DDIT4_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|SSFRDWLSPM

>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 SSFRDWLSP 9
S+FRD+L P
Sbjct: 194 SAFRDYLLP 202


>sp|Y1658_PYRIL|UPF0201 protein Pisl_1658|Pyrobaculum islandicum (strain DSM 4184

Query: 3 FRDWLSP 9
F DWL+P
Sbjct: 122 FLDWLAP 128


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 RDWLSP 9
RDWL P
Sbjct: 16 RDWLPP 21


>sp|SYH_PYRIL|HISTIDINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 RDWLSP 9
RDWL P
Sbjct: 16 RDWLPP 21


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 RDWLSP 9
RDWL P
Sbjct: 16 RDWLPP 21


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 SSFRDWLSPM 10
+ F DWLS +
Sbjct: 610 AEFEDWLSAL 619


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 SSFRDWLSPM 10
+ F DWLS +
Sbjct: 610 AEFEDWLSAL 619


>sp|CDC6K_HALMA|ORC1-TYPE DNA replication protein 11|Haloarcula marismortui (strain ATCC

Query: 2 SFRDWLSP 9
SFRD LSP
Sbjct: 184 SFRDDLSP 191


>sp|Y685_PYRNV|UPF0201 protein Tneu_0685|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 FRDWLSP 9
F DWL+P
Sbjct: 122 FLDWLAP 128


>sp|Y593_PYRCJ|UPF0201 protein Pcal_0593|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 FRDWLSP 9
F DWL+P
Sbjct: 122 FIDWLAP 128


>sp|Y1632_PYRAE|UPF0201 protein PAE1632|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 FRDWLSP 9
F DWL+P
Sbjct: 122 FIDWLAP 128


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SFRDWLS 8
+FRDW++
Sbjct: 179 AFRDWVT 185


>sp|PTH_METS5|PEPTIDYL-TRNA hydrolase|Metallosphaera sedula (strain ATCC 51363

Query: 1 SSFRDWL 7
SS+RDWL
Sbjct: 37 SSWRDWL 43


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 1 SSFRDWLSPM 10
+S DWL P+
Sbjct: 285 ASREDWLKPL 294


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SSFRDWL 7
SSFRD+L
Sbjct: 194 SSFRDYL 200


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 3 FRDWLSPM 10
F DWLS +
Sbjct: 578 FEDWLSAL 585


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 DWLSP 9
DWLSP
Sbjct: 307 DWLSP 311


>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SSFRDWLSPM 10
SFRD L P+
Sbjct: 97 KSFRDILDPL 106


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 SFRDWLSPM 10
S RDWL +
Sbjct: 326 SLRDWLRSL 334


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SSFRDW 6
S+F+DW
Sbjct: 89 STFKDW 94


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 3 FRDWLSPM 10
F DWLS +
Sbjct: 621 FEDWLSAL 628


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SSFRDWL 7
S F+DWL
Sbjct: 194 SGFQDWL 200


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 4 RDWLS 8
RDWLS
Sbjct: 357 RDWLS 361


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 4 RDWLS 8
RDWLS
Sbjct: 357 RDWLS 361


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 FRDWLSP 9
FR WL P
Sbjct: 294 FRVWLKP 300


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 2 SFRDWLSP 9
SF+D+L P
Sbjct: 203 SFKDFLDP 210


>sp|HDRE_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina thermophila

Query: 3 FRDWLS 8
FR+WLS
Sbjct: 148 FREWLS 153


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 5 DWLSPM 10
DWL+P+
Sbjct: 271 DWLNPI 276


>sp|MOBA_THEKO|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus kodakarensis

Query: 1 SSFRDWL 7
SSFRD+L
Sbjct: 134 SSFRDFL 140


>sp|SPEE_AERPE|POLYAMINE aminopropyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SSFRDWLSP 9
S F +WL+P
Sbjct: 14 SWFLEWLTP 22


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 5 DWLSP 9
DWLSP
Sbjct: 273 DWLSP 277


>sp|DP2S_HALSA|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 2 SFRDWL 7
SF DWL
Sbjct: 275 SFADWL 280


>sp|DP2S_HALS3|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 2 SFRDWL 7
SF DWL
Sbjct: 275 SFADWL 280


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SSFRDWLS 8
+ F+DW+S
Sbjct: 441 ARFKDWIS 448


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SSFRDWLS 8
+ F+DW+S
Sbjct: 434 ARFKDWVS 441




2|SequenceR|15|6|SSTSSSSFRD

***** No hits found ******


3|SequenceR|20|11|LSSPSSSTSS

***** No hits found ******


4|SequenceR|25|16|TPTRPLSSPS

>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TPTRPLS 7
TP+RP+S
Sbjct: 294 TPSRPMS 300


>sp|METK_METTM|S-ADENOSYLMETHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 TPTRPLS 7
TP RP+S
Sbjct: 294 TPNRPMS 300


>sp|METK_METTH|S-ADENOSYLMETHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 TPTRPLS 7
TP RP+S
Sbjct: 294 TPNRPMS 300


>sp|Y612_METJA|PROBABLE arogenate/prephenate dehydrogenase|Methanocaldococcus jannaschii

Query: 2 PTRPLSSPS 10
PT P+ PS
Sbjct: 119 PTHPMFGPS 127


>sp|METK_METST|S-ADENOSYLMETHIONINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TPTRPLS 7
TP RP+S
Sbjct: 300 TPNRPMS 306


>sp|METK_METTP|S-ADENOSYLMETHIONINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TPTRPLS 7
TP RP+S
Sbjct: 292 TPNRPMS 298


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TPTRPLS 7
TP RP+S
Sbjct: 291 TPNRPMS 297


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TPTRPLS 7
TP RP+S
Sbjct: 293 TPNRPMS 299


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TPTRPLS 7
TP RP+S
Sbjct: 291 TPNRPMS 297


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TPTRPLS 7
TP RP+S
Sbjct: 291 TPNRPMS 297


>sp|METK_HALWD|S-ADENOSYLMETHIONINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TPTRPLS 7
TP RP+S
Sbjct: 294 TPNRPMS 300


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 TPTRPLS 7
TP RP+S
Sbjct: 293 TPNRPMS 299


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 1 TPTRPL 6
TPTRPL
Sbjct: 200 TPTRPL 205


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 TPTRPL 6
TPTRPL
Sbjct: 200 TPTRPL 205


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TPTRPL 6
TPTRPL
Sbjct: 383 TPTRPL 388




5|SequenceR|30|21|PPRDPTPTRP

>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PRDPTPTRP 10
PRD P RP
Sbjct: 33 PRDTCPDRP 41


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPRDPTP 7
PPR+P P
Sbjct: 275 PPREPLP 281


>sp|Y1641_METJA|UNCHARACTERIZED protein MJ1641|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PRDPTPTR 9
PR+P P R
Sbjct: 274 PRNPIPER 281


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PPRDPTP 7
PPR+P P
Sbjct: 275 PPREPLP 281


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PPRDPTP 7
PPR+P P
Sbjct: 275 PPREPLP 281


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PPRDPTP 7
PPR+P P
Sbjct: 275 PPREPLP 281


>sp|RS24_NANEQ|SMALL ribosomal subunit protein eS24|Nanoarchaeum equitans (strain

Query: 2 PRDPTPTR 9
P++ TPTR
Sbjct: 27 PKEKTPTR 34


>sp|Y2791_METMA|UPF0758 protein MM_2791|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PPRDPTPTR 9
P DP+P+R
Sbjct: 180 PSGDPSPSR 188


