DDIT4_HUMAN Blast Output
Archaea
1|Sequence|1|10|MPSLWDRFSS

>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 MPSLWD 6
MPSLWD
Sbjct: 1 MPSLWD 6


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC

Query: 1 MPSLWDRFSS 10
M ++WDR+ +
Sbjct: 24 MTNVWDRYEA 33


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 MPSLWDRFSS 10
M ++WDR+ +
Sbjct: 24 MTNVWDRYEA 33


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 MPSLWDRFSS 10
+PS+ D+F+S
Sbjct: 871 IPSIGDKFAS 880


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 MPSLWDRFS 9
M S+W RF+
Sbjct: 596 MLSMWQRFN 604


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 2 PSLWDRF 8
PSLW R
Sbjct: 329 PSLWKRL 335


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LWDRFSS 10
LW+RF++
Sbjct: 702 LWERFNN 708




2|Sequence|6|15|DRFSSSSTSS

***** No hits found ******


3|Sequence|11|20|SSTSSSPSSL

***** No hits found ******


4|Sequence|16|25|SPSSLPRTPT

>sp|ADEC_METTH|ADENINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SPSSLPRTP 9
+PS +P TP
Sbjct: 107 APSCVPATP 115




5|Sequence|21|30|PRTPTPDRPP

>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PRTPTPDRP 9
PR PDRP
Sbjct: 33 PRDTCPDRP 41


>sp|HEM1_HALWD|GLUTAMYL-TRNA reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 TPTPDRP 9
TP PDRP
Sbjct: 416 TPQPDRP 422


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 1 PRTPTPD 7
P+TPTP+
Sbjct: 268 PKTPTPE 274


>sp|Y1641_METJA|UNCHARACTERIZED protein MJ1641|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PRTPTPDR 8
PR P P+R
Sbjct: 274 PRNPIPER 281


>sp|Y762_ARCFU|UNCHARACTERIZED protein AF_0762|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RTPTPD 7
+TPTPD
Sbjct: 128 KTPTPD 133


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RTPTPDRPP 10
+TP P PP
Sbjct: 516 QTPAPATPP 524


>sp|IF2A_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PRTPTPD 7
PR P PD
Sbjct: 14 PRKPLPD 20


>sp|TRPD_HALWD|ANTHRANILATE phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RTPTPDRPP 10
RT TPDR P
Sbjct: 66 RTITPDRTP 74


>sp|SOXE_SULAC|SULFOCYANIN acidocaldarius (strain ATCC 33909

Query: 3 TPTPDRP 9
TPTP P
Sbjct: 119 TPTPQSP 125


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 PRTPTPD 7
P+TP PD
Sbjct: 131 PKTPAPD 137


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 2 RTPTPD 7
+TPTPD
Sbjct: 257 KTPTPD 262


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 4 PTPDRP 9
P+PDRP
Sbjct: 440 PSPDRP 445


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 5 TPDRP 9
TPDRP
Sbjct: 495 TPDRP 499


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 RTPTPDR 8
R+P PDR
Sbjct: 291 RSPDPDR 297


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 1 PRTPTPDRP 9
P P+PD P
Sbjct: 192 PAPPSPDDP 200


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 4 PTPDRPP 10
P PD PP
Sbjct: 269 PDPDLPP 275


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 4 PTPDRPP 10
P PD PP
Sbjct: 270 PDPDLPP 276


>sp|IF2G_HALLT|TRANSLATION initiation factor 2 subunit|Halorubrum lacusprofundi (strain ATCC

Query: 4 PTPDRPP 10
PTPDR P
Sbjct: 200 PTPDRDP 206


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 4 PTPDRPP 10
P PD PP
Sbjct: 249 PDPDLPP 255




6|Sequence|26|35|PDRPPRSAWG

>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DRPPRSAWG 10
D+PP +WG
Sbjct: 126 DKPPIGSWG 134


>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DRPPRSAWG 10
D+PP +WG
Sbjct: 126 DKPPIGSWG 134


>sp|SYDND_METST|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 PPRSAWG 10
PP S WG
Sbjct: 402 PPHSGWG 408


>sp|DNAG_METMJ|DNA primase DnaG|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DRPPRSAW 9
+RPPR W
Sbjct: 305 ERPPRREW 312


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 PPRSAWG 10
PP S WG
Sbjct: 406 PPHSGWG 412


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PDRPPRSAWG 10
P+ PP WG
Sbjct: 284 PNEPPDIVWG 293


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PPRSAWG 10
PPR WG
Sbjct: 354 PPRYKWG 360


>sp|SYDND_META3|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 PPRSAWG 10
PP S WG
Sbjct: 401 PPHSGWG 407


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus

Query: 2 DRPPRS 7
D+PPRS
Sbjct: 56 DKPPRS 61


>sp|EHAA_METTM|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex

Query: 1 PDRPPRSAW 9
P+RP R +W
Sbjct: 31 PERPARHSW 39


>sp|SYDND_METAC|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 407 PPHAGWG 413


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 DRPPRSAWG 10
D PP S WG
Sbjct: 307 DHPPDSVWG 315


>sp|SYDND_METMA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 407 PPHAGWG 413


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 407 PPHAGWG 413


>sp|EHAA_METTH|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex

Query: 1 PDRPPRSAW 9
P+RP R +W
Sbjct: 31 PERPARHSW 39


>sp|R15PI_METJA|RIBOSE 1,5-bisphosphate isomerase|Methanocaldococcus jannaschii (strain

Query: 4 PPRSAW 9
PP+ AW
Sbjct: 291 PPQGAW 296


>sp|SYDND_METMP|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 401 PPHAGWG 407


>sp|SYD_THEVO|ASPARTATE--TRNA(ASP) ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 391 PPHAGWG 397


>sp|SYDND_METM5|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C5 /

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 401 PPHAGWG 407


>sp|SYDND_METVS|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 401 PPHAGWG 407


>sp|SYDND_METM7|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C7 /

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 401 PPHAGWG 407


>sp|SYDND_METM6|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C6 /

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 401 PPHAGWG 407


>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 401 PPHAGWG 407


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 400 PPHAGWG 406


>sp|SYD_THEAC|ASPARTATE--TRNA(ASP) ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 391 PPHAGWG 397


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 396 PPHAGWG 402


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PDRPPRSAWG 10
P PP WG
Sbjct: 285 PGEPPDIVWG 294


