CS012_HUMAN Blast OutputR
HumanVirus
1|SequenceR|10|1|KMIDEVMITM

>sp|UL24_VZVO|PROTEIN UL24 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 4 DEVMIT 9
DE+M+T
Sbjct: 139 DEIMVT 144


>sp|UL24_VZVD|PROTEIN UL24 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 DEVMIT 9
DE+M+T
Sbjct: 139 DEIMVT 144




2|SequenceR|15|6|LSCLLKMIDE

>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 LSCLLKMIDE 10
LSC+L+M D+
Sbjct: 416 LSCVLRMTDK 425


>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)

Query: 3 CLLKMIDE 10
C+++M+DE
Sbjct: 402 CVIRMLDE 409




3|SequenceR|20|11|KREGSLSCLL

>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG+LSC
Sbjct: 440 REGTLSC 446


>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG LSC
Sbjct: 432 REGELSC 438


>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG LSC
Sbjct: 440 REGELSC 446


>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG LSC
Sbjct: 443 REGELSC 449


>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG LSC
Sbjct: 438 REGELSC 444


>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12

Query: 1 KREGSLSCL 9
+REG L CL
Sbjct: 232 EREGELRCL 240


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2 REGSLSC 8
REG LSC
Sbjct: 307 REGFLSC 313


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 REGSLSC 8
REG LSC
Sbjct: 307 REGFLSC 313


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 REGSLSC 8
REG LSC
Sbjct: 307 REGFLSC 313


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 REGSLSC 8
REG LSC
Sbjct: 307 REGFLSC 313


>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG L+C
Sbjct: 435 REGQLTC 441


>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG L+C
Sbjct: 435 REGQLTC 441


>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG L+C
Sbjct: 432 REGQLTC 438


>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG L+C
Sbjct: 433 REGELTC 439


>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG L+C
Sbjct: 431 REGELTC 437


>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG L+C
Sbjct: 441 REGELTC 447


>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG L+C
Sbjct: 438 REGELAC 444


>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26

Query: 2 REGSLSCL 9
REG++ C+
Sbjct: 47 REGNMQCI 54


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2 REGSLSCL 9
R+GS SC+
Sbjct: 4355 RDGSCSCV 4362


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2 REGSLSCL 9
R+GS SC+
Sbjct: 4393 RDGSCSCV 4400


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2 REGSLSCL 9
R+GS SC+
Sbjct: 4413 RDGSCSCV 4420


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2 REGSLSCL 9
R+GS SC+
Sbjct: 4443 RDGSCSCV 4450


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2 REGSLSCL 9
R+GS SC+
Sbjct: 4355 RDGSCSCV 4362


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2 REGSLSCL 9
R+GS SC+
Sbjct: 4393 RDGSCSCV 4400


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2 REGSLSCL 9
R+GS SC+
Sbjct: 4413 RDGSCSCV 4420


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2 REGSLSCL 9
R+GS SC+
Sbjct: 4443 RDGSCSCV 4450


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 1 KREGSLSC 8
KR+GS+ C
Sbjct: 536 KRKGSMVC 543


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 2 REGSLSCL 9
REG++ C+
Sbjct: 47 REGNMQCI 54


>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12

Query: 1 KREGSLSCL 9
+R GSL C+
Sbjct: 117 QRPGSLQCM 125


>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 REGSLSC 8
REG L C
Sbjct: 433 REGELVC 439


>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 EGSLSCLL 10
EG +CLL
Sbjct: 164 EGETNCLL 171


>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5

Query: 3 EGSLSCL 9
EG L CL
Sbjct: 279 EGELKCL 285


>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2

Query: 3 EGSLSCL 9
EG L CL
Sbjct: 279 EGELKCL 285


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2 REGSLSCL 9
+EGS SC+
Sbjct: 974 KEGSESCI 981


>sp|PG130_VARV|39KDA core protein OPG130|Variola virus

Query: 1 KREGSLSC 8
+ +GS+SC
Sbjct: 164 QSDGSISC 171


>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 KREGSLSC 8
+ +GS+SC
Sbjct: 164 QSDGSISC 171


>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)

Query: 1 KREGSLSC 8
+ +GS+SC
Sbjct: 174 QSDGSISC 181


>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4

Query: 3 EGSLSCL 9
EG L CL
Sbjct: 258 EGKLRCL 264


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 KREGSLSC 8
KR G SC
Sbjct: 190 KRHGDKSC 197




4|SequenceR|25|16|VAAKMKREGS

>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 MKREGS 10
MKREGS
Sbjct: 277 MKREGS 282


>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 MKREGS 10
MKREGS
Sbjct: 277 MKREGS 282


>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn

Query: 1 VAAKMK 6
VAAKMK
Sbjct: 278 VAAKMK 283


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 VAAKMKREG 9
+ KM+REG
Sbjct: 648 ICEKMEREG 656


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 VAAKMKREG 9
+ KM+REG
Sbjct: 647 ICEKMEREG 655


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 VAAKMKREG 9
+ KM+REG
Sbjct: 648 ICEKMEREG 656


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 VAAKMKREG 9
+ KM+REG
Sbjct: 647 ICEKMEREG 655


>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)

Query: 4 KMKREG 9
K+KREG
Sbjct: 706 KLKREG 711


>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)

