS 10
GNY+G++
Sbjct: 116 GNYVGVA 122


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DHAGNYI 7
DH G+YI
Sbjct: 147 DHNGDYI 153


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 2 HAGNYIGIS 10
H G Y GIS
Sbjct: 484 HQGEYAGIS 492


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 2 HAGNYIGIS 10
H G Y GIS
Sbjct: 484 HQGEYAGIS 492


>sp|Y1511_METMJ|UPF0316 protein Memar_1511|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 GNYIGI 9
GNYIG+
Sbjct: 86 GNYIGM 91


>sp|CAS5B_SACS2|CRISPR-ASSOCIATED protein Cas5 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DHAGNYIGIS 10
DH ++ G+S
Sbjct: 103 DHVSDWFGVS 112


>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GNYIGI 9
GNY+G+
Sbjct: 178 GNYLGV 183


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HAGNYIGI 9
HA YIG+
Sbjct: 318 HASAYIGV 325




41|Sequence|201|210|YIGISLRIRK

>sp|KHSE_METKA|HOMOSERINE kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 GISLRIRK 10
G+SL IRK
Sbjct: 75 GVSLEIRK 82


>sp|Y941_METJA|TPR repeat-containing protein MJ0941|Methanocaldococcus jannaschii

Query: 1 YIGISLRIRK 10
YI I L IRK
Sbjct: 256 YINIGLEIRK 265


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 1 YIGISLRIRK 10
Y+G S+ IRK
Sbjct: 28 YVGKSISIRK 37




42|Sequence|206|215|LRIRKEPLEF

>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 LRIRKEPLEF 10
LR+R EP++F
Sbjct: 144 LRLRCEPVQF 153


>sp|NEP1_THEKO|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus kodakarensis

Query: 1 LRIRKEPLE 9
LRI K+PLE
Sbjct: 129 LRIEKKPLE 137


>sp|Y309_METM7|UPF0235 protein MmarC7_0309|Methanococcus maripaludis (strain C7 /

Query: 1 LRIRKEPLE 9
+RIR++P+E
Sbjct: 40 IRIREQPIE 48


>sp|RL10E_METS5|LARGE ribosomal subunit protein uL16|Metallosphaera sedula (strain ATCC

Query: 1 LRIRKEPLEF 10
+R++KE LEF
Sbjct: 137 IRVKKEHLEF 146


>sp|CDPAS_PYRAR|CDP-ARCHAEOL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LRIRKEP 7
LR++KEP
Sbjct: 157 LRLKKEP 163


>sp|K6PF_METJA|BIFUNCTIONAL ADP-specific glucokinase/phosphofructokinase|Methanocaldococcus

Query: 2 RIRKEPLEF 10
RI +EPL+F
Sbjct: 59 RIIEEPLDF 67


>sp|CDPAS_PYRIL|CDP-ARCHAEOL synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LRIRKEP 7
LR++KEP
Sbjct: 157 LRLKKEP 163


>sp|RS9_METMP|SMALL ribosomal subunit protein uS9|Methanococcus maripaludis (strain

Query: 1 LRIRKEPLEF 10
+RI K+PLE
Sbjct: 26 IRINKKPLEL 35


>sp|RS9_METVS|SMALL ribosomal subunit protein uS9|Methanococcus vannielii (strain

Query: 1 LRIRKEPLEF 10
+RI K+PLE
Sbjct: 26 IRINKKPLEL 35


>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RIRKEPL 8
RIRK+P+
Sbjct: 316 RIRKDPI 322


>sp|RS9_METM7|SMALL ribosomal subunit protein uS9|Methanococcus maripaludis (strain

Query: 1 LRIRKEPLEF 10
+RI K+PLE
Sbjct: 26 IRINKKPLEL 35


>sp|RL10E_SACS2|LARGE ribosomal subunit protein uL16|Saccharolobus solfataricus (strain

Query: 1 LRIRKEPLEF 10
++++KE LEF
Sbjct: 137 IKVKKEHLEF 146


>sp|RS9_METM5|SMALL ribosomal subunit protein uS9|Methanococcus maripaludis (strain

Query: 1 LRIRKEPLEF 10
+RI K+PLE
Sbjct: 26 IRINKKPLEL 35


>sp|CDPAS_PYRCJ|CDP-ARCHAEOL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LRIRKEP 7
LR++KEP
Sbjct: 158 LRLKKEP 164


>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LRIRKEPLEF 10
LR+ +E LEF
Sbjct: 34 LRLSQEDLEF 43




43|Sequence|211|220|EPLEFEQYLN

>sp|HEM3_THEVO|PROBABLE porphobilinogen deaminase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 FEQYLN 10
FEQYLN
Sbjct: 265 FEQYLN 270


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 EPLEFEQYLN 10
EP+ FE+ LN
Sbjct: 144 EPITFEEVLN 153


>sp|URED_HALMA|UREASE accessory protein UreD|Haloarcula marismortui (strain ATCC 43049

Query: 1 EPLEFEQYLN 10
E EFE+YL+
Sbjct: 174 ERFEFERYLS 183


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 EFEQYLN 10
EFE+YLN
Sbjct: 317 EFERYLN 323


>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EPLEFEQY 8
+PLE+E+Y
Sbjct: 218 DPLEYEKY 225


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 PLEFEQYLN 10
PLE E Y+N
Sbjct: 149 PLEVEYYVN 157


>sp|AROA_METVS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus vannielii (strain ATCC

Query: 2 PLEFEQYLN 10
PL+ E YLN
Sbjct: 189 PLKSEPYLN 197


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 PLEFEQYLN 10
PL+ E YLN
Sbjct: 189 PLKSEPYLN 197


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 PLEFEQYLN 10
PL+ E YLN
Sbjct: 189 PLKSEPYLN 197


>sp|AROA_METM5|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 PLEFEQYLN 10
PL+ E YLN
Sbjct: 189 PLKSEPYLN 197


>sp|Y1629_PYRAE|UPF0200 protein PAE1629|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EPLEFEQYL 9
+PL F Q+L
Sbjct: 122 DPLSFSQFL 130


>sp|ENGB_METKA|PROBABLE GTP-binding protein EngB|Methanopyrus kandleri (strain AV19 /

Query: 1 EPLEFEQYLN 10
+P+EFE++++
Sbjct: 138 KPIEFEEHMD 147


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PLEFEQYL 9
P EFEQY+
Sbjct: 77 PKEFEQYI 84


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 1 EPLEFEQYL 9
+ +EFEQ+L
Sbjct: 574 DDVEFEQFL 582


>sp|Y198_METJA|UNCHARACTERIZED protein MJ0198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPLEFEQYL 9
EP+EF+ +L
Sbjct: 219 EPVEFDGFL 227


>sp|Y778_AERPE|PUTATIVE HTH-type transcriptional regulatory protein|Aeropyrum pernix

Query: 2 PLEFEQYL 9
P EFE YL
Sbjct: 6 PGEFEDYL 13


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PLEFEQYLN 10
P +FEQY++
Sbjct: 489 PKKFEQYVS 497


>sp|DAPA_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EPLEFEQY 8
E LEF QY
Sbjct: 82 EALEFSQY 89


>sp|SYR_METHJ|ARGININE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PLEFEQYLN 10
PLE + Y+N
Sbjct: 147 PLEVQYYVN 155


>sp|DAPA_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 EPLEFEQY 8
E LEF QY
Sbjct: 82 EALEFSQY 89


>sp|DAPA_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 EPLEFEQY 8
E LEF QY
Sbjct: 82 EALEFSQY 89


>sp|DAPA_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 EPLEFEQY 8
E LEF QY
Sbjct: 82 EALEFSQY 89


>sp|DAPA_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EPLEFEQY 8
E LEF QY
Sbjct: 82 EALEFSQY 89


>sp|PELO_METKA|PROTEIN pelota homolog|Methanopyrus kandleri (strain AV19 /

Query: 1 EPLEFEQYLN 10
E +EF++Y N
Sbjct: 69 EDVEFDKYAN 78




44|Sequence|216|225|EQYLNLRFGK

>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QYLNLRFG 9
QYLN R+G
Sbjct: 83 QYLNTRYG 90


>sp|KAE1_THEPD|TRNA N6-adenosine threonylcarbamoyltransferase|Thermofilum pendens

Query: 2 QYLNLRFGK 10
+YL L+FGK
Sbjct: 100 RYLALKFGK 108


>sp|RS7_PYRNV|SMALL ribosomal subunit protein uS7|Pyrobaculum neutrophilum (strain

Query: 2 QYLNLRFGK 10
+Y N RFGK
Sbjct: 75 RYQNYRFGK 83


>sp|RS7_PYRAE|SMALL ribosomal subunit protein uS7|Pyrobaculum aerophilum (strain ATCC

Query: 2 QYLNLRFGK 10
+Y N RFGK
Sbjct: 74 RYQNTRFGK 82


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YLNLRFG 9
+LNL+FG
Sbjct: 236 FLNLKFG 242


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YLNLRFG 9
YL++RFG
Sbjct: 277 YLSVRFG 283


>sp|Y089_SULAC|MEMO1 family protein Saci_0089|Sulfolobus acidocaldarius (strain ATCC

Query: 3 YLNLRFG 9
YL++RFG
Sbjct: 277 YLSVRFG 283


>sp|RS3A_METS3|SMALL ribosomal subunit protein eS1|Methanobrevibacter smithii (strain

Query: 1 EQYLNLRF 8
+QY+ LRF
Sbjct: 62 KQYIKLRF 69


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 QYLNLRFG 9
QYL RFG
Sbjct: 555 QYLTERFG 562


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 2 QYLNLRFG 9
Q+L LRFG
Sbjct: 405 QFLLLRFG 412


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EQYLNLRFGK 10
E +LN FG+
Sbjct: 159 ESFLNAAFGR 168


>sp|COBQ_THEON|PROBABLE cobyric acid synthase|Thermococcus onnurineus (strain NA1)

Query: 2 QYLNLRFGK 10
+YL R+GK
Sbjct: 211 EYLEKRYGK 219




45|Sequence|221|230|LRFGKYSTDE

>sp|ISCS2_ARCFU|CYSTEINE desulfurase IscS 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LRFGKYSTDE 10
L G+Y+TDE
Sbjct: 348 LTLGRYNTDE 357


>sp|ISCS1_ARCFU|CYSTEINE desulfurase IscS 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LRFGKYSTDE 10
L G+Y+TDE
Sbjct: 348 LTLGRYNTDE 357


>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RFGKYS 7
RFGKYS
Sbjct: 82 RFGKYS 87


>sp|ASSY_PICTO|ARGININOSUCCINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 GKYSTDE 10
GKYS DE
Sbjct: 166 GKYSVDE 172


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GKYSTDE 10
G YSTDE
Sbjct: 254 GNYSTDE 260


>sp|AMT2_ARCFU|AMMONIUM transporter Amt2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RFGKYSTD 9
R GKY +D
Sbjct: 218 RLGKYDSD 225


>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GKYSTDE 10
GKYS DE
Sbjct: 166 GKYSVDE 172


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LRFGKYST 8
L FGK+ST
Sbjct: 339 LGFGKFST 346


>sp|RS4E_SACS2|SMALL ribosomal subunit protein eS4|Saccharolobus solfataricus (strain

Query: 1 LRFGKYSTDE 10
+RF K S DE
Sbjct: 104 MRFSKISADE 113


>sp|NADB_PYRAB|L-ASPARTATE oxidase|Pyrococcus abyssi (strain GE5 /

Query: 1 LRFGKYSTDE 10
+R GKY DE
Sbjct: 66 IRAGKYINDE 75


>sp|G3PP_PYRAB|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 2 RFGKYSTDE 10
++GKYS +E
Sbjct: 195 KYGKYSKEE 203


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 1 LRFGKYSTD 9
+R G+YST+
Sbjct: 199 VRIGEYSTE 207


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 1 LRFGKYST 8
L FG+YST
Sbjct: 453 LPFGEYST 460


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 1 LRFGKYSTDE 10
+RFG+ DE
Sbjct: 339 IRFGRIRVDE 348


>sp|APGM_THEGJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus gammatolerans (strain DSM

Query: 4 GKYSTDE 10
G+Y+TDE
Sbjct: 273 GEYNTDE 279


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LRFGKYSTDE 10
LR+G YS ++
Sbjct: 31 LRYGGYSVED 40


>sp|CSA2B_SACS2|CRISPR-ASSOCIATED aCascade subunit Cas7/Csa2 2|Saccharolobus solfataricus (strain

Query: 3 FGKYSTDE 10
F K+STDE
Sbjct: 81 FIKFSTDE 88


>sp|APGM_PYRFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GKYSTDE 10
G+Y+TDE
Sbjct: 273 GEYNTDE 279




46|Sequence|226|235|YSTDESITSL

>sp|TRPC_THEAC|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YSTDESITS 9
+STDE I+S
Sbjct: 53 FSTDEDISS 61


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YSTDESITS 9
YSTDE+ S
Sbjct: 256 YSTDEAFVS 264




47|Sequence|231|240|SITSLAEFVV

>sp|Y106_METJA|UNCHARACTERIZED protein MJ0106|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ITSLAEFVV 10
I LAEF+V
Sbjct: 92 INGLAEFIV 100


>sp|Y592_METVS|UPF0200 protein Mevan_0592|Methanococcus vannielii (strain ATCC 35089

Query: 1 SITSLAEFVV 10
S+ SLA++VV
Sbjct: 150 SVISLADYVV 159




48|Sequence|236|245|AEFVVQKISP

>sp|SPEH_PYRAR|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 EFVVQKISP 10
+F+V+K+SP
Sbjct: 102 DFIVEKLSP 110


>sp|MPTA_METST|GTP cyclohydrolase MptA|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 AEFVVQKISP 10
E+++ K+SP
Sbjct: 112 GEYIINKLSP 121


>sp|RPO3_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 1 AEFVVQKISP 10
A FVV+ I+P
Sbjct: 18 ARFVVRNITP 27


>sp|RPO3_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 1 AEFVVQKISP 10
A FVV+ I+P
Sbjct: 18 ARFVVRNITP 27


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 2 EFVVQKISP 10
+F+V++I+P
Sbjct: 25 DFIVEEITP 33


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii

Query: 2 EFVVQKISP 10
+F+V++I+P
Sbjct: 24 DFIVEEITP 32


>sp|TRUD_META3|PROBABLE tRNA pseudouridine synthase D|Methanococcus aeolicus (strain ATCC

Query: 2 EFVVQKISP 10
+F+V++I+P
Sbjct: 24 DFIVEEITP 32


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 2 EFVVQKISP 10
+F+V++I+P
Sbjct: 25 DFIVEEITP 33


>sp|RL21_SULAC|LARGE ribosomal subunit protein eL21|Sulfolobus acidocaldarius (strain

Query: 1 AEFVVQKISP 10
E+VV KI+P
Sbjct: 39 GEYVVVKINP 48




49|Sequence|241|250|QKISPRHSEP

>sp|Y441_METJA|PROBABLE membrane transporter protein MJ0441|Methanocaldococcus jannaschii

Query: 1 QKISPRH 7
QKISP+H
Sbjct: 243 QKISPKH 249


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 SPRHSEP 10
SPRH++P
Sbjct: 5 SPRHADP 11


>sp|Y551_METJA|UNCHARACTERIZED protein MJ0551|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KISPRHSE 9
KISP H E
Sbjct: 64 KISPEHLE 71


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QKISPRH 7
QKISPR
Sbjct: 74 QKISPRQ 80


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 QKISPRH 7
QK+ PRH
Sbjct: 388 QKVFPRH 394


>sp|RL22_METST|LARGE ribosomal subunit protein uL22|Methanosphaera stadtmanae (strain

Query: 2 KISPRHS 8
KISP+HS
Sbjct: 26 KISPKHS 32


>sp|RL22_METTH|LARGE ribosomal subunit protein uL22|Methanothermobacter

Query: 2 KISPRHS 8
KISP+H+
Sbjct: 25 KISPKHA 31




50|Sequence|246|255|RHSEPVKRVL

>sp|HISX_METMP|HISTIDINOL dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 HSEPVKRVL 10
HSE VKR L
Sbjct: 415 HSEAVKRRL 423


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RHSEPVKR 8
+H EP+K+
Sbjct: 253 KHEEPIKK 260


>sp|DTDA_PYRNV|D-AMINOACYL-TRNA deacylase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RHSEPVKRVL 10
+H+ PV+RV+
Sbjct: 214 KHTTPVRRVV 223


>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila (strain

Query: 1 RHSEPVK 7
RH+EP+K
Sbjct: 151 RHAEPMK 157


>sp|RIFK_HALWD|RIBOFLAVIN kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HSEPVK 7
HSEP+K
Sbjct: 25 HSEPIK 30


>sp|IF2G_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 RHSEPVKR 8
RHSE +KR
Sbjct: 52 RHSEELKR 59


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 2 HSEPVKR 8
HSE VKR
Sbjct: 68 HSEEVKR 74


>sp|Y3506_METJA|UNCHARACTERIZED protein MJECL06|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HSEPVKRVL 10
HSE K+VL
Sbjct: 17 HSEEFKKVL 25


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 2 HSEPVKR 8
HSE VKR
Sbjct: 56 HSEEVKR 62




51|Sequence|251|260|VKRVLALTET

>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii

Query: 2 KRVLALTET 10
KRVL LTET
Sbjct: 63 KRVLILTET 71


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 VKRVLALTE 9
V+R+ ALTE
Sbjct: 61 VRRIAALTE 69


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 1 VKRVLALTE 9
VKR+LAL +
Sbjct: 4 VKRILALVD 12




52|Sequence|256|265|ALTETCLVER

>sp|GUAAB_METMJ|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoculleus

Query: 1 ALTETCLVE 9
A+ E CLVE
Sbjct: 213 AIVEECLVE 221


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 4 ETCLVE 9
ETCLVE
Sbjct: 77 ETCLVE 82




53|Sequence|261|270|CLVERDPATY

>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LVERDPATY 10
LVERDPATY
Sbjct: 370 LVERDPATY 378


>sp|MTD_ARCFU|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Archaeoglobus

Query: 1 CLVERDPATY 10
C +E+DP Y
Sbjct: 211 CFIEKDPEKY 220


>sp|TRPC_SACS2|INDOLE-3-GLYCEROL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VERDPATY 10
VERDP Y
Sbjct: 62 VERDPIEY 69


>sp|MTRA_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 3 VERDPATY 10
VE+DP Y
Sbjct: 157 VEKDPGAY 164


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 CLVERDPA 8
C+VE DP+
Sbjct: 79 CMVEIDPS 86


>sp|COFH_HALMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Haloarcula marismortui (strain ATCC

Query: 4 ERDPATY 10
E DPATY
Sbjct: 182 ETDPATY 188


>sp|PGP_PYRAE|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CLVERDPATY 10
CLV D TY
Sbjct: 70 CLVHLDGVTY 79


>sp|PGP_PYRIL|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 CLVERDPATY 10
CL+ D TY
Sbjct: 70 CLIHLDGVTY 79


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis

Query: 3 VERDPAT 9
+ERDP T
Sbjct: 91 IERDPET 97




54|Sequence|266|275|DPATYNIATL

>sp|DTDA_METTP|D-AMINOACYL-TRNA deacylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DPATYNIAT 9
DPA+ NIA+
Sbjct: 12 DPASSNIAS 20


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 DPATYNIAT 9
DP +NIAT
Sbjct: 45 DPGYHNIAT 53


>sp|DPS_SACS2|DNA protection during starvation protein|Saccharolobus solfataricus

Query: 1 DPATYNIA 8
DP TY++A
Sbjct: 142 DPRTYDLA 149


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 DPATYNIA 8
DPA+ NIA
Sbjct: 12 DPASKNIA 19


>sp|DPS_PYRFU|DNA protection during starvation protein|Pyrococcus furiosus (strain

Query: 1 DPATYNIA 8
DP TY++A
Sbjct: 134 DPRTYDLA 141


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 2 PATYNIATL 10
P T+NI T+
Sbjct: 350 PTTWNIPTM 358


>sp|PSB_METKA|PROTEASOME subunit beta|Methanopyrus kandleri (strain AV19 /

Query: 1 DPATYNI 7
DPA YN+
Sbjct: 120 DPALYNL 126


>sp|G1PDH_STAMF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Staphylothermus marinus (strain ATCC

Query: 2 PATYNIA 8
P TYN+A
Sbjct: 46 PTTYNVA 52




55|Sequence|271|280|NIATLKPLGE

>sp|COBS_PYRFU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IATLKPLGE 10
+AT KPLGE
Sbjct: 136 LATKKPLGE 144


>sp|COBS_PYRAB|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 IATLKPLGE 10
+AT KPLG+
Sbjct: 136 LATKKPLGQ 144


>sp|COBS_THEGJ|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 IATLKPLGE 10
+AT KPLG+
Sbjct: 136 LATRKPLGQ 144


>sp|COBS_THEON|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus onnurineus (strain NA1)

Query: 2 IATLKPLGE 10
+AT KPLG+
Sbjct: 136 LATRKPLGQ 144


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 2 IATLKPLGE 10
+ TL P+GE
Sbjct: 675 VHTLSPIGE 683


>sp|TKTC_METJA|PUTATIVE transketolase C-terminal section|Methanocaldococcus jannaschii

Query: 2 IATLKPLGE 10
+AT+KP+ E
Sbjct: 229 MATIKPIDE 237




56|Sequence|276|285|KPLGEVFALV

>sp|RIBA_ARCFU|GTP cyclohydrolase-2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PLGEVFALV 10
PLGE+ ALV
Sbjct: 209 PLGEIVALV 217


>sp|NTPTH_THEKO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KPLGEVFAL 9
+PLGEV L
Sbjct: 147 RPLGEVHTL 155


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM

Query: 1 KPLGEVFA 8
K LGEVF+
Sbjct: 2 KALGEVFS 9


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KPLGEV 6
KPLGE+
Sbjct: 600 KPLGEI 605


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 1 KPLGEV 6
KPLGEV
Sbjct: 138 KPLGEV 143


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain ATCC

Query: 1 KPLGEVF 7
KPLGEV
Sbjct: 138 KPLGEVI 144


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KPLGEVFAL 9
KP+G++ AL
Sbjct: 638 KPVGDISAL 646


>sp|CPGS_METTH|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermobacter

Query: 1 KPLGEV 6
KPLGE+
Sbjct: 340 KPLGEI 345




57|Sequence|281|290|VFALVCDSEN

>sp|Y3532_METJA|UNCHARACTERIZED protein MJECL32|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LVCDSEN 10
L+CD+EN
Sbjct: 226 LICDAEN 232


>sp|PGP_ARCFU|PHOSPHOGLYCOLATE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FALVCDSEN 10
FA++ DSEN
Sbjct: 167 FAVIGDSEN 175


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FALVCDSE 9
+ VCDSE
Sbjct: 193 YVCVCDSE 200


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 VFALVCDSEN 10
V L CD EN
Sbjct: 140 VIHLPCDEEN 149




58|Sequence|286|295|CDSENPQLFT

>sp|RL18_SULTO|LARGE ribosomal subunit protein uL18|Sulfurisphaera tokodaii (strain DSM

Query: 2 DSENPQLF 9
++ENP+LF
Sbjct: 156 EAENPELF 163


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 2 DSENPQL 8
DSENP++
Sbjct: 527 DSENPEI 533


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 1 CDSENPQLF 9
CD NP +F
Sbjct: 493 CDKINPDIF 501


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CDSENPQLF 9
CD NP +F
Sbjct: 493 CDKINPDIF 501


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 1 CDSENPQLF 9
CD NP +F
Sbjct: 493 CDKINPDVF 501


>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 1 CDSENPQL 8
CD E P++
Sbjct: 61 CDDETPEI 68


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 1 CDSENPQLF 9
CD NP +F
Sbjct: 493 CDKINPDVF 501


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 4 ENPQLF 9
ENP+LF
Sbjct: 390 ENPELF 395


>sp|PSB1_THEPD|PROTEASOME subunit beta 1|Thermofilum pendens (strain DSM 2475

Query: 2 DSENPQLFT 10
DS+ P LF+
Sbjct: 116 DSDGPSLFS 124


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DSENPQLFT 10
D+E PQL T
Sbjct: 519 DTEGPQLGT 527


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DSENPQL 8
D ENP+L
Sbjct: 48 DEENPEL 54




59|Sequence|291|300|PQLFTIEFIK

>sp|CSM4_METJA|CRISPR system Cms protein Csm4|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QLFTIEFIK 10
QL+ IEFIK
Sbjct: 189 QLYNIEFIK 197


>sp|NPD_SULTO|NAD-DEPENDENT protein deacetylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PQLFTIEFIK 10
P+L TIE+ K
Sbjct: 45 PELATIEYFK 54


>sp|Y1893_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 1 PQLFTIEFIK 10
PQ F + FIK
Sbjct: 366 PQFFDVMFIK 375


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 1 PQLFTIEFIK 10
PQ F + FIK
Sbjct: 366 PQFFDVMFIK 375


>sp|FLAH_METJA|ARCHAEAL flagellar ATP-binding protein FlaH|Methanocaldococcus jannaschii

Query: 2 QLFTIEFIK 10
QL T+EFIK
Sbjct: 64 QLTTLEFIK 72


>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PQLFTIEFI 9
PQ+ IEF+
Sbjct: 210 PQIVKIEFV 218


>sp|TRM56_SULTO|TRNA (cytidine(56)-2'-O)-methyltransferase|Sulfurisphaera tokodaii

Query: 2 QLFTIEFIK 10
+ F+IEF+K
Sbjct: 50 KYFSIEFVK 58


>sp|SPEE_PYRAR|POLYAMINE aminopropyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 QLFTIEFI 9
QL+T EFI
Sbjct: 176 QLYTAEFI 183


>sp|Y670_METJA|UNCHARACTERIZED protein MJ0670|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PQLFTIEFIK 10
P L+T +F+K
Sbjct: 194 PTLYTYDFLK 203




60|Sequence|296|305|IEFIKGQVRK

>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IEFIKGQVR 9
IEFI+GQ R
Sbjct: 185 IEFIRGQFR 193


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IEFIKGQVRK 10
IEFI G++R+
Sbjct: 212 IEFINGEIRE 221


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 EFIKGQV 8
EF++GQV
Sbjct: 597 EFVRGQV 603


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 EFIKGQV 8
EF++GQV
Sbjct: 600 EFVRGQV 606


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EFIKGQV 8
EF++GQ+
Sbjct: 605 EFVRGQI 611


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 EFIKGQV 8
EF++GQ+
Sbjct: 601 EFVRGQI 607


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 EFIKGQV 8
EF++GQ+
Sbjct: 601 EFVRGQI 607


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EFIKGQVRK 10
EFI G +RK
Sbjct: 529 EFITGTIRK 537


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IEFIKGQVRK 10
+EF+ G VR+
Sbjct: 476 MEFLPGHVRR 485


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IEFIKGQVR 9
IEF KG +R
Sbjct: 371 IEFHKGSIR 379


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IEFIKGQVRK 10
IE++KG+ ++
Sbjct: 236 IEYVKGRAKR 245


>sp|PYRB_PYRIL|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum islandicum

Query: 1 IEFIKGQV 8
+EF+KG++
Sbjct: 36 VEFLKGKI 43




61|Sequence|301|310|GQVRKYSSTE

>sp|TRM1_HALSA|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 3 VRKYSST 9
VRKYS+T
Sbjct: 164 VRKYSAT 170


>sp|TRM1_HALS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 3 VRKYSST 9
VRKYS+T
Sbjct: 164 VRKYSAT 170


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 2 QVRKYSSTE 10
QVR Y +TE
Sbjct: 92 QVRAYDNTE 100


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GQVRKYSS 8
G+VR+Y S
Sbjct: 731 GEVRRYKS 738


>sp|TRPD_METLZ|ANTHRANILATE phosphoribosyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 GQVRKYS 7
GQVR YS
Sbjct: 241 GQVRSYS 247


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GQVRKYSS 8
G+VR+Y S
Sbjct: 731 GEVRRYKS 738


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GQVRKYSS 8
G+VR+Y S
Sbjct: 731 GEVRRYKS 738




62|Sequence|306|315|YSSTERDSLL

>sp|HIS4_THEKO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Thermococcus kodakarensis (strain

Query: 1 YSSTERDSLL 10
Y+S ERD L
Sbjct: 160 YTSIERDGTL 169


>sp|PSB_HALMD|PROTEASOME subunit beta|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 YSSTERDS 8
Y++TERD+
Sbjct: 202 YAATERDT 209


>sp|F16PA_HALSA|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 YSSTERDSLL 10
Y+S ERD+++
Sbjct: 64 YASEERDAVV 73


>sp|F16PA_HALS3|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 YSSTERDSLL 10
Y+S ERD+++
Sbjct: 64 YASEERDAVV 73


>sp|HIS4_THEON|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Thermococcus onnurineus (strain

Query: 1 YSSTERDSLL 10
Y+S ERD L
Sbjct: 160 YTSIERDGTL 169


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YSSTERDSLL 10
Y+S ER+S++
Sbjct: 64 YASEERESVI 73




63|Sequence|311|320|RDSLLASLLD

>sp|SYFB_SACI7|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RDSLLASLLD 10
RDSL+ LLD
Sbjct: 407 RDSLIPGLLD 416


>sp|SYFB_SACI1|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RDSLLASLLD 10
RDSL+ LLD
Sbjct: 407 RDSLIPGLLD 416


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 1 RDSLLASLLD 10
RD LLA L+D
Sbjct: 183 RDQLLAKLVD 192




64|Sequence|316|325|ASLLDGVRAS

>sp|NADK_METPE|NAD kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 LLDGVRAS 10
L+DGVRA
Sbjct: 149 LVDGVRAE 156




65|Sequence|321|330|GVRASGNRDV

>sp|PSB1_PYRFU|PROTEASOME subunit beta 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVRASGNRDV 10
VRA+G RDV
Sbjct: 164 AVRAAGRRDV 173


>sp|PSB1_PYRHO|PROTEASOME subunit beta 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GVRASGNRDV 10
++A+G+RDV
Sbjct: 164 AIKAAGSRDV 173


>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 2 VRASGNRDV 10
+ A+GNRDV
Sbjct: 272 ITATGNRDV 280


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GVRASGNRD 9
GVR + N+D
Sbjct: 807 GVRGTSNKD 815


>sp|SIHH_METMA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VRASGNRDV 10
V A+GNRD+
Sbjct: 263 VTATGNRDI 271


>sp|CG121_METJA|REGULATORY protein Cgi121|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VRASGNRDV 10
VRASG R +
Sbjct: 59 VRASGQRQI 67


>sp|PSB1_PYRAB|PROTEASOME subunit beta 1|Pyrococcus abyssi (strain GE5 /

Query: 1 GVRASGNRDV 10
V+A+G RDV
Sbjct: 164 AVKAAGARDV 173


>sp|SAHH_ARCFU|ADENOSYLHOMOCYSTEINASE fulgidus (strain ATCC 49558

Query: 2 VRASGNRDV 10
+ A+GNRD+
Sbjct: 255 ITATGNRDI 263


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 2 VRASGNRDV 10
V +GNRDV
Sbjct: 279 VTTTGNRDV 287


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 2 VRASGNRDV 10
V +GNRDV
Sbjct: 279 VTTTGNRDV 287


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VRASGNRDV 10
V ASGN D+
Sbjct: 326 VNASGNSDL 334


>sp|SECD_METTH|PROTEIN-EXPORT membrane protein SecD|Methanothermobacter thermautotrophicus

Query: 2 VRASGNRDV 10
VRASG+++V
Sbjct: 79 VRASGDQNV 87




66|Sequence|326|335|GNRDVCVKMT

>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 1 GNRDVCVK 8
G RD+C+K
Sbjct: 213 GERDLCIK 220


>sp|PUR5_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C7 /

Query: 2 NRDVCVKM 9
N+DVC K+
Sbjct: 252 NKDVCYKI 259


>sp|PUR5_METM6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C6 /

Query: 2 NRDVCVKM 9
N+DVC K+
Sbjct: 252 NKDVCYKI 259


>sp|RL5_PYRAE|LARGE ribosomal subunit protein uL5|Pyrobaculum aerophilum (strain ATCC

Query: 4 DVCVKM 9
DVCVK+
Sbjct: 133 DVCVKL 138


>sp|PORD_PYRFU|PYRUVATE synthase subunit PorD|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NRDVCVK 8
NRD CV+
Sbjct: 49 NRDKCVR 55




67|Sequence|331|340|CVKMTPTHKG

>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 VKMTPTHK 9
+K+TP HK
Sbjct: 483 IKITPDHK 490


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VKMTPTHK 9
+K+TP HK
Sbjct: 323 IKVTPIHK 330


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 2 VKMTPTHK 9
+K+TP HK
Sbjct: 323 IKVTPIHK 330


>sp|CMR4_PYRFU|CRISPR system Cmr endoribonuclease Cmr4|Pyrococcus furiosus (strain ATCC

Query: 4 MTPTHKG 10
+TPTH G
Sbjct: 11 LTPTHPG 17


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VKMTPTHK 9
V++TP HK
Sbjct: 319 VRVTPVHK 326


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VKMTPTHK 9
+K+TP H+
Sbjct: 323 IKVTPIHR 330


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KMTPTHKG 10
K+ PT KG
Sbjct: 1564 KLVPTEKG 1571


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KMTPTHKG 10
K+ PT KG
Sbjct: 1153 KLVPTEKG 1160


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 3 KMTPTHKG 10
K+ PT KG
Sbjct: 1153 KLVPTEKG 1160


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VKMTPTHK 9
V +TP HK
Sbjct: 320 VSVTPVHK 327


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VKMTPTHK 9
+K TP HK
Sbjct: 460 LKCTPNHK 467


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 2 VKMTPTHK 9
+K TP HK
Sbjct: 460 LKCTPNHK 467


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 VKMTPTHK 9
+K TP HK
Sbjct: 463 LKCTPNHK 470


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VKMTPTHK 9
+K TP HK
Sbjct: 479 LKCTPNHK 486




68|Sequence|336|345|PTHKGQRWGL

>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 1 PTHKGQRW 8
PT+KGQR+
Sbjct: 360 PTNKGQRY 367


>sp|Y951_METJA|UNCHARACTERIZED protein MJ0951|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTHKGQRWGL 10
P HKG ++ L
Sbjct: 61 PLHKGHKYAL 70


>sp|RS2_META3|SMALL ribosomal subunit protein uS2|Methanococcus aeolicus (strain ATCC

Query: 3 HKGQRWG 9
+G+RWG
Sbjct: 211 QRGRRWG 217


>sp|AMPK_PYRFU|LYSYL aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 THKGQRWGL 10
T KG+R+G+
Sbjct: 102 TEKGERYGV 110


>sp|PURO_METKA|IMP cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 3 HKGQRWGL 10
H G RW L
Sbjct: 188 HDGGRWSL 195


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 PTHKGQ 6
P HKGQ
Sbjct: 217 PEHKGQ 222


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 3 HKGQRW 8
HKG W
Sbjct: 82 HKGSEW 87




69|Sequence|341|350|QRWGLLSMPV

>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 2 RWGLLS 7
RWGL+S
Sbjct: 513 RWGLIS 518


>sp|Y2166_ARCFU|UNCHARACTERIZED protein AF_2166|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WGLLSMP 9
WG++SMP
Sbjct: 69 WGIVSMP 75


>sp|Y1245_METJA|UNCHARACTERIZED protein MJ1245|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QRWGLLSMPV 10
+RW ++ +P+
Sbjct: 95 ERWTVMKIPI 104


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 3 WGLLSMPV 10
WG+ S P+
Sbjct: 34 WGVSSFPI 41


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WGLLSMPV 10
WG+ S P+
Sbjct: 34 WGVSSFPI 41


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 WGLLSMPV 10
WG+ S P+
Sbjct: 34 WGVSSFPI 41


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WGLLSMPV 10
WG+ S P+
Sbjct: 34 WGVSSFPI 41


>sp|CBIM1_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain

Query: 1 QRWGLLSMPV 10
Q W +LS+PV
Sbjct: 14 QIWWILSIPV 23




70|Sequence|346|355|LSMPVDEEVE

>sp|IF5A_PYRAE|TRANSLATION initiation factor 5A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LSMPVDEEVE 10
LS+PVD +VE
Sbjct: 63 LSLPVDAQVE 72


>sp|IF5A_PYRNV|TRANSLATION initiation factor 5A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LSMPVDEEVE 10
LS+PVD +VE
Sbjct: 57 LSLPVDAQVE 66


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSMPVDEE 8
+SMP DEE
Sbjct: 145 VSMPYDEE 152


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LSMPVDEEVE 10
+ MP+D+EV+
Sbjct: 272 IRMPLDDEVK 281


>sp|IF5A_SULAC|TRANSLATION initiation factor 5A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LSMPVDEEVE 10
L PVD++VE
Sbjct: 57 LMAPVDQQVE 66


>sp|IF5A_SACS2|TRANSLATION initiation factor 5A|Saccharolobus solfataricus (strain ATCC

Query: 1 LSMPVDEEVE 10
L PVD++VE
Sbjct: 57 LMAPVDQQVE 66


>sp|IF5A_SACI7|TRANSLATION initiation factor 5A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LSMPVDEEVE 10
L PVD++VE
Sbjct: 57 LMAPVDQQVE 66


>sp|IF5A_SACI6|TRANSLATION initiation factor 5A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LSMPVDEEVE 10
L PVD++VE
Sbjct: 57 LMAPVDQQVE 66


>sp|IF5A_SACI4|TRANSLATION initiation factor 5A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LSMPVDEEVE 10
L PVD++VE
Sbjct: 57 LMAPVDQQVE 66


>sp|IF5A_SACI3|TRANSLATION initiation factor 5A|Saccharolobus islandicus (strain M.16.27)

Query: 1 LSMPVDEEVE 10
L PVD++VE
Sbjct: 57 LMAPVDQQVE 66


>sp|IF5A_SACI1|TRANSLATION initiation factor 5A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LSMPVDEEVE 10
L PVD++VE
Sbjct: 57 LMAPVDQQVE 66


>sp|IF5A_SACI2|TRANSLATION initiation factor 5A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LSMPVDEEVE 10
L PVD++VE
Sbjct: 57 LMAPVDQQVE 66


>sp|RS19_PYRCJ|SMALL ribosomal subunit protein uS19|Pyrobaculum calidifontis (strain

Query: 1 LSMPVDEEVE 10
L+MP+DE ++
Sbjct: 40 LNMPMDEFIK 49


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LSMPVDEEV 9
L MPV EE+
Sbjct: 80 LKMPVSEEL 88


>sp|RS19_PYRAR|SMALL ribosomal subunit protein uS19|Pyrobaculum arsenaticum (strain

Query: 1 LSMPVDEEVE 10
L+MP+DE ++
Sbjct: 41 LNMPMDEFIK 50


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LSMPVDEEVE 10
LS+P E+VE
Sbjct: 335 LSLPTVEQVE 344


>sp|RS19_SULAC|SMALL ribosomal subunit protein uS19|Sulfolobus acidocaldarius (strain

Query: 1 LSMPVDEEVE 10
L+MP+DE ++
Sbjct: 23 LNMPMDEFIK 32


>sp|MOAA_META3|PROBABLE GTP 3',8-cyclase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 MPVDEEVE 10
MPVDE+++
Sbjct: 187 MPVDEKLK 194




71|Sequence|351|360|DEEVESLHLR

>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DEEVESLHLR 10
DEE+E LH R
Sbjct: 471 DEELERLHER 480


>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 1 DEEVESLHL 9
DEE S+HL
Sbjct: 552 DEEYRSMHL 560


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 DEEVESLHLR 10
D E+E LH R
Sbjct: 665 DHELEDLHFR 674


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 1 DEEVESLHLR 10
D EVE HL+
Sbjct: 385 DREVEWYHLK 394


>sp|GFPS_NATPD|GERANYLFARNESYL diphosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DEEVESLH 8
DE VE+LH
Sbjct: 213 DETVEALH 220


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 1 DEEVESLHLR 10
D+E+E HL+
Sbjct: 384 DKEIEWYHLK 393


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 1 DEEVESLH 8
+EE+E+LH
Sbjct: 498 NEEIENLH 505




72|Sequence|356|365|SLHLRFLATP

>sp|VHUA_METJA|F420-NON-REDUCING hydrogenase vhu subunit A|Methanocaldococcus jannaschii (strain

Query: 1 SLHLRFLATP 10
+LH FLA P
Sbjct: 105 ALHFYFLAAP 114


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 2 LHLRFLATP 10
LH FLA P
Sbjct: 109 LHFYFLAAP 117


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 2 LHLRFLATP 10
LH FLA P
Sbjct: 109 LHFYFLAAP 117


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 2 LHLRFLATP 10
LH FLA P
Sbjct: 109 LHFYFLAAP 117


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 3 HLRFLATP 10
HL++L TP
Sbjct: 199 HLQYLPTP 206


>sp|RS4E_NANEQ|SMALL ribosomal subunit protein eS4|Nanoarchaeum equitans (strain

Query: 3 HLRFLATP 10
HLR LA P
Sbjct: 8 HLRSLAVP 15


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 1 SLHLRFLATP 10
+L +RF+ TP
Sbjct: 14 TLFIRFILTP 23




73|Sequence|361|370|FLATPPNGNF

>sp|DNAG_NATPD|DNA primase DnaG|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FLATPPNG 8
++ATPP+G
Sbjct: 235 YVATPPDG 242


>sp|HISX_SULAC|HISTIDINOL dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FLATPPN 7
++ATPPN
Sbjct: 140 YVATPPN 146


>sp|TLDD_SACS2|ZINC metalloprotease TldD homolog|Saccharolobus solfataricus (strain

Query: 1 FLATPPNGN 9
+L PP GN
Sbjct: 306 YLGQPPTGN 314


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 2 LATPPNGN 9
+ TPPNG+
Sbjct: 671 IPTPPNGS 678


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 ATPPNG 8
+TPPNG
Sbjct: 87 STPPNG 92


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 LATPPNGNF 10
LA PNG+F
Sbjct: 123 LAKSPNGSF 131


>sp|T1MH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 5 PPNGN 9
PPNGN
Sbjct: 357 PPNGN 361


>sp|SEPS_METKA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 ATPPNGNF 10
A PP G+F
Sbjct: 452 AVPPEGDF 459


>sp|Y1811_METBU|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcoides

Query: 2 LATPPNGN 9
+ TPPN N
Sbjct: 209 MKTPPNDN 216


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 FLATPP 6
FL+TPP
Sbjct: 30 FLSTPP 35


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 1 FLATPPN 7
FLATP N
Sbjct: 17 FLATPEN 23


>sp|T2M6_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 FLATPPNGN 9
FLATP N
Sbjct: 163 FLATPDKDN 171




74|Sequence|366|375|PNGNFADAVF

>sp|RLME_METMA|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina mazei (strain

Query: 1 PNGNFADAVF 10
P GNFA VF
Sbjct: 142 PKGNFAVKVF 151


>sp|RIFK_METST|RIBOFLAVIN kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NGNFADAVF 10
NG+F D +F
Sbjct: 66 NGSFGDVLF 74


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 3 GNFADAVF 10
G F DAVF
Sbjct: 87 GQFPDAVF 94


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PNGNFADAV 9
P G+F+DA+
Sbjct: 976 PVGDFSDAI 984


>sp|NEP1_SACS2|RIBOSOMAL RNA small subunit methyltransferase|Saccharolobus solfataricus

Query: 1 PNGNFADAVF 10
P+G+F+D +
Sbjct: 175 PHGDFSDKIL 184


>sp|RLME_METBF|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina barkeri (strain

Query: 1 PNGNFADAVF 10
P GNF VF
Sbjct: 142 PKGNFVVKVF 151


>sp|RLME_ARCFU|RIBOSOMAL RNA large subunit methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 PNGNFADAVF 10
P GNF VF
Sbjct: 138 PGGNFVVKVF 147


>sp|RLME_METAC|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina acetivorans

Query: 1 PNGNFADAVF 10
P GNF VF
Sbjct: 142 PKGNFVVKVF 151


>sp|DTDA_CENSY|D-AMINOACYL-TRNA deacylase|Cenarchaeum symbiosum (strain A)

Query: 3 GNFADAVF 10
GNFA+A F
Sbjct: 81 GNFAEAQF 88


>sp|RS5_METS3|SMALL ribosomal subunit protein uS5|Methanobrevibacter smithii (strain

Query: 4 NFADAVF 10
NFA+A+F
Sbjct: 184 NFANAIF 190


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 NGNFAD 7
NGNF D
Sbjct: 350 NGNFTD 355


>sp|RLME_META3|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus aeolicus (strain

Query: 2 NGNFADAVF 10
NGNF VF
Sbjct: 154 NGNFVVKVF 162


>sp|GCH3_HALLT|GTP cyclohydrolase III|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PNGNFADAV 9
P G FAD V
Sbjct: 197 PEGAFADTV 205




75|Sequence|371|380|ADAVFRFNAN

>sp|Y1638_METJA|UNCHARACTERIZED protein MJ1638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DAVFRFN 8
D +FRFN
Sbjct: 180 DEIFRFN 186


>sp|FAEHP_METTP|BIFUNCTIONAL enzyme Fae/Hps|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DAVFRFN 8
DA++R+N
Sbjct: 123 DAIYRYN 129




76|Sequence|376|385|RFNANISYSG

>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RFNANISYSG 10
RF+ N+S++G
Sbjct: 392 RFHNNLSFTG 401


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii

Query: 2 FNANISYSG 10
FNAN+S G
Sbjct: 63 FNANLSIPG 71


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 FNANISYSG 10
FN NI++ G
Sbjct: 542 FNVNITWDG 550


>sp|UPPP_METTP|UNDECAPRENYL-DIPHOSPHATASE thermoacetophila (strain DSM 6194

Query: 1 RFNANISYS 9
RF+ N+S+S
Sbjct: 228 RFSRNVSFS 236


>sp|Y328_METJA|UNCHARACTERIZED protein MJ0328|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RFNANISYSG 10
++N +ISYS
Sbjct: 41 KYNEDISYSA 50


>sp|CAS1C_METRM|CRISPR-ASSOCIATED protein Cas1 3|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 RFNANISYSG 10
+ N+NI+Y G
Sbjct: 292 KVNSNINYEG 301


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FNANISY 8
FNAN+SY
Sbjct: 910 FNANLSY 916


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FNANISYS 9
FN N++YS
Sbjct: 308 FNENVNYS 315


>sp|RL22_METLZ|LARGE ribosomal subunit protein uL22|Methanocorpusculum labreanum

Query: 1 RFNANISY 8
RFN N+S+
Sbjct: 63 RFNRNVSH 70




77|Sequence|381|390|ISYSGVLHAV

>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 1 ISYSGVLHA 9
I+++G+LHA
Sbjct: 305 ITFAGILHA 313


>sp|EF1A_PYRWO|ELONGATION factor 1-alpha|Pyrococcus woesei

Query: 1 ISYSGVLHA 9
+ YS VLHA
Sbjct: 340 VGYSPVLHA 348


>sp|EF1A_PYRHO|ELONGATION factor 1-alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ISYSGVLHA 9
+ YS VLHA
Sbjct: 338 VGYSPVLHA 346


>sp|EF1A_PYRFU|ELONGATION factor 1-alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ISYSGVLHA 9
+ YS VLHA
Sbjct: 338 VGYSPVLHA 346


>sp|EF1A_PYRAB|ELONGATION factor 1-alpha|Pyrococcus abyssi (strain GE5 /

Query: 1 ISYSGVLHA 9
+ YS VLHA
Sbjct: 338 VGYSPVLHA 346


>sp|EF1A_THESM|ELONGATION factor 1-alpha|Thermococcus sibiricus (strain DSM 12597

Query: 1 ISYSGVLHA 9
I Y+ VLHA
Sbjct: 338 IGYTPVLHA 346


>sp|EF1A_THEON|ELONGATION factor 1-alpha|Thermococcus onnurineus (strain NA1)

Query: 1 ISYSGVLHA 9
I Y+ VLHA
Sbjct: 338 IGYTPVLHA 346


>sp|LYSK_SULTO|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ISYSGVLH 8
+ Y GVLH
Sbjct: 154 VEYRGVLH 161


>sp|PYLS_METBU|PYRROLYSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ISYSGVLHAV 10
+S SG+LH +
Sbjct: 17 LSRSGLLHGI 26


>sp|RL30_KORCO|LARGE ribosomal subunit protein uL30|Korarchaeum cryptofilum (strain

Query: 2 SYSGVLHAV 10
SY G++H V
Sbjct: 48 SYKGMIHRV 56


>sp|Y1268_ARCFU|UNCHARACTERIZED protein AF_1268|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ISYSGVLHA 9
+++SG+LH
Sbjct: 143 LNFSGILHV 151




78|Sequence|386|395|VLHAVTQDGL

>sp|TRUA_HALSA|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 1 VLHAVTQDGL 10
VLHAV DGL
Sbjct: 221 VLHAVAYDGL 230


>sp|TRUA_HALS3|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC 29341

Query: 1 VLHAVTQDGL 10
VLHAV DGL
Sbjct: 221 VLHAVAYDGL 230


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VLHAVTQDGL 10
VLHA+T+D L
Sbjct: 192 VLHALTRDKL 201


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VLHAVTQDGL 10
VLH V Q+GL
Sbjct: 569 VLHRVEQEGL 578


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 VLHAVTQDG 9
V+HA+ Q+G
Sbjct: 96 VMHAIAQEG 104


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LHAVTQDG 9
LH VT DG
Sbjct: 362 LHPVTSDG 369


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 VLHAVTQDGL 10
+LHA T D L
Sbjct: 680 ILHAATSDSL 689


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 VLHAVTQDGL 10
+LHA T D L
Sbjct: 680 ILHAATSDSL 689


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 5 VTQDGL 10
VTQDGL
Sbjct: 298 VTQDGL 303


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 5 VTQDGL 10
VTQDGL
Sbjct: 15 VTQDGL 20


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 1 VLHAVTQDG 9
VLH + +DG
Sbjct: 104 VLHVLPEDG 112


>sp|PYRB_METLZ|ASPARTATE carbamoyltransferase catalytic subunit|Methanocorpusculum labreanum

Query: 2 LHAVTQDGL 10
LH + DGL
Sbjct: 181 LHTIAPDGL 189




79|Sequence|391|400|TQDGLFSENK

>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 3 DGLFSENK 10
DG + ENK
Sbjct: 497 DGYYDENK 504


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 TQDGLFSE 8
T DGLF E
Sbjct: 616 TSDGLFFE 623


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 5 LFSENK 10
LFSENK
Sbjct: 533 LFSENK 538


>sp|PCNA1_SACS2|DNA polymerase sliding clamp 1|Saccharolobus solfataricus (strain

Query: 1 TQDGLFSEN 9
T+DG+FS +
Sbjct: 31 TEDGIFSRH 39


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 1 TQDGLFSENK 10
T DG+F +NK
Sbjct: 392 TVDGVFLKNK 401




80|Sequence|396|405|FSENKEKLIN

>sp|HCGF_METTH|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanothermobacter

Query: 2 SENKEKLIN 10
SEN+E++IN
Sbjct: 114 SENREEVIN 122


>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 1 FSENKEKLIN 10
+ EN+EKL N
Sbjct: 106 YKENREKLTN 115


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 4 NKEKLIN 10
NKE+LIN
Sbjct: 711 NKEELIN 717


>sp|Y1285_SULAC|UPF0201 protein Saci_1285|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SENKEKLIN 10
SE+K+K+IN
Sbjct: 13 SEDKDKVIN 21


>sp|Y1560_METJA|UNCHARACTERIZED MFS-type transporter MJ1560|Methanocaldococcus jannaschii (strain

Query: 1 FSENKEKL 8
F++NKEK+
Sbjct: 186 FNKNKEKI 193


>sp|AROD_SULAC|3-DEHYDROQUINATE dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FSENKEKLI 9
FS+ KEKLI
Sbjct: 51 FSKYKEKLI 59


>sp|Y649_ARCFU|UPF0280 protein AF_0649|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSENKEKLI 9
F+E+KE LI
Sbjct: 222 FAESKEDLI 230


>sp|ADEC_ARCFU|ADENINE deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSENKEKL 8
F E KEKL
Sbjct: 227 FEEGKEKL 234


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FSENKEKLI 9
F ++KEKLI
Sbjct: 216 FCKDKEKLI 224


>sp|Y1985_PYRAR|UPF0201 protein Pars_1985|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SENKEKLIN 10
+ENK+K+I+
Sbjct: 12 TENKQKVIH 20


>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 ENKEKLIN 10
EN EK+IN
Sbjct: 172 ENNEKMIN 179


>sp|GUAAA_THEVO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermoplasma volcanium

Query: 2 SENKEKLIN 10
++KEKLIN
Sbjct: 189 QQHKEKLIN 197


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FSENKEKL 8
+SENKE++
Sbjct: 875 YSENKEQI 882


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 FSENKEKL 8
+SENKE++
Sbjct: 875 YSENKEQI 882


>sp|NADE_SACS2|NH(3)-DEPENDENT NAD(+) synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SENKEKLIN 10
++NK KLIN
Sbjct: 87 AQNKYKLIN 95




81|Sequence|401|410|EKLINNAITA

>sp|SYDND_META3|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EKLINNAIT 9
EK+INNA T
Sbjct: 253 EKVINNAFT 261


>sp|ARFB_METJA|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus jannaschii (strain

Query: 1 EKLINNAI 8
EK++NNAI
Sbjct: 206 EKILNNAI 213


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKLINNAITA 10
EKL+ NA+T+
Sbjct: 66 EKLLINAVTS 75


>sp|TRM1_METJA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocaldococcus

Query: 1 EKLINNA 7
EK+INNA
Sbjct: 93 EKIINNA 99




82|Sequence|406|415|NAITALLSQE

>sp|FTSY_METJA|SIGNAL recognition particle receptor FtsY|Methanocaldococcus jannaschii

Query: 1 NAITALLSQE 10
NAI +LSQE
Sbjct: 176 NAIKNILSQE 185


>sp|PANE_PYRAE|2-DEHYDROPANTOATE 2-reductase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NAITALL 7
NAITALL
Sbjct: 166 NAITALL 172




83|Sequence|411|420|LLSQEGDVVA

>sp|Y988_METJA|UNCHARACTERIZED protein MJ0988|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLSQEGDV 8
LLSQE DV
Sbjct: 188 LLSQESDV 195


>sp|NTPTH_CALMQ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LLSQEGDV 8
LL+QEGD+
Sbjct: 90 LLNQEGDL 97


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LLSQEGDVV 9
+LS+EGDV+
Sbjct: 55 VLSREGDVL 63


>sp|MOAC_PYRAE|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrobaculum aerophilum

Query: 2 LSQEGDVVA 10
+++EGD+VA
Sbjct: 120 ITREGDLVA 128


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LLSQEGDVVA 10
L+ EGD+VA
Sbjct: 237 LMESEGDLVA 246


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 LSQEGDVV 9
L +EGDVV
Sbjct: 95 LCEEGDVV 102


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LLSQEGDVVA 10
+ Q GDVVA
Sbjct: 20 VFDQHGDVVA 29


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LLSQEGDVVA 10
+ Q GDVVA
Sbjct: 20 VFDQHGDVVA 29


>sp|SUCC_PYRCJ|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum calidifontis (strain

Query: 2 LSQEGDVV 9
L++EGDVV
Sbjct: 197 LTKEGDVV 204


>sp|GMHA_METJA|PROBABLE phosphoheptose isomerase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LSQEGDVVA 10
L +EGDV+A
Sbjct: 104 LGKEGDVLA 112


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LSQEGDVV 9
++QEGD+V
Sbjct: 655 MTQEGDMV 662


>sp|CBID_SULTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LLSQEGDVVA 10
++S+EG+V+A
Sbjct: 336 IISEEGEVLA 345


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 SQEGDVV 9
S+EGDV+
Sbjct: 321 SEEGDVI 327




84|Sequence|416|425|GDVVASNAEL

>sp|COFE_METKA|COENZYME F420:L-glutamate ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 GDVVASNAEL 10
GD++AS AEL
Sbjct: 200 GDLLASAAEL 209


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDVVASNAEL 10
GDV NAE+
Sbjct: 97 GDVEIKNAEI 106


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 1 GDVVASNAEL 10
G+V A NAE+
Sbjct: 659 GEVEAKNAEM 668




85|Sequence|421|430|SNAELESQFQ

***** No hits found ******


86|Sequence|426|435|ESQFQAVRRL

***** No hits found ******


87|Sequence|431|440|AVRRLVASKA

>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 1 AVRRLVAS 8
A RRLVAS
Sbjct: 803 ATRRLVAS 810


>sp|HIS1_METAR|ATP phosphoribosyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 3 RRLVASKA 10
+RL+ASKA
Sbjct: 180 QRLIASKA 187




88|Sequence|436|445|VASKAGFLAF

>sp|HDRC_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit C|Methanothermobacter

Query: 2 ASKAGFLA 9
A+KAGF+A
Sbjct: 106 AAKAGFMA 113


>sp|HDRC_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit C|Methanothermobacter

Query: 2 ASKAGFLA 9
A+KAGF+A
Sbjct: 106 AAKAGFMA 113


>sp|PUR1_ARCFU|AMIDOPHOSPHORIBOSYLTRANSFERASE fulgidus (strain ATCC 49558

Query: 1 VASKAGFLA 9
V SKAG++A
Sbjct: 91 VKSKAGYIA 99


>sp|TMPS_METJA|THYMIDYLATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VASKAGFLAF 10
+ KAG++AF
Sbjct: 242 ILHKAGYIAF 251




89|Sequence|441|450|GFLAFTQLPK

>sp|AATB_METLZ|A-TYPE ATP synthase subunit B|Methanocorpusculum labreanum (strain ATCC

Query: 1 GFLAFTQLPK 10
G+ FTQLP+
Sbjct: 428 GWGMFTQLPE 437


>sp|METK_SACI7|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GFLAFTQLPK 10
GF FT+L K
Sbjct: 166 GFAPFTKLEK 175


>sp|METK_SACI6|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GFLAFTQLPK 10
GF FT+L K
Sbjct: 166 GFAPFTKLEK 175


>sp|METK_SACI4|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GFLAFTQLPK 10
GF FT+L K
Sbjct: 166 GFAPFTKLEK 175


>sp|METK_SACI3|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GFLAFTQLPK 10
GF FT+L K
Sbjct: 166 GFAPFTKLEK 175


>sp|METK_SACI2|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GFLAFTQLPK 10
GF FT+L K
Sbjct: 166 GFAPFTKLEK 175


>sp|METK_SACI1|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GFLAFTQLPK 10
GF FT+L K
Sbjct: 166 GFAPFTKLEK 175




90|Sequence|446|455|TQLPKFRERL

>sp|PYRDB_METKA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanopyrus kandleri (strain

Query: 3 LPKFRERL 10
LP++RERL
Sbjct: 304 LPEYRERL 311


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QLPKFRERL 10
QLPKF+E +
Sbjct: 209 QLPKFKEDM 217


>sp|ENDA_SULTO|TRNA-SPLICING endonuclease|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TQLPKFR 7
TQ+P+FR
Sbjct: 82 TQIPRFR 88


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PKFRERL 10
PKFRE+L
Sbjct: 160 PKFREKL 166


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 4 PKFRERL 10
PKFRE+L
Sbjct: 163 PKFREKL 169


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 LPKFRERL 10
LPKF ERL
Sbjct: 190 LPKFSERL 197


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TQLPKFRERL 10
T LP+ RE+L
Sbjct: 182 TALPEAREKL 191


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PKFRERL 10
P FRERL
Sbjct: 352 PLFRERL 358


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TQLPKFRERL 10
T++P+ RER+
Sbjct: 769 TEMPEVRERV 778


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QLPKFRERL 10
QLPKF++ +
Sbjct: 209 QLPKFKDDM 217


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QLPKFRERL 10
QLPKF++ +
Sbjct: 209 QLPKFKDDM 217


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 2 QLPKFRERL 10
LP+FRE L
Sbjct: 281 HLPEFREPL 289


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 4 PKFRERL 10
PKF ERL
Sbjct: 164 PKFSERL 170


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM 12597

Query: 3 LPKFRER 9
+PKFRE+
Sbjct: 321 VPKFREK 327


>sp|RS4_METKA|SMALL ribosomal subunit protein uS4|Methanopyrus kandleri (strain AV19

Query: 1 TQLPKFRER 9
TQL ++RER
Sbjct: 46 TQLKRWRER 54


>sp|DNAG_METBU|DNA primase DnaG|Methanococcoides burtonii (strain DSM 6242

Query: 1 TQLPKFRER 9
T+LPK +ER
Sbjct: 295 TRLPKRKER 303




91|Sequence|451|460|FRERLGVKVV

>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FRERLGVKVV 10
FRER+G K V
Sbjct: 706 FRERIGAKSV 715


>sp|AROE_PYRAE|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 ERLGVKVV 10
ERLGVKVV
Sbjct: 218 ERLGVKVV 225


>sp|RIFK_HALWD|RIBOFLAVIN kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FRERLG 6
FRERLG
Sbjct: 125 FRERLG 130


>sp|KAD6_METJA|PUTATIVE adenylate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FRERLGVKVV 10
R+RLG+KV+
Sbjct: 20 LRDRLGIKVI 29


>sp|Y1504_ARCFU|UNCHARACTERIZED protein AF_1504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RERLGVKV 9
RE+LGVKV
Sbjct: 185 REKLGVKV 192


>sp|RIFK_NATPD|RIBOFLAVIN kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FRERLG 6
FRERLG
Sbjct: 124 FRERLG 129


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 ERLGVKVV 10
ERLGVK +
Sbjct: 321 ERLGVKFI 328


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FRERLGVKVV 10
F ++LG+KV+
Sbjct: 186 FGKKLGIKVI 195


>sp|AROE_PYRNV|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 ERLGVKVV 10
+RLG+KVV
Sbjct: 216 QRLGIKVV 223


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FRERLGVKVV 10
+E LGVKVV
Sbjct: 921 LQEELGVKVV 930


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FRERLGVKV 9
F+ER+GV V
Sbjct: 111 FQERIGVDV 119


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 2|Methanocaldococcus

Query: 2 RERLGVK 8
R+RLGVK
Sbjct: 153 RDRLGVK 159


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 1 FRERLGVKV 9
F+ER+GV +
Sbjct: 113 FQERIGVDI 121


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 3 ERLGVKVV 10
E++GVKVV
Sbjct: 235 EKMGVKVV 242


>sp|AROE_PYRIL|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum islandicum (strain DSM 4184

Query: 3 ERLGVKVV 10
+RLG+KV+
Sbjct: 216 QRLGIKVI 223


>sp|WTPA_PYRHO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RERLGVKV 9
+E+LGVKV
Sbjct: 54 QEKLGVKV 61


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 3 ERLGVKVV 10
+RLGV+VV
Sbjct: 36 QRLGVEVV 43


>sp|Y1787_ARCFU|PUTATIVE HTH-type transcriptional regulatory protein|Archaeoglobus fulgidus

Query: 2 RERLGVKV 9
RERLG+ V
Sbjct: 135 RERLGLSV 142


>sp|Y759_PYRIL|UPF0210 protein Pisl_0759|Pyrobaculum islandicum (strain DSM 4184

Query: 3 ERLGVKVV 10
RLGVK+V
Sbjct: 66 SRLGVKIV 73


>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 2 RERLGVKVV 10
RE+ GVK +
Sbjct: 234 REKFGVKTI 242


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 3 ERLGVKVV 10
+RLGV+VV
Sbjct: 36 QRLGVEVV 43


>sp|GCH1L_ARCFU|GTP cyclohydrolase 1 type 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RERLGVKVV 10
RE+LG++ V
Sbjct: 229 REKLGIEAV 237


>sp|GUAAB_METJA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocaldococcus

Query: 1 FRERLGVKVV 10
FR++LG+ ++
Sbjct: 71 FRDKLGLNLI 80


>sp|PYRF_METTH|OROTIDINE 5'-phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 1 FRERLGVKVV 10
FR+R G +++
Sbjct: 59 FRKRFGCRII 68


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 3 ERLGVKVV 10
ERLG+KV
Sbjct: 92 ERLGLKVA 99




92|Sequence|456|465|GVKVVKALKR

>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GVKVVKALKR 10
G++VV LKR
Sbjct: 305 GIRVVVELKR 314


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVKVVKALK 9
G+K++KA+K
Sbjct: 573 GLKLIKAVK 581


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GVKVVKALKR 10
G KVV ALKR
Sbjct: 1050 GEKVVIALKR 1059


>sp|Y1808_ARCFU|UNCHARACTERIZED protein AF_1808|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVKVVKALK 9
G+K +KALK
Sbjct: 66 GIKALKALK 74


>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GVKVVKALKR 10
G+K++ LK+
Sbjct: 61 GIKIINELKK 70


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVKVVKALKR 10
G K+V ALKR
Sbjct: 261 GSKIVLALKR 270




93|Sequence|461|470|KALKRSNNGI

>sp|ARE_SACSO|ARYLESTERASE solfataricus (Sulfolobus solfataricus)

Query: 3 LKRSNNGI 10
+KR+NNG+
Sbjct: 70 IKRTNNGL 77


>sp|TYW32_PYRAB|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 ALKRSNNGI 10
ALK++N GI
Sbjct: 79 ALKKANKGI 87


>sp|HCGF_METM7|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 3 LKRSNNGI 10
LKR NGI
Sbjct: 140 LKRQENGI 147


>sp|HCGF_METM6|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 3 LKRSNNGI 10
LKR +NG+
Sbjct: 140 LKRQDNGV 147




94|Sequence|466|475|SNNGIIHAAV

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SNNGII 6
SNNGII
Sbjct: 3 SNNGII 8


>sp|RL1_PYRFU|LARGE ribosomal subunit protein uL1|Pyrococcus furiosus (strain ATCC

Query: 2 NNGIIHAAV 10
NN ++HA V
Sbjct: 159 NNPVVHAPV 167


>sp|RL1_PYRAB|LARGE ribosomal subunit protein uL1|Pyrococcus abyssi (strain GE5 /

Query: 2 NNGIIHAAV 10
NN ++HA V
Sbjct: 162 NNPVVHAPV 170


>sp|CDC61_THEAC|PUTATIVE ORC1-type DNA replication protein|Thermoplasma acidophilum (strain

Query: 2 NNGIIHAAV 10
NNGII +++
Sbjct: 306 NNGIISSSI 314


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NGIIHAA 9
+GI+HAA
Sbjct: 316 SGIVHAA 322


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NGIIHAA 9
+GI+HAA
Sbjct: 316 SGIVHAA 322


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 NNGIIHAA 9
N GI+H A
Sbjct: 320 NTGIVHIA 327


>sp|RL1_THEKO|LARGE ribosomal subunit protein uL1|Thermococcus kodakarensis (strain

Query: 2 NNGIIHAAV 10
NN ++HA +
Sbjct: 159 NNPVVHAPI 167


>sp|CSL4_SACS2|EXOSOME complex component Csl4|Saccharolobus solfataricus (strain ATCC

Query: 3 NGIIHAAV 10
NGI+ AAV
Sbjct: 30 NGIVRAAV 37




95|Sequence|471|480|IHAAVDMLCA

>sp|RS10_THEVO|SMALL ribosomal subunit protein uS10|Thermoplasma volcanium (strain

Query: 2 HAAVDMLCA 10
H VDM+C+
Sbjct: 15 HKIVDMVCS 23


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 1 IHAAVDMLC 9
+H+ V M+C
Sbjct: 291 LHSKVSMIC 299


>sp|ARGC_METPE|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IHAAVDMLCA 10
+H+A +++CA
Sbjct: 22 MHSAAEVVCA 31




96|Sequence|476|485|DMLCALMCPM

>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DMLCALMCP 9
D+LC LM P
Sbjct: 668 DVLCRLMAP 676


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 3 LCALMCP 9
+CALMCP
Sbjct: 589 VCALMCP 595


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 4 CALMCP 9
CA+MCP
Sbjct: 61 CAVMCP 66


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 DMLCALMC 8
D +CA++C
Sbjct: 250 DRMCAIIC 257


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 DMLCALMC 8
D +CA++C
Sbjct: 250 DRMCAIIC 257


>sp|FER_PYRAB|FERREDOXIN abyssi (strain GE5 /

Query: 1 DMLCALMCP 9
D +CA +CP
Sbjct: 15 DAICASLCP 23


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 4 CALMCP 9
C+L CP
Sbjct: 170 CSLFCP 175


>sp|FER_PYRFU|FERREDOXIN furiosus (strain ATCC 43587

Query: 1 DMLCALMCP 9
D +CA +CP
Sbjct: 15 DAICASLCP 23


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 4 CALMCP 9
C+L CP
Sbjct: 166 CSLFCP 171


>sp|FER_THEKO|FERREDOXIN kodakarensis (strain ATCC BAA-918

Query: 1 DMLCALMCP 9
D +CA +CP
Sbjct: 15 DAICASLCP 23


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 CALMCP 9
CAL CP
Sbjct: 420 CALACP 425


>sp|FER9_METJA|UNCHARACTERIZED ferredoxin MJ0265|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LCALMCPM 10
LCAL CP
Sbjct: 82 LCALACPF 89


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 3 LCALMCP 9
+CA MCP
Sbjct: 588 VCAKMCP 594


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 3 LCALMCP 9
LC L CP
Sbjct: 296 LCQLACP 302


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 3 LCALMCP 9
LC L CP
Sbjct: 296 LCQLACP 302




97|Sequence|481|490|LMCPMHDDYD

>sp|RIBL_METIM|FAD synthase|Methanocaldococcus infernus (strain DSM 11812

Query: 1 LMCPMHDDYD 10
+ CP H YD
Sbjct: 123 IKCPFHSSYD 132


>sp|RIBL_METV3|FAD synthase|Methanococcus voltae (strain ATCC BAA-1334

Query: 3 CPMHDDYD 10
CP H YD
Sbjct: 150 CPFHSSYD 157


>sp|RIBL_METM5|FAD synthase|Methanococcus maripaludis (strain C5 /

Query: 3 CPMHDDYD 10
CP H YD
Sbjct: 127 CPFHSSYD 134


>sp|RIBL_METMP|FAD synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 CPMHDDYD 10
CP H YD
Sbjct: 127 CPFHSSYD 134


>sp|RIBL_METM6|FAD synthase|Methanococcus maripaludis (strain C6 /

Query: 3 CPMHDDYD 10
CP H YD
Sbjct: 127 CPFHSSYD 134


>sp|Y1314_ARCFU|UNCHARACTERIZED protein AF_1314|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CPMHD 7
CPMHD
Sbjct: 151 CPMHD 155


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 CPMHDDYD 10
CPM YD
Sbjct: 513 CPMSKQYD 520


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 MCPMHDDY 9
MC H DY
Sbjct: 8 MCTQHPDY 15


>sp|FEN_PICTO|FLAP endonuclease 1|Picrophilus torridus (strain ATCC 700027

Query: 1 LMCPMHDDYD 10
M P H+DY+
Sbjct: 280 FMNPPHNDYE 289


>sp|Y2154_ARCFU|UPF0179 protein AF_2154|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CPMHD 7
CP+HD
Sbjct: 63 CPLHD 67


>sp|ISF2_METJA|IRON-SULFUR flavoprotein MJ1083|Methanocaldococcus jannaschii (strain ATCC

Query: 3 CPMHDDYD 10
CP+ DD D
Sbjct: 59 CPIIDDVD 66


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC 51178

Query: 2 MCPMHDD 8
+CP+H D
Sbjct: 1078 VCPIHGD 1084


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 MCPMHDD 8
+CP+H D
Sbjct: 1078 VCPIHGD 1084


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 2 MCPMHDD 8
+CP+H D
Sbjct: 1077 VCPVHGD 1083


>sp|FDHD_THEVO|SULFUR carrier protein FdhD|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PMHDDY 9
P+HDD+
Sbjct: 58 PVHDDW 63


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 4 PMHDDYD 10
P+H D+D
Sbjct: 457 PLHPDFD 463


>sp|DCDB_METVS|DCTP deaminase, dUMP-forming|Methanococcus vannielii (strain ATCC

Query: 1 LMCPMHDDYD 10
++CP+H D
Sbjct: 66 MVCPLHHHLD 75


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 1 LMCPMHDD 8
LMC H D
Sbjct: 6 LMCTQHPD 13


>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LMCPMHDD 8
LMC H D
Sbjct: 5 LMCTQHPD 12


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LMCPMHDD 8
LMC H D
Sbjct: 6 LMCTQHPD 13


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LMCPMHDD 8
LMC H D
Sbjct: 6 LMCTQHPD 13


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 3 CPMHDDY 9
CP H D+
Sbjct: 227 CPAHPDW 233