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 397 PPHAGWG 403


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 397 PPHAGWG 403


>sp|RL1_AERPE|LARGE ribosomal subunit protein uL1|Aeropyrum pernix (strain ATCC

Query: 1 PDRPPRSA 8
P+RPP+ A
Sbjct: 55 PNRPPKEA 62


>sp|PYRH_HYPBU|URIDYLATE kinase|Hyperthermus butylicus (strain DSM 5456

Query: 4 PPRSAW 9
PPRS W
Sbjct: 94 PPRSIW 99


>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 393 PPHAGWG 399


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 1 PDRPPRSAWG 10
PD P + WG
Sbjct: 74 PDLPETTVWG 83


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 392 PPHAGWG 398


>sp|SYDND_METKA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 PPRSAWG 10
PP WG
Sbjct: 394 PPHGGWG 400


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 PPRSAWG 10
PP + WG
Sbjct: 393 PPHAGWG 399


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PDRPPRSAWG 10
PD P WG
Sbjct: 173 PDYPEAVRWG 182




7|Sequence|31|40|RSAWGSATRE

>sp|IPYR_SULAC|INORGANIC pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SAWGSAT 8
S WGSAT
Sbjct: 150 SGWGSAT 156


>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 4 WGSAT 8
WGSAT
Sbjct: 141 WGSAT 145




8|Sequence|36|45|SATREEGFDR

>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 4 REEGFDR 10
R+EGFDR
Sbjct: 64 RDEGFDR 70


>sp|PSB1_PYRAE|PROTEASOME subunit beta 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 TREEGFDR 10
TR+EGF R
Sbjct: 182 TRKEGFKR 189


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 REEGFDR 10
RE GFDR
Sbjct: 26 REHGFDR 32


>sp|HEM4_ARCFU|PUTATIVE uroporphyrinogen-III synthase|Archaeoglobus fulgidus (strain ATCC

Query: 4 REEGFD 9
REEGFD
Sbjct: 20 REEGFD 25


>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 REEGFDR 10
RE+GFD+
Sbjct: 343 REKGFDK 349


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 4 REEGFD 9
+EEGFD
Sbjct: 754 KEEGFD 759


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 4 REEGFDR 10
REEGF+R
Sbjct: 24 REEGFER 30


>sp|HDRB1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina acetivorans

Query: 1 SATREEGFD 9
S RE+GFD
Sbjct: 115 SIFREKGFD 123


>sp|KAD6_PYRHO|PUTATIVE adenylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 REEGFDR 10
RE G+DR
Sbjct: 98 RERGYDR 104


>sp|KPRS_THEKO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ATREEGFDR 10
A RE+GF++
Sbjct: 69 ALREKGFEK 77


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ATREEGFD 9
A REEG D
Sbjct: 506 AVREEGVD 513


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 1 SATREEGFD 9
SA RE+G++
Sbjct: 346 SALREQGYE 354




9|Sequence|41|50|EGFDRSTSLE

>sp|TRUA_PICTO|TRNA pseudouridine synthase A|Picrophilus torridus (strain ATCC 700027

Query: 1 EGFDRSTS 8
EGFDRS S
Sbjct: 21 EGFDRSNS 28


>sp|DPCKG_HALMA|GTP-DEPENDENT dephospho-CoA kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EGFDRSTSLE 10
+GFDR+ S++
Sbjct: 79 DGFDRTLSVD 88


>sp|Y289_METJA|UNCHARACTERIZED protein MJ0289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GFDRSTS 8
GFD STS
Sbjct: 140 GFDTSTS 146


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EGFDRSTSLE 10
+GFD++ S+E
Sbjct: 421 QGFDQNRSIE 430


>sp|RSMA_HALSA|PROBABLE ribosomal RNA small subunit|Halobacterium salinarum (strain ATCC

Query: 1 EGFDRSTSLE 10
+GFDR LE
Sbjct: 40 DGFDRGHVLE 49


>sp|RSMA_HALS3|PROBABLE ribosomal RNA small subunit|Halobacterium salinarum (strain ATCC

Query: 1 EGFDRSTSLE 10
+GFDR LE
Sbjct: 40 DGFDRGHVLE 49


>sp|GLCDH_METAR|GLUCOSE 1-dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GFDRSTSLE 10
G DR TS+E
Sbjct: 312 GIDRLTSIE 320




10|Sequence|46|55|STSLESSDCE

***** No hits found ******


11|Sequence|51|60|SSDCESLDSS

>sp|CAS1A_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DCESLDS 9
+C+SLDS
Sbjct: 150 ECQSLDS 156


>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SSDCESLD 8
+SDCE D
Sbjct: 220 NSDCEGTD 227




12|Sequence|56|65|SLDSSNSGFG

>sp|Y413_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 2 LDSSNSGFG 10
L SSN+G G
Sbjct: 211 LPSSNAGLG 219


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDSSNSGF 9
+DS NSGF
Sbjct: 355 IDSINSGF 362


>sp|KDPA_THEVO|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma volcanium (strain

Query: 1 SLDSSNSGFG 10
S+D+SNS F
Sbjct: 537 SIDTSNSVFA 546




13|Sequence|61|70|NSGFGPEEDT

>sp|DAPB_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 SGFGPEED 9
+GF PE+D
Sbjct: 91 TGFTPEQD 98


>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 3 GFGPEED 9
G GPEED
Sbjct: 401 GLGPEED 407


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SGFGPEED 9
SGF PEE+
Sbjct: 297 SGFLPEEE 304


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NSGFGPEED 9
++GFG EED
Sbjct: 156 DNGFGWEED 164


>sp|Y1398_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1398|Methanocaldococcus

Query: 3 GFGPEED 9
GF P+ED
Sbjct: 173 GFKPDED 179


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC

Query: 1 NSGFGPEEDT 10
N+GFG DT
Sbjct: 59 NTGFGSMSDT 68


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC

Query: 1 NSGFGPEEDT 10
N+GFG DT
Sbjct: 59 NTGFGSMSDT 68


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 3 GFGPEED 9
GF PEED
Sbjct: 181 GFYPEED 187


>sp|ACDG_METTH|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanothermobacter

Query: 4 FGPEED 9
FGPEE+
Sbjct: 66 FGPEEN 71


>sp|Y853_THEKO|UPF0284 protein TK0853|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SGFGPEE 8
+GF PEE
Sbjct: 311 AGFSPEE 317




14|Sequence|66|75|PEEDTAYLDG

>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PEEDTAYLDG 10
PEED+ LDG
Sbjct: 233 PEEDSQALDG 242


>sp|COBQ_METM5|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C5 /

Query: 1 PEEDTAYLDG 10
PEED+ L+G
Sbjct: 233 PEEDSQALEG 242


>sp|COBQ_METM6|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C6 /

Query: 1 PEEDTAYLDG 10
PEED+ L+G
Sbjct: 233 PEEDSQALEG 242


>sp|THIL_PYRCJ|THIAMINE-MONOPHOSPHATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EEDTAYLDG 10
E+D AY+DG
Sbjct: 26 EDDVAYVDG 34


