1|SequenceR|10|1|KMIDEVMITM
>sp|POLG_ASGVP|GENOME polyprotein|Apple stem grooving virus (strain
Query: 1 KMIDEVMIT 9
+MI+EV+IT
Sbjct: 648 EMIEEVLIT 656
>sp|KR74_ICHVA|PROTEIN kinase ORF74|Ictalurid herpesvirus 1 (strain Auburn)
Query: 1 KMIDEVMIT 9
+M+DE+M+T
Sbjct: 162 EMLDELMMT 170
>sp|POLG_ASGVK|GENOME polyprotein|Apple stem grooving virus (strain
Query: 1 KMIDEVMIT 9
+MI+EV++T
Sbjct: 648 EMIEEVLVT 656
2|SequenceR|15|6|LSCLLKMIDE
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LSCLLKMIDE 10
LSC+L+M D+
Sbjct: 416 LSCVLRMTDK 425
>sp|CVC1_ALHV1|CAPSID vertex component 1|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 LSCLLKMID 9
SC LK+ID
Sbjct: 40 FSCTLKVID 48
>sp|DPOL_BPCP1|DNA polymerase|Streptococcus phage Cp-1 (Bacteriophage Cp-1)
Query: 1 LSCLLKMID 9
LSC K+ID
Sbjct: 22 LSCFAKVID 30
>sp|NCAP_RINDL|NUCLEOPROTEIN virus (strain L) (RDV)
Query: 1 LSCLLKMIDE 10
L CL+KM+ +
Sbjct: 52 LDCLVKMVGD 61
>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus
Query: 1 LSCLLKMIDE 10
L CLLK +++
Sbjct: 1456 LQCLLKTVND 1465
>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus
Query: 1 LSCLLKMIDE 10
L CLLK +++
Sbjct: 1456 LQCLLKTVND 1465
>sp|P35_NPVAC|EARLY 35 kDa protein|Autographa californica nuclear polyhedrosis virus
Query: 3 CLLKMIDE 10
CL K++DE
Sbjct: 137 CLPKLVDE 144
>sp|YR740_MIMIV|UNCHARACTERIZED protein R740|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 LSCLLKMIDE 10
+ CL+K ID+
Sbjct: 148 IPCLIKPIDD 157
3|SequenceR|20|11|KREGSLSCLL
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 REGSLSC 8
REG+LSC
Sbjct: 440 REGTLSC 446
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 REGSLSC 8
REG LSC
Sbjct: 432 REGELSC 438
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 REGSLSC 8
REG LSC
Sbjct: 440 REGELSC 446
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 REGSLSC 8
REG LSC
Sbjct: 443 REGELSC 449
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 REGSLSC 8
REG LSC
Sbjct: 438 REGELSC 444
>sp|POLN_AURAV|POLYPROTEIN P1234|Aura virus (AURAV)
Query: 3 EGSLSCL 9
EGS+SCL
Sbjct: 2041 EGSVSCL 2047
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 1 KREGSLSCL 9
+REG L CL
Sbjct: 232 EREGELRCL 240
>sp|POL_FIVT2|POL polyprotein|Feline immunodeficiency virus (isolate TM2)
Query: 1 KREGSLSC 8
KREG SC
Sbjct: 5 KREGGASC 12
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 REGSLSC 8
REG LSC
Sbjct: 307 REGFLSC 313
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 REGSLSC 8
REG LSC
Sbjct: 307 REGFLSC 313
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 REGSLSC 8
REG LSC
Sbjct: 307 REGFLSC 313
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 REGSLSC 8
REG LSC
Sbjct: 307 REGFLSC 313
>sp|FUS_AMPV1|FUSION glycoprotein F0|Avian metapneumovirus (isolate Canada
Query: 2 REGSLSCLL 10
++GS +CLL
Sbjct: 295 KDGSYACLL 303
4|SequenceR|25|16|VAAKMKREGS
>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)
Query: 1 VAAKMKREGS 10
VAA+ +REGS
Sbjct: 2105 VAAEFQREGS 2114
>sp|VP4_ROTBS|OUTER capsid protein VP4|Rotavirus C (isolate
Query: 4 KMKREGS 10
K+KREGS
Sbjct: 244 KVKREGS 250
5|SequenceR|30|21|KGSHKVAAKM
>sp|ACB1_BPKVM|ANTI-CBASS protein Acb1|Vibrio phage KVP40 (isolate Vibrio