Query: 1 VAAKMK 6
+AAKMK
Sbjct: 289 IAAKMK 294




5|SequenceR|30|21|KGSHKVAAKM

***** No hits found ******


6|SequenceR|35|26|TVLAGKGSHK

>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P

Query: 1 TVLAGKGSH 9
+++AG+G+H
Sbjct: 266 SIIAGQGTH 274


>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 GKGSHK 10
G+GSH+
Sbjct: 282 GRGSHR 287


>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 GKGSHK 10
G+GSH+
Sbjct: 282 GRGSHR 287


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 5 GKGSH 9
GKGSH
Sbjct: 716 GKGSH 720


>sp|PG128_VACCC|PROTEIN OPG128|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 TVLAGKGSH 9
T+LA G+H
Sbjct: 27 TILAEDGNH 35


>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945

Query: 2 VLAGKGS 8
V+AGKG+
Sbjct: 74 VVAGKGT 80


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 3 LAGKGSH 9
++GKG H
Sbjct: 1032 VSGKGGH 1038


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 3 LAGKGSH 9
++GKG H
Sbjct: 1032 VSGKGGH 1038


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 3 LAGKGSH 9
++GKG H
Sbjct: 1031 VSGKGGH 1037




7|SequenceR|40|31|FAMAGTVLAG

>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 MAGTVLAG 10
+AG V+AG
Sbjct: 110 LAGVVMAG 117


>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus

Query: 3 MAGTVLAG 10
+AG ++AG
Sbjct: 110 LAGVIMAG 117


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1 FAMAGTV 7
FA+AG+V
Sbjct: 1381 FALAGSV 1387




8|SequenceR|45|36|VLGGVFAMAG

>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 1 VLGGVF 6
V+GGVF
Sbjct: 152 VIGGVF 157


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 1 VLGGVF 6
V+GGVF
Sbjct: 152 VIGGVF 157


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 1 VLGGVF 6
V+GGVF
Sbjct: 152 VIGGVF 157


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 VLGGVF 6
V+GGVF
Sbjct: 152 VIGGVF 157


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 VLGGVF 6
V+GGVF
Sbjct: 144 VIGGVF 149


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 1 VLGGVF 6
V+GGVF
Sbjct: 152 VIGGVF 157


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 1 VLGGVF 6
V+GGVF
Sbjct: 152 VIGGVF 157


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 1 VLGGVF 6
V+GGVF
Sbjct: 152 VIGGVF 157


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 1 VLGGVF 6
V+GGVF
Sbjct: 152 VIGGVF 157


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 2 LGGVFAMA 9
+GG+FA A
Sbjct: 700 IGGMFAPA 707




9|SequenceR|50|41|GPPGGVLGGV

>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 PPGGVLGG 9
PPGG++G
Sbjct: 442 PPGGLVGA 449


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 2 PPGGV 6
PPGG+
Sbjct: 294 PPGGI 298


>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 2 PPGGV 6
PPGG+
Sbjct: 294 PPGGI 298


>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 2 PPGGV 6
PPGG+
Sbjct: 294 PPGGI 298


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 2 PPGGV 6
PPGG+
Sbjct: 294 PPGGI 298


>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16

Query: 2 PPGGVL 7
PPGG L
Sbjct: 409 PPGGTL 414


>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)

Query: 4 GGVLGGV 10
GGV GGV
Sbjct: 386 GGVTGGV 392


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 1 GPPGGVLG 8
G PG V+G
Sbjct: 869 GDPGDVMG 876


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 1 GPPGGVLG 8
G PG V+G
Sbjct: 868 GDPGDVMG 875


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 1 GPPGGVLG 8
G PG V+G
Sbjct: 868 GDPGDVMG 875


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 4 GGVLGGV 10
GGV+GG+
Sbjct: 1246 GGVMGGL 1252


>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985

Query: 4 GGVLGGV 10
GG++GG+
Sbjct: 30 GGMVGGI 36


>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981

Query: 4 GGVLGGV 10
GG++GG+
Sbjct: 30 GGMVGGI 36


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 4 GGVLGG 9
GG++GG
Sbjct: 175 GGIIGG 180


>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)

Query: 2 PPGGVL 7
PPGG +
Sbjct: 623 PPGGAV 628


>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)

Query: 2 PPGGVLGG 9
PPGG+ G
Sbjct: 598 PPGGLDAG 605


>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2

Query: 2 PPGGVLGG 9
PPG GG
Sbjct: 393 PPGFYTGG 400


>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 PPGGVLGG 9
PPGG G
Sbjct: 444 PPGGTRPG 451


>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5

Query: 2 PPGGVLGG 9
PPG GG
Sbjct: 393 PPGFYTGG 400


>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 PPGGVLGG 9
PPGG G
Sbjct: 444 PPGGTRPG 451


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 4 GGVLGG 9
GGV GG
Sbjct: 178 GGVTGG 183




10|SequenceR|55|46|GGVALGPPGG

>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus

Query: 2 GVALGPP 8
G+A+GPP
Sbjct: 442 GIAIGPP 448


>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1

Query: 1 GGVALGPPGG 10
G + GPPGG
Sbjct: 59 GRLRRGPPGG 68


>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 VALGPPGG 10
++LGPP G
Sbjct: 65 LSLGPPKG 72


>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 GVALGPPGG 10
G GPPGG
Sbjct: 6 GKEAGPPGG 14


>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 GVALGPPGG 10
G GPPGG
Sbjct: 6 GKEAGPPGG 14