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PRDPTPTRP 10
P DPT T+P
Sbjct: 444 PLDPTKTKP 452


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PRDPTPTRP 10
P DPT T+P
Sbjct: 420 PVDPTATQP 428


>sp|Y1979_METAC|UPF0758 protein MA_1979|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PPRDPTPTR 9
P DP+P+R
Sbjct: 180 PSGDPSPSR 188


>sp|Y2303_METBF|UPF0758 protein Mbar_A2303|Methanosarcina barkeri (strain Fusaro /

Query: 1 PPRDPTPTR 9
P DP+P+R
Sbjct: 180 PSGDPSPSR 188


>sp|RS24_PYRHO|SMALL ribosomal subunit protein eS24|Pyrococcus horikoshii (strain ATCC

Query: 2 PRDPTPTR 9
P +PTP+R
Sbjct: 26 PGEPTPSR 33


>sp|RS24_PYRFU|SMALL ribosomal subunit protein eS24|Pyrococcus furiosus (strain ATCC

Query: 2 PRDPTPTR 9
P +PTP+R
Sbjct: 26 PGEPTPSR 33


>sp|RS24_PYRAB|SMALL ribosomal subunit protein eS24|Pyrococcus abyssi (strain GE5 /

Query: 2 PRDPTPTR 9
P +PTP+R
Sbjct: 26 PGEPTPSR 33


>sp|Y382_METBU|UPF0758 protein Mbur_0382|Methanococcoides burtonii (strain DSM 6242

Query: 1 PPRDPTPTR 9
P DP P+R
Sbjct: 180 PSGDPAPSR 188


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PPRDPTP 7
P RDP P
Sbjct: 198 PARDPEP 204


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 PPRDPTPT 8
PP DP P+
Sbjct: 434 PPVDPDPS 441


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 PPRDPTPT 8
PP DP P+
Sbjct: 434 PPVDPDPS 441


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PPRDPTPTR 9
P RDP P R
Sbjct: 194 PVRDPRPVR 202


>sp|AROA_THEKO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 PPRDPTP 7
PP +P+P
Sbjct: 68 PPEEPSP 74




6|SequenceR|35|26|GWASRPPRDP

>sp|CS3HD_THETK|CRISPR-ASSOCIATED endonuclease Cas3-HD|Thermoproteus tenax (strain ATCC 35583

Query: 2 WASRPP 7
WASRPP
Sbjct: 154 WASRPP 159


>sp|DAPA_METKA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 GWASRPPRDP 10
G AS PPR P
Sbjct: 265 GMASSPPRPP 274


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 RPPRDP 10
RPP DP
Sbjct: 400 RPPEDP 405


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GWASRPPRD 9
GW S P+D
Sbjct: 47 GWPSSNPKD 55


>sp|MPTA_KORCO|GTP cyclohydrolase MptA|Korarchaeum cryptofilum (strain OPF8)

Query: 4 SRPPRDP 10
S PP+DP
Sbjct: 74 SNPPKDP 80


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 WASRPPRDP 10
WA +P R P
Sbjct: 128 WAPKPVRTP 136


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 2 WASRPPRDP 10
WA +P R P
Sbjct: 128 WAPKPVRTP 136


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 WASRPPRD 9
+ S PPRD
Sbjct: 105 YGSHPPRD 112


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 WASRPPRD 9
W +RP RD
Sbjct: 300 WVTRPTRD 307


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 WASRPPRD 9
W +RP RD
Sbjct: 300 WVTRPTRD 307


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 RPPRD 9
RPPRD
Sbjct: 203 RPPRD 207


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GWASRPPRDP 10
G A RP RDP
Sbjct: 381 GRAGRPGRDP 390


>sp|HEM3_HYPBU|PROBABLE porphobilinogen deaminase|Hyperthermus butylicus (strain DSM 5456

Query: 2 WASRPPRDP 10
A PPRDP
Sbjct: 92 LAMTPPRDP 100


>sp|RL5_METKA|LARGE ribosomal subunit protein uL5|Methanopyrus kandleri (strain AV19

Query: 2 WASRPPRDP 10
W S P R P
Sbjct: 16 WESNPMRKP 24


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 GWASRPPRD 9
GW PRD
Sbjct: 669 GWEEYGPRD 677


>sp|SYN_PYRFU|ASPARAGINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WASRPPRDP 10
WAS PR P
Sbjct: 421 WASLFPRTP 429


>sp|KAE1_METKA|TRNA N6-adenosine threonylcarbamoyltransferase|Methanopyrus kandleri

Query: 2 WASRPPR 8
WA+RP R
Sbjct: 334 WAARPSR 340


>sp|KTHY_METMJ|PROBABLE thymidylate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GWASRPPR 8
GW+ RP R
Sbjct: 117 GWSIRPDR 124




7|SequenceR|40|31|ERTASGWASR

>sp|ARCH_METAC|PROTEIN archease|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ERTASGWASR 10
E+TA GW ++
Sbjct: 132 EKTADGWKAQ 141


>sp|ARCH_METMA|PROTEIN archease|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ERTASGWASR 10
E+TA GW ++
Sbjct: 132 EKTAGGWKAQ 141


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ERTASGWA 8
ERTA G+A
Sbjct: 211 ERTADGFA 218


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 RTASGW 7
RTA+GW
Sbjct: 585 RTAAGW 590


>sp|COFC_METTP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 1 ERTASGWAS 9
E TA+GW +
Sbjct: 87 ENTAAGWPA 95




8|SequenceR|45|36|RDFGEERTAS

>sp|FEN_PYRAR|FLAP endonuclease 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DFGEERT 8
DFGEER
Sbjct: 317 DFGEERV 323


>sp|MOBA_THEKO|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus kodakarensis

Query: 1 RDFGEERTAS 10
RDF EER S
Sbjct: 137 RDFLEERIKS 146


>sp|RL15_HALMA|LARGE ribosomal subunit protein uL15|Haloarcula marismortui (strain ATCC

Query: 2 DFGEERTA 9
D GEER A
Sbjct: 145 DLGEERQA 152


>sp|FEN_PYRNV|FLAP endonuclease 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DFGEERTA 9
DF EER A
Sbjct: 317 DFSEERVA 324




9|SequenceR|50|41|ELSTSRDFGE

>sp|MCH_METBU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 3 STSRDFGE 10
STSRDFG+
Sbjct: 257 STSRDFGK 264


>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LSTSRDFGE 10
LSTSR+ G+
Sbjct: 164 LSTSRELGK 172


>sp|Y028_PYRCJ|MEMO1 family protein Pcal_0028|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LSTSRDFGE 10
LSTSR+ G+
Sbjct: 164 LSTSRELGK 172


>sp|Y1105_PYRIL|MEMO1 family protein Pisl_1105|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LSTSRDFGE 10
LSTSR+ G+
Sbjct: 164 LSTSRELGK 172


>sp|MCH_ARCFU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 TSRDFGE 10
TSRD+G+
Sbjct: 253 TSRDYGK 259


>sp|MCH_METAR|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocella arvoryzae (strain DSM 22066

Query: 3 STSRDFGE 10
STS+D+G+
Sbjct: 255 STSKDYGK 262


>sp|Y818_PYRAE|MEMO1 family protein PAE0818|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LSTSRDFG 9
LSTSR+ G
Sbjct: 164 LSTSRELG 171


>sp|MCH_METBF|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 3 STSRDFGE 10
+TS+DFG+
Sbjct: 258 TTSQDFGK 265


>sp|Y237_THEAC|MEMO1 family protein Ta0237|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ELSTSRDFGE 10
E+ +RD GE
Sbjct: 154 EIDVARDIGE 163