Query: 2 GSHKVAAKM 10
G H V AKM
Sbjct: 79 GKHAVVAKM 87
6|SequenceR|35|26|TVLAGKGSHK
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 1 TVLAGKGSH 9
+++AG+G+H
Sbjct: 266 SIIAGQGTH 274
>sp|RPB2_FRG3G|PUTATIVE DNA-directed RNA polymerase II|Frog virus 3 (isolate Goorha)
Query: 1 TVLAGKGSH 9
TVL GK SH
Sbjct: 927 TVLVGKVSH 935
>sp|MVP_INSV|MOVEMENT protein|Impatiens necrotic spot virus (INSV)
Query: 1 TVLAGKGSHK 10
TVL G+GS K
Sbjct: 164 TVLKGQGSIK 173
>sp|TF2B_MIMIV|PUTATIVE transcription initiation factor IIB-like|Acanthamoeba polyphaga
Query: 1 TVLAGKGSHK 10
T+LAG GS +
Sbjct: 213 TILAGTGSGR 222
>sp|ENV_MLVFF|ENVELOPE glycoprotein|Friend murine leukemia virus (isolate
Query: 1 TVLAGKGSH 9
T+ AGKGS+
Sbjct: 410 TLKAGKGSY 418
7|SequenceR|40|31|FAMAGTVLAG
>sp|TMP_BPPCD|PROBABLE tape measure protein|Clostridium phage phiCD119 (strain Clostridium
Query: 1 FAMAGTVLAG 10
A AGTVL+G
Sbjct: 486 MAEAGTVLSG 495
8|SequenceR|45|36|VLGGVFAMAG
>sp|361L_IIV6|PROBABLE cysteine proteinase 361L|Invertebrate iridescent virus 6 (IIV-6)
Query: 1 VLGGVFAMAG 10
V+G VFA+AG
Sbjct: 180 VVGDVFAVAG 189
9|SequenceR|50|41|GPPGGVLGGV
>sp|GB_MUHVS|ENVELOPE glycoprotein B|Murid herpesvirus 1 (strain Smith)
Query: 1 GPPGGVLGGV 10
PPGG GG+
Sbjct: 823 APPGGAHGGL 832
>sp|NSP4_WTV|NON-STRUCTURAL protein 4|Wound tumor virus (WTV)
Query: 1 GPPGGVLGG 9
GPP G+L G
Sbjct: 25 GPPQGLLSG 33
>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain
Query: 1 GPPGGVLG 8
GPPG V+G
Sbjct: 569 GPPGEVMG 576
>sp|BPPB3_BPT5|BASEPLATE hub protein pb3|Escherichia phage T5 (Enterobacteria phage
Query: 3 PGGVLGGV 10
PGGV+G +
Sbjct: 748 PGGVVGAI 755
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PPGGVLGG 9
PPGG++G
Sbjct: 442 PPGGLVGA 449
>sp|SHUT_ADEG1|SHUTOFF protein|Fowl adenovirus A serotype 1
Query: 1 GPPGGVLG 8
G PGGV G
Sbjct: 896 GGPGGVRG 903
>sp|HEPA_EHV2|DNA helicase/primase complex-associated protein|Equine herpesvirus 2
Query: 2 PPGGVL 7
PPGG+L
Sbjct: 362 PPGGIL 367
10|SequenceR|55|46|GGVALGPPGG
>sp|GB_MUHVS|ENVELOPE glycoprotein B|Murid herpesvirus 1 (strain Smith)
Query: 1 GGVALGPPGG 10
GG+ GPPG
Sbjct: 830 GGLESGPPGA 839
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 2 GVALGPP 8
G+A+GPP
Sbjct: 442 GIAIGPP 448
>sp|CAPSD_CYMV|COAT protein|Clover yellow mosaic virus (CYMV)
Query: 4 ALGPPGG 10
AL PPGG
Sbjct: 148 ALSPPGG 154
>sp|DNBI_MUHVS|MAJOR DNA-binding protein|Murid herpesvirus 1 (strain Smith)
Query: 3 VALGPPGG 10
VA GPP G
Sbjct: 552 VAAGPPAG 559
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 GGVALGPPGG 10
G + GPPGG
Sbjct: 59 GRLRRGPPGG 68
>sp|COA4_TTV1K|COAT protein TP4|Thermoproteus tenax virus 1 (strain
Query: 2 GVALGPPG 9
GVA+GP G
Sbjct: 15 GVAIGPDG 22
>sp|GT_LAMBD|TAIL assembly protein GT|Escherichia phage lambda (Bacteriophage lambda)
Query: 1 GGVALGPPG 9
GGV GP G
Sbjct: 237 GGVRFGPDG 245
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GVALGPPGG 10
G GPPGG
Sbjct: 6 GKEAGPPGG 14
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GVALGPPGG 10
G GPPGG
Sbjct: 6 GKEAGPPGG 14
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GVALGPPGG 10
G GPPGG
Sbjct: 6 GKEAGPPGG 14
>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)
Query: 1 GGVALGPPGG 10