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 1 PEEDTAYLDG 10
PEED+ L+G
Sbjct: 233 PEEDSQALEG 242


>sp|Y349_METJA|UNCHARACTERIZED protein MJ0349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEDTAYLDG 10
+ED YLDG
Sbjct: 55 KEDIKYLDG 63


>sp|DAPF_ARCFU|DIAMINOPIMELATE epimerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EDTAYLDG 10
EDTAY+ G
Sbjct: 254 EDTAYMTG 261


>sp|RL3_METJA|LARGE ribosomal subunit protein uL3|Methanocaldococcus jannaschii

Query: 1 PEEDTAYL 8
PEEDT L
Sbjct: 32 PEEDTVRL 39


>sp|TRUA_METTP|TRNA pseudouridine synthase A|Methanothrix thermoacetophila (strain

Query: 2 EEDTAYL 8
EED AYL
Sbjct: 66 EEDRAYL 72


>sp|MTNA_METJA|PUTATIVE methylthioribose-1-phosphate isomerase|Methanocaldococcus

Query: 2 EEDTAYLDG 10
E++ AY+DG
Sbjct: 276 EKEVAYIDG 284


>sp|BIOU_HALMT|(S)-8-AMINO-7-OXONONANOATE synthase BioU|Haloferax mediterranei (strain ATCC 33500

Query: 3 EDTAYLDG 10
ED A+LDG
Sbjct: 218 EDIAHLDG 225


>sp|Y1841_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus (strain

Query: 2 EEDTAYLDG 10
+E TAY+DG
Sbjct: 166 DEPTAYVDG 174


>sp|COBQ_METTH|PROBABLE cobyric acid synthase|Methanothermobacter thermautotrophicus

Query: 1 PEEDTAYL 8
PEED+A L
Sbjct: 235 PEEDSASL 242


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEDTAYLD 9
EED YLD
Sbjct: 467 EEDRVYLD 474


>sp|COBQ_METST|PROBABLE cobyric acid synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PEEDTAYL 8
PEED+A L
Sbjct: 233 PEEDSASL 240


>sp|Y666_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0666|Methanocaldococcus

Query: 2 EEDTAYLDG 10
EED + LDG
Sbjct: 199 EEDISKLDG 207




15|Sequence|71|80|AYLDGVSLPD

>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 2 YLDGVSLPD 10
Y+DGVSL D
Sbjct: 343 YVDGVSLID 351


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 YLDGVSLPD 10
Y+DGVSL D
Sbjct: 343 YVDGVSLID 351


>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YLDGVSLP 9
YLDG SLP
Sbjct: 53 YLDGPSLP 60


>sp|NIKR_METAR|PUTATIVE nickel-responsive regulator|Methanocella arvoryzae (strain DSM

Query: 5 GVSLPD 10
GVSLPD
Sbjct: 9 GVSLPD 14


>sp|NIKR3_METAC|PUTATIVE nickel-responsive regulator 3|Methanosarcina acetivorans (strain

Query: 5 GVSLPD 10
GVSLPD
Sbjct: 9 GVSLPD 14


>sp|NIKR1_METMA|PUTATIVE nickel-responsive regulator 1|Methanosarcina mazei (strain ATCC

Query: 5 GVSLPD 10
GVSLPD
Sbjct: 9 GVSLPD 14


>sp|NIKR2_METMA|PUTATIVE nickel-responsive regulator 2|Methanosarcina mazei (strain ATCC

Query: 5 GVSLPD 10
GVSLPD
Sbjct: 9 GVSLPD 14


>sp|Y1514_METVS|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus vannielii

Query: 2 YLDGVSLP 9
Y +GV+LP
Sbjct: 188 YFEGVNLP 195


>sp|NIKR_METBU|PUTATIVE nickel-responsive regulator|Methanococcoides burtonii (strain DSM

Query: 5 GVSLPD 10
GVSLPD
Sbjct: 9 GVSLPD 14


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 2 YLDGVSLPD 10
YLD LPD
Sbjct: 319 YLDEYRLPD 327


>sp|NIKR1_METAC|PUTATIVE nickel-responsive regulator 1|Methanosarcina acetivorans (strain

Query: 5 GVSLPD 10
G+SLPD
Sbjct: 9 GISLPD 14


>sp|COXX_THEPD|PROTOHEME IX farnesyltransferase|Thermofilum pendens (strain DSM 2475

Query: 1 AYLDGVSLPD 10
AYL+G PD
Sbjct: 27 AYLEGAGKPD 36


>sp|ILVC_METS3|KETOL-ACID reductoisomerase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 2 YLDGVSLP 9
YLDG +P
Sbjct: 140 YLDGFGIP 147


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LDGVSLP 9
+DGVS+P
Sbjct: 184 MDGVSMP 190


>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LDGVSLP 9
+DGVS+P
Sbjct: 77 IDGVSMP 83


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AYLDGVS 7
AY DGVS
Sbjct: 398 AYYDGVS 404


>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YLDGVSLPD 10
Y +G+ +PD
Sbjct: 95 YREGIPIPD 103


>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AYLDGVSLPD 10
A L+G+SL D
Sbjct: 401 ASLEGISLQD 410


>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YLDGVSLPD 10
Y +G+ +PD
Sbjct: 95 YREGIPIPD 103


>sp|DHYS_PYRAE|PROBABLE deoxyhypusine synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AYLDGVSLPD 10
AYL G LP+
Sbjct: 140 AYLLGAELPE 149


>sp|RRP41_CENSY|EXOSOME complex component Rrp41|Cenarchaeum symbiosum (strain A)

Query: 3 LDGVSLPD 10
LDGV PD
Sbjct: 203 LDGVLTPD 210


>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 3 LDGVSLP 9
LDG+ LP
Sbjct: 140 LDGIKLP 146




16|Sequence|76|85|VSLPDFELLS

>sp|PNPH_SACS2|PURINE nucleoside phosphorylase|Saccharolobus solfataricus (strain ATCC

Query: 2 SLPDFEL 8
S PDFEL
Sbjct: 128 STPDFEL 134


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 1 VSLPDFEL 8
V +PDFEL
Sbjct: 99 VIVPDFEL 106


>sp|RL3_PYRAB|LARGE ribosomal subunit protein uL3|Pyrococcus abyssi (strain GE5 /

Query: 1 VSLPDFEL 8
V +PDFEL
Sbjct: 99 VIVPDFEL 106


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SLPDFE 7
SLPDFE
Sbjct: 854 SLPDFE 859