>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 GVALGPPGG 10
G GPPGG
Sbjct: 6 GKEAGPPGG 14


>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 VALGPPGG 10
++LGPP G
Sbjct: 65 LSLGPPKG 72


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1 GGVALGPPGG 10
G LGPP G
Sbjct: 284 GDSILGPPSG 293


>sp|ORF52_HHV8P|TEGUMENT protein ORF52|Human herpesvirus 8 type P

Query: 1 GGVALGPPGG 10
GG A PPG
Sbjct: 105 GGTAKPPPGA 114


>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 VALGPP 8
+A+GPP
Sbjct: 443 IAVGPP 448


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 1 GGVALG 6
GG+ALG
Sbjct: 754 GGIALG 759


>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 2 GVALGP 7
G+A+GP
Sbjct: 301 GIAIGP 306


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 GVALGPPGG 10
G+A PP G
Sbjct: 6043 GIAARPPPG 6051


>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1

Query: 1 GGVALGPPG 9
G + GPPG
Sbjct: 59 GRLRRGPPG 67


>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 GVALGPP 8
GVALG P
Sbjct: 526 GVALGRP 532


>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 GVALGPP 8
GVALG P
Sbjct: 526 GVALGRP 532


>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 GVALGPP 8
GVALG P
Sbjct: 526 GVALGRP 532




11|SequenceR|60|51|LGGVAGGVAL

>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)

Query: 2 GGVAGGV 8
GGV GGV
Sbjct: 386 GGVTGGV 392


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1 LGGVAGGVA 9
LGG GGVA
Sbjct: 140 LGGPLGGVA 148


>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain

Query: 1 LGGVAGGVAL 10
GGV G +AL
Sbjct: 111 FGGVIGTIAL 120


>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48

Query: 1 LGGVAGG 7
+GGV+GG
Sbjct: 148 VGGVSGG 154


>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)

Query: 1 LGGVAGG 7
LGG+ GG
Sbjct: 345 LGGIKGG 351


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 LGGVAGGV 8
LGGV GG+
Sbjct: 1245 LGGVMGGL 1252


>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)

Query: 1 LGGVAGG 7
LGG+ GG
Sbjct: 345 LGGIKGG 351


>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)

Query: 1 LGGVAGG 7
LGG+ GG
Sbjct: 345 LGGIKGG 351


>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong

Query: 1 LGGVAGG 7
LGG+ GG
Sbjct: 345 LGGIKGG 351


>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)

Query: 1 LGGVAGG 7
LGG+ GG
Sbjct: 345 LGGIKGG 351


>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 2 GGVAGGV 8
GVAGG+
Sbjct: 328 AGVAGGI 334


>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 2 GGVAGGV 8
GVAGG+
Sbjct: 328 AGVAGGI 334


>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 2 GGVAGGV 8
GVAGG+
Sbjct: 328 AGVAGGI 334


>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2

Query: 3 GVAGGV 8
G+AGGV
Sbjct: 325 GIAGGV 330


>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 3 GVAGGV 8
G+AGGV
Sbjct: 332 GIAGGV 337


>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 3 GVAGGV 8
G+AGGV
Sbjct: 330 GIAGGV 335


>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 GGVAGGV 8
GG AGGV
Sbjct: 162 GGCAGGV 168


>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985

Query: 1 LGGVAGGVA 9
+GG+ GG+
Sbjct: 29 VGGMVGGIG 37


>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981

Query: 1 LGGVAGGVA 9
+GG+ GG+
Sbjct: 29 VGGMVGGIG 37


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1 LGGVAGGVAL 10
LG +AG VAL
Sbjct: 1301 LGFIAGLVAL 1310


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 2 GGVAGGVAL 10
G + GG+AL
Sbjct: 750 GSLIGGIAL 758


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 LGGVAGGVA 9
+GG GGVA
Sbjct: 140 VGGPVGGVA 148


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 LGGVAGGVA 9
+GG GGVA
Sbjct: 140 IGGPLGGVA 148


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 2 GGVAGG 7
GGV GG
Sbjct: 178 GGVTGG 183


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 LGGVAGGV 8
L G+AGG+
Sbjct: 3022 LHGLAGGI 3029


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 LGGVAGGV 8
L G+AGG+
Sbjct: 2934 LHGLAGGI 2941


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 1 LGGVAG 6
LGGV+G
Sbjct: 898 LGGVSG 903


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 1 LGGVAG 6
LGGV+G
Sbjct: 898 LGGVSG 903


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 1 LGGVAG 6
LGGV+G
Sbjct: 898 LGGVSG 903


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 1 LGGVAG 6
LGGV+G
Sbjct: 898 LGGVSG 903


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 1 LGGVAG 6
LGGV+G
Sbjct: 898 LGGVSG 903


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 1 LGGVAG 6
LGGV+G
Sbjct: 898 LGGVSG 903


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 1 LGGVAG 6
LGGV+G
Sbjct: 898 LGGVSG 903


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 1 LGGVAG 6
LGGV+G
Sbjct: 899 LGGVSG 904


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 1 LGGVAG 6
LGGV+G
Sbjct: 898 LGGVSG 903


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 1 LGGVAG 6
LGGV+G
Sbjct: 898 LGGVSG 903


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 LGGVAG 6
LGGV+G
Sbjct: 899 LGGVSG 904


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1 LGGVAGGVA 9
+GG GGVA
Sbjct: 140 VGGPLGGVA 148