GGV P GG
Sbjct: 897 GGVTATPTGG 906
>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)
Query: 1 GGVALGPPGG 10
GGV P GG
Sbjct: 897 GGVTATPTGG 906
>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)
Query: 1 GGVALGPPGG 10
GGV P GG
Sbjct: 897 GGVTATPTGG 906
>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United
Query: 1 GGVALGPPGG 10
GGV P GG
Sbjct: 897 GGVTATPTGG 906
>sp|GH_EHV1B|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain Ab4p)
Query: 2 GVALGPPGG 10
GV L PP G
Sbjct: 169 GVVLSPPRG 177
>sp|GH_EHV1|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain HVS25A)
Query: 2 GVALGPPGG 10
GV L PP G
Sbjct: 169 GVVLSPPRG 177
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 GGVALGPPGG 10
G LGPP G
Sbjct: 284 GDSILGPPSG 293
>sp|VG50_BPML5|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate
Query: 1 GGVALGP 7
GGVA GP
Sbjct: 216 GGVASGP 222
>sp|BEL1_SFVCP|PROTEIN Bel-1|Simian foamy virus (isolate chimpanzee)
Query: 1 GGVALGPPGG 10
G LGPP G
Sbjct: 284 GDSILGPPSG 293
11|SequenceR|60|51|LGGVAGGVAL
>sp|CAPSD_BPE32|MAJOR capsid protein|Escherichia phage Phieco32 (Escherichia coli
Query: 2 GGVAGGV 8
GG+AGGV
Sbjct: 174 GGLAGGV 180
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 2 GGVAGGV 8
GGV GGV
Sbjct: 386 GGVTGGV 392
>sp|TOP5_BPT4|DNA topoisomerase medium subunit|Enterobacteria phage T4
Query: 1 LGGVAGGVA 9
L +AGGVA
Sbjct: 61 LASIAGGVA 69
>sp|VCLAP_EHV2|CARD domain-containing protein E10|Equine herpesvirus 2 (strain 86/87)
Query: 2 GGVAGGV 8
GG+ GGV
Sbjct: 174 GGIGGGV 180
>sp|FUS_NDVTG|FUSION glycoprotein F0|Newcastle disease virus (strain Chicken/United
Query: 1 LGGVAGGVAL 10
+G + GGVAL
Sbjct: 118 IGAIIGGVAL 127
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 LGGVAGGVA 9
LGG GGVA
Sbjct: 140 LGGPLGGVA 148
>sp|FUS_NDVB|FUSION glycoprotein F0|Newcastle disease virus (strain Beaudette
Query: 1 LGGVAGGVAL 10
+G + GGVAL
Sbjct: 118 IGAIIGGVAL 127
12|SequenceR|65|56|MWAGLLGGVA
>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1300 WAKLLGG 1306
>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1298 WAKLLGG 1304
>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1298 WAKLLGG 1304
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1300 WAKLLGG 1306
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1298 WAKLLGG 1304
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1298 WAKLLGG 1304
>sp|VGLG_BDVV|ENVELOPE glycoprotein p57|Borna disease virus (strain V)
Query: 2 WAGLLGGV 9
WA LGGV
Sbjct: 471 WAAWLGGV 478
>sp|VGLG_BDV1|ENVELOPE glycoprotein p57|Borna disease virus 1 (BoDV-1)
Query: 2 WAGLLGGV 9
WA LGGV
Sbjct: 471 WAAWLGGV 478
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1149 WAPLLGG 1155
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1149 WAPLLGG 1155
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 1 MWAGLLG 7
MW G+LG
Sbjct: 224 MWPGVLG 230
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 1 MWAGLLG 7
MW G+LG
Sbjct: 223 MWPGVLG 229
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 WAGLLGG 8
WA L+GG
Sbjct: 1003 WASLMGG 1009
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 WAGLLGG 8
WA L+GG
Sbjct: 1003 WASLMGG 1009