>sp|SURE_PICTO|5'-NUCLEOTIDASE SurE|Picrophilus torridus (strain ATCC 700027

Query: 3 CPMHDDYD 10
CP + DYD
Sbjct: 209 CPENCDYD 216


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LMCPMHDD 8
LMC H D
Sbjct: 7 LMCTQHPD 14


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 3 CPMHDDY 9
CP H D+
Sbjct: 227 CPCHPDW 233


>sp|Y220_METTP|UPF0179 protein Mthe_0220|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 CPMHDD 8
CP+H++
Sbjct: 62 CPLHEE 67




98|Sequence|486|495|HDDYDLRQEQ

>sp|ARTA_HALVD|ARCHAEOSORTASE A|Haloferax volcanii (strain ATCC 29605

Query: 2 DDYDLRQE 9
D+YDLR E
Sbjct: 292 DEYDLRNE 299


>sp|DNAG_IGNH4|DNA primase DnaG|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DDYDLRQEQ 10
DD+DLR+ Q
Sbjct: 34 DDFDLRELQ 42


>sp|RL10E_STAMF|LARGE ribosomal subunit protein uL16|Staphylothermus marinus (strain

Query: 1 HDDYDLRQE 9
H DYD R E
Sbjct: 40 HGDYDYRAE 48


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 3 DYDLRQE 9
DYDLR E
Sbjct: 103 DYDLRDE 109


>sp|DNAG_SULAC|DNA primase DnaG|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DDYDLRQEQ 10
DD+DLR+ Q
Sbjct: 34 DDFDLRELQ 42


>sp|MAP2_PYRAB|METHIONINE aminopeptidase|Pyrococcus abyssi (strain GE5 /

Query: 1 HDDYDLRQ 8
HD+Y LR+
Sbjct: 173 HDNYKLRE 180


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HDDYDLRQ 8
H DYD+++
Sbjct: 4 HGDYDIKK 11


>sp|THI4_PYRFU|THIAMINE thiazole synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DDYDLRQEQ 10
D++D+R E+
Sbjct: 84 DEFDIRYEE 92


>sp|THI4_PYRAB|THIAMINE thiazole synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 DDYDLRQEQ 10
D++D+R E+
Sbjct: 84 DEFDIRYEE 92


>sp|DNAG_SACI7|DNA primase DnaG|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DDYDLRQEQ 10
D++DLR+ Q
Sbjct: 34 DEFDLRELQ 42


>sp|DNAG_SACI6|DNA primase DnaG|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DDYDLRQEQ 10
D++DLR+ Q
Sbjct: 34 DEFDLRELQ 42


>sp|DNAG_SACI4|DNA primase DnaG|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DDYDLRQEQ 10
D++DLR+ Q
Sbjct: 34 DEFDLRELQ 42


>sp|DNAG_SACI3|DNA primase DnaG|Saccharolobus islandicus (strain M.16.27)

Query: 2 DDYDLRQEQ 10
D++DLR+ Q
Sbjct: 34 DEFDLRELQ 42


>sp|DNAG_SACI2|DNA primase DnaG|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DDYDLRQEQ 10
D++DLR+ Q
Sbjct: 34 DEFDLRELQ 42


>sp|DNAG_SACI1|DNA primase DnaG|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DDYDLRQEQ 10
D++DLR+ Q
Sbjct: 34 DEFDLRELQ 42


>sp|HMAT_HALSA|HEME-BASED aerotactic transducer HemAT|Halobacterium salinarum (strain ATCC

Query: 1 HDDYDLRQE 9
HD+ D RQE
Sbjct: 198 HDEIDSRQE 206


>sp|DNAG_SACS2|DNA primase DnaG|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DDYDLRQEQ 10
D++DLR+ Q
Sbjct: 38 DEFDLRELQ 46


>sp|DNAG_THEKO|DNA primase DnaG|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DDYDLRQEQ 10
DD DLR+ Q
Sbjct: 67 DDLDLRELQ 75


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DDYDLRQEQ 10
DD DLR+ Q
Sbjct: 68 DDLDLRELQ 76


>sp|DNAG_THEON|DNA primase DnaG|Thermococcus onnurineus (strain NA1)

Query: 2 DDYDLRQEQ 10
DD DLR+ Q
Sbjct: 69 DDLDLRELQ 77


>sp|DNAG_PYRFU|DNA primase DnaG|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DDYDLRQEQ 10
DD DLR+ Q
Sbjct: 69 DDLDLRELQ 77


>sp|DNAG_PYRAB|DNA primase DnaG|Pyrococcus abyssi (strain GE5 /

Query: 2 DDYDLRQEQ 10
DD DLR+ Q
Sbjct: 69 DDLDLRELQ 77


>sp|DNAG_PYRHO|DNA primase DnaG|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DDYDLRQEQ 10
DD DLR+ Q
Sbjct: 69 DDLDLRELQ 77




99|Sequence|491|500|LRQEQLNKAS

>sp|PFDA_METS5|PREFOLDIN subunit alpha|Metallosphaera sedula (strain ATCC 51363

Query: 2 RQEQLNKA 9
R+EQLNK+
Sbjct: 106 REEQLNKS 113


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LRQEQLNKA 9
L QEQ NKA
Sbjct: 370 LAQEQWNKA 378




100|Sequence|496|505|LNKASLLSSK

>sp|RAD50_NANEQ|DNA double-strand break repair Rad50|Nanoarchaeum equitans (strain

Query: 1 LNKASLLSSK 10
LNK SLL +K
Sbjct: 198 LNKKSLLENK 207




101|Sequence|501|510|LLSSKKFLEN

>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LLSSKKFLEN 10
L +KKFLEN
Sbjct: 414 LDEAKKFLEN 423


>sp|RNH2_METBU|RIBONUCLEASE HII|Methanococcoides burtonii (strain DSM 6242

Query: 4 SKKFLEN 10
+KKFLEN
Sbjct: 183 TKKFLEN 189


>sp|RS2_META3|SMALL ribosomal subunit protein uS2|Methanococcus aeolicus (strain ATCC

Query: 3 SSKKFLE 9
SS+KFLE
Sbjct: 106 SSRKFLE 112


>sp|Y589_METJA|UNCHARACTERIZED protein MJ0589|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLSSKKFLEN 10
+L K+F+EN
Sbjct: 55 VLGKKRFVEN 64




102|Sequence|506|515|KFLENLLEKF

>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 KFLENLLEKF 10
KF+++LLEKF
Sbjct: 885 KFVDDLLEKF 894


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 KFLENLLEKF 10
KF+++LLEKF
Sbjct: 888 KFVDDLLEKF 897


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 KFLENLLEKF 10
KF+++LLEK+
Sbjct: 815 KFIDDLLEKY 824


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 KFLENLLEKF 10
KF+++LLEK+
Sbjct: 815 KFIDDLLEKY 824


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 KFLENLLEKF 10
KF+++LLEK+
Sbjct: 815 KFIDDLLEKY 824


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 KFLENLLEKF 10
KF+++LLEK+
Sbjct: 815 KFIDDLLEKY 824


>sp|Y687_METJA|UNCHARACTERIZED protein MJ0687|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFLENLLEKF 10
KF++++LEKF
Sbjct: 118 KFIKSMLEKF 127


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LENLLEKF 10
LENL+EK+
Sbjct: 319 LENLIEKY 326


>sp|FTSZ1_METJA|CELL division protein FtsZ 1|Methanocaldococcus jannaschii (strain

Query: 1 KFLENLLEK 9
KFL+N+LE+
Sbjct: 2 KFLKNVLEE 10


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KFLENLLEK 9
+F+E L+EK
Sbjct: 122 RFIEGLIEK 130


>sp|Y1021_METJA|UNCHARACTERIZED protein MJ1021|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLENLLEKF 10
+LEN+LE F
Sbjct: 39 YLENILEDF 47


>sp|AATE_ARCFU|A-TYPE ATP synthase subunit E|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KFLENLLEK 9
K L+NLLEK
Sbjct: 103 KILKNLLEK 111


>sp|TMBL2_THEKO|DNA-BINDING HTH-type transcriptional repressor TrmBL2|Thermococcus

Query: 4 ENLLEKF 10
EN+LEKF
Sbjct: 78 ENILEKF 84


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 KFLENLLEKF 10
KFL+ L+E +
Sbjct: 233 KFLDELIEAY 242


>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 ENLLEKF 10
EN+LE+F
Sbjct: 104 ENILERF 110


>sp|Y580_METJA|UNCHARACTERIZED protein MJ0580|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLENLLEKF 10
FLE LEKF
Sbjct: 109 FLEGKLEKF 117


>sp|HIS7_METST|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KFLENLLEKF 10
KF +++LE F
Sbjct: 36 KFFDHMLESF 45




103|Sequence|511|520|LLEKFNSHVD

>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LLEKFNSHVD 10
L+E+F HVD
Sbjct: 232 LMEEFRPHVD 241


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 1 LLEKFNSHV 9
LLEK+NS +
Sbjct: 512 LLEKYNSEI 520


>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 1 LLEKFNSHVD 10
L+EKFN +++
Sbjct: 77 LMEKFNEYLN 86


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 1 LLEKFNSHVD 10
L+EKF+ H++
Sbjct: 43 LVEKFSLHLE 52


>sp|LEU3_SACS2|3-ISOPROPYLMALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLEKFNSHVD 10
L+EK+N +D
Sbjct: 28 LIEKYNLDID 37


>sp|Y144_METJA|UNCHARACTERIZED protein MJ0144|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LEKFNSHV 9
LE+FNS++
Sbjct: 69 LEEFNSYI 76




104|Sequence|516|525|NSHVDHGTGA

>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 32 AHVDHG 37


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 32 AHVDHG 37


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 32 AHVDHG 37


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 32 AHVDHG 37


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 32 AHVDHG 37


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_KORCO|ELONGATION factor 2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 28 AHVDHG 33


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 28 AHVDHG 33


>sp|Y2383_SULTO|UNCHARACTERIZED protein STK_23830|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NSHVDHGTG 9
NS+++HG G
Sbjct: 23 NSYLEHGGG 31


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 27 AHVDHG 32


>sp|IF2P_THEVO|PROBABLE translation initiation factor IF-2|Thermoplasma volcanium (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 24 HVDHG 28


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 14 HVDHG 18


>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus

Query: 3 HVDHG 7
HVDHG
Sbjct: 14 HVDHG 18


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|IF2P_THEAC|PROBABLE translation initiation factor IF-2|Thermoplasma acidophilum

Query: 3 HVDHG 7
HVDHG
Sbjct: 24 HVDHG 28


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii

Query: 3 HVDHG 7
HVDHG
Sbjct: 20 HVDHG 24


>sp|IF2P_SULAC|PROBABLE translation initiation factor IF-2|Sulfolobus acidocaldarius

Query: 3 HVDHG 7
HVDHG
Sbjct: 19 HVDHG 23


>sp|IF2P_STAMF|PROBABLE translation initiation factor IF-2|Staphylothermus marinus

Query: 3 HVDHG 7
HVDHG
Sbjct: 21 HVDHG 25


>sp|IF2P_SACS2|PROBABLE translation initiation factor IF-2|Saccharolobus solfataricus

Query: 3 HVDHG 7
HVDHG
Sbjct: 20 HVDHG 24


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 14 HVDHG 18


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii

Query: 3 HVDHG 7
HVDHG
Sbjct: 13 HVDHG 17


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 3 HVDHG 7
HVDHG
Sbjct: 28 HVDHG 32


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 3 HVDHG 7
HVDHG
Sbjct: 13 HVDHG 17


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 3 HVDHG 7
HVDHG
Sbjct: 13 HVDHG 17


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 18 HVDHG 22


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 3 HVDHG 7
HVDHG
Sbjct: 13 HVDHG 17


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 HVDHG 7
HVDHG
Sbjct: 13 HVDHG 17


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|IF2P_METMA|PROBABLE translation initiation factor IF-2|Methanosarcina mazei (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 HVDHG 7
HVDHG
Sbjct: 13 HVDHG 17


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 HVDHG 7
HVDHG
Sbjct: 13 HVDHG 17


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 HVDHG 7
HVDHG
Sbjct: 13 HVDHG 17


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 18 HVDHG 22


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 3 HVDHG 7
HVDHG
Sbjct: 25 HVDHG 29


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 3 HVDHG 7
HVDHG
Sbjct: 28 HVDHG 32


>sp|IF2P_METBF|PROBABLE translation initiation factor IF-2|Methanosarcina barkeri (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 16 HVDHG 20


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 21 HVDHG 25


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 3 HVDHG 7
HVDHG
Sbjct: 23 HVDHG 27


>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 13 HVDHG 17


>sp|IF2P_IGNH4|PROBABLE translation initiation factor IF-2|Ignicoccus hospitalis (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 22 HVDHG 26


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 21 HVDHG 25


>sp|IF2P_ARCFU|PROBABLE translation initiation factor IF-2|Archaeoglobus fulgidus (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 21 HVDHG 25


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 24 HVDHG 28


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 3 HVDHG 7
HVDHG
Sbjct: 19 HVDHG 23


>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 19 HVDHG 23


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 19 HVDHG 23


>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 HVDHG 7
HVDHG
Sbjct: 19 HVDHG 23


>sp|IF2G_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 33 HVDHG 37


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 HVDHG 7
HVDHG
Sbjct: 18 HVDHG 22


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 HVDHG 7
HVDHG
Sbjct: 14 HVDHG 18


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 3 HVDHG 7
HVDHG
Sbjct: 14 HVDHG 18


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 HVDHG 7
HVDHG
Sbjct: 16 HVDHG 20


>sp|EF1A_HYPBU|ELONGATION factor 1-alpha|Hyperthermus butylicus (strain DSM 5456

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 3 HVDHG 7
HVDHG
Sbjct: 16 HVDHG 20


>sp|EF1A_CALMQ|ELONGATION factor 1-alpha|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 HVDHG 7
HVDHG
Sbjct: 24 HVDHG 28


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 3 HVDHG 7
HVDHG
Sbjct: 14 HVDHG 18


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 19 HVDHG 23


>sp|Y1111_PYRAE|UNCHARACTERIZED protein PAE1111|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NSHVDHGTG 9
NS+++HG G
Sbjct: 30 NSYLEHGGG 38


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 27 AHIDHG 32


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 16 HVDHG 20


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 19 HVDHG 23


>sp|EF1A_ARCFU|ELONGATION factor 1-alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 25 HVDHG 29


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 HVDHG 7
HVDHG
Sbjct: 14 HVDHG 18


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF1A_PYRWO|ELONGATION factor 1-alpha|Pyrococcus woesei

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|IF2G_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter

Query: 3 HVDHG 7
HVDHG
Sbjct: 14 HVDHG 18


>sp|EF1A_PYRFU|ELONGATION factor 1-alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF1A_THECE|ELONGATION factor 1-alpha|Thermococcus celer

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF1A_PYRAB|ELONGATION factor 1-alpha|Pyrococcus abyssi (strain GE5 /

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF1A_THEGJ|ELONGATION factor 1-alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF1A_THEON|ELONGATION factor 1-alpha|Thermococcus onnurineus (strain NA1)

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF1A_PYRHO|ELONGATION factor 1-alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF1A_NANEQ|ELONGATION factor 1-alpha|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 HVDHG 7
HVDHG
Sbjct: 18 HVDHG 22


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|IF2P_HALMA|PROBABLE translation initiation factor IF-2|Haloarcula marismortui (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 24 HVDHG 28


>sp|IF2G_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 3 HVDHG 7
HVDHG
Sbjct: 16 HVDHG 20


>sp|EF1A_THEKO|ELONGATION factor 1-alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|IF2P_HALLT|PROBABLE translation initiation factor IF-2|Halorubrum lacusprofundi

Query: 3 HVDHG 7
HVDHG
Sbjct: 20 HVDHG 24


>sp|FLAH_SULAC|ARCHAEAL flagellar ATP-binding protein FlaH|Sulfolobus acidocaldarius

Query: 5 DHGTG 9
DHGTG
Sbjct: 28 DHGTG 32


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 19 HVDHG 23


>sp|SELB_METJA|SELENOCYSTEINE-SPECIFIC elongation factor|Methanocaldococcus jannaschii (strain ATCC

Query: 3 HVDHG 7
H+DHG
Sbjct: 17 HIDHG 21


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 3 HVDHG 7
H+DHG
Sbjct: 15 HIDHG 19


>sp|IF2G_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5

Query: 3 HVDHG 7
HVDHG
Sbjct: 16 HVDHG 20


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 16 HVDHG 20


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF1A_THESM|ELONGATION factor 1-alpha|Thermococcus sibiricus (strain DSM 12597

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|Y1252_SULAC|UNCHARACTERIZED protein Saci_1252|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NSHVDHGTG 9
NS++ HG G
Sbjct: 33 NSYLSHGGG 41


>sp|Y2899_SACS2|UNCHARACTERIZED protein SSO2899|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NSHVDHGTG 9
NS++ HG G
Sbjct: 30 NSYLQHGGG 38


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 28 AHVDHG 33


>sp|IF2G_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6

Query: 3 HVDHG 7
HVDHG
Sbjct: 16 HVDHG 20


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 28 AHVDHG 33


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HVDHG 7
H+DHG
Sbjct: 14 HIDHG 18


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 3 HVDHG 7
H+DHG
Sbjct: 15 HIDHG 19


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7

Query: 3 HVDHG 7
HVDHG
Sbjct: 16 HVDHG 20


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 2 SHVDHG 7
+H+DHG
Sbjct: 28 AHIDHG 33


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 28 AHVDHG 33


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 28 AHVDHG 33


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 43 HVDHG 47


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 SHVDHGTG 9
S VDHG G
Sbjct: 443 SPVDHGAG 450


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 SHVDHG 7
+HVDHG
Sbjct: 28 AHVDHG 33


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 HVDHG 7
H+DHG
Sbjct: 15 HIDHG 19


>sp|IF2G_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|IF2G_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 19 HVDHG 23


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 3 HVDHG 7
HVDHG
Sbjct: 14 HVDHG 18


>sp|EF1A_METTH|ELONGATION factor 1-alpha|Methanothermobacter thermautotrophicus (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum

Query: 3 HVDHG 7
HVDHG
Sbjct: 23 HVDHG 27


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum

Query: 3 HVDHG 7
HVDHG
Sbjct: 23 HVDHG 27


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 HVDHG 7
H+DHG
Sbjct: 15 HIDHG 19


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 HVDHG 7
H+DHG
Sbjct: 15 HIDHG 19


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 3 HVDHG 7
HVDHG
Sbjct: 48 HVDHG 52


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 36 HVDHG 40


>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 3 HVDHG 7
H+DHG
Sbjct: 15 HIDHG 19


>sp|IF2G_HALLT|TRANSLATION initiation factor 2 subunit|Halorubrum lacusprofundi (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 HVDHG 7
H+DHG
Sbjct: 15 HIDHG 19


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 HVDHG 7
HVDHG
Sbjct: 15 HVDHG 19


>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 1 NSHVDHGTGA 10
NSHV+H A
Sbjct: 303 NSHVEHFEAA 312


>sp|Y941_METJA|TPR repeat-containing protein MJ0941|Methanocaldococcus jannaschii

Query: 1 NSHVDHG 7
N H DHG
Sbjct: 331 NIHKDHG 337


>sp|IF2G_HALWD|TRANSLATION initiation factor 2 subunit|Haloquadratum walsbyi (strain DSM

Query: 3 HVDHG 7
HVDHG
Sbjct: 17 HVDHG 21


>sp|IF2G_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 3 HVDHG 7
HVDHG
Sbjct: 16 HVDHG 20


>sp|PUR5_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 HVDHGTG 9
HV++GTG
Sbjct: 318 HVENGTG 324


>sp|EF1A_METMA|ELONGATION factor 1-alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HVDHG 7
H+DHG
Sbjct: 15 HIDHG 19


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 HVDHG 7
H+DHG
Sbjct: 15 HIDHG 19


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 3 HVDHG 7
H+DHG
Sbjct: 15 HIDHG 19




105|Sequence|521|530|HGTGALVISS

>sp|YR33_THEPE|UNCHARACTERIZED 33.4 kDa protein in|Thermofilum pendens

Query: 1 HGTGALVIS 9
HG GALV++
Sbjct: 250 HGIGALVVT 258


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 HGTGALVISS 10
H TG ++SS
Sbjct: 77 HATGGPIVSS 86


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 1 HGTGALVIS 9
HG G +V+S
Sbjct: 264 HGGGTVVVS 272


>sp|RL30E_METM7|LARGE ribosomal subunit protein eL30|Methanococcus maripaludis (strain

Query: 1 HGTGALVI 8
HG G LVI
Sbjct: 35 HGEGQLVI 42


>sp|RL30E_METM5|LARGE ribosomal subunit protein eL30|Methanococcus maripaludis (strain

Query: 1 HGTGALVI 8
HG G LVI
Sbjct: 35 HGEGQLVI 42


>sp|RL30E_METM6|LARGE ribosomal subunit protein eL30|Methanococcus maripaludis (strain

Query: 1 HGTGALVI 8
HG G LVI
Sbjct: 35 HGEGQLVI 42


>sp|RL30E_METMP|LARGE ribosomal subunit protein eL30|Methanococcus maripaludis (strain

Query: 1 HGTGALVI 8
HG G LVI
Sbjct: 29 HGEGQLVI 36


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 1 HGTGALVIS 9
+G+G+LVIS
Sbjct: 151 NGSGSLVIS 159


>sp|RL30E_METVS|LARGE ribosomal subunit protein eL30|Methanococcus vannielii (strain

Query: 1 HGTGALVI 8
HG G LVI
Sbjct: 35 HGEGKLVI 42


>sp|PSB_HALWD|PROTEASOME subunit beta|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HGTGALVIS 9
H TGAL I+
Sbjct: 87 HPTGALTIA 95




106|Sequence|526|535|LVISSLLDFL

>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VISSLLDFL 10
+I SLLDFL
Sbjct: 441 LIPSLLDFL 449


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VISSLLDFL 10
++ SLLDFL
Sbjct: 435 LLPSLLDFL 443


>sp|SYFB_METST|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VISSLLDFL 10
+I+SLL+FL
Sbjct: 424 LINSLLEFL 432


>sp|GCSPA_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 3 ISSLLDFL 10
ISS+LD+L
Sbjct: 4 ISSMLDYL 11


>sp|Y531_METTH|UNCHARACTERIZED protein MTH_531|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 VISSLLDFL 10
VISSLLD L
Sbjct: 237 VISSLLDDL 245




107|Sequence|531|540|LLDFLTFALC

>sp|Y889_METJA|UNCHARACTERIZED protein MJ0889|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DFLTFALC 10
DFL F +C
Sbjct: 33 DFLVFVIC 40




108|Sequence|536|545|TFALCAPYSE

>sp|Y657_ARCFU|UNCHARACTERIZED protein AF_0657|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TFALCAPY 8
TFA APY
Sbjct: 73 TFAFPAPY 80


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 1 TFALCAPY 8
TFA+ AP+
Sbjct: 207 TFAIIAPF 214


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 1 TFALCAPYSE 10
T ALC Y E
Sbjct: 162 TSALCGTYKE 171


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 3 ALCAPY 8
A CAPY
Sbjct: 194 AFCAPY 199




109|Sequence|541|550|APYSETTEGQ

>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 3 YSETTEGQ 10
Y ETTEG+
Sbjct: 354 YDETTEGR 361


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 3 YSETTEGQ 10
Y ETTEG+
Sbjct: 354 YDETTEGR 361


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 PYSETTEG 9
PYS T EG
Sbjct: 235 PYSYTVEG 242




110|Sequence|546|555|TTEGQQFDML

>sp|NFI_PYRAB|ENDONUCLEASE V|Pyrococcus abyssi (strain GE5 /

Query: 2 TEGQQFDML 10
T+G++FD+L
Sbjct: 84 TKGEEFDVL 92


>sp|NFI_PYRHO|ENDONUCLEASE V|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TEGQQFDML 10
T+G+ FD+L
Sbjct: 84 TKGETFDVL 92


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 GQQFDML 10
GQ FDML
Sbjct: 650 GQVFDML 656




111|Sequence|551|560|QFDMLLEMVA

>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QFDMLLEMV 9
QFD LLEM+
Sbjct: 206 QFDYLLEML 214


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 FDMLLEMVA 10
FD+LL+MV+
Sbjct: 979 FDILLDMVS 987


>sp|KAE1_SULTO|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfurisphaera tokodaii

Query: 2 FDMLLE 7
FDMLLE
Sbjct: 236 FDMLLE 241


>sp|KAE1_SULAC|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfolobus acidocaldarius

Query: 2 FDMLLE 7
FDMLLE
Sbjct: 236 FDMLLE 241


>sp|KAE1_SACS2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 2 FDMLLE 7
FDMLLE
Sbjct: 234 FDMLLE 239


>sp|KAE1_SACI7|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 FDMLLE 7
FDMLLE
Sbjct: 234 FDMLLE 239


>sp|KAE1_SACI2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 FDMLLE 7
FDMLLE
Sbjct: 234 FDMLLE 239


>sp|KAE1_SACI6|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 FDMLLE 7
FDMLLE
Sbjct: 234 FDMLLE 239


>sp|KAE1_SACI4|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 FDMLLE 7
FDMLLE
Sbjct: 234 FDMLLE 239


>sp|KAE1_SACI3|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 FDMLLE 7
FDMLLE
Sbjct: 234 FDMLLE 239


>sp|KAE1_SACI1|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 FDMLLE 7
FDMLLE
Sbjct: 234 FDMLLE 239


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QFDMLLEMV 9
+FD+LLE++
Sbjct: 197 RFDLLLEVI 205


>sp|SYFB_METST|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QFDMLLEMV 9
QFD +LE V
Sbjct: 366 QFDQILEQV 374




112|Sequence|556|565|LEMVASNGRT

>sp|CH60_METMA|CHAPERONIN GroEL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LEMVASNGRT 10
LE VAS GR+
Sbjct: 236 LEKVASEGRS 245


>sp|CH60_METBF|CHAPERONIN GroEL|Methanosarcina barkeri (strain Fusaro /

Query: 1 LEMVASNGRT 10
LE VAS GR+
Sbjct: 236 LEKVASEGRS 245


>sp|CH60_METAC|CHAPERONIN GroEL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LEMVASNGRT 10
LE VAS GR+
Sbjct: 236 LEKVASEGRS 245


>sp|CH60_METB6|CHAPERONIN GroEL|Methanoregula boonei (strain DSM 21154

Query: 1 LEMVASNGR 9
LEMVAS G+
Sbjct: 237 LEMVASEGK 245


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LEMVASNGR 9
+E+V+ NGR
Sbjct: 329 VELVSKNGR 337




113|Sequence|561|570|SNGRTLFKLF

>sp|RL2_THEPD|LARGE ribosomal subunit protein uL2|Thermofilum pendens (strain DSM 2475

Query: 1 SNGRTLFKL 9
SNG+TL +L
Sbjct: 137 SNGKTLIQL 145


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 NGRTLFKLF 10
NG+TL K F
Sbjct: 491 NGKTLMKEF 499


>sp|Y1664_METJA|UNCHARACTERIZED protein MJ1664|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SNGRTLFKLF 10
NG L+KLF
Sbjct: 27 DNGNNLYKLF 36


>sp|GUAAA_METMJ|GMP synthase [glutamine-hydrolyzing] subunit A|Methanoculleus

Query: 2 NGRTLFKLF 10
NGR LF+ F
Sbjct: 170 NGRLLFENF 178


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 NGRTLFKLF 10
NG+TL++ F
Sbjct: 564 NGQTLYERF 572


>sp|Y1535_METJA|UNCHARACTERIZED protein MJ1535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SNGRTLFKLF 10
SNG+ + K+F
Sbjct: 90 SNGKVVLKIF 99


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NGRTLFK 8
NG T+FK
Sbjct: 311 NGNTIFK 317




114|Sequence|566|575|LFKLFQHPSM

>sp|TAL_METMP|PROBABLE transaldolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LFKLFQHP 8
L KLF HP
Sbjct: 189 LDKLFNHP 196


>sp|TAL_METM7|PROBABLE transaldolase|Methanococcus maripaludis (strain C7 /

Query: 1 LFKLFQHP 8
L KLF HP
Sbjct: 189 LDKLFNHP 196


>sp|TAL_METM5|PROBABLE transaldolase|Methanococcus maripaludis (strain C5 /

Query: 1 LFKLFQHP 8
L KLF HP
Sbjct: 189 LDKLFNHP 196


>sp|TAL_METJA|PROBABLE transaldolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KLFQHP 8
KLF HP
Sbjct: 191 KLFNHP 196


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 2 FKLFQHP 8
FK++ HP
Sbjct: 136 FKIYTHP 142


>sp|FEN_METAC|FLAP endonuclease 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KLFQHPSM 10
KLF HP +
Sbjct: 278 KLFTHPEV 285


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FKLFQHP 8
F LFQHP
Sbjct: 276 FVLFQHP 282




115|Sequence|571|580|QHPSMAIIKG

>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 QHPSMAIIKG 10
Q MAIIKG
Sbjct: 663 QEGDMAIIKG 672


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 1 QHPSMAIIKG 10
Q PS +IKG
Sbjct: 377 QSPSDTVIKG 386


>sp|NEP1_PYRAR|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum arsenaticum

Query: 1 QHPSMAII 8
HP+MA++
Sbjct: 44 HHPAMAVL 51


>sp|ARGC_METPE|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 QHPSMAIIKG 10
Q PS+A ++G
Sbjct: 264 QKPSIAAVRG 273


>sp|TRPD_METPE|ANTHRANILATE phosphoribosyltransferase|Methanosphaerula palustris (strain ATCC

Query: 2 HPSMAIIKG 10
H S AIIKG
Sbjct: 270 HTSAAIIKG 278




116|Sequence|576|585|AIIKGAGLVM

>sp|Y934_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0934|Methanocaldococcus jannaschii

Query: 2 IIKGAGLV 9
I KGAGL+
Sbjct: 11 IFKGAGLI 18


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 IIKGAGLVM 10
I+KG GL++
Sbjct: 170 IVKGEGLIL 178


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 2 IIKGAGLV 9
+I+GAG+V
Sbjct: 218 LIRGAGMV 225


>sp|SYP_PYRNV|PROLINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 AIIKGAGL 8
A +KGAGL
Sbjct: 318 AALKGAGL 325




117|Sequence|581|590|AGLVMKAIIE

>sp|RACD_THEK8|ASPARTATE racemase|Thermococcus sp. (strain KS-8)

Query: 2 GLVMKAIIE 10
GLVMKAI E
Sbjct: 155 GLVMKAIYE 163


>sp|PYRF_SACS2|OROTIDINE 5'-phosphate decarboxylase|Saccharolobus solfataricus (strain

Query: 2 GLVMKAIIE 10
G +MK+I+E
Sbjct: 66 GYIMKSIVE 74


>sp|HPPA_PYRAE|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Pyrobaculum aerophilum (strain

Query: 1 AGLVMKAII 9
AGL+M AI+
Sbjct: 623 AGLIMGAIV 631




118|Sequence|586|595|KAIIEEGDKE

>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 AIIEEGD 8
AIIEEGD
Sbjct: 488 AIIEEGD 494


>sp|PELO_METJA|PROTEIN pelota homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IIEEGDK 9
IIEEGDK
Sbjct: 29 IIEEGDK 35


>sp|GLNB2_METTL|NITROGEN fixation nifHD region GlnB-like|Methanothermococcus

Query: 3 IIEEGDKE 10
IIEEG+KE
Sbjct: 56 IIEEGEKE 63


>sp|HIS8_METLZ|HISTIDINOL-PHOSPHATE aminotransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KAIIEEGDK 9
+ I+E GDK
Sbjct: 99 RTIVEPGDK 107


>sp|RL7A_AERPE|LARGE ribosomal subunit protein eL8|Aeropyrum pernix (strain ATCC 700893

Query: 2 AIIEEGDKE 10
AIIE GD E
Sbjct: 100 AIIEPGDAE 108


>sp|RL7A_METJA|LARGE ribosomal subunit protein eL8|Methanocaldococcus jannaschii (strain

Query: 2 AIIEEGDKE 10
AII EGD E
Sbjct: 95 AIINEGDAE 103


>sp|Y1680_METJA|UNCHARACTERIZED protein MJ1680|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KAIIEEGDKE 10
KAII GDK+
Sbjct: 111 KAIIITGDKD 120


>sp|RL30E_METTP|LARGE ribosomal subunit protein eL30|Methanothrix thermoacetophila

Query: 2 AIIEEGDKE 10
A+IE GD E
Sbjct: 81 AVIEPGDSE 89


>sp|Y1771_AERPE|MEMO1 family protein APE_1771|Aeropyrum pernix (strain ATCC 700893

Query: 4 IEEGDKE 10
IEEGD E
Sbjct: 216 IEEGDPE 222


>sp|PELO_KORCO|PROTEIN pelota homolog|Korarchaeum cryptofilum (strain OPF8)

Query: 2 AIIEEGD 8
+IIEEGD
Sbjct: 28 SIIEEGD 34


>sp|CAS2_THEPD|CRISPR-ASSOCIATED endoribonuclease Cas2|Thermofilum pendens (strain DSM 2475

Query: 1 KAIIEEGDK 9
K I+EEGD
Sbjct: 52 KEIVEEGDS 60


>sp|Y1617_ARCFU|UNCHARACTERIZED protein AF_1617|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IIEEGDKE 10
I+ EGD+E
Sbjct: 16 IVSEGDRE 23




119|Sequence|591|600|EGDKEIATKM

>sp|PCNA_NANEQ|DNA polymerase sliding clamp|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EGDKEIAT 8
EGDKEI T
Sbjct: 62 EGDKEIIT 69


>sp|CH60_METBF|CHAPERONIN GroEL|Methanosarcina barkeri (strain Fusaro /

Query: 1 EGDKEIATKM 10
EGD+EI K+
Sbjct: 431 EGDREIGVKI 440


>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 EGDKEIATKM 10
+GDKE+A ++
Sbjct: 182 KGDKELAVRL 191


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 EGDKEIATKM 10
+GDKE+A ++
Sbjct: 182 KGDKELAVRL 191


>sp|TRM1_METM7|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 EGDKEIATKM 10
+GDKE+A ++
Sbjct: 182 KGDKELAVRL 191


>sp|NIKR_THESM|PUTATIVE nickel-responsive regulator|Thermococcus sibiricus (strain DSM

Query: 1 EGDKEIA 7
EGDKE+A
Sbjct: 49 EGDKEVA 55


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 2 GDKEIATKM 10
G +EIAT+M
Sbjct: 376 GPREIATEM 384


>sp|NIKR_THEON|PUTATIVE nickel-responsive regulator|Thermococcus onnurineus (strain NA1)

Query: 1 EGDKEIA 7
EGD+E+A
Sbjct: 49 EGDREVA 55


>sp|TRM1_METM6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 EGDKEIATKM 10
+GDKE+A ++
Sbjct: 182 KGDKELAVRL 191


>sp|TRM1_METM5|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 EGDKEIATKM 10
+GDKE+A ++
Sbjct: 182 KGDKELAVRL 191




120|Sequence|596|605|IATKMQELAL

>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain ATCC

Query: 1 IATKMQELAL 10
+ TKM E+AL
Sbjct: 302 VGTKMAEMAL 311


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IATKMQEL 8
IAT++QEL
Sbjct: 577 IATQLQEL 584


>sp|Y2201_ARCFU|UNCHARACTERIZED protein AF_2201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IATKMQELA 9
IA KM+E+A
Sbjct: 49 IAAKMEEMA 57




121|Sequence|601|610|QELALSEGAL

***** No hits found ******


122|Sequence|606|615|SEGALPRHLH

>sp|GCH3_PYRAE|GTP cyclohydrolase III|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SEGALPRHL 9
S GALP HL
Sbjct: 44 SIGALPHHL 52


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 2 EGALPRHLH 10
EG LP LH
Sbjct: 274 EGPLPTELH 282




123|Sequence|611|620|PRHLHTAMFT

>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PRHLHTAMF 9
P H+ AMF
Sbjct: 17 PNHIELAMF 25


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 1 PRHLHTAM 8
PRHL+T +
Sbjct: 154 PRHLYTYL 161


>sp|G3P_SULTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 HLHTAMFT 10
HLHT + T
Sbjct: 221 HLHTMVLT 228


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PRHLHTAMFT 10
P ++HT FT
Sbjct: 12 PDNVHTPFFT 21




124|Sequence|616|625|TAMFTISSDQ

***** No hits found ******


125|Sequence|621|630|ISSDQRMLTN

>sp|ADHS_HALSA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ISSDQRMLT 9
IS+D R+LT
Sbjct: 13 ISTDDRLLT 21




126|Sequence|626|635|RMLTNRQLSR

***** No hits found ******


127|Sequence|631|640|RQLSRHLVGL

>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 RQLSRHLVG 9
RQ+ RHL+G
Sbjct: 345 RQIPRHLIG 353


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 1 RQLSRHLVGL 10
R L HL+GL
Sbjct: 118 RHLLHHLIGL 127


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 2 QLSRHLVGL 10
LSR LVGL
Sbjct: 128 DLSRELVGL 136


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LSRHLVGL 10
L++HLVG+
Sbjct: 418 LAQHLVGM 425




128|Sequence|636|645|HLVGLWTADN

>sp|DADD_METST|5'-DEOXYADENOSINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 GLWTADN 10
G+WT DN
Sbjct: 248 GVWTTDN 254


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LVGLWTAD 9
L+GLW A+
Sbjct: 500 LIGLWIAE 507


>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 3 VGLWTAD 9
V +WTAD
Sbjct: 373 VAIWTAD 379


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 1 HLVGLWTADN 10
HL+GL+ D+
Sbjct: 123 HLIGLYGKDH 132


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 3 VGLWTADN 10
V WT DN
Sbjct: 193 VSAWTGDN 200


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 VGLWTADN 10
V WT DN
Sbjct: 194 VSAWTGDN 201


>sp|Y2214_ARCFU|UNCHARACTERIZED protein AF_2214|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LVGLWT 7
++GLWT
Sbjct: 88 IIGLWT 93


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 5 LWTADN 10
+WT DN
Sbjct: 412 IWTGDN 417


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 5 LWTADN 10
+WT DN
Sbjct: 412 IWTGDN 417


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 3 VGLWTADN 10
VGLW A N
Sbjct: 303 VGLWHAIN 310


>sp|SLAB_SACS2|S-LAYER protein B|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HLVGLW 6
H++G+W
Sbjct: 99 HVIGIW 104




129|Sequence|641|650|WTADNATATN

***** No hits found ******


130|Sequence|646|655|ATATNLLKRI

>sp|RLME_METM6|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 TATNLLKR 9
TAT +LKR
Sbjct: 146 TATKMLKR 153




131|Sequence|651|660|LLKRILPPGL

>sp|TRM14_METJA|TRNA (guanine(6)-N2)-methyltransferase|Methanocaldococcus jannaschii

Query: 1 LLKRILPPG 9
L+KR +PPG
Sbjct: 213 LMKRNIPPG 221


>sp|THIE_METMJ|THIAMINE-PHOSPHATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 KRILPPGL 10
+RI+PPG
Sbjct: 94 RRIVPPGF 101


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RILPPG 9
R+LPPG
Sbjct: 659 RVLPPG 664


>sp|PURP_SULAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LKRILPPGL 10
+K ++PPG+
Sbjct: 254 VKEVVPPGM 262


>sp|Y1254_METJA|UNCHARACTERIZED protein MJ1254|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKRILPPG 9
+K +LPPG
Sbjct: 177 IKIVLPPG 184


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLKRILPPG 9
+LKR++P G
Sbjct: 466 MLKRVVPKG 474


>sp|RS3_METTP|SMALL ribosomal subunit protein uS3|Methanothrix thermoacetophila (strain

Query: 4 RILPPG 9
RI+PPG
Sbjct: 181 RIVPPG 186


>sp|TRPD_METTM|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter marburgensis (strain

Query: 2 LKRILPP 8
+KR++PP
Sbjct: 252 IKRLMPP 258


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLKRILPPG 9
+LK+ILP G
Sbjct: 413 MLKKILPKG 421


>sp|KDPA_METB6|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Methanoregula boonei (strain DSM

Query: 3 KRILPPG 9
K+I+PPG
Sbjct: 528 KKIVPPG 534


>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LLKRILP 7
LLK+ILP
Sbjct: 38 LLKKILP 44


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 3 KRILPPG 9
K +LPPG
Sbjct: 68 KGVLPPG 74




132|Sequence|656|665|LPPGLLAYLE

>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium pump|Methanosarcina

Query: 1 LPPGLLAYL 9
+PPGLLA +
Sbjct: 569 IPPGLLAVI 577


>sp|PURP_CENSY|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Cenarchaeum symbiosum (strain A)

Query: 3 PGLLAYLE 10
PG+LAYL+
Sbjct: 183 PGVLAYLQ 190


>sp|Y896_ARCFU|UNCHARACTERIZED protein AF_0896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPPGLLAYL 9
+PP LL YL
Sbjct: 107 IPPTLLEYL 115


>sp|Y1361_METJA|UNCHARACTERIZED protein MJ1361|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGLLAYL 9
PG+LAYL
Sbjct: 60 PGVLAYL 66


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 1 LPPGLLAYL 9
+PPG+LA +
Sbjct: 569 IPPGILAVI 577


>sp|CBID_METAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 PPGLLAYLE 10
P GL AYLE
Sbjct: 76 PVGLRAYLE 84


>sp|LIPB1_PICTO|PROBABLE octanoyltransferase 1|Picrophilus torridus (strain ATCC 700027

Query: 1 LPPGLLAYLE 10
LPP ++ Y++
Sbjct: 175 LPPAVMDYID 184


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LPPGLLAYL 9
L PGLLA+L
Sbjct: 423 LFPGLLAFL 431


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PGLLAY 8
PG+LAY
Sbjct: 58 PGILAY 63


>sp|FENR2_SULAC|FERREDOXIN--NADP reductase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PGLLAY 8
PG+LAY
Sbjct: 58 PGILAY 63


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PGLLAY 8
PG+LAY
Sbjct: 53 PGILAY 58


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 1 LPPGLLAYLE 10
+PPG+LA L
Sbjct: 103 VPPGVLARLR 112


>sp|NFI_PICTO|BIFUNCTIONAL methyltransferase/endonuclease|Picrophilus torridus (strain ATCC

Query: 3 PGLLAYLE 10
PG LAY E
Sbjct: 172 PGYLAYRE 179


>sp|RIBL_METTP|FAD synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LPPGLLAYLE 10
L PG L YLE
Sbjct: 17 LHPGHLLYLE 26


>sp|NFI_HALSA|ENDONUCLEASE V|Halobacterium salinarum (strain ATCC 700922

Query: 3 PGLLAYLE 10
PGLLA+ E
Sbjct: 109 PGLLAFRE 116


>sp|NFI_NATPD|ENDONUCLEASE V|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PGLLAYLE 10
PGLLA+ E
Sbjct: 90 PGLLAFRE 97


>sp|NFI_AERPE|ENDONUCLEASE V|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGLLAYLE 10
PGLLA+ E
Sbjct: 82 PGLLAFRE 89


>sp|RIBL_METMS|FAD synthase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 LPPGLLAYLE 10
L PG L YLE
Sbjct: 13 LHPGHLYYLE 22


>sp|NFI_DESA1|ENDONUCLEASE V|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 PGLLAYLE 10
PGLLA+ E
Sbjct: 79 PGLLAFRE 86


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 4 GLLAYLE 10
GLL+YLE
Sbjct: 719 GLLSYLE 725


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LPPGLLAYL 9
+PPG+ YL
Sbjct: 473 VPPGVKGYL 481




133|Sequence|661|670|LAYLESSDLV

>sp|RNP3_PYRFU|RIBONUCLEASE P protein component 3|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LAYLESSDL 9
L Y+ESSDL
Sbjct: 81 LIYVESSDL 89


>sp|RNP3_PYRAB|RIBONUCLEASE P protein component 3|Pyrococcus abyssi (strain GE5 /

Query: 1 LAYLESSDL 9
L Y+ESSDL
Sbjct: 79 LIYVESSDL 87


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 LAYLESSDLV 10
L YLE DL+
Sbjct: 227 LRYLEERDLI 236


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 1 LAYLESSDLV 10
L+Y+E DLV
Sbjct: 80 LSYMEYPDLV 89


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LAYLESSDLV 10
L Y+ S DL+
Sbjct: 26 LTYISSGDLI 35


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LAYLESSDLV 10
L Y+ S DL+
Sbjct: 26 LTYISSGDLI 35


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LAYLESSDLV 10
L Y+ S DL+
Sbjct: 26 LVYISSGDLI 35


>sp|RNP3_PYRHO|RIBONUCLEASE P protein component 3|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LAYLESSDL 9
L Y+ES+DL
Sbjct: 78 LIYVESNDL 86


>sp|PSA1_HALVD|PROTEASOME subunit alpha 1|Haloferax volcanii (strain ATCC 29605

Query: 2 AYLESSDLV 10
+YLE++DL+
Sbjct: 234 SYLEANDLL 242


>sp|COFC_METJA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LAYLESSDLV 10
L YL+S DL+
Sbjct: 136 LLYLKSKDLI 145




134|Sequence|666|675|SSDLVPEKDA

>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 1 SSDLVPEKDA 10
+ D VPEKDA
Sbjct: 100 TVDFVPEKDA 109


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SSDLVPEKD 9
SS+LVPE+D
Sbjct: 439 SSNLVPERD 447


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SSDLVPEKD 9
S++LVPE+D
Sbjct: 439 STNLVPERD 447


>sp|HIS8_METBF|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SSDLVPEKD 9
S +L+PEKD
Sbjct: 174 SGNLLPEKD 182


>sp|Y621_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0621|Methanocaldococcus

Query: 4 LVPEKDA 10
++PEKDA
Sbjct: 152 IIPEKDA 158


>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SSDLVPEKD 9
+ DLVP KD
Sbjct: 47 NGDLVPGKD 55


>sp|PUR5_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 LVPEKDA 10
++PEKDA
Sbjct: 299 ILPEKDA 305


>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 1 SSDLVPE 7
SSD++PE
Sbjct: 10 SSDIIPE 16


>sp|DHQS_METB6|3-DEHYDROQUINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 SDLVPEKD 9
DLVP KD
Sbjct: 48 GDLVPGKD 55


>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LVPEKDA 10
++PEKDA
Sbjct: 299 ILPEKDA 305


>sp|PUR5_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LVPEKDA 10
++PEKDA
Sbjct: 299 ILPEKDA 305


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SDLVPEKD 9
+DLVP KD
Sbjct: 69 TDLVPGKD 76


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SSDLVPEKD 9
+ DL+PE D
Sbjct: 442 NKDLIPETD 450




135|Sequence|671|680|PEKDADRMHV

>sp|FOLD_METBF|BIFUNCTIONAL protein FolD|Methanosarcina barkeri (strain Fusaro /

Query: 1 PEKDADRMH 9
PEKDAD H
Sbjct: 121 PEKDADGFH 129


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PEKDADRMH 9
PEKDAD H
Sbjct: 109 PEKDADGFH 117


>sp|FOLD_METPE|BIFUNCTIONAL protein FolD|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PEKDADRMH 9
PEKD D H
Sbjct: 109 PEKDVDGFH 117


>sp|FOLD_METHJ|BIFUNCTIONAL protein FolD|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PEKDADRMH 9
PEKD D H
Sbjct: 109 PEKDVDGFH 117


>sp|FOLD_METMJ|BIFUNCTIONAL protein FolD|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PEKDADRMH 9
PEKD D H
Sbjct: 109 PEKDVDGFH 117


>sp|TRPF_PYRFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PEKDADRM 8
PE+DA+R+
Sbjct: 111 PEEDANRL 118


>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PEKDADR 7
PEKDA++
Sbjct: 301 PEKDAEK 307


>sp|FOLD_METAC|BIFUNCTIONAL protein FolD|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PEKDADRMH 9
P KDAD H
Sbjct: 124 PTKDADGFH 132


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PEKDADRMH 9
P KDAD H
Sbjct: 121 PAKDADGFH 129


>sp|FOLD_METBU|BIFUNCTIONAL protein FolD|Methanococcoides burtonii (strain DSM 6242

Query: 1 PEKDADRMH 9
P KDAD H
Sbjct: 120 PAKDADGFH 128


>sp|TRUB_THEAC|PROBABLE tRNA pseudouridine synthase B|Thermoplasma acidophilum (strain ATCC

Query: 1 PEKDADRM 8
PEK ADR+
Sbjct: 328 PEKTADRV 335


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 2 EKDADRMHV 10
E D DR+HV
Sbjct: 307 EIDLDRLHV 315


>sp|IF2G_HALWD|TRANSLATION initiation factor 2 subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PEKDAD 6
PE+DAD
Sbjct: 202 PERDAD 207


>sp|RL18A_NANEQ|LARGE ribosomal subunit protein eL20|Nanoarchaeum equitans (strain

Query: 1 PEKDADRM 8
PEKD D++
Sbjct: 62 PEKDKDKL 69


>sp|TRPF_META3|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PEKDADRM 8
PEKDA+ +
Sbjct: 111 PEKDAENL 118


>sp|FOLD_NATPD|BIFUNCTIONAL protein FolD|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PEKDADRMH 9
P+KD D H
Sbjct: 114 PQKDVDGFH 122


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 EKDADRMHV 10
+K A+RMHV
Sbjct: 369 KKIAERMHV 377




136|Sequence|676|685|DRMHVRDNVK

>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DRMHVRD 7
D++HVRD
Sbjct: 274 DKLHVRD 280


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DRMHVRD 7
D++HVRD
Sbjct: 274 DKLHVRD 280


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DRMHVRDNV 9
D MHV +NV
Sbjct: 237 DAMHVLENV 245




137|Sequence|681|690|RDNVKIAMDQ

>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RDNVKIAMD 9
RDN+K AM+
Sbjct: 504 RDNLKFAME 512


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 1 RDNVKIAMDQ 10
R+N+K MDQ
Sbjct: 459 RNNLKRIMDQ 468


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 DNVKIAMDQ 10
D VK+A+D
Sbjct: 236 DKVKVALDH 244


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 2 DNVKIAMD 9
DN+K+ MD
Sbjct: 418 DNLKVTMD 425


>sp|RL1_METMJ|LARGE ribosomal subunit protein uL1|Methanoculleus marisnigri (strain

Query: 2 DNVKIAM 8
DNVKIA+
Sbjct: 56 DNVKIAV 62




138|Sequence|686|695|IAMDQYGKFN

>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IAMDQYGKF 9
IA+D YG+F
Sbjct: 345 IAVDGYGEF 353


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 2 AMDQYGK 8
A+DQYG+
Sbjct: 255 ALDQYGR 261


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 2 AMDQYGK 8
A+DQYG+
Sbjct: 255 ALDQYGR 261


>sp|MSRA_METMJ|PEPTIDE methionine sulfoxide reductase MsrA|Methanoculleus marisnigri

Query: 3 MDQYGKF 9
MDQ GKF
Sbjct: 121 MDQSGKF 127


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 IAMDQYGKFN 10
IA + YGK N
Sbjct: 33 IAYETYGKLN 42


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 IAMDQYGKFN 10
IA+D + KFN
Sbjct: 390 IALDGFRKFN 399


>sp|RNZ_METVS|RIBONUCLEASE Z|Methanococcus vannielii (strain ATCC 35089

Query: 1 IAMDQYGKF 9
I +D++GKF
Sbjct: 218 IPIDEFGKF 226


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 1 IAMDQYGKF 9
+A+D++G F
Sbjct: 150 VALDEFGHF 158


>sp|METXA_METVS|HOMOSERINE O-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IAMDQYGKFN 10
IA + YGK N
Sbjct: 33 IAYETYGKLN 42


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IAMDQYGKFN 10
IA + YGK N
Sbjct: 34 IAYETYGKLN 43


>sp|GUAAA_METTP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothrix

Query: 1 IAMDQYGKFN 10
+ ++ YG+FN
Sbjct: 4 LVVNNYGQFN 13


>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 YGKFN 10
YGKFN
Sbjct: 263 YGKFN 267




139|Sequence|691|700|YGKFNKVPEW

>sp|LIPB1_PICTO|PROBABLE octanoyltransferase 1|Picrophilus torridus (strain ATCC 700027

Query: 1 YGKFNKV 7
YGKFNK+
Sbjct: 202 YGKFNKI 208


>sp|Y018_METJA|UNCHARACTERIZED protein MJ0018|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KFNKVPEW 10
K N +P+W
Sbjct: 446 KINSLPDW 453


>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 4 FNKVPEW 10
F K+P+W
Sbjct: 316 FTKLPKW 322


>sp|RL44E_HALMA|LARGE ribosomal subunit protein eL42|Haloarcula marismortui (strain

Query: 2 GKFNKVP 8
GKF+KVP
Sbjct: 50 GKFSKVP 56


>sp|AATF_METBU|A-TYPE ATP synthase subunit F|Methanococcoides burtonii (strain DSM 6242

Query: 4 FNKVPE 9
FNK+PE
Sbjct: 54 FNKLPE 59


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 1 YGKFNKVPE 9
+ + NKVPE
Sbjct: 438 HAELNKVPE 446


>sp|RL44E_HALSA|LARGE ribosomal subunit protein eL42|Halobacterium salinarum (strain

Query: 1 YGKFNKVP 8
+G+F+KVP
Sbjct: 50 HGRFSKVP 57


>sp|RL44E_ARCFU|LARGE ribosomal subunit protein eL42|Archaeoglobus fulgidus (strain

Query: 2 GKFNKVP 8
GKF+KVP
Sbjct: 50 GKFSKVP 56


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GKFNKVP 8
G+F+KVP
Sbjct: 555 GEFSKVP 561


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 NKVPEW 10
NK PEW
Sbjct: 202 NKRPEW 207


>sp|RL37_SULAC|LARGE ribosomal subunit protein eL37|Sulfolobus acidocaldarius (strain

Query: 1 YGKFNKVP 8
+GK NK P
Sbjct: 7 FGKMNKTP 14


>sp|Y642_METJA|UNCHARACTERIZED protein MJ0642|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGKFNKVPEW 10
YGK + +P W
Sbjct: 211 YGKSHYIPNW 220


>sp|HJE_SACS2|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus solfataricus

Query: 3 KFNKVPEW 10
KF +V EW
Sbjct: 89 KFKQVHEW 96


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YGKFNKVP 8
Y +F KVP
Sbjct: 68 YDRFRKVP 75


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 YGKFNKVP 8
Y +F KVP
Sbjct: 68 YDRFRKVP 75


>sp|RL44E_NATPD|LARGE ribosomal subunit protein eL42|Natronomonas pharaonis (strain

Query: 2 GKFNKVP 8
G+F+KVP
Sbjct: 51 GRFSKVP 57


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YGKFNKVP 8
Y +F KVP
Sbjct: 68 YDRFRKVP 75




140|Sequence|696|705|KVPEWQRLAG

>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KVPEWQR 7
+VPEW R
Sbjct: 17 RVPEWSR 23


>sp|COBD_THEKO|PROBABLE cobalamin biosynthesis protein CobD|Thermococcus kodakarensis

Query: 1 KVPEWQRLA 9
KVPE+ RLA
Sbjct: 215 KVPEYYRLA 223


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KVPEWQR 7
KVPEW +
Sbjct: 17 KVPEWAK 23


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KVPEWQR 7
KVPEW +
Sbjct: 17 KVPEWAK 23


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KVPEWQR 7
KVPEW +
Sbjct: 17 KVPEWAK 23


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KVPEWQR 7
KVPEW +
Sbjct: 17 KVPEWAK 23


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KVPEWQR 7
KVPEW +
Sbjct: 17 KVPEWAK 23


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KVPEWQR 7
KVPEW +
Sbjct: 17 KVPEWAK 23


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KVPEWQR 7
KVPEW +
Sbjct: 17 KVPEWAK 23


>sp|CAPPA_SULAC|PHOSPHOENOLPYRUVATE carboxylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KVPEWQR 7
KVPEW +
Sbjct: 17 KVPEWNQ 23


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 3 PEWQRLAG 10
P WQRL G
Sbjct: 901 PSWQRLRG 908


>sp|CBIX_SACS2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KVPEWQ 6
K+PEW+
Sbjct: 12 KIPEWK 17


>sp|CBIX_SACI7|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KVPEWQ 6
K+PEW+
Sbjct: 12 KIPEWK 17


>sp|CBIX_SACI6|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KVPEWQ 6
K+PEW+
Sbjct: 12 KIPEWK 17


>sp|CBIX_SACI4|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KVPEWQ 6
K+PEW+
Sbjct: 12 KIPEWK 17


>sp|CBIX_SACI3|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.16.27)

Query: 1 KVPEWQ 6
K+PEW+
Sbjct: 12 KIPEWK 17


>sp|CBIX_SACI2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KVPEWQ 6
K+PEW+
Sbjct: 12 KIPEWK 17


>sp|CBIX_SACI1|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KVPEWQ 6
K+PEW+
Sbjct: 12 KIPEWK 17


>sp|Y297_METJA|UNCHARACTERIZED protein MJ0297|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVPEW 5
KVPEW
Sbjct: 134 KVPEW 138


>sp|RL10_HALSA|LARGE ribosomal subunit protein uL10|Halobacterium salinarum (strain

Query: 1 KVPEWQR 7
+VPEW+R
Sbjct: 11 EVPEWKR 17


>sp|RL10_HALS3|LARGE ribosomal subunit protein uL10|Halobacterium salinarum (strain

Query: 1 KVPEWQR 7
+VPEW+R
Sbjct: 11 EVPEWKR 17


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVPEWQRLA 9
K+PEW + A
Sbjct: 346 KIPEWIKKA 354


>sp|RL10_METBF|LARGE ribosomal subunit protein uL10|Methanosarcina barkeri (strain

Query: 2 VPEWQR 7
VPEW++
Sbjct: 11 VPEWKK 16


>sp|Y1616_ARCFU|UNCHARACTERIZED protein AF_1616|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VPEWQR 7
+PEW R
Sbjct: 59 IPEWMR 64


>sp|Y556_ARCFU|PUTATIVE sulfur carrier protein AF_0556|Archaeoglobus fulgidus (strain

Query: 2 VPEWQRLAG 10
+PEW + AG
Sbjct: 44 IPEWVKKAG 52


>sp|RPO3_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VPEWQRL 8
+PEW+ L
Sbjct: 167 IPEWKEL 173


>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PEWQR 7
PEWQ+
Sbjct: 323 PEWQK 327


>sp|GCSH_HALMA|PROBABLE glycine cleavage system H|Haloarcula marismortui (strain ATCC

Query: 4 EWQRLAG 10
EW R+AG
Sbjct: 16 EWVRVAG 22


>sp|HIS4_METLZ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocorpusculum labreanum

Query: 2 VPEWQRLAG 10
V WQ LAG
Sbjct: 137 VSGWQELAG 145


>sp|HMEA_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 PEWQRLA 9
P+W R+A
Sbjct: 92 PQWMRIA 98


>sp|RPO3_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermococcus kodakarensis (strain ATCC

Query: 2 VPEWQRL 8
VP+W+ L
Sbjct: 165 VPDWEEL 171


>sp|Y776_METJA|UNCHARACTERIZED protein MJ0776|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVPEWQRLAG 10
K+P W + G
Sbjct: 106 KIPGWDNVIG 115


>sp|RL31_METHJ|LARGE ribosomal subunit protein eL31|Methanospirillum hungatei JF-1

Query: 1 KVPEWQRLA 9
+VP W+R A
Sbjct: 19 RVPRWRRSA 27


>sp|RL2_CALMQ|LARGE ribosomal subunit protein uL2|Caldivirga maquilingensis (strain

Query: 1 KVPEWQRLA 9
+ P W+R+A
Sbjct: 18 RSPSWRRIA 26


>sp|RL31_METAC|LARGE ribosomal subunit protein eL31|Methanosarcina acetivorans (strain

Query: 1 KVPEWQR 7
KVP W+R
Sbjct: 20 KVPAWKR 26




141|Sequence|701|710|QRLAGKAAKE

>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QRLAGKAAKE 10
+R+AGK+ +E
Sbjct: 396 ERIAGKSVRE 405


>sp|PANB_HYPBU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 RLAGKAAKE 10
RLAGK A E
Sbjct: 155 RLAGKTASE 163


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 1 QRLAGKAAK 9
+RL GK AK
Sbjct: 48 ERLVGKPAK 56


>sp|Y033_METJA|UNCHARACTERIZED FAD-dependent oxidoreductase MJ0033|Methanocaldococcus jannaschii

Query: 3 LAGKAAKE 10
+AGK+AKE
Sbjct: 383 IAGKSAKE 390


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QRLAGKAAK 9
+RLAG+AAK
Sbjct: 80 ERLAGRAAK 88


>sp|KCY_METBF|CYTIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RLAGKAAKE 10
RLAG AKE
Sbjct: 82 RLAGHMAKE 90




142|Sequence|706|715|KAAKEVEKFA

>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 1 KAAKEVEKF 9
KAAKE+EK
Sbjct: 238 KAAKEIEKI 246


>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KAAKEVEKF 9
KA KE+EKF
Sbjct: 355 KAKKEIEKF 363


>sp|MVHB_METTH|POLYFERREDOXIN protein MvhB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KAAKEVEKF 9
K AKE++KF
Sbjct: 201 KRAKEIKKF 209


>sp|TRM14_ARCFU|TRNA (guanine(6)-N2)-methyltransferase|Archaeoglobus fulgidus (strain

Query: 2 AAKEVEKFA 10
AAKEVE F
Sbjct: 45 AAKEVESFG 53


>sp|MVHB_METTM|POLYFERREDOXIN protein MvhB|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 KAAKEVEKF 9
K AKE+ KF
Sbjct: 201 KRAKEIRKF 209


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KAAKEVEKFA 10
KAA++ EKFA
Sbjct: 157 KAAEKTEKFA 166


>sp|HEM3_METTH|PROBABLE porphobilinogen deaminase|Methanothermobacter thermautotrophicus

Query: 1 KAAKEVEKF 9
KAAKE+E +
Sbjct: 280 KAAKEMEDY 288




143|Sequence|711|720|VEKFAKEKVD

>sp|PYRB_PYRCJ|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum calidifontis

Query: 1 VEKFAKEKVD 10
+EKFAK +VD
Sbjct: 28 MEKFAKSRVD 37


>sp|Y1068_METJA|UNCHARACTERIZED membrane protein MJ1068|Methanocaldococcus jannaschii (strain ATCC

Query: 3 KFAKEKV 9
KFAKEKV
Sbjct: 219 KFAKEKV 225


>sp|PYRB_PYRAR|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum arsenaticum

Query: 1 VEKFAKEKVD 10
+EK+AK +VD
Sbjct: 28 MEKYAKSRVD 37


>sp|RTCA_METBF|RNA 3'-terminal phosphate cyclase|Methanosarcina barkeri (strain Fusaro

Query: 4 FAKEKVD 10
FAKEKV+
Sbjct: 108 FAKEKVE 114


>sp|RSMA_METHJ|PROBABLE ribosomal RNA small subunit|Methanospirillum hungatei JF-1 (strain

Query: 4 FAKEKVD 10
F KEK+D
Sbjct: 218 FGKEKID 224


>sp|UPPP_META3|UNDECAPRENYL-DIPHOSPHATASE aeolicus (strain ATCC BAA-1280

Query: 1 VEKFAKEK 8
VEK+ KEK
Sbjct: 116 VEKYYKEK 123


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VEKFAKEKVD 10
VEK AK+ VD
Sbjct: 146 VEKQAKQGVD 155


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VEKFAKEKVD 10
VEK AK+ VD
Sbjct: 146 VEKQAKQGVD 155


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEKFAKEKVD 10
+EK AKE VD
Sbjct: 148 IEKQAKEGVD 157


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEKFAKEKVD 10
+E+F KE+++
Sbjct: 535 IERFVKEQIN 544


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VEKFAKEKVD 10
VEK AK+ VD
Sbjct: 145 VEKHAKDGVD 154


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EKFAKEK 8
EKF KEK
Sbjct: 29 EKFEKEK 35




144|Sequence|716|725|KEKVDLVLMH

>sp|RS24_IGNH4|SMALL ribosomal subunit protein eS24|Ignicoccus hospitalis (strain

Query: 1 KEKVDLVLMH 10
+E++DLVL+H
Sbjct: 19 REELDLVLVH 28


>sp|HEM2_METTH|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermobacter thermautotrophicus (strain

Query: 1 KEKVDLVLM 9
KE+ DLV+M
Sbjct: 113 KEETDLVVM 121


>sp|GLYA_PYRCJ|SERINE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 KEKVDLVLMH 10
KE +D+VL H
Sbjct: 7 KEVLDVVLRH 16


>sp|WECBH_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase homolog|Methanococcus maripaludis (strain DSM 14266

Query: 1 KEKVDLVLMH 10
KEK DLVL++
Sbjct: 83 KEKPDLVLVY 92


>sp|PGK_PYRWO|PHOSPHOGLYCERATE kinase|Pyrococcus woesei

Query: 1 KEKVDLVL 8
KEK DL+L
Sbjct: 214 KEKADLIL 221


>sp|PGK_PYRFU|PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KEKVDLVL 8
KEK DL+L
Sbjct: 214 KEKADLIL 221




145|Sequence|721|730|LVLMHWRDRM

>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LMHWRDRM 10
L+HW D M
Sbjct: 153 LLHWPDSM 160


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 3 LMHWRDRM 10
L+HW D M
Sbjct: 153 LLHWPDSM 160


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 3 LMHWRDRM 10
L+HW D M
Sbjct: 149 LLHWPDSM 156


>sp|PPS_THEON|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus onnurineus (strain NA1)

Query: 2 VLMHWRDRM 10
VL+H RDR+
Sbjct: 238 VLLHIRDRL 246


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 3 LMHWRDRM 10
L+HW D M
Sbjct: 150 LLHWPDSM 157


>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VLMHWRDRM 10
VL+H RDR+
Sbjct: 238 VLLHIRDRL 246


>sp|Y732_METJA|UNCHARACTERIZED protein MJ0732|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LMHWRDRM 10
++HW D M
Sbjct: 144 MLHWPDNM 151


>sp|TYW3_METJA|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 VLMHWRDRM 10
+LM W +R+
Sbjct: 180 ILMRWANRL 188




146|Sequence|726|735|WRDRMGIAQK

>sp|Y1017_METAC|UPF0251 protein MA_1017|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DRMGIAQK 10
DRMGI++K
Sbjct: 56 DRMGISRK 63


>sp|Y2090_METMA|UPF0251 protein MM_2090|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DRMGIAQK 10
DRMGI++K
Sbjct: 56 DRMGISRK 63


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WRDRMG 6
W DRMG
Sbjct: 87 WYDRMG 92


>sp|XPB_ARCFU|DNA 3'-5' translocase XPB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WRDRMGI 7
W++R+GI
Sbjct: 129 WKERLGI 135


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WRDRMGI 7
W++R GI
Sbjct: 1492 WKERFGI 1498


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WRDRMGIA 8
W+D+ G+A
Sbjct: 156 WQDKKGVA 163




147|Sequence|731|740|GIAQKENINQ

>sp|Y1287_METJA|UNCHARACTERIZED protein MJ1287|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIAQKENINQ 10
GI++KE IN+
Sbjct: 226 GISEKEIINE 235


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 2|Methanocaldococcus

Query: 2 IAQKENINQ 10
I +KENIN+
Sbjct: 185 INKKENINK 193


>sp|RFCS_METB6|REPLICATION factor C small subunit|Methanoregula boonei (strain DSM 21154

Query: 1 GIAQKENINQ 10
GIA E INQ
Sbjct: 259 GIAPNELINQ 268


>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 1 GIAQKENIN 9
G+A+K++IN
Sbjct: 144 GLAKKDSIN 152


>sp|RFCS_METMJ|REPLICATION factor C small subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GIAQKENINQ 10
GIA E INQ
Sbjct: 259 GIAPNELINQ 268


>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 GIAQKENINQ 10
G+A +ENI++
Sbjct: 336 GVAIRENIHE 345


>sp|RFCS_METMP|REPLICATION factor C small subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 IAQKENIN 9
I++KEN+N
Sbjct: 171 ISEKENLN 178




148|Sequence|736|745|ENINQKPVVL

>sp|DCDB_METHJ|DCTP deaminase, dUMP-forming|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NINQKPV 8
N+NQ+PV
Sbjct: 130 NVNQRPV 136


>sp|DCDB_METPE|DCTP deaminase, dUMP-forming|Methanosphaerula palustris (strain ATCC

Query: 2 NINQKPV 8
N+NQ+PV
Sbjct: 130 NVNQRPV 136


>sp|Y1363_THEAC|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma

Query: 1 ENINQKPVV 9
ENIN PV+
Sbjct: 281 ENINGCPVI 289


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 INQKPVVL 10
IN KPV+L
Sbjct: 430 INNKPVIL 437


>sp|FTSY_THEAC|SIGNAL recognition particle receptor FtsY|Thermoplasma acidophilum

Query: 2 NINQKPVVL 10
N+N+KP V+
Sbjct: 81 NVNKKPFVV 89


>sp|MTRA_METV3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus voltae (strain ATCC

Query: 1 ENINQKPVV 9
EN+ Q+PV
Sbjct: 116 ENVGQEPVA 124


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM

Query: 4 NQKPVVL 10
NQKP++L
Sbjct: 38 NQKPILL 44


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 NINQKPVVL 10
+++QKPV+L
Sbjct: 208 DLSQKPVML 216


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ENINQKPVVL 10
EN+N+K V++
Sbjct: 181 ENVNEKIVLI 190




149|Sequence|741|750|KPVVLRKRRQ

>sp|LYSK_SULAC|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KPVVLRKR 8
KP +LRKR
Sbjct: 282 KPTILRKR 289




150|Sequence|746|755|RKRRQRIKIE

>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RKRRQRIKI 9
R+RR+R+KI
Sbjct: 354 RERRERVKI 362




151|Sequence|751|760|RIKIEANWDL

>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IKIEANWD 9
+ IEANW+
Sbjct: 183 VTIEANWN 190


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 1 RIKIEANW 8
RIK+++NW
Sbjct: 242 RIKLDSNW 249


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 RIKIEANWDL 10
R K+E WD+
Sbjct: 433 RSKLEKEWDV 442


>sp|Y2077_ARCFU|UNCHARACTERIZED protein AF_2077|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IKIEANWD 9
I IEA WD
Sbjct: 115 IDIEAFWD 122


>sp|IF2A_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 RIKIEANWDL 10
R+KIEA DL
Sbjct: 177 RVKIEAYVDL 186


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 4 IEANWD 9
IEA WD
Sbjct: 74 IEATWD 79


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 4 IEANWD 9
+EA+WD
Sbjct: 73 VEASWD 78


>sp|UDP_THEKO|URIDINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IKIEANWD 9
+KI A WD
Sbjct: 253 VKILAEWD 260


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii

Query: 3 KIEANWD 9
++E NWD
Sbjct: 23 EVETNWD 29


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 RIKIEANWDL 10
RI+ +WDL
Sbjct: 298 RIRKSGSWDL 307




152|Sequence|756|765|ANWDLFYYRF

>sp|G1PDH_META3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus aeolicus (strain ATCC

Query: 1 ANWDLFYY 8
+N+D FYY
Sbjct: 43 SNFDYFYY 50


>sp|CP119_SULAC|CYTOCHROME P450 119|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 WDLFYYRF 10
W +F YR+
Sbjct: 21 WQVFSYRY 28


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 WDLFYYRF 10
WDL Y F
Sbjct: 303 WDLLSYTF 310


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 WDLFYYRF 10
WDL Y F
Sbjct: 23 WDLSMYHF 30


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ANWDLFYYR 9
A W+ F YR
Sbjct: 165 AEWERFEYR 173




153|Sequence|761|770|FYYRFGQDHA

>sp|FWDC_METTH|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 YYRFGQDHA 10
YY+F DHA
Sbjct: 242 YYKFEGDHA 250


>sp|CPGS_METST|CYCLIC 2,3-diphosphoglycerate synthetase|Methanosphaera stadtmanae

Query: 5 FGQDHA 10
FGQDH+
Sbjct: 66 FGQDHS 71


>sp|FWDC_METWO|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 YYRFGQDHA 10
+Y+F DHA
Sbjct: 242 FYKFEGDHA 250


>sp|FWDC_METTM|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 YYRFGQDHA 10
+Y+F DHA
Sbjct: 242 FYKFEGDHA 250


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YYRFGQDHA 10
++ FG+DHA
Sbjct: 315 HHMFGRDHA 323


>sp|IORB_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorB|Thermococcus kodakarensis (strain

Query: 2 YYRFGQD 8
Y RFG+D
Sbjct: 52 YVRFGED 58


>sp|IORB_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus abyssi (strain GE5 /

Query: 2 YYRFGQD 8
Y RFG+D
Sbjct: 52 YVRFGED 58


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 FGQDHA 10
FG+DHA
Sbjct: 234 FGKDHA 239