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 LGGVAGGV 8
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1 LGGVAGGV 8
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 LGGVAGGV 8
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 LGGVAGGV 8
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 LGGVAGGV 8
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 2 GGVAGGVAL 10
GGV G VAL
Sbjct: 1137 GGVPGIVAL 1145


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2 GGVAGGVAL 10
GGV G VAL
Sbjct: 1137 GGVPGIVAL 1145


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 2 GGVAGGVAL 10
GGV G VAL
Sbjct: 1137 GGVPGIVAL 1145


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2 GGVAGGVAL 10
GGV G VAL
Sbjct: 1137 GGVPGIVAL 1145


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1 LGGVAGGV 8
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1 LGGVAGGV 8
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 LGGVAGGV 8
LGG+ GG+
Sbjct: 1245 LGGMMGGL 1252




12|SequenceR|65|56|MWAGLLGGVA

>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1149 WAPLLGG 1155


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1149 WAPLLGG 1155


>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5

Query: 1 MWAGLLG 7
MW G+LG
Sbjct: 224 MWPGVLG 230


>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2

Query: 1 MWAGLLG 7
MW G+LG
Sbjct: 223 MWPGVLG 229


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 2 WAGLLGG 8
WA L+GG
Sbjct: 1003 WASLMGG 1009


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 2 WAGLLGG 8
WA L+GG
Sbjct: 1003 WASLMGG 1009


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 2 WAGLLGG 8
WA L+GG
Sbjct: 1003 WASLMGG 1009


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2 WAGLLGG 8
WA +LGG
Sbjct: 1119 WAHILGG 1125


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1003 WASLLGG 1009


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 2 WAGLLGG 8
WA LLGG
Sbjct: 1003 WASLLGG 1009


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 2 WAGLLGG 8
W G+ GG
Sbjct: 177 WGGVTGG 183


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 WAGLLGGVA 10
W +L G+A
Sbjct: 6037 WGNMLTGIA 6045


>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 WAGLLGGV 9
W+G GG+
Sbjct: 385 WSGAAGGM 392


>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 WAGLLGGV 9
W+G GG+
Sbjct: 385 WSGAAGGM 392


>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 WAGLLGGV 9
W+G GG+
Sbjct: 385 WSGAAGGM 392


>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 MWAGLLGGV 9
M AG+ GG+
Sbjct: 326 MGAGMAGGI 334


>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 MWAGLLGGV 9
M AG+ GG+
Sbjct: 326 MGAGMAGGI 334


>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 MWAGLLGG 8
+++GL+GG
Sbjct: 388 VYSGLIGG 395


>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12

Query: 2 WAGLLG 7
W GL+G
Sbjct: 274 WKGLVG 279


>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 MWAGLLGG 8
+++GL+GG
Sbjct: 388 VYSGLIGG 395


>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 MWAGLLGG 8
+++GL+GG
Sbjct: 388 VYSGLIGG 395


>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain

Query: 4 GLLGGVA 10
GL+GG++
Sbjct: 269 GLVGGIS 275


>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain

Query: 4 GLLGGVA 10
GL+GG++
Sbjct: 265 GLVGGIS 271


>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains

Query: 4 GLLGGVA 10
GL+GG++
Sbjct: 265 GLVGGIS 271


>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 MWAGLLGGV 9
M AG+ GG+
Sbjct: 326 MGAGVAGGI 334


>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)

Query: 3 AGLLGGV 9
AGL+GG+
Sbjct: 85 AGLVGGI 91


>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)

Query: 3 AGLLGGV 9
AGL+GG+
Sbjct: 85 AGLVGGI 91


>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)

Query: 3 AGLLGGV 9
AGL+GG+
Sbjct: 85 AGLVGGI 91


>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 MWAGLLGGV 9
M AG+ GG+
Sbjct: 326 MGAGVAGGI 334




13|SequenceR|70|61|FQGSTMWAGL

>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I82A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Camel/Mongolia/1982

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 12 QGQTLWSKM 20


>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933

Query: 2 QGSTMWAGL 10
QG T+W+ +
Sbjct: 73 QGQTLWSKM 81


>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 FQGSTMWAG 9
+ GS+ W G
Sbjct: 375 YNGSSAWGG 383


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1 FQGSTMW 7
FQG T+W
Sbjct: 1853 FQGKTVW 1859


>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 72 QGQTLWS 78


>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 65 QGQTLWS 71


>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 67 QGQTLWS 73


>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 66 QGQTLWS 72


>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956

Query: 2 QGSTMWA 8
QG T+W+
Sbjct: 73 QGQTLWS 79


>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)

Query: 3 GSTMWAGL 10
G+ +W+GL
Sbjct: 467 GTHLWSGL 474


>sp|CAP6_ADE12|PRE-PROTEIN VI|Human adenovirus A serotype 12

Query: 1 FQGSTMWAGL 10
F +++W+GL
Sbjct: 35 FNWNSIWSGL 44


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 GSTMWAGL 10
GST+ AGL
Sbjct: 2961 GSTLQAGL 2968


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3 GSTMWAGL 10
GST+ AGL
Sbjct: 2961 GSTLQAGL 2968


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 2 QGSTMWAGL 10
+GS+ W L
Sbjct: 877 EGSSFWTSL 885


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 FQGSTMW 7
+QG T+W
Sbjct: 1828 YQGKTVW 1834