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 WAGLLGG 8
WA L+GG
Sbjct: 1003 WASLMGG 1009
>sp|SCAF_SUHVK|CAPSID scaffolding protein|Suid herpesvirus 1 (strain Kaplan)
Query: 1 MWAGLL 6
MWAGLL
Sbjct: 227 MWAGLL 232
>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)
Query: 2 WAGLLGGV 9
W+ L+GGV
Sbjct: 954 WSELVGGV 961
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 WAGLLGG 8
WA +LGG
Sbjct: 1119 WAHILGG 1125
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1003 WASLLGG 1009
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1003 WASLLGG 1009
13|SequenceR|70|61|FQGSTMWAGL
>sp|SCAF_SUHVK|CAPSID scaffolding protein|Suid herpesvirus 1 (strain Kaplan)
Query: 4 STMWAGL 10
+TMWAGL
Sbjct: 225 ATMWAGL 231
>sp|YL509_MIMIV|UNCHARACTERIZED protein L509|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 FQGSTMWAGL 10
F GST+W+ +
Sbjct: 119 FIGSTLWSNI 128
>sp|NRAM_I72A5|NEURAMINIDASE A virus (strain A/Shearwater/Australia/1972
Query: 2 QGSTMWAG 9
QG+++WAG
Sbjct: 350 QGNSVWAG 357
>sp|REP_PYMVV|REPLICATION-ASSOCIATED protein|Potato yellow mosaic virus (isolate
Query: 2 QGSTMWA 8
+G TMWA
Sbjct: 226 RGKTMWA 232
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 FQGSTMWAG 9
++ STMW G
Sbjct: 7112 WRNSTMWNG 7120
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 FQGSTMWAG 9
++ STMW G
Sbjct: 7108 WRNSTMWNG 7116
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 1 FQGSTMWAG 9
++ STMW G
Sbjct: 7056 WRNSTMWNG 7064
>sp|REP_TYLCI|REPLICATION-ASSOCIATED protein|Tomato yellow leaf curl virus
Query: 3 GSTMWA 8
G TMWA
Sbjct: 224 GKTMWA 229
>sp|REP_TYLCC|REPLICATION-ASSOCIATED protein|Tomato yellow leaf curl China
Query: 3 GSTMWA 8
G TMWA
Sbjct: 226 GKTMWA 231
>sp|REP_TYCS2|REPLICATION-ASSOCIATED protein|Tomato yellow leaf curl Sardinia
Query: 3 GSTMWA 8
G TMWA
Sbjct: 226 GKTMWA 231
>sp|REP_TYCS1|REPLICATION-ASSOCIATED protein|Tomato yellow leaf curl Sardinia
Query: 3 GSTMWA 8
G TMWA
Sbjct: 226 GKTMWA 231
>sp|REP_TPCTV|REPLICATION-ASSOCIATED protein|Tomato pseudo-curly top virus (TPCTV)
Query: 3 GSTMWA 8
G TMWA
Sbjct: 228 GKTMWA 233
>sp|REP_TGMVY|REPLICATION-ASSOCIATED protein|Tomato golden mosaic virus (strain
Query: 3 GSTMWA 8
G TMWA
Sbjct: 228 GKTMWA 233
>sp|REP_SLCV|REPLICATION-ASSOCIATED protein|Squash leaf curl virus (SLCV)
Query: 3 GSTMWA 8
G TMWA
Sbjct: 223 GKTMWA 228
>sp|REP_MYMVV|REPLICATION-ASSOCIATED protein|Mungbean yellow mosaic virus (strain
Query: 3 GSTMWA 8
G TMWA
Sbjct: 225 GKTMWA 230
>sp|REP_CALCV|REPLICATION-ASSOCIATED protein|Cabbage leaf curl virus (isolate
Query: 3 GSTMWA 8
G TMWA
Sbjct: 225 GKTMWA 230
>sp|REP_BGYMV|REPLICATION-ASSOCIATED protein|Bean golden yellow mosaic virus
Query: 3 GSTMWA 8
G TMWA
Sbjct: 227 GKTMWA 232
>sp|REP_BGYMJ|REPLICATION-ASSOCIATED protein|Bean golden yellow mosaic virus
Query: 3 GSTMWA 8
G TMWA
Sbjct: 227 GKTMWA 232
>sp|VP2_AHSV3|OUTER capsid protein VP2|African horse sickness virus 3
Query: 1 FQGSTMWAG 9
F+G T W G
Sbjct: 942 FEGLTTWIG 950
>sp|NRAM_I85A5|NEURAMINIDASE A virus (strain A/Equine/Santiago/1/1985
Query: 2 QGSTMWAG 9
QG+ +WAG
Sbjct: 353 QGTDVWAG 360
>sp|REP_ABMVW|REPLICATION-ASSOCIATED protein|Abutilon mosaic virus (isolate West
Query: 3 GSTMWA 8
G TMWA