>sp|PELO_THEVO|PROTEIN pelota homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LSTSRDFGE 10
+STS D GE
Sbjct: 314 VSTSNDMGE 322


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 ELSTSRDFGE 10
ELS + D GE
Sbjct: 38 ELSNTADIGE 47


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 ELSTSRDFGE 10
ELS + D GE
Sbjct: 38 ELSNTADIGE 47


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 ELSTSRDFGE 10
ELST DF +
Sbjct: 95 ELSTGGDFAD 104




10|SequenceR|55|46|ECDSSELSTS

***** No hits found ******


11|SequenceR|60|51|SSDLSECDSS

>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SDLSECD 8
+DL ECD
Sbjct: 336 ADLRECD 342


>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SSDLSECD 8
SSD+SE D
Sbjct: 251 SSDISEMD 258


>sp|SPH2_HALSA|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 700922

Query: 2 SDLSECDS 9
SDL ECD
Sbjct: 195 SDLDECDQ 202


>sp|SPH2_HALS3|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 29341

Query: 2 SDLSECDS 9
SDL ECD
Sbjct: 195 SDLDECDQ 202




12|SequenceR|65|56|GFGSNSSDLS

>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 GFGSNSSDL 9
G GS SSDL
Sbjct: 107 GLGSPSSDL 115




13|SequenceR|70|61|TDEEPGFGSN

>sp|IF2P_IGNH4|PROBABLE translation initiation factor IF-2|Ignicoccus hospitalis (strain

Query: 3 EEPGFGS 9
EEPG+GS
Sbjct: 250 EEPGYGS 256


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 3 EEPGFG 8
EEPGFG
Sbjct: 285 EEPGFG 290


>sp|HFLX_METJA|GTPASE HflX|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EEPGFG 8
E+PGFG
Sbjct: 133 EQPGFG 138


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM 4184

Query: 1 TDEEPGFG 8
+DE PG+G
Sbjct: 346 SDELPGYG 353


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 TDEEPGFG 8
+DE PG+G
Sbjct: 346 SDELPGYG 353


>sp|IF2P_STAMF|PROBABLE translation initiation factor IF-2|Staphylothermus marinus (strain

Query: 3 EEPGFGS 9
EEPG G+
Sbjct: 249 EEPGLGT 255


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 1 TDEEPGFG 8
+DE PG+G
Sbjct: 346 SDELPGYG 353


>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 1 TDEEPGFG 8
+DE PG+G
Sbjct: 351 SDELPGYG 358


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 1 TDEEPGFG 8
+DE PG+G
Sbjct: 333 SDELPGYG 340


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 TDEEPGFG 8
+DE PG+G
Sbjct: 346 SDELPGYG 353


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 TDEEPGFG 8
+DE PG+G
Sbjct: 346 SDELPGYG 353


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 1 TDEEPGFG 8
+DE PG+G
Sbjct: 336 SDELPGYG 343


>sp|NTPTH_PYRAR|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 PGFGSN 10
PGFGS+
Sbjct: 115 PGFGSD 120


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 1 TDEEPGFG 8
+DE PG+G
Sbjct: 351 SDELPGYG 358


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 5 PGFGSN 10
PGFG N
Sbjct: 200 PGFGKN 205


>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 4 EPGFG 8
EPGFG
Sbjct: 594 EPGFG 598


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 5 PGFGSN 10
PGFG N
Sbjct: 200 PGFGKN 205


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 5 PGFGSN 10
PGFG N
Sbjct: 200 PGFGKN 205


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 2 DEEPGFGS 9
DEE GFG+
Sbjct: 504 DEESGFGT 511


>sp|SRP54_METVS|SIGNAL recognition particle 54 kDa|Methanococcus vannielii (strain ATCC

Query: 5 PGFGSN 10
PGFG N
Sbjct: 352 PGFGGN 357


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 5 PGFGSN 10
PGFG N
Sbjct: 200 PGFGRN 205


>sp|MOBA_METTH|PROBABLE molybdenum cofactor guanylyltransferase|Methanothermobacter

Query: 1 TDEEPGFG 8
TDE PG G
Sbjct: 72 TDELPGAG 79


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EPGFGS 9
+PGFGS
Sbjct: 281 KPGFGS 286




14|SequenceR|75|66|GDLYATDEEP

>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 2 DLYATDEEP 10
D+YATD P
Sbjct: 259 DIYATDHAP 267


>sp|ARGDC_PYRNV|ARGININE decarboxylase proenzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GDLYATDEE 9
G+LY DEE
Sbjct: 18 GELYGVDEE 26


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GDLYATDEEP 10
GDL DEEP
Sbjct: 79 GDLVYMDEEP 88


>sp|ARGDC_HYPBU|ARGININE decarboxylase proenzyme|Hyperthermus butylicus (strain DSM 5456

Query: 1 GDLYATDEE 9
G+LY DEE
Sbjct: 26 GNLYGVDEE 34


>sp|SURE_CALMQ|5'-NUCLEOTIDASE SurE|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 DLYATDEEP 10
D+YATD P
Sbjct: 66 DVYATDGTP 74


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 4 YATDEEP 10
YATDE+P
Sbjct: 294 YATDEKP 300


>sp|HJC_HALVD|CROSSOVER junction endodeoxyribonuclease Hjc|Haloferax volcanii (strain ATCC

Query: 1 GDLYATD 7
GDLY TD
Sbjct: 101 GDLYVTD 107


>sp|ARGDC_PYRAR|ARGININE decarboxylase proenzyme|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GDLYATDEE 9
G+LY DE+
Sbjct: 25 GELYGVDEK 33


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLYATDEEP 10
D+Y DE P
Sbjct: 173 DIYKDDETP 181


>sp|ARGDC_PYRAE|ARGININE decarboxylase proenzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GDLYATDE 8
G+LY DE
Sbjct: 18 GELYGVDE 25


>sp|ARGDC_PYRCJ|ARGININE decarboxylase proenzyme|Pyrobaculum calidifontis (strain DSM

Query: 1 GDLYATDE 8
G+LY DE
Sbjct: 18 GELYGVDE 25


>sp|ARGDC_PYRIL|ARGININE decarboxylase proenzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GDLYATDE 8
G+LY DE
Sbjct: 18 GELYGVDE 25


>sp|PAND_HALWD|ASPARTATE 1-decarboxylase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LYATDEEP 10
LY DE+P
Sbjct: 90 LYVKDEQP 97




15|SequenceR|80|71|DPLSVGDLYA

>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DPLSVGDLYA 10
DPLS DLY+
Sbjct: 128 DPLSAEDLYS 137


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DPLSVGDLYA 10
DPL GD++
Sbjct: 118 DPLRFGDIFG 127


>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DPLSVGDLYA 10
DPL+ G +YA
Sbjct: 286 DPLTGGGIYA 295


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SVGDLYA 10
SVGD YA
Sbjct: 141 SVGDFYA 147


>sp|RL22_METS5|LARGE ribosomal subunit protein uL22|Metallosphaera sedula (strain ATCC

Query: 2 PLSVGDLY 9
P+S+ DLY
Sbjct: 25 PVSIKDLY 32


>sp|HMGCS_PYRIL|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DPLSVGDLY 9
DPL + DLY
Sbjct: 30 DPLRIVDLY 38


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 DPLSVGDLYA 10
D LS+ DLY+
Sbjct: 297 DILSIADLYS 306


>sp|AROD_METMA|3-DEHYDROQUINATE dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PLSVGD 7
PLSVGD
Sbjct: 167 PLSVGD 172