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 FQGSTMW 7
+QG T+W
Sbjct: 1828 YQGKTVW 1834


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 FQGSTMW 7
+QG T+W
Sbjct: 1828 YQGKTVW 1834


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 FQGSTMW 7
+QG T+W
Sbjct: 1828 YQGKTVW 1834


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 FQGSTMW 7
+QG T+W
Sbjct: 1828 YQGKTVW 1834


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 FQGSTMW 7
F+G T+W
Sbjct: 1419 FKGKTVW 1425


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 FQGSTMW 7
F+G T+W
Sbjct: 1829 FKGKTVW 1835


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 1 FQGSTMW 7
F+G T+W
Sbjct: 1829 FKGKTVW 1835


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 FQGSTMW 7
F+G T+W
Sbjct: 1829 FKGKTVW 1835


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 FQGSTMW 7
F+G T+W
Sbjct: 1829 FKGKTVW 1835


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 FQGSTMW 7
F+G T+W
Sbjct: 1829 FKGKTVW 1835


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 FQGSTMW 7
F+G T+W
Sbjct: 1829 FKGKTVW 1835


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 FQGSTMW 7
F+G T+W
Sbjct: 1829 FKGKTVW 1835


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 FQGSTMWAGL 10
FQ +WA L
Sbjct: 1266 FQSHQLWATL 1275


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 FQGSTMWAGL 10
FQ +WA L
Sbjct: 1267 FQSHQLWATL 1276


>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6

Query: 2 QGSTMW 7
QG+T W
Sbjct: 327 QGNTTW 332


>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus

Query: 3 GSTMWAGL 10
G+T W GL
Sbjct: 161 GATSWGGL 168




14|SequenceR|75|66|QPVPKFQGST

>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 2 PVPKFQG 8
PVP+FQ
Sbjct: 615 PVPEFQA 621


>sp|NS1_I07A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 2 PVPKFQGST 10
P+P F G T
Sbjct: 162 PLPSFPGHT 170


>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26

Query: 3 VPKFQGST 10
+PK +GST
Sbjct: 32 IPKIEGST 39


Query: 2 PVPKFQG 8
P+P F G
Sbjct: 119 PIPTFSG 125


>sp|NS1_I73A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Port

Query: 2 PVPKFQGST 10
P+P F G T
Sbjct: 162 PLPSFPGHT 170


>sp|NS1_I72A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Udorn/307/1972

Query: 2 PVPKFQGST 10
P+P F G T
Sbjct: 162 PLPSFPGHT 170


>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69

Query: 3 VPKFQGST 10
+PK +GST
Sbjct: 32 IPKIEGST 39


>sp|NS1_I80A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/4/1980

Query: 2 PVPKFQGST 10
P+P F G T
Sbjct: 162 PLPSFPGHT 170


>sp|NS1_I83A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong

Query: 2 PVPKFQGST 10
P+P F G T
Sbjct: 162 PLPSFPGHT 170


>sp|NS1_I89A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/352/1989

Query: 2 PVPKFQGST 10
P+P F G T
Sbjct: 162 PLPSFPGHT 170


>sp|NS1_I77A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 2 PVPKFQGST 10
P+P F G T
Sbjct: 162 PLPSFPGHT 170


>sp|NS1_I76A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/110/1976

Query: 2 PVPKFQGST 10
P+P F G T
Sbjct: 162 PLPSFPGHT 170


>sp|NS1_I75A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/39/1975

Query: 2 PVPKFQGST 10
P+P F G T
Sbjct: 162 PLPSFPGHT 170


>sp|NS1_I72A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/101/1972

Query: 2 PVPKFQGST 10
P+P F G T
Sbjct: 162 PLPSFPGHT 170


>sp|NS1_I72A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/102/1972

Query: 2 PVPKFQGST 10
P+P F G T
Sbjct: 162 PLPSFPGHT 170


>sp|TAT_HV1MN|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 1 QPVPKFQGS 9
QP P+F+G
Sbjct: 72 QPAPQFRGD 80


>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39

Query: 2 PVPKFQGST 10
PVP F G++
Sbjct: 118 PVPTFTGTS 126


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 2 PVPKFQG 8
P P FQG
Sbjct: 1348 PPPVFQG 1354


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 2 PVPKFQG 8
PVP FQ
Sbjct: 614 PVPDFQA 620


>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180

Query: 2 PVPKFQGST 10
PVP F G++
Sbjct: 118 PVPTFTGTS 126


>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33

Query: 3 VPKFQGST 10
+PK +GST
Sbjct: 32 IPKVEGST 39


>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45

Query: 2 PVPKFQGST 10
PVP F G++
Sbjct: 118 PVPTFTGTS 126


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 4 PKFQG 8
PKFQG
Sbjct: 337 PKFQG 341


>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)

Query: 1 QPVPKF 6
QPVP++
Sbjct: 184 QPVPEY 189


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 PVPKFQG 8
P+P FQ
Sbjct: 611 PIPDFQA 617


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 PVPKFQG 8
P+P FQ
Sbjct: 611 PIPDFQA 617


>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70

Query: 2 PVPKFQGST 10
P+P F G++
Sbjct: 118 PIPTFTGTS 126


>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51

Query: 1 QPVPKFQGS 9
P+P F G+
Sbjct: 118 SPIPTFTGT 126


>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18

Query: 3 VPKFQGST 10
VPK +G+T
Sbjct: 32 VPKVEGTT 39


>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C

Query: 1 QPVPKFQGST 10
PVPK + +T
Sbjct: 170 DPVPKMENTT 179


>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)