Sbjct: 227 GKTMWA 232
>sp|VG45_ICHVA|UNCHARACTERIZED protein ORF45|Ictalurid herpesvirus 1 (strain Auburn)
Query: 4 STMWAG 9
ST+WAG
Sbjct: 58 STLWAG 63
>sp|NRAM_I91A0|NEURAMINIDASE A virus (strain A/Equine/Alaska/1/1991
Query: 2 QGSTMWAG 9
QG+ +WAG
Sbjct: 353 QGTDVWAG 360
>sp|NRAM_I86A3|NEURAMINIDASE A virus (strain A/Equine/Tennessee/5/1986
Query: 2 QGSTMWAG 9
QG+ +WAG
Sbjct: 353 QGTDVWAG 360
>sp|REP_TMOV|REPLICATION-ASSOCIATED protein|Tomato mottle virus (isolate Florida)
Query: 3 GSTMWA 8
G TMWA
Sbjct: 227 GKTMWA 232
>sp|REP_BCTVC|REPLICATION-ASSOCIATED protein|Beet curly top virus (strain
Query: 3 GSTMWA 8
G TMWA
Sbjct: 227 GKTMWA 232
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 FQGSTMW 7
FQG T+W
Sbjct: 1853 FQGKTVW 1859
>sp|NRAM_I81A2|NEURAMINIDASE A virus (strain A/Equine/Kentucky/1/1981)
Query: 2 QGSTMWAG 9
QG+ +WAG
Sbjct: 353 QGNDVWAG 360
>sp|NRAM_I79A6|NEURAMINIDASE A virus (strain A/Equine/New
Query: 2 QGSTMWAG 9
QG+ +WAG
Sbjct: 353 QGNDVWAG 360
>sp|NRAM_I63A2|NEURAMINIDASE A virus (strain A/Equine/Miami/1/1963
Query: 2 QGSTMWAG 9
QG+ +WAG
Sbjct: 353 QGNDVWAG 360
>sp|NRAM_I69A2|NEURAMINIDASE A virus (strain A/Equine/Sao
Query: 2 QGSTMWAG 9
QG+ +WAG
Sbjct: 353 QGNDVWAG 360
14|SequenceR|75|66|QPVPKFQGST
>sp|NCAP_IBVDE|NUCLEOPROTEIN infectious bronchitis virus (strain
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PQPKFEGS 54
>sp|NCAP_IBVVI|NUCLEOPROTEIN infectious bronchitis virus (strain
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PQPKFEGS 54
>sp|NCAP_CVTIN|NUCLEOPROTEIN coronavirus (strain Indiana) (TCoV)
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PQPKFEGS 54
>sp|NCAP_IBVSA|NUCLEOPROTEIN infectious bronchitis virus (strain
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PQPKFEGS 54
>sp|NCAP_IBVG|NUCLEOPROTEIN infectious bronchitis virus (strain
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PQPKFEGS 54
>sp|NCAP_CVTNC|NUCLEOPROTEIN coronavirus (strain NC95) (TCoV)
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PQPKFEGS 54
>sp|CHLE_MIMIV|PROBABLE cholinesterase|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 PVPKFQGST 10
PVP++ G T
Sbjct: 112 PVPEYHGET 120
>sp|NCAP_IBVH1|NUCLEOPROTEIN infectious bronchitis virus (strain
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PPPKFEGS 54
>sp|NCAP_IBVD1|NUCLEOPROTEIN infectious bronchitis virus (strain
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PPPKFEGS 54
>sp|NCAP_IBVBU|NUCLEOPROTEIN infectious bronchitis virus (strain
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PPPKFEGS 54
>sp|NCAP_IBVBC|NUCLEOPROTEIN infectious bronchitis virus (strain
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PPPKFEGS 54
>sp|NCAP_IBVB|NUCLEOPROTEIN infectious bronchitis virus (strain
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PPPKFEGS 54
>sp|NCAP_IBVH5|NUCLEOPROTEIN infectious bronchitis virus (strain
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PPPKFEGS 54
>sp|NCAP_IBVM|NUCLEOPROTEIN infectious bronchitis virus (strain
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PPPKFEGS 54
>sp|NCAP_CVTMI|NUCLEOPROTEIN coronavirus (strain Minnesota) (TCoV)
Query: 2 PVPKFQGS 9
P PKF+GS