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 FGQDHA 10
FG+DHA
Sbjct: 230 FGKDHA 235


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 5 FGQDHA 10
FG+DHA
Sbjct: 234 FGKDHA 239


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 FGQDHA 10
FG+DHA
Sbjct: 234 FGKDHA 239


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 YYRFGQDHA 10
Y FG+DHA
Sbjct: 266 YEPFGKDHA 274


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 YRFGQDHA 10
Y FG+ HA
Sbjct: 173 YEFGKQHA 180


>sp|HMGCS_METS3|HYDROXYMETHYLGLUTARYL-COA synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 FYYRFGQDH 9
FY R GQD+
Sbjct: 185 FYRREGQDY 193


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FYYRFGQ 7
FY +FGQ
Sbjct: 231 FYRKFGQ 237


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 1 FYYRFGQD 8
FY FG+D
Sbjct: 31 FYESFGED 38


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain

Query: 1 FYYRFGQD 8
FY FG+D
Sbjct: 30 FYESFGED 37


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain

Query: 1 FYYRFGQD 8
FY FG+D
Sbjct: 31 FYESFGED 38


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 1 FYYRFGQD 8
FY FG+D
Sbjct: 31 FYESFGED 38


>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FYYRFGQDH 9
+Y R G++H
Sbjct: 102 YYCRIGEEH 110


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 1 FYYRFGQDH 9
+Y R G++H
Sbjct: 102 YYCRIGEEH 110


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FYYRFGQDH 9
+Y R G++H
Sbjct: 102 YYCRIGEEH 110


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FGQDHA 10
FG+DHA
Sbjct: 228 FGKDHA 233


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 3 YRFGQD 8
YRFG+D
Sbjct: 133 YRFGRD 138


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila

Query: 1 FYYRFGQD 8
FY FG+D
Sbjct: 31 FYETFGED 38


>sp|Y1530_METJA|UNCHARACTERIZED N-acetyltransferase MJ1530|Methanocaldococcus jannaschii (strain

Query: 1 FYYRFG 6
FYYR G
Sbjct: 115 FYYRMG 120


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 FGQDHA 10
FG+DHA
Sbjct: 267 FGKDHA 272


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 FGQDHA 10
FG+DHA
Sbjct: 268 FGKDHA 273


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 FGQDHA 10
FG+DHA
Sbjct: 251 FGKDHA 256


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 FGQDHA 10
FG+DHA
Sbjct: 233 FGKDHA 238


>sp|MRE11_ARCFU|DNA double-strand break repair protein|Archaeoglobus fulgidus (strain

Query: 2 YYRFGQDH 9
YY FG H
Sbjct: 196 YYAFGHIH 203




154|Sequence|766|775|GQDHARSNLI

>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 1 GQDHARSNLI 10
G+D+ R NLI
Sbjct: 298 GEDNVRENLI 307


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DHARSNLI 10
+HAR NLI
Sbjct: 703 EHARDNLI 710


>sp|RPO11_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus shibatae (strain ATCC

Query: 1 GQDHARSNLI 10
G+DH NLI
Sbjct: 19 GEDHTLGNLI 28


>sp|RPO11_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 1 GQDHARSNLI 10
G+DH NLI
Sbjct: 19 GEDHTLGNLI 28


>sp|RPO11_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 1 GQDHARSNLI 10
G+DH NLI
Sbjct: 19 GEDHTLGNLI 28


>sp|RPO11_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 1 GQDHARSNLI 10
G+DH NLI
Sbjct: 19 GEDHTLGNLI 28


>sp|RPO11_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 1 GQDHARSNLI 10
G+DH NLI
Sbjct: 19 GEDHTLGNLI 28


>sp|RPO11_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 1 GQDHARSNLI 10
G+DH NLI
Sbjct: 19 GEDHTLGNLI 28


>sp|RPO11_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 1 GQDHARSNLI 10
G+DH NLI
Sbjct: 19 GEDHTLGNLI 28


>sp|RPO11_METS5|DNA-DIRECTED RNA polymerase subunit Rpo11|Metallosphaera sedula (strain ATCC

Query: 1 GQDHARSNLI 10
G+DH NLI
Sbjct: 19 GEDHTLGNLI 28


>sp|RPO11_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus solfataricus (strain

Query: 1 GQDHARSNLI 10
G+DH NLI
Sbjct: 19 GEDHTLGNLI 28


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 2 QDHARSNLI 10
++HARS+L+
Sbjct: 256 EEHARSDLV 264


>sp|RPO11_THESM|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus sibiricus (strain DSM

Query: 1 GQDHARSNLI 10
G+DH +NL+
Sbjct: 19 GEDHTFANLL 28


>sp|RPO11_THEON|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus onnurineus (strain NA1)

Query: 1 GQDHARSNLI 10
G+DH +NL+
Sbjct: 19 GEDHTFANLL 28


>sp|RPO11_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus kodakarensis (strain

Query: 1 GQDHARSNLI 10
G+DH +NL+
Sbjct: 19 GEDHTFANLL 28


>sp|RPO11_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus horikoshii (strain ATCC

Query: 1 GQDHARSNLI 10
G+DH +NL+
Sbjct: 19 GEDHTFANLL 28


>sp|RPO11_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus furiosus (strain ATCC

Query: 1 GQDHARSNLI 10
G+DH +NL+
Sbjct: 19 GEDHTFANLL 28


>sp|RPO11_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus abyssi (strain GE5 /

Query: 1 GQDHARSNLI 10
G+DH +NL+
Sbjct: 19 GEDHTFANLL 28


>sp|RPO11_METM7|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain C7

Query: 3 DHARSNLI 10
DH+ SNLI
Sbjct: 22 DHSLSNLI 29


>sp|RPO11_METM5|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain C5

Query: 3 DHARSNLI 10
DH+ SNLI
Sbjct: 22 DHSLSNLI 29


>sp|RPO11_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus gammatolerans (strain

Query: 1 GQDHARSNLI 10
G+DH +NL+
Sbjct: 19 GEDHTFANLL 28


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 GQDHARSNL 9
G+D+ R+NL
Sbjct: 299 GEDNVRANL 307


>sp|RPO11_METM6|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain C6

Query: 3 DHARSNLI 10
DH+ SNLI
Sbjct: 22 DHSLSNLI 29


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GQDHARSNL 9
G +HA++NL
Sbjct: 308 GLEHAKNNL 316


>sp|RPO11_METKA|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanopyrus kandleri (strain AV19 /

Query: 1 GQDHARSNLI 10
G+DH NL+
Sbjct: 24 GEDHTLCNLL 33


>sp|RTCA_METJA|RNA 3'-terminal phosphate cyclase|Methanocaldococcus jannaschii (strain

Query: 3 DHARSNLI 10
+H++SNL+
Sbjct: 182 EHSKSNLV 189


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GQDHARSNL 9
G +HA++NL
Sbjct: 308 GIEHAKNNL 316


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 2 QDHARSNL 9
+DHARS +
Sbjct: 574 EDHARSRM 581


>sp|RPO11_METMP|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain

Query: 3 DHARSNLI 10
DH+ SNL+
Sbjct: 22 DHSLSNLV 29


>sp|PYRE_AERPE|OROTATE phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GQDHARSNLI 10
GQD ARS+ +
Sbjct: 61 GQDLARSSAV 70


>sp|FAU1_HALSA|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GQDHARS 7
G DHAR+
Sbjct: 65 GDDHARA 71


>sp|FAU1_HALS3|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 29341

Query: 1 GQDHARS 7
G DHAR+
Sbjct: 65 GDDHARA 71




155|Sequence|771|780|RSNLIWNFKT

>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NLIWNFK 9
N++WN K
Sbjct: 242 NIVWNLK 248


>sp|Y1432_METJA|UNCHARACTERIZED protein MJ1432|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 IWNFK 9
IWNFK
Sbjct: 157 IWNFK 161


>sp|PSB_METPS|PROTEASOME subunit beta|Methanocella paludicola (strain DSM 17711

Query: 2 SNLIWNFK 9
SNL+W ++
Sbjct: 92 SNLLWEYR 99


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 3 NLIWNF 8
NL+W+F
Sbjct: 58 NLVWSF 63


>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 5 IWNFKT 10
IWN KT
Sbjct: 108 IWNIKT 113


>sp|AATC_METMA|A-TYPE ATP synthase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 IWNFKT 10
IWN KT
Sbjct: 119 IWNIKT 124


>sp|AATC_METBF|A-TYPE ATP synthase subunit C|Methanosarcina barkeri (strain Fusaro /

Query: 5 IWNFKT 10
IWN KT
Sbjct: 119 IWNIKT 124


>sp|Y3522_METJA|UNCHARACTERIZED protein MJECL22|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 IWNFKT 10
IW FKT
Sbjct: 34 IWEFKT 39




156|Sequence|776|785|WNFKTREELK

>sp|NITR_PYRAB|NITRILASE abyssi (strain GE5 /

Query: 1 WNFKTREEL 9
+NF+TREE+
Sbjct: 48 YNFETREEV 56


>sp|PANB_PYRAB|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 WNFKTREELK 10
W F+ +EE K
Sbjct: 262 WEFQDKEEFK 271


>sp|PANB_PYRHO|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WNFKTREELK 10
W F+ +EE K
Sbjct: 262 WEFQDKEEFK 271


>sp|PURO_METTH|IMP cyclohydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 WNFKTRE 7
WN TRE
Sbjct: 195 WNLATRE 201


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 WNFKTREEL 9
+N KTRE+L
Sbjct: 793 YNVKTREDL 801


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 4 KTREELK 10
KT+EELK
Sbjct: 183 KTKEELK 189


>sp|Y1800_ARCFU|PUTATIVE transport protein AF_1800|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WNFKTREEL 9
+N+ T+EEL
Sbjct: 322 YNYYTKEEL 330


>sp|DEOC_METTH|DEOXYRIBOSE-PHOSPHATE aldolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 NFKTREEL 9
N +TREEL
Sbjct: 5 NVETREEL 12


>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 WNFKTREEL 9
WN K EEL
Sbjct: 187 WNMKLVEEL 195


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 WNFKTREE 8
W +T+EE
Sbjct: 452 WRLRTKEE 459


>sp|HEM1_SACI7|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 WNFKTREE 8
NFK REE
Sbjct: 290 LNFKAREE 297


>sp|HEM1_SACI6|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 WNFKTREE 8
NFK REE
Sbjct: 290 LNFKAREE 297


>sp|HEM1_SACI4|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 WNFKTREE 8
NFK REE
Sbjct: 290 LNFKAREE 297


>sp|HEM1_SACI3|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 WNFKTREE 8
NFK REE
Sbjct: 290 LNFKAREE 297


>sp|HEM1_SACI2|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 WNFKTREE 8
NFK REE
Sbjct: 290 LNFKAREE 297


>sp|HEM1_SACI1|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 WNFKTREE 8
NFK REE
Sbjct: 290 LNFKAREE 297


>sp|HEM1_SACS2|GLUTAMYL-TRNA reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WNFKTREE 8
NFK REE
Sbjct: 290 LNFKAREE 297


>sp|Y255_ARCFU|UNCHARACTERIZED protein AF_0255|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KTREELK 10
KTREELK
Sbjct: 38 KTREELK 44


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FKTREELK 10
FK +EE+K
Sbjct: 399 FKNKEEIK 406


>sp|PRIS_PYRIL|DNA primase small subunit PriS|Pyrobaculum islandicum (strain DSM

Query: 3 FKTREELK 10
FKT EELK
Sbjct: 42 FKTLEELK 49


>sp|CAS6_PYRFU|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NFKTREELK 10
F +REELK
Sbjct: 253 TFNSREELK 261




157|Sequence|781|790|REELKDTLES

>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 EELKDTLES 10
EELK TLE+
Sbjct: 245 EELKTTLET 253


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 1 REELKDTLES 10
R ELKD LES
Sbjct: 469 RRELKDRLES 478


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 REELKDTLES 10
RE++KD LE+
Sbjct: 142 REKIKDILET 151


>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 REELKDTLES 10
R LKDTL++
Sbjct: 36 RPNLKDTLDA 45


>sp|ASPD_METAC|L-ASPARTATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EELKDTL 8
EEL+DTL
Sbjct: 101 EELRDTL 107


>sp|RL30_METHJ|LARGE ribosomal subunit protein uL30|Methanospirillum hungatei JF-1

Query: 1 REELKDTLE 9
R E+KDTL+
Sbjct: 14 RREIKDTLK 22


>sp|DNAG_THEPD|DNA primase DnaG|Thermofilum pendens (strain DSM 2475

Query: 2 EELKDTLES 10
EELK TLE+
Sbjct: 321 EELKGTLEA 329


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 REELKDTLES 10
+EELK+ +ES
Sbjct: 174 KEELKEVIES 183


>sp|DHQS_META3|3-DEHYDROQUINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 REELKDTLES 10
+E +KD+LES
Sbjct: 17 KETVKDSLES 26


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 EELKDTLES 10
EE+K TLES
Sbjct: 451 EEVKRTLES 459


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 EELKDTLE 9
E +KDTLE
Sbjct: 72 EAMKDTLE 79


>sp|RL30_METAR|LARGE ribosomal subunit protein uL30|Methanocella arvoryzae (strain DSM

Query: 1 REELKDTL 8
R E+KDTL
Sbjct: 14 RPEIKDTL 21




158|Sequence|786|795|DTLESEMRAF

>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 DTLESEMR 8
DTL+SE+R
Sbjct: 124 DTLDSELR 131


>sp|AATE_THEGJ|A-TYPE ATP synthase subunit E|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DTLESEMRA 9
+ LESE+RA
Sbjct: 181 ERLESELRA 189




159|Sequence|791|800|EMRAFNIDRE

>sp|AROE_METAR|SHIKIMATE dehydrogenase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 1 EMRAFNID 8
+MRAFN D
Sbjct: 92 QMRAFNTD 99


>sp|ACTH_THEAC|ARCHAEAL actin homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EMRAFNIDR 9
E+R FNI R
Sbjct: 137 EVRQFNITR 145


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FNIDRE 10
FNIDRE
Sbjct: 391 FNIDRE 396


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MRAFNID 8
+RAFN+D
Sbjct: 132 IRAFNVD 138


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 1 EMRAFNIDR 9
+ R FN+DR
Sbjct: 16 DCRGFNLDR 24


>sp|DNLI_METST|DNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 RAFNIDRE 10
+A+NID+E
Sbjct: 183 QAYNIDKE 190


>sp|RNZ_PICTO|RIBONUCLEASE Z|Picrophilus torridus (strain ATCC 700027

Query: 1 EMRAFNIDRE 10
EM FN+D++
Sbjct: 294 EMLEFNVDKK 303


>sp|G3PP_PYRAB|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 2 MRAFNIDRE 10
++AFN+D +
Sbjct: 160 LKAFNVDAQ 168




160|Sequence|796|805|NIDRELGSAN

>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 2 IDRELGSAN 10
IDRE+G N
Sbjct: 327 IDREVGRIN 335


>sp|Y2165_ARCFU|UNCHARACTERIZED protein AF_2165|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NIDRELGSAN 10
++DRE+G+ N
Sbjct: 235 DLDREVGNCN 244


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IDRELG 7
IDRELG
Sbjct: 153 IDRELG 158


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IDRELG 7
IDRELG
Sbjct: 153 IDRELG 158


>sp|G3P2_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 IDRELG 7
IDRELG
Sbjct: 153 IDRELG 158


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NIDRELG 7
NID ELG
Sbjct: 624 NIDSELG 630


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 2 IDRELGSAN 10
+++ELG+AN
Sbjct: 29 LEKELGNAN 37




161|Sequence|801|810|LGSANVISWN

>sp|SECD_METTH|PROTEIN-EXPORT membrane protein SecD|Methanothermobacter thermautotrophicus

Query: 1 LGSANVISWN 10
LG+A VI WN
Sbjct: 282 LGAAAVIRWN 291


>sp|NADM_SACS2|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LGSANVISWN 10
LG NVI W+
Sbjct: 15 LGHLNVIKWS 24


>sp|R1PKD_THEKO|ADP-DEPENDENT ribose-1-phosphate kinase|Thermococcus kodakarensis (strain ATCC

Query: 2 GSANVISW 9
+AN ISW
Sbjct: 41 AAANTISW 48


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 1 LGSANVISW 9
LGS V SW
Sbjct: 77 LGSIKVSSW 85




162|Sequence|806|815|VISWNHHEFE

>sp|MFNB_ARCFU|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ISWNHHE 8
ISWNH E
Sbjct: 190 ISWNHIE 196


>sp|TRM1_THEVO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma volcanium

Query: 4 WNHHEF 9
WNHH +
Sbjct: 202 WNHHYY 207


>sp|PSTB2_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain

Query: 4 WNHHEFE 10
W H+EF+
Sbjct: 43 WRHYEFD 49


>sp|GGR_THEAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ISWNHHEFE 10
I+W H+ FE
Sbjct: 228 INWIHNRFE 236


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 4 WNHHE 8
WNH+E
Sbjct: 674 WNHYE 678


>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VISWNHHEF 9
+I W+ HEF
Sbjct: 254 MILWSTHEF 262


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 VISWNHHEFE 10
V WN EFE
Sbjct: 208 VKGWNEIEFE 217


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 4 WNHHEF 9
W +HEF
Sbjct: 520 WKNHEF 525


>sp|MCRD_METTH|METHYL-COENZYME M reductase I operon|Methanothermobacter thermautotrophicus

Query: 1 VISWNHHEFE 10
+IS HEFE
Sbjct: 49 IISVKGHEFE 58


>sp|PYRF_NATPD|OROTIDINE 5'-phosphate decarboxylase|Natronomonas pharaonis (strain ATCC

Query: 4 WNHHE 8
WN HE
Sbjct: 175 WNEHE 179


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 2 ISWNHHEFE 10
++WN HE E
Sbjct: 54 VAWNWHEPE 62


>sp|AROD_THEGJ|3-DEHYDROQUINATE dehydratase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 NHHEFE 10
+HH+FE
Sbjct: 109 SHHDFE 114


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 ISWNHHE 8
I+WN HE
Sbjct: 56 IAWNWHE 62


>sp|NK_METTH|NUCLEOSIDE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 NHHEFE 10
NHHE +
Sbjct: 189 NHHEID 194


>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 2 ISWNHHEF 9
+ W HH F
Sbjct: 293 VVWMHHMF 300




163|Sequence|811|820|HHEFEVKYEC

>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 HHEFEVKYEC 10
HH FE EC
Sbjct: 27 HHIFEADIEC 36


>sp|AROE_METAR|SHIKIMATE dehydrogenase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 1 HHEFEVKYE 9
+H+FEVK E
Sbjct: 34 YHKFEVKGE 42


>sp|TBP_METS3|TATA-BOX-BINDING protein|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 HEFEVKYE 9
HEFE+K +
Sbjct: 93 HEFEIKIQ 100


>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 3 EFEVKYE 9
EFE+KY+
Sbjct: 245 EFEIKYD 251


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 EFEVKYE 9
EFE+KY+
Sbjct: 245 EFEIKYD 251


>sp|Y127_METJA|PUTATIVE RNase MJ0127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HHEFEVKYE 9
HH F + YE
Sbjct: 81 HHYFGINYE 89


>sp|DNLI_PYRFU|DNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EFEVKYE 9
EFE+KY+
Sbjct: 245 EFEIKYD 251


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 HHEFEVKYE 9
HH E++YE
Sbjct: 209 HHWIELEYE 217


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 HHEFEVKYE 9
HH E++YE
Sbjct: 209 HHWIELEYE 217


>sp|DNLI_PYRHO|DNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EFEVKYE 9
EFE+KY+
Sbjct: 245 EFEIKYD 251


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 HEFEVKYE 9
HEF+ YE
Sbjct: 173 HEFDSSYE 180


>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 EFEVKYE 9
EFE+KY+
Sbjct: 247 EFEMKYD 253


>sp|CREN7_PYRAE|CHROMATIN protein Cren7|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HHEFEVKYE 9
+ E+EV+YE
Sbjct: 7 NREYEVEYE 15


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HEFEVKYE 9
HEF+ YE
Sbjct: 171 HEFDSAYE 178


>sp|THI4_PYRFU|THIAMINE thiazole synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EFEVKYE 9
EF+++YE
Sbjct: 85 EFDIRYE 91


>sp|THI4_PYRAB|THIAMINE thiazole synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 EFEVKYE 9
EF+++YE
Sbjct: 85 EFDIRYE 91


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 FEVKYE 9
FEVKYE
Sbjct: 4 FEVKYE 9


>sp|FEN_PICTO|FLAP endonuclease 1|Picrophilus torridus (strain ATCC 700027

Query: 1 HHEFEVKY 8
H+++E+K+
Sbjct: 285 HNDYEIKF 292


>sp|RS24_METST|SMALL ribosomal subunit protein eS24|Methanosphaera stadtmanae (strain

Query: 5 EVKYEC 10
E+K+EC
Sbjct: 18 EIKFEC 23




164|Sequence|816|825|VKYECLAEEI

>sp|RS7_AERPE|SMALL ribosomal subunit protein uS7|Aeropyrum pernix (strain ATCC 700893

Query: 4 ECLAEEI 10
ECLAEE+
Sbjct: 172 ECLAEEL 178


>sp|RS7_METKA|SMALL ribosomal subunit protein uS7|Methanopyrus kandleri (strain AV19 /

Query: 4 ECLAEEI 10
ECLAEEI
Sbjct: 164 ECLAEEI 170


>sp|RS7_PYRIL|SMALL ribosomal subunit protein uS7|Pyrobaculum islandicum (strain DSM

Query: 4 ECLAEEI 10
ECLA+EI
Sbjct: 191 ECLADEI 197


>sp|RS7_PYRAE|SMALL ribosomal subunit protein uS7|Pyrobaculum aerophilum (strain ATCC

Query: 4 ECLAEEI 10
ECLA+EI
Sbjct: 190 ECLADEI 196


>sp|GLCDH_METS5|GLUCOSE 1-dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 2 KYECLAEEI 10
+YE AEEI
Sbjct: 275 RYELTAEEI 283


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VKYECLAEEI 10
+K EC AE++
Sbjct: 229 LKNECTAEDV 238


>sp|RS7_PYRNV|SMALL ribosomal subunit protein uS7|Pyrobaculum neutrophilum (strain DSM

Query: 4 ECLAEEI 10
ECLA+E+
Sbjct: 191 ECLADEL 197


>sp|COFE_ARCFU|COENZYME F420:L-glutamate ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VKYECLAEEI 10
V EC+A+EI
Sbjct: 189 VTVECVADEI 198


>sp|RS7_METM6|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain C6

Query: 4 ECLAEEI 10
+CLA+EI
Sbjct: 154 QCLADEI 160


>sp|RS7_METM5|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain C5

Query: 4 ECLAEEI 10
+CLA+EI
Sbjct: 154 QCLADEI 160


>sp|RS7_METM7|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain C7

Query: 4 ECLAEEI 10
+CLA+EI
Sbjct: 154 QCLADEI 160


>sp|RS7_META3|SMALL ribosomal subunit protein uS7|Methanococcus aeolicus (strain ATCC

Query: 4 ECLAEEI 10
+CLA+EI
Sbjct: 154 QCLADEI 160


>sp|RS7_ARCFU|SMALL ribosomal subunit protein uS7|Archaeoglobus fulgidus (strain ATCC

Query: 4 ECLAEEI 10
+CLA+EI
Sbjct: 161 QCLADEI 167




165|Sequence|821|830|LAEEIKIGDY

>sp|Y200_METJA|UNCHARACTERIZED hydrogenase expression/formation protein

Query: 1 LAEEIKIGDY 10
L +E+KIGDY
Sbjct: 37 LDKEVKIGDY 46


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AEEIKIGDY 10
AE +K+GDY
Sbjct: 515 AEMVKVGDY 523


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 AEEIKIGDY 10
A+E++IGDY
Sbjct: 142 ADELEIGDY 150


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 3 EEIKIGDY 10
EEI++GDY
Sbjct: 408 EEIELGDY 415


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 3 EEIKIGDY 10
EEI++GDY
Sbjct: 408 EEIELGDY 415


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LAEEIKIGD 9
LA EIK GD
Sbjct: 414 LAREIKEGD 422


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EEIKIGDY 10
+E+K+GDY
Sbjct: 114 KELKVGDY 121


>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 1 LAEEIKIGDY 10
L E+I +GDY
Sbjct: 240 LPEDINLGDY 249


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 5 IKIGDY 10
IKIGDY
Sbjct: 224 IKIGDY 229


>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LAEEIKIGDY 10
+AE+I++GD+
Sbjct: 260 VAEKIQVGDH 269


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 AEEIKIGD 9
EE+K+GD
Sbjct: 965 GEEVKVGD 972


>sp|Y2093_ARCFU|UNCHARACTERIZED protein AF_2093|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LAEEIKIGD 9
+E++KIGD
Sbjct: 67 FSEKVKIGD 75


>sp|Y1641_METJA|UNCHARACTERIZED protein MJ1641|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAEEIKIGDY 10
LAE+I I DY
Sbjct: 113 LAEDIIIKDY 122


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 AEEIKIGD 9
A E+KIGD
Sbjct: 982 ALEVKIGD 989


>sp|Y876_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 2 AEEIKIGDY 10
AEE+KI +Y
Sbjct: 174 AEELKIQEY 182


>sp|RNP2_METMJ|RIBONUCLEASE P protein component 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 EEIKIGD 9
EE+KIG+
Sbjct: 118 EEVKIGE 124


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain

Query: 1 LAEEIKIG 8
+AE+IKIG
Sbjct: 1 MAEKIKIG 8


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 1 LAEEIKIG 8
+AE+IKIG
Sbjct: 1 MAEKIKIG 8


>sp|LEUD1_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 LAEEIKIGDY 10
A+E+K GD+
Sbjct: 42 FAKEVKKGDF 51


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LAEEIKIGDY 10
L E +K+G+Y
Sbjct: 298 LKEGVKVGNY 307


>sp|ARLY_PYRCJ|ARGININOSUCCINATE lyase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LAEEIKIG 8
LAEEIK G
Sbjct: 382 LAEEIKRG 389




166|Sequence|826|835|KIGDYYLRLL

>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KIGDYYLRLL 10
KI +Y+LRL+
Sbjct: 538 KIKEYFLRLI 547


>sp|Y709_METMP|PROBABLE minor pilin MMP0709|Methanococcus maripaludis (strain DSM 14266

Query: 3 GDYYLRLL 10
G YYLRL+
Sbjct: 180 GQYYLRLV 187


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM

Query: 1 KIGDYYLR 8
+ GDYY R
Sbjct: 12 RFGDYYAR 19


>sp|PUR5_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KIGDYYLRL 9
+ GDYYL L
Sbjct: 47 EFGDYYLVL 55


>sp|PUR5_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C7 /

Query: 1 KIGDYYLRL 9
+ GDYYL L
Sbjct: 47 EFGDYYLVL 55


>sp|PUR5_METM6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C6 /

Query: 1 KIGDYYLRL 9
+ GDYYL L
Sbjct: 47 EFGDYYLVL 55


>sp|PUR5_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C5 /

Query: 1 KIGDYYLRL 9
+ GDYYL L
Sbjct: 47 EFGDYYLVL 55


>sp|PUR5_METVS|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KIGDYYLRL 9
+ GDYYL L
Sbjct: 47 EFGDYYLVL 55


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 IGDYYLRLL 10
+GDY RLL
Sbjct: 161 VGDYVRRLL 169


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 GDYYLRLL 10
GD+Y+R L
Sbjct: 30 GDFYVRYL 37


>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 1 KIGDYYLR 8
+ GDYY R
Sbjct: 12 RFGDYYRR 19


>sp|PUR5_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIGDYYLRL 9
+ GDYYL L
Sbjct: 46 EFGDYYLVL 54


>sp|Y295_ARCFU|UNCHARACTERIZED protein AF_0295|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KIGDYYL 7
+IGDY+L
Sbjct: 22 RIGDYFL 28


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KIGDYYLRL 9
K+G YY+++
Sbjct: 45 KVGGYYIQM 53


>sp|RL6_THEVO|LARGE ribosomal subunit protein uL6|Thermoplasma volcanium (strain ATCC

Query: 1 KIGDYYLRLL 10
K D Y+RLL
Sbjct: 37 KFADNYVRLL 46


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 GDYYLRLL 10
DYY RLL
Sbjct: 387 ADYYPRLL 394


>sp|Y1265_ARCFU|UPF0173 metal-dependent hydrolase AF_1265|Archaeoglobus fulgidus (strain

Query: 2 IGDYY 6
IGDYY
Sbjct: 164 IGDYY 168


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 IGDYYLRL 9
+GD+Y+R+
Sbjct: 326 LGDHYVRV 333


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 3 GDYYL 7
GDYYL
Sbjct: 384 GDYYL 388


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 IGDYYLRLL 10
+GDY R+L
Sbjct: 159 VGDYVRRIL 167


>sp|YNI2_METTL|UNCHARACTERIZED protein in nifH2 3'region|Methanothermococcus

Query: 3 GDYYLR 8
GDYY+R
Sbjct: 81 GDYYVR 86




167|Sequence|831|840|YLRLLLEEDE

>sp|PRIS_ARCFU|DNA primase small subunit PriS|Archaeoglobus fulgidus (strain ATCC

Query: 1 YLRLLLEEDE 10
YLR LEEDE
Sbjct: 195 YLRKKLEEDE 204


>sp|SECD_HALVD|PROTEIN-EXPORT membrane protein SecD|Haloferax volcanii (strain ATCC 29605

Query: 2 LRLLLEED 9
LRLLL ED
Sbjct: 516 LRLLLTED 523


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 1 YLRLLLEEDE 10
Y+R+L+E DE
Sbjct: 311 YVRMLIEGDE 320


>sp|AGLP_HALVD|HEXURONIC acid methyltransferase AglP|Haloferax volcanii (strain ATCC 29605

Query: 2 LRLLLEEDE 10
+RLLLEE E
Sbjct: 57 IRLLLEEAE 65


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 1 YLRLLLEEDE 10
Y R+L E+DE
Sbjct: 152 YARMLKEQDE 161


>sp|FAEHP_METST|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LRLLLEEDE 10
+RL L+EDE
Sbjct: 396 MRLALDEDE 404


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 1 YLRLLLEEDE 10
Y R+L E+DE
Sbjct: 152 YARMLKEQDE 161


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YLRLLLEE 8
Y+R++LEE
Sbjct: 99 YIRVILEE 106




168|Sequence|836|845|LEEDENEESG

***** No hits found ******


169|Sequence|841|850|NEESGSIKRS

>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 2 EESGSIKRS 10
EESG++KRS
Sbjct: 203 EESGALKRS 211


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 2 EESGSIKRS 10
EESG++KRS
Sbjct: 203 EESGALKRS 211


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 2 EESGSIKRS 10
EE+G+IKR+
Sbjct: 207 EETGAIKRA 215


>sp|RS19E_METTH|SMALL ribosomal subunit protein eS19|Methanothermobacter

Query: 2 EESGSIKR 9
EESG IKR
Sbjct: 106 EESGLIKR 113


>sp|END4_METLZ|PROBABLE endonuclease 4|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 NEESGSIKR 9
N+E+GS+ R
Sbjct: 202 NDEAGSLDR 210


>sp|Y962_METM5|UPF0285 protein MmarC5_0962|Methanococcus maripaludis (strain C5 /

Query: 1 NEESGSI 7
NEESG+I
Sbjct: 296 NEESGAI 302




170|Sequence|846|855|SIKRSYEFFN

>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 SIKRSYEFFN 10
S K SYE FN
Sbjct: 12 SFKESYELFN 21


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SIKRSYEFF 9
++K +YEFF
Sbjct: 162 TVKLAYEFF 170


>sp|CIMA_METTH|PUTATIVE (R)-citramalate synthase CimA|Methanothermobacter

Query: 3 KRSYEFF 9
+RSYEF+
Sbjct: 172 ERSYEFY 178


>sp|TRPD_METMP|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 SIKRSYEFFN 10
S + SYE FN
Sbjct: 12 SFEESYELFN 21


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 SIKRSYEFFN 10
S + SYE FN
Sbjct: 12 SFEESYELFN 21


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 SIKRSYEFFN 10
S + SYE FN
Sbjct: 12 SFEESYELFN 21


>sp|MTAP_PYRHO|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KRSYEFFN 10
KR Y F+N
Sbjct: 109 KREYTFYN 116


>sp|MTAP_THEKO|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KRSYEFFN 10
KR Y F+N
Sbjct: 109 KRDYTFYN 116


>sp|MTAP_PYRFU|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KRSYEFFN 10
KR Y F+N
Sbjct: 109 KREYTFYN 116


>sp|MTAP_PYRAB|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 3 KRSYEFFN 10
KR Y F+N
Sbjct: 109 KREYTFYN 116


>sp|TRPD_THEKO|ANTHRANILATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 SIKRSYEFFN 10
S + +YE FN
Sbjct: 14 SFEEAYELFN 23


>sp|TOP6A_HYPBU|TYPE 2 DNA topoisomerase 6|Hyperthermus butylicus (strain DSM 5456

Query: 1 SIKRSYEFFN 10
IKR+YE N
Sbjct: 326 DIKRAYELKN 335


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 SIKRSYEFFN 10
+ + SYE FN
Sbjct: 12 TFEESYELFN 21


>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IKRSYEFF 9
I +SYEFF
Sbjct: 398 ILKSYEFF 405




171|Sequence|851|860|YEFFNELYHR

>sp|TRPD_THEKO|ANTHRANILATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 YEFFNEL 7
YE FNEL
Sbjct: 19 YELFNEL 25


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EFFNELYH 9
EFF++ YH
Sbjct: 604 EFFSKFYH 611


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 FNELYHR 10
FNE YH+
Sbjct: 575 FNEFYHK 581


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 YEFFNELY 8
YE NELY
Sbjct: 295 YELRNELY 302


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 3 FFNELYHR 10
FF+E +HR
Sbjct: 132 FFSEDFHR 139


>sp|MRE11_NANEQ|DNA double-strand break repair protein|Nanoarchaeum equitans (strain

Query: 1 YEFFNELYHR 10
Y+FF ELY +
Sbjct: 333 YDFFMELYEK 342


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 1 YEFFNELYHR 10
+ F+N+ Y+R
Sbjct: 212 FSFYNDYYYR 221


>sp|AAT_THEKO|ASPARTATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YEFFNEL 7
YEFFN +
Sbjct: 5 YEFFNRI 11


>sp|HEM1_METB6|GLUTAMYL-TRNA reductase|Methanoregula boonei (strain DSM 21154

Query: 5 NELYH 9
NELYH
Sbjct: 223 NELYH 227


>sp|REG7_PYRFU|HTH-TYPE transcriptional regulator LrpA|Pyrococcus furiosus (strain ATCC

Query: 1 YEFFNELY 8
Y+F ELY
Sbjct: 87 YDFVKELY 94


>sp|GUAAA_METB6|GMP synthase [glutamine-hydrolyzing] subunit A|Methanoregula boonei

Query: 1 YEFFNELYHR 10
Y FN L HR
Sbjct: 10 YGQFNHLIHR 19


>sp|Y670_METJA|UNCHARACTERIZED protein MJ0670|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YEFFNELYHR 10
Y+F E+Y R
Sbjct: 199 YDFLKEIYKR 208


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 1 YEFFNELY 8
Y+F NE Y
Sbjct: 1018 YDFINERY 1025


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 YEFFNELY 8
YE+F E Y
Sbjct: 629 YEYFREQY 636




172|Sequence|856|865|ELYHRFLLTP

>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 2 LYHRFLLTP 10
L+ RF+LTP
Sbjct: 15 LFIRFILTP 23


>sp|AROE_METMA|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LYHRFLLTP 10
+YH F +TP
Sbjct: 33 IYHAFRVTP 41


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 2 LYHRFLLTP 10
L HR+ LTP
Sbjct: 238 LLHRYPLTP 246


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 1 ELYHRFL 7
ELYH+++
Sbjct: 1120 ELYHKYM 1126


>sp|RF1_SACS2|PEPTIDE chain release factor subunit|Saccharolobus solfataricus (strain

Query: 1 ELYHRFL 7
E+YH FL
Sbjct: 189 EMYHNFL 195


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 ELYHRF 6
ELYH F
Sbjct: 671 ELYHEF 676




173|Sequence|861|870|FLLTPKVNMK

>sp|MOAA_METM7|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C7 /

Query: 3 LTPKVNMK 10
+TPK N+K
Sbjct: 16 ITPKCNLK 23


>sp|MOAA_METM5|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C5 /

Query: 3 LTPKVNMK 10
+TPK N+K
Sbjct: 16 ITPKCNLK 23


>sp|MOAA_METM6|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C6 /

Query: 3 LTPKVNMK 10
+TPK N+K
Sbjct: 16 ITPKCNLK 23


>sp|MOAA_METMP|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LTPKVNMK 10
+TPK N+K
Sbjct: 16 ITPKCNLK 23




174|Sequence|866|875|KVNMKCLCLQ

***** No hits found ******


175|Sequence|871|880|CLCLQALAIV

>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LCLQALA 8
LCL+ALA
Sbjct: 64 LCLRALA 70




176|Sequence|876|885|ALAIVYGRCH

>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 ALAIVYG 7
ALAIVYG
Sbjct: 186 ALAIVYG 192


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 ALAIVYG 7
ALA+VYG
Sbjct: 190 ALAVVYG 196


>sp|CSL4_SACS2|EXOSOME complex component Csl4|Saccharolobus solfataricus (strain ATCC

Query: 2 LAIVYGRC 9
L ++Y RC
Sbjct: 144 LGVIYARC 151


>sp|Y1051_ARCFU|UNCHARACTERIZED protein AF_1051|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AIVYGR 8
AIVYGR
Sbjct: 91 AIVYGR 96




177|Sequence|881|890|YGRCHEEIGP

>sp|OGG1_SACS2|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus solfataricus (strain ATCC

Query: 1 YGRCHEEIGP 10
YGR EEI P
Sbjct: 97 YGRLKEEIKP 106


>sp|THIE_ARCFU|THIAMINE-PHOSPHATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YGRCHEEIG 9
+GR HEE+
Sbjct: 18 FGRTHEELA 26


>sp|OGG1_SACI7|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 YGRCHEEIGP 10
YG+ EEI P
Sbjct: 97 YGKLKEEITP 106


>sp|OGG1_SACI6|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YGRCHEEIGP 10
YG+ EEI P
Sbjct: 97 YGKLKEEITP 106


>sp|OGG1_SACI4|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YGRCHEEIGP 10
YG+ EEI P
Sbjct: 97 YGKLKEEITP 106


>sp|OGG1_SACI3|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain M.16.27)

Query: 1 YGRCHEEIGP 10
YG+ EEI P
Sbjct: 97 YGKLKEEITP 106


>sp|OGG1_SACI2|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 YGRCHEEIGP 10
YG+ EEI P
Sbjct: 97 YGKLKEEITP 106


>sp|OGG1_SACI1|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 YGRCHEEIGP 10
YG+ EEI P
Sbjct: 97 YGKLKEEITP 106


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YGRCHEEIG 9
YG+ HE IG
Sbjct: 90 YGKLHEGIG 98


>sp|CG121_PYRAB|KEOPS complex subunit Cgi121|Pyrococcus abyssi (strain GE5 /

Query: 2 GRCHEEI 8
+CHEE+
Sbjct: 67 AKCHEEV 73


>sp|RL24E_METTH|LARGE ribosomal subunit protein eL24|Methanothermobacter

Query: 4 CHEEIGP 10
CHEEI P
Sbjct: 7 CHEEIEP 13


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 1 YGRCHEEIGP 10
Y R HE + P
Sbjct: 490 YNRLHESLAP 499


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CHEEI 8
CHEEI
Sbjct: 173 CHEEI 177


>sp|HEM12_PYRAR|GLUTAMYL-TRNA reductase 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RCHEEIGP 10
RC E IGP
Sbjct: 31 RCIEVIGP 38


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 RCHEEIG 9
R HEE+G
Sbjct: 405 RIHEELG 411


>sp|TRPD_METKA|ANTHRANILATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 RCHEEIG 9
RC EE+G
Sbjct: 138 RCIEEVG 144


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YGRCHEEIGP 10
YG E IGP
Sbjct: 29 YGEVGEVIGP 38


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 CHEEIG 9
CH+E+G
Sbjct: 200 CHQEVG 205




178|Sequence|886|895|EEIGPFTDTR

>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 1 EEIGPFTDTR 10
EE G FTD+R
Sbjct: 412 EEKGSFTDSR 421


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 4 GPFTDT 9
GPFTDT
Sbjct: 125 GPFTDT 130


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 EEIGPFTDT 9
EE+G FT+T
Sbjct: 1175 EEVGRFTET 1183


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 1 EEIGPFTDT 9
E+IGP D+
Sbjct: 198 EQIGPMADS 206


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 IGPFTD 8
IGP+TD
Sbjct: 96 IGPYTD 101


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 IGPFTD 8
IGP+TD
Sbjct: 96 IGPYTD 101


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 EEIGPFTDT 9
E+IGP T T
Sbjct: 206 EQIGPITRT 214


>sp|GATA_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus vannielii (strain ATCC

Query: 1 EEIGPFTDT 9
++IGP T T
Sbjct: 187 DQIGPLTKT 195


>sp|MFNB_METKA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 EEIGPFTDT 9
EE+G F D+
Sbjct: 169 EEVGEFVDS 177


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 1 EEIGPFTDT 9
++IGP T T
Sbjct: 189 DQIGPLTKT 197


>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 EEIGPFTD 8
EE+ PF+D
Sbjct: 242 EEVEPFSD 249


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 3 IGPFTDT 9
IGP TDT
Sbjct: 118 IGPSTDT 124


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 IGPFTDT 9
IG FTDT
Sbjct: 323 IGKFTDT 329


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 4 GPFTD 8
GPFTD
Sbjct: 129 GPFTD 133


>sp|LRP_HALS3|HTH-TYPE transcriptional regulator Lrp|Halobacterium salinarum (strain ATCC

Query: 3 IGPFTDT 9
IG FTDT
Sbjct: 106 IGKFTDT 112




179|Sequence|891|900|FTDTRYIIGM

>sp|TRPB_META3|TRYPTOPHAN synthase beta chain|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FTDTRYIIG 9
F DT YIIG
Sbjct: 178 FEDTHYIIG 186


>sp|RS4_METTH|SMALL ribosomal subunit protein uS4|Methanothermobacter

Query: 3 DTRYIIGM 10
D RY++GM
Sbjct: 54 DARYLLGM 61


>sp|ENO_PYRHO|ENOLASE horikoshii (strain ATCC 700860

Query: 1 FTDTRYIIG 9
F D +YI+G
Sbjct: 252 FKDGKYIVG 260


>sp|LYSY_THEKO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 FTDTRYIIG 9
F D +Y+IG
Sbjct: 264 FPDPKYVIG 272


>sp|TRPB_HALVD|TRYPTOPHAN synthase beta chain|Haloferax volcanii (strain ATCC 29605

Query: 3 DTRYIIG 9
DT Y+IG
Sbjct: 183 DTHYVIG 189


>sp|TRPB_HALSA|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 700922

Query: 3 DTRYIIG 9
DT Y+IG
Sbjct: 191 DTHYVIG 197


>sp|TRPB_HALS3|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 29341

Query: 3 DTRYIIG 9
DT Y+IG
Sbjct: 191 DTHYVIG 197


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TDTRYII 8
TD+RY++
Sbjct: 141 TDSRYVV 147


>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FTDTRYIIG 9
TD +Y++G
Sbjct: 98 LTDIKYVLG 106


>sp|TRPB2_METTM|TRYPTOPHAN synthase beta chain 2|Methanothermobacter marburgensis (strain ATCC

Query: 3 DTRYIIG 9
DT Y+IG
Sbjct: 179 DTHYLIG 185


>sp|G1PDH_HALWD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloquadratum walsbyi (strain DSM 16790

Query: 2 TDTRYIIGM 10
TD Y+IG+
Sbjct: 83 TDAGYLIGL 91


>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 3 DTRYIIG 9
DT Y+IG
Sbjct: 181 DTHYLIG 187




180|Sequence|896|905|YIIGMLERCT

>sp|END4_CENSY|PROBABLE endonuclease 4|Cenarchaeum symbiosum (strain A)

Query: 2 IIGMLERC 9
+IG +ERC
Sbjct: 90 LIGEVERC 97




181|Sequence|901|910|LERCTDKLER

>sp|Y1954_ARCFU|PUTATIVE amidase AF_1954|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LERCTDKLER 10
+E C +K+ER
Sbjct: 22 VEECLEKIER 31


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 RCTDKLE 9
RC+D+LE
Sbjct: 222 RCSDRLE 228


>sp|CBID_METAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 LERCTDKL 8
L RCTDK+
Sbjct: 221 LIRCTDKV 228


>sp|CBID_METMA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LERCTDKL 8
L RCTDK+
Sbjct: 221 LIRCTDKV 228


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ERCTDKLE 9
E CTD+LE
Sbjct: 256 ENCTDQLE 263


>sp|CBID_METBF|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LERCTDKL 8
L RCTDK+
Sbjct: 221 LIRCTDKV 228


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 3 RCTDKLE 9
RC+DKL+
Sbjct: 222 RCSDKLD 228


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 RCTDKLE 9
RC+DKL+
Sbjct: 222 RCSDKLD 228


>sp|GGGPS_METTM|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 1 LERCTDKL 8
++RCTD++
Sbjct: 188 VKRCTDQI 195


>sp|GGGPS_METTH|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 LERCTDKL 8
++RCTD++
Sbjct: 188 VKRCTDQI 195


>sp|Y763_ARCFU|UNCHARACTERIZED protein AF_0763|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ERCTDKLE 9
ERC KLE
Sbjct: 178 ERCVCKLE 185


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 RCTDKLE 9
RC DKL+
Sbjct: 221 RCEDKLD 227


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LERCTDKLER 10
L++ T+KLE+
Sbjct: 383 LQKATEKLEK 392




182|Sequence|906|915|DKLERDRLIL

>sp|RNH2_METHJ|RIBONUCLEASE HII|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KLERDRLI 9
K+ERDR+I
Sbjct: 145 KVERDRII 152


>sp|GLNA_PYRHO|GLUTAMINE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DKLERDRLI 9
D+LERD+++
Sbjct: 386 DELERDKVV 394


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 DKLERDRLI 9
D+LE+D+++
Sbjct: 382 DELEKDKVV 390


>sp|Y1211_METJA|UNCHARACTERIZED protein MJ1211|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKLERDRLI 9
DKL++DRL+
Sbjct: 14 DKLDKDRLL 22


>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 DKLERDRLI 9
D+ ERDR+I
Sbjct: 552 DEAERDRII 560


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 1 DKLERDRLI 9
D+ ERDR+I
Sbjct: 552 DEAERDRII 560


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 4 ERDRLIL 10
ERD+LIL
Sbjct: 395 ERDKLIL 401


>sp|Y1546_ARCFU|UNCHARACTERIZED MscS family protein AF_1546|Archaeoglobus fulgidus (strain ATCC

Query: 1 DKLERDRLIL 10
DK++RD+L L
Sbjct: 48 DKMKRDQLEL 57


>sp|Y052_METJA|UNCHARACTERIZED protein MJ0052|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KLERDRLIL 10
KL+RD+LI+
Sbjct: 174 KLDRDKLIV 182


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 1 DKLERDRLI 9
+K+ER+RLI
Sbjct: 259 EKVERERLI 267


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DKLERDRL 8
DKLE D+L
Sbjct: 218 DKLESDKL 225




183|Sequence|911|920|DRLILFLNKL

>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RLILFLNK 9
RLILF+N+
Sbjct: 200 RLILFVNE 207


>sp|YHIT_SACS2|UNCHARACTERIZED HIT-like protein SSO2163|Saccharolobus solfataricus (strain ATCC

Query: 1 DRLILFLNKL 10
DR++ FL+K
Sbjct: 21 DRVVAFLDKF 30


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 RLILFLNKL 10
R ILF+NK+
Sbjct: 142 RPILFINKV 150


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RLILFLNKL 10
R ILF+NK+
Sbjct: 141 RPILFINKV 149


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RLILFLNKL 10
R ILF+NK+
Sbjct: 141 RPILFINKV 149


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RLILFLNKL 10
R ILF+NK+
Sbjct: 141 RPILFINKV 149


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 RLILFLNKL 10
R ILF+NK+
Sbjct: 141 RPILFINKV 149


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 2 RLILFLNKL 10
R ILF+NK+
Sbjct: 141 RPILFINKV 149


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 2 RLILFLNKL 10
R ILF+NK+
Sbjct: 141 RPILFINKV 149


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 RLILFLNKL 10
R ILF+NK+
Sbjct: 141 RPILFINKV 149


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 RLILFLNKL 10
R ILF+NK+
Sbjct: 141 RPILFINKV 149


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 RLILFLNKL 10
R ILF+NK+
Sbjct: 141 RPILFINKV 149


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RLILFLNKL 10
R +LF+NK+
Sbjct: 146 RPVLFINKI 154


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RLILFLNKL 10
R +LF+NK+
Sbjct: 146 RPVLFINKI 154


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RLILFLNKL 10
R +LF+NK+
Sbjct: 146 RPVLFINKI 154


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RLILFLNKL 10
R +LF+NK+
Sbjct: 146 RPVLFINKI 154


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RLILFLNKL 10
R +LF+NK+
Sbjct: 146 RPVLFINKI 154


>sp|Y080_METJA|UNCHARACTERIZED transcriptional regulator MJ0080|Methanocaldococcus jannaschii

Query: 1 DRLILFLNKL 10
DR+I F NKL
Sbjct: 101 DRIIEFTNKL 110


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 2 RLILFLNKL 10
R +LF+NK+
Sbjct: 141 RPVLFINKI 149


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 RLILFLNKL 10
R +LF+NK+
Sbjct: 141 RPVLFINKI 149


>sp|Y1340_METJA|UNCHARACTERIZED protein MJ1340|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DRLILFLNK 9
DR++L LNK
Sbjct: 3 DRVLLELNK 11


>sp|Y310_METJA|UNCHARACTERIZED protein MJ0310|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DRLILFLNK 9
DR++L LNK
Sbjct: 3 DRVLLELNK 11




184|Sequence|916|925|FLNKLILNKK

>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLNKLILNKK 10
LNK ILNKK
Sbjct: 373 LLNKFILNKK 382


>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LNKLILNKK 10
L KL+LNK+
Sbjct: 284 LEKLVLNKR 292


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 1 FLNKLILNKK 10
F N+LI+N++
Sbjct: 283 FKNELIINRE 292




185|Sequence|921|930|ILNKKNVKDL

>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LNKKNVKDL 10
+NK+NV+D+
Sbjct: 186 INKQNVRDI 194


>sp|PPS_METJA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NKKNVKDL 10
NKKN+KD+
Sbjct: 243 NKKNLKDM 250


>sp|HIS51_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 ILNKKNV 7
ILNKKNV
Sbjct: 172 ILNKKNV 178


>sp|Y1470_META3|UNCHARACTERIZED solute-binding protein Maeo_1470|Methanococcus aeolicus (strain

Query: 1 ILNKKNVK 8
ILNK NVK
Sbjct: 145 ILNKPNVK 152


>sp|Y361_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0361|Methanocaldococcus

Query: 1 ILNKKNVKDL 10
IL KK+VKD+
Sbjct: 5 ILAKKHVKDV 14


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 2 LNKKNVKDL 10
+ KNVKDL
Sbjct: 395 IEAKNVKDL 403


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LNKKNVKDL 10
+ KNVKDL
Sbjct: 395 IEAKNVKDL 403


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 2 LNKKNVKDL 10
LNKK +K+L
Sbjct: 271 LNKKEMKEL 279


>sp|IDSA_METJA|SHORT chain isoprenyl diphosphate synthase|Methanocaldococcus jannaschii

Query: 1 ILNKKNVKD 9
IL KNVKD
Sbjct: 264 ILGNKNVKD 272


>sp|ARLY_METMP|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LNKKNVKDL 10
LN+K KDL
Sbjct: 207 LNRKRTKDL 215


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 2 LNKKNVKDL 10
+ KNVKDL
Sbjct: 395 IEAKNVKDL 403


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LNKKNVKDL 10
+ KNVKDL
Sbjct: 395 IEAKNVKDL 403


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LNKKNVKDL 10
+ KNVKDL
Sbjct: 395 IEAKNVKDL 403


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LNKKNVKDL 10
+ KNVKDL
Sbjct: 395 IEAKNVKDL 403


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 2 LNKKNVKDL 10
+ KNVKDL
Sbjct: 395 IEAKNVKDL 403




186|Sequence|926|935|NVKDLMDSNG

>sp|Y1004_METJA|UNCHARACTERIZED protein MJ1004|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VKDLMDSN 9
V+DLMD N
Sbjct: 3 VRDLMDKN 10


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VKDLMDSNG 10
++DL+DS G
Sbjct: 51 IRDLLDSTG 59


>sp|MFNA_ARCFU|PROBABLE L-aspartate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VKDLMDSN 9
V+DLMD N
Sbjct: 140 VEDLMDEN 147


>sp|RNZ_HALMA|RIBONUCLEASE Z|Haloarcula marismortui (strain ATCC 43049

Query: 1 NVKDLMDSNG 10
N+K L+ +NG
Sbjct: 97 NIKQLIQANG 106


>sp|SYK_SULAC|LYSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VKDLMDSNG 10
+K LMD NG
Sbjct: 341 LKSLMDKNG 349


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 KDLMDS 8
KDLMDS
Sbjct: 307 KDLMDS 312


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 2 VKDLMDSNG 10
VK+L+DS G
Sbjct: 9 VKELLDSVG 17


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 NVKDLMDSN 9
N+K ++DSN
Sbjct: 121 NIKAMVDSN 129


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 2 VKDLMDSNG 10
VKD++DS+
Sbjct: 302 VKDILDSHA 310


>sp|DAPAL_THEAC|UNCHARACTERIZED DapA-like lyase Ta1157|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NVKDLMDSNG 10
NVK + DS+G
Sbjct: 156 NVKGIKDSSG 165




187|Sequence|931|940|MDSNGIRILV

>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 4 NGIRILV 10
NGIRIL+
Sbjct: 187 NGIRILI 193


>sp|CAS1C_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 MDSNGIRILV 10
+D+NGIR+ +
Sbjct: 37 VDTNGIRMQI 46


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 MDSNGIRILV 10
+D NGI +LV
Sbjct: 812 VDYNGISVLV 821


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DSNGIRIL 9
D NGIRI+
Sbjct: 815 DVNGIRII 822


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain

Query: 1 MDSNGIRI 8
M+SNG+++
Sbjct: 68 MESNGVKV 75


>sp|HPRT_METPS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocella paludicola (strain DSM 17711

Query: 1 MDSNGIRIL 9
+D NG++IL
Sbjct: 175 VDENGVKIL 183


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MDSNGIRIL 9
+DSNG++ +
Sbjct: 402 LDSNGVKFV 410


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MDSNGIRILV 10
MD+NG+ + V
Sbjct: 293 MDANGVAVEV 302


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 MDSNGIRIL 9
++ NG+R+L
Sbjct: 648 LEENGVRLL 656


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 MDSNGIRIL 9
++ NG+R+L
Sbjct: 648 LEENGVRLL 656


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 MDSNGIRIL 9
++ NG+R+L
Sbjct: 648 LEENGVRLL 656


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 MDSNGIRIL 9
++ NG+R+L
Sbjct: 648 LEENGVRLL 656


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 MDSNGIRIL 9
++ NG+R+L
Sbjct: 648 LEENGVRLL 656


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 MDSNGIRIL 9
++ NG+R+L
Sbjct: 648 LEENGVRLL 656


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 MDSNGIRIL 9
++ NG+R+L
Sbjct: 648 LEENGVRLL 656


>sp|Y1374_METJA|UNCHARACTERIZED protein MJ1374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DSNGIRILV 10
D +G+RIL+
Sbjct: 175 DFDGVRILI 183


>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 DSNGIRI 8
DSNG R+
Sbjct: 176 DSNGFRV 182


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DSNGIRI 8
DSNG R+
Sbjct: 176 DSNGFRV 182


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DSNGIRI 8
DSNG R+
Sbjct: 176 DSNGFRV 182


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 2 DSNGIRI 8
DSNG R+
Sbjct: 176 DSNGFRV 182


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DSNGIRI 8
DSNG R+
Sbjct: 176 DSNGFRV 182


>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 DSNGIRI 8
DSNG R+
Sbjct: 176 DSNGFRV 182


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MDSNGIR 7
+DSNGI+
Sbjct: 379 LDSNGIK 385




188|Sequence|936|945|IRILVDLLTL

***** No hits found ******


189|Sequence|941|950|DLLTLAHLHV

>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLLTLAHLHV 10
D+LTLA +HV
Sbjct: 146 DILTLADVHV 155


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 DLLTLAHLHV 10
DL+ + H+HV
Sbjct: 557 DLVQMGHVHV 566


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 DLLTLAHLHV 10
DL+ + H+HV
Sbjct: 554 DLVQMGHVHV 563


>sp|PHNC_HALSA|PHOSPHONATES import ATP-binding protein PhnC|Halobacterium salinarum (strain

Query: 1 DLLTLAHLH 9
DL TLA LH
Sbjct: 189 DLTTLASLH 197


>sp|Y1348_METJA|UNCHARACTERIZED protein MJ1348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLLTLAHL 8
DLL +AHL
Sbjct: 231 DLLAIAHL 238


>sp|SFSA_METST|SUGAR fermentation stimulation protein homolog|Methanosphaera

Query: 3 LTLAHLH 9
+TLAHLH
Sbjct: 29 ITLAHLH 35


>sp|RIBL_THEON|FAD synthase|Thermococcus onnurineus (strain NA1)

Query: 1 DLLTLAHLH 9
DLL + H+H
Sbjct: 18 DLLHVGHIH 26


>sp|MBLFP_SULTO|METALLO-BETA-LACTAMASE fold-containing protein ST1585|Sulfurisphaera tokodaii (strain

Query: 1 DLLTLAHLHV 10
D + L HLH+
Sbjct: 52 DYIVLTHLHI 61


>sp|G3P_METKA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 4 TLAHLHV 10
TL H+HV
Sbjct: 225 TLMHMHV 231


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DLLTLAHL 8
DL+T+AH+
Sbjct: 463 DLVTVAHV 470


>sp|RIBL_THEVO|FAD synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DLLTLAHLH 9
D+L L H+H
Sbjct: 11 DILHLGHIH 19


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 1 DLLTLAHLHV 10
D+L H+H+
Sbjct: 523 DILHTGHIHI 532




190|Sequence|946|955|AHLHVSRATV

>sp|CMR4_SACS2|CRISPR system CMR subunit Cmr4|Saccharolobus solfataricus (strain ATCC

Query: 2 HLHVSRAT 9
HLHVS T
Sbjct: 20 HLHVSSGT 27


>sp|Y453_METS3|PUTATIVE HTH-type transcriptional regulatory protein|Methanobrevibacter

Query: 4 HVSRATV 10
HVSRAT+
Sbjct: 150 HVSRATM 156


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 3 LHVSRATV 10
LH S+ATV
Sbjct: 365 LHTSKATV 372


>sp|Y2347_METMJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanoculleus

Query: 1 AHLHVSRATV 10
+HL VSR T+
Sbjct: 148 SHLGVSRRTI 157


>sp|KAE1_THEPD|TRNA N6-adenosine threonylcarbamoyltransferase|Thermofilum pendens

Query: 1 AHLHVSRAT 9
AHL +SR T
Sbjct: 118 AHLEISRLT 126


>sp|FRHG_METVO|COENZYME F420 hydrogenase subunit gamma|Methanococcus voltae

Query: 1 AHLHVSRAT 9
AH+H+S T
Sbjct: 5 AHIHMSGCT 13




191|Sequence|951|960|SRATVPLQSN

***** No hits found ******


192|Sequence|956|965|PLQSNVIEAA

>sp|ENDA_NATPD|TRNA-SPLICING endonuclease|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PLQSNVIEAA 10
PLQ +++EAA
Sbjct: 203 PLQLSLLEAA 212


>sp|ENDA_HALVD|TRNA-SPLICING endonuclease|Haloferax volcanii (strain ATCC 29605

Query: 1 PLQSNVIEAA 10
PLQ +++EAA
Sbjct: 208 PLQLSLLEAA 217


>sp|T2M2_METJA|TYPE II restriction enzyme MjaII|Methanocaldococcus jannaschii

Query: 1 PLQSNVIE 8
PL NVIE
Sbjct: 2 PLSKNVIE 9


>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 PLQSNVIEAA 10
PL +N+I AA
Sbjct: 5 PLHANLIPAA 14




193|Sequence|961|970|VIEAAPDMKR

>sp|RNZ_METMP|RIBONUCLEASE Z|Methanococcus maripaludis (strain DSM 14266

Query: 2 IEAAPDMKR 10
IE PD+KR
Sbjct: 167 IEIGPDLKR 175


>sp|RNZ_METM6|RIBONUCLEASE Z|Methanococcus maripaludis (strain C6 /

Query: 2 IEAAPDMKR 10
IE PD+KR
Sbjct: 167 IEIGPDLKR 175


>sp|RNZ_METM5|RIBONUCLEASE Z|Methanococcus maripaludis (strain C5 /

Query: 2 IEAAPDMKR 10
IE PD+KR
Sbjct: 167 IEIGPDLKR 175


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 1 VIEAAPDMKR 10
IE PDM+R
Sbjct: 374 TIEDTPDMRR 383


>sp|RNZ_METM7|RIBONUCLEASE Z|Methanococcus maripaludis (strain C7 /

Query: 2 IEAAPDMKR 10
IE PD+KR
Sbjct: 167 IEIGPDLKR 175


>sp|SERA_METTH|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VIEAAPDMK 9
VIEAAP +K
Sbjct: 59 VIEAAPRLK 67


>sp|TRPB_HALSA|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 700922

Query: 2 IEAAPDMK 9
I+AAPDM+
Sbjct: 419 IDAAPDME 426


>sp|TRPB_HALS3|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 29341

Query: 2 IEAAPDMK 9
I+AAPDM+
Sbjct: 419 IDAAPDME 426


>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 1 VIEAAPDM 8
V+E APDM
Sbjct: 223 VLEVAPDM 230


>sp|RL14_METLZ|LARGE ribosomal subunit protein uL14|Methanocorpusculum labreanum

Query: 1 VIEAAPDMKR 10
V + PDMKR
Sbjct: 57 VKKGTPDMKR 66


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 1 VIEAAPDMKR 10
V+E APD R
Sbjct: 444 VLEGAPDAAR 453


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VIEAAPDMKR 10
V+EA P+M R
Sbjct: 355 VLEALPEMPR 364


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM

Query: 1 VIEAAPDM 8
V+E APD+
Sbjct: 22 VVEVAPDL 29


>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VIEAAPDM 8
V+EA PD+
Sbjct: 148 VVEAGPDV 155


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IEAAPDMK 9
+EA PD+K
Sbjct: 91 VEALPDLK 98




194|Sequence|966|975|PDMKRESEKE

>sp|MFNE_METJA|[5-(AMINOMETHYL)FURAN-3-YL]METHYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DMKRESEKE 10
D+KRE EKE
Sbjct: 88 DLKREIEKE 96


>sp|PSB1_KORCO|PROTEASOME subunit beta 1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PDMKRES 7
PDM RES
Sbjct: 150 PDMDRES 156


>sp|FEN_METST|FLAP endonuclease 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PDMKRESEKE 10
PD+K+E+++E
Sbjct: 84 PDLKKETQEE 93


>sp|PRIS_METAC|DNA primase small subunit PriS|Methanosarcina acetivorans (strain ATCC

Query: 3 MKRESEKE 10
MKRESEK+
Sbjct: 232 MKRESEKK 239


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 DMKRESE 8
D+KRESE
Sbjct: 338 DLKRESE 344


>sp|RRP4_METTH|EXOSOME complex component Rrp4|Methanothermobacter thermautotrophicus

Query: 1 PDMKRESEK 9
PDM+R +EK
Sbjct: 187 PDMERIAEK 195


>sp|XERA_METTH|TYROSINE recombinase XerA|Methanothermobacter thermautotrophicus (strain

Query: 2 DMKRESE 8
+MKRESE
Sbjct: 6 NMKRESE 12




195|Sequence|971|980|ESEKEWYFGN

>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 ESEKEWYFG 9
E KEW+FG
Sbjct: 386 EENKEWFFG 394


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 ESEKEWYFG 9
E KEW+FG
Sbjct: 386 EENKEWFFG 394


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 ESEKEWYFG 9
E K+W+FG
Sbjct: 386 EENKDWFFG 394


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 3 EKEWYF 8
EKEW+F
Sbjct: 115 EKEWHF 120


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 ESEKEWYFGN 10
E WYFG+
Sbjct: 104 EDLDSWYFGD 113


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 ESEKEWYF 8
++EKEW F
Sbjct: 153 DTEKEWGF 160


>sp|AMPP1_ARCFU|AMP phosphorylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SEKEWYFGN 10
+EKEW N
Sbjct: 470 AEKEWKLDN 478


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 ESEKEWYF 8
++EKEW F
Sbjct: 153 DTEKEWGF 160


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 ESEKEWYF 8
++EKEW F
Sbjct: 153 DTEKEWGF 160


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 ESEKEWYF 8
++EKEW F
Sbjct: 153 DTEKEWGF 160


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 ESEKEWYF 8
++EKEW F
Sbjct: 153 DTEKEWGF 160


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 ESEKEWYF 8
++EKEW F
Sbjct: 153 DTEKEWGF 160


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 ESEKEWYF 8
++EKEW F
Sbjct: 153 DTEKEWGF 160


>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 ESEKEW 6
E+EKEW
Sbjct: 545 EAEKEW 550


>sp|GUAAB_SULTO|GMP synthase [glutamine-hydrolyzing] subunit B|Sulfurisphaera tokodaii

Query: 1 ESEKEWYF 8
++EKEW F
Sbjct: 152 DTEKEWGF 159


>sp|RL4_NANEQ|LARGE ribosomal subunit protein uL4|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ESEKEWY 7
++EK+WY
Sbjct: 110 KAEKDWY 116


>sp|FOLD_PYRIL|BIFUNCTIONAL protein FolD|Pyrobaculum islandicum (strain DSM 4184

Query: 4 KEWYF 8
K+WYF
Sbjct: 255 KKWYF 259


>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SEKEWYFGN 10
++ +W+FG+
Sbjct: 186 TDHDWHFGH 194


>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SEKEWYFGN 10
+EKEW N
Sbjct: 469 AEKEWKLDN 477


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EWYFGN 10
E+YFGN
Sbjct: 195 EFYFGN 200


>sp|FER2_THEAC|PROBABLE ferredoxin TA0517|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 EWYFGN 10
EW+ GN
Sbjct: 64 EWFHGN 69


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SEKEWYFGN 10
SEK W+F N
Sbjct: 512 SEKIWHFLN 520


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EWYFG 9
+WYFG
Sbjct: 171 DWYFG 175


>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KEWYFG 9
KEW FG
Sbjct: 146 KEWIFG 151




196|Sequence|976|985|WYFGNADKER

>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YFGNADKER 10
YFG+ D+ER
Sbjct: 133 YFGSFDRER 141


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 YFGNADKER 10
YFG D+ER
Sbjct: 135 YFGGFDRER 143


>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WYFGNAD 7
W+FG+AD
Sbjct: 190 WHFGHAD 196


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 2 YFGNADKE 9
YFG+ D+E
Sbjct: 125 YFGDFDRE 132


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 2 YFGNADKE 9
YFG+ D+E
Sbjct: 123 YFGDFDRE 130


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 3 FGNADKER 10
FG ADK R
Sbjct: 289 FGTADKAR 296


>sp|TRM56_SACS2|TRNA (cytidine(56)-2'-O)-methyltransferase|Saccharolobus solfataricus

Query: 1 WYFGNAD 7
WY+ NAD
Sbjct: 101 WYYHNAD 107


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 3 FGNADKER 10
FGN DKE+
Sbjct: 95 FGNFDKEK 102


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 YFGNADKE 9
YFG D+E
Sbjct: 507 YFGPVDRE 514


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 WYFGNADKE 9
W++ NA+KE
Sbjct: 1081 WFYFNAEKE 1089


>sp|PYRG_METLZ|CTP synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 WYFGNAD 7
W +GN D
Sbjct: 168 WEYGNGD 174


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YFGNADKER 10
YF DKER
Sbjct: 29 YFWTQDKER 37


>sp|Y1407_ARCFU|UNCHARACTERIZED protein AF_1407|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YFGNADKER 10
YF +A KER
Sbjct: 87 YFNSAPKER 95


>sp|ARGDC_CALMQ|ARGININE decarboxylase proenzyme|Caldivirga maquilingensis (strain ATCC

Query: 1 WYFGNADK 8
W FG DK
Sbjct: 63 WRFGGGDK 70


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 YFGNAD 7
YFGN D
Sbjct: 563 YFGNVD 568


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 WYFGNADK 8
W++ NAD+
Sbjct: 615 WHYRNADE 622




197|Sequence|981|990|ADKERSGPYG

>sp|RS11_SACS2|SMALL ribosomal subunit protein uS11|Saccharolobus solfataricus (strain

Query: 1 ADKERSGPY 9
AD+E+S PY
Sbjct: 45 ADREKSSPY 53


>sp|RS11_METKA|SMALL ribosomal subunit protein uS11|Methanopyrus kandleri (strain AV19

Query: 1 ADKERSGPY 9
AD+E S PY
Sbjct: 50 ADREESSPY 58


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DKERSGPY 9
DKER G Y
Sbjct: 99 DKERKGEY 106


>sp|RS11_HYPBU|SMALL ribosomal subunit protein uS11|Hyperthermus butylicus (strain DSM

Query: 1 ADKERSGPY 9
AD+E+ PY
Sbjct: 46 ADREKPSPY 54


>sp|RS11_AERPE|SMALL ribosomal subunit protein uS11|Aeropyrum pernix (strain ATCC

Query: 1 ADKERSGPY 9
AD+E+ PY
Sbjct: 46 ADREKPSPY 54


>sp|Y957_METJA|UNCHARACTERIZED protein MJ0957|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKERSGPYG 10
DK R+G YG
Sbjct: 335 DKVRNGAYG 343


>sp|RS11_STAMF|SMALL ribosomal subunit protein uS11|Staphylothermus marinus (strain

Query: 1 ADKERSGPY 9
AD+E+ PY
Sbjct: 46 ADREKPSPY 54


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DKERSGPY 9
+KERSG Y
Sbjct: 113 EKERSGDY 120


>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DKERSGPY 9
+KERSG Y
Sbjct: 103 NKERSGDY 110


>sp|RS11_SULTO|SMALL ribosomal subunit protein uS11|Sulfurisphaera tokodaii (strain

Query: 1 ADKERSGPY 9
AD+E+ PY
Sbjct: 45 ADREKPSPY 53


>sp|RS11_METS5|SMALL ribosomal subunit protein uS11|Metallosphaera sedula (strain ATCC

Query: 1 ADKERSGPY 9
AD+E+ PY
Sbjct: 45 ADREKPSPY 53


>sp|RS11_SULAC|SMALL ribosomal subunit protein uS11|Sulfolobus acidocaldarius (strain

Query: 1 ADKERSGPY 9
AD+E+ PY
Sbjct: 45 ADREKPSPY 53


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 2 DKERSGPY 9
+KERSG Y
Sbjct: 113 EKERSGDY 120


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DKERSGPY 9
DKER G Y
Sbjct: 99 DKERRGDY 106


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DKERSGPY 9
+KERSG Y
Sbjct: 113 EKERSGDY 120


>sp|RS11_THESM|SMALL ribosomal subunit protein uS11|Thermococcus sibiricus (strain DSM

Query: 1 ADKERSGPY 9
AD++ S PY
Sbjct: 52 ADRDESSPY 60


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM

Query: 4 ERSGPY 9
+RSGPY
Sbjct: 16 KRSGPY 21




198|Sequence|986|995|SGPYGFHEMQ

>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain ATCC

Query: 1 SGPYGFH 7
SGP GFH
Sbjct: 179 SGPPGFH 185


>sp|RS6E_HYPBU|SMALL ribosomal subunit protein eS6|Hyperthermus butylicus (strain DSM

Query: 1 SGPYGFH 7
SGP GFH
Sbjct: 177 SGPPGFH 183


>sp|KDPA_METB6|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Methanoregula boonei (strain DSM

Query: 2 GPYGFHEM 9
GP+GF E+
Sbjct: 468 GPHGFSEI 475


>sp|NAH3_METJA|PROBABLE Na(+)/H(+) antiporter 3|Methanocaldococcus jannaschii (strain