>sp|HMGCS_PYRNV|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DPLSVGDLY 9
DPL + DLY
Sbjct: 30 DPLRIVDLY 38


>sp|CDC6_PYRFU|ORC1-TYPE DNA replication protein|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PLSVGDLYA 10
P + GD+YA
Sbjct: 329 PANTGDVYA 337


>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPLSVGDLY 9
+PL+ G LY
Sbjct: 86 EPLATGKLY 94


>sp|LYSY_NATPD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 DPLSVGDLYA 10
+P+S GDL++
Sbjct: 244 EPVSKGDLWS 253


>sp|Y035_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 DPLSVGDLY 9
DP VG+ Y
Sbjct: 227 DPKEVGEFY 235


>sp|HIS6_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 1 DPLSVGDLY 9
DP+S+ LY
Sbjct: 31 DPVSLASLY 39


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PLSVGD 7
PLS+GD
Sbjct: 587 PLSIGD 592


>sp|Y704_METJA|UNCHARACTERIZED protein MJ0704|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LSVGDLYA 10
+ VGD+YA
Sbjct: 205 IKVGDVYA 212


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DPLSVGDLYA 10
+PLSVG L A
Sbjct: 768 EPLSVGGLGA 777


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 DPLSVGDL 8
DPL VG++
Sbjct: 366 DPLKVGEV 373


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 1 DPLSVGDLYA 10
DPL GD Y
Sbjct: 135 DPLRFGDPYG 144


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DPLSVGDLY 9
DPL + D+Y
Sbjct: 30 DPLRIVDMY 38


>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 1 DPLSVGDLY 9
+PL++ DLY
Sbjct: 225 EPLTLHDLY 233


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DPLSVGDL 8
+PLS GD+
Sbjct: 244 EPLSTGDV 251


>sp|HTR2_NATPH|SENSORY rhodopsin II transducer|Natronomonas pharaonis (Natronobacterium

Query: 5 VGDLYA 10
+GDLYA
Sbjct: 117 IGDLYA 122


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 1 DPLSVGDL 8
DPL GDL
Sbjct: 282 DPLHEGDL 289




16|SequenceR|85|76|SLLEFDPLSV

>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 3 LEFDPLSV 10
LE DPL++
Sbjct: 129 LEIDPLTI 136


>sp|PRIS_METAC|DNA primase small subunit PriS|Methanosarcina acetivorans (strain ATCC

Query: 2 LLEFDPLS 9
L EFDPL+
Sbjct: 345 LEEFDPLN 352


>sp|VHTC_METMA|F420 non-reducing hydrogenase II cytochrome|Methanosarcina mazei (strain

Query: 2 LLEFDP 7
+LEFDP
Sbjct: 214 ILEFDP 219




17|SequenceR|90|81|EDEPDSLLEF

>sp|THII_HALSA|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DEPDSLLEF 10
DEPD+L E+
Sbjct: 368 DEPDALFEW 376


>sp|THII_HALS3|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 DEPDSLLEF 10
DEPD+L E+
Sbjct: 368 DEPDALFEW 376


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DEPDSLLEF 10
DEPD LEF
Sbjct: 560 DEPDDELEF 568


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 2 DEPDSLLEF 10
D P SLLEF
Sbjct: 321 DPPSSLLEF 329


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 1 EDEPDSLLEF 10
+DE ++L+EF
Sbjct: 572 QDELETLMEF 581


>sp|Y3024_HALLT|UNCHARACTERIZED protein Hlac_3024|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 PDSLLEF 10
PD LLEF
Sbjct: 107 PDVLLEF 113




18|SequenceR|95|86|NACLHEDEPD

>sp|Y1404_METJA|UNCHARACTERIZED protein MJ1404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CLHEDEP 9
C+HED P
Sbjct: 80 CVHEDTP 86


>sp|RSGA_METMA|SMALL ribosomal subunit biogenesis GTPase|Methanosarcina mazei (strain

Query: 3 CLHEDEP 9
C H DEP
Sbjct: 295 CTHRDEP 301


>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ACLHEDEP 9
AC H DEP
Sbjct: 213 ACPHRDEP 220


>sp|SFSA_PYRNV|SUGAR fermentation stimulation protein homolog|Pyrobaculum neutrophilum

Query: 1 NACLHEDEPD 10
+ CL DEPD
Sbjct: 3 HVCLPLDEPD 12


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ACLHEDEP 9
AC H D+P
Sbjct: 217 ACPHRDQP 224


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 3 CLHEDE 8
CLHED+
Sbjct: 292 CLHEDD 297


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 HEDEP 9
HEDEP
Sbjct: 138 HEDEP 142


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 HEDEP 9
HEDEP
Sbjct: 138 HEDEP 142


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 5 HEDEP 9
HEDEP
Sbjct: 463 HEDEP 467


>sp|RS12_METHJ|SMALL ribosomal subunit protein uS12|Methanospirillum hungatei JF-1

Query: 1 NACLHE 6
N CLHE
Sbjct: 126 NVCLHE 131


>sp|RS12_METB6|SMALL ribosomal subunit protein uS12|Methanoregula boonei (strain DSM

Query: 1 NACLHE 6
N CLHE
Sbjct: 126 NVCLHE 131


>sp|PXPA_THEKO|5-OXOPROLINASE subunit A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 CLHEDEP 9
CLH D P
Sbjct: 221 CLHGDNP 227


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LHEDEP 9
LHED+P
Sbjct: 457 LHEDKP 462


>sp|NADA_PYRAB|QUINOLINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 NACLHED 7
NACLH++
Sbjct: 219 NACLHDE 225


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 CLHEDEP 9
C H DEP
Sbjct: 213 CPHRDEP 219


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CLHEDEP 9
C H DEP
Sbjct: 212 CPHRDEP 218


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 3 CLHEDEPD 10
+HED PD
Sbjct: 144 AIHEDHPD 151


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 3 CLHEDEPD 10
+HED PD
Sbjct: 144 AIHEDHPD 151


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 ACLHEDEP 9
AC H +EP
Sbjct: 212 ACPHREEP 219


Query: 4 LHEDEPD 10
LH D PD
Sbjct: 436 LHPDHPD 442


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ACLHEDEP 9
AC H +EP
Sbjct: 213 ACPHREEP 220


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NACLHEDE 8
N CL ED+
Sbjct: 35 NICLEEDK 42


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 3 CLHEDEPD 10
CLH D+ D
Sbjct: 405 CLHIDDAD 412




19|SequenceR|100|91|LLQMLNACLH

>sp|PGMI_PYRCJ|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Pyrobaculum calidifontis

Query: 1 LLQMLNACLH 10
L QML A LH
Sbjct: 135 LPQMLTAALH 144


>sp|KPRS_METMA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LLQMLNAC 8
LLQ+++AC
Sbjct: 77 LLQLIDAC 84


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LLQMLNAC 8
LLQ+++AC
Sbjct: 65 LLQLIDAC 72


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 4 MLNACLH 10
MLNA LH
Sbjct: 521 MLNAMLH 527




20|SequenceR|105|96|ALSEQLLQML

>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LSEQLLQML 10
LSEQLL++L
Sbjct: 168 LSEQLLKVL 176




21|SequenceR|110|101|GLRAQALSEQ

***** No hits found ******


22|SequenceR|115|106|APRRSGLRAQ

>sp|DPHB_STAMF|DIPHTHINE synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 APRRSGLRA 9
AP R+GL+A
Sbjct: 120 APSRTGLQA 128