Query: 1 QPVPKF 6
QPVP F
Sbjct: 1161 QPVPVF 1166




15|SequenceR|80|71|LEMLIQPVPK

>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 2 EMLIQPVPK 10
+MLIQP PK
Sbjct: 285 QMLIQP-PK 292


>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 EMLIQPVPK 10
EM+++ VPK
Sbjct: 5 EMMVRDVPK 13


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 5 IQPVPK 10
I+P+PK
Sbjct: 1842 IKPIPK 1847




16|SequenceR|85|76|QEAPPLEMLI

>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35

Query: 2 EAPPLEML 9
E PPLE+L
Sbjct: 184 ECPPLELL 191


>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 414 QERPPLE 420


>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 414 QERPPLE 420


>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 414 QERPPLE 420


>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 414 QERPPLE 420


>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34

Query: 2 EAPPLEM 8
E PPLE+
Sbjct: 207 ECPPLEL 213


>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 414 QERPPLE 420


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 QEAPPLEML 9
++APPL +L
Sbjct: 202 EKAPPLSLL 210


>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2

Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 410 QERPPLE 416


>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 415 QERPPLE 421


>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 417 QERPPLE 423


>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 QEAPPLE 7
QE PPLE
Sbjct: 414 QERPPLE 420


>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 184 DCPPLELM 191


>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2

Query: 2 EAPPLE 7
EAPPLE
Sbjct: 34 EAPPLE 39


>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 183 DCPPLELI 190


>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5

Query: 2 EAPPLE 7
EAPPLE
Sbjct: 34 EAPPLE 39


>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 211 DCPPLELI 218


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 1 QEAPPLE 7
EAPPLE
Sbjct: 2468 NEAPPLE 2474


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 5 PLEMLI 10
PLEML+
Sbjct: 1009 PLEMLL 1014


>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 181 DCPPLELI 188


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 180 DCPPLELI 187


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 180 DCPPLELI 187


>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37

Query: 2 EAPPLEM 8
+ PPLE+
Sbjct: 185 QCPPLEL 191


>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 184 DCPPLELI 191


>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 185 KCPPLELI 192


>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 184 DCPPLELI 191


>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 181 DCPPLELI 188


>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 183 DCPPLELV 190


>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 183 DCPPLELI 190


>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 184 DCPPLELI 191


>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 211 DCPPLELI 218


>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 183 DCPPLELV 190


>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 184 DCPPLELV 191


>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 182 DCPPLELV 189


>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58

Query: 2 EAPPLEML 9
+ PPLE+
Sbjct: 210 DCPPLELF 217


>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 184 DCPPLELV 191


>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62

Query: 2 EAPPLE 7
E PPLE
Sbjct: 183 ECPPLE 188


>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67

Query: 4 PPLEML 9
PPLE++
Sbjct: 216 PPLELM 221


>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 180 DCPPLELV 187


>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 182 DCPPLELI 189


>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 183 DCPPLELV 190


>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31

Query: 2 EAPPLEM 8
+ PPLE+
Sbjct: 185 DCPPLEL 191


>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 181 DCPPLELI 188


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1 QEAPPLEML 9
QEA PL++
Sbjct: 999 QEAAPLDVF 1007


>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42

Query: 2 EAPPLEM 8
+ PPLE+
Sbjct: 181 DCPPLEL 187


>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 181 DCPPLELI 188


>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30

Query: 2 EAPPLEML 9
+ PPLE++
Sbjct: 191 DCPPLELV 198




17|SequenceR|90|81|NFLRQQEAPP

>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)

Query: 2 FLRQQEAPP 10
FLR QE PP
Sbjct: 519 FLRYQELPP 527


>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)

Query: 2 FLRQQEAPP 10
FLR QE PP
Sbjct: 519 FLRYQELPP 527


>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)

Query: 2 FLRQQEAPP 10
FLR QE PP
Sbjct: 519 FLRYQELPP 527


>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)

Query: 2 FLRQQEAPP 10
FLR QE PP
Sbjct: 519 FLRYQELPP 527


>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)

Query: 2 FLRQQEAPP 10
FLR QE PP
Sbjct: 519 FLRYQELPP 527


>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P

Query: 1 NFLRQQEAP 9
+FLR+ E P
Sbjct: 73 DFLREMETP 81


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 5 QQEAPP 10
+QEAPP
Sbjct: 1235 EQEAPP 1240


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 NFLRQQEAPP 10
+ Q+EAPP
Sbjct: 3023 TYTVQKEAPP 3032


>sp|YEC4_EBVB9|UNCHARACTERIZED protein EC-RF4|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 RQQEAP 9
RQQ+AP
Sbjct: 81 RQQDAP 86


>sp|UL110_HCMVA|UNCHARACTERIZED protein UL110|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 RQQEAPP 10
+QQ APP
Sbjct: 22 KQQTAPP 28


>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12

Query: 1 NFL---RQQEAPP 10
NFL R+Q+ PP
Sbjct: 306 NFLLTNRRQQVPP 318




18|SequenceR|95|86|IAAAENFLRQ

>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 IAAAENFLRQ 10
IAAAE ++RQ
Sbjct: 178 IAAAEVYVRQ 187


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 3 AAENFLRQ 10
A +NF+RQ
Sbjct: 1840 AVDNFMRQ 1847