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 1 VSLPDFELLS 10
+ L DF+LLS
Sbjct: 10 IGLDDFDLLS 19


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 1 VSLPDFELLS 10
+ LPDF+ +S
Sbjct: 206 IELPDFKAVS 215


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 VSLPDFELLS 10
VS PD LLS
Sbjct: 265 VSEPDLSLLS 274


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VSLPDFEL 8
V+LPD EL
Sbjct: 95 VALPDLEL 102


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSLPDFE 7
V+LPDF+
Sbjct: 420 VNLPDFD 426


>sp|Y686_METJA|UNCHARACTERIZED protein MJ0686|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSLPDFE 7
V+LPDF+
Sbjct: 22 VALPDFQ 28




17|Sequence|81|90|FELLSDPEDE

>sp|Y692_METTH|UNCHARACTERIZED protein MTH_692|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ELLSDPEDE 10
E+LSDPED+
Sbjct: 292 EMLSDPEDK 300


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FELLSDPE 8
+E+LSDPE
Sbjct: 54 YEVLSDPE 61


>sp|FLAG_METJA|PUTATIVE flagella-related protein G|Methanocaldococcus jannaschii (strain

Query: 1 FELLSDPED 9
FE+++DP D
Sbjct: 55 FEIINDPGD 63


>sp|GGGPS_HYPBU|GERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 FELLSDPE 8
F LLSDPE
Sbjct: 21 FLLLSDPE 28


>sp|THII_THEKO|PROBABLE tRNA sulfurtransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 FELLSDPEDE 10
FEL + PEDE
Sbjct: 338 FELSTLPEDE 347


>sp|OGT_METJA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ELLSDPEDE 10
E++S+PEDE
Sbjct: 38 EVVSNPEDE 46


>sp|FLPA_HALWD|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloquadratum walsbyi (strain DSM

Query: 2 ELLSDPED 9
++LSDPED
Sbjct: 171 DVLSDPED 178


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FELLSDP 7
FELL DP
Sbjct: 211 FELLHDP 217


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 FELLSDPEDE 10
+EL DPEDE
Sbjct: 522 WELNYDPEDE 531


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 1 FELLSDP 7
FELL DP
Sbjct: 211 FELLHDP 217


>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 1 FELLSDPEDE 10
FE+L+D E+E
Sbjct: 633 FEMLADVENE 642


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FELLSDP 7
FELL DP
Sbjct: 211 FELLHDP 217


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 ELLSDPEDE 10
EL+ PEDE
Sbjct: 87 ELMGAPEDE 95


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 FELLSDP 7
FELL DP
Sbjct: 211 FELLHDP 217


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 2 ELLSDPE 8
ELL DPE
Sbjct: 343 ELLEDPE 349


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FELLSDPEDE 10
LLSDPE +
Sbjct: 288 ISLLSDPEKQ 297


>sp|PSTB_METKA|PHOSPHATE import ATP-binding protein PstB|Methanopyrus kandleri (strain AV19

Query: 2 ELLSDPEDE 10
+L +DP+DE
Sbjct: 233 KLFTDPQDE 241


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FELLSDPEDE 10
+ L +DPE+E
Sbjct: 24 YRLFNDPEEE 33




18|Sequence|86|95|DPEDEHLCAN

>sp|OGT_METJA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DPEDEHL 7
+PEDEHL
Sbjct: 42 NPEDEHL 48


>sp|PSA_ARCFU|PROTEASOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DEHLCA 9
DEH+CA
Sbjct: 71 DEHICA 76


>sp|KPRS_PYRHO|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PEDEHL 7
P+DEHL
Sbjct: 57 PQDEHL 62


>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DPEDEH 6
DPE EH
Sbjct: 171 DPESEH 176


>sp|Y1602_METBF|UNCHARACTERIZED protein Mbar_A1602|Methanosarcina barkeri (strain Fusaro /

Query: 2 PEDEHLC 8
P+DE++C
Sbjct: 203 PKDEYVC 209


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 1 DPEDEHLCA 9
DP ++++CA
Sbjct: 540 DPHEDYVCA 548


>sp|Y273_HALLT|PUTATIVE HTH-type transcriptional regulatory protein|Halorubrum

Query: 1 DPEDEHL 7
DP+DEH+
Sbjct: 208 DPDDEHV 214


>sp|AROA_METPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 DPEDEHLCA 9
DP D+H A
Sbjct: 377 DPHDDHRTA 385


>sp|AROA_METMJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 1 DPEDEHLCA 9
DP D+H A
Sbjct: 376 DPHDDHRTA 384


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 DPEDEHL 7
DPEDE +
Sbjct: 527 DPEDEEI 533


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 5 EHLCAN 10
EHLC N
Sbjct: 715 EHLCPN 720


>sp|AATE2_METHJ|A-TYPE ATP synthase subunit E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DPEDEHLCAN 10
DP D +C++
Sbjct: 127 DPADSKICSD 136


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DPEDEHL 7
DP+DE++
Sbjct: 306 DPDDEYM 312




19|Sequence|91|100|HLCANLMQLL

>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HLCANLMQ 8
HLC L+Q
Sbjct: 363 HLCVTLLQ 370


>sp|MPTA_METST|GTP cyclohydrolase MptA|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 HLCANLMQLL 10
++CANL++ L
Sbjct: 87 NICANLVKRL 96




20|Sequence|96|105|LMQLLQESLA

>sp|HEM12_PYRCJ|GLUTAMYL-TRNA reductase 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LMQLLQESL 9
L+QLLQE+L
Sbjct: 381 LIQLLQEAL 389




21|Sequence|101|110|QESLAQARLG

***** No hits found ******


22|Sequence|106|115|QARLGSRRPA

>sp|TRUD_HALMA|PROBABLE tRNA pseudouridine synthase D|Haloarcula marismortui (strain ATCC

Query: 1 QARLGSRRP 9
Q R GSRRP
Sbjct: 196 QQRFGSRRP 204


>sp|Y1063_METJA|UNCHARACTERIZED protein MJ1063|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QARLGSRR 8
QAR GS+R
Sbjct: 8 QARTGSKR 15


>sp|TRUD_HALSA|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain ATCC

Query: 1 QARLGSRRP 9
Q R GS+RP
Sbjct: 176 QQRFGSKRP 184


>sp|TRUD_HALS3|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain ATCC

Query: 1 QARLGSRRP 9
Q R GS+RP
Sbjct: 176 QQRFGSKRP 184


>sp|TRUD_NATPD|PROBABLE tRNA pseudouridine synthase D|Natronomonas pharaonis (strain ATCC