>sp|TRPD_THEAC|ANTHRANILATE phosphoribosyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 3 RRSGLRA 9
RRSG+RA
Sbjct: 199 RRSGMRA 205


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 PRRSGLR 8
PRR GLR
Sbjct: 130 PRRVGLR 136




23|SequenceR|120|111|PMLLRAPRRS

>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PMLLRAPRR 9
P LLR PRR
Sbjct: 300 PTLLRNPRR 308


>sp|TRUB_HALMA|PROBABLE tRNA pseudouridine synthase B|Haloarcula marismortui (strain ATCC

Query: 1 PMLLRAP 7
PM LRAP
Sbjct: 18 PMTLRAP 24




24|SequenceR|125|116|SVLQSPMLLR

***** No hits found ******


25|SequenceR|130|121|EKGVQSVLQS

>sp|Y891_STAMF|UPF0173 metal-dependent hydrolase Smar_0891|Staphylothermus marinus

Query: 1 EKGVQSV 7
EKGVQS+
Sbjct: 88 EKGVQSI 94




26|SequenceR|135|126|ALRLLEKGVQ

>sp|RL18_DESA1|LARGE ribosomal subunit protein uL18|Desulfurococcus amylolyticus (strain

Query: 1 ALRLLEKGVQ 10
ALR LEKGV+
Sbjct: 91 ALRALEKGVE 100


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RLLEKGV 9
RLLEKGV
Sbjct: 384 RLLEKGV 390


>sp|Y27A_AERPE|UPF0175 protein APE_0276a|Aeropyrum pernix (strain ATCC 700893

Query: 1 ALRLLEKGV 9
ALRL EKG+
Sbjct: 33 ALRLYEKGI 41


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 3 RLLEKGV 9
RLLEKGV
Sbjct: 416 RLLEKGV 422


>sp|RL18_AERPE|LARGE ribosomal subunit protein uL18|Aeropyrum pernix (strain ATCC 700893

Query: 1 ALRLLEKGVQ 10
LR LEKGV+
Sbjct: 91 GLRALEKGVR 100


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 3 RLLEKGVQ 10
RLLE+GV+
Sbjct: 141 RLLEEGVK 148


>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RLLEKGV 9
RL+EKGV
Sbjct: 250 RLIEKGV 256


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALRLLEKGVQ 10
A LLEKG++
Sbjct: 430 AKELLEKGIK 439


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ALRLLEKGVQ 10
A LLEKG++
Sbjct: 433 AKELLEKGIK 442


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALRLLEKGV 9
A +LLEKG+
Sbjct: 415 AEKLLEKGI 423


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALRLLEKGV 9
+L L+EKG+
Sbjct: 52 SLELIEKGI 60


>sp|AGOG_PYRAB|N-GLYCOSYLASE/DNA lyase|Pyrococcus abyssi (strain GE5 /

Query: 1 ALRLLEKGV 9
ALR L KG+
Sbjct: 27 ALRYLSKGI 35


>sp|RS7_METKA|SMALL ribosomal subunit protein uS7|Methanopyrus kandleri (strain AV19 /

Query: 1 ALRLLEKGVQ 10
ALRL+ +G Q
Sbjct: 143 ALRLITEGAQ 152


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 ALRLLEKGV 9
+L L+EKGV
Sbjct: 541 SLELIEKGV 549




27|SequenceR|140|131|CPESYALRLL

>sp|RNH2_NANEQ|RIBONUCLEASE HII|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PESYALRLL 10
PE+Y LR+L
Sbjct: 104 PENYKLRIL 112


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PESYALR 8
PES+ALR
Sbjct: 91 PESFALR 97


>sp|TRM56_METLZ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocorpusculum

Query: 2 PESYALRL 9
PESY LR+
Sbjct: 5 PESYILRI 12


>sp|CAS2_HYPBU|CRISPR-ASSOCIATED endoribonuclease Cas2|Hyperthermus butylicus (strain DSM 5456

Query: 2 PESYALRLL 10
PE YA R+L
Sbjct: 69 PEDYARRML 77


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPESYA 6
CPE YA
Sbjct: 359 CPEEYA 364


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 1 CPESYALRL 9
CPE+ +RL
Sbjct: 429 CPENAKIRL 437


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 1 CPESYALRL 9
CPE+ +RL
Sbjct: 429 CPENAEIRL 437


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 1 CPESYALRL 9
CPE+ +RL
Sbjct: 429 CPENAEIRL 437




28|SequenceR|145|136|AGRLGCPESY

>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 AGRLGCPESY 10
+GRLG PE Y
Sbjct: 974 SGRLGTPEQY 983


>sp|Y851_PICTO|UPF0179 protein PTO0851|Picrophilus torridus (strain ATCC 700027

Query: 2 GRLGCPESY 10
GR+ CP+ Y
Sbjct: 128 GRIECPKGY 136


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 AGRLGCPESY 10
+ RLG PE Y
Sbjct: 975 SSRLGTPEQY 984


>sp|RHAD_THEAC|L-RHAMNOSE 1-dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC

Query: 2 GRLGCPE 8
GRLG PE
Sbjct: 215 GRLGLPE 221


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 3 RLGCPESY 10
RLG PE Y
Sbjct: 969 RLGTPEQY 976


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 3 RLGCPESY 10
RLG PE Y
Sbjct: 973 RLGKPEQY 980


>sp|NADE_METMA|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AGRLGCPES 9
+ RLG PES
Sbjct: 171 SSRLGIPES 179


>sp|PURT_HALWD|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Haloquadratum walsbyi

Query: 3 RLGCPES 9
RLG PES
Sbjct: 8 RLGTPES 14


>sp|TRM56_THEAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma acidophilum

Query: 1 AGRLGCPE 8
A RLG PE
Sbjct: 266 AARLGLPE 273


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 3 RLGCPESY 10
RLG PE Y
Sbjct: 929 RLGKPEQY 936


>sp|Y739_METJA|UNCHARACTERIZED protein MJ0739|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GRLGCPESY 10
GRL P+SY
Sbjct: 55 GRLVSPKSY 63


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RLGCPESY 10
RLG PE Y
Sbjct: 1203 RLGKPEMY 1210


>sp|HCGB_METJA|PYRIDINOL guanylyltransferase HcgB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GRLGCPES 9
GRLG P S
Sbjct: 103 GRLGAPGS 110


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 RLGCPESY 10
RLG PE Y
Sbjct: 1225 RLGKPEMY 1232


>sp|NADE_METTH|NH(3)-DEPENDENT NAD(+) synthetase|Methanothermobacter thermautotrophicus (strain

Query: 1 AGRLGCP 7
AGRLG P
Sbjct: 173 AGRLGVP 179


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 2 GRLGCPE 8
GR+G PE
Sbjct: 382 GRMGSPE 388


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 RLGCPESY 10
RLG PE Y
Sbjct: 1522 RLGKPEMY 1529


>sp|OTC_METMA|ORNITHINE carbamoyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LGCPESY 10
+ CPE Y
Sbjct: 179 IACPEGY 185


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RLGCPESY 10
RLG PE Y
Sbjct: 1038 RLGKPEMY 1045


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 3 RLGCPE 8
R+GCP+
Sbjct: 391 RIGCPK 396


>sp|BTUDA_HALSA|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 1 AGRLGCP 7
A R+GCP
Sbjct: 304 ARRVGCP 310


>sp|BTUDA_HALS3|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 1 AGRLGCP 7
A R+GCP
Sbjct: 304 ARRVGCP 310


>sp|PNPH_KORCO|PROBABLE 6-oxopurine nucleoside phosphorylase|Korarchaeum cryptofilum