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 3 AAENFLRQ 10
A +NF+RQ
Sbjct: 1839 AVDNFMRQ 1846


>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5 ENFLRQ 10
ENFL+Q
Sbjct: 149 ENFLKQ 154


>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)

Query: 5 ENFLRQ 10
ENFL+Q
Sbjct: 151 ENFLKQ 156


>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human

Query: 5 ENFLRQ 10
ENFL+Q
Sbjct: 151 ENFLKQ 156


>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 AENFLRQ 10
A NFLR+
Sbjct: 239 ANNFLRE 245


>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)

Query: 5 ENFLRQ 10
ENFL+Q
Sbjct: 147 ENFLKQ 152


>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 1 IAAAENFLR 9
+ AA+NFL+
Sbjct: 1446 VQAAQNFLQ 1454


>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)

Query: 5 ENFLRQ 10
ENFL+Q
Sbjct: 147 ENFLKQ 152


>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)

Query: 5 ENFLRQ 10
ENFL+Q
Sbjct: 147 ENFLKQ 152




19|SequenceR|100|91|ELHRIIAAAE

>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)

Query: 1 ELHRIIAAA 9
E+HRI+A+A
Sbjct: 599 EMHRILASA 607


>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13

Query: 1 ELHRIIAAAE 10
ELH ++AAA+
Sbjct: 336 ELHPLVAAAQ 345


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 2 LHRIIAAA 9
LHR +AAA
Sbjct: 56 LHRSLAAA 63


>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11

Query: 1 ELHRIIAA 8
ELH ++AA
Sbjct: 333 ELHPLVAA 340


>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b

Query: 1 ELHRIIAAAE 10
E+H ++AA +
Sbjct: 334 EMHPLVAAQD 343


>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a

Query: 1 ELHRIIAAAE 10
E+H ++AA +
Sbjct: 334 EMHPLVAAQD 343




20|SequenceR|105|96|VADTWELHRI

>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)

Query: 1 VADTWELHR 9
V+++WE HR
Sbjct: 371 VSESWEAHR 379


>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42

Query: 1 VADTWELH 8
V D WE+H
Sbjct: 181 VTDQWEVH 188


>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)

Query: 1 VADTWELHR 9
V +WE HR
Sbjct: 369 VRQSWEAHR 377


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 5 WELHRI 10
WE+H I
Sbjct: 174 WEIHHI 179


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 WELHRI 10
WE+H I
Sbjct: 174 WEIHHI 179


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 WELHRI 10
WE+H I
Sbjct: 174 WEIHHI 179


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 4 TWELHRI 10
TW +H++
Sbjct: 1222 TWHMHKL 1228


>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 VADTWELH 8
VA+ W+LH
Sbjct: 114 VAEEWKLH 121


>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 VADTWELH 8
VA+ W+LH
Sbjct: 114 VAEEWKLH 121


>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a

Query: 1 VADTWELH 8
V TWE+H
Sbjct: 182 VTGTWEVH 189


>sp|UL140_HCMVM|PROTEIN UL140|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 DTWELHR 9
D+W+LH+
Sbjct: 183 DSWQLHQ 189


>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)

Query: 5 WELHRI 10
WEL+R+
Sbjct: 117 WELYRM 122


>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)

Query: 5 WELHRI 10
WEL+R+
Sbjct: 126 WELYRM 131


>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)

Query: 5 WELHRI 10
WEL+R+
Sbjct: 126 WELYRM 131


>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)

Query: 5 WELHRI 10
WEL+R+
Sbjct: 126 WELYRM 131


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1 VADTWELH 8
V+D+++LH
Sbjct: 1577 VSDSYDLH 1584


>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27

Query: 1 VADTWELH 8
V TWE+H
Sbjct: 182 VTGTWEVH 189


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 WELHRI 10
W LHR+
Sbjct: 2321 WPLHRV 2326


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 5 WELHRI 10
W LH++
Sbjct: 1230 WHLHKV 1235


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 5 WELHRI 10
W LH++
Sbjct: 1229 WHLHKV 1234


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 5 WELHRI 10
W LH++
Sbjct: 1229 WHLHKV 1234


>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53

Query: 4 TWELH 8
TWE+H
Sbjct: 183 TWEVH 187


>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18

Query: 4 TWELH 8
TWE+H
Sbjct: 188 TWEVH 192


>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30

Query: 4 TWELH 8
TWE+H
Sbjct: 183 TWEVH 187


>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 ADTWELH 8
+TW LH
Sbjct: 51 GETWTLH 57


>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 ADTWELH 8
+TW LH
Sbjct: 51 GETWTLH 57


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 WELHRI 10
W LHR+
Sbjct: 2321 WPLHRM 2326


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 WELHRI 10
W LHR+
Sbjct: 2321 WPLHRM 2326


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 WELHRI 10
W LHR+
Sbjct: 2321 WPLHRM 2326


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 5 WELHRI 10
W LHR+
Sbjct: 2321 WPLHRM 2326


>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)

Query: 1 VADTWELHR 9
+ +WEL++
Sbjct: 509 IISSWELYK 517


>sp|PHOSP_VSIVG|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 1 VADTWELHR 9
V+D W L +
Sbjct: 194 VSDVWSLSK 202


>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB

Query: 5 WELHR 9
W++HR
Sbjct: 213 WQVHR 217


>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep

Query: 5 WELHR 9
W++HR
Sbjct: 213 WQVHR 217


>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)