Query: 3 RLGSRRP 9
R GSRRP
Sbjct: 179 RFGSRRP 185


>sp|AATE_HALLT|A-TYPE ATP synthase subunit E|Halorubrum lacusprofundi (strain ATCC

Query: 1 QARLGSRR 8
Q RLG+RR
Sbjct: 72 QERLGARR 79


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 3 RLGSRRPA 10
R GSRRP
Sbjct: 171 RFGSRRPV 178




23|Sequence|111|120|SRRPARLLMP

>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 3 RPARLLMP 10
+P R+LMP
Sbjct: 318 KPKRVLMP 325


>sp|NADK_METTH|NAD kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SRRPARLL 8
+RRPA++L
Sbjct: 142 TRRPAKML 149




24|Sequence|116|125|RLLMPSQLVS

>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RLLMPSQLV 9
RLL P QLV
Sbjct: 161 RLLDPKQLV 169


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RLLMPSQLV 9
RLL P QLV
Sbjct: 161 RLLDPKQLV 169




25|Sequence|121|130|SQLVSQVGKE

>sp|MDH_THETK|MALATE dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 SQLVSQVGKE 10
+Q+V+ +GKE
Sbjct: 94 AQIVANIGKE 103


>sp|TRPD_SULAC|ANTHRANILATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 QLVSQVGK 9
QLV QVGK
Sbjct: 334 QLVRQVGK 341


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 2 QLVSQVGKE 10
+LVS+ GKE
Sbjct: 69 ELVSEFGKE 77


>sp|METK_AERPE|S-ADENOSYLMETHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 QLVSQVGK 9
+LVSQ+GK
Sbjct: 345 KLVSQIGK 352


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6

Query: 2 QLVSQVGKE 10
+LVS +GKE
Sbjct: 69 ELVSDLGKE 77


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5

Query: 2 QLVSQVGKE 10
+LVS +GKE
Sbjct: 69 ELVSDLGKE 77


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7

Query: 2 QLVSQVGKE 10
+LVS +GKE
Sbjct: 69 ELVSDLGKE 77


>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 QLVSQVGK 9
++VSQ+GK
Sbjct: 343 EIVSQIGK 350




26|Sequence|126|135|QVGKELLRLA

>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VGKELLRLA 10
+GKE LRL+
Sbjct: 368 IGKEFLRLS 376


>sp|RS5_PYRAB|SMALL ribosomal subunit protein uS5|Pyrococcus abyssi (strain GE5 /

Query: 1 QVGKELLRLA 10
VGK++LRLA
Sbjct: 169 DVGKKILRLA 178


>sp|RS5_PYRHO|SMALL ribosomal subunit protein uS5|Pyrococcus horikoshii (strain ATCC

Query: 2 VGKELLRLA 10
VGK++LRLA
Sbjct: 170 VGKKILRLA 178


>sp|RS5_PYRFU|SMALL ribosomal subunit protein uS5|Pyrococcus furiosus (strain ATCC

Query: 2 VGKELLRLA 10
VGK++LRLA
Sbjct: 170 VGKKILRLA 178


>sp|PUS10_PYRAR|TRNA pseudouridine synthase Pus10|Pyrobaculum arsenaticum (strain DSM

Query: 1 QVGKELLR 8
++GKELLR
Sbjct: 154 RIGKELLR 161


>sp|RS5_METTH|SMALL ribosomal subunit protein uS5|Methanothermobacter

Query: 2 VGKELLRLA 10
VGK ++RLA
Sbjct: 160 VGKTIMRLA 168


>sp|THIE_PYRAB|THIAMINE-PHOSPHATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 QVGKELLRL 9
+VGKE+ RL
Sbjct: 49 EVGKEIRRL 57


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC

Query: 2 VGKELLRL 9
VG EL+RL
Sbjct: 92 VGSELIRL 99




27|Sequence|131|140|LLRLAYSEPC

>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 LLRLAYSEP 9
++ LAY+EP
Sbjct: 538 VIELAYTEP 546


>sp|RL10E_THEAC|LARGE ribosomal subunit protein uL16|Thermoplasma acidophilum (strain

Query: 2 LRLAYSEPC 10
+RL EPC
Sbjct: 47 MRLVAEEPC 55


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans

Query: 5 AYSEPC 10
AYS PC
Sbjct: 72 AYSPPC 77




28|Sequence|136|145|YSEPCGLRGA

>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 3 EPCGLRGA 10
E CGLR A
Sbjct: 134 EECGLRAA 141


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 1 YSEPCGLRG 9
Y+E C LRG
Sbjct: 375 YAEGCDLRG 383


>sp|APGM_METM5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C5 /

Query: 1 YSEPCGLRGA 10
+SE GL+GA
Sbjct: 232 FSEKTGLKGA 241


>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 5 CGLRGA 10
CG+RGA
Sbjct: 152 CGIRGA 157


>sp|MCRZ_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 5 CGLRGA 10
CG+RGA
Sbjct: 151 CGIRGA 156


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 2 SEPCGLR 8
S+PCG R
Sbjct: 163 SDPCGYR 169


>sp|SYFA_ARCFU|PHENYLALANINE--TRNA ligase alpha subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SEPCGLRG 9
+EP G+RG
Sbjct: 426 TEPLGIRG 433


>sp|FAU1_PYRAR|PROBABLE ribonuclease FAU-1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SEPCGLRG 9
+EP G+RG
Sbjct: 312 AEPVGVRG 319


>sp|PSA_HALSA|PROTEASOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 YSEPCGLR 8
Y EP G+R
Sbjct: 105 YDEPIGVR 112


>sp|PSA_HALS3|PROTEASOME subunit alpha|Halobacterium salinarum (strain ATCC 29341

Query: 1 YSEPCGLR 8
Y EP G+R
Sbjct: 105 YDEPIGVR 112


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 1 YSEPCGLRGA 10
+SE G+RGA
Sbjct: 230 FSERYGIRGA 239




29|Sequence|141|150|GLRGALLDVC

>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 2 LRGALLDVC 10
L+GA+LD C
Sbjct: 133 LKGAVLDYC 141


>sp|YNH2_METBA|UNCHARACTERIZED protein in nifH2 5'region|Methanosarcina barkeri

Query: 1 GLRGALLDVC 10
+RGA+LD C
Sbjct: 98 AVRGAVLDRC 107


>sp|RFCL_HALMA|REPLICATION factor C large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 GLRGALLDV 9
GLRGA+ D+
Sbjct: 193 GLRGAVKDL 201


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GLRGALLDV 9
G RG+L+D+
Sbjct: 373 GYRGSLMDL 381


>sp|Y644_METJA|UNCHARACTERIZED protein MJ0644|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLRGALLDVC 10
G+RG ++D C
Sbjct: 101 GVRGVVIDGC 110