Query: 2 GPYGFHEMQ 10
GPYG + +Q
Sbjct: 41 GPYGLNILQ 49


>sp|RS2_PYRCJ|SMALL ribosomal subunit protein uS2|Pyrobaculum calidifontis (strain

Query: 3 PYGFHEMQ 10
PYGF +Q
Sbjct: 80 PYGFKPVQ 87


>sp|RS2_PYRNV|SMALL ribosomal subunit protein uS2|Pyrobaculum neutrophilum (strain

Query: 3 PYGFHEMQ 10
PYGF +Q
Sbjct: 79 PYGFKPVQ 86


>sp|RS2_PYRIL|SMALL ribosomal subunit protein uS2|Pyrobaculum islandicum (strain DSM

Query: 3 PYGFHEMQ 10
PYGF +Q
Sbjct: 80 PYGFKPVQ 87


>sp|RS2_PYRAE|SMALL ribosomal subunit protein uS2|Pyrobaculum aerophilum (strain ATCC

Query: 3 PYGFHEMQ 10
PYGF +Q
Sbjct: 80 PYGFKPVQ 87


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 SGPYGFHEMQ 10
+GP G HE++
Sbjct: 361 AGPTGGHEIR 370


>sp|CDC6B_HALMA|ORC1-TYPE DNA replication protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 PYGFHEMQ 10
PYG E+Q
Sbjct: 206 PYGTEELQ 213


>sp|RS2_PYRAR|SMALL ribosomal subunit protein uS2|Pyrobaculum arsenaticum (strain DSM

Query: 3 PYGFHEMQ 10
PYGF +Q
Sbjct: 80 PYGFKPVQ 87


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 YGFHEMQ 10
+GFHE++
Sbjct: 507 WGFHELR 513


>sp|RS6E_AERPE|SMALL ribosomal subunit protein eS6|Aeropyrum pernix (strain ATCC 700893

Query: 1 SGPYGFH 7
+GP GFH
Sbjct: 186 AGPPGFH 192


>sp|RNZ_METTH|RIBONUCLEASE Z|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GPYGFHEMQ 10
GP G HE+
Sbjct: 90 GPPGIHELH 98


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPYGFHEM 9
G YGF+++
Sbjct: 753 GDYGFYDL 760


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain

Query: 2 GPYGFHEMQ 10
GPYG+ +
Sbjct: 17 GPYGYRPQE 25




199|Sequence|991|1000|FHEMQELWTK

>sp|Y1673_METJA|UNCHARACTERIZED protein MJ1673|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EMQELWT 9
E+QELW+
Sbjct: 35 ELQELWS 41


>sp|PIMT_METKA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 MQELW 8
MQELW
Sbjct: 188 MQELW 192


>sp|RL5_HALWD|LARGE ribosomal subunit protein uL5|Haloquadratum walsbyi (strain DSM

Query: 1 FHEMQE 6
FHEM+E
Sbjct: 8 FHEMRE 13


>sp|RL5_HALSA|LARGE ribosomal subunit protein uL5|Halobacterium salinarum (strain

Query: 1 FHEMQE 6
FHEM+E
Sbjct: 9 FHEMRE 14


>sp|RL5_HALS3|LARGE ribosomal subunit protein uL5|Halobacterium salinarum (strain

Query: 1 FHEMQE 6
FHEM+E
Sbjct: 9 FHEMRE 14


>sp|RL5_HALMA|LARGE ribosomal subunit protein uL5|Haloarcula marismortui (strain ATCC

Query: 1 FHEMQE 6
FHEM+E
Sbjct: 11 FHEMRE 16


>sp|Y2317_HALSA|PUTATIVE ABC transporter ATP-binding protein|Halobacterium salinarum (strain

Query: 2 HEMQELWT 9
H+++++WT
Sbjct: 191 HDLRDVWT 198


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HEMQELWTK 10
HE++E W K
Sbjct: 8 HEIEEKWQK 16


>sp|QUEE_METKA|7-CARBOXY-7-DEAZAGUANINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 HEMQELW 8
H++++LW
Sbjct: 221 HDLEDLW 227


>sp|GLCS_SACS2|GLUCOSE-BINDING protein GlcS|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HEMQELWTK 10
++ QE+WTK
Sbjct: 392 YQGQEVWTK 400


>sp|RL5_NATPD|LARGE ribosomal subunit protein uL5|Natronomonas pharaonis (strain ATCC

Query: 1 FHEMQE 6
FHEM+E
Sbjct: 10 FHEMRE 15




200|Sequence|996|1005|ELWTKGMLNA

>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ELWTKGML 8
ELW KG++
Sbjct: 385 ELWVKGIV 392


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ELWTKGML 8
ELW KG++
Sbjct: 147 ELWEKGLI 154


>sp|PELO_METS5|PROTEIN pelota homolog|Metallosphaera sedula (strain ATCC 51363

Query: 3 WTKGMLN 9
WTKG+++
Sbjct: 109 WTKGLID 115


>sp|Y1053_ARCFU|UNCHARACTERIZED protein AF_1053|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WTKGML 8
W KGML
Sbjct: 188 WVKGML 193


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ELWTKGML 8
ELW KG++
Sbjct: 158 ELWHKGLV 165


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 1 ELWTKGMLN 9
E+W KG+++
Sbjct: 375 EIWLKGVVD 383


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 5 KGMLNA 10
KGMLNA
Sbjct: 83 KGMLNA 88


>sp|HIS3_IGNH4|PHOSPHORIBOSYL-AMP cyclohydrolase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ELWTKG 6
ELW KG
Sbjct: 66 ELWVKG 71


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 ELWTKGMLN 9
E+W KG+++
Sbjct: 371 EIWLKGVVD 379


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ELWTKGM 7
E WT+GM
Sbjct: 384 EEWTEGM 390


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 2 LWTKGML 8
+WTKG +
Sbjct: 241 IWTKGAI 247


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 2 LWTKGML 8
+WTKG +
Sbjct: 241 IWTKGAI 247


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain NA1)

Query: 2 LWTKGML 8
+WTKG +
Sbjct: 241 IWTKGAI 247


>sp|PANE_ARCFU|2-DEHYDROPANTOATE 2-reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LWTKGMLNA 10
+W K ++NA
Sbjct: 175 IWAKAVVNA 183


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 2 LWTKGML 8
+WTKG +
Sbjct: 241 IWTKGAI 247


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 1 ELWTKGMLN 9
E+W KG+++
Sbjct: 374 EIWLKGVVD 382




201|Sequence|1001|1010|GMLNAKTRCW

>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GMLNAKTRC 9
GML A RC
Sbjct: 125 GMLMAAVRC 133


>sp|KAE1_IGNH4|TRNA N6-adenosine threonylcarbamoyltransferase|Ignicoccus hospitalis

Query: 1 GMLNAKTRCW 10
G+L A R W
Sbjct: 207 GLLTAALRAW 216


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 2 MLNAKTRCW 10
+LN K R W
Sbjct: 605 VLNKKARIW 613




202|Sequence|1006|1015|KTRCWAQGMD

>sp|Y740_ARCFU|PUTATIVE uncharacterized protein AF_0740|Archaeoglobus fulgidus (strain ATCC

Query: 1 KTRCWAQGMD 10
K R WA+G+D
Sbjct: 95 KLRWWAEGVD 104


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KTRCWAQGMD 10
+ R WA+G D
Sbjct: 720 RRRFWAEGFD 729


>sp|LIPA_PYRAR|LIPOYL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RCWAQG 8
RCW +G
Sbjct: 44 RCWGEG 49


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 3 RCWAQG 8
RCWA G
Sbjct: 635 RCWACG 640


>sp|RL3_METH6|LARGE ribosomal subunit protein uL3|Methanothrix harundinacea (strain

Query: 1 KTRCWAQG 8
+TR WA G
Sbjct: 26 RTRYWAAG 33


>sp|TRPA_METMA|TRYPTOPHAN synthase alpha chain|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KTRCWAQGMD 10
KT C A G+D
Sbjct: 147 KTGCDAHGLD 156


>sp|KTHY_THESM|PROBABLE thymidylate kinase|Thermococcus sibiricus (strain DSM 12597

Query: 5 WAQGMD 10
WA+G+D
Sbjct: 111 WARGLD 116


>sp|KTHY_THEON|PROBABLE thymidylate kinase|Thermococcus onnurineus (strain NA1)

Query: 5 WAQGMD 10
WA+G+D
Sbjct: 109 WARGLD 114


>sp|KTHY_THEKO|PROBABLE thymidylate kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 WAQGMD 10
WA+G+D
Sbjct: 109 WARGLD 114


>sp|KTHY_THEGJ|PROBABLE thymidylate kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 WAQGMD 10
WA+G+D
Sbjct: 111 WARGLD 116


>sp|KTHY_PYRHO|PROBABLE thymidylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 WAQGMD 10
WA+G+D
Sbjct: 109 WARGLD 114


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CWAQGMD 10
CW G+D
Sbjct: 429 CWLIGLD 435




203|Sequence|1011|1020|AQGMDGWRPL

>sp|Y768_THEKO|UPF0235 protein TK0768|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QGMDGWR 8
+G+DGWR
Sbjct: 27 EGVDGWR 33


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QGMDGWRP 9
+GM+ WRP
Sbjct: 29 KGMNVWRP 36


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 QGMDGWRP 9
+GMDG+ P
Sbjct: 55 RGMDGYEP 62


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DGWRPL 10
D WRPL
Sbjct: 1059 DQWRPL 1064


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 1 AQGMDGWRPL 10
A+G+DG PL
Sbjct: 804 AEGIDGAAPL 813


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 6 GWRPL 10
GWRP+
Sbjct: 142 GWRPI 146


>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 4 MDGWRP 9
+DGW P
Sbjct: 44 IDGWEP 49


>sp|CDC6A_HALSA|ORC1-TYPE DNA replication protein 10|Halobacterium salinarum (strain ATCC

Query: 4 MDGWRP 9
+DGW P
Sbjct: 47 IDGWEP 52


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 5 DGWRP 9
DGW+P
Sbjct: 116 DGWKP 120


>sp|CDC68_HALSA|ORC1-TYPE DNA replication protein 8|Halobacterium salinarum (strain ATCC

Query: 4 MDGWRP 9
+DGW P
Sbjct: 45 VDGWEP 50


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 6 GWRPL 10
GWRP+
Sbjct: 149 GWRPV 153


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GMDGWR 8
G+DGW+
Sbjct: 435 GIDGWQ 440


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 3 GMDGWR 8
G+DGW+
Sbjct: 435 GIDGWQ 440


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 3 GMDGWR 8
G+DGW+
Sbjct: 438 GIDGWQ 443


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GMDGWR 8
G+DGW+
Sbjct: 454 GIDGWQ 459


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 6 GWRPL 10
GW+PL
Sbjct: 759 GWKPL 763


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 QGMDGWR 8
+GMD W+
Sbjct: 354 EGMDSWQ 360


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 4 MDGWRPL 10
+D WRP+
Sbjct: 194 VDDWRPV 200


>sp|MTRE_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus aeolicus (strain ATCC

Query: 4 MDGWRPL 10
+DGWR +
Sbjct: 246 LDGWRSI 252


>sp|MTRE_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 4 MDGWRPL 10
+DGWR +
Sbjct: 246 LDGWRSI 252


>sp|MTRE_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 4 MDGWRPL 10
+DGWR +
Sbjct: 246 LDGWRSI 252


>sp|MTRE_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain C7

Query: 4 MDGWRPL 10
+DGWR +
Sbjct: 246 LDGWRSI 252


>sp|MTRE_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain C5

Query: 4 MDGWRPL 10
+DGWR +
Sbjct: 246 LDGWRSI 252


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AQGMDGW 7
AQG D W
Sbjct: 98 AQGEDAW 104


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GMDGWRPL 10
G+DGW L
Sbjct: 268 GIDGWEWL 275


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 MDGWR 8
+DGWR
Sbjct: 562 LDGWR 566


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 GMDGWRPL 10
G+DGW L
Sbjct: 301 GIDGWEFL 308


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 3 GMDGWRPL 10
G+DGW L
Sbjct: 280 GLDGWEWL 287


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 6 GWRPL 10
GWRPL
Sbjct: 338 GWRPL 342


>sp|PYRF_HALLT|OROTIDINE 5'-phosphate decarboxylase|Halorubrum lacusprofundi (strain ATCC

Query: 5 DGWRPL 10
DGWR L
Sbjct: 69 DGWRAL 74


>sp|MTRE_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 4 MDGWR 8
+DGWR
Sbjct: 246 LDGWR 250


>sp|RS3_METBF|SMALL ribosomal subunit protein uS3|Methanosarcina barkeri (strain Fusaro

Query: 2 QGMDGWRPL 10
+G D W P+
Sbjct: 294 EGYDYWHPM 302


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 3 GMDGW 7
G+DGW
Sbjct: 262 GIDGW 266


>sp|PYRF_NATPD|OROTIDINE 5'-phosphate decarboxylase|Natronomonas pharaonis (strain ATCC

Query: 2 QGMDGWRPL 10
+ DGWR L
Sbjct: 65 EDSDGWRAL 73


>sp|PYRF_HALSA|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 5 DGWRPL 10
DGWR L
Sbjct: 69 DGWRAL 74


>sp|PYRF_HALS3|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 5 DGWRPL 10
DGWR L
Sbjct: 69 DGWRAL 74




204|Sequence|1016|1025|GWRPLQSIPQ

>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 GWRPLQSIPQ 10
GW+PL+ PQ
Sbjct: 759 GWKPLEKYPQ 768


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 1 GWRPLQS 7
GWRP+++
Sbjct: 142 GWRPIEN 148


>sp|THI4_HALSA|THIAMINE thiazole synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 WRPLQSIPQ 10
W P+ S+P+
Sbjct: 153 WTPVHSLPR 161


>sp|THI4_HALS3|THIAMINE thiazole synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 WRPLQSIPQ 10
W P+ S+P+
Sbjct: 153 WTPVHSLPR 161


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GWRPLQSIP 9
GW ++S+P
Sbjct: 1486 GWSKIKSLP 1494


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 1 GWRPLQSIP 9
GW L S+P
Sbjct: 428 GWELLSSLP 436


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GWRPLQ 6
GW+PL+
Sbjct: 518 GWKPLK 523


>sp|IF2G_HALLT|TRANSLATION initiation factor 2 subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 WRPLQS 7
WRPL++
Sbjct: 266 WRPLET 271


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GWRPLQSIPQ 10
GW L+ IP+
Sbjct: 428 GWDLLKDIPE 437


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GWRPLQSIPQ 10
GW L ++P+
Sbjct: 428 GWELLSTLPE 437


>sp|RL2_METB6|LARGE ribosomal subunit protein uL2|Methanoregula boonei (strain DSM

Query: 4 PLQSIP 9
PLQSIP
Sbjct: 95 PLQSIP 100


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GWRPLQSIP 9
GW P S+P
Sbjct: 182 GWCPRHSMP 190


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GWRPLQSIP 9
GW P S+P
Sbjct: 182 GWCPRHSMP 190


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GWRPLQSIP 9
GW P S+P
Sbjct: 182 GWCPRHSMP 190


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 WRPLQSIP 9
W P++ IP
Sbjct: 507 WAPVEGIP 514


>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 WRPLQSIPQ 10
WRPL I +
Sbjct: 18 WRPLDEIAR 26




205|Sequence|1021|1030|QSIPQLKWCL

>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 1 QSIPQLKW 8
+ IPQ KW
Sbjct: 171 RGIPQTKW 178


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 1 QSIPQLKW 8
+ IPQ KW
Sbjct: 175 RGIPQTKW 182


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 1 QSIPQLKW 8
+ IPQ KW
Sbjct: 197 RGIPQTKW 204


>sp|Y1512_SULAC|UPF0173 metal-dependent hydrolase Saci_1512|Sulfolobus acidocaldarius

Query: 3 IPQLKW 8
+PQL+W
Sbjct: 1 MPQLRW 6


>sp|Y1418_SULTO|UPF0173 metal-dependent hydrolase STK_14180|Sulfurisphaera tokodaii

Query: 3 IPQLKW 8
+PQL+W
Sbjct: 1 MPQLRW 6


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 2 SIPQLKWCL 10
S+P+L W L
Sbjct: 267 SVPELPWDL 275


>sp|RS11_METAR|SMALL ribosomal subunit protein uS11|Methanocella arvoryzae (strain DSM

Query: 4 PQLKWCL 10
PQ KW +
Sbjct: 5 PQFKWAI 11


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QSIPQLKWCL 10
++IP+ K+C+
Sbjct: 276 RAIPENKYCI 285


>sp|RL15E_SULAC|LARGE ribosomal subunit protein eL15|Sulfolobus acidocaldarius (strain

Query: 1 QSIPQLKW 8
+S P+LKW
Sbjct: 141 RSDPELKW 148




206|Sequence|1026|1035|LKWCLLASGQ

>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LKWCLLASGQ 10
+ W LLA+G+
Sbjct: 168 MAWALLAAGR 177


>sp|TRUA_PYRNV|TRNA pseudouridine synthase A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LKWCLLASGQ 10
L W +LA+G+
Sbjct: 167 LAWAILAAGR 176


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LKWCLLASGQ 10
L W +LA+G+
Sbjct: 167 LAWAILAAGR 176


>sp|TRUA_PYRAR|TRNA pseudouridine synthase A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LKWCLLASGQ 10
+ W +LA+G+
Sbjct: 168 MAWAILATGR 177


>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LKWCLLASGQ 10
+ W +LA+G+
Sbjct: 168 MAWAILAAGR 177




207|Sequence|1031|1040|LASGQAVLNE

>sp|SLAB_METS5|S-LAYER protein B|Metallosphaera sedula (strain ATCC 51363

Query: 2 ASGQAVLN 9
ASGQAVLN
Sbjct: 151 ASGQAVLN 158


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 1 LASGQAVLN 9
LA+GQ +LN
Sbjct: 551 LATGQTLLN 559


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LASGQAVLN 9
LA+GQ +LN
Sbjct: 551 LATGQTLLN 559


>sp|ARGC_ARCFU|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ASGQAVLN 9
ASGQAV N
Sbjct: 305 ASGQAVQN 312


>sp|ARGC_METTH|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 307 ASGQAIQN 314


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 315 ASGQAIQN 322


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 312 ASGQAIQN 319


>sp|ARGC_METKA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanopyrus kandleri (strain AV19 /

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 316 ASGQAIQN 323


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 314 ASGQAIQN 321


>sp|ARGC_METM5|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C5 /

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 316 ASGQAIQN 323


>sp|ARGC_METAR|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 307 ASGQAIQN 314


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 309 ASGQAIQN 316


>sp|ARGC_METTP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 314 ASGQAIQN 321


>sp|ARGC_METMP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 316 ASGQAIQN 323


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 310 ASGQAIQN 317


>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 316 ASGQAIQN 323


>sp|ARGC_METM6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C6 /

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 316 ASGQAIQN 323


>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 301 ASGQAIQN 308


>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 315 ASGQAIQN 322


>sp|ARGC_METPE|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 301 ASGQAIQN 308


>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 313 ASGQAIQN 320


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ASGQAVLN 9
ASGQA+ N
Sbjct: 301 ASGQAIQN 308




208|Sequence|1036|1045|AVLNETDLAT

>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 NETDLAT 10
NETDLA+
Sbjct: 651 NETDLAS 657


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 1 AVLNETDLAT 10
AVL+ET++AT
Sbjct: 238 AVLSETNVAT 247


>sp|CAS7_HALVD|CRISPR-ASSOCIATED protein Cas7|Haloferax volcanii (strain ATCC 29605

Query: 2 VLNETDLA 9
VLNE DLA
Sbjct: 333 VLNERDLA 340


>sp|UREG_NATPD|UREASE accessory protein UreG|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VLNETDLA 9
V+N+TDLA
Sbjct: 151 VVNKTDLA 158


>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 2 VLNETDLA 9
V+N+TDLA
Sbjct: 153 VVNKTDLA 160




209|Sequence|1041|1050|TDLATLILNM

>sp|ASSY_THEAC|ARGININOSUCCINATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DLATLILNM 10
D+ATL LN+
Sbjct: 28 DVATLTLNV 36




210|Sequence|1046|1055|LILNMLITMC

***** No hits found ******


211|Sequence|1051|1060|LITMCGYFPS

>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 2 ITMCGYFP 9
ITMCGY P
Sbjct: 232 ITMCGYGP 239


>sp|Y697_METVS|MEMO1 family protein Mevan_0697|Methanococcus vannielii (strain ATCC

Query: 2 ITMCGYFP 9
+TMCGY P
Sbjct: 234 VTMCGYGP 241


>sp|Y1286_METM6|MEMO1 family protein MmarC6_1286|Methanococcus maripaludis (strain C6 /

Query: 2 ITMCGYFP 9
I+MCGY P
Sbjct: 234 ISMCGYGP 241


>sp|Y191_METM5|MEMO1 family protein MmarC5_0191|Methanococcus maripaludis (strain C5 /

Query: 2 ITMCGYFP 9
I+MCGY P
Sbjct: 234 ISMCGYGP 241


>sp|Y632_METM7|MEMO1 family protein MmarC7_0632|Methanococcus maripaludis (strain C7 /

Query: 2 ITMCGYFP 9
I+MCGY P
Sbjct: 234 ISMCGYGP 241


>sp|Y1387_METMP|MEMO1 family protein MMP1387|Methanococcus maripaludis (strain DSM 14266

Query: 2 ITMCGYFP 9
I+MCGY P
Sbjct: 234 ISMCGYGP 241


>sp|Y403_METJA|MEMO1 family protein MJ0403|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ITMCGYFP 9
I+MCGY P
Sbjct: 237 ISMCGYGP 244


>sp|Y045_METTH|MEMO1 family protein MTH_45|Methanothermobacter thermautotrophicus

Query: 3 TMCGYFP 9
TMCGY P
Sbjct: 230 TMCGYGP 236


>sp|Y3410_METJA|UNCHARACTERIZED protein MJECS10|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CGYFP 9
CGYFP
Sbjct: 281 CGYFP 285


>sp|Y739_SACI1|MEMO1 family protein YN1551_0739|Saccharolobus islandicus (strain

Query: 2 ITMCGYFP 9
+T+CGY P
Sbjct: 234 VTLCGYGP 241


>sp|Y2219_SACI2|MEMO1 family protein LS215_2219|Saccharolobus islandicus (strain L.S.2.15

Query: 2 ITMCGYFP 9
+T+CGY P
Sbjct: 234 VTLCGYGP 241


>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 2 ITMCGYFP 9
+T+CGY P
Sbjct: 234 VTLCGYGP 241


>sp|Y2134_SACI3|MEMO1 family protein M1627_2134|Saccharolobus islandicus (strain M.16.27)

Query: 2 ITMCGYFP 9
+T+CGY P
Sbjct: 234 VTLCGYGP 241


>sp|Y2061_SACI6|MEMO1 family protein M164_2061|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ITMCGYFP 9
+T+CGY P
Sbjct: 234 VTLCGYGP 241


>sp|Y2054_SACI4|MEMO1 family protein M1425_2054|Saccharolobus islandicus (strain M.14.25

Query: 2 ITMCGYFP 9
+T+CGY P
Sbjct: 234 VTLCGYGP 241


>sp|Y066_SACS2|MEMO1 family protein SSO0066|Saccharolobus solfataricus (strain ATCC

Query: 2 ITMCGYFP 9
+T+CGY P
Sbjct: 234 VTLCGYGP 241


>sp|Y2139_METS5|MEMO1 family protein Msed_2139|Metallosphaera sedula (strain ATCC 51363

Query: 2 ITMCGYFP 9
+T+CGY P
Sbjct: 232 VTVCGYAP 239


>sp|Y2394_METBU|MEMO1 family protein Mbur_2394|Methanococcoides burtonii (strain DSM 6242

Query: 2 ITMCGYFP 9
IT CGY P
Sbjct: 215 ITACGYGP 222


>sp|CBIA_METTH|COBYRINATE a,c-diamide synthase|Methanothermobacter thermautotrophicus (strain

Query: 4 MCGYFP 9
MCG FP
Sbjct: 344 MCGVFP 349


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 4 MCGYFP 9
MCGY P
Sbjct: 312 MCGYTP 317


>sp|Y089_SULAC|MEMO1 family protein Saci_0089|Sulfolobus acidocaldarius (strain ATCC

Query: 2 ITMCGYFP 9
+T CGY P
Sbjct: 234 VTACGYGP 241


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 MCGYFP 9
MCGY P
Sbjct: 323 MCGYSP 328


>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC

Query: 3 TMCGY 7
TMCGY
Sbjct: 60 TMCGY 64


>sp|SERK_DESA1|ATP-DEPENDENT L-serine kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 ITMCGYFPS 10
I+MC Y P+
Sbjct: 130 ISMCNYDPN 138


>sp|CDPAS_PYRAE|CDP-ARCHAEOL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 TMCGYFPS 10
T+ GYFP+
Sbjct: 62 TVLGYFPN 69




212|Sequence|1056|1065|GYFPSRDQDN

>sp|Y1679_METJA|UNCHARACTERIZED protein MJ1679|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYFPSRDQ 8
GYF SRD+
Sbjct: 25 GYFSSRDE 32


>sp|RS4_THEPD|SMALL ribosomal subunit protein uS4|Thermofilum pendens (strain DSM 2475

Query: 1 GYFPSRDQDN 10
GY SRD++N
Sbjct: 142 GYLVSRDEEN 151


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GYFPSRDQD 9
G+FP+RD +
Sbjct: 195 GFFPARDPE 203


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 1 GYFPSRDQD 9
GYFP+R+ +
Sbjct: 196 GYFPARNPE 204


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 1 GYFPSRDQD 9
G+FP RD +
Sbjct: 206 GFFPGRDPE 214


>sp|Y1507_METJA|UNCHARACTERIZED ABC transporter permease MJ1507|Methanocaldococcus jannaschii

Query: 1 GYFPSR 6
GYFP+R
Sbjct: 380 GYFPAR 385


>sp|CAS1B_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 FPSRDQD 9
FP RDQ+
Sbjct: 172 FPGRDQE 178


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 2 YFPSRDQDN 10
Y+P R QDN
Sbjct: 270 YYPLRPQDN 278


>sp|AROA_METTP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 1 GYFPSRDQDN 10
G FPSR D+
Sbjct: 254 GLFPSRQGDS 263


>sp|SCAF_METJA|DUF35 domain-containing scaffold protein|Methanocaldococcus jannaschii

Query: 2 YFPSRD 7
YFPSR+
Sbjct: 37 YFPSRE 42


>sp|NADE_METJA|NH(3)-DEPENDENT NAD(+) synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYFPSRDQD 9
GY P+R+ D
Sbjct: 101 GYVPTREFD 109


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC

Query: 2 YFPSRD 7
YFP RD
Sbjct: 28 YFPHRD 33


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 2 YFPSRD 7
YFP RD
Sbjct: 28 YFPHRD 33


>sp|Y1870_ARCFU|UNCHARACTERIZED protein AF_1870|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYFPSRD 7
GY PS+D
Sbjct: 31 GYVPSKD 37


>sp|PURP_PYRAE|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum aerophilum (strain ATCC

Query: 1 GYFPSRDQ 8
GYF +RD+
Sbjct: 162 GYFVARDR 169


>sp|HTPX1_METAC|PROTEASE HtpX homolog 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GYFPSRDQDN 10
G F RD DN
Sbjct: 168 GGFGGRDDDN 177


>sp|DNAG_METHJ|DNA primase DnaG|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GYFPSRDQDN 10
Y P ++DN
Sbjct: 338 AYLPDEEEDN 347


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GYFPSRDQD 9
GY+P R D
Sbjct: 91 GYWPERGAD 99




213|Sequence|1061|1070|RDQDNAIIRP

>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 3 QDNAIIRP 10
+DN +IRP
Sbjct: 354 EDNRLIRP 361


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 2 DQDNAIIRP 10
DQD I+RP
Sbjct: 555 DQDPDILRP 563




214|Sequence|1066|1075|AIIRPLPKVK

>sp|PYRB_PYRAR|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum arsenaticum

Query: 1 AIIRPLPKV 9
AI+ PLP+V
Sbjct: 260 AILHPLPRV 268


>sp|PYRB_METHJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanospirillum hungatei

Query: 1 AIIRPLPKV 9
AI+ PLP+V
Sbjct: 255 AILHPLPRV 263


>sp|PYRB_METS5|ASPARTATE carbamoyltransferase catalytic subunit|Metallosphaera sedula

Query: 1 AIIRPLPKV 9
AI+ PLP+V
Sbjct: 253 AILHPLPRV 261


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 1 AIIRPLP 7
+I+RPLP
Sbjct: 280 SILRPLP 286


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 2 IIRPLPKV 9
I+ PLPK+
Sbjct: 265 ILHPLPKI 272


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain DSM

Query: 2 IIRPLPKV 9
I RPLPK+
Sbjct: 234 IARPLPKI 241


>sp|PYRB_PYRNV|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum neutrophilum

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 261 ILHPLPRV 268


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 265 ILHPLPRV 272


>sp|PYRB_PYRAE|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum aerophilum

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 261 ILHPLPRV 268


>sp|PYRB_CALMQ|ASPARTATE carbamoyltransferase catalytic subunit|Caldivirga maquilingensis

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 262 ILHPLPRV 269


>sp|PYRB_SACS2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus solfataricus

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 256 ILHPLPRV 263


>sp|PYRB_SACI7|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 256 ILHPLPRV 263


>sp|PYRB_SACI6|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 256 ILHPLPRV 263


>sp|PYRB_SACI4|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 256 ILHPLPRV 263


>sp|PYRB_SACI2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 256 ILHPLPRV 263


>sp|PYRB_SACI1|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 256 ILHPLPRV 263


>sp|PYRB_SULAC|ASPARTATE carbamoyltransferase catalytic subunit|Sulfolobus acidocaldarius

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 256 ILHPLPRV 263


>sp|PYRB_SACI3|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 256 ILHPLPRV 263


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 AIIRPLPKVK 10
I RPLP+++
Sbjct: 89 GIQRPLPEIR 98


>sp|PYRB_PYRIL|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum islandicum

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 261 ILHPLPRV 268


>sp|PYRB_HYPBU|ASPARTATE carbamoyltransferase catalytic subunit|Hyperthermus butylicus

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 270 ILHPLPRV 277


>sp|GYAR_THEPD|GLYOXYLATE reductase|Thermofilum pendens (strain DSM 2475

Query: 3 IRPLPKVK 10
+RPL KVK
Sbjct: 329 VRPLEKVK 336


>sp|PYRB_KORCO|ASPARTATE carbamoyltransferase catalytic subunit|Korarchaeum cryptofilum

Query: 2 IIRPLPKV 9
I+ PLP+V
Sbjct: 254 ILHPLPRV 261




215|Sequence|1071|1080|LPKVKRLLSD

>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LPKVKRLLSD 10
LPK KRL D
Sbjct: 508 LPKTKRLFYD 517


>sp|MTAP_THEPD|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 3 KVKRLLSD 10
KVKRLL+D
Sbjct: 233 KVKRLLAD 240


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 2 PKVKRLLSD 10
PK+K LLS+
Sbjct: 114 PKLKELLSE 122


>sp|Y2022_ARCFU|UNCHARACTERIZED protein AF_2022|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPKVKRLL 8
LPKVK+LL
Sbjct: 166 LPKVKKLL 173


>sp|MBD_THEAC|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma acidophilum (strain

Query: 4 VKRLLSD 10
VKRL+SD
Sbjct: 280 VKRLISD 286


>sp|AGOG_METKA|N-GLYCOSYLASE/DNA lyase|Methanopyrus kandleri (strain AV19 /

Query: 2 PKVKRLLS 9
P+VKRLL+
Sbjct: 220 PEVKRLLA 227


>sp|Y1642_METM7|UPF0251 protein MmarC7_1642|Methanococcus maripaludis (strain C7 /

Query: 2 PKVKRLLSD 10
PK+ RL+S+
Sbjct: 8 PKIPRLISE 16


>sp|Y272_METM6|UPF0251 protein MmarC6_0272|Methanococcus maripaludis (strain C6 /

Query: 2 PKVKRLLSD 10
PK+ RL+S+
Sbjct: 8 PKIPRLISE 16


>sp|Y986_METM5|UPF0251 protein MmarC5_0986|Methanococcus maripaludis (strain C5 /

Query: 2 PKVKRLLSD 10
PK+ RL+S+
Sbjct: 8 PKIPRLISE 16




216|Sequence|1076|1085|RLLSDSTCLP

>sp|KHSE_PYRHO|HOMOSERINE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RLLSDSTCLP 10
RLL D+ LP
Sbjct: 213 RLLDDNLALP 222


>sp|KHSE_PYRAB|HOMOSERINE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 RLLSDSTCLP 10
RLL D+ LP
Sbjct: 213 RLLDDNLALP 222


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LSDSTCL 9
L+DSTC+
Sbjct: 490 LTDSTCV 496




217|Sequence|1081|1090|STCLPHIIQL

>sp|UDGA_PYRAE|TYPE-4 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CLPHIIQ 9
CLP++IQ
Sbjct: 100 CLPYLIQ 106


>sp|CAS6_PYRHO|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 STCLPHIIQ 9
STC+P I +
Sbjct: 85 STCIPEIAE 93


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 TCLPHI 7
TCLP+I
Sbjct: 30 TCLPYI 35


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 3 CLPHI 7
CLPH+
Sbjct: 76 CLPHV 80


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 3 CLPHI 7
CLPH+
Sbjct: 76 CLPHV 80


>sp|CAS6_PYRFU|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 STCLPHIIQ 9
STC+P I +
Sbjct: 84 STCVPEIAE 92


>sp|AHBD_METBF|ADOMET-DEPENDENT heme synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 STCLPHIIQL 10
+TC PH ++
Sbjct: 221 ATCAPHYFRI 230




218|Sequence|1086|1095|HIIQLLLTFD

>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HIIQLLLTFD 10
++ Q+LLT+D
Sbjct: 104 NVAQILLTYD 113




219|Sequence|1091|1100|LLTFDPILVE

>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 LLTFDPILV 9
+L+ DPILV
Sbjct: 458 ILSIDPILV 466


>sp|Y1246_PYRAB|UNCHARACTERIZED protein PYRAB12460|Pyrococcus abyssi (strain GE5 /

Query: 1 LLTFDPILV 9
+L+FDP +V
Sbjct: 33 VLSFDPFMV 41




220|Sequence|1096|1105|PILVEKVAIL

>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 1 PILVEKVAIL 10
P L EK+A+L
Sbjct: 306 PNLAEKIAVL 315


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 PILVEKVA 8
PI+ EKVA
Sbjct: 93 PIIAEKVA 100




221|Sequence|1101|1110|KVAILLYHIM

>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 2 VAILLYH 8
VAILLYH
Sbjct: 105 VAILLYH 111


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VAILLYHIM 10
+AILLY +M
Sbjct: 492 IAILLYPLM 500


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VAILLYHIM 10
+AILLY +M
Sbjct: 492 IAILLYPLM 500


>sp|DP2S_HALSA|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 2 VAILLYH 8
V++LLYH
Sbjct: 382 VSVLLYH 388


>sp|DP2S_HALS3|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 2 VAILLYH 8
V++LLYH
Sbjct: 382 VSVLLYH 388


>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 AILLYH 8
AILLYH
Sbjct: 96 AILLYH 101


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KVAILLYHIM 10
K AIL YH M
Sbjct: 64 KDAILRYHSM 73




222|Sequence|1106|1115|LYHIMQDNPQ

>sp|HDRB_METKA|COB--COM heterodisulfide reductase subunit B|Methanopyrus kandleri (strain

Query: 3 HIMQDNPQ 10
H++Q+NP+
Sbjct: 92 HLLQENPE 99


>sp|Y2219_SACI2|MEMO1 family protein LS215_2219|Saccharolobus islandicus (strain L.S.2.15

Query: 1 LYHIMQDNP 9
+Y++MQ NP
Sbjct: 177 IYNVMQKNP 185


>sp|Y739_SACI1|MEMO1 family protein YN1551_0739|Saccharolobus islandicus (strain

Query: 1 LYHIMQDNP 9
+Y++MQ NP
Sbjct: 177 IYNVMQKNP 185


>sp|Y2134_SACI3|MEMO1 family protein M1627_2134|Saccharolobus islandicus (strain M.16.27)

Query: 1 LYHIMQDNP 9
+Y++MQ NP
Sbjct: 177 IYNVMQKNP 185


>sp|Y2061_SACI6|MEMO1 family protein M164_2061|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LYHIMQDNP 9
+Y++MQ NP
Sbjct: 177 IYNVMQKNP 185


>sp|Y2054_SACI4|MEMO1 family protein M1425_2054|Saccharolobus islandicus (strain M.14.25

Query: 1 LYHIMQDNP 9
+Y++MQ NP
Sbjct: 177 IYNVMQKNP 185


>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 1 LYHIMQDNP 9
+Y++MQ NP
Sbjct: 177 IYNVMQKNP 185


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 3 HIMQDNPQ 10
HI +DNP
Sbjct: 259 HIKKDNPH 266


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 3 HIMQDNPQ 10
HI+ +NP+
Sbjct: 573 HILNNNPE 580


>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 3 HIMQDN 8
HI+QDN
Sbjct: 95 HILQDN 100


>sp|Y1407_METTH|UPF0147 protein MTH_1407|Methanothermobacter thermautotrophicus (strain

Query: 1 LYHIMQDN 8
L HIM+DN
Sbjct: 31 LRHIMEDN 38


>sp|RL10E_METTH|LARGE ribosomal subunit protein uL16|Methanothermobacter

Query: 2 YHIMQDNP 9
+HI+++NP
Sbjct: 79 HHIVRENP 86


>sp|RL10E_METST|LARGE ribosomal subunit protein uL16|Methanosphaera stadtmanae (strain

Query: 2 YHIMQDNP 9
+HI+++NP
Sbjct: 79 HHIVRENP 86


>sp|RL10E_METKA|LARGE ribosomal subunit protein uL16|Methanopyrus kandleri (strain AV19

Query: 2 YHIMQDNP 9
+H++++NP
Sbjct: 91 HHVLRENP 98


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 HIMQDNP 9
H+ +DNP
Sbjct: 370 HVQRDNP 376


>sp|TSR3_METJA|16S rRNA aminocarboxypropyltransferase|Methanocaldococcus jannaschii

Query: 1 LYHIMQDNPQ 10
+YH Q NP+
Sbjct: 9 IYHANQCNPK 18




223|Sequence|1111|1120|QDNPQLPRLY

>sp|Y1635_METJA|TNPB-LIKE protein MJ1635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QDNPQLPR 8
+DNP+LP+
Sbjct: 56 KDNPKLPK 63


>sp|REG1_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH0045|Pyrococcus horikoshii

Query: 2 DNPQLPRL 9
D+P LPR+
Sbjct: 78 DSPDLPRI 85


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 4 PQLPRLY 10
P LP+LY
Sbjct: 354 PSLPKLY 360


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DNPQLPRLY 10
DNPQ + Y
Sbjct: 226 DNPQTAKYY 234


>sp|FAEHP_METBU|BIFUNCTIONAL enzyme Fae/Hps|Methanococcoides burtonii (strain DSM 6242

Query: 2 DNPQLP 7
DNP LP
Sbjct: 180 DNPNLP 185


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 QDNPQLPRL 9
+D+P+LP L
Sbjct: 355 RDDPRLPTL 363


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 DNPQLP 7
D+PQLP
Sbjct: 362 DDPQLP 367


>sp|RS7_METKA|SMALL ribosomal subunit protein uS7|Methanopyrus kandleri (strain AV19

Query: 1 QDNPQLPRLY 10
+ NP L RLY
Sbjct: 2 EGNPYLDRLY 11


>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QDNPQLPRL 9
+D+P+LP L
Sbjct: 362 RDDPRLPTL 370


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 QDNPQLPRLY 10
QD+P +LY
Sbjct: 648 QDHPNADKLY 657




224|Sequence|1116|1125|LPRLYLSGVF

>sp|PGMI_PYRAE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum aerophilum

Query: 1 LPRLYLSGV 9
+PRLY+SG+
Sbjct: 37 MPRLYISGM 45


>sp|CDPAS_HYPBU|CDP-ARCHAEOL synthase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PRLYLSGVF 10
P+LY +GVF
Sbjct: 77 PKLYAAGVF 85


>sp|HIS7_NATPD|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PRLYLSGVF 10
PR Y G F
Sbjct: 115 PRFYFDGAF 123


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 LPRLYLSGVF 10
L RLYL+GV
Sbjct: 518 LWRLYLNGVL 527


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 LPRLYLSGV 9
+P+LY SGV
Sbjct: 83 VPKLYESGV 91


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 LPRLYLSGV 9
+P+LY SGV
Sbjct: 84 VPKLYESGV 92


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 LPRLYLSGV 9
+P+LY SGV
Sbjct: 84 VPKLYESGV 92


>sp|DGGGP_METTH|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 PRLYLSGVF 10
P LYL G+F
Sbjct: 210 PSLYLLGIF 218


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 LPRLYLSGV 9
+P+LY SGV
Sbjct: 84 VPQLYESGV 92


>sp|Y836_ARCFU|UNCHARACTERIZED protein AF_0836|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPRLYLSGV 9
+P L+LSGV
Sbjct: 88 IPILFLSGV 96


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 1 LPRLYLSGVF 10
+ RLY SG F
Sbjct: 139 IARLYRSGAF 148




225|Sequence|1121|1130|LSGVFFFIMM

>sp|Y1654_ARCFU|UNCHARACTERIZED protein AF_1654|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GVFFFI 8
GVFFFI
Sbjct: 313 GVFFFI 318


>sp|FEN_METPE|FLAP endonuclease 1|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LSGVFF 6
LSGVFF
Sbjct: 59 LSGVFF 64


>sp|SECY_SACS2|PROTEIN translocase subunit SecY|Saccharolobus solfataricus (strain ATCC

Query: 1 LSGVFFF 7
+SGVFFF
Sbjct: 322 VSGVFFF 328




226|Sequence|1126|1135|FFIMMYTGSN

>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FIMMYTGSN 10
FI++ TGSN
Sbjct: 266 FILLNTGSN 274


>sp|Y486_METJA|UNCHARACTERIZED protein MJ0486|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FFIMMYTGSN 10
F+I Y G+N
Sbjct: 98 FYIYFYPGTN 107


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FIMMYTGSN 10
FI+M GSN
Sbjct: 266 FILMNIGSN 274


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FFIMMYTGSN 10
+FI+ Y G N
Sbjct: 555 YFILNYMGRN 564


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FFIMMYTGSN 10
+FI+ Y G N
Sbjct: 555 YFILNYMGRN 564


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FFIMMYTGSN 10
FF+ Y G N
Sbjct: 279 FFLKFYLGEN 288




227|Sequence|1131|1140|YTGSNVLPVA

>sp|CIMA_ARCFU|PUTATIVE (R)-citramalate synthase CimA|Archaeoglobus fulgidus (strain ATCC

Query: 1 YTGSNVLPVA 10
++G NV+P+A
Sbjct: 386 FSGKNVMPMA 395


>sp|AATF_METST|A-TYPE ATP synthase subunit F|Methanosphaera stadtmanae (strain ATCC

Query: 1 YTGSNVLPV 9
YTGS LP+
Sbjct: 66 YTGSKALPM 74


>sp|PYRC_SULTO|DIHYDROOROTASE tokodaii (strain DSM 16993

Query: 1 YTGSNVLPV 9
+ G NVLP+
Sbjct: 367 FDGKNVLPI 375


>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YTGSNVLPVA 10
Y GS + P++
Sbjct: 16 YNGSKITPIS 25


>sp|TRPB1_PYRAB|TRYPTOPHAN synthase beta chain 1|Pyrococcus abyssi (strain GE5 /

Query: 3 GSNVLPV 9
G+NV+PV
Sbjct: 148 GANVIPV 154


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 2 TGSNVLPVA 10
+GSN +P A
Sbjct: 389 SGSNAIPTA 397


>sp|TRPB1_PYRFU|TRYPTOPHAN synthase beta chain 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GSNVLPV 9
G+NV+PV
Sbjct: 148 GANVIPV 154


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 3 GSNVLP 8
GSNVLP
Sbjct: 17 GSNVLP 22


>sp|OTC_AERPE|ORNITHINE carbamoyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YTGSNVLPV 9
Y G V+PV
Sbjct: 37 YAGERVIPV 45


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 1 YTGSNVLPVA 10
Y GSNV VA
Sbjct: 234 YQGSNVAVVA 243


>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 2 TGSNVLPVA 10
+GS VLP A
Sbjct: 390 SGSGVLPTA 398


>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 1 YTGSNVLPV 9
Y GSN++ +
Sbjct: 400 YVGSNIMTI 408


>sp|PSB_METFA|PROTEASOME subunit beta|Methanocaldococcus fervens (strain DSM 4213

Query: 2 TGSNVLPVA 10
TG N+ P+A
Sbjct: 76 TGKNISPLA 84


>sp|CETZ4_HALVD|TUBULIN-LIKE protein CetZ4|Haloferax volcanii (strain ATCC 29605

Query: 2 TGSNVLPV 9
TGS LPV
Sbjct: 111 TGSGALPV 118




228|Sequence|1136|1145|VLPVARFLKY

>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VLPVARFLKY 10
+PVAR L Y
Sbjct: 86 TVPVARVLSY 95


>sp|SYH_PYRAR|HISTIDINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VLPVARFLKY 10
+P+AR L Y
Sbjct: 86 TVPIARVLSY 95




229|Sequence|1141|1150|RFLKYTHTKQ

>sp|CHEF2_HALS3|TAXIS protein CheF2|Halobacterium salinarum (strain ATCC 29341

Query: 3 LKYTHTKQ 10
L+YTH KQ
Sbjct: 204 LQYTHLKQ 211


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 RFLKYTHTK 9
+FL+Y H K
Sbjct: 143 KFLQYVHEK 151


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RFLKYTHTK 9
+FLK+ H+K
Sbjct: 177 QFLKFVHSK 185


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RFLKYTHTK 9
+FL++ H+K
Sbjct: 175 KFLRFVHSK 183


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FLKYTHTK 9
FLK+ H+K
Sbjct: 176 FLKFIHSK 183




230|Sequence|1146|1155|THTKQAFKSE

>sp|Y1322_METST|UPF0280 protein Msp_1322|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 THTKQAFKSE 10
TH K+AF+ E
Sbjct: 235 THVKEAFEIE 244


>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 1 THTKQAFK 8
TH K AFK
Sbjct: 522 THIKDAFK 529




231|Sequence|1151|1160|AFKSEETKGQ

>sp|Y1387_ARCFU|UNCHARACTERIZED protein AF_1387|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AFKSEETKGQ 10
AF SE+ KG+
Sbjct: 26 AFPSEQRKGK 35




232|Sequence|1156|1165|ETKGQDIFQR

>sp|UPPP_METST|UNDECAPRENYL-DIPHOSPHATASE stadtmanae (strain ATCC 43021

Query: 2 TKGQDIFQR 10
T+G DIF+R
Sbjct: 78 TEGVDIFKR 86


>sp|Y2151_THEKO|PUTATIVE transcriptional regulatory protein TK2151|Thermococcus

Query: 3 KGQDIFQ 9
KG+DIFQ
Sbjct: 70 KGEDIFQ 76


>sp|RL6_ARCFU|LARGE ribosomal subunit protein uL6|Archaeoglobus fulgidus (strain ATCC

Query: 1 ETKGQDIFQR 10
E GQDI+ R
Sbjct: 149 EISGQDIYVR 158


>sp|RL14_NITMS|LARGE ribosomal subunit protein uL14|Nitrosopumilus maritimus (strain

Query: 1 ETKGQDI 7
ETKG DI
Sbjct: 111 ETKGTDI 117


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain

Query: 1 ETKGQDIF 8
ET+G+DI+
Sbjct: 31 ETRGRDIW 38


>sp|FRXA_PYRFU|PROTEIN FrxA|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KGQDIFQR 10
KG+DIF++
Sbjct: 59 KGEDIFKK 66


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 ETKGQDIFQ 9
+TKG ++F+
Sbjct: 249 DTKGNEVFR 257




233|Sequence|1161|1170|DIFQRSILGH

>sp|AROE_METTP|SHIKIMATE dehydrogenase (NADP(+))|Methanothrix thermoacetophila (strain DSM

Query: 3 FQRSILGH 10
FQR I GH
Sbjct: 89 FQRGIRGH 96


>sp|Y1118_METJA|UNCHARACTERIZED protein MJ1118|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IFQRSILGH 10
+F+RSI+G+
Sbjct: 9 LFERSIIGN 17


>sp|TRUD_PICTO|PROBABLE tRNA pseudouridine synthase D|Picrophilus torridus (strain ATCC

Query: 3 FQRSILG 9
F+RSILG
Sbjct: 232 FERSILG 238


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DIFQRSILGH 10
+I +RSIL H
Sbjct: 118 NIHERSILDH 127


>sp|TRUD_THEAC|PROBABLE tRNA pseudouridine synthase D|Thermoplasma acidophilum (strain ATCC

Query: 3 FQRSILGH 10
F+RSI+G+
Sbjct: 220 FERSIIGY 227


>sp|GGPS_SULAC|GERANYLGERANYL diphosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DIFQRSIL 8
DIF RSI+
Sbjct: 138 DIFTRSII 145


>sp|CBIM1_METLZ|PUTATIVE cobalt transport protein CbiM|Methanocorpusculum labreanum (strain

Query: 2 IFQRSILGH 10
+FQ +LGH
Sbjct: 94 VFQALLLGH 102


>sp|Y011_PYRAR|PROTEIN Pars_0011|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DIFQRSILG 9
+++QR +LG
Sbjct: 198 EVYQRDLLG 206


>sp|COFH_METAR|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocella arvoryzae (strain DSM

Query: 1 DIFQRSILG 9
DI++RS+ G
Sbjct: 4 DIYERSLSG 12


>sp|Y3411_METJA|UPF0304 protein MJECS11|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIFQRSILGH 10
+IF ILGH
Sbjct: 38 EIFYDEILGH 47




234|Sequence|1166|1175|SILGHILPEA

>sp|TPIS_METMJ|TRIOSEPHOSPHATE isomerase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 GHILPEA 10
GHILPEA
Sbjct: 74 GHILPEA 80


>sp|TPIS_PYRHO|TRIOSEPHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GHILPEA 10
GH+LPEA
Sbjct: 76 GHVLPEA 82


>sp|TPIS_PYRAB|TRIOSEPHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 4 GHILPEA 10
GH+LPEA
Sbjct: 76 GHVLPEA 82


>sp|TPIS_PYRWO|TRIOSEPHOSPHATE isomerase|Pyrococcus woesei

Query: 4 GHILPEA 10
GH+LPEA
Sbjct: 77 GHVLPEA 83


>sp|TPIS_PYRFU|TRIOSEPHOSPHATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GHILPEA 10
GH+LPEA
Sbjct: 77 GHVLPEA 83


>sp|TPIS_THEKO|TRIOSEPHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GHILPEA 10
GH+LPEA
Sbjct: 77 GHVLPEA 83


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ILGHILPEA 10
++GHI PEA
Sbjct: 508 MIGHIAPEA 516


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 1 SILGHILPE 9
S+LGH+L E
Sbjct: 452 SLLGHLLEE 460


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SILGHILPE 9
S+LGH+L E
Sbjct: 452 SLLGHLLEE 460


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 475 MIGHVAPEA 483


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 479 MVGHVAPEA 487


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LGHILPEA 10
+GHI PEA
Sbjct: 474 IGHISPEA 481


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ILGHILPE 9
+LGH LPE
Sbjct: 62 LLGHSLPE 69


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LGHILPEA 10
+GHI PEA
Sbjct: 472 IGHIAPEA 479


>sp|DTDA_PYRNV|D-AMINOACYL-TRNA deacylase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 LGHILPE 9
LGHILP+
Sbjct: 193 LGHILPK 199


>sp|ILVD_METVS|DIHYDROXY-ACID dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LGHILPEA 10
+GHI PEA
Sbjct: 474 IGHISPEA 481


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LGHILPEA 10
+GHI PEA
Sbjct: 478 IGHISPEA 485


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 480 MVGHVAPEA 488


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 481 MVGHVAPEA 489


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LGHILPEA 10
+GHI PEA
Sbjct: 474 IGHISPEA 481


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 481 MVGHVAPEA 489


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 481 MVGHVAPEA 489


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 481 MVGHVAPEA 489


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 479 MVGHVAPEA 487


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 479 MVGHVAPEA 487


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 479 MVGHVAPEA 487


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LGHILPEA 10
+GHI PEA
Sbjct: 478 IGHISPEA 485


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 475 IGHVAPEA 482


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 480 MVGHVAPEA 488


>sp|DTDA_PYRHO|D-AMINOACYL-TRNA deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LGHILPE 9
GHILP+
Sbjct: 215 FGHILPK 221


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 479 MVGHVAPEA 487


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 479 MVGHVAPEA 487


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 479 MVGHVAPEA 487


>sp|DTDA_PYRAB|D-AMINOACYL-TRNA deacylase|Pyrococcus abyssi (strain GE5 /

Query: 3 LGHILPE 9
GHILP+
Sbjct: 213 FGHILPK 219


>sp|Y3411_METJA|UPF0304 protein MJECS11|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILGHI---LPEA 10
ILGHI LPE+
Sbjct: 44 ILGHIFDELPES 55


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 472 IGHVAPEA 479


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 481 MVGHVSPEA 489


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 494 IGHVAPEA 501


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ILGHILPEA 10
++GH+ PEA
Sbjct: 482 MVGHVAPEA 490


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 474 IGHVSPEA 481


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SILGHILPE 9
SILGH P+
Sbjct: 58 SILGHADPD 66


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 472 IGHVSPEA 479


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 475 IGHVSPEA 482


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 475 IGHVSPEA 482


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ILGHILPE 9
+LGH +PE
Sbjct: 63 LLGHDMPE 70


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 478 IGHVSPEA 485


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 478 IGHVSPEA 485


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 478 IGHVSPEA 485


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 472 IGHVSPEA 479


>sp|DTDA_PICTO|D-AMINOACYL-TRNA deacylase|Picrophilus torridus (strain ATCC 700027

Query: 3 LGHILPE 9
+GHI+P+
Sbjct: 196 IGHIIPK 202


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 475 IGHVSPEA 482


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 474 VGHVSPEA 481


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 474 VGHVSPEA 481


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LGHILPEA 10
+GH+ PEA
Sbjct: 475 VGHVSPEA 482


>sp|DTDA_THEGJ|D-AMINOACYL-TRNA deacylase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LGHILPE 9
GHILP+
Sbjct: 214 FGHILPK 220


>sp|DNLI1_THEPD|DNA ligase 1|Thermofilum pendens (strain DSM 2475

Query: 2 ILGHILPE 9
+ GH+ PE
Sbjct: 46 LAGHVFPE 53


>sp|DTDA_PYRIL|D-AMINOACYL-TRNA deacylase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LGHILPE 9
LGH++P+
Sbjct: 193 LGHVIPK 199


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 2 ILGHILPEA 10
+LGH LP+
Sbjct: 55 VLGHDLPDG 63


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ILGHILPE 9
+LGH LP+
Sbjct: 63 LLGHDLPQ 70


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ILGHILPE 9
+LGH LP+
Sbjct: 63 LLGHDLPQ 70




235|Sequence|1171|1180|ILPEAMVCYL

>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 LPEAMVCY 9
+PEAM C+
Sbjct: 348 MPEAMKCF 355


>sp|MTNA_METJA|PUTATIVE methylthioribose-1-phosphate isomerase|Methanocaldococcus

Query: 1 ILPEAMVCY 9
I+PE + CY
Sbjct: 287 IVPEGVGCY 295


>sp|MTRD_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 2 LPEAMVCYL 10
LP+A+VC L
Sbjct: 200 LPKAVVCSL 208




236|Sequence|1176|1185|MVCYLENYEP

>sp|MPTN_METMP|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 MVCYLENYEP 10
M+ YLENY P
Sbjct: 76 MLKYLENYVP 85


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 MVCYLENYEP 10
++C +EN++P
Sbjct: 230 IICSIENFDP 239


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 1 MVCYLENYEP 10
+VC +EN +P
Sbjct: 228 IVCSMENVDP 237


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 MVCYLENYEP 10
+VC +EN +P
Sbjct: 243 IVCNMENIDP 252


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 MVCYLENYEP 10
+VC +EN +P
Sbjct: 228 IVCNMENIDP 237


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 1 MVCYLENYEP 10
++C +EN +P
Sbjct: 228 IICSMENVDP 237


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 MVCYLENYEP 10
+VC +EN +P
Sbjct: 228 IVCGMENVDP 237


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 VCYLENYEP 10
VC +EN +P
Sbjct: 231 VCNMENLDP 239


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 MVCYLENYEP 10
+VC +EN +P
Sbjct: 227 IVCGMENIDP 236


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 2 VCYLENYEP 10
VC +EN +P
Sbjct: 231 VCNMENLDP 239


>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 CYLENYE 9
C LENY+
Sbjct: 397 CILENYQ 403


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 MVCYLENYEP 10
++C +EN +P
Sbjct: 230 VICNMENIDP 239


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 MVCYLENYEP 10
++C +EN +P
Sbjct: 230 VICNMENIDP 239


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 MVCYLENYEP 10
++C +EN +P
Sbjct: 230 VICNMENIDP 239


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 MVCYLENYEP 10
++C +EN +P
Sbjct: 228 IICGMENVDP 237


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 VCYLENYEP 10
+C +EN +P
Sbjct: 231 ICNMENMDP 239


>sp|CBIJ_METMI|COBALT-PRECORRIN-6A reductase|Methanococcus maripaludis (Methanococcus deltae)

Query: 4 YLENYE 9
Y+ENYE
Sbjct: 111 YVENYE 116


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 2 VCYLENYEP 10
VC +EN +P
Sbjct: 229 VCSMENVDP 237


>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 4 YLENYE 9
YLEN+E
Sbjct: 253 YLENFE 258


>sp|SYS_METST|SERINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 MVCYLENYE 9
+ C LENY+
Sbjct: 391 ICCILENYQ 399


>sp|PGK2_METMP|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 4 YLENYE 9
YLEN+E
Sbjct: 252 YLENFE 257


>sp|PGK2_METM5|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C5 /

Query: 4 YLENYE 9
YLEN+E
Sbjct: 253 YLENFE 258


>sp|PGK2_METM6|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C6 /

Query: 4 YLENYE 9
YLEN+E
Sbjct: 253 YLENFE 258


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 2 VCYLENYEP 10
+C +EN +P
Sbjct: 229 ICGMENVDP 237


>sp|RL10_NATPD|LARGE ribosomal subunit protein uL10|Natronomonas pharaonis (strain

Query: 1 MVCYLENYE 9
+V +LE YE
Sbjct: 22 LVAFLERYE 30


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 MVCYLENYEP 10
++C +EN +P
Sbjct: 229 VLCNMENIDP 238


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LENYEP 10
L+NYEP
Sbjct: 277 LDNYEP 282


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 YLENYEP 10
YLE Y+P
Sbjct: 351 YLEKYDP 357


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 YLENYEP 10
YLE Y+P
Sbjct: 351 YLEKYDP 357


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 4 YLENYEP 10
YLE Y+P
Sbjct: 256 YLEKYKP 262


>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 MVCYLENYE 9
+ C LENY+
Sbjct: 395 LRCILENYQ 403




237|Sequence|1181|1190|ENYEPEKFSE

>sp|TBPD_HALSA|TATA-BOX-BINDING protein D|Halobacterium salinarum (strain ATCC 700922

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 130 YEPEQF 135


>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ENYEPEKFSE 10
E Y P+ FSE
Sbjct: 7 EKYRPKSFSE 16


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NYEPEKFSE 10
+YEPEK E
Sbjct: 366 DYEPEKAEE 374


>sp|TBP2_HALVD|TATA-BOX-BINDING protein 2|Haloferax volcanii (strain ATCC 29605

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 130 YEPEQF 135


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 1 ENYEPEKF 8
E+YEPE F
Sbjct: 429 EDYEPEHF 436


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ENYEPEKFSE 10
E Y P+ FSE
Sbjct: 7 EKYRPKAFSE 16


>sp|TBPF_HALSA|TATA-BOX-BINDING protein F|Halobacterium salinarum (strain ATCC 700922

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 130 YEPEQF 135


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ENYEPEKFS 9
+N+EP+K++
Sbjct: 601 DNFEPDKYT 609


>sp|TBP_PYRNV|TATA-BOX-BINDING protein|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 128 YEPEQF 133


>sp|TBP_PYRAB|TATA-BOX-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 129 YEPEQF 134


>sp|TBP_PYRHO|TATA-BOX-BINDING protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 129 YEPEQF 134


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ENYEPEK 7
E YEP+K
Sbjct: 188 EGYEPDK 194


>sp|TBP_PYRIL|TATA-BOX-BINDING protein|Pyrobaculum islandicum (strain DSM 4184

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 128 YEPEQF 133


>sp|TBPB_HALSA|TATA-BOX-BINDING protein B|Halobacterium salinarum (strain ATCC 700922

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 130 YEPEQF 135


>sp|TBP_PYRAE|TATA-BOX-BINDING protein|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 128 YEPEQF 133


>sp|TBP_PYRWO|TATA-BOX-BINDING protein|Pyrococcus woesei

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 129 YEPEQF 134


>sp|TBP_PYRFU|TATA-BOX-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 129 YEPEQF 134


>sp|TBP_HALMA|TATA-BOX-BINDING protein|Haloarcula marismortui (strain ATCC 43049

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 130 YEPEQF 135


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ENYEPEKFSE 10
+N++PEK+ E
Sbjct: 213 QNFKPEKYYE 222


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ENYEPEKFSE 10
E Y PE+F +
Sbjct: 180 ERYAPEEFKD 189


>sp|RFCS_METMP|REPLICATION factor C small subunit|Methanococcus maripaludis (strain DSM

Query: 1 ENYEPEKFSE 10
E Y PE SE
Sbjct: 7 EKYRPETLSE 16


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENYEPEKFSE 10
++Y P+KF+E
Sbjct: 317 KDYIPKKFAE 326


>sp|TBP2_METMA|TATA-BOX-BINDING protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 128 YEPEQF 133


>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 1 ENYEPEKFSE 10
E Y PE+ E
Sbjct: 251 EKYSPERIQE 260


>sp|Y1493_THEPD|UPF0173 metal-dependent hydrolase Tpen_1493|Thermofilum pendens (strain DSM

Query: 4 EPEKFSE 10
+PEKF E
Sbjct: 200 DPEKFKE 206


>sp|TBP_METS3|TATA-BOX-BINDING protein|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 126 YEPEQF 131


>sp|TBP1_HALVD|TATA-BOX-BINDING protein 1|Haloferax volcanii (strain ATCC 29605

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 130 YEPEQF 135


>sp|TBP1_METMA|TATA-BOX-BINDING protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 128 YEPEQF 133


>sp|TBP1_METAC|TATA-BOX-BINDING protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 128 YEPEQF 133


>sp|TBP_PYRCJ|TATA-BOX-BINDING protein|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 128 YEPEQF 133


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ENYEPEKFSE 10
E Y P+ F+E
Sbjct: 7 EKYRPKSFAE 16


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 YEPEKFS 9
Y+PEKF+
Sbjct: 164 YDPEKFN 170


>sp|TBP_METTH|TATA-BOX-BINDING protein|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 126 YEPEQF 131


>sp|TBP_ARCFU|TATA-BOX-BINDING protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 128 YEPEQF 133


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ENYEPEKFSE 10
E Y P+K SE
Sbjct: 8 EKYRPKKLSE 17


>sp|TBP_THEVO|TATA-BOX-BINDING protein|Thermoplasma volcanium (strain ATCC 51530

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 36 YEPEQF 41


Query: 3 YEPEKF 8
YEPE+F
Sbjct: 129 YEPEQF 134


>sp|TBP_METTP|TATA-BOX-BINDING protein|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 128 YEPEQF 133


>sp|TBP_THEAC|TATA-BOX-BINDING protein|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 36 YEPEQF 41


Query: 3 YEPEKF 8
YEPE+F
Sbjct: 129 YEPEQF 134


>sp|TBP_PICTO|TATA-BOX-BINDING protein|Picrophilus torridus (strain ATCC 700027

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 36 YEPEQF 41


Query: 3 YEPEKF 8
YEPE+F
Sbjct: 129 YEPEQF 134


>sp|TBP_NATPD|TATA-BOX-BINDING protein|Natronomonas pharaonis (strain ATCC 35678

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 130 YEPEQF 135


>sp|TBPC_HALSA|TATA-BOX-BINDING protein C|Halobacterium salinarum (strain ATCC 700922

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 128 YEPEQF 133


>sp|TBP_AERPE|TATA-BOX-BINDING protein|Aeropyrum pernix (strain ATCC 700893

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 143 YEPEQF 148


>sp|TBP_METST|TATA-BOX-BINDING protein|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 126 YEPEQF 131


>sp|TBP_SACS2|TATA-BOX-BINDING protein|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 132 YEPEQF 137


>sp|TBP_PYROC|TATA-BOX-BINDING protein|Pyrodictium occultum

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 141 YEPEQF 146


>sp|TBPE_HALSA|TATA-BOX-BINDING protein E|Halobacterium salinarum (strain ATCC 700922

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 130 YEPEQF 135


>sp|TBP_SACSH|TATA-BOX-BINDING protein|Saccharolobus shibatae (strain ATCC 51178

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 132 YEPEQF 137


>sp|TBP_METVS|TATA-BOX-BINDING protein|Methanococcus vannielii (strain ATCC 35089

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 34 YEPEQF 39


Query: 3 YEPEKF 8
YEPE+F
Sbjct: 124 YEPEQF 129


>sp|RS2_METTP|SMALL ribosomal subunit protein uS2|Methanothrix thermoacetophila

Query: 2 NYEPEK 7
NYEP K
Sbjct: 71 NYEPSK 76


>sp|TBP_METTL|TATA-BOX-BINDING protein|Methanothermococcus thermolithotrophicus

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 34 YEPEQF 39


Query: 3 YEPEKF 8
YEPE+F
Sbjct: 124 YEPEQF 129


>sp|TBP_META3|TATA-BOX-BINDING protein|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 34 YEPEQF 39


Query: 3 YEPEKF 8
YEPE+F
Sbjct: 124 YEPEQF 129


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ENYEPE 6
EN+EPE
Sbjct: 122 ENWEPE 127


>sp|TBP_METMP|TATA-BOX-BINDING protein|Methanococcus maripaludis (strain DSM 14266

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 34 YEPEQF 39


Query: 3 YEPEKF 8
YEPE+F
Sbjct: 124 YEPEQF 129


>sp|TBP_METM6|TATA-BOX-BINDING protein|Methanococcus maripaludis (strain C6 /

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 34 YEPEQF 39


Query: 3 YEPEKF 8
YEPE+F
Sbjct: 124 YEPEQF 129


>sp|RS2_METM7|SMALL ribosomal subunit protein uS2|Methanococcus maripaludis (strain

Query: 2 NYEPE 6
NYEPE
Sbjct: 62 NYEPE 66


>sp|RS2_METM6|SMALL ribosomal subunit protein uS2|Methanococcus maripaludis (strain

Query: 2 NYEPE 6
NYEPE
Sbjct: 62 NYEPE 66


>sp|TBP_SULAC|TATA-BOX-BINDING protein|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 132 YEPEQF 137


>sp|TBP_THEON|TATA-BOX-BINDING protein|Thermococcus onnurineus (strain NA1)

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 129 YEPEQF 134


>sp|TBP_THESM|TATA-BOX-BINDING protein|Thermococcus sibiricus (strain DSM 12597

Query: 3 YEPEKF 8
YEPE+F
Sbjct: 126 YEPEQF 131




238|Sequence|1186|1195|EKFSEIFLGE

>sp|CBIT_SACS2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 EKFSEIFLG 9
EKF IF+G
Sbjct: 110 EKFDRIFIG 118


>sp|CBIT_SACI7|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 EKFSEIFLG 9
EKF IF+G
Sbjct: 110 EKFDRIFIG 118


>sp|CBIT_SACI6|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 EKFSEIFLG 9
EKF IF+G
Sbjct: 110 EKFDRIFIG 118


>sp|CBIT_SACI4|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 EKFSEIFLG 9
EKF IF+G
Sbjct: 110 EKFDRIFIG 118


>sp|CBIT_SACI3|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 EKFSEIFLG 9
EKF IF+G
Sbjct: 110 EKFDRIFIG 118


>sp|CBIT_SACI2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 EKFSEIFLG 9
EKF IF+G
Sbjct: 110 EKFDRIFIG 118


>sp|CBIT_SACI1|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 EKFSEIFLG 9
EKF IF+G
Sbjct: 110 EKFDRIFIG 118


>sp|CDC63_SACS2|ORC1-TYPE DNA replication protein 3|Saccharolobus solfataricus (strain ATCC

Query: 2 KFSEIFLG 9
KFS +FLG
Sbjct: 55 KFSNLFLG 62


>sp|CDC63_SULAC|ORC1-TYPE DNA replication protein 3|Sulfolobus acidocaldarius (strain ATCC

Query: 2 KFSEIFLG 9
KFS +FLG
Sbjct: 54 KFSTLFLG 61


>sp|RSMA_ARCFU|PROBABLE ribosomal RNA small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 EKFSEIFLGE 10
KF+EI +GE
Sbjct: 235 RKFAEIVVGE 244


>sp|THI4_METBU|THIAMINE thiazole synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EKFSEIFL 8
E+FS++FL
Sbjct: 14 EEFSKVFL 21


>sp|CDC63_SULTO|ORC1-TYPE DNA replication protein 3|Sulfurisphaera tokodaii (strain DSM

Query: 2 KFSEIFLG 9
KFS +FLG
Sbjct: 54 KFSTLFLG 61


>sp|DNLI_METBU|DNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EKFSEIFLGE 10
E FSE+ +GE
Sbjct: 494 EVFSELIIGE 503


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EKFSEIFLGE 10
EK+ EIFL +
Sbjct: 90 EKYIEIFLND 99




239|Sequence|1191|1200|IFLGEFDTPE

>sp|Y2143_SULTO|UPF0284 protein STK_21430|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IFLGEFDTPE 10
IF GEFD PE
Sbjct: 5 IFNGEFDIPE 14


>sp|HDRC1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina acetivorans

Query: 2 FLGEFDTPE 10
++ E+DTPE
Sbjct: 10 YVNEYDTPE 18


>sp|Y1081_METJA|UPF0047 protein MJ1081|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IFLGEFDTP 9
IF EFD P
Sbjct: 117 IFFAEFDGP 125


>sp|GCH1L_PYRHO|GTP cyclohydrolase 1 type 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FLGEFDTPE 10
++GEFD P+
Sbjct: 133 YIGEFDEPK 141


>sp|NIKR1_METAC|PUTATIVE nickel-responsive regulator 1|Methanosarcina acetivorans (strain

Query: 1 IFLGEFD 7
I LGEFD
Sbjct: 15 ILLGEFD 21


>sp|TFE_PYRNV|TRANSCRIPTION factor E|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 EFDTPE 10
EFD+PE
Sbjct: 16 EFDSPE 21


>sp|TFE_PYRIL|TRANSCRIPTION factor E|Pyrobaculum islandicum (strain DSM 4184

Query: 5 EFDTPE 10
EFD+PE
Sbjct: 16 EFDSPE 21


>sp|TFE_PYRAR|TRANSCRIPTION factor E|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 EFDTPE 10
EFD+PE
Sbjct: 16 EFDSPE 21


>sp|TFE_PYRAE|TRANSCRIPTION factor E|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 EFDTPE 10
EFD+PE
Sbjct: 16 EFDSPE 21


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IFLGEFDTPE 10
I+ G+++TPE
Sbjct: 270 IWHGDYNTPE 279


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IFLGEFDTP 9
+F G DTP
Sbjct: 155 LFFGNLDTP 163


>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IFLGEFD 7
++LGEFD
Sbjct: 590 LYLGEFD 596


>sp|Y941_METJA|TPR repeat-containing protein MJ0941|Methanocaldococcus jannaschii

Query: 2 FLGEFD 7
FLGE+D
Sbjct: 143 FLGEYD 148


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 GEFDTPE 10
GE+D PE
Sbjct: 278 GEYDVPE 284


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 3 LGEFDTPE 10
+GEF TPE
Sbjct: 14 VGEFLTPE 21


>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 3 LGEFDTPE 10
LG+ D PE
Sbjct: 473 LGDLDVPE 480


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LGEFDTPE 10
L EFD PE
Sbjct: 314 LKEFDEPE 321


>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 2 FLGEFDTPE 10
++GEF+ P+
Sbjct: 133 YIGEFEEPK 141


>sp|RS19_METS5|SMALL ribosomal subunit protein uS19|Metallosphaera sedula (strain ATCC