Sbjct: 47 PPPKFEGS 54
>sp|POL2_GCMV|RNA2 polyprotein|Grapevine chrome mosaic virus (GCMV)
Query: 1 QPVPKFQ 7
QPVPK Q
Sbjct: 733 QPVPKHQ 739
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 3 VPKFQGST 10
+PK +GST
Sbjct: 32 IPKIEGST 39
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 3 VPKFQGST 10
+PK +GST
Sbjct: 32 IPKIEGST 39
15|SequenceR|80|71|LEMLIQPVPK
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EMLIQPVPK 10
EM+++ VPK
Sbjct: 5 EMMVRDVPK 13
16|SequenceR|85|76|QEAPPLEMLI
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 2 EAPPLEML 9
E PPLE+L
Sbjct: 184 ECPPLELL 191
>sp|YR450_MIMIV|UNCHARACTERIZED protein R450|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 QEAPPLEML 9
+EAPP E+L
Sbjct: 272 KEAPPKELL 280
>sp|VGLN_ARV|NON-STRUCTURAL glycoprotein|Adelaide River virus (ARV)
Query: 2 EAPPLEMLI 10
+APPLE +I
Sbjct: 313 KAPPLENMI 321
>sp|GH_EHV4|ENVELOPE glycoprotein H|Equine herpesvirus 4 (strain 1942)
Query: 4 PPLEMLI 10
PPLEM++
Sbjct: 270 PPLEMIV 276
>sp|GH_EHV1B|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain Ab4p)
Query: 4 PPLEMLI 10
PPLEM++
Sbjct: 263 PPLEMIV 269
>sp|GH_EHV1|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain HVS25A)
Query: 4 PPLEMLI 10
PPLEM++
Sbjct: 263 PPLEMIV 269
>sp|GAG_SIVTN|GAG polyprotein|Simian immunodeficiency virus (isolate TAN1)
Query: 3 APPLEM 8
APPLEM
Sbjct: 503 APPLEM 508
>sp|GH_GAHVR|ENVELOPE glycoprotein H|Gallid herpesvirus 2 (strain RB-1b)
Query: 1 QEAPPLEMLI 10
+ APP+E+++
Sbjct: 232 KSAPPVELIL 241
>sp|GH_GAHVM|ENVELOPE glycoprotein H|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 QEAPPLEMLI 10
+ APP+E+++
Sbjct: 232 KSAPPVELIL 241
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 414 QERPPLE 420
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 414 QERPPLE 420
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 414 QERPPLE 420
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 414 QERPPLE 420
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 414 QERPPLE 420
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QEAPPLEML 9
++APPL +L
Sbjct: 202 EKAPPLSLL 210
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 410 QERPPLE 416
17|SequenceR|90|81|NFLRQQEAPP
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 2 FLRQQEAPP 10
FLR QE PP
Sbjct: 519 FLRYQELPP 527
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 2 FLRQQEAPP 10
FLR QE PP
Sbjct: 519 FLRYQELPP 527
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 2 FLRQQEAPP 10
FLR QE PP
Sbjct: 519 FLRYQELPP 527
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 2 FLRQQEAPP 10
FLR QE PP
Sbjct: 519 FLRYQELPP 527
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 2 FLRQQEAPP 10
FLR QE PP
Sbjct: 519 FLRYQELPP 527
>sp|VF423_ASFWA|UNCHARACTERIZED protein E423R|African swine fever virus (isolate
Query: 1 NFLRQQEAPP 10
+FLRQQ++ P
Sbjct: 347 DFLRQQDSWP 356
>sp|NEC1_SHV21|NUCLEAR egress protein 1|Saimiriine herpesvirus 2 (strain 11)
Query: 1 NFLRQQEAP 9
+FLR+ +AP
Sbjct: 41 DFLREMDAP 49
>sp|VF423_ASFP4|UNCHARACTERIZED protein E423R|African swine fever virus (isolate
Query: 1 NFLRQQEAPP 10
+FLRQQ++ P
Sbjct: 347 DFLRQQDSWP 356
>sp|VF423_ASFK5|UNCHARACTERIZED protein E423R|African swine fever virus (isolate