>sp|PURA_PICTO|ADENYLOSUCCINATE synthetase|Picrophilus torridus (strain ATCC 700027

Query: 1 GLRGALLDV 9
G +GA+LD+
Sbjct: 212 GAQGAMLDI 220


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 RGALLDV 9
RGA+LD+
Sbjct: 667 RGAILDI 673


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GLRGALLDV 9
G RG++LD+
Sbjct: 647 GRRGSVLDI 655


>sp|PURA_METTP|ADENYLOSUCCINATE synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GLRGALLDV 9
G +GA LDV
Sbjct: 218 GAQGAFLDV 226


>sp|Y1677_METJA|UPF0056 membrane protein MJ1677|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GLRGALL 7
G+RGALL
Sbjct: 199 GIRGALL 205




30|Sequence|146|155|LLDVCVEQGK

>sp|KAE1_METS5|TRNA N6-adenosine threonylcarbamoyltransferase|Metallosphaera sedula

Query: 2 LDVCVEQG 9
+D+C EQG
Sbjct: 182 IDICAEQG 189


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDVCVEQGK 10
+D+CV+ GK
Sbjct: 22 MDICVKDGK 30


>sp|GCH3_PYRIL|GTP cyclohydrolase III|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LLDVCVEQG 9
LLDVC E G
Sbjct: 145 LLDVCKEYG 153


>sp|RISB_PYRAE|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LLDVCVEQGK 10
+LD+ VE GK
Sbjct: 87 ILDIAVESGK 96


>sp|KAE1_SULAC|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfolobus acidocaldarius

Query: 2 LDVCVEQGK 10
+D+C ++GK
Sbjct: 184 IDICADKGK 192


>sp|KAE1_SACS2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 1 LLDVCVEQG 9
++D+C E+G
Sbjct: 181 VIDICAEKG 189


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 LLDVCVEQGK 10
++VC E+GK
Sbjct: 216 FMEVCTEKGK 225


>sp|RISB_PYRAR|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LLDVCVEQGK 10
+LD+ VE GK
Sbjct: 87 ILDISVESGK 96


>sp|RISB_PYRCJ|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LLDVCVEQGK 10
+LD+ VE GK
Sbjct: 87 ILDLAVESGK 96


>sp|ASPD_METHJ|L-ASPARTATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LLDVCVEQGK 10
LLDV QGK
Sbjct: 102 LLDVARSQGK 111


>sp|KAE1_SACI7|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 LDVCVEQG 9
+D+C E+G
Sbjct: 182 IDICSEKG 189


>sp|KAE1_SACI6|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 LDVCVEQG 9
+D+C E+G
Sbjct: 182 IDICSEKG 189


>sp|KAE1_SACI4|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 LDVCVEQG 9
+D+C E+G
Sbjct: 182 IDICSEKG 189


>sp|KAE1_SACI3|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 LDVCVEQG 9
+D+C E+G
Sbjct: 182 IDICSEKG 189


>sp|KAE1_SACI2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 LDVCVEQG 9
+D+C E+G
Sbjct: 182 IDICSEKG 189


>sp|KAE1_SACI1|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 LDVCVEQG 9
+D+C E+G
Sbjct: 182 IDICSEKG 189


>sp|HPRL2_HALTV|HGPRTASE-LIKE protein 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 LLDVCVEQG 9
LLD+ VE G
Sbjct: 168 LLDITVEDG 176


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 LLDVCVEQG 9
L+D C EQG
Sbjct: 250 LVDKCREQG 258


>sp|CBP1_PYRFU|THERMOSTABLE carboxypeptidase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLDVCVEQGK 10
LLD +E+GK
Sbjct: 186 LLDKILEEGK 195




31|Sequence|151|160|VEQGKSCHSV

>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEQGKSCHSV 10
VE+ K CHS+
Sbjct: 509 VERQKYCHSL 518


>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 QGKSCHSV 10
+GK+CH V
Sbjct: 339 RGKACHPV 346


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 QGKSCH 8
+GK+CH
Sbjct: 203 EGKACH 208


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VEQGKSC 7
VE+GK C
Sbjct: 462 VEEGKRC 468


>sp|Y799_METJA|UNCHARACTERIZED protein MJ0799|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEQGKSCHSV 10
VE+ KSC SV
Sbjct: 126 VEELKSCISV 135


>sp|FOLD_METMJ|BIFUNCTIONAL protein FolD|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EQGKSCHSV 10
EQGK C V
Sbjct: 229 EQGKLCGDV 237


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VEQGKSCH 8
VE+GK+ H
Sbjct: 122 VEEGKNLH 129




32|Sequence|156|165|SCHSVGQLAL

>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 CHSVGQ 7
CH+VGQ
Sbjct: 433 CHAVGQ 438


>sp|ARFB_METFV|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermus fervidus (strain ATCC

Query: 3 HSVGQLAL 10
HSVG LAL
Sbjct: 29 HSVGVLAL 36


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SCHSVGQL 8
SCH G+L
Sbjct: 403 SCHGAGRL 410




33|Sequence|161|170|GQLALDPSLV

>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 2 QLALDPSLV 10
L LDPSL+
Sbjct: 123 HLELDPSLI 131


>sp|RRP41_ARCFU|EXOSOME complex component Rrp41|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GQLALDP 7
GQL LDP
Sbjct: 169 GQLVLDP 175


>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 1 GQLALDPSL 9
GQ+ LDPS+
Sbjct: 250 GQVPLDPSI 258


>sp|ACDE2_METMA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 GQLALDPSLV 10
G LALDP ++
Sbjct: 42 GTLALDPEIL 51


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QLALDPS 8
+LALDPS
Sbjct: 73 KLALDPS 79


>sp|GCH1L_METJA|GTP cyclohydrolase 1 type 2|Methanocaldococcus jannaschii (strain

Query: 3 LALDPSL 9
+ALDPSL
Sbjct: 42 IALDPSL 48


>sp|QUEC_METVS|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GQLALDPSL 9
GQ+ALD L
Sbjct: 35 GQMALDKEL 43




34|Sequence|166|175|DPSLVPTFQL

>sp|AK_METJA|PROBABLE aspartokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPSLVPT 7
DP LVPT
Sbjct: 239 DPRLVPT 245


>sp|MOBA_PYRHO|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus horikoshii

Query: 2 PSLVPTF 8
PSL+P F
Sbjct: 96 PSLIPEF 102


>sp|MOBA_PYRAB|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus abyssi (strain

Query: 2 PSLVPTF 8
PSL+P F
Sbjct: 94 PSLIPEF 100


>sp|IDI2_AERPE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DPSLVPTFQ 9
DPSL TF+
Sbjct: 103 DPSLARTFR 111