Query: 2 FLGEFDTP 9
+LGEF P
Sbjct: 109 YLGEFSIP 116


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FLGEFDTP 9
F G+F TP
Sbjct: 511 FTGQFKTP 518


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 FLGEFDTP 9
F G+F TP
Sbjct: 511 FTGQFKTP 518


>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 5 EFDTPE 10
+FDTPE
Sbjct: 37 DFDTPE 42


>sp|RL7A_METS3|LARGE ribosomal subunit protein eL8|Methanobrevibacter smithii (strain

Query: 5 EFDTPE 10
+FDTPE
Sbjct: 8 KFDTPE 13


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 FLGEFDTPE 10
F+ EF+ PE
Sbjct: 35 FIREFNVPE 43


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 1 IFLGEFDTPE 10
+F+G+ ++PE
Sbjct: 412 LFIGKVESPE 421


>sp|Y2094_ARCFU|UNCHARACTERIZED protein AF_2094|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IFLGEFDTPE 10
I +GEFD E
Sbjct: 50 IVIGEFDEEE 59




240|Sequence|1196|1205|FDTPEAIWSS

>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 TPEAIWS 9
TPEAIWS
Sbjct: 384 TPEAIWS 390


>sp|THII_SULAC|PROBABLE tRNA sulfurtransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FDTPEAIW 8
FD+P A W
Sbjct: 177 FDSPVATW 184


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 FDTPEAIWSS 10
+D PE IW +
Sbjct: 276 YDDPEEIWRA 285


>sp|THII_DESA1|TRNA sulfurtransferase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 FDTPEAIW 8
FD+P A W
Sbjct: 183 FDSPVAAW 190


>sp|THII_SULTO|PROBABLE tRNA sulfurtransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FDTPEAIW 8
FD+P A W
Sbjct: 176 FDSPIATW 183


>sp|Y772_ARCFU|UNCHARACTERIZED protein AF_0772|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FDTPEAIWS 9
F TP+ +W+
Sbjct: 6 FITPDGVWT 14


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 TPEAIWS 9
TPE IW+
Sbjct: 17 TPEEIWT 23


>sp|ALF1_THETK|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermoproteus tenax (strain ATCC 35583

Query: 1 FDTPEAIWS 9
FD P +WS
Sbjct: 137 FDLPLVVWS 145


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 TPEAIWS 9
TPE IW+
Sbjct: 17 TPEEIWT 23


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FDTPEAIW 8
FD PE+I+
Sbjct: 153 FDIPESIY 160


>sp|UPPP_METKA|UNDECAPRENYL-DIPHOSPHATASE kandleri (strain AV19 /

Query: 1 FDTPEAIWSS 10
FD EA+W S
Sbjct: 181 FDGGEAVWLS 190


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PEAIW 8
PEAIW
Sbjct: 375 PEAIW 379


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PEAIW 8
PEAIW
Sbjct: 375 PEAIW 379


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PEAIW 8
PEAIW
Sbjct: 375 PEAIW 379


>sp|RS4_METBU|SMALL ribosomal subunit protein uS4|Methanococcoides burtonii (strain

Query: 1 FDTPEAIWSS 10
+DTP+ W +
Sbjct: 11 YDTPQHPWQA 20


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PEAIW 8
PEAIW
Sbjct: 375 PEAIW 379


>sp|TTDB_METJA|PUTATIVE L(+)-tartrate dehydratase subunit beta|Methanocaldococcus

Query: 4 PEAIW 8
PEA+W
Sbjct: 152 PEAVW 156


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 PEAIW 8
PEAIW
Sbjct: 375 PEAIW 379


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 FDTPEAI 7
DTPEAI
Sbjct: 127 LDTPEAI 133


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FDTPEAI 7
DTPEAI
Sbjct: 124 LDTPEAI 130


>sp|GPDA_ARCFU|NADP(+)-DEPENDENT glycerol-3-phosphate dehydrogenase|Archaeoglobus fulgidus (strain

Query: 4 PEAIW 8
PEA+W
Sbjct: 118 PEAVW 122


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DTPEAIW 8
+TPE +W
Sbjct: 482 ETPEILW 488


>sp|RL7A_METS3|LARGE ribosomal subunit protein eL8|Methanobrevibacter smithii (strain

Query: 1 FDTPEAI 7
FDTPE +
Sbjct: 9 FDTPEEL 15


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 PEAIWSS 10
PE +WS+
Sbjct: 559 PERVWSA 565


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 4 PEAIW 8
PEAIW
Sbjct: 378 PEAIW 382


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FDTPEAIW 8
F+ PE +W
Sbjct: 267 FEPPEGVW 274


>sp|METE_SACI6|METHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 TPEAIW 8
TPE +W
Sbjct: 286 TPEKVW 291


>sp|METE_SACI4|METHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 TPEAIW 8
TPE +W
Sbjct: 286 TPEKVW 291


>sp|METE_SACI3|METHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 TPEAIW 8
TPE +W
Sbjct: 286 TPEKVW 291


>sp|METE_SACI2|METHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 TPEAIW 8
TPE +W
Sbjct: 286 TPEKVW 291


>sp|METE_SACI1|METHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 TPEAIW 8
TPE +W
Sbjct: 286 TPEKVW 291


>sp|KAD_HALMA|ADENYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 3 TPEAIWS 9
TP+ +WS
Sbjct: 199 TPDEVWS 205


>sp|COSB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 1 FDTPEAIWSS 10
FDTP+A + +
Sbjct: 126 FDTPDAQYDA 135


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PEAIWS 9
PE +WS
Sbjct: 348 PETVWS 353


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FDTPEAI 7
F TPEA+
Sbjct: 363 FSTPEAV 369




241|Sequence|1201|1210|AIWSSEMRRL

>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IWSSEMRRL 10
IW S+ RR+
Sbjct: 318 IWESDERRI 326


>sp|QUEE_THEAC|7-CARBOXY-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 WSSEMRRL 10
W S++RR+
Sbjct: 174 WGSDIRRI 181


>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain ATCC

Query: 2 IWSSEMRRL 10
+WS +MR +
Sbjct: 211 LWSDDMRHI 219


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IWSSEMRRL 10
+WSSE R+
Sbjct: 312 VWSSEAMRI 320


>sp|CP119_SULAC|CYTOCHROME P450 119|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 WSSEMRR 9
W SEMR+
Sbjct: 4 WFSEMRK 10




242|Sequence|1206|1215|EMRRLMIEKI

>sp|Y1487_ARCFU|UNCHARACTERIZED protein AF_1487|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EMRRLMI 7
+MRRLMI
Sbjct: 3 DMRRLMI 9


>sp|NADA_METJA|QUINOLINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EMRRLMIEKI 10
EM+R+ +EKI
Sbjct: 267 EMKRITLEKI 276


>sp|KADA_SULAC|ADENYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EMRRLMIEK 9
EMR+L +EK
Sbjct: 56 EMRKLSVEK 64


>sp|KADA_SULTO|ADENYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EMRRLMIEK 9
EMR+L +EK
Sbjct: 56 EMRKLPVEK 64


>sp|RL34_META3|LARGE ribosomal subunit protein eL34|Methanococcus aeolicus (strain

Query: 2 MRRLMIEK 9
++RLMIEK
Sbjct: 78 LKRLMIEK 85


>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EMRRLMIEKI 10
EMR L +EKI
Sbjct: 127 EMRELDLEKI 136


>sp|KADA_SACI7|ADENYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EMRRLMIEK 9
E+R+L IEK
Sbjct: 56 EIRKLQIEK 64


>sp|KADA_SACI6|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EMRRLMIEK 9
E+R+L IEK
Sbjct: 56 EIRKLQIEK 64


>sp|KADA_SACI4|ADENYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EMRRLMIEK 9
E+R+L IEK
Sbjct: 56 EIRKLQIEK 64


>sp|KADA_SACI3|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 EMRRLMIEK 9
E+R+L IEK
Sbjct: 56 EIRKLQIEK 64


>sp|KADA_SACI2|ADENYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EMRRLMIEK 9
E+R+L IEK
Sbjct: 56 EIRKLQIEK 64


>sp|KADA_SACI1|ADENYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EMRRLMIEK 9
E+R+L IEK
Sbjct: 56 EIRKLQIEK 64


>sp|KADA_SACS2|ADENYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EMRRLMIEK 9
E+R+L IEK
Sbjct: 56 EIRKLQIEK 64


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 1 EMRRLMIEKI 10
+ RRL++EKI
Sbjct: 370 DQRRLILEKI 379


>sp|NAC_THEVO|NASCENT polypeptide-associated complex protein|Thermoplasma volcanium

Query: 1 EMRRLMIE 8
EMRRLM +
Sbjct: 10 EMRRLMAQ 17


>sp|NAC_THEAC|NASCENT polypeptide-associated complex protein|Thermoplasma acidophilum

Query: 1 EMRRLMIE 8
EMRRLM +
Sbjct: 10 EMRRLMAQ 17


>sp|NADE_PYRFU|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MRRLMIEKI 10
MRRL EK+
Sbjct: 1 MRRLNFEKV 9




243|Sequence|1211|1220|MIEKIAAHLA

>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 2 IEKIAAHLA 10
+EKIAA LA
Sbjct: 223 VEKIAAKLA 231


>sp|THSA_AERPE|THERMOSOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 MIEKIAA 7
M+EKIAA
Sbjct: 281 MVEKIAA 287




244|Sequence|1216|1225|AAHLADFTPR

>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 3 HLADFTPR 10
HL D TPR
Sbjct: 268 HLPDLTPR 275


>sp|FENR_PICTO|FERREDOXIN--NADP reductase|Picrophilus torridus (strain ATCC 700027

Query: 4 LADFTPR 10
+ DFTPR
Sbjct: 117 IGDFTPR 123


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HLADFTP 9
H++D+TP
Sbjct: 580 HISDYTP 586


>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AAHLADFT 8
AAHL+D++
Sbjct: 120 AAHLSDYS 127


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 AHLADFTPR 10
AHL D PR
Sbjct: 212 AHLPDSKPR 220


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AHLADFTP 9
+HL DF P
Sbjct: 584 SHLKDFEP 591


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AHLADFTP 9
+HL DF P
Sbjct: 584 SHLKDFDP 591


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HLADFTPR 10
HL +TPR
Sbjct: 537 HLIHYTPR 544


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AAHLADFTP 9
A HLA F P
Sbjct: 485 ALHLAPFAP 493


>sp|RU1PA_HALXS|RIBULOSE-1-PHOSPHATE aldolase|Halopiger xanaduensis (strain DSM 18323

Query: 1 AAHLADFTP 9
A+ LAD TP
Sbjct: 14 ASELADLTP 22




245|Sequence|1221|1230|DFTPRLQSNT

>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DFTPRLQSNT 10
DF PR +NT
Sbjct: 94 DFHPRFWANT 103


>sp|MCH_METAR|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DFTPRLQSNT 10
DF P++ S+T
Sbjct: 247 DFVPKIPSST 256




246|Sequence|1226|1235|LQSNTRALYQ

>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 5 TRALYQ 10
TRALYQ
Sbjct: 50 TRALYQ 55


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 TRALYQ 10
TRALYQ
Sbjct: 26 TRALYQ 31




247|Sequence|1231|1240|RALYQYCPIP

>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 1 RALYQYCP 8
RAL +YCP
Sbjct: 109 RALARYCP 116


>sp|RFHPS_METJA|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 QYCPIP 10
+YCP+P
Sbjct: 211 KYCPVP 216


>sp|RFHPS_METTH|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanothermobacter thermautotrophicus

Query: 5 QYCPIP 10
+YCP+P
Sbjct: 211 EYCPLP 216


>sp|TFE_SULTO|TRANSCRIPTION factor E|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ALYQYCP 8
+LY YCP
Sbjct: 113 SLYYYCP 119


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain ATCC

Query: 2 ALYQYCPIP 10
A Y YC P
Sbjct: 198 AFYTYCGTP 206


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain C5

Query: 2 ALYQYCPIP 10
A Y YC P
Sbjct: 198 AFYTYCGTP 206


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 2 ALYQYCPIP 10
A Y YC P
Sbjct: 198 AFYTYCGTP 206


>sp|TRUD_META3|PROBABLE tRNA pseudouridine synthase D|Methanococcus aeolicus (strain ATCC

Query: 2 ALYQYCPIP 10
A Y YC P
Sbjct: 207 AFYTYCGAP 215


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LYQYCP 8
LYQY P
Sbjct: 107 LYQYAP 112


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RALYQYCPIP 10
++LY+ P+P
Sbjct: 275 KSLYEEMPVP 284




248|Sequence|1236|1245|YCPIPIINYP

>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 3 PIPIINYP 10
PIP IN+P
Sbjct: 432 PIPAINHP 439


>sp|RFHPS_METJA|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YCPIPI 6
YCP+P+
Sbjct: 212 YCPVPL 217


>sp|RFHPS_METTH|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanothermobacter thermautotrophicus

Query: 1 YCPIPI 6
YCP+P+
Sbjct: 212 YCPLPL 217


>sp|APGM_SACS2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus solfataricus (strain ATCC

Query: 1 YCPIPIIN 8
Y P PIIN
Sbjct: 368 YVPYPIIN 375


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 YCPIPIIN 8
Y P PIIN
Sbjct: 368 YVPYPIIN 375


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YCPIPIIN 8
Y P PIIN
Sbjct: 368 YVPYPIIN 375


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YCPIPIIN 8
Y P PIIN
Sbjct: 368 YVPYPIIN 375


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 YCPIPIIN 8
Y P PIIN
Sbjct: 368 YVPYPIIN 375


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 YCPIPIIN 8
Y P PIIN
Sbjct: 368 YVPYPIIN 375


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 YCPIPIIN 8
Y P PIIN
Sbjct: 368 YVPYPIIN 375


>sp|ENO_SULTO|ENOLASE tokodaii (strain DSM 16993

Query: 1 YCPIPIIN 8
Y PIP++N
Sbjct: 138 YLPIPLLN 145


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 YCPIPIINY 9
Y P+P+++Y
Sbjct: 298 YLPVPLVSY 306


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 YCPIPIINY 9
Y P+P+++Y
Sbjct: 298 YLPVPLVSY 306


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 YCPIPIINY 9
Y P+P+++Y
Sbjct: 298 YLPVPLVSY 306


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 YCPIPIINY 9
Y P+P+++Y
Sbjct: 298 YLPVPLVSY 306


>sp|PROF1_LOKSG|LOKI profilin-1|Lokiarchaeum sp. (strain GC14_75)

Query: 2 CPIPI 6
CPIPI
Sbjct: 96 CPIPI 100


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 YCPIPIINY 9
Y P+P++ Y
Sbjct: 298 YLPVPLVGY 306


>sp|ADHS_METTH|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 CPIPII 7
CP+P++
Sbjct: 193 CPVPVV 198


>sp|ADHS2_ARCFU|PUTATIVE 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase

Query: 2 CPIPII 7
CP+P++
Sbjct: 194 CPVPVV 199


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 YCPIPIINY 9
Y P+P++ Y
Sbjct: 298 YLPVPLVGY 306


>sp|AROC_CALMQ|CHORISMATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 YCPIPIIN 8
+C IP++N
Sbjct: 48 FCHIPVLN 55


>sp|HISX_METMA|HISTIDINOL dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YCPIPIINY 9
Y P+P+ +Y
Sbjct: 353 YAPVPVGDY 361


>sp|HISX_METAC|HISTIDINOL dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YCPIPIINY 9
Y P+P+ +Y
Sbjct: 353 YAPVPVGDY 361


>sp|ADHS_META3|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CPIPII 7
CP PII
Sbjct: 201 CPAPII 206


>sp|Y934_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0934|Methanocaldococcus jannaschii

Query: 1 YCPIPIIN 8
+CPIPII
Sbjct: 108 FCPIPIIK 115


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 3 PIPIIN 8
PIPI+N
Sbjct: 270 PIPILN 275


>sp|ENO_SULAC|ENOLASE acidocaldarius (strain ATCC 33909

Query: 1 YCPIPIIN 8
Y P+P++N
Sbjct: 138 YIPMPLLN 145


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YCPIPIIN 8
+C IP++N
Sbjct: 48 FCHIPVLN 55


>sp|HISX_METBF|HISTIDINOL dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YCPIPIINY 9
Y P+P+ +Y
Sbjct: 353 YSPVPVGDY 361


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YCPIPIIN 8
+C IP++N
Sbjct: 48 FCHIPVLN 55


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YCPIPIIN 8
YC I I+N
Sbjct: 414 YCAIKIVN 421


>sp|Y3061_HALSA|PUTATIVE sulfur carrier protein

Query: 2 CPIPII 7
CP+P++
Sbjct: 18 CPMPVV 23


>sp|HISX_METJA|HISTIDINOL dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YCPIPIINY 9
Y P+P+ +Y
Sbjct: 354 YSPVPVGDY 362


>sp|HISX_METMP|HISTIDINOL dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YCPIPIINY 9
Y P+P+ +Y
Sbjct: 349 YAPVPVGDY 357


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YCPIPIIN 8
+C IP++N
Sbjct: 48 FCHIPVLN 55


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 1 YCPIPIIN 8
+ P+P++N
Sbjct: 118 FSPVPVLN 125


>sp|KADA_THEVO|ADENYLATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 IPIINY 9
IP++NY
Sbjct: 26 IPVVNY 31


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YCPIPIIN 8
YCP ++N
Sbjct: 262 YCPKGVVN 269


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 CPIPIINYP 10
C P++ YP
Sbjct: 395 CDTPLLYYP 403


>sp|Y990_METJA|PUTATIVE sulfur carrier protein MJ0990|Methanocaldococcus jannaschii

Query: 2 CPIPII 7
CP+P++
Sbjct: 15 CPVPVL 20


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 YCPIPIIN 8
YC + I+N
Sbjct: 414 YCAVKIVN 421


>sp|DAPA_METKA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 CPIPIINYP 10
CPI + N P
Sbjct: 132 CPIILYNVP 140


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CPIPII 7
CP PII
Sbjct: 168 CPYPII 173


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 CPIPIINYP 10
C P++ YP
Sbjct: 395 CDTPLLYYP 403




249|Sequence|1241|1250|IINYPQLENE

>sp|PUR1_ARCFU|AMIDOPHOSPHORIBOSYLTRANSFERASE fulgidus (strain ATCC 49558

Query: 1 IINYPQLENE 10
++NY QL NE
Sbjct: 106 LVNYSQLRNE 115


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IINYPQLEN 9
I YP++EN
Sbjct: 253 IFKYPKIEN 261


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IINYPQLEN 9
I+ YP +EN
Sbjct: 247 IVRYPFMEN 255


>sp|COBQ_PICTO|PROBABLE cobyric acid synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 IINYPQLEN 9
I+ YP +EN
Sbjct: 246 IVRYPYMEN 254


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 IINYPQLENE 10
I N P++E+E
Sbjct: 630 IANVPEMEDE 639




250|Sequence|1246|1255|QLENELFCNI

>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 QLENELFCNI 10
+LE ELFC+I
Sbjct: 559 KLEYELFCDI 568


>sp|MFNA_METAC|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina acetivorans

Query: 2 LENELFCNI 10
LENELF +I
Sbjct: 200 LENELFLHI 208


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 2 LENELFCNI 10
LENELF I
Sbjct: 534 LENELFTEI 542


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QLENELFCNI 10
+LE +FC+I
Sbjct: 42 ELERRMFCHI 51


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QLENELFCNI 10
+LE +FC+I
Sbjct: 42 ELERRMFCHI 51


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 QLENELFCNI 10
+LE +FC+I
Sbjct: 42 ELERRMFCHI 51


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QLENELFCNI 10
+LE +FC+I
Sbjct: 42 ELERRMFCHI 51


>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 2 LENELFCNI 10
LENELF ++
Sbjct: 200 LENELFLHV 208


>sp|MFNA_METBF|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina barkeri (strain

Query: 2 LENELFCNI 10
LENELF ++
Sbjct: 200 LENELFLHV 208


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 3 ENELFCN 9
E +LFCN
Sbjct: 23 ETKLFCN 29


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QLENELFCNI 10
+LEN CNI
Sbjct: 281 ELENVELCNI 290


>sp|HEM1_METAC|GLUTAMYL-TRNA reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QLENELFCNI 10
+LEN CNI
Sbjct: 281 ELENVELCNI 290


>sp|HCGF_METMP|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 2 LENELFCNI 10
L+N+L CNI
Sbjct: 93 LKNKLNCNI 101


>sp|HCGF_METM5|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 2 LENELFCNI 10
L+N+L CNI
Sbjct: 93 LKNKLKCNI 101




251|Sequence|1251|1260|LFCNIYYLKQ

>sp|CBID_META3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 FCNIYYLKQ 10
+C IYYLK
Sbjct: 24 YCGIYYLKH 32


>sp|TRM1_META3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus aeolicus

Query: 2 FCNIYYL 8
FC +YYL
Sbjct: 265 FCGLYYL 271


>sp|Y1290_METJA|UNCHARACTERIZED protein MJ1290|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CNIYYLK 9
CNIYY K
Sbjct: 193 CNIYYTK 199


>sp|RRP4_METBF|EXOSOME complex component Rrp4|Methanosarcina barkeri (strain Fusaro /

Query: 1 LFCNIYYLKQ 10
LFC I LK+
Sbjct: 33 LFCGIENLKE 42


>sp|POK_METJA|PANTOATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFCNIYY 7
+ CNIYY
Sbjct: 264 IVCNIYY 270


>sp|Y1159_THEAC|UPF0179 protein Ta1159|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 CNIYYLK 9
CN+YY K
Sbjct: 112 CNLYYFK 118


>sp|CBIM_METST|PUTATIVE cobalt transport protein CbiM|Methanosphaera stadtmanae (strain

Query: 1 LFCNIYYL 8
L+C IYY+
Sbjct: 11 LWCLIYYI 18




252|Sequence|1256|1265|YYLKQLCDTL

>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 3 LKQLCDTL 10
LKQLCD L
Sbjct: 144 LKQLCDKL 151


>sp|Y753_METJA|UNCHARACTERIZED protein MJ0753|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YYLKQLCD 8
Y +KQ+CD
Sbjct: 103 YTIKQVCD 110


>sp|MFNB_METS3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 LKQLCDTL 10
LK+LCD+
Sbjct: 230 LKELCDSF 237


>sp|RL7A_THEVO|LARGE ribosomal subunit protein eL8|Thermoplasma volcanium (strain ATCC

Query: 1 YYLKQLCD 8
YYL LC+
Sbjct: 63 YYLPSLCE 70


>sp|RL7A_THEAC|LARGE ribosomal subunit protein eL8|Thermoplasma acidophilum (strain

Query: 1 YYLKQLCD 8
YYL LC+
Sbjct: 63 YYLPSLCE 70


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 3 LKQLCD 8
L+QLCD
Sbjct: 220 LRQLCD 225


>sp|RL7A_PICTO|LARGE ribosomal subunit protein eL8|Picrophilus torridus (strain ATCC

Query: 1 YYLKQLCD 8
YYL LC+
Sbjct: 62 YYLPTLCE 69


>sp|FTSZ2_ARCFU|CELL division protein FtsZ 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LKQLCDTL 10
+K++CDT+
Sbjct: 171 MKEVCDTV 178


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LKQLCDTL 10
+KQL DTL
Sbjct: 506 IKQLVDTL 513


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LKQLCDTL 10
+KQL DTL
Sbjct: 605 IKQLVDTL 612


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 3 LKQLCDTL 10
+KQL DTL
Sbjct: 552 IKQLVDTL 559




253|Sequence|1261|1270|LCDTLRFPDW

>sp|ACDE_METSH|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanothrix

Query: 1 LCDTLRFPDW 10
L + LRFPDW
Sbjct: 102 LTNFLRFPDW 111


>sp|BACS3_HALMA|SENSORY rhodopsin III|Haloarcula marismortui (strain ATCC 43049

Query: 4 TLRFPDW 10
TLRF DW
Sbjct: 70 TLRFADW 76


>sp|KPRS_METMA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LCDTLRFPD 9
LC+ RFPD
Sbjct: 38 LCEFNRFPD 46


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LCDTLRFPD 9
LC+ RFPD
Sbjct: 26 LCEFNRFPD 34


>sp|BRIX_METAC|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 4 TLRFPDW 10
+LRF DW
Sbjct: 73 SLRFSDW 79


>sp|BRIX_METBF|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 4 TLRFPDW 10
+LRF DW
Sbjct: 73 SLRFTDW 79


>sp|TRPG_METJA|ANTHRANILATE synthase component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DTLRFPD 9
D L+FPD
Sbjct: 177 DNLKFPD 183


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 3 DTLRFPDW 10
D L+FPD+
Sbjct: 140 DPLKFPDF 147


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DTLRFPD 9
DTL FPD
Sbjct: 13 DTLIFPD 19


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 3 DTLRFPDW 10
DT+R DW
Sbjct: 559 DTIRVDDW 566


>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LCDTLRFPDW 10
L +RF DW
Sbjct: 443 LAAMIRFSDW 452


>sp|METK_META3|S-ADENOSYLMETHIONINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CDTLRFP 8
C+T+R P
Sbjct: 102 CETIRLP 108


>sp|Y501_METJA|UNCHARACTERIZED protein MJ0501|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LCDTLRFPDW 10
C T+ P W
Sbjct: 141 FCMTIEIPSW 150


>sp|RS15_NITMS|SMALL ribosomal subunit protein uS15|Nitrosopumilus maritimus (strain

Query: 4 TLRFPDW 10
TLR P W
Sbjct: 19 TLRAPSW 25


>sp|SECD_HALVD|PROTEIN-EXPORT membrane protein SecD|Haloferax volcanii (strain ATCC 29605

Query: 1 LCDTLRFPDW 10
L DT+R +W
Sbjct: 303 LADTMRAGEW 312




254|Sequence|1266|1275|RFPDWPIKDP

>sp|Y148_PYRAR|UPF0215 protein Pars_0148|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FPDWP 6
FPDWP
Sbjct: 107 FPDWP 111


>sp|BACS3_HALMA|SENSORY rhodopsin III|Haloarcula marismortui (strain ATCC 43049

Query: 1 RFPDWPIKDP 10
RF DW + P
Sbjct: 72 RFADWIVSTP 81


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 WPIKDP 10
WP++DP
Sbjct: 193 WPVRDP 198


>sp|AHBB_METBF|SIROHEME decarboxylase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 RFPDWP 6
R+PDWP
Sbjct: 100 RYPDWP 105


>sp|RL10_IGNH4|LARGE ribosomal subunit protein uL10|Ignicoccus hospitalis (strain

Query: 1 RFPDWPIK 8
+FP+W +K
Sbjct: 15 KFPEWKVK 22


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 DWPIKDP 10
D+P KDP
Sbjct: 454 DYPYKDP 460


>sp|FLAB3_METVO|FLAGELLIN B3|Methanococcus voltae

Query: 5 WPIKDP 10
WP +DP
Sbjct: 145 WPFEDP 150


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 1 RFPDWP 6
+ PDWP
Sbjct: 94 KLPDWP 99


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 FPDWPIKD 9
+PD P+KD
Sbjct: 342 YPDNPVKD 349


>sp|AMZA_THEKO|ARCHAEMETZINCIN kodakarensis (strain ATCC BAA-918

Query: 3 PDWPIKD 9
P+W IKD
Sbjct: 13 PEWLIKD 19


>sp|F16PA_HALWD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RFPDWP 6
R P+WP
Sbjct: 194 RVPNWP 199


>sp|Y676_METJA|PUTATIVE hydrogenase expression/formation protein MJ0676|Methanocaldococcus

Query: 1 RFPDWPIKDP 10
R D PI DP
Sbjct: 321 RIVDMPIGDP 330


>sp|RFHPS_ARCFU|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FPDWPI 7
FPDW +
Sbjct: 170 FPDWNV 175


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 FPDWPIKDP 10
+ +WPI+ P
Sbjct: 179 YHEWPIRKP 187


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FPDW 5
FPDW
Sbjct: 50 FPDW 53


>sp|ACDE_METSH|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanothrix

Query: 1 RFPDW 5
RFPDW
Sbjct: 107 RFPDW 111


>sp|Y738_METJA|UNCHARACTERIZED protein MJ0738|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DWPIKDP 10
D+PIKDP
Sbjct: 69 DFPIKDP 75


>sp|RADA_AERPX|DNA repair and recombination protein|Aeropyrum pernix

Query: 4 DWPIKDP 10
+W I+DP
Sbjct: 312 EWGIRDP 318


>sp|RADA_AERPE|DNA repair and recombination protein|Aeropyrum pernix (strain ATCC

Query: 4 DWPIKDP 10
+W I+DP
Sbjct: 312 EWGIRDP 318


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RFPDWPIK 8
RFP+W ++
Sbjct: 266 RFPEWGLR 273


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 4 DWPIKDP 10
+WP+++P
Sbjct: 195 EWPVREP 201


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 4 DWPIKDP 10
+WP+++P
Sbjct: 195 EWPVREP 201


>sp|DYRB_HALVO|DIHYDROFOLATE reductase HdrB|Haloferax volcanii (Halobacterium volcanii)

Query: 1 RFPDW 5
RFP+W
Sbjct: 152 RFPEW 156


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 FPDW 5
FPDW
Sbjct: 427 FPDW 430


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 4 DWPIKDP 10
+WP++ P
Sbjct: 193 EWPVRQP 199


>sp|Y348_THEGJ|UPF0215 protein TGAM_0348|Thermococcus gammatolerans (strain DSM 15229

Query: 2 FPDW 5
FPDW
Sbjct: 124 FPDW 127


>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 RFPDWPI 7
RFPD P+
Sbjct: 39 RFPDHPL 45


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 4 DWPIKDP 10
+WP++ P
Sbjct: 194 EWPVRKP 200


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DWPIKDP 10
DW IK P
Sbjct: 1017 DWEIKTP 1023


>sp|ARSC_HALSA|PUTATIVE arsenate reductase|Halobacterium salinarum (strain ATCC 700922

Query: 4 DWPIKDP 10
DW + DP
Sbjct: 106 DWALDDP 112




255|Sequence|1271|1280|PIKDPVKLLK

>sp|RL40_STAMF|LARGE ribosomal subunit protein eL40|Staphylothermus marinus (strain

Query: 1 PIKDPVKL 8
PI DPVKL
Sbjct: 2 PITDPVKL 9


>sp|SRP54_THEAC|SIGNAL recognition particle 54 kDa|Thermoplasma acidophilum (strain ATCC

Query: 3 KDPVKLLK 10
KDPV+L+K
Sbjct: 162 KDPVRLIK 169


>sp|DNAG_ARCFU|DNA primase DnaG|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIKDPVKLLK 10
P++D VK+LK
Sbjct: 336 PVRDLVKILK 345


>sp|FEN_HYPBU|FLAP endonuclease 1|Hyperthermus butylicus (strain DSM 5456

Query: 3 KDPVKLLK 10
+DPVKLL+
Sbjct: 261 RDPVKLLQ 268


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 3 KDPVKLLK 10
KDPVK++K
Sbjct: 162 KDPVKIIK 169


>sp|RL40_THEPD|LARGE ribosomal subunit protein eL40|Thermofilum pendens (strain DSM

Query: 1 PIKDPVKL 8
PI+DP KL
Sbjct: 2 PIRDPEKL 9


>sp|RL40_SULTO|LARGE ribosomal subunit protein eL40|Sulfurisphaera tokodaii (strain

Query: 1 PIKDPVKL 8
P+ DPVKL
Sbjct: 2 PLTDPVKL 9


>sp|AATF_METVS|A-TYPE ATP synthase subunit F|Methanococcus vannielii (strain ATCC 35089

Query: 3 KDPVKLL 9
KDPVK+L
Sbjct: 83 KDPVKIL 89


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 PIKDPVKL 8
P KDPV L
Sbjct: 126 PAKDPVVL 133


>sp|FAEHP_METTP|BIFUNCTIONAL enzyme Fae/Hps|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IKDPVKLLK 10
++DPV++L+
Sbjct: 286 VRDPVEVLR 294


>sp|TRPF_SULAC|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KDPVKLLK 10
KDP K+LK
Sbjct: 180 KDPSKMLK 187


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PIKDPV 6
P+KDPV
Sbjct: 362 PLKDPV 367


>sp|Y188_METJA|UNCHARACTERIZED protein MJ0188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PIKDPVKLLK 10
+KD +KLLK
Sbjct: 21 TVKDVIKLLK 30




256|Sequence|1276|1285|VKLLKDTLDA

>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 LKDTLDA 10
LKDTLDA
Sbjct: 39 LKDTLDA 45


>sp|Y1064_METJA|UNCHARACTERIZED acetyltransferase MJ1064|Methanocaldococcus jannaschii (strain

Query: 1 VKLLKDTL 8
+KLLK+TL
Sbjct: 4 IKLLKNTL 11


>sp|BGAL_PYRWO|BETA-GALACTOSIDASE woesei

Query: 1 VKLLKDTLD 9
VK+ KDTL+
Sbjct: 111 VKITKDTLE 119


>sp|TFE_METBU|TRANSCRIPTION factor E|Methanococcoides burtonii (strain DSM 6242

Query: 1 VKLLKDTLDA 10
VK L+D LDA
Sbjct: 151 VKKLRDRLDA 160


>sp|MPTA_METMJ|GTP cyclohydrolase MptA|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VKLLKDTLDA 10
+K+LKD++ A
Sbjct: 220 IKILKDSMSA 229


>sp|COFC_HALVD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 VKLLKDTLDA 10
V +L+D LDA
Sbjct: 30 VSMLRDVLDA 39




257|Sequence|1281|1290|DTLDAWKKEV

>sp|KAE1_IGNH4|TRNA N6-adenosine threonylcarbamoyltransferase|Ignicoccus hospitalis

Query: 3 LDAWKKE 9
L AWKKE
Sbjct: 213 LRAWKKE 219


>sp|LIPA_NATPD|LIPOYL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DTLDAWKK 8
DT D WK+
Sbjct: 254 DTFDVWKR 261


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DAWKKE 9
+AWKKE
Sbjct: 485 EAWKKE 490


>sp|RRP41_PYRAR|EXOSOME complex component Rrp41|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 AWKKEV 10
AWK+EV
Sbjct: 204 AWKREV 209


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 4 DAWKKEV 10
D+W+KE+
Sbjct: 539 DSWEKEL 545


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 AWKKE 9
AWKKE
Sbjct: 486 AWKKE 490


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 3 LDAWKKEV 10
LDAW++ V
Sbjct: 272 LDAWREMV 279


>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 2 TLDAWKK 8
TLDA+KK
Sbjct: 355 TLDAFKK 361


>sp|RPO11_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus abyssi (strain GE5 /

Query: 1 DTLDAWKKEV 10
+ LDAW+K +
Sbjct: 84 EVLDAWEKAI 93


>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 2 TLDAWKKEV 10
T+D WK V
Sbjct: 162 TIDEWKDPV 170


>sp|Y007_METJA|PUTATIVE dehydratase subunit MJ0007|Methanocaldococcus jannaschii (strain

Query: 1 DTLDAWKKEV 10
D+L W KEV
Sbjct: 132 DSLKIWIKEV 141


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 TLDAWKKEV 10
+LDA KKEV
Sbjct: 150 SLDAEKKEV 158


>sp|RPO11_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus horikoshii (strain ATCC

Query: 1 DTLDAWKKEV 10
+ LDAW+K V
Sbjct: 84 EVLDAWEKVV 93


>sp|RSGA_METMA|SMALL ribosomal subunit biogenesis GTPase|Methanosarcina mazei (strain

Query: 1 DTLDAWKKEV 10
DT+ W +E+
Sbjct: 16 DTIPGWNEEL 25


>sp|TRM56_METTH|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanothermobacter

Query: 3 LDAWKKE 9
+D+WKK+
Sbjct: 71 IDSWKKD 77


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 WKKEV 10
WKKEV
Sbjct: 316 WKKEV 320


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 TLDAW 6
TLDAW
Sbjct: 328 TLDAW 332




258|Sequence|1286|1295|WKKEVEKKPP

>sp|HIS6_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii (strain

Query: 1 WKKEVEK 7
W KEVEK
Sbjct: 156 WAKEVEK 162


>sp|HIS6_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 1 WKKEVEK 7
W KEVEK
Sbjct: 156 WAKEVEK 162


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WKKEVEK 7
WKKEVEK
Sbjct: 316 WKKEVEK 322


>sp|HDRE_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina thermophila

Query: 1 WKKEVEKKP 9
WK+ EK P
Sbjct: 71 WKQVTEKSP 79


Query: 1 WKKEVEKKPP 10
W K+V +K P
Sbjct: 70 WWKQVTEKSP 79


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WKKEVEKKPP 10
WK +VE PP
Sbjct: 452 WKLDVEVSPP 461


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WKKEVEKKPP 10
WK +V+ PP
Sbjct: 290 WKNQVDGVPP 299


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 1 WKKEVEKKP 9
+K+E+EK P
Sbjct: 154 YKEEIEKIP 162


>sp|HIS6_PYRAE|IMIDAZOLE glycerol phosphate synthase subunit|Pyrobaculum aerophilum (strain

Query: 1 WKKEVEK 7
W KEVE+
Sbjct: 159 WAKEVEE 165


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 1 WKKEVEKKPP 10
W KE+E+K P
Sbjct: 276 WVKEIEEKMP 285


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 WKKEVE 6
WKKE+E
Sbjct: 669 WKKEIE 674


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 WKKEVEK 7
WKKE+EK
Sbjct: 316 WKKELEK 322


>sp|HCGF_METM7|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 3 KEVEKKP 9
KEVEK P
Sbjct: 27 KEVEKDP 33


>sp|RNZ_PYRFU|RIBONUCLEASE Z|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WKKEVEKK 8
W KE+EK+
Sbjct: 171 WMKELEKR 178


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 1 WKKEVEKKPP 10
WK +V+ PP
Sbjct: 452 WKLDVDVSPP 461


>sp|SPSS2_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WKKEVEK 7
WK+EVEK
Sbjct: 284 WKEEVEK 290


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WKKEVEKKPP 10
WK +V+ PP
Sbjct: 452 WKLDVDVSPP 461


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 WKKEVEKK 8
+KKE+EKK
Sbjct: 602 YKKEIEKK 609


>sp|HIS6_THEON|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus onnurineus (strain

Query: 1 WKKEVEK 7
W KEVE+
Sbjct: 156 WAKEVER 162




259|Sequence|1291|1300|EKKPPMMSID

>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KKPPMMSID 10
K PP++ ID
Sbjct: 153 KTPPLLFID 161


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EKKPPMM 7
EK+PP++
Sbjct: 564 EKRPPLL 570




260|Sequence|1296|1305|MMSIDDAYEV

>sp|PSB_METKA|PROTEASOME subunit beta|Methanopyrus kandleri (strain AV19 /

Query: 2 MSIDDAYEV 10
MS+DDA EV
Sbjct: 159 MSLDDAIEV 167


>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 MSIDDAYEV 10
MSID+A EV
Sbjct: 396 MSIDNAIEV 404


>sp|RPO5_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus shibatae (strain ATCC

Query: 1 MMSIDDAYEV 10
++SID+AY++
Sbjct: 22 VLSIDEAYKI 31


>sp|RPO5_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 MMSIDDAYEV 10
++SID+AY++
Sbjct: 22 VLSIDEAYKI 31


>sp|RPO5_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 MMSIDDAYEV 10
++SID+AY++
Sbjct: 22 VLSIDEAYKI 31


>sp|RPO5_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 MMSIDDAYEV 10
++SID+AY++
Sbjct: 22 VLSIDEAYKI 31


>sp|RPO5_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 MMSIDDAYEV 10
++SID+AY++
Sbjct: 22 VLSIDEAYKI 31


>sp|RPO5_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 MMSIDDAYEV 10
++SID+AY++
Sbjct: 22 VLSIDEAYKI 31


>sp|RPO5_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 1 MMSIDDAYEV 10
++SID+AY++
Sbjct: 22 VLSIDEAYKI 31


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 MMSIDDAY 8
+MSIDD Y
Sbjct: 38 VMSIDDVY 45


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 MMSIDDAY 8
+MSIDD Y
Sbjct: 38 VMSIDDVY 45


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 MMSIDDAY 8
+MSIDD Y
Sbjct: 38 VMSIDDVY 45


>sp|MTHK_METTH|CALCIUM-GATED potassium channel MthK|Methanothermobacter thermautotrophicus

Query: 3 SIDDAYE 9
SIDD YE
Sbjct: 242 SIDDGYE 248


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 MMSIDDAY 8
+MSIDD Y
Sbjct: 38 VMSIDDVY 45


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 MMSIDDAY 8
+MSIDD Y
Sbjct: 38 VMSIDDVY 45


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 MMSIDDAY 8
+MSIDD Y
Sbjct: 38 VMSIDDVY 45


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 1 MMSIDDAY 8
+MSIDD Y
Sbjct: 38 VMSIDDVY 45


>sp|DPO4_SULAC|DNA polymerase IV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 MSIDDAYEV 10
+SID+AY+V
Sbjct: 306 ISIDNAYKV 314


>sp|DPO4_SACSO|DNA polymerase IV|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 2 MSIDDAYEV 10
+SID+AY+V
Sbjct: 306 ISIDNAYKV 314


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 3 SIDDAYEV 10
++DD YE+
Sbjct: 2839 TVDDPYEI 2846


>sp|RPO5_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus solfataricus (strain

Query: 1 MMSIDDAYEV 10
+++ID+AY++
Sbjct: 22 VLNIDEAYKI 31


>sp|PURP_PYRFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MMSIDDAYE 9
+MSID YE
Sbjct: 196 LMSIDRRYE 204


>sp|Y533_PYRHO|UNCHARACTERIZED protein PH0533|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 SIDDAYEV 10
+ID AYEV
Sbjct: 81 AIDKAYEV 88


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 1 MMSIDDAYE 9
+MSID YE
Sbjct: 195 LMSIDRRYE 203


>sp|PURP_PYRAB|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 MMSIDDAYE 9
+MSID YE
Sbjct: 199 LMSIDRRYE 207


>sp|TRPD_METST|ANTHRANILATE phosphoribosyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 2 MSIDDAYE 9
+++D+AYE
Sbjct: 16 LTVDEAYE 23


>sp|SYH_PYRAR|HISTIDINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 MSIDDAYEV 10
MS+D+A EV
Sbjct: 225 MSLDEAVEV 233




261|Sequence|1301|1310|DAYEVLNLPQ

>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 1 DAYEVLNLPQ 10
+AYEVL+ PQ
Sbjct: 51 EAYEVLSDPQ 60


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DAYEVLNLPQ 10
+AYEVL+ PQ
Sbjct: 52 EAYEVLSDPQ 61


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DAYEVLNLPQ 10
D YE+L LP+
Sbjct: 6 DYYEILGLPK 15


>sp|RPO10_STAMF|DNA-DIRECTED RNA polymerase subunit Rpo10|Staphylothermus marinus (strain ATCC

Query: 2 AYEVLNLPQ 10
+YE+LN P+
Sbjct: 56 SYEILNFPK 64


>sp|PYRDB_METAR|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocella arvoryzae (strain

Query: 1 DAYEVLNLP 9
D YEVL++P
Sbjct: 225 DLYEVLDIP 233


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 AYEVLNLP 9
AYE++NLP
Sbjct: 430 AYEMVNLP 437


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AYEVLNLP 9
AYE++NLP
Sbjct: 430 AYEMVNLP 437


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 AYEVLNLP 9
AYE++NLP
Sbjct: 430 AYEMVNLP 437


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DAYEVLNLPQ 10
+AYEVL+ P+
Sbjct: 52 EAYEVLSDPE 61


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DAYEVLNLPQ 10
DAY + LPQ
Sbjct: 280 DAYSIRCLPQ 289


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DAYEVLNLPQ 10
DAY + LPQ
Sbjct: 280 DAYSIRCLPQ 289


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 3 YEVLNLPQ 10
YEVLN P+
Sbjct: 340 YEVLNTPE 347


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DAYEVLNLP 9
DA+ VL LP
Sbjct: 294 DAWSVLTLP 302


>sp|ASPG_PYRFU|L-ASPARAGINASE furiosus (strain ATCC 43587

Query: 1 DAYEVLNLP 9
DA+E +N P
Sbjct: 161 DAFESINYP 169


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 AYEVLNLP 9
AYE++N+P
Sbjct: 420 AYEMVNVP 427


>sp|ILVC_METKA|KETOL-ACID reductoisomerase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 1 DAYEVLNLPQ 10
D +EVL +P+
Sbjct: 60 DGFEVLPIPE 69


>sp|BIOB_NITMS|BIOTIN synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DAYEVLNLPQ 10
DA ++LN+P+
Sbjct: 24 DAEKLLNIPE 33


>sp|PYRI_THESM|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus sibiricus

Query: 4 EVLNLPQ 10
E+LNLP+
Sbjct: 28 EILNLPE 34


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 1 DAYEVLNLP 9
DA+ VL LP
Sbjct: 294 DAWSVLTLP 302


>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 1 DAYEVLN 7
DAY+++N
Sbjct: 201 DAYDIIN 207


>sp|Y767_THEAC|UPF0150 protein Ta0767|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DAYEVLNLP 9
D Y V+N+P
Sbjct: 12 DGYYVVNVP 20




262|Sequence|1306|1315|LNLPQGQGPH

>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 LNLPQGQG 8
LN+PQ +G
Sbjct: 214 LNIPQAEG 221


>sp|MTRH_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanopyrus kandleri (strain AV19 /

Query: 1 LNLPQGQGPH 10
L LP G PH
Sbjct: 221 LGLPVGGAPH 230


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LPQGQGP 9
+P GQGP
Sbjct: 107 IPTGQGP 113


>sp|Y289_METJA|UNCHARACTERIZED protein MJ0289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNLPQGQGP 9
L +PQGQ P
Sbjct: 122 LLVPQGQSP 130


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 3 LPQGQGP 9
+P GQGP
Sbjct: 126 IPAGQGP 132


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 LNLPQGQGPH 10
LNLP+G+ +
Sbjct: 40 LNLPEGKSEY 49


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 LNLPQGQGPH 10
LNLP+G+ +
Sbjct: 40 LNLPEGKSEY 49


>sp|MTRH_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain C5

Query: 1 LNLPQGQGPH 10
L LP G G H
Sbjct: 219 LGLPVGSGIH 228


>sp|MTRH_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain DSM

Query: 1 LNLPQGQGPH 10
L LP G G H
Sbjct: 219 LGLPVGSGIH 228


>sp|MTRH_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus aeolicus (strain ATCC

Query: 1 LNLPQGQGPH 10
L LP G G H
Sbjct: 219 LGLPVGSGIH 228




263|Sequence|1311|1320|GQGPHDESKI

>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 2 QGPHDESKI 10
+ PHDE+++
Sbjct: 129 RNPHDEARV 137


>sp|YPV5B_METTF|UNCHARACTERIZED protein ORF5B|Methanothermobacter thermautotrophicus

Query: 2 QGPHDESKI 10
+GPHD + I
Sbjct: 122 RGPHDANNI 130


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GPHDESKI 10
GPHD S +
Sbjct: 448 GPHDSSTV 455


>sp|PRIS_METST|DNA primase small subunit PriS|Methanosphaera stadtmanae (strain ATCC

Query: 1 GQGPHDESKI 10
G GP+D K+
Sbjct: 45 GNGPNDRYKV 54


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain

Query: 1 GQGPHDESKI 10
G+GP+D K+
Sbjct: 42 GKGPNDRYKV 51


>sp|Y635_METJA|UNCHARACTERIZED protein MJ0635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QGPHDESKI 10
+GP DE KI
Sbjct: 275 EGPEDELKI 283


>sp|YPV5A_METTF|UNCHARACTERIZED protein ORF5A|Methanothermobacter thermautotrophicus

Query: 2 QGPHDESKI 10
+GPHD + I
Sbjct: 175 RGPHDANNI 183


>sp|CARA_METTH|CARBAMOYL phosphate synthase small chain|Methanothermobacter

Query: 1 GQGPHDESKI 10
G GPHD I
Sbjct: 340 GPGPHDTVNI 349


>sp|RS4E_HALSA|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain

Query: 1 GQGPHDESKI 10
G GPH ES +
Sbjct: 28 GAGPHGESGV 37


>sp|RS4E_HALS3|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain

Query: 1 GQGPHDESKI 10
G GPH ES +
Sbjct: 28 GAGPHGESGV 37


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM

Query: 1 GQGPHDESKI 10
G+GP+D +
Sbjct: 45 GEGPNDRKNV 54


>sp|CARA_ARCFU|CARBAMOYL phosphate synthase small chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 GQGPHD 6
G GPHD
Sbjct: 337 GPGPHD 342


>sp|RS4E_HALMA|SMALL ribosomal subunit protein eS4|Haloarcula marismortui (strain ATCC

Query: 1 GQGPHDESKI 10
G GPH ES +
Sbjct: 28 GAGPHGESGV 37


>sp|PANB_PYRNV|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GQGPHDESKI 10
G GPH + +I
Sbjct: 201 GSGPHCDGQI 210


>sp|PANB_PYRIL|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GQGPHDESKI 10
G GPH + +I
Sbjct: 201 GSGPHCDGQI 210


>sp|RS4E_HALLT|SMALL ribosomal subunit protein eS4|Halorubrum lacusprofundi (strain

Query: 1 GQGPHDESKI 10
G GPH E+ +
Sbjct: 28 GAGPHGEAGV 37


>sp|CARA_METM7|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C7

Query: 1 GQGPHD 6
G GPHD
Sbjct: 340 GPGPHD 345


>sp|PANB_PYRCJ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GQGPHDESKI 10
G GPH + +I
Sbjct: 205 GAGPHCDGQI 214


>sp|CARA_METMP|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain

Query: 1 GQGPHD 6
G GPHD
Sbjct: 340 GPGPHD 345


>sp|CARA_METM6|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C6

Query: 1 GQGPHD 6
G GPHD
Sbjct: 340 GPGPHD 345


>sp|CARA_METM5|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C5

Query: 1 GQGPHD 6
G GPHD
Sbjct: 340 GPGPHD 345




264|Sequence|1316|1325|DESKIRKAYF

>sp|Y097_ARCFU|UNCHARACTERIZED protein AF_0097|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SKIRKAYF 10
SKIRK YF
Sbjct: 10 SKIRKGYF 17


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DESKIRKAYF 10
DESKIRK
Sbjct: 220 DESKIRKVIL 229


>sp|SYY_ARCFU|TYROSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ESKIRKAY 9
E KIRKAY
Sbjct: 233 ERKIRKAY 240


>sp|Y399_METKA|UPF0201 protein MK0399|Methanopyrus kandleri (strain AV19 /

Query: 1 DESKIRKA 8
DE K+RKA
Sbjct: 16 DEEKVRKA 23


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 DESKIRKAYF 10
+E++I KAY+
Sbjct: 315 EETRINKAYY 324


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 DESKIRKAYF 10
+E++I KAY+
Sbjct: 315 EETRINKAYY 324


>sp|ARLY_METJA|ARGININOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DESKIRKA 8
DE KI+KA
Sbjct: 419 DEEKIKKA 426


>sp|SYY_NANEQ|TYROSINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 KIRKAY 9
KIRKAY
Sbjct: 273 KIRKAY 278




265|Sequence|1321|1330|RKAYFRLAQK

>sp|ARLY_PYRIL|ARGININOSUCCINATE lyase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RKAYFRLAQK 10
RKAYF+LA++
Sbjct: 376 RKAYFQLAKE 385


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RKAYFRLAQK 10
+KAY RLA+K
Sbjct: 22 KKAYRRLARK 31


>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RKAYFRLA 8
RKAYF+LA
Sbjct: 376 RKAYFQLA 383


>sp|SURE_PYRAR|5'-NUCLEOTIDASE SurE|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RKAYFRLAQK 10
R A FR AQK
Sbjct: 186 RAAKFRFAQK 195


>sp|TRMJ_SULAC|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Sulfolobus acidocaldarius

Query: 1 RKAYFRLAQK 10
RK Y RLA+K
Sbjct: 218 RKIYVRLAKK 227


>sp|ARLY_PYRCJ|ARGININOSUCCINATE lyase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RKAYFRLAQK 10
R+AYF+LA++
Sbjct: 376 RRAYFQLAEE 385


>sp|ARLY_PYRAR|ARGININOSUCCINATE lyase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RKAYFRLAQK 10
RKAYF LA +
Sbjct: 376 RKAYFELASE 385


>sp|ARLY_PYRNV|ARGININOSUCCINATE lyase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RKAYFRLAQK 10
R+AYF+LA++
Sbjct: 376 RRAYFQLARE 385




266|Sequence|1326|1335|RLAQKYHPDK

>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RLAQKYHPD 9
RLA+KYHPD
Sbjct: 27 RLARKYHPD 35


>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 1 RLAQKYHPDK 10
+LA KYHPD+
Sbjct: 28 KLALKYHPDR 37


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 2 LAQKYHPD 9
LA+KYHPD
Sbjct: 27 LAKKYHPD 34


>sp|TRPD_METMP|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 LAQKYHP 8
AQKYHP
Sbjct: 142 FAQKYHP 148


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 LAQKYHP 8
AQKYHP
Sbjct: 142 FAQKYHP 148


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LAQKYHPD 9
LA+K+HPD
Sbjct: 27 LAKKWHPD 34


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RLAQKYHPDK 10
+LA +YHPD+
Sbjct: 28 KLALQYHPDR 37


>sp|DNAJ_METMZ|CHAPERONE protein DnaJ|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 RLAQKYHPDK 10
+LA +YHPD+
Sbjct: 28 KLALQYHPDR 37


>sp|DNAJ_METMA|CHAPERONE protein DnaJ|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RLAQKYHPDK 10
+LA +YHPD+
Sbjct: 28 KLALQYHPDR 37


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LAQKYHPD 9
LA+K+HPD
Sbjct: 27 LAKKWHPD 34


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LAQKYHP 8
L QKYHP
Sbjct: 447 LIQKYHP 453


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 RLAQKYHP 8
RLAQ+ HP
Sbjct: 387 RLAQEMHP 394


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 4 QKYHPD 9
QKYHP+
Sbjct: 453 QKYHPN 458


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LAQKYHP 8
L QKYHP
Sbjct: 447 LIQKYHP 453


>sp|TRPD_NITMS|ANTHRANILATE phosphoribosyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LAQKYHP 8
AQK+HP
Sbjct: 152 FAQKFHP 158


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 RLAQKYHPD 9
RL KY PD
Sbjct: 400 RLLNKYRPD 408


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 3 AQKYHPD 9
A KYHPD
Sbjct: 28 AAKYHPD 34


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LAQKYHPD 9
L +KYHP+
Sbjct: 454 LIKKYHPN 461


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 4 QKYHPDK 10
+KYHP K
Sbjct: 449 EKYHPSK 455


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 3 AQKYHPD 9
A KYHPD
Sbjct: 28 AAKYHPD 34


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 4 QKYHP 8
QKYHP
Sbjct: 450 QKYHP 454


>sp|EF1B_PYRCJ|ELONGATION factor 1-beta|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RLAQKYHPDK 10
RLA KY DK
Sbjct: 30 RLAPKYKVDK 39


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 4 QKYHP 8
QKYHP
Sbjct: 450 QKYHP 454


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 QKYHP 8
QKYHP
Sbjct: 450 QKYHP 454


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 4 QKYHP 8
QKYHP
Sbjct: 450 QKYHP 454


>sp|RNZ_CENSY|RIBONUCLEASE Z|Cenarchaeum symbiosum (strain A)

Query: 1 RLAQKYHP 8
R AQK HP
Sbjct: 278 REAQKIHP 285


>sp|AATB_THEPD|A-TYPE ATP synthase subunit B|Thermofilum pendens (strain DSM 2475

Query: 1 RLAQKYHP 8
++ +KYHP
Sbjct: 449 KIIEKYHP 456


>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 QKYHPD 9
Q++HPD
Sbjct: 308 QRWHPD 313


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 AQKYHPDK 10
A YHPD+
Sbjct: 208 ANPYHPDE 215


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LAQKYHP 8
L +KYHP
Sbjct: 454 LIEKYHP 460


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 2 LAQKYHP 8
A KYHP
Sbjct: 151 FAPKYHP 157


>sp|TRPD_PYRAE|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LAQKYHP 8
A KYHP
Sbjct: 151 FAPKYHP 157


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 2 LAQKYHP 8
A KYHP
Sbjct: 142 FAPKYHP 148


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 LAQKYHP 8
A KYHP
Sbjct: 142 FAPKYHP 148


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 LAQKYHP 8
A KYHP
Sbjct: 142 FAPKYHP 148


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 3 AQKYHPD 9
A++YHPD
Sbjct: 28 AREYHPD 34


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 LAQKYHP 8
L +KYHP
Sbjct: 973 LIEKYHP 979


>sp|HIS1_METS5|ATP phosphoribosyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 RLAQKYH 7
R+A KYH
Sbjct: 113 RIATKYH 119


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 AQKYHPDK 10
A YHPD+
Sbjct: 208 ANPYHPDE 215


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LAQKYH 7
LAQ+YH
Sbjct: 564 LAQRYH 569


>sp|NADA_METTH|QUINOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RLAQKYHPD 9
R+A+K +PD
Sbjct: 98 RMARKRYPD 106


>sp|DHE2_HALSI|NAD-SPECIFIC glutamate dehydrogenase A|Halobacterium salinarum (Halobacterium

Query: 5 KYHPD 9
+YHPD
Sbjct: 94 RYHPD 98


>sp|Y816_METB6|UPF0173 metal-dependent hydrolase Mboo_0816|Methanoregula boonei (strain

Query: 2 LAQKYHPD 9
+ + YHPD
Sbjct: 141 IGELYHPD 148


>sp|Y1705_METHJ|UPF0173 metal-dependent hydrolase Mhun_1705|Methanospirillum hungatei JF-1

Query: 2 LAQKYHPD 9
+ + YHPD
Sbjct: 140 IGELYHPD 147


>sp|Y1063_METPE|UPF0173 metal-dependent hydrolase Mpal_1063|Methanosphaerula palustris

Query: 2 LAQKYHPD 9
+ + YHPD
Sbjct: 141 IGELYHPD 148


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 AQKYHPD 9
A YHPD
Sbjct: 208 ANPYHPD 214


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 AQKYHPD 9
A YHPD
Sbjct: 208 ANPYHPD 214


>sp|AATB_METB6|A-TYPE ATP synthase subunit B|Methanoregula boonei (strain DSM 21154

Query: 2 LAQKYHP 8
L KYHP
Sbjct: 447 LINKYHP 453


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus jannaschii

Query: 5 KYHPD 9
KYHPD
Sbjct: 227 KYHPD 231


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 3 AQKYHPD 9
A +YHPD
Sbjct: 28 ASEYHPD 34


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LAQKYHPD 9
LA+KY P+
Sbjct: 595 LAEKYSPE 602


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RLAQKYHP 8
+ +KYHP
Sbjct: 446 KFIEKYHP 453


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 4 QKYHPD 9
+KYHP+
Sbjct: 185 KKYHPE 190




267|Sequence|1331|1340|YHPDKNPEGR

>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 1 YHPDKNPE 8
YHPD+N E
Sbjct: 33 YHPDRNKE 40


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 1 YHPDKNP 7
YHPD NP
Sbjct: 31 YHPDANP 37


>sp|DNAJ_METMZ|CHAPERONE protein DnaJ|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 YHPDKNPE 8
YHPD+N E
Sbjct: 33 YHPDRNKE 40


>sp|DNAJ_METMA|CHAPERONE protein DnaJ|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YHPDKNPE 8
YHPD+N E
Sbjct: 33 YHPDRNKE 40


>sp|GUAAB_SULTO|GMP synthase [glutamine-hydrolyzing] subunit B|Sulfurisphaera tokodaii

Query: 4 DKNPEG 9
DKNPEG
Sbjct: 308 DKNPEG 313


>sp|Y1289_METM7|UPF0248 protein MmarC7_1289|Methanococcus maripaludis (strain C7 /

Query: 1 YHPDKNPE 8
+HPD NPE
Sbjct: 11 WHPDYNPE 18


>sp|Y286_METMP|UPF0248 protein MMP0286|Methanococcus maripaludis (strain DSM 14266

Query: 1 YHPDKNPE 8
+HPD NPE
Sbjct: 11 WHPDYNPE 18


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YHPDKNPE 8
YHPD+N +
Sbjct: 33 YHPDRNKD 40


>sp|CARA_HALSA|CARBAMOYL phosphate synthase small chain|Halobacterium salinarum (strain ATCC

Query: 1 YHPDKNP 7
YHP+ NP
Sbjct: 321 YHPEANP 327


>sp|CARA_HALS3|CARBAMOYL phosphate synthase small chain|Halobacterium salinarum (strain ATCC

Query: 1 YHPDKNP 7
YHP+ NP
Sbjct: 321 YHPEANP 327


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 YHPDKNPE 8
+ PDK+PE
Sbjct: 565 WRPDKSPE 572


>sp|FTR_METJA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PDKNPEGR 10
P K P+GR
Sbjct: 62 PSKTPDGR 69


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 YHPDKNPE 8
+ PDK PE
Sbjct: 573 WRPDKGPE 580


>sp|ALBA_METJA|DNA/RNA-BINDING protein Alba|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KNPEGR 10
KNP+GR
Sbjct: 69 KNPDGR 74


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 1 YHPDKNPE 8
Y P +NPE
Sbjct: 197 YFPARNPE 204


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 1 YHPDKNPE 8
+ PDK PE
Sbjct: 570 WRPDKRPE 577


>sp|GATD_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfurisphaera tokodaii (strain DSM

Query: 1 YHPDKNPE 8
Y+P NPE
Sbjct: 313 YYPGINPE 320


>sp|Y2739_METHJ|UPF0758 protein Mhun_2739|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HPDKNPE 8
HP NPE
Sbjct: 176 HPSGNPE 182


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 YHPDKNPE 8
+ PDK PE
Sbjct: 569 WRPDKGPE 576


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YHPDKNPE 8
+ PDK PE
Sbjct: 564 WRPDKGPE 571


>sp|HMD_METM7|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 YHPDKNPEGR 10
YHP PE +
Sbjct: 200 YHPGAVPENK 209


>sp|NADA_PYRFU|QUINOLINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HPDKNPE 8
HP+ NPE
Sbjct: 200 HPECNPE 206


>sp|Y226_ARCFU|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase AF_0226|Archaeoglobus

Query: 2 HPDKNPEGR 10
HP +NP R
Sbjct: 150 HPAENPSPR 158


>sp|Y086_METJA|UNCHARACTERIZED protein MJ0086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PDKNPE 8
PDK+PE
Sbjct: 6 PDKSPE 11


>sp|RTCA_DESA1|RNA 3'-terminal phosphate cyclase|Desulfurococcus amylolyticus (strain

Query: 1 YHPDKNP 7
Y PDK+P
Sbjct: 231 YPPDKDP 237


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YHPDKNPEGR 10
+HPD +PE +
Sbjct: 31 WHPDLHPENK 40


>sp|H669_METJA|PROBABLE ATP-dependent RNA helicase MJ0669|Methanocaldococcus jannaschii

Query: 1 YHPDKNPE 8
YH +NPE
Sbjct: 313 YHLPQNPE 320


>sp|GATA_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus vannielii (strain ATCC

Query: 1 YHPDKNPEG 9
Y P KNP+
Sbjct: 114 YGPTKNPKA 122


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 PDKNPEGR 10
P KNPE R
Sbjct: 157 PGKNPEIR 164


>sp|RL14_METJA|LARGE ribosomal subunit protein uL14|Methanocaldococcus jannaschii

Query: 3 PDKNPEG 9
PD NP+G
Sbjct: 100 PDGNPKG 106


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 YHPDKNPEG 9
+HP PEG
Sbjct: 138 FHPYNPPEG 146


>sp|FMDC_METWO|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 4 DKNPEG 9
+KNPEG
Sbjct: 240 EKNPEG 245


>sp|FMDC_METTM|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 4 DKNPEG 9
+KNPEG
Sbjct: 240 EKNPEG 245


>sp|T2M2_METJA|TYPE II restriction enzyme MjaII|Methanocaldococcus jannaschii (strain

Query: 1 YHPDKNPE 8
Y P +NPE
Sbjct: 205 YDPTENPE 212


>sp|SELD_METKA|SELENIDE, water dikinase|Methanopyrus kandleri (strain AV19 /

Query: 2 HPDKNPEGR 10
HPD +GR
Sbjct: 70 HPDPYTQGR 78


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YHPDKNPEG 9
Y D+NP G
Sbjct: 29 YEADENPSG 37


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PDKNPEG 9
PD NP G
Sbjct: 623 PDSNPPG 629


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 HPDKNPEG 9
HPD+N G
Sbjct: 425 HPDRNELG 432


>sp|SPEE_THEVO|POLYAMINE aminopropyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YHPDKNP 7
YH KNP
Sbjct: 73 YHMTKNP 79




268|Sequence|1336|1345|NPEGRDMFEK

>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 NPEGRDMF 8
NP+GRD F
Sbjct: 703 NPKGRDFF 710


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 1 NPEGRDMF 8
NP GRD F
Sbjct: 703 NPSGRDFF 710


>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 2 PEGRDMFE 9
P+GRDM E
Sbjct: 18 PKGRDMIE 25


>sp|CBID_METVS|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NPEGRDMFEK 10
NP+ R+M EK
Sbjct: 127 NPKPREMIEK 136


>sp|SURE_METKA|5'-NUCLEOTIDASE SurE|Methanopyrus kandleri (strain AV19 /

Query: 2 PEGRDMFE 9
PEG D++E
Sbjct: 219 PEGTDLYE 226


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 1 NPEGRDMF 8
+PE DMF
Sbjct: 175 HPESHDMF 182


>sp|Y120_METTH|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase|Methanothermobacter

Query: 1 NPEGRDMFE 9
NP RD+F+
Sbjct: 174 NPGTRDLFD 182


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 NPEGRDMFE 9
P GRD+ E
Sbjct: 183 TPHGRDILE 191


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EGRDMFEK 10
EG D++EK
Sbjct: 68 EGEDLYEK 75


>sp|XYLH_SULAC|XYLOSE/ARABINOSE import permease protein XylH|Sulfolobus acidocaldarius (strain ATCC

Query: 1 NPEGRDMFEK 10
+PEG+D K
Sbjct: 330 SPEGKDRITK 339


>sp|Y1048_THEON|UPF0179 protein TON_1048|Thermococcus onnurineus (strain NA1)

Query: 1 NPEGRDMF 8
+PE RD+F
Sbjct: 105 DPEKRDLF 112


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 3 EGRDMFEK 10
EGRD F K
Sbjct: 245 EGRDYFSK 252


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 NPEGRDMFEK 10
N GR+++EK
Sbjct: 925 NENGRELYEK 934


>sp|ILVC_CENSY|KETOL-ACID reductoisomerase (NADP(+))|Cenarchaeum symbiosum (strain A)

Query: 3 EGRDMFEK 10
+GRD F+K
Sbjct: 298 DGRDAFDK 305


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NPEGRDMFEK 10
NP+ DM EK
Sbjct: 459 NPDYIDMIEK 468




269|Sequence|1341|1350|DMFEKVNKAY

>sp|Y564_METTH|UNCHARACTERIZED protein MTH_564|Methanothermobacter thermautotrophicus (strain

Query: 1 DMFEKVNKA 9
DM E VN+A
Sbjct: 62 DMLETVNRA 70


>sp|GCH3_METJA|GTP cyclohydrolase III|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DMFEKVNKAY 10
D+F ++NK Y
Sbjct: 199 DIFNRINKKY 208


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 MFEKVNKAY 10
+FE V KAY
Sbjct: 268 LFEDVEKAY 276


>sp|Y142_METJA|PUTATIVE toxin MJ0142|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DMFEKVNKAY 10
++FE +N+AY
Sbjct: 86 ELFEYINEAY 95


>sp|LYSK_SULTO|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DMFEKVNKAY 10
D FEKV+K +
Sbjct: 34 DFFEKVSKEF 43


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DMFEKVNKAY 10
D+FE+++K Y
Sbjct: 487 DLFEELSKKY 496


>sp|RL4_NANEQ|LARGE ribosomal subunit protein uL4|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DMFEKVNK 8
D +EK+NK
Sbjct: 114 DWYEKINK 121


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 EKVNKAY 10
EK+N+AY
Sbjct: 239 EKINQAY 245


>sp|MPGP_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MFEKVNKAY 10
MFE V+KA+
Sbjct: 211 MFEVVDKAF 219


>sp|KTHY_META3|PROBABLE thymidylate kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DMFEKVNKAY 10
++ +KVNK Y
Sbjct: 144 EILQKVNKKY 153


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 1 DMFEKVNKAY 10
D+FE ++K Y
Sbjct: 483 DLFESLSKKY 492


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 1 DMFEKVNKAY 10
D+FE ++K Y
Sbjct: 483 DLFESLSKKY 492


>sp|AROD_THEVO|3-DEHYDROQUINATE dehydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DMFEKVN 7
D+F+KVN
Sbjct: 55 DLFDKVN 61




270|Sequence|1346|1355|VNKAYEFLCT

>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KAYEFLCT 10
KAYEFL +
Sbjct: 1093 KAYEFLSS 1100


>sp|PYRF_METST|OROTIDINE 5'-phosphate decarboxylase|Methanosphaera stadtmanae (strain ATCC

Query: 2 NKAYEFL 8
NKAYE L
Sbjct: 17 NKAYEIL 23


>sp|TAW21_SACS2|TRNA 4-demethylwyosine(37)-methyltransferase Taw21|Saccharolobus

Query: 1 VNKAYEFL 8
+NKAYE L
Sbjct: 163 LNKAYEVL 170


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 VNKAYEFLC 9
V K Y F+C
Sbjct: 37 VAKTYPFMC 45




271|Sequence|1351|1360|EFLCTKSAKI

>sp|FEN_METTH|FLAP endonuclease 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EFLCTK 6
EFLCT+
Sbjct: 294 EFLCTE 299




272|Sequence|1356|1365|KSAKIVDGPD

>sp|RL6_PICTO|LARGE ribosomal subunit protein uL6|Picrophilus torridus (strain ATCC

Query: 1 KSAKIVDG 8
+SAKIVDG
Sbjct: 119 RSAKIVDG 126


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 3 AKIVDGPD 10
KIVDG D
Sbjct: 759 GKIVDGSD 766


>sp|Y1022_METTH|PUTATIVE biopolymer transport protein ExbB|Methanothermobacter

Query: 2 SAKIVDGPD 10
S ++VD PD
Sbjct: 234 SVRVVDEPD 242


>sp|TAL_THEVO|PROBABLE transaldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 KIVDGP 9
KIVDGP
Sbjct: 51 KIVDGP 56


>sp|TAL_THEAC|PROBABLE transaldolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 KIVDGP 9
KIVDGP
Sbjct: 51 KIVDGP 56


>sp|OTC_METTH|ORNITHINE carbamoyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 SAKIVDGP 9
+A+++DGP
Sbjct: 268 TAEVIDGP 275


>sp|Y053_METJA|UNCHARACTERIZED protein MJ0053|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KSAKIVD 7
KSAKI+D
Sbjct: 208 KSAKIID 214


>sp|QUEC_METBU|7-CYANO-7-DEAZAGUANINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 5 IVDGPD 10
++DGPD
Sbjct: 88 LIDGPD 93




273|Sequence|1361|1370|VDGPDPENII

>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 VDGPDPE 7
VDGP PE
Sbjct: 416 VDGPSPE 422


>sp|PYRH_METMJ|URIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VDGPDPENI 9
+DG DPEN+
Sbjct: 202 LDGRDPENL 210


>sp|PYRH_METTH|URIDYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VDGPDPENII 10
V+G DPEN++
Sbjct: 201 VNGNDPENLL 210


>sp|PYRH_HYPBU|URIDYLATE kinase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VDGPDPENI 9
V+G DPEN+
Sbjct: 203 VNGSDPENV 211


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 1 VDGPDPENI 9
V P+PEN+
Sbjct: 316 VTAPEPENV 324


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VDGPDPENI 9
+DG DPE +
Sbjct: 398 IDGEDPEKV 406


>sp|PTH_SACI7|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GPDPENII 10
GP PEN+I
Sbjct: 103 GPAPENLI 110


>sp|PTH_SACI6|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GPDPENII 10
GP PEN+I
Sbjct: 103 GPAPENLI 110


>sp|PTH_SACI4|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GPDPENII 10
GP PEN+I
Sbjct: 103 GPAPENLI 110


>sp|PTH_SACI3|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GPDPENII 10
GP PEN+I
Sbjct: 103 GPAPENLI 110


>sp|PTH_SACI2|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GPDPENII 10
GP PEN+I
Sbjct: 103 GPAPENLI 110