Query: 1 NFLRQQEAPP 10
+FLRQQ++ P
Sbjct: 347 DFLRQQDSWP 356
>sp|VF423_ASFB7|UNCHARACTERIZED protein E423R|African swine fever virus (strain
Query: 1 NFLRQQEAPP 10
+FLRQQ++ P
Sbjct: 347 DFLRQQDSWP 356
>sp|Y562_SIRV1|UNCHARACTERIZED protein 562|Sulfolobus islandicus rod-shaped virus 1
Query: 1 NFLRQQEAPP 10
NF+R + PP
Sbjct: 535 NFMRMRTYPP 544
18|SequenceR|95|86|IAAAENFLRQ
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 IAAAENFLRQ 10
IAAAE ++RQ
Sbjct: 178 IAAAEVYVRQ 187
>sp|L_MOBVC|RNA-DIRECTED RNA polymerase L|Mobala mammarenavirus (isolate Rat/Central African
Query: 4 AENFLRQ 10
+ENFLRQ
Sbjct: 1839 SENFLRQ 1845
>sp|TRM1_EHV1V|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain V592)
Query: 4 AENFLRQ 10
AENFL+Q
Sbjct: 140 AENFLKQ 146
>sp|TRM1_EHV1B|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain Ab4p)
Query: 4 AENFLRQ 10
AENFL+Q
Sbjct: 140 AENFLKQ 146
>sp|TRM1_EHV1|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain HVS25A)
Query: 4 AENFLRQ 10
AENFL+Q
Sbjct: 140 AENFLKQ 146
>sp|POL1_BRSV|RNA1 polyprotein|Beet ringspot virus (BRSV) (Tomato
Query: 3 AAENFLR 9
AAENFL+
Sbjct: 983 AAENFLK 989
19|SequenceR|100|91|ELHRIIAAAE
>sp|ENLYS_BPML5|ENDOLYSIN A|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 1 ELHRIIAAAE 10
ELHRI+ AA+
Sbjct: 244 ELHRIVLAAK 253
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 ELHRIIAAA 9
E+HRI+A+A
Sbjct: 599 EMHRILASA 607
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 ELHRIIAAAE 10
ELH ++AAA+
Sbjct: 336 ELHPLVAAAQ 345
>sp|YI2_MDBVW|UNCHARACTERIZED protein I2|Microplitis demolitor bracovirus (isolate Webb)
Query: 1 ELHRIIA 7
ELHRII+
Sbjct: 22 ELHRIIS 28
>sp|LMBD2_REOVJ|OUTER capsid protein lambda-2|Reovirus type 2 (strain D5/Jones)
Query: 3 HRIIAAAE 10
HR++AA E
Sbjct: 444 HRVVAAKE 451
20|SequenceR|105|96|VADTWELHRI
>sp|Y02A_BPT4|UNCHARACTERIZED 10.2 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 VADTWEL 7
+ADTWEL
Sbjct: 23 IADTWEL 29
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 1 VADTWELHR 9
V+++WE HR
Sbjct: 371 VSESWEAHR 379
>sp|YI2_MDBVW|UNCHARACTERIZED protein I2|Microplitis demolitor bracovirus (isolate Webb)
Query: 5 WELHRI 10
WELHRI
Sbjct: 21 WELHRI 26
>sp|VPM_BPHC1|PROBABLE terminase, endonuclease subunit|Haemophilus phage HP1 (strain
Query: 1 VADTWELHRI 10
VA W+LH I
Sbjct: 161 VATQWKLHEI 170
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 VADTWELH 8
V D WE+H
Sbjct: 181 VTDQWEVH 188
>sp|POL_FENV1|POL polyprotein|Feline endogenous virus ECE1
Query: 4 TWELHR 9
TW+LHR
Sbjct: 1029 TWKLHR 1034
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 VADTWELHR 9
V +WE HR
Sbjct: 369 VRQSWEAHR 377
>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)
Query: 1 VADTWELHRI 10
VAD ELH I
Sbjct: 1355 VADVRELHEI 1364
>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)
Query: 1 VADTWELHRI 10
VAD ELH I
Sbjct: 1355 VADVRELHEI 1364
>sp|ENV_FLVCS|ENVELOPE glycoprotein|Feline leukemia virus (strain C/FS246)
Query: 1 VADTWE 6
V DTWE
Sbjct: 49 VGDTWE 54
>sp|ENV_FLVGL|ENVELOPE glycoprotein|Feline leukemia virus (strain A/Glasgow-1)
Query: 1 VADTWE 6
V DTWE
Sbjct: 81 VGDTWE 86