>sp|AROC_METAR|CHORISMATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DPSLVP 6
DPS+VP
Sbjct: 329 DPSIVP 334


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain M.16.4

Query: 1 DPSLVP 6
DPS+VP
Sbjct: 118 DPSIVP 123


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 DPSLVP 6
DPS+VP
Sbjct: 118 DPSIVP 123


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 DPSLVP 6
DPS+VP
Sbjct: 118 DPSIVP 123


>sp|TRMY_NATPD|TRNA (pseudouridine(54)-N(1))-methyltransferase|Natronomonas pharaonis

Query: 1 DPSLVPTFQL 10
DPS PTF L
Sbjct: 139 DPSAEPTFVL 148


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 1 DPSLVP 6
DPS+VP
Sbjct: 118 DPSIVP 123


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 DPSLVP 6
DPS+VP
Sbjct: 118 DPSIVP 123


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 DPSLVP 6
DPS+VP
Sbjct: 118 DPSIVP 123


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 DPSLVP 6
DPS+VP
Sbjct: 118 DPSIVP 123


>sp|AROC_PYRAB|CHORISMATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 DPSLVP 6
DPS+VP
Sbjct: 322 DPSIVP 327


>sp|Y326_METJA|PUTATIVE permease MJ0326|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PSLVPTF 8
PS+ PTF
Sbjct: 226 PSIAPTF 232




35|Sequence|171|180|PTFQLTLVLR

>sp|Y1297_METTP|UPF0280 protein Mthe_1297|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PTFQLTLV 8
P FQLTLV
Sbjct: 45 PLFQLTLV 52




36|Sequence|176|185|TLVLRLDSRL

>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 1 TLVLRLD 7
TLVLR+D
Sbjct: 520 TLVLRID 526


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TLVLRLD 7
TLVLR+D
Sbjct: 520 TLVLRID 526




37|Sequence|181|190|LDSRLWPKIQ

>sp|RL2_DESA1|LARGE ribosomal subunit protein uL2|Desulfurococcus amylolyticus (strain

Query: 3 SRLWPKIQ 10
SR+WPK++
Sbjct: 184 SRVWPKVR 191


>sp|HIS8_HALWD|HISTIDINOL-PHOSPHATE aminotransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LDSRLWP 7
LD+R WP
Sbjct: 289 LDARTWP 295


>sp|FEN_METKA|FLAP endonuclease 1|Methanopyrus kandleri (strain AV19 /

Query: 2 DSRLWPKIQ 10
D+ +WPKI+
Sbjct: 263 DTDIWPKIE 271


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 2 DSRLWPKIQ 10
D R WP+I+
Sbjct: 26 DIRSWPEIE 34


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 6 WPKIQ 10
WPK+Q
Sbjct: 3 WPKVQ 7


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDSRLWPKIQ 10
LD+ L+ KIQ
Sbjct: 277 LDTNLYSKIQ 286


>sp|UPPS_PYRAE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrobaculum

Query: 4 RLWPKIQ 10
+LWP+++
Sbjct: 212 KLWPEVE 218


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 1 LDSRLWPKI 9
++ +LWPK+
Sbjct: 617 VEEQLWPKL 625




38|Sequence|186|195|WPKIQGLFSS

>sp|MTRA_METHJ|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanospirillum hungatei JF-1

Query: 1 WPKIQGLFSS 10
WP +QG F +
Sbjct: 11 WPIVQGDFHT 20


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 2 PKIQGLF 8
PK+ GLF
Sbjct: 579 PKVHGLF 585


>sp|Y1071_METJA|UNCHARACTERIZED protein MJ1071|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WPKIQGLF 8
W KI GLF
Sbjct: 222 WDKILGLF 229


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 1 WPKIQG 6
WP+I+G
Sbjct: 30 WPEIEG 35


>sp|EF1B_METLZ|ELONGATION factor 1-beta|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 KIQGLFS 9
KI+GLFS
Sbjct: 63 KIEGLFS 69


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 1 WPKIQGLF 8
W K+ GLF
Sbjct: 832 WEKVFGLF 839


>sp|RL3_THEAC|LARGE ribosomal subunit protein uL3|Thermoplasma acidophilum (strain

Query: 1 WPKIQG 6
WP+I+G
Sbjct: 30 WPEIKG 35


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WPKIQG 6
WP+++G
Sbjct: 791 WPEVEG 796




39|Sequence|191|200|GLFSSANSPF

>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 5 SANSPF 10
SANSPF
Sbjct: 166 SANSPF 171


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 SANSPF 10
SANSPF
Sbjct: 166 SANSPF 171


>sp|PDXS_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus kodakarensis

Query: 1 GLFSSANSP 9
G+F S+N P
Sbjct: 280 GIFKSSNPP 288


>sp|PDXS_THEGJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus gammatolerans

Query: 1 GLFSSANSP 9
G+F S+N P
Sbjct: 280 GIFKSSNPP 288


>sp|PDXS_PYRHO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus horikoshii (strain

Query: 1 GLFSSANSP 9
G+F S+N P
Sbjct: 280 GIFKSSNPP 288


>sp|PDXS_PYRFU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus furiosus (strain ATCC

Query: 1 GLFSSANSP 9
G+F S+N P
Sbjct: 280 GIFKSSNPP 288


>sp|PDXS_PYRAB|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus abyssi (strain GE5 /

Query: 1 GLFSSANSP 9
G+F S+N P
Sbjct: 280 GIFKSSNPP 288


>sp|PDXS_ARCFU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Archaeoglobus fulgidus (strain

Query: 1 GLFSSANSP 9
G+F S+N P
Sbjct: 279 GIFKSSNPP 287


>sp|NAH1_METJA|NA(+)/H(+) antiporter 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLFSSAN 7
GLFSS+N
Sbjct: 176 GLFSSSN 182




40|Sequence|196|205|ANSPFLPGFS

>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ANSPFLPGF 9
ANSPF GF
Sbjct: 167 ANSPFWNGF 175


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 ANSPFLPGF 9
ANSPF GF
Sbjct: 167 ANSPFWNGF 175


>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 2 NSPFLPG 8
NSP++PG
Sbjct: 390 NSPYIPG 396


>sp|NFI_SACS2|ENDONUCLEASE V|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NSPFLPGF 9
N P++PGF
Sbjct: 70 NFPYIPGF 77


>sp|NFI_SACI7|ENDONUCLEASE V|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NSPFLPGF 9
N P++PGF
Sbjct: 70 NFPYIPGF 77


>sp|NFI_SACI6|ENDONUCLEASE V|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NSPFLPGF 9
N P++PGF
Sbjct: 70 NFPYIPGF 77