Query: 5 WELHR 9
W++HR
Sbjct: 213 WQVHR 217


>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 1 VADTWELHR 9
V+D W L +
Sbjct: 194 VSDVWSLSK 202


>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi

Query: 5 WELHR 9
W++HR
Sbjct: 213 WQVHR 217


>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 1 VADTWELHR 9
V+D W L +
Sbjct: 194 VSDVWSLSK 202


>sp|PHOSP_VSIVM|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 1 VADTWELHR 9
V+D W L +
Sbjct: 194 VSDVWSLSK 202




21|SequenceR|110|101|LATLQVADTW

>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka

Query: 2 ATLQVADTW 10
AT+Q D+W
Sbjct: 224 ATIQEGDSW 232


>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)

Query: 2 ATLQVADTW 10
AT+Q D+W
Sbjct: 224 ATIQEGDSW 232


>sp|VE6_HPV34|PROTEIN E6|Human papillomavirus type 34

Query: 5 QVADTW 10
Q+AD W
Sbjct: 128 QIADQW 133


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 ATLQVADTW 10
A Q+A+ W
Sbjct: 498 ALAQIAEAW 506


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 ATLQVADTW 10
A Q+A+ W
Sbjct: 498 ALAQIAEAW 506


>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 4 LQVADTW 10
LQ+A+ W
Sbjct: 148 LQIAEHW 154


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 ATLQVADTW 10
A Q+A+ W
Sbjct: 497 ALAQIAEAW 505




22|SequenceR|115|106|ESGMVLATLQ

>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 GMVLATL 9
G+VLATL
Sbjct: 1236 GLVLATL 1242


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 2 SGMVLATLQ 10
+ MVLATL
Sbjct: 2385 TAMVLATLH 2393


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 2 SGMVLATLQ 10
+ MVLATL
Sbjct: 2385 TAMVLATLH 2393


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2 SGMVLATLQ 10
+ MVLATL
Sbjct: 2385 TAMVLATLH 2393


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 GMVLATL 9
G+VLAT+
Sbjct: 1236 GLVLATI 1242


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 GMVLATL 9
G+VLAT+
Sbjct: 1237 GLVLATI 1243


>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 GMVLATL 9
G+VLAT+
Sbjct: 1236 GLVLATI 1242


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 GMVLATL 9
G+VLAT+
Sbjct: 1236 GLVLATI 1242


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3 GMVLATL 9
G+VLAT+
Sbjct: 1237 GLVLATI 1243




23|SequenceR|120|111|QQQLAESGMV

>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 QQLAESGMV 10
QQL +SG+V
Sbjct: 870 QQLVKSGIV 878


>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 QQLAESGMV 10
QQL +SG+V
Sbjct: 870 QQLVKSGIV 878


>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 QQLAESGMV 10
QQL +SG+V
Sbjct: 870 QQLVKSGIV 878


>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)

Query: 1 QQQLAESGMV 10
QQQ SG+V
Sbjct: 356 QQQYLRSGIV 365


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 3 QLAESG 8
QLAESG
Sbjct: 885 QLAESG 890




24|SequenceR|125|116|LMALLQQQLA

***** No hits found ******


25|SequenceR|130|121|TVYNVLMALL

>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2 VYNVLMALL 10
+YN++ ALL
Sbjct: 661 LYNIIKALL 669


>sp|YVFA_VACCC|UNCHARACTERIZED 7.1 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 TVYNVLMA 8
T YN+L+A
Sbjct: 38 TTYNLLLA 45




26|SequenceR|135|126|ARLEKTVYNV

>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)

Query: 1 ARLEKTVYN 9
ARL ++VYN
Sbjct: 736 ARLRRSVYN 744


>sp|E4RF5_ADE02|EARLY 4 ORF6/7 control protein|Human adenovirus C serotype 2

Query: 1 ARLEKTVYNV 10
+R E+TVY+V
Sbjct: 128 SRGERTVYSV 137


>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)

Query: 2 RLEKTVYN 9
R+EK YN
Sbjct: 89 RIEKVYYN 96


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 ARLEKTVYNV 10
AR+ +T+YN+
Sbjct: 489 ARILQTLYNL 498


>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41

Query: 2 RLEKTV 7
RLEKTV
Sbjct: 85 RLEKTV 90


>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54

Query: 3 LEKTVYN 9
L+KTVY+
Sbjct: 82 LQKTVYS 88


>sp|UL92_HHV8P|PROTEIN ORF31|Human herpesvirus 8 type P

Query: 5 KTVYN 9
KTVYN
Sbjct: 158 KTVYN 162


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4 EKTVYNV 10
E+T+YN+
Sbjct: 4452 EETIYNL 4458


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4 EKTVYNV 10
E+T+YN+
Sbjct: 4475 EETIYNL 4481




27|SequenceR|141|131|DDYQIEARLEK

>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 DDYQIEARLEK 11
DD Q+E +E+
Sbjct: 518 DDVQVEIDVEQ 528


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 DDYQIEARLEK 11
DD Q+E +E+
Sbjct: 518 DDVQVEIDVEQ 528


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 DDYQIEARLEK 11
DD Q+E +E+
Sbjct: 518 DDVQVEIDVEQ 528


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 DDYQIEARLEK 11
DD Q+E +E+
Sbjct: 518 DDIQVEIDVEQ 528




THE END