>sp|PTH_SACI1|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GPDPENII 10
GP PEN+I
Sbjct: 103 GPAPENLI 110


>sp|WECB_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GPDPENII 10
G DPENI+
Sbjct: 323 GSDPENIL 330


>sp|PYRH_HALMA|URIDYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDGPDPENII 10
+DG DPE ++
Sbjct: 202 LDGTDPERVV 211


>sp|PYRH_METAR|URIDYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VDGPDPENII 10
V+G PEN+I
Sbjct: 201 VNGKQPENLI 210


>sp|PTH_SACS2|PEPTIDYL-TRNA hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GPDPENII 10
GP PEN++
Sbjct: 103 GPAPENLV 110


>sp|PTH_PYRHO|PEPTIDYL-TRNA hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GPDPENII 10
GP PE I+
Sbjct: 104 GPAPEEIV 111


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DGPDPENII 10
DG DPE++I
Sbjct: 97 DGLDPESLI 105


>sp|PTH_THESM|PEPTIDYL-TRNA hydrolase|Thermococcus sibiricus (strain DSM 12597

Query: 3 GPDPENII 10
GP PE I+
Sbjct: 101 GPGPEEIV 108


>sp|TRMI_METJA|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 1 VDGPDPENII 10
+D PDP N++
Sbjct: 187 LDLPDPWNVV 196


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 VDGPDPENI 9
+DG DPE++
Sbjct: 464 LDGTDPESV 472


>sp|PDXS_HALLT|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halorubrum lacusprofundi

Query: 4 PDPENI 9
PDPEN+
Sbjct: 70 PDPENV 75


>sp|PTH_PYRFU|PEPTIDYL-TRNA hydrolase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GPDPENII 10
GP PE ++
Sbjct: 102 GPGPEEVV 109


>sp|PTH_THEKO|PEPTIDYL-TRNA hydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GPDPENII 10
GP PE ++
Sbjct: 101 GPGPEEVV 108


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GPDPEN 8
GP PEN
Sbjct: 361 GPQPEN 366


>sp|Y297_ARCFU|UNCHARACTERIZED protein AF_0297|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDGPDPEN 8
+D PDPE
Sbjct: 1 MDAPDPEK 8


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 VDGPDPENII 10
VD PD +N+I
Sbjct: 288 VDPPDVKNVI 297


>sp|RPO10_METTH|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanothermobacter

Query: 2 DGPDPENII 10
DG DP++++
Sbjct: 26 DGEDPKDVL 34


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VDGPDPENII 10
VD DP NI+
Sbjct: 44 VDPYDPRNIV 53


>sp|PYRH_HALWD|URIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VDGPDPENI 9
+DG DP++I
Sbjct: 202 LDGADPQHI 210


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VDGPDPENII 10
++G DPE I+
Sbjct: 62 LEGKDPEEIV 71


>sp|RL11_HYPBU|LARGE ribosomal subunit protein uL11|Hyperthermus butylicus (strain DSM

Query: 1 VDGPDPENI 9
VDG DP+ +
Sbjct: 137 VDGKDPKQV 145


>sp|MDH_NATPD|MALATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VDGPDPE 7
VDG DPE
Sbjct: 189 VDGADPE 195


>sp|RL11_SULAC|LARGE ribosomal subunit protein uL11|Sulfolobus acidocaldarius (strain

Query: 1 VDGPDPENII 10
V+G DP+++I
Sbjct: 137 VEGKDPKDVI 146


>sp|PYRH_METBU|URIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VDGPDPENII 10
+DG DP++++
Sbjct: 201 MDGTDPQDVL 210


>sp|SUI1_METPE|PROTEIN translation factor SUI1 homolog|Methanosphaerula palustris

Query: 1 VDGPDPENI 9
+DG DP +I
Sbjct: 44 IDGLDPSDI 52


>sp|RPO10_METM7|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcus maripaludis (strain C7

Query: 2 DGPDPENII 10
DG +PE I+
Sbjct: 27 DGENPEEIL 35


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 5 DPENII 10
DPENI+
Sbjct: 77 DPENIL 82


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 5 DPENII 10
DPEN+I
Sbjct: 54 DPENLI 59


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 GPDPENII 10
G +PENI+
Sbjct: 178 GIEPENIV 185


>sp|FOLD_HALWD|BIFUNCTIONAL protein FolD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VDGPDPENI 9
VDG PEN+
Sbjct: 134 VDGFHPENV 142


>sp|MDH_HALMA|MALATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDGPDPE 7
VDG DPE
Sbjct: 189 VDGTDPE 195


>sp|Y294_THEVO|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma volcanium

Query: 2 DGPDPENI 9
D P+PE +
Sbjct: 249 DAPEPERV 256


>sp|ARCH_SULTO|PROTEIN archease|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VDGPDPENII 10
+DG D EN++
Sbjct: 53 IDGYDLENLL 62


>sp|RPO10_METM6|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcus maripaludis (strain C6

Query: 2 DGPDPENII 10
DG +PE I+
Sbjct: 27 DGENPEEIL 35


>sp|AATI_METTH|A-TYPE ATP synthase subunit I|Methanothermobacter thermautotrophicus

Query: 1 VDGPDPENI 9
++ PDPE +
Sbjct: 341 LEDPDPEEV 349


>sp|PYRH_HALSA|URIDYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VDGPDPENII 10
+DG DP I+
Sbjct: 202 LDGTDPRRIV 211


>sp|PYRH_HALS3|URIDYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VDGPDPENII 10
+DG DP I+
Sbjct: 202 LDGTDPRRIV 211


>sp|HTAXP_HALS3|HEAT repeat-containing taxis protein OE_2401F|Halobacterium salinarum

Query: 1 VDGPDPENI 9
+D P+PE I
Sbjct: 39 LDEPEPEGI 47


>sp|PURO_META3|IMP cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VDGPDPENI 9
VDG +PE I
Sbjct: 165 VDGENPEEI 173


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDGPDPENI 9
VDG PEN+
Sbjct: 118 VDGFHPENV 126


>sp|PYRDB_PYRFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus furiosus (strain

Query: 3 GPDPENI 9
G DPEN+
Sbjct: 136 GQDPENV 142


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 4 PDPENII 10
PDP N++
Sbjct: 229 PDPNNVM 235


>sp|RL11_DESA1|LARGE ribosomal subunit protein uL11|Desulfurococcus amylolyticus (strain

Query: 1 VDGPDPENI 9
VDG DP+ +
Sbjct: 137 VDGKDPKEV 145


>sp|FOLD_HALSA|BIFUNCTIONAL protein FolD|Halobacterium salinarum (strain ATCC 700922

Query: 1 VDGPDPENI 9
VDG PEN+
Sbjct: 118 VDGFHPENV 126


>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 1 VDGPDPENI 9
+DG +P NI
Sbjct: 44 IDGWEPNNI 52


>sp|FOLD1_HALMA|BIFUNCTIONAL protein FolD 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDGPDPENI 9
VDG PEN+
Sbjct: 118 VDGFHPENV 126


>sp|DYR2_HALMA|DIHYDROFOLATE reductase 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDGPDPENI 9
+DGP PE +
Sbjct: 57 LDGPLPERL 65




274|Sequence|1366|1375|PENIILILKT

>sp|KPTA2_ARCFU|PROBABLE RNA 2'-phosphotransferase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 PENIILILKT 10
PEN+ ILKT
Sbjct: 127 PENLNSILKT 136


>sp|TRPF_METM5|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C5 /

Query: 1 PENIILILKT 10
P+N++ I+KT
Sbjct: 164 PDNVLKIVKT 173


>sp|HISX_SULTO|HISTIDINOL dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PENIILILKT 10
P NIIL LK
Sbjct: 230 PSNIILDLKA 239


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PENIILILKT 10
PE I+L+ +T
Sbjct: 337 PEKIVLLART 346




275|Sequence|1371|1380|LILKTQSILF

>sp|Y972_METJA|UPF0056 membrane protein MJ0972|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LILKTQSIL 9
LI KTQSIL
Sbjct: 152 LISKTQSIL 160


>sp|FLPA_THEAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma acidophilum (strain

Query: 1 LILKTQSI 8
L+LKT+SI
Sbjct: 176 LVLKTRSI 183




276|Sequence|1376|1385|QSILFNRHKE

>sp|Y1560_METJA|UNCHARACTERIZED MFS-type transporter MJ1560|Methanocaldococcus jannaschii (strain

Query: 1 QSILFNRHKE 10
+ I+FN++KE
Sbjct: 182 EDIVFNKNKE 191


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 1 QSILFNRHK 9
Q + FN+HK
Sbjct: 223 QEVKFNKHK 231


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LFNRHKE 10
+FN HKE
Sbjct: 386 VFNTHKE 392


>sp|Y033_METJA|UNCHARACTERIZED FAD-dependent oxidoreductase MJ0033|Methanocaldococcus jannaschii

Query: 3 ILFNRHKE 10
IL+N++KE
Sbjct: 248 ILYNKYKE 255


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 1 QSILFNRH 8
++ILF RH
Sbjct: 616 EAILFGRH 623


>sp|RL22_METMA|LARGE ribosomal subunit protein uL22|Methanosarcina mazei (strain ATCC

Query: 1 QSILFNRHKE 10
Q++ F RH E
Sbjct: 57 QAVPFKRHSE 66




277|Sequence|1381|1390|NRHKEDLQPY

>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 3 HKEDLQPY 10
H ED+ PY
Sbjct: 565 HSEDVLPY 572


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 1 NRHKEDLQP 9
N KEDL+P
Sbjct: 237 NMVKEDLKP 245


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 4 KEDLQP 9
KED+QP
Sbjct: 391 KEDIQP 396


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EDLQPY 10
EDL+PY
Sbjct: 672 EDLKPY 677


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 2 RHKEDLQP 9
R KE+L+P
Sbjct: 320 RRKEELEP 327


>sp|Y626_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB06260|Pyrococcus abyssi (strain GE5 /

Query: 2 RHKEDLQPY 10
+H+E+L+ Y
Sbjct: 245 KHREELEDY 253




278|Sequence|1386|1395|DLQPYKYAGY

>sp|HUTI_PICTO|IMIDAZOLONEPROPIONASE torridus (strain ATCC 700027

Query: 1 DLQPYKYAGY 10
++ Y YAGY
Sbjct: 169 NINEYDYAGY 178


>sp|PDAD_PYRHO|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 YKYAGY 10
Y+YAGY
Sbjct: 100 YEYAGY 105


>sp|PDAD_PYRAB|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 5 YKYAGY 10
Y+YAGY
Sbjct: 100 YEYAGY 105


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 1 DLQPYKYAGY 10
D++ ++Y GY
Sbjct: 537 DIEEFEYEGY 546


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 4 PYKYAG 9
PYKY G
Sbjct: 491 PYKYMG 496


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 QPYKYAGY 10
QP Y GY
Sbjct: 31 QPIAYTGY 38


>sp|Y1291_METJA|UNCHARACTERIZED protein MJ1291|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLQPYKYAG 9
D PY Y+G
Sbjct: 133 DENPYNYSG 141


>sp|RS13_METJA|SMALL ribosomal subunit protein uS13|Methanocaldococcus jannaschii

Query: 2 LQPYKYAGY 10
L P K AGY
Sbjct: 47 LDPNKLAGY 55


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLQPYKYAG 9
D PY+YA
Sbjct: 345 DRDPYEYAA 353


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DLQPYKYAG 9
D PY+YA
Sbjct: 345 DRDPYEYAA 353


>sp|FLPA_PYRIL|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum islandicum (strain DSM

Query: 4 PYKYAGY 10
PY+YA Y
Sbjct: 141 PYQYAHY 147


>sp|FLPA_PYRCJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum calidifontis (strain

Query: 4 PYKYAGY 10
PY+YA Y
Sbjct: 141 PYQYAHY 147


>sp|FLPA_PYRAE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum aerophilum (strain

Query: 4 PYKYAGY 10
PY+YA Y
Sbjct: 141 PYQYAHY 147


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 1 DLQPYKYAGY 10
DL+ Y AGY
Sbjct: 306 DLEEYPAAGY 315


>sp|FLPA_PYRNV|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum neutrophilum (strain

Query: 4 PYKYAGY 10
PY+YA Y
Sbjct: 141 PYQYAHY 147




279|Sequence|1391|1400|KYAGYPMLIR

>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 1 KYAGYPM 7
+YAGYP+
Sbjct: 163 RYAGYPL 169


>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 1 KYAGYPM 7
+YAGYP+
Sbjct: 163 RYAGYPL 169


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 KYAGYPMLIR 10
+Y GYP+++R
Sbjct: 156 RYLGYPVVVR 165


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 4 GYPMLIR 10
GYP+LIR
Sbjct: 704 GYPVLIR 710


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 4 GYPMLIR 10
GYP+L+R
Sbjct: 693 GYPVLVR 699


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 4 GYPMLIR 10
GYP+L+R
Sbjct: 719 GYPVLVR 725


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 KYAGYPMLIR 10
K GYP+L+R
Sbjct: 701 KEIGYPVLVR 710


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 4 GYPMLIR 10
GYP+L+R
Sbjct: 691 GYPVLVR 697


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 4 GYPMLIR 10
GYP+L+R
Sbjct: 692 GYPVLVR 698


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 4 GYPMLIR 10
GYP+L+R
Sbjct: 694 GYPVLVR 700


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 4 GYPMLIR 10
GYP+L+R
Sbjct: 691 GYPVLVR 697


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 4 GYPMLIR 10
GYP+L+R
Sbjct: 152 GYPVLVR 158


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 KYAGYPMLIR 10
K GYP+L+R
Sbjct: 235 KRIGYPVLVR 244


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 4 GYPMLIR 10
GYP+L+R
Sbjct: 704 GYPVLVR 710


>sp|QUEE_THEAC|7-CARBOXY-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YAGYPML 8
YAG PML
Sbjct: 16 YAGLPML 22


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 KYAGYPML 8
KY G+P+L
Sbjct: 267 KYLGFPIL 274


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 KYAGYPMLIR 10
K G+P+L+R
Sbjct: 700 KRIGFPVLVR 709


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 4 GYPMLIR 10
GYP+L+R
Sbjct: 711 GYPVLVR 717


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 KYAGYPMLIR 10
K G+P+L+R
Sbjct: 699 KRIGFPVLVR 708


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YAGYPML 8
Y GYP L
Sbjct: 106 YGGYPFL 112


>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YAGYPM 7
Y GYPM
Sbjct: 84 YEGYPM 89


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KYAGYPM 7
KY GYP+
Sbjct: 404 KYKGYPV 410


>sp|TIAS_ARCFU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Archaeoglobus fulgidus

Query: 1 KYAGYPMLIR 10
K G+P LIR
Sbjct: 35 KVIGFPRLIR 44


>sp|MBHLB_PYRFU|MEMBRANE-BOUND hydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KYAGYPMLIR 10
K AG+P L+R
Sbjct: 160 KNAGHPYLLR 169


>sp|HOSA_SULTO|HOMOCITRATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KYAGYPM 7
KY+G PM
Sbjct: 266 KYSGIPM 272


>sp|HOSA_SACI7|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KYAGYPM 7
KY+G PM
Sbjct: 267 KYSGIPM 273


>sp|HOSA_SACI6|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KYAGYPM 7
KY+G PM
Sbjct: 267 KYSGIPM 273


>sp|HOSA_SACI4|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KYAGYPM 7
KY+G PM
Sbjct: 267 KYSGIPM 273


>sp|HOSA_SACI3|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KYAGYPM 7
KY+G PM
Sbjct: 267 KYSGIPM 273


>sp|HOSA_SACI1|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KYAGYPM 7
KY+G PM
Sbjct: 267 KYSGIPM 273


>sp|HOSA_SACI2|HOMOCITRATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KYAGYPM 7
KY+G PM
Sbjct: 267 KYSGIPM 273


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 KYAGYPMLI 9
K+A +PM++
Sbjct: 193 KFASHPMVV 201


>sp|HOSA_SACS2|HOMOCITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KYAGYPM 7
KY+G PM
Sbjct: 267 KYSGIPM 273


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 1 KYAGYPMLIR 10
K G+P+L+R
Sbjct: 23 KRIGFPVLVR 32


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KYAGYPM 7
KY GYP+
Sbjct: 404 KYRGYPV 410


>sp|PURQ_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YAGYP 6
YAGYP
Sbjct: 208 YAGYP 212


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium

Query: 4 GYPMLIR 10
GYP L+R
Sbjct: 33 GYPRLVR 39


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YAGYPMLI 9
Y+G+P L+
Sbjct: 339 YSGHPFLV 346


>sp|SPSS_METVS|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KYAGYPMLI 9
K GYP+L+
Sbjct: 183 KSKGYPLLL 191


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 1 KYAGYP 6
K+AGYP
Sbjct: 430 KHAGYP 435


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KYAGYPM 7
+Y GYP+
Sbjct: 406 RYGGYPI 412


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 3 AGYPMLIR 10
A YP+L+R
Sbjct: 39 ADYPLLVR 46


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KYAGYPML 8
KY GY ML
Sbjct: 147 KYPGYGML 154


>sp|Y392_METJA|ZINC metalloprotease MJ0392|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KYAGYPML 8
KY GYP++
Sbjct: 250 KYFGYPVV 257




280|Sequence|1396|1405|PMLIRTITME

***** No hits found ******


281|Sequence|1401|1410|TITMETSDDL

>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ITMETSDD 9
+T+ET+DD
Sbjct: 1013 VTIETTDD 1020




282|Sequence|1406|1415|TSDDLLFSKE

>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 TSDDLLF 7
T+DDL+F
Sbjct: 242 TADDLIF 248


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SDDLLFS 8
SDD+LFS
Sbjct: 481 SDDVLFS 487




283|Sequence|1411|1420|LFSKESPLLP

>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FSKESPLL 9
+SKE PL+
Sbjct: 398 YSKEKPLI 405




284|Sequence|1416|1425|SPLLPAATEL

>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 1 SPLLPAATE 9
SPL PAA E
Sbjct: 116 SPLNPAARE 124


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SPLLPAATE 9
SPL PAA E
Sbjct: 116 SPLNPAARE 124


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SPLLPAATE 9
SPL PAA E
Sbjct: 116 SPLNPAARE 124


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SPLLPAATE 9
SPL PAA E
Sbjct: 116 SPLNPAARE 124


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 1 SPLLPAATE 9
SPL PAA E
Sbjct: 116 SPLNPAARE 124


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SPLLPAATE 9
SPL PAA E
Sbjct: 116 SPLNPAARE 124


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SPLLPAATE 9
SPL PAA E
Sbjct: 116 SPLNPAARE 124


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 3 LLPAATEL 10
+LPAAT++
Sbjct: 48 ILPAATDI 55




285|Sequence|1421|1430|AATELAFHTV

>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 1 AATELAFHTV 10
A TEL F+T+
Sbjct: 373 AKTELRFYTI 382




286|Sequence|1426|1435|AFHTVNCSAL

>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 HTVNCSAL 10
HT+NC+ L
Sbjct: 393 HTLNCTGL 400


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 HTVNCSAL 10
HT+NC+ L
Sbjct: 394 HTLNCTGL 401


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 HTVNCSAL 10
HT+NC+ L
Sbjct: 395 HTLNCTGL 402


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 HTVNCSAL 10
HT+NC+ L
Sbjct: 395 HTLNCTGL 402


>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 1 AFHTVNCSAL 10
A H++NC ++
Sbjct: 134 ALHSLNCDSV 143


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 AFHTVNCSAL 10
A H++NC ++
Sbjct: 134 AIHSLNCDSV 143


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AFHTVNCSAL 10
A H++NC ++
Sbjct: 134 AIHSLNCDSV 143


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AFHTVNCSA 9
AFH CS+
Sbjct: 310 AFHHAGCSS 318


>sp|IORB_METTM|INDOLEPYRUVATE oxidoreductase subunit IorB|Methanothermobacter marburgensis

Query: 1 AFHTVNC 7
F TVNC
Sbjct: 189 GFETVNC 195


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 AFHTVNC 7
AFH V C
Sbjct: 184 AFHEVGC 190


>sp|Y1236_ARCFU|UNCHARACTERIZED protein AF_1236|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AFHTVNCS 8
H VNCS
Sbjct: 91 GLHVVNCS 98




287|Sequence|1431|1440|NCSALNAEEL

>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 CSALNAEEL 10
C+ LN+EEL
Sbjct: 6 CTILNSEEL 14


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 CSALNAEEL 10
C+ LN+EEL
Sbjct: 6 CTILNSEEL 14


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 CSALNAEEL 10
C+ LN+EEL
Sbjct: 6 CTILNSEEL 14


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 2 CSALNAEEL 10
C+ LN+EEL
Sbjct: 6 CTILNSEEL 14


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 CSALNAEEL 10
C+ LN+EEL
Sbjct: 6 CTILNSEEL 14


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 CSALNAEEL 10
C+ LN+EEL
Sbjct: 6 CTILNSEEL 14


>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 CSALNAE 8
CS LNAE
Sbjct: 556 CSVLNAE 562


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 2 CSALNAEE 9
CSAL A+E
Sbjct: 256 CSALAAQE 263


>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NCSALNAEEL 10
NC LN +EL
Sbjct: 134 NCGILNYDEL 143


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 2 CSALNAEEL 10
CS L+ EEL
Sbjct: 243 CSPLSIEEL 251


>sp|CAS4_PYRCJ|CRISPR-ASSOCIATED exonuclease Cas4|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 CSALNAEEL 10
CS +N E+L
Sbjct: 10 CSVVNCEDL 18


>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NCSALNAEEL 10
NC LN +EL
Sbjct: 134 NCGILNYDEL 143




288|Sequence|1436|1445|NAEELRRENG

>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 1 NAEELRRE 8
N++ELRRE
Sbjct: 109 NSDELRRE 116


>sp|PYRE_METTH|OROTATE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 NAEELRRE 8
N EELRRE
Sbjct: 5 NTEELRRE 12


>sp|IDH_ARCFU|ISOCITRATE dehydrogenase [NADP]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NAEELRRENG 10
N E++R ENG
Sbjct: 11 NGEKIRYENG 20


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 2 AEELRREN 9
AEELR++N
Sbjct: 79 AEELRKKN 86


>sp|1A1D_PYRHO|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus horikoshii

Query: 2 AEELRRE 8
AEEL+RE
Sbjct: 141 AEELKRE 147


>sp|Y1841_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus

Query: 1 NAEELRRENG 10
N EE+RR+ G
Sbjct: 76 NVEEIRRKIG 85


>sp|GUAAB_METKA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanopyrus kandleri

Query: 3 EELRRENG 10
EELRRE G
Sbjct: 13 EELRREIG 20


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 LRRENG 10
LRRENG
Sbjct: 286 LRRENG 291


>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 AEELRRE 8
A+ELRRE
Sbjct: 27 ADELRRE 33


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 NAEELRRE 8
+ EELRRE
Sbjct: 398 DVEELRRE 405




289|Sequence|1441|1450|RRENGLEVLQ

>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 1 RRENGLEVLQ 10
RRE GL++++
Sbjct: 10 RREKGLKIIK 19


>sp|PYRE_PYRCJ|OROTATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 RRENGLEVL 9
RRE G+EV
Sbjct: 151 RRETGVEVF 159


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 2 RENGLEVLQ 10
R+NGLEV++
Sbjct: 330 RKNGLEVVK 338


>sp|RPIA_METTH|RIBOSE-5-PHOSPHATE isomerase A|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 RENGLEVL 9
RE GLEV+
Sbjct: 45 REEGLEVM 52


>sp|RPIA_THEAC|RIBOSE-5-PHOSPHATE isomerase A|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RENGLEVLQ 10
++NG+EV+Q
Sbjct: 65 KQNGIEVIQ 73


>sp|TSR3_METTH|16S rRNA aminocarboxypropyltransferase|Methanothermobacter

Query: 1 RRENGLEVLQ 10
R EN LEV++
Sbjct: 152 RAENSLEVVE 161


>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 2 RENGLE 7
RENGLE
Sbjct: 88 RENGLE 93


>sp|NADA_METKA|QUINOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 RRENGLEVL 9
RRE G EV+
Sbjct: 229 RRETGTEVI 237


>sp|CSG_HALMA|CELL surface glycoprotein|Haloarcula marismortui (strain ATCC 43049

Query: 3 ENGLEV 8
ENGLEV
Sbjct: 181 ENGLEV 186


>sp|PDXS_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Hyperthermus butylicus (strain

Query: 3 ENGLEVL 9
ENGLEV+
Sbjct: 29 ENGLEVI 35


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RENGLEV 8
R+NGLEV
Sbjct: 18 RKNGLEV 24


>sp|IF2B_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 2 RENGLEVLQ 10
+ENG EVL+
Sbjct: 114 KENGAEVLR 122


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 1 RRENGLEVL 9
R +NGLEV+
Sbjct: 90 RGDNGLEVI 98


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RRENGLEV 8
R+E GLE+
Sbjct: 912 RKETGLEI 919


>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RRENGLEVLQ 10
RRE GLE ++
Sbjct: 442 RREKGLEPIK 451


>sp|DNLI_METTP|DNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RENGLEV 8
+ENG+EV
Sbjct: 483 KENGMEV 489


>sp|PYRB_METMJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanoculleus marisnigri

Query: 2 RENGLEVLQ 10
RE G+EV++
Sbjct: 195 RERGMEVVE 203




290|Sequence|1446|1455|LEVLQEAFSR

>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LEVLQEAFSR 10
LEV+ EAF R
Sbjct: 292 LEVMSEAFDR 301


>sp|AATE_METTH|A-TYPE ATP synthase subunit E|Methanothermobacter thermautotrophicus

Query: 2 EVLQEAFSR 10
EV+QEAF +
Sbjct: 82 EVIQEAFKK 90


>sp|TF2B_PYRAB|TRANSCRIPTION initiation factor IIB|Pyrococcus abyssi (strain GE5 /

Query: 1 LEVLQEAFSR 10
+E+L+EA+ R
Sbjct: 230 IEILEEAYKR 239


>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 1 LEVLQEAFSR 10
+E+L+EA+ R
Sbjct: 230 IEILEEAYQR 239


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LEVLQEAFSR 10
+E+L+EA+ R
Sbjct: 230 IEILEEAYRR 239


>sp|TF2B_PYRWO|TRANSCRIPTION initiation factor IIB|Pyrococcus woesei

Query: 1 LEVLQEAFSR 10
+E+L EA+ R
Sbjct: 230 IEILDEAYKR 239


>sp|TF2B_PYRFU|TRANSCRIPTION initiation factor IIB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LEVLQEAFSR 10
+E+L EA+ R
Sbjct: 230 IEILDEAYKR 239


>sp|METE_SACI1|METHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 EVLQEAFS 9
E LQEAFS
Sbjct: 36 EDLQEAFS 43


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 EVLQEAFSR 10
EVL+E F R
Sbjct: 1309 EVLEEIFGR 1317




291|Sequence|1451|1460|EAFSRCVAVL

>sp|HLY_HALMT|HALOLYSIN mediterranei (strain ATCC 33500

Query: 2 AFSRCVAV 9
A+S CVAV
Sbjct: 295 AYSECVAV 302


>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 EAFSRCVAV 9
++F+RCV V
Sbjct: 371 DSFARCVPV 379


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EAFSRCVAVL 10
EAF +AVL
Sbjct: 257 EAFENAIAVL 266




292|Sequence|1456|1465|CVAVLTRASK

>sp|MTRA_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina acetivorans (strain

Query: 1 CVAVLTRAS 9
CVAV+T AS
Sbjct: 26 CVAVITCAS 34


>sp|MTRA_METMS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanohalophilus mahii (strain

Query: 1 CVAVLTRAS 9
CVAV+T S
Sbjct: 26 CVAVITLGS 34




293|Sequence|1461|1470|TRASKPSDMS

***** No hits found ******


294|Sequence|1466|1475|PSDMSVQVCG

>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PSDMSVQV 8
PSD+SVQV
Sbjct: 225 PSDVSVQV 232


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PSDMSVQV 8
PSD++VQV
Sbjct: 235 PSDVAVQV 242


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PSDMSVQV 8
PSD++VQV
Sbjct: 231 PSDIAVQV 238


>sp|FDHD_THEVO|SULFUR carrier protein FdhD|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PSDMSVQVC 9
PS ++++VC
Sbjct: 244 PSSLAIEVC 252


>sp|HIS7_ARCFU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSDMSVQVCG 10
P D +V +CG
Sbjct: 86 PMDDAVAICG 95


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 1 PSDMSVQVCG 10
P D+ V VCG
Sbjct: 260 PPDVHVVVCG 269


>sp|MCH_METHJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 SVQVCG 10
S+QVCG
Sbjct: 177 SIQVCG 182


>sp|TRPD_METST|ANTHRANILATE phosphoribosyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 PSDMSVQVCG 10
P D ++ CG
Sbjct: 73 PEDYLIETCG 82


>sp|CHED2_METAC|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina acetivorans

Query: 2 SDMSVQVCG 10
SD+S +CG
Sbjct: 99 SDVSTGICG 107


>sp|FNO_METJA|F420-DEPENDENT NADP reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PSDMSVQVCG 10
P D + VCG
Sbjct: 153 PVDCDILVCG 162


>sp|METE_METTM|METHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 DMSVQVCG 10
D+S+ VCG
Sbjct: 197 DVSLHVCG 204


>sp|CHED1_METMA|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina mazei (strain

Query: 2 SDMSVQVCG 10
SD+S +CG
Sbjct: 99 SDVSTGICG 107




295|Sequence|1471|1480|VQVCGYISKC

>sp|RS8_META3|SMALL ribosomal subunit protein uS8|Methanococcus aeolicus (strain ATCC

Query: 1 VQVCGYISKC 10
V++ G+I+KC
Sbjct: 63 VELTGHINKC 72


>sp|NTPTH_PYRAE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VQVCGYIS 8
V+VCG+++
Sbjct: 36 VKVCGFVT 43


>sp|RS3_METS3|SMALL ribosomal subunit protein uS3|Methanobrevibacter smithii (strain

Query: 3 VCGYISKC 10
V GYI KC
Sbjct: 146 VEGYIKKC 153


>sp|SRP19_METM7|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C7

Query: 2 QVCGYI 7
++CGYI
Sbjct: 62 EICGYI 67


>sp|RS3_METTH|SMALL ribosomal subunit protein uS3|Methanothermobacter

Query: 5 GYISKC 10
GYI KC
Sbjct: 148 GYIKKC 153


>sp|RS3_METST|SMALL ribosomal subunit protein uS3|Methanosphaera stadtmanae (strain

Query: 5 GYISKC 10
GYI KC
Sbjct: 148 GYIKKC 153


>sp|RS17_METMP|SMALL ribosomal subunit protein uS17|Methanococcus maripaludis (strain

Query: 2 QVCGYISK 9
+V GYISK
Sbjct: 51 EVTGYISK 58


>sp|RS17_METVA|SMALL ribosomal subunit protein uS17|Methanococcus vannielii

Query: 2 QVCGYISK 9
+V GYISK
Sbjct: 51 EVTGYISK 58


>sp|SRP19_METM5|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C5

Query: 2 QVCGYI 7
++CGYI
Sbjct: 62 EICGYI 67


>sp|Y584_METJA|UPF0718 protein MJ0584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VCGYIS 8
+CGYI+
Sbjct: 355 ICGYIA 360


>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 2 QVCGYI 7
+VCGY+
Sbjct: 27 KVCGYV 32


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 VQVCGYI 7
V CGYI
Sbjct: 795 VSACGYI 801


>sp|SRP19_METM6|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C6

Query: 2 QVCGYI 7
++CGYI
Sbjct: 62 EICGYI 67


>sp|PYRI_STAMF|ASPARTATE carbamoyltransferase regulatory chain|Staphylothermus marinus

Query: 2 QVCGYISK 9
Q CGY+ K
Sbjct: 147 QYCGYVLK 154


>sp|SRP19_METMP|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain DSM

Query: 2 QVCGYI 7
++CGYI
Sbjct: 62 EICGYI 67


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 1 VQVCGYISK 9
V++CG++ K
Sbjct: 23 VKLCGWVRK 31


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 1 VQVCGYISKC 10
V+ C Y KC
Sbjct: 477 VEKCVYCKKC 486




296|Sequence|1476|1485|YISKCYSVAA

>sp|RS7_METHJ|SMALL ribosomal subunit protein uS7|Methanospirillum hungatei JF-1

Query: 4 KCYSVA 9
KCYSVA
Sbjct: 176 KCYSVA 181


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YISKCYSV 8
YISKC +V
Sbjct: 50 YISKCGTV 57


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YISKCYSV 8
YISKC +V
Sbjct: 50 YISKCGAV 57


>sp|RS7_METB6|SMALL ribosomal subunit protein uS7|Methanoregula boonei (strain DSM

Query: 3 SKCYSVA 9
+KCYSV
Sbjct: 185 AKCYSVG 191




297|Sequence|1481|1490|YSVAAQFEEC

>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 2 SVAAQFEEC 10
+++A+FE+C
Sbjct: 361 NISAEFEDC 369


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SVAAQFEEC 10
+++A+FE+C
Sbjct: 361 NISAEFEDC 369


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM 6242

Query: 3 VAAQFEEC 10
++A+FE+C
Sbjct: 360 ISAEFEDC 367


>sp|MTRA2_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter

Query: 2 SVAAQFEEC 10
S+AA+ +EC
Sbjct: 146 SIAARIQEC 154


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 2 SVAAQFEEC 10
+++A+FE+C
Sbjct: 361 NMSAEFEDC 369


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YSVAAQFEEC 10
Y +AA E+C
Sbjct: 110 YGIAAFIEQC 119


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 2 SVAAQFEEC 10
SV+A FE C
Sbjct: 163 SVSAVFEPC 171


>sp|RIO1_ARCFU|RIO-TYPE serine/threonine-protein kinase Rio1|Archaeoglobus fulgidus (strain

Query: 1 YSVAAQFEE 9
Y V A FEE
Sbjct: 242 YGVKADFEE 250


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 YSVAAQFEEC 10
Y VA EEC
Sbjct: 110 YGVAKFIEEC 119




298|Sequence|1486|1495|QFEECREKIT

>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QFEECREKIT 10
Q ++CREKI+
Sbjct: 92 QIKKCREKIS 101


>sp|RL18_METTP|LARGE ribosomal subunit protein uL18|Methanothrix thermoacetophila

Query: 1 QFEECREKI 9
QFE REKI
Sbjct: 159 QFEAAREKI 167


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 1 QFEECREKIT 10
Q + CREKI+
Sbjct: 92 QIKRCREKIS 101


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QFEECREKI 9
++EE REKI
Sbjct: 200 EYEEAREKI 208


>sp|ARE_SACSO|ARYLESTERASE solfataricus (Sulfolobus solfataricus)

Query: 1 QFEECREKI 9
QF+E R+K+
Sbjct: 26 QFQEIRQKV 34


>sp|VAPC6_METJA|RIBONUCLEASE VapC6|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FEECREKI 9
+EE REKI
Sbjct: 78 YEEVREKI 85


>sp|RL18_METAC|LARGE ribosomal subunit protein uL18|Methanosarcina acetivorans (strain

Query: 1 QFEECREKI 9
QFE +EKI
Sbjct: 161 QFEATKEKI 169


>sp|RHMD_CALMQ|PUTATIVE L-rhamnonate dehydratase|Caldivirga maquilingensis (strain ATCC

Query: 2 FEECREKI 9
F+E REK+
Sbjct: 205 FKEAREKV 212


>sp|RL18_META3|LARGE ribosomal subunit protein uL18|Methanococcus aeolicus (strain ATCC

Query: 1 QFEECREKI 9
FEE +EKI
Sbjct: 183 HFEEIKEKI 191


>sp|RL18_METMA|LARGE ribosomal subunit protein uL18|Methanosarcina mazei (strain ATCC

Query: 1 QFEECREKI 9
QFE +EKI
Sbjct: 161 QFEATKEKI 169


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 QFEECREKIT 10
QFE+ + KIT
Sbjct: 849 QFEQAQAKIT 858


>sp|Y1954_ARCFU|PUTATIVE amidase AF_1954|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EECREKI 9
EEC EKI
Sbjct: 23 EECLEKI 29


>sp|RL18_METBF|LARGE ribosomal subunit protein uL18|Methanosarcina barkeri (strain

Query: 1 QFEECREKI 9
QFE +EKI
Sbjct: 161 QFEATKEKI 169


>sp|MOAA_METTH|PROBABLE GTP 3',8-cyclase|Methanothermobacter thermautotrophicus (strain

Query: 2 FEECREK 8
FE CREK
Sbjct: 171 FEFCREK 177




299|Sequence|1491|1500|REKITEMPSI

>sp|Y341_METJA|UNCHARACTERIZED protein MJ0341|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 REKITEMPSI 10
+EK+ E+PSI
Sbjct: 82 KEKVEELPSI 91


>sp|DNAG_ARCFU|DNA primase DnaG|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 REKITEMP 8
REK+ EMP
Sbjct: 294 REKLAEMP 301


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 REKITEMPSI 10
++KI EMP+I
Sbjct: 504 KDKIGEMPNI 513


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 REKITEM 7
RE+ITEM
Sbjct: 452 REQITEM 458


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 1 REKITEM 7
RE+ITEM
Sbjct: 452 REQITEM 458


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 1 REKITEMPSI 10
REKI E P++
Sbjct: 97 REKIREHPAV 106


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 REKITEMPSI 10
REKI E P++
Sbjct: 97 REKIREHPAV 106


>sp|FLUC_NITMS|FLUORIDE-SPECIFIC ion channel FluC|Nitrosopumilus maritimus (strain SCM1)

Query: 1 REKITEMPSI 10
R KITE P I
Sbjct: 20 RYKITESPLI 29


>sp|NURA_SACS2|DNA double-strand break repair nuclease|Saccharolobus solfataricus

Query: 2 EKITEMPSI 10
EKI+E+P I
Sbjct: 240 EKISEIPEI 248


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 1 REKITEMPSI 10
REK+ E P++
Sbjct: 97 REKVREHPAV 106


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 REKITEMPSI 10
REK+ E P++
Sbjct: 97 REKVREHPAV 106


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EKITEMPSI 10
EKI E+P+I
Sbjct: 508 EKIKEIPNI 516




300|Sequence|1496|1505|EMPSIIKDLC

>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EMPSIIKDL 9
E+PSI+K+L
Sbjct: 545 ELPSILKEL 553


>sp|THYX_PYRAE|FLAVIN-DEPENDENT thymidylate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EMPSIIKDLC 10
++PS+ +D C
Sbjct: 199 DLPSLHRDFC 208


>sp|RISB_METMA|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EMPSIIKDLC 10
+MP IK LC
Sbjct: 46 DMPLAIKKLC 55


>sp|RISB_METBF|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EMPSIIKDLC 10
+MP IK LC
Sbjct: 46 DMPLAIKKLC 55


>sp|RISB_METAC|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EMPSIIKDLC 10
+MP IK LC
Sbjct: 46 DMPLAIKKLC 55


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EMPSIIKDL 9
E+PS++K+L
Sbjct: 151 EVPSLLKEL 159


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EMPSIIKDL 9
EMPSII +
Sbjct: 527 EMPSIISHI 535


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii (strain

Query: 1 EMPSIIKD 8
E+P +IKD
Sbjct: 313 EIPQLIKD 320


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PSIIKDLC 10
P IIK+LC
Sbjct: 270 PVIIKNLC 277


>sp|Y1428_METMA|UPF0228 protein MM_1428|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EMPSIIKD 8
+MP ++KD
Sbjct: 84 DMPDVVKD 91


>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 3 PSIIKDLC 10
P+++K+LC
Sbjct: 200 PNVLKELC 207


>sp|Y1081_ARCFU|UNCHARACTERIZED protein AF_1081|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EMPSIIKDLC 10
E+PSI+K++
Sbjct: 17 ELPSILKEVI 26




301|Sequence|1501|1510|IKDLCRVLYF

>sp|G3P_METJA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LCRVLY 9
LCR+LY
Sbjct: 149 LCRILY 154


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LCRVLY 9
LCRV+Y
Sbjct: 146 LCRVIY 151


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LCRVLY 9
LCRV+Y
Sbjct: 146 LCRVIY 151


>sp|PYLD_METBF|PYRROLYSINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IKDLCRVLY 9
IK +C+ LY
Sbjct: 35 IKGICKALY 43


>sp|CAS7_THETK|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Thermoproteus tenax (strain ATCC 35583

Query: 1 IKDLCRVLY 9
IKDLC L+
Sbjct: 102 IKDLCNDLH 110


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKDLCRVL 8
+KD C VL
Sbjct: 463 LKDFCNVL 470


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IKDLCRV 7
+KDLC V
Sbjct: 477 LKDLCNV 483


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 2 KDLCRVLY 9
K+LC++++
Sbjct: 201 KELCKIIF 208


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 2 KDLCRVLYF 10
KDLC +Y+
Sbjct: 8 KDLCIDMYY 16




302|Sequence|1506|1515|RVLYFGKSIP

>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 1 RVLYFGKSI 9
RVLY GKSI
Sbjct: 25 RVLYVGKSI 33


>sp|PSTB_SACS2|PHOSPHATE import ATP-binding protein PstB|Saccharolobus solfataricus

Query: 1 RVLYFGKSI 9
+VLYFGK I
Sbjct: 72 KVLYFGKDI 80


>sp|UVRC_HALSA|UVRABC system protein C|Halobacterium salinarum (strain ATCC 700922

Query: 1 RVLYFGKSI 9
RVLY GK++
Sbjct: 35 RVLYVGKAV 43


>sp|UVRC_HALS3|UVRABC system protein C|Halobacterium salinarum (strain ATCC 29341

Query: 1 RVLYFGKSI 9
RVLY GK++
Sbjct: 35 RVLYVGKAV 43


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 1 RVLYFGKSI 9
RVLY GK++
Sbjct: 31 RVLYVGKAV 39


>sp|Y1534_PYRCJ|UPF0284 protein Pcal_1534|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VLYFGKSIP 10
V+Y G+SIP
Sbjct: 134 VVYLGESIP 142


>sp|PCNA2_SACS2|DNA polymerase sliding clamp 2|Saccharolobus solfataricus (strain ATCC

Query: 3 LYFGKSIP 10
LYFG IP
Sbjct: 216 LYFGSQIP 223


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVLYFGKSIP 10
+V+YFG+ P
Sbjct: 493 KVIYFGEGSP 502


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 YFGKSIP 10
Y+GK IP
Sbjct: 226 YYGKEIP 232


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 RVLYFGKSIP 10
RVL F + IP
Sbjct: 409 RVLMFDREIP 418


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LYFGKSIP 10
+YF K+IP
Sbjct: 144 VYFDKTIP 151


>sp|MCRW_METFV|METHYL-COENZYME M reductase II operon|Methanothermus fervidus (strain ATCC 43054

Query: 1 RVLYFGKSIP 10
RVL G SIP
Sbjct: 40 RVLVHGPSIP 49


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VLYFGKS 8
VLYFGK
Sbjct: 175 VLYFGKE 181


>sp|MCRW_METTH|METHYL-COENZYME M reductase II operon|Methanothermobacter thermautotrophicus

Query: 1 RVLYFGKSIP 10
RVL G SIP
Sbjct: 38 RVLVHGPSIP 47


>sp|Y372_PYRAE|UPF0284 protein PAE0372|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LYFGKSIP 10
+Y G+SIP
Sbjct: 135 IYIGESIP 142


>sp|MCRC_METBF|METHYL-COENZYME M reductase operon protein|Methanosarcina barkeri (strain Fusaro

Query: 2 VLYFGKSIP 10
VLY G IP
Sbjct: 72 VLYSGSGIP 80


>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 2 VLYFGKSIP 10
V+Y GK +P
Sbjct: 778 VVYEGKEVP 786




303|Sequence|1511|1520|GKSIPRVAAL

>sp|RNH2_PYRIL|RIBONUCLEASE HII|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GKSIPRVAA 9
G+S+P+VAA
Sbjct: 128 GESVPQVAA 136


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 KSIPRVAA 9
KS+PRV A
Sbjct: 1291 KSVPRVVA 1298


>sp|RNH2_PYRNV|RIBONUCLEASE HII|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GKSIPRVAA 9
G+S+P+VAA
Sbjct: 131 GESVPQVAA 139


>sp|RL6_METKA|LARGE ribosomal subunit protein uL6|Methanopyrus kandleri (strain AV19 /

Query: 1 GKSIPRVAAL 10
G+++PRVA +
Sbjct: 134 GENVPRVAEI 143


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro

Query: 1 GKSIPRVAAL 10
GK +P+VA L
Sbjct: 80 GKKLPKVAIL 89


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GKSIPRVAAL 10
GK +P +AAL
Sbjct: 387 GKKLPAIAAL 396


>sp|GATD_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina acetivorans (strain

Query: 1 GKSIPRVAAL 10
GK +P++A L
Sbjct: 80 GKKLPKIAIL 89


>sp|Y1235_METTH|UNCHARACTERIZED protein MTH_1235|Methanothermobacter thermautotrophicus (strain

Query: 4 IPRVAAL 10
+PRVAAL
Sbjct: 139 LPRVAAL 145


>sp|FILR2_METH6|PROBABLE methanogenesis regulatory protein FilR2|Methanothrix harundinacea

Query: 1 GKSIPRVAAL 10
G+S+PR+ L
Sbjct: 65 GRSLPRMVLL 74


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KSIPRVA 8
KSIPRV+
Sbjct: 261 KSIPRVS 267


>sp|RNH2_PYRAR|RIBONUCLEASE HII|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GKSIPRVAA 9
G+++P+VAA
Sbjct: 131 GEAVPQVAA 139


>sp|RL15E_METB6|LARGE ribosomal subunit protein eL15|Methanoregula boonei (strain DSM

Query: 1 GKSIPRVA 8
GKSI R+A
Sbjct: 95 GKSIQRIA 102


>sp|RNH2_PYRAE|RIBONUCLEASE HII|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GKSIPRVAA 9
G+++P+VAA
Sbjct: 128 GEAVPQVAA 136


>sp|RL15E_METHJ|LARGE ribosomal subunit protein eL15|Methanospirillum hungatei JF-1

Query: 1 GKSIPRVA 8
GKSI R+A
Sbjct: 95 GKSIQRIA 102




304|Sequence|1516|1525|RVAALGVECV

>sp|IF6_THEPD|TRANSLATION initiation factor 6|Thermofilum pendens (strain DSM 2475

Query: 1 RVA-ALGVECV 10
R+A ALGVEC+
Sbjct: 127 RIADALGVECI 137


>sp|Y821_METMA|UPF0292 protein MM_0821|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RVAALGVECV 10
RVA+LG E +
Sbjct: 65 RVASLGCEVI 74


>sp|DDH_HALMT|D-2-HYDROXYACID dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 1 RVAALGVECV 10
R AALG+E V
Sbjct: 153 RAAALGMEVV 162


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 5 LGVECV 10
LGVEC+
Sbjct: 32 LGVECI 37


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 5 LGVECV 10
LG+ECV
Sbjct: 33 LGIECV 38


>sp|AIPS_METTH|ARCHAETIDYLINOSITOL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 RVAALGVEC 9
R +LG+EC
Sbjct: 131 RAESLGIEC 139


>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 3 AALGVECV 10
A LG+EC+
Sbjct: 135 AKLGLECI 142


>sp|AROE_METMA|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 AALGVECV 10
+ALG++C+
Sbjct: 26 SALGMDCI 33


>sp|Y640_METJA|UNCHARACTERIZED protein MJ0640|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VAALGVECV 10
+AA+G +CV
Sbjct: 90 IAAMGGKCV 98


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 5 LGVECV 10
LG+EC+
Sbjct: 33 LGIECI 38




305|Sequence|1521|1530|GVECVSSFAV

>sp|AROC_THEAC|CHORISMATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VECVSSFAV 10
VEC++SF +
Sbjct: 334 VECLTSFVL 342


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 2 VECVSSFA 9
+ECV++FA
Sbjct: 577 MECVNTFA 584


>sp|AROK_METTH|SHIKIMATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GVECVS 6
GVEC+S
Sbjct: 44 GVECIS 49




306|Sequence|1526|1535|SSFAVDFWLQ

>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii (strain

Query: 4 AVDFWLQ 10
AVD WLQ
Sbjct: 166 AVDTWLQ 172


>sp|COFC_METPE|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 SSFAVDFWLQ 10
SSFA D++ Q
Sbjct: 130 SSFATDYYGQ 139


>sp|CAS1C_METRM|CRISPR-ASSOCIATED protein Cas1 3|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 SFAVDFWL 9
S +VD+WL
Sbjct: 167 SASVDYWL 174


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 SSFAVDFWLQ 10
+S+A ++W+Q
Sbjct: 448 ASYAPEWWIQ 457


>sp|SFSA_SACS2|SUGAR fermentation stimulation protein homolog|Saccharolobus solfataricus

Query: 3 FAVDFW 8
F+V+FW
Sbjct: 200 FSVEFW 205


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 SSFAVDFWLQ 10
+SF ++W+Q
Sbjct: 422 ASFTKEWWMQ 431


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans (strain

Query: 4 AVDFW 8
A+DFW
Sbjct: 418 AIDFW 422




307|Sequence|1531|1540|DFWLQTHLFQ

>sp|MPTA_THEKO|GTP cyclohydrolase MptA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DFWLQTHL 8
+ W++THL
Sbjct: 105 EVWIKTHL 112


>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WLQTHLF 9
WLQ H++
Sbjct: 80 WLQNHIW 86


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 3 WLQTHLF 9
WL H+F
Sbjct: 244 WLSEHMF 250


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 3 WLQTHLF 9
WLQ H++
Sbjct: 83 WLQEHIW 89


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 3 WLQTHLF 9
WLQ H++
Sbjct: 80 WLQDHIW 86


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WLQTHLF 9
WL H+F
Sbjct: 244 WLSEHMF 250


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 WLQTHL 8
WL+TH+
Sbjct: 715 WLKTHM 720


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WLQTHLF 9
WL H+F
Sbjct: 241 WLSEHMF 247


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 3 WLQTHLF 9
WL H+F
Sbjct: 241 WLSEHMF 247


>sp|Y2132_ARCFU|UNCHARACTERIZED protein AF_2132|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DFWLQTHLF 9
+FW+ HLF
Sbjct: 158 NFWIWIHLF 166


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WLQTHLF 9
WL H+F
Sbjct: 246 WLSEHMF 252




308|Sequence|1536|1545|THLFQAGILW

>sp|LEUC_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HLFQAGILW 10
H+F G LW
Sbjct: 145 HVFATGKLW 153


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 3 LFQAGILW 10
L QAG LW
Sbjct: 275 LIQAGPLW 282


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 THLFQAG 7
TH++QAG
Sbjct: 627 THIWQAG 633


>sp|GFCR_METVS|TRANSCRIPTIONAL regulator GfcR|Methanococcus vannielii (strain ATCC 35089

Query: 2 HLFQAGIL 9
HLF+ GI+
Sbjct: 194 HLFRTGIV 201


>sp|DPCKG_METMA|GTP-DEPENDENT dephospho-CoA kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HLFQAGIL 9
HL +AGI+
Sbjct: 54 HLLEAGII 61


>sp|DPCKG_METAC|GTP-DEPENDENT dephospho-CoA kinase|Methanosarcina acetivorans (strain ATCC

Query: 2 HLFQAGIL 9
HL +AGI+
Sbjct: 54 HLLEAGII 61




309|Sequence|1541|1550|AGILWYLLGF

>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LWYLLGF 10
LWYL+G+
Sbjct: 479 LWYLIGY 485


>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AGILWYLLGF 10
+GI++Y LGF
Sbjct: 316 SGIVFYALGF 325


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 4 LWYLLGF 10
+WY LGF
Sbjct: 328 IWYHLGF 334


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 4 LWYLLGF 10
+WY LGF
Sbjct: 312 IWYHLGF 318


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LWYLLGF 10
+WY LGF
Sbjct: 312 IWYHLGF 318


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 4 LWYLLGF 10
+WY LGF
Sbjct: 311 IWYHLGF 317


>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 4 LWYLLGF 10
LW L+GF
Sbjct: 246 LWILVGF 252


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 WYLLGF 10
WY +GF
Sbjct: 357 WYAMGF 362


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 2 GILWYLLGF 10
G+L+ LLGF
Sbjct: 395 GVLYALLGF 403


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 AGILWYLLGF 10
AG+L L+GF
Sbjct: 831 AGVLCRLIGF 840


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 AGILWYLLGF 10
AG+L L+GF
Sbjct: 869 AGVLGRLIGF 878


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 AGILWYLLGF 10
AG+L L+GF
Sbjct: 867 AGVLGRLIGF 876


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 AGILWYLLGF 10
AG+L L+GF
Sbjct: 863 AGVLGRLIGF 872


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 AGILWYLLGF 10
AG+L L+GF
Sbjct: 862 AGVLGRLIGF 871


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AGILWYLLG 9
AG++W LG
Sbjct: 492 AGLIWSQLG 500


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 ILWYLLGF 10
++W+ GF
Sbjct: 2 VIWFFYGF 9


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 AGILWYLLGF 10
AG+L L+GF
Sbjct: 842 AGVLVRLIGF 851


>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GILWY 6
GI+WY
Sbjct: 191 GIIWY 195


>sp|CYDE_METJA|L-CYSTEINE desulfidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AGILWYLLGF 10
+G+ +Y+ GF
Sbjct: 294 SGLSYYIFGF 303


>sp|AGOG_PYRHO|N-GLYCOSYLASE/DNA lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ILWYLLG 9
ILW LLG
Sbjct: 210 ILWPLLG 216


>sp|Y347_METJA|UNCHARACTERIZED protein MJ0347|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GILWYLLGF 10
G W+ +G+
Sbjct: 143 GFFWFAIGY 151


>sp|Y1031_METJA|UNCHARACTERIZED transporter MJ1031|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AGILWYLLG 9
GIL YLLG
Sbjct: 77 VGILAYLLG 85


>sp|AGOG_PYRAB|N-GLYCOSYLASE/DNA lyase|Pyrococcus abyssi (strain GE5 /

Query: 3 ILWYLLG 9
ILW LLG
Sbjct: 210 ILWPLLG 216




310|Sequence|1546|1555|YLLGFLFNYD

>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 FLFNYD 10
FLFNYD
Sbjct: 244 FLFNYD 249


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YLLGFLFNYD 10
Y+L + FNYD
Sbjct: 543 YVLDYRFNYD 552


>sp|APGM_IGNH4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YLLGFLFNY 9
Y+LG+L +Y
Sbjct: 331 YVLGYLLDY 339


>sp|RL18_THEPD|LARGE ribosomal subunit protein uL18|Thermofilum pendens (strain DSM

Query: 1 YLLGFL 6
YLLGFL
Sbjct: 83 YLLGFL 88


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 1 YLLGFLFNY 9
Y+LGF+ N+
Sbjct: 474 YILGFIVNW 482


>sp|COBQ_THEON|PROBABLE cobyric acid synthase|Thermococcus onnurineus (strain NA1)

Query: 2 LLGFLFN 8
+LGF+FN
Sbjct: 191 ILGFVFN 197


>sp|Y3524_METJA|UNCHARACTERIZED protein MJECL24|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLGFLFN 8
+LGF+FN
Sbjct: 183 VLGFIFN 189


>sp|HTPX_PYRCJ|PROTEASE HtpX homolog|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YLLGFLFNY 9
Y+LG+LF +
Sbjct: 13 YMLGYLFMF 21




311|Sequence|1551|1560|LFNYDYTLEE

>sp|RS4_CENSY|SMALL ribosomal subunit protein uS4|Cenarchaeum symbiosum (strain A)

Query: 2 FNYDYTLEE 10
FNYD +EE
Sbjct: 18 FNYDLKMEE 26


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5

Query: 2 FNYDYTLE 9
NYDY LE
Sbjct: 75 LNYDYQLE 82


>sp|DCUP_THEAC|UROPORPHYRINOGEN decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LFNYDYTLEE 10
+ NYDY L E
Sbjct: 281 IVNYDYALHE 290


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LFNYDYTLEE 10
+F+YD LEE
Sbjct: 203 VFSYDRLLEE 212


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LFNYDYTLE 9
+F YDYT++
Sbjct: 396 VFRYDYTIQ 404


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 NYDYTLE 9
N+DY LE
Sbjct: 206 NWDYVLE 212


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 NYDYTLE 9
N+DY LE
Sbjct: 206 NWDYVLE 212


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 NYDYTLE 9
N+DY LE
Sbjct: 206 NWDYVLE 212


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 NYDYTLE 9
N+DY LE
Sbjct: 206 NWDYVLE 212


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 NYDYTLE 9
N+DY LE
Sbjct: 206 NWDYVLE 212


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 FNYDYTLEE 10
+ YD+T+EE
Sbjct: 535 YVYDFTVEE 543


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FNYDYTL 8
FNYDY +
Sbjct: 549 FNYDYII 555


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 5 DYTLEE 10
DYT+EE
Sbjct: 164 DYTIEE 169


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 5 DYTLEE 10
DYT+EE
Sbjct: 164 DYTIEE 169


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 DYTLEE 10
DYT+EE
Sbjct: 167 DYTIEE 172


>sp|NADK_METST|NAD kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LFNYDYTLEE 10
L +YD+ +EE
Sbjct: 109 LLSYDFFIEE 118


>sp|CAPPA_HALSA|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FNYDYTLE 9
F YDY +E
Sbjct: 291 FKYDYPVE 298


>sp|CAPPA_HALS3|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 2 FNYDYTLE 9
F YDY +E
Sbjct: 291 FKYDYPVE 298


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FNYDYTLE 9
FN DYT++
Sbjct: 411 FNLDYTVQ 418


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LFNYDYTLEE 10
LF YD +EE
Sbjct: 1622 LFRYDDGIEE 1631




312|Sequence|1556|1565|YTLEESGIQK

>sp|ENGB_HALSA|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC

Query: 1 YTLEESGIQ 9
Y LEE G+Q
Sbjct: 126 YLLEELGVQ 134


>sp|ENGB_HALS3|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC 29341

Query: 1 YTLEESGIQ 9
Y LEE G+Q
Sbjct: 126 YLLEELGVQ 134


>sp|SFSA_CALMQ|SUGAR fermentation stimulation protein homolog|Caldivirga maquilingensis

Query: 2 TLEESGIQK 10
TLEE G+ K
Sbjct: 135 TLEEDGVAK 143


>sp|RL30E_METHJ|LARGE ribosomal subunit protein eL30|Methanospirillum hungatei JF-1

Query: 1 YTLEESGIQ 9
YT E SG+Q
Sbjct: 58 YTYEGSGVQ 66




313|Sequence|1561|1570|SGIQKSEETN

***** No hits found ******


314|Sequence|1566|1575|SEETNQQEVA

***** No hits found ******


315|Sequence|1571|1580|QQEVANSLAK

>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 QQEVANSLA 9
+Q+VANSL
Sbjct: 292 RQQVANSLG 300


>sp|BIOW_METVS|6-CARBOXYHEXANOATE--COA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 QEVANSLAK 10
+E+ANSL K
Sbjct: 28 EEIANSLIK 36




316|Sequence|1576|1585|NSLAKLSVHA

>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LAKLSVHA 10
LAKL++HA
Sbjct: 311 LAKLALHA 318




317|Sequence|1581|1590|LSVHALSRLG

>sp|THI4_HALSA|THIAMINE thiazole synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SVHALSRLG 10
+VH L+R+G
Sbjct: 261 TVHGLTRMG 269


>sp|THI4_HALS3|THIAMINE thiazole synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 SVHALSRLG 10
+VH L+R+G
Sbjct: 261 TVHGLTRMG 269


>sp|PSB2_HALMA|PROTEASOME subunit beta 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 LSVHALSRLG 10
LS+HAL+ L
Sbjct: 110 LSIHALATLA 119




318|Sequence|1586|1595|LSRLGGYLAE

>sp|Y2214_ARCFU|UNCHARACTERIZED protein AF_2214|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSRLGGYL 8
++RLGGYL
Sbjct: 102 IARLGGYL 109


>sp|Y3058_HALWD|PUTATIVE HTH-type transcriptional regulatory protein|Haloquadratum walsbyi

Query: 1 LSRLGGYL 8
+ RLGGYL
Sbjct: 62 MRRLGGYL 69


>sp|Y1641_METJA|UNCHARACTERIZED protein MJ1641|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSRLGGYLA 9
L RLG Y+A
Sbjct: 158 LERLGDYIA 166


>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 1 LSRLGGYLAE 10
L RLGG +AE
Sbjct: 255 LLRLGGEIAE 264


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 4 LGGYLAE 10
LGGY+A+
Sbjct: 313 LGGYMAQ 319


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 3 RLGGYLA 9
RLGG++A
Sbjct: 47 RLGGFMA 53




319|Sequence|1591|1600|GYLAEEQATP

>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYLAEEQA 8
GYL+EE+A
Sbjct: 47 GYLSEEEA 54


>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YLAEEQATP 10
Y AEE ATP
Sbjct: 42 YRAEELATP 50


>sp|NPD_THEKO|NAD-DEPENDENT protein deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YLAEEQATP 10
Y AEE ATP
Sbjct: 42 YRAEELATP 50


>sp|TOP6A_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YLAEEQATP 10
YL+E+ ATP
Sbjct: 275 YLSEKLATP 283


>sp|TOP6A_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 GYLAEEQATP 10
YL+E+ ATP
Sbjct: 274 AYLSEKLATP 283


>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 1 GYLAEEQAT 9
GYL EE+ T
Sbjct: 138 GYLVEEKDT 146


>sp|TOP6A_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GYLAEEQATP 10
YL+E+ ATP
Sbjct: 274 AYLSEKLATP 283


>sp|NK_METJA|NUCLEOSIDE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YLAEEQATP 10
Y +EE+ TP
Sbjct: 89 YYSEEEETP 97




320|Sequence|1596|1605|EQATPENPTI

>sp|RLMH_METMP|PUTATIVE ribosomal RNA large subunit|Methanococcus maripaludis (strain DSM

Query: 1 EQATPENPT 9
++ TPENP+
Sbjct: 40 DEKTPENPS 48


>sp|RLMH_METM6|PUTATIVE ribosomal RNA large subunit|Methanococcus maripaludis (strain C6

Query: 1 EQATPENPT 9
++ TPENP+
Sbjct: 40 DEKTPENPS 48


>sp|RLMH_METVS|PUTATIVE ribosomal RNA large subunit|Methanococcus vannielii (strain ATCC

Query: 1 EQATPENPT 9
++ TPENP+
Sbjct: 40 DEKTPENPS 48


>sp|RLMH_METM7|PUTATIVE ribosomal RNA large subunit|Methanococcus maripaludis (strain C7

Query: 1 EQATPENPT 9
++ TPENP+
Sbjct: 40 DEKTPENPS 48


>sp|CAS7_METJA|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QATPENPTI 10
Q++P NP I
Sbjct: 207 QSSPSNPVI 215


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 3 ATPENPTI 10
ATPENP +
Sbjct: 19 ATPENPKL 26


>sp|HCGE_METTM|GUANYLYLPYRIDINOL adenylase HcgE|Methanothermobacter marburgensis (strain ATCC

Query: 1 EQATPENP 8
++A PENP
Sbjct: 152 DEADPENP 159


>sp|FLAB3_METVS|FLAGELLIN B3|Methanococcus vannielii (strain ATCC 35089

Query: 3 ATPENPTI 10
+ P+NPTI
Sbjct: 150 SVPDNPTI 157


>sp|NCSA_HALVD|TRNA 2-thiolation protein NcsA|Haloferax volcanii (strain ATCC 29605

Query: 3 ATPENP 8
A+PENP
Sbjct: 48 ASPENP 53


>sp|Y408_ARCFU|UNCHARACTERIZED protein AF_0408|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EQATPENPTI 10
E PE+PTI
Sbjct: 143 EGELPEDPTI 152


>sp|IF1A_METM7|TRANSLATION initiation factor 1A|Methanococcus maripaludis (strain C7 /

Query: 1 EQATPENPT 9
+QA P+ PT
Sbjct: 4 QQAPPQQPT 12


>sp|IF1A_METM6|TRANSLATION initiation factor 1A|Methanococcus maripaludis (strain C6 /

Query: 1 EQATPENPT 9
+QA P+ PT
Sbjct: 4 QQAPPQQPT 12


>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 ATPENPT 9
A+P NPT
Sbjct: 147 ASPNNPT 153


>sp|HIS8_PYRFU|HISTIDINOL-PHOSPHATE aminotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ATPENPT 9
A+P NPT
Sbjct: 147 ASPNNPT 153


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 TPENPT 9
TP NPT
Sbjct: 172 TPNNPT 177


>sp|Y2143_SULTO|UPF0284 protein STK_21430|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 ATPENP 8
A+PENP
Sbjct: 180 ASPENP 185


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 3 ATPENP 8
ATP+NP
Sbjct: 27 ATPDNP 32


>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 4 TPENPT 9
TP NPT
Sbjct: 169 TPNNPT 174


>sp|HIS8_THEGJ|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 ATPENPT 9
A+P NPT
Sbjct: 147 ASPNNPT 153


>sp|HIS8_METS3|HISTIDINOL-PHOSPHATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 TPENPT 9
TP NPT
Sbjct: 164 TPNNPT 169


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 TPENPT 9
TP NPT
Sbjct: 156 TPNNPT 161


>sp|HIS8_HALSA|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 700922

Query: 4 TPENPT 9
TP NPT
Sbjct: 163 TPHNPT 168


>sp|HIS8_HALS3|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 29341

Query: 4 TPENPT 9
TP NPT
Sbjct: 163 TPHNPT 168


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TPENPT 9
TP NPT
Sbjct: 172 TPNNPT 177




321|Sequence|1601|1610|ENPTIRKSLA

>sp|Y880_METJA|UNCHARACTERIZED protein MJ0880|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NPTIRKSL 9
NPT+ KS+
Sbjct: 60 NPTVGKSM 67




322|Sequence|1606|1615|RKSLAGMLTP

>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KSLAGMLTP 10
K +AG+LTP
Sbjct: 172 KDMAGLLTP 180


>sp|GATD_HALWD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RKSLAGML 8
RKSLAG L
Sbjct: 427 RKSLAGEL 434


>sp|TRPF_AERPE|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RKSLAGMLTP 10
R LAG LTP
Sbjct: 161 RVGLAGGLTP 170




323|Sequence|1611|1620|GMLTPYVARK

>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 GMLTPYVA 8
G LTPY+A
Sbjct: 662 GKLTPYLA 669


>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GMLTPYVAR 9
G+LTPY+
Sbjct: 258 GLLTPYIGN 266


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PYVARK 10
PYVARK
Sbjct: 411 PYVARK 416


>sp|HIS2_SACS2|PHOSPHORIBOSYL-ATP pyrophosphatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 PYVARK 10
PYVARK
Sbjct: 35 PYVARK 40


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GMLTPYVA 8
G+LTPY+
Sbjct: 258 GLLTPYIG 265


>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 1 GMLTPYVAR 9
G+LTPY+
Sbjct: 262 GLLTPYLGN 270


>sp|HIS2_SULTO|PHOSPHORIBOSYL-ATP pyrophosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 PYVARK 10
PY+ARK
Sbjct: 35 PYIARK 40


>sp|HMGCS_METM5|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C5 /

Query: 1 GMLTPYVAR 9
G+LTPY+
Sbjct: 262 GLLTPYLGN 270


>sp|HMGCS_METMP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GMLTPYVAR 9
G+LTPY+
Sbjct: 262 GLLTPYLGN 270


>sp|HMGCS_METM6|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C6 /

Query: 1 GMLTPYVAR 9
G+LTPY+
Sbjct: 262 GLLTPYLGN 270


>sp|HMGCS_METM7|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C7 /

Query: 1 GMLTPYVAR 9
G+LTPY+
Sbjct: 262 GLLTPYLGN 270


>sp|HMGCS_METVS|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GMLTPYVAR 9
G+LTPY+
Sbjct: 262 GLLTPYLGN 270


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GMLTPY 6
G+LTPY
Sbjct: 176 GLLTPY 181




324|Sequence|1616|1625|YVARKLAVAS

>sp|MTBB3_METBA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina barkeri

Query: 1 YVARKLAV 8
YVA+KL V
Sbjct: 354 YVAKKLGV 361


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 YVARKLAV 8
YVA+KL V
Sbjct: 402 YVAKKLGV 409


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 1 YVARKLAV 8
YVA+KL V
Sbjct: 354 YVAKKLGV 361


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 YVARKLAV 8
YVA+KL V
Sbjct: 402 YVAKKLGV 409


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 1 YVARKLAV 8
YVA+KL V
Sbjct: 402 YVAKKLGV 409




325|Sequence|1621|1630|LAVASVTEIL

***** No hits found ******


326|Sequence|1626|1635|VTEILKMLNS

>sp|Y361_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0361|Methanocaldococcus

Query: 1 VTEILKMLNS 10
V ++LK+LNS
Sbjct: 11 VKDVLKLLNS 20


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 2 TEILKMLNS 10
T+ILK++NS
Sbjct: 437 TKILKIVNS 445


>sp|PYRH_META3|URIDYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 EILKMLNS 10
EILK+LN+
Sbjct: 209 EILKILNN 216




327|Sequence|1631|1640|KMLNSNTESP

>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KMLNSNTES 9
KML NTE+
Sbjct: 106 KMLQENTEA 114




328|Sequence|1636|1645|NTESPYLIWN

>sp|KORA_ARCFU|2-OXOGLUTARATE synthase subunit KorA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TESPYLIWN 10
TESP +I+N
Sbjct: 95 TESPVVIFN 103


>sp|GGGPS_NITMS|GERANYLGERANYLGLYCERYL phosphate synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 NTESPYLI 8
N+E+PY I
Sbjct: 102 NSENPYFI 109


>sp|GGGPS_CENSY|GERANYLGERANYLGLYCERYL phosphate synthase|Cenarchaeum symbiosum (strain A)

Query: 1 NTESPYLI 8
N+E+PY I
Sbjct: 100 NSENPYFI 107


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 1 NTESPYLIW 9
NTE YL W
Sbjct: 59 NTEGEYLTW 67


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 1 NTESPYLIW 9
NTE YL W
Sbjct: 59 NTERDYLAW 67


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NTESPYLIW 9
N E+P ++W
Sbjct: 480 NPETPEILW 488


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 1 NTESPYLIWN 10
N +P++ WN
Sbjct: 105 NVRTPHIGWN 114


>sp|PYRE_NATPD|OROTATE phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC

Query: 2 TESPYLI 8
T+SPY+I
Sbjct: 79 TDSPYVI 85


>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NTESPYLI 8
NT+ P+LI
Sbjct: 252 NTQPPFLI 259


>sp|NADE_METB6|NH(3)-DEPENDENT NAD(+) synthetase|Methanoregula boonei (strain DSM 21154

Query: 3 ESPYLIWN 10
E+PYL+ N
Sbjct: 103 ETPYLLGN 110


>sp|RL30_SACI6|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 NTESPYLIW 9
N SPY+ W
Sbjct: 49 NKVSPYVTW 57


>sp|RL30_SACI4|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 NTESPYLIW 9
N SPY+ W
Sbjct: 49 NKVSPYVTW 57


>sp|RL30_SACI3|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 NTESPYLIW 9
N SPY+ W
Sbjct: 49 NKVSPYVTW 57


>sp|RL30_SACI2|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 NTESPYLIW 9
N SPY+ W
Sbjct: 49 NKVSPYVTW 57


>sp|RL30_SACI1|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 NTESPYLIW 9
N SPY+ W
Sbjct: 49 NKVSPYVTW 57


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 1 NTESPYLIW 9
NT+ YL W
Sbjct: 59 NTDGEYLTW 67


>sp|RL30_SACS2|LARGE ribosomal subunit protein uL30|Saccharolobus solfataricus (strain

Query: 1 NTESPYLIWN 10
N SPY+ W
Sbjct: 49 NKVSPYITWG 58


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TESPYLI 8
T+SPY+I
Sbjct: 150 TDSPYVI 156


>sp|RL30_SACI7|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 NTESPYLIWN 10
N SPY+ W
Sbjct: 49 NKVSPYVTWG 58


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TESPYLI 8
T+SPY+I
Sbjct: 150 TDSPYVI 156




329|Sequence|1641|1650|YLIWNNSTRA

>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YLIWNNSTRA 10
YL+W+ S R+
Sbjct: 334 YLVWSKSNRS 343


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 1 YLIWNNSTR 9
YL+WN R
Sbjct: 369 YLVWNAIKR 377


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 1 YLIWNNSTR 9
YL+WN R
Sbjct: 351 YLVWNAIKR 359


>sp|Y3514_METJA|UNCHARACTERIZED protein MJECL14|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLIWNNSTR 9
YL+WN R
Sbjct: 298 YLVWNAIKR 306