Query: 1 AGRLGCPES 9
G GCPE+
Sbjct: 189 VGMTGCPEA 197




29|SequenceR|150|141|CVDLLAGRLG

>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 VDLLAGRLG 10
+DL++GRLG
Sbjct: 970 MDLISGRLG 978


>sp|HJC_METJA|CROSSOVER junction endodeoxyribonuclease Hjc|Methanocaldococcus jannaschii

Query: 2 VDLLAGRLG 10
VDL+AGR G
Sbjct: 35 VDLIAGRKG 43


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 VDLLAGRLG 10
+DL++GRLG
Sbjct: 975 MDLVSGRLG 983


>sp|Y778_AERPE|PUTATIVE HTH-type transcriptional regulatory protein|Aeropyrum pernix

Query: 2 VDLLAGRLG 10
VDL+AGR G
Sbjct: 239 VDLVAGRSG 247


>sp|AROK_METMA|SHIKIMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CVDLLAGRLG 10
CV+L+ GR G
Sbjct: 64 CVELVLGRFG 73


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CVDLLAG 7
C+D LAG
Sbjct: 388 CIDFLAG 394


>sp|HIS6_METLZ|IMIDAZOLE glycerol phosphate synthase subunit|Methanocorpusculum labreanum

Query: 1 CVDLLAGRL 9
C+DL AGR+
Sbjct: 10 CLDLKAGRV 18


>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CVDLLAG 7
C+D LAG
Sbjct: 388 CIDYLAG 394


>sp|Y758_ARCFU|UNCHARACTERIZED protein AF_0758|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CVDLLAGRL 9
C++L GRL
Sbjct: 114 CINLSTGRL 122


>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CVDLLAGR 8
C++ LAG+
Sbjct: 390 CIEFLAGK 397


>sp|RTCA_HALSA|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 1 CVDLLA 6
CVDLLA
Sbjct: 314 CVDLLA 319


>sp|RTCA_HALS3|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 1 CVDLLA 6
CVDLLA
Sbjct: 314 CVDLLA 319




30|SequenceR|155|146|KGQEVCVDLL

>sp|RTCA_HALSA|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 4 EVCVDLL 10
E CVDLL
Sbjct: 312 ETCVDLL 318


>sp|RTCA_HALS3|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 4 EVCVDLL 10
E CVDLL
Sbjct: 312 ETCVDLL 318


>sp|GLNK3_ARCFU|NITROGEN regulatory protein GlnK3|Archaeoglobus fulgidus (strain ATCC

Query: 1 KGQEVCVDLL 10
+G+EV VDLL
Sbjct: 58 RGREVEVDLL 67


>sp|GLNK1_ARCFU|NITROGEN regulatory protein GlnK1|Archaeoglobus fulgidus (strain ATCC

Query: 1 KGQEVCVDLL 10
+G+EV VDLL
Sbjct: 58 RGREVEVDLL 67


>sp|NIFH1_METIV|NITROGENASE iron protein 1|Methanobacterium ivanovii

Query: 1 KGQEVCVDL 9
+G+E C+DL
Sbjct: 65 EGEEACMDL 73


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 KGQEVCVD 8
KG VCVD
Sbjct: 235 KGDRVCVD 242


>sp|PGK_THEON|PHOSPHOGLYCERATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 KGQEVCVDLL 10
KG+ V VDLL
Sbjct: 280 KGERVEVDLL 289


>sp|GLNB1_METTH|NITROGEN regulatory protein P-II 1|Methanothermobacter thermautotrophicus

Query: 1 KGQEVCVDLL 10
+G + CVDLL
Sbjct: 50 RGMDYCVDLL 59


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KGQEVCV 7
KG+E+C+
Sbjct: 271 KGKEICL 277


>sp|IF2G_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 2 GQEVCVDLL 10
GQE +DLL
Sbjct: 183 GQEANIDLL 191


>sp|PGK_THESM|PHOSPHOGLYCERATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KGQEVCVDLL 10
KG+ V +DLL
Sbjct: 280 KGERVEIDLL 289


>sp|PGK_PYRWO|PHOSPHOGLYCERATE kinase|Pyrococcus woesei

Query: 1 KGQEVCVDLL 10
KG+ V +DLL
Sbjct: 280 KGERVEIDLL 289


>sp|PGK_PYRHO|PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGQEVCVDLL 10
KG+ V +DLL
Sbjct: 280 KGERVEIDLL 289


>sp|PGK_PYRFU|PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGQEVCVDLL 10
KG+ V +DLL
Sbjct: 280 KGERVEIDLL 289


>sp|ARGB_METJA|ACETYLGLUTAMATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGQEVCVDL 9
KG+E+ VDL
Sbjct: 147 KGEEIEVDL 155


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGQEVCVDLL 10
KG++V VDL+
Sbjct: 87 KGKKVPVDLI 96




31|SequenceR|160|151|VSHCSKGQEV

>sp|GUAAA_METBF|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina barkeri

Query: 1 VSHCSKGQEV 10
VSH KG+E+
Sbjct: 169 VSHTEKGEEL 178


>sp|GUAAA_METMA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina mazei

Query: 1 VSHCSKGQEV 10
VSH KG+E+
Sbjct: 169 VSHTKKGEEL 178


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 4 CSKGQEV 10
C+KG+EV
Sbjct: 51 CAKGREV 57


>sp|GUAAA_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus horikoshii

Query: 1 VSHCSKGQEV 10
V+H KG+E+
Sbjct: 169 VAHTEKGEEI 178


>sp|CAH_METJA|PROBABLE carbonic anhydrase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VSHCSKG 7
V HCSKG
Sbjct: 52 VVHCSKG 58


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 2 SHCSKGQEV 10
S C++G+E+
Sbjct: 466 SECTQGKEI 474


>sp|GUAAA_HALWD|GMP synthase [glutamine-hydrolyzing] subunit A|Haloquadratum walsbyi

Query: 1 VSHCSKGQEV 10
V+H +G+EV
Sbjct: 166 VAHTERGEEV 175


>sp|GUAAA_METAC|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina

Query: 1 VSHCSKGQEV 10
VSH KG E+
Sbjct: 169 VSHTKKGDEL 178


>sp|THIM_METMP|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VSHCSKGQEV 10
V H S G+E+
Sbjct: 169 VDHVSNGKEI 178


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter

Query: 4 CSKGQEV 10
C KG+EV
Sbjct: 49 CEKGREV 55


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain

Query: 4 CSKGQEV 10
C KG+EV
Sbjct: 49 CEKGREV 55


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain

Query: 4 CSKGQEV 10
C KG+EV
Sbjct: 49 CEKGKEV 55


>sp|RNP2_METPE|RIBONUCLEASE P protein component 2|Methanosphaerula palustris (strain ATCC

Query: 1 VSHCSKGQE 9
++ CS+G E
Sbjct: 64 IARCSRGSE 72


>sp|GUAAA_HALMA|GMP synthase [glutamine-hydrolyzing] subunit A|Haloarcula marismortui

Query: 1 VSHCSKGQEV 10
V+H +G+EV
Sbjct: 164 VAHTEEGEEV 173




32|SequenceR|165|156|LALQGVSHCS

>sp|RTCA_METBU|RNA 3'-terminal phosphate cyclase|Methanococcoides burtonii (strain DSM

Query: 3 LQGVSHCS 10
++G+SHCS
Sbjct: 185 IRGISHCS 192


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain KIN4/I

Query: 1 LALQGVSHC 9
L ++G+SHC
Sbjct: 186 LKVRGLSHC 194


>sp|RTCA_ARCFU|RNA 3'-terminal phosphate cyclase|Archaeoglobus fulgidus (strain ATCC