>sp|NFI_SACI4|ENDONUCLEASE V|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NSPFLPGF 9
N P++PGF
Sbjct: 70 NFPYIPGF 77


>sp|NFI_SACI3|ENDONUCLEASE V|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 NSPFLPGF 9
N P++PGF
Sbjct: 70 NFPYIPGF 77


>sp|NFI_SACI2|ENDONUCLEASE V|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NSPFLPGF 9
N P++PGF
Sbjct: 70 NFPYIPGF 77


>sp|NFI_SACI1|ENDONUCLEASE V|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 NSPFLPGF 9
N P++PGF
Sbjct: 70 NFPYIPGF 77


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 NSPFLPG 8
+SP+LPG
Sbjct: 397 DSPYLPG 403


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 NSPFLPGF 9
N P +PGF
Sbjct: 83 NPPVIPGF 90


>sp|GCS2_NATPD|GLUTAMATE--CYSTEINE ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ANSPFLPGF 9
ANSP+ GF
Sbjct: 167 ANSPYWNGF 175


>sp|GCS2_HALWD|GLUTAMATE--CYSTEINE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ANSPFLPGF 9
ANSP+ GF
Sbjct: 169 ANSPYWNGF 177


>sp|GCS2_HALMA|GLUTAMATE--CYSTEINE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ANSPFLPGF 9
ANSP+ GF
Sbjct: 168 ANSPYWNGF 176


>sp|Y730_METJA|UNCHARACTERIZED protein MJ0730|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ANSPFLPG 8
AN+PFL G
Sbjct: 67 ANAPFLVG 74


>sp|GCS2_HALSA|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ANSPFLPGF 9
ANSP+ GF
Sbjct: 167 ANSPYWNGF 175


>sp|GCS2_HALS3|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ANSPFLPGF 9
ANSP+ GF
Sbjct: 167 ANSPYWNGF 175


>sp|NFI_THEAC|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma acidophilum (strain

Query: 2 NSPFLPGF 9
N P++PG+
Sbjct: 180 NFPYIPGY 187


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 NSPFLPGF 9
N P LPGF
Sbjct: 454 NGPPLPGF 461


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 4 PFLPGF 9
P LPGF
Sbjct: 144 PMLPGF 149


>sp|NFI_IGNH4|ENDONUCLEASE V|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PFLPGF 9
P++PGF
Sbjct: 72 PYVPGF 77


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 2 NSPFLPGFS 10
NSP +PG +
Sbjct: 223 NSPIIPGIT 231


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 NSPFLPGF 9
N P LPGF
Sbjct: 454 NGPPLPGF 461


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 PFLPGFS 10
P LPGF+
Sbjct: 144 PMLPGFA 150


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 NSPFLPG 8
NSP+ PG
Sbjct: 199 NSPWCPG 205


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 NSPFLPG 8
NSP+ PG
Sbjct: 199 NSPWCPG 205


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 NSPFLPG 8
NSP+ PG
Sbjct: 201 NSPWCPG 207


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NSPFLPG 8
+SP++PG
Sbjct: 403 SSPYIPG 409


>sp|KHSE_PYRAE|HOMOSERINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ANSPFLPGFS 10
A +P++PG++
Sbjct: 223 ARAPYVPGYA 232


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ANSPFLP 7
AN PF+P
Sbjct: 177 ANIPFIP 183


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 PFLPG 8
PFLPG
Sbjct: 69 PFLPG 73


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 ANSPFLPG 8
A++P++PG
Sbjct: 8 AHAPYVPG 15


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 4 PFLPG 8
PFLPG
Sbjct: 561 PFLPG 565




41|Sequence|201|210|LPGFSQSLTL

>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPGFSQSLT 9
LPG++ SLT
Sbjct: 227 LPGYNDSLT 235




42|Sequence|206|215|QSLTLSTGFR

>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 4 TLSTGF 9
TLSTGF
Sbjct: 343 TLSTGF 348


>sp|HIS3_ARCFU|PHOSPHORIBOSYL-AMP cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LTLSTGF 9
LTL TGF
Sbjct: 36 LTLKTGF 42


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 TLSTGF 9
TLSTGF
Sbjct: 344 TLSTGF 349




43|Sequence|211|220|STGFRVIKKK

>sp|DCDB_METTH|DCTP deaminase, dUMP-forming|Methanothermobacter thermautotrophicus

Query: 3 GFRVIKK 9
GFRVI+K
Sbjct: 45 GFRVIRK 51


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 1 STGFRVIKKK 10
S+GFR++K++
Sbjct: 51 SSGFRIVKEE 60


>sp|RPO3_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum calidifontis (strain DSM

Query: 3 GFRVIKKK 10
FR++KKK
Sbjct: 235 AFRILKKK 242


>sp|RPO3_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GFRVIKKK 10
FR++KKK
Sbjct: 235 AFRILKKK 242


>sp|Y434_METTH|UPF0200 protein MTH_434|Methanothermobacter thermautotrophicus (strain

Query: 1 STGFRVIK 8
S GFRVI+
Sbjct: 25 SMGFRVIR 32


>sp|Y655_ARCFU|METALLOPROTEASE AF_0655|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 STGFRVIK 8
S GFRV+K
Sbjct: 33 SKGFRVLK 40


>sp|NTPTH_PYRHO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TGFRVI 7
TGFRVI
Sbjct: 46 TGFRVI 51




44|Sequence|216|225|VIKKKLYSSE

>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IKKKLYSSE 10
+KKKLY +E
Sbjct: 17 VKKKLYEAE 25


>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VIKKKLYSSE 10
++ KLYSSE
Sbjct: 230 ILANKLYSSE 239




45|Sequence|221|232|LYSSEQLLIEEC

>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LYSSEQLLIEEC 12
L + E+LL+EEC
Sbjct: 230 LRAFEELLMEEC 241


>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SSEQLLIEEC 12
++E+LLI +C
Sbjct: 281 TNEELLISDC 290


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 1 LYSSEQLLIEEC 12
L+S Q L+E C
Sbjct: 295 LFSKGQDLVETC 306


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 2 YSSEQLLIEE 11
Y +EQL IEE
Sbjct: 219 YLNEQLQIEE 228


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 2 YSSEQLLIEE 11
Y EQL IEE
Sbjct: 219 YLREQLKIEE 228


>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SSEQLLIEEC 12
SS +LLI++C
Sbjct: 115 SSARLLIKDC 124


>sp|PURT_SULTO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfurisphaera tokodaii

Query: 4 SEQLLIEE 11
SEQ+++EE
Sbjct: 188 SEQVIVEE 195






THE END