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 1 YLIWNNSTR 9
YL+WN R
Sbjct: 348 YLVWNAIKR 356


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 1 YLIWNNSTR 9
YL+WN R
Sbjct: 355 YLVWNAIKR 363


>sp|Y819_METJA|PUTATIVE uncharacterized protein MJ0819|Methanocaldococcus jannaschii

Query: 1 YLIWN 5
YL+WN
Sbjct: 99 YLVWN 103


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 YLIWNN 6
Y +WNN
Sbjct: 230 YTLWNN 235


>sp|Y1565_ARCFU|UNCHARACTERIZED protein AF_1565|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YLIWNNSTRA 10
YL+WNN + +
Sbjct: 49 YLVWNNPSNS 58




330|Sequence|1646|1655|NSTRAELLEF

>sp|DTDA_PYRCJ|D-AMINOACYL-TRNA deacylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 NSTRAELLEF 10
N TR+E++EF
Sbjct: 230 NPTRSEVVEF 239


>sp|DTDA_PYRNV|D-AMINOACYL-TRNA deacylase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 NSTRAELLEF 10
N RAE++EF
Sbjct: 231 NPARAEVVEF 240


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 NSTRAELLEF 10
NST+ E++EF
Sbjct: 117 NSTKEEIMEF 126


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 2 STRAELLEF 10
S RAELLE+
Sbjct: 771 SERAELLEY 779


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 2 STRAELLEF 10
+TRAELL +
Sbjct: 235 ATRAELLNY 243


>sp|DTDA_PYRIL|D-AMINOACYL-TRNA deacylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 NSTRAELLEF 10
N R+E++EF
Sbjct: 231 NPARSEIIEF 240


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 TRAELLEF 10
T AE+LEF
Sbjct: 273 TAAEMLEF 280




331|Sequence|1651|1660|ELLEFLESQQ

>sp|NFI_SACS2|ENDONUCLEASE V|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LLEFLESQQ 10
LLEFLE Q
Sbjct: 6 LLEFLEKLQ 14


>sp|NFI_SACI7|ENDONUCLEASE V|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LLEFLESQQ 10
LLEFLE Q
Sbjct: 6 LLEFLEKLQ 14


>sp|NFI_SACI6|ENDONUCLEASE V|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LLEFLESQQ 10
LLEFLE Q
Sbjct: 6 LLEFLEKLQ 14


>sp|NFI_SACI4|ENDONUCLEASE V|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LLEFLESQQ 10
LLEFLE Q
Sbjct: 6 LLEFLEKLQ 14


>sp|NFI_SACI3|ENDONUCLEASE V|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 LLEFLESQQ 10
LLEFLE Q
Sbjct: 6 LLEFLEKLQ 14


>sp|NFI_SACI2|ENDONUCLEASE V|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LLEFLESQQ 10
LLEFLE Q
Sbjct: 6 LLEFLEKLQ 14


>sp|NFI_SACI1|ENDONUCLEASE V|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LLEFLESQQ 10
LLEFLE Q
Sbjct: 6 LLEFLEKLQ 14


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 1 ELLEFLESQ 9
ELLE+LE +
Sbjct: 306 ELLEYLERE 314


>sp|CYDE_METMP|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ELLEFLE 7
ELL+FLE
Sbjct: 167 ELLDFLE 173


>sp|HEM1_METB6|GLUTAMYL-TRNA reductase|Methanoregula boonei (strain DSM 21154

Query: 2 LLEFLESQQ 10
L +FLESQ+
Sbjct: 65 LRDFLESQE 73


>sp|Y3524_METAC|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina

Query: 1 ELLEFLESQQ 10
ELLEF+E ++
Sbjct: 313 ELLEFIEERK 322




332|Sequence|1656|1665|LESQQENMIK

***** No hits found ******


333|Sequence|1661|1670|ENMIKKGDCD

>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 2 NMIKKGDCD 10
NM++ GD D
Sbjct: 143 NMVRSGDAD 151


>sp|HDRC_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 ENMIKKGDCD 10
EN+I+KG+ D
Sbjct: 8 ENIIRKGNID 17


>sp|HDRC_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 ENMIKKGDCD 10
EN+I+KG+ D
Sbjct: 8 ENIIRKGNID 17


>sp|FKBPS_METJA|SHORT-TYPE peptidyl-prolyl cis-trans isomerase|Methanocaldococcus

Query: 2 NMIKKGD 8
N+IKKGD
Sbjct: 3 NLIKKGD 9


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 IKKGDC 9
IK+GDC
Sbjct: 311 IKRGDC 316


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 2 NMIKKGDCD 10
NMIK+G D
Sbjct: 970 NMIKEGKID 978


>sp|PGK_THEKO|PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ENMIKKGDCD 10
EN+++KG D
Sbjct: 209 ENVLRKGKAD 218


>sp|RPIA_KORCO|RIBOSE-5-PHOSPHATE isomerase A|Korarchaeum cryptofilum (strain OPF8)

Query: 2 NMIKKGDCD 10
N+IK+ +CD
Sbjct: 146 NLIKRFNCD 154


>sp|Y1426_METTH|UPF0284 protein MTH_1426|Methanothermobacter thermautotrophicus (strain

Query: 4 IKKGDC 9
I+KGDC
Sbjct: 210 IEKGDC 215


>sp|RAD50_THEVO|DNA double-strand break repair Rad50|Thermoplasma volcanium (strain

Query: 1 ENMIKKGD 8
E+MIKKG+
Sbjct: 57 EDMIKKGE 64


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 3 MIKKGD 8
M+KKGD
Sbjct: 162 MVKKGD 167


>sp|EF1A_PYRWO|ELONGATION factor 1-alpha|Pyrococcus woesei

Query: 1 ENMIKKGD 8
EN++KK D
Sbjct: 188 ENVVKKSD 195


>sp|EF1A_PYRFU|ELONGATION factor 1-alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ENMIKKGD 8
EN++KK D
Sbjct: 186 ENVVKKSD 193


>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ENMIKKG 7
EN++KKG
Sbjct: 320 ENLMKKG 326


>sp|KDGA_SACSO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 1 ENMIKKG 7
EN+I+KG
Sbjct: 28 ENLIRKG 34


>sp|KDGA_SACS2|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ENMIKKG 7
EN+I+KG
Sbjct: 42 ENLIRKG 48


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 3 MIKKGDCD 10
M++KGD D
Sbjct: 160 MVQKGDAD 167


>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 4 IKKGDC 9
I+KGDC
Sbjct: 310 IRKGDC 315


>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain

Query: 2 NMIKKGD 8
N+IK+GD
Sbjct: 76 NIIKRGD 82


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 1 ENMIKKGD 8
+ +IKKGD
Sbjct: 155 DKLIKKGD 162




334|Sequence|1666|1675|KGDCDKTYGS

>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DCDKTYG 9
DC K+YG
Sbjct: 237 DCQKSYG 243


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 KGDCDKTYGS 10
KGD TYG+
Sbjct: 268 KGDAKNTYGT 277


>sp|DPM1L_HALVD|DOLICHYL-PHOSPHATE hexose transferase HVO_1613|Haloferax volcanii (strain ATCC 29605

Query: 3 DCDKTY 8
DCD TY
Sbjct: 88 DCDDTY 93


>sp|AROB_THEKO|3-DEHYDROQUINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GDCDKTYGS 10
GDC K GS
Sbjct: 332 GDCQKPGGS 340


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 3 DCDKTY 8
DCD+T+
Sbjct: 52 DCDRTF 57


>sp|GLPK1_SULAC|GLYCEROL kinase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KGDCDKTYGS 10
KGD TYG+
Sbjct: 252 KGDVKCTYGT 261


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 1 KGDCDKTYGS 10
KG CD Y S
Sbjct: 444 KGQCDDCYVS 453


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 KGDCDKTY 8
+GDCD Y
Sbjct: 95 RGDCDVPY 102


>sp|DPS_SACS2|DNA protection during starvation protein|Saccharolobus solfataricus

Query: 4 CDKTYG 9
CD TYG
Sbjct: 135 CDMTYG 140


>sp|RPO3_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfurisphaera tokodaii (strain DSM

Query: 1 KGDCDKTY 8
KG+C+K +
Sbjct: 174 KGNCEKAF 181


>sp|TIAS_ARCFU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Archaeoglobus fulgidus (strain

Query: 1 KGDCDKTYGS 10
KGD + YGS
Sbjct: 316 KGDVVEVYGS 325


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 2 GDCDKTYG 9
DCD YG
Sbjct: 97 ADCDTGYG 104


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 3 DCDKTYGS 10
DC TYG+
Sbjct: 314 DCALTYGA 321


>sp|Y1484_METJA|UNCHARACTERIZED protein MJ1484|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGDCDKTYG 9
KG+C K +G
Sbjct: 61 KGECKKYFG 69


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GDCDKT 7
G CDKT
Sbjct: 122 GGCDKT 127


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GDCDKT 7
G CDKT
Sbjct: 121 GGCDKT 126


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GDCDKT 7
G CDKT
Sbjct: 121 GGCDKT 126


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GDCDKT 7
G CDKT
Sbjct: 121 GGCDKT 126


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GDCDKT 7
G CDKT
Sbjct: 121 GGCDKT 126


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GDCDKT 7
G CDKT
Sbjct: 121 GGCDKT 126


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GDCDKT 7
G CDKT
Sbjct: 121 GGCDKT 126


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GDCDKT 7
G CDKT
Sbjct: 121 GGCDKT 126


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GDCDKT 7
G CDKT
Sbjct: 122 GGCDKT 127


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GDCDKT 7
G CDKT
Sbjct: 122 GGCDKT 127


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GDCDKT 7
G CDKT
Sbjct: 122 GGCDKT 127


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GDCDKT 7
G CDKT
Sbjct: 122 GGCDKT 127


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GDCDKT 7
G CDKT
Sbjct: 122 GGCDKT 127


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GDCDKT 7
G CDKT
Sbjct: 120 GGCDKT 125


>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGDCDK 6
KG+CD+
Sbjct: 204 KGECDR 209


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DCDKTY 8
DC+KT+
Sbjct: 449 DCEKTF 454




335|Sequence|1671|1680|KTYGSEFVYS

>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 TYGSEF 7
TYGSEF
Sbjct: 715 TYGSEF 720


>sp|Y1210_METJA|UNCHARACTERIZED protein MJ1210|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YGSEFVYS 10
YG+ FVY+
Sbjct: 115 YGANFVYT 122


>sp|AROD_METMJ|3-DEHYDROQUINATE dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 YGSEFVYS 10
+GSEF +S
Sbjct: 178 FGSEFTFS 185


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 TYGSEF 7
TYGSEF
Sbjct: 169 TYGSEF 174


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 KTYGSEFV 8
K YGS+FV
Sbjct: 290 KVYGSKFV 297


>sp|FLPA_METM5|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 1 KTYGSEFVYS 10
+ YG + VYS
Sbjct: 35 RVYGEKLVYS 44


>sp|FLPA_METMP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 1 KTYGSEFVYS 10
+ YG + VYS
Sbjct: 35 RVYGEKLVYS 44


>sp|FLPA_METM6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 1 KTYGSEFVYS 10
+ YG + VYS
Sbjct: 35 RVYGEKLVYS 44


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 KTYGSEFVY 9
K YG+E VY
Sbjct: 268 KMYGAEIVY 276


>sp|FLPA_METM7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 1 KTYGSEFVYS 10
+ YG + VYS
Sbjct: 35 RVYGEKLVYS 44


>sp|FWDE_METJA|FERREDOXIN-TYPE protein FwdE|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YGSEFVYS 10
YG++F++S
Sbjct: 65 YGAKFIHS 72


>sp|Y1307_METLZ|UPF0179 protein Mlab_1307|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 GSEFVYS 10
G+EFVY+
Sbjct: 19 GAEFVYA 25


>sp|APGM_PYRCJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KTYGSEFVY 9
K YG E VY
Sbjct: 135 KRYGVEVVY 143


>sp|FLPA_METVS|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus vannielii (strain

Query: 1 KTYGSEFVYS 10
+ YG + +YS
Sbjct: 35 RVYGEKLIYS 44


>sp|G3PP_PYRHO|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KTYGSEFVY 9
K YGS F Y
Sbjct: 52 KEYGSNFPY 60


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KTYGSEFVY 9
K YG +F Y
Sbjct: 130 KKYGGKFYY 138


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KTYGSEF 7
KTYG E+
Sbjct: 258 KTYGKEY 264




336|Sequence|1676|1685|EFVYSDHAKE

>sp|Y1656_METJA|UNCHARACTERIZED protein MJ1656|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YSDHAKE 10
Y DHAKE
Sbjct: 47 YIDHAKE 53


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus (strain

Query: 2 FVYSDH 7
F YSDH
Sbjct: 325 FTYSDH 330




337|Sequence|1681|1690|DHAKELIVGE

>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DHAKELIVG 9
D KELIVG
Sbjct: 567 DGGKELIVG 575


>sp|TYSY_METBU|PUTATIVE thymidylate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DHAKELIVGE 10
++AK+LI GE
Sbjct: 73 EYAKQLITGE 82


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 AKELIVGE 10
AKE+I+GE
Sbjct: 1017 AKEVIIGE 1024


>sp|Y1656_METJA|UNCHARACTERIZED protein MJ1656|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DHAKEL 6
DHAKEL
Sbjct: 49 DHAKEL 54


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HAKELIVGE 10
HA EL++GE
Sbjct: 245 HAVELLLGE 253


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DHAKELIVG 9
DH LI+G
Sbjct: 116 DHTSSLIIG 124


>sp|Y038_PYRAB|UPF0284 protein PYRAB00380|Pyrococcus abyssi (strain GE5 /

Query: 4 KELIVGE 10
KEL++GE
Sbjct: 132 KELVIGE 138


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 1 DHAKELI 7
+HAKELI
Sbjct: 174 EHAKELI 180


>sp|Y534_THEGJ|UPF0284 protein TGAM_0534|Thermococcus gammatolerans (strain DSM 15229

Query: 4 KELIVGE 10
KEL++GE
Sbjct: 132 KELVIGE 138




338|Sequence|1686|1695|LIVGEIFVRV

>sp|GUAAB_METAR|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocella arvoryzae

Query: 2 IVGEIFVRV 10
IVGE+F+RV
Sbjct: 101 IVGEMFIRV 109


>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 2 IVGEIFVRV 10
+VGE F+RV
Sbjct: 100 VVGETFIRV 108


>sp|GUAAB_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit B|Archaeoglobus fulgidus

Query: 2 IVGEIFVRV 10
++GE+FVR+
Sbjct: 100 VIGELFVRI 108


>sp|TRPA_METAC|TRYPTOPHAN synthase alpha chain|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LIVGEIFVRV 10
+IVG +FVR+
Sbjct: 237 VIVGSVFVRI 246


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 3 VGEIFVRV 10
VGE F+RV
Sbjct: 102 VGETFIRV 109


>sp|GUAAB_METPE|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosphaerula

Query: 2 IVGEIFVRV 10
I+GE F+RV
Sbjct: 101 IIGERFIRV 109


>sp|URED_HALWD|UREASE accessory protein UreD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LIVGEIFV 8
+IVG++FV
Sbjct: 165 VIVGDVFV 172


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 3 VGEIFVRV 10
+GE F+RV
Sbjct: 102 IGETFIRV 109


>sp|GUAAB_METMA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina mazei

Query: 3 VGEIFVRV 10
+GE F+RV
Sbjct: 102 IGETFIRV 109


>sp|TRPA_METMA|TRYPTOPHAN synthase alpha chain|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LIVGEIFVRV 10
+IVG FVR+
Sbjct: 236 VIVGSAFVRI 245




339|Sequence|1691|1700|IFVRVYNEVP

>sp|TRPA_METB6|TRYPTOPHAN synthase alpha chain|Methanoregula boonei (strain DSM 21154

Query: 3 VRVYNEVP 10
VR Y+EVP
Sbjct: 86 VRAYSEVP 93


>sp|Y038_METJA|UNCHARACTERIZED protein MJ0038|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FVRVYNEVP 10
FVR +NE P
Sbjct: 120 FVRFFNECP 128


>sp|TRPF_SULAC|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FVRVYNEVP 10
FVR Y E+P
Sbjct: 45 FVRRYVEIP 53


>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FVRVYNE 8
FVR+Y+E
Sbjct: 269 FVRIYDE 275


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FVRVYNE 8
FVR+YN+
Sbjct: 158 FVRMYND 164


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 2 FVRVYNEV 9
VRVYNE+
Sbjct: 214 LVRVYNEM 221


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FVRVYNE 8
FVR+YN+
Sbjct: 158 FVRMYNK 164


>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IFVRVYNEV 9
I +R+YNE+
Sbjct: 454 IAIRMYNEI 462


>sp|TRUA_THEAC|TRNA pseudouridine synthase A|Thermoplasma acidophilum (strain ATCC

Query: 1 IFVRVYNEVP 10
I+V Y EVP
Sbjct: 83 IYVHSYAEVP 92


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 VRVYNEVP 10
VRV N+VP
Sbjct: 603 VRVINKVP 610


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FVRVYNE 8
FVR+YN+
Sbjct: 154 FVRMYNK 160


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FVRVYNEVP 10
FV YNE P
Sbjct: 5 FVDFYNEYP 13


>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 3 VRVYNEV 9
+R+YNEV
Sbjct: 242 LRIYNEV 248


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IFVRVYNE 8
+FVR+++E
Sbjct: 267 VFVRIFSE 274




340|Sequence|1696|1705|YNEVPTFQLE

>sp|PSB_METTP|PROTEASOME subunit beta|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YNEVPTFQLE 10
Y EVPT ++E
Sbjct: 192 YEEVPTSEVE 201


>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NEVPTFQL 9
N VP FQL
Sbjct: 209 NRVPIFQL 216


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YNEVPTFQLE 10
Y EVP+ +LE
Sbjct: 403 YGEVPSGELE 412


>sp|Y1551_METVS|UPF0285 protein Mevan_1551|Methanococcus vannielii (strain ATCC 35089

Query: 1 YNEVPTFQLE 10
YN TF LE
Sbjct: 140 YNAYKTFNLE 149


>sp|Y1071_METJA|UNCHARACTERIZED protein MJ1071|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YNEVPTFQLE 10
+NE+P F+ E
Sbjct: 67 FNEIPVFRGE 76




341|Sequence|1701|1710|TFQLEVPKAF

>sp|IF5A_ARCFU|TRANSLATION initiation factor 5A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TFQLEVPK 8
TF+LEVP+
Sbjct: 94 TFELEVPE 101


>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TFQLEVPKAF 10
T + EVPKAF
Sbjct: 74 TGEEEVPKAF 83


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 2 FQLEVPKAF 10
Q+E PKAF
Sbjct: 195 LQVEKPKAF 203


>sp|IF5A_METAR|TRANSLATION initiation factor 5A|Methanocella arvoryzae (strain DSM 22066

Query: 1 TFQLEVPK 8
TF+LE+P+
Sbjct: 94 TFELEIPE 101


>sp|IF2B_METTP|TRANSLATION initiation factor 2 subunit|Methanothrix thermoacetophila (strain

Query: 2 FQLEVPKAF 10
FQ+ VP+ F
Sbjct: 25 FQIPVPRIF 33


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 4 LEVPKAF 10
+E+PKAF
Sbjct: 196 VEIPKAF 202


>sp|IF2B_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter

Query: 1 TFQLEVPKAF 10
T + EVPKA+
Sbjct: 22 TKRFEVPKAY 31


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TFQLEVPKA 9
T+QL+ PK+
Sbjct: 289 TYQLKYPKS 297


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 1 TFQLEVPKA 9
T+QL+ PK+
Sbjct: 290 TYQLKYPKS 298




342|Sequence|1706|1715|VPKAFAASLL

>sp|ARSM_HALSA|ARSENITE methyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PKAFAA 7
PKAFAA
Sbjct: 195 PKAFAA 200




343|Sequence|1711|1720|AASLLDYIGS

>sp|QUEC_THEKO|7-CYANO-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AASLLDYIG 9
AASLLD +G
Sbjct: 116 AASLLDALG 124


>sp|QUEC_PYRHO|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AASLLDYIG 9
AASLLD +G
Sbjct: 116 AASLLDALG 124


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 AASLLDYIG 9
AASLLD +G
Sbjct: 116 AASLLDALG 124


>sp|QUEC_PYRFU|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AASLLDYIG 9
AASLLD +G
Sbjct: 117 AASLLDALG 125


>sp|HICDH_PYRHO|ISOCITRATE/HOMOISOCITRATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AASLLDYIG 9
AA +LDY+G
Sbjct: 271 AAMMLDYLG 279


>sp|TRPD_SULAC|ANTHRANILATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 AASLLDY 7
AASLLDY
Sbjct: 199 AASLLDY 205


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 4 LLDYIG 9
LLDYIG
Sbjct: 289 LLDYIG 294


>sp|GCSPA_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 ASLLDYIG 9
+S+LDY+G
Sbjct: 5 SSMLDYLG 12


>sp|PYRH_METAR|URIDYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 SLLDYIG 9
S+LDYIG
Sbjct: 62 SILDYIG 68


>sp|IPK_METTH|ISOPENTENYL phosphate kinase|Methanothermobacter thermautotrophicus (strain

Query: 2 ASLLDYIGS 10
A LLD IGS
Sbjct: 193 ARLLDVIGS 201




344|Sequence|1716|1725|DYIGSQAQYL

>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 27 DYAGSQA 33


>sp|FEN_METAR|FLAP endonuclease 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 DYIGSQ 6
DY+GSQ
Sbjct: 166 DYVGSQ 171


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 25 DYSGSQA 31


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 27 DYSGSQA 33


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 25 DYSGSQA 31


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 27 DYSGSQA 33


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 27 DYSGSQA 33


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 DYIGSQ 6
DYIGSQ
Sbjct: 167 DYIGSQ 172


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 27 DYSGSQA 33


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 27 DYSGSQA 33


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 23 DYSGSQA 29


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 25 DYSGSQA 31


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 25 DYSGSQA 31


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 25 DYSGSQA 31


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 25 DYSGSQA 31


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 25 DYSGSQA 31


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 25 DYSGSQA 31


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 25 DYSGSQA 31


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 25 DYSGSQA 31


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 2 YIGSQAQYL 10
Y+G +A+Y+
Sbjct: 254 YVGGKAKYI 262


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 DYIGSQA 7
DY GSQA
Sbjct: 25 DYSGSQA 31




345|Sequence|1721|1730|QAQYLHTFMA

>sp|COFC_METPS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella paludicola (strain DSM 17711

Query: 2 AQYLHTFMA 10
A+YL TFMA
Sbjct: 182 AEYLRTFMA 190


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 4 YLHTFMA 10
YLH+F+A
Sbjct: 28 YLHSFLA 34


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 YLHTFMA 10
YLH F+A
Sbjct: 23 YLHEFLA 29


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 4 YLHTFMA 10
YLH F+A
Sbjct: 23 YLHEFLA 29


>sp|Y007_METJA|PUTATIVE dehydratase subunit MJ0007|Methanocaldococcus jannaschii (strain

Query: 3 QYLHTF 8
QY HTF
Sbjct: 324 QYCHTF 329




346|Sequence|1726|1735|HTFMAITHAA

>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 HTFMAITH 8
HT + +TH
Sbjct: 441 HTILMVTH 448




347|Sequence|1731|1740|ITHAAKVESE

>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ITHAAKVES 9
ITH AKV S
Sbjct: 181 ITHVAKVTS 189


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 ITHAAKVES 9
ITH AK+ S
Sbjct: 183 ITHTAKIIS 191


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 ITHAAKVES 9
ITH AK+ S
Sbjct: 183 ITHTAKIIS 191




348|Sequence|1736|1745|KVESEQHGDR

>sp|GAL1_PYRHO|GALACTOKINASE horikoshii (strain ATCC 700860

Query: 1 KVESEQHGD 9
K+E+E+HG+
Sbjct: 34 KIEAEKHGE 42


>sp|Y258_ARCFU|UNCHARACTERIZED protein AF_0258|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VESEQHG 8
VESE HG
Sbjct: 90 VESEYHG 96


>sp|GVPN2_HALSA|GAS vesicle ATPase GvpN2|Halobacterium salinarum (strain ATCC 700922

Query: 3 ESEQHGDR 10
+SEQ GDR
Sbjct: 43 DSEQAGDR 50


>sp|Y3504_METJA|UNCHARACTERIZED protein MJECL04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVESEQHGD 9
K+ES+++GD
Sbjct: 421 KIESKENGD 429


>sp|ACDE_METTH|ACETYL-COA decarbonylase/synthase complex subunit

Query: 2 VESEQHG 8
+ESE HG
Sbjct: 83 IESEPHG 89




349|Sequence|1741|1750|QHGDRLPRVE

>sp|T2M2_METJA|TYPE II restriction enzyme MjaII|Methanocaldococcus jannaschii (strain

Query: 1 QHGDRLPRVE 10
+ G+RLP VE
Sbjct: 116 KSGERLPNVE 125


>sp|PYRK_METKA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanopyrus kandleri

Query: 2 HGDRLPR 8
H DRLPR
Sbjct: 136 HADRLPR 142


>sp|PELO_PYRAR|PROTEIN pelota homolog|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HGDRLPR 8
HGDR+P+
Sbjct: 212 HGDRIPQ 218


>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC

Query: 3 GDRLPR 8
GDR+PR
Sbjct: 42 GDRIPR 47


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 QHGDRLPRV 9
+HG+RLP +
Sbjct: 156 RHGNRLPDI 164


>sp|SUCC1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 1 QHGDRLPRVE 10
+HG R+PR E
Sbjct: 14 KHGIRVPRGE 23


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 HGDRLPRVE 10
H D LP++E
Sbjct: 502 HSDNLPKLE 510


>sp|CFBA_METBU|SIROHYDROCHLORIN cobaltochelatase|Methanococcoides burtonii (strain DSM 6242

Query: 2 HGDRLP 7
HG RLP
Sbjct: 12 HGSRLP 17


>sp|CYAS_METTP|CYSTEATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GDRLPRV 9
G+RLPR+
Sbjct: 253 GERLPRL 259


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 3 GDRLPRV 9
GDRLP++
Sbjct: 256 GDRLPKL 262


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HGDRLPRVE 10
HG++L +VE
Sbjct: 96 HGEKLRKVE 104


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 HGDRLPRVE 10
HG++L +VE
Sbjct: 96 HGEKLRKVE 104


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 QHGDRLPR 8
+HG+ LPR
Sbjct: 304 KHGEDLPR 311


>sp|CFBA_METKA|SIROHYDROCHLORIN cobaltochelatase|Methanopyrus kandleri (strain AV19 /

Query: 2 HGDRLP 7
HG RLP
Sbjct: 9 HGSRLP 14


>sp|CFBA_METJA|SIROHYDROCHLORIN cobaltochelatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HGDRLP 7
HG RLP
Sbjct: 9 HGSRLP 14


>sp|TMBL1_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 2 HGDRLPRV 9
HG+ LP +
Sbjct: 106 HGEELPEI 113


>sp|CFBA_METMP|SIROHYDROCHLORIN cobaltochelatase|Methanococcus maripaludis (strain DSM 14266

Query: 2 HGDRLP 7
HG RLP
Sbjct: 9 HGSRLP 14


>sp|RNP3_METAC|RIBONUCLEASE P protein component 3|Methanosarcina acetivorans (strain ATCC

Query: 1 QHGDRLP 7
H DRLP
Sbjct: 40 NHSDRLP 46


>sp|CFBA_META3|SIROHYDROCHLORIN cobaltochelatase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HGDRLP 7
HG RLP
Sbjct: 9 HGSRLP 14




350|Sequence|1746|1755|LPRVEMALEA

>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 3 RVEMALEA 10
R+EMAL+A
Sbjct: 189 RIEMALDA 196


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 3 RVEMALEA 10
R+EMAL+A
Sbjct: 189 RIEMALDA 196


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PRVEMALEA 10
P++E A+EA
Sbjct: 1032 PKIEAAIEA 1040


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 2 PRVEMALEA 10
P++E A+EA
Sbjct: 901 PKIEAAIEA 909


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PRVEMALEA 10
P++E A+EA
Sbjct: 563 PKIEAAIEA 571




351|Sequence|1751|1760|MALEALRNVI

>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 ALEALRNV 9
ALE LRNV
Sbjct: 297 ALETLRNV 304


>sp|SAHH_ARCFU|ADENOSYLHOMOCYSTEINASE fulgidus (strain ATCC 49558

Query: 4 EALRNVI 10
EALRNVI
Sbjct: 97 EALRNVI 103


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LEALRNVI 10
LEA RNV+
Sbjct: 456 LEAYRNVV 463


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 EALRNVI 10
EA+RNVI
Sbjct: 457 EAIRNVI 463


>sp|IDI2_METS5|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Metallosphaera sedula (strain ATCC 51363

Query: 2 ALEALRNV 9
ALEALR++
Sbjct: 173 ALEALRDI 180


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ALEALRNVI 10
AL ALRN++
Sbjct: 399 ALHALRNIL 407


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 2 ALEALRNVI 10
AL ALRN++
Sbjct: 399 ALHALRNIL 407


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MALEALRN 8
+ALE LRN
Sbjct: 375 LALETLRN 382


>sp|WTPB_PYRHO|MOLYBDATE/TUNGSTATE transport system permease protein|Pyrococcus horikoshii (strain

Query: 1 MALEALRN 8
+ LEALRN
Sbjct: 48 LVLEALRN 55


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 1 MALEALRN 8
+ALEAL+N
Sbjct: 452 VALEALKN 459


>sp|Y679_METMA|UPF0285 protein MM_0679|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MALEALRNV 9
+ LEA+RNV
Sbjct: 189 LDLEAIRNV 197


>sp|RS13_METTP|SMALL ribosomal subunit protein uS13|Methanothrix thermoacetophila

Query: 3 LEALRNVI 10
+EAL+NVI
Sbjct: 67 IEALKNVI 74




352|Sequence|1756|1765|LRNVIKYNPG

>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 2 RNVIKYNP 9
RN I+YNP
Sbjct: 355 RNRIQYNP 362


>sp|HMD_METVO|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus voltae

Query: 3 NVIKYNPG 10
N+I Y+PG
Sbjct: 196 NIISYHPG 203


>sp|HMD_METTL|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermococcus thermolithotrophicus

Query: 3 NVIKYNPG 10
N+I Y+PG
Sbjct: 196 NIISYHPG 203


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LRNVIKYN 8
LRN IKYN
Sbjct: 10 LRNAIKYN 17


>sp|HMD_METMP|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 3 NVIKYNPG 10
N+I Y+PG
Sbjct: 196 NIIAYHPG 203


>sp|HMD_METM7|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C7 /

Query: 3 NVIKYNPG 10
N+I Y+PG
Sbjct: 196 NIIAYHPG 203


>sp|HMD_METM5|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C5 /

Query: 3 NVIKYNPG 10
N+I Y+PG
Sbjct: 196 NIIAYHPG 203


>sp|Y1598_METJA|UPF0284 protein MJ1598|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RNVIKYNP 9
R+VIKY P
Sbjct: 42 RDVIKYTP 49


>sp|MDH_THEAC|MALATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RNVIKYNP 9
RN+ KY+P
Sbjct: 110 RNIKKYSP 117


>sp|MDH_METBF|MALATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RNVIKYNP 9
RN+ KY P
Sbjct: 103 RNIAKYAP 110


>sp|RL5_CENSY|LARGE ribosomal subunit protein uL5|Cenarchaeum symbiosum (strain A)

Query: 5 IKYNPG 10
IKY+PG
Sbjct: 111 IKYDPG 116


>sp|HMD_METVS|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 3 NVIKYNPG 10
N+I ++PG
Sbjct: 196 NIISFHPG 203


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NVIKYNP 9
N+IKY+P
Sbjct: 479 NLIKYSP 485


>sp|Y100_ARCFU|UPF0175 protein AF_0100|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LRNVIKYNP 9
+ NV+K NP
Sbjct: 10 IENVVKSNP 18


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LRNVIKYN 8
LRNV KY+
Sbjct: 72 LRNVFKYS 79


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 LRNVIKYNP 9
LRN IK+ P
Sbjct: 732 LRNEIKFMP 740


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LRNVIKYNP 9
++NV K NP
Sbjct: 836 IKNVAKINP 844


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LRNVIKYNPG 10
L IKYNP
Sbjct: 162 LEKRIKYNPA 171


>sp|RADB_METMP|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 LRNVIKYNPG 10
L+N+I Y P
Sbjct: 70 LKNIIIYEPS 79


>sp|RADB_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 LRNVIKYNPG 10
L+N+I Y P
Sbjct: 70 LKNIIIYEPS 79


>sp|RADB_METM7|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 LRNVIKYNPG 10
L+N+I Y P
Sbjct: 70 LKNIIIYEPS 79


>sp|HIS5_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 3 NVIKYN 8
NVIKYN
Sbjct: 121 NVIKYN 126




353|Sequence|1761|1770|KYNPGSESEC

>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro /

Query: 1 KYNPGSESEC 10
K+NPG E +C
Sbjct: 289 KFNPGMEPKC 298


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 YNPGSESEC 10
Y+ GSE EC
Sbjct: 228 YSYGSEREC 236


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 YNPGSESEC 10
YN GSE+ C
Sbjct: 420 YNRGSENRC 428


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YNPGSESE 9
YNPGS +
Sbjct: 471 YNPGSRGQ 478


>sp|WECBH_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase homolog|Methanococcus maripaludis (strain DSM 14266

Query: 1 KYNPGSES 8
K+NP SE+
Sbjct: 329 KFNPASET 336


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KYNPGSESEC 10
K N G+E+EC
Sbjct: 150 KDNLGAETEC 159


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 KYNPGS 6
KYNPG+
Sbjct: 271 KYNPGT 276


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KYNPGSESE 9
KYNPG E
Sbjct: 216 KYNPGFMEE 224


>sp|PUR1_ARCFU|AMIDOPHOSPHORIBOSYLTRANSFERASE fulgidus (strain ATCC 49558

Query: 4 PGSESEC 10
PG E EC
Sbjct: 451 PGEECEC 457


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 KYNPGSESE 9
K+ PG+E+E
Sbjct: 736 KFIPGTEAE 744


>sp|PYRH_PYRAE|URIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 NPGSESEC 10
NPGS+ C
Sbjct: 210 NPGSKITC 217


>sp|PYRH_PYRIL|URIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 NPGSESEC 10
NPGS+ C
Sbjct: 210 NPGSKITC 217


>sp|PYRH_PYRAR|URIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 NPGSESEC 10
NPGS+ C
Sbjct: 210 NPGSKITC 217


>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NPGSESEC 10
N G+E+EC
Sbjct: 152 NLGAETEC 159


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 1 KYNPGSESE 9
KY PGS E
Sbjct: 6 KYRPGSFDE 14


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 YNPGSES 8
Y PGS+S
Sbjct: 228 YEPGSDS 234




354|Sequence|1766|1775|SESECIGHFK

>sp|COBY_METJA|ADENOSYLCOBINAMIDE-PHOSPHATE guanylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 SECIGHF 9
+ECIG+F
Sbjct: 85 NECIGYF 91


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 4 ECIGHF 9
EC GHF
Sbjct: 69 ECPGHF 74


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain

Query: 4 ECIGHF 9
EC GHF
Sbjct: 69 ECPGHF 74


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter

Query: 4 ECIGHF 9
EC GHF
Sbjct: 69 ECPGHF 74


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter

Query: 4 ECIGHF 9
EC GHF
Sbjct: 69 ECPGHF 74


>sp|RS4_METBU|SMALL ribosomal subunit protein uS4|Methanococcoides burtonii (strain

Query: 1 SESECIGHFK 10
+ES+ IGH K
Sbjct: 63 AESDLIGHSK 72


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii

Query: 4 ECIGHF 9
EC GHF
Sbjct: 71 ECPGHF 76


>sp|LYSK_AERPE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Aeropyrum pernix (strain

Query: 2 ESECIGH 8
E EC GH
Sbjct: 170 EIECTGH 176


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SESECIGH 8
S CIGH
Sbjct: 470 SRGPCIGH 477


>sp|ILVD_METVS|DIHYDROXY-ACID dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SESECIGH 8
S CIGH
Sbjct: 469 SRGPCIGH 476


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SESECIGH 8
++ CIGH
Sbjct: 174 ADESCIGH 181


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SESECIGH 8
++ CIGH
Sbjct: 174 ADESCIGH 181


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SESECIGH 8
++ CIGH
Sbjct: 174 ADESCIGH 181


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 SESECIGH 8
++ CIGH
Sbjct: 174 ADESCIGH 181


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SESECIGH 8
++ CIGH
Sbjct: 174 ADESCIGH 181


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SESECIGH 8
++ CIGH
Sbjct: 174 ADESCIGH 181


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SESECIGH 8
S CIGH
Sbjct: 469 SRGPCIGH 476


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SESECIGH 8
++ CIGH
Sbjct: 174 ADESCIGH 181


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SESECIGH 8
S CIGH
Sbjct: 469 SRGPCIGH 476


>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SESECIGHF 9
+E C+GH
Sbjct: 174 AEKSCVGHI 182


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 1 SESECIGH 8
S CIGH
Sbjct: 469 SRGPCIGH 476


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 1 SESECIGH 8
S CIGH
Sbjct: 469 SRGPCIGH 476




355|Sequence|1771|1780|IGHFKLIFSL

>sp|TPIS_THEAC|TRIOSEPHOSPHATE isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GHFKLIFS 9
G F+LIFS
Sbjct: 31 GKFELIFS 38




356|Sequence|1776|1785|LIFSLLRVHG

>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus

Query: 1 LIFSLLRVH 9
++FSL R H
Sbjct: 43 IVFSLFRTH 51


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LIFSLLRVHG 10
+IF L VHG
Sbjct: 281 IIFKALEVHG 290


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 5 LLRVHG 10
LLRVHG
Sbjct: 217 LLRVHG 222


>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 LIFSLLRVHG 10
+IF L VHG
Sbjct: 281 VIFKALEVHG 290


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 LIFSLLRVHG 10
L+FSL HG
Sbjct: 368 LLFSLFASHG 377


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 IFSLLRVHG 10
++S+LR HG
Sbjct: 493 MYSILRRHG 501


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 IFSLLRVH 9
++SLLR H
Sbjct: 159 LYSLLRAH 166


>sp|CDC66_HALSA|ORC1-TYPE DNA replication protein 6|Halobacterium salinarum (strain ATCC

Query: 2 IFSLLRVH 9
++SLLR H
Sbjct: 159 LYSLLRAH 166


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LIFSLLRVH 9
+++SLLR H
Sbjct: 156 VMYSLLRAH 164


>sp|FRXA_PYRFU|PROTEIN FrxA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IFSLLRVH 9
IFSL+RV+
Sbjct: 28 IFSLMRVY 35


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 1 LIFSLLRVH 9
+++SLLR H
Sbjct: 156 VMYSLLRAH 164




357|Sequence|1781|1790|LRVHGAGQVQ

>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 4 HGAGQVQ 10
HGAG+VQ
Sbjct: 793 HGAGRVQ 799


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 HGAGQVQ 10
HGAG+VQ
Sbjct: 793 HGAGRVQ 799


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RVHGAGQVQ 10
R HG+G+VQ
Sbjct: 784 RNHGSGRVQ 792


>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 2 RVHGAGQVQ 10
RVH A Q+Q
Sbjct: 323 RVHHASQLQ 331


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 LRVHGAGQV 9
+R HG G++
Sbjct: 319 MRYHGGGRI 327


>sp|Y2303_METBF|UPF0758 protein Mbar_A2303|Methanosarcina barkeri (strain Fusaro /

Query: 1 LRVHGAGQVQ 10
++VHG G+ +
Sbjct: 73 MKVHGVGKAK 82


>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 4 HGAGQVQ 10
+GAGQ+Q
Sbjct: 7 YGAGQIQ 13


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 4 HGAGQVQ 10
+GAGQ+Q
Sbjct: 7 YGAGQIQ 13


>sp|Y676_METJA|PUTATIVE hydrogenase expression/formation protein

Query: 2 RVHGAG 7
R+HGAG
Sbjct: 5 RMHGAG 10


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 3 VHGAGQV 9
+HGAG++
Sbjct: 341 IHGAGRI 347


>sp|COFH1_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina acetivorans (strain

Query: 3 VHGAGQV 9
+HGAG++
Sbjct: 341 IHGAGRI 347


>sp|GLYAR_HALSA|GLYCOLALDEHYDE reductase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LRVHGAG 7
LR HGAG
Sbjct: 210 LREHGAG 216




358|Sequence|1786|1795|AGQVQQLALE

***** No hits found ******


359|Sequence|1791|1800|QLALEVVNIV

>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QLALEVVNIV 10
Q ALEV+N V
Sbjct: 375 QTALEVINKV 384


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QLALEVVNIV 10
Q ALEV+N V
Sbjct: 371 QAALEVINKV 380




360|Sequence|1796|1805|VVNIVTSNQD

>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 1 VVNIVTSNQD 10
V+N+ SNQD
Sbjct: 384 VMNLTLSNQD 393


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 1 VVNIVTSNQD 10
V+N+ SNQD
Sbjct: 384 VMNLTLSNQD 393


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 VVNIVTSNQD 10
V+N+ SNQD
Sbjct: 384 VMNLTLSNQD 393


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 1 VVNIVTSNQD 10
V+N+ SNQD
Sbjct: 384 VMNLTLSNQD 393




361|Sequence|1801|1810|TSNQDCVNNI

>sp|FUCA_METM7|L-FUCULOSE phosphate aldolase|Methanococcus maripaludis (strain C7 /

Query: 3 NQDCVNNI 10
N+DCVN I
Sbjct: 78 NKDCVNAI 85


>sp|KTHY_THEVO|PROBABLE thymidylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 DCVNNI 10
DCV+NI
Sbjct: 108 DCVSNI 113


>sp|PYRI_NITMS|ASPARTATE carbamoyltransferase regulatory chain|Nitrosopumilus maritimus

Query: 2 SNQDCVNN 9
SN DCV N
Sbjct: 110 SNPDCVTN 117


>sp|PYRI_PICTO|ASPARTATE carbamoyltransferase regulatory chain|Picrophilus torridus (strain

Query: 2 SNQDCVNN 9
SNQ+C+ N
Sbjct: 106 SNQNCITN 113




362|Sequence|1806|1815|CVNNIAESMV

>sp|CAS6_PYRFU|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CVNNIAESMV 10
CV IAE++V
Sbjct: 86 CVPEIAEALV 95


>sp|COBD_AERPE|PROBABLE cobalamin biosynthesis protein CobD|Aeropyrum pernix (strain ATCC

Query: 1 CVNNIAESMV 10
C+ + AES+V
Sbjct: 153 CIESTAESLV 162


>sp|TPIS_METS3|TRIOSEPHOSPHATE isomerase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CVNNIAES 8
C NNIA S
Sbjct: 120 CTNNIATS 127




363|Sequence|1811|1820|AESMVLSSLL

***** No hits found ******


364|Sequence|1816|1825|LSSLLALLHS

>sp|RFCS_METHJ|REPLICATION factor C small subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SSLLALLH 9
SSL ALLH
Sbjct: 249 SSLQALLH 256




365|Sequence|1821|1830|ALLHSLPSSR

>sp|OTC_METVS|ORNITHINE carbamoyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LLHSLPSSR 10
+LH LP++R
Sbjct: 259 VLHCLPANR 267


>sp|OTC_METMP|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LLHSLPSSR 10
+LH LP++R
Sbjct: 259 VLHCLPANR 267


>sp|DHQS_CENSY|3-DEHYDROQUINATE synthase|Cenarchaeum symbiosum (strain A)

Query: 3 LHSLPSSR 10
+HS PSSR
Sbjct: 36 MHSSPSSR 43


>sp|OTC_METM5|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 LLHSLPSSR 10
+LH LP++R
Sbjct: 259 VLHCLPANR 267


>sp|OTC_METM7|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 LLHSLPSSR 10
+LH LP++R
Sbjct: 259 VLHCLPANR 267


>sp|RS5_METB6|SMALL ribosomal subunit protein uS5|Methanoregula boonei (strain DSM

Query: 1 ALLHSLP 7
A+LHS+P
Sbjct: 124 AVLHSIP 130




366|Sequence|1826|1835|LPSSRQLVLE

>sp|DHQS_CENSY|3-DEHYDROQUINATE synthase|Cenarchaeum symbiosum (strain A)

Query: 2 PSSRQLVLE 10
PSSR +VLE
Sbjct: 40 PSSRYVVLE 48


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 1 LPSSRQLVLE 10
LPS +Q VLE
Sbjct: 292 LPSQQQRVLE 301


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PSSRQLVLE 10
PS R+LV E
Sbjct: 5 PSDRELVTE 13


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 LPSSRQLVLE 10
LP S +L+LE
Sbjct: 486 LPESERLILE 495


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LPSSRQLVLE 10
LP R+L+L+
Sbjct: 546 LPEERELILK 555




367|Sequence|1831|1840|QLVLETLYAL

***** No hits found ******


368|Sequence|1836|1845|TLYALTSSTK

>sp|CDC6B_HALMA|ORC1-TYPE DNA replication protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 TLYALTS 7
TLYALT+
Sbjct: 301 TLYALTT 307




369|Sequence|1841|1850|TSSTKIIKEA

>sp|RIBL_METLZ|FAD synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TSSTKIIKEA 10
TSSTKII EA
Sbjct: 125 TSSTKIIDEA 134




370|Sequence|1846|1855|IIKEAMAKGA

>sp|AGL16_SULAC|ARCHAEAL glycosylation protein 16|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IIKEAMAKG 9
+IKEAM +G
Sbjct: 269 VIKEAMVRG 277


>sp|FAEHP_METPE|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IIKEAMAKGA 10
++KEA+A GA
Sbjct: 344 VVKEALASGA 353


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius (strain

Query: 4 EAMAKGA 10
EAMAKGA
Sbjct: 156 EAMAKGA 162


>sp|DPHB_METST|DIPHTHINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IIKEAMAK 8
IIKEAM K
Sbjct: 68 IIKEAMTK 75


>sp|METE_AERPE|METHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 IKEAMAKGA 10
I EA+A+GA
Sbjct: 169 IDEALARGA 177


>sp|Y789_METJA|UNCHARACTERIZED protein MJ0789|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IIKEAMAKG 9
IIKE++ KG
Sbjct: 94 IIKESVVKG 102


>sp|PDXT_METMA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina mazei (strain

Query: 2 IKEAMAKG 9
IKEA AKG
Sbjct: 70 IKEAAAKG 77




371|Sequence|1851|1860|MAKGALIYLL

>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MAKGALIYLL 10
+AK LIYLL
Sbjct: 189 LAKEKLIYLL 198


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KGALIYL 9
+GALIYL
Sbjct: 85 QGALIYL 91


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 AKGALIYL 9
AKGALI++
Sbjct: 284 AKGALIHI 291


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MAKGALIYLL 10
+AKG +YL+
Sbjct: 412 IAKGGYLYLM 421


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MAKGALIYL 9
MA GAL+Y+
Sbjct: 358 MAMGALLYM 366


>sp|HACA_METAC|PROBABLE methanogen homoaconitase large subunit|Methanosarcina acetivorans

Query: 1 MAKGALIY 8
M KG IY
Sbjct: 395 MGKGGFIY 402




372|Sequence|1856|1865|LIYLLDMFCN

>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 1 LIYLLDMFCN 10
IY +D FCN
Sbjct: 6 FIYKIDSFCN 15


>sp|Y1213_ARCFU|UNCHARACTERIZED protein AF_1213|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIYLLDMFCN 10
L +LLDM C+
Sbjct: 133 LRFLLDMLCD 142




373|Sequence|1861|1870|DMFCNSTHPQ

>sp|CBIJ_METMI|COBALT-PRECORRIN-6A reductase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 DMFCNSTHP 9
D+F ++THP
Sbjct: 68 DVFIDATHP 76


>sp|RS4_THESM|SMALL ribosomal subunit protein uS4|Thermococcus sibiricus (strain DSM

Query: 3 FCNSTHPQ 10
F NS HP+
Sbjct: 160 FANSQHPE 167


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 FCNSTHP 9
+CN +HP
Sbjct: 170 YCNLSHP 176


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 2 MFCNSTHP 9
+ CN HP
Sbjct: 28 ILCNEVHP 35


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 CNSTH 8
CNSTH
Sbjct: 438 CNSTH 442


>sp|RNP1_PYRFU|RIBONUCLEASE P protein component 1|Pyrococcus furiosus (strain ATCC 43587

Query: 5 NSTHP 9
NSTHP
Sbjct: 57 NSTHP 61


>sp|PCNA_THEAC|DNA polymerase sliding clamp|Thermoplasma acidophilum (strain ATCC

Query: 1 DMFCNST 7
DM CN+T
Sbjct: 181 DMSCNTT 187


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 3 FCNSTHPQ 10
FCN+T Q
Sbjct: 455 FCNNTERQ 462


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 MFCNSTH 8
M CN TH
Sbjct: 398 MNCNKTH 404


>sp|RL40_HALWD|LARGE ribosomal subunit protein eL40|Haloquadratum walsbyi (strain DSM

Query: 2 MFCNSTHPQ 10
M CN+ +PQ
Sbjct: 18 MRCNARNPQ 26




374|Sequence|1866|1875|STHPQVRAQT

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 3 HPQVRAQT 10
+PQ+RA+T
Sbjct: 6739 YPQLRAET 6746


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 STHPQVRAQT 10
+THP+V+ T
Sbjct: 240 NTHPRVKIHT 249


>sp|SUCC_DESA1|SUCCINATE--COA ligase [ADP-forming] subunit beta|Desulfurococcus amylolyticus

Query: 2 THPQVRA 8
THP+V+A
Sbjct: 299 THPRVKA 305


>sp|RNP3_HALMA|RIBONUCLEASE P protein component 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 STHPQVRA 8
STH Q+RA
Sbjct: 173 STHLQIRA 180




375|Sequence|1871|1880|VRAQTAELFA

>sp|GLMS_PYRAE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrobaculum aerophilum (strain ATCC

Query: 4 QTAELFA 10
QT+ELFA
Sbjct: 560 QTSELFA 566




376|Sequence|1876|1885|AELFAKMTAD

>sp|PSA2_HALVD|PROTEASOME subunit alpha 2|Haloferax volcanii (strain ATCC 29605

Query: 1 AELFAKMTAD 10
AELFA TAD
Sbjct: 229 AELFADATAD 238




377|Sequence|1881|1890|KMTADKLIGP

>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 1 KMTADKLIG 9
KMT DKL G
Sbjct: 360 KMTQDKLKG 368


>sp|HISX_METKA|HISTIDINOL dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 MTADKLIGP 10
+ DK++GP
Sbjct: 203 LRVDKIVGP 211


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 1 KMTADKLI 8
K+TAD+LI
Sbjct: 32 KITADELI 39




378|Sequence|1886|1895|KLIGPKVRIT

>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 KLIGPKV 7
KL+GPKV
Sbjct: 712 KLVGPKV 718


>sp|FLAB4_THEKO|FLAGELLIN B4|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IGPKVRIT 10
IGP RIT
Sbjct: 183 IGPSTRIT 190


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus

Query: 1 KLIGPKVRI 9
+L+GPK R+
Sbjct: 84 QLLGPKYRV 92


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 1 KLIGPK 6
KLIGPK
Sbjct: 101 KLIGPK 106


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LIGPKVRI 9
LIG KVR+
Sbjct: 231 LIGKKVRV 238


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KLIGPKVR 8
K +GPK+R
Sbjct: 369 KRVGPKLR 376


>sp|Y877_ARCFU|UNCHARACTERIZED protein AF_0877|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLIGPKVRIT 10
+L+G K RIT
Sbjct: 42 RLVGAKRRIT 51




379|Sequence|1891|1900|KVRITLMKFL

>sp|GATD_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina acetivorans (strain

Query: 1 KVRITLMK 8
KVRITL++
Sbjct: 46 KVRITLLE 53




380|Sequence|1896|1905|LMKFLPSVFM

>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LMKFLPSV 8
LM+FLPS+
Sbjct: 237 LMQFLPSL 244


>sp|RFHPS_ARCFU|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LMKFLPSV 8
LMK LP+V
Sbjct: 213 LMKMLPAV 220


>sp|MPTN_METJA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KFLPSVFM 10
KFL SVF+
Sbjct: 97 KFLTSVFL 104


>sp|HMEC_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus fulgidus

Query: 4 FLPSVFM 10
F+PSV+M
Sbjct: 144 FIPSVYM 150




381|Sequence|1901|1910|PSVFMDAMRD

>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PSVFMDAMRD 10
P + MD +RD
Sbjct: 158 PDILMDEVRD 167


>sp|CARA_PYRAE|CARBAMOYL phosphate synthase small chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 PSVFMDAMR 9
P+V M+A+R
Sbjct: 128 PAVLMEALR 136


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 2 SVFMDAMRD 10
++FM AMRD
Sbjct: 308 AIFMYAMRD 316


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 1 PSVFMDAMRD 10
P + M+AMR+
Sbjct: 97 PGMLMEAMRN 106


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 VFMDAMRD 10
+F++AM+D
Sbjct: 69 IFLEAMKD 76


>sp|TRPA_HALSA|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 700922

Query: 1 PSVFMDAMRD 10
PSV D +RD
Sbjct: 248 PSVVADRLRD 257


>sp|TRPA_HALS3|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 29341

Query: 1 PSVFMDAMRD 10
PSV D +RD
Sbjct: 248 PSVVADRLRD 257


>sp|Y1675_ARCFU|UNCHARACTERIZED protein AF_1675|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VFMDAMRD 10
V++DAMR+
Sbjct: 83 VYVDAMRE 90




382|Sequence|1906|1915|DAMRDNPEAA

>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 2 AMRDNPEA 9
A+RDNPEA
Sbjct: 336 AVRDNPEA 343


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 2 AMRDNPEA 9
A+R+NPEA
Sbjct: 336 AVRNNPEA 343


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 3 MRDNPEA 9
+RDNP A
Sbjct: 337 LRDNPSA 343


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DAMRDNPE 8
+A+R+NPE
Sbjct: 7 EALRNNPE 14


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 MRDNPE 8
+RDNPE
Sbjct: 9 LRDNPE 14


>sp|THSB_THEAC|THERMOSOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DAMRDNPEAA 10
DAM++N EAA
Sbjct: 21 DAMKENIEAA 30


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DAMRDNPEA 9
+ +R NPEA
Sbjct: 8 ELLRSNPEA 16


>sp|SERB_HALS3|PHOSPHOSERINE phosphatase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DAMRDNPEAA 10
DA+RD EAA
Sbjct: 143 DALRDACEAA 152


>sp|RNP3_METTH|RIBONUCLEASE P protein component 3|Methanothermobacter thermautotrophicus

Query: 1 DAMRDNPE 8
+++R+NPE
Sbjct: 55 ESLRENPE 62


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AMRDNPE 8
A+R+NPE
Sbjct: 7 AVRENPE 13


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DAMRDNPEA 9
D DNPEA
Sbjct: 134 DKQSDNPEA 142




383|Sequence|1911|1920|NPEAAVHIFE

>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NPEAAVHIFE 10
NPE A +FE
Sbjct: 276 NPERAAEVFE 285


>sp|Y931_METLZ|UPF0212 protein Mlab_0931|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 NPEAAVHI 8
NPE AVHI
Sbjct: 83 NPEHAVHI 90


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 2 PEAAVHIF 9
PE A HIF
Sbjct: 28 PEMAAHIF 35


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PEAAVHIFE 10
PE A+H++E
Sbjct: 221 PEKALHVWE 229


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PEAAVHIFE 10
PE A+H++E
Sbjct: 221 PEKALHVWE 229


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 PEAAVHIFE 10
PE A+H++E
Sbjct: 221 PEKALHVWE 229


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NPEAAVHIFE 10
+P+A HIFE
Sbjct: 664 DPDAVRHIFE 673


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PEAAVHIFE 10
PE A+H++E
Sbjct: 221 PEKALHVWE 229


>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila (strain

Query: 1 NPEAAVHI 8
NPE VH+
Sbjct: 180 NPEVVVHL 187


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 1 NPEAAVHI 8
NPEA +H+
Sbjct: 304 NPEADIHL 311


>sp|CPGS_PYRAB|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 NPEAAVHI 8
NP+A VH+
Sbjct: 301 NPDADVHL 308


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 1 NPEAAVHI 8
NP+A +H+
Sbjct: 305 NPDADIHL 312


>sp|THII_SULTO|PROBABLE tRNA sulfurtransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NPEAAVHI 8
NPE +H+
Sbjct: 133 NPEIEIHV 140


>sp|CPGS_THESM|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus sibiricus (strain

Query: 1 NPEAAVHI 8
NP+A +H+
Sbjct: 305 NPDAEIHL 312


>sp|THIOL_METTH|ACETYL-COA acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 AAVHIF 9
AAVHIF
Sbjct: 376 AAVHIF 381


>sp|MTRA_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanopyrus kandleri (strain AV19

Query: 1 NPEAAVHIF 9
+PEA VH+
Sbjct: 22 DPEAPVHVV 30


>sp|GPMI_HALSA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Halobacterium salinarum (strain ATCC 700922

Query: 3 EAAVHIF 9
EAAVH F
Sbjct: 139 EAAVHAF 145




384|Sequence|1916|1925|VHIFEGTHEN

>sp|THIE_THEAC|THIAMINE-PHOSPHATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VHIFEGTHE 9
+H+ EG H+
Sbjct: 146 IHVLEGIHK 154


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 1 VHIFEGTHE 9
V +FEGT +
Sbjct: 55 VQVFEGTRD 63


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 1 VHIFEGTHE 9
V +FEGT +
Sbjct: 57 VQVFEGTRD 65


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 1 VHIFEGTHE 9
V +FEGT +
Sbjct: 57 VQVFEGTRD 65


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM

Query: 1 VHIFEGTHE 9
V +FEGT +
Sbjct: 55 VQVFEGTRD 63


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VHIFEGTHE 9
V +FEGT +
Sbjct: 57 VQVFEGTRD 65


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VHIFEGTHE 9
V +FEGT +
Sbjct: 54 VQVFEGTRD 62


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 1 VHIFEGTHE 9
V +FEGT +
Sbjct: 54 VQVFEGTRD 62


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 1 VHIFEGTHE 9
V +FEGT +
Sbjct: 55 VQVFEGTRD 63


>sp|Y1453_METJA|UNCHARACTERIZED protein MJ1453|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VHIFEGTH 8
+H+F G+H
Sbjct: 31 MHLFSGSH 38


>sp|HMC1C_METSH|CHROMOSOMAL protein MC1c|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 VHIFEG 6
VHIF+G
Sbjct: 50 VHIFQG 55


>sp|CBIM1_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain

Query: 1 VHIFEG 6
+HIFEG
Sbjct: 1 MHIFEG 6


>sp|HIS8_THEGJ|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VHIFEGTH 8
V +FEG H
Sbjct: 89 VRLFEGNH 96


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VHIFEGTH 8
VH+F G H
Sbjct: 216 VHLFGGGH 223


>sp|TRUA_METS3|TRNA pseudouridine synthase A|Methanobrevibacter smithii (strain ATCC

Query: 3 IFEGTH 8
IF+GTH
Sbjct: 129 IFKGTH 134


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 FEGTHEN 10
FE TH N
Sbjct: 505 FESTHRN 511


>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 IFEGTHE 9
+F+GTH+
Sbjct: 114 LFKGTHD 120


>sp|KAE1B_METBF|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 FEGTHEN 10
FE TH N
Sbjct: 503 FESTHRN 509




385|Sequence|1921|1930|GTHENPELIW

>sp|LYSY_PYRAB|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 GTHENPELI 9
G+HE PELI
Sbjct: 108 GSHEKPELI 116


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 GTHENPE 7
GTHENPE
Sbjct: 17 GTHENPE 23


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 GTHENPE 7
GTHENPE
Sbjct: 17 GTHENPE 23


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 GTHENPELI 9
G HE PELI
Sbjct: 108 GKHERPELI 116


>sp|LYSY_PYRFU|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 GTHENPELI 9
G HE PELI
Sbjct: 108 GPHEKPELI 116


>sp|CBPX2_SACS2|THERMOSTABLE carboxypeptidase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HENPEL 8
HENPEL
Sbjct: 26 HENPEL 31


>sp|GGGPS_METAR|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GTHENPELI 9
GT+ NPEL+
Sbjct: 165 GTYGNPELV 173


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GTHENPELIW 10
G E PE++W
Sbjct: 479 GNPETPEILW 488


>sp|GGGPS_ARCFU|GERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GTHENPELI 9
GT+ NPEL+
Sbjct: 170 GTYGNPELV 178


>sp|LYSY_THEKO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 GTHENPELI 9
G H+ PELI
Sbjct: 108 GEHKRPELI 116


>sp|RS2_STAMF|SMALL ribosomal subunit protein uS2|Staphylothermus marinus (strain ATCC

Query: 1 GTHENPELIW 10
GT NP L W
Sbjct: 118 GTFTNPSLKW 127


>sp|RS2_HYPBU|SMALL ribosomal subunit protein uS2|Hyperthermus butylicus (strain DSM

Query: 1 GTHENPELIW 10
GT NP L W
Sbjct: 113 GTFTNPSLEW 122


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 1 GTHENPELIW 10
G E PE+ W
Sbjct: 479 GNPEKPEVFW 488


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GTHENPELIW 10
G E PE+ W
Sbjct: 479 GNPEKPEVFW 488


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 1 GTHENPELIW 10
G E PE+ W
Sbjct: 479 GNPEKPEVFW 488


>sp|Y300_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0300|Methanocaldococcus

Query: 3 HENPELI 9
HENPE I
Sbjct: 88 HENPEGI 94


>sp|SRP54_METVS|SIGNAL recognition particle 54 kDa|Methanococcus vannielii (strain ATCC

Query: 4 ENPELI 9
ENPELI
Sbjct: 386 ENPELI 391


>sp|SRP54_METMP|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain DSM

Query: 4 ENPELI 9
ENPELI
Sbjct: 386 ENPELI 391


>sp|SRP54_METM7|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C7 /

Query: 4 ENPELI 9
ENPELI
Sbjct: 386 ENPELI 391


>sp|SRP54_METM6|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C6 /

Query: 4 ENPELI 9
ENPELI
Sbjct: 386 ENPELI 391


>sp|SRP54_METM5|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C5 /

Query: 4 ENPELI 9
ENPELI
Sbjct: 386 ENPELI 391


>sp|HIS6_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 4 ENPELI 9
ENPELI
Sbjct: 109 ENPELI 114


>sp|RNH2_HYPBU|RIBONUCLEASE HII|Hyperthermus butylicus (strain DSM 5456

Query: 1 GTHENPELIW 10
G H++PE ++
Sbjct: 101 GVHDSPEAVY 110


>sp|RL29_METTH|LARGE ribosomal subunit protein uL29|Methanothermobacter

Query: 1 GTHENP 6
G HENP
Sbjct: 39 GIHENP 44


>sp|RL13_PYRNV|LARGE ribosomal subunit protein uL13|Pyrobaculum neutrophilum (strain

Query: 1 GTHENPE 7
GTH NPE
Sbjct: 74 GTHYNPE 80


>sp|PIP_THEAC|PROLINE iminopeptidase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GTHENPE 7
G++ENPE
Sbjct: 163 GSYENPE 169


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 GTHENPELI 9
G H+N ELI
Sbjct: 215 GKHDNIELI 223


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 GTHENPELI 9
G H+N ELI
Sbjct: 216 GKHDNIELI 224


>sp|MTAA_METBF|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri (strain Fusaro /

Query: 3 HENPELI 9
H NPEL+
Sbjct: 47 HTNPELM 53


>sp|MTAA_METBA|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri

Query: 3 HENPELI 9
H NPEL+
Sbjct: 47 HTNPELM 53


>sp|NPD_PYRHO|NAD-DEPENDENT protein deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 NPELIW 10
NP+L+W
Sbjct: 56 NPKLVW 61


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 ENPELI 9
ENPELI
Sbjct: 50 ENPELI 55


>sp|PDXS_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosphaera stadtmanae

Query: 4 ENPELI 9
ENPEL+
Sbjct: 241 ENPELV 246


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 ENPELI 9
ENPELI
Sbjct: 111 ENPELI 116


>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 5 NPELIW 10
NP+L+W
Sbjct: 56 NPKLVW 61


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 3 HENPELIW 10
HE PE W
Sbjct: 477 HEKPENKW 484


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GTHENPEL 8
GTH +PE+
Sbjct: 252 GTHLDPEI 259


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 6 PELIW 10
PEL+W
Sbjct: 321 PELVW 325


>sp|PRIL_METTH|DNA primase large subunit PriL|Methanothermobacter thermautotrophicus

Query: 1 GTHENPEL 8
G H+ PEL
Sbjct: 371 GVHDMPEL 378


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 HENPELI 9
H++PEL+
Sbjct: 248 HDSPELV 254


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 PELIW 10
PEL+W
Sbjct: 321 PELVW 325


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 ENPELIW 10
E+P+++W
Sbjct: 284 ESPDVVW 290


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTHENPELIW 10
G + PE+ W
Sbjct: 481 GNPDRPEIYW 490


>sp|GLPK_THEKO|GLYCEROL kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 NPELIW 10
NPE IW
Sbjct: 47 NPEEIW 52


>sp|GLPK_THEGJ|GLYCEROL kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 NPELIW 10
NPE IW
Sbjct: 47 NPEEIW 52


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 THENPEL 8
TH+NP L
Sbjct: 257 THKNPAL 263


>sp|GLPK_PYRFU|GLYCEROL kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 NPELIW 10
NPE IW
Sbjct: 47 NPEEIW 52


>sp|Y008_METJA|UNCHARACTERIZED protein MJ0008|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GTHENPELI 9
G H NP+++
Sbjct: 27 GLHYNPKIV 35


>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 THENPEL 8
TH+NP L
Sbjct: 257 THKNPAL 263


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 THENPEL 8
TH+NP L
Sbjct: 257 THKNPAL 263


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GTHENPELIW 10
G+ E P++ W
Sbjct: 475 GSPERPQVYW 484


>sp|GGGPS_METHJ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 NPELIW 10
NP+++W
Sbjct: 105 NPDIVW 110


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 5 NPELIW 10
NPE+ W
Sbjct: 87 NPEVFW 92




386|Sequence|1926|1935|PELIWNDNSR

>sp|Y535_METJA|UNCHARACTERIZED protein MJ0535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELIWNDN 8
E+ WNDN
Sbjct: 174 EIFWNDN 180


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 2 ELIWNDNSR 10
ELIW D S+
Sbjct: 197 ELIWTDISK 205


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ELIWNDNSR 10
E+IW D+S+
Sbjct: 578 EMIWPDHSQ 586


>sp|RSMA_META3|PROBABLE ribosomal RNA small subunit|Methanococcus aeolicus (strain ATCC

Query: 2 ELIWND 7
E+IWND
Sbjct: 78 EIIWND 83


>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELIWND 7
EL WND
Sbjct: 25 ELCWND 30


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PELIW 5
PEL+W
Sbjct: 321 PELVW 325


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PELIW 5
PEL+W
Sbjct: 321 PELVW 325


>sp|Y065_METJA|UNCHARACTERIZED protein MJ0065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LIWNDNS 9
+IWND++
Sbjct: 117 IIWNDDN 123


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC

Query: 3 LIWNDNS 9
+IW DN+
Sbjct: 86 IIWRDNT 92


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ELIWNDNSR 10
+ ++NDN+R
Sbjct: 158 DFLYNDNAR 166


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 4 IWNDN 8
+WNDN
Sbjct: 485 MWNDN 489


>sp|PURQ_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanopyrus kandleri (strain AV19 /

Query: 1 PELIWNDN 8
PE +W+++
Sbjct: 29 PEFVWHED 36




387|Sequence|1931|1940|NDNSRDKVST

>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 1 NDNSRDKVS 9
N+N+R+KV+
Sbjct: 100 NENARNKVN 108


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 NDNSRDKVS 9
NDN DK++
Sbjct: 43 NDNEMDKLA 51


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 NDNSRDKVS 9
NDN +K+S
Sbjct: 348 NDNENEKIS 356


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NDNSRDKVS 9
NDN +K+S
Sbjct: 348 NDNENEKIS 356




388|Sequence|1936|1945|DKVSTTVREM

>sp|NADM_CALMQ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 VSTTVREM 10
VST +REM
Sbjct: 129 VSTRIREM 136


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKVSTTVRE 9
DK++ T+RE
Sbjct: 566 DKLTVTIRE 574




389|Sequence|1941|1950|TVREMMLEHF

>sp|CARA_THEAC|CARBAMOYL phosphate synthase small chain|Thermoplasma acidophilum (strain

Query: 1 TVREMMLEHF 10
T+R+MMLEHF
Sbjct: 179 TLRDMMLEHF 188


>sp|MFNA_METAC|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina acetivorans

Query: 2 VREMMLEHF 10
VRE MLE F
Sbjct: 347 VREQMLERF 355


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 TVREMMLEH 9
TVRE +++H
Sbjct: 79 TVREALVDH 87


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TVREMMLE 8
T+RE MLE
Sbjct: 445 TIREAMLE 452


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus

Query: 2 VREMMLEHF 10
+RE+ EHF
Sbjct: 67 IRELCREHF 75




390|Sequence|1946|1955|MLEHFKNQQD

>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MLEHFKNQQD 10
M+EHFK +++
Sbjct: 149 MIEHFKRRKN 158


>sp|TFE_METMJ|TRANSCRIPTION factor E|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 MLEHFKNQ 8
MLEHF N+
Sbjct: 146 MLEHFDNE 153


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 MLEHFKNQ 8
M++HF+N+
Sbjct: 497 MIKHFENE 504


>sp|Y1371_METJA|UNCHARACTERIZED methyltransferase MJ1371|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MLEHFKNQQD 10
++EHFK D
Sbjct: 155 IVEHFKGNVD 164


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 MLEHFKNQ 8
+LEHFK +
Sbjct: 424 LLEHFKGK 431


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 MLEHFKNQ 8
+LEHFK +
Sbjct: 424 LLEHFKGK 431


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 MLEHFKNQ 8
+LEHFK +
Sbjct: 424 LLEHFKGK 431


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 MLEHFKNQ 8
+LEHFK +
Sbjct: 424 LLEHFKGK 431


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 MLEHFKNQ 8
+LEHFK +
Sbjct: 424 LLEHFKGK 431


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 1 MLEHFKNQ 8
+LEHFK +
Sbjct: 424 LLEHFKGK 431


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 MLEHFKNQ 8
+LEHFK +
Sbjct: 424 LLEHFKGK 431




391|Sequence|1951|1960|KNQQDNPEAN

>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 QQDNPEA 9
Q DNPEA
Sbjct: 136 QSDNPEA 142


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 KNQQDNPEA 9
K +DNPEA
Sbjct: 335 KAVRDNPEA 343




392|Sequence|1956|1965|NPEANWKLPE

>sp|Y664_METJA|UNCHARACTERIZED protein MJ0664|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EANWKLPE 10
E NWK+PE
Sbjct: 39 EQNWKVPE 46


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 1 NPEANWKL 8
NPE WKL
Sbjct: 492 NPEDMWKL 499


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NPEANWKL 8
NPE WKL
Sbjct: 492 NPEDMWKL 499


>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PEANWKLP 9
PE +W++P
Sbjct: 56 PETSWRVP 63


>sp|RS4E_METMP|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 4 ANWKLP 9
ANW+LP
Sbjct: 17 ANWQLP 22


>sp|RS4E_METM7|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 4 ANWKLP 9
ANW+LP
Sbjct: 17 ANWQLP 22


>sp|RS4E_METM6|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 4 ANWKLP 9
ANW+LP
Sbjct: 17 ANWQLP 22


>sp|RS4E_METM5|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 4 ANWKLP 9
ANW+LP
Sbjct: 17 ANWQLP 22


>sp|RS4E_METVS|SMALL ribosomal subunit protein eS4|Methanococcus vannielii (strain

Query: 4 ANWKLP 9
ANW+LP
Sbjct: 17 ANWQLP 22


>sp|RS4E_METVA|SMALL ribosomal subunit protein eS4|Methanococcus vannielii

Query: 4 ANWKLP 9
ANW+LP
Sbjct: 17 ANWQLP 22


>sp|COFC_METLZ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 NPEANWKLPE 10
N NW LP+
Sbjct: 72 NEAINWALPQ 81


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PEANWKL 8
PE++W+L
Sbjct: 225 PESDWRL 231


>sp|GPDA_ARCFU|NADP(+)-DEPENDENT glycerol-3-phosphate dehydrogenase|Archaeoglobus fulgidus (strain