>sp|Y118_NPVAC|UNCHARACTERIZED 18.7 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 1 VADTWELHRI 10
+AD W + +I
Sbjct: 72 IADKWHIRKI 81
>sp|ENV_FLVSA|ENVELOPE glycoprotein|Feline leukemia virus (strain C/Sarma)
Query: 1 VADTWE 6
V DTWE
Sbjct: 81 VGDTWE 86
>sp|ENV_FSVSM|ENVELOPE glycoprotein|Feline sarcoma virus (strain SM)
Query: 1 VADTWE 6
V DTWE
Sbjct: 84 VGDTWE 89
>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)
Query: 4 TWELHRI 10
TW+LH I
Sbjct: 983 TWQLHTI 989
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VADTWELH 8
VA+ W+LH
Sbjct: 114 VAEEWKLH 121
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VADTWELH 8
VA+ W+LH
Sbjct: 114 VAEEWKLH 121
>sp|GLYCO_TIBVC|GLYCOPROTEIN virus (strain CS132) (TIBV)
Query: 3 DTWELHRI 10
+TWE H I
Sbjct: 205 ETWECHPI 212
21|SequenceR|110|101|LATLQVADTW
>sp|GH_EHV2|ENVELOPE glycoprotein H|Equine herpesvirus 2 (strain 86/87)
Query: 1 LATLQVAD 8
LATLQVAD
Sbjct: 430 LATLQVAD 437
>sp|V42_BPT3|GENE 4.2 protein|Enterobacteria phage T3 (Bacteriophage T3)
Query: 1 LATLQVADTW 10
LATL++ DTW
Sbjct: 50 LATLELLDTW 59
>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain
Query: 1 LATLQVADTW 10
LAT Q DTW
Sbjct: 267 LATTQNWDTW 276
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 2 ATLQVADTW 10
AT+Q D+W
Sbjct: 224 ATIQEGDSW 232
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 ATLQVADTW 10
AT+Q D+W
Sbjct: 224 ATIQEGDSW 232
22|SequenceR|115|106|ESGMVLATLQ
>sp|POLR_NORAV|REPLICATION polyprotein|Nora virus
Query: 1 ESGMVLATL 9
E+GMVLA L
Sbjct: 2009 ENGMVLAPL 2017
23|SequenceR|120|111|QQQLAESGMV
>sp|BP29_BPHC1|PUTATIVE baseplate protein gp29|Haemophilus phage HP1 (strain HP1c1)
Query: 1 QQQLAESGM 9
+Q LAESG+
Sbjct: 6 KQMLAESGL 14
24|SequenceR|125|116|LMALLQQQLA
***** No hits found ******
25|SequenceR|130|121|TVYNVLMALL
>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain
Query: 3 YNVLMALL 10
YN+LMAL+
Sbjct: 1759 YNMLMALV 1766
>sp|POL1_BRSV|RNA1 polyprotein|Beet ringspot virus (BRSV) (Tomato
Query: 3 YNVLMALL 10
YN+LMAL+
Sbjct: 1757 YNMLMALV 1764
>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus
Query: 1 TVYNVLMAL 9
TVYN+L A+
Sbjct: 809 TVYNLLAAV 817
>sp|POLG_SMSV4|GENOME polyprotein|San Miguel sea lion virus
Query: 1 TVYNVLMAL 9
TVYN+L A+
Sbjct: 144 TVYNLLAAV 152
>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus
Query: 1 TVYNVLMAL 9
TVYN+L A+
Sbjct: 809 TVYNLLAAV 817
26|SequenceR|135|126|ARLEKTVYNV
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 ARLEKTVYN 9
ARL ++VYN
Sbjct: 736 ARLRRSVYN 744
>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate
Query: 1 ARLEKTVY 8
A+LE+T+Y
Sbjct: 1449 AKLEQTIY 1456
>sp|GAG_MMTVC|GAG polyprotein|Mouse mammary tumor virus (strain
Query: 1 ARLEKTVYNV 10
+RLE+ VY V
Sbjct: 431 SRLEEAVYRV 440
27|SequenceR|141|131|DDYQIEARLEK
>sp|HEMA_I66A1|HEMAGGLUTININ A virus (strain A/Turkey/Wisconsin/1/1966
Query: 3 YQIEARLEK 11
YQ E+RLE+
Sbjct: 500 YQEESRLER 508
>sp|YR467_MIMIV|UNCHARACTERIZED protein R467|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 DDYQIEARL 9
D+Y+IEA L
Sbjct: 295 DEYEIEAVL 303
>sp|RDRP_FDVS|RNA-DIRECTED RNA polymerase VP1|Fiji disease virus (isolate Sugarcane)
Query: 1 DDYQIEARL 9
+DYQIE++
Sbjct: 638 NDYQIESKF 646
THE END