Query: 3 LQGVSHC 9
++GVSHC
Sbjct: 185 VRGVSHC 191


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19 /

Query: 2 ALQGVSHC 9
+++G+SHC
Sbjct: 189 SVRGISHC 196


>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 1 LALQGVSHCS 10
+ +QG+SH S
Sbjct: 207 IEIQGISHAS 216


>sp|HEM1_METMJ|GLUTAMYL-TRNA reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LALQGVSH 8
LAL G+SH
Sbjct: 9 LALAGISH 16


>sp|EF1B_SULTO|ELONGATION factor 1-beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ALQGVSH 8
++QGVSH
Sbjct: 74 SIQGVSH 80


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides burtonii

Query: 1 LALQGVSHC 9
+ L GV+HC
Sbjct: 104 IPLVGVNHC 112


>sp|RTCA_SULTO|RNA 3'-terminal phosphate cyclase|Sulfurisphaera tokodaii (strain DSM

Query: 1 LALQGVSHCS 10
L ++G+SH S
Sbjct: 184 LMIKGISHVS 193


>sp|KAE1_METAR|TRNA N6-adenosine threonylcarbamoyltransferase|Methanocella arvoryzae

Query: 3 LQGVSHC 9
L GV+HC
Sbjct: 101 LMGVNHC 107


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 LALQGVSHC 9
+ L GV+HC
Sbjct: 106 IPLIGVNHC 114


>sp|KAE1B_METBF|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 LALQGVSHC 9
+ L GV+HC
Sbjct: 106 IPLIGVNHC 114


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 LALQGVSHC 9
+ L GV+HC
Sbjct: 106 IPLIGVNHC 114


>sp|KAE1_METTP|TRNA N6-adenosine threonylcarbamoyltransferase|Methanothrix

Query: 3 LQGVSHC 9
L GV+HC
Sbjct: 102 LVGVNHC 108


>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 3 LQGVSHC 9
L GV+HC
Sbjct: 100 LVGVNHC 106


>sp|KAE1B_METMJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 LQGVSHC 9
L GV+HC
Sbjct: 105 LVGVNHC 111


>sp|RTCA_METTP|RNA 3'-terminal phosphate cyclase|Methanothrix thermoacetophila (strain

Query: 5 GVSHC 9
G+SHC
Sbjct: 187 GISHC 191




33|SequenceR|170|161|VLSPDLALQG

>sp|SECD_METJA|PROTEIN-EXPORT membrane protein SecD|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VLSPDLA 7
VLSPDLA
Sbjct: 179 VLSPDLA 185


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 2 LSPDLALQG 10
+SPD LQG
Sbjct: 328 ISPDKMLQG 336


>sp|KTHY2_SULTO|PROBABLE thymidylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LSPDLALQ 9
+SPD+AL+
Sbjct: 130 VSPDIALE 137


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 SPDLALQ 9
SPDLAL+
Sbjct: 63 SPDLALE 69


>sp|PTAS_METTE|PHOSPHATE acetyltransferase|Methanosarcina thermophila

Query: 2 LSPDLALQG 10
L+PD+A+ G
Sbjct: 233 LAPDIAIDG 241


>sp|Y2519_HALMA|PUTATIVE HTH-type transcriptional regulatory protein|Haloarcula marismortui

Query: 1 VLSPDLAL 8
VLSPD A+
Sbjct: 98 VLSPDTAM 105


>sp|Y3058_HALWD|PUTATIVE HTH-type transcriptional regulatory protein|Haloquadratum walsbyi

Query: 1 VLSPDLAL 8
VLSPD A+
Sbjct: 98 VLSPDTAM 105




34|SequenceR|175|166|LQFTPVLSPD

>sp|ARGB_METHJ|ACETYLGLUTAMATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 QFTPVLSP 9
QF PV+SP
Sbjct: 168 QFIPVISP 175


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LQFTPVLSPD 10
++F PV++PD
Sbjct: 187 VKFVPVVAPD 196


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 2 QFTPVLSPD 10
+F PVL+P+
Sbjct: 81 KFEPVLTPE 89


>sp|Y3058_HALWD|PUTATIVE HTH-type transcriptional regulatory protein|Haloquadratum walsbyi

Query: 5 PVLSPD 10
PVLSPD
Sbjct: 97 PVLSPD 102


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 4 TPVLSPD 10
TPV+SPD
Sbjct: 199 TPVVSPD 205


>sp|Y2519_HALMA|PUTATIVE HTH-type transcriptional regulatory protein|Haloarcula marismortui

Query: 5 PVLSPD 10
PVLSPD
Sbjct: 97 PVLSPD 102


>sp|SECD_METJA|PROTEIN-EXPORT membrane protein SecD|Methanocaldococcus jannaschii (strain ATCC

Query: 5 PVLSPD 10
PVLSPD
Sbjct: 178 PVLSPD 183


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LQFTPVLSP 9
L FTP L+P
Sbjct: 227 LSFTPHLAP 235


>sp|PCNA2_SULAC|DNA polymerase sliding clamp 2|Sulfolobus acidocaldarius (strain ATCC

Query: 5 PVLSPD 10
PVLSPD
Sbjct: 111 PVLSPD 116


>sp|Y1499_SULAC|PROBABLE glycosyltransferase Saci_1499|Sulfolobus acidocaldarius (strain

Query: 1 LQFTPVL 7
LQ+TPV+
Sbjct: 305 LQYTPVI 311




35|SequenceR|180|171|RLVLTLQFTP

***** No hits found ******


36|SequenceR|185|176|LRSDLRLVLT

>sp|SYC_METM7|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 LRSDLRL 7
LRSDLRL
Sbjct: 434 LRSDLRL 440


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 LRSDLRL 7
LRSDLRL
Sbjct: 434 LRSDLRL 440




37|SequenceR|190|181|QIKPWLRSDL

>sp|DEOC_THEVO|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IKPWLRSD 9
+KP+LR D
Sbjct: 17 LKPYLRED 24


>sp|MTAD_HALWD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IKPWLRSDL 10
++ WLR D+
Sbjct: 91 LQAWLREDI 99


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 IKPWLRSDL 10
I PWL +L
Sbjct: 80 INPWLTEEL 88


>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 1 QIKPWLRSDL 10
++K W+ SDL
Sbjct: 87 ELKGWIGSDL 96


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 4 PWLRS 8
PWLRS
Sbjct: 31 PWLRS 35


>sp|PRIS_SULTO|DNA primase small subunit PriS|Sulfurisphaera tokodaii (strain DSM

Query: 3 KPWLRSDL 10
K WL SDL
Sbjct: 85 KGWLGSDL 92


>sp|RFRNP_HALVD|RNA-FREE ribonuclease P|Haloferax volcanii (strain ATCC 29605

Query: 3 KPWLRSD 9
+PW R D
Sbjct: 218 RPWTRGD 224




38|SequenceR|195|186|SSFLGQIKPW

>sp|Y541_PYRHO|UNCHARACTERIZED ATP-binding protein PH0541|Pyrococcus horikoshii (strain ATCC

Query: 2 SFLGQIKPW 10
S LG++ PW
Sbjct: 86 SILGKVNPW 94


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila (strain

Query: 1 SSFLGQIKP 9
S+FLG+ KP
Sbjct: 109 SNFLGERKP 117


>sp|MNTP_METMJ|MANGANESE exporter MntP|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SSFLGQIKPW 10
+SF+G PW
Sbjct: 62 ASFVGTYGPW 71