Query: 2 PEANWKL 8
PEA W+L
Sbjct: 118 PEAVWRL 124


>sp|SYDND_METM6|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C6 /

Query: 3 EANWKLPE 10
E NW++PE
Sbjct: 275 ELNWEVPE 282


>sp|SYFB_PYRAE|PHENYLALANINE--TRNA ligase beta subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 EANWKLP 9
EA W LP
Sbjct: 470 EAKWALP 476


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 2 PEANWKLP 9
PE W++P
Sbjct: 53 PETAWRIP 60


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 5 NWKLP 9
NWKLP
Sbjct: 313 NWKLP 317


>sp|SYS_SULTO|SERINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NPEANWKLPE 10
+PE +WKL E
Sbjct: 312 SPEDSWKLHE 321


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC

Query: 6 WKLPE 10
WKLPE
Sbjct: 59 WKLPE 63


>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain

Query: 5 NWKLPE 10
+WK+PE
Sbjct: 83 SWKIPE 88


>sp|SYDND_METMP|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 EANWKLPE 10
E NW++PE
Sbjct: 275 ELNWEIPE 282


>sp|CBID_METBF|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NPEANWKLPE 10
+P N+K+PE
Sbjct: 3 DPVNNFKIPE 12


>sp|SYDND_METM5|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C5 /

Query: 3 EANWKLPE 10
E NW++PE
Sbjct: 275 ELNWEIPE 282


>sp|SYDND_METM7|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C7 /

Query: 3 EANWKLPE 10
E NW++PE
Sbjct: 275 ELNWEIPE 282


>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain

Query: 2 PEANWKLP 9
PE W++P
Sbjct: 53 PETAWEIP 60


>sp|CBID_METMA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NPEANWKLPE 10
+P N+K+PE
Sbjct: 3 DPVNNFKIPE 12


>sp|CRUF_HALJT|BISANHYDROBACTERIORUBERIN hydratase|Haloarcula japonica (strain ATCC 49778

Query: 4 ANWKLPE 10
A W LPE
Sbjct: 10 AGWTLPE 16


>sp|CSG_METAC|MAJOR S-layer protein|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NPEANW 6
NP+A W
Sbjct: 109 NPDAGW 114


Query: 1 NPEANW 6
NP+A W
Sbjct: 386 NPDAGW 391


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PEANWKLPE 10
PE +WK+ E
Sbjct: 293 PEDSWKIHE 301


>sp|CBID_METAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 NPEANWKLPE 10
+P N+K+PE
Sbjct: 3 DPVNNFKIPE 12


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 5 NWKLPE 10
+WKLPE
Sbjct: 63 DWKLPE 68


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NPEANW 6
NPEA W
Sbjct: 272 NPEAEW 277


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NPEANW 6
NPEA W
Sbjct: 262 NPEAEW 267


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NPEANW 6
NPEA W
Sbjct: 268 NPEAEW 273


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 NWKLP 9
NWK+P
Sbjct: 467 NWKVP 471


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PEANWKLP 9
P+ WK P
Sbjct: 99 PKGKWKTP 106


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NPEANW 6
NPEA W
Sbjct: 271 NPEAPW 276


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NPEANW 6
NPEA W
Sbjct: 268 NPEAEW 273




393|Sequence|1961|1970|WKLPEDFAVV

>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 3 LPEDFAVV 10
LPEDF V+
Sbjct: 26 LPEDFVVI 33


>sp|Y664_METJA|UNCHARACTERIZED protein MJ0664|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WKLPEDF 7
WK+PE F
Sbjct: 42 WKVPEGF 48


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 WKLPEDF 7
W+LPED+
Sbjct: 16 WELPEDY 22


>sp|RL15E_METHJ|LARGE ribosomal subunit protein eL15|Methanospirillum hungatei JF-1

Query: 1 WKLPEDFAV 9
WK+P+D V
Sbjct: 13 WKIPDDTGV 21


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WKLPEDF 7
W+LP+D+
Sbjct: 13 WELPKDY 19


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain

Query: 2 KLPEDFAV 9
KLP D+AV
Sbjct: 19 KLPADYAV 26


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 WKLPEDF 7
WKLPE++
Sbjct: 64 WKLPENW 70


>sp|CAS1_METJA|CRISPR-ASSOCIATED endonuclease Cas1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LPEDFAVV 10
LP+DF +V
Sbjct: 164 LPDDFKIV 171


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain

Query: 2 KLPEDFAV 9
K PEDF V
Sbjct: 21 KYPEDFIV 28


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 2 KLPEDFAV 9
K PEDF V
Sbjct: 21 KYPEDFIV 28


>sp|TRUD_META3|PROBABLE tRNA pseudouridine synthase D|Methanococcus aeolicus (strain ATCC

Query: 2 KLPEDFAV 9
K PEDF V
Sbjct: 20 KYPEDFIV 27


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 2 KLPEDFAV 9
K PEDF V
Sbjct: 21 KYPEDFIV 28


>sp|RS3_METB6|SMALL ribosomal subunit protein uS3|Methanoregula boonei (strain DSM

Query: 2 KLPEDFAVV 10
K+P+ FA++
Sbjct: 188 KMPDHFAII 196


>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LPEDFAVV 10
LPE+F +V
Sbjct: 164 LPEEFKIV 171


>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 1 WKLPEDFAVV 10
WKLP++ +++
Sbjct: 292 WKLPDEESII 301


>sp|DYRB_HALVO|DIHYDROFOLATE reductase HdrB|Haloferax volcanii (Halobacterium volcanii)

Query: 1 WKLPEDF 7
W LPED
Sbjct: 39 WHLPEDL 45


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 3 LPEDFAVV 10
PEDF +V
Sbjct: 327 FPEDFLIV 334


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LPEDFAVV 10
+PE+FAV+
Sbjct: 956 MPENFAVI 963


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii

Query: 2 KLPEDFAV 9
K PEDF V
Sbjct: 20 KYPEDFIV 27


>sp|TRUD_THEKO|PROBABLE tRNA pseudouridine synthase D|Thermococcus kodakarensis (strain

Query: 4 PEDFAVV 10
PEDF V+
Sbjct: 27 PEDFIVI 33


>sp|RNP1_PYRHO|RIBONUCLEASE P protein component 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WKLPEDFAV 9
WK+P+D +
Sbjct: 86 WKVPKDVCI 94


>sp|SYC_METM7|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 KLPEDFAV 9
K PEDFA+
Sbjct: 175 KNPEDFAL 182


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 KLPEDFAV 9
K PEDFA+
Sbjct: 175 KNPEDFAL 182


>sp|GCST_HALSA|PROBABLE aminomethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 WKLPEDF 7
W +P DF
Sbjct: 25 WNMPVDF 31


>sp|GCST_HALS3|PROBABLE aminomethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 WKLPEDF 7
W +P DF
Sbjct: 25 WNMPVDF 31


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 EDFAVV 10
EDFAVV
Sbjct: 60 EDFAVV 65


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 KLPEDFAV 9
K PEDFA+
Sbjct: 176 KNPEDFAL 183


>sp|RNP1_PYRAB|RIBONUCLEASE P protein component 1|Pyrococcus abyssi (strain GE5 /

Query: 1 WKLPEDFAV 9
WK+P+D +
Sbjct: 86 WKVPKDVCI 94


>sp|RNP1_PYRFU|RIBONUCLEASE P protein component 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WKLPEDFAV 9
WK+P+D +
Sbjct: 87 WKVPKDVCI 95


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KLPEDFAV 9
K PEDFA+
Sbjct: 176 KNPEDFAL 183


>sp|Y362_METJA|UNCHARACTERIZED protein MJ0362|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WKLPEDFAV 9
W+LP+D +
Sbjct: 8 WRLPKDATI 16


>sp|DNAG_PYRIL|DNA primase DnaG|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KLPEDFAVV 10
K+PED +V
Sbjct: 388 KVPEDMKIV 396


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 KLPEDFAV 9
++PEDF V
Sbjct: 507 EIPEDFRV 514


>sp|DNAG_PYRCJ|DNA primase DnaG|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KLPEDFAVV 10
K+PED +V
Sbjct: 390 KVPEDLKIV 398


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KLPEDFAV 9
K PEDFA+
Sbjct: 176 KNPEDFAL 183


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KLPEDFAV 9
K PEDFA+
Sbjct: 175 KNPEDFAL 182


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KLPEDFAV 9
K PEDFA+
Sbjct: 176 KNPEDFAL 183


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 WKLPEDFA 8
W+L DFA
Sbjct: 220 WRLQRDFA 227


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WKLPEDFA 8
W+L DFA
Sbjct: 221 WRLQRDFA 228


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 WKLPEDFA 8
W+L DFA
Sbjct: 221 WRLQRDFA 228


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WKLPEDFA 8
W+L DFA
Sbjct: 221 WRLQRDFA 228


>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WKLPEDFA 8
W+L DFA
Sbjct: 220 WRLQRDFA 227


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 2 KLPEDFAVV 10
+LP DF VV
Sbjct: 246 ELPADFVVV 254


>sp|GINS_METJA|PROBABLE DNA replication complex GINS|Methanocaldococcus jannaschii

Query: 2 KLPEDF 7
KLP+DF
Sbjct: 44 KLPDDF 49


>sp|PURO_THEKO|IMP cyclohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KLPEDFAVV 10
+L ED+AVV
Sbjct: 59 RLMEDYAVV 67


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 KLPEDF 7
KLP+DF
Sbjct: 539 KLPQDF 544


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WKLPEDF 7
WK+ E+F
Sbjct: 755 WKIKEEF 761




394|Sequence|1966|1975|DFAVVFGEAE

>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DFAVVFGEAE 10
DFAV+FGE +
Sbjct: 384 DFAVIFGERD 393


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DFAVVFGEAE 10
DFAV+ GE E
Sbjct: 367 DFAVLIGERE 376


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DFAVVFG 7
+FAVVFG
Sbjct: 177 NFAVVFG 183


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DFAVVFG 7
+FAVVFG
Sbjct: 177 NFAVVFG 183


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 1 DFAVVFG 7
+FAVVFG
Sbjct: 181 NFAVVFG 187


>sp|AMZA_METJA|ARCHAEMETZINCIN jannaschii (strain ATCC 43067

Query: 5 VFGEAE 10
VFGEAE
Sbjct: 86 VFGEAE 91


>sp|AMZA_ARCFU|ARCHAEMETZINCIN fulgidus (strain ATCC 49558

Query: 5 VFGEAE 10
VFGEAE
Sbjct: 81 VFGEAE 86


>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DFAVVFGEAE 10
FAVV GE E
Sbjct: 368 SFAVVIGEKE 377


>sp|FTRL_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Archaeoglobus fulgidus (strain

Query: 3 AVVFGEAE 10
+ VFGEAE
Sbjct: 46 STVFGEAE 53


>sp|Y1384_THEVO|PROTEIN TV1384|Thermoplasma volcanium (strain ATCC 51530

Query: 3 AVVFGEAE 10
A+VFGE E
Sbjct: 186 AIVFGEIE 193


>sp|GAL1_PYRFU|GALACTOKINASE furiosus (strain ATCC 43587

Query: 2 FAVVFGEAE 10
FAVVFG+ +
Sbjct: 153 FAVVFGKKD 161


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 1 DFAVVFG 7
DFAVVF
Sbjct: 180 DFAVVFA 186


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 700922

Query: 1 DFAVVFG 7
+FAVVFG
Sbjct: 182 EFAVVFG 188


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 1 DFAVVFG 7
+FAVVFG
Sbjct: 182 EFAVVFG 188


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 2 FAVVFG 7
FAVVFG
Sbjct: 180 FAVVFG 185


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DFAVVFG 7
+FAV+FG
Sbjct: 182 EFAVIFG 188


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DFAVVFG 7
DFAVVF
Sbjct: 180 DFAVVFA 186


>sp|DHQS_HALMA|3-DEHYDROQUINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DFAVVFGE 8
DF +V GE
Sbjct: 133 DFTIVIGE 140


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DFAVVFG 7
+FAV+FG
Sbjct: 182 EFAVIFG 188


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DFAVVFG 7
+FAV+FG
Sbjct: 183 EFAVIFG 189




395|Sequence|1971|1980|FGEAEGELAV

>sp|FTRL_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Archaeoglobus fulgidus (strain

Query: 1 FGEAEG 6
FGEAEG
Sbjct: 49 FGEAEG 54


>sp|PMDHS_THEON|PHOSPHOMEVALONATE dehydratase small subunit|Thermococcus onnurineus (strain NA1)

Query: 2 GEAEGELAV 10
G+AEGEL V
Sbjct: 11 GKAEGELIV 19


>sp|PMDHS_THEGJ|PHOSPHOMEVALONATE dehydratase small subunit|Thermococcus gammatolerans (strain DSM

Query: 2 GEAEGELAV 10
G+AEGEL V
Sbjct: 11 GKAEGELIV 19


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 FGEAEGELA 9
FG +GELA
Sbjct: 232 FGRLDGELA 240




396|Sequence|1976|1985|GELAVGGVFL

>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GELAVGGVFL 10
G + +GGVFL
Sbjct: 6 GAILIGGVFL 15


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 1 GELAVGGVF 9
GE+AVG +F
Sbjct: 306 GEIAVGRLF 314


>sp|Y758_ARCFU|UNCHARACTERIZED protein AF_0758|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GELAVGG 7
GEL++GG
Sbjct: 202 GELSIGG 208


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 ELAVGGV 8
ELA+GGV
Sbjct: 327 ELALGGV 333


>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ELAVGGV 8
ELA+GGV
Sbjct: 326 ELALGGV 332


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ELAVGGV 8
ELA+GGV
Sbjct: 327 ELALGGV 333


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ELAVGGV 8
ELA+GGV
Sbjct: 327 ELALGGV 333


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GELAVGGVF 9
GE+A+G +F
Sbjct: 306 GEIAIGRLF 314


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GELAVGGVF 9
GE+A+G +F
Sbjct: 306 GEIAIGRLF 314


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GELAVGGV 8
GEL GGV
Sbjct: 16 GELVAGGV 23




397|Sequence|1981|1990|GGVFLRIFIA

>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GGVFLRIF 8
GGVFL++F
Sbjct: 194 GGVFLKMF 201


>sp|ASPGP_PYRAB|PLANT-TYPE L-asparaginase|Pyrococcus abyssi (strain GE5 /

Query: 1 GGVFLRIF 8
GGVFL++F
Sbjct: 193 GGVFLKMF 200


>sp|ASPGP_THEKO|PLANT-TYPE L-asparaginase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GGVFLRIF 8
GGVFL++F
Sbjct: 194 GGVFLKMF 201


>sp|ASPGP_PYRHO|PLANT-TYPE L-asparaginase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GGVFLRIF 8
GGVFL++F
Sbjct: 193 GGVFLKMF 200


>sp|Y1344_SULAC|PUTATIVE HTH-type transcriptional regulatory protein|Sulfolobus

Query: 1 GGVFLRI 7
GG+F+R+
Sbjct: 117 GGIFVRV 123




398|Sequence|1986|1995|RIFIAQPAWV

>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FIAQPAWV 10
F+ QP WV
Sbjct: 218 FVPQPYWV 225


>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 FIAQPAWV 10
F+A P+W+
Sbjct: 244 FVAAPSWI 251


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 RIFIAQPAWV 10
++ I+QP WV
Sbjct: 678 KLGISQPNWV 687


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 RIFIAQPAWV 10
++ I+QP WV
Sbjct: 678 KLGISQPNWV 687


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 RIFIAQPAWV 10
++ I+QP WV
Sbjct: 678 KLGISQPNWV 687


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 RIFIAQPAWV 10
++ I+QP WV
Sbjct: 678 KLGISQPNWV 687


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 RIFIAQPAWV 10
++ I+QP WV
Sbjct: 678 KLGISQPNWV 687


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 RIFIAQPAWV 10
++ I+QP WV
Sbjct: 678 KLGISQPNWV 687


>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 3 FIAQPAWV 10
F+A P WV
Sbjct: 244 FLAAPEWV 251


>sp|PEPQ_PYRFU|XAA-PRO dipeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RIFIAQP 7
R+FIA+P
Sbjct: 19 RVFIAKP 25


>sp|RS15_THEAC|SMALL ribosomal subunit protein uS15|Thermoplasma acidophilum (strain

Query: 1 RIFIAQPAWV 10
+++ QP+W+
Sbjct: 16 KVYGVQPSWI 25


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RIFIAQPAW 9
R+F PAW
Sbjct: 201 RVFEVAPAW 209


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 IAQPAW 9
IAQP W
Sbjct: 177 IAQPRW 182


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 IAQPAW 9
IAQP W
Sbjct: 49 IAQPRW 54


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 RIFIAQPAWV 10
++ I+QP W+
Sbjct: 678 KLGISQPDWI 687


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RIFIAQPAW 9
R+F PAW
Sbjct: 201 RVFEIAPAW 209


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 1 RIFIAQPAW 9
R+F A+P W
Sbjct: 418 RLFHARPHW 426


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 2 IFIAQPAWV 10
++IA P W+
Sbjct: 278 VYIAGPLWL 286


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 RIFIAQPAWV 10
R+ I QP W+
Sbjct: 665 RLGIKQPPWL 674


>sp|CDPAS_HALMA|CDP-ARCHAEOL synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 FIAQPAW 9
F+A P+W
Sbjct: 137 FVAAPSW 143


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 2 IFIAQPAWV 10
+ A PAW+
Sbjct: 291 VVAADPAWI 299




399|Sequence|1991|2000|QPAWVLRKPR

>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 2 PAWVLRKP 9
P WV RKP
Sbjct: 122 PDWVARKP 129


>sp|Y282_ARCFU|UPF0212 protein AF_0282|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QPAWVLRKPR 10
Q AW++RK R
Sbjct: 9 QAAWIVRKAR 18


>sp|UDGA_PYRAE|TYPE-4 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QPAWVLRKP 9
PA VLRKP
Sbjct: 162 HPAAVLRKP 170


>sp|KADA_METMJ|ADENYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PAWVLRK 8
P WVLR+
Sbjct: 106 PEWVLRE 112


>sp|KADA_THEAC|ADENYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PAWVLRK 8
P WVLR+
Sbjct: 95 PEWVLRE 101


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 WVLRKPR 10
W +RKPR
Sbjct: 182 WPIRKPR 188


>sp|AATE_THEGJ|A-TYPE ATP synthase subunit E|Thermococcus gammatolerans (strain DSM

Query: 1 QPAWVLRKPR 10
Q W+LRK +
Sbjct: 44 QAEWILRKAK 53


>sp|TTUA_METJA|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 AWVLRK 8
AWVL+K
Sbjct: 68 AWVLKK 73


>sp|KADA_THEVO|ADENYLATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PAWVLR 7
P WVLR
Sbjct: 95 PEWVLR 100


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AWVLRKP 9
AW++R+P
Sbjct: 319 AWLVREP 325


>sp|MFNA_PYRHO|L-ASPARTATE/L-GLUTAMATE decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 AWVLRKP 9
AW++R+P
Sbjct: 319 AWLVREP 325


>sp|MFNA_PYRAB|PROBABLE L-aspartate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 3 AWVLRKP 9
AW++R+P
Sbjct: 320 AWLVREP 326


>sp|RS13_THEKO|SMALL ribosomal subunit protein uS13|Thermococcus kodakarensis (strain

Query: 2 PAWVLRKPR 10
PAW + +P+
Sbjct: 76 PAWAVNRPK 84




400|Sequence|1996|2005|LRKPREFLIA

>sp|FER5_METJA|UNCHARACTERIZED ferredoxin MJ0251|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LRKPREFLI 9
L+K REFLI
Sbjct: 11 LKKIREFLI 19


>sp|NEP1_THEAC|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma acidophilum

Query: 1 LRKPREFL 8
+RKP EF+
Sbjct: 160 MRKPSEFI 167


>sp|THYX_PYRAE|FLAVIN-DEPENDENT thymidylate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LRKPREFLIA 10
L PR FLIA
Sbjct: 4 LETPRVFLIA 13




401|Sequence|2001|2010|EFLIALLEKL

>sp|COBQ_METB6|PROBABLE cobyric acid synthase|Methanoregula boonei (strain DSM 21154

Query: 1 EFLIALLEK 9
E ++ALLEK
Sbjct: 472 EAIVALLEK 480




402|Sequence|2006|2015|LLEKLTELLE

>sp|UBIX_ARCFU|FLAVIN prenyltransferase UbiX|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLEKLTEL 8
L+EKLTEL
Sbjct: 19 LIEKLTEL 26


>sp|ACDD_METTH|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanothermobacter

Query: 1 LLEKLTELLE 10
L++KLTELL+
Sbjct: 2 LMDKLTELLK 11


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LLEKLTELLE 10
+LEK+ ELL+
Sbjct: 404 ILEKVAELLK 413


>sp|AGOG_METMP|N-GLYCOSYLASE/DNA lyase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LEKLTELLE 10
LEK+ ELLE
Sbjct: 4 LEKINELLE 12


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 LLEKLTELLE 10
LL++LTELL+
Sbjct: 278 LLKRLTELLQ 287


>sp|GGGPS_ARCFU|GERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LEKLTELLE 10
L+K TE++E
Sbjct: 107 LQKFTEIIE 115


>sp|METK_METKA|S-ADENOSYLMETHIONINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 LLEKLTELLE 10
LLE +TEL E
Sbjct: 378 LLENITELTE 387




403|Sequence|2011|2020|TELLEKNNPH

>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ELLEKNNPH 10
ELLE+ PH
Sbjct: 167 ELLEELRPH 175


>sp|TRUA_METTP|TRNA pseudouridine synthase A|Methanothrix thermoacetophila (strain DSM

Query: 2 ELLEKNNPH 10
ELL+ + PH
Sbjct: 198 ELLDPSTPH 206


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 3 LLEKNNPH 10
L EKNNP+
Sbjct: 296 LAEKNNPN 303


>sp|TMG10_METJA|TRNA (guanine(10)-N2)-dimethyltransferase|Methanocaldococcus jannaschii

Query: 2 ELLEKNNPH 10
E +KN PH
Sbjct: 171 EYFQKNRPH 179


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ELLEKNNP 9
+++EKNNP
Sbjct: 346 DVVEKNNP 353


>sp|Y1221_METJA|UNCHARACTERIZED protein MJ1221|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELLEKNNPH 10
E+L+KNN +
Sbjct: 24 EILKKNNAY 32


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 3 LLEKNNPH 10
L++KN PH
Sbjct: 79 LVKKNRPH 86


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ELLEKNNPH 10
+L+EK+NP
Sbjct: 343 DLVEKSNPQ 351


>sp|RRP4_METST|EXOSOME complex component Rrp4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TELLEKNNP 9
TEL +KN P
Sbjct: 93 TELYDKNEP 101


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ELLEKNNP 9
E LEKN P
Sbjct: 350 EYLEKNEP 357


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ELLEKNNP 9
+L+EK NP
Sbjct: 345 DLVEKTNP 352




404|Sequence|2016|2025|KNNPHGETLE

>sp|TRUA_NATPD|TRNA pseudouridine synthase A|Natronomonas pharaonis (strain ATCC

Query: 1 KNNPHGETLE 10
+ PHGET+E
Sbjct: 17 QRQPHGETVE 26


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KNNPHGETLE 10
KN P+G+T+E
Sbjct: 246 KNFPNGKTIE 255


>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KNNPHGETLE 10
KN P+G+T+E
Sbjct: 246 KNFPNGKTIE 255


>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 4 PHGETLE 10
PHG+T+E
Sbjct: 249 PHGKTIE 255


>sp|COAD_ARCFU|PHOSPHOPANTETHEINE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NPHGETLE 10
NP+G+TL+
Sbjct: 77 NPYGKTLD 84


>sp|DUT_AERPE|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Aeropyrum pernix

Query: 3 NPHGETLE 10
NPHG LE
Sbjct: 122 NPHGLRLE 129


>sp|TRUA_METM6|TRNA pseudouridine synthase A|Methanococcus maripaludis (strain C6 /

Query: 1 KNNPHGETL 9
+ PHGET+
Sbjct: 15 QTQPHGETV 23


>sp|TRUA_METMP|TRNA pseudouridine synthase A|Methanococcus maripaludis (strain DSM

Query: 1 KNNPHGETL 9
+ PHGET+
Sbjct: 15 QTQPHGETV 23


>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KNNPHGETLE 10
+N P+G+T+E
Sbjct: 246 RNFPNGKTIE 255


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NNPHGETLE 10
N+PHG T++
Sbjct: 481 NDPHGFTIK 489


>sp|Y642_METJA|UNCHARACTERIZED protein MJ0642|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNNPH 5
KNNPH
Sbjct: 272 KNNPH 276


>sp|AAT_PYRHO|ASPARTATE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NNPHGETLE 10
NNP G TL+
Sbjct: 175 NNPTGATLD 183


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 KNNPHGETL 9
KN+ HG TL
Sbjct: 124 KNSFHGRTL 132


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 NNPHGETL 9
NNP G TL
Sbjct: 186 NNPTGTTL 193


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 NNPHGETLE 10
NNP G +L+
Sbjct: 610 NNPFGSSLD 618


>sp|RL18_METTH|LARGE ribosomal subunit protein uL18|Methanothermobacter

Query: 2 NNPHGETL 9
N PHGE++
Sbjct: 129 NVPHGESV 136


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 NNPHGETL 9
NNP G TL
Sbjct: 187 NNPTGTTL 194


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 3 NPHGETLE 10
NP GE +E
Sbjct: 338 NPEGELIE 345


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NNPHGETL 9
NNP G TL
Sbjct: 187 NNPTGTTL 194


>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 1 KNNPHGETLE 10
K NP GE E
Sbjct: 158 KQNPSGEARE 167


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 3 NPHGETLE 10
NP GE LE
Sbjct: 457 NPPGEALE 464


>sp|TRPD_PYRAB|ANTHRANILATE phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 NPHGETL 9
NP GET+
Sbjct: 218 NPRGETI 224




405|Sequence|2021|2030|GETLETLTMA

>sp|DCDB_METLZ|DCTP deaminase, dUMP-forming|Methanocorpusculum labreanum (strain ATCC

Query: 1 GETLETLTM 9
ETLET+T+
Sbjct: 80 AETLETVTL 88




406|Sequence|2026|2035|TLTMATVCLF

***** No hits found ******


407|Sequence|2031|2040|TVCLFSAQPQ

>sp|RFRNP_METMA|RNA-FREE ribonuclease P|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TVCLFSAQPQ 10
T CLF PQ
Sbjct: 125 TECLFMENPQ 134


>sp|RFRNP_METBF|RNA-FREE ribonuclease P|Methanosarcina barkeri (strain Fusaro /

Query: 1 TVCLFSAQPQ 10
T CLF PQ
Sbjct: 125 TECLFMENPQ 134


>sp|RFRNP_METAC|RNA-FREE ribonuclease P|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TVCLFSAQPQ 10
T CLF PQ
Sbjct: 125 TECLFMENPQ 134




408|Sequence|2036|2045|SAQPQLADQV

>sp|OFOA2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 1 SAQPQLADQV 10
S +P++A+QV
Sbjct: 105 SMEPEMAEQV 114


>sp|Y793_METM6|DNA-BINDING protein MmarC6_0793|Methanococcus maripaludis (strain C6 /

Query: 2 AQPQLADQV 10
A+PQ A+QV
Sbjct: 65 AKPQFAEQV 73


>sp|Y1157_METM7|DNA-BINDING protein MmarC7_1157|Methanococcus maripaludis (strain C7 /

Query: 2 AQPQLADQV 10
A+PQ A+QV
Sbjct: 66 AKPQFAEQV 74




409|Sequence|2041|2050|LADQVPPLGH

>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 1 LADQVPPLGH 10
+ D +PPLGH
Sbjct: 290 IMDSLPPLGH 299


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LADQVPPLGH 10
+ D +PPLGH
Sbjct: 290 IMDSLPPLGH 299


>sp|HDRC_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 3 DQVPPLGH 10
D+VPP H
Sbjct: 152 DEVPPTTH 159


>sp|BRIX_METAC|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 3 DQVPPL 8
DQ+PPL
Sbjct: 121 DQLPPL 126


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 PPLGH 10
PPLGH
Sbjct: 339 PPLGH 343


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 VPPLGH 10
VPPLG+
Sbjct: 600 VPPLGY 605


>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LADQVPPLGH 10
L D++ P GH
Sbjct: 136 LIDEITPEGH 145


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 6 PPLGH 10
PP+GH
Sbjct: 220 PPIGH 224


>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LADQVPPLGH 10
LADQ+ GH
Sbjct: 281 LADQLSARGH 290


>sp|GATA_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Natronomonas pharaonis (strain ATCC

Query: 1 LADQVPP 7
LAD VPP
Sbjct: 45 LADYVPP 51




410|Sequence|2046|2055|PPLGHLPKVI

>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPLGHL 6
PPLGHL
Sbjct: 339 PPLGHL 344


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PPLGHLPKV 9
PPL LPK+
Sbjct: 1579 PPLRELPKL 1587


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 3 LGHLPKVI 10
+GHLP+V+
Sbjct: 236 VGHLPRVV 243


>sp|RADB_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 1 PPLGHLPKVI 10
P L HL KVI
Sbjct: 175 PSLEHLSKVI 184


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 1 PPLGH 5
PPLGH
Sbjct: 295 PPLGH 299


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 2 PLGHLPKVI 10
PLG PK I
Sbjct: 12 PLGDQPKAI 20


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PLGHLPKVI 10
PLG PK I
Sbjct: 12 PLGDQPKAI 20


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PLGHLPKVI 10
PLG PK I
Sbjct: 12 PLGDQPKAI 20


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PPLGH 5
PPLGH
Sbjct: 295 PPLGH 299


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 1 PPLGHL 6
PP+GH+
Sbjct: 220 PPIGHI 225


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 GHLPK 8
GHLPK
Sbjct: 115 GHLPK 119


>sp|TRPG2_HALMA|ANTHRANILATE synthase component II|Haloarcula marismortui (strain ATCC 43049

Query: 2 PLGHLPKVI 10
P+GH P V+
Sbjct: 89 PVGHAPSVV 97


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 2 PLGHLPK 8
P+G++PK
Sbjct: 535 PVGYIPK 541


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PLGHLPK 8
P+G++PK
Sbjct: 534 PIGYIPK 540


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 2 PLGHLPK 8
P+G++PK
Sbjct: 531 PIGYIPK 537


>sp|RL10_METKA|LARGE ribosomal subunit protein uL10|Methanopyrus kandleri (strain AV19

Query: 1 PPLGHLPKV 9
PP G+ PKV
Sbjct: 9 PPSGYEPKV 17


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPLGHLPKVI 10
PP H+ K++
Sbjct: 84 PPNSHIEKIV 93




411|Sequence|2051|2060|LPKVIQAMNH

>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPKVIQAMN 9
+PKV++A+N
Sbjct: 888 VPKVVEALN 896


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 2 PKVIQAMNH 10
PK++ A NH
Sbjct: 201 PKMVSAANH 209


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 PKVIQAMNH 10
PK++Q NH
Sbjct: 204 PKMVQVGNH 212


>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LPKVIQAMN 9
+PK IQA N
Sbjct: 288 IPKTIQAEN 296


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LPKVIQAMN 9
+PKV+ A+N
Sbjct: 883 VPKVVAAIN 891




412|Sequence|2056|2065|QAMNHRNNAI

>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 MNHRNNA 9
MNH+N A
Sbjct: 123 MNHKNKA 129


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AMNHRNNA 9
A NHRN A
Sbjct: 53 ARNHRNEA 60


>sp|DPCKG_PICTO|GTP-DEPENDENT dephospho-CoA kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 QAMNHRNNAI 10
+ NHR N+I
Sbjct: 71 KTYNHRENSI 80




413|Sequence|2061|2070|RNNAIPKSAI

>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 2 NNAIPKSAI 10
NNA PKS +
Sbjct: 694 NNATPKSLV 702


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 2 NNAIPKSAI 10
NNA PKS +
Sbjct: 705 NNASPKSLV 713


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 2 NNAIPKSAI 10
NNA PKS +
Sbjct: 705 NNASPKSLV 713




414|Sequence|2066|2075|PKSAIRVIHA

>sp|FEN_NATPD|FLAP endonuclease 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PKSAIRVIH 9
PK+A+++IH
Sbjct: 237 PKTAVKLIH 245


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 2 KSAIRVIHA 10
KSAIRV++A
Sbjct: 282 KSAIRVLNA 290


>sp|FEN_CENSY|FLAP endonuclease 1|Cenarchaeum symbiosum (strain A)

Query: 1 PKSAIRVIH 9
PK+A++++H
Sbjct: 247 PKTALKLVH 255


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 1 PKSAIRVIH 9
P+ AIR IH
Sbjct: 73 PEKAIRKIH 81


>sp|Y1110_METTH|UNCHARACTERIZED protein MTH_1110|Methanothermobacter thermautotrophicus (strain

Query: 1 PKSAIRVIH 9
P+SAI +IH
Sbjct: 94 PESAISLIH 102


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 1 PKSAIRVIH 9
P+S+I VIH
Sbjct: 158 PQSSIVVIH 166


>sp|ALF1_THEKO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KSAIRVIH 9
K+ IRVIH
Sbjct: 259 KALIRVIH 266




415|Sequence|2071|2080|RVIHALSENE

>sp|LIVM_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 1 RVIHALSENE 10
RV+ A+ ENE
Sbjct: 193 RVLRAMRENE 202


>sp|Y763_METJA|UNCHARACTERIZED protein MJ0763|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VIHALSENE 10
VIHALS++E
Sbjct: 101 VIHALSDDE 109


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 1 RVIHALSENE 10
RV+ ALSE E
Sbjct: 213 RVLSALSEEE 222


>sp|Y2122_ARCFU|UNCHARACTERIZED protein AF_2122|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VIHALSEN 9
V+H LSEN
Sbjct: 78 VLHTLSEN 85


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 3 IHALSENE 10
+HAL+EN+
Sbjct: 181 VHALAENK 188


>sp|Y550_METVS|UPF0280 protein Mevan_0550|Methanococcus vannielii (strain ATCC 35089

Query: 2 VIHALSEN 9
VIH+L EN
Sbjct: 92 VIHSLLEN 99




416|Sequence|2076|2085|LSENELCVRA

>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SENELCVR 9
+ENE C+R
Sbjct: 388 TENEKCIR 395


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 2 SENELCVR 9
SENE+C++
Sbjct: 589 SENEICLK 596


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NELCVRA 10
NELC RA
Sbjct: 189 NELCKRA 195


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ENELCVR 9
ENE+C++
Sbjct: 591 ENEICLK 597




417|Sequence|2081|2090|LCVRAMASLE

>sp|NADE_ARCFU|NH(3)-DEPENDENT NAD(+) synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LCVRAMAS 8
LCVRA+ S
Sbjct: 42 LCVRALGS 49


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 VRAMASLE 10
V+AMASLE
Sbjct: 66 VKAMASLE 73


>sp|MPTA_METMA|GTP cyclohydrolase MptA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CVRAMA 7
CVRAMA
Sbjct: 265 CVRAMA 270


>sp|MPTA_METAC|GTP cyclohydrolase MptA|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CVRAMA 7
CVRAMA
Sbjct: 265 CVRAMA 270




418|Sequence|2086|2095|MASLETIGPL

>sp|GATA_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Natronomonas pharaonis (strain ATCC

Query: 3 SLETIGPL 10
SLE IGPL
Sbjct: 158 SLEQIGPL 165


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 3 SLETIGPL 10
SLE IGP+
Sbjct: 196 SLEQIGPM 203


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 3 SLETIGPL 10
SLE +GPL
Sbjct: 200 SLEQVGPL 207


>sp|GATA_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 3 SLETIGPL 10
SLE IGP+
Sbjct: 199 SLEQIGPM 206


>sp|GATA_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfurisphaera tokodaii (strain DSM

Query: 3 SLETIGPL 10
SLE IGP+
Sbjct: 199 SLEQIGPM 206


>sp|GATA_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 3 SLETIGPL 10
SLE IGP+
Sbjct: 202 SLEQIGPM 209


>sp|GATA_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 3 SLETIGPL 10
SLE IGP+
Sbjct: 167 SLEQIGPM 174


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 3 SLETIGPL 10
SLE +GPL
Sbjct: 199 SLEQVGPL 206


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 3 SLETIGPL 10
SLE +GPL
Sbjct: 200 SLEQVGPL 207


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 3 SLETIGPL 10
SLE IGP+
Sbjct: 199 SLEQIGPM 206


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 3 SLETIGPL 10
SLE IGP+
Sbjct: 159 SLEQIGPI 166


>sp|NTPTH_METTH|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 MASLETIGP 9
+AS+ET GP
Sbjct: 61 LASVETEGP 69


>sp|LADH_METMP|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 MASLETIGPL 10
++ +ET GP+
Sbjct: 363 LSKIETFGPI 372


>sp|GATA_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Halobacterium salinarum (strain ATCC

Query: 3 SLETIGPL 10
SLE IGP+
Sbjct: 158 SLEQIGPI 165




419|Sequence|2091|2100|TIGPLMNGMK

>sp|Y1521_ARCFU|ADP-RIBOSE glycohydrolase AF_1521|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TIGPLMNGM 9
T+GP+ +GM
Sbjct: 99 TVGPICSGM 107


>sp|MOAA_PYRAB|PROBABLE GTP 3',8-cyclase|Pyrococcus abyssi (strain GE5 /

Query: 2 IGPLMNG 8
+GPL NG
Sbjct: 278 LGPLRNG 284


>sp|MOAA_PYRHO|PROBABLE GTP 3',8-cyclase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IGPLMNG 8
+GPL NG
Sbjct: 278 LGPLRNG 284




420|Sequence|2096|2105|MNGMKKRADT

***** No hits found ******


421|Sequence|2101|2110|KRADTVGLAC

>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 ADTVGLA 9
ADTVGLA
Sbjct: 430 ADTVGLA 436


>sp|DHYS_HALSA|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 ADTVGLAC 10
ADT GL C
Sbjct: 242 ADTTGLIC 249


>sp|DHYS_HALS3|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 ADTVGLAC 10
ADT GL C
Sbjct: 242 ADTTGLIC 249


>sp|RTCA_SULAC|RNA 3'-terminal phosphate cyclase|Sulfolobus acidocaldarius (strain

Query: 1 KRADTVG 7
KRA+TVG
Sbjct: 256 KRAETVG 262


>sp|TPIS_METBR|TRIOSEPHOSPHATE isomerase|Methanobacterium bryantii

Query: 1 KRADTVGLA 9
K+AD++GL+
Sbjct: 112 KKADSLGLS 120


>sp|MTSA_METBA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina barkeri

Query: 3 ADTVGLAC 10
AD VG AC
Sbjct: 306 ADIVGTAC 313


>sp|NRPR1_METMA|GLOBAL nitrogen regulator NrpRI|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KRADTVGLA 9
K+A+ VGLA
Sbjct: 255 KKAEKVGLA 263




422|Sequence|2106|2115|VGLACEAINR

>sp|COFC_METB6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 2 GLACEAIN 9
GL+CE I+
Sbjct: 152 GLSCEVID 159


>sp|NADE_METKA|NH(3)-DEPENDENT NAD(+) synthetase|Methanopyrus kandleri (strain AV19 /

Query: 1 VGLACEAINR 10
+GLA EA+ R
Sbjct: 52 LGLAVEALGR 61


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VGLACEA 7
VG+ CEA
Sbjct: 259 VGMVCEA 265


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VGLACEA 7
VG+ CEA
Sbjct: 260 VGMVCEA 266


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VGLACEA 7
VG+ CEA
Sbjct: 260 VGMVCEA 266


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGLACEAIN 9
+G+ CE +N
Sbjct: 117 IGIICELMN 125


>sp|Y1437_METM6|UPF0280 protein MmarC6_1437|Methanococcus maripaludis (strain C6 /

Query: 1 VGLACEAIN 9
VG+A +AIN
Sbjct: 191 VGIAVDAIN 199




423|Sequence|2111|2120|EAINRMFQKE

>sp|PYRH_THEPD|URIDYLATE kinase|Thermofilum pendens (strain DSM 2475

Query: 1 EAINRMFQKE 10
E + RMFQ+E
Sbjct: 172 EELRRMFQRE 181


>sp|RL40_META3|LARGE ribosomal subunit protein eL40|Methanococcus aeolicus (strain

Query: 1 EAINRMFQKE 10
EA+NR+F K+
Sbjct: 5 EAMNRVFHKK 14


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EAINRMFQ 8
EA+NR+ Q
Sbjct: 213 EAVNRLLQ 220


>sp|Y835_METJA|UNCHARACTERIZED protein MJ0835|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EAINRMFQK 9
E+IN+MF K
Sbjct: 66 ESINQMFAK 74


>sp|RL10E_METMJ|LARGE ribosomal subunit protein uL16|Methanoculleus marisnigri (strain

Query: 2 AINRMFQKE 10
INR QKE
Sbjct: 68 GINRQLQKE 76


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 EAINRMFQKE 10
EA+ R+ +KE
Sbjct: 72 EAVERIIEKE 81


>sp|RL40_METMP|LARGE ribosomal subunit protein eL40|Methanococcus maripaludis (strain

Query: 1 EAINRMFQKE 10
EAI R+F K+
Sbjct: 5 EAIKRVFMKK 14


>sp|RL40_METM7|LARGE ribosomal subunit protein eL40|Methanococcus maripaludis (strain

Query: 1 EAINRMFQKE 10
EAI R+F K+
Sbjct: 5 EAIKRVFMKK 14


>sp|RL40_METM6|LARGE ribosomal subunit protein eL40|Methanococcus maripaludis (strain

Query: 1 EAINRMFQKE 10
EAI R+F K+
Sbjct: 5 EAIKRVFMKK 14


>sp|RL40_METM5|LARGE ribosomal subunit protein eL40|Methanococcus maripaludis (strain

Query: 1 EAINRMFQKE 10
EAI R+F K+
Sbjct: 5 EAIKRVFMKK 14




424|Sequence|2116|2125|MFQKEQSELV

***** No hits found ******


425|Sequence|2121|2130|QSELVAQALK

>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 2 SELVAQALK 10
SE++++ALK
Sbjct: 420 SEMISEALK 428




426|Sequence|2126|2135|AQALKADLVP

>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 2 QALKADLVP 10
QA+K DL+P
Sbjct: 42 QAIKDDLIP 50


>sp|Y1464_METJA|UNCHARACTERIZED GTP-binding protein MJ1464|Methanocaldococcus jannaschii (strain

Query: 5 KADLVP 10
KADLVP
Sbjct: 61 KADLVP 66




427|Sequence|2131|2140|ADLVPYLLKL

>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 ADLVPYLLKL 10
ADL PYL+++
Sbjct: 84 ADLNPYLMEM 93


>sp|SYH_THEVO|HISTIDINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ADLVPYLLK 9
DLVP+L K
Sbjct: 414 GDLVPFLEK 422


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DLVPYLLKL 10
DL+P LLKL
Sbjct: 85 DLIPGLLKL 93


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 ADLVPYLLKL 10
AD++ Y+LKL
Sbjct: 165 ADMLEYVLKL 174


>sp|FLAH_SULAC|ARCHAEAL flagellar ATP-binding protein FlaH|Sulfolobus acidocaldarius

Query: 2 DLVPYLLK 9
DL+PY ++
Sbjct: 73 DLIPYFIR 80


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLVPYL 7
D+VPYL
Sbjct: 161 DIVPYL 166


>sp|Y3504_METJA|UNCHARACTERIZED protein MJECL04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ADLVPYLLKL 10
+DL PYL L
Sbjct: 256 SDLTPYLKNL 265


>sp|Y078_METJA|UNCHARACTERIZED protein MJ0078|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VPYLLKL 10
+PYL+KL
Sbjct: 95 IPYLIKL 101




428|Sequence|2136|2145|YLLKLLEGIG

>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YLLKLLEG 8
YLL+LLEG
Sbjct: 116 YLLRLLEG 123


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 YLLKLLEGIG 10
+LL+ LEG+G
Sbjct: 203 FLLEYLEGLG 212


>sp|RL22_STAMF|LARGE ribosomal subunit protein uL22|Staphylothermus marinus (strain ATCC

Query: 1 YLLKLLEGI 9
YLL+LLE +
Sbjct: 93 YLLRLLEHV 101


>sp|ARTD_METJA|PROBABLE archaeosortase D|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLLKLLEG 8
Y+LK+LEG
Sbjct: 21 YILKMLEG 28


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 2 LLKLLEGI 9
+LK+LEGI
Sbjct: 507 VLKILEGI 514


>sp|IXTPA_IGNH4|DITP/XTP pyrophosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LLKLLEGI 9
LLKL+EG+
Sbjct: 97 LLKLMEGV 104


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 2 LLKLLEGI 9
+LKLLEG+
Sbjct: 60 VLKLLEGL 67


>sp|IXTPA_SACS2|DITP/XTP pyrophosphatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LLKLLEGI 9
+LKLLEGI
Sbjct: 98 ILKLLEGI 105


>sp|RL22_AERPE|LARGE ribosomal subunit protein uL22|Aeropyrum pernix (strain ATCC 700893

Query: 1 YLLKLLEGI 9
Y+LKLL+ +
Sbjct: 93 YMLKLLDNV 101


>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YLLKLLEGI 9
YLL+ EGI
Sbjct: 115 YLLRCAEGI 123


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 YLLKLLEGI 9
+ LKLLEGI
Sbjct: 516 HYLKLLEGI 524


>sp|IXTPA_PYRFU|DITP/XTP pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LLKLLEGI 9
+LKL+EGI
Sbjct: 93 ILKLMEGI 100




429|Sequence|2141|2150|LEGIGLENLD

>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 LEGIGLENLD 10
LEG+G ENLD
Sbjct: 236 LEGMGCENLD 245


>sp|Y1268_ARCFU|UNCHARACTERIZED protein AF_1268|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEGIGLENLD 10
L+GIG+EN D
Sbjct: 65 LDGIGMENPD 74


>sp|ARCH_AERPE|PROTEIN archease|Aeropyrum pernix (strain ATCC 700893

Query: 1 LEGIGLENL 9
+EGI LENL
Sbjct: 55 IEGIDLENL 63


>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 1 LEGIGLEN 8
LEGIGLE+
Sbjct: 293 LEGIGLES 300


>sp|Y676_METJA|PUTATIVE hydrogenase expression/formation protein

Query: 3 GIGLENLD 10
GIGLE+LD
Sbjct: 34 GIGLESLD 41


>sp|G3P_PICTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 2 EGIGLENL 9
EG+G+EN+
Sbjct: 87 EGMGMENI 94


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 1 LEGIGLENLD 10
LEG+ +NLD
Sbjct: 181 LEGMKFQNLD 190


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 LEGIGLENLD 10
LE IG++N+D
Sbjct: 19 LEKIGVKNID 28


>sp|ARLY_METST|ARGININOSUCCINATE lyase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EGIGLENLD 10
EGIG NLD
Sbjct: 68 EGIGALNLD 76


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LEGIGLE 7
LEGIG+E
Sbjct: 333 LEGIGVE 339


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 EGIGLENLD 10
+GIG+ +LD
Sbjct: 398 QGIGIPDLD 406


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 EGIGLENLD 10
EGIG +NL+
Sbjct: 88 EGIGAKNLE 96


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 1 LEGIGLENLD 10
L+GIG+ N D
Sbjct: 290 LDGIGIVNRD 299


>sp|Y2167_ARCFU|UNCHARACTERIZED protein AF_2167|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEGIGLEN 8
L G+GLEN
Sbjct: 96 LGGMGLEN 103


>sp|G3P_METFE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermus fervidus

Query: 2 EGIGLENL 9
EGIG +NL
Sbjct: 88 EGIGAKNL 95


>sp|FEN_PICTO|FLAP endonuclease 1|Picrophilus torridus (strain ATCC 700027

Query: 1 LEGIGLENLD 10
++ IG++NLD
Sbjct: 265 IKNIGIDNLD 274


>sp|TBP1_METMA|TATA-BOX-BINDING protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GIGLENLD 10
G+GLEN++
Sbjct: 120 GLGLENIE 127


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EGIGLENL 9
EG+G+E++
Sbjct: 257 EGVGIESM 264


>sp|TBP2_METMA|TATA-BOX-BINDING protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GIGLENLD 10
G+GLEN++
Sbjct: 120 GLGLENIE 127


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain

Query: 1 LEGIGLENL 9
LEGIG+ +L
Sbjct: 50 LEGIGVASL 58


>sp|TBP1_METAC|TATA-BOX-BINDING protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GIGLENLD 10
G+GLEN++
Sbjct: 120 GLGLENIE 127


>sp|TBP_ARCFU|TATA-BOX-BINDING protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GIGLENLD 10
G+GLEN++
Sbjct: 120 GLGLENIE 127


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 1 LEGIGLENL 9
+EG LENL
Sbjct: 138 IEGTSLENL 146


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 4 IGLENLD 10
+GLENL+
Sbjct: 1052 VGLENLE 1058


>sp|HEM1_METTP|GLUTAMYL-TRNA reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LEGIGLENLD 10
+EG+ L N+D
Sbjct: 282 IEGVELHNID 291


>sp|TBP_METTP|TATA-BOX-BINDING protein|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GIGLENLD 10
G+GLEN++
Sbjct: 120 GLGLENIE 127




430|Sequence|2146|2155|LENLDSPAAT

***** No hits found ******


431|Sequence|2151|2160|SPAATKAQIV

>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 1 SPAATKAQI 9
+PA TK+QI
Sbjct: 211 APALTKSQI 219


>sp|SUCC_HALLT|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halorubrum lacusprofundi

Query: 2 PAATKAQI 9
PAA KAQ+
Sbjct: 41 PAAIKAQV 48


>sp|TRPD_METBF|ANTHRANILATE phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SPAATKAQIV 10
+PA TK Q++
Sbjct: 182 NPAGTKGQVI 191




432|Sequence|2156|2165|KAQIVKALKA

>sp|TRMY_THEGJ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 4 IVKALKA 10
IVKALKA
Sbjct: 88 IVKALKA 94


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 IVKALKA 10
IVKALKA
Sbjct: 805 IVKALKA 811


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 2 AQIVKALKA 10
A+ VKALKA
Sbjct: 218 AKTVKALKA 226




433|Sequence|2161|2170|KALKAMTRSL

>sp|HEM1_METS5|GLUTAMYL-TRNA reductase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KALKAMTRSL 10
+ L+AMTRS+
Sbjct: 354 EVLEAMTRSM 363




434|Sequence|2166|2175|MTRSLQYGEQ

>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 3 RSLQYGEQ 10
R+++YGE+
Sbjct: 59 RAIEYGEE 66


>sp|THIM_PYRHO|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 SLQYGEQ 10
SL+YGE+
Sbjct: 139 SLEYGEE 145




435|Sequence|2171|2180|QYGEQVNEIL

>sp|TRM56_META3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus aeolicus

Query: 2 YGEQVNEIL 10
YGE +NEI+
Sbjct: 86 YGENINEIM 94


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 YGEQVNEIL 10
YGE+V+E+L
Sbjct: 294 YGEEVDELL 302


>sp|RL30_METMJ|LARGE ribosomal subunit protein uL30|Methanoculleus marisnigri (strain

Query: 2 YGEQVNEIL 10
YG Q+N++L
Sbjct: 141 YGPQINDLL 149


>sp|RFHPS_METTH|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanothermobacter thermautotrophicus

Query: 2 YGEQVNEI 9
+GE VNEI
Sbjct: 243 FGESVNEI 250


>sp|TRM56_METM6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 2 YGEQVNEIL 10
YGE +N+I+
Sbjct: 85 YGENINKIM 93


>sp|CSG_HALVD|CELL surface glycoprotein|Haloferax volcanii (strain ATCC 29605

Query: 3 GEQVNEIL 10
GEQ+NE++
Sbjct: 624 GEQINELI 631


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 YGEQVNEI 9
+GE VNEI
Sbjct: 170 FGEPVNEI 177


>sp|TRM56_METM7|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 2 YGEQVNEIL 10
YGE +N+I+
Sbjct: 85 YGENINKIM 93


>sp|TRM56_METM5|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 2 YGEQVNEIL 10
YGE +N+I+
Sbjct: 85 YGENINKIM 93


>sp|TRM56_METMP|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 2 YGEQVNEIL 10
YGE +N+I+
Sbjct: 85 YGENINKIM 93


>sp|Y835_METJA|UNCHARACTERIZED protein MJ0835|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QYGEQVNEI 9
+YG+++NEI
Sbjct: 326 EYGKKLNEI 334


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 1 QYGEQVNEIL 10
+YGE V+E+L
Sbjct: 601 EYGEVVSEVL 610


>sp|RL30_METJA|LARGE ribosomal subunit protein uL30|Methanocaldococcus jannaschii

Query: 3 GEQVNEIL 10
GE++NE+L
Sbjct: 143 GEKINELL 150


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YGEQVNEI 9
YGE++N+I
Sbjct: 14 YGEELNKI 21


>sp|RL30_METLZ|LARGE ribosomal subunit protein uL30|Methanocorpusculum labreanum (strain

Query: 2 YGEQVNEIL 10
YG ++N++L
Sbjct: 141 YGTEINDLL 149


>sp|TRM56_METJA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocaldococcus

Query: 2 YGEQVNEIL 10
YG +NEI+
Sbjct: 85 YGANINEIM 93


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GEQVNEI 9
GE++NEI
Sbjct: 189 GEEINEI 195


>sp|RL30_PYRFU|LARGE ribosomal subunit protein uL30|Pyrococcus furiosus (strain ATCC

Query: 3 GEQVNEIL 10
GE++NE++
Sbjct: 144 GEKINELI 151


>sp|RL30_THEKO|LARGE ribosomal subunit protein uL30|Thermococcus kodakarensis (strain

Query: 3 GEQVNEIL 10
GE++NE++
Sbjct: 144 GEKINELI 151


>sp|RL30_SULTO|LARGE ribosomal subunit protein uL30|Sulfurisphaera tokodaii (strain DSM

Query: 3 GEQVNEIL 10
GE++NE++
Sbjct: 147 GEKINELI 154


>sp|RL30_PYRHO|LARGE ribosomal subunit protein uL30|Pyrococcus horikoshii (strain ATCC

Query: 3 GEQVNEIL 10
GE++NE++
Sbjct: 144 GEKINELI 151


>sp|TRUA_METMA|TRNA pseudouridine synthase A|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YGEQVNEI 9
YGE++N I
Sbjct: 228 YGEEINWI 235




436|Sequence|2176|2185|VNEILCRSSV

>sp|Y182_ARCFU|UNCHARACTERIZED protein AF_0182|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VNEILCRS 8
V E+LCRS
Sbjct: 71 VAEVLCRS 78




437|Sequence|2181|2190|CRSSVWSAFK

>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain

Query: 1 CRSSVWSAFK 10
CRS W A++
Sbjct: 19 CRSIDWDAWR 28


>sp|DAPAL_PYRHO|UNCHARACTERIZED DapA-like lyase PH0847|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 VWSAFK 10
VW+AFK
Sbjct: 216 VWNAFK 221


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 RSSVWSAFK 10
R VWS+F+
Sbjct: 18 RGFVWSSFE 26


>sp|ARLY_NITMS|ARGININOSUCCINATE lyase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 RSSVWSAFK 10
+SS+WS K
Sbjct: 319 KSSIWSTSK 327


>sp|LYSY_NATPD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 RSSVWSAFK 10
+ +WSAF+
Sbjct: 248 KGDLWSAFR 256


>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SSVWSAFK 10
S++W FK
Sbjct: 239 SAIWKGFK 246


>sp|DAPAL_PYRFU|UNCHARACTERIZED DapA-like lyase PF0657|Pyrococcus furiosus (strain ATCC 43587

Query: 5 VWSAFK 10
+W+AFK
Sbjct: 217 IWNAFK 222




438|Sequence|2186|2195|WSAFKDQKHD

>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 1 WSAFKDQKHD 10
W KD+ HD
Sbjct: 136 WEEVKDRLHD 145


>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii (strain

Query: 2 SAFKDQK 8
SAFK+QK
Sbjct: 194 SAFKNQK 200


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WSAFKDQ 7
W A KDQ
Sbjct: 405 WPAMKDQ 411


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WSAFKDQK 8
W+A++D K
Sbjct: 19 WAAYRDVK 26


>sp|DAPAL_PYRFU|UNCHARACTERIZED DapA-like lyase PF0657|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WSAFKDQ 7
W+AFK++
Sbjct: 218 WNAFKEK 224


>sp|DHYS_PYRAB|PROBABLE deoxyhypusine synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 FKDQKHD 10
FK+++HD
Sbjct: 224 FKEERHD 230




439|Sequence|2191|2200|DQKHDLFISE

>sp|RL1_PYRHO|LARGE ribosomal subunit protein uL1|Pyrococcus horikoshii (strain ATCC

Query: 2 QKHDLFISE 10
+K+D FI+E
Sbjct: 105 KKYDFFIAE 113


>sp|RL1_PYRFU|LARGE ribosomal subunit protein uL1|Pyrococcus furiosus (strain ATCC

Query: 2 QKHDLFISE 10
+K+D FI+E
Sbjct: 102 KKYDFFIAE 110


>sp|RL1_PYRAB|LARGE ribosomal subunit protein uL1|Pyrococcus abyssi (strain GE5 /

Query: 2 QKHDLFISE 10
+K+D FI+E
Sbjct: 105 KKYDFFIAE 113




440|Sequence|2196|2205|LFISESQTAG

>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LFISESQTAG 10
LFI E ++AG
Sbjct: 421 LFIVEGESAG 430




441|Sequence|2201|2210|SQTAGYLTGP

>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 SQTAGYLTG 9
+QT+GY+TG
Sbjct: 419 AQTSGYVTG 427


>sp|AROD_METTP|3-DEHYDROQUINATE dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 TAGYLTGP 10
T GY+TGP
Sbjct: 198 TYGYVTGP 205


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SQTAGYLTG 9
+QT GY+TG
Sbjct: 419 AQTGGYVTG 427


>sp|Y049_METTM|UNCHARACTERIZED protein MTBMA_c00490|Methanothermobacter marburgensis (strain

Query: 2 QTAGYLTGP 10
Q++GY GP
Sbjct: 18 QSSGYSCGP 26


>sp|MCH_METMJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SQTAGYLTG 9
S + GYLTG
Sbjct: 41 STSGGYLTG 49


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 SQTAGYLT 8
+QT+GY+T
Sbjct: 419 AQTSGYIT 426


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 3 TAGYLTG 9
T GYLTG
Sbjct: 281 TGGYLTG 287


>sp|RL18_METBF|LARGE ribosomal subunit protein uL18|Methanosarcina barkeri (strain

Query: 3 TAGYLTG 9
TA YLTG
Sbjct: 80 TAAYLTG 86


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 TAGYLTG 9
T+GY+TG
Sbjct: 421 TSGYVTG 427




442|Sequence|2206|2215|YLTGPGVAGY

>sp|BPSA_THEKO|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LTGPGVAGY 10
L GPG AGY
Sbjct: 244 LKGPGCAGY 252


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 2 LTGPGVAG 9
LTGP +AG
Sbjct: 601 LTGPNMAG 608


>sp|LEUC_SULAC|3-ISOPROPYLMALATE dehydratase large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 YLTGPGVAG 9
YL+GP VA
Sbjct: 392 YLSGPAVAA 400


>sp|AMPK_PYRFU|LYSYL aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LTGPGVAGY 10
+ PGV+GY
Sbjct: 11 IESPGVSGY 19


>sp|RL10_SACI6|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 YLTGPGV 7
YLTGP V
Sbjct: 85 YLTGPNV 91


>sp|RL10_SACI4|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 YLTGPGV 7
YLTGP V
Sbjct: 85 YLTGPNV 91


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 2 LTGPGVA 8
L GPGVA
Sbjct: 316 LVGPGVA 322


>sp|RL10_SACI7|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 YLTGPGV 7
YLTGP V
Sbjct: 85 YLTGPNV 91


>sp|RL10_SACI2|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 YLTGPGV 7
YLTGP V
Sbjct: 85 YLTGPNV 91


>sp|RL10_SACI1|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 YLTGPGV 7
YLTGP V
Sbjct: 85 YLTGPNV 91


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 YLTGPGVAG 9
YL+GP VA
Sbjct: 394 YLSGPAVAA 402


>sp|RL10_SACI3|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 YLTGPGV 7
YLTGP V
Sbjct: 85 YLTGPNV 91


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 YLTGPGVAG 9
YL+GP VA
Sbjct: 392 YLSGPSVAA 400


>sp|RL10_SACS2|LARGE ribosomal subunit protein uL10|Saccharolobus solfataricus (strain

Query: 1 YLTGPGV 7
YLTGP V
Sbjct: 85 YLTGPNV 91


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GPGVAGY 10
PGV+GY
Sbjct: 18 APGVSGY 24


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 2 LTGPGVA 8
L GPGVA
Sbjct: 306 LMGPGVA 312


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 LTGPGVA 8
L GPGVA
Sbjct: 321 LMGPGVA 327


>sp|Y749_METJA|UNCHARACTERIZED protein MJ0749|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLTGPGVAGY 10
YL+G ++GY
Sbjct: 135 YLSGVKISGY 144


>sp|RS2_HALWD|SMALL ribosomal subunit protein uS2|Haloquadratum walsbyi (strain DSM

Query: 2 LTGPGVAGY 10
LT P AGY
Sbjct: 186 LTNPDYAGY 194


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YLTGPGVAG 9
Y+ G G+AG
Sbjct: 3 YIIGSGIAG 11


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 2 LTGPGVAG 9
+TGP +AG
Sbjct: 624 ITGPNMAG 631


>sp|CSM3_METTH|CRISPR system Cms endoribonuclease Csm3|Methanothermobacter

Query: 1 YLTGPGVAGY 10
YL G G GY
Sbjct: 195 YLGGSGTRGY 204


>sp|CBSA_SULAC|CYTOCHROME b558/566 subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LTGPGVAGY 10
L+ PG AGY
Sbjct: 49 LSNPGSAGY 57


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 YLTGPGVAGY 10
YLT GV+ Y
Sbjct: 160 YLTKKGVSDY 169


>sp|CSM3_METJA|CRISPR system Cms endoribonuclease Csm3|Methanocaldococcus jannaschii

Query: 1 YLTGPGVAGY 10
YL G G GY
Sbjct: 188 YLGGSGSRGY 197


>sp|CBIM_HALS3|PUTATIVE cobalt transport protein CbiM|Halobacterium salinarum (strain ATCC

Query: 3 TGPGVAG 9
+GPGVAG
Sbjct: 165 SGPGVAG 171


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 2 LTGPGVAG 9
+TGP +AG
Sbjct: 635 VTGPNMAG 642


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 2 LTGPGVAG 9
+TGP +AG
Sbjct: 635 VTGPNMAG 642


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 2 LTGPGVAG 9
+TGP +AG
Sbjct: 635 VTGPNMAG 642


>sp|RS2_METTP|SMALL ribosomal subunit protein uS2|Methanothrix thermoacetophila (strain

Query: 2 LTGPGVAGY 10
LT P AGY
Sbjct: 111 LTNPHFAGY 119


>sp|IF6_METHJ|TRANSLATION initiation factor 6|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YLTGPGVAGY 10
YL G G +GY
Sbjct: 198 YLAGVGTSGY 207




443|Sequence|2211|2220|GVAGYLTAGT

>sp|Y1052_THEAC|UNCHARACTERIZED solute-binding protein Ta1052|Thermoplasma acidophilum (strain ATCC

Query: 1 GVAGYLTAGT 10
G+ GYLTAGT
Sbjct: 256 GLDGYLTAGT 265


>sp|DSRD_ARCFU|PROTEIN DsrD|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVAGYLTAGT 10
GVAGY ++G+
Sbjct: 48 GVAGYWSSGS 57


>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 3 AGYLTAG 9
AGYLT G
Sbjct: 85 AGYLTTG 91


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GVAGYLTAGT 10
G A Y+ AGT
Sbjct: 772 GTASYILAGT 781


>sp|MFNA_METBF|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina barkeri (strain

Query: 2 VAGYLTAG 9
V GYLT G
Sbjct: 93 VCGYLTTG 100


>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 2 VAGYLTAG 9
V GYLT G
Sbjct: 93 VCGYLTTG 100


>sp|RS17E_METM7|SMALL ribosomal subunit protein eS17|Methanococcus maripaludis (strain

Query: 2 VAGYLTA 8
VAGY+TA
Sbjct: 50 VAGYVTA 56


>sp|RS17E_METM5|SMALL ribosomal subunit protein eS17|Methanococcus maripaludis (strain

Query: 2 VAGYLTA 8
VAGY+TA
Sbjct: 50 VAGYVTA 56


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 GVAGYLTAGT 10
GV Y TAGT
Sbjct: 942 GVKLYATAGT 951


>sp|RNH2_HALSA|RIBONUCLEASE HII|Halobacterium salinarum (strain ATCC 700922

Query: 1 GVAGYLTAG 9
G+AGY+ AG
Sbjct: 94 GMAGYVDAG 102


>sp|RNH2_HALS3|RIBONUCLEASE HII|Halobacterium salinarum (strain ATCC 29341

Query: 1 GVAGYLTAG 9
G+AGY+ AG
Sbjct: 94 GMAGYVDAG 102


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVAGYLTAGT 10
G A Y+ AGT
Sbjct: 871 GTASYVLAGT 880


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 GVAGYLTA 8
GVAGY TA
Sbjct: 5032 GVAGYSTA 5039


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 GVAGYL 6
G+AGYL
Sbjct: 411 GIAGYL 416


>sp|RS17E_METVS|SMALL ribosomal subunit protein eS17|Methanococcus vannielii (strain

Query: 2 VAGYLTA 8
+AGY+TA
Sbjct: 50 IAGYITA 56


>sp|RS17E_METMP|SMALL ribosomal subunit protein eS17|Methanococcus maripaludis (strain

Query: 2 VAGYLTA 8
+AGY+TA
Sbjct: 50 IAGYVTA 56


>sp|RS17E_METM6|SMALL ribosomal subunit protein eS17|Methanococcus maripaludis (strain

Query: 2 VAGYLTA 8
+AGY+TA
Sbjct: 50 IAGYVTA 56


>sp|Y544_THEVO|UNCHARACTERIZED solute-binding protein TV0544|Thermoplasma volcanium (strain ATCC

Query: 1 GVAGYLTAG 9
G+ GYLT+G
Sbjct: 243 GLDGYLTSG 251


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 GVAGYLTAGT 10
G A Y+ AGT
Sbjct: 817 GTASYVLAGT 826


>sp|GGGPS_SULTO|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVAGYLTAGT 10
G +G+L GT
Sbjct: 41 GTSGFLIGGT 50




444|Sequence|2216|2225|LTAGTSTSVM

>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 LTAGTSTSVM 10
LTAG TSV+
Sbjct: 126 LTAGHPTSVI 135


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 LTAGTSTSV 9
LT GT+T+V
Sbjct: 358 LTVGTATTV 366




445|Sequence|2221|2230|STSVMSNLPP

>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TSVMSNLPP 10
T++MSN+PP
Sbjct: 180 TAIMSNVPP 188


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TSVMSNLPP 10
TSVM LPP
Sbjct: 380 TSVMQFLPP 388


>sp|HTAXP_HALS3|HEAT repeat-containing taxis protein OE_2401F|Halobacterium salinarum

Query: 4 VMSNLPP 10
++SN+PP
Sbjct: 246 ILSNVPP 252


>sp|AATC_PYRHO|A-TYPE ATP synthase subunit C|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 MSNLPP 10
+SNLPP
Sbjct: 138 LSNLPP 143


>sp|Y619_METBF|UPF0215 protein Mbar_A0619|Methanosarcina barkeri (strain Fusaro /

Query: 2 TSVMSNLP 9
TS+ SN+P
Sbjct: 165 TSIRSNIP 172


>sp|Y4269_METAC|UPF0215 protein MA_4269|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TSVMSNLP 9
TS+ SN+P
Sbjct: 167 TSIRSNIP 174




446|Sequence|2226|2235|SNLPPPVDHE

>sp|HTAXP_HALS3|HEAT repeat-containing taxis protein OE_2401F|Halobacterium salinarum

Query: 1 SNLPPPVDHE 10
SN+PP HE
Sbjct: 248 SNVPPDQSHE 257


>sp|COXX1_NATPD|PROTOHEME IX farnesyltransferase 1|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LPPPVDHE 10
L PPVD E
Sbjct: 149 LAPPVDEE 156


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 3 LPPPVDHE 10
LPPP+D +
Sbjct: 553 LPPPLDDD 560


>sp|Y1673_METJA|UNCHARACTERIZED protein MJ1673|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SNLPPPVD 8
SN+PP VD
Sbjct: 41 SNIPPDVD 48


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LPPPVD 8
LPPP D
Sbjct: 301 LPPPTD 306


>sp|CMR6_PYRFU|CRISPR system Cmr subunit Cmr6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NLPPPVD 8
N+PPP D
Sbjct: 273 NVPPPGD 279


>sp|CUTB_SULAC|GLYCERALDEHYDE dehydrogenase medium chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 SNLPPPVDH 9
S + PP DH
Sbjct: 250 SQINPPSDH 258


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 SNLPPPVDHE 10
S+LP PV+ E
Sbjct: 572 SSLPGPVEKE 581


>sp|Y737_ARCFU|UNCHARACTERIZED protein AF_0737|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NLPPPVD 8
N+P PVD
Sbjct: 44 NIPVPVD 50




447|Sequence|2231|2243|PVDHEAGDLGYQT

>sp|RL3_HALMA|LARGE ribosomal subunit protein uL3|Haloarcula marismortui (strain ATCC

Query: 4 HEAGDLG 10
HEAGDLG
Sbjct: 133 HEAGDLG 139


>sp|ASSY_NATPD|ARGININOSUCCINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VDHEAGDLGYQ 12
VDHE + GYQ
Sbjct: 298 VDHEWSEKGYQ 308


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PVDHEAGDLG 10
P++H+ DLG
Sbjct: 241 PIEHQLKDLG 250


>sp|RLME_METST|RIBOSOMAL RNA large subunit methyltransferase|Methanosphaera stadtmanae

Query: 1 PVDHEA 6
P+DHEA
Sbjct: 82 PIDHEA 87


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 PVDHEAGDLGY 11
PV+ + GD+ Y
Sbjct: 170 PVEKKIGDIAY 180


>sp|ENO_PYRAE|ENOLASE aerophilum (strain ATCC 51768

Query: 2 VDHEAGDLGYQT 13
V H +GD Y+T
Sbjct: 360 VSHRSGDTEYKT 371


>sp|Y942_SACS2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 EAGDLGYQT 13
E DLGY+T
Sbjct: 281 ECEDLGYKT 289


>sp|Y1579_SACI1|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 EAGDLGYQT 13
E DLGY+T
Sbjct: 281 ECEDLGYKT 289


>sp|Y1371_SACI2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 EAGDLGYQT 13
E DLGY+T
Sbjct: 281 ECEDLGYKT 289


>sp|Y1334_SACI3|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 EAGDLGYQT 13
E DLGY+T
Sbjct: 281 ECEDLGYKT 289


>sp|Y1284_SACI4|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 EAGDLGYQT 13
E DLGY+T
Sbjct: 281 ECEDLGYKT 289


>sp|Y1269_SACI7|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 EAGDLGYQT 13
E DLGY+T
Sbjct: 281 ECEDLGYKT 289


>sp|Y1268_SACI6|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 5 EAGDLGYQT 13
E DLGY+T
Sbjct: 281 ECEDLGYKT 289


>sp|RL3_METKA|LARGE ribosomal subunit protein uL3|Methanopyrus kandleri (strain AV19 /

Query: 1 PVDHEAGDL 9
P D EAGDL
Sbjct: 122 PKDGEAGDL 130


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 4 HEAGDLGYQ 12
E GDLGY+
Sbjct: 247 QELGDLGYK 255


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 VDHEAGDLGYQ 12
+D EA DLG Q
Sbjct: 188 LDREALDLGLQ 198


>sp|RNZ_NATPD|RIBONUCLEASE Z|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VDHEAGDLGY 11
DH+A LGY
Sbjct: 137 TDHDARSLGY 146


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PVDHEAGDL 9
PVD E+G++
Sbjct: 314 PVDPESGEM 322


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 5 EAGDLGYQ 12
+AG +GYQ
Sbjct: 243 QAGQMGYQ 250


>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HEAGDLGY 11
H GD GY
Sbjct: 178 HNPGDYGY 185


>sp|IXTPA_PICTO|DITP/XTP pyrophosphatase|Picrophilus torridus (strain ATCC 700027

Query: 3 DHEAGDLGY 11
DHE+G + +
Sbjct: 127 DHESGSMNF 135


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 2 VDHEAGDLGYQ 12
VD +G+LG++
Sbjct: 212 VDEVSGELGFE 222






THE END