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 3 FLGQIKPW 10
+LG ++PW
Sbjct: 65 YLGPLQPW 72


>sp|MNTP_METS3|MANGANESE exporter MntP|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SSFLGQIKPW 10
SSF+ + PW
Sbjct: 64 SSFVSTVAPW 73


>sp|ENCP4_PYRWO|PUTATIVE type 4B encapsulin shell|Pyrococcus woesei

Query: 1 SSFLGQIK 8
S +LGQIK
Sbjct: 64 SKYLGQIK 71


>sp|ENCP4_PYRFU|PUTATIVE type 4B encapsulin shell|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SSFLGQIK 8
S +LGQIK
Sbjct: 64 SKYLGQIK 71


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 1 SSFLGQIKPW 10
S+ LG+++ W
Sbjct: 121 STILGRVRSW 130


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SFLGQIKPW 10
+FLG+ K W
Sbjct: 439 NFLGEAKDW 447


>sp|RL3_METJA|LARGE ribosomal subunit protein uL3|Methanocaldococcus jannaschii (strain

Query: 3 FLGQIKPW 10
F GQ+K W
Sbjct: 207 FQGQVKRW 214


>sp|PYRE_METMA|OROTATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SSFLGQIKP 9
S F+G +KP
Sbjct: 113 SRFVGDLKP 121


>sp|RTCA_THEKO|RNA 3'-terminal phosphate cyclase|Thermococcus kodakarensis (strain

Query: 4 LGQIKPW 10
+G+I+PW
Sbjct: 165 VGRIEPW 171


>sp|Y1571_ARCFU|UNCHARACTERIZED protein AF_1571|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GQIKPW 10
GQIK W
Sbjct: 270 GQIKKW 275


>sp|MNTP_METAC|MANGANESE exporter MntP|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SSFLGQIKPW 10
SSF+ PW
Sbjct: 62 SSFVSDYAPW 71




39|SequenceR|200|191|FPSNASSFLG

>sp|RNP3_HALMA|RIBONUCLEASE P protein component 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 PSNASSFLG 10
PS AS F+G
Sbjct: 66 PSRASGFVG 74




40|SequenceR|205|196|SFGPLFPSNA

>sp|THIE_METAR|THIAMINE-PHOSPHATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 FGPLFPSNA 10
FGP+FP+ +
Sbjct: 126 FGPVFPTGS 134


>sp|RL13_METMA|LARGE ribosomal subunit protein uL13|Methanosarcina mazei (strain ATCC

Query: 2 FGPLFP 7
FGP FP
Sbjct: 61 FGPYFP 66


>sp|RL13_METBU|LARGE ribosomal subunit protein uL13|Methanococcoides burtonii (strain

Query: 2 FGPLFP 7
FGP FP
Sbjct: 60 FGPYFP 65


>sp|RL13_METBF|LARGE ribosomal subunit protein uL13|Methanosarcina barkeri (strain

Query: 2 FGPLFP 7
FGP FP
Sbjct: 61 FGPYFP 66


>sp|RL13_METAC|LARGE ribosomal subunit protein uL13|Methanosarcina acetivorans (strain

Query: 2 FGPLFP 7
FGP FP
Sbjct: 64 FGPYFP 69


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FGPLFPSN 9
F P+ PSN
Sbjct: 208 FAPIVPSN 215


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 FGPLFPS 8
FGPL P+
Sbjct: 289 FGPLIPN 295


>sp|RL13_METJA|LARGE ribosomal subunit protein uL13|Methanocaldococcus jannaschii

Query: 2 FGPLFP 7
FGP FP
Sbjct: 64 FGPKFP 69


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SFGPLFPSN 9
SFG ++P N
Sbjct: 629 SFGNIYPLN 637


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 FGPLFPSNA 10
FG L P+NA
Sbjct: 7223 FGSLDPANA 7231




41|SequenceR|210|201|LTLSQSFGPL

>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LTLSQSFGPL 10
+TLS+ FG L
Sbjct: 139 MTLSERFGDL 148


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LTLSQSFGP 9
LTL+Q GP
Sbjct: 873 LTLAQGAGP 881


>sp|HIS4_METB6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanoregula boonei (strain DSM

Query: 2 TLSQSFG 8
TLSQ FG
Sbjct: 114 TLSQEFG 120


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TLSQSFGPL 10
T+S+ +GPL
Sbjct: 10 TISKIYGPL 18


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 2 TLSQSFGPL 10
T+S+ +GPL
Sbjct: 7 TISKIYGPL 15


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TLSQSFGPL 10
T+S+ +GPL
Sbjct: 7 TISRIYGPL 15


>sp|OTC_METLZ|ORNITHINE carbamoyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 LTLSQSFGPL 10
LTL + FG L
Sbjct: 139 LTLKEKFGEL 148




42|SequenceR|215|206|RFGTSLTLSQ

>sp|PYRB_METPE|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaerula palustris

Query: 3 GTSLTLS 9
GTSLTLS
Sbjct: 64 GTSLTLS 70


>sp|Y1552_ARCFU|UNCHARACTERIZED transporter AF_1552|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FGTSLTLSQ 10
FG +LTL+Q
Sbjct: 245 FGETLTLTQ 253




43|SequenceR|220|211|KKKIVRFGTS

>sp|HTPX_THEVO|PROTEASE HtpX homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 3 KIVRFGTS 10
KIVR+G+S
Sbjct: 241 KIVRYGSS 248


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 2 KKIVRFGTS 10
KKIV+FG +
Sbjct: 360 KKIVQFGNT 368


>sp|NIKR_THEKO|PUTATIVE nickel-responsive regulator|Thermococcus kodakarensis (strain

Query: 3 KIVRFGTS 10
KI+RFG S
Sbjct: 2 KIIRFGVS 9


>sp|RL34_PYRNV|LARGE ribosomal subunit protein eL34|Pyrobaculum neutrophilum (strain

Query: 2 KKIVRFGTS 10
KKI RFG S
Sbjct: 49 KKIYRFGVS 57


>sp|NIKR_THESM|PUTATIVE nickel-responsive regulator|Thermococcus sibiricus (strain DSM

Query: 3 KIVRFGTS 10
KI+RFG S
Sbjct: 2 KIIRFGVS 9


>sp|GPMPP_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE/MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 3 KIVRFGTS 10
K++ FGTS
Sbjct: 91 KVIEFGTS 98




44|SequenceR|225|216|ESSYLKKKIV

>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SSYLKKKI 9
SSYL KKI
Sbjct: 117 SSYLSKKI 124


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 SSYLKKKI 9
S+YLKKK+
Sbjct: 355 SNYLKKKV 362


>sp|PURA_METST|ADENYLOSUCCINATE synthetase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ESSYLKKKI 9
+S+YL KKI
Sbjct: 116 DSAYLSKKI 124


>sp|Y924_METJA|UNCHARACTERIZED ATP-binding protein MJ0924|Methanocaldococcus jannaschii (strain

Query: 1 ESSYLKKKIV 10
E SY KK+IV
Sbjct: 210 EQSYAKKEIV 219


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 SSYLKKKI 9
S+YLKKK+
Sbjct: 355 SNYLKKKL 362




45|SequenceR|232|221|CEEILLQESSYL

>sp|OGG1_SULAC|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfolobus acidocaldarius (strain ATCC

Query: 4 ILLQESSY 11
ILLQES Y
Sbjct: 72 ILLQESGY 79


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 1 CEEILLQESS 10
C EIL +ESS
Sbjct: 356 CGEILKEESS 365




THE END